BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018514
(354 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 444 bits (1141), Expect = e-125, Method: Compositional matrix adjust.
Identities = 211/329 (64%), Positives = 261/329 (79%), Gaps = 13/329 (3%)
Query: 20 PEEMNDMKIRDDKEMEATVVDGNGTEAGHIIVTTIGGKNGQPKQTISYMAERVVGHGSFG 79
P MK+ DK+ G++ ++ T G+ Q +SY +V+G+GSFG
Sbjct: 22 PSAFGSMKVSRDKD---------GSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFG 70
Query: 80 VVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEK-DELYL 138
VV+QAK ++GE VAIKKVLQDKR+KNRELQ MR LDH N+V L++ F+S+ EK DE+YL
Sbjct: 71 VVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 130
Query: 139 NLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNL 198
NLVL+YVPETV+RV +H+ + Q +P+IYVKLY YQ+ R+LAYIH + G+CHRDIKPQNL
Sbjct: 131 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-SFGICHRDIKPQNL 189
Query: 199 LVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVL 258
L++P T LKLCDFGSAK LV+GEPN+SYICSRYYRAPELIFGAT+YT++ID+WSAGCVL
Sbjct: 190 LLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVL 249
Query: 259 AELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQK 318
AELLLGQP+FPG+SGVDQLVEIIKVLGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F+
Sbjct: 250 AELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRP 309
Query: 319 RMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
R PPEA+ L SRLL+Y+P R T +A
Sbjct: 310 RTPPEAIALCSRLLEYTPTARLTPLEACA 338
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 444 bits (1141), Expect = e-125, Method: Compositional matrix adjust.
Identities = 211/327 (64%), Positives = 261/327 (79%), Gaps = 13/327 (3%)
Query: 20 PEEMNDMKIRDDKEMEATVVDGNGTEAGHIIVTTIGGKNGQPKQTISYMAERVVGHGSFG 79
P MK+ DK+ G++ ++ T G+ Q +SY +V+G+GSFG
Sbjct: 65 PSAFGSMKVSRDKD---------GSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFG 113
Query: 80 VVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEK-DELYL 138
VV+QAK ++GE VAIKKVLQDKR+KNRELQ MR LDH N+V L++ F+S+ EK DE+YL
Sbjct: 114 VVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 173
Query: 139 NLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNL 198
NLVL+YVPETV+RV +H+ + Q +P+IYVKLY YQ+ R+LAYIH + G+CHRDIKPQNL
Sbjct: 174 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-SFGICHRDIKPQNL 232
Query: 199 LVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVL 258
L++P T LKLCDFGSAK LV+GEPN+SYICSRYYRAPELIFGAT+YT++ID+WSAGCVL
Sbjct: 233 LLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVL 292
Query: 259 AELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQK 318
AELLLGQP+FPG+SGVDQLVEIIKVLGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F+
Sbjct: 293 AELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRP 352
Query: 319 RMPPEAVDLVSRLLQYSPNLRSTAFDA 345
R PPEA+ L SRLL+Y+P R T +A
Sbjct: 353 RTPPEAIALCSRLLEYTPTARLTPLEA 379
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 444 bits (1141), Expect = e-125, Method: Compositional matrix adjust.
Identities = 211/327 (64%), Positives = 261/327 (79%), Gaps = 13/327 (3%)
Query: 20 PEEMNDMKIRDDKEMEATVVDGNGTEAGHIIVTTIGGKNGQPKQTISYMAERVVGHGSFG 79
P MK+ DK+ G++ ++ T G+ Q +SY +V+G+GSFG
Sbjct: 24 PSAFGSMKVSRDKD---------GSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFG 72
Query: 80 VVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEK-DELYL 138
VV+QAK ++GE VAIKKVLQDKR+KNRELQ MR LDH N+V L++ F+S+ EK DE+YL
Sbjct: 73 VVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 132
Query: 139 NLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNL 198
NLVL+YVPETV+RV +H+ + Q +P+IYVKLY YQ+ R+LAYIH + G+CHRDIKPQNL
Sbjct: 133 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-SFGICHRDIKPQNL 191
Query: 199 LVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVL 258
L++P T LKLCDFGSAK LV+GEPN+SYICSRYYRAPELIFGAT+YT++ID+WSAGCVL
Sbjct: 192 LLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVL 251
Query: 259 AELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQK 318
AELLLGQP+FPG+SGVDQLVEIIKVLGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F+
Sbjct: 252 AELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRP 311
Query: 319 RMPPEAVDLVSRLLQYSPNLRSTAFDA 345
R PPEA+ L SRLL+Y+P R T +A
Sbjct: 312 RTPPEAIALCSRLLEYTPTARLTPLEA 338
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 444 bits (1141), Expect = e-125, Method: Compositional matrix adjust.
Identities = 211/329 (64%), Positives = 261/329 (79%), Gaps = 13/329 (3%)
Query: 20 PEEMNDMKIRDDKEMEATVVDGNGTEAGHIIVTTIGGKNGQPKQTISYMAERVVGHGSFG 79
P MK+ DK+ G++ ++ T G+ Q +SY +V+G+GSFG
Sbjct: 20 PSAFGSMKVSRDKD---------GSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFG 68
Query: 80 VVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEK-DELYL 138
VV+QAK ++GE VAIKKVLQDKR+KNRELQ MR LDH N+V L++ F+S+ EK DE+YL
Sbjct: 69 VVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 128
Query: 139 NLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNL 198
NLVL+YVPETV+RV +H+ + Q +P+IYVKLY YQ+ R+LAYIH + G+CHRDIKPQNL
Sbjct: 129 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-SFGICHRDIKPQNL 187
Query: 199 LVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVL 258
L++P T LKLCDFGSAK LV+GEPN+SYICSRYYRAPELIFGAT+YT++ID+WSAGCVL
Sbjct: 188 LLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVL 247
Query: 259 AELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQK 318
AELLLGQP+FPG+SGVDQLVEIIKVLGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F+
Sbjct: 248 AELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRP 307
Query: 319 RMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
R PPEA+ L SRLL+Y+P R T +A
Sbjct: 308 RTPPEAIALCSRLLEYTPTARLTPLEACA 336
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 444 bits (1141), Expect = e-125, Method: Compositional matrix adjust.
Identities = 211/329 (64%), Positives = 261/329 (79%), Gaps = 13/329 (3%)
Query: 20 PEEMNDMKIRDDKEMEATVVDGNGTEAGHIIVTTIGGKNGQPKQTISYMAERVVGHGSFG 79
P MK+ DK+ G++ ++ T G+ Q +SY +V+G+GSFG
Sbjct: 14 PSAFGSMKVSRDKD---------GSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFG 62
Query: 80 VVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEK-DELYL 138
VV+QAK ++GE VAIKKVLQDKR+KNRELQ MR LDH N+V L++ F+S+ EK DE+YL
Sbjct: 63 VVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 122
Query: 139 NLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNL 198
NLVL+YVPETV+RV +H+ + Q +P+IYVKLY YQ+ R+LAYIH + G+CHRDIKPQNL
Sbjct: 123 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-SFGICHRDIKPQNL 181
Query: 199 LVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVL 258
L++P T LKLCDFGSAK LV+GEPN+SYICSRYYRAPELIFGAT+YT++ID+WSAGCVL
Sbjct: 182 LLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVL 241
Query: 259 AELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQK 318
AELLLGQP+FPG+SGVDQLVEIIKVLGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F+
Sbjct: 242 AELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRP 301
Query: 319 RMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
R PPEA+ L SRLL+Y+P R T +A
Sbjct: 302 RTPPEAIALCSRLLEYTPTARLTPLEACA 330
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 441 bits (1134), Expect = e-124, Method: Compositional matrix adjust.
Identities = 207/309 (66%), Positives = 256/309 (82%), Gaps = 4/309 (1%)
Query: 40 DGNGTEAGHIIVTTIGGKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVL 99
D +G++ ++ T G+ Q +SY +V+G+GSFGVV+QAK ++GE VAIKKVL
Sbjct: 10 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL 67
Query: 100 QDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEK-DELYLNLVLEYVPETVHRVIKHHYK 158
QDKR+KNRELQ MR LDH N+V L++ F+S+ EK DE+YLNLVL+YVPETV+RV +H+ +
Sbjct: 68 QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 127
Query: 159 MSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL 218
Q +P+IYVKLY YQ+ R+LAYIH + G+CHRDIKPQNLL++P T LKLCDFGSAK L
Sbjct: 128 AKQTLPVIYVKLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 186
Query: 219 VKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLV 278
V+GEPN+SYICSRYYRAPELIFGAT+YT++ID+WSAGCVLAELLLGQP+FPG+SGVDQLV
Sbjct: 187 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 246
Query: 279 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNL 338
EIIKVLGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F+ R PPEA+ L SRLL+Y+P
Sbjct: 247 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 306
Query: 339 RSTAFDAVG 347
R T +A
Sbjct: 307 RLTPLEACA 315
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 441 bits (1133), Expect = e-124, Method: Compositional matrix adjust.
Identities = 210/329 (63%), Positives = 260/329 (79%), Gaps = 13/329 (3%)
Query: 20 PEEMNDMKIRDDKEMEATVVDGNGTEAGHIIVTTIGGKNGQPKQTISYMAERVVGHGSFG 79
P MK+ DK+ G++ ++ T G+ Q +SY +V+G+GSFG
Sbjct: 20 PSAFGSMKVSRDKD---------GSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFG 68
Query: 80 VVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEK-DELYL 138
VV+QAK ++GE VAIKKVLQDKR+KNRELQ MR LDH N+V L++ F+S+ EK DE+YL
Sbjct: 69 VVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 128
Query: 139 NLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNL 198
NLVL+YVPETV+RV +H+ + Q +P+IYVKLY YQ+ R+LAYIH + G+CHRDIKPQNL
Sbjct: 129 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-SFGICHRDIKPQNL 187
Query: 199 LVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVL 258
L++P T LKLCDFGSAK LV+GEPN+S ICSRYYRAPELIFGAT+YT++ID+WSAGCVL
Sbjct: 188 LLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVL 247
Query: 259 AELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQK 318
AELLLGQP+FPG+SGVDQLVEIIKVLGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F+
Sbjct: 248 AELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRP 307
Query: 319 RMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
R PPEA+ L SRLL+Y+P R T +A
Sbjct: 308 RTPPEAIALCSRLLEYTPTARLTPLEACA 336
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 440 bits (1131), Expect = e-124, Method: Compositional matrix adjust.
Identities = 207/299 (69%), Positives = 252/299 (84%), Gaps = 3/299 (1%)
Query: 50 IVTTIGGKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNREL 109
+V T G +P Q +SY +V+G+GSFGVV+QAK ++GE VAIKKVLQDKR+KNREL
Sbjct: 11 VVATPGQGPDRP-QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNREL 69
Query: 110 QTMRLLDHPNVVSLKHCFFSTTEK-DELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 168
Q MR LDH N+V L++ F+S+ EK DE+YLNLVL+YVPETV+RV +H+ + Q +P+IYV
Sbjct: 70 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 129
Query: 169 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 228
KLY YQ+ R+LAYIH + G+CHRDIKPQNLL++P T LKLCDFGSAK LV+GEPN+SYI
Sbjct: 130 KLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI 188
Query: 229 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 288
CSRYYRAPELIFGAT+YT++ID+WSAGCVLAELLLGQP+FPG+SGVDQLVEIIKVLGTPT
Sbjct: 189 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPT 248
Query: 289 REEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
RE+I+ MNPNYTEFKFPQIKAHPW K+F+ R PPEA+ L SRLL+Y+P R T +A
Sbjct: 249 REQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 307
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 438 bits (1127), Expect = e-123, Method: Compositional matrix adjust.
Identities = 206/309 (66%), Positives = 255/309 (82%), Gaps = 4/309 (1%)
Query: 40 DGNGTEAGHIIVTTIGGKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVL 99
D +G++ ++ T G+ Q +SY +V+G+GSFGVV+QAK ++GE VAIKKVL
Sbjct: 9 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL 66
Query: 100 QDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEK-DELYLNLVLEYVPETVHRVIKHHYK 158
QDKR+KNRELQ MR LDH N+V L++ F+S+ EK DE+YLNLVL+YVPETV+RV +H+ +
Sbjct: 67 QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 126
Query: 159 MSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL 218
Q +P+IYVKLY YQ+ R+LAYIH + G+CHRDIKPQNLL++P T LKLCDFGSAK L
Sbjct: 127 AKQTLPVIYVKLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 185
Query: 219 VKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLV 278
V+GEPN+S ICSRYYRAPELIFGAT+YT++ID+WSAGCVLAELLLGQP+FPG+SGVDQLV
Sbjct: 186 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 245
Query: 279 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNL 338
EIIKVLGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F+ R PPEA+ L SRLL+Y+P
Sbjct: 246 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 305
Query: 339 RSTAFDAVG 347
R T +A
Sbjct: 306 RLTPLEACA 314
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 438 bits (1126), Expect = e-123, Method: Compositional matrix adjust.
Identities = 207/299 (69%), Positives = 252/299 (84%), Gaps = 3/299 (1%)
Query: 50 IVTTIGGKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNREL 109
+V T G +P Q +SY +V+G+GSFGVV+QAK ++GE VAIKKVLQDKR+KNREL
Sbjct: 6 VVATPGQGPDRP-QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNREL 64
Query: 110 QTMRLLDHPNVVSLKHCFFSTTEK-DELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 168
Q MR LDH N+V L++ F+S+ EK DE+YLNLVL+YVPETV+RV +H+ + Q +P+IYV
Sbjct: 65 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 124
Query: 169 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 228
KLY YQ+ R+LAYIH + G+CHRDIKPQNLL++P T LKLCDFGSAK LV+GEPN+SYI
Sbjct: 125 KLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI 183
Query: 229 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 288
CSRYYRAPELIFGAT+YT++ID+WSAGCVLAELLLGQP+FPG+SGVDQLVEIIKVLGTPT
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPT 243
Query: 289 REEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
RE+I+ MNPNYTEFKFPQIKAHPW K+F+ R PPEA+ L SRLL+Y+P R T +A
Sbjct: 244 REQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 438 bits (1126), Expect = e-123, Method: Compositional matrix adjust.
Identities = 206/309 (66%), Positives = 255/309 (82%), Gaps = 4/309 (1%)
Query: 40 DGNGTEAGHIIVTTIGGKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVL 99
D +G++ ++ T G+ Q +SY +V+G+GSFGVV+QAK ++GE VAIKKVL
Sbjct: 5 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL 62
Query: 100 QDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEK-DELYLNLVLEYVPETVHRVIKHHYK 158
QDKR+KNRELQ MR LDH N+V L++ F+S+ EK DE+YLNLVL+YVPETV+RV +H+ +
Sbjct: 63 QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 122
Query: 159 MSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL 218
Q +P+IYVKLY YQ+ R+LAYIH + G+CHRDIKPQNLL++P T LKLCDFGSAK L
Sbjct: 123 AKQTLPVIYVKLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 181
Query: 219 VKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLV 278
V+GEPN+S ICSRYYRAPELIFGAT+YT++ID+WSAGCVLAELLLGQP+FPG+SGVDQLV
Sbjct: 182 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 241
Query: 279 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNL 338
EIIKVLGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F+ R PPEA+ L SRLL+Y+P
Sbjct: 242 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 301
Query: 339 RSTAFDAVG 347
R T +A
Sbjct: 302 RLTPLEACA 310
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 438 bits (1126), Expect = e-123, Method: Compositional matrix adjust.
Identities = 206/309 (66%), Positives = 255/309 (82%), Gaps = 4/309 (1%)
Query: 40 DGNGTEAGHIIVTTIGGKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVL 99
D +G++ ++ T G+ Q +SY +V+G+GSFGVV+QAK ++GE VAIKKVL
Sbjct: 16 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL 73
Query: 100 QDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEK-DELYLNLVLEYVPETVHRVIKHHYK 158
QDKR+KNRELQ MR LDH N+V L++ F+S+ EK DE+YLNLVL+YVPETV+RV +H+ +
Sbjct: 74 QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 133
Query: 159 MSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL 218
Q +P+IYVKLY YQ+ R+LAYIH + G+CHRDIKPQNLL++P T LKLCDFGSAK L
Sbjct: 134 AKQTLPVIYVKLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 192
Query: 219 VKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLV 278
V+GEPN+S ICSRYYRAPELIFGAT+YT++ID+WSAGCVLAELLLGQP+FPG+SGVDQLV
Sbjct: 193 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 252
Query: 279 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNL 338
EIIKVLGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F+ R PPEA+ L SRLL+Y+P
Sbjct: 253 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 312
Query: 339 RSTAFDAVG 347
R T +A
Sbjct: 313 RLTPLEACA 321
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 438 bits (1126), Expect = e-123, Method: Compositional matrix adjust.
Identities = 206/309 (66%), Positives = 255/309 (82%), Gaps = 4/309 (1%)
Query: 40 DGNGTEAGHIIVTTIGGKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVL 99
D +G++ ++ T G+ Q +SY +V+G+GSFGVV+QAK ++GE VAIKKVL
Sbjct: 9 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL 66
Query: 100 QDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEK-DELYLNLVLEYVPETVHRVIKHHYK 158
QDKR+KNRELQ MR LDH N+V L++ F+S+ EK DE+YLNLVL+YVPETV+RV +H+ +
Sbjct: 67 QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 126
Query: 159 MSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL 218
Q +P+IYVKLY YQ+ R+LAYIH + G+CHRDIKPQNLL++P T LKLCDFGSAK L
Sbjct: 127 AKQTLPVIYVKLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 185
Query: 219 VKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLV 278
V+GEPN+S ICSRYYRAPELIFGAT+YT++ID+WSAGCVLAELLLGQP+FPG+SGVDQLV
Sbjct: 186 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 245
Query: 279 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNL 338
EIIKVLGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F+ R PPEA+ L SRLL+Y+P
Sbjct: 246 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 305
Query: 339 RSTAFDAVG 347
R T +A
Sbjct: 306 RLTPLEACA 314
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 435 bits (1119), Expect = e-122, Method: Compositional matrix adjust.
Identities = 206/299 (68%), Positives = 251/299 (83%), Gaps = 3/299 (1%)
Query: 50 IVTTIGGKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNREL 109
+V T G +P Q +SY +V+G+GSFGVV+QAK ++GE VAIKKVLQDKR+KNREL
Sbjct: 6 VVATPGQGPDRP-QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNREL 64
Query: 110 QTMRLLDHPNVVSLKHCFFSTTEK-DELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 168
Q MR LDH N+V L++ F+S+ EK DE+YLNLVL+YVPETV+RV +H+ + Q +P+IYV
Sbjct: 65 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 124
Query: 169 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 228
KLY YQ+ R+LAYIH + G+CHRDIKPQNLL++P T LKLCDFGSAK LV+GEPN+S I
Sbjct: 125 KLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI 183
Query: 229 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 288
CSRYYRAPELIFGAT+YT++ID+WSAGCVLAELLLGQP+FPG+SGVDQLVEIIKVLGTPT
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPT 243
Query: 289 REEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
RE+I+ MNPNYTEFKFPQIKAHPW K+F+ R PPEA+ L SRLL+Y+P R T +A
Sbjct: 244 REQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 435 bits (1119), Expect = e-122, Method: Compositional matrix adjust.
Identities = 206/299 (68%), Positives = 251/299 (83%), Gaps = 3/299 (1%)
Query: 50 IVTTIGGKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNREL 109
+V T G +P Q +SY +V+G+GSFGVV+QAK ++GE VAIKKVLQDKR+KNREL
Sbjct: 7 VVATPGQGPDRP-QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNREL 65
Query: 110 QTMRLLDHPNVVSLKHCFFSTTEK-DELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 168
Q MR LDH N+V L++ F+S+ EK DE+YLNLVL+YVPETV+RV +H+ + Q +P+IYV
Sbjct: 66 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 125
Query: 169 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 228
KLY YQ+ R+LAYIH + G+CHRDIKPQNLL++P T LKLCDFGSAK LV+GEPN+S I
Sbjct: 126 KLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI 184
Query: 229 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 288
CSRYYRAPELIFGAT+YT++ID+WSAGCVLAELLLGQP+FPG+SGVDQLVEIIKVLGTPT
Sbjct: 185 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPT 244
Query: 289 REEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
RE+I+ MNPNYTEFKFPQIKAHPW K+F+ R PPEA+ L SRLL+Y+P R T +A
Sbjct: 245 REQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 303
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 435 bits (1119), Expect = e-122, Method: Compositional matrix adjust.
Identities = 206/299 (68%), Positives = 251/299 (83%), Gaps = 3/299 (1%)
Query: 50 IVTTIGGKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNREL 109
+V T G +P Q +SY +V+G+GSFGVV+QAK ++GE VAIKKVLQDKR+KNREL
Sbjct: 6 VVATPGQGPDRP-QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNREL 64
Query: 110 QTMRLLDHPNVVSLKHCFFSTTEK-DELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 168
Q MR LDH N+V L++ F+S+ EK DE+YLNLVL+YVPETV+RV +H+ + Q +P+IYV
Sbjct: 65 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 124
Query: 169 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 228
KLY YQ+ R+LAYIH + G+CHRDIKPQNLL++P T LKLCDFGSAK LV+GEPN+S I
Sbjct: 125 KLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI 183
Query: 229 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 288
CSRYYRAPELIFGAT+YT++ID+WSAGCVLAELLLGQP+FPG+SGVDQLVEIIKVLGTPT
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPT 243
Query: 289 REEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
RE+I+ MNPNYTEFKFPQIKAHPW K+F+ R PPEA+ L SRLL+Y+P R T +A
Sbjct: 244 REQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 435 bits (1119), Expect = e-122, Method: Compositional matrix adjust.
Identities = 206/299 (68%), Positives = 251/299 (83%), Gaps = 3/299 (1%)
Query: 50 IVTTIGGKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNREL 109
+V T G +P Q +SY +V+G+GSFGVV+QAK ++GE VAIKKVLQDKR+KNREL
Sbjct: 10 VVATPGQGPDRP-QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNREL 68
Query: 110 QTMRLLDHPNVVSLKHCFFSTTEK-DELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 168
Q MR LDH N+V L++ F+S+ EK DE+YLNLVL+YVPETV+RV +H+ + Q +P+IYV
Sbjct: 69 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 128
Query: 169 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 228
KLY YQ+ R+LAYIH + G+CHRDIKPQNLL++P T LKLCDFGSAK LV+GEPN+S I
Sbjct: 129 KLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI 187
Query: 229 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 288
CSRYYRAPELIFGAT+YT++ID+WSAGCVLAELLLGQP+FPG+SGVDQLVEIIKVLGTPT
Sbjct: 188 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPT 247
Query: 289 REEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
RE+I+ MNPNYTEFKFPQIKAHPW K+F+ R PPEA+ L SRLL+Y+P R T +A
Sbjct: 248 REQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 306
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 432 bits (1111), Expect = e-121, Method: Compositional matrix adjust.
Identities = 205/299 (68%), Positives = 250/299 (83%), Gaps = 3/299 (1%)
Query: 50 IVTTIGGKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNREL 109
+V T G +P Q +SY +V+G+GSFGVV+QAK ++GE VAIKKVLQ K +KNREL
Sbjct: 6 VVATPGQGPDRP-QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNREL 64
Query: 110 QTMRLLDHPNVVSLKHCFFSTTEK-DELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 168
Q MR LDH N+V L++ F+S+ EK DE+YLNLVL+YVPETV+RV +H+ + Q +P+IYV
Sbjct: 65 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 124
Query: 169 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 228
KLY YQ+ R+LAYIH + G+CHRDIKPQNLL++P T LKLCDFGSAK LV+GEPN+SYI
Sbjct: 125 KLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI 183
Query: 229 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 288
CSRYYRAPELIFGAT+YT++ID+WSAGCVLAELLLGQP+FPG+SGVDQLVEIIKVLGTPT
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPT 243
Query: 289 REEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
RE+I+ MNPNYTEFKFPQIKAHPW K+F+ R PPEA+ L SRLL+Y+P R T +A
Sbjct: 244 REQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 432 bits (1111), Expect = e-121, Method: Compositional matrix adjust.
Identities = 205/299 (68%), Positives = 250/299 (83%), Gaps = 3/299 (1%)
Query: 50 IVTTIGGKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNREL 109
+V T G +P Q +SY +V+G+GSFGVV+QAK ++GE VAIKKVLQDKR+KNREL
Sbjct: 6 VVATPGQGPDRP-QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNREL 64
Query: 110 QTMRLLDHPNVVSLKHCFFSTTEK-DELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 168
Q MR LDH N+V L++ F+S+ EK D +YLNLVL+YVPETV+RV +H+ + Q +P+IYV
Sbjct: 65 QIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 124
Query: 169 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 228
KLY YQ+ R+LAYIH + G+CHRDIKPQNLL++P T LKLCDFGSAK LV+GEPN+S I
Sbjct: 125 KLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI 183
Query: 229 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 288
CSRYYRAPELIFGAT+YT++ID+WSAGCVLAELLLGQP+FPG+SGVDQLVEIIKVLGTPT
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPT 243
Query: 289 REEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
RE+I+ MNPNYTEFKFPQIKAHPW K+F+ R PPEA+ L SRLL+Y+P R T +A
Sbjct: 244 REQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 431 bits (1108), Expect = e-121, Method: Compositional matrix adjust.
Identities = 204/299 (68%), Positives = 249/299 (83%), Gaps = 3/299 (1%)
Query: 50 IVTTIGGKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNREL 109
+V T G +P Q +SY +V+G+GSFGVV+QAK ++GE VAIKKVLQ K +KNREL
Sbjct: 6 VVATPGQGPDRP-QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNREL 64
Query: 110 QTMRLLDHPNVVSLKHCFFSTTEK-DELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 168
Q MR LDH N+V L++ F+S+ EK DE+YLNLVL+YVPETV+RV +H+ + Q +P+IYV
Sbjct: 65 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 124
Query: 169 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 228
KLY YQ+ R+LAYIH + G+CHRDIKPQNLL++P T LKLCDFGSAK LV+GEPN+SYI
Sbjct: 125 KLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI 183
Query: 229 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 288
CSRYYRAPELIFGAT+YT++ID+WSAGCVLAELLLGQP+FPG+SGVDQLVEIIKVLGTPT
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPT 243
Query: 289 REEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
RE+I+ MNPNYTEF FPQIKAHPW K+F+ R PPEA+ L SRLL+Y+P R T +A
Sbjct: 244 REQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 425 bits (1092), Expect = e-119, Method: Compositional matrix adjust.
Identities = 202/299 (67%), Positives = 247/299 (82%), Gaps = 3/299 (1%)
Query: 50 IVTTIGGKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNREL 109
+V T G +P Q +SY +V+G+GSFGVV+QAK ++GE VAIKKVLQ K +KNREL
Sbjct: 6 VVATPGQGPDRP-QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNREL 64
Query: 110 QTMRLLDHPNVVSLKHCFFSTTEK-DELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 168
Q MR LDH N+V L++ F+S+ EK DE+YLNLVL+YVP TV+RV +H+ + Q +P+IYV
Sbjct: 65 QIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYV 124
Query: 169 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYI 228
KLY YQ+ R+LAYIH + G+CHRDIKPQNLL++P T LKLCDFGSAK LV+GEPN+S I
Sbjct: 125 KLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI 183
Query: 229 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 288
CSRYYRAPELIFGAT+YT++ID+WSAGCVLAELLLGQP+FPG+SGVDQLVEIIKVLGTPT
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPT 243
Query: 289 REEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
RE+I+ MNPNYTEF FPQIKAHPW K+F+ R PPEA+ L SRLL+Y+P R T +A
Sbjct: 244 REQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 415 bits (1067), Expect = e-116, Method: Compositional matrix adjust.
Identities = 197/299 (65%), Positives = 247/299 (82%), Gaps = 4/299 (1%)
Query: 49 IIVTTIGGKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRE 108
I V GK G+ ++ I+Y +V+G+GSFGVVFQAK +E+ E VAIKKVLQDKR+KNRE
Sbjct: 25 IKVLASDGKTGEQRE-IAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKNRE 82
Query: 109 LQTMRLLDHPNVVSLKHCFFSTTEK-DELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIY 167
LQ MR++ HPNVV LK F+S +K DE++LNLVLEYVPETV+R +H+ K+ Q MP++
Sbjct: 83 LQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLL 142
Query: 168 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 227
+KLY YQ+ R+LAYIH +IG+CHRDIKPQNLL++P + LKL DFGSAK+L+ GEPN+S
Sbjct: 143 IKLYMYQLLRSLAYIH-SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSX 201
Query: 228 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 287
ICSRYYRAPELIFGAT YT IDIWS GCV+AEL+ GQPLFPGESG+DQLVEIIKVLGTP
Sbjct: 202 ICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTP 261
Query: 288 TREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
+RE+IK MNPNY E KFPQI+ HP+ K+F+ R PP+A+DL+SRLL+Y+P+ R TA +A+
Sbjct: 262 SREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEAL 320
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 308 bits (788), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 143/314 (45%), Positives = 211/314 (67%), Gaps = 34/314 (10%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHC 126
Y + +G GSFG+V + +E+G+ A+KKVLQD RYKNREL M++LDH N++ L
Sbjct: 9 YSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKLVDY 68
Query: 127 FFSTTEKD---------------------------------ELYLNLVLEYVPETVHRVI 153
F++T +++ YLN+++EYVP+T+H+V+
Sbjct: 69 FYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVL 128
Query: 154 KHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFG 213
K + + +P+ + +Y YQ+ RA+ +IH ++G+CHRDIKPQNLLVN + LKLCDFG
Sbjct: 129 KSFIRSGRSIPMNLISIYIYQLFRAVGFIH-SLGICHRDIKPQNLLVNSKDNTLKLCDFG 187
Query: 214 SAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESG 273
SAK L+ EP+++ ICSR+YRAPEL+ GATEYT +ID+WS GCV EL+LG+PLF GE+
Sbjct: 188 SAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETS 247
Query: 274 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQ 333
+DQLV II+++GTPT+E++ MNP+YTE +FP +KA W KI + P A+DL+ ++L+
Sbjct: 248 IDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILR 307
Query: 334 YSPNLRSTAFDAVG 347
Y P+LR ++A+
Sbjct: 308 YEPDLRINPYEAMA 321
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 288 bits (738), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 139/294 (47%), Positives = 200/294 (68%), Gaps = 9/294 (3%)
Query: 62 KQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMR---LLDHP 118
K+ + ER+ G G+FG V K TG +VAIKKV+QD R++NRELQ M+ +L HP
Sbjct: 20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHP 79
Query: 119 NVVSLKHCFFSTTEKD--ELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQIC 176
N+V L+ F++ E+D ++YLN+V+EYVP+T+HR +++Y+ P I +K++ +Q+
Sbjct: 80 NIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLI 139
Query: 177 RALAYIH-NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRA 235
R++ +H ++ VCHRDIKP N+LVN LKLCDFGSAK L EPN++YICSRYYRA
Sbjct: 140 RSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRA 199
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM 295
PELIFG YT A+DIWS GC+ AE++LG+P+F G++ QL EI++VLG P+RE ++ +
Sbjct: 200 PELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKL 259
Query: 296 NPNYTEFKFPQIKAHPWHKIFQK---RMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
NP++T+ K PW +F + EA DL+S LLQY P R ++A+
Sbjct: 260 NPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEAL 313
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/291 (35%), Positives = 160/291 (54%), Gaps = 25/291 (8%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNV 120
Y VG G++GVV++AK G VA+K++ D + RE+ ++ L HPN+
Sbjct: 23 YQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNI 81
Query: 121 VSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
VSL S E L LV E++ + + +V+ + Q +K+Y YQ+ R +A
Sbjct: 82 VSLIDVIHS-----ERCLTLVFEFMEKDLKKVLDENKTGLQDS---QIKIYLYQLLRGVA 133
Query: 181 YIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPE 237
+ H + HRD+KPQNLL+N LKL DFG A+ G P SY + + +YRAP+
Sbjct: 134 HCHQH-RILHRDLKPQNLLINSDG-ALKLADFGLARAF--GIPVRSYTHEVVTLWYRAPD 189
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN- 296
++ G+ +Y+ ++DIWS GC+ AE++ G+PLFPG + DQL +I +LGTP E +
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQE 249
Query: 297 -PNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
P + + F + PW I E +DL+S +L + PN R +A DA+
Sbjct: 250 LPLWKQRTFQVFEKKPWSSIIPG-FCQEGIDLLSNMLCFDPNKRISARDAM 299
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/291 (35%), Positives = 160/291 (54%), Gaps = 25/291 (8%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNV 120
Y VG G++GVV++AK G VA+K++ D + RE+ ++ L HPN+
Sbjct: 23 YQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNI 81
Query: 121 VSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
VSL S E L LV E++ + + +V+ + Q +K+Y YQ+ R +A
Sbjct: 82 VSLIDVIHS-----ERCLTLVFEFMEKDLKKVLDENKTGLQDS---QIKIYLYQLLRGVA 133
Query: 181 YIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPE 237
+ H + HRD+KPQNLL+N LKL DFG A+ G P SY + + +YRAP+
Sbjct: 134 HCHQH-RILHRDLKPQNLLINSDG-ALKLADFGLARAF--GIPVRSYTHEVVTLWYRAPD 189
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN- 296
++ G+ +Y+ ++DIWS GC+ AE++ G+PLFPG + DQL +I +LGTP E +
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQE 249
Query: 297 -PNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
P + + F + PW I E +DL+S +L + PN R +A DA+
Sbjct: 250 LPLWKQRTFQVFEKKPWSSIIPG-FCQEGIDLLSNMLCFDPNKRISARDAM 299
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 164 bits (416), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 105/289 (36%), Positives = 156/289 (53%), Gaps = 31/289 (10%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN---------RELQTMRLLDHPNVVSL 123
+G G F V++A+ T + VAIKK+ R + RE++ ++ L HPN++ L
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 124 KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
F + ++LV +++ + +IK + S + ++K Y + L Y+H
Sbjct: 78 LDAFGHKSN-----ISLVFDFMETDLEVIIKDN---SLVLTPSHIKAYMLMTLQGLEYLH 129
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIF 240
+ HRD+KP NLL++ LKL DFG AK G PN +Y + +R+YRAPEL+F
Sbjct: 130 QH-WILHRDLKPNNLLLD-ENGVLKLADFGLAKSF--GSPNRAYXHQVVTRWYRAPELLF 185
Query: 241 GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK--CMNPN 298
GA Y +D+W+ GC+LAELLL P PG+S +DQL I + LGTPT E+ C P+
Sbjct: 186 GARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPD 245
Query: 299 YTEFK-FPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
Y FK FP I P H IF + +DL+ L ++P R TA A+
Sbjct: 246 YVTFKSFPGI---PLHHIFSA-AGDDLLDLIQGLFLFNPCARITATQAL 290
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 164 bits (415), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 169/294 (57%), Gaps = 22/294 (7%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKV--LQDKRYKNRELQTMRLL---DHPNVV 121
Y + +G G++G+V A VAIKK+ + + Y R L+ +++L H NV+
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAY 181
++ ++T + + +V + + +++++K SQ++ ++ + YQI R L Y
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLMETDLYKLLK-----SQQLSNDHICYFLYQILRGLKY 159
Query: 182 IHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY----ICSRYYRAPE 237
IH+ V HRD+KP NLL+N T LK+CDFG A++ + + + +R+YRAPE
Sbjct: 160 IHSA-NVLHRDLKPSNLLINT-TCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPE 217
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM-- 295
++ + YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C+
Sbjct: 218 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 277
Query: 296 --NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
NY + P W K+F K +A+DL+ R+L ++PN R T +A+
Sbjct: 278 MKARNYLQ-SLPSKTKVAWAKLFPKS-DSKALDLLDRMLTFNPNKRITVEEALA 329
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/309 (34%), Positives = 169/309 (54%), Gaps = 36/309 (11%)
Query: 56 GKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------REL 109
G G P+ ++ +G G++GVV++A+ TGE VA+KK+ D + RE+
Sbjct: 1 GPLGSPEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI 60
Query: 110 QTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQR--MPLIY 167
++ L+HPN+V L + +++LYL V E +H+ +K S +PL
Sbjct: 61 SLLKELNHPNIVKLLDVIHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPL 111
Query: 168 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 227
+K Y +Q+ + LA+ H+ V HRD+KPQNLL+N +KL DFG A+ G P +Y
Sbjct: 112 IKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTY 167
Query: 228 ---ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVL 284
+ + +YRAPE++ G Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + L
Sbjct: 168 THEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 227
Query: 285 GTPTREEIKCMN--PNYTEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNL 338
GTP + P+Y FP+ W + F K +PP + L+S++L Y PN
Sbjct: 228 GTPDEVVWPGVTSMPDYKP-SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNK 281
Query: 339 RSTAFDAVG 347
R +A A+
Sbjct: 282 RISAKAALA 290
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 162 bits (410), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/309 (34%), Positives = 169/309 (54%), Gaps = 36/309 (11%)
Query: 56 GKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------REL 109
G G P+ ++ +G G++GVV++A+ TGE VA+KK+ D + RE+
Sbjct: 1 GPLGSPEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI 60
Query: 110 QTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQR--MPLIY 167
++ L+HPN+V L + +++LYL V E +H+ +K S +PL
Sbjct: 61 SLLKELNHPNIVKLLDVIHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPL 111
Query: 168 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 227
+K Y +Q+ + LA+ H+ V HRD+KPQNLL+N +KL DFG A+ G P +Y
Sbjct: 112 IKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTY 167
Query: 228 ---ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVL 284
+ + +YRAPE++ G Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + L
Sbjct: 168 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 227
Query: 285 GTPTREEIKCMN--PNYTEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNL 338
GTP + P+Y FP+ W + F K +PP + L+S++L Y PN
Sbjct: 228 GTPDEVVWPGVTSMPDYKP-SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNK 281
Query: 339 RSTAFDAVG 347
R +A A+
Sbjct: 282 RISAKAALA 290
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 160 bits (406), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 173/327 (52%), Gaps = 57/327 (17%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQ------DKRYKNRELQTM-RLLDHPN 119
Y + +G G++G+V+++ TGE VA+KK+ D + RE+ + L H N
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHEN 70
Query: 120 VVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRAL 179
+V+L + + ++D + LV +Y+ +H VI+ + + ++ + YQ+ + +
Sbjct: 71 IVNLLNVLRADNDRD---VYLVFDYMETDLHAVIR-----ANILEPVHKQYVVYQLIKVI 122
Query: 180 AYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVK------------------- 220
Y+H+ G+ HRD+KP N+L+N H +K+ DFG ++ V
Sbjct: 123 KYLHSG-GLLHRDMKPSNILLNAECH-VKVADFGLSRSFVNIRRVTNNIPLSINENTENF 180
Query: 221 --GEPNIS-YICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQL 277
+P ++ Y+ +R+YRAPE++ G+T+YT ID+WS GC+L E+L G+P+FPG S ++QL
Sbjct: 181 DDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQL 240
Query: 278 VEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAH-------------PWHKIFQKRMPP-- 322
II V+ P+ E+++ + + + +K W + K P
Sbjct: 241 ERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKAD 300
Query: 323 ---EAVDLVSRLLQYSPNLRSTAFDAV 346
EA+DL+ +LLQ++PN R +A DA+
Sbjct: 301 CNEEALDLLDKLLQFNPNKRISANDAL 327
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 160 bits (406), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 106/292 (36%), Positives = 163/292 (55%), Gaps = 36/292 (12%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 126
+G G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQR--MPLIYVKLYFYQICRALAYIHN 184
+ +++LYL V E VH+ +K S +PL +K Y +Q+ + LA+ H+
Sbjct: 70 IHT---ENKLYL------VFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 241
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 121 H-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 176
Query: 242 ATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNY 299
Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 300 TEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTAFDAVG 347
FP+ W + F K +PP + L+S++L Y PN R +A A+
Sbjct: 237 KP-SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 160 bits (406), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 163/292 (55%), Gaps = 36/292 (12%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 126
+G G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQR--MPLIYVKLYFYQICRALAYIHN 184
+ +++LYL V E +H+ +K S +PL +K Y +Q+ + LA+ H+
Sbjct: 71 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 241
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 122 H-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 177
Query: 242 ATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNY 299
Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 178 XKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 300 TEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTAFDAVG 347
FP+ W + F K +PP + L+S++L Y PN R +A A+
Sbjct: 238 KP-SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 160 bits (405), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 160/290 (55%), Gaps = 22/290 (7%)
Query: 72 VVGHGSFGVVFQAKCLETGEAVAIKK------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
+G+G++GVV A+ TG+ VAIKK V+ + + REL+ ++ H N++++K
Sbjct: 61 TIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKD 120
Query: 126 CFFSTTEKDEL-YLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN 184
T E + +VL+ + +H++I SQ + L +V+ + YQ+ R L Y+H+
Sbjct: 121 ILRPTVPYGEFKSVYVVLDLMESDLHQIIHS----SQPLTLEHVRYFLYQLLRGLKYMHS 176
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-----ISYICSRYYRAPELI 239
V HRD+KP NLLVN + +LK+ DFG A+ L Y+ +R+YRAPEL+
Sbjct: 177 A-QVIHRDLKPSNLLVNENC-ELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELM 234
Query: 240 FGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY 299
EYT AID+WS GC+ E+L + LFPG++ V QL I+ VLGTP+ I+ +
Sbjct: 235 LSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAER 294
Query: 300 TEF---KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
P + PW ++ +A+ L+ R+L++ P+ R +A A+
Sbjct: 295 VRAYIQSLPPRQPVPWETVYPG-ADRQALSLLGRMLRFEPSARISAAAAL 343
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 160 bits (405), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 104/290 (35%), Positives = 163/290 (56%), Gaps = 32/290 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 126
+G G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTI 186
+ +++LYL V E+V + + + + +PLI K Y +Q+ + LA+ H+
Sbjct: 74 IHT---ENKLYL--VFEHVDQDLKKFMDASALTGIPLPLI--KSYLFQLLQGLAFCHSH- 125
Query: 187 GVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 243
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 126 RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 244 EYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTE 301
Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 302 FKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTAFDAVG 347
FP+ W + F K +PP + L+S++L Y PN R +A A+
Sbjct: 243 -SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 160/290 (55%), Gaps = 22/290 (7%)
Query: 72 VVGHGSFGVVFQAKCLETGEAVAIKK------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
+G+G++GVV A+ TG+ VAIKK V+ + + REL+ ++ H N++++K
Sbjct: 62 TIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKD 121
Query: 126 CFFSTTEKDEL-YLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN 184
T E + +VL+ + +H++I SQ + L +V+ + YQ+ R L Y+H+
Sbjct: 122 ILRPTVPYGEFKSVYVVLDLMESDLHQIIHS----SQPLTLEHVRYFLYQLLRGLKYMHS 177
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-----ISYICSRYYRAPELI 239
V HRD+KP NLLVN + +LK+ DFG A+ L Y+ +R+YRAPEL+
Sbjct: 178 A-QVIHRDLKPSNLLVNENC-ELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELM 235
Query: 240 FGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY 299
EYT AID+WS GC+ E+L + LFPG++ V QL I+ VLGTP+ I+ +
Sbjct: 236 LSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAER 295
Query: 300 TEF---KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
P + PW ++ +A+ L+ R+L++ P+ R +A A+
Sbjct: 296 VRAYIQSLPPRQPVPWETVYPG-ADRQALSLLGRMLRFEPSARISAAAAL 344
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 163/292 (55%), Gaps = 36/292 (12%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 126
+G G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQR--MPLIYVKLYFYQICRALAYIHN 184
+ +++LYL V E +H+ +K S +PL +K Y +Q+ + LA+ H+
Sbjct: 71 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 241
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 122 H-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLG 177
Query: 242 ATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNY 299
Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 300 TEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTAFDAVG 347
FP+ W + F K +PP + L+S++L Y PN R +A A+
Sbjct: 238 KP-SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 163/292 (55%), Gaps = 36/292 (12%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 126
+G G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQR--MPLIYVKLYFYQICRALAYIHN 184
+ +++LYL V E +H+ +K S +PL +K Y +Q+ + LA+ H+
Sbjct: 72 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 241
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 123 H-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLG 178
Query: 242 ATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNY 299
Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 238
Query: 300 TEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTAFDAVG 347
FP+ W + F K +PP + L+S++L Y PN R +A A+
Sbjct: 239 KP-SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 163/292 (55%), Gaps = 36/292 (12%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 126
+G G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQR--MPLIYVKLYFYQICRALAYIHN 184
+ +++LYL V E +H+ +K S +PL +K Y +Q+ + LA+ H+
Sbjct: 72 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 241
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 123 H-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 178
Query: 242 ATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNY 299
Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 238
Query: 300 TEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTAFDAVG 347
FP+ W + F K +PP + L+S++L Y PN R +A A+
Sbjct: 239 KP-SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 163/292 (55%), Gaps = 36/292 (12%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 126
+G G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQR--MPLIYVKLYFYQICRALAYIHN 184
+ +++LYL V E +H+ +K S +PL +K Y +Q+ + LA+ H+
Sbjct: 71 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 241
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 122 H-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLG 177
Query: 242 ATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNY 299
Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 300 TEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTAFDAVG 347
FP+ W + F K +PP + L+S++L Y PN R +A A+
Sbjct: 238 KP-SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 163/292 (55%), Gaps = 36/292 (12%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 126
+G G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQR--MPLIYVKLYFYQICRALAYIHN 184
+ +++LYL V E +H+ +K S +PL +K Y +Q+ + LA+ H+
Sbjct: 71 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 241
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 122 H-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLG 177
Query: 242 ATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNY 299
Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 300 TEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTAFDAVG 347
FP+ W + F K +PP + L+S++L Y PN R +A A+
Sbjct: 238 KP-SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 163/292 (55%), Gaps = 36/292 (12%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 126
+G G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQR--MPLIYVKLYFYQICRALAYIHN 184
+ +++LYL V E +H+ +K S +PL +K Y +Q+ + LA+ H+
Sbjct: 73 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 241
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 124 H-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLG 179
Query: 242 ATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNY 299
Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 239
Query: 300 TEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTAFDAVG 347
FP+ W + F K +PP + L+S++L Y PN R +A A+
Sbjct: 240 KP-SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 285
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 163/292 (55%), Gaps = 36/292 (12%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 126
+G G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQR--MPLIYVKLYFYQICRALAYIHN 184
+ +++LYL V E +H+ +K S +PL +K Y +Q+ + LA+ H+
Sbjct: 71 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 241
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 122 H-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLG 177
Query: 242 ATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNY 299
Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 300 TEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTAFDAVG 347
FP+ W + F K +PP + L+S++L Y PN R +A A+
Sbjct: 238 KP-SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 163/292 (55%), Gaps = 36/292 (12%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 126
+G G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQR--MPLIYVKLYFYQICRALAYIHN 184
+ +++LYL V E +H+ +K S +PL +K Y +Q+ + LA+ H+
Sbjct: 71 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 241
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 122 H-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 177
Query: 242 ATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNY 299
Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 300 TEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTAFDAVG 347
FP+ W + F K +PP + L+S++L Y PN R +A A+
Sbjct: 238 KP-SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 163/292 (55%), Gaps = 36/292 (12%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 126
+G G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQR--MPLIYVKLYFYQICRALAYIHN 184
+ +++LYL V E +H+ +K S +PL +K Y +Q+ + LA+ H+
Sbjct: 70 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 241
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 121 H-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 176
Query: 242 ATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNY 299
Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 300 TEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTAFDAVG 347
FP+ W + F K +PP + L+S++L Y PN R +A A+
Sbjct: 237 KP-SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 163/292 (55%), Gaps = 36/292 (12%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 126
+G G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQR--MPLIYVKLYFYQICRALAYIHN 184
+ +++LYL V E +H+ +K S +PL +K Y +Q+ + LA+ H+
Sbjct: 74 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 241
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 125 H-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLG 180
Query: 242 ATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNY 299
Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 240
Query: 300 TEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTAFDAVG 347
FP+ W + F K +PP + L+S++L Y PN R +A A+
Sbjct: 241 KP-SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 163/292 (55%), Gaps = 36/292 (12%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 126
+G G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQR--MPLIYVKLYFYQICRALAYIHN 184
+ +++LYL V E +H+ +K S +PL +K Y +Q+ + LA+ H+
Sbjct: 73 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 241
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 124 H-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLG 179
Query: 242 ATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNY 299
Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 239
Query: 300 TEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTAFDAVG 347
FP+ W + F K +PP + L+S++L Y PN R +A A+
Sbjct: 240 KP-SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 285
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 163/292 (55%), Gaps = 36/292 (12%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 126
+G G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQR--MPLIYVKLYFYQICRALAYIHN 184
+ +++LYL V E +H+ +K S +PL +K Y +Q+ + LA+ H+
Sbjct: 70 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 241
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 121 H-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 176
Query: 242 ATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNY 299
Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 300 TEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTAFDAVG 347
FP+ W + F K +PP + L+S++L Y PN R +A A+
Sbjct: 237 KP-SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 163/292 (55%), Gaps = 36/292 (12%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 126
+G G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQR--MPLIYVKLYFYQICRALAYIHN 184
+ +++LYL V E +H+ +K S +PL +K Y +Q+ + LA+ H+
Sbjct: 71 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 241
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 122 H-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 177
Query: 242 ATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNY 299
Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 300 TEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTAFDAVG 347
FP+ W + F K +PP + L+S++L Y PN R +A A+
Sbjct: 238 KP-SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 163/292 (55%), Gaps = 36/292 (12%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 126
+G G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQR--MPLIYVKLYFYQICRALAYIHN 184
+ +++LYL V E +H+ +K S +PL +K Y +Q+ + LA+ H+
Sbjct: 75 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 241
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 126 H-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLG 181
Query: 242 ATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNY 299
Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 241
Query: 300 TEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTAFDAVG 347
FP+ W + F K +PP + L+S++L Y PN R +A A+
Sbjct: 242 KP-SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 287
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 163/292 (55%), Gaps = 36/292 (12%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 126
+G G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQR--MPLIYVKLYFYQICRALAYIHN 184
+ +++LYL V E +H+ +K S +PL +K Y +Q+ + LA+ H+
Sbjct: 70 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 241
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 121 H-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLG 176
Query: 242 ATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNY 299
Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 300 TEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTAFDAVG 347
FP+ W + F K +PP + L+S++L Y PN R +A A+
Sbjct: 237 KP-SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 163/292 (55%), Gaps = 36/292 (12%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 126
+G G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQR--MPLIYVKLYFYQICRALAYIHN 184
+ +++LYL V E +H+ +K S +PL +K Y +Q+ + LA+ H+
Sbjct: 70 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 241
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 121 H-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLG 176
Query: 242 ATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNY 299
Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 300 TEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTAFDAVG 347
FP+ W + F K +PP + L+S++L Y PN R +A A+
Sbjct: 237 KP-SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 163/292 (55%), Gaps = 36/292 (12%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 126
+G G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQR--MPLIYVKLYFYQICRALAYIHN 184
+ +++LYL V E +H+ +K S +PL +K Y +Q+ + LA+ H+
Sbjct: 74 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 241
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 125 H-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLG 180
Query: 242 ATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNY 299
Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 240
Query: 300 TEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTAFDAVG 347
FP+ W + F K +PP + L+S++L Y PN R +A A+
Sbjct: 241 KP-SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 163/292 (55%), Gaps = 36/292 (12%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 126
+G G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQR--MPLIYVKLYFYQICRALAYIHN 184
+ +++LYL V E +H+ +K S +PL +K Y +Q+ + LA+ H+
Sbjct: 72 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 241
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 123 H-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLG 178
Query: 242 ATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNY 299
Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 238
Query: 300 TEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTAFDAVG 347
FP+ W + F K +PP + L+S++L Y PN R +A A+
Sbjct: 239 KP-SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 163/292 (55%), Gaps = 36/292 (12%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 126
+G G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQR--MPLIYVKLYFYQICRALAYIHN 184
+ +++LYL V E +H+ +K S +PL +K Y +Q+ + LA+ H+
Sbjct: 75 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 241
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 126 H-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 181
Query: 242 ATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNY 299
Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 241
Query: 300 TEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTAFDAVG 347
FP+ W + F K +PP + L+S++L Y PN R +A A+
Sbjct: 242 KP-SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 287
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 163/292 (55%), Gaps = 36/292 (12%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 126
+G G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQR--MPLIYVKLYFYQICRALAYIHN 184
+ +++LYL V E +H+ +K S +PL +K Y +Q+ + LA+ H+
Sbjct: 74 IHT---ENKLYL------VFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 241
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 125 H-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLG 180
Query: 242 ATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNY 299
Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 240
Query: 300 TEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTAFDAVG 347
FP+ W + F K +PP + L+S++L Y PN R +A A+
Sbjct: 241 KP-SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/292 (35%), Positives = 163/292 (55%), Gaps = 36/292 (12%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 126
+G G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQR--MPLIYVKLYFYQICRALAYIHN 184
+ +++LYL V E +H+ +K S +PL +K Y +Q+ + L++ H+
Sbjct: 71 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHS 121
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 241
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 122 H-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 177
Query: 242 ATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNY 299
Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 300 TEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTAFDAVG 347
FP+ W + F K +PP + L+S++L Y PN R +A A+
Sbjct: 238 KP-SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 162/283 (57%), Gaps = 28/283 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 127
+G G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 128 FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIG 187
+ T + + +V + + +++++K +Q + ++ + YQI R L YIH+
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 148
Query: 188 VCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 240
V HRD+KP NLL+N T LK+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 149 VLHRDLKPSNLLLNT-TXDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 241 GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----N 296
+ YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C+
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 264
Query: 297 PNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
NY P PW+++F +A+DL+ ++L ++P+ R
Sbjct: 265 RNYL-LSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKR 305
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/292 (35%), Positives = 163/292 (55%), Gaps = 36/292 (12%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 126
+G G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQR--MPLIYVKLYFYQICRALAYIHN 184
+ +++LYL V E +H+ +K S +PL +K Y +Q+ + LA+ H+
Sbjct: 72 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 241
V HRD+KP+NLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 123 H-RVLHRDLKPENLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLG 178
Query: 242 ATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNY 299
Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 238
Query: 300 TEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTAFDAVG 347
FP+ W + F K +PP + L+S++L Y PN R +A A+
Sbjct: 239 KP-SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/292 (35%), Positives = 163/292 (55%), Gaps = 36/292 (12%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 126
+G G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQR--MPLIYVKLYFYQICRALAYIHN 184
+ +++LYL V E +H+ +K S +PL +K Y +Q+ + LA+ H+
Sbjct: 71 IHT---ENKLYL------VFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 241
V HRD+KP+NLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 122 H-RVLHRDLKPENLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLG 177
Query: 242 ATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNY 299
Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 300 TEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTAFDAVG 347
FP+ W + F K +PP + L+S++L Y PN R +A A+
Sbjct: 238 KP-SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/292 (35%), Positives = 163/292 (55%), Gaps = 36/292 (12%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 126
+G G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQR--MPLIYVKLYFYQICRALAYIHN 184
+ +++LYL V E +H+ +K S +PL +K Y +Q+ + LA+ H+
Sbjct: 73 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 241
V HRD+KP+NLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 124 H-RVLHRDLKPENLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLG 179
Query: 242 ATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNY 299
Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 239
Query: 300 TEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTAFDAVG 347
FP+ W + F K +PP + L+S++L Y PN R +A A+
Sbjct: 240 KP-SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 285
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 158 bits (399), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 172/301 (57%), Gaps = 28/301 (9%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQ-DKRY----KNRELQTMRLLDHPNV 120
+ + ++G G++GVV A TGE VAIKK+ DK RE++ ++ H N+
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENI 71
Query: 121 VSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
+++ + + ++ + ++ E + +HRVI +Q + +++ + YQ RA+
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIS-----TQMLSDDHIQYFIYQTLRAVK 126
Query: 181 YIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKG-----EPN------ISYIC 229
+H + V HRD+KP NLL+N + LK+CDFG A+++ + EP + ++
Sbjct: 127 VLHGS-NVIHRDLKPSNLLINSNC-DLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVA 184
Query: 230 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP-T 288
+R+YRAPE++ + +Y+ A+D+WS GC+LAEL L +P+FPG QL+ I ++GTP +
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244
Query: 289 REEIKCM-NPNYTEF--KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDA 345
+++C+ +P E+ P A P K+F R+ P+ +DL+ R+L + P R TA +A
Sbjct: 245 DNDLRCIESPRAREYIKSLPMYPAAPLEKMF-PRVNPKGIDLLQRMLVFDPAKRITAKEA 303
Query: 346 V 346
+
Sbjct: 304 L 304
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 158 bits (399), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 171/301 (56%), Gaps = 28/301 (9%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQ-DKRY----KNRELQTMRLLDHPNV 120
+ + ++G G++GVV A TGE VAIKK+ DK RE++ ++ H N+
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENI 71
Query: 121 VSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
+++ + + ++ + ++ E + +HRVI +Q + +++ + YQ RA+
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIS-----TQMLSDDHIQYFIYQTLRAVK 126
Query: 181 YIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNIS-----------YIC 229
+H + V HRD+KP NLL+N + LK+CDFG A+++ + + S Y+
Sbjct: 127 VLHGS-NVIHRDLKPSNLLINSNC-DLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVA 184
Query: 230 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP-T 288
+R+YRAPE++ + +Y+ A+D+WS GC+LAEL L +P+FPG QL+ I ++GTP +
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244
Query: 289 REEIKCM-NPNYTEF--KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDA 345
+++C+ +P E+ P A P K+F R+ P+ +DL+ R+L + P R TA +A
Sbjct: 245 DNDLRCIESPRAREYIKSLPMYPAAPLEKMF-PRVNPKGIDLLQRMLVFDPAKRITAKEA 303
Query: 346 V 346
+
Sbjct: 304 L 304
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 158 bits (399), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 94/283 (33%), Positives = 161/283 (56%), Gaps = 28/283 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 127
+G G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 128 FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIG 187
+ T + + LV + +++++K +Q + ++ + YQI R L YIH+
Sbjct: 111 RAPTIEQMKDVYLVTHLMGADLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 164
Query: 188 VCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 240
V HRD+KP NLL+N T LK+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 165 VLHRDLKPSNLLLNT-TXDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 220
Query: 241 GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----N 296
+ YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C+
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 280
Query: 297 PNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
NY P PW+++F +A+DL+ ++L ++P+ R
Sbjct: 281 RNYL-LSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKR 321
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 158 bits (399), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 103/290 (35%), Positives = 161/290 (55%), Gaps = 32/290 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 126
+G G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTI 186
+ +++LYL V E++ + + +PLI K Y +Q+ + LA+ H+
Sbjct: 73 IHT---ENKLYL--VFEFLSMDLKDFMDASALTGIPLPLI--KSYLFQLLQGLAFCHSH- 124
Query: 187 GVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 243
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 125 RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 244 EYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTE 301
Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 241
Query: 302 FKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTAFDAVG 347
FP+ W + F K +PP + L+S++L Y PN R +A A+
Sbjct: 242 -SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 285
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 158 bits (399), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 162/283 (57%), Gaps = 28/283 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 127
+G G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 128 FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIG 187
+ T + + +V + + +++++K +Q + ++ + YQI R L YIH+
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 144
Query: 188 VCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 240
V HRD+KP NLL+N T LK+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 145 VLHRDLKPSNLLLNT-TXDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 241 GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----N 296
+ YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C+
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 260
Query: 297 PNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
NY P PW+++F +A+DL+ ++L ++P+ R
Sbjct: 261 RNYL-LSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKR 301
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 157 bits (398), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 104/292 (35%), Positives = 162/292 (55%), Gaps = 36/292 (12%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 126
+G G++GVV++A+ TGE VA+ K+ D + RE+ ++ L+HPN+V L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQR--MPLIYVKLYFYQICRALAYIHN 184
+ +++LYL V E +H+ +K S +PL +K Y +Q+ + LA+ H+
Sbjct: 71 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 241
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 122 H-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 177
Query: 242 ATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNY 299
Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 300 TEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTAFDAVG 347
FP+ W + F K +PP + L+S++L Y PN R +A A+
Sbjct: 238 KP-SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 157 bits (398), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 104/292 (35%), Positives = 162/292 (55%), Gaps = 36/292 (12%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 126
+G G++GVV++A+ TGE VA+ K+ D + RE+ ++ L+HPN+V L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQR--MPLIYVKLYFYQICRALAYIHN 184
+ +++LYL V E +H+ +K S +PL +K Y +Q+ + LA+ H+
Sbjct: 70 IHT---ENKLYL------VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFG 241
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 121 H-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 176
Query: 242 ATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNY 299
Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 300 TEFKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTAFDAVG 347
FP+ W + F K +PP + L+S++L Y PN R +A A+
Sbjct: 237 KP-SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 157 bits (398), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 102/290 (35%), Positives = 162/290 (55%), Gaps = 32/290 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 126
+G G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTI 186
+ +++LYL V E++ + + + +PLI K Y +Q+ + LA+ H+
Sbjct: 72 IHT---ENKLYL--VFEFLSMDLKKFMDASALTGIPLPLI--KSYLFQLLQGLAFCHSH- 123
Query: 187 GVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 243
V HRD+KP+NLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 124 RVLHRDLKPENLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 244 EYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTE 301
Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 302 FKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTAFDAVG 347
FP+ W + F K +PP + L+S++L Y PN R +A A+
Sbjct: 241 -SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 157 bits (398), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 102/290 (35%), Positives = 162/290 (55%), Gaps = 32/290 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 126
+G G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTI 186
+ +++LYL V E++ + + + +PLI K Y +Q+ + LA+ H+
Sbjct: 74 IHT---ENKLYL--VFEFLSMDLKKFMDASALTGIPLPLI--KSYLFQLLQGLAFCHSH- 125
Query: 187 GVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 243
V HRD+KP+NLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 126 RVLHRDLKPENLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 244 EYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTE 301
Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 302 FKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTAFDAVG 347
FP+ W + F K +PP + L+S++L Y PN R +A A+
Sbjct: 243 -SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 157 bits (398), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 162/283 (57%), Gaps = 28/283 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 127
+G G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 128 FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIG 187
+ T + + +V + + +++++K +Q + ++ + YQI R L YIH+
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 148
Query: 188 VCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 240
V HRD+KP NLL+N T LK+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 149 VLHRDLKPSNLLLNT-TXDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 241 GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----N 296
+ YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C+
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 264
Query: 297 PNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
NY P PW+++F +A+DL+ ++L ++P+ R
Sbjct: 265 RNYL-LSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKR 305
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 157 bits (398), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 103/290 (35%), Positives = 161/290 (55%), Gaps = 32/290 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 126
+G G++GVV++A+ TGE VA+KK+ D + RE+ ++ L+HPN+V L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTI 186
+ +++LYL V E++ + + +PLI K Y +Q+ + LA+ H+
Sbjct: 74 IHT---ENKLYL--VFEFLSMDLKDFMDASALTGIPLPLI--KSYLFQLLQGLAFCHSH- 125
Query: 187 GVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 243
V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G
Sbjct: 126 RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 244 EYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTE 301
Y+ A+DIWS GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 302 FKFPQIKAHPW-HKIFQKRMPP---EAVDLVSRLLQYSPNLRSTAFDAVG 347
FP+ W + F K +PP + L+S++L Y PN R +A A+
Sbjct: 243 -SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 157 bits (398), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 160/282 (56%), Gaps = 26/282 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 127
+G G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 128 FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIG 187
+ T + + +V + + +++++K +Q + ++ + YQI R L YIH+
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 146
Query: 188 VCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 240
V HRD+KP NLL+N T LK+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 147 VLHRDLKPSNLLLNT-TSDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 241 GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC---MNP 297
+ YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C +
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCGINLKA 262
Query: 298 NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
P PW+++F +A+DL+ ++L ++P+ R
Sbjct: 263 RNYLLSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKR 303
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 157 bits (397), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 162/283 (57%), Gaps = 28/283 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 127
+G G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 128 FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIG 187
+ T + + +V + + +++++K +Q + ++ + YQI R L YIH+
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 146
Query: 188 VCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 240
V HRD+KP NLL+N T LK+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 147 VLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 241 GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----N 296
+ YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C+
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 262
Query: 297 PNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
NY P PW+++F +A+DL+ ++L ++P+ R
Sbjct: 263 RNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKR 303
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 157 bits (397), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 162/283 (57%), Gaps = 28/283 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 127
+G G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 128 FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIG 187
+ T + + +V + + +++++K +Q + ++ + YQI R L YIH+
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 146
Query: 188 VCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 240
V HRD+KP NLL+N T LK+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 147 VLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 241 GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----N 296
+ YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C+
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 262
Query: 297 PNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
NY P PW+++F +A+DL+ ++L ++P+ R
Sbjct: 263 RNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKR 303
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 162/283 (57%), Gaps = 28/283 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 127
+G G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 128 FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIG 187
+ T + + +V + + +++++K +Q + ++ + YQI R L YIH+
Sbjct: 111 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 164
Query: 188 VCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 240
V HRD+KP NLL+N T LK+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 165 VLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 220
Query: 241 GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----N 296
+ YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C+
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 280
Query: 297 PNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
NY P PW+++F +A+DL+ ++L ++P+ R
Sbjct: 281 RNYL-LSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKR 321
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 162/283 (57%), Gaps = 28/283 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 127
+G G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 128 FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIG 187
+ T + + +V + + +++++K +Q + ++ + YQI R L YIH+
Sbjct: 99 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 152
Query: 188 VCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 240
V HRD+KP NLL+N T LK+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 153 VLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 208
Query: 241 GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----N 296
+ YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C+
Sbjct: 209 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 268
Query: 297 PNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
NY P PW+++F +A+DL+ ++L ++P+ R
Sbjct: 269 RNYL-LSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKR 309
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 162/283 (57%), Gaps = 28/283 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 127
+G G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 128 FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIG 187
+ T + + +V + + +++++K +Q + ++ + YQI R L YIH+
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 144
Query: 188 VCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 240
V HRD+KP NLL+N T LK+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 145 VLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 241 GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----N 296
+ YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C+
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 260
Query: 297 PNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
NY P PW+++F +A+DL+ ++L ++P+ R
Sbjct: 261 RNYL-LSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKR 301
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 162/283 (57%), Gaps = 28/283 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 127
+G G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 128 FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIG 187
+ T + + +V + + +++++K +Q + ++ + YQI R L YIH+
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 144
Query: 188 VCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 240
V HRD+KP NLL+N T LK+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 145 VLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 241 GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----N 296
+ YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C+
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 260
Query: 297 PNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
NY P PW+++F +A+DL+ ++L ++P+ R
Sbjct: 261 RNYL-LSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKR 301
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 162/283 (57%), Gaps = 28/283 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 127
+G G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 128 FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIG 187
+ T + + +V + + +++++K +Q + ++ + YQI R L YIH+
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 142
Query: 188 VCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 240
V HRD+KP NLL+N T LK+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 143 VLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 198
Query: 241 GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----N 296
+ YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C+
Sbjct: 199 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 258
Query: 297 PNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
NY P PW+++F +A+DL+ ++L ++P+ R
Sbjct: 259 RNYL-LSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKR 299
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 162/283 (57%), Gaps = 28/283 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 127
+G G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 128 FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIG 187
+ T + + +V + + +++++K +Q + ++ + YQI R L YIH+
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 149
Query: 188 VCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 240
V HRD+KP NLL+N T LK+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 150 VLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 205
Query: 241 GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----N 296
+ YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C+
Sbjct: 206 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 265
Query: 297 PNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
NY P PW+++F +A+DL+ ++L ++P+ R
Sbjct: 266 RNYL-LSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKR 306
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 162/283 (57%), Gaps = 28/283 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 127
+G G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 128 FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIG 187
+ T + + +V + + +++++K +Q + ++ + YQI R L YIH+
Sbjct: 97 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 150
Query: 188 VCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 240
V HRD+KP NLL+N T LK+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 151 VLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 206
Query: 241 GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----N 296
+ YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C+
Sbjct: 207 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 266
Query: 297 PNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
NY P PW+++F +A+DL+ ++L ++P+ R
Sbjct: 267 RNYL-LSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKR 307
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 162/283 (57%), Gaps = 28/283 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 127
+G G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 128 FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIG 187
+ T + + +V + + +++++K +Q + ++ + YQI R L YIH+
Sbjct: 88 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 141
Query: 188 VCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 240
V HRD+KP NLL+N T LK+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 142 VLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 197
Query: 241 GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----N 296
+ YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C+
Sbjct: 198 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 257
Query: 297 PNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
NY P PW+++F +A+DL+ ++L ++P+ R
Sbjct: 258 RNYL-LSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKR 298
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 162/283 (57%), Gaps = 28/283 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 127
+G G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 128 FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIG 187
+ T + + +V + + +++++K +Q + ++ + YQI R L YIH+
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 148
Query: 188 VCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 240
V HRD+KP NLL+N T LK+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 149 VLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 241 GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----N 296
+ YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C+
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 264
Query: 297 PNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
NY P PW+++F +A+DL+ ++L ++P+ R
Sbjct: 265 RNYL-LSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKR 305
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 153/278 (55%), Gaps = 21/278 (7%)
Query: 72 VVGHGSFGVVFQAKCLETGEAVAIKKVLQD------KRYKNRELQTMRLLDHPNVVSLKH 125
+VG GS+G+V + + +TG VAIKK L+ K+ RE++ ++ L H N+V+L
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 126 CFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNT 185
+K YL V E+V H ++ + V+ Y +QI + + H+
Sbjct: 92 V---CKKKKRWYL--VFEFVD---HTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSH 143
Query: 186 IGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVK-GEPNISYICSRYYRAPELIFGATE 244
+ HRDIKP+N+LV+ + +KLCDFG A+ L GE + +R+YRAPEL+ G +
Sbjct: 144 -NIIHRDIKPENILVS-QSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVK 201
Query: 245 YTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT--PTREEIKCMNPNYTEF 302
Y A+D+W+ GC++ E+ +G+PLFPG+S +DQL I+ LG P +E+ NP +
Sbjct: 202 YGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGV 261
Query: 303 KFPQIKA-HPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
+ P+IK P + + K + +DL + L P+ R
Sbjct: 262 RLPEIKEREPLERRYPK-LSEVVIDLAKKCLHIDPDKR 298
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/283 (32%), Positives = 162/283 (57%), Gaps = 28/283 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 127
+G G++G+V A VAI+K+ + + Y R L+ +++L H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 128 FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIG 187
+ T + + +V + + +++++K +Q + ++ + YQI R L YIH+
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 148
Query: 188 VCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 240
V HRD+KP NLL+N T LK+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 149 VLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 241 GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----N 296
+ YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C+
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 264
Query: 297 PNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
NY P PW+++F +A+DL+ ++L ++P+ R
Sbjct: 265 RNYL-LSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKR 305
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 161/283 (56%), Gaps = 28/283 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 127
+G G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 128 FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIG 187
+ T + + +V + + +++++K +Q + ++ + YQI R L YIH+
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 142
Query: 188 VCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 240
V HRD+KP NLL+N T LK+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 143 VLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 198
Query: 241 GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----N 296
+ YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P +E++ C+
Sbjct: 199 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCIINLKA 258
Query: 297 PNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
NY P PW+++F +A+DL+ ++L ++P+ R
Sbjct: 259 RNYL-LSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKR 299
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 161/283 (56%), Gaps = 28/283 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 127
+G G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 128 FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIG 187
+ T + + +V + + +++++K Q + ++ + YQI R L YIH+
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLK-----CQHLSNDHICYFLYQILRGLKYIHSA-N 148
Query: 188 VCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 240
V HRD+KP NLL+N T LK+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 149 VLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 241 GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----N 296
+ YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C+
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 264
Query: 297 PNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
NY P PW+++F +A+DL+ ++L ++P+ R
Sbjct: 265 RNYL-LSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKR 305
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 155 bits (392), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 170/301 (56%), Gaps = 28/301 (9%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQ-DKRY----KNRELQTMRLLDHPNV 120
+ + ++G G++GVV A TGE VAIKK+ DK RE++ ++ H N+
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENI 71
Query: 121 VSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
+++ + + ++ + ++ E + +HRVI +Q + +++ + YQ RA+
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIS-----TQMLSDDHIQYFIYQTLRAVK 126
Query: 181 YIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNIS-----------YIC 229
+H + V HRD+KP NLL+N + LK+CDFG A+++ + + S +
Sbjct: 127 VLHGS-NVIHRDLKPSNLLINSNC-DLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVA 184
Query: 230 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP-T 288
+R+YRAPE++ + +Y+ A+D+WS GC+LAEL L +P+FPG QL+ I ++GTP +
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244
Query: 289 REEIKCM-NPNYTEF--KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDA 345
+++C+ +P E+ P A P K+F R+ P+ +DL+ R+L + P R TA +A
Sbjct: 245 DNDLRCIESPRAREYIKSLPMYPAAPLEKMF-PRVNPKGIDLLQRMLVFDPAKRITAKEA 303
Query: 346 V 346
+
Sbjct: 304 L 304
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 154 bits (390), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 97/289 (33%), Positives = 157/289 (54%), Gaps = 34/289 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 126
+G G++GVV++A+ GE A+KK+ +K + RE+ ++ L H N+V L
Sbjct: 10 IGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTI 186
+ L LV E++ + + +++ + + K + Q+ +AY H+
Sbjct: 69 IHTKKR-----LVLVFEHLDQDLKKLLD---VCEGGLESVTAKSFLLQLLNGIAYCHDR- 119
Query: 187 GVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 243
V HRD+KPQNLL+N +LK+ DFG A+ G P Y I + +YRAP+++ G+
Sbjct: 120 RVLHRDLKPQNLLIN-REGELKIADFGLARAF--GIPVRKYTHEIVTLWYRAPDVLMGSK 176
Query: 244 EYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE------EIKCMNP 297
+Y+ IDIWS GC+ AE++ G PLFPG S DQL+ I ++LGTP + E+ +P
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDP 236
Query: 298 NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
N+T + + PW F K + +DL+S++L+ PN R TA A+
Sbjct: 237 NFTVY-----EPLPWES-FLKGLDESGIDLLSKMLKLDPNQRITAKQAL 279
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 154 bits (390), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 160/280 (57%), Gaps = 22/280 (7%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 127
+G G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 128 FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIG 187
+ T + + +V + + +++++K +Q + ++ + YQI R L YIH+
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 148
Query: 188 VCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY----ICSRYYRAPELIFGAT 243
V HRD+KP NLL+N T LK+CDFG A+V + + + +R+YRAPE++ +
Sbjct: 149 VLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSK 207
Query: 244 EYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----NPNY 299
YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C+ NY
Sbjct: 208 GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 267
Query: 300 TEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
P PW+++F +A+DL+ ++L ++P+ R
Sbjct: 268 L-LSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKR 305
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 154 bits (390), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 160/280 (57%), Gaps = 22/280 (7%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 127
+G G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 128 FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIG 187
+ T + + +V + + +++++K +Q + ++ + YQI R L YIH+
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 149
Query: 188 VCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY----ICSRYYRAPELIFGAT 243
V HRD+KP NLL+N T LK+CDFG A+V + + + +R+YRAPE++ +
Sbjct: 150 VLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSK 208
Query: 244 EYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----NPNY 299
YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C+ NY
Sbjct: 209 GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 268
Query: 300 TEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
P PW+++F +A+DL+ ++L ++P+ R
Sbjct: 269 L-LSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKR 306
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 154 bits (389), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 160/283 (56%), Gaps = 28/283 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 127
+G G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 128 FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIG 187
+ T + + +V + + +++++K +Q + ++ + YQI R L YIH+
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 144
Query: 188 VCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 240
V HRD+KP NLL+N T LK+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 145 VLHRDLKPSNLLLNT-TXDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 241 GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE----IKCMN 296
+ YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++E+ I
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKA 260
Query: 297 PNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
NY P PW+++F +A+DL+ ++L ++P+ R
Sbjct: 261 RNYL-LSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKR 301
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 154 bits (389), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 157/289 (54%), Gaps = 34/289 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 126
+G G++GVV++A+ GE A+KK+ +K + RE+ ++ L H N+V L
Sbjct: 10 IGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTI 186
+ L LV E++ + + +++ + + K + Q+ +AY H+
Sbjct: 69 IHTKKR-----LVLVFEHLDQDLKKLLD---VCEGGLESVTAKSFLLQLLNGIAYCHDR- 119
Query: 187 GVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 243
V HRD+KPQNLL+N +LK+ DFG A+ G P Y + + +YRAP+++ G+
Sbjct: 120 RVLHRDLKPQNLLIN-REGELKIADFGLARAF--GIPVRKYTHEVVTLWYRAPDVLMGSK 176
Query: 244 EYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE------EIKCMNP 297
+Y+ IDIWS GC+ AE++ G PLFPG S DQL+ I ++LGTP + E+ +P
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDP 236
Query: 298 NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
N+T + + PW F K + +DL+S++L+ PN R TA A+
Sbjct: 237 NFTVY-----EPLPWES-FLKGLDESGIDLLSKMLKLDPNQRITAKQAL 279
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 154 bits (389), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 157/289 (54%), Gaps = 34/289 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 126
+G G++GVV++A+ GE A+KK+ +K + RE+ ++ L H N+V L
Sbjct: 10 IGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTI 186
+ L LV E++ + + +++ + + K + Q+ +AY H+
Sbjct: 69 IHTKKR-----LVLVFEHLDQDLKKLLD---VCEGGLESVTAKSFLLQLLNGIAYCHDR- 119
Query: 187 GVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 243
V HRD+KPQNLL+N +LK+ DFG A+ G P Y + + +YRAP+++ G+
Sbjct: 120 RVLHRDLKPQNLLIN-REGELKIADFGLARAF--GIPVRKYTHEVVTLWYRAPDVLMGSK 176
Query: 244 EYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE------EIKCMNP 297
+Y+ IDIWS GC+ AE++ G PLFPG S DQL+ I ++LGTP + E+ +P
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDP 236
Query: 298 NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
N+T + + PW F K + +DL+S++L+ PN R TA A+
Sbjct: 237 NFTVY-----EPLPWES-FLKGLDESGIDLLSKMLKLDPNQRITAKQAL 279
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 142/245 (57%), Gaps = 25/245 (10%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQD------KRYKNRELQTMRLLDHPNVVSLKHC 126
+G GS+GVVF+ + +TG+ VAIKK L+ K+ RE++ ++ L HPN+V+L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQR-MPLIYVKLYFYQICRALAYIHNT 185
F + + L+LV EY TV H QR +P VK +Q +A+ + H
Sbjct: 71 F-----RRKRRLHLVFEYCDHTV----LHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH 121
Query: 186 IGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGA 242
HRD+KP+N+L+ H+ +KLCDFG A++L P+ Y + +R+YR+PEL+ G
Sbjct: 122 -NCIHRDVKPENILITKHS-VIKLCDFGFARLLTG--PSDYYDDEVATRWYRSPELLVGD 177
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT--PTREEIKCMNPNYT 300
T+Y +D+W+ GCV AELL G PL+PG+S VDQL I K LG P +++ N ++
Sbjct: 178 TQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFS 237
Query: 301 EFKFP 305
K P
Sbjct: 238 GVKIP 242
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 154/287 (53%), Gaps = 20/287 (6%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKV------LQDKRYKNRELQTMRLLDHPNVVSLK 124
R VG G++G V A + VA+KK+ L R REL+ ++ L H NV+ L
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 125 HCFF-STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
F +T+ +D + LV + ++ ++K SQ + +V+ YQ+ R L YIH
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVK-----SQALSDEHVQFLVYQLLRGLKYIH 148
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGAT 243
+ G+ HRD+KP N+ VN + +L++ DFG A+ E Y+ +R+YRAPE++
Sbjct: 149 SA-GIIHRDLKPSNVAVNEDS-ELRILDFGLARQ--ADEEMTGYVATRWYRAPEIMLNWM 204
Query: 244 EYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF- 302
Y +DIWS GC++AELL G+ LFPG +DQL I++V+GTP+ E + ++ +
Sbjct: 205 HYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTY 264
Query: 303 --KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
P + IF + P A+DL+ R+L + R +A +A+
Sbjct: 265 IQSLPPMPQKDLSSIF-RGANPLAIDLLGRMLVLDSDQRVSAAEALA 310
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/283 (32%), Positives = 159/283 (56%), Gaps = 28/283 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKV--LQDKRYKNRELQTMRLL---DHPNVVSLKHCF 127
+G G++G+V A VAIKK+ + + Y R L+ +++L H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 128 FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIG 187
+ T + + +V + + +++++K +Q + ++ + YQI R L YIH+
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 144
Query: 188 VCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELIF 240
V HRD+KP NLL+N T LK+ DFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 145 VLHRDLKPSNLLLNT-TXDLKIXDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 241 GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE----IKCMN 296
+ YT +IDIWS GC+LAE+L +P+FPG+ +DQL I+ +LG+P++E+ I
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKA 260
Query: 297 PNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
NY P PW+++F +A+DL+ ++L ++P+ R
Sbjct: 261 RNYL-LSLPHKNKVPWNRLFPN-ADSKALDLLDKMLTFNPHKR 301
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 156/292 (53%), Gaps = 23/292 (7%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKV---LQDKRYKNR---ELQTMRLLDHPN 119
+Y++ VG G++G V A +GE VAIKK+ Q + + R EL ++ + H N
Sbjct: 43 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHEN 102
Query: 120 VVSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRA 178
V+ L F + Y LV+ ++ + +++ + + ++ YQ+ +
Sbjct: 103 VIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEK------IQYLVYQMLKG 156
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNIS-YICSRYYRAPE 237
L YIH+ GV HRD+KP NL VN +LK+ DFG A+ + ++ Y+ +R+YRAPE
Sbjct: 157 LKYIHSA-GVVHRDLKPGNLAVNEDC-ELKILDFGLAR---HADAEMTGYVVTRWYRAPE 211
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 297
+I Y +DIWS GC++AE+L G+ LF G+ +DQL +I+KV G P E ++ +N
Sbjct: 212 VILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLND 271
Query: 298 NYTEF---KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
+ PQ + ++F R P+A DL+ ++L+ + R TA A+
Sbjct: 272 KAAKSYIQSLPQTPRKDFTQLF-PRASPQAADLLEKMLELDVDKRLTAAQAL 322
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 156/291 (53%), Gaps = 23/291 (7%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN-----RELQTMRLLDHPNV 120
+Y+ +G G++ V++ K T VA+K++ + RE+ ++ L H N+
Sbjct: 3 TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANI 62
Query: 121 VSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
V+L TEK L LV EY+ + + + + + + VKL+ +Q+ R LA
Sbjct: 63 VTLHDIIH--TEKS---LTLVFEYLDKDLKQYLD---DCGNIINMHNVKLFLFQLLRGLA 114
Query: 181 YIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPE 237
Y H V HRD+KPQNLL+N +LKL DFG A+ K P +Y + + +YR P+
Sbjct: 115 YCHRQ-KVLHRDLKPQNLLINERG-ELKLADFGLARA--KSIPTKTYDNEVVTLWYRPPD 170
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM-- 295
++ G+T+Y+ ID+W GC+ E+ G+PLFPG + +QL I ++LGTPT E +
Sbjct: 171 ILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILS 230
Query: 296 NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
N + + +P+ +A R+ + DL+++LLQ+ R +A DA+
Sbjct: 231 NEEFKTYNYPKYRAEALLS-HAPRLDSDGADLLTKLLQFEGRNRISAEDAM 280
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 147 bits (372), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 153/287 (53%), Gaps = 20/287 (6%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKV------LQDKRYKNRELQTMRLLDHPNVVSLK 124
R VG G++G V A + VA+KK+ L R REL+ ++ L H NV+ L
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 125 HCFF-STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
F +T+ +D + LV + ++ ++K Q + +V+ YQ+ R L YIH
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVK-----CQALSDEHVQFLVYQLLRGLKYIH 148
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGAT 243
+ G+ HRD+KP N+ VN + +L++ DFG A+ E Y+ +R+YRAPE++
Sbjct: 149 SA-GIIHRDLKPSNVAVNEDS-ELRILDFGLARQ--ADEEMTGYVATRWYRAPEIMLNWM 204
Query: 244 EYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF- 302
Y +DIWS GC++AELL G+ LFPG +DQL I++V+GTP+ E + ++ +
Sbjct: 205 HYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTY 264
Query: 303 --KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
P + IF + P A+DL+ R+L + R +A +A+
Sbjct: 265 IQSLPPMPQKDLSSIF-RGANPLAIDLLGRMLVLDSDQRVSAAEALA 310
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 147 bits (372), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 156/292 (53%), Gaps = 23/292 (7%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKV---LQDKRYKNR---ELQTMRLLDHPN 119
+Y++ VG G++G V A +GE VAIKK+ Q + + R EL ++ + H N
Sbjct: 25 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHEN 84
Query: 120 VVSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRA 178
V+ L F + Y LV+ ++ + +++ + + ++ YQ+ +
Sbjct: 85 VIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEK------IQYLVYQMLKG 138
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNIS-YICSRYYRAPE 237
L YIH+ GV HRD+KP NL VN +LK+ DFG A+ + ++ Y+ +R+YRAPE
Sbjct: 139 LKYIHSA-GVVHRDLKPGNLAVNEDC-ELKILDFGLAR---HADAEMTGYVVTRWYRAPE 193
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 297
+I Y +DIWS GC++AE+L G+ LF G+ +DQL +I+KV G P E ++ +N
Sbjct: 194 VILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLND 253
Query: 298 NYTEF---KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
+ PQ + ++F R P+A DL+ ++L+ + R TA A+
Sbjct: 254 KAAKSYIQSLPQTPRKDFTQLF-PRASPQAADLLEKMLELDVDKRLTAAQAL 304
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/289 (34%), Positives = 156/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 89 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 141
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + Y+ +R+YRAPE++ A
Sbjct: 142 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNA 197
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 258 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 304
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 152/287 (52%), Gaps = 20/287 (6%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKV------LQDKRYKNRELQTMRLLDHPNVVSLK 124
R VG G++G V A + VA+KK+ L R REL+ ++ L H NV+ L
Sbjct: 26 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 125 HCFF-STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
F +T+ +D + LV + ++ ++K Q + +V+ YQ+ R L YIH
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLMGADLNNIVK-----CQALSDEHVQFLVYQLLRGLKYIH 140
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGAT 243
+ G+ HRD+KP N+ VN +L++ DFG A+ E Y+ +R+YRAPE++
Sbjct: 141 SA-GIIHRDLKPSNVAVNEDC-ELRILDFGLARQ--ADEEMTGYVATRWYRAPEIMLNWM 196
Query: 244 EYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF- 302
Y +DIWS GC++AELL G+ LFPG +DQL I++V+GTP+ E + ++ +
Sbjct: 197 HYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTY 256
Query: 303 --KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
P + IF + P A+DL+ R+L + R +A +A+
Sbjct: 257 IQSLPPMPQKDLSSIF-RGANPLAIDLLGRMLVLDSDQRVSAAEALA 302
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 156/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K SQ++ +V+ YQI R L YI
Sbjct: 89 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----SQKLTDDHVQFLIYQILRGLKYI 141
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN + +LK+ DFG + + Y+ +R+YRAPE++
Sbjct: 142 HSA-DIIHRDLKPSNLAVNEDS-ELKILDFGLCRH--TDDEMTGYVATRWYRAPEIMLNW 197
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 258 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 304
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 156/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 94
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 95 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 147
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN + +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 148 HSA-DIIHRDLKPSNLAVNEDS-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNW 203
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 263
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 264 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 310
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 156/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 90
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 91 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 143
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN + +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 144 HSA-DIIHRDLKPSNLAVNEDS-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNW 199
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 259
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 260 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 306
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 145 bits (365), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 89 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----XQKLTDDHVQFLIYQILRGLKYI 141
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 142 HSA-DIIHRDLKPSNLAVN-EDXELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNW 197
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 258 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 304
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 145 bits (365), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 108
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 109 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 161
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 162 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNW 217
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 277
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 278 YIQ-SLAQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 324
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 89 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 141
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 142 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNW 197
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 258 YIQ-SLAQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 304
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 152/290 (52%), Gaps = 34/290 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 126
+G G++G VF+AK ET E VA+K+V D + RE+ ++ L H N+V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTI 186
S + L LV E+ + + K+ + + VK + +Q+ + L + H+
Sbjct: 70 LHSDKK-----LTLVFEFCDQDLK---KYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR- 120
Query: 187 GVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 243
V HRD+KPQNLL+N +LKL +FG A+ G P Y + + +YR P+++FGA
Sbjct: 121 NVLHRDLKPQNLLIN-RNGELKLANFGLARAF--GIPVRCYSAEVVTLWYRPPDVLFGAK 177
Query: 244 EYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 302
Y+ +ID+WSAGC+ AEL G+PLFPG DQL I ++LGTPT E+ M
Sbjct: 178 LYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMT------ 231
Query: 303 KFPQIKAHPWHKIFQK------RMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
K P K +P + ++ DL+ LL+ +P R +A +A+
Sbjct: 232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEAL 281
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 107
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 108 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 160
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 161 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNW 216
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 217 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 276
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 277 YIQ-SLAQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 323
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 144 bits (364), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 151/290 (52%), Gaps = 34/290 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 126
+G G++G VF+AK ET E VA+K+V D + RE+ ++ L H N+V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTI 186
S + L LV E+ + + K+ + + VK + +Q+ + L + H+
Sbjct: 70 LHSDKK-----LTLVFEFCDQDLK---KYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR- 120
Query: 187 GVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGAT 243
V HRD+KPQNLL+N +LKL DFG A+ G P Y + + +YR P+++FGA
Sbjct: 121 NVLHRDLKPQNLLIN-RNGELKLADFGLARAF--GIPVRCYSAEVVTLWYRPPDVLFGAK 177
Query: 244 EYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 302
Y+ +ID+WSAGC+ AEL +PLFPG DQL I ++LGTPT E+ M
Sbjct: 178 LYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMT------ 231
Query: 303 KFPQIKAHPWHKIFQK------RMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
K P K +P + ++ DL+ LL+ +P R +A +A+
Sbjct: 232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEAL 281
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 144 bits (364), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 94
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 95 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 147
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 148 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNW 203
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 263
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 264 YIQ-SLAQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 310
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 144 bits (364), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 98
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 99 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 151
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 152 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNW 207
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 208 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 267
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 268 YIQ-SLAQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 314
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 84
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 85 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 137
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 138 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNW 193
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 253
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 254 YIQ-SLAQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 300
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 99
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 100 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 152
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 153 HSA-DIIHRDLKPSNLAVN-EDXELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNW 208
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 209 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 268
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 269 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 315
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 144 bits (363), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 93
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 94 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 146
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 147 HSA-DIIHRDLKPSNLAVN-EDXELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNW 202
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 262
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 263 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 309
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 144 bits (363), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 95
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 96 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 148
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 149 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TADEMTGYVATRWYRAPEIMLNW 204
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 264
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 265 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 311
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 144 bits (363), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 89 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----XQKLTDDHVQFLIYQILRGLKYI 141
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 142 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNW 197
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 258 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 304
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 144 bits (363), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 95
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 96 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 148
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 149 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TADEMTGYVATRWYRAPEIMLNW 204
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 264
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 265 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 311
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 144 bits (363), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 95
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 96 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 148
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 149 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TADEMTGYVATRWYRAPEIMLNW 204
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 264
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 265 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 311
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 144 bits (363), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 90
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 91 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 143
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 144 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNW 199
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 259
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 260 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 306
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 144 bits (363), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 108
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 109 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 161
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 162 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNW 217
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 277
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 278 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 324
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 144 bits (362), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 100
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 101 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 153
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 154 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNW 209
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 269
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 270 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 316
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 144 bits (362), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 100
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 101 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 153
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 154 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNW 209
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 269
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 270 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 316
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 144 bits (362), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 100
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 101 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 153
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 154 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNW 209
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 269
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 270 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 316
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 144 bits (362), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 93
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 94 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 146
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 147 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNW 202
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 262
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 263 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 309
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 144 bits (362), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 107
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 108 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 160
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 161 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNW 216
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 217 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 276
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 277 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 323
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 144 bits (362), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 89 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 141
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 142 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNW 197
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 258 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 304
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 144 bits (362), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 90
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 91 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 143
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 144 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNW 199
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 259
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 260 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 306
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 144 bits (362), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 89 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 141
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 142 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNW 197
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 258 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 304
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 144 bits (362), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 89 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 141
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 142 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNW 197
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 258 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 304
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 144 bits (362), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 89 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 141
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 142 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNW 197
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 258 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 304
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 144 bits (362), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
+G G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 93
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 94 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 146
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 147 HSA-DIIHRDLKPSNLAVN-EDXELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNW 202
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 262
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 263 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 309
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 144 bits (362), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 94
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 95 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 147
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 148 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNW 203
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 263
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 264 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 310
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 144 bits (362), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 99
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 100 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 152
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 153 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNW 208
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 209 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 268
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 269 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 315
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 89 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 141
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 142 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNW 197
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 258 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 304
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 111
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 112 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 164
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 165 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNW 220
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 221 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 280
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 281 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 327
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 111
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 112 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 164
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 165 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMXGYVATRWYRAPEIMLNW 220
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 221 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 280
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 281 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 327
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 95
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 96 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 148
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 149 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNW 204
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 264
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 265 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 311
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 89 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 141
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 142 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNW 197
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 258 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 304
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 93
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 94 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 146
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 147 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNW 202
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 262
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 263 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 309
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 87
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 88 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 140
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 141 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNW 196
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 197 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 256
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 257 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 303
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 85
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 86 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 138
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 139 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNW 194
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 195 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 254
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 255 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 301
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/286 (33%), Positives = 147/286 (51%), Gaps = 22/286 (7%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKV---LQDKRYKNRELQTMRLLDH---PNVVSLKHC 126
VG G++G V A TG VAIKK+ Q + + R + +RLL H NV+ L
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 127 FFSTTEKDELY-LNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNT 185
F D+ LV+ ++ + +++KH R ++ YQ+ + L YIH
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDR-----IQFLVYQMLKGLRYIH-A 146
Query: 186 IGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 245
G+ HRD+KP NL VN +LK+ DFG A+ + +R+YRAPE+I Y
Sbjct: 147 AGIIHRDLKPGNLAVNEDC-ELKILDFGLARQ--ADSEMXGXVVTRWYRAPEVILNWMRY 203
Query: 246 TAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTE 301
T +DIWS GC++AE++ G+ LF G +DQL EI+KV GTP E ++ + NY +
Sbjct: 204 TQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMK 263
Query: 302 FKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
P+++ + I P AV+L+ ++L R TA +A+
Sbjct: 264 -GLPELEKKDFASILTN-ASPLAVNLLEKMLVLDAEQRVTAGEALA 307
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 89 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 141
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 142 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNW 197
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 258 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 304
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 90
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 91 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 143
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 144 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNW 199
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 259
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 260 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 306
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 86
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 87 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 139
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 140 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNW 195
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 196 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 255
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 256 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 302
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 84
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 85 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 137
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 138 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNW 193
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 253
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 254 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 300
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 85
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 86 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 138
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 139 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNW 194
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 195 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 254
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 255 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 301
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 94
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 95 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 147
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 148 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNW 203
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 263
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 264 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 310
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 152/287 (52%), Gaps = 24/287 (8%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V + +++G +A+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 117
Query: 126 CFFSTTEKDELY-LNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN 184
F T +E + LV + ++ ++K Q++ +V+ YQI R L YIH+
Sbjct: 118 VFTPATSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHS 172
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 244
+ HRD+KP NL VN +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 173 A-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMH 228
Query: 245 YTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYT 300
Y +DIWS GC++AELL G+ LFPG ++QL +I+++ GTP I M NY
Sbjct: 229 YNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMPSHEARNYI 288
Query: 301 EFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
PQ+ + +F P AVDL+ ++L + R TA +A+
Sbjct: 289 N-SLPQMPKRNFADVFIG-ANPLAVDLLEKMLVLDTDKRITASEALA 333
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 89 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 141
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + ++ +R+YRAPE++
Sbjct: 142 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMAGFVATRWYRAPEIMLNW 197
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 258 YIQ-SLAQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 304
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 84
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 85 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 137
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + ++ +R+YRAPE++
Sbjct: 138 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMAGFVATRWYRAPEIMLNW 193
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 253
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 254 YIQ-SLAQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 300
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 89 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 141
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + ++ +R+YRAPE++
Sbjct: 142 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMAGFVATRWYRAPEIMLNW 197
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 258 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 304
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 89 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 141
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ D+G A+ + Y+ +R+YRAPE++
Sbjct: 142 HSA-DIIHRDLKPSNLAVNEDC-ELKILDYGLARH--TDDEMTGYVATRWYRAPEIMLNW 197
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 258 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 304
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 154/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 84
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K ++ +V+ YQI R L YI
Sbjct: 85 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CAKLTDDHVQFLIYQILRGLKYI 137
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + Y+ +R+YRAPE++
Sbjct: 138 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNW 193
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 253
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 254 YIQ-SLAQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 300
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/311 (32%), Positives = 164/311 (52%), Gaps = 48/311 (15%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKVL----QDKRYKNRELQTMRLLDHPNVV- 121
YM + +G G G+VF A + + VAIKK++ Q ++ RE++ +R LDH N+V
Sbjct: 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVK 72
Query: 122 ----------SLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLI--YVK 169
L S TE + +Y+ V EY+ + V+ ++ PL+ + +
Sbjct: 73 VFEILGPSGSQLTDDVGSLTELNSVYI--VQEYMETDLANVL-------EQGPLLEEHAR 123
Query: 170 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY-- 227
L+ YQ+ R L YIH+ V HRD+KP NL +N LK+ DFG A+++ +P+ S+
Sbjct: 124 LFMYQLLRGLKYIHSA-NVLHRDLKPANLFINTEDLVLKIGDFGLARIM---DPHYSHKG 179
Query: 228 -----ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQL---VE 279
+ +++YR+P L+ YT AID+W+AGC+ AE+L G+ LF G ++Q+ +E
Sbjct: 180 HLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILE 239
Query: 280 IIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPP---EAVDLVSRLLQYSP 336
I V+ R+E+ + P Y + HK + +P EAVD + ++L +SP
Sbjct: 240 SIPVVHEEDRQELLSVIPVYIRNDMTEP-----HKPLTQLLPGISREAVDFLEQILTFSP 294
Query: 337 NLRSTAFDAVG 347
R TA +A+
Sbjct: 295 MDRLTAEEALS 305
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 141 bits (356), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 154/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 108
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 109 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 161
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + + +R+YRAPE++
Sbjct: 162 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMXGXVATRWYRAPEIMLNW 217
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 277
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 278 YIQ-SLAQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 324
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 154/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 89 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 141
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DF A+ + Y+ +R+YRAPE++
Sbjct: 142 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFYLARH--TDDEMTGYVATRWYRAPEIMLNW 197
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 258 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 304
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 140 bits (354), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 154/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 89 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 141
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ FG A+ + Y+ +R+YRAPE++
Sbjct: 142 HSA-DIIHRDLKPSNLAVNEDC-ELKILGFGLARH--TDDEMTGYVATRWYRAPEIMLNW 197
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 258 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 304
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 140 bits (354), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 154/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 89 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 141
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ DFG A+ + + +R+YRAPE++
Sbjct: 142 HSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGXVATRWYRAPEIMLNW 197
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 258 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 304
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 154/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 89 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 141
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ D G A+ + Y+ +R+YRAPE++
Sbjct: 142 HSA-DIIHRDLKPSNLAVNEDC-ELKILDAGLARH--TDDEMTGYVATRWYRAPEIMLNW 197
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 258 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 304
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 154/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 89 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 141
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ D G A+ + Y+ +R+YRAPE++
Sbjct: 142 HSA-DIIHRDLKPSNLAVNEDC-ELKILDRGLARH--TDDEMTGYVATRWYRAPEIMLNW 197
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 258 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 304
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 154/289 (53%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKK-------VLQDKRYKNRELQTMRLLDHPNVVSLKH 125
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV+ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 126 CFF---STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F S E +++YL V + ++ ++K Q++ +V+ YQI R L YI
Sbjct: 89 VFTPARSLEEFNDVYL--VTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYI 141
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ + HRD+KP NL VN +LK+ D G A+ + Y+ +R+YRAPE++
Sbjct: 142 HSA-DIIHRDLKPSNLAVNEDC-ELKILDGGLARH--TDDEMTGYVATRWYRAPEIMLNW 197
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----N 298
Y +DIWS GC++AELL G+ LFPG +DQL I++++GTP E +K ++ N
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + Q+ + +F P AVDL+ ++L + R TA A+
Sbjct: 258 YIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALA 304
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 138 bits (347), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 155/293 (52%), Gaps = 32/293 (10%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN-----RELQTMRLLDHPNVVSLKHCF 127
+G+G++ V++ TG VA+K+V D RE+ M+ L H N+V L
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI 72
Query: 128 FSTTEKDELYLNLVLEYVPETVHRVIKHHY--KMSQRMPLIYVKLYFYQICRALAYIHNT 185
+ + L LV E++ + + + + + L VK + +Q+ + LA+ H
Sbjct: 73 HTENK-----LTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN 127
Query: 186 IGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGA 242
+ HRD+KPQNLL+N QLKL DFG A+ G P ++ + + +YRAP+++ G+
Sbjct: 128 -KILHRDLKPQNLLINKRG-QLKLGDFGLARAF--GIPVNTFSSEVVTLWYRAPDVLMGS 183
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 302
Y+ +IDIWS GC+LAE++ G+PLFPG + +QL I ++GTP + + P+ T+
Sbjct: 184 RTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPN----ESLWPSVTKL 239
Query: 303 -KF-PQIKAHPWHKIFQKRMP-------PEAVDLVSRLLQYSPNLRSTAFDAV 346
K+ P I+ P + Q P +D + LLQ +P++R +A A+
Sbjct: 240 PKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQAL 292
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 130 bits (328), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 154/302 (50%), Gaps = 19/302 (6%)
Query: 57 KNGQPKQTISYMAERVVGHGSFGVVFQAKCLETG-EAVAIKKVLQDKRYKNRELQTMR-- 113
K+G + Y +G G++G VF+A+ L+ G VA+K+V + L T+R
Sbjct: 3 KDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREV 62
Query: 114 -------LLDHPNVVSL-KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPL 165
+HPNVV L C S T++ E L LV E+V + + + + +P
Sbjct: 63 AVLRHLETFEHPNVVRLFDVCTVSRTDR-ETKLTLVFEHVDQDLTTYLDKVPEPG--VPT 119
Query: 166 IYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI 225
+K +Q+ R L ++H+ V HRD+KPQN+LV + Q+KL DFG A++
Sbjct: 120 ETIKDMMFQLLRGLDFLHSH-RVVHRDLKPQNILVT-SSGQIKLADFGLARIYSFQMALT 177
Query: 226 SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLG 285
S + + +YRAPE++ ++ Y +D+WS GC+ AE+ +PLF G S VDQL +I+ V+G
Sbjct: 178 SVVVTLWYRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIG 236
Query: 286 TPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDA 345
P E+ + F A P K F + DL+ + L ++P R +A+ A
Sbjct: 237 LPGEEDWP-RDVALPRQAFHSKSAQPIEK-FVTDIDELGKDLLLKCLTFNPAKRISAYSA 294
Query: 346 VG 347
+
Sbjct: 295 LS 296
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 130 bits (328), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 145/294 (49%), Gaps = 30/294 (10%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKV------------LQDKRYKNRELQTMRL 114
Y +R + GS+G V A G VAIK+V L D R L+ +RL
Sbjct: 24 YTVQRFISSGSYGAVC-AGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 115 LDH---PNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLI--YVK 169
L+H PN++ L+ F E L LV E + + +VI QR+ + +++
Sbjct: 83 LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIH-----DQRIVISPQHIQ 137
Query: 170 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 229
+ Y I L +H GV HRD+ P N+L+ + + +CDF A+ Y+
Sbjct: 138 YFMYHILLGLHVLHEA-GVVHRDLHPGNILL-ADNNDITICDFNLAREDTADANKTHYVT 195
Query: 230 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 289
R+YRAPEL+ +T +D+WSAGCV+AE+ + LF G + +QL +I++V+GTP
Sbjct: 196 HRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKI 255
Query: 290 EEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
E++ + +Y + A W + P A+DL++++L+++P R
Sbjct: 256 EDVVMFSSPSARDYLRNSLSNVPARAWTAVVPT-ADPVALDLIAKMLEFNPQRR 308
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 130 bits (328), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 145/294 (49%), Gaps = 30/294 (10%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKV------------LQDKRYKNRELQTMRL 114
Y +R + GS+G V A G VAIK+V L D R L+ +RL
Sbjct: 24 YTVQRFISSGSYGAVC-AGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 115 LDH---PNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLI--YVK 169
L+H PN++ L+ F E L LV E + + +VI QR+ + +++
Sbjct: 83 LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIH-----DQRIVISPQHIQ 137
Query: 170 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 229
+ Y I L +H GV HRD+ P N+L+ + + +CDF A+ Y+
Sbjct: 138 YFMYHILLGLHVLHEA-GVVHRDLHPGNILL-ADNNDITICDFNLAREDTADANKTHYVT 195
Query: 230 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 289
R+YRAPEL+ +T +D+WSAGCV+AE+ + LF G + +QL +I++V+GTP
Sbjct: 196 HRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKI 255
Query: 290 EEIKCMNP----NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
E++ + +Y + A W + P A+DL++++L+++P R
Sbjct: 256 EDVVMFSSPSARDYLRNSLSNVPARAWTAVVPT-ADPVALDLIAKMLEFNPQRR 308
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 130 bits (328), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 154/302 (50%), Gaps = 19/302 (6%)
Query: 57 KNGQPKQTISYMAERVVGHGSFGVVFQAKCLETG-EAVAIKKVLQDKRYKNRELQTMR-- 113
K+G + Y +G G++G VF+A+ L+ G VA+K+V + L T+R
Sbjct: 3 KDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREV 62
Query: 114 -------LLDHPNVVSL-KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPL 165
+HPNVV L C S T++ E L LV E+V + + + + +P
Sbjct: 63 AVLRHLETFEHPNVVRLFDVCTVSRTDR-ETKLTLVFEHVDQDLTTYLDKVPEPG--VPT 119
Query: 166 IYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI 225
+K +Q+ R L ++H+ V HRD+KPQN+LV + Q+KL DFG A++
Sbjct: 120 ETIKDMMFQLLRGLDFLHSH-RVVHRDLKPQNILVT-SSGQIKLADFGLARIYSFQMALT 177
Query: 226 SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLG 285
S + + +YRAPE++ ++ Y +D+WS GC+ AE+ +PLF G S VDQL +I+ V+G
Sbjct: 178 SVVVTLWYRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIG 236
Query: 286 TPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDA 345
P E+ + F A P K F + DL+ + L ++P R +A+ A
Sbjct: 237 LPGEEDWP-RDVALPRQAFHSKSAQPIEK-FVTDIDELGKDLLLKCLTFNPAKRISAYSA 294
Query: 346 VG 347
+
Sbjct: 295 LS 296
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 130 bits (328), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 154/301 (51%), Gaps = 19/301 (6%)
Query: 57 KNGQPKQTISYMAERVVGHGSFGVVFQAKCLETG-EAVAIKKVLQDKRYKNRELQTMR-- 113
K+G + Y +G G++G VF+A+ L+ G VA+K+V + L T+R
Sbjct: 3 KDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREV 62
Query: 114 -------LLDHPNVVSL-KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPL 165
+HPNVV L C S T++ E L LV E+V + + + + +P
Sbjct: 63 AVLRHLETFEHPNVVRLFDVCTVSRTDR-ETKLTLVFEHVDQDLTTYLDKVPEPG--VPT 119
Query: 166 IYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI 225
+K +Q+ R L ++H+ V HRD+KPQN+LV + Q+KL DFG A++
Sbjct: 120 ETIKDMMFQLLRGLDFLHSH-RVVHRDLKPQNILVT-SSGQIKLADFGLARIYSFQMALT 177
Query: 226 SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLG 285
S + + +YRAPE++ ++ Y +D+WS GC+ AE+ +PLF G S VDQL +I+ V+G
Sbjct: 178 SVVVTLWYRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIG 236
Query: 286 TPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDA 345
P E+ + F A P K F + DL+ + L ++P R +A+ A
Sbjct: 237 LPGEEDWP-RDVALPRQAFHSKSAQPIEK-FVTDIDELGKDLLLKCLTFNPAKRISAYSA 294
Query: 346 V 346
+
Sbjct: 295 L 295
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 154/304 (50%), Gaps = 37/304 (12%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 120
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNI 85
Query: 121 VSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIK---HHYKMSQRMPLIYVKLYFYQIC 176
+SL + F +E + LV+E + + +VI+ H +MS YQ+
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMS---------YLLYQML 136
Query: 177 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAP 236
+ ++H+ G+ HRD+KP N++V LK+ DFG A+ Y+ +RYYRAP
Sbjct: 137 XGIKHLHSA-GIIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 296
E+I G Y +DIWS GC++ E++ + LFPG +DQ ++I+ LGTP E +K +
Sbjct: 195 EVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 253
Query: 297 P---NYTEFKFPQIKAHPWHKIFQKRMPP-----------EAVDLVSRLLQYSPNLRSTA 342
P NY E + P+ + K+F + P +A DL+S++L P R +
Sbjct: 254 PTVRNYVENR-PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 312
Query: 343 FDAV 346
DA+
Sbjct: 313 DDAL 316
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 154/304 (50%), Gaps = 37/304 (12%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 120
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 121 VSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIK---HHYKMSQRMPLIYVKLYFYQIC 176
+SL + F +E + LV+E + + +VI+ H +MS YQ+
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMS---------YLLYQML 136
Query: 177 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAP 236
+ ++H+ G+ HRD+KP N++V LK+ DFG A+ Y+ +RYYRAP
Sbjct: 137 XGIKHLHSA-GIIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 296
E+I G Y +DIWS GC++ E++ + LFPG +DQ ++I+ LGTP E +K +
Sbjct: 195 EVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 253
Query: 297 P---NYTEFKFPQIKAHPWHKIFQKRMPP-----------EAVDLVSRLLQYSPNLRSTA 342
P NY E + P+ + K+F + P +A DL+S++L P R +
Sbjct: 254 PTVRNYVENR-PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 312
Query: 343 FDAV 346
DA+
Sbjct: 313 DDAL 316
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 154/304 (50%), Gaps = 37/304 (12%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 120
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 78
Query: 121 VSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIK---HHYKMSQRMPLIYVKLYFYQIC 176
+SL + F +E + LV+E + + +VI+ H +MS YQ+
Sbjct: 79 ISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMS---------YLLYQML 129
Query: 177 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAP 236
+ ++H+ G+ HRD+KP N++V LK+ DFG A+ Y+ +RYYRAP
Sbjct: 130 XGIKHLHSA-GIIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPYVVTRYYRAP 187
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 296
E+I G Y +DIWS GC++ E++ + LFPG +DQ ++I+ LGTP E +K +
Sbjct: 188 EVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 246
Query: 297 P---NYTEFKFPQIKAHPWHKIFQKRMPP-----------EAVDLVSRLLQYSPNLRSTA 342
P NY E + P+ + K+F + P +A DL+S++L P R +
Sbjct: 247 PTVRNYVENR-PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 305
Query: 343 FDAV 346
DA+
Sbjct: 306 DDAL 309
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 154/301 (51%), Gaps = 31/301 (10%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 120
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNI 85
Query: 121 VSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRAL 179
+SL + F +E + LV+E + + +VI+ +RM + YQ+ +
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELD-HERMSYL-----LYQMLCGI 139
Query: 180 AYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 239
++H+ G+ HRD+KP N++V LK+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 140 KHLHSA-GIIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 240 FGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP-- 297
G Y +DIWS GC++ E++ + LFPG +DQ ++I+ LGTP E +K + P
Sbjct: 198 LGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 256
Query: 298 -NYTEFKFPQIKAHPWHKIFQKRMPP-----------EAVDLVSRLLQYSPNLRSTAFDA 345
NY E + P+ + K+F + P +A DL+S++L P R + DA
Sbjct: 257 RNYVENR-PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 315
Query: 346 V 346
+
Sbjct: 316 L 316
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 152/289 (52%), Gaps = 28/289 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 126
+G G++G V++A T E VAIK++ + + RE+ ++ L H N++ LK
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSV 101
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTI 186
L+L+ EY + + + + +S R+ +K + YQ+ + + H+
Sbjct: 102 IHHNHR-----LHLIFEYAENDLKKYMDKNPDVSMRV----IKSFLYQLINGVNFCHSR- 151
Query: 187 GVCHRDIKPQNLLVN----PHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELI 239
HRD+KPQNLL++ T LK+ DFG A+ G P + I + +YR PE++
Sbjct: 152 RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF--GIPIRQFTHEIITLWYRPPEIL 209
Query: 240 FGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--P 297
G+ Y+ ++DIWS C+ AE+L+ PLFPG+S +DQL +I +VLG P + P
Sbjct: 210 LGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALP 269
Query: 298 NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
++ + FP+ + ++ + E +DL++ +L+ P R +A +A+
Sbjct: 270 DWKQ-SFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNAL 317
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 127 bits (320), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 154/301 (51%), Gaps = 31/301 (10%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 120
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNI 85
Query: 121 VSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRAL 179
+SL + F +E + LV+E + + +VI+ +RM + YQ+ +
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYL-----LYQMLCGI 139
Query: 180 AYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 239
++H+ G+ HRD+KP N++V LK+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 140 KHLHSA-GIIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 240 FGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP-- 297
G Y +DIWS GC++ E++ + LFPG +DQ ++I+ LGTP E +K + P
Sbjct: 198 LGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 256
Query: 298 -NYTEFKFPQIKAHPWHKIFQKRMPP-----------EAVDLVSRLLQYSPNLRSTAFDA 345
NY E + P+ + K+F + P +A DL+S++L P R + DA
Sbjct: 257 RNYVENR-PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 315
Query: 346 V 346
+
Sbjct: 316 L 316
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 154/304 (50%), Gaps = 37/304 (12%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 120
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 123
Query: 121 VSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIK---HHYKMSQRMPLIYVKLYFYQIC 176
+SL + F +E + LV+E + + +VI+ H +MS YQ+
Sbjct: 124 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS---------YLLYQML 174
Query: 177 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAP 236
+ ++H+ G+ HRD+KP N++V LK+ DFG A+ Y+ +RYYRAP
Sbjct: 175 CGIKHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAP 232
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 296
E+I G Y +DIWS GC++ E++ + LFPG +DQ ++I+ LGTP E +K +
Sbjct: 233 EVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 291
Query: 297 P---NYTEFKFPQIKAHPWHKIFQKRMPP-----------EAVDLVSRLLQYSPNLRSTA 342
P NY E + P+ + K+F + P +A DL+S++L P R +
Sbjct: 292 PTVRNYVENR-PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 350
Query: 343 FDAV 346
DA+
Sbjct: 351 DDAL 354
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 158/303 (52%), Gaps = 35/303 (11%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 120
Y + +G G+ G+V A G VA+KK+ Q++ + R EL ++ ++H N+
Sbjct: 26 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI 85
Query: 121 VSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRAL 179
+SL + F +E + LV+E + + +VI H +RM + YQ+ +
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-HMELDHERMSYL-----LYQMLCGI 139
Query: 180 AYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 239
++H+ G+ HRD+KP N++V LK+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 140 KHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTACTNFMMTPYVVTRYYRAPEVI 197
Query: 240 FGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP-- 297
G Y A +DIWS GC++ EL+ G +F G +DQ ++I+ LGTP+ E + + P
Sbjct: 198 LGMG-YAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTV 256
Query: 298 -NYTEF--KFPQIKAHPWHKIFQKRMPP-----------EAVDLVSRLLQYSPNLRSTAF 343
NY E K+P IK + ++F + P +A DL+S++L P+ R +
Sbjct: 257 RNYVENRPKYPGIK---FEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVD 313
Query: 344 DAV 346
+A+
Sbjct: 314 EAL 316
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 154/304 (50%), Gaps = 37/304 (12%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 120
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 123
Query: 121 VSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIK---HHYKMSQRMPLIYVKLYFYQIC 176
+SL + F +E + LV+E + + +VI+ H +MS YQ+
Sbjct: 124 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS---------YLLYQML 174
Query: 177 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAP 236
+ ++H+ G+ HRD+KP N++V LK+ DFG A+ Y+ +RYYRAP
Sbjct: 175 CGIKHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAP 232
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 296
E+I G Y +DIWS GC++ E++ + LFPG +DQ ++I+ LGTP E +K +
Sbjct: 233 EVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 291
Query: 297 P---NYTEFKFPQIKAHPWHKIFQKRMPP-----------EAVDLVSRLLQYSPNLRSTA 342
P NY E + P+ + K+F + P +A DL+S++L P R +
Sbjct: 292 PTVRNYVENR-PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 350
Query: 343 FDAV 346
DA+
Sbjct: 351 DDAL 354
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 154/304 (50%), Gaps = 37/304 (12%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 120
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 121 VSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIK---HHYKMSQRMPLIYVKLYFYQIC 176
+SL + F +E + LV+E + + +VI+ H +MS YQ+
Sbjct: 87 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS---------YLLYQML 137
Query: 177 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAP 236
+ ++H+ G+ HRD+KP N++V LK+ DFG A+ Y+ +RYYRAP
Sbjct: 138 CGIKHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAP 195
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 296
E+I G Y +DIWS GC++ E++ + LFPG +DQ ++I+ LGTP E +K +
Sbjct: 196 EVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 254
Query: 297 P---NYTEFKFPQIKAHPWHKIFQKRMPP-----------EAVDLVSRLLQYSPNLRSTA 342
P NY E + P+ + K+F + P +A DL+S++L P R +
Sbjct: 255 PTVRNYVENR-PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 313
Query: 343 FDAV 346
DA+
Sbjct: 314 DDAL 317
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 154/304 (50%), Gaps = 37/304 (12%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 120
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 121 VSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIK---HHYKMSQRMPLIYVKLYFYQIC 176
+SL + F +E + LV+E + + +VI+ H +MS YQ+
Sbjct: 87 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS---------YLLYQML 137
Query: 177 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAP 236
+ ++H+ G+ HRD+KP N++V LK+ DFG A+ Y+ +RYYRAP
Sbjct: 138 CGIKHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAP 195
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 296
E+I G Y +DIWS GC++ E++ + LFPG +DQ ++I+ LGTP E +K +
Sbjct: 196 EVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 254
Query: 297 P---NYTEFKFPQIKAHPWHKIFQKRMPP-----------EAVDLVSRLLQYSPNLRSTA 342
P NY E + P+ + K+F + P +A DL+S++L P R +
Sbjct: 255 PTVRNYVENR-PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 313
Query: 343 FDAV 346
DA+
Sbjct: 314 DDAL 317
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 154/304 (50%), Gaps = 37/304 (12%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 120
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 121 VSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIK---HHYKMSQRMPLIYVKLYFYQIC 176
+SL + F +E + LV+E + + +VI+ H +MS YQ+
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS---------YLLYQML 136
Query: 177 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAP 236
+ ++H+ G+ HRD+KP N++V LK+ DFG A+ Y+ +RYYRAP
Sbjct: 137 CGIKHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 296
E+I G Y +DIWS GC++ E++ + LFPG +DQ ++I+ LGTP E +K +
Sbjct: 195 EVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 253
Query: 297 P---NYTEFKFPQIKAHPWHKIFQKRMPP-----------EAVDLVSRLLQYSPNLRSTA 342
P NY E + P+ + K+F + P +A DL+S++L P R +
Sbjct: 254 PTVRNYVENR-PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 312
Query: 343 FDAV 346
DA+
Sbjct: 313 DDAL 316
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 154/304 (50%), Gaps = 37/304 (12%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 120
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 121 VSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIK---HHYKMSQRMPLIYVKLYFYQIC 176
+SL + F +E + LV+E + + +VI+ H +MS YQ+
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS---------YLLYQML 136
Query: 177 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAP 236
+ ++H+ G+ HRD+KP N++V LK+ DFG A+ Y+ +RYYRAP
Sbjct: 137 CGIKHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 296
E+I G Y +DIWS GC++ E++ + LFPG +DQ ++I+ LGTP E +K +
Sbjct: 195 EVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 253
Query: 297 P---NYTEFKFPQIKAHPWHKIFQKRMPP-----------EAVDLVSRLLQYSPNLRSTA 342
P NY E + P+ + K+F + P +A DL+S++L P R +
Sbjct: 254 PTVRNYVENR-PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 312
Query: 343 FDAV 346
DA+
Sbjct: 313 DDAL 316
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 154/304 (50%), Gaps = 37/304 (12%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 120
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 25 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 84
Query: 121 VSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIK---HHYKMSQRMPLIYVKLYFYQIC 176
+SL + F +E + LV+E + + +VI+ H +MS YQ+
Sbjct: 85 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS---------YLLYQML 135
Query: 177 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAP 236
+ ++H+ G+ HRD+KP N++V LK+ DFG A+ Y+ +RYYRAP
Sbjct: 136 CGIKHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAP 193
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 296
E+I G Y +DIWS GC++ E++ + LFPG +DQ ++I+ LGTP E +K +
Sbjct: 194 EVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 252
Query: 297 P---NYTEFKFPQIKAHPWHKIFQKRMPP-----------EAVDLVSRLLQYSPNLRSTA 342
P NY E + P+ + K+F + P +A DL+S++L P R +
Sbjct: 253 PTVRNYVENR-PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 311
Query: 343 FDAV 346
DA+
Sbjct: 312 DDAL 315
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 155/304 (50%), Gaps = 37/304 (12%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 120
Y + +G G+ G+V A VAIKK+ Q++ + R EL M++++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 121 VSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIK---HHYKMSQRMPLIYVKLYFYQIC 176
+ L + F +E + +V+E + + +VI+ H +MS YQ+
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS---------YLLYQML 136
Query: 177 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAP 236
+ ++H+ G+ HRD+KP N++V LK+ DFG A+ Y+ +RYYRAP
Sbjct: 137 VGIKHLHSA-GIIHRDLKPSNIVVKSDA-TLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 296
E+I G Y +DIWS GC++ E++ G LFPG +DQ ++I+ LGTP+ E +K +
Sbjct: 195 EVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQ 253
Query: 297 P---NYTEFKFPQIKAHPWHKIFQKRMPP-----------EAVDLVSRLLQYSPNLRSTA 342
P Y E + P+ + + K+F + P +A DL+S++L + R +
Sbjct: 254 PTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV 312
Query: 343 FDAV 346
+A+
Sbjct: 313 DEAL 316
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 154/304 (50%), Gaps = 37/304 (12%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 120
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 121 VSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIK---HHYKMSQRMPLIYVKLYFYQIC 176
+SL + F +E + LV+E + + +VI+ H +MS YQ+
Sbjct: 80 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS---------YLLYQML 130
Query: 177 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAP 236
+ ++H+ G+ HRD+KP N++V LK+ DFG A+ Y+ +RYYRAP
Sbjct: 131 CGIKHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAP 188
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 296
E+I G Y +DIWS GC++ E++ + LFPG +DQ ++I+ LGTP E +K +
Sbjct: 189 EVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 247
Query: 297 P---NYTEFKFPQIKAHPWHKIFQKRMPP-----------EAVDLVSRLLQYSPNLRSTA 342
P NY E + P+ + K+F + P +A DL+S++L P R +
Sbjct: 248 PTVRNYVENR-PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 306
Query: 343 FDAV 346
DA+
Sbjct: 307 DDAL 310
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 154/304 (50%), Gaps = 37/304 (12%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 120
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 78
Query: 121 VSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIK---HHYKMSQRMPLIYVKLYFYQIC 176
+SL + F +E + LV+E + + +VI+ H +MS YQ+
Sbjct: 79 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS---------YLLYQML 129
Query: 177 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAP 236
+ ++H+ G+ HRD+KP N++V LK+ DFG A+ Y+ +RYYRAP
Sbjct: 130 CGIKHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAP 187
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 296
E+I G Y +DIWS GC++ E++ + LFPG +DQ ++I+ LGTP E +K +
Sbjct: 188 EVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 246
Query: 297 P---NYTEFKFPQIKAHPWHKIFQKRMPP-----------EAVDLVSRLLQYSPNLRSTA 342
P NY E + P+ + K+F + P +A DL+S++L P R +
Sbjct: 247 PTVRNYVENR-PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 305
Query: 343 FDAV 346
DA+
Sbjct: 306 DDAL 309
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 154/304 (50%), Gaps = 37/304 (12%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 120
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 121 VSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIK---HHYKMSQRMPLIYVKLYFYQIC 176
+SL + F +E + LV+E + + +VI+ H +MS YQ+
Sbjct: 80 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS---------YLLYQML 130
Query: 177 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAP 236
+ ++H+ G+ HRD+KP N++V LK+ DFG A+ Y+ +RYYRAP
Sbjct: 131 CGIKHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAP 188
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 296
E+I G Y +DIWS GC++ E++ + LFPG +DQ ++I+ LGTP E +K +
Sbjct: 189 EVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 247
Query: 297 P---NYTEFKFPQIKAHPWHKIFQKRMPP-----------EAVDLVSRLLQYSPNLRSTA 342
P NY E + P+ + K+F + P +A DL+S++L P R +
Sbjct: 248 PTVRNYVENR-PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 306
Query: 343 FDAV 346
DA+
Sbjct: 307 DDAL 310
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 148/294 (50%), Gaps = 25/294 (8%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-NRELQTMR-LLDHPNVVSL 123
Y R +G G + VF+A + E V +K + K+ K RE++ + L PN+++L
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKREIKILENLRGGPNIITL 97
Query: 124 KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
+ LV E+V T + ++ Q + ++ Y Y+I +AL Y H
Sbjct: 98 ADIVKDPVSRTPA---LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGAT 243
++G+ HRD+KP N++++ +L+L D+G A+ G+ + SRY++ PEL+
Sbjct: 149 -SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 244 EYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTP------TREEIKCMN 296
Y ++D+WS GC+LA ++ +P F G DQLV I KVLGT + I+ ++
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE-LD 266
Query: 297 PNYTEFKFPQIKAHPW----HKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
P + + + W H Q + PEA+D + +LL+Y R TA +A+
Sbjct: 267 PRFNDI-LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 319
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 155/304 (50%), Gaps = 37/304 (12%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 120
Y + +G G+ G+V A VAIKK+ Q++ + R EL M++++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 121 VSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIK---HHYKMSQRMPLIYVKLYFYQIC 176
+ L + F +E + +V+E + + +VI+ H +MS YQ+
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS---------YLLYQML 136
Query: 177 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAP 236
+ ++H+ G+ HRD+KP N++V LK+ DFG A+ Y+ +RYYRAP
Sbjct: 137 CGIKHLHSA-GIIHRDLKPSNIVVKSDA-TLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 296
E+I G Y +DIWS GC++ E++ G LFPG +DQ ++I+ LGTP+ E +K +
Sbjct: 195 EVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQ 253
Query: 297 P---NYTEFKFPQIKAHPWHKIFQKRMPP-----------EAVDLVSRLLQYSPNLRSTA 342
P Y E + P+ + + K+F + P +A DL+S++L + R +
Sbjct: 254 PTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV 312
Query: 343 FDAV 346
+A+
Sbjct: 313 DEAL 316
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 154/304 (50%), Gaps = 37/304 (12%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 120
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 121 VSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIK---HHYKMSQRMPLIYVKLYFYQIC 176
+ L + F +E + +V+E + + +VI+ H +MS YQ+
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS---------YLLYQML 136
Query: 177 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAP 236
+ ++H+ G+ HRD+KP N++V LK+ DFG A+ Y+ +RYYRAP
Sbjct: 137 CGIKHLHSA-GIIHRDLKPSNIVVKSDA-TLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 296
E+I G Y +DIWS GC++ E++ G LFPG +DQ ++I+ LGTP+ E +K +
Sbjct: 195 EVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQ 253
Query: 297 P---NYTEFKFPQIKAHPWHKIFQKRMPP-----------EAVDLVSRLLQYSPNLRSTA 342
P Y E + P+ + + K+F + P +A DL+S++L + R +
Sbjct: 254 PTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV 312
Query: 343 FDAV 346
+A+
Sbjct: 313 DEAL 316
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 124 bits (312), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 154/304 (50%), Gaps = 37/304 (12%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 120
Y + +G G+ G+V A VAIKK+ Q++ + R EL M++++H N+
Sbjct: 26 YQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 121 VSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIK---HHYKMSQRMPLIYVKLYFYQIC 176
+ L + F +E + +V+E + + +VI+ H +MS YQ+
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS---------YLLYQML 136
Query: 177 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAP 236
+ ++H+ G+ HRD+KP N++V LK+ DFG A+ Y+ +RYYRAP
Sbjct: 137 VGIKHLHSA-GIIHRDLKPSNIVVKSDA-TLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 296
E+I G Y +DIWS G ++ E++ G LFPG +DQ ++I+ LGTP+ E +K +
Sbjct: 195 EVILGMG-YKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQ 253
Query: 297 P---NYTEFKFPQIKAHPWHKIFQKRMPP-----------EAVDLVSRLLQYSPNLRSTA 342
P Y E + P+ + + K+F + P +A DL+S++L + R +
Sbjct: 254 PTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV 312
Query: 343 FDAV 346
+A+
Sbjct: 313 DEAL 316
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 124 bits (311), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 154/304 (50%), Gaps = 37/304 (12%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 120
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 121 VSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIK---HHYKMSQRMPLIYVKLYFYQIC 176
+ L + F +E + +V+E + + +VI+ H +MS YQ+
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS---------YLLYQML 136
Query: 177 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAP 236
+ ++H+ G+ HRD+KP N++V LK+ DFG A+ Y+ +RYYRAP
Sbjct: 137 CGIKHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 296
E+I G Y +DIWS GC++ E++ G LFPG +DQ ++I+ LGTP+ E +K +
Sbjct: 195 EVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQ 253
Query: 297 P---NYTEFKFPQIKAHPWHKIFQKRMPP-----------EAVDLVSRLLQYSPNLRSTA 342
P Y E + P+ + + K+F + P +A DL+S++L + R +
Sbjct: 254 PTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV 312
Query: 343 FDAV 346
+A+
Sbjct: 313 DEAL 316
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 124 bits (310), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 154/301 (51%), Gaps = 31/301 (10%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 120
Y + +G G+ G+V A G VA+KK+ Q++ + R EL ++ ++H N+
Sbjct: 24 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI 83
Query: 121 VSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRAL 179
+SL + F +E + LV+E + + +VI H +RM + YQ+ +
Sbjct: 84 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-HMELDHERMSYL-----LYQMLCGI 137
Query: 180 AYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 239
++H+ G+ HRD+KP N++V LK+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 138 KHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTASTNFMMTPYVVTRYYRAPEVI 195
Query: 240 FGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP-- 297
G Y +DIWS GC++ EL+ G +F G +DQ ++I+ LGTP+ E + + P
Sbjct: 196 LGMG-YKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTV 254
Query: 298 -NYTEFKFPQIKAHPWHKIFQKRMPP-----------EAVDLVSRLLQYSPNLRSTAFDA 345
NY E + P + ++F + P +A DL+S++L P+ R + +A
Sbjct: 255 RNYVENR-PAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEA 313
Query: 346 V 346
+
Sbjct: 314 L 314
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 154/304 (50%), Gaps = 37/304 (12%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 120
Y + +G G+ G+V A VAIKK+ Q++ + R EL M++++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 121 VSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIK---HHYKMSQRMPLIYVKLYFYQIC 176
+ L + F +E + +V+E + + +VI+ H +MS YQ+
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS---------YLLYQML 136
Query: 177 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAP 236
+ ++H+ G+ HRD+KP N++V LK+ DFG A+ Y+ +RYYRAP
Sbjct: 137 VGIKHLHSA-GIIHRDLKPSNIVVKSDA-TLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 296
E+I G Y +DIWS G ++ E++ G LFPG +DQ ++I+ LGTP+ E +K +
Sbjct: 195 EVILGMG-YKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQ 253
Query: 297 P---NYTEFKFPQIKAHPWHKIFQKRMPP-----------EAVDLVSRLLQYSPNLRSTA 342
P Y E + P+ + + K+F + P +A DL+S++L + R +
Sbjct: 254 PTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV 312
Query: 343 FDAV 346
+A+
Sbjct: 313 DEAL 316
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 154/304 (50%), Gaps = 37/304 (12%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 120
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 121 VSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIK---HHYKMSQRMPLIYVKLYFYQIC 176
+ L + F +E + +V+E + + +VI+ H +MS YQ+
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS---------YLLYQML 136
Query: 177 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAP 236
+ ++H+ G+ HRD+KP N++V LK+ DFG A+ Y+ +RYYRAP
Sbjct: 137 CGIKHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 296
E+I G Y +DIWS GC++ E++ G LFPG +DQ ++I+ LGTP+ E +K +
Sbjct: 195 EVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQ 253
Query: 297 P---NYTEFKFPQIKAHPWHKIFQKRMPP-----------EAVDLVSRLLQYSPNLRSTA 342
P Y E + P+ + + K+F + P +A DL+S++L + R +
Sbjct: 254 PTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV 312
Query: 343 FDAV 346
+A+
Sbjct: 313 DEAL 316
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 154/304 (50%), Gaps = 37/304 (12%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 120
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 28 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 87
Query: 121 VSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIK---HHYKMSQRMPLIYVKLYFYQIC 176
+ L + F +E + +V+E + + +VI+ H +MS YQ+
Sbjct: 88 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS---------YLLYQML 138
Query: 177 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAP 236
+ ++H+ G+ HRD+KP N++V LK+ DFG A+ + ++ +RYYRAP
Sbjct: 139 CGIKHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMVPFVVTRYYRAP 196
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 296
E+I G Y +DIWS GC++ E++ G LFPG +DQ ++I+ LGTP E +K +
Sbjct: 197 EVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ 255
Query: 297 P---NYTEFKFPQIKAHPWHKIFQKRMPP-----------EAVDLVSRLLQYSPNLRSTA 342
P Y E + P+ + + K+F + P +A DL+S++L + R +
Sbjct: 256 PTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV 314
Query: 343 FDAV 346
+A+
Sbjct: 315 DEAL 318
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 153/304 (50%), Gaps = 37/304 (12%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 120
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 121 VSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIK---HHYKMSQRMPLIYVKLYFYQIC 176
+ L + F +E + +V+E + + +VI+ H +MS YQ+
Sbjct: 87 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS---------YLLYQML 137
Query: 177 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAP 236
+ ++H+ G+ HRD+KP N++V LK+ DFG A+ Y+ +RYYRAP
Sbjct: 138 CGIKHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAP 195
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 296
E+I G Y +DIWS GC++ E++ G LFPG +DQ ++I+ LGTP E +K +
Sbjct: 196 EVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ 254
Query: 297 P---NYTEFKFPQIKAHPWHKIFQKRMPP-----------EAVDLVSRLLQYSPNLRSTA 342
P Y E + P+ + + K+F + P +A DL+S++L + R +
Sbjct: 255 PTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV 313
Query: 343 FDAV 346
+A+
Sbjct: 314 DEAL 317
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 153/304 (50%), Gaps = 37/304 (12%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 120
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 121 VSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIK---HHYKMSQRMPLIYVKLYFYQIC 176
+ L + F +E + +V+E + + +VI+ H +MS YQ+
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS---------YLLYQML 136
Query: 177 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAP 236
+ ++H+ G+ HRD+KP N++V LK+ DFG A+ Y+ +RYYRAP
Sbjct: 137 CGIKHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 296
E+I G Y +DIWS GC++ E++ G LFPG +DQ ++I+ LGTP E +K +
Sbjct: 195 EVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ 253
Query: 297 P---NYTEFKFPQIKAHPWHKIFQKRMPP-----------EAVDLVSRLLQYSPNLRSTA 342
P Y E + P+ + + K+F + P +A DL+S++L + R +
Sbjct: 254 PTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV 312
Query: 343 FDAV 346
+A+
Sbjct: 313 DEAL 316
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 120 bits (302), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 142/260 (54%), Gaps = 20/260 (7%)
Query: 61 PKQTISYMAE--RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLDH- 117
P ++Y E +V+G GSFG V +A + + VA+K V +KR+ + + +R+L+H
Sbjct: 91 PHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHL 150
Query: 118 -----PNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYF 172
N +++ H + T ++ ++ + E + ++ +IK + +PL V+ +
Sbjct: 151 RKQDKDNTMNVIHMLENFTFRN--HICMTFELLSMNLYELIKKNKFQGFSLPL--VRKFA 206
Query: 173 YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ-LKLCDFGSAKVLVKGEPNISYICSR 231
+ I + L +H + H D+KP+N+L+ +K+ DFGS+ + + + I SR
Sbjct: 207 HSILQCLDALHKN-RIIHCDLKPENILLKQQGRSGIKVIDFGSS--CYEHQRVYTXIQSR 263
Query: 232 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE 291
+YRAPE+I GA Y ID+WS GC+LAELL G PL PGE DQL +I++LG P++
Sbjct: 264 FYRAPEVILGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQ-- 320
Query: 292 IKCMNPNYTEFKFPQIKAHP 311
K ++ + F K +P
Sbjct: 321 -KLLDASKRAKNFVSXKGYP 339
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 142/260 (54%), Gaps = 20/260 (7%)
Query: 61 PKQTISYMAE--RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLDH- 117
P ++Y E +V+G GSFG V +A + + VA+K V +KR+ + + +R+L+H
Sbjct: 91 PHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHL 150
Query: 118 -----PNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYF 172
N +++ H + T ++ ++ + E + ++ +IK + +PL V+ +
Sbjct: 151 RKQDKDNTMNVIHMLENFTFRN--HICMTFELLSMNLYELIKKNKFQGFSLPL--VRKFA 206
Query: 173 YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ-LKLCDFGSAKVLVKGEPNISYICSR 231
+ I + L +H + H D+KP+N+L+ +K+ DFGS+ + + + I SR
Sbjct: 207 HSILQCLDALHKN-RIIHCDLKPENILLKQQGRSGIKVIDFGSS--CYEHQRVYTXIQSR 263
Query: 232 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE 291
+YRAPE+I GA Y ID+WS GC+LAELL G PL PGE DQL +I++LG P++
Sbjct: 264 FYRAPEVILGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQ-- 320
Query: 292 IKCMNPNYTEFKFPQIKAHP 311
K ++ + F K +P
Sbjct: 321 -KLLDASKRAKNFVSXKGYP 339
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 148/296 (50%), Gaps = 29/296 (9%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRE----LQTMRLLDHPNVV 121
Y R +G G + VF+A + E VA+K + K+ K + L+ +R PN++
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKKKKIKREIKILENLR--GGPNII 95
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAY 181
+L + LV E+V T + ++ Q + ++ Y Y+I +AL Y
Sbjct: 96 TLADIVKDPVSRTPA---LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDY 146
Query: 182 IHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 241
H ++G+ HRD+KP N+L++ +L+L D+G A+ G+ + SRY++ PEL+
Sbjct: 147 CH-SMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 205
Query: 242 ATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTP------TREEIKC 294
Y ++D+WS GC+LA ++ +P F G DQLV I KVLGT + I+
Sbjct: 206 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE- 264
Query: 295 MNPNYTEFKFPQIKAHPW----HKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
++P + + + W H Q + PEA+D + +LL+Y R TA +A+
Sbjct: 265 LDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 319
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 146/304 (48%), Gaps = 33/304 (10%)
Query: 60 QPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQT--MRLLDH 117
Q + Y R VG G + VF+ + E IK + K+ K + L+
Sbjct: 26 QWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLMGG 85
Query: 118 PNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICR 177
PN+V L K +L+ EYV T +V + + ++ Y Y++ +
Sbjct: 86 PNIVKLLDIVRDQHSKTP---SLIFEYVNNTDFKV------LYPTLTDYDIRYYIYELLK 136
Query: 178 ALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPE 237
AL Y H+ G+ HRD+KP N++++ +L+L D+G A+ G+ + SRY++ PE
Sbjct: 137 ALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 195
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 296
L+ +Y ++D+WS GC+ A ++ +P F G DQLV+I KVLGT +N
Sbjct: 196 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT------DGLN 249
Query: 297 PNYTEFKF---PQIKA-------HPWHKIF----QKRMPPEAVDLVSRLLQYSPNLRSTA 342
+++ PQ++A PW K Q + PEA+D + +LL+Y R TA
Sbjct: 250 VYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 309
Query: 343 FDAV 346
+A+
Sbjct: 310 LEAM 313
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 153/301 (50%), Gaps = 31/301 (10%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 120
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 121 VSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRAL 179
+ L + F +E + +V+E + + +VI+ +RM + YQ+ +
Sbjct: 80 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD-HERMSYL-----LYQMLCGI 133
Query: 180 AYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 239
++H+ G+ HRD+KP N++V LK+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 134 KHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 191
Query: 240 FGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP-- 297
G Y +D+WS GC++ E++ + LFPG +DQ ++I+ LGTP E +K + P
Sbjct: 192 LGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 250
Query: 298 -NYTEFKFPQIKAHPWHKIFQKRMPP-----------EAVDLVSRLLQYSPNLRSTAFDA 345
Y E + P+ + + K+F + P +A DL+S++L + R + +A
Sbjct: 251 RTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 309
Query: 346 V 346
+
Sbjct: 310 L 310
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 153/304 (50%), Gaps = 37/304 (12%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 120
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 31 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 90
Query: 121 VSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIK---HHYKMSQRMPLIYVKLYFYQIC 176
+ L + F +E + +V+E + + +VI+ H +MS YQ+
Sbjct: 91 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS---------YLLYQML 141
Query: 177 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAP 236
+ ++H+ G+ HRD+KP N++V LK+ DFG A+ Y+ +RYYRAP
Sbjct: 142 CGIKHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAP 199
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 296
E+I G Y +D+WS GC++ E++ + LFPG +DQ ++I+ LGTP E +K +
Sbjct: 200 EVILGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 258
Query: 297 P---NYTEFKFPQIKAHPWHKIFQKRMPP-----------EAVDLVSRLLQYSPNLRSTA 342
P Y E + P+ + + K+F + P +A DL+S++L + R +
Sbjct: 259 PTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV 317
Query: 343 FDAV 346
+A+
Sbjct: 318 DEAL 321
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 145/304 (47%), Gaps = 33/304 (10%)
Query: 60 QPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQT--MRLLDH 117
Q + Y R VG G + VF+ + E IK + K+ K + L
Sbjct: 47 QWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGG 106
Query: 118 PNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICR 177
PN+V L K +L+ EYV T +V + + ++ Y Y++ +
Sbjct: 107 PNIVKLLDIVRDQHSKTP---SLIFEYVNNTDFKV------LYPTLTDYDIRYYIYELLK 157
Query: 178 ALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPE 237
AL Y H+ G+ HRD+KP N++++ +L+L D+G A+ G+ + SRY++ PE
Sbjct: 158 ALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 216
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 296
L+ +Y ++D+WS GC+ A ++ +P F G DQLV+I KVLGT +N
Sbjct: 217 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT------DGLN 270
Query: 297 PNYTEFKF---PQIKA-------HPWHKIF----QKRMPPEAVDLVSRLLQYSPNLRSTA 342
+++ PQ++A PW K Q + PEA+D + +LL+Y R TA
Sbjct: 271 AYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 330
Query: 343 FDAV 346
+A+
Sbjct: 331 LEAM 334
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 152/304 (50%), Gaps = 37/304 (12%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 120
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 121 VSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIK---HHYKMSQRMPLIYVKLYFYQIC 176
+ L + F +E + +V+E + + +VI+ H +MS YQ+
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS---------YLLYQML 136
Query: 177 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAP 236
+ ++H+ G+ HRD+KP N++V LK+ DFG A+ + +RYYRAP
Sbjct: 137 CGIKHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPEVVTRYYRAP 194
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 296
E+I G Y +DIWS GC++ E++ G LFPG +DQ ++I+ LGTP E +K +
Sbjct: 195 EVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ 253
Query: 297 P---NYTEFKFPQIKAHPWHKIFQKRMPP-----------EAVDLVSRLLQYSPNLRSTA 342
P Y E + P+ + + K+F + P +A DL+S++L + R +
Sbjct: 254 PTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRISV 312
Query: 343 FDAV 346
+A+
Sbjct: 313 DEAL 316
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 164/347 (47%), Gaps = 77/347 (22%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKV------LQDKRYKNRELQTMRLLDHPN 119
+Y+ + ++G GS+G V+ A T + VAIKKV L D + RE+ + L
Sbjct: 27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 86
Query: 120 VVSLKHCFF--STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICR 177
++ L + DELY+ VLE + ++ K +++ ++K Y +
Sbjct: 87 IIRLYDLIIPDDLLKFDELYI--VLEIADSDLKKLFKTPIFLTEE----HIKTILYNLLL 140
Query: 178 ALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL-VKGEPNI----------- 225
+IH + G+ HRD+KP N L+N +K+CDFG A+ + + + NI
Sbjct: 141 GENFIHES-GIIHRDLKPANCLLNQDC-SVKVCDFGLARTINSEKDTNIVNDLEENEEPG 198
Query: 226 -----------SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQ-------- 265
S++ +R+YRAPELI YT +IDIWS GC+ AELL + Q
Sbjct: 199 PHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTN 258
Query: 266 --PLFPG-----------------ESGVDQLVEIIKVLGTPTREEIKCMN-PNYTEFKFP 305
PLFPG +S DQL I ++GTPT +++K +N P ++
Sbjct: 259 RFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKY--- 315
Query: 306 QIKAHPWHK-IFQKRMPP----EAVDLVSRLLQYSPNLRSTAFDAVG 347
IK P K I K+ P + ++L+ +L+++PN R T A+
Sbjct: 316 -IKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALD 361
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 140/287 (48%), Gaps = 24/287 (8%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN----------RELQTMRLLD---HPN 119
+G G++G V++A+ +G VA+K V R N RE+ +R L+ HPN
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSV----RVPNGEEGLPISTVREVALLRRLEAFEHPN 67
Query: 120 VVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRAL 179
VV L ++ E+ + LV E+V + + + +P +K Q R L
Sbjct: 68 VVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDK--APPPGLPAETIKDLMRQFLRGL 125
Query: 180 AYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 239
++H + HRD+KP+N+LV +KL DFG A++ + + +YRAPE++
Sbjct: 126 DFLHANC-IVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVL 183
Query: 240 FGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY 299
+T Y +D+WS GC+ AE+ +PLF G S DQL +I ++G P ++ + +
Sbjct: 184 LQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP-RDVSL 241
Query: 300 TEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
FP P + + M L+ +L ++P+ R +AF A+
Sbjct: 242 PRGAFPPRGPRPVQSVVPE-MEESGAQLLLEMLTFNPHKRISAFRAL 287
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 140/287 (48%), Gaps = 24/287 (8%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN----------RELQTMRLLD---HPN 119
+G G++G V++A+ +G VA+K V R N RE+ +R L+ HPN
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSV----RVPNGEEGLPISTVREVALLRRLEAFEHPN 67
Query: 120 VVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRAL 179
VV L ++ E+ + LV E+V + + + +P +K Q R L
Sbjct: 68 VVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDK--APPPGLPAETIKDLMRQFLRGL 125
Query: 180 AYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 239
++H + HRD+KP+N+LV +KL DFG A++ + + +YRAPE++
Sbjct: 126 DFLHANC-IVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVL 183
Query: 240 FGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY 299
+T Y +D+WS GC+ AE+ +PLF G S DQL +I ++G P ++ + +
Sbjct: 184 LQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP-RDVSL 241
Query: 300 TEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
FP P + + M L+ +L ++P+ R +AF A+
Sbjct: 242 PRGAFPPRGPRPVQSVVPE-MEESGAQLLLEMLTFNPHKRISAFRAL 287
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 145/304 (47%), Gaps = 33/304 (10%)
Query: 60 QPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQT--MRLLDH 117
Q + Y R VG G + VF+ + E IK + K+ K + L
Sbjct: 27 QWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGG 86
Query: 118 PNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICR 177
PN+V L K +L+ EYV T +V + + ++ Y Y++ +
Sbjct: 87 PNIVKLLDIVRDQHSKTP---SLIFEYVNNTDFKV------LYPTLTDYDIRYYIYELLK 137
Query: 178 ALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPE 237
AL Y H+ G+ HRD+KP N++++ +L+L D+G A+ G+ + SRY++ PE
Sbjct: 138 ALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 196
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 296
L+ +Y ++D+WS GC+ A ++ +P F G DQLV+I KVLGT +N
Sbjct: 197 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT------DGLN 250
Query: 297 PNYTEFKF---PQIKA-------HPWHKIF----QKRMPPEAVDLVSRLLQYSPNLRSTA 342
+++ PQ++A PW K Q + PEA+D + +LL+Y R TA
Sbjct: 251 VYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 310
Query: 343 FDAV 346
+A+
Sbjct: 311 LEAM 314
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 145/304 (47%), Gaps = 33/304 (10%)
Query: 60 QPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQT--MRLLDH 117
Q + Y R VG G + VF+ + E IK + K+ K + L
Sbjct: 26 QWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGG 85
Query: 118 PNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICR 177
PN+V L K +L+ EYV T +V + + ++ Y Y++ +
Sbjct: 86 PNIVKLLDIVRDQHSKTP---SLIFEYVNNTDFKV------LYPTLTDYDIRYYIYELLK 136
Query: 178 ALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPE 237
AL Y H+ G+ HRD+KP N++++ +L+L D+G A+ G+ + SRY++ PE
Sbjct: 137 ALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 195
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 296
L+ +Y ++D+WS GC+ A ++ +P F G DQLV+I KVLGT +N
Sbjct: 196 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT------DGLN 249
Query: 297 PNYTEFKF---PQIKA-------HPWHKIF----QKRMPPEAVDLVSRLLQYSPNLRSTA 342
+++ PQ++A PW K Q + PEA+D + +LL+Y R TA
Sbjct: 250 VYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 309
Query: 343 FDAV 346
+A+
Sbjct: 310 LEAM 313
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 145/304 (47%), Gaps = 33/304 (10%)
Query: 60 QPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQT--MRLLDH 117
Q + Y R VG G + VF+ + E IK + K+ K + L
Sbjct: 26 QWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGG 85
Query: 118 PNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICR 177
PN+V L K +L+ EYV T +V + + ++ Y Y++ +
Sbjct: 86 PNIVKLLDIVRDQHSKTP---SLIFEYVNNTDFKV------LYPTLTDYDIRYYIYELLK 136
Query: 178 ALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPE 237
AL Y H+ G+ HRD+KP N++++ +L+L D+G A+ G+ + SRY++ PE
Sbjct: 137 ALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 195
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 296
L+ +Y ++D+WS GC+ A ++ +P F G DQLV+I KVLGT +N
Sbjct: 196 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT------DGLN 249
Query: 297 PNYTEFKF---PQIKA-------HPWHKIF----QKRMPPEAVDLVSRLLQYSPNLRSTA 342
+++ PQ++A PW K Q + PEA+D + +LL+Y R TA
Sbjct: 250 VYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 309
Query: 343 FDAV 346
+A+
Sbjct: 310 LEAM 313
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 145/304 (47%), Gaps = 33/304 (10%)
Query: 60 QPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQT--MRLLDH 117
Q + Y R VG G + VF+ + E IK + K+ K + L
Sbjct: 26 QWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGG 85
Query: 118 PNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICR 177
PN+V L K +L+ EYV T +V + + ++ Y Y++ +
Sbjct: 86 PNIVKLLDIVRDQHSKTP---SLIFEYVNNTDFKV------LYPTLTDYDIRYYIYELLK 136
Query: 178 ALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPE 237
AL Y H+ G+ HRD+KP N++++ +L+L D+G A+ G+ + SRY++ PE
Sbjct: 137 ALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 195
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 296
L+ +Y ++D+WS GC+ A ++ +P F G DQLV+I KVLGT +N
Sbjct: 196 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT------DGLN 249
Query: 297 PNYTEFKF---PQIKA-------HPWHKIF----QKRMPPEAVDLVSRLLQYSPNLRSTA 342
+++ PQ++A PW K Q + PEA+D + +LL+Y R TA
Sbjct: 250 VYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 309
Query: 343 FDAV 346
+A+
Sbjct: 310 LEAM 313
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 145/304 (47%), Gaps = 33/304 (10%)
Query: 60 QPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQT--MRLLDH 117
Q + Y R VG G + VF+ + E IK + K+ K + L
Sbjct: 28 QWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGG 87
Query: 118 PNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICR 177
PN+V L K +L+ EYV T +V + + ++ Y Y++ +
Sbjct: 88 PNIVKLLDIVRDQHSKTP---SLIFEYVNNTDFKV------LYPTLTDYDIRYYIYELLK 138
Query: 178 ALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPE 237
AL Y H+ G+ HRD+KP N++++ +L+L D+G A+ G+ + SRY++ PE
Sbjct: 139 ALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 197
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 296
L+ +Y ++D+WS GC+ A ++ +P F G DQLV+I KVLGT +N
Sbjct: 198 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG------LN 251
Query: 297 PNYTEFKF---PQIKA-------HPWHKIF----QKRMPPEAVDLVSRLLQYSPNLRSTA 342
+++ PQ++A PW K Q + PEA+D + +LL+Y R TA
Sbjct: 252 VYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 311
Query: 343 FDAV 346
+A+
Sbjct: 312 LEAM 315
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 139/260 (53%), Gaps = 20/260 (7%)
Query: 61 PKQTISYMAE--RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLDH- 117
P ++Y E +V+G G FG V +A + + VA+K V +KR+ + + +R+L+H
Sbjct: 91 PHDHVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHL 150
Query: 118 -----PNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYF 172
N +++ H + T ++ ++ + E + ++ +IK + +PL V+ +
Sbjct: 151 RKQDKDNTMNVIHMLENFTFRN--HICMTFELLSMNLYELIKKNKFQGFSLPL--VRKFA 206
Query: 173 YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ-LKLCDFGSAKVLVKGEPNISYICSR 231
+ I + L +H + H D+KP+N+L+ +K+ DFGS+ + + I SR
Sbjct: 207 HSILQCLDALHKN-RIIHCDLKPENILLKQQGRSGIKVIDFGSS--CYEHQRVYXXIQSR 263
Query: 232 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE 291
+YRAPE+I GA Y ID+WS GC+LAELL G PL PGE DQL +I++LG P +
Sbjct: 264 FYRAPEVILGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQ-- 320
Query: 292 IKCMNPNYTEFKFPQIKAHP 311
K ++ + F K +P
Sbjct: 321 -KLLDASKRAKNFVSXKGYP 339
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 140/287 (48%), Gaps = 24/287 (8%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN----------RELQTMRLLD---HPN 119
+G G++G V++A+ +G VA+K V R N RE+ +R L+ HPN
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSV----RVPNGEEGLPISTVREVALLRRLEAFEHPN 67
Query: 120 VVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRAL 179
VV L ++ E+ + LV E+V + + + +P +K Q R L
Sbjct: 68 VVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDK--APPPGLPAETIKDLMRQFLRGL 125
Query: 180 AYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 239
++H + HRD+KP+N+LV +KL DFG A++ + + +YRAPE++
Sbjct: 126 DFLHANC-IVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVL 183
Query: 240 FGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY 299
+T Y +D+WS GC+ AE+ +PLF G S DQL +I ++G P ++ + +
Sbjct: 184 LQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP-RDVSL 241
Query: 300 TEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
FP P + + M L+ +L ++P+ R +AF A+
Sbjct: 242 PRGAFPPRGPRPVQSVVPE-MEESGAQLLLEMLTFNPHKRISAFRAL 287
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 145/304 (47%), Gaps = 33/304 (10%)
Query: 60 QPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQT--MRLLDH 117
Q + Y R VG G + VF+ + E IK + K+ K + L
Sbjct: 27 QWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGG 86
Query: 118 PNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICR 177
PN+V L K +L+ EYV T +V + + ++ Y Y++ +
Sbjct: 87 PNIVKLLDIVRDQHSKTP---SLIFEYVNNTDFKV------LYPTLTDYDIRYYIYELLK 137
Query: 178 ALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPE 237
AL Y H+ G+ HRD+KP N++++ +L+L D+G A+ G+ + SRY++ PE
Sbjct: 138 ALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 196
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 296
L+ +Y ++D+WS GC+ A ++ +P F G DQLV+I KVLGT +N
Sbjct: 197 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG------LN 250
Query: 297 PNYTEFKF---PQIKA-------HPWHKIF----QKRMPPEAVDLVSRLLQYSPNLRSTA 342
+++ PQ++A PW K Q + PEA+D + +LL+Y R TA
Sbjct: 251 VYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 310
Query: 343 FDAV 346
+A+
Sbjct: 311 LEAM 314
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 145/304 (47%), Gaps = 33/304 (10%)
Query: 60 QPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQT--MRLLDH 117
Q + Y R VG G + VF+ + E IK + K+ K + L
Sbjct: 26 QWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGG 85
Query: 118 PNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICR 177
PN+V L K +L+ EYV T +V + + ++ Y Y++ +
Sbjct: 86 PNIVKLLDIVRDQHSKTP---SLIFEYVNNTDFKV------LYPTLTDYDIRYYIYELLK 136
Query: 178 ALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPE 237
AL Y H+ G+ HRD+KP N++++ +L+L D+G A+ G+ + SRY++ PE
Sbjct: 137 ALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 195
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 296
L+ +Y ++D+WS GC+ A ++ +P F G DQLV+I KVLGT +N
Sbjct: 196 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG------LN 249
Query: 297 PNYTEFKF---PQIKA-------HPWHKIF----QKRMPPEAVDLVSRLLQYSPNLRSTA 342
+++ PQ++A PW K Q + PEA+D + +LL+Y R TA
Sbjct: 250 VYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 309
Query: 343 FDAV 346
+A+
Sbjct: 310 LEAM 313
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 145/304 (47%), Gaps = 33/304 (10%)
Query: 60 QPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQT--MRLLDH 117
Q + Y R VG G + VF+ + E IK + K+ K + L
Sbjct: 26 QWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGG 85
Query: 118 PNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICR 177
PN+V L K +L+ EYV T +V + + ++ Y Y++ +
Sbjct: 86 PNIVKLLDIVRDQHSKTP---SLIFEYVNNTDFKV------LYPTLTDYDIRYYIYELLK 136
Query: 178 ALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPE 237
AL Y H+ G+ HRD+KP N++++ +L+L D+G A+ G+ + SRY++ PE
Sbjct: 137 ALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 195
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 296
L+ +Y ++D+WS GC+ A ++ +P F G DQLV+I KVLGT +N
Sbjct: 196 LLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG------LN 249
Query: 297 PNYTEFKF---PQIKA-------HPWHKIF----QKRMPPEAVDLVSRLLQYSPNLRSTA 342
+++ PQ++A PW K Q + PEA+D + +LL+Y R TA
Sbjct: 250 VYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 309
Query: 343 FDAV 346
+A+
Sbjct: 310 LEAM 313
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 130/242 (53%), Gaps = 22/242 (9%)
Query: 57 KNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLD 116
KNG+ K Y + ++G GSFG V +A E VAIK + K + N+ +RLL+
Sbjct: 47 KNGE-KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLE 105
Query: 117 HPN---------VVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIY 167
N +V LK F +L LV E + ++ ++++ + + L
Sbjct: 106 LMNKHDTEMKYYIVHLKRHFMFRN-----HLCLVFEMLSYNLYDLLRN--TNFRGVSLNL 158
Query: 168 VKLYFYQICRALAYIHN-TIGVCHRDIKPQN-LLVNPHTHQLKLCDFGSAKVLVKGEPNI 225
+ + Q+C AL ++ + + H D+KP+N LL NP +K+ DFGS+ L G+
Sbjct: 159 TRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIY 216
Query: 226 SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLG 285
I SR+YR+PE++ G Y AID+WS GC+L E+ G+PLF G + VDQ+ +I++VLG
Sbjct: 217 QXIQSRFYRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLG 275
Query: 286 TP 287
P
Sbjct: 276 IP 277
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 140/290 (48%), Gaps = 27/290 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN-------------RELQTMRLLD--- 116
+G G++G V++A+ +G VA+K V R N RE+ +R L+
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSV----RVPNGGGGGGGLPISTVREVALLRRLEAFE 72
Query: 117 HPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQIC 176
HPNVV L ++ E+ + LV E+V + + + +P +K Q
Sbjct: 73 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDK--APPPGLPAETIKDLMRQFL 130
Query: 177 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAP 236
R L ++H + HRD+KP+N+LV +KL DFG A++ + + +YRAP
Sbjct: 131 RGLDFLHANC-IVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALTPVVVTLWYRAP 188
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 296
E++ +T Y +D+WS GC+ AE+ +PLF G S DQL +I ++G P ++ +
Sbjct: 189 EVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP-RD 246
Query: 297 PNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
+ FP P + + M L+ +L ++P+ R +AF A+
Sbjct: 247 VSLPRGAFPPRGPRPVQSVVPE-MEESGAQLLLEMLTFNPHKRISAFRAL 295
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 130/242 (53%), Gaps = 22/242 (9%)
Query: 57 KNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLD 116
KNG+ K Y + ++G GSFG V +A E VAIK + K + N+ +RLL+
Sbjct: 47 KNGE-KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLE 105
Query: 117 HPN---------VVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIY 167
N +V LK F +L LV E + ++ ++++ + + L
Sbjct: 106 LMNKHDTEMKYYIVHLKRHFMFRN-----HLCLVFEMLSYNLYDLLRN--TNFRGVSLNL 158
Query: 168 VKLYFYQICRALAYIHN-TIGVCHRDIKPQN-LLVNPHTHQLKLCDFGSAKVLVKGEPNI 225
+ + Q+C AL ++ + + H D+KP+N LL NP +K+ DFGS+ L G+
Sbjct: 159 TRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQL--GQRIY 216
Query: 226 SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLG 285
I SR+YR+PE++ G Y AID+WS GC+L E+ G+PLF G + VDQ+ +I++VLG
Sbjct: 217 QXIQSRFYRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLG 275
Query: 286 TP 287
P
Sbjct: 276 IP 277
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 130/242 (53%), Gaps = 22/242 (9%)
Query: 57 KNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLD 116
KNG+ K Y + ++G GSFG V +A E VAIK + K + N+ +RLL+
Sbjct: 28 KNGE-KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLE 86
Query: 117 HPN---------VVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIY 167
N +V LK F +L LV E + ++ ++++ + + L
Sbjct: 87 LMNKHDTEMKYYIVHLKRHFMFRN-----HLCLVFEMLSYNLYDLLRN--TNFRGVSLNL 139
Query: 168 VKLYFYQICRALAYIHN-TIGVCHRDIKPQN-LLVNPHTHQLKLCDFGSAKVLVKGEPNI 225
+ + Q+C AL ++ + + H D+KP+N LL NP +K+ DFGS+ L G+
Sbjct: 140 TRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIY 197
Query: 226 SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLG 285
I SR+YR+PE++ G Y AID+WS GC+L E+ G+PLF G + VDQ+ +I++VLG
Sbjct: 198 QXIQSRFYRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLG 256
Query: 286 TP 287
P
Sbjct: 257 IP 258
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 152/304 (50%), Gaps = 37/304 (12%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 120
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 121 VSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIK---HHYKMSQRMPLIYVKLYFYQIC 176
+ L + F +E + +V+E + + +VI+ H +MS YQ+
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS---------YLLYQML 136
Query: 177 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAP 236
+ ++H+ G+ HRD+KP N++V LK+ DFG A+ + +RYYRAP
Sbjct: 137 CGIKHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMEPEVVTRYYRAP 194
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 296
E+I G Y +DIWS GC++ E++ + LFPG +DQ ++I+ LGTP +K +
Sbjct: 195 EVILGMG-YKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQ 253
Query: 297 P---NYTEFKFPQIKAHPWHKIFQKRMPP-----------EAVDLVSRLLQYSPNLRSTA 342
P NY E + P+ + + K+F + P +A DL+S++L + R +
Sbjct: 254 PTVRNYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV 312
Query: 343 FDAV 346
+A+
Sbjct: 313 DEAL 316
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 147/296 (49%), Gaps = 29/296 (9%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRE----LQTMRLLDHPNVV 121
Y R +G G + VF+A + E V +K + K+ K + L+ +R PN++
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNII 95
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAY 181
+L + LV E+V T + ++ Q + ++ Y Y+I +AL Y
Sbjct: 96 TLADIVKDPVSRTPA---LVFEHVNNTDFK------QLRQTLTDYDIRFYMYEILKALDY 146
Query: 182 IHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 241
H ++G+ HRD+KP N++++ +L+L D+G A+ G+ + SRY++ PEL+
Sbjct: 147 CH-SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 205
Query: 242 ATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTP------TREEIKC 294
Y ++D+WS GC+LA ++ +P F G DQLV I KVLGT + I+
Sbjct: 206 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE- 264
Query: 295 MNPNYTEFKFPQIKAHPW----HKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
++P + + + W H Q + PEA+D + +LL+Y R TA +A+
Sbjct: 265 LDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 319
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 147/296 (49%), Gaps = 29/296 (9%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRE----LQTMRLLDHPNVV 121
Y R +G G + VF+A + E V +K + K+ K + L+ +R PN++
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNII 95
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAY 181
+L + LV E+V T + ++ Q + ++ Y Y+I +AL Y
Sbjct: 96 TLADIVKDPVSRTPA---LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDY 146
Query: 182 IHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 241
H ++G+ HRD+KP N++++ +L+L D+G A+ G+ + SRY++ PEL+
Sbjct: 147 CH-SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 205
Query: 242 ATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTP------TREEIKC 294
Y ++D+WS GC+LA ++ +P F G DQLV I KVLGT + I+
Sbjct: 206 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE- 264
Query: 295 MNPNYTEFKFPQIKAHPW----HKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
++P + + + W H Q + PEA+D + +LL+Y R TA +A+
Sbjct: 265 LDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 319
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 147/296 (49%), Gaps = 29/296 (9%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRE----LQTMRLLDHPNVV 121
Y R +G G + VF+A + E V +K + K+ K + L+ +R PN++
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNII 95
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAY 181
+L + LV E+V T + ++ Q + ++ Y Y+I +AL Y
Sbjct: 96 TLADIVKDPVSRTPA---LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDY 146
Query: 182 IHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 241
H ++G+ HRD+KP N++++ +L+L D+G A+ G+ + SRY++ PEL+
Sbjct: 147 CH-SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 205
Query: 242 ATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTP------TREEIKC 294
Y ++D+WS GC+LA ++ +P F G DQLV I KVLGT + I+
Sbjct: 206 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE- 264
Query: 295 MNPNYTEFKFPQIKAHPW----HKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
++P + + + W H Q + PEA+D + +LL+Y R TA +A+
Sbjct: 265 LDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 319
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 147/296 (49%), Gaps = 29/296 (9%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRE----LQTMRLLDHPNVV 121
Y R +G G + VF+A + E V +K + K+ K + L+ +R PN++
Sbjct: 43 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNII 100
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAY 181
+L + LV E+V T + ++ Q + ++ Y Y+I +AL Y
Sbjct: 101 TLADIVKDPVSRTPA---LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDY 151
Query: 182 IHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 241
H ++G+ HRD+KP N++++ +L+L D+G A+ G+ + SRY++ PEL+
Sbjct: 152 CH-SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 210
Query: 242 ATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTP------TREEIKC 294
Y ++D+WS GC+LA ++ +P F G DQLV I KVLGT + I+
Sbjct: 211 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE- 269
Query: 295 MNPNYTEFKFPQIKAHPW----HKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
++P + + + W H Q + PEA+D + +LL+Y R TA +A+
Sbjct: 270 LDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 324
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 147/296 (49%), Gaps = 29/296 (9%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRE----LQTMRLLDHPNVV 121
Y R +G G + VF+A + E V +K + K+ K + L+ +R PN++
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNII 95
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAY 181
+L + LV E+V T + ++ Q + ++ Y Y+I +AL Y
Sbjct: 96 TLADIVKDPVSRTPA---LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDY 146
Query: 182 IHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 241
H ++G+ HRD+KP N++++ +L+L D+G A+ G+ + SRY++ PEL+
Sbjct: 147 CH-SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 205
Query: 242 ATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTP------TREEIKC 294
Y ++D+WS GC+LA ++ +P F G DQLV I KVLGT + I+
Sbjct: 206 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE- 264
Query: 295 MNPNYTEFKFPQIKAHPW----HKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
++P + + + W H Q + PEA+D + +LL+Y R TA +A+
Sbjct: 265 LDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 319
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 147/296 (49%), Gaps = 29/296 (9%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRE----LQTMRLLDHPNVV 121
Y R +G G + VF+A + E V +K + K+ K + L+ +R PN++
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNII 95
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAY 181
+L + LV E+V T + ++ Q + ++ Y Y+I +AL Y
Sbjct: 96 TLADIVKDPVSRTPA---LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDY 146
Query: 182 IHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 241
H ++G+ HRD+KP N++++ +L+L D+G A+ G+ + SRY++ PEL+
Sbjct: 147 CH-SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 205
Query: 242 ATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTP------TREEIKC 294
Y ++D+WS GC+LA ++ +P F G DQLV I KVLGT + I+
Sbjct: 206 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE- 264
Query: 295 MNPNYTEFKFPQIKAHPW----HKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
++P + + + W H Q + PEA+D + +LL+Y R TA +A+
Sbjct: 265 LDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 319
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 147/296 (49%), Gaps = 29/296 (9%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRE----LQTMRLLDHPNVV 121
Y R +G G + VF+A + E V +K + K+ K + L+ +R PN++
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNII 95
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAY 181
+L + LV E+V T + ++ Q + ++ Y Y+I +AL Y
Sbjct: 96 TLADIVKDPVSRTPA---LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDY 146
Query: 182 IHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 241
H ++G+ HRD+KP N++++ +L+L D+G A+ G+ + SRY++ PEL+
Sbjct: 147 CH-SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 205
Query: 242 ATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTP------TREEIKC 294
Y ++D+WS GC+LA ++ +P F G DQLV I KVLGT + I+
Sbjct: 206 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE- 264
Query: 295 MNPNYTEFKFPQIKAHPW----HKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
++P + + + W H Q + PEA+D + +LL+Y R TA +A+
Sbjct: 265 LDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 319
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 147/296 (49%), Gaps = 29/296 (9%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRE----LQTMRLLDHPNVV 121
Y R +G G + VF+A + E V +K + K+ K + L+ +R PN++
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNII 95
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAY 181
+L + LV E+V T + ++ Q + ++ Y Y+I +AL Y
Sbjct: 96 TLADIVKDPVSRTPA---LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDY 146
Query: 182 IHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 241
H ++G+ HRD+KP N++++ +L+L D+G A+ G+ + SRY++ PEL+
Sbjct: 147 CH-SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 205
Query: 242 ATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTP------TREEIKC 294
Y ++D+WS GC+LA ++ +P F G DQLV I KVLGT + I+
Sbjct: 206 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE- 264
Query: 295 MNPNYTEFKFPQIKAHPW----HKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
++P + + + W H Q + PEA+D + +LL+Y R TA +A+
Sbjct: 265 LDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 319
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 147/296 (49%), Gaps = 29/296 (9%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRE----LQTMRLLDHPNVV 121
Y R +G G + VF+A + E V +K + K+ K + L+ +R PN++
Sbjct: 37 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNII 94
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAY 181
+L + LV E+V T + ++ Q + ++ Y Y+I +AL Y
Sbjct: 95 TLADIVKDPVSRTPA---LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDY 145
Query: 182 IHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 241
H ++G+ HRD+KP N++++ +L+L D+G A+ G+ + SRY++ PEL+
Sbjct: 146 CH-SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 204
Query: 242 ATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTP------TREEIKC 294
Y ++D+WS GC+LA ++ +P F G DQLV I KVLGT + I+
Sbjct: 205 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE- 263
Query: 295 MNPNYTEFKFPQIKAHPW----HKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
++P + + + W H Q + PEA+D + +LL+Y R TA +A+
Sbjct: 264 LDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 318
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 147/296 (49%), Gaps = 29/296 (9%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRE----LQTMRLLDHPNVV 121
Y R +G G + VF+A + E V +K + K+ K + L+ +R PN++
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNII 95
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAY 181
+L + LV E+V T + ++ Q + ++ Y Y+I +AL Y
Sbjct: 96 TLADIVKDPVSRTPA---LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDY 146
Query: 182 IHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 241
H ++G+ HRD+KP N++++ +L+L D+G A+ G+ + SRY++ PEL+
Sbjct: 147 CH-SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 205
Query: 242 ATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTP------TREEIKC 294
Y ++D+WS GC+LA ++ +P F G DQLV I KVLGT + I+
Sbjct: 206 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE- 264
Query: 295 MNPNYTEFKFPQIKAHPW----HKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
++P + + + W H Q + PEA+D + +LL+Y R TA +A+
Sbjct: 265 LDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 319
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 147/296 (49%), Gaps = 29/296 (9%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRE----LQTMRLLDHPNVV 121
Y R +G G + VF+A + E V +K + K+ K + L+ +R PN++
Sbjct: 36 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNII 93
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAY 181
+L + LV E+V T + ++ Q + ++ Y Y+I +AL Y
Sbjct: 94 TLADIVKDPVSRTPA---LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDY 144
Query: 182 IHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 241
H ++G+ HRD+KP N++++ +L+L D+G A+ G+ + SRY++ PEL+
Sbjct: 145 CH-SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 203
Query: 242 ATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTP------TREEIKC 294
Y ++D+WS GC+LA ++ +P F G DQLV I KVLGT + I+
Sbjct: 204 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE- 262
Query: 295 MNPNYTEFKFPQIKAHPW----HKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
++P + + + W H Q + PEA+D + +LL+Y R TA +A+
Sbjct: 263 LDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 317
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 147/296 (49%), Gaps = 29/296 (9%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRE----LQTMRLLDHPNVV 121
Y R +G G + VF+A + E V +K + K+ K + L+ +R PN++
Sbjct: 37 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNII 94
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAY 181
+L + LV E+V T + ++ Q + ++ Y Y+I +AL Y
Sbjct: 95 TLADIVKDPVSRTPA---LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDY 145
Query: 182 IHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 241
H ++G+ HRD+KP N++++ +L+L D+G A+ G+ + SRY++ PEL+
Sbjct: 146 CH-SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 204
Query: 242 ATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTP------TREEIKC 294
Y ++D+WS GC+LA ++ +P F G DQLV I KVLGT + I+
Sbjct: 205 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE- 263
Query: 295 MNPNYTEFKFPQIKAHPW----HKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
++P + + + W H Q + PEA+D + +LL+Y R TA +A+
Sbjct: 264 LDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 318
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 152/304 (50%), Gaps = 37/304 (12%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 120
Y + +G G+ G+V A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 121 VSLKHCFFSTTEKDELY-LNLVLEYVPETVHRVIK---HHYKMSQRMPLIYVKLYFYQIC 176
+ L + F +E + +V+E + + +VI+ H +MS YQ+
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS---------YLLYQML 136
Query: 177 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAP 236
+ ++H+ G+ HRD+KP N++V LK+ DFG A+ + +RYYRAP
Sbjct: 137 CGIKHLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMEPEVVTRYYRAP 194
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 296
E+I G Y +D+WS GC++ E++ + LFPG +DQ ++I+ LGTP E +K +
Sbjct: 195 EVILGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 253
Query: 297 P---NYTEFKFPQIKAHPWHKIFQKRMPP-----------EAVDLVSRLLQYSPNLRSTA 342
P Y E + P+ + + K+F + P +A DL+S++L + R +
Sbjct: 254 PTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV 312
Query: 343 FDAV 346
+A+
Sbjct: 313 DEAL 316
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 147/296 (49%), Gaps = 29/296 (9%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRE----LQTMRLLDHPNVV 121
Y R +G G + VF+A + E V +K + K+ K + L+ +R PN++
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNII 95
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAY 181
+L + LV E+V T + ++ Q + ++ Y Y+I +AL Y
Sbjct: 96 TLADIVKDPVSRTPA---LVFEHVNNTDFK------QLYQTLTDYDIRFYMYEILKALDY 146
Query: 182 IHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 241
H ++G+ HRD+KP N++++ +L+L D+G A+ G+ + SRY++ PEL+
Sbjct: 147 CH-SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 205
Query: 242 ATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTP------TREEIKC 294
Y ++D+WS GC+LA ++ +P F G DQLV I KVLGT + I+
Sbjct: 206 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE- 264
Query: 295 MNPNYTEFKFPQIKAHPW----HKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
++P + + + W H Q + PEA+D + +LL+Y R TA +A+
Sbjct: 265 LDPRFNDI-LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 319
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 115/220 (52%), Gaps = 24/220 (10%)
Query: 140 LVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLL 199
LV EY+ T + ++ Q + ++ Y Y++ +AL Y H+ G+ HRD+KP N++
Sbjct: 112 LVFEYINNTDFK------QLYQILTDFDIRFYMYELLKALDYCHSK-GIMHRDVKPHNVM 164
Query: 200 VNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLA 259
++ +L+L D+G A+ + + SRY++ PEL+ Y ++D+WS GC+LA
Sbjct: 165 IDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 224
Query: 260 ELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKC--------MNPNYTEFKFPQIKAH 310
++ +P F G+ DQLV I KVLGT EE+ ++P++ + Q
Sbjct: 225 SMIFRREPFFHGQDNYDQLVRIAKVLGT---EELYGYLKKYHIDLDPHFNDI-LGQHSRK 280
Query: 311 PWHKIFQKR----MPPEAVDLVSRLLQYSPNLRSTAFDAV 346
W + PEA+DL+ +LL+Y R TA +A+
Sbjct: 281 RWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAM 320
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 115/220 (52%), Gaps = 24/220 (10%)
Query: 140 LVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLL 199
LV EY+ T + ++ Q + ++ Y Y++ +AL Y H+ G+ HRD+KP N++
Sbjct: 117 LVFEYINNTDFK------QLYQILTDFDIRFYMYELLKALDYCHSK-GIMHRDVKPHNVM 169
Query: 200 VNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLA 259
++ +L+L D+G A+ + + SRY++ PEL+ Y ++D+WS GC+LA
Sbjct: 170 IDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 229
Query: 260 ELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKC--------MNPNYTEFKFPQIKAH 310
++ +P F G+ DQLV I KVLGT EE+ ++P++ + Q
Sbjct: 230 SMIFRREPFFHGQDNYDQLVRIAKVLGT---EELYGYLKKYHIDLDPHFNDI-LGQHSRK 285
Query: 311 PWHKIFQKR----MPPEAVDLVSRLLQYSPNLRSTAFDAV 346
W + PEA+DL+ +LL+Y R TA +A+
Sbjct: 286 RWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAM 325
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 153/349 (43%), Gaps = 78/349 (22%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKV------LQDKRYKNRELQTMRLLDHPN 119
+Y + ++G GS+G V+ A + VAIKKV L D + RE+ + L
Sbjct: 29 NYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 88
Query: 120 VVSLKHCFF--STTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICR 177
++ L + DELY+ VLE + ++ K ++++ +VK Y +
Sbjct: 89 IIRLHDLIIPEDLLKFDELYI--VLEIADSDLKKLFKTPIFLTEQ----HVKTILYNLLL 142
Query: 178 ALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI------------ 225
+IH + G+ HRD+KP N L+N +K+CDFG A+ + + +I
Sbjct: 143 GEKFIHES-GIIHRDLKPANCLLNQDC-SVKICDFGLART-INSDKDIHIVNDLEEKEEN 199
Query: 226 ---------------SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ----- 265
S++ +R+YRAPELI YT +IDIWS GC+ AELL
Sbjct: 200 EEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHIN 259
Query: 266 ------PLFPG-----------------ESGVDQLVEIIKVLGTPTREEIKCMNPN---- 298
PLFPG +S DQL I V+GTP E++KC+
Sbjct: 260 NPTNRFPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIK 319
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y + FP K + + E +DL+ +L+++ R T A+
Sbjct: 320 YIKL-FPTRDGIDLSKKYSS-ISKEGIDLLESMLRFNAQKRITIDKALS 366
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 113/221 (51%), Gaps = 28/221 (12%)
Query: 107 RELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHY-----KMSQ 161
RE+ +R L HPNV+SL+ F S ++ + L+ +Y + +IK H K
Sbjct: 67 REIALLRELKHPNVISLQKVFLSHADRK---VWLLFDYAEHDLWHIIKFHRASKANKKPV 123
Query: 162 RMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVL 218
++P VK YQI + Y+H V HRD+KP N+LV P ++K+ D G A++
Sbjct: 124 QLPRGMVKSLLYQILDGIHYLHAN-WVLHRDLKPANILVMGEGPERGRVKIADMGFARLF 182
Query: 219 ---VKGEPNIS-YICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF------ 268
+K ++ + + +YRAPEL+ GA YT AIDIW+ GC+ AELL +P+F
Sbjct: 183 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQED 242
Query: 269 ---PGESGVDQLVEIIKVLGTPTR---EEIKCMNPNYTEFK 303
DQL I V+G P E+IK M + T K
Sbjct: 243 IKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMK 283
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 153/345 (44%), Gaps = 79/345 (22%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQ------DKRYKNRELQTMRLLDHPNV 120
Y ++G GS+G V +A VAIKK+L+ D + RE+ + L+H +V
Sbjct: 55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHV 114
Query: 121 VS-LKHCFFSTTEK-DELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRA 178
V L EK DELY+ VLE ++ + +++ +++K Y +
Sbjct: 115 VKVLDIVIPKDVEKFDELYV--VLEIADSDFKKLFRTPVYLTE----LHIKTLLYNLLVG 168
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNIS------------ 226
+ Y+H+ G+ HRD+KP N LVN +K+CDFG A+ + E S
Sbjct: 169 VKYVHSA-GILHRDLKPANCLVNQDC-SVKVCDFGLARTVDYPENGNSQLPISPREDDMN 226
Query: 227 ----------------YICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLL------- 263
++ +R+YRAPELI YT AID+WS GC+ AELL
Sbjct: 227 LVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVA 286
Query: 264 ----GQPLFPGES--------------------GVDQLVEIIKVLGTPTREEIKCMNPNY 299
PLFPG S DQL I +LGTP+ E+I+ +
Sbjct: 287 YHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKED 346
Query: 300 TEFKFPQIKAHPWHKIFQKRMP---PEAVDLVSRLLQYSPNLRST 341
+ ++ +I +R P +A+ L+ R+L ++PN R T
Sbjct: 347 AK-RYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRIT 390
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 146/297 (49%), Gaps = 32/297 (10%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 126
+G G+FG VF+A+ +TG+ VA+KKVL + + RE++ ++LL H NVV+L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 127 FFSTTE-----KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAY 181
+ K +YL V ++ + ++ + + + L +K + L Y
Sbjct: 86 CRTKASPYNRCKGSIYL--VFDFCEHDLAGLLSN---VLVKFTLSEIKRVMQMLLNGLYY 140
Query: 182 IHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLV---KGEPN--ISYICSRYYRAP 236
IH + HRD+K N+L+ LKL DFG A+ +PN + + + +YR P
Sbjct: 141 IHRN-KILHRDMKAANVLIT-RDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 296
EL+ G +Y ID+W AGC++AE+ P+ G + QL I ++ G+ T E ++
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD 258
Query: 297 PNYTEF-KFPQIKAHPWHKIFQKRMP-----PEAVDLVSRLLQYSPNLRSTAFDAVG 347
NY + K +K + + R+ P A+DL+ +LL P R + DA+
Sbjct: 259 -NYELYEKLELVKGQ--KRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 312
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 145/299 (48%), Gaps = 38/299 (12%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 126
+G G+FG VF+A+ +TG+ VA+KKVL + + RE++ ++LL H NVV+L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 127 FFSTTE-----KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAY 181
+ K +YL V ++ + ++ + + + L +K + L Y
Sbjct: 86 CRTKASPYNRCKGSIYL--VFDFCEHDLAGLLSN---VLVKFTLSEIKRVMQMLLNGLYY 140
Query: 182 IHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLV---KGEPN--ISYICSRYYRAP 236
IH + HRD+K N+L+ LKL DFG A+ +PN + + + +YR P
Sbjct: 141 IHRN-KILHRDMKAANVLIT-RDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 296
EL+ G +Y ID+W AGC++AE+ P+ G + QL I ++ G+ T E +
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE----VW 254
Query: 297 PNYTEF----KFPQIKAHPWHKIFQKRMP-----PEAVDLVSRLLQYSPNLRSTAFDAV 346
PN + K +K + + R+ P A+DL+ +LL P R + DA+
Sbjct: 255 PNVDNYELYEKLELVKGQ--KRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDAL 311
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 145/300 (48%), Gaps = 38/300 (12%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 126
+G G+FG VF+A+ +TG+ VA+KKVL + + RE++ ++LL H NVV+L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 127 FFSTTE-----KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAY 181
+ K +YL V ++ + ++ + + + L +K + L Y
Sbjct: 86 CRTKASPYNRCKASIYL--VFDFCEHDLAGLLSN---VLVKFTLSEIKRVMQMLLNGLYY 140
Query: 182 IHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLV---KGEPN--ISYICSRYYRAP 236
IH + HRD+K N+L+ LKL DFG A+ +PN + + + +YR P
Sbjct: 141 IHRN-KILHRDMKAANVLIT-RDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 296
EL+ G +Y ID+W AGC++AE+ P+ G + QL I ++ G+ T E +
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE----VW 254
Query: 297 PNYTEF----KFPQIKAHPWHKIFQKRMP-----PEAVDLVSRLLQYSPNLRSTAFDAVG 347
PN + K +K + + R+ P A+DL+ +LL P R + DA+
Sbjct: 255 PNVDNYELYEKLELVKGQ--KRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 312
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 146/297 (49%), Gaps = 32/297 (10%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHC 126
+G G+FG VF+A+ +TG+ VA+KKVL + + RE++ ++LL H NVV+L
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 127 FFSTTE-----KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAY 181
+ K +YL V ++ + ++ + + + L +K + L Y
Sbjct: 85 CRTKASPYNRCKGSIYL--VFDFCEHDLAGLLSN---VLVKFTLSEIKRVMQMLLNGLYY 139
Query: 182 IHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLV---KGEPN--ISYICSRYYRAP 236
IH + HRD+K N+L+ LKL DFG A+ +PN + + + +YR P
Sbjct: 140 IHRN-KILHRDMKAANVLIT-RDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 197
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 296
EL+ G +Y ID+W AGC++AE+ P+ G + QL I ++ G+ T E ++
Sbjct: 198 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD 257
Query: 297 PNYTEF-KFPQIKAHPWHKIFQKRMP-----PEAVDLVSRLLQYSPNLRSTAFDAVG 347
NY + K +K + + R+ P A+DL+ +LL P R + DA+
Sbjct: 258 -NYELYEKLELVKGQ--KRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 133/291 (45%), Gaps = 49/291 (16%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIK-------KVLQDKRYKNRELQTMRLLDHPN 119
Y +RV+G GSFG V K TG+ A+K K DK RE+Q ++ LDHPN
Sbjct: 51 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 110
Query: 120 VVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICR 177
++ L F +D+ Y LV E E +I +R + Q+
Sbjct: 111 IMKLYEFF-----EDKGYFYLVGEVYTGGELFDEIISR-----KRFSEVDAARIIRQVLS 160
Query: 178 ALAYIHNTIGVCHRDIKPQNLLVNPHTH--QLKLCDFGSAKVLVKGEPNISYICSRYYRA 235
+ Y+H + HRD+KP+NLL+ + +++ DFG + + I + YY A
Sbjct: 161 GITYMHKN-KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIA 219
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM 295
PE++ G Y D+WS G +L LL G P F G + D L ++ K
Sbjct: 220 PEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK------------- 264
Query: 296 NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
YT F+ PQ W K++ A DL+ ++L Y P++R +A DA+
Sbjct: 265 -GKYT-FELPQ-----W-----KKVSESAKDLIRKMLTYVPSMRISARDAL 303
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 133/291 (45%), Gaps = 49/291 (16%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIK-------KVLQDKRYKNRELQTMRLLDHPN 119
Y +RV+G GSFG V K TG+ A+K K DK RE+Q ++ LDHPN
Sbjct: 52 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 111
Query: 120 VVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICR 177
++ L F +D+ Y LV E E +I +R + Q+
Sbjct: 112 IMKLYEFF-----EDKGYFYLVGEVYTGGELFDEIISR-----KRFSEVDAARIIRQVLS 161
Query: 178 ALAYIHNTIGVCHRDIKPQNLLVNPHTH--QLKLCDFGSAKVLVKGEPNISYICSRYYRA 235
+ Y+H + HRD+KP+NLL+ + +++ DFG + + I + YY A
Sbjct: 162 GITYMHKN-KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIA 220
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM 295
PE++ G Y D+WS G +L LL G P F G + D L ++ K
Sbjct: 221 PEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK------------- 265
Query: 296 NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
YT F+ PQ W K++ A DL+ ++L Y P++R +A DA+
Sbjct: 266 -GKYT-FELPQ-----W-----KKVSESAKDLIRKMLTYVPSMRISARDAL 304
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 133/291 (45%), Gaps = 49/291 (16%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIK-------KVLQDKRYKNRELQTMRLLDHPN 119
Y +RV+G GSFG V K TG+ A+K K DK RE+Q ++ LDHPN
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 87
Query: 120 VVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICR 177
++ L F +D+ Y LV E E +I +R + Q+
Sbjct: 88 IMKLYEFF-----EDKGYFYLVGEVYTGGELFDEIISR-----KRFSEVDAARIIRQVLS 137
Query: 178 ALAYIHNTIGVCHRDIKPQNLLVNPHTH--QLKLCDFGSAKVLVKGEPNISYICSRYYRA 235
+ Y+H + HRD+KP+NLL+ + +++ DFG + + I + YY A
Sbjct: 138 GITYMHKN-KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIA 196
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM 295
PE++ G Y D+WS G +L LL G P F G + D L ++ K
Sbjct: 197 PEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK------------- 241
Query: 296 NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
YT F+ PQ W K++ A DL+ ++L Y P++R +A DA+
Sbjct: 242 -GKYT-FELPQ-----W-----KKVSESAKDLIRKMLTYVPSMRISARDAL 280
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 133/291 (45%), Gaps = 49/291 (16%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIK-------KVLQDKRYKNRELQTMRLLDHPN 119
Y +RV+G GSFG V K TG+ A+K K DK RE+Q ++ LDHPN
Sbjct: 34 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 93
Query: 120 VVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICR 177
++ L F +D+ Y LV E E +I +R + Q+
Sbjct: 94 IMKLYEFF-----EDKGYFYLVGEVYTGGELFDEIISR-----KRFSEVDAARIIRQVLS 143
Query: 178 ALAYIHNTIGVCHRDIKPQNLLVNPHTH--QLKLCDFGSAKVLVKGEPNISYICSRYYRA 235
+ Y+H + HRD+KP+NLL+ + +++ DFG + + I + YY A
Sbjct: 144 GITYMHKN-KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIA 202
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM 295
PE++ G Y D+WS G +L LL G P F G + D L ++ K
Sbjct: 203 PEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK------------- 247
Query: 296 NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
YT F+ PQ W K++ A DL+ ++L Y P++R +A DA+
Sbjct: 248 -GKYT-FELPQ-----W-----KKVSESAKDLIRKMLTYVPSMRISARDAL 286
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 129/291 (44%), Gaps = 49/291 (16%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIK-------KVLQDKRYKNRELQTMRLLDHPN 119
Y +RV+G GSFG V K TG+ A+K K DK RE+Q ++ LDHPN
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 87
Query: 120 VVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICR 177
+ L F +D+ Y LV E E +I +R + Q+
Sbjct: 88 IXKLYEFF-----EDKGYFYLVGEVYTGGELFDEIISR-----KRFSEVDAARIIRQVLS 137
Query: 178 ALAYIHNTIGVCHRDIKPQNLLVNPHTH--QLKLCDFGSAKVLVKGEPNISYICSRYYRA 235
+ Y H + HRD+KP+NLL+ + +++ DFG + + I + YY A
Sbjct: 138 GITYXHKN-KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIA 196
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM 295
PE++ G Y D+WS G +L LL G P F G + D L ++ K
Sbjct: 197 PEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK------------- 241
Query: 296 NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
YT F+ PQ W K++ A DL+ + L Y P+ R +A DA+
Sbjct: 242 -GKYT-FELPQ-----W-----KKVSESAKDLIRKXLTYVPSXRISARDAL 280
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 124/254 (48%), Gaps = 29/254 (11%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKV----LQDKRYKN---RELQTMRLLDHP 118
++ E+ +G G F V++A CL G VA+KKV L D + + +E+ ++ L+HP
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 119 NVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICR 177
NV+ F E LN+VLE + R+IKH K + +P V YF Q+C
Sbjct: 93 NVIKYYASFIEDNE-----LNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCS 147
Query: 178 ALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL-VKGEPNISYICSRYYRAP 236
AL ++H+ V HRDIKP N+ + T +KL D G + K S + + YY +P
Sbjct: 148 ALEHMHSR-RVMHRDIKPANVFITA-TGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSP 205
Query: 237 ELIFGATEYTAAIDIWSAGCVLAEL-LLGQPLFPGESGVDQLVEIIKVLGTPT------R 289
E I Y DIWS GC+L E+ L P + + + L + I+ P
Sbjct: 206 ERIH-ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYS 264
Query: 290 EEIK-----CMNPN 298
EE++ C+NP+
Sbjct: 265 EELRQLVNMCINPD 278
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 146/322 (45%), Gaps = 44/322 (13%)
Query: 59 GQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLDHP 118
G+P + Y+ R +G G F V+ AK + VA+K V DK Y ++LL
Sbjct: 13 GEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRV 72
Query: 119 N--------VVSLKHCF-----FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQR-MP 164
N + H F+ + +++ +V E + E + +IK K R +P
Sbjct: 73 NDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIK---KYEHRGIP 129
Query: 165 LIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVN-----PHTHQLKLCDFGSAKVLV 219
LIYVK Q+ L Y+H G+ H DIKP+N+L+ + Q+K+ D G+A
Sbjct: 130 LIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA--CW 187
Query: 220 KGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESG------ 273
E + I +R YR+PE++ GA + DIWS C++ EL+ G LF + G
Sbjct: 188 YDEHYTNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD 246
Query: 274 VDQLVEIIKVLG------------TPTREEIKCMNPNYTEFKFPQIKAHPWHKI-FQKRM 320
D + +II++LG T T + + N ++ KF ++ K F K
Sbjct: 247 DDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDE 306
Query: 321 PPEAVDLVSRLLQYSPNLRSTA 342
E D +S +LQ P R+ A
Sbjct: 307 AKEISDFLSPMLQLDPRKRADA 328
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 146/322 (45%), Gaps = 44/322 (13%)
Query: 59 GQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLDHP 118
G+P + Y+ R +G G F V+ AK + VA+K V DK Y ++LL
Sbjct: 13 GEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRV 72
Query: 119 N--------VVSLKHCF-----FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQR-MP 164
N + H F+ + +++ +V E + E + +IK K R +P
Sbjct: 73 NDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIK---KYEHRGIP 129
Query: 165 LIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVN-----PHTHQLKLCDFGSAKVLV 219
LIYVK Q+ L Y+H G+ H DIKP+N+L+ + Q+K+ D G+A
Sbjct: 130 LIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA--CW 187
Query: 220 KGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESG------ 273
E + I +R YR+PE++ GA + DIWS C++ EL+ G LF + G
Sbjct: 188 YDEHYTNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD 246
Query: 274 VDQLVEIIKVLG------------TPTREEIKCMNPNYTEFKFPQIKAHPWHKI-FQKRM 320
D + +II++LG T T + + N ++ KF ++ K F K
Sbjct: 247 DDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDE 306
Query: 321 PPEAVDLVSRLLQYSPNLRSTA 342
E D +S +LQ P R+ A
Sbjct: 307 AKEISDFLSPMLQLDPRKRADA 328
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 109/214 (50%), Gaps = 18/214 (8%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIK----KVLQDKRYKNR---ELQTMRLLDHP 118
+Y + +G GSFG V A TG+ VA+K KVL + R E+ +RLL HP
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 119 NVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRA 178
+++ L S KDE+ + V+EY + I KMS++ + +F QI A
Sbjct: 75 HIIKLYDVIKS---KDEIIM--VIEYAGNELFDYIVQRDKMSEQE----ARRFFQQIISA 125
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 238
+ Y H + HRD+KP+NLL++ H + +K+ DFG + ++ G + S Y APE+
Sbjct: 126 VEYCHRH-KIVHRDLKPENLLLDEHLN-VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV 183
Query: 239 IFGATEYTAAIDIWSAGCVLAELLLGQPLFPGES 272
I G +D+WS G +L +L + F ES
Sbjct: 184 ISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES 217
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 109/214 (50%), Gaps = 18/214 (8%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIK----KVLQDKRYKNR---ELQTMRLLDHP 118
+Y + +G GSFG V A TG+ VA+K KVL + R E+ +RLL HP
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 119 NVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRA 178
+++ L S KDE+ + V+EY + I KMS++ + +F QI A
Sbjct: 74 HIIKLYDVIKS---KDEIIM--VIEYAGNELFDYIVQRDKMSEQE----ARRFFQQIISA 124
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 238
+ Y H + HRD+KP+NLL++ H + +K+ DFG + ++ G + S Y APE+
Sbjct: 125 VEYCHRH-KIVHRDLKPENLLLDEHLN-VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV 182
Query: 239 IFGATEYTAAIDIWSAGCVLAELLLGQPLFPGES 272
I G +D+WS G +L +L + F ES
Sbjct: 183 ISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES 216
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 109/214 (50%), Gaps = 18/214 (8%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIK----KVLQDKRYKNR---ELQTMRLLDHP 118
+Y + +G GSFG V A TG+ VA+K KVL + R E+ +RLL HP
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 119 NVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRA 178
+++ L S KDE+ + V+EY + I KMS++ + +F QI A
Sbjct: 65 HIIKLYDVIKS---KDEIIM--VIEYAGNELFDYIVQRDKMSEQE----ARRFFQQIISA 115
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 238
+ Y H + HRD+KP+NLL++ H + +K+ DFG + ++ G + S Y APE+
Sbjct: 116 VEYCHRH-KIVHRDLKPENLLLDEHLN-VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV 173
Query: 239 IFGATEYTAAIDIWSAGCVLAELLLGQPLFPGES 272
I G +D+WS G +L +L + F ES
Sbjct: 174 ISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES 207
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 109/214 (50%), Gaps = 18/214 (8%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIK----KVLQDKRYKNR---ELQTMRLLDHP 118
+Y + +G GSFG V A TG+ VA+K KVL + R E+ +RLL HP
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 119 NVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRA 178
+++ L S KDE+ + V+EY + I KMS++ + +F QI A
Sbjct: 69 HIIKLYDVIKS---KDEIIM--VIEYAGNELFDYIVQRDKMSEQE----ARRFFQQIISA 119
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 238
+ Y H + HRD+KP+NLL++ H + +K+ DFG + ++ G + S Y APE+
Sbjct: 120 VEYCHRH-KIVHRDLKPENLLLDEHLN-VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV 177
Query: 239 IFGATEYTAAIDIWSAGCVLAELLLGQPLFPGES 272
I G +D+WS G +L +L + F ES
Sbjct: 178 ISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES 211
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 137/276 (49%), Gaps = 58/276 (21%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 123
+++G GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 98
Query: 124 KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
+F+ + ++LY L E ++K+ K+ + Y +I AL Y+H
Sbjct: 99 ---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFYTAEIVSALEYLH 150
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 240
G+ HRD+KP+N+L+N H +++ DFG+AKVL K S++ + Y +PEL+
Sbjct: 151 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL- 207
Query: 241 GATEYTA--AIDIWSAGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMN 296
TE +A + D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 208 --TEKSACKSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL------------- 250
Query: 297 PNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLL 332
E+ FP+ K F P+A DLV +LL
Sbjct: 251 ----EYDFPE-------KFF-----PKARDLVEKLL 270
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 137/276 (49%), Gaps = 58/276 (21%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 123
+++G GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 94
Query: 124 KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
+F+ + ++LY L E ++K+ K+ + Y +I AL Y+H
Sbjct: 95 ---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFYTAEIVSALEYLH 146
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 240
G+ HRD+KP+N+L+N H +++ DFG+AKVL K S++ + Y +PEL+
Sbjct: 147 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL- 203
Query: 241 GATEYTA--AIDIWSAGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMN 296
TE +A + D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 204 --TEKSACKSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL------------- 246
Query: 297 PNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLL 332
E+ FP+ K F P+A DLV +LL
Sbjct: 247 ----EYDFPE-------KFF-----PKARDLVEKLL 266
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 135/276 (48%), Gaps = 58/276 (21%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 123
+++G GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 43 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 102
Query: 124 KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
CF + ++LY L E ++K+ K+ + Y +I AL Y+H
Sbjct: 103 YFCF---QDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFYTAEIVSALEYLH 154
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 240
G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 155 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL- 211
Query: 241 GATEYTA--AIDIWSAGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMN 296
TE +A + D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 212 --TEKSACKSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL------------- 254
Query: 297 PNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLL 332
E+ FP+ K F P+A DLV +LL
Sbjct: 255 ----EYDFPE-------KFF-----PKARDLVEKLL 274
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 115/228 (50%), Gaps = 17/228 (7%)
Query: 55 GGKN-GQPKQTIS--YMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNR---- 107
GG++ P QT M ER+ G G FG V + +TGE VAIK+ Q+ KNR
Sbjct: 2 GGRSPSLPTQTCGPWEMKERL-GTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWC 60
Query: 108 -ELQTMRLLDHPNVVSLKHC--FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMP 164
E+Q M+ L+HPNVVS + ++L L L +EY R + ++ +
Sbjct: 61 LEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPL-LAMEYCEGGDLRKYLNQFENCCGLK 119
Query: 165 LIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQL--KLCDFGSAKVLVKGE 222
++ I AL Y+H + HRD+KP+N+++ P +L K+ D G AK L +GE
Sbjct: 120 EGPIRTLLSDISSALRYLHEN-RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE 178
Query: 223 PNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLG-QPLFP 269
++ + Y APEL+ +YT +D WS G + E + G +P P
Sbjct: 179 LCTEFVGTLQYLAPELL-EQKKYTVTVDYWSFGTLAFECITGFRPFLP 225
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 115/228 (50%), Gaps = 17/228 (7%)
Query: 55 GGKN-GQPKQTIS--YMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNR---- 107
GG++ P QT M ER+ G G FG V + +TGE VAIK+ Q+ KNR
Sbjct: 3 GGRSPSLPTQTCGPWEMKERL-GTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWC 61
Query: 108 -ELQTMRLLDHPNVVSLKHC--FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMP 164
E+Q M+ L+HPNVVS + ++L L L +EY R + ++ +
Sbjct: 62 LEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPL-LAMEYCEGGDLRKYLNQFENCCGLK 120
Query: 165 LIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQL--KLCDFGSAKVLVKGE 222
++ I AL Y+H + HRD+KP+N+++ P +L K+ D G AK L +GE
Sbjct: 121 EGPIRTLLSDISSALRYLHEN-RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE 179
Query: 223 PNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLG-QPLFP 269
++ + Y APEL+ +YT +D WS G + E + G +P P
Sbjct: 180 LCTEFVGTLQYLAPELL-EQKKYTVTVDYWSFGTLAFECITGFRPFLP 226
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 137/276 (49%), Gaps = 58/276 (21%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 123
+++G GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 124 KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
+F+ + ++LY L E ++K+ K+ + Y +I AL Y+H
Sbjct: 96 ---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFYTAEIVSALEYLH 147
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 240
G+ HRD+KP+N+L+N H +++ DFG+AKVL K +++ + Y +PEL+
Sbjct: 148 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANAFVGTAQYVSPELL- 204
Query: 241 GATEYTA--AIDIWSAGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMN 296
TE +A + D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 205 --TEKSACKSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL------------- 247
Query: 297 PNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLL 332
E+ FP+ K F P+A DLV +LL
Sbjct: 248 ----EYDFPE-------KFF-----PKARDLVEKLL 267
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 138/283 (48%), Gaps = 72/283 (25%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 123
+++G GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 124 KHCFFSTTEKDELYLNL-------VLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQIC 176
+F+ + ++LY L +L+Y+ R I + R Y +I
Sbjct: 98 ---YFTFQDDEKLYFGLSYAKNGCLLKYI-----RKIGSFDETCTR-------FYTAEIV 142
Query: 177 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL---VKGEPNISYICSRYY 233
AL Y+H G+ HRD+KP+N+L+N H +++ DFG+AKVL K S++ + Y
Sbjct: 143 SALEYLHGK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANSFVGTAQY 200
Query: 234 RAPELIFGATEYTA--AIDIWSAGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTR 289
+PEL+ TE +A + D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 201 VSPELL---TEKSASKSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL------ 249
Query: 290 EEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLL 332
E+ FP+ K F P+A DLV +LL
Sbjct: 250 -----------EYDFPE-------KFF-----PKARDLVEKLL 269
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 136/276 (49%), Gaps = 58/276 (21%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 123
+++G GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 124 KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
+F+ + ++LY L E ++K+ K+ + Y +I AL Y+H
Sbjct: 98 ---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFYTAEIVSALEYLH 149
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 240
G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 150 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL- 206
Query: 241 GATEYTA--AIDIWSAGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMN 296
TE +A + D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 207 --TEKSAXKSSDLWALGCIIYQLVAGLP--PFRAGNEGLIFAKIIKL------------- 249
Query: 297 PNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLL 332
E+ FP+ K F P+A DLV +LL
Sbjct: 250 ----EYDFPE-------KFF-----PKARDLVEKLL 269
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 136/276 (49%), Gaps = 58/276 (21%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 123
+++G GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 124 KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
+F+ + ++LY L E ++K+ K+ + Y +I AL Y+H
Sbjct: 98 ---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFYTAEIVSALEYLH 149
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 240
G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 150 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL- 206
Query: 241 GATEYTA--AIDIWSAGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMN 296
TE +A + D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 207 --TEKSACKSSDLWALGCIIYQLVAGLP--PFRAGNEGLIFAKIIKL------------- 249
Query: 297 PNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLL 332
E+ FP+ K F P+A DLV +LL
Sbjct: 250 ----EYDFPE-------KFF-----PKARDLVEKLL 269
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 136/276 (49%), Gaps = 58/276 (21%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 123
+++G GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 124 KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
+F+ + ++LY L E ++K+ K+ + Y +I AL Y+H
Sbjct: 96 ---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFYTAEIVSALEYLH 147
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 240
G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 148 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL- 204
Query: 241 GATEYTA--AIDIWSAGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMN 296
TE +A + D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 205 --TEKSACKSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL------------- 247
Query: 297 PNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLL 332
E+ FP+ K F P+A DLV +LL
Sbjct: 248 ----EYDFPE-------KFF-----PKARDLVEKLL 267
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 136/276 (49%), Gaps = 58/276 (21%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 123
+++G GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 124 KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
+F+ + ++LY L E ++K+ K+ + Y +I AL Y+H
Sbjct: 98 ---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFYTAEIVSALEYLH 149
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 240
G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 150 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL- 206
Query: 241 GATEYTA--AIDIWSAGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMN 296
TE +A + D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 207 --TEKSACKSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL------------- 249
Query: 297 PNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLL 332
E+ FP+ K F P+A DLV +LL
Sbjct: 250 ----EYDFPE-------KFF-----PKARDLVEKLL 269
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 136/276 (49%), Gaps = 58/276 (21%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 123
+++G GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 124 KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
+F+ + ++LY L E ++K+ K+ + Y +I AL Y+H
Sbjct: 96 ---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFYTAEIVSALEYLH 147
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 240
G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 148 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL- 204
Query: 241 GATEYTA--AIDIWSAGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMN 296
TE +A + D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 205 --TEKSACKSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL------------- 247
Query: 297 PNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLL 332
E+ FP+ K F P+A DLV +LL
Sbjct: 248 ----EYDFPE-------KFF-----PKARDLVEKLL 267
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 136/276 (49%), Gaps = 58/276 (21%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 123
+++G GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 98
Query: 124 KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
+F+ + ++LY L E ++K+ K+ + Y +I AL Y+H
Sbjct: 99 ---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFYTAEIVSALEYLH 150
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 240
G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 151 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL- 207
Query: 241 GATEYTA--AIDIWSAGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMN 296
TE +A + D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 208 --TEKSACKSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL------------- 250
Query: 297 PNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLL 332
E+ FP+ K F P+A DLV +LL
Sbjct: 251 ----EYDFPE-------KFF-----PKARDLVEKLL 270
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 136/276 (49%), Gaps = 58/276 (21%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 123
+++G GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 124 KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
+F+ + ++LY L E ++K+ K+ + Y +I AL Y+H
Sbjct: 98 ---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFYTAEIVSALEYLH 149
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 240
G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 150 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL- 206
Query: 241 GATEYTA--AIDIWSAGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMN 296
TE +A + D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 207 --TEKSACKSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL------------- 249
Query: 297 PNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLL 332
E+ FP+ K F P+A DLV +LL
Sbjct: 250 ----EYDFPE-------KFF-----PKARDLVEKLL 269
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 136/276 (49%), Gaps = 58/276 (21%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 123
+++G GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 124 KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
+F+ + ++LY L E ++K+ K+ + Y +I AL Y+H
Sbjct: 98 ---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFYTAEIVSALEYLH 149
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 240
G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 150 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL- 206
Query: 241 GATEYTA--AIDIWSAGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMN 296
TE +A + D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 207 --TEKSACKSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL------------- 249
Query: 297 PNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLL 332
E+ FP+ K F P+A DLV +LL
Sbjct: 250 ----EYDFPE-------KFF-----PKARDLVEKLL 269
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 135/277 (48%), Gaps = 60/277 (21%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKR--------YKNRELQTMRLLDHPNVVS 122
+++G GSF V A+ L T AIK +L+ + Y RE M LDHP V
Sbjct: 13 KILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 71
Query: 123 LKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
L +F+ + ++LY L E ++K+ K+ + Y +I AL Y+
Sbjct: 72 L---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFYTAEIVSALEYL 123
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL---VKGEPNISYICSRYYRAPELI 239
H G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 124 HGK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 181
Query: 240 FGATEYTA--AIDIWSAGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCM 295
TE +A + D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 182 ---TEKSACKSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL------------ 224
Query: 296 NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLL 332
E+ FP+ K F P+A DLV +LL
Sbjct: 225 -----EYDFPE-------KFF-----PKARDLVEKLL 244
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 135/277 (48%), Gaps = 60/277 (21%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKR--------YKNRELQTMRLLDHPNVVS 122
+++G GSF V A+ L T AIK +L+ + Y RE M LDHP V
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 93
Query: 123 LKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
L +F+ + ++LY L E ++K+ K+ + Y +I AL Y+
Sbjct: 94 L---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFYTAEIVSALEYL 145
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL---VKGEPNISYICSRYYRAPELI 239
H G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 146 HGK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 203
Query: 240 FGATEYTA--AIDIWSAGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCM 295
TE +A + D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 204 ---TEKSACKSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL------------ 246
Query: 296 NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLL 332
E+ FP+ K F P+A DLV +LL
Sbjct: 247 -----EYDFPE-------KFF-----PKARDLVEKLL 266
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 135/277 (48%), Gaps = 60/277 (21%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKR--------YKNRELQTMRLLDHPNVVS 122
+++G GSF V A+ L T AIK +L+ + Y RE M LDHP V
Sbjct: 14 KILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 72
Query: 123 LKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
L +F+ + ++LY L E ++K+ K+ + Y +I AL Y+
Sbjct: 73 L---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFYTAEIVSALEYL 124
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL---VKGEPNISYICSRYYRAPELI 239
H G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 125 HGK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 182
Query: 240 FGATEYTA--AIDIWSAGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCM 295
TE +A + D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 183 ---TEKSACKSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL------------ 225
Query: 296 NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLL 332
E+ FP+ K F P+A DLV +LL
Sbjct: 226 -----EYDFPE-------KFF-----PKARDLVEKLL 245
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 135/277 (48%), Gaps = 60/277 (21%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKR--------YKNRELQTMRLLDHPNVVS 122
+++G GSF V A+ L T AIK +L+ + Y RE M LDHP V
Sbjct: 20 KILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 78
Query: 123 LKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
L +F+ + ++LY L E ++K+ K+ + Y +I AL Y+
Sbjct: 79 L---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFYTAEIVSALEYL 130
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL---VKGEPNISYICSRYYRAPELI 239
H G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 131 HGK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 188
Query: 240 FGATEYTA--AIDIWSAGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCM 295
TE +A + D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 189 ---TEKSACKSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL------------ 231
Query: 296 NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLL 332
E+ FP+ K F P+A DLV +LL
Sbjct: 232 -----EYDFPE-------KFF-----PKARDLVEKLL 251
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 135/277 (48%), Gaps = 60/277 (21%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKR--------YKNRELQTMRLLDHPNVVS 122
+++G GSF V A+ L T AIK +L+ + Y RE M LDHP V
Sbjct: 16 KILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 74
Query: 123 LKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
L +F+ + ++LY L E ++K+ K+ + Y +I AL Y+
Sbjct: 75 L---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFYTAEIVSALEYL 126
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL---VKGEPNISYICSRYYRAPELI 239
H G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 127 HGK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 184
Query: 240 FGATEYTA--AIDIWSAGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCM 295
TE +A + D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 185 ---TEKSACKSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL------------ 227
Query: 296 NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLL 332
E+ FP+ K F P+A DLV +LL
Sbjct: 228 -----EYDFPE-------KFF-----PKARDLVEKLL 247
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 135/277 (48%), Gaps = 60/277 (21%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKR--------YKNRELQTMRLLDHPNVVS 122
+++G GSF V A+ L T AIK +L+ + Y RE M LDHP V
Sbjct: 15 KILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 73
Query: 123 LKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
L +F+ + ++LY L E ++K+ K+ + Y +I AL Y+
Sbjct: 74 L---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFYTAEIVSALEYL 125
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL---VKGEPNISYICSRYYRAPELI 239
H G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 126 HGK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 183
Query: 240 FGATEYTA--AIDIWSAGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCM 295
TE +A + D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 184 ---TEKSACKSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL------------ 226
Query: 296 NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLL 332
E+ FP+ K F P+A DLV +LL
Sbjct: 227 -----EYDFPE-------KFF-----PKARDLVEKLL 246
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 104/205 (50%), Gaps = 22/205 (10%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN-------RELQTMRLLDHPNVVSL 123
R +GHGSFG V+ A+ + E VAIKK+ + N +E++ ++ L HPN +
Sbjct: 60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 119
Query: 124 KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
+ C+ E LV+EY + +++ H K Q + + V + + LAY+H
Sbjct: 120 RGCYLR-----EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVT---HGALQGLAYLH 171
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGAT 243
+ + HRD+K N+L++ +KL DFGSA ++ P ++ + Y+ APE+I
Sbjct: 172 SH-NMIHRDVKAGNILLS-EPGLVKLGDFGSASIMA---PANXFVGTPYWMAPEVILAMD 226
Query: 244 E--YTAAIDIWSAGCVLAELLLGQP 266
E Y +D+WS G EL +P
Sbjct: 227 EGQYDGKVDVWSLGITCIELAERKP 251
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 120/279 (43%), Gaps = 38/279 (13%)
Query: 72 VVGHGSFGVVFQAKCLETGEAVAIKKVLQ-DKRYK---NRELQTMRLLDHPNVVSLKHCF 127
V+G G++G+V+ + L +AIK++ + D RY + E+ + L H N+V F
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 128 FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIG 187
+ ++ + +E VP + + + Y QI L Y+H+
Sbjct: 89 -----SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN-Q 142
Query: 188 VCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEP-NISYICSRYYRAPELI-FGATEY 245
+ HRDIK N+L+N ++ LK+ DFG++K L P ++ + Y APE+I G Y
Sbjct: 143 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGY 202
Query: 246 TAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFP 305
A DIWS GC + E+ G+P F + P FK
Sbjct: 203 GKAADIWSLGCTIIEMATGKPPF-----------------------YELGEPQAAMFKVG 239
Query: 306 QIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFD 344
K HP + M EA + + + P+ R+ A D
Sbjct: 240 MFKVHPE---IPESMSAEAKAFILKCFEPDPDKRACAND 275
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 141/298 (47%), Gaps = 46/298 (15%)
Query: 58 NGQPKQTIS--YMAERVVGHGSFGVVFQAKCLETGEAVAIK--KVLQDKRYKNRELQTMR 113
+G + +S + E +G G+ +V++ K T + A+K K DK+ E+ +
Sbjct: 44 DGSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLL 103
Query: 114 LLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLY 171
L HPN++ LK F + TE ++LVLE V E R+++ Y S+R VK
Sbjct: 104 RLSHPNIIKLKEIFETPTE-----ISLVLELVTGGELFDRIVEKGY-YSERDAADAVK-- 155
Query: 172 FYQICRALAYIHNTIGVCHRDIKPQNLL-VNPHTHQ-LKLCDFGSAKVLVKGEPNISYIC 229
QI A+AY+H G+ HRD+KP+NLL P LK+ DFG +K+ V+ + + +C
Sbjct: 156 --QILEAVAYLHEN-GIVHRDLKPENLLYATPAPDAPLKIADFGLSKI-VEHQVLMKTVC 211
Query: 230 -SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 288
+ Y APE++ G Y +D+WS G + LL G F E G DQ +
Sbjct: 212 GTPGYCAPEILRGCA-YGPEVDMWSVGIITYILLCGFEPFYDERG-DQFM---------F 260
Query: 289 REEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
R + C E+ F PW + A DLV +L+ P R T F A+
Sbjct: 261 RRILNC------EYYF----ISPWW----DEVSLNAKDLVRKLIVLDPKKRLTTFQAL 304
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 134/277 (48%), Gaps = 60/277 (21%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKR--------YKNRELQTMRLLDHPNVVS 122
+++G GSF A+ L T AIK +L+ + Y RE M LDHP V
Sbjct: 36 KILGEGSFSTTVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 94
Query: 123 LKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
L +F+ + ++LY L E ++K+ K+ + Y +I AL Y+
Sbjct: 95 L---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFYTAEIVSALEYL 146
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL---VKGEPNISYICSRYYRAPELI 239
H G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 147 HGK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
Query: 240 FGATEYTA--AIDIWSAGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCM 295
TE +A + D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 205 ---TEKSACKSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL------------ 247
Query: 296 NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLL 332
E+ FP+ K F P+A DLV +LL
Sbjct: 248 -----EYDFPE-------KFF-----PKARDLVEKLL 267
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 124/280 (44%), Gaps = 46/280 (16%)
Query: 72 VVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN-------RELQTMRLLDHPNVVSLK 124
++G GSFG V + K T + A+K V+ KN RE++ ++ LDHPN++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVK-VINKASAKNKDTSTILREVELLKKLDHPNIMKL- 86
Query: 125 HCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN 184
F + Y+ L E +IK + S+ +K Q+ + Y+H
Sbjct: 87 --FEILEDSSSFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIK----QVFSGITYMHK 139
Query: 185 TIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
+ HRD+KP+N+L+ +K+ DFG + + I + YY APE++ G
Sbjct: 140 H-NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT 198
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 302
Y D+WSAG +L LL G P F G++ D L K + F
Sbjct: 199 --YDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL---------------KRVETGKYAF 241
Query: 303 KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTA 342
PQ W I +A DL+ ++L + P+LR TA
Sbjct: 242 DLPQ-----WRTI-----SDDAKDLIRKMLTFHPSLRITA 271
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 120/279 (43%), Gaps = 38/279 (13%)
Query: 72 VVGHGSFGVVFQAKCLETGEAVAIKKVLQ-DKRYK---NRELQTMRLLDHPNVVSLKHCF 127
V+G G++G+V+ + L +AIK++ + D RY + E+ + L H N+V F
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 128 FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIG 187
+ ++ + +E VP + + + Y QI L Y+H+
Sbjct: 75 -----SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN-Q 128
Query: 188 VCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEP-NISYICSRYYRAPELI-FGATEY 245
+ HRDIK N+L+N ++ LK+ DFG++K L P ++ + Y APE+I G Y
Sbjct: 129 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGY 188
Query: 246 TAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFP 305
A DIWS GC + E+ G+P F + P FK
Sbjct: 189 GKAADIWSLGCTIIEMATGKPPF-----------------------YELGEPQAAMFKVG 225
Query: 306 QIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFD 344
K HP + M EA + + + P+ R+ A D
Sbjct: 226 MFKVHPE---IPESMSAEAKAFILKCFEPDPDKRACAND 261
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 104/205 (50%), Gaps = 22/205 (10%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN-------RELQTMRLLDHPNVVSL 123
R +GHGSFG V+ A+ + E VAIKK+ + N +E++ ++ L HPN +
Sbjct: 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 80
Query: 124 KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
+ C+ E LV+EY + +++ H K Q + + V + + LAY+H
Sbjct: 81 RGCYLR-----EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVT---HGALQGLAYLH 132
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGAT 243
+ + HRD+K N+L++ +KL DFGSA ++ P ++ + Y+ APE+I
Sbjct: 133 SH-NMIHRDVKAGNILLS-EPGLVKLGDFGSASIMA---PANXFVGTPYWMAPEVILAMD 187
Query: 244 E--YTAAIDIWSAGCVLAELLLGQP 266
E Y +D+WS G EL +P
Sbjct: 188 EGQYDGKVDVWSLGITCIELAERKP 212
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 120/227 (52%), Gaps = 29/227 (12%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKR--YKNRELQTMRLLDHPNVVSL 123
+++G GSF V A+ L T AIK ++++ + Y RE M LDHP V L
Sbjct: 41 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 100
Query: 124 KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
+F+ + ++LY L E ++K+ K+ + Y +I AL Y+H
Sbjct: 101 ---YFTFQDDEKLYFGLSYAKNGE----LLKYIRKIGS-FDETCTRFYTAEIVSALEYLH 152
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIF 240
G+ HRD+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+
Sbjct: 153 GK-GIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL- 209
Query: 241 GATEYTA--AIDIWSAGCVLAELLLGQPLFPGESGVDQLV--EIIKV 283
TE +A + D+W+ GC++ +L+ G P P +G + L+ +IIK+
Sbjct: 210 --TEKSACKSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL 252
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 131/287 (45%), Gaps = 44/287 (15%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKV----LQDKRYKNRELQTMRLLDHPNVVS 122
Y E +G GS+G V A T A KK+ ++D +E++ M+ LDHPN++
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 70
Query: 123 LKHCFFSTTEKDELYLNLVLEYVPETVHRVI-KHHYKMSQRMPLIYVKLYFYQICRALAY 181
L F T ++YL + L E RV+ K ++ S ++ + A+AY
Sbjct: 71 LYETFEDNT---DIYLVMELCTGGELFERVVHKRVFRESDAARIM------KDVLSAVAY 121
Query: 182 IHNTIGVCHRDIKPQN--LLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 239
H + V HRD+KP+N L + LKL DFG A G+ + + + YY +P+++
Sbjct: 122 CHK-LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVL 180
Query: 240 FGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY 299
G Y D WSAG ++ LL G P F + + +++I + GT
Sbjct: 181 EGL--YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIRE--GT------------- 223
Query: 300 TEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
F FP+ W + P+A L+ RLL SP R T+ A+
Sbjct: 224 --FTFPE---KDWLNV-----SPQAESLIRRLLTKSPKQRITSLQAL 260
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 131/287 (45%), Gaps = 44/287 (15%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKV----LQDKRYKNRELQTMRLLDHPNVVS 122
Y E +G GS+G V A T A KK+ ++D +E++ M+ LDHPN++
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 87
Query: 123 LKHCFFSTTEKDELYLNLVLEYVPETVHRVI-KHHYKMSQRMPLIYVKLYFYQICRALAY 181
L F T ++YL + L E RV+ K ++ S ++ + A+AY
Sbjct: 88 LYETFEDNT---DIYLVMELCTGGELFERVVHKRVFRESDAARIM------KDVLSAVAY 138
Query: 182 IHNTIGVCHRDIKPQN--LLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 239
H + V HRD+KP+N L + LKL DFG A G+ + + + YY +P+++
Sbjct: 139 CHK-LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVL 197
Query: 240 FGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY 299
G Y D WSAG ++ LL G P F + + +++I + GT
Sbjct: 198 EGL--YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIRE--GT------------- 240
Query: 300 TEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
F FP+ W + P+A L+ RLL SP R T+ A+
Sbjct: 241 --FTFPE---KDWLNV-----SPQAESLIRRLLTKSPKQRITSLQAL 277
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 124/280 (44%), Gaps = 46/280 (16%)
Query: 72 VVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN-------RELQTMRLLDHPNVVSLK 124
++G GSFG V + K T + A+K V+ KN RE++ ++ LDHPN++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVK-VINKASAKNKDTSTILREVELLKKLDHPNIMKL- 86
Query: 125 HCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN 184
F + Y+ L E +IK + S+ +K Q+ + Y+H
Sbjct: 87 --FEILEDSSSFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIK----QVFSGITYMHK 139
Query: 185 TIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
+ HRD+KP+N+L+ +K+ DFG + + I + YY APE++ G
Sbjct: 140 H-NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT 198
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 302
Y D+WSAG +L LL G P F G++ D L K + F
Sbjct: 199 --YDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL---------------KRVETGKYAF 241
Query: 303 KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTA 342
PQ W I +A DL+ ++L + P+LR TA
Sbjct: 242 DLPQ-----WRTI-----SDDAKDLIRKMLTFHPSLRITA 271
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 124/280 (44%), Gaps = 46/280 (16%)
Query: 72 VVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN-------RELQTMRLLDHPNVVSLK 124
++G GSFG V + K T + A+K V+ KN RE++ ++ LDHPN++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVK-VINKASAKNKDTSTILREVELLKKLDHPNIMKL- 86
Query: 125 HCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN 184
F + Y+ L E +IK + S+ +K Q+ + Y+H
Sbjct: 87 --FEILEDSSSFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIK----QVFSGITYMHK 139
Query: 185 TIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
+ HRD+KP+N+L+ +K+ DFG + + I + YY APE++ G
Sbjct: 140 H-NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT 198
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 302
Y D+WSAG +L LL G P F G++ D L K + F
Sbjct: 199 --YDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL---------------KRVETGKYAF 241
Query: 303 KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTA 342
PQ W I +A DL+ ++L + P+LR TA
Sbjct: 242 DLPQ-----WRTI-----SDDAKDLIRKMLTFHPSLRITA 271
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 106/217 (48%), Gaps = 24/217 (11%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN--------RELQTMRLLDH 117
+Y ++ +G G+F V A+ + TG VA+K + DK N RE++ M++L+H
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKII--DKTQLNPTSLQKLFREVRIMKILNH 73
Query: 118 PNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQI 175
PN+V L F E E L LV+EY E ++ H RM + F QI
Sbjct: 74 PNIVKL----FEVIET-EKTLYLVMEYASGGEVFDYLVAHG-----RMKEKEARAKFRQI 123
Query: 176 CRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRA 235
A+ Y H + HRD+K +NLL++ + +K+ DFG + G ++ S Y A
Sbjct: 124 VSAVQYCHQKY-IVHRDLKAENLLLDGDMN-IKIADFGFSNEFTVGNKLDTFCGSPPYAA 181
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGES 272
PEL G +D+WS G +L L+ G F G++
Sbjct: 182 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 139/313 (44%), Gaps = 44/313 (14%)
Query: 48 HIIVTTIGGKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKV----LQDKR 103
H IVT K G + ++G G FG V + + TG +A K + ++DK
Sbjct: 75 HRIVT---AKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKE 131
Query: 104 YKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQ 161
E+ M LDH N++ L F S + + LV+EYV E R+I Y +++
Sbjct: 132 EVKNEISVMNQLDHANLIQLYDAFESKND-----IVLVMEYVDGGELFDRIIDESYNLTE 186
Query: 162 RMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLL-VNPHTHQLKLCDFGSAKVLVK 220
++++K QIC + ++H + + H D+KP+N+L VN Q+K+ DFG A+
Sbjct: 187 LDTILFMK----QICEGIRHMHQ-MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKP 241
Query: 221 GEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEI 280
E + + APE++ + D+WS G + LL G F G++ + L I
Sbjct: 242 REKLKVNFGTPEFLAPEVV-NYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNI 300
Query: 281 IKVLGTPTREEIKCMNPNYTEF--------KFPQIKA-----HPW---HKIF-------Q 317
+ EE + ++ EF K +I A HPW HK+ +
Sbjct: 301 LACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDHKLHSRLSAQKK 360
Query: 318 KRMPPEAVDLVSR 330
K +A D V++
Sbjct: 361 KNRGSDAQDFVTK 373
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 144/299 (48%), Gaps = 56/299 (18%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-------------NRELQTMR 113
Y+ + +G G+ G V A +T + VAIK ++ +++ E++ ++
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIK-IISKRKFAIGSAREADPALNVETEIEILK 70
Query: 114 LLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFY 173
L+HP ++ +K+ F + ++ Y+ L L E +V+ + +R+ KLYFY
Sbjct: 71 KLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVVGN-----KRLKEATCKLYFY 121
Query: 174 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNI-SYIC- 229
Q+ A+ Y+H G+ HRD+KP+N+L++ +K+ DFG +K+L GE ++ +C
Sbjct: 122 QMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCG 178
Query: 230 SRYYRAPELIF--GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 287
+ Y APE++ G Y A+D WS G +L L G P F L
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL---------- 228
Query: 288 TREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
+++I N+ P++ W ++ +K A+DLV +LL P R T +A+
Sbjct: 229 -KDQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEAL 273
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 144/299 (48%), Gaps = 56/299 (18%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-------------NRELQTMR 113
Y+ + +G G+ G V A +T + VAIK ++ +++ E++ ++
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIK-IISKRKFAIGSAREADPALNVETEIEILK 70
Query: 114 LLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFY 173
L+HP ++ +K+ F + ++ Y+ L L E +V+ + +R+ KLYFY
Sbjct: 71 KLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVVGN-----KRLKEATCKLYFY 121
Query: 174 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNI-SYIC- 229
Q+ A+ Y+H G+ HRD+KP+N+L++ +K+ DFG +K+L GE ++ +C
Sbjct: 122 QMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCG 178
Query: 230 SRYYRAPELIF--GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 287
+ Y APE++ G Y A+D WS G +L L G P F L
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL---------- 228
Query: 288 TREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
+++I N+ P++ W ++ +K A+DLV +LL P R T +A+
Sbjct: 229 -KDQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEAL 273
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 144/299 (48%), Gaps = 56/299 (18%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-------------NRELQTMR 113
Y+ + +G G+ G V A +T + VAIK ++ +++ E++ ++
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIK-IISKRKFAIGSAREADPALNVETEIEILK 70
Query: 114 LLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFY 173
L+HP ++ +K+ F + ++ Y+ L L E +V+ + +R+ KLYFY
Sbjct: 71 KLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVVGN-----KRLKEATCKLYFY 121
Query: 174 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNI-SYIC- 229
Q+ A+ Y+H G+ HRD+KP+N+L++ +K+ DFG +K+L GE ++ +C
Sbjct: 122 QMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCG 178
Query: 230 SRYYRAPELIF--GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 287
+ Y APE++ G Y A+D WS G +L L G P F L
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL---------- 228
Query: 288 TREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
+++I N+ P++ W ++ +K A+DLV +LL P R T +A+
Sbjct: 229 -KDQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEAL 273
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 144/299 (48%), Gaps = 56/299 (18%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-------------NRELQTMR 113
Y+ + +G G+ G V A +T + VAIK ++ +++ E++ ++
Sbjct: 11 YIMSKTLGSGACGEVKLAFERKTCKKVAIK-IISKRKFAIGSAREADPALNVETEIEILK 69
Query: 114 LLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFY 173
L+HP ++ +K+ F + ++ Y+ L L E +V+ + +R+ KLYFY
Sbjct: 70 KLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVVGN-----KRLKEATCKLYFY 120
Query: 174 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNI-SYIC- 229
Q+ A+ Y+H G+ HRD+KP+N+L++ +K+ DFG +K+L GE ++ +C
Sbjct: 121 QMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCG 177
Query: 230 SRYYRAPELIF--GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 287
+ Y APE++ G Y A+D WS G +L L G P F L
Sbjct: 178 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL---------- 227
Query: 288 TREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
+++I N+ P++ W ++ +K A+DLV +LL P R T +A+
Sbjct: 228 -KDQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEAL 272
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 127/277 (45%), Gaps = 50/277 (18%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 123
R +G G FG V+ A+ + +A+K + + + K RE++ L HPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 124 KHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F +T + L+LEY P TV+R ++ K ++ Y+ ++ AL+Y
Sbjct: 74 YGYFHDSTR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 124
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ V HRDIKP+NLL+ +LK+ DFG + V + + Y PE+I G
Sbjct: 125 HSK-KVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRAALCGTLDYLPPEMIEGR 181
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 302
+ +D+WS G + E L+G+P F + D I +V EF
Sbjct: 182 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRV-----------------EF 223
Query: 303 KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
FP + A DL+SRLL+++P+ R
Sbjct: 224 TFPDF------------VTEGARDLISRLLKHNPSQR 248
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 140/297 (47%), Gaps = 52/297 (17%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-------------NRELQTMR 113
Y+ + +G G+ G V A +T + VAIK ++ +++ E++ ++
Sbjct: 18 YIMSKTLGSGACGEVKLAFERKTCKKVAIK-IISKRKFAIGSAREADPALNVETEIEILK 76
Query: 114 LLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFY 173
L+HP ++ +K+ F + ++ Y+ L L E +V+ + +R+ KLYFY
Sbjct: 77 KLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVVGN-----KRLKEATCKLYFY 127
Query: 174 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISYICSR 231
Q+ A+ Y+H G+ HRD+KP+N+L++ +K+ DFG +K+L + + +
Sbjct: 128 QMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 186
Query: 232 YYRAPELIF--GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 289
Y APE++ G Y A+D WS G +L L G P F L +
Sbjct: 187 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL-----------K 235
Query: 290 EEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
++I N+ P++ W ++ +K A+DLV +LL P R T +A+
Sbjct: 236 DQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEAL 279
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 24/217 (11%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN--------RELQTMRLLDH 117
+Y + +G G+F V A+ + TG+ VA+K + DK N RE++ M++L+H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 118 PNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQI 175
PN+V L F E ++ L LV+EY E ++ H RM + F QI
Sbjct: 73 PNIVKL----FEVIETEKT-LYLVMEYASGGEVFDYLVAHG-----RMKEKEARAKFRQI 122
Query: 176 CRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRA 235
A+ Y H + HRD+K +NLL++ + +K+ DFG + G ++ S Y A
Sbjct: 123 VSAVQYCHQKF-IVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDTFCGSPPYAA 180
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGES 272
PEL G +D+WS G +L L+ G F G++
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 24/217 (11%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN--------RELQTMRLLDH 117
+Y + +G G+F V A+ + TG+ VA+K + DK N RE++ M++L+H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 118 PNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQI 175
PN+V L F E ++ L LV+EY E ++ H RM + F QI
Sbjct: 73 PNIVKL----FEVIETEKT-LYLVMEYASGGEVFDYLVAHG-----RMKEKEARAKFRQI 122
Query: 176 CRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRA 235
A+ Y H + HRD+K +NLL++ + +K+ DFG + G ++ S Y A
Sbjct: 123 VSAVQYCHQKF-IVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDTFCGSPPYAA 180
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGES 272
PEL G +D+WS G +L L+ G F G++
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 127/277 (45%), Gaps = 50/277 (18%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 123
R +G G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 31 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 90
Query: 124 KHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F T + L+LEY P TV+R ++ K ++ Y+ ++ AL+Y
Sbjct: 91 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 141
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ V HRDIKP+NLL+ +LK+ DFG + V + + Y PE+I G
Sbjct: 142 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 198
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 302
+ +D+WS G + E L+G+P F + + I +V EF
Sbjct: 199 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 240
Query: 303 KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
FP + A DL+SRLL+++P+ R
Sbjct: 241 TFPDF------------VTEGARDLISRLLKHNPSQR 265
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 127/277 (45%), Gaps = 50/277 (18%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 123
R +G G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 124 KHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F T + L+LEY P TV+R ++ K ++ Y+ ++ AL+Y
Sbjct: 79 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 129
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ V HRDIKP+NLL+ +LK+ DFG + V + + Y PE+I G
Sbjct: 130 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 186
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 302
+ +D+WS G + E L+G+P F + + I +V EF
Sbjct: 187 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 228
Query: 303 KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
FP + A DL+SRLL+++P+ R
Sbjct: 229 TFPDF------------VTEGARDLISRLLKHNPSQR 253
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 127/277 (45%), Gaps = 50/277 (18%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 123
R +G G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 124 KHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F T + L+LEY P TV+R ++ K ++ Y+ ++ AL+Y
Sbjct: 77 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 127
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ V HRDIKP+NLL+ +LK+ DFG + V + + Y PE+I G
Sbjct: 128 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 184
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 302
+ +D+WS G + E L+G+P F + + I +V EF
Sbjct: 185 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 226
Query: 303 KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
FP + A DL+SRLL+++P+ R
Sbjct: 227 TFPDF------------VTEGARDLISRLLKHNPSQR 251
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 110/227 (48%), Gaps = 25/227 (11%)
Query: 56 GKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN--------R 107
G + QP +Y + +G G+F V A+ + TG VAIK + DK N R
Sbjct: 4 GSDEQP-HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKII--DKTQLNPTSLQKLFR 60
Query: 108 ELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPL 165
E++ M++L+HPN+V L F E ++ L L++EY E ++ H RM
Sbjct: 61 EVRIMKILNHPNIVKL----FEVIETEKT-LYLIMEYASGGEVFDYLVAHG-----RMKE 110
Query: 166 IYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI 225
+ F QI A+ Y H + HRD+K +NLL++ + +K+ DFG + G
Sbjct: 111 KEARSKFRQIVSAVQYCHQK-RIVHRDLKAENLLLDADMN-IKIADFGFSNEFTVGGKLD 168
Query: 226 SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGES 272
++ S Y APEL G +D+WS G +L L+ G F G++
Sbjct: 169 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 215
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 127/277 (45%), Gaps = 50/277 (18%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 123
R +G G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 40 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 99
Query: 124 KHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F T + L+LEY P TV+R ++ K ++ Y+ ++ AL+Y
Sbjct: 100 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 150
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ V HRDIKP+NLL+ +LK+ DFG + V + + Y PE+I G
Sbjct: 151 HSK-RVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 207
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 302
+ +D+WS G + E L+G+P F + + I +V EF
Sbjct: 208 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 249
Query: 303 KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
FP + A DL+SRLL+++P+ R
Sbjct: 250 TFPDF------------VTEGARDLISRLLKHNPSQR 274
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 111/227 (48%), Gaps = 23/227 (10%)
Query: 55 GGKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN-------- 106
G K+ + Y+ +G G+FG V + TG VA+K +L ++ ++
Sbjct: 1 GSKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVK-ILNRQKIRSLDVVGKIK 59
Query: 107 RELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMP 164
RE+Q ++L HP+++ L + T+ +V+EYV E + KH R+
Sbjct: 60 REIQNLKLFRHPHIIKLYQVISTPTD-----FFMVMEYVSGGELFDYICKH-----GRVE 109
Query: 165 LIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN 224
+ + F QI A+ Y H + V HRD+KP+N+L++ H + K+ DFG + ++ GE
Sbjct: 110 EMEARRLFQQILSAVDYCHRHM-VVHRDLKPENVLLDAHMNA-KIADFGLSNMMSDGEFL 167
Query: 225 ISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGE 271
+ S Y APE+I G +DIWS G +L LL G F E
Sbjct: 168 RTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE 214
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 127/277 (45%), Gaps = 50/277 (18%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 123
R +G G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 124 KHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F T + L+LEY P TV+R ++ K ++ Y+ ++ AL+Y
Sbjct: 77 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 127
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ V HRDIKP+NLL+ +LK+ DFG + V + + Y PE+I G
Sbjct: 128 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 184
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 302
+ +D+WS G + E L+G+P F + + I +V EF
Sbjct: 185 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 226
Query: 303 KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
FP + A DL+SRLL+++P+ R
Sbjct: 227 TFPDF------------VTEGARDLISRLLKHNPSQR 251
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 127/277 (45%), Gaps = 50/277 (18%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 123
R +G G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 18 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 124 KHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F T + L+LEY P TV+R ++ K ++ Y+ ++ AL+Y
Sbjct: 78 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 128
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ V HRDIKP+NLL+ +LK+ DFG + V + + Y PE+I G
Sbjct: 129 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 185
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 302
+ +D+WS G + E L+G+P F + + I +V EF
Sbjct: 186 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 227
Query: 303 KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
FP + A DL+SRLL+++P+ R
Sbjct: 228 TFPDF------------VTEGARDLISRLLKHNPSQR 252
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 127/277 (45%), Gaps = 50/277 (18%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 123
R +G G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 124 KHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F T + L+LEY P TV+R ++ K ++ Y+ ++ AL+Y
Sbjct: 74 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 124
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ V HRDIKP+NLL+ +LK+ DFG + V + + Y PE+I G
Sbjct: 125 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 181
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 302
+ +D+WS G + E L+G+P F + + I +V EF
Sbjct: 182 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 223
Query: 303 KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
FP + A DL+SRLL+++P+ R
Sbjct: 224 TFPDF------------VTEGARDLISRLLKHNPSQR 248
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 127/277 (45%), Gaps = 50/277 (18%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 123
R +G G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 124 KHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F T + L+LEY P TV+R ++ K ++ Y+ ++ AL+Y
Sbjct: 77 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 127
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ V HRDIKP+NLL+ +LK+ DFG + V + + Y PE+I G
Sbjct: 128 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRAALCGTLDYLPPEMIEGR 184
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 302
+ +D+WS G + E L+G+P F + + I +V EF
Sbjct: 185 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 226
Query: 303 KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
FP + A DL+SRLL+++P+ R
Sbjct: 227 TFPDF------------VTEGARDLISRLLKHNPSQR 251
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 107/217 (49%), Gaps = 24/217 (11%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN--------RELQTMRLLDH 117
+Y + +G G+F V A+ + TG+ VA++ + DK N RE++ M++L+H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRII--DKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 118 PNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQI 175
PN+V L F E ++ L LV+EY E ++ H RM + F QI
Sbjct: 73 PNIVKL----FEVIETEKT-LYLVMEYASGGEVFDYLVAHG-----RMKEKEARAKFRQI 122
Query: 176 CRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRA 235
A+ Y H + HRD+K +NLL++ + +K+ DFG + G ++ S Y A
Sbjct: 123 VSAVQYCHQKF-IVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDTFCGSPPYAA 180
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGES 272
PEL G +D+WS G +L L+ G F G++
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 129/304 (42%), Gaps = 59/304 (19%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNR-----------------E 108
SY R +G G++G V K AIK + + + K R E
Sbjct: 37 SYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNE 96
Query: 109 LQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLI 166
+ ++ LDHPN++ L F +D+ Y LV E+ E ++I H K +
Sbjct: 97 ISLLKSLDHPNIIKLFDVF-----EDKKYFYLVTEFYEGGELFEQIINRH-KFDECDAAN 150
Query: 167 YVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTH--QLKLCDFGSAKVLVKGEPN 224
+K QI + Y+H + HRDIKP+N+L+ +K+ DFG + K
Sbjct: 151 IMK----QILSGICYLHKH-NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKL 205
Query: 225 ISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVL 284
+ + YY APE++ +Y D+WS G ++ LL G P F G++ D + ++ K
Sbjct: 206 RDRLGTAYYIAPEVL--KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEK-- 261
Query: 285 GTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFD 344
Y +F + W K + EA +L+ +L Y N R TA +
Sbjct: 262 -----------GKYYFDF-------NDW-----KNISDEAKELIKLMLTYDYNKRCTAEE 298
Query: 345 AVGS 348
A+ S
Sbjct: 299 ALNS 302
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 127/277 (45%), Gaps = 50/277 (18%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 123
R +G G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 13 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 72
Query: 124 KHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F T + L+LEY P TV+R ++ K ++ Y+ ++ AL+Y
Sbjct: 73 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 123
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ V HRDIKP+NLL+ +LK+ DFG + V + + Y PE+I G
Sbjct: 124 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 180
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 302
+ +D+WS G + E L+G+P F + + I +V EF
Sbjct: 181 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 222
Query: 303 KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
FP + A DL+SRLL+++P+ R
Sbjct: 223 TFPDF------------VTEGARDLISRLLKHNPSQR 247
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 107/217 (49%), Gaps = 24/217 (11%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN--------RELQTMRLLDH 117
+Y + +G G+F V A+ + TG+ VA+K + DK N RE++ M++L+H
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIMKVLNH 65
Query: 118 PNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQI 175
PN+V L F E ++ L LV+EY E ++ H + + + F QI
Sbjct: 66 PNIVKL----FEVIETEKT-LYLVMEYASGGEVFDYLVAHGWMKEKE-----ARAKFRQI 115
Query: 176 CRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRA 235
A+ Y H + HRD+K +NLL++ + +K+ DFG + G ++ S Y A
Sbjct: 116 VSAVQYCHQKF-IVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDTFCGSPPYAA 173
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGES 272
PEL G +D+WS G +L L+ G F G++
Sbjct: 174 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 210
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 23/227 (10%)
Query: 55 GGKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN-------- 106
G K+ + Y+ +G G+FG V + TG VA+K +L ++ ++
Sbjct: 1 GSKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVK-ILNRQKIRSLDVVGKIK 59
Query: 107 RELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMP 164
RE+Q ++L HP+++ L + T+ +V+EYV E + KH R+
Sbjct: 60 REIQNLKLFRHPHIIKLYQVISTPTD-----FFMVMEYVSGGELFDYICKH-----GRVE 109
Query: 165 LIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN 224
+ + F QI A+ Y H + V HRD+KP+N+L++ H + K+ DFG + ++ GE
Sbjct: 110 EMEARRLFQQILSAVDYCHRHM-VVHRDLKPENVLLDAHMNA-KIADFGLSNMMSDGEFL 167
Query: 225 ISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGE 271
S Y APE+I G +DIWS G +L LL G F E
Sbjct: 168 RDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE 214
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 126/277 (45%), Gaps = 50/277 (18%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 123
R +G G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 124 KHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F T + L+LEY P TV+R ++ K ++ Y+ ++ AL+Y
Sbjct: 79 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 129
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ V HRDIKP+NLL+ +LK+ DFG + V + Y PE+I G
Sbjct: 130 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGR 186
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 302
+ +D+WS G + E L+G+P F + + I +V EF
Sbjct: 187 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 228
Query: 303 KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
FP + A DL+SRLL+++P+ R
Sbjct: 229 TFPDF------------VTEGARDLISRLLKHNPSQR 253
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 126/277 (45%), Gaps = 50/277 (18%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 123
R +G G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 124 KHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F T + L+LEY P TV+R ++ K ++ Y+ ++ AL+Y
Sbjct: 75 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 125
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ V HRDIKP+NLL+ +LK+ DFG + V + Y PE+I G
Sbjct: 126 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGR 182
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 302
+ +D+WS G + E L+G+P F + + I +V EF
Sbjct: 183 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 224
Query: 303 KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
FP + A DL+SRLL+++P+ R
Sbjct: 225 TFPDF------------VTEGARDLISRLLKHNPSQR 249
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 127/277 (45%), Gaps = 50/277 (18%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 123
R +G G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 124 KHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F T + L+LEY P TV+R ++ K ++ Y+ ++ AL+Y
Sbjct: 74 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 124
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ V HRDIKP+NLL+ +LK+ DFG + V + + Y PE+I G
Sbjct: 125 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRAALCGTLDYLPPEMIEGR 181
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 302
+ +D+WS G + E L+G+P F + + I +V EF
Sbjct: 182 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 223
Query: 303 KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
FP + A DL+SRLL+++P+ R
Sbjct: 224 TFPDF------------VTEGARDLISRLLKHNPSQR 248
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 126/277 (45%), Gaps = 50/277 (18%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 123
R +G G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 124 KHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F T + L+LEY P TV+R ++ K ++ Y+ ++ AL+Y
Sbjct: 74 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 124
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ V HRDIKP+NLL+ +LK+ DFG + V + Y PE+I G
Sbjct: 125 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGR 181
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 302
+ +D+WS G + E L+G+P F + + I +V EF
Sbjct: 182 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 223
Query: 303 KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
FP + A DL+SRLL+++P+ R
Sbjct: 224 TFPDF------------VTEGARDLISRLLKHNPSQR 248
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 107/217 (49%), Gaps = 24/217 (11%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN--------RELQTMRLLDH 117
+Y + +G G+F V A+ + TG+ VA+K + DK N RE++ M++L+H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 118 PNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQI 175
PN+V L F E ++ L LV+EY E ++ H RM + F QI
Sbjct: 73 PNIVKL----FEVIETEKT-LYLVMEYASGGEVFDYLVAHG-----RMKEKEARAKFRQI 122
Query: 176 CRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRA 235
A+ Y H + HRD+K +NLL++ + +K+ DFG + G ++ + Y A
Sbjct: 123 VSAVQYCHQKF-IVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDAFCGAPPYAA 180
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGES 272
PEL G +D+WS G +L L+ G F G++
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 140/297 (47%), Gaps = 52/297 (17%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-------------NRELQTMR 113
Y+ + +G G+ G V A +T + VAI+ ++ +++ E++ ++
Sbjct: 151 YIMSKTLGSGACGEVKLAFERKTCKKVAIR-IISKRKFAIGSAREADPALNVETEIEILK 209
Query: 114 LLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFY 173
L+HP ++ +K+ F + ++ Y+ L L E +V+ + +R+ KLYFY
Sbjct: 210 KLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVVGN-----KRLKEATCKLYFY 260
Query: 174 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISYICSR 231
Q+ A+ Y+H G+ HRD+KP+N+L++ +K+ DFG +K+L + + +
Sbjct: 261 QMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 319
Query: 232 YYRAPELIF--GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 289
Y APE++ G Y A+D WS G +L L G P F L +
Sbjct: 320 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL-----------K 368
Query: 290 EEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
++I N+ P++ W ++ +K A+DLV +LL P R T +A+
Sbjct: 369 DQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEAL 412
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 126/277 (45%), Gaps = 50/277 (18%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 123
R +G G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 124 KHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F T + L+LEY P TV+R ++ K ++ Y+ ++ AL+Y
Sbjct: 74 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 124
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ V HRDIKP+NLL+ +LK+ DFG + V + Y PE+I G
Sbjct: 125 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGR 181
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 302
+ +D+WS G + E L+G+P F + + I +V EF
Sbjct: 182 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 223
Query: 303 KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
FP + A DL+SRLL+++P+ R
Sbjct: 224 TFPDF------------VTEGARDLISRLLKHNPSQR 248
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 140/297 (47%), Gaps = 52/297 (17%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-------------NRELQTMR 113
Y+ + +G G+ G V A +T + VAI+ ++ +++ E++ ++
Sbjct: 137 YIMSKTLGSGACGEVKLAFERKTCKKVAIR-IISKRKFAIGSAREADPALNVETEIEILK 195
Query: 114 LLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFY 173
L+HP ++ +K+ F + ++ Y+ L L E +V+ + +R+ KLYFY
Sbjct: 196 KLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVVGN-----KRLKEATCKLYFY 246
Query: 174 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISYICSR 231
Q+ A+ Y+H G+ HRD+KP+N+L++ +K+ DFG +K+L + + +
Sbjct: 247 QMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 305
Query: 232 YYRAPELIF--GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 289
Y APE++ G Y A+D WS G +L L G P F L +
Sbjct: 306 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL-----------K 354
Query: 290 EEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
++I N+ P++ W ++ +K A+DLV +LL P R T +A+
Sbjct: 355 DQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEAL 398
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 106/217 (48%), Gaps = 24/217 (11%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN--------RELQTMRLLDH 117
+Y + +G G+F V A+ + TG+ VA++ + DK N RE++ M++L+H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRII--DKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 118 PNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQI 175
PN+V L F E ++ L LV+EY E ++ H RM + F QI
Sbjct: 73 PNIVKL----FEVIETEKT-LYLVMEYASGGEVFDYLVAHG-----RMKEKEARAKFRQI 122
Query: 176 CRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRA 235
A+ Y H + HRD+K +NLL++ + +K+ DFG + G + S Y A
Sbjct: 123 VSAVQYCHQKF-IVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDEFCGSPPYAA 180
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGES 272
PEL G +D+WS G +L L+ G F G++
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 126/277 (45%), Gaps = 50/277 (18%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 123
R +G G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 124 KHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F T + L+LEY P TV+R ++ K ++ Y+ ++ AL+Y
Sbjct: 74 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 124
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ V HRDIKP+NLL+ +LK+ DFG + V + Y PE+I G
Sbjct: 125 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTELCGTLDYLPPEMIEGR 181
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 302
+ +D+WS G + E L+G+P F + + I +V EF
Sbjct: 182 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 223
Query: 303 KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
FP + A DL+SRLL+++P+ R
Sbjct: 224 TFPDF------------VTEGARDLISRLLKHNPSQR 248
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 127/277 (45%), Gaps = 50/277 (18%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 123
R +G G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 124 KHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F T + L+LEY P TV+R ++ K ++ Y+ ++ AL+Y
Sbjct: 75 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 125
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ V HRDIKP+NLL+ +LK+ DFG + V + + Y PE+I G
Sbjct: 126 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRDTLCGTLDYLPPEMIEGR 182
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 302
+ +D+WS G + E L+G+P F + + I +V EF
Sbjct: 183 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 224
Query: 303 KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
FP + A DL+SRLL+++P+ R
Sbjct: 225 TFPDF------------VTEGARDLISRLLKHNPSQR 249
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 126/277 (45%), Gaps = 50/277 (18%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 123
R +G G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 124 KHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F T + L+LEY P TV+R ++ K ++ Y+ ++ AL+Y
Sbjct: 74 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 124
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ V HRDIKP+NLL+ +LK+ DFG + V + Y PE+I G
Sbjct: 125 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTXLCGTLDYLPPEMIEGR 181
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 302
+ +D+WS G + E L+G+P F + + I +V EF
Sbjct: 182 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 223
Query: 303 KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
FP + A DL+SRLL+++P+ R
Sbjct: 224 TFPDF------------VTEGARDLISRLLKHNPSQR 248
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 126/277 (45%), Gaps = 50/277 (18%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 123
R +G G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 124 KHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F T + L+LEY P TV+R ++ K ++ Y+ ++ AL+Y
Sbjct: 79 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 129
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ V HRDIKP+NLL+ +LK+ DFG + V + + Y PE I G
Sbjct: 130 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEXIEGR 186
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 302
+ +D+WS G + E L+G+P F + + I +V EF
Sbjct: 187 X-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 228
Query: 303 KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
FP + A DL+SRLL+++P+ R
Sbjct: 229 TFPDF------------VTEGARDLISRLLKHNPSQR 253
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 126/277 (45%), Gaps = 50/277 (18%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 123
R +G G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 40 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 99
Query: 124 KHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F T + L+LEY P TV+R ++ K ++ Y+ ++ AL+Y
Sbjct: 100 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 150
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ V HRDIKP+NLL+ +LK+ DFG + V + Y PE+I G
Sbjct: 151 HSK-RVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRDDLCGTLDYLPPEMIEGR 207
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 302
+ +D+WS G + E L+G+P F + + I +V EF
Sbjct: 208 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 249
Query: 303 KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
FP + A DL+SRLL+++P+ R
Sbjct: 250 TFPDF------------VTEGARDLISRLLKHNPSQR 274
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 126/277 (45%), Gaps = 50/277 (18%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 123
R +G G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 16 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 75
Query: 124 KHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F T + L+LEY P TV+R ++ K ++ Y+ ++ AL+Y
Sbjct: 76 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 126
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ V HRDIKP+NLL+ +LK+ DFG + V + Y PE+I G
Sbjct: 127 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRXXLCGTLDYLPPEMIEGR 183
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 302
+ +D+WS G + E L+G+P F + + I +V EF
Sbjct: 184 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 225
Query: 303 KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
FP + A DL+SRLL+++P+ R
Sbjct: 226 TFPDF------------VTEGARDLISRLLKHNPSQR 250
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 135/286 (47%), Gaps = 46/286 (16%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDK-----RYKNRELQTMRLLDHPNVV 121
++ +R +G G+FG V + +G IK + +D+ E++ ++ LDHPN++
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRAL 179
+ F +D + +V+E E + R++ + + + YV Q+ AL
Sbjct: 84 KIFEVF-----EDYHNMYIVMETCEGGELLERIVSAQAR-GKALSEGYVAELMKQMMNAL 137
Query: 180 AYIHNTIGVCHRDIKPQNLL---VNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAP 236
AY H+ V H+D+KP+N+L +PH+ +K+ DFG A++ E + + + Y AP
Sbjct: 138 AYFHSQ-HVVHKDLKPENILFQDTSPHS-PIKIIDFGLAELFKSDEHSTNAAGTALYMAP 195
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 296
E+ + T DIWSAG V+ LL G F G S L E+ +++
Sbjct: 196 EVF--KRDVTFKCDIWSAGVVMYFLLTGCLPFTGTS----LEEV--------QQKATYKE 241
Query: 297 PNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTA 342
PNY ++ P + P+AVDL+ ++L P R +A
Sbjct: 242 PNYA------VECRP--------LTPQAVDLLKQMLTKDPERRPSA 273
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 126/277 (45%), Gaps = 50/277 (18%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 123
R +G G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 124 KHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F T + L+LEY P TV+R ++ K ++ Y+ ++ AL+Y
Sbjct: 77 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 127
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ V HRDIKP+NLL+ +LK+ DFG + V + Y PE+I G
Sbjct: 128 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRXXLCGTLDYLPPEMIEGR 184
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 302
+ +D+WS G + E L+G+P F + + I +V EF
Sbjct: 185 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 226
Query: 303 KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
FP + A DL+SRLL+++P+ R
Sbjct: 227 TFPDF------------VTEGARDLISRLLKHNPSQR 251
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 126/277 (45%), Gaps = 50/277 (18%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 123
R +G G FG V+ A+ + +A+K + + + K RE++ L HPN++ L
Sbjct: 11 RPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 70
Query: 124 KHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F T + L+LEY P TV+R ++ K ++ Y+ ++ AL+Y
Sbjct: 71 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 121
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ V HRDIKP+NLL+ +LK+ DFG + V + + Y PE+I G
Sbjct: 122 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 178
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 302
+ +D+WS G + E L+G+P F + + I +V EF
Sbjct: 179 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 220
Query: 303 KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
FP + A DL+SRLL+++P+ R
Sbjct: 221 TFPDF------------VTEGARDLISRLLKHNPSQR 245
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 126/277 (45%), Gaps = 50/277 (18%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 123
R +G G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 124 KHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F T + L+LEY P TV+R ++ K ++ Y+ ++ AL+Y
Sbjct: 74 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 124
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ V HRDIKP+NLL+ +LK+ DFG + V + Y PE+I G
Sbjct: 125 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRXXLCGTLDYLPPEMIEGR 181
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 302
+ +D+WS G + E L+G+P F + + I +V EF
Sbjct: 182 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 223
Query: 303 KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
FP + A DL+SRLL+++P+ R
Sbjct: 224 TFPDF------------VTEGARDLISRLLKHNPSQR 248
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 128/284 (45%), Gaps = 64/284 (22%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 123
R +G G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 124 KHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F T + L+LEY P TV+R ++ K ++ Y+ ++ AL+Y
Sbjct: 75 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 125
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFG-------SAKVLVKGEPNISYICSRYYRA 235
H+ V HRDIKP+NLL+ +LK+ DFG S + + G + Y
Sbjct: 126 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWSCHAPSSRRTTLSGTLD--------YLP 175
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM 295
PE+I G + +D+WS G + E L+G+P F + + I +V
Sbjct: 176 PEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV------------ 222
Query: 296 NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
EF FP + A DL+SRLL+++P+ R
Sbjct: 223 -----EFTFPDF------------VTEGARDLISRLLKHNPSQR 249
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 126/277 (45%), Gaps = 50/277 (18%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 123
R +G G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 124 KHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F T + L+LEY P TV+R ++ K ++ Y+ ++ AL+Y
Sbjct: 77 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 127
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ V HRDIKP+NLL+ +LK+ DFG + V + Y PE+I G
Sbjct: 128 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRDDLCGTLDYLPPEMIEGR 184
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 302
+ +D+WS G + E L+G+P F + + I +V EF
Sbjct: 185 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 226
Query: 303 KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
FP + A DL+SRLL+++P+ R
Sbjct: 227 TFPDF------------VTEGARDLISRLLKHNPSQR 251
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 107/212 (50%), Gaps = 18/212 (8%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN-------RELQTMRLLDHPN 119
Y+ +G GSFG V A +T + VA+K + + K+ RE+ ++LL HP+
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 120 VVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRAL 179
++ L + T+ + +V+EY + I +M++ + +F QI A+
Sbjct: 71 IIKLYDVITTPTD-----IVMVIEYAGGELFDYIVEKKRMTEDEG----RRFFQQIICAI 121
Query: 180 AYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 239
Y H + HRD+KP+NLL++ + + +K+ DFG + ++ G + S Y APE+I
Sbjct: 122 EYCHRH-KIVHRDLKPENLLLDDNLN-VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI 179
Query: 240 FGATEYTAAIDIWSAGCVLAELLLGQPLFPGE 271
G +D+WS G VL +L+G+ F E
Sbjct: 180 NGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDE 211
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 127/277 (45%), Gaps = 50/277 (18%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 123
R +G G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 16 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 75
Query: 124 KHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F T + L+LEY P TV+R ++ K ++ Y+ ++ AL+Y
Sbjct: 76 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 126
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ V HRDIKP+NLL+ +LK+ +FG + V + + Y PE+I G
Sbjct: 127 HSK-RVIHRDIKPENLLLGS-AGELKIANFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 183
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 302
+ +D+WS G + E L+G+P F + + I +V EF
Sbjct: 184 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 225
Query: 303 KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
FP + A DL+SRLL+++P+ R
Sbjct: 226 TFPDF------------VTEGARDLISRLLKHNPSQR 250
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 106/217 (48%), Gaps = 24/217 (11%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN--------RELQTMRLLDH 117
+Y + +G G+F V A+ + TG VAIK + DK N RE++ M++L+H
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKII--DKTQLNPTSLQKLFREVRIMKILNH 73
Query: 118 PNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQI 175
PN+V L F E ++ L L++EY E ++ H RM + F QI
Sbjct: 74 PNIVKL----FEVIETEKT-LYLIMEYASGGEVFDYLVAHG-----RMKEKEARSKFRQI 123
Query: 176 CRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRA 235
A+ Y H + HRD+K +NLL++ + +K+ DFG + G ++ + Y A
Sbjct: 124 VSAVQYCHQK-RIVHRDLKAENLLLDADMN-IKIADFGFSNEFTVGGKLDAFCGAPPYAA 181
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGES 272
PEL G +D+WS G +L L+ G F G++
Sbjct: 182 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 127/277 (45%), Gaps = 50/277 (18%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 123
R +G G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 124 KHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F T + L+LEY P TV+R ++ K ++ Y+ ++ AL+Y
Sbjct: 77 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 127
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ V HRDIKP+NLL+ +LK+ +FG + V + + Y PE+I G
Sbjct: 128 HSK-RVIHRDIKPENLLLGS-AGELKIANFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 184
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 302
+ +D+WS G + E L+G+P F + + I +V EF
Sbjct: 185 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 226
Query: 303 KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
FP + A DL+SRLL+++P+ R
Sbjct: 227 TFPDF------------VTEGARDLISRLLKHNPSQR 251
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 126/277 (45%), Gaps = 50/277 (18%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 123
R +G G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 124 KHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F T + L+LEY P V++ ++ K ++ Y+ ++ AL+Y
Sbjct: 79 YGYFHDATR-----VYLILEYAPRGEVYKELQKLSKFDEQRTATYIT----ELANALSYC 129
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ V HRDIKP+NLL+ +LK+ DFG + V + + Y PE+I G
Sbjct: 130 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 186
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 302
+ +D+WS G + E L+G+P F + + I +V EF
Sbjct: 187 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 228
Query: 303 KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
FP + A DL+SRLL+++P+ R
Sbjct: 229 TFPDF------------VTEGARDLISRLLKHNPSQR 253
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 114/214 (53%), Gaps = 25/214 (11%)
Query: 70 ERV--VGHGSFGVVFQAKCLETGEAVA-------IKKVLQDKRYKNRELQTMRLLDHPNV 120
ER+ +G G+ GVV + + +G +A IK ++++ RELQ + + P +
Sbjct: 19 ERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQII--RELQVLHECNSPYI 76
Query: 121 VSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRAL 179
V F+S E +++ +E++ ++ +V+K ++R+P + + R L
Sbjct: 77 VGFYGAFYSDGE-----ISICMEHMDGGSLDQVLKE----AKRIPEEILGKVSIAVLRGL 127
Query: 180 AYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 239
AY+ + HRD+KP N+LVN ++KLCDFG + L+ N S++ +R Y APE +
Sbjct: 128 AYLREKHQIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSMAN-SFVGTRSYMAPERL 185
Query: 240 FGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGES 272
G T Y+ DIWS G L EL +G+ P+ P ++
Sbjct: 186 QG-THYSVQSDIWSMGLSLVELAVGRYPIPPPDA 218
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 114/220 (51%), Gaps = 26/220 (11%)
Query: 61 PKQTISYMAE----RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--REL 109
P Q +++ + + +G GSFG V K +ETG A+K KV++ K+ ++ E
Sbjct: 33 PAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 110 QTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVK 169
+ ++ ++ P +V L+ F KD L +V+EYVP + H + R + +
Sbjct: 93 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGG---EMFSHLRRIGRFSEPHAR 144
Query: 170 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 229
Y QI Y+H ++ + +RD+KP+NLL++ + +K+ DFG AK VKG +C
Sbjct: 145 FYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IKVADFGFAK-RVKGR--TWXLC 199
Query: 230 SR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 268
Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 113/216 (52%), Gaps = 20/216 (9%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQ-TM---RLL----DH 117
++ +++G GSFG VF A+ +T + AIK + +D + +++ TM R+L +H
Sbjct: 18 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH 77
Query: 118 PNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICR 177
P + + C F T E L V+EY+ + +H + + L Y +I
Sbjct: 78 PFLTHM-FCTFQTKEN----LFFVMEYLNGGD---LMYHIQSCHKFDLSRATFYAAEIIL 129
Query: 178 ALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC-SRYYRAP 236
L ++H+ G+ +RD+K N+L++ H +K+ DFG K + G+ + C + Y AP
Sbjct: 130 GLQFLHSK-GIVYRDLKLDNILLDKDGH-IKIADFGMCKENMLGDAKTNXFCGTPDYIAP 187
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGES 272
E++ G +Y ++D WS G +L E+L+GQ F G+
Sbjct: 188 EILLG-QKYNHSVDWWSFGVLLYEMLIGQSPFHGQD 222
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 125/277 (45%), Gaps = 50/277 (18%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 123
R +G G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 124 KHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F T + L+LEY P V++ ++ K ++ Y+ ++ AL+Y
Sbjct: 79 YGYFHDATR-----VYLILEYAPRGEVYKELQKLSKFDEQRTATYIT----ELANALSYC 129
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ V HRDIKP+NLL+ +LK+ DFG + V + Y PE+I G
Sbjct: 130 HSK-RVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRXXLXGTLDYLPPEMIEGR 186
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 302
+ +D+WS G + E L+G+P F + + I +V EF
Sbjct: 187 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 228
Query: 303 KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
FP + A DL+SRLL+++P+ R
Sbjct: 229 TFPDF------------VTEGARDLISRLLKHNPSQR 253
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 127/279 (45%), Gaps = 50/279 (17%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 123
R +G G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 124 KHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F T + L+LEY P TV+R ++ + ++ Y+ ++ AL+Y
Sbjct: 78 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSRFDEQRTATYIT----ELANALSYC 128
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ V HRDIKP+NLL+ + +LK+ DFG + V + + Y PE+I G
Sbjct: 129 HSK-RVIHRDIKPENLLLGSNG-ELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 185
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 302
+ +D+WS G + E L+G P F + + I +V EF
Sbjct: 186 M-HDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRV-----------------EF 227
Query: 303 KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRST 341
FP + A DL+SRLL+++ + R T
Sbjct: 228 TFPDF------------VTEGARDLISRLLKHNASQRLT 254
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 134/293 (45%), Gaps = 46/293 (15%)
Query: 62 KQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN----RELQTMRLLDH 117
++T +M V+G G+F VF K TG+ A+K + + +++ E+ ++ + H
Sbjct: 8 RKTFIFM--EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKH 65
Query: 118 PNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICR 177
N+V+L+ + STT YL + L E R+++ + L+ Q+
Sbjct: 66 ENIVTLEDIYESTTH---YYLVMQLVSGGELFDRILERGVYTEKDASLV-----IQQVLS 117
Query: 178 ALAYIHNTIGVCHRDIKPQNLL-VNPHTH-QLKLCDFGSAKVLVKGEPNISYIC-SRYYR 234
A+ Y+H G+ HRD+KP+NLL + P + ++ + DFG +K+ G +S C + Y
Sbjct: 118 AVKYLHEN-GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG--IMSTACGTPGYV 174
Query: 235 APELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 294
APE + Y+ A+D WS G + LL G P F E+ +L E IK
Sbjct: 175 APE-VLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE-SKLFEKIK------------ 220
Query: 295 MNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAVG 347
Y EF+ P F + A D + LL+ PN R T A+
Sbjct: 221 --EGYYEFESP----------FWDDISESAKDFICHLLEKDPNERYTCEKALS 261
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 112/220 (50%), Gaps = 21/220 (9%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQ-TM---RLL----DHPNVVS 122
RV+G GSFG V A+ ETG+ A+K + +D ++ +++ TM R+L +HP +
Sbjct: 29 RVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQ 88
Query: 123 LKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
L C F T ++ L V+E+V + H + S+R + Y +I AL ++
Sbjct: 89 L-FCCFQTPDR----LFFVMEFVNGG---DLMFHIQKSRRFDEARARFYAAEIISALMFL 140
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKV-LVKGEPNISYICSRYYRAPELIFG 241
H+ G+ +RD+K N+L++ H KL DFG K + G ++ + Y APE I
Sbjct: 141 HDK-GIIYRDLKLDNVLLD-HEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPE-ILQ 197
Query: 242 ATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 281
Y A+D W+ G +L E+L G F E+ D L E I
Sbjct: 198 EMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE-DDLFEAI 236
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 127/279 (45%), Gaps = 50/279 (17%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 123
R +G G FG V+ A+ ++ +A+K + + + K RE++ L HPN++ L
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 124 KHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F T + L+LEY P TV+R ++ + ++ Y+ ++ AL+Y
Sbjct: 78 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSRFDEQRTATYIT----ELANALSYC 128
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H+ V HRDIKP+NLL+ + +LK+ DFG + V + + Y PE+I G
Sbjct: 129 HSK-RVIHRDIKPENLLLGSNG-ELKIADFGWS-VHAPSSRRDTLCGTLDYLPPEMIEGR 185
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 302
+ +D+WS G + E L+G P F + + I +V EF
Sbjct: 186 M-HDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRV-----------------EF 227
Query: 303 KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRST 341
FP + A DL+SRLL+++ + R T
Sbjct: 228 TFPDF------------VTEGARDLISRLLKHNASQRLT 254
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 114/220 (51%), Gaps = 26/220 (11%)
Query: 61 PKQTISYMAE----RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--REL 109
P Q +++ + + +G GSFG V K +ETG A+K KV++ K+ ++ E
Sbjct: 33 PAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 110 QTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVK 169
+ ++ ++ P +V L+ F KD L +V+EY+P + H + R + +
Sbjct: 93 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYMPGG---DMFSHLRRIGRFSEPHAR 144
Query: 170 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 229
Y QI Y+H ++ + +RD+KP+NLL++ + +K+ DFG AK VKG +C
Sbjct: 145 FYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IKVADFGFAK-RVKGR--TWXLC 199
Query: 230 SR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 268
Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 114/220 (51%), Gaps = 26/220 (11%)
Query: 61 PKQTISYMAE----RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--REL 109
P Q +++ + + +G GSFG V K +ETG A+K KV++ K+ ++ E
Sbjct: 33 PAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 110 QTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVK 169
+ ++ ++ P +V L+ F KD L +V+EY+P + H + R + +
Sbjct: 93 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYMPGG---DMFSHLRRIGRFSEPHAR 144
Query: 170 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 229
Y QI Y+H ++ + +RD+KP+NLL++ + +K+ DFG AK VKG +C
Sbjct: 145 FYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IKVADFGFAK-RVKGR--TWXLC 199
Query: 230 SR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 268
Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 124/283 (43%), Gaps = 47/283 (16%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVL----QDKRYKNRELQTMRLLDHPNVVSLKHCFF 128
+G G+FGVV + TG A K V+ DK +E+QTM +L HP +V+L F
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF- 223
Query: 129 STTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTI 186
+D+ + ++ E++ E +V H KMS+ + Y++ Q+C+ L ++H
Sbjct: 224 ----EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMR----QVCKGLCHMHEN- 274
Query: 187 GVCHRDIKPQNLL-VNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG--AT 243
H D+KP+N++ +++LKL DFG L + + + APE+ G
Sbjct: 275 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVG 334
Query: 244 EYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 303
YT D+WS G + LL G F GE+ + L +K + N +
Sbjct: 335 YYT---DMWSVGVLSYILLSGLSPFGGENDDETL------------RNVKSCDWNMDDSA 379
Query: 304 FPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
F I + D + +LL PN R T A+
Sbjct: 380 FSGISE-------------DGKDFIRKLLLADPNTRMTIHQAL 409
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 137/290 (47%), Gaps = 40/290 (13%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--RELQTMRLLDHPNVVSL 123
R +G GSFG V + +T + A+K K ++ +N +ELQ M+ L+HP +V+L
Sbjct: 21 RAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNL 80
Query: 124 KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
+ F +DE + +V++ + + +++H + + VKL+ ++ AL Y+
Sbjct: 81 WYSF-----QDEEDMFMVVDLL---LGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQ 132
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG-- 241
N + HRD+KP N+L++ H H + + DF A +L + + ++ Y APE+
Sbjct: 133 NQ-RIIHRDMKPDNILLDEHGH-VHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRK 190
Query: 242 ATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP--------TREEI- 292
Y+ A+D WS G ELL G+ + S EI+ T ++E +
Sbjct: 191 GAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS-KEIVHTFETTVVTYPSAWSQEMVS 249
Query: 293 ---KCMNPN----YTEF----KFPQIKAHPWHKIFQKRMPPEAVDLVSRL 331
K + PN +++ FP + W +FQKR+ P + RL
Sbjct: 250 LLKKLLEPNPDQRFSQLSDVQNFPYMNDINWDAVFQKRLIPGFIPNKGRL 299
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 140/336 (41%), Gaps = 90/336 (26%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDK----------RYKNRELQTMRLLD 116
Y + +G GS+GVV A +T AIK + ++K R K E++ M+ L
Sbjct: 28 YHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKT-EVRLMKKLH 86
Query: 117 HPNVVSLKHCFFSTTEKDELYLNLVLEYV------------------------------- 145
HPN+ L + +DE Y+ LV+E
Sbjct: 87 HPNIARLYEVY-----EDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICP 141
Query: 146 -PETVHRVIK---HHYKMS----QRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQN 197
PE I H ++ S QR LI QI AL Y+HN G+CHRDIKP+N
Sbjct: 142 CPECNEEAINGSIHGFRESLDFVQREKLI--SNIMRQIFSALHYLHNQ-GICHRDIKPEN 198
Query: 198 LLVNPH-THQLKLCDFGSAKVLVKGEPNISYICSR-----YYRAPELIFGATE-YTAAID 250
L + + + ++KL DFG +K K Y + Y+ APE++ E Y D
Sbjct: 199 FLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCD 258
Query: 251 IWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAH 310
WSAG +L LL+G FPG + D + +++ +++ NPNY
Sbjct: 259 AWSAGVLLHLLLMGAVPFPGVNDADTISQVLN-------KKLCFENPNYN---------- 301
Query: 311 PWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
+ P A DL+S LL + + R A A+
Sbjct: 302 --------VLSPLARDLLSNLLNRNVDERFDAMRAL 329
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 124/283 (43%), Gaps = 47/283 (16%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVL----QDKRYKNRELQTMRLLDHPNVVSLKHCFF 128
+G G+FGVV + TG A K V+ DK +E+QTM +L HP +V+L F
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF- 117
Query: 129 STTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTI 186
+D+ + ++ E++ E +V H KMS+ + Y++ Q+C+ L ++H
Sbjct: 118 ----EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMR----QVCKGLCHMHEN- 168
Query: 187 GVCHRDIKPQNLL-VNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG--AT 243
H D+KP+N++ +++LKL DFG L + + + APE+ G
Sbjct: 169 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVG 228
Query: 244 EYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 303
YT D+WS G + LL G F GE+ + L +K + N +
Sbjct: 229 YYT---DMWSVGVLSYILLSGLSPFGGENDDETL------------RNVKSCDWNMDDSA 273
Query: 304 FPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
F I + D + +LL PN R T A+
Sbjct: 274 FSGISE-------------DGKDFIRKLLLADPNTRMTIHQAL 303
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 113/221 (51%), Gaps = 25/221 (11%)
Query: 59 GQPKQTISYMAERV-VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNR------ELQT 111
G P++ Y+A + +G GS G+V A TG+ VA+KK+ D R + R E+
Sbjct: 41 GDPRE---YLANFIKIGEGSTGIVCIATEKHTGKQVAVKKM--DLRKQQRRELLFNEVVI 95
Query: 112 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 171
MR H NVV + + S DEL++ V+E++ I H +M++ +
Sbjct: 96 MRDYHHDNVVDM---YSSYLVGDELWV--VMEFLEGGALTDIVTHTRMNEEQ----IATV 146
Query: 172 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC-S 230
+ RAL+Y+HN GV HRDIK ++L+ ++KL DFG + K P + +
Sbjct: 147 CLSVLRALSYLHNQ-GVIHRDIKSDSILLTSDG-RIKLSDFGFCAQVSKEVPKRKXLVGT 204
Query: 231 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGE 271
Y+ APE+I Y +DIWS G ++ E++ G+P + E
Sbjct: 205 PYWMAPEVI-SRLPYGTEVDIWSLGIMVIEMIDGEPPYFNE 244
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 124/268 (46%), Gaps = 27/268 (10%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTE 132
+G G++GVV + + + +G+ +A+K++ + N + Q L+D + C F+ T
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRI---RATVNSQEQKRLLMDLDISMRTVDCPFTVTF 115
Query: 133 KDELY----LNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGV 188
L+ + + +E + ++ + K Q +P + I +AL ++H+ + V
Sbjct: 116 YGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 175
Query: 189 CHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELI---FGATEY 245
HRD+KP N+L+N Q+K+CDFG + LV + Y APE I Y
Sbjct: 176 IHRDVKPSNVLIN-ALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGY 234
Query: 246 TAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE-------------EI 292
+ DIWS G + EL + + FP +S ++ +V+ P+ +
Sbjct: 235 SVKSDIWSLGITMIELAILR--FPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTS 292
Query: 293 KCMNPNYTEF-KFPQIKAHPWHKIFQKR 319
+C+ N E +P++ HP+ + + +
Sbjct: 293 QCLKKNSKERPTYPELMQHPFFTLHESK 320
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 116/230 (50%), Gaps = 26/230 (11%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAI--KKVLQDKRYKNRELQTMRL-------LDHPNVV 121
+V+G GSFG VF K + +A + KVL+ K R+ ++ ++HP +V
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIY--VKLYFYQICRAL 179
L + F + E L L+L+++ R ++S+ + VK Y ++ AL
Sbjct: 90 KLHYAF-----QTEGKLYLILDFL-----RGGDLFTRLSKEVMFTEEDVKFYLAELALAL 139
Query: 180 AYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY-YRAPEL 238
++H ++G+ +RD+KP+N+L++ H +KL DFG +K + E C Y APE+
Sbjct: 140 DHLH-SLGIIYRDLKPENILLDEEGH-IKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV 197
Query: 239 IFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKV-LGTP 287
+ +T + D WS G ++ E+L G F G+ + + I+K LG P
Sbjct: 198 V-NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 246
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 111/211 (52%), Gaps = 20/211 (9%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQ-TM---RLL----DHPNVVS 122
+++G GSFG VF A+ +T + AIK + +D + +++ TM R+L +HP +
Sbjct: 24 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 83
Query: 123 LKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
+ C F T E L V+EY+ + +H + + L Y +I L ++
Sbjct: 84 M-FCTFQTKEN----LFFVMEYLNGGD---LMYHIQSCHKFDLSRATFYAAEIILGLQFL 135
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC-SRYYRAPELIFG 241
H+ G+ +RD+K N+L++ H +K+ DFG K + G+ + C + Y APE++ G
Sbjct: 136 HSK-GIVYRDLKLDNILLDKDGH-IKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLG 193
Query: 242 ATEYTAAIDIWSAGCVLAELLLGQPLFPGES 272
+Y ++D WS G +L E+L+GQ F G+
Sbjct: 194 -QKYNHSVDWWSFGVLLYEMLIGQSPFHGQD 223
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 114/219 (52%), Gaps = 24/219 (10%)
Query: 61 PKQTISYMAE----RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--REL 109
P Q +++ + + +G GSFG V K +ETG A+K KV++ K+ ++ E
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 110 QTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVK 169
+ ++ ++ P +V L+ F KD L +V+EYVP + H + R + +
Sbjct: 94 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGG---EMFSHLRRIGRFSEPHAR 145
Query: 170 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 229
Y QI Y+H ++ + +RD+KP+NLL++ + +++ DFG AK VKG +
Sbjct: 146 FYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR-TWTLCG 201
Query: 230 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 268
+ Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 202 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 96/198 (48%), Gaps = 17/198 (8%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK---NRELQTMRLLDHPNVVSLKHCFFS 129
+G G+FGV + ++ E VA+K + + ++ RE+ R L HPN+V K +
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 85
Query: 130 TTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIG 187
T +L +V+EY E R+ + R + +F Q+ ++Y H +
Sbjct: 86 PT-----HLAIVMEYASGGELFERICN-----AGRFSEDEARFFFQQLISGVSYCH-AMQ 134
Query: 188 VCHRDIKPQNLLVNPH-THQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 246
VCHRD+K +N L++ +LK+CDFG +K V S + + Y APE++
Sbjct: 135 VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDG 194
Query: 247 AAIDIWSAGCVLAELLLG 264
D+WS G L +L+G
Sbjct: 195 KVADVWSCGVTLYVMLVG 212
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 96/198 (48%), Gaps = 17/198 (8%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK---NRELQTMRLLDHPNVVSLKHCFFS 129
+G G+FGV + ++ E VA+K + + ++ RE+ R L HPN+V K +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVILT 86
Query: 130 TTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIG 187
T +L +V+EY E R+ + R + +F Q+ ++Y H +
Sbjct: 87 PT-----HLAIVMEYASGGELFERICN-----AGRFSEDEARFFFQQLISGVSYCH-AMQ 135
Query: 188 VCHRDIKPQNLLVNPH-THQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 246
VCHRD+K +N L++ +LK+CDFG +K V S + + Y APE++
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDG 195
Query: 247 AAIDIWSAGCVLAELLLG 264
D+WS G L +L+G
Sbjct: 196 KVADVWSCGVTLYVMLVG 213
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 111/220 (50%), Gaps = 26/220 (11%)
Query: 61 PKQTISYMAE----RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQ------ 110
P Q +++ + + +G GSFG V K +ETG A+K + + K K +E++
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEK 92
Query: 111 -TMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVK 169
++ ++ P +V L+ F KD L +V+EY P + H + R + +
Sbjct: 93 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYAPGG---EMFSHLRRIGRFSEPHAR 144
Query: 170 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 229
Y QI Y+H ++ + +RD+KP+NL+++ + +K+ DFG AK VKG +C
Sbjct: 145 FYAAQIVLTFEYLH-SLDLIYRDLKPENLMIDQQGY-IKVTDFGLAK-RVKGR--TWXLC 199
Query: 230 SR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 268
Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 116/230 (50%), Gaps = 26/230 (11%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAI--KKVLQDKRYKNRELQTMRL-------LDHPNVV 121
+V+G GSFG VF K + +A + KVL+ K R+ ++ ++HP +V
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIY--VKLYFYQICRAL 179
L + F + E L L+L+++ R ++S+ + VK Y ++ AL
Sbjct: 90 KLHYAF-----QTEGKLYLILDFL-----RGGDLFTRLSKEVMFTEEDVKFYLAELALAL 139
Query: 180 AYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY-YRAPEL 238
++H ++G+ +RD+KP+N+L++ H +KL DFG +K + E C Y APE+
Sbjct: 140 DHLH-SLGIIYRDLKPENILLDEEGH-IKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV 197
Query: 239 IFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKV-LGTP 287
+ +T + D WS G ++ E+L G F G+ + + I+K LG P
Sbjct: 198 V-NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 246
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 114/220 (51%), Gaps = 26/220 (11%)
Query: 61 PKQTISYMAE----RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--REL 109
P Q +++ + + +G GSFG V K +ETG A+K KV++ K+ ++ E
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 110 QTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVK 169
+ ++ ++ P +V L+ F KD L +V+EYVP + H + R + +
Sbjct: 94 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGG---EMFSHLRRIGRFSEPHAR 145
Query: 170 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 229
Y QI Y+H ++ + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 146 FYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLC 200
Query: 230 SR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 268
Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 201 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 114/220 (51%), Gaps = 26/220 (11%)
Query: 61 PKQTISYMAE----RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--REL 109
P Q +++ + + +G GSFG V K +ETG A+K KV++ K+ ++ E
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 110 QTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVK 169
+ ++ ++ P +V L+ F KD L +V+EYVP + H + R + +
Sbjct: 93 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGG---EMFSHLRRIGRFSEPHAR 144
Query: 170 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 229
Y QI Y+H ++ + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 145 FYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLC 199
Query: 230 SR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 268
Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 116/230 (50%), Gaps = 26/230 (11%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAI--KKVLQDKRYKNRELQTMRL-------LDHPNVV 121
+V+G GSFG VF K + +A + KVL+ K R+ ++ ++HP +V
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 90
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIY--VKLYFYQICRAL 179
L + F + E L L+L+++ R ++S+ + VK Y ++ AL
Sbjct: 91 KLHYAF-----QTEGKLYLILDFL-----RGGDLFTRLSKEVMFTEEDVKFYLAELALAL 140
Query: 180 AYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY-YRAPEL 238
++H ++G+ +RD+KP+N+L++ H +KL DFG +K + E C Y APE+
Sbjct: 141 DHLH-SLGIIYRDLKPENILLDEEGH-IKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV 198
Query: 239 IFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKV-LGTP 287
+ +T + D WS G ++ E+L G F G+ + + I+K LG P
Sbjct: 199 V-NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 247
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 123/277 (44%), Gaps = 39/277 (14%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK---NRELQTMRLLDHPNVVSLKHCFFS 129
+G G+FGV + T E VA+K + + RE+ R L HPN+V K +
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILT 87
Query: 130 TTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIG 187
T +L +++EY E R+ + R + +F Q+ ++Y H ++
Sbjct: 88 PT-----HLAIIMEYASGGELYERICN-----AGRFSEDEARFFFQQLLSGVSYCH-SMQ 136
Query: 188 VCHRDIKPQNLLVNPH-THQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 246
+CHRD+K +N L++ +LK+CDFG +K V S + + Y APE++ EY
Sbjct: 137 ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLL-RQEYD 195
Query: 247 AAI-DIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGT------PTREEIKC---- 294
I D+WS G L +L+G P E D I ++L R +C
Sbjct: 196 GKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLI 255
Query: 295 -----MNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVD 326
+P T P+IK H W F K +P + ++
Sbjct: 256 SRIFVADPA-TRISIPEIKTHSW---FLKNLPADLMN 288
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 110/212 (51%), Gaps = 23/212 (10%)
Query: 73 VGHGSFGVVFQAKCLETGEAVA-------IKKVLQDKRYKNRELQTMRLLDHPNVVSLKH 125
+G G+ GVVF+ +G +A IK ++++ RELQ + + P +V
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII--RELQVLHECNSPYIVGFYG 71
Query: 126 CFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN 184
F+S E +++ +E++ ++ +V+K + R+P + + + L Y+
Sbjct: 72 AFYSDGE-----ISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 244
+ HRD+KP N+LVN ++KLCDFG + L+ N S++ +R Y +PE + G T
Sbjct: 123 KHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQG-TH 179
Query: 245 YTAAIDIWSAGCVLAELLLGQ-PLFPGESGVD 275
Y+ DIWS G L E+ +G+ P+ P ++ D
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKED 211
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 109/209 (52%), Gaps = 23/209 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVA-------IKKVLQDKRYKNRELQTMRLLDHPNVVSLKH 125
+G G+ GVVF+ +G +A IK ++++ RELQ + + P +V
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII--RELQVLHECNSPYIVGFYG 133
Query: 126 CFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN 184
F+S E +++ +E++ ++ +V+K + R+P + + + L Y+
Sbjct: 134 AFYSDGE-----ISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLRE 184
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 244
+ HRD+KP N+LVN ++KLCDFG + L+ N S++ +R Y +PE + G T
Sbjct: 185 KHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQG-TH 241
Query: 245 YTAAIDIWSAGCVLAELLLGQ-PLFPGES 272
Y+ DIWS G L E+ +G+ P+ P ++
Sbjct: 242 YSVQSDIWSMGLSLVEMAVGRYPIPPPDA 270
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 114/220 (51%), Gaps = 26/220 (11%)
Query: 61 PKQTISYMAE----RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--REL 109
P Q +++ + + +G GSFG V K +ETG A+K KV++ K+ ++ E
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 110 QTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVK 169
+ ++ ++ P +V L+ F KD L +V+EYVP + H + R + +
Sbjct: 93 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGG---EMFSHLRRIGRFSEPHAR 144
Query: 170 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 229
Y QI Y+H ++ + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 145 FYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLC 199
Query: 230 SR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 268
Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 114/220 (51%), Gaps = 26/220 (11%)
Query: 61 PKQTISYMAE----RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--REL 109
P Q +++ + + +G GSFG V K +ETG A+K KV++ K+ ++ E
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 110 QTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVK 169
+ ++ ++ P +V L+ F KD L +V+EYVP + H + R + +
Sbjct: 93 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGG---EMFSHLRRIGRFSEPHAR 144
Query: 170 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 229
Y QI Y+H ++ + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 145 FYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLC 199
Query: 230 SR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 268
Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 136/296 (45%), Gaps = 48/296 (16%)
Query: 62 KQTISYMAERV--VGHGSFGVVF--QAKCLETGEAVAIKKVLQDKRYKN----RELQTMR 113
K +S M +RV +G G++G V + K A+ I + N E+ ++
Sbjct: 32 KGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLK 91
Query: 114 LLDHPNVVSLKHCFFSTTEKDELYLNLVLE-YVPETVHRVIKHHYKMSQRMPLIYVKLYF 172
LLDHPN++ L + FF +D+ LV+E Y + I H K ++ + +K
Sbjct: 92 LLDHPNIMKL-YDFF----EDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIK--- 143
Query: 173 YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISYICS 230
Q+ + Y+H + HRD+KP+NLL+ +K+ DFG + V + + +
Sbjct: 144 -QVLSGVTYLHKH-NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGT 201
Query: 231 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE 290
YY APE++ +Y D+WS G +L LL G P F G++ DQ EI++
Sbjct: 202 AYYIAPEVL--RKKYDEKCDVWSIGVILFILLAGYPPFGGQT--DQ--EILR-------- 247
Query: 291 EIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
K YT F P+ W K + A DL+ ++LQ+ R +A A+
Sbjct: 248 --KVEKGKYT-FDSPE-----W-----KNVSEGAKDLIKQMLQFDSQRRISAQQAL 290
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 110/217 (50%), Gaps = 22/217 (10%)
Query: 73 VGHGSFGVVFQAKCLETGEAVA-------IKKVLQDKRYKNRELQTMRLLDHPNVVSLKH 125
+G G+ GVVF+ +G +A IK ++++ RELQ + + P +V
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII--RELQVLHECNSPYIVGFYG 90
Query: 126 CFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN 184
F+S E +++ +E++ ++ +V+K + R+P + + + L Y+
Sbjct: 91 AFYSDGE-----ISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLRE 141
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 244
+ HRD+KP N+LVN ++KLCDFG + L+ N S++ +R Y +PE + G T
Sbjct: 142 KHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQG-TH 198
Query: 245 YTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 281
Y+ DIWS G L E+ +G+ SG + E++
Sbjct: 199 YSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELL 235
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 114/220 (51%), Gaps = 26/220 (11%)
Query: 61 PKQTISYMAE----RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--REL 109
P Q +++ + + +G GSFG V K ETG A+K KV++ K+ ++ E
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEK 92
Query: 110 QTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVK 169
+ ++ ++ P +V L++ F KD L +V+EYVP + H + R + +
Sbjct: 93 RILQAVNFPFLVKLEYSF-----KDNSNLYMVMEYVPGG---EMFSHLRRIGRFSEPHAR 144
Query: 170 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 229
Y QI Y+H ++ + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 145 FYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLC 199
Query: 230 SR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 268
Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 114/220 (51%), Gaps = 26/220 (11%)
Query: 61 PKQTISYMAE----RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--REL 109
P Q +++ + + +G GSFG V K ETG A+K KV++ K+ ++ E
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEK 92
Query: 110 QTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVK 169
+ ++ ++ P +V L++ F KD L +V+EYVP + H + R + +
Sbjct: 93 RILQAVNFPFLVKLEYSF-----KDNSNLYMVMEYVPGG---EMFSHLRRIGRFSEPHAR 144
Query: 170 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 229
Y QI Y+H ++ + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 145 FYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLC 199
Query: 230 SR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 268
Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 106/211 (50%), Gaps = 29/211 (13%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN--------RELQTMRLLDHP 118
Y+ +G G+FG V K TG VA+K +L ++ ++ RE+Q ++L HP
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVK-ILNRQKIRSLDVVGKIRREIQNLKLFRHP 76
Query: 119 NVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKH---HYKMSQRMPLIYVKLYFY 173
+++ L + ++ + +V+EYV E + K+ K S+R+ F
Sbjct: 77 HIIKLYQVISTPSD-----IFMVMEYVSGGELFDYICKNGRLDEKESRRL--------FQ 123
Query: 174 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYY 233
QI + Y H + V HRD+KP+N+L++ H + K+ DFG + ++ GE S Y
Sbjct: 124 QILSGVDYCHRHM-VVHRDLKPENVLLDAHMNA-KIADFGLSNMMSDGEFLRXSCGSPNY 181
Query: 234 RAPELIFGATEYTAAIDIWSAGCVLAELLLG 264
APE+I G +DIWS+G +L LL G
Sbjct: 182 AAPEVISGRLYAGPEVDIWSSGVILYALLCG 212
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 114/219 (52%), Gaps = 24/219 (10%)
Query: 61 PKQTISYMAE----RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--REL 109
P Q +++ + + +G GSFG V K +ETG A+K KV++ K+ ++ E
Sbjct: 19 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 78
Query: 110 QTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVK 169
+ ++ ++ P +V L+ F KD L +V+EYVP + H + R + +
Sbjct: 79 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGG---EMFSHLRRIGRFSEPHAR 130
Query: 170 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 229
Y QI Y+H ++ + +RD+KP+NLL++ + +++ DFG AK VKG +
Sbjct: 131 FYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR-TWTLCG 186
Query: 230 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 268
+ Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 187 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 224
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 114/220 (51%), Gaps = 26/220 (11%)
Query: 61 PKQTISYMAE----RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--REL 109
P Q +++ + + +G GSFG V K ETG A+K KV++ K+ ++ E
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEK 92
Query: 110 QTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVK 169
+ ++ ++ P +V L++ F KD L +V+EYVP + H + R + +
Sbjct: 93 RILQAVNFPFLVKLEYSF-----KDNSNLYMVMEYVPGG---EMFSHLRRIGRFSEPHAR 144
Query: 170 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 229
Y QI Y+H ++ + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 145 FYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLC 199
Query: 230 SR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 268
Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 107/217 (49%), Gaps = 20/217 (9%)
Query: 61 PKQTISYMAE----RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRE----LQTM 112
P Q +++ + + +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 113 RLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYF 172
R+L N L FS + LY +V+EY P + H + R + + Y
Sbjct: 94 RILQAVNFPFLTKLEFSFKDNSNLY--MVMEYAPGG---EMFSHLRRIGRFSEPHARFYA 148
Query: 173 YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR- 231
QI Y+H ++ + +RD+KP+NL+++ + +K+ DFG AK VKG +C
Sbjct: 149 AQIVLTFEYLH-SLDLIYRDLKPENLMIDQQGY-IKVTDFGFAK-RVKGR--TWXLCGTP 203
Query: 232 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 268
Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 204 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 114/220 (51%), Gaps = 26/220 (11%)
Query: 61 PKQTISYMAE----RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--REL 109
P Q +++ + + +G GSFG V K +ETG A+K KV++ K+ ++ E
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 110 QTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVK 169
+ ++ ++ P +V L+ F KD L +V+EYVP + H + R + +
Sbjct: 94 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGG---EMFSHLRRIGRFXEPHAR 145
Query: 170 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 229
Y QI Y+H ++ + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 146 FYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLC 200
Query: 230 SR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 268
Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 201 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 114/220 (51%), Gaps = 26/220 (11%)
Query: 61 PKQTISYMAE----RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--REL 109
P Q +++ + + +G GSFG V K +ETG A+K KV++ K+ ++ E
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 110 QTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVK 169
+ ++ ++ P +V L+ F KD L +V+EYVP + H + R + +
Sbjct: 93 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGG---EMFSHLRRIGRFXEPHAR 144
Query: 170 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 229
Y QI Y+H ++ + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 145 FYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLC 199
Query: 230 SR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 268
Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 115/242 (47%), Gaps = 39/242 (16%)
Query: 72 VVGHGSFGVVFQAKCLE---TGEAVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFF 128
+G G+FG V + C++ G VA+K V RY +++L+H N F
Sbjct: 21 TLGEGAFGKVVE--CIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFR 78
Query: 129 STTEKDEL----YLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN 184
+ ++ +V E + + + IK + + R+ +++ YQIC+++ ++H+
Sbjct: 79 CVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLD--HIRKMAYQICKSVNFLHS 136
Query: 185 TIGVCHRDIKPQNLL---------------------VNPHTHQLKLCDFGSAKVLVKGEP 223
+ H D+KP+N+L +NP +K+ DFGSA E
Sbjct: 137 N-KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINP---DIKVVDFGSATY--DDEH 190
Query: 224 NISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKV 283
+ + + +R+YRAPE+I A ++ D+WS GC+L E LG +FP + L + ++
Sbjct: 191 HSTLVSTRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERI 249
Query: 284 LG 285
LG
Sbjct: 250 LG 251
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 107/217 (49%), Gaps = 20/217 (9%)
Query: 61 PKQTISYMAE----RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRE----LQTM 112
P Q +++ + + +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 113 RLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYF 172
R+L N L FS + LY +V+EY P + H + R + + Y
Sbjct: 94 RILQAVNFPFLTKLEFSFKDNSNLY--MVMEYAPGG---EMFSHLRRIGRFSEPHARFYA 148
Query: 173 YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR- 231
QI Y+H ++ + +RD+KP+NL+++ + +K+ DFG AK VKG +C
Sbjct: 149 AQIVLTFEYLH-SLDLIYRDLKPENLMIDQQGY-IKVTDFGFAK-RVKGR--TWXLCGTP 203
Query: 232 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 268
Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 204 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 111/220 (50%), Gaps = 26/220 (11%)
Query: 61 PKQTISYMAE----RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--REL 109
P Q +++ + R +G GSFG V K ETG A+K KV++ K+ ++ E
Sbjct: 34 PAQNTAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 110 QTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVK 169
+ + ++ P +V L+ F KD L +VLEY P + H + R + +
Sbjct: 94 RIQQAVNFPFLVKLEFSF-----KDNSNLYMVLEYAPGG---EMFSHLRRIGRFSEPHAR 145
Query: 170 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 229
Y QI Y+H ++ + +RD+KP+NLL++ + +K+ DFG AK VKG +C
Sbjct: 146 FYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IKVADFGFAK-RVKGR--TWXLC 200
Query: 230 SR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 268
Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 201 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 114/220 (51%), Gaps = 26/220 (11%)
Query: 61 PKQTISYMAE----RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--REL 109
P Q +++ + + +G GSFG V K +ETG A+K KV++ K+ ++ E
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 110 QTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVK 169
+ ++ ++ P +V L+ F KD L +V+EYVP + H + R + +
Sbjct: 93 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGG---EMFSHLRRIGRFXEPHAR 144
Query: 170 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 229
Y QI Y+H ++ + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 145 FYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLC 199
Query: 230 SR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 268
Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 127/269 (47%), Gaps = 29/269 (10%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTE 132
+G G++GVV + + + +G+ +A+K++ + N + Q L+D + C F+ T
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRI---RATVNSQEQKRLLMDLDISMRTVDCPFTVTF 71
Query: 133 KDELY----LNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGV 188
L+ + + +E + ++ + K Q +P + I +AL ++H+ + V
Sbjct: 72 YGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 131
Query: 189 CHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKG-EPNISYICSRYYRAPELI---FGATE 244
HRD+KP N+L+N Q+K+CDFG + LV +I C + Y APE I
Sbjct: 132 IHRDVKPSNVLINA-LGQVKMCDFGISGYLVDDVAKDIDAGC-KPYMAPERINPELNQKG 189
Query: 245 YTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE-------------E 291
Y+ DIWS G + EL + + FP +S ++ +V+ P+ +
Sbjct: 190 YSVKSDIWSLGITMIELAILR--FPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFT 247
Query: 292 IKCMNPNYTEF-KFPQIKAHPWHKIFQKR 319
+C+ N E +P++ HP+ + + +
Sbjct: 248 SQCLKKNSKERPTYPELMQHPFFTLHESK 276
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 107/206 (51%), Gaps = 23/206 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVA-------IKKVLQDKRYKNRELQTMRLLDHPNVVSLKH 125
+G G+ GVVF+ +G +A IK ++++ RELQ + + P +V
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII--RELQVLHECNSPYIVGFYG 98
Query: 126 CFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN 184
F+S E +++ +E++ ++ +V+K + R+P + + + L Y+
Sbjct: 99 AFYSDGE-----ISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLRE 149
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 244
+ HRD+KP N+LVN ++KLCDFG + L+ N S++ +R Y +PE + G T
Sbjct: 150 KHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQG-TH 206
Query: 245 YTAAIDIWSAGCVLAELLLGQ-PLFP 269
Y+ DIWS G L E+ +G+ P+ P
Sbjct: 207 YSVQSDIWSMGLSLVEMAVGRYPIPP 232
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 107/217 (49%), Gaps = 20/217 (9%)
Query: 61 PKQTISYMAE----RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRE----LQTM 112
P Q +++ + + +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 113 RLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYF 172
R+L N L FS + LY +V+EY P + H + R + + Y
Sbjct: 94 RILQAVNFPFLTKLEFSFKDNSNLY--MVMEYAPGG---EMFSHLRRIGRFXEPHARFYA 148
Query: 173 YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR- 231
QI Y+H ++ + +RD+KP+NL+++ + +K+ DFG AK VKG +C
Sbjct: 149 AQIVLTFEYLH-SLDLIYRDLKPENLMIDQQGY-IKVTDFGFAK-RVKGR--TWXLCGTP 203
Query: 232 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 268
Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 204 EYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 138/323 (42%), Gaps = 61/323 (18%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLL---------- 115
+ R++G G FG V+ + +TG+ A+K L KR K ++ +T+ L
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMK-CLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 116 -DHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFY- 173
D P +V + + F T +K L+L+ HY +SQ + FY
Sbjct: 249 GDCPFIVCMSYAF-HTPDKLSFILDLM---------NGGDLHYHLSQHGVFSEADMRFYA 298
Query: 174 -QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY 232
+I L ++HN V +RD+KP N+L++ H H +++ D G A K +P+ S + +
Sbjct: 299 AEIILGLEHMHNRF-VVYRDLKPANILLDEHGH-VRISDLGLACDFSKKKPHAS-VGTHG 355
Query: 233 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF-----PGESGVDQLVEIIKV---- 283
Y APE++ Y ++ D +S GC+L +LL G F + +D++ + V
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD 415
Query: 284 -------------LGTPTREEIKCMNPNYTEFK-FPQIKAHPWHKIFQKRMPPEAVDLVS 329
L + C+ E K P ++ W +F ++ PP +
Sbjct: 416 SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLI---- 471
Query: 330 RLLQYSPNLRSTAFDA--VGSFD 350
P A DA +GSFD
Sbjct: 472 -----PPRGEVNAADAFDIGSFD 489
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 138/323 (42%), Gaps = 61/323 (18%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLL---------- 115
+ R++G G FG V+ + +TG+ A+K L KR K ++ +T+ L
Sbjct: 189 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMK-CLDKKRIKMKQGETLALNERIMLSLVST 247
Query: 116 -DHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFY- 173
D P +V + + F T +K L+L+ HY +SQ + FY
Sbjct: 248 GDCPFIVCMSYAF-HTPDKLSFILDLM---------NGGDLHYHLSQHGVFSEADMRFYA 297
Query: 174 -QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY 232
+I L ++HN V +RD+KP N+L++ H H +++ D G A K +P+ S + +
Sbjct: 298 AEIILGLEHMHNRF-VVYRDLKPANILLDEHGH-VRISDLGLACDFSKKKPHAS-VGTHG 354
Query: 233 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF-----PGESGVDQLVEIIKV---- 283
Y APE++ Y ++ D +S GC+L +LL G F + +D++ + V
Sbjct: 355 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD 414
Query: 284 -------------LGTPTREEIKCMNPNYTEFK-FPQIKAHPWHKIFQKRMPPEAVDLVS 329
L + C+ E K P ++ W +F ++ PP +
Sbjct: 415 SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLI---- 470
Query: 330 RLLQYSPNLRSTAFDA--VGSFD 350
P A DA +GSFD
Sbjct: 471 -----PPRGEVNAADAFDIGSFD 488
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 113/220 (51%), Gaps = 26/220 (11%)
Query: 61 PKQTISYMAE----RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--REL 109
P Q +++ + + +G GSFG V K +ETG A+K KV++ K+ ++ E
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 110 QTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVK 169
+ ++ ++ P +V L+ F KD L +V+EY P + H + R + +
Sbjct: 93 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYAPGG---EMFSHLRRIGRFSEPHAR 144
Query: 170 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 229
Y QI Y+H ++ + +RD+KP+NL+++ + +K+ DFG AK VKG +C
Sbjct: 145 FYAAQIVLTFEYLH-SLDLIYRDLKPENLMIDQQGY-IKVTDFGFAK-RVKGR--TWXLC 199
Query: 230 SR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 268
Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 104/210 (49%), Gaps = 27/210 (12%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDK--------RYKNRELQTMRLLDHP 118
Y +G G F V A + TGE VAIK + DK R K E++ ++ L H
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIK--IMDKNTLGSDLPRIKT-EIEALKNLRHQ 68
Query: 119 NVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQIC 176
++ L H + + + +VLEY P E +I R+ ++ F QI
Sbjct: 69 HICQLYHVLETANK-----IFMVLEYCPGGELFDYIIS-----QDRLSEEETRVVFRQIV 118
Query: 177 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFG-SAKVLVKGEPNISYIC-SRYYR 234
A+AY+H+ G HRD+KP+NLL + + H+LKL DFG AK + ++ C S Y
Sbjct: 119 SAVAYVHSQ-GYAHRDLKPENLLFDEY-HKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYA 176
Query: 235 APELIFGATEYTAAIDIWSAGCVLAELLLG 264
APELI G + + D+WS G +L L+ G
Sbjct: 177 APELIQGKSYLGSEADVWSMGILLYVLMCG 206
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 109/209 (52%), Gaps = 23/209 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVA-------IKKVLQDKRYKNRELQTMRLLDHPNVVSLKH 125
+G G+ GVVF+ +G +A IK ++++ RELQ + + P +V
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII--RELQVLHECNSPYIVGFYG 71
Query: 126 CFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN 184
F+S E +++ +E++ ++ +V+K + R+P + + + L Y+
Sbjct: 72 AFYSDGE-----ISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 244
+ HRD+KP N+LVN ++KLCDFG + L+ N S++ +R Y +PE + G T
Sbjct: 123 KHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQG-TH 179
Query: 245 YTAAIDIWSAGCVLAELLLGQ-PLFPGES 272
Y+ DIWS G L E+ +G+ P+ P ++
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDA 208
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 109/209 (52%), Gaps = 23/209 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVA-------IKKVLQDKRYKNRELQTMRLLDHPNVVSLKH 125
+G G+ GVVF+ +G +A IK ++++ RELQ + + P +V
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII--RELQVLHECNSPYIVGFYG 71
Query: 126 CFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN 184
F+S E +++ +E++ ++ +V+K + R+P + + + L Y+
Sbjct: 72 AFYSDGE-----ISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 244
+ HRD+KP N+LVN ++KLCDFG + L+ N S++ +R Y +PE + G T
Sbjct: 123 KHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQG-TH 179
Query: 245 YTAAIDIWSAGCVLAELLLGQ-PLFPGES 272
Y+ DIWS G L E+ +G+ P+ P ++
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDA 208
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 106/205 (51%), Gaps = 28/205 (13%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKV-------LQDKRYKNRELQTMRLLDHPNVVSL 123
R +G GSFG V + G A+K + L+ + N E + ++ HP ++ +
Sbjct: 12 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRM 71
Query: 124 KHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAY 181
F +D + ++++Y+ E + K SQR P K Y ++C AL Y
Sbjct: 72 WGTF-----QDAQQIFMIMDYIEGGELFSLLRK-----SQRFPNPVAKFYAAEVCLALEY 121
Query: 182 IHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY-IC-SRYYRAPELI 239
+H+ + +RD+KP+N+L++ + H +K+ DFG AK + P+++Y +C + Y APE++
Sbjct: 122 LHSK-DIIYRDLKPENILLDKNGH-IKITDFGFAKYV----PDVTYXLCGTPDYIAPEVV 175
Query: 240 FGATEYTAAIDIWSAGCVLAELLLG 264
Y +ID WS G ++ E+L G
Sbjct: 176 -STKPYNKSIDWWSFGILIYEMLAG 199
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 138/323 (42%), Gaps = 61/323 (18%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLL---------- 115
+ R++G G FG V+ + +TG+ A+K L KR K ++ +T+ L
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMK-CLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 116 -DHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFY- 173
D P +V + + F T +K L+L+ HY +SQ + FY
Sbjct: 249 GDCPFIVCMSYAF-HTPDKLSFILDLM---------NGGDLHYHLSQHGVFSEADMRFYA 298
Query: 174 -QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY 232
+I L ++HN V +RD+KP N+L++ H H +++ D G A K +P+ S + +
Sbjct: 299 AEIILGLEHMHNRF-VVYRDLKPANILLDEHGH-VRISDLGLACDFSKKKPHAS-VGTHG 355
Query: 233 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF-----PGESGVDQLVEIIKV---- 283
Y APE++ Y ++ D +S GC+L +LL G F + +D++ + V
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD 415
Query: 284 -------------LGTPTREEIKCMNPNYTEFK-FPQIKAHPWHKIFQKRMPPEAVDLVS 329
L + C+ E K P ++ W +F ++ PP +
Sbjct: 416 SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLI---- 471
Query: 330 RLLQYSPNLRSTAFDA--VGSFD 350
P A DA +GSFD
Sbjct: 472 -----PPRGEVNAADAFDIGSFD 489
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 138/323 (42%), Gaps = 61/323 (18%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLL---------- 115
+ R++G G FG V+ + +TG+ A+K L KR K ++ +T+ L
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMK-CLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 116 -DHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFY- 173
D P +V + + F T +K L+L+ HY +SQ + FY
Sbjct: 249 GDCPFIVCMSYAF-HTPDKLSFILDLM---------NGGDLHYHLSQHGVFSEADMRFYA 298
Query: 174 -QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY 232
+I L ++HN V +RD+KP N+L++ H H +++ D G A K +P+ S + +
Sbjct: 299 AEIILGLEHMHNRF-VVYRDLKPANILLDEHGH-VRISDLGLACDFSKKKPHAS-VGTHG 355
Query: 233 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF-----PGESGVDQLVEIIKV---- 283
Y APE++ Y ++ D +S GC+L +LL G F + +D++ + V
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD 415
Query: 284 -------------LGTPTREEIKCMNPNYTEFK-FPQIKAHPWHKIFQKRMPPEAVDLVS 329
L + C+ E K P ++ W +F ++ PP +
Sbjct: 416 SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLI---- 471
Query: 330 RLLQYSPNLRSTAFDA--VGSFD 350
P A DA +GSFD
Sbjct: 472 -----PPRGEVNAADAFDIGSFD 489
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 105/205 (51%), Gaps = 22/205 (10%)
Query: 73 VGHGSFGVVFQAKCLETGEAVA-------IKKVLQDKRYKNRELQTMRLLDHPNVVSLKH 125
+G G+ GVVF+ +G +A IK ++++ RELQ + + P +V
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII--RELQVLHECNSPYIVGFYG 71
Query: 126 CFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN 184
F+S E +++ +E++ ++ +V+K + R+P + + + L Y+
Sbjct: 72 AFYSDGE-----ISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 244
+ HRD+KP N+LVN ++KLCDFG + L+ N S++ +R Y +PE + G T
Sbjct: 123 KHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQG-TH 179
Query: 245 YTAAIDIWSAGCVLAELLLGQPLFP 269
Y+ DIWS G L E+ +G+ P
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIP 204
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 105/205 (51%), Gaps = 22/205 (10%)
Query: 73 VGHGSFGVVFQAKCLETGEAVA-------IKKVLQDKRYKNRELQTMRLLDHPNVVSLKH 125
+G G+ GVVF+ +G +A IK ++++ RELQ + + P +V
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII--RELQVLHECNSPYIVGFYG 71
Query: 126 CFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN 184
F+S E +++ +E++ ++ +V+K + R+P + + + L Y+
Sbjct: 72 AFYSDGE-----ISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 244
+ HRD+KP N+LVN ++KLCDFG + L+ N S++ +R Y +PE + G T
Sbjct: 123 KHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQG-TH 179
Query: 245 YTAAIDIWSAGCVLAELLLGQPLFP 269
Y+ DIWS G L E+ +G+ P
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIP 204
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 111/220 (50%), Gaps = 26/220 (11%)
Query: 61 PKQTISYMAE----RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQ------ 110
P Q +++ + + +G GSFG V K +ETG A+K + + K K +E++
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEK 92
Query: 111 -TMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVK 169
++ ++ P +V L+ F KD L +V+EY P + H + R + +
Sbjct: 93 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYAPGG---EMFSHLRRIGRFSEPHAR 144
Query: 170 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 229
Y QI Y+H ++ + +RD+KP+NL+++ + +++ DFG AK VKG +C
Sbjct: 145 FYAAQIVLTFEYLH-SLDLIYRDLKPENLMIDQQGY-IQVTDFGLAK-RVKGR--TWXLC 199
Query: 230 SR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 268
Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 119/255 (46%), Gaps = 46/255 (18%)
Query: 53 TIGGKNGQPK-----QTISY-----MAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDK 102
++GG +G+ + QT+ RV+ G F V++A+ + +G A+K++L ++
Sbjct: 6 SLGGASGRDQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE 65
Query: 103 RYKNR----ELQTMRLLD-HPNVVSLKHCFFSTTEKDE-----LYLNLVLEYVPETVHRV 152
KNR E+ M+ L HPN+V C ++ K+E L+ E +
Sbjct: 66 EEKNRAIIQEVCFMKKLSGHPNIVQF--CSAASIGKEESDTGQAEFLLLTELCKGQLVEF 123
Query: 153 IKHHYKMSQRMPLI--YVKLYFYQICRALAYIHNTI-GVCHRDIKPQNLLVNPHTHQLKL 209
+K KM R PL V FYQ CRA+ ++H + HRD+K +NLL++ + +KL
Sbjct: 124 LK---KMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLS-NQGTIKL 179
Query: 210 CDFGSAKVLVKGEPNISYICSR--------------YYRAPELI--FGATEYTAAIDIWS 253
CDFGSA + P+ S+ R YR PE+I + DIW+
Sbjct: 180 CDFGSATT-ISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWA 238
Query: 254 AGCVLAELLLGQPLF 268
GC+L L Q F
Sbjct: 239 LGCILYLLCFRQHPF 253
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 113/220 (51%), Gaps = 26/220 (11%)
Query: 61 PKQTISYMAE----RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--REL 109
P Q +++ + + +G GSFG V K +ETG A+K KV++ K+ ++ E
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 110 QTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVK 169
+ ++ ++ P +V L+ F KD L +V+EY P + H + R + +
Sbjct: 93 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYAPGG---EMFSHLRRIGRFXEPHAR 144
Query: 170 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 229
Y QI Y+H ++ + +RD+KP+NL+++ + +K+ DFG AK VKG +C
Sbjct: 145 FYAAQIVLTFEYLH-SLDLIYRDLKPENLMIDQQGY-IKVTDFGFAK-RVKGR--TWXLC 199
Query: 230 SR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 268
Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 142/317 (44%), Gaps = 59/317 (18%)
Query: 71 RVVGHGSFGVVFQAKCL---ETGEAVAIK--------KVLQDKRYKNRELQTMRLLDHPN 119
RV+G G +G VFQ + + TG+ A+K + +D + E + + HP
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 120 VVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICR 177
+V L + F + + L L+LEY+ E ++ + M Y +I
Sbjct: 83 IVDLIYAFQTGGK-----LYLILEYLSGGELFMQLEREGIFMEDT-----ACFYLAEISM 132
Query: 178 ALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLV-KGEPNISYICSRYYRAP 236
AL ++H G+ +RD+KP+N+++N H +KL DFG K + G ++ + Y AP
Sbjct: 133 ALGHLHQK-GIIYRDLKPENIMLN-HQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAP 190
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKV-------LGTPTR 289
E++ + + A+D WS G ++ ++L G P F GE+ + +I+K L R
Sbjct: 191 EILM-RSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEAR 249
Query: 290 EEIKCMNPNYTEFKF-------PQIKAHP------WHKIFQKRMPPEAVDLVSRLLQYSP 336
+ +K + + +++AHP W ++ +++ P + P
Sbjct: 250 DLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEP----------PFKP 299
Query: 337 NLRSTAFDAVGSFDSSF 353
L+S + V FDS F
Sbjct: 300 LLQSE--EDVSQFDSKF 314
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 128/290 (44%), Gaps = 41/290 (14%)
Query: 53 TIGGKNGQPKQTISYMAERV---------VGHGSFGVVFQAKCLETGEAVAIK----KVL 99
++ +NG+ + AE + +G G+F V A+ TG+ A+K K L
Sbjct: 1 SMARENGESSSSWKKQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKAL 60
Query: 100 QDKRYK-NRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYK 158
+ K E+ +R + H N+V+L+ + S + LYL + L E R+++ +
Sbjct: 61 KGKESSIENEIAVLRKIKHENIVALEDIYESP---NHLYLVMQLVSGGELFDRIVEKGFY 117
Query: 159 MSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKL--CDFGSAK 216
+ + Q+ A+ Y+H +G+ HRD+KP+NLL + K+ DFG +K
Sbjct: 118 TEKDASTL-----IRQVLDAVYYLHR-MGIVHRDLKPENLLYYSQDEESKIMISDFGLSK 171
Query: 217 VLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQ 276
+ KG+ + + Y APE + Y+ A+D WS G + LL G P F E+
Sbjct: 172 MEGKGDVMSTACGTPGYVAPE-VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKL 230
Query: 277 LVEIIKV---LGTPTREEIKC-----------MNPNYTEFKFPQIKAHPW 312
+I+K +P ++I +PN + Q HPW
Sbjct: 231 FEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPN-KRYTCEQAARHPW 279
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 124/290 (42%), Gaps = 48/290 (16%)
Query: 60 QPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQD-------KRYKNRELQTM 112
P+ YM R +G G F ++ ++T E A K V + K + E+
Sbjct: 37 DPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIH 96
Query: 113 RLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYF 172
+ LD+P+VV H FF +D+ ++ +VLE R + +K + + + +
Sbjct: 97 KSLDNPHVVGF-HGFF----EDDDFVYVVLEIC---RRRSLLELHKRRKAVTEPEARYFM 148
Query: 173 YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSA-KVLVKGEPNISYICSR 231
Q + + Y+HN V HRD+K NL +N +K+ DFG A K+ GE + +
Sbjct: 149 RQTIQGVQYLHNN-RVIHRDLKLGNLFLN-DDMDVKIGDFGLATKIEFDGERKKTLCGTP 206
Query: 232 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE 291
Y APE + ++ +DIWS GC+L LL+G+P F E
Sbjct: 207 NYIAPE-VLCKKGHSFEVDIWSLGCILYTLLVGKPPF----------------------E 243
Query: 292 IKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRST 341
C+ Y K + P H + P A L+ R+L P LR +
Sbjct: 244 TSCLKETYIRIKKNEYSV-PRH------INPVASALIRRMLHADPTLRPS 286
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 104/217 (47%), Gaps = 24/217 (11%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN--------RELQTMRLLDH 117
+Y + +G G+F V A+ + TG+ VA+K + DK N RE++ ++L+H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIXKVLNH 72
Query: 118 PNVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQI 175
PN+V L F E ++ L LV EY E ++ H + + F QI
Sbjct: 73 PNIVKL----FEVIETEKT-LYLVXEYASGGEVFDYLVAHGRXKEKE-----ARAKFRQI 122
Query: 176 CRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRA 235
A+ Y H + HRD+K +NLL++ + +K+ DFG + G ++ + Y A
Sbjct: 123 VSAVQYCHQKF-IVHRDLKAENLLLDADXN-IKIADFGFSNEFTFGNKLDAFCGAPPYAA 180
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGES 272
PEL G +D+WS G +L L+ G F G++
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 113/220 (51%), Gaps = 26/220 (11%)
Query: 61 PKQTISYMAE----RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--REL 109
P Q +++ + + +G GSFG V K ETG A+K KV++ K+ ++ E
Sbjct: 54 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 113
Query: 110 QTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVK 169
+ ++ ++ P +V L+ F KD L +V+EYVP + H + R + +
Sbjct: 114 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGG---EMFSHLRRIGRFSEPHAR 165
Query: 170 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 229
Y QI Y+H ++ + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 166 FYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLC 220
Query: 230 SR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 268
Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 221 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 113/220 (51%), Gaps = 26/220 (11%)
Query: 61 PKQTISYMAE----RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--REL 109
P Q +++ + + +G GSFG V K ETG A+K KV++ K+ ++ E
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 110 QTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVK 169
+ ++ ++ P +V L+ F KD L +V+EYVP + H + R + +
Sbjct: 94 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGG---EMFSHLRRIGRFSEPHAR 145
Query: 170 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 229
Y QI Y+H ++ + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 146 FYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLC 200
Query: 230 SR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 268
Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 201 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 139/317 (43%), Gaps = 59/317 (18%)
Query: 71 RVVGHGSFGVVFQAKCL---ETGEAVAIK--------KVLQDKRYKNRELQTMRLLDHPN 119
RV+G G +G VFQ + + TG+ A+K + +D + E + + HP
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 120 VVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICR 177
+V L + F + + L L+LEY+ E ++ + M Y +I
Sbjct: 83 IVDLIYAFQTGGK-----LYLILEYLSGGELFMQLEREGIFMEDT-----ACFYLAEISM 132
Query: 178 ALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY-YRAP 236
AL ++H G+ +RD+KP+N+++N H +KL DFG K + C Y AP
Sbjct: 133 ALGHLHQK-GIIYRDLKPENIMLN-HQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAP 190
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKV-------LGTPTR 289
E++ + + A+D WS G ++ ++L G P F GE+ + +I+K L R
Sbjct: 191 EILM-RSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEAR 249
Query: 290 EEIKCMNPNYTEFKF-------PQIKAHP------WHKIFQKRMPPEAVDLVSRLLQYSP 336
+ +K + + +++AHP W ++ +++ P + P
Sbjct: 250 DLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEP----------PFKP 299
Query: 337 NLRSTAFDAVGSFDSSF 353
L+S + V FDS F
Sbjct: 300 LLQSE--EDVSQFDSKF 314
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 123/290 (42%), Gaps = 48/290 (16%)
Query: 60 QPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQD-------KRYKNRELQTM 112
P+ YM R +G G F ++ ++T E A K V + K + E+
Sbjct: 37 DPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIH 96
Query: 113 RLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYF 172
+ LD+P+VV H FF +D+ ++ +VLE R + +K + + + +
Sbjct: 97 KSLDNPHVVGF-HGFF----EDDDFVYVVLEIC---RRRSLLELHKRRKAVTEPEARYFM 148
Query: 173 YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSA-KVLVKGEPNISYICSR 231
Q + + Y+HN V HRD+K NL +N +K+ DFG A K+ GE +
Sbjct: 149 RQTIQGVQYLHNN-RVIHRDLKLGNLFLN-DDMDVKIGDFGLATKIEFDGERKKDLCGTP 206
Query: 232 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE 291
Y APE + ++ +DIWS GC+L LL+G+P F E
Sbjct: 207 NYIAPE-VLCKKGHSFEVDIWSLGCILYTLLVGKPPF----------------------E 243
Query: 292 IKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRST 341
C+ Y K + P H + P A L+ R+L P LR +
Sbjct: 244 TSCLKETYIRIKKNEYSV-PRH------INPVASALIRRMLHADPTLRPS 286
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 113/220 (51%), Gaps = 26/220 (11%)
Query: 61 PKQTISYMAE----RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--REL 109
P Q +++ + + +G GSFG V K ETG A+K KV++ K+ ++ E
Sbjct: 26 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 85
Query: 110 QTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVK 169
+ ++ ++ P +V L+ F KD L +V+EYVP + H + R + +
Sbjct: 86 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGG---EMFSHLRRIGRFSEPHAR 137
Query: 170 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 229
Y QI Y+H ++ + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 138 FYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLC 192
Query: 230 SR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 268
Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 193 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 114/242 (47%), Gaps = 39/242 (16%)
Query: 72 VVGHGSFGVVFQAKCLE---TGEAVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFF 128
+G G+FG V + C++ G VA+K V RY +++L+H N F
Sbjct: 21 TLGEGAFGKVVE--CIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFR 78
Query: 129 STTEKDEL----YLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN 184
+ ++ +V E + + + IK + + R+ +++ YQIC+++ ++H+
Sbjct: 79 CVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLD--HIRKMAYQICKSVNFLHS 136
Query: 185 TIGVCHRDIKPQNLL---------------------VNPHTHQLKLCDFGSAKVLVKGEP 223
+ H D+KP+N+L +NP +K+ DFGSA E
Sbjct: 137 N-KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINP---DIKVVDFGSATY--DDEH 190
Query: 224 NISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKV 283
+ + + R+YRAPE+I A ++ D+WS GC+L E LG +FP + L + ++
Sbjct: 191 HSTLVXXRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERI 249
Query: 284 LG 285
LG
Sbjct: 250 LG 251
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 113/220 (51%), Gaps = 26/220 (11%)
Query: 61 PKQTISYMAE----RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--REL 109
P Q +++ + + +G GSFG V K ETG A+K KV++ K+ ++ E
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 110 QTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVK 169
+ ++ ++ P +V L+ F KD L +V+EYVP + H + R + +
Sbjct: 94 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGG---EMFSHLRRIGRFSEPHAR 145
Query: 170 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 229
Y QI Y+H ++ + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 146 FYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLC 200
Query: 230 SR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 268
Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 201 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 113/220 (51%), Gaps = 26/220 (11%)
Query: 61 PKQTISYMAE----RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--REL 109
P Q +++ + + +G GSFG V K ETG A+K KV++ K+ ++ E
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 110 QTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVK 169
+ ++ ++ P +V L+ F KD L +V+EYVP + H + R + +
Sbjct: 94 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGG---EMFSHLRRIGRFSEPHAR 145
Query: 170 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 229
Y QI Y+H ++ + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 146 FYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLC 200
Query: 230 SR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 268
Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 201 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 114/234 (48%), Gaps = 27/234 (11%)
Query: 59 GQPKQTISYMAER-----VVGHGSFGVVFQAKCLETGEAVAIKKVLQDK--------RYK 105
G T S++++R ++G G V A+ L VA+K + D R++
Sbjct: 1 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR 60
Query: 106 NRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKH-HYKMSQRMP 164
RE Q L+HP +V++ + T L +V+EYV R I H M+ +
Sbjct: 61 -REAQNAAALNHPAIVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 165 LIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN 224
+ + C+AL + H G+ HRD+KP N+L++ T+ +K+ DFG A+ + +
Sbjct: 119 IEVIA----DACQALNFSHQN-GIIHRDVKPANILISA-TNAVKVVDFGIARAIADSGNS 172
Query: 225 I----SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGV 274
+ + I + Y +PE G + A D++S GCVL E+L G+P F G+S V
Sbjct: 173 VXQTAAVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 123/290 (42%), Gaps = 48/290 (16%)
Query: 60 QPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQD-------KRYKNRELQTM 112
P+ YM R +G G F ++ ++T E A K V + K + E+
Sbjct: 21 DPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIH 80
Query: 113 RLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYF 172
+ LD+P+VV H FF +D+ ++ +VLE R + +K + + + +
Sbjct: 81 KSLDNPHVVGF-HGFF----EDDDFVYVVLEIC---RRRSLLELHKRRKAVTEPEARYFM 132
Query: 173 YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSA-KVLVKGEPNISYICSR 231
Q + + Y+HN V HRD+K NL +N +K+ DFG A K+ GE +
Sbjct: 133 RQTIQGVQYLHNN-RVIHRDLKLGNLFLN-DDMDVKIGDFGLATKIEFDGERKKDLCGTP 190
Query: 232 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE 291
Y APE + ++ +DIWS GC+L LL+G+P F E
Sbjct: 191 NYIAPE-VLCKKGHSFEVDIWSLGCILYTLLVGKPPF----------------------E 227
Query: 292 IKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRST 341
C+ Y K + P H + P A L+ R+L P LR +
Sbjct: 228 TSCLKETYIRIKKNEYSV-PRH------INPVASALIRRMLHADPTLRPS 270
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 113/220 (51%), Gaps = 26/220 (11%)
Query: 61 PKQTISYMAE----RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--REL 109
P Q +++ + + +G GSFG V K ETG A+K KV++ K+ ++ E
Sbjct: 26 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 85
Query: 110 QTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVK 169
+ ++ ++ P +V L+ F KD L +V+EYVP + H + R + +
Sbjct: 86 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGG---EMFSHLRRIGRFXEPHAR 137
Query: 170 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 229
Y QI Y+H ++ + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 138 FYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLC 192
Query: 230 SR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 268
Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 193 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 123/290 (42%), Gaps = 48/290 (16%)
Query: 60 QPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQD-------KRYKNRELQTM 112
P+ YM R +G G F ++ ++T E A K V + K + E+
Sbjct: 37 DPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIH 96
Query: 113 RLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYF 172
+ LD+P+VV H FF +D+ ++ +VLE R + +K + + + +
Sbjct: 97 KSLDNPHVVGF-HGFF----EDDDFVYVVLEIC---RRRSLLELHKRRKAVTEPEARYFM 148
Query: 173 YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSA-KVLVKGEPNISYICSR 231
Q + + Y+HN V HRD+K NL +N +K+ DFG A K+ GE +
Sbjct: 149 RQTIQGVQYLHNN-RVIHRDLKLGNLFLN-DDMDVKIGDFGLATKIEFDGERKKXLCGTP 206
Query: 232 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE 291
Y APE + ++ +DIWS GC+L LL+G+P F E
Sbjct: 207 NYIAPE-VLCKKGHSFEVDIWSLGCILYTLLVGKPPF----------------------E 243
Query: 292 IKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRST 341
C+ Y K + P H + P A L+ R+L P LR +
Sbjct: 244 TSCLKETYIRIKKNEYSV-PRH------INPVASALIRRMLHADPTLRPS 286
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 128/284 (45%), Gaps = 47/284 (16%)
Query: 68 MAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK---NRELQTMRLLD-HPNVVSL 123
+ ++ +G GSF + + ++ +A A+K + KR + +E+ ++L + HPN+V L
Sbjct: 14 LKDKPLGEGSFSICRKCVHKKSNQAFAVKII--SKRMEANTQKEITALKLCEGHPNIVKL 71
Query: 124 KHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAY 181
F D+L+ LV+E + E R+ K + I KL A+++
Sbjct: 72 HEVF-----HDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKL-----VSAVSH 121
Query: 182 IHNTIGVCHRDIKPQNLLVNPHTHQL--KLCDFGSAKVLVKGEPNISYIC-SRYYRAPEL 238
+H+ +GV HRD+KP+NLL L K+ DFG A++ + C + +Y APEL
Sbjct: 122 MHD-VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPEL 180
Query: 239 IFGATEYTAAIDIWSAGCVLAELLLGQPLFPGES---GVDQLVEIIKVLGTPTREEIKCM 295
+ Y + D+WS G +L +L GQ F VEI+K +
Sbjct: 181 L-NQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKK--------- 230
Query: 296 NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
+F F + W + Q EA DL+ LL PN R
Sbjct: 231 ----GDFSF---EGEAWKNVSQ-----EAKDLIQGLLTVDPNKR 262
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 113/220 (51%), Gaps = 26/220 (11%)
Query: 61 PKQTISYMAE----RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--REL 109
P Q +++ + + +G GSFG V K +ETG A+K KV++ K+ ++ E
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 110 QTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVK 169
+ ++ ++ P +V L+ F KD L +V+EY P + H + R + +
Sbjct: 93 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYAPGG---EMFSHLRRIGRFSEPHAR 144
Query: 170 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 229
Y QI Y+H ++ + +RD+KP+NL+++ + +++ DFG AK VKG +C
Sbjct: 145 FYAAQIVLTFEYLH-SLDLIYRDLKPENLMIDQQGY-IQVTDFGFAK-RVKGR--TWXLC 199
Query: 230 SR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 268
Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 144/326 (44%), Gaps = 70/326 (21%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNREL---QTMRLL-----DHPNVVS 122
RV+G GS+ V + +T A+K V ++ + ++ QT + + +HP +V
Sbjct: 26 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 85
Query: 123 LKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
L CF + E L V+EYV + H + +++P + + Y +I AL Y+
Sbjct: 86 LHSCF-----QTESRLFFVIEYVNGGD---LMFHMQRQRKLPEEHARFYSAEISLALNYL 137
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC-SRYYRAPELIFG 241
H G+ +RD+K N+L++ H +KL D+G K ++ S C + Y APE++ G
Sbjct: 138 HER-GIIYRDLKLDNVLLDSEGH-IKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRG 195
Query: 242 ATEYTAAIDIWSAGCVLAELLLGQPLF--------PGESGVDQLVEII------------ 281
+Y ++D W+ G ++ E++ G+ F P ++ D L ++I
Sbjct: 196 E-DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSMS 254
Query: 282 --------KVLGTPTREEIKCMNPNYTEFKFPQIKAHP------WHKIFQKRMPPEAVDL 327
L +E + C+ + F I+ HP W + QK++ P
Sbjct: 255 VKAASVLKSFLNKDPKERLGCL----PQTGFADIQGHPFFRNVDWDMMEQKQVVP----- 305
Query: 328 VSRLLQYSPNLRSTAFDAVGSFDSSF 353
+ PN+ S F + +FDS F
Sbjct: 306 -----PFKPNI-SGEF-GLDNFDSQF 324
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 17/198 (8%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK---NRELQTMRLLDHPNVVSLKHCFFS 129
+G G+FGV + ++ E VA+K + + ++ RE+ R L HPN+V K +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 130 TTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIG 187
T +L +V+EY E R+ + R + +F Q+ ++Y H +
Sbjct: 87 PT-----HLAIVMEYASGGELFERICN-----AGRFSEDEARFFFQQLISGVSYCH-AMQ 135
Query: 188 VCHRDIKPQNLLVNPH-THQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 246
VCHRD+K +N L++ +LK+C FG +K V S + + Y APE++
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDG 195
Query: 247 AAIDIWSAGCVLAELLLG 264
D+WS G L +L+G
Sbjct: 196 KVADVWSCGVTLYVMLVG 213
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 117/266 (43%), Gaps = 30/266 (11%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIK----KVLQDKRYK-NRELQTMRLLDHPNVV 121
Y V+G G+F V A+ T + VAIK K L+ K E+ + + HPN+V
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAY 181
+L + S LYL + L E R+++ + + + +Q+ A+ Y
Sbjct: 80 ALDDIYESGGH---LYLIMQLVSGGELFDRIVEKGFYTERDASRL-----IFQVLDAVKY 131
Query: 182 IHNTIGVCHRDIKPQNLLVNP--HTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 239
+H+ +G+ HRD+KP+NLL ++ + DFG +K+ G + + Y APE +
Sbjct: 132 LHD-LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPE-V 189
Query: 240 FGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKV---LGTPTREEIKCMN 296
Y+ A+D WS G + LL G P F E+ +I+K +P ++I
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSA 249
Query: 297 PNY----------TEFKFPQIKAHPW 312
++ F Q HPW
Sbjct: 250 KDFIRHLMEKDPEKRFTCEQALQHPW 275
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 112/220 (50%), Gaps = 26/220 (11%)
Query: 61 PKQTISYMAE----RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--REL 109
P Q +++ + + +G GSFG V K ETG A+K KV++ K+ ++ E
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 110 QTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVK 169
+ ++ ++ P +V L+ F KD L +V+EY P + H + R + +
Sbjct: 94 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYAPGG---EMFSHLRRIGRFSEPHAR 145
Query: 170 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 229
Y QI Y+H ++ + +RD+KP+NL+++ + +K+ DFG AK VKG +C
Sbjct: 146 FYAAQIVLTFEYLH-SLDLIYRDLKPENLMIDQQGY-IKVTDFGFAK-RVKGR--TWXLC 200
Query: 230 SR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 268
Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 201 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 133/284 (46%), Gaps = 50/284 (17%)
Query: 71 RVVGHGSFGVVFQAKCL---ETGEAVAIK-----KVLQDKRYKNRELQTMRLLDH----P 118
+V+G G++G VF + + +TG+ A+K ++Q + ++L+H P
Sbjct: 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 119
Query: 119 NVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRA 178
+V+L + F + T+ L+L+L+Y+ + H +R V++Y +I A
Sbjct: 120 FLVTLHYAFQTETK-----LHLILDYINGGE---LFTHLSQRERFTEHEVQIYVGEIVLA 171
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY-ICSRY-YRAP 236
L ++H +G+ +RDIK +N+L++ + H + L DFG +K V E +Y C Y AP
Sbjct: 172 LEHLHK-LGIIYRDIKLENILLDSNGHVV-LTDFGLSKEFVADETERAYDFCGTIEYMAP 229
Query: 237 ELIFGA-TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM 295
+++ G + + A+D WS G ++ ELL G F + + EI +R +K
Sbjct: 230 DIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEI-------SRRILKSE 282
Query: 296 NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
P +PQ M A DL+ RLL P R
Sbjct: 283 PP------YPQ------------EMSALAKDLIQRLLMKDPKKR 308
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 107/207 (51%), Gaps = 26/207 (12%)
Query: 71 RVVGHGSFGVV----FQAKCLETGEAVAIKKVLQDK----RYKNRELQTMRLLDHPNVVS 122
R +G G+FG V + TGE VA+KK+ R RE++ ++ L H N+V
Sbjct: 19 RQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 123 LKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
K +S ++ L L++E++P R ++ K +R+ I + Y QIC+ + Y+
Sbjct: 79 YKGVCYSAGRRN---LKLIMEFLPYGSLR--EYLQKHKERIDHIKLLQYTSQICKGMEYL 133
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKG-------EPNISYICSRYYRA 235
T HRD+ +N+LV + +++K+ DFG KVL + EP S I ++ A
Sbjct: 134 -GTKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYA 188
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELL 262
PE + ++++ A D+WS G VL EL
Sbjct: 189 PESL-TESKFSVASDVWSFGVVLYELF 214
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 144/326 (44%), Gaps = 70/326 (21%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNREL---QTMRLL-----DHPNVVS 122
RV+G GS+ V + +T A+K V ++ + ++ QT + + +HP +V
Sbjct: 15 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 74
Query: 123 LKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
L CF + E L V+EYV + H + +++P + + Y +I AL Y+
Sbjct: 75 LHSCF-----QTESRLFFVIEYVNGGD---LMFHMQRQRKLPEEHARFYSAEISLALNYL 126
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC-SRYYRAPELIFG 241
H G+ +RD+K N+L++ H +KL D+G K ++ S C + Y APE++ G
Sbjct: 127 HER-GIIYRDLKLDNVLLDSEGH-IKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRG 184
Query: 242 ATEYTAAIDIWSAGCVLAELLLGQPLF--------PGESGVDQLVEII------------ 281
+Y ++D W+ G ++ E++ G+ F P ++ D L ++I
Sbjct: 185 E-DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLS 243
Query: 282 --------KVLGTPTREEIKCMNPNYTEFKFPQIKAHP------WHKIFQKRMPPEAVDL 327
L +E + C + + F I+ HP W + QK++ P
Sbjct: 244 VKAASVLKSFLNKDPKERLGC----HPQTGFADIQGHPFFRNVDWDMMEQKQVVPP---- 295
Query: 328 VSRLLQYSPNLRSTAFDAVGSFDSSF 353
+ PN+ S F + +FDS F
Sbjct: 296 ------FKPNI-SGEF-GLDNFDSQF 313
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 26/205 (12%)
Query: 73 VGHGSFGVV----FQAKCLETGEAVAIKKVLQDK----RYKNRELQTMRLLDHPNVVSLK 124
+G G+FG V + TGE VA+KK+ R RE++ ++ L H N+V K
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 125 HCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN 184
+S ++ L L++EY+P R +K +R+ I + Y QIC+ + Y+
Sbjct: 109 GVCYSAGRRN---LKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYL-G 162
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKG-------EPNISYICSRYYRAPE 237
T HRD+ +N+LV + +++K+ DFG KVL + EP S I ++ APE
Sbjct: 163 TKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE 218
Query: 238 LIFGATEYTAAIDIWSAGCVLAELL 262
+ ++++ A D+WS G VL EL
Sbjct: 219 SL-TESKFSVASDVWSFGVVLYELF 242
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 143/326 (43%), Gaps = 70/326 (21%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVA---IKKVLQDKRYKNRELQTMRLL-----DHPNVVS 122
RV+G GS+ V + +T A +KK L + +QT + + +HP +V
Sbjct: 58 RVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 117
Query: 123 LKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
L CF + E L V+EYV + H + +++P + + Y +I AL Y+
Sbjct: 118 LHSCF-----QTESRLFFVIEYVNGGD---LMFHMQRQRKLPEEHARFYSAEISLALNYL 169
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKV-LVKGEPNISYICSRYYRAPELIFG 241
H G+ +RD+K N+L++ H +KL D+G K L G+ ++ + Y APE++ G
Sbjct: 170 HER-GIIYRDLKLDNVLLDSEGH-IKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRG 227
Query: 242 ATEYTAAIDIWSAGCVLAELLLGQPLF--------PGESGVDQLVEII------------ 281
+Y ++D W+ G ++ E++ G+ F P ++ D L ++I
Sbjct: 228 E-DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLS 286
Query: 282 --------KVLGTPTREEIKCMNPNYTEFKFPQIKAHP------WHKIFQKRMPPEAVDL 327
L +E + C + + F I+ HP W + QK++ P
Sbjct: 287 VKAASVLKSFLNKDPKERLGC----HPQTGFADIQGHPFFRNVDWDMMEQKQVVP----- 337
Query: 328 VSRLLQYSPNLRSTAFDAVGSFDSSF 353
+ PN+ S F + +FDS F
Sbjct: 338 -----PFKPNI-SGEF-GLDNFDSQF 356
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 114/234 (48%), Gaps = 27/234 (11%)
Query: 59 GQPKQTISYMAER-----VVGHGSFGVVFQAKCLETGEAVAIKKVLQDK--------RYK 105
G T S++++R ++G G V A+ L VA+K + D R++
Sbjct: 1 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR 60
Query: 106 NRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKH-HYKMSQRMP 164
RE Q L+HP +V++ + T L +V+EYV R I H M+ +
Sbjct: 61 -REAQNAAALNHPAIVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 165 LIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN 224
+ + C+AL + H G+ HRD+KP N++++ T+ +K+ DFG A+ + +
Sbjct: 119 IEVIA----DACQALNFSHQN-GIIHRDVKPANIMISA-TNAVKVMDFGIARAIADSGNS 172
Query: 225 IS----YICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGV 274
++ I + Y +PE G + A D++S GCVL E+L G+P F G+S V
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 26/205 (12%)
Query: 73 VGHGSFGVV----FQAKCLETGEAVAIKKVLQDK----RYKNRELQTMRLLDHPNVVSLK 124
+G G+FG V + TGE VA+KK+ R RE++ ++ L H N+V K
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 125 HCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN 184
+S ++ L L++EY+P R +K +R+ I + Y QIC+ + Y+
Sbjct: 85 GVCYSAGRRN---LKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYL-G 138
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKG-------EPNISYICSRYYRAPE 237
T HRD+ +N+LV + +++K+ DFG KVL + EP S I ++ APE
Sbjct: 139 TKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE 194
Query: 238 LIFGATEYTAAIDIWSAGCVLAELL 262
+ ++++ A D+WS G VL EL
Sbjct: 195 SL-TESKFSVASDVWSFGVVLYELF 218
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 144/326 (44%), Gaps = 70/326 (21%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNREL---QTMRLL-----DHPNVVS 122
RV+G GS+ V + +T A+K V ++ + ++ QT + + +HP +V
Sbjct: 11 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 70
Query: 123 LKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
L CF + E L V+EYV + H + +++P + + Y +I AL Y+
Sbjct: 71 LHSCF-----QTESRLFFVIEYVNGGD---LMFHMQRQRKLPEEHARFYSAEISLALNYL 122
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC-SRYYRAPELIFG 241
H G+ +RD+K N+L++ H +KL D+G K ++ S C + Y APE++ G
Sbjct: 123 HER-GIIYRDLKLDNVLLDSEGH-IKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRG 180
Query: 242 ATEYTAAIDIWSAGCVLAELLLGQPLF--------PGESGVDQLVEII------------ 281
+Y ++D W+ G ++ E++ G+ F P ++ D L ++I
Sbjct: 181 E-DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLS 239
Query: 282 --------KVLGTPTREEIKCMNPNYTEFKFPQIKAHP------WHKIFQKRMPPEAVDL 327
L +E + C + + F I+ HP W + QK++ P
Sbjct: 240 VKAASVLKSFLNKDPKERLGC----HPQTGFADIQGHPFFRNVDWDMMEQKQVVPP---- 291
Query: 328 VSRLLQYSPNLRSTAFDAVGSFDSSF 353
+ PN+ S F + +FDS F
Sbjct: 292 ------FKPNI-SGEF-GLDNFDSQF 309
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 113/220 (51%), Gaps = 26/220 (11%)
Query: 61 PKQTISYMAE----RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--REL 109
P Q +++ + + +G GSFG V K +ETG A+K KV++ K+ ++ E
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 110 QTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVK 169
+ ++ ++ P +V L+ F KD L +V+EYV + H + R + +
Sbjct: 93 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVAGG---EMFSHLRRIGRFSEPHAR 144
Query: 170 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC 229
Y QI Y+H ++ + +RD+KP+NLL++ + +++ DFG AK VKG +C
Sbjct: 145 FYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLC 199
Query: 230 SR-YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 268
Y APE+I + Y A+D W+ G ++ E+ G P F
Sbjct: 200 GTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 26/205 (12%)
Query: 73 VGHGSFGVV----FQAKCLETGEAVAIKKVLQDK----RYKNRELQTMRLLDHPNVVSLK 124
+G G+FG V + TGE VA+KK+ R RE++ ++ L H N+V K
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 125 HCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN 184
+S ++ L L++EY+P R +K +R+ I + Y QIC+ + Y+
Sbjct: 84 GVCYSAGRRN---LKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYL-G 137
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKG-------EPNISYICSRYYRAPE 237
T HRD+ +N+LV + +++K+ DFG KVL + EP S I ++ APE
Sbjct: 138 TKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE 193
Query: 238 LIFGATEYTAAIDIWSAGCVLAELL 262
+ ++++ A D+WS G VL EL
Sbjct: 194 SL-TESKFSVASDVWSFGVVLYELF 217
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 113/232 (48%), Gaps = 27/232 (11%)
Query: 59 GQPKQTISYMAER-----VVGHGSFGVVFQAKCLETGEAVAIKKVLQDK--------RYK 105
G T S++++R ++G G V A+ L VA+K + D R++
Sbjct: 1 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR 60
Query: 106 NRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKH-HYKMSQRMP 164
RE Q L+HP +V++ + T L +V+EYV R I H M+ +
Sbjct: 61 -REAQNAAALNHPAIVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 165 LIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN 224
+ + C+AL + H G+ HRD+KP N++++ T+ +K+ DFG A+ + +
Sbjct: 119 IEVIA----DACQALNFSHQN-GIIHRDVKPANIMISA-TNAVKVMDFGIARAIADSGNS 172
Query: 225 IS----YICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGES 272
++ I + Y +PE G + A D++S GCVL E+L G+P F G+S
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 26/205 (12%)
Query: 73 VGHGSFGVV----FQAKCLETGEAVAIKKVLQDK----RYKNRELQTMRLLDHPNVVSLK 124
+G G+FG V + TGE VA+KK+ R RE++ ++ L H N+V K
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 125 HCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN 184
+S ++ L L++EY+P R +K +R+ I + Y QIC+ + Y+
Sbjct: 83 GVCYSAGRRN---LKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYL-G 136
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKG-------EPNISYICSRYYRAPE 237
T HRD+ +N+LV + +++K+ DFG KVL + EP S I ++ APE
Sbjct: 137 TKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE 192
Query: 238 LIFGATEYTAAIDIWSAGCVLAELL 262
+ ++++ A D+WS G VL EL
Sbjct: 193 SL-TESKFSVASDVWSFGVVLYELF 216
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 107/224 (47%), Gaps = 20/224 (8%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKV------LQDKRYKNRELQTMRLLDHPNV 120
Y+ + +G GSFG K E G IK++ +++ RE+ + + HPN+
Sbjct: 26 YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNI 85
Query: 121 VSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRA 178
V + F E LY+ V++Y + R+ + Q ++ +F QIC A
Sbjct: 86 VQYRESF---EENGSLYI--VMDYCEGGDLFKRINAQKGVLFQEDQILD---WFVQICLA 137
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKG-EPNISYICSRYYRAPE 237
L ++H+ + HRDIK QN+ + ++L DFG A+VL E + I + YY +PE
Sbjct: 138 LKHVHDR-KILHRDIKSQNIFLT-KDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPE 195
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 281
I Y DIW+ GCVL EL + F S + +++II
Sbjct: 196 -ICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKII 238
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 26/205 (12%)
Query: 73 VGHGSFGVV----FQAKCLETGEAVAIKKVLQDK----RYKNRELQTMRLLDHPNVVSLK 124
+G G+FG V + TGE VA+KK+ R RE++ ++ L H N+V K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 125 HCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN 184
+S ++ L L++EY+P R +K +R+ I + Y QIC+ + Y+
Sbjct: 81 GVCYSAGRRN---LKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYL-G 134
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKG-------EPNISYICSRYYRAPE 237
T HRD+ +N+LV + +++K+ DFG KVL + EP S I ++ APE
Sbjct: 135 TKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE 190
Query: 238 LIFGATEYTAAIDIWSAGCVLAELL 262
+ ++++ A D+WS G VL EL
Sbjct: 191 SL-TESKFSVASDVWSFGVVLYELF 214
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 114/234 (48%), Gaps = 27/234 (11%)
Query: 59 GQPKQTISYMAER-----VVGHGSFGVVFQAKCLETGEAVAIKKVLQDK--------RYK 105
G T S++++R ++G G V A+ L VA+K + D R++
Sbjct: 1 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFR 60
Query: 106 NRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKH-HYKMSQRMP 164
RE Q L+HP +V++ + T L +V+EYV R I H M+ +
Sbjct: 61 -REAQNAAALNHPAIVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 165 LIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN 224
+ + C+AL + H G+ HRD+KP N++++ T+ +K+ DFG A+ + +
Sbjct: 119 IEVIA----DACQALNFSHQN-GIIHRDVKPANIMISA-TNAVKVMDFGIARAIADSGNS 172
Query: 225 IS----YICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGV 274
++ I + Y +PE G + A D++S GCVL E+L G+P F G+S V
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 26/205 (12%)
Query: 73 VGHGSFGVV----FQAKCLETGEAVAIKKVLQDK----RYKNRELQTMRLLDHPNVVSLK 124
+G G+FG V + TGE VA+KK+ R RE++ ++ L H N+V K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 125 HCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN 184
+S ++ L L++EY+P R + K +R+ I + Y QIC+ + Y+
Sbjct: 78 GVCYSAGRRN---LKLIMEYLPYGSLR--DYLQKHKERIDHIKLLQYTSQICKGMEYL-G 131
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKG-------EPNISYICSRYYRAPE 237
T HRD+ +N+LV + +++K+ DFG KVL + EP S I ++ APE
Sbjct: 132 TKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEFFKVKEPGESPI---FWYAPE 187
Query: 238 LIFGATEYTAAIDIWSAGCVLAELL 262
+ ++++ A D+WS G VL EL
Sbjct: 188 SL-TESKFSVASDVWSFGVVLYELF 211
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 26/205 (12%)
Query: 73 VGHGSFGVV----FQAKCLETGEAVAIKKVLQDK----RYKNRELQTMRLLDHPNVVSLK 124
+G G+FG V + TGE VA+KK+ R RE++ ++ L H N+V K
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 125 HCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN 184
+S ++ L L++EY+P R +K +R+ I + Y QIC+ + Y+
Sbjct: 82 GVCYSAGRRN---LKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYL-G 135
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKG-------EPNISYICSRYYRAPE 237
T HRD+ +N+LV + +++K+ DFG KVL + EP S I ++ APE
Sbjct: 136 TKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE 191
Query: 238 LIFGATEYTAAIDIWSAGCVLAELL 262
+ ++++ A D+WS G VL EL
Sbjct: 192 SL-TESKFSVASDVWSFGVVLYELF 215
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 26/205 (12%)
Query: 73 VGHGSFGVV----FQAKCLETGEAVAIKKVLQDK----RYKNRELQTMRLLDHPNVVSLK 124
+G G+FG V + TGE VA+KK+ R RE++ ++ L H N+V K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 125 HCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN 184
+S ++ L L++EY+P R +K +R+ I + Y QIC+ + Y+
Sbjct: 78 GVCYSAGRRN---LKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYL-G 131
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKG-------EPNISYICSRYYRAPE 237
T HRD+ +N+LV + +++K+ DFG KVL + EP S I ++ APE
Sbjct: 132 TKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE 187
Query: 238 LIFGATEYTAAIDIWSAGCVLAELL 262
+ ++++ A D+WS G VL EL
Sbjct: 188 SL-TESKFSVASDVWSFGVVLYELF 211
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 26/205 (12%)
Query: 73 VGHGSFGVV----FQAKCLETGEAVAIKKVLQDK----RYKNRELQTMRLLDHPNVVSLK 124
+G G+FG V + TGE VA+KK+ R RE++ ++ L H N+V K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 125 HCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN 184
+S ++ L L++EY+P R + K +R+ I + Y QIC+ + Y+
Sbjct: 78 GVCYSAGRRN---LKLIMEYLPYGSLR--DYLQKHKERIDHIKLLQYTSQICKGMEYL-G 131
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKG-------EPNISYICSRYYRAPE 237
T HRD+ +N+LV + +++K+ DFG KVL + EP S I ++ APE
Sbjct: 132 TKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE 187
Query: 238 LIFGATEYTAAIDIWSAGCVLAELL 262
+ ++++ A D+WS G VL EL
Sbjct: 188 SL-TESKFSVASDVWSFGVVLYELF 211
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 26/205 (12%)
Query: 73 VGHGSFGVV----FQAKCLETGEAVAIKKVLQDK----RYKNRELQTMRLLDHPNVVSLK 124
+G G+FG V + TGE VA+KK+ R RE++ ++ L H N+V K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 125 HCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN 184
+S ++ L L++EY+P R +K +R+ I + Y QIC+ + Y+
Sbjct: 96 GVCYSAGRRN---LKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYL-G 149
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKG-------EPNISYICSRYYRAPE 237
T HRD+ +N+LV + +++K+ DFG KVL + EP S I ++ APE
Sbjct: 150 TKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE 205
Query: 238 LIFGATEYTAAIDIWSAGCVLAELL 262
+ ++++ A D+WS G VL EL
Sbjct: 206 SL-TESKFSVASDVWSFGVVLYELF 229
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 26/205 (12%)
Query: 73 VGHGSFGVV----FQAKCLETGEAVAIKKVLQDK----RYKNRELQTMRLLDHPNVVSLK 124
+G G+FG V + TGE VA+KK+ R RE++ ++ L H N+V K
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 125 HCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN 184
+S ++ L L++EY+P R + K +R+ I + Y QIC+ + Y+
Sbjct: 76 GVCYSAGRRN---LKLIMEYLPYGSLR--DYLQKHKERIDHIKLLQYTSQICKGMEYL-G 129
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKG-------EPNISYICSRYYRAPE 237
T HRD+ +N+LV + +++K+ DFG KVL + EP S I ++ APE
Sbjct: 130 TKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE 185
Query: 238 LIFGATEYTAAIDIWSAGCVLAELL 262
+ ++++ A D+WS G VL EL
Sbjct: 186 SL-TESKFSVASDVWSFGVVLYELF 209
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 103/201 (51%), Gaps = 22/201 (10%)
Query: 73 VGHGSFGVVFQAKCLETGEAVA-------IKKVLQDKRYKNRELQTMRLLDHPNVVSLKH 125
+G G+ GVVF+ +G +A IK ++++ RELQ + + P +V
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII--RELQVLHECNSPYIVGFYG 74
Query: 126 CFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN 184
F+S E +++ +E++ ++ +V+K + R+P + + + L Y+
Sbjct: 75 AFYSDGE-----ISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLRE 125
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 244
+ HRD+KP N+LVN ++KLCDFG + L+ N ++ +R Y +PE + G T
Sbjct: 126 KHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDEMAN-EFVGTRSYMSPERLQG-TH 182
Query: 245 YTAAIDIWSAGCVLAELLLGQ 265
Y+ DIWS G L E+ +G+
Sbjct: 183 YSVQSDIWSMGLSLVEMAVGR 203
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 103/203 (50%), Gaps = 21/203 (10%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNR------ELQTMRLLDHPNVVSLKHC 126
+G GS G+V A +G+ VA+KK+ D R + R E+ MR H NVV + +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 216
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTI 186
+ DEL++ V+E++ I H +M++ + + +AL+ +H
Sbjct: 217 YLVG---DELWV--VMEFLEGGALTDIVTHTRMNEEQ----IAAVCLAVLQALSVLHAQ- 266
Query: 187 GVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC-SRYYRAPELIFGATEY 245
GV HRDIK ++L+ H ++KL DFG + K P + + Y+ APELI Y
Sbjct: 267 GVIHRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI-SRLPY 324
Query: 246 TAAIDIWSAGCVLAELLLGQPLF 268
+DIWS G ++ E++ G+P +
Sbjct: 325 GPEVDIWSLGIMVIEMVDGEPPY 347
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 26/205 (12%)
Query: 73 VGHGSFGVV----FQAKCLETGEAVAIKKVLQDK----RYKNRELQTMRLLDHPNVVSLK 124
+G G+FG V + TGE VA+KK+ R RE++ ++ L H N+V K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 125 HCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN 184
+S ++ L L++EY+P R +K +R+ I + Y QIC+ + Y+
Sbjct: 96 GVCYSAGRRN---LKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYL-G 149
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKG-------EPNISYICSRYYRAPE 237
T HRD+ +N+LV + +++K+ DFG KVL + EP S I ++ APE
Sbjct: 150 TKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE 205
Query: 238 LIFGATEYTAAIDIWSAGCVLAELL 262
+ ++++ A D+WS G VL EL
Sbjct: 206 SL-TESKFSVASDVWSFGVVLYELF 229
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 26/205 (12%)
Query: 73 VGHGSFGVV----FQAKCLETGEAVAIKKVLQDK----RYKNRELQTMRLLDHPNVVSLK 124
+G G+FG V + TGE VA+KK+ R RE++ ++ L H N+V K
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 125 HCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN 184
+S ++ L L++EY+P R + K +R+ I + Y QIC+ + Y+
Sbjct: 77 GVCYSAGRRN---LKLIMEYLPYGSLR--DYLQKHKERIDHIKLLQYTSQICKGMEYL-G 130
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKG-------EPNISYICSRYYRAPE 237
T HRD+ +N+LV + +++K+ DFG KVL + EP S I ++ APE
Sbjct: 131 TKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAPE 186
Query: 238 LIFGATEYTAAIDIWSAGCVLAELL 262
+ ++++ A D+WS G VL EL
Sbjct: 187 SL-TESKFSVASDVWSFGVVLYELF 210
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 114/234 (48%), Gaps = 27/234 (11%)
Query: 59 GQPKQTISYMAER-----VVGHGSFGVVFQAKCLETGEAVAIKKVLQDK--------RYK 105
G T S++++R ++G G V A+ L VA+K + D R++
Sbjct: 1 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFR 60
Query: 106 NRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKH-HYKMSQRMP 164
RE Q L+HP +V++ + T L +V+EYV R I H M+ +
Sbjct: 61 -REAQNAAALNHPAIVAVYATGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 165 LIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN 224
+ + C+AL + H G+ HRD+KP N++++ T+ +K+ DFG A+ + +
Sbjct: 119 IEVIA----DACQALNFSHQN-GIIHRDVKPANIMISA-TNAVKVMDFGIARAIADSGNS 172
Query: 225 IS----YICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGV 274
++ I + Y +PE G + A D++S GCVL E+L G+P F G+S V
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 114/234 (48%), Gaps = 27/234 (11%)
Query: 59 GQPKQTISYMAER-----VVGHGSFGVVFQAKCLETGEAVAIKKVLQDK--------RYK 105
G T S++++R ++G G V A+ L VA+K + D R++
Sbjct: 18 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFR 77
Query: 106 NRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKH-HYKMSQRMP 164
RE Q L+HP +V++ + T L +V+EYV R I H M+ +
Sbjct: 78 -REAQNAAALNHPAIVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRA 135
Query: 165 LIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN 224
+ + C+AL + H G+ HRD+KP N++++ T+ +K+ DFG A+ + +
Sbjct: 136 IEVIA----DACQALNFSHQN-GIIHRDVKPANIMISA-TNAVKVMDFGIARAIADSGNS 189
Query: 225 IS----YICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGV 274
++ I + Y +PE G + A D++S GCVL E+L G+P F G+S V
Sbjct: 190 VTQTAAVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPV 242
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 111/221 (50%), Gaps = 25/221 (11%)
Query: 59 GQPKQTISYMAERV-VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNR------ELQT 111
G P+ SY+ + +G GS G+V A +G+ VA+KK+ D R + R E+
Sbjct: 16 GDPR---SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVI 70
Query: 112 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 171
MR H NVV + + + DEL++ V+E++ I H +M++ +
Sbjct: 71 MRDYQHENVVEMYNSYLVG---DELWV--VMEFLEGGALTDIVTHTRMNEEQ----IAAV 121
Query: 172 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC-S 230
+ +AL+ +H GV HRDIK ++L+ H ++KL DFG + K P + +
Sbjct: 122 CLAVLQALSVLHAQ-GVIHRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGT 179
Query: 231 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGE 271
Y+ APELI Y +DIWS G ++ E++ G+P + E
Sbjct: 180 PYWMAPELI-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 219
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 116/230 (50%), Gaps = 26/230 (11%)
Query: 71 RVVGHGSFGVVFQAKCL---ETGEAVAIKKV------LQDKRYKNRELQTMRLLDHPNVV 121
+V+G GSFG VF + + ++G A+K + ++D+ E + ++HP VV
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVV 93
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIY--VKLYFYQICRAL 179
L + F + E L L+L+++ R ++S+ + VK Y ++ L
Sbjct: 94 KLHYAF-----QTEGKLYLILDFL-----RGGDLFTRLSKEVMFTEEDVKFYLAELALGL 143
Query: 180 AYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY-YRAPEL 238
++H ++G+ +RD+KP+N+L++ H +KL DFG +K + E C Y APE+
Sbjct: 144 DHLH-SLGIIYRDLKPENILLDEEGH-IKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEV 201
Query: 239 IFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKV-LGTP 287
+ ++ + D WS G ++ E+L G F G+ + + I+K LG P
Sbjct: 202 V-NRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMP 250
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 104/206 (50%), Gaps = 21/206 (10%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNR------ELQTMRLLDHPNVVSLKHC 126
+G GS G+V A +G+ VA+KK+ D R + R E+ MR H NVV + +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 94
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTI 186
+ DEL++ V+E++ I H +M++ + + +AL+ +H
Sbjct: 95 YLVG---DELWV--VMEFLEGGALTDIVTHTRMNEEQ----IAAVCLAVLQALSVLHAQ- 144
Query: 187 GVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC-SRYYRAPELIFGATEY 245
GV HRDIK ++L+ H ++KL DFG + K P + + Y+ APELI Y
Sbjct: 145 GVIHRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI-SRLPY 202
Query: 246 TAAIDIWSAGCVLAELLLGQPLFPGE 271
+DIWS G ++ E++ G+P + E
Sbjct: 203 GPEVDIWSLGIMVIEMVDGEPPYFNE 228
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 104/206 (50%), Gaps = 21/206 (10%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNR------ELQTMRLLDHPNVVSLKHC 126
+G GS G+V A +G+ VA+KK+ D R + R E+ MR H NVV + +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 96
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTI 186
+ DEL++ V+E++ I H +M++ + + +AL+ +H
Sbjct: 97 YLVG---DELWV--VMEFLEGGALTDIVTHTRMNEEQ----IAAVCLAVLQALSVLHAQ- 146
Query: 187 GVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC-SRYYRAPELIFGATEY 245
GV HRDIK ++L+ H ++KL DFG + K P + + Y+ APELI Y
Sbjct: 147 GVIHRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI-SRLPY 204
Query: 246 TAAIDIWSAGCVLAELLLGQPLFPGE 271
+DIWS G ++ E++ G+P + E
Sbjct: 205 GPEVDIWSLGIMVIEMVDGEPPYFNE 230
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 108/206 (52%), Gaps = 28/206 (13%)
Query: 73 VGHGSFGVV----FQAKCLETGEAVAIKKVLQDK----RYKNRELQTMRLLDHPNVVSLK 124
+G G+FG V + TGE VA+KK+ R RE++ ++ L H N+V K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 125 HCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
+S ++ L L++EY+P ++ ++ H ++R+ I + Y QIC+ + Y+
Sbjct: 81 GVCYSAGRRN---LKLIMEYLPYGSLRDYLQAH---AERIDHIKLLQYTSQICKGMEYL- 133
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKG-------EPNISYICSRYYRAP 236
T HRD+ +N+LV + +++K+ DFG KVL + EP S I ++ AP
Sbjct: 134 GTKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI---FWYAP 189
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELL 262
E + ++++ A D+WS G VL EL
Sbjct: 190 ESL-TESKFSVASDVWSFGVVLYELF 214
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 103/203 (50%), Gaps = 21/203 (10%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNR------ELQTMRLLDHPNVVSLKHC 126
+G GS G+V A +G+ VA+KK+ D R + R E+ MR H NVV + +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 139
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTI 186
+ DEL++ V+E++ I H +M++ + + +AL+ +H
Sbjct: 140 YLVG---DELWV--VMEFLEGGALTDIVTHTRMNEEQ----IAAVCLAVLQALSVLHAQ- 189
Query: 187 GVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC-SRYYRAPELIFGATEY 245
GV HRDIK ++L+ H ++KL DFG + K P + + Y+ APELI Y
Sbjct: 190 GVIHRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI-SRLPY 247
Query: 246 TAAIDIWSAGCVLAELLLGQPLF 268
+DIWS G ++ E++ G+P +
Sbjct: 248 GPEVDIWSLGIMVIEMVDGEPPY 270
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 108/236 (45%), Gaps = 39/236 (16%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQ-------DKRYKNRELQTMRLLDHP 118
Y +V+G G+FG V + T + A+K + + D + E M + P
Sbjct: 70 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 129
Query: 119 NVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRA 178
VV L + F +D+ YL +V+EY+P + +Y + ++ + + Y ++ A
Sbjct: 130 WVVQLFYAF-----QDDRYLYMVMEYMPGGDLVNLMSNYDVPEK----WARFYTAEVVLA 180
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVK----------GEPNISYI 228
L IH ++G HRD+KP N+L++ H LKL DFG+ + K G P+
Sbjct: 181 LDAIH-SMGFIHRDVKPDNMLLDKSGH-LKLADFGTCMKMNKEGMVRCDTAVGTPD---- 234
Query: 229 CSRYYRAPELI---FGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 281
Y +PE++ G Y D WS G L E+L+G F +S V +I+
Sbjct: 235 ----YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 286
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 108/236 (45%), Gaps = 39/236 (16%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQ-------DKRYKNRELQTMRLLDHP 118
Y +V+G G+FG V + T + A+K + + D + E M + P
Sbjct: 75 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 134
Query: 119 NVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRA 178
VV L + F +D+ YL +V+EY+P + +Y + ++ + + Y ++ A
Sbjct: 135 WVVQLFYAF-----QDDRYLYMVMEYMPGGDLVNLMSNYDVPEK----WARFYTAEVVLA 185
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVK----------GEPNISYI 228
L IH ++G HRD+KP N+L++ H LKL DFG+ + K G P+
Sbjct: 186 LDAIH-SMGFIHRDVKPDNMLLDKSGH-LKLADFGTCMKMNKEGMVRCDTAVGTPD---- 239
Query: 229 CSRYYRAPELI---FGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 281
Y +PE++ G Y D WS G L E+L+G F +S V +I+
Sbjct: 240 ----YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 291
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 124/277 (44%), Gaps = 50/277 (18%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 123
R +G G FG V+ A+ + +A+K + + + K RE++ L HPN++ +
Sbjct: 21 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 80
Query: 124 KHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
+ F D + L+LE+ P +++ ++ H + ++ +++ ++ AL Y
Sbjct: 81 YNYF-----HDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME----ELADALHYC 131
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H V HRDIKP+NLL+ + +LK+ DFG + V + Y PE+I G
Sbjct: 132 HER-KVIHRDIKPENLLMG-YKGELKIADFGWS-VHAPSLRRRXMCGTLDYLPPEMIEGK 188
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 302
T + +D+W AG + E L+G P F S + I+ V +
Sbjct: 189 T-HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV-----------------DL 230
Query: 303 KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
KFP + + DL+S+LL+Y P R
Sbjct: 231 KFPPF------------LSDGSKDLISKLLRYHPPQR 255
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 131/285 (45%), Gaps = 50/285 (17%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLK 124
+ +G G++G V A T EAVA+K ++ KR + +E+ ++L+H NVV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEIXINKMLNHENVVK-- 68
Query: 125 HCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F+ + + L LEY E R+ + MP + +F+Q+ + Y+
Sbjct: 69 --FYGHRREGNIQY-LFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLV--KGEPNISYICSRY-YRAPELI 239
H IG+ HRDIKP+NLL++ + LK+ DFG A V E ++ +C Y APEL+
Sbjct: 121 HG-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 240 FGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY 299
+ +D+WS G VL +L G+ P + D E Y
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------Y 217
Query: 300 TEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFD 344
+++K + +PW KI + L+ ++L +P+ R T D
Sbjct: 218 SDWKEKKTYLNPWKKIDSAPLA-----LLHKILVENPSARITIPD 257
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 124/289 (42%), Gaps = 45/289 (15%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNR-------ELQTMRLLDHPN 119
Y + +G G++G V K TG AIK + + E+ ++ LDHPN
Sbjct: 6 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPN 65
Query: 120 VVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRAL 179
++ L F +K YL + + E +I + Q+ + + Q+
Sbjct: 66 IMKLYEFF---EDKRNYYLVMEVYRGGELFDEII-----LRQKFSEVDAAVIMKQVLSGT 117
Query: 180 AYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISYICSRYYRAPE 237
Y+H + HRD+KP+NLL+ + +K+ DFG + G + + YY APE
Sbjct: 118 TYLHKH-NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPE 176
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 297
++ +Y D+WS G +L LL G P F G++ DQ ++L + + P
Sbjct: 177 VL--RKKYDEKCDVWSCGVILYILLCGYPPFGGQT--DQ-----EILKRVEKGKFSFDPP 227
Query: 298 NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
++T+ + EA LV +L Y P+ R +A +A+
Sbjct: 228 DWTQ------------------VSDEAKQLVKLMLTYEPSKRISAEEAL 258
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 108/236 (45%), Gaps = 39/236 (16%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQ-------DKRYKNRELQTMRLLDHP 118
Y +V+G G+FG V + T + A+K + + D + E M + P
Sbjct: 75 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 134
Query: 119 NVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRA 178
VV L + F +D+ YL +V+EY+P + +Y + ++ + + Y ++ A
Sbjct: 135 WVVQLFYAF-----QDDRYLYMVMEYMPGGDLVNLMSNYDVPEK----WARFYTAEVVLA 185
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVK----------GEPNISYI 228
L IH ++G HRD+KP N+L++ H LKL DFG+ + K G P+
Sbjct: 186 LDAIH-SMGFIHRDVKPDNMLLDKSGH-LKLADFGTCMKMNKEGMVRCDTAVGTPD---- 239
Query: 229 CSRYYRAPELI---FGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 281
Y +PE++ G Y D WS G L E+L+G F +S V +I+
Sbjct: 240 ----YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 291
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 112/228 (49%), Gaps = 23/228 (10%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQ-------DKRYKNRELQTMRLLDHP 118
Y +V+G G+FG V + + + A+K + + D + E M + P
Sbjct: 76 DYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 135
Query: 119 NVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRA 178
VV L C F +D+ YL +V+EY+P + +Y + ++ + K Y ++ A
Sbjct: 136 WVVQL-FCAF----QDDKYLYMVMEYMPGGDLVNLMSNYDVPEK----WAKFYTAEVVLA 186
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSA-KVLVKGEPNI-SYICSRYYRAP 236
L IH ++G+ HRD+KP N+L++ H H LKL DFG+ K+ G + + + + Y +P
Sbjct: 187 LDAIH-SMGLIHRDVKPDNMLLDKHGH-LKLADFGTCMKMDETGMVHCDTAVGTPDYISP 244
Query: 237 ELI---FGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 281
E++ G Y D WS G L E+L+G F +S V +I+
Sbjct: 245 EVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIM 292
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 94/198 (47%), Gaps = 17/198 (8%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK---NRELQTMRLLDHPNVVSLKHCFFS 129
+G G+FGV + ++ E VA+K + + ++ RE+ R L HPN+V K +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 130 TTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIG 187
T +L +V+EY E R+ + R + +F Q+ ++Y H +
Sbjct: 87 PT-----HLAIVMEYASGGELFERICN-----AGRFSEDEARFFFQQLISGVSYCH-AMQ 135
Query: 188 VCHRDIKPQNLLVNPH-THQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 246
VCHRD+K +N L++ +LK+C FG +K V + + Y APE++
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKEYDG 195
Query: 247 AAIDIWSAGCVLAELLLG 264
D+WS G L +L+G
Sbjct: 196 KVADVWSCGVTLYVMLVG 213
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 111/221 (50%), Gaps = 25/221 (11%)
Query: 59 GQPKQTISYMAERV-VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNR------ELQT 111
G P+ SY+ + +G GS G+V A +G+ VA+KK+ D R + R E+
Sbjct: 20 GDPR---SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVI 74
Query: 112 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY 171
MR H NVV + + + DEL++ V+E++ I H +M++ +
Sbjct: 75 MRDYQHENVVEMYNSYLVG---DELWV--VMEFLEGGALTDIVTHTRMNEEQ----IAAV 125
Query: 172 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC-S 230
+ +AL+ +H GV HRDIK ++L+ H ++KL DFG + K P + +
Sbjct: 126 CLAVLQALSVLHAQ-GVIHRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGT 183
Query: 231 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGE 271
Y+ APELI Y +DIWS G ++ E++ G+P + E
Sbjct: 184 PYWMAPELI-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 223
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 117/266 (43%), Gaps = 30/266 (11%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQD-----KRYKNRELQTMRLLDHPNVV 121
Y V+G G+F V A+ T + VAIK + ++ + E+ + + HPN+V
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAY 181
+L + S LYL + L E R+++ + + + +Q+ A+ Y
Sbjct: 80 ALDDIYESGGH---LYLIMQLVSGGELFDRIVEKGFYTERDASRL-----IFQVLDAVKY 131
Query: 182 IHNTIGVCHRDIKPQNLLVNP--HTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 239
+H+ +G+ HRD+KP+NLL ++ + DFG +K+ G + + Y APE +
Sbjct: 132 LHD-LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPE-V 189
Query: 240 FGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKV---LGTPTREEIKCMN 296
Y+ A+D WS G + LL G P F E+ +I+K +P ++I
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSA 249
Query: 297 PNY----------TEFKFPQIKAHPW 312
++ F Q HPW
Sbjct: 250 KDFIRHLMEKDPEKRFTCEQALQHPW 275
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 124/277 (44%), Gaps = 50/277 (18%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 123
R +G G FG V+ A+ + +A+K + + + K RE++ L HPN++ +
Sbjct: 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 79
Query: 124 KHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
+ F D + L+LE+ P +++ ++ H + ++ +++ ++ AL Y
Sbjct: 80 YNYF-----HDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME----ELADALHYC 130
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H V HRDIKP+NLL+ + +LK+ DFG + V + Y PE+I G
Sbjct: 131 HER-KVIHRDIKPENLLMG-YKGELKIADFGWS-VHAPSLRRRXMCGTLDYLPPEMIEGK 187
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 302
T + +D+W AG + E L+G P F S + I+ V +
Sbjct: 188 T-HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV-----------------DL 229
Query: 303 KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
KFP + + DL+S+LL+Y P R
Sbjct: 230 KFPPF------------LSDGSKDLISKLLRYHPPQR 254
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 30/266 (11%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIK----KVLQDKRYK-NRELQTMRLLDHPNVV 121
Y V+G G+F V A+ T + VAIK + L+ K E+ + + HPN+V
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAY 181
+L + S LYL + L E R+++ + + + +Q+ A+ Y
Sbjct: 80 ALDDIYESGGH---LYLIMQLVSGGELFDRIVEKGFYTERDASRL-----IFQVLDAVKY 131
Query: 182 IHNTIGVCHRDIKPQNLLVNP--HTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 239
+H+ +G+ HRD+KP+NLL ++ + DFG +K+ G + + Y APE +
Sbjct: 132 LHD-LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPE-V 189
Query: 240 FGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKV---LGTPTREEIKCMN 296
Y+ A+D WS G + LL G P F E+ +I+K +P ++I
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSA 249
Query: 297 PNY----------TEFKFPQIKAHPW 312
++ F Q HPW
Sbjct: 250 KDFIRHLMEKDPEKRFTCEQALQHPW 275
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 128/295 (43%), Gaps = 47/295 (15%)
Query: 63 QTISYMAERV--VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNR-------ELQTMR 113
Q +S +RV +G G++G V K TG AIK + + E+ ++
Sbjct: 17 QGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLK 76
Query: 114 LLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFY 173
LDHPN++ L F +K YL + + E +I + Q+ + +
Sbjct: 77 QLDHPNIMKLYEFF---EDKRNYYLVMEVYRGGELFDEII-----LRQKFSEVDAAVIMK 128
Query: 174 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISYICSR 231
Q+ Y+H + HRD+KP+NLL+ + +K+ DFG + G + +
Sbjct: 129 QVLSGTTYLHKH-NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTA 187
Query: 232 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE 291
YY APE++ +Y D+WS G +L LL G P F G++ DQ ++L + +
Sbjct: 188 YYIAPEVL--RKKYDEKCDVWSCGVILYILLCGYPPFGGQT--DQ-----EILKRVEKGK 238
Query: 292 IKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
P++T+ + EA LV +L Y P+ R +A +A+
Sbjct: 239 FSFDPPDWTQ------------------VSDEAKQLVKLMLTYEPSKRISAEEAL 275
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 30/266 (11%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIK----KVLQDKRYK-NRELQTMRLLDHPNVV 121
Y V+G G+F V A+ T + VAIK + L+ K E+ + + HPN+V
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAY 181
+L + S LYL + L E R+++ + + + +Q+ A+ Y
Sbjct: 80 ALDDIYESGGH---LYLIMQLVSGGELFDRIVEKGFYTERDASRL-----IFQVLDAVKY 131
Query: 182 IHNTIGVCHRDIKPQNLLVNP--HTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 239
+H+ +G+ HRD+KP+NLL ++ + DFG +K+ G + + Y APE +
Sbjct: 132 LHD-LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPE-V 189
Query: 240 FGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKV---LGTPTREEIKCMN 296
Y+ A+D WS G + LL G P F E+ +I+K +P ++I
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSA 249
Query: 297 PNY----------TEFKFPQIKAHPW 312
++ F Q HPW
Sbjct: 250 KDFIRHLMEKDPEKRFTCEQALQHPW 275
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 130/290 (44%), Gaps = 50/290 (17%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGE-----AVAIKKVLQDKRYKNRELQTMRLLDHPNVV 121
YM +G G FG+V +C+ET A +K D+ +E+ + + H N++
Sbjct: 7 YMIAEDLGRGEFGIVH--RCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNIL 64
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRAL 179
L F S E L ++ E++ + R+ +++++R + YV +Q+C AL
Sbjct: 65 HLHESFESMEE-----LVMIFEFISGLDIFERINTSAFELNEREIVSYV----HQVCEAL 115
Query: 180 AYIHNTIGVCHRDIKPQNLLVNP-HTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 238
++H+ + H DI+P+N++ + +K+ +FG A+ L G+ + Y APE
Sbjct: 116 QFLHSH-NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPE- 173
Query: 239 IFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPN 298
+ + A D+WS G ++ LL G F E+ Q++E I MN
Sbjct: 174 VHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN-QQIIENI-------------MNAE 219
Query: 299 YT--EFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
YT E F +I EA+D V RLL R TA +A+
Sbjct: 220 YTFDEEAFKEI-------------SIEAMDFVDRLLVKERKSRMTASEAL 256
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 124/277 (44%), Gaps = 50/277 (18%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 123
R +G G FG V+ A+ + +A+K + + + K RE++ L HPN++ +
Sbjct: 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 79
Query: 124 KHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
+ F D + L+LE+ P +++ ++ H + ++ +++ ++ AL Y
Sbjct: 80 YNYF-----HDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME----ELADALHYC 130
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 242
H V HRDIKP+NLL+ + +LK+ DFG + V + Y PE+I G
Sbjct: 131 HER-KVIHRDIKPENLLMG-YKGELKIADFGWS-VHAPSLRRRXMCGTLDYLPPEMIEGK 187
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 302
T + +D+W AG + E L+G P F S + I+ V +
Sbjct: 188 T-HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV-----------------DL 229
Query: 303 KFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
KFP + + DL+S+LL+Y P R
Sbjct: 230 KFPPF------------LSDGSKDLISKLLRYHPPQR 254
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 130/285 (45%), Gaps = 50/285 (17%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLK 124
+ +G G++G V A T EAVA+K ++ KR + +E+ ++L+H NVV
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVK-- 69
Query: 125 HCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F+ + + L LEY E R+ + MP + +F+Q+ + Y+
Sbjct: 70 --FYGHRREGNIQY-LFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLV--KGEPNISYICSRY-YRAPELI 239
H IG+ HRDIKP+NLL++ LK+ DFG A V E ++ +C Y APEL+
Sbjct: 122 HG-IGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 240 FGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY 299
+ +D+WS G VL +L G+ P + D E Y
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------Y 218
Query: 300 TEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFD 344
+++K + +PW KI + L+ ++L +P+ R T D
Sbjct: 219 SDWKEKKTYLNPWKKIDSAPLA-----LLHKILVENPSARITIPD 258
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 130/285 (45%), Gaps = 50/285 (17%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLK 124
+ +G G++G V A T EAVA+K ++ KR + +E+ ++L+H NVV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVK-- 68
Query: 125 HCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F+ + + L LEY E R+ + MP + +F+Q+ + Y+
Sbjct: 69 --FYGHRREGNIQY-LFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLV--KGEPNISYICSRY-YRAPELI 239
H IG+ HRDIKP+NLL++ LK+ DFG A V E ++ +C Y APEL+
Sbjct: 121 HG-IGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 240 FGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY 299
+ +D+WS G VL +L G+ P + D E Y
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------Y 217
Query: 300 TEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFD 344
+++K + +PW KI + L+ ++L +P+ R T D
Sbjct: 218 SDWKEKKTYLNPWKKIDSAPLA-----LLHKILVENPSARITIPD 257
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 120/283 (42%), Gaps = 47/283 (16%)
Query: 73 VGHGSFGVVFQAKCLETGEA-VAIKKVLQ-----DKRYKNRELQTMRLLDHPNVVSLKHC 126
+G G+FGVV +C+E V + K + DK E+ M L HP +++L
Sbjct: 59 LGSGAFGVVH--RCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDA 116
Query: 127 FFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN 184
F +D+ + L+LE++ E R+ YKMS+ + Y++ Q C L ++H
Sbjct: 117 F-----EDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMR----QACEGLKHMHE 167
Query: 185 TIGVCHRDIKPQNLLV-NPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGAT 243
+ H DIKP+N++ +K+ DFG A L E + + APE++
Sbjct: 168 H-SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIV-DRE 225
Query: 244 EYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 303
D+W+ G + LL G F GE ++ L + +K + + E
Sbjct: 226 PVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETL------------QNVKRCDWEFDEDA 273
Query: 304 FPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
F + PEA D + LLQ P R T DA+
Sbjct: 274 FSSVS-------------PEAKDFIKNLLQKEPRKRLTVHDAL 303
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 121/255 (47%), Gaps = 29/255 (11%)
Query: 42 NGTEAGHIIVTTIGGKNGQPK-QTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQ 100
+G + G++ TIGG+ Q + + + E +G G+ G V++ + +TG +A+K++
Sbjct: 6 SGKQTGYL---TIGGQRYQAEINDLENLGE--MGSGTCGQVWKMRFRKTGHVIAVKQM-- 58
Query: 101 DKRYKNRELQTMRLLDHPNVVSLKH-------CFFSTTEKDELYLNLVLEYVPETVHRVI 153
+R N+E + R+L +VV H CF + ++++ +E + ++
Sbjct: 59 -RRSGNKE-ENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFI--AMELMGTCAEKLK 114
Query: 154 KHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFG 213
K +M +P + I +AL Y+ GV HRD+KP N+L++ Q+KLCDFG
Sbjct: 115 K---RMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLD-ERGQIKLCDFG 170
Query: 214 SAKVLVKGEPNISYICSRYYRAPELIF----GATEYTAAIDIWSAGCVLAELLLGQPLFP 269
+ LV + Y APE I +Y D+WS G L EL GQ FP
Sbjct: 171 ISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ--FP 228
Query: 270 GESGVDQLVEIIKVL 284
++ + KVL
Sbjct: 229 YKNCKTDFEVLTKVL 243
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 107/215 (49%), Gaps = 28/215 (13%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN-------RELQTMRLLDHPNVVSLKH 125
+G G V+ A+ VAIK + R K RE+ L H N+VS+
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSM-- 76
Query: 126 CFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN 184
E+D+ Y LV+EY+ T+ I+ H +S + + QI + + H+
Sbjct: 77 --IDVDEEDDCYY-LVMEYIEGPTLSEYIESHGPLSVDTAINFTN----QILDGIKHAHD 129
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNIS----YICSRYYRAPELIF 240
+ + HRDIKPQN+L++ + LK+ DFG AK L E +++ + + Y +PE
Sbjct: 130 -MRIVHRDIKPQNILIDSNK-TLKIFDFGIAKAL--SETSLTQTNHVLGTVQYFSPEQAK 185
Query: 241 G-ATEYTAAIDIWSAGCVLAELLLGQPLFPGESGV 274
G AT+ DI+S G VL E+L+G+P F GE+ V
Sbjct: 186 GEATD--ECTDIYSIGIVLYEMLVGEPPFNGETAV 218
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 130/285 (45%), Gaps = 50/285 (17%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLK 124
+ +G G++G V A T EAVA+K ++ KR + +E+ ++L+H NVV
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVK-- 69
Query: 125 HCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F+ + + L LEY E R+ + MP + +F+Q+ + Y+
Sbjct: 70 --FYGHRREGNIQY-LFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLV--KGEPNISYICSRY-YRAPELI 239
H IG+ HRDIKP+NLL++ LK+ DFG A V E ++ +C Y APEL+
Sbjct: 122 HG-IGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 240 FGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY 299
+ +D+WS G VL +L G+ P + D E Y
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------Y 218
Query: 300 TEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFD 344
+++K + +PW KI + L+ ++L +P+ R T D
Sbjct: 219 SDWKEKKTYLNPWKKIDSAPLA-----LLHKILVENPSARITIPD 258
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 130/285 (45%), Gaps = 50/285 (17%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLK 124
+ +G G++G V A T EAVA+K ++ KR + +E+ ++L+H NVV
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVK-- 69
Query: 125 HCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F+ + + L LEY E R+ + MP + +F+Q+ + Y+
Sbjct: 70 --FYGHRREGNIQY-LFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLV--KGEPNISYICSRY-YRAPELI 239
H IG+ HRDIKP+NLL++ LK+ DFG A V E ++ +C Y APEL+
Sbjct: 122 HG-IGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 240 FGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY 299
+ +D+WS G VL +L G+ P + D E Y
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------Y 218
Query: 300 TEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFD 344
+++K + +PW KI + L+ ++L +P+ R T D
Sbjct: 219 SDWKEKKTYLNPWKKIDSAPLA-----LLHKILVENPSARITIPD 258
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 130/285 (45%), Gaps = 50/285 (17%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLK 124
+ +G G++G V A T EAVA+K ++ KR + +E+ ++L+H NVV
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVK-- 69
Query: 125 HCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F+ + + L LEY E R+ + MP + +F+Q+ + Y+
Sbjct: 70 --FYGHRREGNIQY-LFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLV--KGEPNISYICSRY-YRAPELI 239
H IG+ HRDIKP+NLL++ LK+ DFG A V E ++ +C Y APEL+
Sbjct: 122 HG-IGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 240 FGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY 299
+ +D+WS G VL +L G+ P + D E Y
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------Y 218
Query: 300 TEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFD 344
+++K + +PW KI + L+ ++L +P+ R T D
Sbjct: 219 SDWKEKKTYLNPWKKIDSAPLA-----LLHKILVENPSARITIPD 258
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 131/285 (45%), Gaps = 50/285 (17%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLK 124
+ +G G++G V A T EAVA+K ++ KR + +E+ ++L+H NVV
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVK-- 69
Query: 125 HCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F+ + + L LEY E R+ + MP + +F+Q+ + Y+
Sbjct: 70 --FYGHRREGNIQY-LFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLV--KGEPNISYICSRY-YRAPELI 239
H IG+ HRDIKP+NLL++ + LK+ DFG A V E ++ +C Y APEL+
Sbjct: 122 HG-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 240 FGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY 299
+ +D+WS G VL +L G+ P + D E Y
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------Y 218
Query: 300 TEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFD 344
+++K + +PW KI + L+ ++L +P+ R T D
Sbjct: 219 SDWKEKKTYLNPWKKIDSAPLA-----LLHKILVENPSARITIPD 258
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 131/285 (45%), Gaps = 50/285 (17%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLK 124
+ +G G++G V A T EAVA+K ++ KR + +E+ ++L+H NVV
Sbjct: 11 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVK-- 67
Query: 125 HCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F+ + + L LEY E R+ + MP + +F+Q+ + Y+
Sbjct: 68 --FYGHRREGNIQY-LFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYL 119
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLV--KGEPNISYICSRY-YRAPELI 239
H IG+ HRDIKP+NLL++ + LK+ DFG A V E ++ +C Y APEL+
Sbjct: 120 HG-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 177
Query: 240 FGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY 299
+ +D+WS G VL +L G+ P + D E Y
Sbjct: 178 KRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------Y 216
Query: 300 TEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFD 344
+++K + +PW KI + L+ ++L +P+ R T D
Sbjct: 217 SDWKEKKTYLNPWKKIDSAPLA-----LLHKILVENPSARITIPD 256
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 131/285 (45%), Gaps = 50/285 (17%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLK 124
+ +G G++G V A T EAVA+K ++ KR + +E+ ++L+H NVV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVK-- 68
Query: 125 HCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F+ + + L LEY E R+ + MP + +F+Q+ + Y+
Sbjct: 69 --FYGHRREGNIQY-LFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLV--KGEPNISYICSRY-YRAPELI 239
H IG+ HRDIKP+NLL++ + LK+ DFG A V E ++ +C Y APEL+
Sbjct: 121 HG-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 240 FGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY 299
+ +D+WS G VL +L G+ P + D E Y
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------Y 217
Query: 300 TEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFD 344
+++K + +PW KI + L+ ++L +P+ R T D
Sbjct: 218 SDWKEKKTYLNPWKKIDSAPLA-----LLHKILVENPSARITIPD 257
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 131/285 (45%), Gaps = 50/285 (17%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLK 124
+ +G G++G V A T EAVA+K ++ KR + +E+ ++L+H NVV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVK-- 68
Query: 125 HCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F+ + + L LEY E R+ + MP + +F+Q+ + Y+
Sbjct: 69 --FYGHRREGNIQY-LFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLV--KGEPNISYICSRY-YRAPELI 239
H IG+ HRDIKP+NLL++ + LK+ DFG A V E ++ +C Y APEL+
Sbjct: 121 HG-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 240 FGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY 299
+ +D+WS G VL +L G+ P + D E Y
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------Y 217
Query: 300 TEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFD 344
+++K + +PW KI + L+ ++L +P+ R T D
Sbjct: 218 SDWKEKKTYLNPWKKIDSAPLA-----LLHKILVENPSARITIPD 257
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 131/285 (45%), Gaps = 50/285 (17%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLK 124
+ +G G++G V A T EAVA+K ++ KR + +E+ ++L+H NVV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVK-- 68
Query: 125 HCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F+ + + L LEY E R+ + MP + +F+Q+ + Y+
Sbjct: 69 --FYGHRREGNIQY-LFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLV--KGEPNISYICSRY-YRAPELI 239
H IG+ HRDIKP+NLL++ + LK+ DFG A V E ++ +C Y APEL+
Sbjct: 121 HG-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 240 FGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY 299
+ +D+WS G VL +L G+ P + D E Y
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------Y 217
Query: 300 TEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFD 344
+++K + +PW KI + L+ ++L +P+ R T D
Sbjct: 218 SDWKEKKTYLNPWKKIDSAPLA-----LLHKILVENPSARITIPD 257
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 128/284 (45%), Gaps = 48/284 (16%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-----NRELQTMRLLDHPNVVSLKH 125
+ +G G++G V A T EAVA+K V + +E+ ++L+H NVV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK--- 68
Query: 126 CFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
F+ + + L LEY E R+ + MP + +F+Q+ + Y+H
Sbjct: 69 -FYGHRREGNIQY-LFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLV--KGEPNISYICSRY-YRAPELIF 240
IG+ HRDIKP+NLL++ + LK+ DFG A V E ++ +C Y APEL+
Sbjct: 122 G-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 241 GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 300
+ +D+WS G VL +L G+ P + D E Y+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YS 218
Query: 301 EFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFD 344
++K + +PW KI + L+ ++L +P+ R T D
Sbjct: 219 DWKEKKTYLNPWKKIDSAPLA-----LLHKILVENPSARITIPD 257
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 131/285 (45%), Gaps = 50/285 (17%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLK 124
+ +G G++G V A T EAVA+K ++ KR + +E+ ++L+H NVV
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVK-- 69
Query: 125 HCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F+ + + L LEY E R+ + MP + +F+Q+ + Y+
Sbjct: 70 --FYGHRREGNIQY-LFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLV--KGEPNISYICSRY-YRAPELI 239
H IG+ HRDIKP+NLL++ + LK+ DFG A V E ++ +C Y APEL+
Sbjct: 122 HG-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 240 FGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY 299
+ +D+WS G VL +L G+ P + D E Y
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------Y 218
Query: 300 TEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFD 344
+++K + +PW KI + L+ ++L +P+ R T D
Sbjct: 219 SDWKEKKTYLNPWKKIDSAPLA-----LLHKILVENPSARITIPD 258
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 128/284 (45%), Gaps = 48/284 (16%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-----NRELQTMRLLDHPNVVSLKH 125
+ +G G++G V A T EAVA+K V + +E+ ++L+H NVV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK--- 68
Query: 126 CFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
F+ + + L LEY E R+ + MP + +F+Q+ + Y+H
Sbjct: 69 -FYGHRREGNIQY-LFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLV--KGEPNISYICSRY-YRAPELIF 240
IG+ HRDIKP+NLL++ + LK+ DFG A V E ++ +C Y APEL+
Sbjct: 122 G-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 241 GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 300
+ +D+WS G VL +L G+ P + D E Y+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YS 218
Query: 301 EFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFD 344
++K + +PW KI + L+ ++L +P+ R T D
Sbjct: 219 DWKEKKTYLNPWKKIDSAPLA-----LLHKILVENPSARITIPD 257
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 106/218 (48%), Gaps = 19/218 (8%)
Query: 72 VVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQ-------TMRLLDHPNVVSLK 124
V+G GSFG V A T E AIK + +D ++ +++ + LLD P ++
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQL 85
Query: 125 HCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN 184
H F T ++ L V+EYV + +H + + Y +I L ++H
Sbjct: 86 HSCFQTVDR----LYFVMEYVNGGD---LMYHIQQVGKFKEPQAVFYAAEISIGLFFLHK 138
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKV-LVKGEPNISYICSRYYRAPELIFGAT 243
G+ +RD+K N++++ H +K+ DFG K ++ G + + Y APE+I
Sbjct: 139 R-GIIYRDLKLDNVMLDSEGH-IKIADFGMCKEHMMDGVTTREFCGTPDYIAPEII-AYQ 195
Query: 244 EYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 281
Y ++D W+ G +L E+L GQP F GE D+L + I
Sbjct: 196 PYGKSVDWWAYGVLLYEMLAGQPPFDGEDE-DELFQSI 232
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 105/205 (51%), Gaps = 26/205 (12%)
Query: 73 VGHGSFGVV----FQAKCLETGEAVAIKKVLQDK----RYKNRELQTMRLLDHPNVVSLK 124
+G G+FG V + TGE VA+KK+ R RE++ ++ L H N+V K
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 125 HCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN 184
+S ++ L L++EY+P R + K +R+ I + Y QIC+ + Y+
Sbjct: 79 GVCYSAGRRN---LKLIMEYLPYGSLR--DYLQKHKERIDHIKLLQYTSQICKGMEYL-G 132
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKG-------EPNISYICSRYYRAPE 237
T HR++ +N+LV + +++K+ DFG KVL + EP S I ++ APE
Sbjct: 133 TKRYIHRNLATRNILVE-NENRVKIGDFGLTKVLPQDKEYYKVKEPGESPI---FWYAPE 188
Query: 238 LIFGATEYTAAIDIWSAGCVLAELL 262
+ ++++ A D+WS G VL EL
Sbjct: 189 SL-TESKFSVASDVWSFGVVLYELF 212
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 134/301 (44%), Gaps = 40/301 (13%)
Query: 51 VTTIGGKNGQPKQTISYMAERV-----VGHGSFGVVFQAKCLETGEAVAIKKVLQ--DKR 103
+ + G P+Q + AE + +G G++G V + +G+ +A+K++ D++
Sbjct: 3 IESSGKLKISPEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEK 62
Query: 104 YKNRELQ----TMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYK- 158
+ + L MR D P +V F + + +E + + + K+ Y
Sbjct: 63 EQKQLLMDLDVVMRSSDCPYIVQFYGALFREGD-----CWICMELMSTSFDKFYKYVYSV 117
Query: 159 MSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL 218
+ +P + +AL ++ + + HRDIKP N+L++ + +KLCDFG + L
Sbjct: 118 LDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLD-RSGNIKLCDFGISGQL 176
Query: 219 VKGEPNISYICSRYYRAPELIFGATE---YTAAIDIWSAGCVLAELLLGQPLFPGESGV- 274
V R Y APE I + Y D+WS G L EL G+ +P + V
Sbjct: 177 VDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF 236
Query: 275 DQLVEIIKVLGTP---TREEIKCMNPNYTEF-------------KFPQIKAHPWHKIFQK 318
DQL +++K G P + E + +P++ F K+ ++ HP+ ++++
Sbjct: 237 DQLTQVVK--GDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYEE 294
Query: 319 R 319
R
Sbjct: 295 R 295
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 146/304 (48%), Gaps = 64/304 (21%)
Query: 68 MAERVVGHGSFG-VVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLL----DHPNVVS 122
++E+++G+GS G VVFQ G VA+K++L D + + L ++LL DHPNV+
Sbjct: 36 VSEKILGYGSSGTVVFQGSF--QGRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVIR 91
Query: 123 LKHCFFSTTEKDELYL-----NLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICR 177
+C S T LY+ NL L+ + E+ + V + K+ + I + QI
Sbjct: 92 Y-YC--SETTDRFLYIALELCNLNLQDLVESKN-VSDENLKLQKEYNPISL---LRQIAS 144
Query: 178 ALAYIHNTIGVCHRDIKPQNLLVNPHTH------------QLKLCDFGSAKVLVKGEPNI 225
+A++H ++ + HRD+KPQN+LV+ + ++ + DFG K L G+
Sbjct: 145 GVAHLH-SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 203
Query: 226 SYIC-----SRYYRAPELIFGATE--YTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLV 278
+ +RAPEL+ +T+ T +IDI+S GCV +L + P +
Sbjct: 204 RXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFY-YILSKGKHPFGDKYSRES 262
Query: 279 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNL 338
II+ G + +E+KC++ + + EA DL+S+++ + P
Sbjct: 263 NIIR--GIFSLDEMKCLH--------------------DRSLIAEATDLISQMIDHDPLK 300
Query: 339 RSTA 342
R TA
Sbjct: 301 RPTA 304
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 146/304 (48%), Gaps = 64/304 (21%)
Query: 68 MAERVVGHGSFG-VVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLL----DHPNVVS 122
++E+++G+GS G VVFQ G VA+K++L D + + L ++LL DHPNV+
Sbjct: 36 VSEKILGYGSSGTVVFQGSF--QGRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVIR 91
Query: 123 LKHCFFSTTEKDELYL-----NLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICR 177
+C S T LY+ NL L+ + E+ + V + K+ + I + QI
Sbjct: 92 Y-YC--SETTDRFLYIALELCNLNLQDLVESKN-VSDENLKLQKEYNPISL---LRQIAS 144
Query: 178 ALAYIHNTIGVCHRDIKPQNLLVNPHTH------------QLKLCDFGSAKVLVKGEPNI 225
+A++H ++ + HRD+KPQN+LV+ + ++ + DFG K L G+
Sbjct: 145 GVAHLH-SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 203
Query: 226 SYIC-----SRYYRAPELIFGATE--YTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLV 278
+ +RAPEL+ +T+ T +IDI+S GCV +L + P +
Sbjct: 204 RXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFY-YILSKGKHPFGDKYSRES 262
Query: 279 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNL 338
II+ G + +E+KC++ + + EA DL+S+++ + P
Sbjct: 263 NIIR--GIFSLDEMKCLH--------------------DRSLIAEATDLISQMIDHDPLK 300
Query: 339 RSTA 342
R TA
Sbjct: 301 RPTA 304
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 109/214 (50%), Gaps = 37/214 (17%)
Query: 72 VVGHGSFGVVFQAKCLETGEAVAIKKVL----QDKRYKNRELQTMRLLDHPNVVSLKHCF 127
V+G G FG + ETGE + +K+++ + +R +E++ MR L+HPNV+ F
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLK----F 72
Query: 128 FSTTEKDELYLNLVLEYVP-ETVHRVIK---HHYKMSQRMPLIYVKLYFYQICRALAYIH 183
KD+ LN + EY+ T+ +IK Y SQR+ + I +AY+H
Sbjct: 73 IGVLYKDK-RLNFITEYIKGGTLRGIIKSMDSQYPWSQRVS------FAKDIASGMAYLH 125
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLV--KGEP-------------NISYI 228
++ + HRD+ N LV + + + + DFG A+++V K +P + +
Sbjct: 126 -SMNIIHRDLNSHNCLVRENKNVV-VADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVV 183
Query: 229 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELL 262
+ Y+ APE+I G + Y +D++S G VL E++
Sbjct: 184 GNPYWMAPEMINGRS-YDEKVDVFSFGIVLCEII 216
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 106/205 (51%), Gaps = 20/205 (9%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--RELQTMRLLDHPNVVSL 123
+ +G GSFG V K E+G A+K KV++ K+ ++ E + ++ ++ P +V L
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 127
Query: 124 KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
+ F KD L +V+EYV + H + R + + Y QI Y+H
Sbjct: 128 EFSF-----KDNSNLYMVMEYV---AGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 179
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGAT 243
++ + +RD+KP+NLL++ + +++ DFG AK VKG + + Y APE+I +
Sbjct: 180 -SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKG-ATWTLCGTPEYLAPEIIL-SK 234
Query: 244 EYTAAIDIWSAGCVLAELLLGQPLF 268
Y A+D W+ G ++ E+ G P F
Sbjct: 235 GYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 93/198 (46%), Gaps = 17/198 (8%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK---NRELQTMRLLDHPNVVSLKHCFFS 129
+G G+FGV + + E VA+K + + ++ RE+ R L HPN+V K +
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 130 TTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIG 187
T +L +V+EY E R+ + R + +F Q+ ++Y H +
Sbjct: 87 PT-----HLAIVMEYASGGELFERICN-----AGRFSEDEARFFFQQLISGVSYAH-AMQ 135
Query: 188 VCHRDIKPQNLLVNPH-THQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 246
V HRD+K +N L++ +LK+ DFG +K V S + + Y APE++
Sbjct: 136 VAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKEYDG 195
Query: 247 AAIDIWSAGCVLAELLLG 264
D+WS G L +L+G
Sbjct: 196 KVADVWSCGVTLYVMLVG 213
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 22/206 (10%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--RELQTMRLLDHPNVVSL 123
+ +G GSFG V K E+G A+K KV++ K+ ++ E + ++ ++ P +V L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 124 KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
+ F KD L +V+EYV + H + R + + Y QI Y+H
Sbjct: 107 EFSF-----KDNSNLYMVMEYV---AGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGA 242
++ + +RD+KP+NLL++ + +++ DFG AK VKG +C Y APE+I +
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIIL-S 212
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLF 268
Y A+D W+ G ++ E+ G P F
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 22/206 (10%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--RELQTMRLLDHPNVVSL 123
+ +G GSFG V K E+G A+K KV++ K+ ++ E + ++ ++ P +V L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 124 KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
+ F KD L +V+EYV + H + R + + Y QI Y+H
Sbjct: 107 EFSF-----KDNSNLYMVMEYV---AGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGA 242
++ + +RD+KP+NLL++ + +++ DFG AK VKG +C Y APE+I +
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIIL-S 212
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLF 268
Y A+D W+ G ++ E+ G P F
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 129/285 (45%), Gaps = 48/285 (16%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKV------LQDKRYKNRELQTMRLLDHPNVVSLKHC 126
+G G+F VV + + G+ A K + +D + RE + RLL HPN+V L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD- 88
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVI-KHHYKMSQRMPLIYVKLYFYQICRALAYIHNT 185
S +E+ YL L E ++ + +Y + I QI A+ + H
Sbjct: 89 --SISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQ------QILEAVLHCHQ- 139
Query: 186 IGVCHRDIKPQNLLVNPHTH--QLKLCDFGSAKVLVKGEPN--ISYICSRYYRAPELIFG 241
+GV HRD+KP+NLL+ +KL DFG A + V+GE + + Y +PE +
Sbjct: 140 MGVVHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSPE-VLR 197
Query: 242 ATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTE 301
Y +D+W+ G +L LL+G P F E +L + IK
Sbjct: 198 KDPYGKPVDLWACGVILYILLVGYPPFWDEDQ-HRLYQQIKA----------------GA 240
Query: 302 FKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
+ FP + W + PEA DL++++L +P+ R TA +A+
Sbjct: 241 YDFPSPE---WDTV-----TPEAKDLINKMLTINPSKRITAAEAL 277
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 22/206 (10%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--RELQTMRLLDHPNVVSL 123
+ +G GSFG V K E+G A+K KV++ K+ ++ E + ++ ++ P +V L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 124 KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
+ F KD L +V+EYV + H + R + + Y QI Y+H
Sbjct: 107 EFSF-----KDNSNLYMVMEYV---AGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGA 242
++ + +RD+KP+NLL++ + +++ DFG AK VKG +C Y APE+I +
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIIL-S 212
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLF 268
Y A+D W+ G ++ E+ G P F
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 22/206 (10%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--RELQTMRLLDHPNVVSL 123
+ +G GSFG V K E+G A+K KV++ K+ ++ E + ++ ++ P +V L
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 127
Query: 124 KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
+ F KD L +V+EYV + H + R + + Y QI Y+H
Sbjct: 128 EFSF-----KDNSNLYMVMEYV---AGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 179
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGA 242
++ + +RD+KP+NLL++ + +++ DFG AK VKG +C Y APE+I +
Sbjct: 180 -SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIIL-S 233
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLF 268
Y A+D W+ G ++ E+ G P F
Sbjct: 234 KGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 22/206 (10%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--RELQTMRLLDHPNVVSL 123
+ +G GSFG V K E+G A+K KV++ K+ ++ E + ++ ++ P +V L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 124 KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
+ F KD L +V+EYV + H + R + + Y QI Y+H
Sbjct: 107 EFSF-----KDNSNLYMVMEYV---AGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLH 158
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGA 242
++ + +RD+KP+NLL++ + +++ DFG AK VKG +C Y APE+I +
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIIL-S 212
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLF 268
Y A+D W+ G ++ E+ G P F
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 129/287 (44%), Gaps = 43/287 (14%)
Query: 60 QPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN--RELQTMRLLDH 117
QP++ + + +G GS+G V++A ETG+ VAIK+V + + +E+ M+ D
Sbjct: 26 QPEEVFDVLEK--LGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDS 83
Query: 118 PNVVSLKHCFFSTTEKDELYLNLVLEYV-PETVHRVIKHHYKMSQRMPLIYVKLYFYQIC 176
P+VV +F T+ L +V+EY +V +I+ K + +
Sbjct: 84 PHVVKYYGSYFKNTD-----LWIVMEYCGAGSVSDIIRLRNKTLTEDEIATI---LQSTL 135
Query: 177 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY-ICSRYYRA 235
+ L Y+H + HRDIK N+L+N H KL DFG A L + I + ++ A
Sbjct: 136 KGLEYLHFMRKI-HRDIKAGNILLNTEGHA-KLADFGVAGQLTDXMAKRNXVIGTPFWMA 193
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM 295
PE+I Y DIWS G E+ G+P + + + + I + PT
Sbjct: 194 PEVI-QEIGYNCVADIWSLGITAIEMAEGKPPY---ADIHPMRAIFMI---PT------- 239
Query: 296 NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTA 342
NP T F+ P++ W F D V + L SP R+TA
Sbjct: 240 NPPPT-FRKPEL----WSDNF--------TDFVKQCLVKSPEQRATA 273
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 22/206 (10%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--RELQTMRLLDHPNVVSL 123
+ +G GSFG V K E+G A+K KV++ K+ ++ E + ++ ++ P +V L
Sbjct: 48 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 124 KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
+ F KD L +V+EYV + H + R + + Y QI Y+H
Sbjct: 108 EFSF-----KDNSNLYMVMEYV---AGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGA 242
++ + +RD+KP+NLL++ + +++ DFG AK VKG +C Y APE+I +
Sbjct: 160 -SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIIL-S 213
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLF 268
Y A+D W+ G ++ E+ G P F
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 105/205 (51%), Gaps = 20/205 (9%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--RELQTMRLLDHPNVVSL 123
+ +G GSFG V K E+G A+K KV++ K+ ++ E + ++ ++ P +V L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 124 KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
+ F KD L +V+EYV + H + R + + Y QI Y+H
Sbjct: 107 EFSF-----KDNSNLYMVMEYV---AGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGAT 243
++ + +RD+KP+NLL++ + +++ DFG AK VKG + Y APE+I +
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR-TWXLAGTPEYLAPEIIL-SK 213
Query: 244 EYTAAIDIWSAGCVLAELLLGQPLF 268
Y A+D W+ G ++ E+ G P F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 22/206 (10%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--RELQTMRLLDHPNVVSL 123
+ +G GSFG V K E+G A+K KV++ K+ ++ E + ++ ++ P +V L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 124 KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
+ F KD L +V+EYV + H + R + + Y QI Y+H
Sbjct: 107 EFSF-----KDNSNLYMVMEYV---AGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGA 242
++ + +RD+KP+NLL++ + +++ DFG AK VKG +C Y APE+I +
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIIL-S 212
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLF 268
Y A+D W+ G ++ E+ G P F
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 22/206 (10%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--RELQTMRLLDHPNVVSL 123
+ +G GSFG V K E+G A+K KV++ K+ ++ E + ++ ++ P +V L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 124 KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
+ F KD L +V+EYV + H + R + + Y QI Y+H
Sbjct: 107 EFSF-----KDNSNLYMVMEYV---AGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGA 242
++ + +RD+KP+NLL++ + +++ DFG AK VKG +C Y APE+I +
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIIL-S 212
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLF 268
Y A+D W+ G ++ E+ G P F
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 127/284 (44%), Gaps = 48/284 (16%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-----NRELQTMRLLDHPNVVSLKH 125
+ +G G++G V A T EAVA+K V + +E+ +L+H NVV
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVK--- 69
Query: 126 CFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
F+ + + L LEY E R+ + MP + +F+Q+ + Y+H
Sbjct: 70 -FYGHRREGNIQY-LFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLV--KGEPNISYICSRY-YRAPELIF 240
IG+ HRDIKP+NLL++ + LK+ DFG A V E ++ +C Y APEL+
Sbjct: 123 G-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 241 GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 300
+ +D+WS G VL +L G+ P + D E Y+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YS 219
Query: 301 EFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFD 344
++K + +PW KI + L+ ++L +P+ R T D
Sbjct: 220 DWKEKKTYLNPWKKIDSAPLA-----LLHKILVENPSARITIPD 258
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 130/287 (45%), Gaps = 54/287 (18%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLK 124
+ +G G++G V A T EAVA+K ++ KR + +E+ ++L+H NVV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEIXINKMLNHENVVK-- 68
Query: 125 HCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F+ + + L LEY E R+ + MP + +F+Q+ + Y+
Sbjct: 69 --FYGHRREGNIQY-LFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY-----YRAPE 237
H IG+ HRDIKP+NLL++ + LK+ DFG A V N + ++ Y APE
Sbjct: 121 HG-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYN--NRERLLNKMXGTLPYVAPE 176
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 297
L+ + +D+WS G VL +L G+ P + D E
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE------------------ 216
Query: 298 NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFD 344
Y+++K + +PW KI + L+ ++L +P+ R T D
Sbjct: 217 -YSDWKEKKTYLNPWKKIDSAPLA-----LLHKILVENPSARITIPD 257
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 105/205 (51%), Gaps = 20/205 (9%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--RELQTMRLLDHPNVVSL 123
+ +G GSFG V K E+G A+K KV++ K+ ++ E + ++ ++ P +V L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 124 KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
+ F KD L +V+EYV + H + R + + Y QI Y+H
Sbjct: 107 EFSF-----KDNSNLYMVMEYV---AGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGAT 243
++ + +RD+KP+NLL++ + +++ DFG AK VKG + Y APE+I +
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR-TWXLXGTPEYLAPEIIL-SK 213
Query: 244 EYTAAIDIWSAGCVLAELLLGQPLF 268
Y A+D W+ G ++ E+ G P F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 130/287 (45%), Gaps = 54/287 (18%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLK 124
+ +G G++G V A T EAVA+K ++ KR + +E+ ++L+H NVV
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEIXINKMLNHENVVK-- 69
Query: 125 HCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F+ + + L LEY E R+ + MP + +F+Q+ + Y+
Sbjct: 70 --FYGHRREGNIQY-LFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY-----YRAPE 237
H IG+ HRDIKP+NLL++ + LK+ DFG A V N + ++ Y APE
Sbjct: 122 HG-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYN--NRERLLNKMXGTLPYVAPE 177
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 297
L+ + +D+WS G VL +L G+ P + D E
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE------------------ 217
Query: 298 NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFD 344
Y+++K + +PW KI + L+ ++L +P+ R T D
Sbjct: 218 -YSDWKEKKTYLNPWKKIDSAPLA-----LLHKILVENPSARITIPD 258
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 127/278 (45%), Gaps = 33/278 (11%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK-------NRELQTMRLLDHPNVVSL 123
R +G G FG V+ A+ ++ VA+K + + + K RE++ L HPN++ L
Sbjct: 29 RPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRL 88
Query: 124 KHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAY 181
+ F+ D + L+LEY P E + K QR I ++ AL Y
Sbjct: 89 YNYFY-----DRRRIYLILEYAPRGELYKELQKSCTFDEQRTATI-----MEELADALMY 138
Query: 182 IHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 241
H V HRDIKP+NLL+ +LK+ DFG + V + + Y PE+I G
Sbjct: 139 CHGK-KVIHRDIKPENLLLG-LKGELKIADFGWS-VHAPSLRRKTMCGTLDYLPPEMIEG 195
Query: 242 ATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKV-----LGTPTREE---IK 293
+ +D+W G + ELL+G P F S + I+KV PT + K
Sbjct: 196 RM-HNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPASVPTGAQDLISK 254
Query: 294 CMNPNYTE-FKFPQIKAHPWHKIFQKR-MPPEAVDLVS 329
+ N +E Q+ AHPW + +R +PP A+ V+
Sbjct: 255 LLRHNPSERLPLAQVSAHPWVRANSRRVLPPSALQSVA 292
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 128/288 (44%), Gaps = 45/288 (15%)
Query: 64 TISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTM-RLLDHPNVVS 122
T Y + +G GS+ V + T A+K + + KR E++ + R HPN+++
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIIT 80
Query: 123 LKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
LK + D Y+ +V E + E + ++++ + S+R + I + +
Sbjct: 81 LKDVY-----DDGKYVYVVTELMKGGELLDKILRQKF-FSERE----ASAVLFTITKTVE 130
Query: 181 YIHNTIGVCHRDIKPQNLLV-----NPHTHQLKLCDFGSAKVLVKGEPNISYIC-SRYYR 234
Y+H GV HRD+KP N+L NP + +++CDFG AK L + C + +
Sbjct: 131 YLHAQ-GVVHRDLKPSNILYVDESGNPES--IRICDFGFAKQLRAENGLLMTPCYTANFV 187
Query: 235 APELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 294
APE + Y AA DIWS G +L +L G F D EI+ +G+
Sbjct: 188 APE-VLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD-DTPEEILARIGSG------- 238
Query: 295 MNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTA 342
KF + W+ + A DLVS++L P+ R TA
Sbjct: 239 --------KF-SLSGGYWNSV-----SDTAKDLVSKMLHVDPHQRLTA 272
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 22/206 (10%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--RELQTMRLLDHPNVVSL 123
+ +G GSFG V K E+G A+K KV++ K+ ++ E + ++ ++ P +V L
Sbjct: 34 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 93
Query: 124 KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
+ F KD L +V+EYV + H + R + + Y QI Y+H
Sbjct: 94 EFSF-----KDNSNLYMVMEYV---AGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 145
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGA 242
++ + +RD+KP+NLL++ + +++ DFG AK VKG +C Y APE+I +
Sbjct: 146 -SLDLIYRDLKPENLLIDEQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIIL-S 199
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLF 268
Y A+D W+ G ++ E+ G P F
Sbjct: 200 KGYNKAVDWWALGVLIYEMAAGYPPF 225
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 22/206 (10%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--RELQTMRLLDHPNVVSL 123
+ +G GSFG V K E+G A+K KV++ K+ ++ E + ++ ++ P +V L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 124 KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
+ F KD L +V+EYV + H + R + + Y QI Y+H
Sbjct: 107 EFSF-----KDNSNLYMVMEYV---AGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGA 242
++ + +RD+KP+NLL++ + +++ DFG AK VKG +C Y APE+I +
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIIL-S 212
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLF 268
Y A+D W+ G ++ E+ G P F
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 22/206 (10%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--RELQTMRLLDHPNVVSL 123
+ +G GSFG V K E+G A+K KV++ K+ ++ E + ++ ++ P +V L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 124 KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
+ F KD L +V+EYV + H + R + + Y QI Y+H
Sbjct: 107 EFSF-----KDNSNLYMVMEYV---AGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGA 242
++ + +RD+KP+NLL++ + +++ DFG AK VKG +C Y APE+I +
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIIL-S 212
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLF 268
Y A+D W+ G ++ E+ G P F
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 130/285 (45%), Gaps = 50/285 (17%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLK 124
+ +G G+ G V A T EAVA+K ++ KR + +E+ ++L+H NVV
Sbjct: 12 QTLGEGAAGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVK-- 68
Query: 125 HCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F+ + + L LEY E R+ + MP + +F+Q+ + Y+
Sbjct: 69 --FYGHRREGNIQY-LFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLV--KGEPNISYICSRY-YRAPELI 239
H IG+ HRDIKP+NLL++ + LK+ DFG A V E ++ +C Y APEL+
Sbjct: 121 HG-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 240 FGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY 299
+ +D+WS G VL +L G+ P + D E Y
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------Y 217
Query: 300 TEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFD 344
+++K + +PW KI + L+ ++L +P+ R T D
Sbjct: 218 SDWKEKKTYLNPWKKIDSAPLA-----LLHKILVENPSARITIPD 257
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 22/206 (10%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--RELQTMRLLDHPNVVSL 123
+ +G GSFG V K E+G A+K KV++ K+ ++ E + ++ ++ P +V L
Sbjct: 42 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 101
Query: 124 KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
+ F KD L +V+EYV + H + R + + Y QI Y+H
Sbjct: 102 EFSF-----KDNSNLYMVMEYV---AGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 153
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGA 242
++ + +RD+KP+NLL++ + +++ DFG AK VKG +C Y APE+I +
Sbjct: 154 -SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIIL-S 207
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLF 268
Y A+D W+ G ++ E+ G P F
Sbjct: 208 KGYNKAVDWWALGVLIYEMAAGYPPF 233
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 112/219 (51%), Gaps = 20/219 (9%)
Query: 72 VVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMR-------LLDHPNVVSLK 124
++G GSF V++A+ + TG VAIK + + YK +Q ++ L HP+++ L
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 125 HCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
+ F +D Y+ LVLE ++R +K+ K + + +QI + Y+H
Sbjct: 78 NYF-----EDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENE---ARHFMHQIITGMLYLH 129
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL-VKGEPNISYICSRYYRAPELIFGA 242
+ G+ HRD+ NLL+ + +K+ DFG A L + E + + + Y +PE I
Sbjct: 130 SH-GILHRDLTLSNLLLTRNM-NIKIADFGLATQLKMPHEKHYTLCGTPNYISPE-IATR 186
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 281
+ + D+WS GC+ LL+G+P F ++ + L +++
Sbjct: 187 SAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV 225
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 22/206 (10%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--RELQTMRLLDHPNVVSL 123
+ +G GSFG V K E+G A+K KV++ K+ ++ E + ++ ++ P +V L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 124 KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
+ F KD L +V+EYV + H + R + + Y QI Y+H
Sbjct: 107 EFSF-----KDNSNLYMVMEYV---AGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGA 242
++ + +RD+KP+NLL++ + +++ DFG AK VKG +C Y APE+I +
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIIL-S 212
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLF 268
Y A+D W+ G ++ E+ G P F
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 120/269 (44%), Gaps = 29/269 (10%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTE 132
+G G++GVV + + + +G+ A+K++ + N + Q L D C F+ T
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRI---RATVNSQEQKRLLXDLDISXRTVDCPFTVTF 98
Query: 133 KDELY----LNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGV 188
L+ + + E ++ + K Q +P + I +AL ++H+ + V
Sbjct: 99 YGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 158
Query: 189 CHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKG-EPNISYICSRYYRAPELI---FGATE 244
HRD+KP N+L+N Q+K CDFG + LV +I C + Y APE I
Sbjct: 159 IHRDVKPSNVLIN-ALGQVKXCDFGISGYLVDDVAKDIDAGC-KPYXAPERINPELNQKG 216
Query: 245 YTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTRE-------------E 291
Y+ DIWS G EL + + FP +S ++ +V+ P+ +
Sbjct: 217 YSVKSDIWSLGITXIELAILR--FPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFT 274
Query: 292 IKCMNPNYTEF-KFPQIKAHPWHKIFQKR 319
+C+ N E +P++ HP+ + + +
Sbjct: 275 SQCLKKNSKERPTYPELXQHPFFTLHESK 303
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLDHPNVV--SLKHCF- 127
+V+G GSFG V A+ + E KVLQ K ++ + ++ NV+ ++KH F
Sbjct: 44 KVIGKGSFGKVLLARH-KAEEVFYAVKVLQKKAILKKK-EEKHIMSERNVLLKNVKHPFL 101
Query: 128 ----FSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAY 181
FS D+LY VL+Y+ E + + + + R + Y +I AL Y
Sbjct: 102 VGLHFSFQTADKLYF--VLDYINGGELFYHLQRERCFLEPR-----ARFYAAEIASALGY 154
Query: 182 IHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC-SRYYRAPELIF 240
+H ++ + +RD+KP+N+L++ H + L DFG K ++ S C + Y APE +
Sbjct: 155 LH-SLNIVYRDLKPENILLDSQGH-IVLTDFGLCKENIEHNSTTSTFCGTPEYLAPE-VL 211
Query: 241 GATEYTAAIDIWSAGCVLAELLLGQPLF 268
Y +D W G VL E+L G P F
Sbjct: 212 HKQPYDRTVDWWCLGAVLYEMLYGLPPF 239
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 130/287 (45%), Gaps = 54/287 (18%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLK 124
+ +G G++G V A T EAVA+K ++ KR + +E+ ++L+H NVV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVK-- 68
Query: 125 HCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F+ + + L LEY E R+ + MP + +F+Q+ + Y+
Sbjct: 69 --FYGHRREGNIQY-LFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY-----YRAPE 237
H IG+ HRDIKP+NLL++ + LK+ DFG A V N + ++ Y APE
Sbjct: 121 HG-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYN--NRERLLNKMXGTLPYVAPE 176
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 297
L+ + +D+WS G VL +L G+ P + D E
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSXQE------------------ 216
Query: 298 NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFD 344
Y+++K + +PW KI + L+ ++L +P+ R T D
Sbjct: 217 -YSDWKEKKTYLNPWKKIDSAPLA-----LLHKILVENPSARITIPD 257
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 127/284 (44%), Gaps = 43/284 (15%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTM-RLLDHPNVVSLKH 125
Y+ + +G GS+ + T A+K + + KR + E++ + R HPN+++LK
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKD 88
Query: 126 CFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNT 185
+ + +YL L E + ++++ + S+R + I + + Y+H+
Sbjct: 89 VY---DDGKHVYLVTELMRGGELLDKILRQKF-FSERE----ASFVLHTIGKTVEYLHSQ 140
Query: 186 IGVCHRDIKPQNLLV-----NPHTHQLKLCDFGSAKVLVKGEPNISYIC-SRYYRAPELI 239
GV HRD+KP N+L NP L++CDFG AK L + C + + APE +
Sbjct: 141 -GVVHRDLKPSNILYVDESGNPEC--LRICDFGFAKQLRAENGLLMTPCYTANFVAPE-V 196
Query: 240 FGATEYTAAIDIWSAGCVLAELLLG-QPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPN 298
Y DIWS G +L +L G P G S D EI+ +G+
Sbjct: 197 LKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPS--DTPEEILTRIGSG----------- 243
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTA 342
KF + W+ + + A DLVS++L P+ R TA
Sbjct: 244 ----KF-TLSGGNWNTVSET-----AKDLVSKMLHVDPHQRLTA 277
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 106/206 (51%), Gaps = 22/206 (10%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--RELQTMRLLDHPNVVSL 123
+ +G GSFG V K E+G A+K KV++ K+ ++ E + ++ ++ P +V L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 124 KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
+ F KD L +V+EYV + H + R + + Y QI Y+H
Sbjct: 107 EFSF-----KDNSNLYMVMEYV---AGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGA 242
++ + +RD+KP+NL+++ + +++ DFG AK VKG +C Y APE+I +
Sbjct: 159 -SLDLIYRDLKPENLIIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIII-S 212
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLF 268
Y A+D W+ G ++ E+ G P F
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 131/294 (44%), Gaps = 48/294 (16%)
Query: 64 TISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKV------LQDKRYKNRELQTMRLLDH 117
T Y +G G+F VV + + TG+ A K + +D + RE + RLL H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 118 PNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVI-KHHYKMSQRMPLIYVKLYFYQIC 176
PN+V L S +E+ YL L E ++ + +Y + I QI
Sbjct: 63 PNIVRLHD---SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQ------QIL 113
Query: 177 RALAYIHNTIGVCHRDIKPQNLLVNPHTH--QLKLCDFGSAKVLVKGEPN--ISYICSRY 232
++ + H G+ HRD+KP+NLL+ + +KL DFG A + V+G+ + +
Sbjct: 114 ESVNHCHLN-GIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPG 171
Query: 233 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 292
Y +PE + Y +D+W+ G +L LL+G P F E +L + IK
Sbjct: 172 YLSPE-VLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQ-HRLYQQIKA--------- 220
Query: 293 KCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
+ FP + W + PEA DL++++L +P R TA +A+
Sbjct: 221 -------GAYDFPSPE---WDTV-----TPEAKDLINKMLTINPAKRITASEAL 259
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 106/206 (51%), Gaps = 22/206 (10%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--RELQTMRLLDHPNVVSL 123
+ +G GSFG V K E+G A+K KV++ K+ ++ E + ++ ++ P +V L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 124 KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
+ F KD L +V+EYV + H + R + + Y QI Y+H
Sbjct: 107 EFSF-----KDNSNLYMVMEYV---AGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGA 242
++ + +RD+KP+NLL++ + +++ DFG AK VKG +C Y APE+I +
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIIL-S 212
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLF 268
Y A+D W+ G ++ ++ G P F
Sbjct: 213 KGYNKAVDWWALGVLIYQMAAGYPPF 238
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 130/287 (45%), Gaps = 54/287 (18%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLK 124
+ +G G++G V A T EAVA+K ++ KR + +E+ ++L+H NVV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVK-- 68
Query: 125 HCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F+ + + L LEY E R+ + MP + +F+Q+ + Y+
Sbjct: 69 --FYGHRREGNIQY-LFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY-----YRAPE 237
H IG+ HRDIKP+NLL++ + LK+ DFG A V N + ++ Y APE
Sbjct: 121 HG-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYN--NRERLLNKMXGTLPYVAPE 176
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 297
L+ + +D+WS G VL +L G+ P + D E
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE------------------ 216
Query: 298 NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFD 344
Y+++K + +PW KI + L+ ++L +P+ R T D
Sbjct: 217 -YSDWKEKKTYLNPWKKIDSAPLA-----LLHKILVENPSARITIPD 257
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 127/284 (44%), Gaps = 43/284 (15%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTM-RLLDHPNVVSLKH 125
Y+ + +G GS+ + T A+K + + KR + E++ + R HPN+++LK
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKD 88
Query: 126 CFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNT 185
+ + +YL L E + ++++ + S+R + I + + Y+H+
Sbjct: 89 VY---DDGKHVYLVTELMRGGELLDKILRQKF-FSERE----ASFVLHTIGKTVEYLHSQ 140
Query: 186 IGVCHRDIKPQNLLV-----NPHTHQLKLCDFGSAKVLVKGEPNISYIC-SRYYRAPELI 239
GV HRD+KP N+L NP L++CDFG AK L + C + + APE +
Sbjct: 141 -GVVHRDLKPSNILYVDESGNPEC--LRICDFGFAKQLRAENGLLMTPCYTANFVAPE-V 196
Query: 240 FGATEYTAAIDIWSAGCVLAELLLG-QPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPN 298
Y DIWS G +L +L G P G S D EI+ +G+
Sbjct: 197 LKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPS--DTPEEILTRIGSG----------- 243
Query: 299 YTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTA 342
KF + W+ + + A DLVS++L P+ R TA
Sbjct: 244 ----KF-TLSGGNWNTVSET-----AKDLVSKMLHVDPHQRLTA 277
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 130/287 (45%), Gaps = 54/287 (18%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLK 124
+ +G G++G V A T EAVA+K ++ KR + +E+ ++L+H NVV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVK-- 68
Query: 125 HCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F+ + + L LEY E R+ + MP + +F+Q+ + Y+
Sbjct: 69 --FYGHRREGNIQY-LFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY-----YRAPE 237
H IG+ HRDIKP+NLL++ + LK+ DFG A V N + ++ Y APE
Sbjct: 121 HG-IGITHRDIKPENLLLDERDN-LKISDFGLATVFRYN--NRERLLNKMXGTLPYVAPE 176
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 297
L+ + +D+WS G VL +L G+ P + D E
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE------------------ 216
Query: 298 NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFD 344
Y+++K + +PW KI + L+ ++L +P+ R T D
Sbjct: 217 -YSDWKEKKTYLNPWKKIDSAPLA-----LLHKILVENPSARITIPD 257
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 145/334 (43%), Gaps = 68/334 (20%)
Query: 24 NDMKIRDDKEME---ATVVDGNGTEAGHIIVTTIGGKNGQPKQTISYMAE----RVVGHG 76
+ +K ++++EM+ + D +G E + + +PK ++ M E +++G G
Sbjct: 111 DGLKKQEEEEMDFRSGSPSDNSGAEEMEVSL-------AKPKHRVT-MNEFEYLKLLGKG 162
Query: 77 SFGVVFQAKCLETG----------EAVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHC 126
+FG V K TG E + K + +NR LQ R HP + +LK+
Sbjct: 163 TFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR---HPFLTALKYS 219
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTI 186
F T ++ L V+EY + H + + Y +I AL Y+H+
Sbjct: 220 F-QTHDR----LCFVMEYANGGE---LFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 271
Query: 187 GVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEY 245
V +RD+K +NL+++ H +K+ DFG K +K + C Y APE + +Y
Sbjct: 272 NVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKTFCGTPEYLAPE-VLEDNDY 329
Query: 246 TAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFP 305
A+D W G V+ E++ G+ F + ++L E+I + EEI+
Sbjct: 330 GRAVDWWGLGVVMYEMMCGRLPFYNQDH-EKLFELILM------EEIR------------ 370
Query: 306 QIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
F + + PEA L+S LL+ P R
Sbjct: 371 ----------FPRTLGPEAKSLLSGLLKKDPKQR 394
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 122/282 (43%), Gaps = 57/282 (20%)
Query: 71 RVVGHGSFGVVFQAKCLETG----------EAVAIKKVLQDKRYKNRELQTMRLLDHPNV 120
+++G G+FG V K TG E + K + +NR LQ R HP +
Sbjct: 15 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR---HPFL 71
Query: 121 VSLKHCFFSTTEKDELYLNLVLEYV--PETVHRVIKHHYKMSQRMPLIYVKLYFYQICRA 178
+LK+ F T ++ L V+EY E + + R + Y +I A
Sbjct: 72 TALKYSF-QTHDR----LCFVMEYANGGELFFHLSRERVFSEDR-----ARFYGAEIVSA 121
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-YYRAPE 237
L Y+H+ V +RD+K +NL+++ H +K+ DFG K +K + C Y APE
Sbjct: 122 LDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKXFCGTPEYLAPE 180
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 297
+ +Y A+D W G V+ E++ G+ F + ++L E+I + EEI+
Sbjct: 181 -VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-EKLFELILM------EEIR---- 228
Query: 298 NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
F + + PEA L+S LL+ P R
Sbjct: 229 ------------------FPRTLGPEAKSLLSGLLKKDPKQR 252
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 122/282 (43%), Gaps = 57/282 (20%)
Query: 71 RVVGHGSFGVVFQAKCLETG----------EAVAIKKVLQDKRYKNRELQTMRLLDHPNV 120
+++G G+FG V K TG E + K + +NR LQ R HP +
Sbjct: 14 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR---HPFL 70
Query: 121 VSLKHCFFSTTEKDELYLNLVLEYV--PETVHRVIKHHYKMSQRMPLIYVKLYFYQICRA 178
+LK+ F T ++ L V+EY E + + R + Y +I A
Sbjct: 71 TALKYSF-QTHDR----LCFVMEYANGGELFFHLSRERVFSEDR-----ARFYGAEIVSA 120
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-YYRAPE 237
L Y+H+ V +RD+K +NL+++ H +K+ DFG K +K + C Y APE
Sbjct: 121 LDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKXFCGTPEYLAPE 179
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 297
+ +Y A+D W G V+ E++ G+ F + ++L E+I + EEI+
Sbjct: 180 -VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-EKLFELILM------EEIR---- 227
Query: 298 NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
F + + PEA L+S LL+ P R
Sbjct: 228 ------------------FPRTLGPEAKSLLSGLLKKDPKQR 251
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 122/282 (43%), Gaps = 57/282 (20%)
Query: 71 RVVGHGSFGVVFQAKCLETG----------EAVAIKKVLQDKRYKNRELQTMRLLDHPNV 120
+++G G+FG V K TG E + K + +NR LQ R HP +
Sbjct: 16 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR---HPFL 72
Query: 121 VSLKHCFFSTTEKDELYLNLVLEYV--PETVHRVIKHHYKMSQRMPLIYVKLYFYQICRA 178
+LK+ F T ++ L V+EY E + + R + Y +I A
Sbjct: 73 TALKYSF-QTHDR----LCFVMEYANGGELFFHLSRERVFSEDR-----ARFYGAEIVSA 122
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-YYRAPE 237
L Y+H+ V +RD+K +NL+++ H +K+ DFG K +K + C Y APE
Sbjct: 123 LDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKXFCGTPEYLAPE 181
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 297
+ +Y A+D W G V+ E++ G+ F + ++L E+I + EEI+
Sbjct: 182 -VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-EKLFELILM------EEIR---- 229
Query: 298 NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
F + + PEA L+S LL+ P R
Sbjct: 230 ------------------FPRTLGPEAKSLLSGLLKKDPKQR 253
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 131/294 (44%), Gaps = 48/294 (16%)
Query: 64 TISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKV------LQDKRYKNRELQTMRLLDH 117
T Y +G G+F VV + + TG+ A K + +D + RE + RLL H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 118 PNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVI-KHHYKMSQRMPLIYVKLYFYQIC 176
PN+V L S +E+ YL L E ++ + +Y + I QI
Sbjct: 63 PNIVRLHD---SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQ------QIL 113
Query: 177 RALAYIHNTIGVCHRDIKPQNLLVNPHTH--QLKLCDFGSAKVLVKGEPN--ISYICSRY 232
++ + H G+ HRD+KP+NLL+ + +KL DFG A + V+G+ + +
Sbjct: 114 ESVNHCHLN-GIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPG 171
Query: 233 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 292
Y +PE + Y +D+W+ G +L LL+G P F E +L + IK
Sbjct: 172 YLSPE-VLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQ-HRLYQQIKA--------- 220
Query: 293 KCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
+ FP + W + PEA DL++++L +P R TA +A+
Sbjct: 221 -------GAYDFPSPE---WDTV-----TPEAKDLINKMLTINPAKRITASEAL 259
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 110/223 (49%), Gaps = 32/223 (14%)
Query: 70 ERVVGHGSFGVVFQAKCLETGEAVAIKKVLQD------KRYKN--RELQTMRLLDHPNVV 121
E ++G G FG V++A G+ VA+K D + +N +E + +L HPN++
Sbjct: 12 EEIIGIGGFGKVYRA--FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNII 69
Query: 122 SLKHCFFSTTEKDELYLNLVLEYV-PETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
+L+ E L LV+E+ ++RV+ +R+P + + QI R +
Sbjct: 70 ALRGVCLK-----EPNLCLVMEFARGGPLNRVLS-----GKRIPPDILVNWAVQIARGMN 119
Query: 181 YIHN--TIGVCHRDIKPQNLLV-------NPHTHQLKLCDFGSAKVLVKGEPNISYICSR 231
Y+H+ + + HRD+K N+L+ + LK+ DFG A+ + +S +
Sbjct: 120 YLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHR-TTKMSAAGAY 178
Query: 232 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGV 274
+ APE+I A+ ++ D+WS G +L ELL G+ F G G+
Sbjct: 179 AWMAPEVI-RASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL 220
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 121/280 (43%), Gaps = 53/280 (18%)
Query: 71 RVVGHGSFGVVFQAKCLETG----------EAVAIKKVLQDKRYKNRELQTMRLLDHPNV 120
+++G G+FG V K TG E + K + +NR LQ R HP +
Sbjct: 154 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR---HPFL 210
Query: 121 VSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
+LK+ F T ++ L V+EY + H + + Y +I AL
Sbjct: 211 TALKYSF-QTHDR----LCFVMEYANGGE---LFFHLSRERVFSEDRARFYGAEIVSALD 262
Query: 181 YIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-YYRAPELI 239
Y+H+ V +RD+K +NL+++ H +K+ DFG K +K + C Y APE +
Sbjct: 263 YLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKTFCGTPEYLAPE-V 320
Query: 240 FGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY 299
+Y A+D W G V+ E++ G+ F + ++L E+I + EEI+
Sbjct: 321 LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-EKLFELILM------EEIR------ 367
Query: 300 TEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
F + + PEA L+S LL+ P R
Sbjct: 368 ----------------FPRTLGPEAKSLLSGLLKKDPKQR 391
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 95/217 (43%), Gaps = 22/217 (10%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKVL----QDKRYKNRELQTMRLLDHPNVVS 122
Y+ + +G G F V + L G A+K++L QD+ RE RL +HPN++
Sbjct: 31 YLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILR 90
Query: 123 L-KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAY 181
L +C K E +L L + T+ I+ + + ICR L
Sbjct: 91 LVAYCLRERGAKHEAWLLLPF-FKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEA 149
Query: 182 IHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGS---AKVLVKGEPNISYI-------CSR 231
IH G HRD+KP N+L+ Q L D GS A + V+G + C+
Sbjct: 150 IHAK-GYAHRDLKPTNILLGDEG-QPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTI 207
Query: 232 YYRAPELIFGATEYTA---AIDIWSAGCVLAELLLGQ 265
YRAPEL F + D+WS GCVL ++ G+
Sbjct: 208 SYRAPEL-FSVQSHCVIDERTDVWSLGCVLYAMMFGE 243
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 105/206 (50%), Gaps = 22/206 (10%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--RELQTMRLLDHPNVVSL 123
+ +G GSFG V K E+G A+K KV++ K+ ++ E + ++ ++ P +V L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 124 KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
+ F KD L +V+EYV + H + R + + Y QI Y+H
Sbjct: 107 EFSF-----KDNSNLYMVMEYV---AGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGA 242
++ + +RD+KP+NLL++ + +++ DFG AK VKG +C Y AP +I +
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPAIIL-S 212
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLF 268
Y A+D W+ G ++ E+ G P F
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 125/288 (43%), Gaps = 45/288 (15%)
Query: 64 TISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTM-RLLDHPNVVS 122
T Y + +G GS+ V + T A+K + + KR E++ + R HPN+++
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEILLRYGQHPNIIT 80
Query: 123 LKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
LK + D Y+ +V E E + ++++ + S+R + I + +
Sbjct: 81 LKDVY-----DDGKYVYVVTELXKGGELLDKILRQKF-FSERE----ASAVLFTITKTVE 130
Query: 181 YIHNTIGVCHRDIKPQNLLV-----NPHTHQLKLCDFGSAKVLVKGEPNISYIC-SRYYR 234
Y+H GV HRD+KP N+L NP + +++CDFG AK L + C + +
Sbjct: 131 YLHAQ-GVVHRDLKPSNILYVDESGNPES--IRICDFGFAKQLRAENGLLXTPCYTANFV 187
Query: 235 APELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 294
APE + Y AA DIWS G +L L G F D EI+ +G+
Sbjct: 188 APE-VLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPD-DTPEEILARIGSG------- 238
Query: 295 MNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTA 342
KF + W+ + A DLVS+ L P+ R TA
Sbjct: 239 --------KF-SLSGGYWNSV-----SDTAKDLVSKXLHVDPHQRLTA 272
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 141/308 (45%), Gaps = 68/308 (22%)
Query: 68 MAERVVGHGSFG-VVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLL----DHPNVVS 122
++E+++G+GS G VVFQ G VA+K++L D + + L ++LL DHPNV+
Sbjct: 18 VSEKILGYGSSGTVVFQGSF--QGRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVIR 73
Query: 123 LKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY-----FYQICR 177
+ +E + +L + LE + +++ + + L K Y QI
Sbjct: 74 -----YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKL--QKEYNPISLLRQIAS 126
Query: 178 ALAYIHNTIGVCHRDIKPQNLLVNPHTH------------QLKLCDFGSAKVLVKGEPNI 225
+A++H ++ + HRD+KPQN+LV+ + ++ + DFG K L G+ +
Sbjct: 127 GVAHLH-SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSF 185
Query: 226 SYIC-----SRYYRAPELIFGAT------EYTAAIDIWSAGCVLAELLLGQPLFPGESGV 274
+ +RAPEL+ + T +IDI+S GCV +L + P
Sbjct: 186 RTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFY-YILSKGKHPFGDKY 244
Query: 275 DQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQY 334
+ II+ G + +E+KC++ + + EA DL+S+++ +
Sbjct: 245 SRESNIIR--GIFSLDEMKCLH--------------------DRSLIAEATDLISQMIDH 282
Query: 335 SPNLRSTA 342
P R TA
Sbjct: 283 DPLKRPTA 290
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 129/285 (45%), Gaps = 48/285 (16%)
Query: 73 VGHGSFGVVFQA-KCLETGEAVAI-----KKVLQDKRYKNRELQTMRLLDHPNVVSLKHC 126
+G G+F VV + K L E A+ K +D + RE + RLL HPN+V L
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD- 77
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVI-KHHYKMSQRMPLIYVKLYFYQICRALAYIHNT 185
S +E+ YL L E ++ + +Y + I QI A+ + H
Sbjct: 78 --SISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQ------QILEAVLHCHQ- 128
Query: 186 IGVCHRDIKPQNLLVNPHTH--QLKLCDFGSAKVLVKGEPN--ISYICSRYYRAPELIFG 241
+GV HR++KP+NLL+ +KL DFG A + V+GE + + Y +PE +
Sbjct: 129 MGVVHRNLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSPE-VLR 186
Query: 242 ATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTE 301
Y +D+W+ G +L LL+G P F E +L + IK
Sbjct: 187 KDPYGKPVDLWACGVILYILLVGYPPFWDEDQ-HRLYQQIKA----------------GA 229
Query: 302 FKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
+ FP + W + PEA DL++++L +P+ R TA +A+
Sbjct: 230 YDFPSPE---WDTV-----TPEAKDLINKMLTINPSKRITAAEAL 266
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 20/204 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVVSLKHCF 127
+G G+FG V++AK ETG A+A KV++ K + E++ + DHP +V L +
Sbjct: 19 LGDGAFGKVYKAKNKETG-ALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 128 FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIG 187
+ + L +++E+ P I P I V Q+ AL ++H+
Sbjct: 78 YHDGK-----LWIMIEFCPGGAVDAIMLELDRGLTEPQIQV--VCRQMLEALNFLHSK-R 129
Query: 188 VCHRDIKPQNLLVNPHTHQLKLCDFG-SAKVLVKGEPNISYICSRYYRAPELI----FGA 242
+ HRD+K N+L+ ++L DFG SAK L + S+I + Y+ APE++
Sbjct: 130 IIHRDLKAGNVLMTLEG-DIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 188
Query: 243 TEYTAAIDIWSAGCVLAELLLGQP 266
T Y DIWS G L E+ +P
Sbjct: 189 TPYDYKADIWSLGITLIEMAQIEP 212
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 20/204 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVVSLKHCF 127
+G G+FG V++AK ETG A+A KV++ K + E++ + DHP +V L +
Sbjct: 27 LGDGAFGKVYKAKNKETG-ALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 128 FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIG 187
+ + L +++E+ P I P I V Q+ AL ++H+
Sbjct: 86 YHDGK-----LWIMIEFCPGGAVDAIMLELDRGLTEPQIQV--VCRQMLEALNFLHSK-R 137
Query: 188 VCHRDIKPQNLLVNPHTHQLKLCDFG-SAKVLVKGEPNISYICSRYYRAPELI----FGA 242
+ HRD+K N+L+ ++L DFG SAK L + S+I + Y+ APE++
Sbjct: 138 IIHRDLKAGNVLMTLEG-DIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 196
Query: 243 TEYTAAIDIWSAGCVLAELLLGQP 266
T Y DIWS G L E+ +P
Sbjct: 197 TPYDYKADIWSLGITLIEMAQIEP 220
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 100/203 (49%), Gaps = 17/203 (8%)
Query: 72 VVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFS-- 129
++G G FG VF+AK G+ IK+V + RE++ + LDH N+V C+
Sbjct: 18 LIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFD 77
Query: 130 ----TTEKDELY-----LNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRAL 179
T+ K+ L + +E+ + T+ + I+ + +++ + F QI + +
Sbjct: 78 YDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK--RRGEKLDKVLALELFEQITKGV 135
Query: 180 AYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 239
YIH+ + +RD+KP N+ + T Q+K+ DFG L + Y +PE I
Sbjct: 136 DYIHSK-KLINRDLKPSNIFL-VDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQI 193
Query: 240 FGATEYTAAIDIWSAGCVLAELL 262
+ +Y +D+++ G +LAELL
Sbjct: 194 -SSQDYGKEVDLYALGLILAELL 215
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 105/206 (50%), Gaps = 22/206 (10%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKN--RELQTMRLLDHPNVVSL 123
+ +G GSFG V K E+G A+K KV++ K+ ++ E + ++ ++ P +V L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 124 KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
+ F KD L +V+EYV + H + R + + Y QI Y+H
Sbjct: 107 EFSF-----KDNSNLYMVMEYV---AGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGA 242
++ + +RD+KP+NLL++ + +++ DFG AK VKG +C APE+I +
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEALAPEIIL-S 212
Query: 243 TEYTAAIDIWSAGCVLAELLLGQPLF 268
Y A+D W+ G ++ E+ G P F
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 140/308 (45%), Gaps = 68/308 (22%)
Query: 68 MAERVVGHGSFG-VVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLL----DHPNVVS 122
++E+++G+GS G VVFQ G VA+K++L D + + L ++LL DHPNV+
Sbjct: 18 VSEKILGYGSSGTVVFQGSF--QGRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVIR 73
Query: 123 LKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLY-----FYQICR 177
+ +E + +L + LE + +++ + + L K Y QI
Sbjct: 74 -----YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKL--QKEYNPISLLRQIAS 126
Query: 178 ALAYIHNTIGVCHRDIKPQNLLVNPHTH------------QLKLCDFGSAKVLVKGEPNI 225
+A++H ++ + HRD+KPQN+LV+ + ++ + DFG K L G+
Sbjct: 127 GVAHLH-SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 185
Query: 226 SYIC-----SRYYRAPELIFGAT------EYTAAIDIWSAGCVLAELLLGQPLFPGESGV 274
+ +RAPEL+ + T +IDI+S GCV +L + P
Sbjct: 186 RXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFY-YILSKGKHPFGDKY 244
Query: 275 DQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQY 334
+ II+ G + +E+KC++ + + EA DL+S+++ +
Sbjct: 245 SRESNIIR--GIFSLDEMKCLH--------------------DRSLIAEATDLISQMIDH 282
Query: 335 SPNLRSTA 342
P R TA
Sbjct: 283 DPLKRPTA 290
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 129/279 (46%), Gaps = 35/279 (12%)
Query: 67 YMAERVVGHGSFGVVFQAKCLET--GEAVAIKKVLQDKRYKN------RELQTMRLLDHP 118
Y+ ++G GS+G V + ET AV I K + +R N +E+Q +R L H
Sbjct: 7 YLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHK 66
Query: 119 NVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRA 178
NV+ L ++ EK ++Y+ V+EY + ++ +R P+ YF Q+
Sbjct: 67 NVIQLVDVLYNE-EKQKMYM--VMEYCVCGMQEMLDS--VPEKRFPVCQAHGYFCQLIDG 121
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL---VKGEPNISYICSRYYRA 235
L Y+H+ G+ H+DIKP NLL+ LK+ G A+ L + + S ++
Sbjct: 122 LEYLHSQ-GIVHKDIKPGNLLLT-TGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQP 179
Query: 236 PELIFGATEYTA-AIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKV--------LGT 286
PE+ G ++ +DIWSAG L + G F G++ + +L E I G
Sbjct: 180 PEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN-IYKLFENIGKGSYAIPGDCGP 238
Query: 287 PTREEIKCM---NPNYTEFKFPQIKAHPWHKIFQKRMPP 322
P + +K M P F QI+ H W F+K+ PP
Sbjct: 239 PLSDLLKGMLEYEPA-KRFSIRQIRQHSW---FRKKHPP 273
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 121/253 (47%), Gaps = 28/253 (11%)
Query: 59 GQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKV-LQDKRYKN---RELQTMRL 114
G PK+ Y +G G+ G V+ A + TG+ VAI+++ LQ + K E+ MR
Sbjct: 16 GDPKK--KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 73
Query: 115 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQ 174
+PN+V+ + DEL++ V+EY+ + M +
Sbjct: 74 NKNPNIVNYLDSYLVG---DELWV--VMEYLAGGSLTDVVTETCMDEGQ--------IAA 120
Query: 175 ICR----ALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFG-SAKVLVKGEPNISYIC 229
+CR AL ++H+ V HRDIK N+L+ +KL DFG A++ + + +
Sbjct: 121 VCRECLQALEFLHSN-QVIHRDIKSDNILLG-MDGSVKLTDFGFCAQITPEQSKRSTMVG 178
Query: 230 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 289
+ Y+ APE++ Y +DIWS G + E++ G+P + E+ + L +I GTP
Sbjct: 179 TPYWMAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPEL 236
Query: 290 EEIKCMNPNYTEF 302
+ + ++ + +F
Sbjct: 237 QNPEKLSAIFRDF 249
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 129/294 (43%), Gaps = 48/294 (16%)
Query: 64 TISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKV------LQDKRYKNRELQTMRLLDH 117
T Y +G G+F VV + L TG A K + +D + RE + RLL H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 118 PNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVI-KHHYKMSQRMPLIYVKLYFYQIC 176
N+V L S +E+ YL L E ++ + +Y + I QI
Sbjct: 63 SNIVRLHD---SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQ------QIL 113
Query: 177 RALAYIHNTIGVCHRDIKPQNLLVNPHTH--QLKLCDFGSAKVLVKGEPN--ISYICSRY 232
A+ + H +GV HRD+KP+NLL+ +KL DFG A + V+G+ + +
Sbjct: 114 EAVLHCHQ-MGVVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPG 171
Query: 233 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 292
Y +PE + Y +DIW+ G +L LL+G P F E +L + IK
Sbjct: 172 YLSPE-VLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQ-HKLYQQIKA--------- 220
Query: 293 KCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
+ FP + W + PEA +L++++L +P R TA +A+
Sbjct: 221 -------GAYDFPSPE---WDTV-----TPEAKNLINQMLTINPAKRITAHEAL 259
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 120/253 (47%), Gaps = 28/253 (11%)
Query: 59 GQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKV-LQDKRYKN---RELQTMRL 114
G PK+ Y +G G+ G V+ A + TG+ VAI+++ LQ + K E+ MR
Sbjct: 16 GDPKK--KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 73
Query: 115 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQ 174
+PN+V+ + DEL++ V+EY+ + M +
Sbjct: 74 NKNPNIVNYLDSYLVG---DELWV--VMEYLAGGSLTDVVTETCMDEGQ--------IAA 120
Query: 175 ICR----ALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFG-SAKVLVKGEPNISYIC 229
+CR AL ++H+ V HRDIK N+L+ +KL DFG A++ + +
Sbjct: 121 VCRECLQALEFLHSN-QVIHRDIKSDNILLG-MDGSVKLTDFGFCAQITPEQSKRSEMVG 178
Query: 230 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 289
+ Y+ APE++ Y +DIWS G + E++ G+P + E+ + L +I GTP
Sbjct: 179 TPYWMAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPEL 236
Query: 290 EEIKCMNPNYTEF 302
+ + ++ + +F
Sbjct: 237 QNPEKLSAIFRDF 249
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 120/253 (47%), Gaps = 28/253 (11%)
Query: 59 GQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKV-LQDKRYKN---RELQTMRL 114
G PK+ Y +G G+ G V+ A + TG+ VAI+++ LQ + K E+ MR
Sbjct: 16 GDPKK--KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 73
Query: 115 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQ 174
+PN+V+ + DEL++ V+EY+ + M +
Sbjct: 74 NKNPNIVNYLDSYLVG---DELWV--VMEYLAGGSLTDVVTETCMDEGQ--------IAA 120
Query: 175 ICR----ALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFG-SAKVLVKGEPNISYIC 229
+CR AL ++H+ V HRDIK N+L+ +KL DFG A++ + +
Sbjct: 121 VCRECLQALEFLHSN-QVIHRDIKSDNILLG-MDGSVKLTDFGFCAQITPEQSKRSXMVG 178
Query: 230 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 289
+ Y+ APE++ Y +DIWS G + E++ G+P + E+ + L +I GTP
Sbjct: 179 TPYWMAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPEL 236
Query: 290 EEIKCMNPNYTEF 302
+ + ++ + +F
Sbjct: 237 QNPEKLSAIFRDF 249
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 120/253 (47%), Gaps = 28/253 (11%)
Query: 59 GQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKV-LQDKRYKN---RELQTMRL 114
G PK+ Y +G G+ G V+ A + TG+ VAI+++ LQ + K E+ MR
Sbjct: 17 GDPKK--KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 74
Query: 115 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQ 174
+PN+V+ + DEL++ V+EY+ + M +
Sbjct: 75 NKNPNIVNYLDSYLVG---DELWV--VMEYLAGGSLTDVVTETCMDEGQ--------IAA 121
Query: 175 ICR----ALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFG-SAKVLVKGEPNISYIC 229
+CR AL ++H+ V HRDIK N+L+ +KL DFG A++ + +
Sbjct: 122 VCRECLQALEFLHSN-QVIHRDIKSDNILLG-MDGSVKLTDFGFCAQITPEQSKRSXMVG 179
Query: 230 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 289
+ Y+ APE++ Y +DIWS G + E++ G+P + E+ + L +I GTP
Sbjct: 180 TPYWMAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPEL 237
Query: 290 EEIKCMNPNYTEF 302
+ + ++ + +F
Sbjct: 238 QNPEKLSAIFRDF 250
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 32/217 (14%)
Query: 72 VVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFS-- 129
++G G FG VF+AK G+ I++V + RE++ + LDH N+V C+
Sbjct: 19 LIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFD 78
Query: 130 ---TTEKDELYLNLVLEYVPETVHRVIKHHYK---------------------MSQRMPL 165
T D L + +Y PE + K +++
Sbjct: 79 YDPETSDDSLESS---DYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDK 135
Query: 166 IYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI 225
+ F QI + + YIH+ + HRD+KP N+ + T Q+K+ DFG L
Sbjct: 136 VLALELFEQITKGVDYIHSK-KLIHRDLKPSNIFL-VDTKQVKIGDFGLVTSLKNDGKRT 193
Query: 226 SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELL 262
+ Y +PE I + +Y +D+++ G +LAELL
Sbjct: 194 RSKGTLRYMSPEQI-SSQDYGKEVDLYALGLILAELL 229
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 21/213 (9%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN-----RELQTMRLLDHPNVV 121
Y + V+G G+ VV A C E VAIK++ +K + +E+Q M HPN+V
Sbjct: 12 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIV 71
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIY----VKLYFYQICR 177
S + S KDEL+L + L +V +IKH + + + ++
Sbjct: 72 SY---YTSFVVKDELWLVMKL-LSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 127
Query: 178 ALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKG------EPNISYICSR 231
L Y+H G HRD+K N+L+ +++ DFG + L G + +++ +
Sbjct: 128 GLEYLHKN-GQIHRDVKAGNILLG-EDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 185
Query: 232 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLG 264
+ APE++ Y DIWS G EL G
Sbjct: 186 CWMAPEVMEQVRGYDFKADIWSFGITAIELATG 218
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 21/213 (9%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN-----RELQTMRLLDHPNVV 121
Y + V+G G+ VV A C E VAIK++ +K + +E+Q M HPN+V
Sbjct: 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIV 76
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIY----VKLYFYQICR 177
S + S KDEL+L + L +V +IKH + + + ++
Sbjct: 77 SY---YTSFVVKDELWLVMKL-LSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 132
Query: 178 ALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKG------EPNISYICSR 231
L Y+H G HRD+K N+L+ +++ DFG + L G + +++ +
Sbjct: 133 GLEYLHKN-GQIHRDVKAGNILLG-EDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 190
Query: 232 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLG 264
+ APE++ Y DIWS G EL G
Sbjct: 191 CWMAPEVMEQVRGYDFKADIWSFGITAIELATG 223
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 16/197 (8%)
Query: 70 ERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN--RELQTMRLLDHPNVVSLKHCF 127
E VVG G+FGVV +AK + VAIK++ + K EL+ + ++HPN+V L
Sbjct: 14 EEVVGRGAFGVVCKAKW--RAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGAC 71
Query: 128 FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNT-- 185
+ + LV+EY + H + + + Q + +AY+H+
Sbjct: 72 LNP-------VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQP 124
Query: 186 IGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 245
+ HRD+KP NLL+ LK+CDFG+A + N S + APE +F + Y
Sbjct: 125 KALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK--GSAAWMAPE-VFEGSNY 181
Query: 246 TAAIDIWSAGCVLAELL 262
+ D++S G +L E++
Sbjct: 182 SEKCDVFSWGIILWEVI 198
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 103/212 (48%), Gaps = 21/212 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNR------ELQTMRLLDHPNVVSLKHC 126
+G GS G+V A+ +G VA+K + D R + R E+ MR H NVV +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVK--MMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKS 110
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTI 186
+ E L +++E++ I ++++ + + +ALAY+H
Sbjct: 111 YLVGEE-----LWVLMEFLQGGALTDIVSQVRLNEEQ----IATVCEAVLQALAYLHAQ- 160
Query: 187 GVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC-SRYYRAPELIFGATEY 245
GV HRDIK ++L+ ++KL DFG + K P + + Y+ APE+I + Y
Sbjct: 161 GVIHRDIKSDSILLT-LDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVI-SRSLY 218
Query: 246 TAAIDIWSAGCVLAELLLGQPLFPGESGVDQL 277
+DIWS G ++ E++ G+P + +S V +
Sbjct: 219 ATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM 250
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 101/224 (45%), Gaps = 22/224 (9%)
Query: 58 NGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTM----- 112
N K + +Y + +G G+F VV + TG A K ++ K+ R+ Q +
Sbjct: 22 NASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAK-IINTKKLSARDFQKLEREAR 80
Query: 113 --RLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVI-KHHYKMSQRMPLIYVK 169
R L HPN+V L S E+ YL L E ++ + Y + I
Sbjct: 81 ICRKLQHPNIVRLHD---SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-- 135
Query: 170 LYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTH--QLKLCDFGSAKVLVKGEPNISY 227
QI ++AY H+ G+ HR++KP+NLL+ +KL DFG A + E +
Sbjct: 136 ----QILESIAYCHSN-GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF 190
Query: 228 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGE 271
+ Y +PE + Y+ +DIW+ G +L LL+G P F E
Sbjct: 191 AGTPGYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPFWDE 233
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 116/277 (41%), Gaps = 48/277 (17%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTM-------RLLDHPNVVSLKH 125
+G G F F+ +T E A K V + K + + M R L H +VV H
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF-H 87
Query: 126 CFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNT 185
FF +D ++ +VLE R + +K + + + Y QI Y+H
Sbjct: 88 GFF----EDNDFVFVVLELC---RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN 140
Query: 186 IGVCHRDIKPQNLLVNPHTHQLKLCDFGSA-KVLVKGEPNISYICSRYYRAPELIFGATE 244
V HRD+K NL +N ++K+ DFG A KV GE + + Y APE +
Sbjct: 141 -RVIHRDLKLGNLFLN-EDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPE-VLSKKG 197
Query: 245 YTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF 304
++ +D+WS GC++ LL+G+P F E C+ Y
Sbjct: 198 HSFEVDVWSIGCIMYTLLVGKPPF----------------------ETSCLKETYL---- 231
Query: 305 PQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRST 341
+IK + + K + P A L+ ++LQ P R T
Sbjct: 232 -RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPT 265
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 121/253 (47%), Gaps = 28/253 (11%)
Query: 59 GQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKV-LQDKRYKN---RELQTMRL 114
G PK+ Y +G G+ G V+ A + TG+ VAI+++ LQ + K E+ MR
Sbjct: 17 GDPKK--KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 74
Query: 115 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQ 174
+PN+V+ + DEL++ V+EY+ + M +
Sbjct: 75 NKNPNIVNYLDSYLVG---DELWV--VMEYLAGGSLTDVVTETCMDEGQ--------IAA 121
Query: 175 ICR----ALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFG-SAKVLVKGEPNISYIC 229
+CR AL ++H+ V HR+IK N+L+ +KL DFG A++ + + +
Sbjct: 122 VCRECLQALEFLHSN-QVIHRNIKSDNILLG-MDGSVKLTDFGFCAQITPEQSKRSTMVG 179
Query: 230 SRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 289
+ Y+ APE++ Y +DIWS G + E++ G+P + E+ + L +I GTP
Sbjct: 180 TPYWMAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPEL 237
Query: 290 EEIKCMNPNYTEF 302
+ + ++ + +F
Sbjct: 238 QNPEKLSAIFRDF 250
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 117/277 (42%), Gaps = 48/277 (17%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK--NRELQTM-----RLLDHPNVVSLKH 125
+G G F F+ +T E A K V + K RE +M R L H +VV H
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF-H 83
Query: 126 CFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNT 185
FF +D ++ +VLE R + +K + + + Y QI Y+H
Sbjct: 84 GFF----EDNDFVFVVLELC---RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN 136
Query: 186 IGVCHRDIKPQNLLVNPHTHQLKLCDFGSA-KVLVKGEPNISYICSRYYRAPELIFGATE 244
V HRD+K NL +N ++K+ DFG A KV GE + + Y APE +
Sbjct: 137 -RVIHRDLKLGNLFLN-EDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPE-VLSKKG 193
Query: 245 YTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF 304
++ +D+WS GC++ LL+G+P F E C+ Y
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGKPPF----------------------ETSCLKETYL---- 227
Query: 305 PQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRST 341
+IK + + K + P A L+ ++LQ P R T
Sbjct: 228 -RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPT 261
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 16/197 (8%)
Query: 70 ERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN--RELQTMRLLDHPNVVSLKHCF 127
E VVG G+FGVV +AK + VAIK++ + K EL+ + ++HPN+V L
Sbjct: 13 EEVVGRGAFGVVCKAKW--RAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGAC 70
Query: 128 FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNT-- 185
+ + LV+EY + H + + + Q + +AY+H+
Sbjct: 71 LNP-------VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQP 123
Query: 186 IGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 245
+ HRD+KP NLL+ LK+CDFG+A + N S + APE +F + Y
Sbjct: 124 KALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK--GSAAWMAPE-VFEGSNY 180
Query: 246 TAAIDIWSAGCVLAELL 262
+ D++S G +L E++
Sbjct: 181 SEKCDVFSWGIILWEVI 197
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 117/277 (42%), Gaps = 48/277 (17%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK--NRELQTM-----RLLDHPNVVSLKH 125
+G G F F+ +T E A K V + K RE +M R L H +VV H
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF-H 83
Query: 126 CFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNT 185
FF +D ++ +VLE R + +K + + + Y QI Y+H
Sbjct: 84 GFF----EDNDFVFVVLELC---RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN 136
Query: 186 IGVCHRDIKPQNLLVNPHTHQLKLCDFGSA-KVLVKGEPNISYICSRYYRAPELIFGATE 244
V HRD+K NL +N ++K+ DFG A KV GE + + Y APE +
Sbjct: 137 -RVIHRDLKLGNLFLN-EDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPE-VLSKKG 193
Query: 245 YTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF 304
++ +D+WS GC++ LL+G+P F E C+ Y
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGKPPF----------------------ETSCLKETYL---- 227
Query: 305 PQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRST 341
+IK + + K + P A L+ ++LQ P R T
Sbjct: 228 -RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPT 261
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 127/303 (41%), Gaps = 52/303 (17%)
Query: 13 TVGVDRLPEEMNDMKIRDDKEMEATVVDGNGTEAGHIIVTTIGGKNGQPKQTISYMAERV 72
+ GVD E + ++ K +V D + GH+ V IG ++ ER
Sbjct: 8 SSGVDLGTENLYFQSMQSSKRSSRSVED---DKEGHL-VCRIG----------DWLQERY 53
Query: 73 -----VGHGSFGVVFQAKCLETGEA---VAIKKVLQDKRYKNRELQTMRLLDHPNVVSLK 124
+G G+FG V +CL+ VA+K + +Y+ + +L +
Sbjct: 54 EIVGNLGEGTFGKV--VECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKE 111
Query: 125 HCFFSTTEKDEL----YLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
+ F D ++ + E + + +K + Q PL +V+ YQ+C AL
Sbjct: 112 NKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKEN--NFQPYPLPHVRHMAYQLCHALR 169
Query: 181 YIHNTIGVCHRDIKPQNLLV---------NPHTH---------QLKLCDFGSAKVLVKGE 222
++H + H D+KP+N+L N H +++ DFGSA E
Sbjct: 170 FLHEN-QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF--DHE 226
Query: 223 PNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIK 282
+ + + +R+YR PE+I + D+WS GC+L E G LF + LV + K
Sbjct: 227 HHTTIVATRHYRPPEVIL-ELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEK 285
Query: 283 VLG 285
+LG
Sbjct: 286 ILG 288
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 105/206 (50%), Gaps = 22/206 (10%)
Query: 65 ISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDK-RYKNRELQTMRLLD-HPNVVS 122
IS+ + V+GHG+ G + + + VA+K++L + + +RE+Q +R D HPNV+
Sbjct: 24 ISFCPKDVLGHGAEGTIVYRGMFDNRD-VAVKRILPECFSFADREVQLLRESDEHPNVIR 82
Query: 123 LKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
+ TEKD + + +E T+ ++ K + L + L Q LA++
Sbjct: 83 -----YFCTEKDRQFQYIAIELCAATLQEYVEQ--KDFAHLGLEPITL-LQQTTSGLAHL 134
Query: 183 HNTIGVCHRDIKPQNLLVN-PHTH---QLKLCDFGSAKVLVKGEPNISYIC----SRYYR 234
H ++ + HRD+KP N+L++ P+ H + + DFG K L G + S + +
Sbjct: 135 H-SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWI 193
Query: 235 APELIFGATEY--TAAIDIWSAGCVL 258
APE++ + T +DI+SAGCV
Sbjct: 194 APEMLSEDCKENPTYTVDIFSAGCVF 219
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 115/277 (41%), Gaps = 48/277 (17%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTM-------RLLDHPNVVSLKH 125
+G G F F+ +T E A K V + K + + M R L H +VV H
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF-H 107
Query: 126 CFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNT 185
FF +D ++ +VLE R + +K + + + Y QI Y+H
Sbjct: 108 GFF----EDNDFVFVVLELC---RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN 160
Query: 186 IGVCHRDIKPQNLLVNPHTHQLKLCDFGSA-KVLVKGEPNISYICSRYYRAPELIFGATE 244
V HRD+K NL +N ++K+ DFG A KV GE + Y APE +
Sbjct: 161 -RVIHRDLKLGNLFLN-EDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPE-VLSKKG 217
Query: 245 YTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF 304
++ +D+WS GC++ LL+G+P F E C+ Y
Sbjct: 218 HSFEVDVWSIGCIMYTLLVGKPPF----------------------ETSCLKETYL---- 251
Query: 305 PQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRST 341
+IK + + K + P A L+ ++LQ P R T
Sbjct: 252 -RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPT 285
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 103/238 (43%), Gaps = 33/238 (13%)
Query: 73 VGHGSFGVVFQAKCLETGEA---VAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFS 129
+G G+FG V +CL+ VA+K + +Y+ + +L ++ F
Sbjct: 27 LGEGTFGKV--VECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLC 84
Query: 130 TTEKDEL----YLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNT 185
D ++ + E + + +K Q PL +V+ YQ+C AL ++H
Sbjct: 85 VLMSDWFNFHGHMCIAFELLGKNTFEFLKE--NNFQPYPLPHVRHMAYQLCHALRFLHEN 142
Query: 186 IGVCHRDIKPQNLLV---------NPHTH---------QLKLCDFGSAKVLVKGEPNISY 227
+ H D+KP+N+L N H +++ DFGSA E + +
Sbjct: 143 -QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF--DHEHHTTI 199
Query: 228 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLG 285
+ +R+YR PE+I + D+WS GC+L E G LF + LV + K+LG
Sbjct: 200 VATRHYRPPEVILELG-WAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILG 256
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 103/238 (43%), Gaps = 33/238 (13%)
Query: 73 VGHGSFGVVFQAKCLETGEA---VAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFS 129
+G G+FG V +CL+ VA+K + +Y+ + +L ++ F
Sbjct: 36 LGEGTFGKV--VECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLC 93
Query: 130 TTEKDEL----YLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNT 185
D ++ + E + + +K Q PL +V+ YQ+C AL ++H
Sbjct: 94 VLMSDWFNFHGHMCIAFELLGKNTFEFLKE--NNFQPYPLPHVRHMAYQLCHALRFLHEN 151
Query: 186 IGVCHRDIKPQNLLV---------NPHTH---------QLKLCDFGSAKVLVKGEPNISY 227
+ H D+KP+N+L N H +++ DFGSA E + +
Sbjct: 152 -QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF--DHEHHTTI 208
Query: 228 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLG 285
+ +R+YR PE+I + D+WS GC+L E G LF + LV + K+LG
Sbjct: 209 VATRHYRPPEVILELG-WAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILG 265
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 115/277 (41%), Gaps = 48/277 (17%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTM-------RLLDHPNVVSLKH 125
+G G F F+ +T E A K V + K + + M R L H +VV H
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF-H 105
Query: 126 CFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNT 185
FF +D ++ +VLE R + +K + + + Y QI Y+H
Sbjct: 106 GFF----EDNDFVFVVLELC---RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN 158
Query: 186 IGVCHRDIKPQNLLVNPHTHQLKLCDFGSA-KVLVKGEPNISYICSRYYRAPELIFGATE 244
V HRD+K NL +N ++K+ DFG A KV GE + Y APE +
Sbjct: 159 -RVIHRDLKLGNLFLN-EDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPE-VLSKKG 215
Query: 245 YTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF 304
++ +D+WS GC++ LL+G+P F E C+ Y
Sbjct: 216 HSFEVDVWSIGCIMYTLLVGKPPF----------------------ETSCLKETYL---- 249
Query: 305 PQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRST 341
+IK + + K + P A L+ ++LQ P R T
Sbjct: 250 -RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPT 283
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 116/277 (41%), Gaps = 48/277 (17%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYK--NRELQTM-----RLLDHPNVVSLKH 125
+G G F F+ +T E A K V + K RE +M R L H +VV H
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF-H 81
Query: 126 CFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNT 185
FF +D ++ +VLE R + +K + + + Y QI Y+H
Sbjct: 82 GFF----EDNDFVFVVLELC---RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN 134
Query: 186 IGVCHRDIKPQNLLVNPHTHQLKLCDFGSA-KVLVKGEPNISYICSRYYRAPELIFGATE 244
V HRD+K NL +N ++K+ DFG A KV GE + Y APE +
Sbjct: 135 -RVIHRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPE-VLSKKG 191
Query: 245 YTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF 304
++ +D+WS GC++ LL+G+P F E C+ Y
Sbjct: 192 HSFEVDVWSIGCIMYTLLVGKPPF----------------------ETSCLKETYL---- 225
Query: 305 PQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRST 341
+IK + + K + P A L+ ++LQ P R T
Sbjct: 226 -RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPT 259
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 125/271 (46%), Gaps = 23/271 (8%)
Query: 56 GKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLL 115
GK +P ++ Y ++G G FG V+ + VAIK V +D+ EL +
Sbjct: 16 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 74
Query: 116 DHPNVVSLKHC---------FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLI 166
VV LK E+ + ++ L+LE PE V + +++R L
Sbjct: 75 PM-EVVLLKKVSSGFSGVIRLLDWFERPDSFV-LILER-PEPVQDLFDF---ITERGALQ 128
Query: 167 --YVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN 224
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K
Sbjct: 129 EELARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVY 186
Query: 225 ISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKV 283
+ +R Y PE I + + +WS G +L +++ G P E + V +
Sbjct: 187 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR 246
Query: 284 LGTPTREEIK-CMNPNYTEF-KFPQIKAHPW 312
+ + + I+ C+ ++ F +I+ HPW
Sbjct: 247 VSSECQHLIRWCLALRPSDRPTFEEIQNHPW 277
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 125/271 (46%), Gaps = 23/271 (8%)
Query: 56 GKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLL 115
GK +P ++ Y ++G G FG V+ + VAIK V +D+ EL +
Sbjct: 29 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 87
Query: 116 DHPNVVSLKHC---------FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLI 166
VV LK E+ + ++ L+LE PE V + +++R L
Sbjct: 88 PM-EVVLLKKVSSGFSGVIRLLDWFERPDSFV-LILER-PEPVQDLFDF---ITERGALQ 141
Query: 167 --YVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN 224
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K
Sbjct: 142 EELARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVY 199
Query: 225 ISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKV 283
+ +R Y PE I + + +WS G +L +++ G P E + V +
Sbjct: 200 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQR 259
Query: 284 LGTPTREEIK-CMNPNYTEF-KFPQIKAHPW 312
+ + + I+ C+ ++ F +I+ HPW
Sbjct: 260 VSSECQHLIRWCLALRPSDRPTFEEIQNHPW 290
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 125/271 (46%), Gaps = 23/271 (8%)
Query: 56 GKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLL 115
GK +P ++ Y ++G G FG V+ + VAIK V +D+ EL +
Sbjct: 28 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 86
Query: 116 DHPNVVSLKHC---------FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLI 166
VV LK E+ + ++ L+LE PE V + +++R L
Sbjct: 87 PM-EVVLLKKVSSGFSGVIRLLDWFERPDSFV-LILER-PEPVQDLFDF---ITERGALQ 140
Query: 167 --YVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN 224
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K
Sbjct: 141 EELARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVY 198
Query: 225 ISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKV 283
+ +R Y PE I + + +WS G +L +++ G P E + V +
Sbjct: 199 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQR 258
Query: 284 LGTPTREEIK-CMNPNYTEF-KFPQIKAHPW 312
+ + + I+ C+ ++ F +I+ HPW
Sbjct: 259 VSSECQHLIRWCLALRPSDRPTFEEIQNHPW 289
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 125/271 (46%), Gaps = 23/271 (8%)
Query: 56 GKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLL 115
GK +P ++ Y ++G G FG V+ + VAIK V +D+ EL +
Sbjct: 15 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 73
Query: 116 DHPNVVSLKHC---------FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLI 166
VV LK E+ + ++ L+LE PE V + +++R L
Sbjct: 74 PM-EVVLLKKVSSGFSGVIRLLDWFERPDSFV-LILER-PEPVQDLFDF---ITERGALQ 127
Query: 167 --YVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN 224
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K
Sbjct: 128 EELARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVY 185
Query: 225 ISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKV 283
+ +R Y PE I + + +WS G +L +++ G P E + V +
Sbjct: 186 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR 245
Query: 284 LGTPTREEIK-CMNPNYTEF-KFPQIKAHPW 312
+ + + I+ C+ ++ F +I+ HPW
Sbjct: 246 VSSECQHLIRWCLALRPSDRPTFEEIQNHPW 276
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 125/271 (46%), Gaps = 23/271 (8%)
Query: 56 GKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLL 115
GK +P ++ Y ++G G FG V+ + VAIK V +D+ EL +
Sbjct: 35 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 93
Query: 116 DHPNVVSLKHC---------FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLI 166
VV LK E+ + ++ L+LE PE V + +++R L
Sbjct: 94 PM-EVVLLKKVSSGFSGVIRLLDWFERPDSFV-LILER-PEPVQDLFDF---ITERGALQ 147
Query: 167 --YVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN 224
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K
Sbjct: 148 EELARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVY 205
Query: 225 ISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKV 283
+ +R Y PE I + + +WS G +L +++ G P E + V +
Sbjct: 206 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR 265
Query: 284 LGTPTREEIK-CMNPNYTEF-KFPQIKAHPW 312
+ + + I+ C+ ++ F +I+ HPW
Sbjct: 266 VSSECQHLIRWCLALRPSDRPTFEEIQNHPW 296
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 100/220 (45%), Gaps = 22/220 (10%)
Query: 62 KQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTM-------RL 114
K + +Y + +G G+F VV + TG A K++ K+ R+ Q + R
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFA-AKIINTKKLSARDFQKLEREARICRK 61
Query: 115 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVI-KHHYKMSQRMPLIYVKLYFY 173
L HPN+V L S E+ YL L E ++ + Y + I
Sbjct: 62 LQHPNIVRLHD---SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ------ 112
Query: 174 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTH--QLKLCDFGSAKVLVKGEPNISYICSR 231
QI ++AY H+ G+ HR++KP+NLL+ +KL DFG A + E + +
Sbjct: 113 QILESIAYCHSN-GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTP 171
Query: 232 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGE 271
Y +PE + Y+ +DIW+ G +L LL+G P F E
Sbjct: 172 GYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPFWDE 210
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 125/271 (46%), Gaps = 23/271 (8%)
Query: 56 GKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLL 115
GK +P ++ Y ++G G FG V+ + VAIK V +D+ EL +
Sbjct: 28 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 86
Query: 116 DHPNVVSLKHC---------FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLI 166
VV LK E+ + ++ L+LE PE V + +++R L
Sbjct: 87 PM-EVVLLKKVSSGFSGVIRLLDWFERPDSFV-LILER-PEPVQDLFDF---ITERGALQ 140
Query: 167 --YVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN 224
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K
Sbjct: 141 EELARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVY 198
Query: 225 ISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKV 283
+ +R Y PE I + + +WS G +L +++ G P E + V +
Sbjct: 199 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQR 258
Query: 284 LGTPTREEIK-CMNPNYTEF-KFPQIKAHPW 312
+ + + I+ C+ ++ F +I+ HPW
Sbjct: 259 VSSECQHLIRWCLALRPSDRPTFEEIQNHPW 289
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 125/271 (46%), Gaps = 23/271 (8%)
Query: 56 GKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLL 115
GK +P ++ Y ++G G FG V+ + VAIK V +D+ EL +
Sbjct: 29 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 87
Query: 116 DHPNVVSLKHC---------FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLI 166
VV LK E+ + ++ L+LE PE V + +++R L
Sbjct: 88 PM-EVVLLKKVSSGFSGVIRLLDWFERPDSFV-LILER-PEPVQDLFDF---ITERGALQ 141
Query: 167 --YVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN 224
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K
Sbjct: 142 EELARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVY 199
Query: 225 ISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKV 283
+ +R Y PE I + + +WS G +L +++ G P E + V +
Sbjct: 200 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQR 259
Query: 284 LGTPTREEIK-CMNPNYTEF-KFPQIKAHPW 312
+ + + I+ C+ ++ F +I+ HPW
Sbjct: 260 VSSECQHLIRWCLALRPSDRPTFEEIQNHPW 290
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 125/271 (46%), Gaps = 23/271 (8%)
Query: 56 GKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLL 115
GK +P ++ Y ++G G FG V+ + VAIK V +D+ EL +
Sbjct: 43 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 101
Query: 116 DHPNVVSLKHC---------FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLI 166
VV LK E+ + ++ L+LE PE V + +++R L
Sbjct: 102 PM-EVVLLKKVSSGFSGVIRLLDWFERPDSFV-LILER-PEPVQDLFDF---ITERGALQ 155
Query: 167 --YVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN 224
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K
Sbjct: 156 EELARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVY 213
Query: 225 ISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKV 283
+ +R Y PE I + + +WS G +L +++ G P E + V +
Sbjct: 214 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR 273
Query: 284 LGTPTREEIK-CMNPNYTEF-KFPQIKAHPW 312
+ + + I+ C+ ++ F +I+ HPW
Sbjct: 274 VSSECQHLIRWCLALRPSDRPTFEEIQNHPW 304
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 100/221 (45%), Gaps = 22/221 (9%)
Query: 62 KQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTM-------RL 114
K + +Y + +G G+F VV + TG A K++ K+ R+ Q + R
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFA-AKIINTKKLSARDFQKLEREARICRK 60
Query: 115 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVI-KHHYKMSQRMPLIYVKLYFY 173
L HPN+V L S E+ YL L E ++ + Y + I
Sbjct: 61 LQHPNIVRLHD---SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ------ 111
Query: 174 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTH--QLKLCDFGSAKVLVKGEPNISYICSR 231
QI ++AY H+ G+ HR++KP+NLL+ +KL DFG A + E + +
Sbjct: 112 QILESIAYCHSN-GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTP 170
Query: 232 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGES 272
Y +PE + Y+ +DIW+ G +L LL+G P F E
Sbjct: 171 GYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPFWDED 210
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 125/271 (46%), Gaps = 23/271 (8%)
Query: 56 GKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLL 115
GK +P ++ Y ++G G FG V+ + VAIK V +D+ EL +
Sbjct: 28 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 86
Query: 116 DHPNVVSLKHC---------FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLI 166
VV LK E+ + ++ L+LE PE V + +++R L
Sbjct: 87 PM-EVVLLKKVSSGFSGVIRLLDWFERPDSFV-LILER-PEPVQDLFDF---ITERGALQ 140
Query: 167 --YVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN 224
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K
Sbjct: 141 EELARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVY 198
Query: 225 ISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKV 283
+ +R Y PE I + + +WS G +L +++ G P E + V +
Sbjct: 199 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR 258
Query: 284 LGTPTREEIK-CMNPNYTEF-KFPQIKAHPW 312
+ + + I+ C+ ++ F +I+ HPW
Sbjct: 259 VSSECQHLIRWCLALRPSDRPTFEEIQNHPW 289
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 100/220 (45%), Gaps = 22/220 (10%)
Query: 62 KQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTM-------RL 114
K + +Y + +G G+F VV + TG A K++ K+ R+ Q + R
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFA-AKIINTKKLSARDFQKLEREARICRK 61
Query: 115 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVI-KHHYKMSQRMPLIYVKLYFY 173
L HPN+V L S E+ YL L E ++ + Y + I
Sbjct: 62 LQHPNIVRLHD---SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ------ 112
Query: 174 QICRALAYIHNTIGVCHRDIKPQNLLVNPHTH--QLKLCDFGSAKVLVKGEPNISYICSR 231
QI ++AY H+ G+ HR++KP+NLL+ +KL DFG A + E + +
Sbjct: 113 QILESIAYCHSN-GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTP 171
Query: 232 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGE 271
Y +PE + Y+ +DIW+ G +L LL+G P F E
Sbjct: 172 GYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPFWDE 210
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 130/288 (45%), Gaps = 43/288 (14%)
Query: 60 QPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN-------RELQTM 112
QP ++ RV+G G FG V + TG+ A KK+ + + K E Q +
Sbjct: 179 QPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQIL 238
Query: 113 RLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQR-MPLIYVKLY 171
++ VVSL + + + KD L L L L + H Y M Q P Y
Sbjct: 239 EKVNSRFVVSLAYAYET---KDALCLVLTLMNGGDLKF----HIYHMGQAGFPEARAVFY 291
Query: 172 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 231
+IC L +H + +RD+KP+N+L++ H H +++ D G A + +G+ + +
Sbjct: 292 AAEICCGLEDLHRE-RIVYRDLKPENILLDDHGH-IRISDLGLAVHVPEGQTIKGRVGTV 349
Query: 232 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE 291
Y APE++ YT + D W+ GC+L E++ GQ F Q + IK REE
Sbjct: 350 GYMAPEVV-KNERYTFSPDWWALGCLLYEMIAGQSPF------QQRKKKIK------REE 396
Query: 292 IKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
++ + +K P + + +R P+A L S+LL P R
Sbjct: 397 VERL-----------VKEVP--EEYSERFSPQARSLCSQLLCKDPAER 431
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 116/269 (43%), Gaps = 50/269 (18%)
Query: 61 PKQTISYMAERVVGHGSFGVVFQAKC-LETG--EAVAIKKVLQDKR--YKNRELQTMRLL 115
P+ + + E +G G+F V+ A L+ G E +A+K ++ ELQ + +
Sbjct: 17 PQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVA 76
Query: 116 D-HPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQ 174
NV+ +K+CF + ++ + + Y+ I + + V+ Y
Sbjct: 77 GGQDNVMGVKYCF-----RKNDHVVIAMPYLEHESFLDILNSLSFQE------VREYMLN 125
Query: 175 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAK----------VLVKGEP- 223
+ +AL IH G+ HRD+KP N L N + L DFG A+ V+ E
Sbjct: 126 LFKALKRIHQ-FGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQ 184
Query: 224 ------NISYIC-SRY-----------YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ 265
N IC SR +RAPE++ T AID+WSAG + LL G+
Sbjct: 185 QERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGR 244
Query: 266 -PLFPGESGVDQLVEIIKVLGTPTREEIK 293
P + + L +I+ + G +RE I+
Sbjct: 245 YPFYKASDDLTALAQIMTIRG--SRETIQ 271
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 101/209 (48%), Gaps = 31/209 (14%)
Query: 71 RVVGHGSFGVVFQAKCLE-----TGEAVAIKKVLQDKRYKNR-----ELQTMRLLDHPNV 120
R +G G FG V C + TGE VA+K + D ++R E+ +R L H ++
Sbjct: 20 RDLGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 121 VSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
+ K C EK L LV+EYVP R Y + L + L+ QIC +A
Sbjct: 79 IKYKGCCEDQGEKS---LQLVMEYVPLGSLR----DYLPRHSIGLAQLLLFAQQICEGMA 131
Query: 181 YIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-------YY 233
Y+H+ + HR++ +N+L++ + +K+ DFG AK + +G Y R ++
Sbjct: 132 YLHSQHYI-HRNLAARNVLLD-NDRLVKIGDFGLAKAVPEGH---EYYRVREDGDSPVFW 186
Query: 234 RAPELIFGATEYTAAIDIWSAGCVLAELL 262
APE + Y A+ D+WS G L ELL
Sbjct: 187 YAPECLKEYKFYYAS-DVWSFGVTLYELL 214
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 115/249 (46%), Gaps = 44/249 (17%)
Query: 72 VVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQT-------MRLLDHPNVVSLK 124
V+G G+FG V +A+ AIKK+ R+ +L T + L+H VV
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKI----RHTEEKLSTILSEVMLLASLNHQYVVRYY 68
Query: 125 HCFFS--------TTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQIC 176
+ T K + L + +EY + H ++Q+ Y +L F QI
Sbjct: 69 AAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDE-YWRL-FRQIL 126
Query: 177 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAK-------VLVKGEPNI---- 225
AL+YIH+ G+ HRD+KP N+ ++ + +K+ DFG AK +L N+
Sbjct: 127 EALSYIHSQ-GIIHRDLKPMNIFID-ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 226 ----SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 281
S I + Y A E++ G Y ID++S G + E+ ++P +G+++ V I+
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM-----IYPFSTGMER-VNIL 238
Query: 282 KVLGTPTRE 290
K L + + E
Sbjct: 239 KKLRSVSIE 247
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 115/249 (46%), Gaps = 44/249 (17%)
Query: 72 VVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQT-------MRLLDHPNVVSLK 124
V+G G+FG V +A+ AIKK+ R+ +L T + L+H VV
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKI----RHTEEKLSTILSEVMLLASLNHQYVVRYY 68
Query: 125 HCFFS--------TTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQIC 176
+ T K + L + +EY + H ++Q+ Y +L F QI
Sbjct: 69 AAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDE-YWRL-FRQIL 126
Query: 177 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAK-------VLVKGEPNI---- 225
AL+YIH+ G+ HRD+KP N+ ++ + +K+ DFG AK +L N+
Sbjct: 127 EALSYIHSQ-GIIHRDLKPMNIFID-ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 226 ----SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 281
S I + Y A E++ G Y ID++S G + E+ ++P +G+++ V I+
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM-----IYPFSTGMER-VNIL 238
Query: 282 KVLGTPTRE 290
K L + + E
Sbjct: 239 KKLRSVSIE 247
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 130/288 (45%), Gaps = 43/288 (14%)
Query: 60 QPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN-------RELQTM 112
QP ++ RV+G G FG V + TG+ A KK+ + + K E Q +
Sbjct: 179 QPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQIL 238
Query: 113 RLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQR-MPLIYVKLY 171
++ VVSL + + + KD L L L L + H Y M Q P Y
Sbjct: 239 EKVNSRFVVSLAYAYET---KDALCLVLTLMNGGDLKF----HIYHMGQAGFPEARAVFY 291
Query: 172 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 231
+IC L +H + +RD+KP+N+L++ H H +++ D G A + +G+ + +
Sbjct: 292 AAEICCGLEDLHRE-RIVYRDLKPENILLDDHGH-IRISDLGLAVHVPEGQTIKGRVGTV 349
Query: 232 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE 291
Y APE++ YT + D W+ GC+L E++ GQ F Q + IK REE
Sbjct: 350 GYMAPEVV-KNERYTFSPDWWALGCLLYEMIAGQSPF------QQRKKKIK------REE 396
Query: 292 IKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
++ + +K P + + +R P+A L S+LL P R
Sbjct: 397 VERL-----------VKEVP--EEYSERFSPQARSLCSQLLCKDPAER 431
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 124/271 (45%), Gaps = 23/271 (8%)
Query: 56 GKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLL 115
GK +P ++ Y ++G G FG V+ + VAIK V +D+ EL +
Sbjct: 29 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 87
Query: 116 DHPNVVSLKHC---------FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLI 166
VV LK E+ + ++ L+LE PE V + +++R L
Sbjct: 88 PM-EVVLLKKVSSGFSGVIRLLDWFERPDSFV-LILER-PEPVQDLFDF---ITERGALQ 141
Query: 167 --YVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN 224
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K
Sbjct: 142 EELARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVY 199
Query: 225 ISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKV 283
+ +R Y PE I + + +WS G +L +++ G P E + V +
Sbjct: 200 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQR 259
Query: 284 LGTPTREEIK-CMNPNYTEF-KFPQIKAHPW 312
+ + I+ C+ ++ F +I+ HPW
Sbjct: 260 VSXECQHLIRWCLALRPSDRPTFEEIQNHPW 290
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 124/271 (45%), Gaps = 23/271 (8%)
Query: 56 GKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLL 115
GK +P ++ Y ++G G FG V+ + VAIK V +D+ EL +
Sbjct: 28 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 86
Query: 116 DHPNVVSLKHC---------FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLI 166
VV LK E+ + ++ L+LE PE V + +++R L
Sbjct: 87 PM-EVVLLKKVSSGFSGVIRLLDWFERPDSFV-LILER-PEPVQDLFDF---ITERGALQ 140
Query: 167 --YVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN 224
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K
Sbjct: 141 EELARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVY 198
Query: 225 ISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKV 283
+ +R Y PE I + + +WS G +L +++ G P E + V +
Sbjct: 199 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQR 258
Query: 284 LGTPTREEIK-CMNPNYTEF-KFPQIKAHPW 312
+ + I+ C+ ++ F +I+ HPW
Sbjct: 259 VSXECQHLIRWCLALRPSDRPTFEEIQNHPW 289
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 124/271 (45%), Gaps = 23/271 (8%)
Query: 56 GKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLL 115
GK +P ++ Y ++G G FG V+ + VAIK V +D+ EL +
Sbjct: 29 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 87
Query: 116 DHPNVVSLKHC---------FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLI 166
VV LK E+ + ++ L+LE PE V + +++R L
Sbjct: 88 PM-EVVLLKKVSSGFSGVIRLLDWFERPDSFV-LILER-PEPVQDLFDF---ITERGALQ 141
Query: 167 --YVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN 224
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K
Sbjct: 142 EELARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVY 199
Query: 225 ISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKV 283
+ +R Y PE I + + +WS G +L +++ G P E + V +
Sbjct: 200 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQR 259
Query: 284 LGTPTREEIK-CMNPNYTEF-KFPQIKAHPW 312
+ + I+ C+ ++ F +I+ HPW
Sbjct: 260 VSXECQHLIRWCLALRPSDRPTFEEIQNHPW 290
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 124/271 (45%), Gaps = 23/271 (8%)
Query: 56 GKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLL 115
GK +P ++ Y ++G G FG V+ + VAIK V +D+ EL +
Sbjct: 16 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 74
Query: 116 DHPNVVSLKHC---------FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLI 166
VV LK E+ + ++ L+LE PE V + +++R L
Sbjct: 75 PM-EVVLLKKVSSGFSGVIRLLDWFERPDSFV-LILER-PEPVQDLFDF---ITERGALQ 128
Query: 167 --YVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN 224
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K
Sbjct: 129 EELARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVY 186
Query: 225 ISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKV 283
+ +R Y PE I + + +WS G +L +++ G P E + V +
Sbjct: 187 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR 246
Query: 284 LGTPTREEIK-CMNPNYTEF-KFPQIKAHPW 312
+ + I+ C+ ++ F +I+ HPW
Sbjct: 247 VSXECQHLIRWCLALRPSDRPTFEEIQNHPW 277
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 124/271 (45%), Gaps = 23/271 (8%)
Query: 56 GKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLL 115
GK +P ++ Y ++G G FG V+ + VAIK V +D+ EL +
Sbjct: 43 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 101
Query: 116 DHPNVVSLKHC---------FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLI 166
VV LK E+ + ++ L+LE PE V + +++R L
Sbjct: 102 PM-EVVLLKKVSSGFSGVIRLLDWFERPDSFV-LILER-PEPVQDLFDF---ITERGALQ 155
Query: 167 --YVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN 224
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K
Sbjct: 156 EELARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVY 213
Query: 225 ISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKV 283
+ +R Y PE I + + +WS G +L +++ G P E + V +
Sbjct: 214 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR 273
Query: 284 LGTPTREEIK-CMNPNYTEF-KFPQIKAHPW 312
+ + I+ C+ ++ F +I+ HPW
Sbjct: 274 VSXECQHLIRWCLALRPSDRPTFEEIQNHPW 304
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 124/271 (45%), Gaps = 23/271 (8%)
Query: 56 GKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLL 115
GK +P ++ Y ++G G FG V+ + VAIK V +D+ EL +
Sbjct: 15 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 73
Query: 116 DHPNVVSLKHC---------FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLI 166
VV LK E+ + ++ L+LE PE V + +++R L
Sbjct: 74 PM-EVVLLKKVSSGFSGVIRLLDWFERPDSFV-LILER-PEPVQDLFDF---ITERGALQ 127
Query: 167 --YVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN 224
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K
Sbjct: 128 EELARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVY 185
Query: 225 ISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKV 283
+ +R Y PE I + + +WS G +L +++ G P E + V +
Sbjct: 186 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR 245
Query: 284 LGTPTREEIK-CMNPNYTEF-KFPQIKAHPW 312
+ + I+ C+ ++ F +I+ HPW
Sbjct: 246 VSXECQHLIRWCLALRPSDRPTFEEIQNHPW 276
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 124/271 (45%), Gaps = 23/271 (8%)
Query: 56 GKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLL 115
GK +P ++ Y ++G G FG V+ + VAIK V +D+ EL +
Sbjct: 48 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 106
Query: 116 DHPNVVSLKHC---------FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLI 166
VV LK E+ + ++ L+LE PE V + +++R L
Sbjct: 107 PM-EVVLLKKVSSGFSGVIRLLDWFERPDSFV-LILER-PEPVQDLFDF---ITERGALQ 160
Query: 167 --YVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN 224
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K
Sbjct: 161 EELARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVY 218
Query: 225 ISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKV 283
+ +R Y PE I + + +WS G +L +++ G P E + V +
Sbjct: 219 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR 278
Query: 284 LGTPTREEIK-CMNPNYTEF-KFPQIKAHPW 312
+ + I+ C+ ++ F +I+ HPW
Sbjct: 279 VSXECQHLIRWCLALRPSDRPTFEEIQNHPW 309
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 104/220 (47%), Gaps = 20/220 (9%)
Query: 56 GKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLL 115
GK +P ++ Y ++G G FG V+ + VAIK V +D+ EL +
Sbjct: 16 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 74
Query: 116 DHPNVVSLKHC---------FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLI 166
VV LK E+ + ++ L+LE PE V + +++R L
Sbjct: 75 PM-EVVLLKKVSSGFSGVIRLLDWFERPDSFV-LILER-PEPVQDLFDF---ITERGALQ 128
Query: 167 --YVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN 224
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K
Sbjct: 129 EELARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVY 186
Query: 225 ISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLG 264
+ +R Y PE I + + +WS G +L +++ G
Sbjct: 187 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 129/299 (43%), Gaps = 58/299 (19%)
Query: 64 TISYMAERVVGHGSFGVV-----------FQAKCLETGEAVAIKKVLQDKRYKNRELQTM 112
T Y +G G+F VV + AK + T + A +D + RE +
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSA-----RDHQKLEREARIC 84
Query: 113 RLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVI-KHHYKMSQRMPLIYVKLY 171
RLL HPN+V L S +E+ YL L E ++ + +Y + I+
Sbjct: 85 RLLKHPNIVRLHD---SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIH---- 137
Query: 172 FYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTH--QLKLCDFGSAKVLVKGEPN--ISY 227
QI ++ +IH + HRD+KP+NLL+ +KL DFG A + V+GE +
Sbjct: 138 --QILESVNHIHQH-DIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFGF 193
Query: 228 ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 287
+ Y +PE + Y +DIW+ G +L LL+G P F E +L + IK
Sbjct: 194 AGTPGYLSPE-VLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQ-HKLYQQIKA---- 247
Query: 288 TREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
+ FP + W + PEA +L++++L +P R TA A+
Sbjct: 248 ------------GAYDFPSPE---WDTV-----TPEAKNLINQMLTINPAKRITADQAL 286
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 100/209 (47%), Gaps = 31/209 (14%)
Query: 71 RVVGHGSFGVVFQAKCLE-----TGEAVAIKKVLQDKRYKNR-----ELQTMRLLDHPNV 120
R +G G FG V C + TGE VA+K + D ++R E+ +R L H ++
Sbjct: 20 RDLGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 121 VSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
+ K C EK L LV+EYVP R Y + L + L+ QIC +A
Sbjct: 79 IKYKGCCEDQGEKS---LQLVMEYVPLGSLR----DYLPRHSIGLAQLLLFAQQICEGMA 131
Query: 181 YIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-------YY 233
Y+H + HR++ +N+L++ + +K+ DFG AK + +G Y R ++
Sbjct: 132 YLHAQHYI-HRNLAARNVLLD-NDRLVKIGDFGLAKAVPEGH---EYYRVREDGDSPVFW 186
Query: 234 RAPELIFGATEYTAAIDIWSAGCVLAELL 262
APE + Y A+ D+WS G L ELL
Sbjct: 187 YAPECLKEYKFYYAS-DVWSFGVTLYELL 214
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 100/209 (47%), Gaps = 31/209 (14%)
Query: 71 RVVGHGSFGVVFQAKCLE-----TGEAVAIKKVLQDKRYKNR-----ELQTMRLLDHPNV 120
R +G G FG V C + TGE VA+K + D ++R E+ +R L H ++
Sbjct: 37 RDLGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHI 95
Query: 121 VSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
+ K C + L LV+EYVP R Y + L + L+ QIC +A
Sbjct: 96 IKYKGC---CEDAGAASLQLVMEYVPLGSLR----DYLPRHSIGLAQLLLFAQQICEGMA 148
Query: 181 YIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKG-------EPNISYICSRYY 233
Y+H + HRD+ +N+L++ + +K+ DFG AK + +G E S + ++
Sbjct: 149 YLHAQHYI-HRDLAARNVLLD-NDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPV---FW 203
Query: 234 RAPELIFGATEYTAAIDIWSAGCVLAELL 262
APE + Y A+ D+WS G L ELL
Sbjct: 204 YAPECLKEYKFYYAS-DVWSFGVTLYELL 231
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 124/282 (43%), Gaps = 58/282 (20%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQD----------KRYKNRELQTMRLLDHPNV 120
+++G G+FG V + TG A+K + ++ ++R LQ R HP +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR---HPFL 67
Query: 121 VSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRA 178
+LK+ F T ++ L V+EY E + + +R + Y +I A
Sbjct: 68 TALKYAF-QTHDR----LCFVMEYANGGELFFHLSRERVFTEER-----ARFYGAEIVSA 117
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-YYRAPE 237
L Y+H+ V +RDIK +NL+++ H +K+ DFG K + + C Y APE
Sbjct: 118 LEYLHSR-DVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKXFCGTPEYLAPE 175
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 297
+ +Y A+D W G V+ E++ G+ F + ++L E+I + EEI+
Sbjct: 176 -VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM------EEIR---- 223
Query: 298 NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
F + + PEA L++ LL+ P R
Sbjct: 224 ------------------FPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 124/282 (43%), Gaps = 58/282 (20%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQD----------KRYKNRELQTMRLLDHPNV 120
+++G G+FG V + TG A+K + ++ ++R LQ R HP +
Sbjct: 16 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR---HPFL 72
Query: 121 VSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRA 178
+LK+ F T ++ L V+EY E + + +R + Y +I A
Sbjct: 73 TALKYAF-QTHDR----LCFVMEYANGGELFFHLSRERVFTEER-----ARFYGAEIVSA 122
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-YYRAPE 237
L Y+H+ V +RDIK +NL+++ H +K+ DFG K + + C Y APE
Sbjct: 123 LEYLHSR-DVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKXFCGTPEYLAPE 180
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 297
+ +Y A+D W G V+ E++ G+ F + ++L E+I + EEI+
Sbjct: 181 -VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM------EEIR---- 228
Query: 298 NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
F + + PEA L++ LL+ P R
Sbjct: 229 ------------------FPRTLSPEAKSLLAGLLKKDPKQR 252
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 97/205 (47%), Gaps = 26/205 (12%)
Query: 73 VGHGSFGVV----FQAKCLETGEAVAIKKVLQD----KRYKNRELQTMRLLDHPNVVSLK 124
+G G+FG V + TG VA+K++ +R RE+Q ++ L +V +
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 125 HCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN 184
+ + L LV+EY+P R ++ R+ + LY QIC+ + Y+ +
Sbjct: 78 GVSYGPGRQS---LRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLGS 132
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL-------VKGEPNISYICSRYYRAPE 237
V HRD+ +N+LV H +K+ DFG AK+L V EP S I ++ APE
Sbjct: 133 RRCV-HRDLAARNILVESEAH-VKIADFGLAKLLPLDKDYYVVREPGQSPI---FWYAPE 187
Query: 238 LIFGATEYTAAIDIWSAGCVLAELL 262
+ ++ D+WS G VL EL
Sbjct: 188 SL-SDNIFSRQSDVWSFGVVLYELF 211
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 97/205 (47%), Gaps = 26/205 (12%)
Query: 73 VGHGSFGVV----FQAKCLETGEAVAIKKVLQD----KRYKNRELQTMRLLDHPNVVSLK 124
+G G+FG V + TG VA+K++ +R RE+Q ++ L +V +
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 125 HCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN 184
+ + L LV+EY+P R ++ R+ + LY QIC+ + Y+ +
Sbjct: 75 GVSYGPGRPE---LRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLGS 129
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL-------VKGEPNISYICSRYYRAPE 237
V HRD+ +N+LV H +K+ DFG AK+L V EP S I ++ APE
Sbjct: 130 RRCV-HRDLAARNILVESEAH-VKIADFGLAKLLPLDKDXXVVREPGQSPI---FWYAPE 184
Query: 238 LIFGATEYTAAIDIWSAGCVLAELL 262
+ ++ D+WS G VL EL
Sbjct: 185 SL-SDNIFSRQSDVWSFGVVLYELF 208
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 97/205 (47%), Gaps = 26/205 (12%)
Query: 73 VGHGSFGVV----FQAKCLETGEAVAIKKVLQD----KRYKNRELQTMRLLDHPNVVSLK 124
+G G+FG V + TG VA+K++ +R RE+Q ++ L +V +
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 125 HCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN 184
+ + L LV+EY+P R ++ R+ + LY QIC+ + Y+ +
Sbjct: 91 GVSYGPGRQS---LRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLGS 145
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL-------VKGEPNISYICSRYYRAPE 237
V HRD+ +N+LV H +K+ DFG AK+L V EP S I ++ APE
Sbjct: 146 RRCV-HRDLAARNILVESEAH-VKIADFGLAKLLPLDKDYYVVREPGQSPI---FWYAPE 200
Query: 238 LIFGATEYTAAIDIWSAGCVLAELL 262
+ ++ D+WS G VL EL
Sbjct: 201 SL-SDNIFSRQSDVWSFGVVLYELF 224
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 97/205 (47%), Gaps = 26/205 (12%)
Query: 73 VGHGSFGVV----FQAKCLETGEAVAIKKVLQD----KRYKNRELQTMRLLDHPNVVSLK 124
+G G+FG V + TG VA+K++ +R RE+Q ++ L +V +
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 125 HCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN 184
+ + L LV+EY+P R ++ R+ + LY QIC+ + Y+ +
Sbjct: 79 GVSYGPGRQS---LRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLGS 133
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL-------VKGEPNISYICSRYYRAPE 237
V HRD+ +N+LV H +K+ DFG AK+L V EP S I ++ APE
Sbjct: 134 RRCV-HRDLAARNILVESEAH-VKIADFGLAKLLPLDKDYYVVREPGQSPI---FWYAPE 188
Query: 238 LIFGATEYTAAIDIWSAGCVLAELL 262
+ ++ D+WS G VL EL
Sbjct: 189 SL-SDNIFSRQSDVWSFGVVLYELF 212
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 124/282 (43%), Gaps = 58/282 (20%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQD----------KRYKNRELQTMRLLDHPNV 120
+++G G+FG V + TG A+K + ++ ++R LQ R HP +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR---HPFL 67
Query: 121 VSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRA 178
+LK+ F T ++ L V+EY E + + +R + Y +I A
Sbjct: 68 TALKYAF-QTHDR----LCFVMEYANGGELFFHLSRERVFTEER-----ARFYGAEIVSA 117
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-YYRAPE 237
L Y+H+ V +RDIK +NL+++ H +K+ DFG K + + C Y APE
Sbjct: 118 LEYLHSR-DVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKXFCGTPEYLAPE 175
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 297
+ +Y A+D W G V+ E++ G+ F + ++L E+I + EEI+
Sbjct: 176 -VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM------EEIR---- 223
Query: 298 NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
F + + PEA L++ LL+ P R
Sbjct: 224 ------------------FPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 131/298 (43%), Gaps = 46/298 (15%)
Query: 68 MAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN----RELQTM-RLLDHPNVVS 122
+ ++G G++ V A L+ G+ A+K + + + RE++T+ + + N++
Sbjct: 16 LTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILE 75
Query: 123 LKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAY 181
L F +D+ LV E + ++ I+ ++R V+ + AL +
Sbjct: 76 LIEFF-----EDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVR----DVAAALDF 126
Query: 182 IHNTIGVCHRDIKPQNLLVNP--HTHQLKLCDF--GSAKVLVKG-----EPNISYIC-SR 231
+H T G+ HRD+KP+N+L +K+CDF GS L P ++ C S
Sbjct: 127 LH-TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSA 185
Query: 232 YYRAPELIF----GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVD---QLVEIIKVL 284
Y APE++ AT Y D+WS G VL +L G P F G G D E+ +V
Sbjct: 186 EYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVC 245
Query: 285 GTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTA 342
E I+ +++FP W I EA DL+S+LL R +A
Sbjct: 246 QNKLFESIQ-----EGKYEFPD---KDWAHI-----SSEAKDLISKLLVRDAKQRLSA 290
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 124/282 (43%), Gaps = 58/282 (20%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQD----------KRYKNRELQTMRLLDHPNV 120
+++G G+FG V + TG A+K + ++ ++R LQ R HP +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR---HPFL 67
Query: 121 VSLKHCFFSTTEKDELYLNLVLEYV--PETVHRVIKHHYKMSQRMPLIYVKLYFYQICRA 178
+LK+ F T ++ L V+EY E + + +R + Y +I A
Sbjct: 68 TALKYAF-QTHDR----LCFVMEYANGGELFFHLSRERVFTEER-----ARFYGAEIVSA 117
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-YYRAPE 237
L Y+H+ V +RDIK +NL+++ H +K+ DFG K + + C Y APE
Sbjct: 118 LEYLHSR-DVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKTFCGTPEYLAPE 175
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 297
+ +Y A+D W G V+ E++ G+ F + ++L E+I + EEI+
Sbjct: 176 -VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM------EEIR---- 223
Query: 298 NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
F + + PEA L++ LL+ P R
Sbjct: 224 ------------------FPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 124/282 (43%), Gaps = 58/282 (20%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQD----------KRYKNRELQTMRLLDHPNV 120
+++G G+FG V + TG A+K + ++ ++R LQ R HP +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR---HPFL 67
Query: 121 VSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRA 178
+LK+ F T ++ L V+EY E + + +R + Y +I A
Sbjct: 68 TALKYAF-QTHDR----LCFVMEYANGGELFFHLSRERVFTEER-----ARFYGAEIVSA 117
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-YYRAPE 237
L Y+H+ V +RDIK +NL+++ H +K+ DFG K + + C Y APE
Sbjct: 118 LEYLHSR-DVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKXFCGTPEYLAPE 175
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 297
+ +Y A+D W G V+ E++ G+ F + ++L E+I + EEI+
Sbjct: 176 -VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM------EEIR---- 223
Query: 298 NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
F + + PEA L++ LL+ P R
Sbjct: 224 ------------------FPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 101/207 (48%), Gaps = 25/207 (12%)
Query: 71 RVVGHGSFGVV----FQAKCLETGEAVAIKKVLQDKRYKN-----RELQTMRLLDHPNVV 121
R +G G FG V + + TGE VA+K + + + +E++ +R L H N+V
Sbjct: 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 86
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPETVHR--VIKHHYKMSQRMPLIYVKLYFYQICRAL 179
K TE + L++E++P + + K+ K++ + L Y QIC+ +
Sbjct: 87 KYKGI---CTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYA----VQICKGM 139
Query: 180 AYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR----YYRA 235
Y+ + V HRD+ +N+LV HQ+K+ DFG K + + + R ++ A
Sbjct: 140 DYLGSRQYV-HRDLAARNVLVESE-HQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA 197
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELL 262
PE + + Y A+ D+WS G L ELL
Sbjct: 198 PECLMQSKFYIAS-DVWSFGVTLHELL 223
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 124/270 (45%), Gaps = 23/270 (8%)
Query: 57 KNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLD 116
K +P ++ Y ++G G FG V+ + VAIK V +D+ EL +
Sbjct: 1 KEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 59
Query: 117 HPNVVSLKHC---------FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLI- 166
VV LK E+ + ++ L+LE PE V + +++R L
Sbjct: 60 M-EVVLLKKVSSGFSGVIRLLDWFERPDSFV-LILER-PEPVQDLFDF---ITERGALQE 113
Query: 167 -YVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI 225
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K
Sbjct: 114 ELARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYT 171
Query: 226 SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKVL 284
+ +R Y PE I + + +WS G +L +++ G P E + V + +
Sbjct: 172 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV 231
Query: 285 GTPTREEIK-CMNPNYTEF-KFPQIKAHPW 312
+ + I+ C+ ++ F +I+ HPW
Sbjct: 232 SSECQHLIRWCLALRPSDRPTFEEIQNHPW 261
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 124/282 (43%), Gaps = 58/282 (20%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQD----------KRYKNRELQTMRLLDHPNV 120
+++G G+FG V + TG A+K + ++ ++R LQ R HP +
Sbjct: 14 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR---HPFL 70
Query: 121 VSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRA 178
+LK+ F T ++ L V+EY E + + +R + Y +I A
Sbjct: 71 TALKYAF-QTHDR----LCFVMEYANGGELFFHLSRERVFTEER-----ARFYGAEIVSA 120
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-YYRAPE 237
L Y+H+ V +RDIK +NL+++ H +K+ DFG K + + C Y APE
Sbjct: 121 LEYLHSR-DVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKTFCGTPEYLAPE 178
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 297
+ +Y A+D W G V+ E++ G+ F + ++L E+I + EEI+
Sbjct: 179 -VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM------EEIR---- 226
Query: 298 NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
F + + PEA L++ LL+ P R
Sbjct: 227 ------------------FPRTLSPEAKSLLAGLLKKDPKQR 250
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 125/282 (44%), Gaps = 58/282 (20%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQD----------KRYKNRELQTMRLLDHPNV 120
+++G G+FG V + TG A+K + ++ ++R LQ R HP +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR---HPFL 67
Query: 121 VSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRA 178
+LK+ F T ++ L V+EY E + + +R + Y +I A
Sbjct: 68 TALKYAF-QTHDR----LCFVMEYANGGELFFHLSRERVFTEER-----ARFYGAEIVSA 117
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC-SRYYRAPE 237
L Y+H+ V +RDIK +NL+++ H +K+ DFG K + + C + Y APE
Sbjct: 118 LEYLHSR-DVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKTFCGTPEYLAPE 175
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 297
+ +Y A+D W G V+ E++ G+ F + ++L E+I + EEI+
Sbjct: 176 -VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM------EEIR---- 223
Query: 298 NYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLR 339
F + + PEA L++ LL+ P R
Sbjct: 224 ------------------FPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 19/218 (8%)
Query: 72 VVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQ-------TMRLLDHPNVVSLK 124
V+G GSFG V ++ T E A+K + +D ++ +++ + L P ++
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 86
Query: 125 HCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN 184
H F T ++ L V+EYV + +H + R + Y +I L ++ +
Sbjct: 87 HSCFQTMDR----LYFVMEYVNGGD---LMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQS 139
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC-SRYYRAPELIFGAT 243
G+ +RD+K N++++ H +K+ DFG K + C + Y APE+I
Sbjct: 140 K-GIIYRDLKLDNVMLDSEGH-IKIADFGMCKENIWDGVTTKXFCGTPDYIAPEII-AYQ 196
Query: 244 EYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 281
Y ++D W+ G +L E+L GQ F GE D+L + I
Sbjct: 197 PYGKSVDWWAFGVLLYEMLAGQAPFEGED-EDELFQSI 233
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 124/270 (45%), Gaps = 23/270 (8%)
Query: 57 KNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLD 116
K +P ++ Y ++G G FG V+ + VAIK V +D+ EL +
Sbjct: 2 KEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 117 HPNVVSLKHC---------FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLI- 166
VV LK E+ + ++ L+LE PE V + +++R L
Sbjct: 61 M-EVVLLKKVSSGFSGVIRLLDWFERPDSFV-LILER-PEPVQDLFDF---ITERGALQE 114
Query: 167 -YVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI 225
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K
Sbjct: 115 ELARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYT 172
Query: 226 SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKVL 284
+ +R Y PE I + + +WS G +L +++ G P E + V + +
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV 232
Query: 285 GTPTREEIK-CMNPNYTEF-KFPQIKAHPW 312
+ + I+ C+ ++ F +I+ HPW
Sbjct: 233 SSECQHLIRWCLALRPSDRPTFEEIQNHPW 262
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 124/270 (45%), Gaps = 23/270 (8%)
Query: 57 KNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLD 116
K +P ++ Y ++G G FG V+ + VAIK V +D+ EL +
Sbjct: 2 KEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 117 HPNVVSLKHC---------FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLI- 166
VV LK E+ + ++ L+LE PE V + +++R L
Sbjct: 61 M-EVVLLKKVSSGFSGVIRLLDWFERPDSFV-LILER-PEPVQDLFDF---ITERGALQE 114
Query: 167 -YVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI 225
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K
Sbjct: 115 ELARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYT 172
Query: 226 SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKVL 284
+ +R Y PE I + + +WS G +L +++ G P E + V + +
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV 232
Query: 285 GTPTREEIK-CMNPNYTEF-KFPQIKAHPW 312
+ + I+ C+ ++ F +I+ HPW
Sbjct: 233 SSECQHLIRWCLALRPSDRPTFEEIQNHPW 262
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 124/270 (45%), Gaps = 23/270 (8%)
Query: 57 KNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLD 116
K +P ++ Y ++G G FG V+ + VAIK V +D+ EL +
Sbjct: 2 KEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 117 HPNVVSLKHC---------FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLI- 166
VV LK E+ + ++ L+LE PE V + +++R L
Sbjct: 61 M-EVVLLKKVSSGFSGVIRLLDWFERPDSFV-LILER-PEPVQDLFDF---ITERGALQE 114
Query: 167 -YVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI 225
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K
Sbjct: 115 ELARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYT 172
Query: 226 SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKVL 284
+ +R Y PE I + + +WS G +L +++ G P E + V + +
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV 232
Query: 285 GTPTREEIK-CMNPNYTEF-KFPQIKAHPW 312
+ + I+ C+ ++ F +I+ HPW
Sbjct: 233 SSECQHLIRWCLALRPSDRPTFEEIQNHPW 262
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 130/294 (44%), Gaps = 58/294 (19%)
Query: 72 VVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN---------RELQTMRLLDHPNVVS 122
V+G G+F VV + ETG+ A+K V K + RE +L HP++V
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 123 LKHCFFSTTEKDELYLNLVLEYV--PETVHRVIKHH---YKMSQRMPLIYVKLYFYQICR 177
L + S L +V E++ + ++K + S+ + Y++ QI
Sbjct: 91 LLETYSSDG-----MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR----QILE 141
Query: 178 ALAYIHNTIGVCHRDIKPQNLLV--NPHTHQLKLCDFGSAKVLVKGEPNI---SYICSRY 232
AL Y H+ + HRD+KP+N+L+ ++ +KL DFG A L GE + + + +
Sbjct: 142 ALRYCHDN-NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQL--GESGLVAGGRVGTPH 198
Query: 233 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 292
+ APE++ Y +D+W G +L LL G F G ++L E I + +
Sbjct: 199 FMAPEVV-KREPYGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFEGI------IKGKY 249
Query: 293 KCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
K MNP W I + A DLV R+L P R T ++A+
Sbjct: 250 K-MNPR------------QWSHISES-----AKDLVRRMLMLDPAERITVYEAL 285
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 101/207 (48%), Gaps = 25/207 (12%)
Query: 71 RVVGHGSFGVV----FQAKCLETGEAVAIKKVLQDKRYKN-----RELQTMRLLDHPNVV 121
R +G G FG V + + TGE VA+K + + + +E++ +R L H N+V
Sbjct: 15 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 74
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPETVHR--VIKHHYKMSQRMPLIYVKLYFYQICRAL 179
K TE + L++E++P + + K+ K++ + L Y QIC+ +
Sbjct: 75 KYKGI---CTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYA----VQICKGM 127
Query: 180 AYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR----YYRA 235
Y+ + V HRD+ +N+LV HQ+K+ DFG K + + + R ++ A
Sbjct: 128 DYLGSRQYV-HRDLAARNVLVESE-HQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA 185
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELL 262
PE + + Y A+ D+WS G L ELL
Sbjct: 186 PECLMQSKFYIAS-DVWSFGVTLHELL 211
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 119/260 (45%), Gaps = 22/260 (8%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHC 126
Y ++G G FG V+ + VAIK V +D+ EL + VV LK
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM-EVVLLKKV 64
Query: 127 ---------FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLI--YVKLYFYQI 175
E+ + ++ L+LE PE V + +++R L + +F+Q+
Sbjct: 65 SSGFSGVIRLLDWFERPDSFV-LILER-PEPVQDLFDF---ITERGALQEELARSFFWQV 119
Query: 176 CRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRA 235
A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K + +R Y
Sbjct: 120 LEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYSP 177
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTREEIK- 293
PE I + + +WS G +L +++ G P E + V + + + + I+
Sbjct: 178 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRW 237
Query: 294 CMNPNYTEF-KFPQIKAHPW 312
C+ ++ F +I+ HPW
Sbjct: 238 CLALRPSDRPTFEEIQNHPW 257
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 103/218 (47%), Gaps = 19/218 (8%)
Query: 72 VVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQ-------TMRLLDHPNVVSLK 124
V+G GSFG V ++ T E A+K + +D ++ +++ + L P ++
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 407
Query: 125 HCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN 184
H F T D LY V+EYV + +H + R + Y +I L ++ +
Sbjct: 408 HSCFQTM--DRLYF--VMEYVNGGD---LMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQS 460
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYIC-SRYYRAPELIFGAT 243
G+ +RD+K N++++ H +K+ DFG K + C + Y APE+I
Sbjct: 461 K-GIIYRDLKLDNVMLDSEGH-IKIADFGMCKENIWDGVTTKXFCGTPDYIAPEII-AYQ 517
Query: 244 EYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 281
Y ++D W+ G +L E+L GQ F GE D+L + I
Sbjct: 518 PYGKSVDWWAFGVLLYEMLAGQAPFEGED-EDELFQSI 554
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 119/260 (45%), Gaps = 22/260 (8%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHC 126
Y ++G G FG V+ + VAIK V +D+ EL + VV LK
Sbjct: 9 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM-EVVLLKKV 67
Query: 127 ---------FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLI--YVKLYFYQI 175
E+ + ++ L+LE PE V + +++R L + +F+Q+
Sbjct: 68 SSGFSGVIRLLDWFERPDSFV-LILER-PEPVQDLFDF---ITERGALQEELARSFFWQV 122
Query: 176 CRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRA 235
A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K + +R Y
Sbjct: 123 LEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYSP 180
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTREEIK- 293
PE I + + +WS G +L +++ G P E + V + + + + I+
Sbjct: 181 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRW 240
Query: 294 CMNPNYTEF-KFPQIKAHPW 312
C+ ++ F +I+ HPW
Sbjct: 241 CLALRPSDRPTFEEIQNHPW 260
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 113/277 (40%), Gaps = 48/277 (17%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLL-------DHPNVVSL 123
+V+G G+F V K +TG+ A+K + + K E+ R D + L
Sbjct: 67 KVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQL 126
Query: 124 KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
F +DE YL LV+EY ++ K +R+P + Y +I A+ +H
Sbjct: 127 HFAF-----QDENYLYLVMEYY--VGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH 179
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSA-KVLVKGE-PNISYICSRYYRAPELIFG 241
+G HRDIKP N+L++ H ++L DFGS K+ G ++ + + Y +PE++
Sbjct: 180 R-LGYVHRDIKPDNILLDRCGH-IRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQA 237
Query: 242 ATEYTAAI------DIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM 295
D W+ G E+ GQ F +S + +I+
Sbjct: 238 VGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIV-------------- 283
Query: 296 NPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLL 332
K H + + +P EA D + RLL
Sbjct: 284 ----------HYKEHLSLPLVDEGVPEEARDFIQRLL 310
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 119/260 (45%), Gaps = 22/260 (8%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHC 126
Y ++G G FG V+ + VAIK V +D+ EL + VV LK
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM-EVVLLKKV 64
Query: 127 ---------FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLI--YVKLYFYQI 175
E+ + ++ L+LE PE V + +++R L + +F+Q+
Sbjct: 65 SSGFSGVIRLLDWFERPDSFV-LILER-PEPVQDLFDF---ITERGALQEELARSFFWQV 119
Query: 176 CRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRA 235
A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K + +R Y
Sbjct: 120 LEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYSP 177
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTREEIK- 293
PE I + + +WS G +L +++ G P E + V + + + + I+
Sbjct: 178 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRW 237
Query: 294 CMNPNYTEF-KFPQIKAHPW 312
C+ ++ F +I+ HPW
Sbjct: 238 CLALRPSDRPTFEEIQNHPW 257
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 123/270 (45%), Gaps = 23/270 (8%)
Query: 57 KNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLD 116
K +P ++ Y ++G G FG V+ + VAIK V +D+ EL +
Sbjct: 24 KEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 82
Query: 117 HPNVVSLKHC---------FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLI- 166
VV LK E+ + ++ L+LE PE V + +++R L
Sbjct: 83 M-EVVLLKKVSSGFSGVIRLLDWFERPDSFV-LILER-PEPVQDLFDF---ITERGALQE 136
Query: 167 -YVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI 225
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K
Sbjct: 137 ELARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYT 194
Query: 226 SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKVL 284
+ +R Y PE I + + +WS G +L +++ G P E + V + +
Sbjct: 195 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV 254
Query: 285 GTPTREEIK-CMNPNYTEF-KFPQIKAHPW 312
+ I+ C+ ++ F +I+ HPW
Sbjct: 255 SXECQHLIRWCLALRPSDRPTFEEIQNHPW 284
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 116/261 (44%), Gaps = 32/261 (12%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRE-----LQTMRLLDHPNVVSLKHCF 127
+G G+FG V++A+ ET +A KV+ K + E + + DHPN+V L F
Sbjct: 45 LGDGAFGKVYKAQNKETS-VLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 128 FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIG 187
+ E L +++E+ + ++ + + +++ Q AL Y+H+
Sbjct: 104 YY-----ENNLWILIEFCAGGAVDAV--MLELERPLTESQIQVVCKQTLDALNYLHDN-K 155
Query: 188 VCHRDIKPQNLLVNPHTHQLKLCDFG-SAKVLVKGEPNISYICSRYYRAPELIFGATE-- 244
+ HRD+K N+L +KL DFG SAK + S+I + Y+ APE++ T
Sbjct: 156 IIHRDLKAGNILFTLDG-DIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKD 214
Query: 245 --YTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIK----VLGTPTREEI------ 292
Y D+WS G L E+ +P + + L++I K L P+R
Sbjct: 215 RPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFL 274
Query: 293 -KCMNPNY-TEFKFPQIKAHP 311
KC+ N + Q+ HP
Sbjct: 275 KKCLEKNVDARWTTSQLLQHP 295
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 20/204 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRE-----LQTMRLLDHPNVVSLKHCF 127
+G G+FG V++A+ ET +A KV+ K + E + + DHPN+V L F
Sbjct: 45 LGDGAFGKVYKAQNKETS-VLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 128 FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIG 187
+ E L +++E+ + ++ + + +++ Q AL Y+H+
Sbjct: 104 YY-----ENNLWILIEFCAGGAVDAV--MLELERPLTESQIQVVCKQTLDALNYLHDN-K 155
Query: 188 VCHRDIKPQNLLVNPHTHQLKLCDFG-SAKVLVKGEPNISYICSRYYRAPELIFGATE-- 244
+ HRD+K N+L +KL DFG SAK + S+I + Y+ APE++ T
Sbjct: 156 IIHRDLKAGNILFTLDG-DIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKD 214
Query: 245 --YTAAIDIWSAGCVLAELLLGQP 266
Y D+WS G L E+ +P
Sbjct: 215 RPYDYKADVWSLGITLIEMAEIEP 238
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 97/216 (44%), Gaps = 37/216 (17%)
Query: 164 PLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQL---------------- 207
P+ V+ +Q+C+A+ ++H+ + H D+KP+N+L ++L
Sbjct: 135 PIHQVRHMAFQLCQAVKFLHDN-KLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKST 193
Query: 208 --KLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ 265
++ DFGSA E + + + +R+YRAPE+I ++ D+WS GC++ E +G
Sbjct: 194 AVRVVDFGSATF--DHEHHSTIVSTRHYRAPEVILELG-WSQPCDVWSIGCIIFEYYVGF 250
Query: 266 PLFPGESGVDQLVEIIKVLG-TPTREEIKC------------MNPNYTEFKFPQIKAHPW 312
LF + L + ++LG P+R K + N + ++ + P
Sbjct: 251 TLFQTHDNREHLAMMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPL 310
Query: 313 HKIFQKRMPP--EAVDLVSRLLQYSPNLRSTAFDAV 346
+ + DL+ +L+Y P R T +A+
Sbjct: 311 RRYLTSEAEEHHQLFDLIESMLEYEPAKRLTLGEAL 346
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVL------QDKRYKNRELQTM-RLLDHPNVVSLKH 125
+GHGS+G VF+ + E G A+K+ + +D+ K E+ + ++ HP V L+
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQ 124
Query: 126 CFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNT 185
+ E LYL L + +H +P V Y ALA++H+
Sbjct: 125 AW---EEGGILYLQTEL-----CGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ 176
Query: 186 IGVCHRDIKPQNLLVNPHTHQLKLCDFG--------SAKVLVKGEPNISYICSRYYRAPE 237
G+ H D+KP N+ + P + KL DFG A + +G+P Y APE
Sbjct: 177 -GLVHLDVKPANIFLGPRG-RCKLGDFGLLVELGTAGAGEVQEGDPR--------YMAPE 226
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQL 277
L+ G+ Y A D++S G + E+ L G G QL
Sbjct: 227 LLQGS--YGTAADVFSLGLTILEVACNMELPHGGEGWQQL 264
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 102/211 (48%), Gaps = 35/211 (16%)
Query: 71 RVVGHGSFGVVFQAKCLE-----TGEAVAIKKVL-----QDKRYKNRELQTMRLLDHPNV 120
R +G G FG V C + TGE VA+K + Q + RE++ +R L H ++
Sbjct: 15 RDLGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 73
Query: 121 VSLKHCFFSTTEKDELYLNLVLEYVPETVHR--VIKHHYKMSQRMPLIYVKLYFYQICRA 178
V K C EK + LV+EYVP R + +H ++Q + L+ QIC
Sbjct: 74 VKYKGCCEDQGEKS---VQLVMEYVPLGSLRDYLPRHCVGLAQLL------LFAQQICEG 124
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR------- 231
+AY+H + HR + +N+L++ + +K+ DFG AK + +G Y R
Sbjct: 125 MAYLHAQHYI-HRALAARNVLLD-NDRLVKIGDFGLAKAVPEGH---EYYRVREDGDSPV 179
Query: 232 YYRAPELIFGATEYTAAIDIWSAGCVLAELL 262
++ APE + Y A+ D+WS G L ELL
Sbjct: 180 FWYAPECLKECKFYYAS-DVWSFGVTLYELL 209
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 102/211 (48%), Gaps = 35/211 (16%)
Query: 71 RVVGHGSFGVVFQAKCLE-----TGEAVAIKKVL-----QDKRYKNRELQTMRLLDHPNV 120
R +G G FG V C + TGE VA+K + Q + RE++ +R L H ++
Sbjct: 14 RDLGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 72
Query: 121 VSLKHCFFSTTEKDELYLNLVLEYVPETVHR--VIKHHYKMSQRMPLIYVKLYFYQICRA 178
V K C EK + LV+EYVP R + +H ++Q + L+ QIC
Sbjct: 73 VKYKGCCEDQGEKS---VQLVMEYVPLGSLRDYLPRHCVGLAQLL------LFAQQICEG 123
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR------- 231
+AY+H + HR + +N+L++ + +K+ DFG AK + +G Y R
Sbjct: 124 MAYLHAQHYI-HRALAARNVLLD-NDRLVKIGDFGLAKAVPEGH---EYYRVREDGDSPV 178
Query: 232 YYRAPELIFGATEYTAAIDIWSAGCVLAELL 262
++ APE + Y A+ D+WS G L ELL
Sbjct: 179 FWYAPECLKECKFYYAS-DVWSFGVTLYELL 208
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 118/260 (45%), Gaps = 22/260 (8%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHC 126
Y ++G G FG V+ + VAIK V +D+ EL + VV LK
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM-EVVLLKKV 64
Query: 127 ---------FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLI--YVKLYFYQI 175
E+ + ++ L+LE PE V + +++R L + +F+Q+
Sbjct: 65 SSGFSGVIRLLDWFERPDSFV-LILER-PEPVQDLFDF---ITERGALQEELARSFFWQV 119
Query: 176 CRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRA 235
A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K + +R Y
Sbjct: 120 LEAVRHCHNX-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYSP 177
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTREEIK- 293
PE I + + +WS G +L +++ G P E + V + + + I+
Sbjct: 178 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRW 237
Query: 294 CMNPNYTEF-KFPQIKAHPW 312
C+ ++ F +I+ HPW
Sbjct: 238 CLALRPSDRPTFEEIQNHPW 257
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 19/199 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTE 132
VG GSFG V + K +TG A+KKV + + ++ EL L P +V L
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKV-RLEVFRVEELVACAGLSSPRIVPLYGAV----- 135
Query: 133 KDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHR 191
++ ++N+ +E + ++ ++IK + + L Y+ Q L Y+H T + H
Sbjct: 136 REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLG----QALEGLEYLH-TRRILHG 190
Query: 192 DIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY------YRAPELIFGATEY 245
D+K N+L++ + LCDFG A L S + Y + APE++ G
Sbjct: 191 DVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP-C 249
Query: 246 TAAIDIWSAGCVLAELLLG 264
A +DIWS+ C++ +L G
Sbjct: 250 DAKVDIWSSCCMMLHMLNG 268
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 19/199 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTE 132
VG GSFG V + K +TG A+KKV + + ++ EL L P +V L
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKV-RLEVFRVEELVACAGLSSPRIVPLYGAV----- 119
Query: 133 KDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHR 191
++ ++N+ +E + ++ ++IK + + L Y+ Q L Y+H T + H
Sbjct: 120 REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLG----QALEGLEYLH-TRRILHG 174
Query: 192 DIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY------YRAPELIFGATEY 245
D+K N+L++ + LCDFG A L S + Y + APE++ G
Sbjct: 175 DVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP-C 233
Query: 246 TAAIDIWSAGCVLAELLLG 264
A +DIWS+ C++ +L G
Sbjct: 234 DAKVDIWSSCCMMLHMLNG 252
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 122/270 (45%), Gaps = 23/270 (8%)
Query: 57 KNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLD 116
K +P ++ Y ++G G FG V+ + VAIK V +D+ EL +
Sbjct: 1 KEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 59
Query: 117 HPNVVSLKHC---------FFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPL 165
VV LK E+ + ++ L+LE + + + I + + +
Sbjct: 60 M-EVVLLKKVSSGFSGVIRLLDWFERPDSFV-LILERMEPVQDLFDFITERGALQEEL-- 115
Query: 166 IYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI 225
+ +F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K
Sbjct: 116 --ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYT 171
Query: 226 SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKVL 284
+ +R Y PE I + + +WS G +L +++ G P E + V + +
Sbjct: 172 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV 231
Query: 285 GTPTREEIK-CMNPNYTEF-KFPQIKAHPW 312
+ + I+ C+ ++ F +I+ HPW
Sbjct: 232 SSECQHLIRWCLALRPSDRPTFEEIQNHPW 261
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 110/240 (45%), Gaps = 35/240 (14%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKH 125
+++ R +G G+FG V + ++ + A+K V K+Y +L + +
Sbjct: 36 AFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINN 95
Query: 126 CFFSTTEKDELYLN---LVLEYVPETVHRVI-KHHYKMSQRMPLIYVKLYFYQICRALAY 181
+Y + L+ E + +++ +I +++Y + +KLY +I +AL Y
Sbjct: 96 NNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNY---NGFHIEDIKLYCIEILKALNY 152
Query: 182 IHNTIGVCHRDIKPQNLLVN-PHTHQ-----------------------LKLCDFGSAKV 217
+ + + H D+KP+N+L++ P+ + +KL DFG A
Sbjct: 153 LRK-MSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATF 211
Query: 218 LVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQL 277
K + + S I +R YRAPE+I + + D+WS GCVLAEL G LF ++ L
Sbjct: 212 --KSDYHGSIINTRQYRAPEVILNLG-WDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHL 268
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 97/224 (43%), Gaps = 17/224 (7%)
Query: 61 PKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKV------LQDKRYKNRELQTMRL 114
P + Y +G GS+G + + G+ + K++ +K+ E+ +R
Sbjct: 2 PSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRE 61
Query: 115 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFY 173
L HPN+V + ++ L +V+EY + VI K Q + +V
Sbjct: 62 LKHPNIVRY---YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 118
Query: 174 QICRALAYIHNTIG----VCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEP-NISYI 228
Q+ AL H V HRD+KP N+ ++ +KL DFG A++L E ++
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDG-KQNVKLGDFGLARILNHDEDFAKEFV 177
Query: 229 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGES 272
+ YY +PE + Y DIWS GC+L EL P F S
Sbjct: 178 GTPYYMSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPFTAFS 220
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 18/200 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKV-----LQDKRYKNRELQTMRLLDHPNVVSLKHCF 127
+G GSFG VF+ T + VAIK + + +E+ + D P V +
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 94
Query: 128 FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIG 187
T+ L +++EY+ + + + + +I + L Y+H+
Sbjct: 95 LKDTK-----LWIIMEYLGGGSALDLLEPGPLDETQ----IATILREILKGLDYLHSEKK 145
Query: 188 VCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGE-PNISYICSRYYRAPELIFGATEYT 246
+ HRDIK N+L++ H ++KL DFG A L + +++ + ++ APE+I + Y
Sbjct: 146 I-HRDIKAANVLLSEHG-EVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI-KQSAYD 202
Query: 247 AAIDIWSAGCVLAELLLGQP 266
+ DIWS G EL G+P
Sbjct: 203 SKADIWSLGITAIELARGEP 222
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 115/261 (44%), Gaps = 32/261 (12%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRE-----LQTMRLLDHPNVVSLKHCF 127
+G G+FG V++A+ ET +A KV+ K + E + + DHPN+V L F
Sbjct: 45 LGDGAFGKVYKAQNKETS-VLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 128 FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIG 187
+ E L +++E+ + ++ + + +++ Q AL Y+H+
Sbjct: 104 YY-----ENNLWILIEFCAGGAVDAV--MLELERPLTESQIQVVCKQTLDALNYLHDN-K 155
Query: 188 VCHRDIKPQNLLVNPHTHQLKLCDFG-SAKVLVKGEPNISYICSRYYRAPELIFGATE-- 244
+ HRD+K N+L +KL DFG SAK + +I + Y+ APE++ T
Sbjct: 156 IIHRDLKAGNILFTLDG-DIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKD 214
Query: 245 --YTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIK----VLGTPTREEI------ 292
Y D+WS G L E+ +P + + L++I K L P+R
Sbjct: 215 RPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFL 274
Query: 293 -KCMNPNY-TEFKFPQIKAHP 311
KC+ N + Q+ HP
Sbjct: 275 KKCLEKNVDARWTTSQLLQHP 295
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 19/199 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTE 132
+G GSFG V + K +TG A+KKV + + ++ EL L P +V L
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKV-RLEVFRVEELVACAGLSSPRIVPLYGAV----- 133
Query: 133 KDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHR 191
++ ++N+ +E + ++ ++IK + + L Y+ Q L Y+H T + H
Sbjct: 134 REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLG----QALEGLEYLH-TRRILHG 188
Query: 192 DIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY------YRAPELIFGATEY 245
D+K N+L++ + LCDFG A L S + Y + APE++ G
Sbjct: 189 DVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP-C 247
Query: 246 TAAIDIWSAGCVLAELLLG 264
A +DIWS+ C++ +L G
Sbjct: 248 DAKVDIWSSCCMMLHMLNG 266
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 130/290 (44%), Gaps = 45/290 (15%)
Query: 65 ISYMAERVVGHGSFGVVFQAKCLE-TGEAVAIKKVLQDKRYKNRELQTMR-LLDHPNVVS 122
+S + R V H + G F K +E T E ++ +++ + + RE +R + HP++++
Sbjct: 106 VSSVVRRCV-HRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIIT 164
Query: 123 LKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAY 181
L + S++ ++ LV + + + + + +S++ + + A+++
Sbjct: 165 LIDSYESSS-----FMFLVFDLMRKGELFDYLTEKVALSEK----ETRSIMRSLLEAVSF 215
Query: 182 IHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 241
+H + HRD+KP+N+L++ + Q++L DFG + L GE + Y APE++
Sbjct: 216 LHAN-NIVHRDLKPENILLDDNM-QIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKC 273
Query: 242 ATE-----YTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 296
+ + Y +D+W+ G +L LL G P F + L I M
Sbjct: 274 SMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMI--------------ME 319
Query: 297 PNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
Y +F P+ W DL+SRLLQ P R TA A+
Sbjct: 320 GQY-QFSSPE-----WDD-----RSSTVKDLISRLLQVDPEARLTAEQAL 358
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 100/225 (44%), Gaps = 33/225 (14%)
Query: 107 RELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLI 166
+E+ ++ LDHPNVV L E D LY+ V E V + + +S+
Sbjct: 85 QEIAILKKLDHPNVVKLVEVLDDPNE-DHLYM--VFELVNQGPVMEVPTLKPLSEDQ--- 138
Query: 167 YVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNIS 226
+ YF + + + Y+H + HRDIKP NLLV H +K+ DFG + + +S
Sbjct: 139 -ARFYFQDLIKGIEYLHYQ-KIIHRDIKPSNLLVGEDGH-IKIADFGVSNEFKGSDALLS 195
Query: 227 -YICSRYYRAPELIFGATEYTA--AIDIWSAGCVLAELLLGQPLFPGESGV--------- 274
+ + + APE + + + A+D+W+ G L + GQ F E +
Sbjct: 196 NTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQ 255
Query: 275 -----DQ--LVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPW 312
DQ + E +K L T ++ NP + P+IK HPW
Sbjct: 256 ALEFPDQPDIAEDLKDLITRMLDK----NPE-SRIVVPEIKLHPW 295
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 38/220 (17%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNREL---------QTMRLLDHPNVVSL 123
+G G FGVVF+AK AIK++ R NREL + + L+HP +V
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRI----RLPNRELAREKVMREVKALAKLEHPGIVRY 68
Query: 124 KHCFF--STTEK-----DELYLNLVLEYV-PETVHRVIKHHYKMSQRMPLIYVKLYFYQI 175
+ + +TTEK ++YL + ++ E + + + +R + + + F QI
Sbjct: 69 FNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHI-FLQI 127
Query: 176 CRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGE-------PNISY- 227
A+ ++H+ G+ HRD+KP N+ +K+ DFG + + E P +Y
Sbjct: 128 AEAVEFLHSK-GLMHRDLKPSNIFFT-MDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 185
Query: 228 -----ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELL 262
+ ++ Y +PE I G + Y+ +DI+S G +L ELL
Sbjct: 186 RHTGQVGTKLYMSPEQIHGNS-YSHKVDIFSLGLILFELL 224
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 22/202 (10%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKV-----LQDKRYKNRELQTMRLLDHPNVVSLKHCF 127
+G GSFG VF+ T + VAIK + + +E+ + D P V +
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 128 FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPL--IYVKLYFYQICRALAYIHNT 185
T+ L +++EY+ + + PL + +I + L Y+H+
Sbjct: 75 LKDTK-----LWIIMEYLGGG------SALDLLEPGPLDETQIATILREILKGLDYLHSE 123
Query: 186 IGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGE-PNISYICSRYYRAPELIFGATE 244
+ HRDIK N+L++ H ++KL DFG A L + +++ + ++ APE+I +
Sbjct: 124 KKI-HRDIKAANVLLSEHG-EVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI-KQSA 180
Query: 245 YTAAIDIWSAGCVLAELLLGQP 266
Y + DIWS G EL G+P
Sbjct: 181 YDSKADIWSLGITAIELARGEP 202
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 136/340 (40%), Gaps = 84/340 (24%)
Query: 20 PEEMNDMKIRDDKEMEATVVDGNGTEAGHIIVTTIGGK-NGQPKQTISYMAERVVGHGSF 78
PE+ ++ DD E E D N G + IG NG+ Y R +G G F
Sbjct: 1 PEQEEEILGSDDDEQE----DPNDYCKGGYHLVKIGDLFNGR------YHVIRKLGWGHF 50
Query: 79 GVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLL--------DHPN---VVSLKHCF 127
V+ + ++ + VA+K V + Y L +RLL + PN VV L F
Sbjct: 51 STVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDF 110
Query: 128 FSTTEKDELYLNLVLEYVPETVHR-VIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTI 186
+ + ++ +V E + + + +IK +Y Q +PL VK Q+ + L Y+H
Sbjct: 111 -KISGVNGTHICMVFEVLGHHLLKWIIKSNY---QGLPLPCVKKIIQQVLQGLDYLHTKC 166
Query: 187 GVCHRDIKPQNL------------------------------------------LVNP-- 202
+ H DIKP+N+ LVNP
Sbjct: 167 RIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLE 226
Query: 203 ----HTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVL 258
++K+ D G+A + K I +R YR+ E++ G+ Y DIWS C+
Sbjct: 227 PKNAEKLKVKIADLGNACWVHKH--FTEDIQTRQYRSLEVLIGSG-YNTPADIWSTACMA 283
Query: 259 AELLLGQPLFPGESG------VDQLVEIIKVLGTPTREEI 292
EL G LF SG D + II++LG R+ I
Sbjct: 284 FELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLI 323
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 106/210 (50%), Gaps = 23/210 (10%)
Query: 72 VVGHGSFGVVFQAKCLETGEAVAIK--KVLQDKRYKNRELQTM--RLLDHPNVVSLKHCF 127
+VG+G++G V++ + ++TG+ AIK V D+ + ++ M + H N+ + F
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAF 90
Query: 128 FSTTE---KDELYLNLVLEYV-PETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
D+L+ LV+E+ +V +IK+ + ++ +I R L+++H
Sbjct: 91 IKKNPPGMDDQLW--LVMEFCGAGSVTDLIKN--TKGNTLKEEWIAYICREILRGLSHLH 146
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVK--GEPNISYICSRYYRAPELIF- 240
V HRDIK QN+L+ + ++KL DFG + L + G N ++I + Y+ APE+I
Sbjct: 147 QH-KVIHRDIKGQNVLLTENA-EVKLVDFGVSAQLDRTVGRRN-TFIGTPYWMAPEVIAC 203
Query: 241 ----GATEYTAAIDIWSAGCVLAELLLGQP 266
AT Y D+WS G E+ G P
Sbjct: 204 DENPDAT-YDFKSDLWSLGITAIEMAEGAP 232
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 22/202 (10%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKV-----LQDKRYKNRELQTMRLLDHPNVVSLKHCF 127
+G GSFG VF+ T + VAIK + + +E+ + D P V +
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 89
Query: 128 FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPL--IYVKLYFYQICRALAYIHNT 185
T+ L +++EY+ + + PL + +I + L Y+H+
Sbjct: 90 LKDTK-----LWIIMEYLGGG------SALDLLEPGPLDETQIATILREILKGLDYLHSE 138
Query: 186 IGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGE-PNISYICSRYYRAPELIFGATE 244
+ HRDIK N+L++ H ++KL DFG A L + ++ + ++ APE+I +
Sbjct: 139 KKI-HRDIKAANVLLSEHG-EVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI-KQSA 195
Query: 245 YTAAIDIWSAGCVLAELLLGQP 266
Y + DIWS G EL G+P
Sbjct: 196 YDSKADIWSLGITAIELARGEP 217
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 84/165 (50%), Gaps = 16/165 (9%)
Query: 171 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 230
Y +Q+ R + ++ + + HRD+ +N+L++ + +K+CDFG A+ + K + +
Sbjct: 204 YSFQVARGMEFLSSRKCI-HRDLAARNILLS-ENNVVKICDFGLARDIYKNPDYVRKGDT 261
Query: 231 RY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLVEIIKVLGT 286
R + APE IF Y+ D+WS G +L E+ LG +PG V++ + +
Sbjct: 262 RLPLKWMAPESIFDKI-YSTKSDVWSYGVLLWEIFSLGGSPYPG-------VQMDEDFCS 313
Query: 287 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL 331
RE ++ P Y+ + QI WH+ ++R P +LV +L
Sbjct: 314 RLREGMRMRAPEYSTPEIYQIMLDCWHRDPKER--PRFAELVEKL 356
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 103/225 (45%), Gaps = 22/225 (9%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLL-------DHPNVVSL 123
+V+G G+FG V K + A+K + + + K E R D + +L
Sbjct: 80 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTL 139
Query: 124 KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
+ F +D+ L LV++Y ++ K R+P + Y ++ A+ +H
Sbjct: 140 HYAF-----QDDNNLYLVMDYY--VGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH 192
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSA-KVLVKGEPNISY-ICSRYYRAPELI-- 239
+ HRDIKP N+L++ + H ++L DFGS K++ G S + + Y +PE++
Sbjct: 193 Q-LHYVHRDIKPDNILMDMNGH-IRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQA 250
Query: 240 --FGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIK 282
G Y D WS G + E+L G+ F ES V+ +I+
Sbjct: 251 MEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 295
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 175 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISYICSRY 232
I A+ Y+H +I + HRD+KP+NLL LKL DFG AK + + Y
Sbjct: 170 IGEAIQYLH-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 228
Query: 233 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGV 274
Y APE + G +Y + D+WS G ++ LL G P F G+
Sbjct: 229 YVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 269
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 175 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISYICSRY 232
I A+ Y+H +I + HRD+KP+NLL LKL DFG AK + + Y
Sbjct: 176 IGEAIQYLH-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 234
Query: 233 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGV 274
Y APE + G +Y + D+WS G ++ LL G P F G+
Sbjct: 235 YVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 275
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 175 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISYICSRY 232
I A+ Y+H +I + HRD+KP+NLL LKL DFG AK + + Y
Sbjct: 131 IGEAIQYLH-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 189
Query: 233 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGV 274
Y APE + G +Y + D+WS G ++ LL G P F G+
Sbjct: 190 YVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 230
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 175 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISYICSRY 232
I A+ Y+H +I + HRD+KP+NLL LKL DFG AK + + Y
Sbjct: 126 IGEAIQYLH-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 184
Query: 233 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGV 274
Y APE + G +Y + D+WS G ++ LL G P F G+
Sbjct: 185 YVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 225
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 175 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISYICSRY 232
I A+ Y+H +I + HRD+KP+NLL LKL DFG AK + + Y
Sbjct: 126 IGEAIQYLH-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 184
Query: 233 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGV 274
Y APE + G +Y + D+WS G ++ LL G P F G+
Sbjct: 185 YVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 225
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 22/202 (10%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKV-----LQDKRYKNRELQTMRLLDHPNVVSLKHCF 127
+G GSFG VF+ T + VAIK + + +E+ + D P V +
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 128 FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPL--IYVKLYFYQICRALAYIHNT 185
T+ L +++EY+ + + PL + +I + L Y+H+
Sbjct: 75 LKDTK-----LWIIMEYLGGG------SALDLLEPGPLDETQIATILREILKGLDYLHSE 123
Query: 186 IGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGE-PNISYICSRYYRAPELIFGATE 244
+ HRDIK N+L++ H ++KL DFG A L + ++ + ++ APE+I +
Sbjct: 124 KKI-HRDIKAANVLLSEHG-EVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI-KQSA 180
Query: 245 YTAAIDIWSAGCVLAELLLGQP 266
Y + DIWS G EL G+P
Sbjct: 181 YDSKADIWSLGITAIELARGEP 202
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 175 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISYICSRY 232
I A+ Y+H +I + HRD+KP+NLL LKL DFG AK + + Y
Sbjct: 130 IGEAIQYLH-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 188
Query: 233 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGV 274
Y APE + G +Y + D+WS G ++ LL G P F G+
Sbjct: 189 YVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 229
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 175 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISYICSRY 232
I A+ Y+H +I + HRD+KP+NLL LKL DFG AK + + Y
Sbjct: 132 IGEAIQYLH-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 190
Query: 233 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGV 274
Y APE + G +Y + D+WS G ++ LL G P F G+
Sbjct: 191 YVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 231
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 16/222 (7%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFST 130
+V+G G+FG V K T A+K + + + K E R + +V+ C + T
Sbjct: 96 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFR--EERDVLVNGDCQWIT 153
Query: 131 TE----KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTI 186
+DE +L LV++Y ++ K ++P + Y ++ A+ IH +
Sbjct: 154 ALHYAFQDENHLYLVMDYY--VGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQ-L 210
Query: 187 GVCHRDIKPQNLLVNPHTHQLKLCDFGSA-KVLVKGEPNISY-ICSRYYRAPELI----F 240
HRDIKP N+L++ + H ++L DFGS K+ G S + + Y +PE++
Sbjct: 211 HYVHRDIKPDNVLLDVNGH-IRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMED 269
Query: 241 GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIK 282
G +Y D WS G + E+L G+ F ES V+ +I+
Sbjct: 270 GMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 311
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 95/199 (47%), Gaps = 19/199 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTE 132
+G GSFG V + + +TG A+KKV + + ++ EL L P +V L
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKV-RLEVFRAEELMACAGLTSPRIVPLYGAV----- 154
Query: 133 KDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHR 191
++ ++N+ +E + ++ +++K + + L Y+ Q L Y+H+ + H
Sbjct: 155 REGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLG----QALEGLEYLHSRR-ILHG 209
Query: 192 DIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY------YRAPELIFGATEY 245
D+K N+L++ LCDFG A L S + Y + APE++ G +
Sbjct: 210 DVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRS-C 268
Query: 246 TAAIDIWSAGCVLAELLLG 264
A +D+WS+ C++ +L G
Sbjct: 269 DAKVDVWSSCCMMLHMLNG 287
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 175 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISYICSRY 232
I A+ Y+H +I + HRD+KP+NLL LKL DFG AK + + Y
Sbjct: 125 IGEAIQYLH-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 183
Query: 233 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGV 274
Y APE + G +Y + D+WS G ++ LL G P F G+
Sbjct: 184 YVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 224
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 175 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISYICSRY 232
I A+ Y+H +I + HRD+KP+NLL LKL DFG AK + + Y
Sbjct: 124 IGEAIQYLH-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 182
Query: 233 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGV 274
Y APE + G +Y + D+WS G ++ LL G P F G+
Sbjct: 183 YVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 223
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 117/287 (40%), Gaps = 71/287 (24%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLL--------DHP 118
Y R +G G F V+ ++ VA+K V + Y L ++LL P
Sbjct: 33 YHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALDEIKLLKCVRESDPSDP 92
Query: 119 N---VVSLKHCFFSTTEKDELYLNLVLEYVPETVHR-VIKHHYKMSQRMPLIYVKLYFYQ 174
N VV L F + + +++ +V E + + + +IK +Y Q +P+ VK Q
Sbjct: 93 NKDMVVQLID-DFKISGMNGIHVCMVFEVLGHHLLKWIIKSNY---QGLPVRCVKSIIRQ 148
Query: 175 ICRALAYIHNTIGVCHRDIKPQN------------------------------------- 197
+ + L Y+H+ + H DIKP+N
Sbjct: 149 VLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGAPPPSGSAVSTAP 208
Query: 198 ---LLVNP------HTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAA 248
LLVNP ++K+ D G+A + K I +R YR+ E++ GA Y+
Sbjct: 209 AADLLVNPLDPRNADKIRVKIADLGNACWVHKH--FTEDIQTRQYRSIEVLIGAG-YSTP 265
Query: 249 IDIWSAGCVLAELLLGQPLFPGESG------VDQLVEIIKVLGTPTR 289
DIWS C+ EL G LF SG D + II++LG+ R
Sbjct: 266 ADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHIIELLGSIPR 312
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 106/225 (47%), Gaps = 27/225 (12%)
Query: 58 NGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKNRELQTM 112
G+ Q S M+ +G G+FG V+ A E + V +K KVL+D ++ +L +
Sbjct: 19 EGEYSQKYSTMSP--LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKV 76
Query: 113 RL-------LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE--TVHRVIKHHYKMSQRM 163
L ++H N++ + F +++ + LV+E + I H ++ +
Sbjct: 77 TLEIAILSRVEHANIIKVLDIF-----ENQGFFQLVMEKHGSGLDLFAFIDRHPRLDE-- 129
Query: 164 PLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEP 223
PL F Q+ A+ Y+ + HRDIK +N+++ +KL DFGSA L +G+
Sbjct: 130 PL--ASYIFRQLVSAVGYLRLK-DIIHRDIKDENIVI-AEDFTIKLIDFGSAAYLERGKL 185
Query: 224 NISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 268
++ + Y APE++ G +++WS G L L+ + F
Sbjct: 186 FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF 230
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 175 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISYICSRY 232
I A+ Y+H +I + HRD+KP+NLL LKL DFG AK + + Y
Sbjct: 140 IGEAIQYLH-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 198
Query: 233 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGV 274
Y APE + G +Y + D+WS G ++ LL G P F G+
Sbjct: 199 YVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 239
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 95/220 (43%), Gaps = 37/220 (16%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLD---------- 116
Y ++G G FG VF L VAIK + +NR L L D
Sbjct: 33 YRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVI-----PRNRVLGWSPLSDSVTCPLEVAL 87
Query: 117 ---------HPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIY 167
HP V+ L F E E ++ LVLE P + + ++++ PL
Sbjct: 88 LWKVGAGGGHPGVIRLLDWF----ETQEGFM-LVLER-PLPAQDLFDY---ITEKGPLGE 138
Query: 168 --VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI 225
+ +F Q+ A+ + H+ GV HRDIK +N+L++ KL DFGS L+ EP
Sbjct: 139 GPSRCFFGQVVAAIQHCHSR-GVVHRDIKDENILIDLRRGCAKLIDFGSG-ALLHDEPYT 196
Query: 226 SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ 265
+ +R Y PE I + +WS G +L +++ G
Sbjct: 197 DFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGD 236
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 16/222 (7%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFST 130
+V+G G+FG V K T A+K + + + K E R + +V+ C + T
Sbjct: 80 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFR--EERDVLVNGDCQWIT 137
Query: 131 TE----KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTI 186
+DE +L LV++Y ++ K ++P + Y ++ A+ IH +
Sbjct: 138 ALHYAFQDENHLYLVMDYY--VGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQ-L 194
Query: 187 GVCHRDIKPQNLLVNPHTHQLKLCDFGSA-KVLVKGEPNISY-ICSRYYRAPELI----F 240
HRDIKP N+L++ + H ++L DFGS K+ G S + + Y +PE++
Sbjct: 195 HYVHRDIKPDNVLLDVNGH-IRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMED 253
Query: 241 GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIK 282
G +Y D WS G + E+L G+ F ES V+ +I+
Sbjct: 254 GMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 295
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 97/224 (43%), Gaps = 17/224 (7%)
Query: 61 PKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKV------LQDKRYKNRELQTMRL 114
P + Y +G GS+G + + G+ + K++ +K+ E+ +R
Sbjct: 2 PSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRE 61
Query: 115 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFY 173
L HPN+V + ++ L +V+EY + VI K Q + +V
Sbjct: 62 LKHPNIVRY---YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 118
Query: 174 QICRALAYIHNTIG----VCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI-SYI 228
Q+ AL H V HRD+KP N+ ++ +KL DFG A++L +++
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGK-QNVKLGDFGLARILNHDTSFAKTFV 177
Query: 229 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGES 272
+ YY +PE + Y DIWS GC+L EL P F S
Sbjct: 178 GTPYYMSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPFTAFS 220
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 123/271 (45%), Gaps = 39/271 (14%)
Query: 89 TGEAVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVP-E 147
+ ++IK D +KN ELQ + + + ++ C T DE+Y+ + EY+ +
Sbjct: 77 NNDKISIKSKYDD--FKN-ELQIITDIKNEYCLT---CEGIITNYDEVYI--IYEYMEND 128
Query: 148 TVHRVIKHHYKMSQR----MPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPH 203
++ + ++ + + + +P+ +K + + +YIHN +CHRD+KP N+L++ +
Sbjct: 129 SILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKN 188
Query: 204 THQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTAA-IDIWSAGCVLAELL 262
++KL DFG ++ +V + S + + PE + Y A +DIWS G L +
Sbjct: 189 G-RVKLSDFGESEYMVDKKIKGSR-GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMF 246
Query: 263 LGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKR--- 319
F + LVE+ + T E +P + H + + K+
Sbjct: 247 YNVVPFSLKIS---LVELFNNIRTKNIE-------------YPLDRNHFLYPLTNKKSTC 290
Query: 320 ----MPPEAVDLVSRLLQYSPNLRSTAFDAV 346
+ E +D + L+ +P R T+ DA+
Sbjct: 291 SNNFLSNEDIDFLKLFLRKNPAERITSEDAL 321
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 75/145 (51%), Gaps = 5/145 (3%)
Query: 171 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 230
+F+Q+ A+ + HN GV HRDIK +N+L++ + +LKL DFGS L+K + +
Sbjct: 162 FFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGT 219
Query: 231 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTR 289
R Y PE I + + +WS G +L +++ G P E + V + + + +
Sbjct: 220 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQ 279
Query: 290 EEIK-CMNPNYTEF-KFPQIKAHPW 312
I+ C+ ++ F +I+ HPW
Sbjct: 280 HLIRWCLALRPSDRPTFEEIQNHPW 304
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 97/224 (43%), Gaps = 17/224 (7%)
Query: 61 PKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKV------LQDKRYKNRELQTMRL 114
P + Y +G GS+G + + G+ + K++ +K+ E+ +R
Sbjct: 2 PSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRE 61
Query: 115 LDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFY 173
L HPN+V + ++ L +V+EY + VI K Q + +V
Sbjct: 62 LKHPNIVRY---YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 118
Query: 174 QICRALAYIHNTIG----VCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI-SYI 228
Q+ AL H V HRD+KP N+ ++ +KL DFG A++L +++
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGK-QNVKLGDFGLARILNHDTSFAKAFV 177
Query: 229 CSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGES 272
+ YY +PE + Y DIWS GC+L EL P F S
Sbjct: 178 GTPYYMSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPFTAFS 220
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 52/102 (50%), Gaps = 4/102 (3%)
Query: 175 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISYICSRY 232
I A+ Y+H +I + HRD+KP+NLL LKL DFG AK + Y
Sbjct: 124 IGEAIQYLH-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPY 182
Query: 233 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGV 274
Y APE + G +Y + D+WS G ++ LL G P F G+
Sbjct: 183 YVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 223
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 111/249 (44%), Gaps = 44/249 (17%)
Query: 72 VVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQT-------MRLLDHPNVVSLK 124
V+G G+FG V +A+ AIKK+ R+ +L T + L+H VV
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKI----RHTEEKLSTILSEVXLLASLNHQYVVRYY 68
Query: 125 HCFFS--------TTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQIC 176
+ T K + L + EY + H ++Q+ Y +L F QI
Sbjct: 69 AAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDE-YWRL-FRQIL 126
Query: 177 RALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAK-------VLVKGEPNI---- 225
AL+YIH+ G+ HR++KP N+ ++ + +K+ DFG AK +L N+
Sbjct: 127 EALSYIHSQ-GIIHRNLKPXNIFID-ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 226 ----SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 281
S I + Y A E++ G Y ID +S G + E ++P +G ++ V I+
Sbjct: 185 DNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE-----XIYPFSTGXER-VNIL 238
Query: 282 KVLGTPTRE 290
K L + + E
Sbjct: 239 KKLRSVSIE 247
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTE 132
+G GSFG V + + +TG A+KKV + + ++ EL L P +V L
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKV-RLEVFRAEELMACAGLTSPRIVPLYGAV----- 135
Query: 133 KDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHR 191
++ ++N+ +E + ++ +++K + + L Y+ Q L Y+H+ + H
Sbjct: 136 REGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLG----QALEGLEYLHSRR-ILHG 190
Query: 192 DIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY------YRAPELIFGATEY 245
D+K N+L++ LCDFG A L + Y + APE++ G +
Sbjct: 191 DVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRS-C 249
Query: 246 TAAIDIWSAGCVLAELLLG 264
A +D+WS+ C++ +L G
Sbjct: 250 DAKVDVWSSCCMMLHMLNG 268
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 27/206 (13%)
Query: 71 RVVGHGSFGVVFQAKCLET---GEAVAIK--KVLQDKRYKNRELQ---TMRLLDHPNVVS 122
R +G G FG V Q + AVAIK K + + LQ TMR DHP++V
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 455
Query: 123 LKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
L ++ +++ + L + E R K S + L + LY YQ+ ALAY+
Sbjct: 456 L----IGVITENPVWIIMELCTLGEL--RSFLQVRKFS--LDLASLILYAYQLSTALAYL 507
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-----YYRAPE 237
+ V HRDI +N+LV+ T +KL DFG ++ + E + Y S+ + APE
Sbjct: 508 ESKRFV-HRDIAARNVLVSA-TDCVKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPE 562
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLL 263
I +T+A D+W G + E+L+
Sbjct: 563 SI-NFRRFTSASDVWMFGVCMWEILM 587
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 27/206 (13%)
Query: 71 RVVGHGSFGVVFQAKCLET---GEAVAIK--KVLQDKRYKNRELQ---TMRLLDHPNVVS 122
R +G G FG V Q + AVAIK K + + LQ TMR DHP++V
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 123 LKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
L ++ +++ + L + E R K S + L + LY YQ+ ALAY+
Sbjct: 76 L----IGVITENPVWIIMELCTLGEL--RSFLQVRKFS--LDLASLILYAYQLSTALAYL 127
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-----YYRAPE 237
+ V HRDI +N+LV+ T +KL DFG ++ + E + Y S+ + APE
Sbjct: 128 ESKRFV-HRDIAARNVLVSA-TDCVKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPE 182
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLL 263
I +T+A D+W G + E+L+
Sbjct: 183 SI-NFRRFTSASDVWMFGVCMWEILM 207
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 22/202 (10%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKV-----LQDKRYKNRELQTMRLLDHPNVVSLKHCF 127
+G GSFG V++ T E VAIK + + +E+ + D P + +
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 128 FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPL--IYVKLYFYQICRALAYIHNT 185
+T+ L +++EY+ + + PL Y+ +I + L Y+H+
Sbjct: 87 LKSTK-----LWIIMEYLGGG------SALDLLKPGPLEETYIATILREILKGLDYLHSE 135
Query: 186 IGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGE-PNISYICSRYYRAPELIFGATE 244
+ HRDIK N+L++ +KL DFG A L + ++ + ++ APE+I +
Sbjct: 136 RKI-HRDIKAANVLLSEQG-DVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI-KQSA 192
Query: 245 YTAAIDIWSAGCVLAELLLGQP 266
Y DIWS G EL G+P
Sbjct: 193 YDFKADIWSLGITAIELAKGEP 214
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 118/292 (40%), Gaps = 73/292 (25%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLL--------DHP 118
Y R +G G F V+ + ++ + VA+K V + Y L +RLL + P
Sbjct: 23 YHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDP 82
Query: 119 N---VVSLKHCFFSTTEKDELYLNLVLEYVPETVHR-VIKHHYKMSQRMPLIYVKLYFYQ 174
N VV L F + + ++ +V E + + + +IK +Y Q +PL VK Q
Sbjct: 83 NREMVVQLLDDF-KISGVNGTHICMVFEVLGHHLLKWIIKSNY---QGLPLPCVKKIIQQ 138
Query: 175 ICRALAYIHNTIGVCHRDIKPQNL------------------------------------ 198
+ + L Y+H + H DIKP+N+
Sbjct: 139 VLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAP 198
Query: 199 ------LVNP------HTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 246
LVNP ++K+ D G+A + K I +R YR+ E++ G+ Y
Sbjct: 199 ATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH--FTEDIQTRQYRSLEVLIGSG-YN 255
Query: 247 AAIDIWSAGCVLAELLLGQPLFPGESG------VDQLVEIIKVLGTPTREEI 292
DIWS C+ EL G LF SG D + II++LG R+ I
Sbjct: 256 TPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLI 307
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 102/225 (45%), Gaps = 28/225 (12%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKNRELQTMRLLDHPNVV 121
++ ++G G+ VF+ + +TG+ AIK L+ + RE + ++ L+H N+V
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIV 70
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVP----ETVHRVIKHHYKMSQRMPLIYVKLYFYQICR 177
L TT + ++ L++E+ P TV + Y + + LI ++ +
Sbjct: 71 KLFAIEEETTTRHKV---LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLR----DVVG 123
Query: 178 ALAYIHNTIGVCHRDIKPQNLL--VNPHTHQL-KLCDFGSAKVLVKGEPNISYICSRYYR 234
+ ++ G+ HR+IKP N++ + + KL DFG+A+ L E +S + Y
Sbjct: 124 GMNHLREN-GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYL 182
Query: 235 APELIFGAT-------EYTAAIDIWSAGCVLAELLLGQ-PLFPGE 271
P++ A +Y A +D+WS G G P P E
Sbjct: 183 HPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFE 227
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 175 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISYICSRY 232
I A+ Y+H +I + HRD+KP+NLL LKL DFG AK + + Y
Sbjct: 170 IGEAIQYLH-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 228
Query: 233 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGV 274
Y APE + G +Y + D WS G + LL G P F G+
Sbjct: 229 YVAPE-VLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGL 269
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 126/312 (40%), Gaps = 76/312 (24%)
Query: 66 SYMAERVVGHGSFGVV----FQAKCLETGEAVAIKKVLQDKRYKNRELQTMR-------- 113
+Y + ++G G VV + C E AV I V + E+Q +R
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEY--AVKIIDVTGGGSFSAEEVQELREATLKEVD 75
Query: 114 ----LLDHPNVVSLKHCF---------FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMS 160
+ HPN++ LK + F +K EL+ +Y+ E V +S
Sbjct: 76 ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELF-----DYLTEKV--------TLS 122
Query: 161 QRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVK 220
++ ++ IC AL + + + HRD+KP+N+L++ + +KL DFG + L
Sbjct: 123 EKETRKIMRALLEVIC-AL----HKLNIVHRDLKPENILLDDDMN-IKLTDFGFSCQLDP 176
Query: 221 GEPNISYICSRYYRAPELIFGATE-----YTAAIDIWSAGCVLAELLLGQPLFPGESGVD 275
GE S + Y APE+I + Y +D+WS G ++ LL G P F +
Sbjct: 177 GEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML 236
Query: 276 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYS 335
L I M+ NY +F P+ W DLVSR L
Sbjct: 237 MLRMI--------------MSGNY-QFGSPE-----WDD-----YSDTVKDLVSRFLVVQ 271
Query: 336 PNLRSTAFDAVG 347
P R TA +A+
Sbjct: 272 PQKRYTAEEALA 283
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 62/116 (53%), Gaps = 17/116 (14%)
Query: 175 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQL---KLCDFG-SAKVLVKGE------PN 224
+ AL ++HN G+ HRD+KP+N+L H +Q+ K+CDFG + + + G+ P
Sbjct: 120 VASALDFLHNK-GIAHRDLKPENILCE-HPNQVSPVKICDFGLGSGIKLNGDCSPISTPE 177
Query: 225 ISYIC-SRYYRAPELIFGATE----YTAAIDIWSAGCVLAELLLGQPLFPGESGVD 275
+ C S Y APE++ +E Y D+WS G +L LL G P F G G D
Sbjct: 178 LLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD 233
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 27/206 (13%)
Query: 71 RVVGHGSFGVVFQAKCLETGE---AVAIK--KVLQDKRYKNRELQ---TMRLLDHPNVVS 122
R +G G FG V Q + AVAIK K + + LQ TMR DHP++V
Sbjct: 44 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 103
Query: 123 LKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
L ++ +++ + L + E + Y + L + LY YQ+ ALAY+
Sbjct: 104 L----IGVITENPVWIIMELCTLGELRSFLQVRKYSLD----LASLILYAYQLSTALAYL 155
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-----YYRAPE 237
+ V HRDI +N+LV+ + +KL DFG ++ + E + Y S+ + APE
Sbjct: 156 ESKRFV-HRDIAARNVLVSSNDC-VKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPE 210
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLL 263
I +T+A D+W G + E+L+
Sbjct: 211 SI-NFRRFTSASDVWMFGVCMWEILM 235
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 27/206 (13%)
Query: 71 RVVGHGSFGVVFQAKCLETGE---AVAIK--KVLQDKRYKNRELQ---TMRLLDHPNVVS 122
R +G G FG V Q + AVAIK K + + LQ TMR DHP++V
Sbjct: 19 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 78
Query: 123 LKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
L ++ +++ + L + E + Y + L + LY YQ+ ALAY+
Sbjct: 79 L----IGVITENPVWIIMELCTLGELRSFLQVRKYSLD----LASLILYAYQLSTALAYL 130
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-----YYRAPE 237
+ V HRDI +N+LV+ + +KL DFG ++ + E + Y S+ + APE
Sbjct: 131 ESKRFV-HRDIAARNVLVSSNDC-VKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPE 185
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLL 263
I +T+A D+W G + E+L+
Sbjct: 186 SI-NFRRFTSASDVWMFGVCMWEILM 210
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 103/226 (45%), Gaps = 27/226 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 121
+G G F +V + + TG+ A K ++ +R + RE+ +R + HPN++
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYA-AKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNII 78
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
+L F + T+ + L+LE V + + +++ ++K QI +
Sbjct: 79 TLHDIFENKTD-----VVLILELVSGGELFDFLAEKESLTEDEATQFLK----QILDGVH 129
Query: 181 YIHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPE 237
Y+H+ + H D+KP+N+++ N ++KL DFG A + G + + + APE
Sbjct: 130 YLHSK-RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPE 188
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKV 283
++ D+WS G + LL G F GE+ + L I V
Sbjct: 189 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAV 233
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 27/206 (13%)
Query: 71 RVVGHGSFGVVFQAKCLETGE---AVAIK--KVLQDKRYKNRELQ---TMRLLDHPNVVS 122
R +G G FG V Q + AVAIK K + + LQ TMR DHP++V
Sbjct: 21 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 80
Query: 123 LKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
L ++ +++ + L + E + Y + L + LY YQ+ ALAY+
Sbjct: 81 L----IGVITENPVWIIMELCTLGELRSFLQVRKYSLD----LASLILYAYQLSTALAYL 132
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-----YYRAPE 237
+ V HRDI +N+LV+ + +KL DFG ++ + E + Y S+ + APE
Sbjct: 133 ESKRFV-HRDIAARNVLVSSNDC-VKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPE 187
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLL 263
I +T+A D+W G + E+L+
Sbjct: 188 SI-NFRRFTSASDVWMFGVCMWEILM 212
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 27/206 (13%)
Query: 71 RVVGHGSFGVVFQAKCLET---GEAVAIK--KVLQDKRYKNRELQ---TMRLLDHPNVVS 122
R +G G FG V Q + AVAIK K + + LQ TMR DHP++V
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 123 LKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
L ++ +++ + L + E + Y + L + LY YQ+ ALAY+
Sbjct: 76 L----IGVITENPVWIIMELCTLGELRSFLQVRKYSLD----LASLILYAYQLSTALAYL 127
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-----YYRAPE 237
+ V HRDI +N+LV+ + +KL DFG ++ + E + Y S+ + APE
Sbjct: 128 ESKRFV-HRDIAARNVLVSSNDC-VKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPE 182
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLL 263
I +T+A D+W G + E+L+
Sbjct: 183 SI-NFRRFTSASDVWMFGVCMWEILM 207
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 103/226 (45%), Gaps = 27/226 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 121
+G G F +V + + TG+ A K ++ +R + RE+ +R + HPN++
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYA-AKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNII 71
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
+L F + T+ + L+LE V + + +++ ++K QI +
Sbjct: 72 TLHDIFENKTD-----VVLILELVSGGELFDFLAEKESLTEDEATQFLK----QILDGVH 122
Query: 181 YIHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPE 237
Y+H+ + H D+KP+N+++ N ++KL DFG A + G + + + APE
Sbjct: 123 YLHSK-RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPE 181
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKV 283
++ D+WS G + LL G F GE+ + L I V
Sbjct: 182 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAV 226
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 103/226 (45%), Gaps = 27/226 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 121
+G G F +V + + TG+ A K ++ +R + RE+ +R + HPN++
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYA-AKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNII 92
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
+L F + T+ + L+LE V + + +++ ++K QI +
Sbjct: 93 TLHDIFENKTD-----VVLILELVSGGELFDFLAEKESLTEDEATQFLK----QILDGVH 143
Query: 181 YIHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPE 237
Y+H+ + H D+KP+N+++ N ++KL DFG A + G + + + APE
Sbjct: 144 YLHSK-RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPE 202
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKV 283
++ D+WS G + LL G F GE+ + L I V
Sbjct: 203 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAV 247
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 30/209 (14%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNR------ELQTMRLLDHPNVVSLKHC 126
+G GSFG V +A+ G VA+K +++ + R E+ M+ L HPN+V
Sbjct: 45 IGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV----- 97
Query: 127 FFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN- 184
F L++V EY+ +++R++ H +++ Y + + + Y+HN
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLL-HKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY------YRAPEL 238
+ HRD+K NLLV+ + +K+CDFG +++ ++ S+ + APE+
Sbjct: 157 NPPIVHRDLKSPNLLVD-KKYTVKVCDFGLSRLKAS-----XFLXSKXAAGTPEWMAPEV 210
Query: 239 IFGATEYTAAIDIWSAGCVLAEL-LLGQP 266
+ + D++S G +L EL L QP
Sbjct: 211 LRDEPSNEKS-DVYSFGVILWELATLQQP 238
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 27/206 (13%)
Query: 71 RVVGHGSFGVVFQAKCLETGE---AVAIK--KVLQDKRYKNRELQ---TMRLLDHPNVVS 122
R +G G FG V Q + AVAIK K + + LQ TMR DHP++V
Sbjct: 18 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 77
Query: 123 LKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
L ++ +++ + L + E + Y + L + LY YQ+ ALAY+
Sbjct: 78 L----IGVITENPVWIIMELCTLGELRSFLQVRKYSLD----LASLILYAYQLSTALAYL 129
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-----YYRAPE 237
+ V HRDI +N+LV+ + +KL DFG ++ + E + Y S+ + APE
Sbjct: 130 ESKRFV-HRDIAARNVLVSSNDC-VKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPE 184
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLL 263
I +T+A D+W G + E+L+
Sbjct: 185 SI-NFRRFTSASDVWMFGVCMWEILM 209
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 27/206 (13%)
Query: 71 RVVGHGSFGVVFQAKCLETGE---AVAIK--KVLQDKRYKNRELQ---TMRLLDHPNVVS 122
R +G G FG V Q + AVAIK K + + LQ TMR DHP++V
Sbjct: 13 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 72
Query: 123 LKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
L ++ +++ + L + E + Y + L + LY YQ+ ALAY+
Sbjct: 73 L----IGVITENPVWIIMELCTLGELRSFLQVRKYSLD----LASLILYAYQLSTALAYL 124
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-----YYRAPE 237
+ V HRDI +N+LV+ + +KL DFG ++ + E + Y S+ + APE
Sbjct: 125 ESKRFV-HRDIAARNVLVSSNDC-VKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPE 179
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLL 263
I +T+A D+W G + E+L+
Sbjct: 180 SI-NFRRFTSASDVWMFGVCMWEILM 204
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 27/206 (13%)
Query: 71 RVVGHGSFGVVFQAKCLETGE---AVAIK--KVLQDKRYKNRELQ---TMRLLDHPNVVS 122
R +G G FG V Q + AVAIK K + + LQ TMR DHP++V
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 123 LKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
L ++ +++ + L + E + Y + L + LY YQ+ ALAY+
Sbjct: 76 L----IGVITENPVWIIMELCTLGELRSFLQVRKYSLD----LASLILYAYQLSTALAYL 127
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-----YYRAPE 237
+ V HRDI +N+LV+ + +KL DFG ++ + E + Y S+ + APE
Sbjct: 128 ESKRFV-HRDIAARNVLVSSNDC-VKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPE 182
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLL 263
I +T+A D+W G + E+L+
Sbjct: 183 SI-NFRRFTSASDVWMFGVCMWEILM 207
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 106/226 (46%), Gaps = 28/226 (12%)
Query: 59 GQPKQTIS---YMAERVVGHGSFGVVFQAKCLE-TGEA--VAIKKVLQDKRYKNRE---- 108
G P+ I+ + R++G G FG V++ GE VA+K +D N+E
Sbjct: 15 GSPQYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMS 74
Query: 109 -LQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIY 167
M+ LDHP++V L E++ ++ + L E H + ++ + ++
Sbjct: 75 EAVIMKNLDHPHIVKL----IGIIEEEPTWIIMELYPYGELGHYLERN----KNSLKVLT 126
Query: 168 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 227
+ LY QIC+A+AY+ +I HRDI +N+LV +KL DFG ++ ++ E
Sbjct: 127 LVLYSLQICKAMAYLE-SINCVHRDIAVRNILV-ASPECVKLGDFGLSR-YIEDEDYYKA 183
Query: 228 ICSRY---YRAPELIFGATEYTAAIDIWSAGCVLAELLL--GQPLF 268
+R + +PE I +T A D+W + E+L QP F
Sbjct: 184 SVTRLPIKWMSPESI-NFRRFTTASDVWMFAVCMWEILSFGKQPFF 228
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 99/206 (48%), Gaps = 27/206 (13%)
Query: 71 RVVGHGSFGVVFQAKCLET---GEAVAIK--KVLQDKRYKNRELQ---TMRLLDHPNVVS 122
R +G G FG V Q + AVAIK K + + LQ TMR DHP++V
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 455
Query: 123 LKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
L ++ +++ + L + E R K S + L + LY YQ+ ALAY+
Sbjct: 456 L----IGVITENPVWIIMELCTLGEL--RSFLQVRKFS--LDLASLILYAYQLSTALAYL 507
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-----YYRAPE 237
+ V HRDI +N+LV+ + +KL DFG ++ + E + Y S+ + APE
Sbjct: 508 ESKRFV-HRDIAARNVLVSSNDC-VKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPE 562
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLL 263
I +T+A D+W G + E+L+
Sbjct: 563 SI-NFRRFTSASDVWMFGVCMWEILM 587
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 25/211 (11%)
Query: 71 RVVGHGSFGVVFQAKCLE-TGEA--VAIKKVLQDKRYKNRE-----LQTMRLLDHPNVVS 122
R++G G FG V++ GE VA+K +D N+E M+ LDHP++V
Sbjct: 18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 77
Query: 123 LKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
L E++ ++ + L E H + ++ + ++ + LY QIC+A+AY+
Sbjct: 78 L----IGIIEEEPTWIIMELYPYGELGHYLERN----KNSLKVLTLVLYSLQICKAMAYL 129
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY---YRAPELI 239
+I HRDI +N+LV +KL DFG ++ ++ E +R + +PE I
Sbjct: 130 E-SINCVHRDIAVRNILV-ASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSPESI 186
Query: 240 FGATEYTAAIDIWSAGCVLAELLL--GQPLF 268
+T A D+W + E+L QP F
Sbjct: 187 -NFRRFTTASDVWMFAVCMWEILSFGKQPFF 216
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 71 RVVGHGSFGVVFQAKCLE-TGEA--VAIKKVLQDKRYKNRE-----LQTMRLLDHPNVVS 122
R++G G FG V++ GE VA+K +D N+E M+ LDHP++V
Sbjct: 14 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 73
Query: 123 LKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
L E++ ++ + L E H + ++ + ++ + LY QIC+A+AY+
Sbjct: 74 L----IGIIEEEPTWIIMELYPYGELGHYLERN----KNSLKVLTLVLYSLQICKAMAYL 125
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY---YRAPELI 239
+I HRDI +N+LV +KL DFG ++ ++ E +R + +PE I
Sbjct: 126 E-SINCVHRDIAVRNILV-ASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSPESI 182
Query: 240 FGATEYTAAIDIWSAGCVLAELLL--GQPLFPGES 272
+T A D+W + E+L QP F E+
Sbjct: 183 -NFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN 216
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 116/265 (43%), Gaps = 34/265 (12%)
Query: 71 RVVGH-GSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRE-----LQTMRLLDHPNVVSLK 124
++G G FG V++A+ ET +A KV+ K + E + + DHPN+V L
Sbjct: 15 EIIGELGDFGKVYKAQNKETS-VLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 73
Query: 125 HCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN 184
F+ E L +++E+ + ++ + + +++ Q AL Y+H+
Sbjct: 74 DAFYY-----ENNLWILIEFCAGGAVDAV--MLELERPLTESQIQVVCKQTLDALNYLHD 126
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFG-SAK-VLVKGEPNISYICSRYYRAPELIFGA 242
+ HRD+K N+L +KL DFG SAK + S+I + Y+ APE++
Sbjct: 127 N-KIIHRDLKAGNILFT-LDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCE 184
Query: 243 TE----YTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIK----VLGTPTREEI-- 292
T Y D+WS G L E+ +P + + L++I K L P+R
Sbjct: 185 TSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNF 244
Query: 293 -----KCMNPNY-TEFKFPQIKAHP 311
KC+ N + Q+ HP
Sbjct: 245 KDFLKKCLEKNVDARWTTSQLLQHP 269
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 102/209 (48%), Gaps = 30/209 (14%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNR------ELQTMRLLDHPNVVSLKHC 126
+G GSFG V +A+ G VA+K +++ + R E+ M+ L HPN+V
Sbjct: 45 IGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV----- 97
Query: 127 FFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN- 184
F L++V EY+ +++R++ H +++ Y + + + Y+HN
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLL-HKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY------YRAPEL 238
+ HR++K NLLV+ + +K+CDFG +++ +++ S+ + APE+
Sbjct: 157 NPPIVHRNLKSPNLLVD-KKYTVKVCDFGLSRLKAS-----TFLSSKSAAGTPEWMAPEV 210
Query: 239 IFGATEYTAAIDIWSAGCVLAEL-LLGQP 266
+ + D++S G +L EL L QP
Sbjct: 211 LRDEPSNEKS-DVYSFGVILWELATLQQP 238
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 101/226 (44%), Gaps = 28/226 (12%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIK-----KVLQDKRYKNRELQTMRLLDHPNVV 121
++ ++G G+ VF+ + +TG+ AIK L+ + RE + ++ L+H N+V
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIV 70
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVP----ETVHRVIKHHYKMSQRMPLIYVKLYFYQICR 177
L TT + ++ L++E+ P TV + Y + + LI ++ +
Sbjct: 71 KLFAIEEETTTRHKV---LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLR----DVVG 123
Query: 178 ALAYIHNTIGVCHRDIKPQNLL--VNPHTHQL-KLCDFGSAKVLVKGEPNISYICSRYYR 234
+ ++ G+ HR+IKP N++ + + KL DFG+A+ L E + + Y
Sbjct: 124 GMNHLREN-GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYL 182
Query: 235 APELIFGAT-------EYTAAIDIWSAGCVLAELLLGQ-PLFPGES 272
P++ A +Y A +D+WS G G P P E
Sbjct: 183 HPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEG 228
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 122/312 (39%), Gaps = 76/312 (24%)
Query: 66 SYMAERVVGHGSFGVV----FQAKCLETGEAVAIKKVLQDKRYKNRELQTMR-------- 113
+Y + ++G G VV + C E AV I V + E+Q +R
Sbjct: 5 NYEPKEILGRGVSSVVRRCIHKPTCKEY--AVKIIDVTGGGSFSAEEVQELREATLKEVD 62
Query: 114 ----LLDHPNVVSLKHCF---------FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMS 160
+ HPN++ LK + F +K EL+ +Y+ E V K K+
Sbjct: 63 ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELF-----DYLTEKVTLSEKETRKIM 117
Query: 161 QRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVK 220
+ + + L+ + + HRD+KP+N+L++ + +KL DFG + L
Sbjct: 118 RALLEVICALH-------------KLNIVHRDLKPENILLDDDMN-IKLTDFGFSCQLDP 163
Query: 221 GEPNISYICSRYYRAPELIFGATE-----YTAAIDIWSAGCVLAELLLGQPLFPGESGVD 275
GE + Y APE+I + Y +D+WS G ++ LL G P F +
Sbjct: 164 GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML 223
Query: 276 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYS 335
L I M+ NY +F P+ + DLVSR L
Sbjct: 224 MLRMI--------------MSGNY-QFGSPEWDDY----------SDTVKDLVSRFLVVQ 258
Query: 336 PNLRSTAFDAVG 347
P R TA +A+
Sbjct: 259 PQKRYTAEEALA 270
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 26/207 (12%)
Query: 70 ERVVGHGSFGVVFQAKCLETGE---AVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 121
ERV+G G FG V + G+ AVAIK + K R E M DHPNVV
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
L+ + +V+E++ + ++ H + +I + I +
Sbjct: 108 HLEGVVTRGKP-----VMIVIEFMENGALDAFLRKH---DGQFTVIQLVGMLRGIAAGMR 159
Query: 181 YIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-----YYRA 235
Y+ + +G HRD+ +N+LVN + K+ DFG ++V ++ +P Y + + A
Sbjct: 160 YLAD-MGYVHRDLAARNILVNSNL-VCKVSDFGLSRV-IEDDPEAVYTTTGGKIPVRWTA 216
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELL 262
PE I ++T+A D+WS G V+ E++
Sbjct: 217 PEAI-QYRKFTSASDVWSYGIVMWEVM 242
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 125/312 (40%), Gaps = 76/312 (24%)
Query: 66 SYMAERVVGHGSFGVV----FQAKCLETGEAVAIKKVLQDKRYKNRELQTMR-------- 113
+Y + ++G G VV + C E AV I V + E+Q +R
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEY--AVKIIDVTGGGSFSAEEVQELREATLKEVD 75
Query: 114 ----LLDHPNVVSLKHCF---------FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMS 160
+ HPN++ LK + F +K EL+ +Y+ E V +S
Sbjct: 76 ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELF-----DYLTEKV--------TLS 122
Query: 161 QRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVK 220
++ ++ IC AL + + + HRD+KP+N+L++ + +KL DFG + L
Sbjct: 123 EKETRKIMRALLEVIC-AL----HKLNIVHRDLKPENILLDDDMN-IKLTDFGFSCQLDP 176
Query: 221 GEPNISYICSRYYRAPELIFGATE-----YTAAIDIWSAGCVLAELLLGQPLFPGESGVD 275
GE + Y APE+I + Y +D+WS G ++ LL G P F +
Sbjct: 177 GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML 236
Query: 276 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYS 335
L I M+ NY +F P+ W DLVSR L
Sbjct: 237 MLRMI--------------MSGNY-QFGSPE-----WDD-----YSDTVKDLVSRFLVVQ 271
Query: 336 PNLRSTAFDAVG 347
P R TA +A+
Sbjct: 272 PQKRYTAEEALA 283
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 26/217 (11%)
Query: 61 PKQTISYMAERVVGHGSFGVVFQAKCLETGE---AVAIKKV-----LQDKRYKNRELQTM 112
P + + ++RV+G G FGVV+ + ++ + AIK + +Q RE M
Sbjct: 17 PHERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLM 76
Query: 113 RLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYF 172
R L+HPNV++L + L P H + + QR P + + F
Sbjct: 77 RGLNHPNVLALIGIMLPPEGLPHVLL-------PYMCHGDLLQFIRSPQRNPTVKDLISF 129
Query: 173 -YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 231
Q+ R + Y+ V HRD+ +N +++ + +K+ DFG A+ ++ E S R
Sbjct: 130 GLQVARGMEYLAEQKFV-HRDLAARNCMLD-ESFTVKVADFGLARDILDRE-YYSVQQHR 186
Query: 232 YYRAPELIFGATE------YTAAIDIWSAGCVLAELL 262
+ R P + + A E +T D+WS G +L ELL
Sbjct: 187 HARLP-VKWTALESLQTYRFTTKSDVWSFGVLLWELL 222
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 127/294 (43%), Gaps = 58/294 (19%)
Query: 72 VVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN---------RELQTMRLLDHPNVVS 122
V+G G F VV + ETG+ A+K V K + RE +L HP++V
Sbjct: 33 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 92
Query: 123 LKHCFFSTTEKDELYLNLVLEYV--PETVHRVIKHH---YKMSQRMPLIYVKLYFYQICR 177
L T D + L +V E++ + ++K + S+ + Y++ QI
Sbjct: 93 L----LETYSSDGM-LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR----QILE 143
Query: 178 ALAYIHNTIGVCHRDIKPQNLLV--NPHTHQLKLCDFGSAKVLVKGEPNI---SYICSRY 232
AL Y H+ + HRD+KP +L+ ++ +KL FG A L GE + + + +
Sbjct: 144 ALRYCHDN-NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL--GESGLVAGGRVGTPH 200
Query: 233 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 292
+ APE++ Y +D+W G +L LL G F G ++L E I + +
Sbjct: 201 FMAPEVV-KREPYGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFEGI------IKGKY 251
Query: 293 KCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
K MNP W I + A DLV R+L P R T ++A+
Sbjct: 252 K-MNPRQ------------WSHISES-----AKDLVRRMLMLDPAERITVYEAL 287
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 86/176 (48%), Gaps = 26/176 (14%)
Query: 117 HPNVVSLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQI 175
HP++V + + T + +V+EYV +++ R Q++P+ Y +I
Sbjct: 138 HPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKR------SKGQKLPVAEAIAYLLEI 191
Query: 176 CRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL-----VKGEPNISYICS 230
AL+Y+H +IG+ + D+KP+N+++ QLKL D G+ + + G P
Sbjct: 192 LPALSYLH-SIGLVYNDLKPENIMLT--EEQLKLIDLGAVSRINSFGYLYGTPG------ 242
Query: 231 RYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 286
++APE++ T T A DI++ G LA L L P G VD L E VL T
Sbjct: 243 --FQAPEIV--RTGPTVATDIYTVGRTLAALTLDLPTRNGRY-VDGLPEDDPVLKT 293
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 97/207 (46%), Gaps = 26/207 (12%)
Query: 70 ERVVGHGSFGVVFQAKCLETGE---AVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 121
++VVG G FG V + + +VAIK + K R E M DHPN++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
L+ + + +V EY+ ++ ++ H + +I + I +
Sbjct: 110 RLEGVVTKSKP-----VMIVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMK 161
Query: 181 YIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-----YYRA 235
Y+ + +G HRD+ +N+L+N + K+ DFG A+VL + +P +Y + +
Sbjct: 162 YLSD-MGYVHRDLAARNILINSNL-VCKVSDFGLARVL-EDDPEAAYTTRGGKIPIRWTS 218
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELL 262
PE I ++T+A D+WS G VL E++
Sbjct: 219 PEAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 26/207 (12%)
Query: 70 ERVVGHGSFGVVFQAKCLETGE---AVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 121
ERV+G G FG V + G+ VAIK + K R E M DHPN++
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 86
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
L+ + + +V EY+ ++ +K K + +I + I +
Sbjct: 87 HLEGVVTKSKP-----VMIVTEYMENGSLDTFLK---KNDGQFTVIQLVGMLRGISAGMK 138
Query: 181 YIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-----YYRA 235
Y+ + +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y + A
Sbjct: 139 YLSD-MGYVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTA 195
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELL 262
PE I ++T+A D+WS G V+ E++
Sbjct: 196 PEAI-AFRKFTSASDVWSYGIVMWEVV 221
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 99/209 (47%), Gaps = 33/209 (15%)
Query: 71 RVVGHGSFGVVFQAKCLET---GEAVAIK--KVLQDKRYKNRELQ---TMRLLDHPNVVS 122
R +G G FG V Q + AVAIK K + + LQ TMR DHP++V
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 123 LKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
L ++ +++ + L + E R K S + L + LY YQ+ ALAY+
Sbjct: 76 L----IGVITENPVWIIMELCTLGEL--RSFLQVRKFS--LDLASLILYAYQLSTALAYL 127
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVL--------VKGEPNISYICSRYYR 234
+ V HRDI +N+LV+ + +KL DFG ++ + KG+ I ++
Sbjct: 128 ESKRFV-HRDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTXXKASKGKLPIKWM------ 179
Query: 235 APELIFGATEYTAAIDIWSAGCVLAELLL 263
APE I +T+A D+W G + E+L+
Sbjct: 180 APESI-NFRRFTSASDVWMFGVCMWEILM 207
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 127/294 (43%), Gaps = 58/294 (19%)
Query: 72 VVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN---------RELQTMRLLDHPNVVS 122
V+G G F VV + ETG+ A+K V K + RE +L HP++V
Sbjct: 31 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 123 LKHCFFSTTEKDELYLNLVLEYV--PETVHRVIKHH---YKMSQRMPLIYVKLYFYQICR 177
L T D + L +V E++ + ++K + S+ + Y++ QI
Sbjct: 91 L----LETYSSDGM-LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR----QILE 141
Query: 178 ALAYIHNTIGVCHRDIKPQNLLV--NPHTHQLKLCDFGSAKVLVKGEPNI---SYICSRY 232
AL Y H+ + HRD+KP +L+ ++ +KL FG A L GE + + + +
Sbjct: 142 ALRYCHDN-NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL--GESGLVAGGRVGTPH 198
Query: 233 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 292
+ APE++ Y +D+W G +L LL G F G ++L E I + +
Sbjct: 199 FMAPEVV-KREPYGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFEGI------IKGKY 249
Query: 293 KCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTAFDAV 346
K MNP W I + A DLV R+L P R T ++A+
Sbjct: 250 K-MNPR------------QWSHISES-----AKDLVRRMLMLDPAERITVYEAL 285
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 130/296 (43%), Gaps = 57/296 (19%)
Query: 73 VGHGSFGVVFQAKCL-----ETGEAVAIKKVLQDKRY-KNRELQT-MRLLDH-------- 117
+G G+FG V +A T VA+K + + + ++R L + +++L H
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 118 -----------PNVVSLKHCFFSTTEKDELYL----NLVLEYVPETVHRVIKHHYKMSQR 162
P +V ++ C F YL N + Y PE +++
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLST---YLRSKRNEFVPYKPEDLYKDF--------- 144
Query: 163 MPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGE 222
+ L ++ Y +Q+ + + ++ + + HRD+ +N+L++ + +K+CDFG A+ + K
Sbjct: 145 LTLEHLIXYSFQVAKGMEFLASRKXI-HRDLAARNILLS-EKNVVKICDFGLARDIXKDP 202
Query: 223 PNISYICSRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLV 278
+ +R + APE IF YT D+WS G +L E+ LG +PG V
Sbjct: 203 DXVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------V 254
Query: 279 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH-KIFQKRMPPEAVDLVSRLLQ 333
+I + +E + P+YT + Q WH + Q+ E V+ + LLQ
Sbjct: 255 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 40/222 (18%)
Query: 70 ERVVGHGSFGVVFQAKCLETGEAVAIKK-VLQDKRYK----------NRELQTMRLLDHP 118
E+ +G G FG+V + + ++ VAIK +L D + RE+ M L+HP
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 119 NVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIK--HHYKMSQRMPLIYVKLYFYQ 174
N+V L + +V+E+VP + HR++ H K S ++ L+
Sbjct: 84 NIVKLYGLMHNPP-------RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLM------LD 130
Query: 175 ICRALAYIHN-TIGVCHRDIKPQNLLVNPHTHQLKLC----DFGSAKVLVKGEPNISYIC 229
I + Y+ N + HRD++ N+ + +C DFG+++ V ++S +
Sbjct: 131 IALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVH---SVSGLL 187
Query: 230 SRY-YRAPELIFGATE--YTAAIDIWSAGCVLAELLLGQPLF 268
+ + APE I GA E YT D +S +L +L G+ F
Sbjct: 188 GNFQWMAPETI-GAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 26/207 (12%)
Query: 70 ERVVGHGSFGVVFQAKCLETGE---AVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 121
++VVG G FG V + + +VAIK + K R E M DHPN++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
L+ + + +V EY+ ++ ++ H + +I + I +
Sbjct: 110 RLEGVVTKSKP-----VMIVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMK 161
Query: 181 YIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-----YYRA 235
Y+ + +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y + +
Sbjct: 162 YLSD-MGFVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTS 218
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELL 262
PE I ++T+A D+WS G VL E++
Sbjct: 219 PEAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 104/226 (46%), Gaps = 27/226 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 121
+G G F VV + + TG A K ++ +R K+ RE+ ++ + HPNV+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
+L + + T+ + L+LE V + + +++ ++K QI +
Sbjct: 78 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK----QILNGVY 128
Query: 181 YIHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPE 237
Y+H ++ + H D+KP+N+++ N ++K+ DFG A + G + + + APE
Sbjct: 129 YLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKV 283
++ D+WS G + LL G F G++ + L + V
Sbjct: 188 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 104/226 (46%), Gaps = 27/226 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 121
+G G F VV + + TG A K ++ +R K+ RE+ ++ + HPNV+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
+L + + T+ + L+LE V + + +++ ++K QI +
Sbjct: 78 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK----QILNGVY 128
Query: 181 YIHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPE 237
Y+H ++ + H D+KP+N+++ N ++K+ DFG A + G + + + APE
Sbjct: 129 YLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKV 283
++ D+WS G + LL G F G++ + L + V
Sbjct: 188 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 17/116 (14%)
Query: 175 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQL---KLCDFG-SAKVLVKGE------PN 224
+ AL ++HN G+ HRD+KP+N+L H +Q+ K+CDF + + + G+ P
Sbjct: 120 VASALDFLHNK-GIAHRDLKPENILCE-HPNQVSPVKICDFDLGSGIKLNGDCSPISTPE 177
Query: 225 ISYIC-SRYYRAPELIFGATE----YTAAIDIWSAGCVLAELLLGQPLFPGESGVD 275
+ C S Y APE++ +E Y D+WS G +L LL G P F G G D
Sbjct: 178 LLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD 233
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 104/226 (46%), Gaps = 27/226 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 121
+G G F VV + + TG A K ++ +R K+ RE+ ++ + HPNV+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
+L + + T+ + L+LE V + + +++ ++K QI +
Sbjct: 78 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK----QILNGVY 128
Query: 181 YIHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPE 237
Y+H ++ + H D+KP+N+++ N ++K+ DFG A + G + + + APE
Sbjct: 129 YLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKV 283
++ D+WS G + LL G F G++ + L + V
Sbjct: 188 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 26/207 (12%)
Query: 70 ERVVGHGSFGVVFQAKCLETGE---AVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 121
++VVG G FG V + + +VAIK + K R E M DHPN++
Sbjct: 38 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 97
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
L+ + + +V EY+ ++ ++ H + +I + I +
Sbjct: 98 RLEGVVTKSKP-----VMIVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMK 149
Query: 181 YIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-----YYRA 235
Y+ + +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y + +
Sbjct: 150 YLSD-MGYVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTS 206
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELL 262
PE I ++T+A D+WS G VL E++
Sbjct: 207 PEAI-AYRKFTSASDVWSYGIVLWEVM 232
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 26/207 (12%)
Query: 70 ERVVGHGSFGVVFQAKCLETGE---AVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 121
++VVG G FG V + + +VAIK + K R E M DHPN++
Sbjct: 21 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 80
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
L+ + + +V EY+ ++ ++ H + +I + I +
Sbjct: 81 RLEGVVTKSKP-----VMIVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMK 132
Query: 181 YIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-----YYRA 235
Y+ + +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y + +
Sbjct: 133 YLSD-MGYVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTS 189
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELL 262
PE I ++T+A D+WS G VL E++
Sbjct: 190 PEAI-AYRKFTSASDVWSYGIVLWEVM 215
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 26/207 (12%)
Query: 70 ERVVGHGSFGVVFQAKCLETGE---AVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 121
++VVG G FG V + + +VAIK + K R E M DHPN++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
L+ + + +V EY+ ++ ++ H + +I + I +
Sbjct: 110 RLEGVVTKSKP-----VMIVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMK 161
Query: 181 YIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-----YYRA 235
Y+ + +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y + +
Sbjct: 162 YLSD-MGYVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTS 218
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELL 262
PE I ++T+A D+WS G VL E++
Sbjct: 219 PEAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 104/226 (46%), Gaps = 27/226 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 121
+G G F VV + + TG A K ++ +R K+ RE+ ++ + HPNV+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
+L + + T+ + L+LE V + + +++ ++K QI +
Sbjct: 78 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK----QILNGVY 128
Query: 181 YIHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPE 237
Y+H ++ + H D+KP+N+++ N ++K+ DFG A + G + + + APE
Sbjct: 129 YLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKV 283
++ D+WS G + LL G F G++ + L + V
Sbjct: 188 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 104/226 (46%), Gaps = 27/226 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 121
+G G F VV + + TG A K ++ +R K+ RE+ ++ + HPNV+
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
+L + + T+ + L+LE V + + +++ ++K QI +
Sbjct: 78 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK----QILNGVY 128
Query: 181 YIHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPE 237
Y+H ++ + H D+KP+N+++ N ++K+ DFG A + G + + + APE
Sbjct: 129 YLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKV 283
++ D+WS G + LL G F G++ + L + V
Sbjct: 188 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 104/226 (46%), Gaps = 27/226 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 121
+G G F VV + + TG A K ++ +R K+ RE+ ++ + HPNV+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
+L + + T+ + L+LE V + + +++ ++K QI +
Sbjct: 78 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK----QILNGVY 128
Query: 181 YIHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPE 237
Y+H ++ + H D+KP+N+++ N ++K+ DFG A + G + + + APE
Sbjct: 129 YLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKV 283
++ D+WS G + LL G F G++ + L + V
Sbjct: 188 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 104/226 (46%), Gaps = 27/226 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 121
+G G F VV + + TG A K ++ +R K+ RE+ ++ + HPNV+
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
+L + + T+ + L+LE V + + +++ ++K QI +
Sbjct: 77 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK----QILNGVY 127
Query: 181 YIHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPE 237
Y+H ++ + H D+KP+N+++ N ++K+ DFG A + G + + + APE
Sbjct: 128 YLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 186
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKV 283
++ D+WS G + LL G F G++ + L + V
Sbjct: 187 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 231
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 26/207 (12%)
Query: 70 ERVVGHGSFGVVFQAKCLETGE---AVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 121
++VVG G FG V + + +VAIK + K R E M DHPN++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
L+ + + +V EY+ ++ ++ H + +I + I +
Sbjct: 110 RLEGVVTKSKP-----VMIVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMK 161
Query: 181 YIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-----YYRA 235
Y+ + +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y + +
Sbjct: 162 YLSD-MGYVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTS 218
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELL 262
PE I ++T+A D+WS G VL E++
Sbjct: 219 PEAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 26/207 (12%)
Query: 70 ERVVGHGSFGVVFQAKCLETGE---AVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 121
++VVG G FG V + + +VAIK + K R E M DHPN++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
L+ + + +V EY+ ++ ++ H + +I + I +
Sbjct: 110 RLEGVVTKSKP-----VMIVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMK 161
Query: 181 YIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-----YYRA 235
Y+ + +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y + +
Sbjct: 162 YLSD-MGYVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTS 218
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELL 262
PE I ++T+A D+WS G VL E++
Sbjct: 219 PEAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 104/226 (46%), Gaps = 27/226 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 121
+G G F VV + + TG A K ++ +R K+ RE+ ++ + HPNV+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
+L + + T+ + L+LE V + + +++ ++K QI +
Sbjct: 78 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK----QILNGVY 128
Query: 181 YIHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPE 237
Y+H ++ + H D+KP+N+++ N ++K+ DFG A + G + + + APE
Sbjct: 129 YLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKV 283
++ D+WS G + LL G F G++ + L + V
Sbjct: 188 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 104/226 (46%), Gaps = 27/226 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 121
+G G F VV + + TG A K ++ +R K+ RE+ ++ + HPNV+
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
+L + + T+ + L+LE V + + +++ ++K QI +
Sbjct: 77 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK----QILNGVY 127
Query: 181 YIHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPE 237
Y+H ++ + H D+KP+N+++ N ++K+ DFG A + G + + + APE
Sbjct: 128 YLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 186
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKV 283
++ D+WS G + LL G F G++ + L + V
Sbjct: 187 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 231
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 116/286 (40%), Gaps = 46/286 (16%)
Query: 68 MAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN------RELQTMRLLDH-PNV 120
+ + +G G F VV Q TG+ A K + + +R ++ E+ + L P V
Sbjct: 32 LTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRV 91
Query: 121 VSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRA 178
++L + +T+E + L+LEY E + +M +I + QI
Sbjct: 92 INLHEVYENTSE-----IILILEYAAGGEIFSLCLPELAEMVSENDVIRL---IKQILEG 143
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNP--HTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAP 236
+ Y+H + H D+KPQN+L++ +K+ DFG ++ + + + Y AP
Sbjct: 144 VYYLHQN-NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAP 202
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 296
E I T A D+W+ G + LL F GE + + I +V N
Sbjct: 203 E-ILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQV------------N 249
Query: 297 PNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTA 342
+Y+E F + A D + LL +P R TA
Sbjct: 250 VDYSEETFSSVSQL-------------ATDFIQSLLVKNPEKRPTA 282
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 26/207 (12%)
Query: 70 ERVVGHGSFGVVFQAKCLETGE---AVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 121
++VVG G FG V + + +VAIK + K R E M DHPN++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
L+ + + +V EY+ ++ ++ H + +I + I +
Sbjct: 110 RLEGVVTKSKP-----VMIVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMK 161
Query: 181 YIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-----YYRA 235
Y+ + +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y + +
Sbjct: 162 YLSD-MGYVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTS 218
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELL 262
PE I ++T+A D+WS G VL E++
Sbjct: 219 PEAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 104/226 (46%), Gaps = 27/226 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 121
+G G F VV + + TG A K ++ +R K+ RE+ ++ + HPNV+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
+L + + T+ + L+LE V + + +++ ++K QI +
Sbjct: 78 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK----QILNGVY 128
Query: 181 YIHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPE 237
Y+H ++ + H D+KP+N+++ N ++K+ DFG A + G + + + APE
Sbjct: 129 YLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKV 283
++ D+WS G + LL G F G++ + L + V
Sbjct: 188 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 26/207 (12%)
Query: 70 ERVVGHGSFGVVFQAKCLETGE---AVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 121
++VVG G FG V + + +VAIK + K R E M DHPN++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
L+ + + +V EY+ ++ ++ H + +I + I +
Sbjct: 110 RLEGVVTKSKP-----VMIVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMK 161
Query: 181 YIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-----YYRA 235
Y+ + +G HRD+ +N+L+N + K+ DFG +VL + +P +Y + +
Sbjct: 162 YLSD-MGYVHRDLAARNILINSNL-VCKVSDFGLGRVL-EDDPEAAYTTRGGKIPIRWTS 218
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELL 262
PE I ++T+A D+WS G VL E++
Sbjct: 219 PEAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 26/207 (12%)
Query: 70 ERVVGHGSFGVVFQAKCLETGE---AVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 121
++VVG G FG V + + +VAIK + K R E M DHPN++
Sbjct: 48 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 107
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
L+ + + +V EY+ ++ ++ H + +I + I +
Sbjct: 108 RLEGVVTKSKP-----VMIVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMK 159
Query: 181 YIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-----YYRA 235
Y+ + +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y + +
Sbjct: 160 YLSD-MGYVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTS 216
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELL 262
PE I ++T+A D+WS G VL E++
Sbjct: 217 PEAI-AYRKFTSASDVWSYGIVLWEVM 242
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 104/226 (46%), Gaps = 27/226 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 121
+G G F VV + + TG A K ++ +R K+ RE+ ++ + HPNV+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
+L + + T+ + L+LE V + + +++ ++K QI +
Sbjct: 78 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK----QILNGVY 128
Query: 181 YIHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPE 237
Y+H ++ + H D+KP+N+++ N ++K+ DFG A + G + + + APE
Sbjct: 129 YLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPE 187
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKV 283
++ D+WS G + LL G F G++ + L + V
Sbjct: 188 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 104/226 (46%), Gaps = 27/226 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 121
+G G F VV + + TG A K ++ +R K+ RE+ ++ + HPNV+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
+L + + T+ + L+LE V + + +++ ++K QI +
Sbjct: 78 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK----QILNGVY 128
Query: 181 YIHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPE 237
Y+H ++ + H D+KP+N+++ N ++K+ DFG A + G + + + APE
Sbjct: 129 YLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKV 283
++ D+WS G + LL G F G++ + L + V
Sbjct: 188 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 24/206 (11%)
Query: 70 ERVVGHGSFGVVFQAKCLETGE---AVAIKKV---LQDKRYKN--RELQTMRLLDHPNVV 121
E+V+G G FG V + G+ VAIK + DK+ ++ E M DHPN++
Sbjct: 34 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 93
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAY 181
L+ + ++ EY+ K R +I + I + Y
Sbjct: 94 HLEGVVTKCKP-----VMIITEYMENGSLDAFLR--KNDGRFTVIQLVGMLRGIGSGMKY 146
Query: 182 IHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 236
+ + V HRD+ +N+LVN + K+ DFG ++VL + +P +Y + AP
Sbjct: 147 LSDMSAV-HRDLAARNILVNSNL-VCKVSDFGMSRVL-EDDPEAAYTTRGGKIPIRWTAP 203
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELL 262
E I ++T+A D+WS G V+ E++
Sbjct: 204 EAI-AYRKFTSASDVWSYGIVMWEVM 228
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 104/226 (46%), Gaps = 27/226 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 121
+G G F VV + + TG A K ++ +R K+ RE+ ++ + HPNV+
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
+L + + T+ + L+LE V + + +++ ++K QI +
Sbjct: 78 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK----QILNGVY 128
Query: 181 YIHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPE 237
Y+H ++ + H D+KP+N+++ N ++K+ DFG A + G + + + APE
Sbjct: 129 YLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKV 283
++ D+WS G + LL G F G++ + L + V
Sbjct: 188 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 96/206 (46%), Gaps = 24/206 (11%)
Query: 70 ERVVGHGSFGVVFQAKCLETGE---AVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 121
++VVG G FG V + + +VAIK + K R E M DHPN++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAY 181
L+ T K + + +E ++ ++ H + +I + I + Y
Sbjct: 110 RLEGVV--TKSKPVMIVTEXMEN--GSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKY 162
Query: 182 IHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 236
+ + +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y + +P
Sbjct: 163 LSD-MGAVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSP 219
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELL 262
E I ++T+A D+WS G VL E++
Sbjct: 220 EAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 100/222 (45%), Gaps = 40/222 (18%)
Query: 70 ERVVGHGSFGVVFQAKCLETGEAVAIKK-VLQDKRYK----------NRELQTMRLLDHP 118
E+ +G G FG+V + + ++ VAIK +L D + RE+ M L+HP
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 119 NVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIK--HHYKMSQRMPLIYVKLYFYQ 174
N+V L + +V+E+VP + HR++ H K S ++ L+
Sbjct: 84 NIVKLYGLMHNPP-------RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLM------LD 130
Query: 175 ICRALAYIHN-TIGVCHRDIKPQNLLVNPHTHQLKLC----DFGSAKVLVKGEPNISYIC 229
I + Y+ N + HRD++ N+ + +C DFG ++ V ++S +
Sbjct: 131 IALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVH---SVSGLL 187
Query: 230 SRY-YRAPELIFGATE--YTAAIDIWSAGCVLAELLLGQPLF 268
+ + APE I GA E YT D +S +L +L G+ F
Sbjct: 188 GNFQWMAPETI-GAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 18/200 (9%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKV-----LQDKRYKNRELQTMRLLDHPNVVSLKHCF 127
+G GSFG VF+ T + VAIK + + +E+ + D V +
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGSY 90
Query: 128 FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIG 187
++ L +++EY+ + + + +I + L Y+H+
Sbjct: 91 LKGSK-----LWIIMEYLGGGSALDLLRAGPFDE----FQIATMLKEILKGLDYLHSEKK 141
Query: 188 VCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGE-PNISYICSRYYRAPELIFGATEYT 246
+ HRDIK N+L++ +KL DFG A L + +++ + ++ APE+I + Y
Sbjct: 142 I-HRDIKAANVLLSEQG-DVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI-QQSAYD 198
Query: 247 AAIDIWSAGCVLAELLLGQP 266
+ DIWS G EL G+P
Sbjct: 199 SKADIWSLGITAIELAKGEP 218
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 7/102 (6%)
Query: 175 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISYIC-SR 231
I A+ ++H+ + HRD+KP+NLL LKL DFG AK + + C +
Sbjct: 118 IGTAIQFLHSH-NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA--LQTPCYTP 174
Query: 232 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESG 273
YY APE + G +Y + D+WS G ++ LL G P F +G
Sbjct: 175 YYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTG 215
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 15/176 (8%)
Query: 163 MPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGE 222
+ L ++ Y +Q+ + + ++ + + HRD+ +N+L++ + +K+CDFG A+ + K
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASRKCI-HRDLAARNILLS-EKNVVKICDFGLARDIYKDP 254
Query: 223 PNISYICSRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLV 278
+ +R + APE IF YT D+WS G +L E+ LG +PG V
Sbjct: 255 DYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------V 306
Query: 279 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH-KIFQKRMPPEAVDLVSRLLQ 333
+I + +E + P+YT + Q WH + Q+ E V+ + LLQ
Sbjct: 307 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 362
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 7/102 (6%)
Query: 175 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISYIC-SR 231
I A+ ++H+ + HRD+KP+NLL LKL DFG AK + + C +
Sbjct: 137 IGTAIQFLHSH-NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA--LQTPCYTP 193
Query: 232 YYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESG 273
YY APE + G +Y + D+WS G ++ LL G P F +G
Sbjct: 194 YYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTG 234
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 15/176 (8%)
Query: 163 MPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGE 222
+ L ++ Y +Q+ + + ++ + + HRD+ +N+L++ + +K+CDFG A+ + K
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASRKCI-HRDLAARNILLS-EKNVVKICDFGLARDIYKDP 245
Query: 223 PNISYICSRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLV 278
+ +R + APE IF YT D+WS G +L E+ LG +PG V
Sbjct: 246 DYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------V 297
Query: 279 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH-KIFQKRMPPEAVDLVSRLLQ 333
+I + +E + P+YT + Q WH + Q+ E V+ + LLQ
Sbjct: 298 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 353
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 15/176 (8%)
Query: 163 MPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGE 222
+ L ++ Y +Q+ + + ++ + + HRD+ +N+L++ + +K+CDFG A+ + K
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCI-HRDLAARNILLS-EKNVVKICDFGLARDIXKDP 193
Query: 223 PNISYICSRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLV 278
+ +R + APE IF YT D+WS G +L E+ LG +PG V
Sbjct: 194 DXVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------V 245
Query: 279 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH-KIFQKRMPPEAVDLVSRLLQ 333
+I + +E + P+YT + Q WH + Q+ E V+ + LLQ
Sbjct: 246 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 301
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 15/176 (8%)
Query: 163 MPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGE 222
+ L ++ Y +Q+ + + ++ + + HRD+ +N+L++ + +K+CDFG A+ + K
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASRKCI-HRDLAARNILLS-EKNVVKICDFGLARDIYKDP 252
Query: 223 PNISYICSRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLV 278
+ +R + APE IF YT D+WS G +L E+ LG +PG V
Sbjct: 253 DYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------V 304
Query: 279 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH-KIFQKRMPPEAVDLVSRLLQ 333
+I + +E + P+YT + Q WH + Q+ E V+ + LLQ
Sbjct: 305 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 360
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 15/176 (8%)
Query: 163 MPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGE 222
+ L ++ Y +Q+ + + ++ + + HRD+ +N+L++ + +K+CDFG A+ + K
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCI-HRDLAARNILLS-EKNVVKICDFGLARDIXKDP 193
Query: 223 PNISYICSRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLV 278
+ +R + APE IF YT D+WS G +L E+ LG +PG V
Sbjct: 194 DXVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------V 245
Query: 279 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH-KIFQKRMPPEAVDLVSRLLQ 333
+I + +E + P+YT + Q WH + Q+ E V+ + LLQ
Sbjct: 246 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 301
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 100/225 (44%), Gaps = 25/225 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIK--KVLQDKRYKN--------RELQTMRLLDHPNVVS 122
+G G F +V + + TG A K K Q + + RE+ +R + HPN+++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 123 LKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAY 181
L + + T+ + L+LE V + + +S+ ++K QI + Y
Sbjct: 80 LHDVYENRTD-----VVLILELVSGGELFDFLAQKESLSEEEATSFIK----QILDGVNY 130
Query: 182 IHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 238
+H T + H D+KP+N+++ N +KL DFG A + G + + + APE+
Sbjct: 131 LH-TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI 189
Query: 239 IFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKV 283
+ D+WS G + LL G F G++ + L I V
Sbjct: 190 V-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAV 233
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 96/206 (46%), Gaps = 24/206 (11%)
Query: 70 ERVVGHGSFGVVFQAKCLETGE---AVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 121
++VVG G FG V + + +VAIK + K R E M DHPN++
Sbjct: 21 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 80
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAY 181
L+ T K + + +E ++ ++ H + +I + I + Y
Sbjct: 81 RLEGVV--TKSKPVMIVTEXME--NGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKY 133
Query: 182 IHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 236
+ + +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y + +P
Sbjct: 134 LSD-MGYVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSP 190
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELL 262
E I ++T+A D+WS G VL E++
Sbjct: 191 EAI-AYRKFTSASDVWSYGIVLWEVM 215
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 15/176 (8%)
Query: 163 MPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGE 222
+ L ++ Y +Q+ + + ++ + + HRD+ +N+L++ + +K+CDFG A+ + K
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCI-HRDLAARNILLS-EKNVVKICDFGLARDIXKDP 202
Query: 223 PNISYICSRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLV 278
+ +R + APE IF YT D+WS G +L E+ LG +PG V
Sbjct: 203 DXVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------V 254
Query: 279 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH-KIFQKRMPPEAVDLVSRLLQ 333
+I + +E + P+YT + Q WH + Q+ E V+ + LLQ
Sbjct: 255 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 15/176 (8%)
Query: 163 MPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGE 222
+ L ++ Y +Q+ + + ++ + + HRD+ +N+L++ + +K+CDFG A+ + K
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCI-HRDLAARNILLS-EKNVVKICDFGLARDIXKDP 202
Query: 223 PNISYICSRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLV 278
+ +R + APE IF YT D+WS G +L E+ LG +PG V
Sbjct: 203 DXVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------V 254
Query: 279 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH-KIFQKRMPPEAVDLVSRLLQ 333
+I + +E + P+YT + Q WH + Q+ E V+ + LLQ
Sbjct: 255 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 15/176 (8%)
Query: 163 MPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGE 222
+ L ++ Y +Q+ + + ++ + + HRD+ +N+L++ + +K+CDFG A+ + K
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASRKCI-HRDLAARNILLS-EKNVVKICDFGLARDIYKDP 247
Query: 223 PNISYICSRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLV 278
+ +R + APE IF YT D+WS G +L E+ LG +PG V
Sbjct: 248 DYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------V 299
Query: 279 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH-KIFQKRMPPEAVDLVSRLLQ 333
+I + +E + P+YT + Q WH + Q+ E V+ + LLQ
Sbjct: 300 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 355
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 129/286 (45%), Gaps = 39/286 (13%)
Query: 73 VGHGSFGVVFQAKCL-----ETGEAVAIKKVLQDKRY-KNRELQT-MRLL----DHPNVV 121
+G G+FG V +A T VA+K + + + ++R L + +++L H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 122 SLKHCFFSTTEKDELYLNLVLE---------YVPETVHRVIKHHYKMSQRMPLIYVKLYF 172
+L K L +++E Y+ + + + + L ++ Y
Sbjct: 95 NL----LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYS 150
Query: 173 YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY 232
+Q+ + + ++ + + HRD+ +N+L++ + +K+CDFG A+ + K + +R
Sbjct: 151 FQVAKGMEFLASRKXI-HRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARL 208
Query: 233 ---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLVEIIKVLGTPT 288
+ APE IF YT D+WS G +L E+ LG +PG V+I +
Sbjct: 209 PLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCRRL 260
Query: 289 REEIKCMNPNYTEFKFPQIKAHPWH-KIFQKRMPPEAVDLVSRLLQ 333
+E + P+YT + Q WH + Q+ E V+ + LLQ
Sbjct: 261 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 306
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 15/176 (8%)
Query: 163 MPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGE 222
+ L ++ Y +Q+ + + ++ + + HRD+ +N+L++ + +K+CDFG A+ + K
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCI-HRDLAARNILLS-EKNVVKICDFGLARDIYKDP 202
Query: 223 PNISYICSRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLV 278
+ +R + APE IF YT D+WS G +L E+ LG +PG V
Sbjct: 203 DXVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------V 254
Query: 279 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH-KIFQKRMPPEAVDLVSRLLQ 333
+I + +E + P+YT + Q WH + Q+ E V+ + LLQ
Sbjct: 255 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 96/206 (46%), Gaps = 24/206 (11%)
Query: 70 ERVVGHGSFGVVFQAKCLETGE---AVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 121
++VVG G FG V + + +VAIK + K R E M DHPN++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAY 181
L+ T K + + +E ++ ++ H + +I + I + Y
Sbjct: 110 RLEGVV--TKSKPVMIVTEXMEN--GSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKY 162
Query: 182 IHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 236
+ + +G HRD+ +N+L+N + K+ DFG ++VL + +P +Y + +P
Sbjct: 163 LSD-MGYVHRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSP 219
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELL 262
E I ++T+A D+WS G VL E++
Sbjct: 220 EAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 15/168 (8%)
Query: 171 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 230
Y +Q+ + + ++ + + HRD+ +N+L++ + +K+CDFG A+ + K + +
Sbjct: 190 YSFQVAKGMEFLASRKCI-HRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDA 247
Query: 231 RY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLVEIIKVLGT 286
R + APE IF YT D+WS G +L E+ LG +PG V+I +
Sbjct: 248 RLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFCR 299
Query: 287 PTREEIKCMNPNYTEFKFPQIKAHPWH-KIFQKRMPPEAVDLVSRLLQ 333
+E + P+YT + Q WH + Q+ E V+ + LLQ
Sbjct: 300 RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 347
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 15/176 (8%)
Query: 163 MPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGE 222
+ L ++ Y +Q+ + + ++ + + HRD+ +N+L++ + +K+CDFG A+ + K
Sbjct: 147 LTLEHLICYSFQVAKGMEFLASRKCI-HRDLAARNILLS-EKNVVKICDFGLARDIYKDP 204
Query: 223 PNISYICSRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLV 278
+ +R + APE IF YT D+WS G +L E+ LG +PG V
Sbjct: 205 DYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------V 256
Query: 279 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH-KIFQKRMPPEAVDLVSRLLQ 333
+I + +E + P+YT + Q WH + Q+ E V+ + LLQ
Sbjct: 257 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 312
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 15/176 (8%)
Query: 163 MPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGE 222
+ L ++ Y +Q+ + + ++ + + HRD+ +N+L++ + +K+CDFG A+ + K
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCI-HRDLAARNILLS-EKNVVKICDFGLARDIYKDP 193
Query: 223 PNISYICSRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLV 278
+ +R + APE IF YT D+WS G +L E+ LG +PG V
Sbjct: 194 DYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------V 245
Query: 279 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH-KIFQKRMPPEAVDLVSRLLQ 333
+I + +E + P+YT + Q WH + Q+ E V+ + LLQ
Sbjct: 246 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 301
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 15/176 (8%)
Query: 163 MPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGE 222
+ L ++ Y +Q+ + + ++ + + HRD+ +N+L++ + +K+CDFG A+ + K
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCI-HRDLAARNILLS-EKNVVKICDFGLARDIYKDP 193
Query: 223 PNISYICSRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLV 278
+ +R + APE IF YT D+WS G +L E+ LG +PG V
Sbjct: 194 DYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------V 245
Query: 279 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH-KIFQKRMPPEAVDLVSRLLQ 333
+I + +E + P+YT + Q WH + Q+ E V+ + LLQ
Sbjct: 246 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 301
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 15/176 (8%)
Query: 163 MPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGE 222
+ L ++ Y +Q+ + + ++ + + HRD+ +N+L++ + +K+CDFG A+ + K
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCI-HRDLAARNILLS-EKNVVKICDFGLARDIYKDP 202
Query: 223 PNISYICSRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLV 278
+ +R + APE IF YT D+WS G +L E+ LG +PG V
Sbjct: 203 DYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------V 254
Query: 279 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH-KIFQKRMPPEAVDLVSRLLQ 333
+I + +E + P+YT + Q WH + Q+ E V+ + LLQ
Sbjct: 255 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 129/289 (44%), Gaps = 36/289 (12%)
Query: 70 ERVVGHGSFGVVFQAKCLETGE---AVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 121
E+++G G G V + G+ VAIK + + R E M DHPN++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
L+ + L + +V EY+ ++ ++ H M L+ + + +
Sbjct: 114 RLE----GVVTRGRLAM-IVTEYMENGSLDTFLRTHDGQFTIMQLVGM---LRGVGAGMR 165
Query: 181 YIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-----YYRA 235
Y+ + +G HRD+ +N+LV+ + K+ DFG ++VL + +P+ +Y + + A
Sbjct: 166 YLSD-LGYVHRDLAARNVLVDSNL-VCKVSDFGLSRVL-EDDPDAAYTTTGGKIPIRWTA 222
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 294
PE I T +++A D+WS G V+ E+L G+ + + D + + E +
Sbjct: 223 PEAIAFRT-FSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV--------EEGYRL 273
Query: 295 MNPNYTEFKFPQIKAHPWHKIFQKRMP-PEAVDLVSRLLQYSPNLRSTA 342
P Q+ WHK +R + V ++ L++ +LR+TA
Sbjct: 274 PAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPESLRATA 322
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 24/206 (11%)
Query: 70 ERVVGHGSFGVVFQAKCLETGE---AVAIKKV---LQDKRYKN--RELQTMRLLDHPNVV 121
E+V+G G FG V + G+ VAIK + DK+ ++ E M DHPN++
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAY 181
L+ + ++ EY+ K R +I + I + Y
Sbjct: 79 HLEGVVTKCKP-----VMIITEYMENGSLDAFLR--KNDGRFTVIQLVGMLRGIGSGMKY 131
Query: 182 IHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 236
+ + + HRD+ +N+LVN + K+ DFG ++VL + +P +Y + AP
Sbjct: 132 LSD-MSYVHRDLAARNILVNSNL-VCKVSDFGMSRVL-EDDPEAAYTTRGGKIPIRWTAP 188
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELL 262
E I ++T+A D+WS G V+ E++
Sbjct: 189 EAI-AYRKFTSASDVWSYGIVMWEVM 213
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 24/206 (11%)
Query: 70 ERVVGHGSFGVVFQAKCLETGE---AVAIKKV---LQDKRYKN--RELQTMRLLDHPNVV 121
E+V+G G FG V + G+ VAIK + DK+ ++ E M DHPN++
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAY 181
L+ + ++ EY+ K R +I + I + Y
Sbjct: 73 HLEGVVTKCKP-----VMIITEYMENGSLDAFLR--KNDGRFTVIQLVGMLRGIGSGMKY 125
Query: 182 IHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-----YYRAP 236
+ + + HRD+ +N+LVN + K+ DFG ++VL + +P +Y + AP
Sbjct: 126 LSD-MSYVHRDLAARNILVNSNL-VCKVSDFGMSRVL-EDDPEAAYTTRGGKIPIRWTAP 182
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELL 262
E I ++T+A D+WS G V+ E++
Sbjct: 183 EAI-AYRKFTSASDVWSYGIVMWEVM 207
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 100/207 (48%), Gaps = 29/207 (14%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIK---KVLQDKRYKNR------ELQTMRLLDHPNVV 121
+V+G G FG V + + GE++ I KV++DK + + + LDH ++V
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRAL 179
L ++ L LV +Y+P + V +H + ++ L + QI + +
Sbjct: 97 RLLGLCPGSS------LQLVTQYLPLGSLLDHVRQHRGALGPQLLLN----WGVQIAKGM 146
Query: 180 AYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY---YRAP 236
Y+ G+ HR++ +N+L+ + Q+++ DFG A +L + + Y ++ + A
Sbjct: 147 YYLEEH-GMVHRNLAARNVLLKSPS-QVQVADFGVADLLPPDDKQLLYSEAKTPIKWMAL 204
Query: 237 ELI-FGATEYTAAIDIWSAGCVLAELL 262
E I FG +YT D+WS G + EL+
Sbjct: 205 ESIHFG--KYTHQSDVWSYGVTVWELM 229
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 100/207 (48%), Gaps = 29/207 (14%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIK---KVLQDKRYKNR------ELQTMRLLDHPNVV 121
+V+G G FG V + + GE++ I KV++DK + + + LDH ++V
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRAL 179
L ++ L LV +Y+P + V +H + ++ L + QI + +
Sbjct: 79 RLLGLCPGSS------LQLVTQYLPLGSLLDHVRQHRGALGPQLLLN----WGVQIAKGM 128
Query: 180 AYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY---YRAP 236
Y+ G+ HR++ +N+L+ + Q+++ DFG A +L + + Y ++ + A
Sbjct: 129 YYLEEH-GMVHRNLAARNVLLKSPS-QVQVADFGVADLLPPDDKQLLYSEAKTPIKWMAL 186
Query: 237 ELI-FGATEYTAAIDIWSAGCVLAELL 262
E I FG +YT D+WS G + EL+
Sbjct: 187 ESIHFG--KYTHQSDVWSYGVTVWELM 211
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 103/226 (45%), Gaps = 27/226 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN-----------RELQTMRLLDHPNVV 121
+G G F VV + + TG A K ++ +R K+ RE+ ++ + HPNV+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVP-ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
+L + + T+ + L+ E V + + +++ ++K QI +
Sbjct: 78 TLHEVYENKTD-----VILIGELVAGGELFDFLAEKESLTEEEATEFLK----QILNGVY 128
Query: 181 YIHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPE 237
Y+H ++ + H D+KP+N+++ N ++K+ DFG A + G + + + APE
Sbjct: 129 YLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 238 LIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKV 283
++ D+WS G + LL G F G++ + L + V
Sbjct: 188 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 99/222 (44%), Gaps = 40/222 (18%)
Query: 70 ERVVGHGSFGVVFQAKCLETGEAVAIKK-VLQDKRYK----------NRELQTMRLLDHP 118
E+ +G G FG+V + + ++ VAIK +L D + RE+ M L+HP
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 119 NVVSLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIK--HHYKMSQRMPLIYVKLYFYQ 174
N+V L + +V+E+VP + HR++ H K S ++ L+
Sbjct: 84 NIVKLYGLMHNPP-------RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLM------LD 130
Query: 175 ICRALAYIHN-TIGVCHRDIKPQNLLVNPHTHQLKLC----DFGSAKVLVKGEPNISYIC 229
I + Y+ N + HRD++ N+ + +C DF ++ V ++S +
Sbjct: 131 IALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVH---SVSGLL 187
Query: 230 SRY-YRAPELIFGATE--YTAAIDIWSAGCVLAELLLGQPLF 268
+ + APE I GA E YT D +S +L +L G+ F
Sbjct: 188 GNFQWMAPETI-GAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 92/204 (45%), Gaps = 23/204 (11%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIK---KVLQDKRYKNRELQ------TMRLLDHPNVV 121
+V+G G+FG V++ + GE V I K+L + ++ M +DHP++V
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAY 181
L S T + LV + +P H +K + L+ + QI + + Y
Sbjct: 104 RLLGVCLSPT------IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLN--WCVQIAKGMMY 155
Query: 182 IHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY---YRAPEL 238
+ + HRD+ +N+LV H +K+ DFG A++L E + + + A E
Sbjct: 156 LEER-RLVHRDLAARNVLVKSPNH-VKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 213
Query: 239 IFGATEYTAAIDIWSAGCVLAELL 262
I ++T D+WS G + EL+
Sbjct: 214 IH-YRKFTHQSDVWSYGVTIWELM 236
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 25/225 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIK--KVLQDKRYK--------NRELQTMRLLDHPNVVS 122
+G G F +V + + TG A K K Q + + RE+ +R + H NV++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 123 LKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAY 181
L + + T+ + L+LE V + + +S+ ++K QI + Y
Sbjct: 80 LHDVYENRTD-----VVLILELVSGGELFDFLAQKESLSEEEATSFIK----QILDGVNY 130
Query: 182 IHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 238
+H T + H D+KP+N+++ N +KL DFG A + G + + + APE+
Sbjct: 131 LH-TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI 189
Query: 239 IFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKV 283
+ D+WS G + LL G F G++ + L I V
Sbjct: 190 V-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV 233
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 25/210 (11%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIK---KVLQDKRYKNRELQ------TMRLLDHPNVV 121
+V+G G+FG V++ + GE V I K+L + ++ M +DHP++V
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAY 181
L S T + LV + +P H +K + L+ + QI + + Y
Sbjct: 81 RLLGVCLSPT------IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLN--WCVQIAKGMMY 132
Query: 182 IHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY---YRAPEL 238
+ + HRD+ +N+LV H +K+ DFG A++L E + + + A E
Sbjct: 133 LEER-RLVHRDLAARNVLVKSPNH-VKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 190
Query: 239 IFGATEYTAAIDIWSAGCVLAELLL--GQP 266
I ++T D+WS G + EL+ G+P
Sbjct: 191 IH-YRKFTHQSDVWSYGVTIWELMTFGGKP 219
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 96/206 (46%), Gaps = 27/206 (13%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 121
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKHHYKMSQRMPLIYVKLYFYQICRAL 179
L ++T + L+++ +P + V +H + + Y+ + QI + +
Sbjct: 82 RLLGICLTST------VQLIMQLMPFGXLLDYVREHKDNIGSQ----YLLNWCVQIAKGM 131
Query: 180 AYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY---YRAP 236
Y+ + + HRD+ +N+LV H +K+ DFG AK+L E + + A
Sbjct: 132 NYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 189
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELL 262
E I YT D+WS G + EL+
Sbjct: 190 ESILHRI-YTHQSDVWSYGVTVWELM 214
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 25/225 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIK--KVLQDKRYK--------NRELQTMRLLDHPNVVS 122
+G G F +V + + TG A K K Q + + RE+ +R + H NV++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 123 LKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAY 181
L + + T+ + L+LE V + + +S+ ++K QI + Y
Sbjct: 80 LHDVYENRTD-----VVLILELVSGGELFDFLAQKESLSEEEATSFIK----QILDGVNY 130
Query: 182 IHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 238
+H T + H D+KP+N+++ N +KL DFG A + G + + + APE+
Sbjct: 131 LH-TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI 189
Query: 239 IFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKV 283
+ D+WS G + LL G F G++ + L I V
Sbjct: 190 V-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV 233
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 121
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 122 SLKH-CFFSTTE--KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRA 178
L C ST + + +L+YV E H + + Y+ + QI +
Sbjct: 88 RLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YLLNWCVQIAKG 136
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY---YRA 235
+ Y+ + + HRD+ +N+LV H +K+ DFG AK+L E + + A
Sbjct: 137 MNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELL 262
E I YT D+WS G + EL+
Sbjct: 195 LESILHRI-YTHQSDVWSYGVTVWELM 220
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 25/225 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIK--KVLQDKRYK--------NRELQTMRLLDHPNVVS 122
+G G F +V + + TG A K K Q + + RE+ +R + H NV++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 123 LKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAY 181
L + + T+ + L+LE V + + +S+ ++K QI + Y
Sbjct: 80 LHDVYENRTD-----VVLILELVSGGELFDFLAQKESLSEEEATSFIK----QILDGVNY 130
Query: 182 IHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 238
+H T + H D+KP+N+++ N +KL DFG A + G + + + APE+
Sbjct: 131 LH-TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI 189
Query: 239 IFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKV 283
+ D+WS G + LL G F G++ + L I V
Sbjct: 190 V-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV 233
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 121
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 122 SLKH-CFFSTTE--KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRA 178
L C ST + + +L+YV E H + + Y+ + QI +
Sbjct: 81 RLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YLLNWCVQIAKG 129
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY---YRA 235
+ Y+ + + HRD+ +N+LV H +K+ DFG AK+L E + + A
Sbjct: 130 MNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELL 262
E I YT D+WS G + EL+
Sbjct: 188 LESILHRI-YTHQSDVWSYGVTVWELM 213
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 25/225 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIK--KVLQDKRYK--------NRELQTMRLLDHPNVVS 122
+G G F +V + + TG A K K Q + + RE+ +R + H NV++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 123 LKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAY 181
L + + T+ + L+LE V + + +S+ ++K QI + Y
Sbjct: 80 LHDVYENRTD-----VVLILELVSGGELFDFLAQKESLSEEEATSFIK----QILDGVNY 130
Query: 182 IHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 238
+H T + H D+KP+N+++ N +KL DFG A + G + + + APE+
Sbjct: 131 LH-TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI 189
Query: 239 IFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKV 283
+ D+WS G + LL G F G++ + L I V
Sbjct: 190 V-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAV 233
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 96/206 (46%), Gaps = 27/206 (13%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 121
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPE--TVHRVIKHHYKMSQRMPLIYVKLYFYQICRAL 179
L ++T + L+++ +P + V +H + + Y+ + QI + +
Sbjct: 83 RLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQ----YLLNWCVQIAKGM 132
Query: 180 AYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY---YRAP 236
Y+ + + HRD+ +N+LV H +K+ DFG AK+L E + + A
Sbjct: 133 NYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELL 262
E I YT D+WS G + EL+
Sbjct: 191 ESILHRI-YTHQSDVWSYGVTVWELM 215
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 96/206 (46%), Gaps = 27/206 (13%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 121
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPE--TVHRVIKHHYKMSQRMPLIYVKLYFYQICRAL 179
L ++T + L+++ +P + V +H + + Y+ + QI + +
Sbjct: 83 RLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQ----YLLNWCVQIAKGM 132
Query: 180 AYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY---YRAP 236
Y+ + + HRD+ +N+LV H +K+ DFG AK+L E + + A
Sbjct: 133 NYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELL 262
E I YT D+WS G + EL+
Sbjct: 191 ESILHRI-YTHQSDVWSYGVTVWELM 215
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 121
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 122 SLKH-CFFSTTE--KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRA 178
L C ST + + +L+YV E H + + Y+ + QI +
Sbjct: 83 RLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YLLNWCVQIAKG 131
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY---YRA 235
+ Y+ + + HRD+ +N+LV H +K+ DFG AK+L E + + A
Sbjct: 132 MNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELL 262
E I YT D+WS G + EL+
Sbjct: 190 LESILHRI-YTHQSDVWSYGVTVWELM 215
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 25/225 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIK--KVLQDKRYK--------NRELQTMRLLDHPNVVS 122
+G G F +V + + TG A K K Q + + RE+ +R + H NV++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 123 LKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAY 181
L + + T+ + L+LE V + + +S+ ++K QI + Y
Sbjct: 80 LHDVYENRTD-----VVLILELVSGGELFDFLAQKESLSEEEATSFIK----QILDGVNY 130
Query: 182 IHNTIGVCHRDIKPQNLLV---NPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 238
+H T + H D+KP+N+++ N +KL DFG A + G + + + APE+
Sbjct: 131 LH-TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI 189
Query: 239 IFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKV 283
+ D+WS G + LL G F G++ + L I V
Sbjct: 190 V-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAV 233
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 96/206 (46%), Gaps = 27/206 (13%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 121
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPE--TVHRVIKHHYKMSQRMPLIYVKLYFYQICRAL 179
L ++T + L+++ +P + V +H + + Y+ + QI + +
Sbjct: 85 RLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQ----YLLNWCVQIAKGM 134
Query: 180 AYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY---YRAP 236
Y+ + + HRD+ +N+LV H +K+ DFG AK+L E + + A
Sbjct: 135 NYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 192
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELL 262
E I YT D+WS G + EL+
Sbjct: 193 ESILHRI-YTHQSDVWSYGVTVWELM 217
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 107/222 (48%), Gaps = 28/222 (12%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKV-------LQDKRYKNRELQTMRLLDHPNVVSLKH 125
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N++
Sbjct: 20 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 71
Query: 126 CFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQ-RMPLIYVKLYFYQICRALAYIHN 184
F + K +L + V ++ + + HH S+ + + + Q R + Y+H
Sbjct: 72 LFMGYSTKPQLAI--VTQWCEGSS---LYHHLHASETKFEMKKLIDIARQTARGMDYLHA 126
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIF- 240
+ HRD+K N+ ++ + +K+ DFG A V + + + S + APE+I
Sbjct: 127 K-SIIHRDLKSNNIFLH-EDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 184
Query: 241 -GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 281
+ Y+ D+++ G VL EL+ GQ + + DQ++E++
Sbjct: 185 QDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 226
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 121
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 122 SLKH-CFFSTTE--KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRA 178
L C ST + + +L+YV E H + + Y+ + QI +
Sbjct: 81 RLLGICLTSTVQLITQLMPFGXLLDYVRE-------HKDNIGSQ----YLLNWCVQIAKG 129
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY---YRA 235
+ Y+ + + HRD+ +N+LV H +K+ DFG AK+L E + + A
Sbjct: 130 MNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELL 262
E I YT D+WS G + EL+
Sbjct: 188 LESILHRI-YTHQSDVWSYGVTVWELM 213
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 121
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 122 SLKH-CFFSTTE--KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRA 178
L C ST + + +L+YV E H + + Y+ + QI +
Sbjct: 84 RLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YLLNWCVQIAKG 132
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY---YRA 235
+ Y+ + + HRD+ +N+LV H +K+ DFG AK+L E + + A
Sbjct: 133 MNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELL 262
E I YT D+WS G + EL+
Sbjct: 191 LESILHRI-YTHQSDVWSYGVTVWELM 216
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 96/206 (46%), Gaps = 27/206 (13%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 121
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPE--TVHRVIKHHYKMSQRMPLIYVKLYFYQICRAL 179
L ++T + L+++ +P + V +H + + Y+ + QI + +
Sbjct: 84 RLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQ----YLLNWCVQIAKGM 133
Query: 180 AYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY---YRAP 236
Y+ + + HRD+ +N+LV H +K+ DFG AK+L E + + A
Sbjct: 134 NYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 191
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELL 262
E I YT D+WS G + EL+
Sbjct: 192 ESILHRI-YTHQSDVWSYGVTVWELM 216
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 121
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 122 SLKH-CFFSTTE--KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRA 178
L C ST + + +L+YV E H + + Y+ + QI +
Sbjct: 88 RLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YLLNWCVQIAKG 136
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY---YRA 235
+ Y+ + + HRD+ +N+LV H +K+ DFG AK+L E + + A
Sbjct: 137 MNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELL 262
E I YT D+WS G + EL+
Sbjct: 195 LESILHRI-YTHQSDVWSYGVTVWELM 220
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 121
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 46 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 105
Query: 122 SLKH-CFFSTTE--KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRA 178
L C ST + + +L+YV E H + + Y+ + QI +
Sbjct: 106 RLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YLLNWCVQIAKG 154
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY---YRA 235
+ Y+ + + HRD+ +N+LV H +K+ DFG AK+L E + + A
Sbjct: 155 MNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 212
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELL 262
E I YT D+WS G + EL+
Sbjct: 213 LESILHRI-YTHQSDVWSYGVTVWELM 238
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 121
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 122 SLKH-CFFSTTE--KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRA 178
L C ST + + +L+YV E H + + Y+ + QI +
Sbjct: 84 RLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YLLNWCVQIAKG 132
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY---YRA 235
+ Y+ + + HRD+ +N+LV H +K+ DFG AK+L E + + A
Sbjct: 133 MNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELL 262
E I YT D+WS G + EL+
Sbjct: 191 LESILHRI-YTHQSDVWSYGVTVWELM 216
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 96/206 (46%), Gaps = 27/206 (13%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 121
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPE--TVHRVIKHHYKMSQRMPLIYVKLYFYQICRAL 179
L ++T + L+++ +P + V +H + + Y+ + QI + +
Sbjct: 85 RLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQ----YLLNWCVQIAKGM 134
Query: 180 AYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY---YRAP 236
Y+ + + HRD+ +N+LV H +K+ DFG AK+L E + + A
Sbjct: 135 NYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 192
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELL 262
E I YT D+WS G + EL+
Sbjct: 193 ESILHRI-YTHQSDVWSYGVTVWELM 217
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 121
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 122 SLKH-CFFSTTE--KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRA 178
L C ST + + +L+YV E H + + Y+ + QI +
Sbjct: 83 RLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YLLNWCVQIAKG 131
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY---YRA 235
+ Y+ + + HRD+ +N+LV H +K+ DFG AK+L E + + A
Sbjct: 132 MNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELL 262
E I YT D+WS G + EL+
Sbjct: 190 LESILHRI-YTHQSDVWSYGVTVWELM 215
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 96/206 (46%), Gaps = 27/206 (13%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 121
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPE--TVHRVIKHHYKMSQRMPLIYVKLYFYQICRAL 179
L ++T + L+++ +P + V +H + + Y+ + QI + +
Sbjct: 83 RLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQ----YLLNWCVQIAKGM 132
Query: 180 AYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY---YRAP 236
Y+ + + HRD+ +N+LV H +K+ DFG AK+L E + + A
Sbjct: 133 NYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELL 262
E I YT D+WS G + EL+
Sbjct: 191 ESILHRI-YTHQSDVWSYGVTVWELM 215
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 121
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 122 SLKH-CFFSTTE--KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRA 178
L C ST + + +L+YV E H + + Y+ + QI +
Sbjct: 84 RLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YLLNWCVQIAKG 132
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY---YRA 235
+ Y+ + + HRD+ +N+LV H +K+ DFG AK+L E + + A
Sbjct: 133 MNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELL 262
E I YT D+WS G + EL+
Sbjct: 191 LESILHRI-YTHQSDVWSYGVTVWELM 216
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 96/206 (46%), Gaps = 27/206 (13%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 121
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPE--TVHRVIKHHYKMSQRMPLIYVKLYFYQICRAL 179
L ++T + L+++ +P + V +H + + Y+ + QI + +
Sbjct: 81 RLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQ----YLLNWCVQIAKGM 130
Query: 180 AYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY---YRAP 236
Y+ + + HRD+ +N+LV H +K+ DFG AK+L E + + A
Sbjct: 131 NYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELL 262
E I YT D+WS G + EL+
Sbjct: 189 ESILHRI-YTHQSDVWSYGVTVWELM 213
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 121
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 27 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 86
Query: 122 SLKH-CFFSTTE--KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRA 178
L C ST + + +L+YV E H + + Y+ + QI +
Sbjct: 87 RLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YLLNWCVQIAKG 135
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY---YRA 235
+ Y+ + + HRD+ +N+LV H +K+ DFG AK+L E + + A
Sbjct: 136 MNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 193
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELL 262
E I YT D+WS G + EL+
Sbjct: 194 LESILHRI-YTHQSDVWSYGVTVWELM 219
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 96/206 (46%), Gaps = 27/206 (13%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 121
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPE--TVHRVIKHHYKMSQRMPLIYVKLYFYQICRAL 179
L ++T + L+++ +P + V +H + + Y+ + QI + +
Sbjct: 82 RLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQ----YLLNWCVQIAKGM 131
Query: 180 AYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY---YRAP 236
Y+ + + HRD+ +N+LV H +K+ DFG AK+L E + + A
Sbjct: 132 NYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 189
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELL 262
E I YT D+WS G + EL+
Sbjct: 190 ESILHRI-YTHQSDVWSYGVTVWELM 214
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 15/168 (8%)
Query: 171 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 230
Y +Q+ + + ++ + + HRD+ +N+L++ + +K+ DFG A+ + K + +
Sbjct: 149 YSFQVAKGMEFLASRKXI-HRDLAARNILLS-EKNVVKIXDFGLARDIYKDPDYVRKGDA 206
Query: 231 RY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLVEIIKVLGT 286
R + APE IF YT D+WS G +L E+ LG +PG V+I +
Sbjct: 207 RLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFXR 258
Query: 287 PTREEIKCMNPNYTEFKFPQIKAHPWH-KIFQKRMPPEAVDLVSRLLQ 333
+E + P+YT + Q WH + Q+ E V+ + LLQ
Sbjct: 259 RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 306
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 121
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 122 SLKH-CFFSTTE--KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRA 178
L C ST + + +L+YV E H + + Y+ + QI +
Sbjct: 81 RLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YLLNWCVQIAKG 129
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY---YRA 235
+ Y+ + + HRD+ +N+LV H +K+ DFG AK+L E + + A
Sbjct: 130 MNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELL 262
E I YT D+WS G + EL+
Sbjct: 188 LESILHRI-YTHQSDVWSYGVTVWELM 213
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 121
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 122 SLKH-CFFSTTE--KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRA 178
L C ST + + +L+YV E H + + Y+ + QI +
Sbjct: 81 RLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YLLNWCVQIAKG 129
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY---YRA 235
+ Y+ + + HRD+ +N+LV H +K+ DFG AK+L E + + A
Sbjct: 130 MNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELL 262
E I YT D+WS G + EL+
Sbjct: 188 LESILHRI-YTHQSDVWSYGVTVWELM 213
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 121
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 31 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 90
Query: 122 SLKH-CFFSTTE--KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRA 178
L C ST + + +L+YV E H + + Y+ + QI +
Sbjct: 91 RLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YLLNWCVQIAKG 139
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY---YRA 235
+ Y+ + + HRD+ +N+LV H +K+ DFG AK+L E + + A
Sbjct: 140 MNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 197
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELL 262
E I YT D+WS G + EL+
Sbjct: 198 LESILHRI-YTHQSDVWSYGVTVWELM 223
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 106/222 (47%), Gaps = 28/222 (12%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKV-------LQDKRYKNRELQTMRLLDHPNVVSLKH 125
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N++
Sbjct: 32 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 83
Query: 126 CFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQ-RMPLIYVKLYFYQICRALAYIHN 184
F + K +L + V ++ + + HH S+ + + + Q R + Y+H
Sbjct: 84 LFMGYSTKPQLAI--VTQWCEGSS---LYHHLHASETKFEMKKLIDIARQTARGMDYLHA 138
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSA--KVLVKGEPNISYIC-SRYYRAPELIF- 240
+ HRD+K N+ ++ + +K+ DFG A K G + S + APE+I
Sbjct: 139 K-SIIHRDLKSNNIFLH-EDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRM 196
Query: 241 -GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 281
+ Y+ D+++ G VL EL+ GQ + + DQ++E++
Sbjct: 197 QDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 238
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 128/289 (44%), Gaps = 36/289 (12%)
Query: 70 ERVVGHGSFGVVFQAKCLETGE---AVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 121
E+++G G G V + G+ VAIK + + R E M DHPN++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
L+ + L + +V EY+ ++ ++ H M L+ + + +
Sbjct: 114 RLE----GVVTRGRLAM-IVTEYMENGSLDTFLRTHDGQFTIMQLVGM---LRGVGAGMR 165
Query: 181 YIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-----YYRA 235
Y+ + +G HRD+ +N+LV+ + K+ DFG ++VL + +P+ + + + A
Sbjct: 166 YLSD-LGYVHRDLAARNVLVDSNL-VCKVSDFGLSRVL-EDDPDAAXTTTGGKIPIRWTA 222
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 294
PE I T +++A D+WS G V+ E+L G+ + + D + + E +
Sbjct: 223 PEAIAFRT-FSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV--------EEGYRL 273
Query: 295 MNPNYTEFKFPQIKAHPWHKIFQKRMP-PEAVDLVSRLLQYSPNLRSTA 342
P Q+ WHK +R + V ++ L++ +LR+TA
Sbjct: 274 PAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPESLRATA 322
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 29/211 (13%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN---RELQTMRLLDHPNVVSL------ 123
+G G FG V++ + VA+K + +D +E M+ + HPN+V L
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 124 KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
+ F+ TE Y NL L+Y+ E + + + L+Y+ QI A+ Y+
Sbjct: 79 EPPFYIITEF-MTYGNL-LDYLRECNRQEV-------SAVVLLYMAT---QISSAMEYLE 126
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY---YRAPELIF 240
HRD+ +N LV H +K+ DFG ++ L+ G+ ++ +++ + APE +
Sbjct: 127 KK-NFIHRDLAARNCLVG-ENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESL- 182
Query: 241 GATEYTAAIDIWSAGCVLAEL-LLGQPLFPG 270
+++ D+W+ G +L E+ G +PG
Sbjct: 183 AYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 213
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 17/195 (8%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQ-------TMRLLDHPNVVSLKH 125
+G GSF V++ ET VA + LQD++ E Q ++ L HPN+V
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCE-LQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 126 CFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN- 184
+ ST K + + LV E + +K+ + + ++ + QI + L ++H
Sbjct: 93 SWESTV-KGKKCIVLVTELXTSGTLKTYLKRFKVXK---IKVLRSWCRQILKGLQFLHTR 148
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 244
T + HRD+K N+ + T +K+ D G A L + + I + + APE +
Sbjct: 149 TPPIIHRDLKCDNIFITGPTGSVKIGDLGLA-TLKRASFAKAVIGTPEFXAPEXY--EEK 205
Query: 245 YTAAIDIWSAG-CVL 258
Y ++D+++ G C L
Sbjct: 206 YDESVDVYAFGXCXL 220
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 102/222 (45%), Gaps = 21/222 (9%)
Query: 58 NGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNR-------ELQ 110
QP ++ RV+G G FG VF + TG+ A KK+ + + K + E +
Sbjct: 178 EAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKK 237
Query: 111 TMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIY--- 167
+ + +VSL + F + T+ L LV+ + R H Y + + P
Sbjct: 238 ILAKVHSRFIVSLAYAFETKTD-----LCLVMTIMNGGDIRY--HIYNVDEDNPGFQEPR 290
Query: 168 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI-S 226
Y QI L ++H + +RD+KP+N+L++ + +++ D G A L G+
Sbjct: 291 AIFYTAQIVSGLEHLHQR-NIIYRDLKPENVLLDDDGN-VRISDLGLAVELKAGQTKTKG 348
Query: 227 YICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 268
Y + + APEL+ G EY ++D ++ G L E++ + F
Sbjct: 349 YAGTPGFMAPELLLG-EEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 121
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 74
Query: 122 SLKH-CFFSTTE--KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRA 178
L C ST + + +L+YV E H + + Y+ + QI +
Sbjct: 75 RLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YLLNWCVQIAKG 123
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY---YRA 235
+ Y+ + + HRD+ +N+LV H +K+ DFG AK+L E + + A
Sbjct: 124 MNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 181
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELL 262
E I YT D+WS G + EL+
Sbjct: 182 LESILHRI-YTHQSDVWSYGVTVWELM 207
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 102/222 (45%), Gaps = 21/222 (9%)
Query: 58 NGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNR-------ELQ 110
QP ++ RV+G G FG VF + TG+ A KK+ + + K + E +
Sbjct: 178 EAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKK 237
Query: 111 TMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIY--- 167
+ + +VSL + F + T+ L LV+ + R H Y + + P
Sbjct: 238 ILAKVHSRFIVSLAYAFETKTD-----LCLVMTIMNGGDIRY--HIYNVDEDNPGFQEPR 290
Query: 168 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI-S 226
Y QI L ++H + +RD+KP+N+L++ + +++ D G A L G+
Sbjct: 291 AIFYTAQIVSGLEHLHQR-NIIYRDLKPENVLLDDDGN-VRISDLGLAVELKAGQTKTKG 348
Query: 227 YICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 268
Y + + APEL+ G EY ++D ++ G L E++ + F
Sbjct: 349 YAGTPGFMAPELLLG-EEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 102/222 (45%), Gaps = 21/222 (9%)
Query: 58 NGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNR-------ELQ 110
QP ++ RV+G G FG VF + TG+ A KK+ + + K + E +
Sbjct: 178 EAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKK 237
Query: 111 TMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIY--- 167
+ + +VSL + F + T+ L LV+ + R H Y + + P
Sbjct: 238 ILAKVHSRFIVSLAYAFETKTD-----LCLVMTIMNGGDIRY--HIYNVDEDNPGFQEPR 290
Query: 168 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI-S 226
Y QI L ++H + +RD+KP+N+L++ + +++ D G A L G+
Sbjct: 291 AIFYTAQIVSGLEHLHQR-NIIYRDLKPENVLLDDDGN-VRISDLGLAVELKAGQTKTKG 348
Query: 227 YICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 268
Y + + APEL+ G EY ++D ++ G L E++ + F
Sbjct: 349 YAGTPGFMAPELLLG-EEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 29/207 (14%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 121
+V+G G+FG V++ + GE V I + + R N+E+ M +D+P+V
Sbjct: 55 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVC 114
Query: 122 SLKH-CFFSTTE--KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRA 178
L C ST + + +L+YV E H + + Y+ + QI +
Sbjct: 115 RLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YLLNWCVQIAKG 163
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY---YRA 235
+ Y+ + + HRD+ +N+LV H +K+ DFG AK+L E + + A
Sbjct: 164 MNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 221
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELL 262
E I YT D+WS G + EL+
Sbjct: 222 LESILHRI-YTHQSDVWSYGVTVWELM 247
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 26/208 (12%)
Query: 70 ERVVGHGSFGVVFQAKCLETGEA---VAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 121
E+V+G G FG V G+ VAIK + K R E M DHPNV+
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 97
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
L+ +T + ++ E++ ++ ++ + + +I + I +
Sbjct: 98 HLEGVVTKSTP-----VMIITEFMENGSLDSFLRQN---DGQFTVIQLVGMLRGIAAGMK 149
Query: 181 YIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR------YYR 234
Y+ + + HRD+ +N+LVN + K+ DFG ++ L + +Y + +
Sbjct: 150 YLAD-MNYVHRDLAARNILVNSNL-VCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWT 207
Query: 235 APELIFGATEYTAAIDIWSAGCVLAELL 262
APE I ++T+A D+WS G V+ E++
Sbjct: 208 APEAI-QYRKFTSASDVWSYGIVMWEVM 234
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 102/222 (45%), Gaps = 21/222 (9%)
Query: 58 NGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNR-------ELQ 110
QP ++ RV+G G FG VF + TG+ A KK+ + + K + E +
Sbjct: 178 EAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKK 237
Query: 111 TMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIY--- 167
+ + +VSL + F + T+ L LV+ + R H Y + + P
Sbjct: 238 ILAKVHSRFIVSLAYAFETKTD-----LCLVMTIMNGGDIRY--HIYNVDEDNPGFQEPR 290
Query: 168 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI-S 226
Y QI L ++H + +RD+KP+N+L++ + +++ D G A L G+
Sbjct: 291 AIFYTAQIVSGLEHLHQR-NIIYRDLKPENVLLDDDGN-VRISDLGLAVELKAGQTKTKG 348
Query: 227 YICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 268
Y + + APEL+ G EY ++D ++ G L E++ + F
Sbjct: 349 YAGTPGFMAPELLLG-EEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 114/243 (46%), Gaps = 41/243 (16%)
Query: 61 PKQTISYMAERVVGHGSFGVVFQAKCL---ETGEAVAIK-KVLQDKRYKNR------ELQ 110
P++ + + +V+G G+FG V A +TG ++ + K+L++K + EL+
Sbjct: 43 PRENLEF--GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELK 100
Query: 111 TM-RLLDHPNVVSLKHCFFSTTEKDELYLNL-------VLEYVPETVHRVIKHH--YKMS 160
M +L H N+V+L + T +YL +L Y+ + + Y+
Sbjct: 101 MMTQLGSHENIVNL---LGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQ 157
Query: 161 QRMP-------LIYVKL--YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCD 211
+R+ L + L + YQ+ + + ++ V HRD+ +N+LV H +K+CD
Sbjct: 158 KRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCV-HRDLAARNVLVT-HGKVVKICD 215
Query: 212 FGSAKVLVKGEPNISYICSRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPL 267
FG A+ ++ + +R + APE +F YT D+WS G +L E+ LG
Sbjct: 216 FGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGI-YTIKSDVWSYGILLWEIFSLGVNP 274
Query: 268 FPG 270
+PG
Sbjct: 275 YPG 277
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 106/222 (47%), Gaps = 28/222 (12%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKV-------LQDKRYKNRELQTMRLLDHPNVVSLKH 125
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N+ L
Sbjct: 32 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNI--LLF 85
Query: 126 CFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQ-RMPLIYVKLYFYQICRALAYIHN 184
+ST + L +V ++ + + HH S+ + + + Q R + Y+H
Sbjct: 86 MGYSTAPQ----LAIVTQWCEGSS---LYHHLHASETKFEMKKLIDIARQTARGMDYLHA 138
Query: 185 TIGVCHRDIKPQNLLVNPHTHQLKLCDFGSA--KVLVKGEPNISYIC-SRYYRAPELIF- 240
+ HRD+K N+ ++ + +K+ DFG A K G + S + APE+I
Sbjct: 139 K-SIIHRDLKSNNIFLH-EDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRM 196
Query: 241 -GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 281
+ Y+ D+++ G VL EL+ GQ + + DQ++E++
Sbjct: 197 QDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 238
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 29/207 (14%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 121
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 77
Query: 122 SLKH-CFFSTTE--KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRA 178
L C ST + + +L+YV E H + + Y+ + QI
Sbjct: 78 RLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YLLNWCVQIAEG 126
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY---YRA 235
+ Y+ + + HRD+ +N+LV H +K+ DFG AK+L E + + A
Sbjct: 127 MNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 184
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELL 262
E I YT D+WS G + EL+
Sbjct: 185 LESILHRI-YTHQSDVWSYGVTVWELM 210
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 102/215 (47%), Gaps = 22/215 (10%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQ------TMRLLDHPN 119
++ + ++G G FG V++ + L G VA+K+ L+++R + ELQ + + H N
Sbjct: 31 NFXNKNILGRGGFGKVYKGR-LADGXLVAVKR-LKEERTQGGELQFQTEVEMISMAVHRN 88
Query: 120 VVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQI--CR 177
++ L+ + TE+ +Y + V + + + PL + K + R
Sbjct: 89 LLRLRGFCMTPTERLLVYPYMANGSVASCLRE------RPESQPPLDWPKRQRIALGSAR 142
Query: 178 ALAYIHNTIG--VCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY--Y 233
LAY+H+ + HRD+K N+L++ + + DFG AK++ + ++ +
Sbjct: 143 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDXHVXXAVRGXIGH 201
Query: 234 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 268
APE + + + D++ G +L EL+ GQ F
Sbjct: 202 IAPEYL-STGKSSEKTDVFGYGVMLLELITGQRAF 235
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 26/207 (12%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVL--------QDKRYKNRELQTMRLLDHPNVVSLK 124
+G G FGVV++ T VA+KK+ + K+ ++E++ M H N+V L
Sbjct: 39 MGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL- 95
Query: 125 HCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIY-VKLYFYQ-ICRALAYI 182
FS+ D L LV Y+P ++ + PL + ++ Q + ++
Sbjct: 96 -LGFSSDGDD---LCLVYVYMPNG--SLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFL 149
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI---SYICSRYYRAPELI 239
H + HRDIK N+L++ K+ DFG A+ K + + + Y APE +
Sbjct: 150 HENHHI-HRDIKSANILLD-EAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEAL 207
Query: 240 FGATEYTAAIDIWSAGCVLAELLLGQP 266
G E T DI+S G VL E++ G P
Sbjct: 208 RG--EITPKSDIYSFGVVLLEIITGLP 232
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 26/207 (12%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVL--------QDKRYKNRELQTMRLLDHPNVVSLK 124
+G G FGVV++ T VA+KK+ + K+ ++E++ M H N+V L
Sbjct: 39 MGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL- 95
Query: 125 HCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIY-VKLYFYQ-ICRALAYI 182
FS+ D L LV Y+P ++ + PL + ++ Q + ++
Sbjct: 96 -LGFSSDGDD---LCLVYVYMPNG--SLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFL 149
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI---SYICSRYYRAPELI 239
H + HRDIK N+L++ K+ DFG A+ K + + + Y APE +
Sbjct: 150 HENHHI-HRDIKSANILLD-EAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEAL 207
Query: 240 FGATEYTAAIDIWSAGCVLAELLLGQP 266
G E T DI+S G VL E++ G P
Sbjct: 208 RG--EITPKSDIYSFGVVLLEIITGLP 232
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 102/215 (47%), Gaps = 22/215 (10%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQ------TMRLLDHPN 119
++ + ++G G FG V++ + L G VA+K+ L+++R + ELQ + + H N
Sbjct: 39 NFSNKNILGRGGFGKVYKGR-LADGTLVAVKR-LKEERXQGGELQFQTEVEMISMAVHRN 96
Query: 120 VVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQI--CR 177
++ L+ + TE+ +Y + V + + + PL + K + R
Sbjct: 97 LLRLRGFCMTPTERLLVYPYMANGSVASCLRE------RPESQPPLDWPKRQRIALGSAR 150
Query: 178 ALAYIHNTIG--VCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY--Y 233
LAY+H+ + HRD+K N+L++ + + DFG AK++ + ++ +
Sbjct: 151 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDXHVXXAVRGTIGH 209
Query: 234 RAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLF 268
APE + + + D++ G +L EL+ GQ F
Sbjct: 210 IAPEYL-STGKSSEKTDVFGYGVMLLELITGQRAF 243
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 105/208 (50%), Gaps = 22/208 (10%)
Query: 62 KQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKN---RELQTMRLLDHP 118
++ I+ + E +G G FGVV K + VA+K + + ++ +E QTM L HP
Sbjct: 7 REEITLLKE--LGSGQFGVVKLGK-WKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHP 63
Query: 119 NVVSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICR 177
+V F+ K E + +V EY+ + ++ H K + L+ + Y +C
Sbjct: 64 KLVK----FYGVCSK-EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEM---CYDVCE 115
Query: 178 ALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY---YR 234
+A++ + + HRD+ +N LV+ +K+ DFG + ++ + +S + +++ +
Sbjct: 116 GMAFLESHQFI-HRDLAARNCLVDRDL-CVKVSDFGMTRYVLDDQ-YVSSVGTKFPVKWS 172
Query: 235 APELIFGATEYTAAIDIWSAGCVLAELL 262
APE +F +Y++ D+W+ G ++ E+
Sbjct: 173 APE-VFHYFKYSSKSDVWAFGILMWEVF 199
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 26/207 (12%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVL--------QDKRYKNRELQTMRLLDHPNVVSLK 124
+G G FGVV++ T VA+KK+ + K+ ++E++ M H N+V L
Sbjct: 33 MGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL- 89
Query: 125 HCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIY-VKLYFYQ-ICRALAYI 182
FS+ D L LV Y+P ++ + PL + ++ Q + ++
Sbjct: 90 -LGFSSDGDD---LCLVYVYMPNG--SLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFL 143
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI---SYICSRYYRAPELI 239
H + HRDIK N+L++ K+ DFG A+ K + + + Y APE +
Sbjct: 144 HENHHI-HRDIKSANILLD-EAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEAL 201
Query: 240 FGATEYTAAIDIWSAGCVLAELLLGQP 266
G E T DI+S G VL E++ G P
Sbjct: 202 RG--EITPKSDIYSFGVVLLEIITGLP 226
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 27/208 (12%)
Query: 70 ERVVGHGSFGVVFQAKCLETGEA-----VAIKKVLQDKRYKNR-----ELQTMRLLDHPN 119
++V+G G FG V++ L+T VAIK + K R E M H N
Sbjct: 49 QKVIGAGEFGEVYKG-MLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHN 107
Query: 120 VVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRAL 179
++ L+ + ++ EY+ + K + ++ + I +
Sbjct: 108 IIRLEGVISKYKP-----MMIITEYMENGA--LDKFLREKDGEFSVLQLVGMLRGIAAGM 160
Query: 180 AYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR-----YYR 234
Y+ N + HRD+ +N+LVN + K+ DFG ++VL + +P +Y S +
Sbjct: 161 KYLAN-MNYVHRDLAARNILVNSNL-VCKVSDFGLSRVL-EDDPEATYTTSGGKIPIRWT 217
Query: 235 APELIFGATEYTAAIDIWSAGCVLAELL 262
APE I ++T+A D+WS G V+ E++
Sbjct: 218 APEAI-SYRKFTSASDVWSFGIVMWEVM 244
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLDHPNVVS-------- 122
+V+G G+FG V++ + GE V I ++ R +LD V++
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 123 --LKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
L C ST + LV + +P ++ H + R+ + + QI + ++
Sbjct: 83 RLLGICLTSTVQ-------LVTQLMPYGC--LLDHVRENRGRLGSQDLLNWCMQIAKGMS 133
Query: 181 YIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY---YRAPE 237
Y+ + + + HRD+ +N+LV H +K+ DFG A++L E + + A E
Sbjct: 134 YLED-VRLVHRDLAARNVLVKSPNH-VKITDFGLARLLDIDETEYHADGGKVPIKWMALE 191
Query: 238 LIFGATEYTAAIDIWSAGCVLAELL 262
I +T D+WS G + EL+
Sbjct: 192 SIL-RRRFTHQSDVWSYGVTVWELM 215
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 27/214 (12%)
Query: 65 ISYMA-ERVVGHGSFGVVFQAKCLETGE---AVAIKKVLQDKRYKNR-----ELQTMRLL 115
+SY+ E V+G G FG V + + G+ VAIK + + R E M
Sbjct: 13 VSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQF 72
Query: 116 DHPNVVSLKHCFFSTTEKDELYLNLVLEY-VPETVHRVIKHHYKMSQRMPLIYVKLYFYQ 174
+HPN++ L+ T + L +E ++ R+ + + Q + ++
Sbjct: 73 EHPNIIRLEGVV--TNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR------G 124
Query: 175 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR--- 231
I + Y+ + HRD+ +N+LVN + K+ DFG ++ L + + +Y S
Sbjct: 125 IASGMRYLAE-MSYVHRDLAARNILVNSNL-VCKVSDFGLSRFLEENSSDPTYTSSLGGK 182
Query: 232 ---YYRAPELIFGATEYTAAIDIWSAGCVLAELL 262
+ APE I ++T+A D WS G V+ E++
Sbjct: 183 IPIRWTAPEAI-AFRKFTSASDAWSYGIVMWEVM 215
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 93/207 (44%), Gaps = 29/207 (14%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 121
+V+ G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 122 SLKH-CFFSTTE--KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRA 178
L C ST + + +L+YV E H + + Y+ + QI +
Sbjct: 88 RLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YLLNWCVQIAKG 136
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY---YRA 235
+ Y+ + + HRD+ +N+LV H +K+ DFG AK+L E + + A
Sbjct: 137 MNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELL 262
E I YT D+WS G + EL+
Sbjct: 195 LESILHRI-YTHQSDVWSYGVTVWELM 220
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 27/206 (13%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 121
+V+ G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPE--TVHRVIKHHYKMSQRMPLIYVKLYFYQICRAL 179
L ++T + L+++ +P + V +H + + Y+ + QI + +
Sbjct: 88 RLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQ----YLLNWCVQIAKGM 137
Query: 180 AYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY---YRAP 236
Y+ + + HRD+ +N+LV H +K+ DFG AK+L E + + A
Sbjct: 138 NYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 195
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELL 262
E I YT D+WS G + EL+
Sbjct: 196 ESILHRI-YTHQSDVWSYGVTVWELM 220
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 93/207 (44%), Gaps = 29/207 (14%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKR-----YKNREL----QTMRLLDHPNVV 121
+V+ G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 21 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 122 SLKH-CFFSTTE--KDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRA 178
L C ST + + +L+YV E H + + Y+ + QI +
Sbjct: 81 RLLGICLTSTVQLITQLMPFGCLLDYVRE-------HKDNIGSQ----YLLNWCVQIAKG 129
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY---YRA 235
+ Y+ + + HRD+ +N+LV H +K+ DFG AK+L E + + A
Sbjct: 130 MNYLEDR-RLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELL 262
E I YT D+WS G + EL+
Sbjct: 188 LESILHRI-YTHQSDVWSYGVTVWELM 213
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 103/266 (38%), Gaps = 81/266 (30%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNREL---------QTMRLLDHPNVV 121
+ +G G FGVVF+AK AIK++ R NREL + + L+HP +V
Sbjct: 12 QCMGRGGFGVVFEAKNKVDDCNYAIKRI----RLPNRELAREKVMREVKALAKLEHPGIV 67
Query: 122 SLKHCFFST------TEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV------- 168
+ + T E DE++L P + + +RM
Sbjct: 68 RYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQL 127
Query: 169 -----KLYFY---QICR-------------------------------ALAYIHNTIGVC 189
K+Y Y Q+CR A+ ++H+ G+
Sbjct: 128 QPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSK-GLM 186
Query: 190 HRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGE-------PNISY------ICSRYYRAP 236
HRD+KP N+ +K+ DFG + + E P +Y + ++ Y +P
Sbjct: 187 HRDLKPSNIFFT-MDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSP 245
Query: 237 ELIFGATEYTAAIDIWSAGCVLAELL 262
E I G Y+ +DI+S G +L ELL
Sbjct: 246 EQIHG-NNYSHKVDIFSLGLILFELL 270
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 97/227 (42%), Gaps = 45/227 (19%)
Query: 63 QTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKV-LQDKRYKNRELQTMRL--LDHPN 119
Q++ V G FG V++A+ L E VA+K +QDK+ E + L + H N
Sbjct: 22 QSMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHEN 79
Query: 120 VVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQIC--- 176
++ F EK +++ L + H K S L + + ++C
Sbjct: 80 ILQ-----FIGAEKRGTSVDVDLWLI-------TAFHEKGSLSDFLKANVVSWNELCHIA 127
Query: 177 ----RALAYIHNTI---------GVCHRDIKPQNLLVNPHTHQLKLC--DFGSAKVLVKG 221
R LAY+H I + HRDIK +N+L+ + L C DFG A G
Sbjct: 128 ETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLK---NNLTACIADFGLALKFEAG 184
Query: 222 EP---NISYICSRYYRAPELIFGATEYTA----AIDIWSAGCVLAEL 261
+ + +R Y APE++ GA + ID+++ G VL EL
Sbjct: 185 KSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 102/224 (45%), Gaps = 22/224 (9%)
Query: 68 MAERVVGHGSFGVVFQAKCLETGEAVAIKKVL-----QDKRYKNRELQTMRLLDHPNVVS 122
M +G GSFG V++ K AV I KV+ Q + ++N E+ +R H N++
Sbjct: 39 MLSTRIGSGSFGTVYKGKW-HGDVAVKILKVVDPTPEQFQAFRN-EVAVLRKTRHVNIL- 95
Query: 123 LKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
F KD L +V ++ + + KH + + + + Q + + Y+
Sbjct: 96 ---LFMGYMTKDNL--AIVTQWCEGS--SLYKHLHVQETKFQMFQLIDIARQTAQGMDYL 148
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVK--GEPNISY-ICSRYYRAPELI 239
H + HRD+K N+ ++ +K+ DFG A V + G + S + APE+I
Sbjct: 149 HAK-NIIHRDMKSNNIFLHEGL-TVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVI 206
Query: 240 F--GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 281
++ D++S G VL EL+ G+ + + DQ++ ++
Sbjct: 207 RMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMV 250
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 97/229 (42%), Gaps = 38/229 (16%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVL----------QDKRYKNRELQTMRLL-DHPN 119
+ +G G+FG V +A G+ A+ KV +K EL+ M L H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 120 VVSL--------------KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPL 165
+V+L ++C + LN + P + + +++
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDL------LNFLRRKRPPGLEYSYNPSHNPEEQLSS 165
Query: 166 IYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI 225
+ + Q+ + +A++ + HRD+ +N+L+ + H K+ DFG A+ ++ I
Sbjct: 166 RDLLHFSSQVAQGMAFLASK-NCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNYI 223
Query: 226 SYICSRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPG 270
+R + APE IF YT D+WS G +L E+ LG +PG
Sbjct: 224 VKGNARLPVKWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 271
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 70 ERVVGHGSFGVVFQAKCLETGEA---VAIKKVLQDKRYKNR-----ELQTMRLLDHPNVV 121
E+V+G G FG V G+ VAIK + K R E M DHPNV+
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA 180
L+ +T + ++ E++ ++ ++ + + +I + I +
Sbjct: 72 HLEGVVTKSTP-----VMIITEFMENGSLDSFLRQN---DGQFTVIQLVGMLRGIAAGMK 123
Query: 181 YIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR------YYR 234
Y+ + + HR + +N+LVN + K+ DFG ++ L + +Y + +
Sbjct: 124 YLAD-MNYVHRALAARNILVNSNL-VCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWT 181
Query: 235 APELIFGATEYTAAIDIWSAGCVLAELL 262
APE I ++T+A D+WS G V+ E++
Sbjct: 182 APEAI-QYRKFTSASDVWSYGIVMWEVM 208
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 104/221 (47%), Gaps = 26/221 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKV-------LQDKRYKNRELQTMRLLDHPNVVSLKH 125
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N++
Sbjct: 44 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 95
Query: 126 CFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNT 185
F + K +L +V ++ + + H + + + +I + Q + + Y+H
Sbjct: 96 LFMGYSTKPQL--AIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 151
Query: 186 IGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIF-- 240
+ HRD+K N+ ++ +K+ DFG A V + + + S + APE+I
Sbjct: 152 -SIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 209
Query: 241 GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 281
Y+ D+++ G VL EL+ GQ + + DQ++ ++
Sbjct: 210 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 250
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 104/221 (47%), Gaps = 26/221 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKV-------LQDKRYKNRELQTMRLLDHPNVVSLKH 125
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N++
Sbjct: 43 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 94
Query: 126 CFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNT 185
F + K +L +V ++ + + H + + + +I + Q + + Y+H
Sbjct: 95 LFMGYSTKPQL--AIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 150
Query: 186 IGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIF-- 240
+ HRD+K N+ ++ +K+ DFG A V + + + S + APE+I
Sbjct: 151 -SIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 208
Query: 241 GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 281
Y+ D+++ G VL EL+ GQ + + DQ++ ++
Sbjct: 209 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 249
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 96/244 (39%), Gaps = 60/244 (24%)
Query: 61 PKQTISYMAERVVGHGSFGVVFQAKC-----LETGEAVAIKKVLQDKRYK-----NRELQ 110
P+ I Y+ R +G G+FG VFQA+ E VA+K + ++ RE
Sbjct: 45 PRNNIEYV--RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAA 102
Query: 111 TMRLLDHPNVVSL--------KHC----FFSTTEKDELYLNLVLEYVPETVHRVIKHHYK 158
M D+PN+V L C + + + +E ++ V H + +
Sbjct: 103 LMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRAR 162
Query: 159 MSQRMP--------LIYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLC 210
+S P L + Q+ +AY+ V HRD+ +N LV +K+
Sbjct: 163 VSSPGPPPLSCAEQLCIAR----QVAAGMAYLSERKFV-HRDLATRNCLVG-ENMVVKIA 216
Query: 211 DFGSAKVLVKGEPNISYICSRYYRA------------PELIFGATEYTAAIDIWSAGCVL 258
DFG ++ + + YY+A PE IF YT D+W+ G VL
Sbjct: 217 DFGLSRNIYSAD---------YYKADGNDAIPIRWMPPESIF-YNRYTTESDVWAYGVVL 266
Query: 259 AELL 262
E+
Sbjct: 267 WEIF 270
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 104/221 (47%), Gaps = 26/221 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKV-------LQDKRYKNRELQTMRLLDHPNVVSLKH 125
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N++
Sbjct: 21 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 72
Query: 126 CFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNT 185
F + K +L +V ++ + + H + + + +I + Q + + Y+H
Sbjct: 73 LFMGYSTKPQL--AIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 128
Query: 186 IGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIF-- 240
+ HRD+K N+ ++ +K+ DFG A V + + + S + APE+I
Sbjct: 129 -SIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 186
Query: 241 GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 281
Y+ D+++ G VL EL+ GQ + + DQ++ ++
Sbjct: 187 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 227
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 104/221 (47%), Gaps = 26/221 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKV-------LQDKRYKNRELQTMRLLDHPNVVSLKH 125
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N++
Sbjct: 21 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 72
Query: 126 CFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNT 185
F + K +L +V ++ + + H + + + +I + Q + + Y+H
Sbjct: 73 LFMGYSTKPQL--AIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 128
Query: 186 IGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIF-- 240
+ HRD+K N+ ++ +K+ DFG A V + + + S + APE+I
Sbjct: 129 -SIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 186
Query: 241 GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 281
Y+ D+++ G VL EL+ GQ + + DQ++ ++
Sbjct: 187 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 227
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 104/221 (47%), Gaps = 26/221 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKV-------LQDKRYKNRELQTMRLLDHPNVVSLKH 125
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N++
Sbjct: 18 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 69
Query: 126 CFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNT 185
F + K +L +V ++ + + H + + + +I + Q + + Y+H
Sbjct: 70 LFMGYSTKPQL--AIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 125
Query: 186 IGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIF-- 240
+ HRD+K N+ ++ +K+ DFG A V + + + S + APE+I
Sbjct: 126 -SIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 183
Query: 241 GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 281
Y+ D+++ G VL EL+ GQ + + DQ++ ++
Sbjct: 184 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 224
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 46/102 (45%), Gaps = 25/102 (24%)
Query: 175 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQ--LKLCDFGSAKVLVKGEPNISYICSRY 232
I A+ Y+H +I + HRD+KP+NLL LKL DFG AK GE
Sbjct: 126 IGEAIQYLH-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTGE---------- 173
Query: 233 YRAPELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGV 274
+Y + D+WS G ++ LL G P F G+
Sbjct: 174 -----------KYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 204
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 27/214 (12%)
Query: 65 ISYMA-ERVVGHGSFGVVFQAKCLETGE---AVAIKKVLQDKRYKNR-----ELQTMRLL 115
+SY+ E V+G G FG V + + G+ VAIK + + R E M
Sbjct: 15 VSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQF 74
Query: 116 DHPNVVSLKHCFFSTTEKDELYLNLVLEY-VPETVHRVIKHHYKMSQRMPLIYVKLYFYQ 174
+HPN++ L+ T + L +E ++ R+ + + Q + ++
Sbjct: 75 EHPNIIRLEGVV--TNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR------G 126
Query: 175 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR--- 231
I + Y+ + HRD+ +N+LVN + K+ DFG ++ L + + + S
Sbjct: 127 IASGMRYLAE-MSYVHRDLAARNILVNSNL-VCKVSDFGLSRFLEENSSDPTETSSLGGK 184
Query: 232 ---YYRAPELIFGATEYTAAIDIWSAGCVLAELL 262
+ APE I ++T+A D WS G V+ E++
Sbjct: 185 IPIRWTAPEAI-AFRKFTSASDAWSYGIVMWEVM 217
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 104/221 (47%), Gaps = 26/221 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKV-------LQDKRYKNRELQTMRLLDHPNVVSLKH 125
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N++
Sbjct: 16 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 67
Query: 126 CFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNT 185
F + K +L +V ++ + + H + + + +I + Q + + Y+H
Sbjct: 68 LFMGYSTKPQL--AIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 123
Query: 186 IGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIF-- 240
+ HRD+K N+ ++ +K+ DFG A V + + + S + APE+I
Sbjct: 124 -SIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 241 GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 281
Y+ D+++ G VL EL+ GQ + + DQ++ ++
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 91/206 (44%), Gaps = 26/206 (12%)
Query: 74 GHGSFGVVFQAKCLETGEAVAIKKVL--------QDKRYKNRELQTMRLLDHPNVVSLKH 125
G G FGVV++ T VA+KK+ + K+ ++E++ H N+V L
Sbjct: 31 GEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVEL-- 86
Query: 126 CFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIY-VKLYFYQ-ICRALAYIH 183
FS+ D L LV Y P ++ + PL + + Q + ++H
Sbjct: 87 LGFSSDGDD---LCLVYVYXPNG--SLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLH 141
Query: 184 NTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIF 240
+ HRDIK N+L++ K+ DFG A+ K + + + Y APE +
Sbjct: 142 ENHHI-HRDIKSANILLD-EAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALR 199
Query: 241 GATEYTAAIDIWSAGCVLAELLLGQP 266
G E T DI+S G VL E++ G P
Sbjct: 200 G--EITPKSDIYSFGVVLLEIITGLP 223
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 97/222 (43%), Gaps = 30/222 (13%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVL----------QDKRYKNRELQTMRLL-DHPN 119
+ +G G+FG V +A G+ A+ KV +K EL+ M L H N
Sbjct: 44 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 103
Query: 120 VVSLKHCFFSTTEKDELYLNLVLEY-----VPETVHRVIKHHYKMSQRMPLIYVKLYFY- 173
+V+L + T + + + EY + + R + PL L +
Sbjct: 104 IVNL---LGACTHGGPVLV--ITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFS 158
Query: 174 -QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY 232
Q+ + +A++ + HRD+ +N+L+ + H K+ DFG A+ ++ I +R
Sbjct: 159 SQVAQGMAFLASK-NCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNYIVKGNARL 216
Query: 233 ---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPG 270
+ APE IF YT D+WS G +L E+ LG +PG
Sbjct: 217 PVKWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 257
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 103/221 (46%), Gaps = 26/221 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKV-------LQDKRYKNRELQTMRLLDHPNVVSLKH 125
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N++
Sbjct: 44 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 95
Query: 126 CFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNT 185
F + K +L +V ++ + + H + + + +I + Q + + Y+H
Sbjct: 96 LFMGYSTKPQL--AIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 151
Query: 186 IGVCHRDIKPQNLLVNPHTHQLKLCDFGSA--KVLVKGEPNISYIC-SRYYRAPELIF-- 240
+ HRD+K N+ ++ +K+ DFG A K G + S + APE+I
Sbjct: 152 -SIIHRDLKSNNIFLHEDL-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 209
Query: 241 GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 281
Y+ D+++ G VL EL+ GQ + + DQ++ ++
Sbjct: 210 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 250
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 97/222 (43%), Gaps = 30/222 (13%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVL----------QDKRYKNRELQTMRLL-DHPN 119
+ +G G+FG V +A G+ A+ KV +K EL+ M L H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 120 VVSLKHCFFSTTEKDELYLNLVLEY-----VPETVHRVIKHHYKMSQRMPLIYVKLYFY- 173
+V+L + T + + + EY + + R + PL L +
Sbjct: 112 IVNL---LGACTHGGPVLV--ITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFS 166
Query: 174 -QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY 232
Q+ + +A++ + HRD+ +N+L+ + H K+ DFG A+ ++ I +R
Sbjct: 167 SQVAQGMAFLASK-NCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNYIVKGNARL 224
Query: 233 ---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPG 270
+ APE IF YT D+WS G +L E+ LG +PG
Sbjct: 225 PVKWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 265
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 97/229 (42%), Gaps = 40/229 (17%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVL----------QDKRYKNRELQTMRLL-DHPN 119
+ +G G+FG V +A G+ A+ KV +K EL+ M L H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 120 VVSL--------------KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPL 165
+V+L ++C + D L V ET + +S R L
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYG----DLLNFLRRKSRVLETDPAFAIANSTLSTRDLL 167
Query: 166 IYVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI 225
+ Q+ + +A++ + HRD+ +N+L+ + H K+ DFG A+ ++ I
Sbjct: 168 HFSS----QVAQGMAFLASK-NCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNYI 221
Query: 226 SYICSRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPG 270
+R + APE IF YT D+WS G +L E+ LG +PG
Sbjct: 222 VKGNARLPVKWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 269
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 190 HRDIKPQNLLVNPHTHQLKLCDFG--SAKVLVKGEPNISYICSRYYRAPELIFGATEYTA 247
HRD+KP+N+LV+ L DFG SA K + + + YY APE F + T
Sbjct: 157 HRDVKPENILVSADDFAY-LVDFGIASATTDEKLTQLGNTVGTLYYXAPER-FSESHATY 214
Query: 248 AIDIWSAGCVLAELLLGQPLFPGE 271
DI++ CVL E L G P + G+
Sbjct: 215 RADIYALTCVLYECLTGSPPYQGD 238
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 103/221 (46%), Gaps = 26/221 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKV-------LQDKRYKNRELQTMRLLDHPNVVSLKH 125
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N++
Sbjct: 36 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 87
Query: 126 CFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNT 185
F + K +L +V ++ + + H + + + +I + Q + + Y+H
Sbjct: 88 LFMGYSTKPQL--AIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 143
Query: 186 IGVCHRDIKPQNLLVNPHTHQLKLCDFGSA--KVLVKGEPNISYIC-SRYYRAPELIF-- 240
+ HRD+K N+ ++ +K+ DFG A K G + S + APE+I
Sbjct: 144 -SIIHRDLKSNNIFLHEDL-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 201
Query: 241 GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 281
Y+ D+++ G VL EL+ GQ + + DQ++ ++
Sbjct: 202 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 242
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 103/221 (46%), Gaps = 26/221 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKV-------LQDKRYKNRELQTMRLLDHPNVVSLKH 125
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N++
Sbjct: 16 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 67
Query: 126 CFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNT 185
F + K +L +V ++ + + H + + + +I + Q + + Y+H
Sbjct: 68 LFMGYSTKPQL--AIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 123
Query: 186 IGVCHRDIKPQNLLVNPHTHQLKLCDFGSA--KVLVKGEPNISYIC-SRYYRAPELIF-- 240
+ HRD+K N+ ++ +K+ DFG A K G + S + APE+I
Sbjct: 124 -SIIHRDLKSNNIFLHEDL-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 241 GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 281
Y+ D+++ G VL EL+ GQ + + DQ++ ++
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 104/221 (47%), Gaps = 26/221 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKV-------LQDKRYKNRELQTMRLLDHPNVVSLKH 125
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N+ L
Sbjct: 16 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNI--LLF 69
Query: 126 CFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNT 185
+ST + L +V ++ + + H + + + +I + Q + + Y+H
Sbjct: 70 MGYSTAPQ----LAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 123
Query: 186 IGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIF-- 240
+ HRD+K N+ ++ +K+ DFG A V + + + S + APE+I
Sbjct: 124 -SIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 241 GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII 281
Y+ D+++ G VL EL+ GQ + + DQ++ ++
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 97/230 (42%), Gaps = 42/230 (18%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVL----------QDKRYKNRELQTMRLL-DHPN 119
+ +G G+FG V +A G+ A+ KV +K EL+ M L H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 120 VVSL--------------KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPL 165
+V+L ++C + + VLE P + ++
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPA---------FAIANSTAS 162
Query: 166 IYVKLYFY-QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPN 224
L+F Q+ + +A++ + HRD+ +N+L+ + H K+ DFG A+ ++
Sbjct: 163 TRDLLHFSSQVAQGMAFLASK-NCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNY 220
Query: 225 ISYICSRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPG 270
I +R + APE IF YT D+WS G +L E+ LG +PG
Sbjct: 221 IVKGNARLPVKWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 269
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 120/291 (41%), Gaps = 46/291 (15%)
Query: 61 PKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNR------------E 108
P I + E V+G G FG V+ L+ KK+ + NR E
Sbjct: 28 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTE 82
Query: 109 LQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 168
M+ HPNV+SL + E +VL Y+ H +++ + P +
Sbjct: 83 GIIMKDFSHPNVLSL----LGICLRSEGSPLVVLPYMK---HGDLRNFIRNETHNPTVKD 135
Query: 169 KLYF-YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 227
+ F Q+ + + ++ + V HRD+ +N +++ +K+ DFG A+ ++ E + +
Sbjct: 136 LIGFGLQVAKGMKFLASKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMLDKEFDSVH 193
Query: 228 ------ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEI 280
+ ++ L ++T D+WS G +L EL+ G P +P + D V +
Sbjct: 194 NKTGAKLPVKWMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 251
Query: 281 IKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL 331
+ + + + P Y ++ WH + M P +LVSR+
Sbjct: 252 L--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 292
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 118/291 (40%), Gaps = 46/291 (15%)
Query: 61 PKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNR------------E 108
P I + E V+G G FG V+ L+ KK+ + NR E
Sbjct: 26 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTE 80
Query: 109 LQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 168
M+ HPNV+SL + E +VL Y+ H +++ + P +
Sbjct: 81 GIIMKDFSHPNVLSL----LGICLRSEGSPLVVLPYMK---HGDLRNFIRNETHNPTVKD 133
Query: 169 KLYF-YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 227
+ F Q+ + + Y+ + V HRD+ +N +++ +K+ DFG A+ + E +
Sbjct: 134 LIGFGLQVAKGMKYLASKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKEXXSVH 191
Query: 228 ------ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEI 280
+ ++ L ++T D+WS G +L EL+ G P +P + D V +
Sbjct: 192 NKTGAKLPVKWMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 249
Query: 281 IKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL 331
+ + + + P Y ++ WH + M P +LVSR+
Sbjct: 250 L--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 290
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/311 (20%), Positives = 114/311 (36%), Gaps = 54/311 (17%)
Query: 72 VVGHG--SFGVVFQAKCLETGEAVAIKKVLQDK------RYKNRELQTMRLLDHPNVVSL 123
V+G G V A+ TGE V ++++ + + EL +L +HPN+V
Sbjct: 16 VIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPY 75
Query: 124 KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
+ F + +EL++ + H + + Y+ + +AL YIH
Sbjct: 76 RATFIA---DNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYI---LQGVLKALDYIH 129
Query: 184 NTIGVCHRDIKPQNLLVNPH--------THQLKLCDFGSAKVLVKGEPNISYICSRYYRA 235
+ +G HR +K ++L++ L + G + +V P S +
Sbjct: 130 H-MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSP 188
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII-------------- 281
L Y A DI+S G EL G F L+E +
Sbjct: 189 EVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIP 248
Query: 282 --KVLGTPTR--------EEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL 331
++ +P+R + + P + P +HP+H+ F P V +
Sbjct: 249 AEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSP---SHPYHRTFS----PHFHHFVEQC 301
Query: 332 LQYSPNLRSTA 342
LQ +P+ R +A
Sbjct: 302 LQRNPDARPSA 312
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 121/289 (41%), Gaps = 42/289 (14%)
Query: 61 PKQTISYMAERVVGHGSFGVVFQAKCLET-GEAV--AIKKV--LQDKRYKNRELQ---TM 112
P I + E V+G G FG V+ L+ G+ + A+K + + D ++ L M
Sbjct: 45 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 103
Query: 113 RLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYF 172
+ HPNV+SL + E +VL Y+ H +++ + P + + F
Sbjct: 104 KDFSHPNVLSL----LGICLRSEGSPLVVLPYMK---HGDLRNFIRNETHNPTVKDLIGF 156
Query: 173 -YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 231
Q+ + + Y+ + V HRD+ +N +++ +K+ DFG A+ + E Y
Sbjct: 157 GLQVAKGMKYLASKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKE----YYSVH 210
Query: 232 YYRAPEL--------IFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEIIK 282
+L ++T D+WS G +L EL+ G P +P + D V ++
Sbjct: 211 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL- 269
Query: 283 VLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL 331
+ + + P Y ++ WH + M P +LVSR+
Sbjct: 270 -------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 309
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/311 (20%), Positives = 114/311 (36%), Gaps = 54/311 (17%)
Query: 72 VVGHG--SFGVVFQAKCLETGEAVAIKKVLQDK------RYKNRELQTMRLLDHPNVVSL 123
V+G G V A+ TGE V ++++ + + EL +L +HPN+V
Sbjct: 32 VIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPY 91
Query: 124 KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIH 183
+ F + +EL++ + H + + Y+ + +AL YIH
Sbjct: 92 RATFIA---DNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYI---LQGVLKALDYIH 145
Query: 184 NTIGVCHRDIKPQNLLVNPH--------THQLKLCDFGSAKVLVKGEPNISYICSRYYRA 235
+ +G HR +K ++L++ L + G + +V P S +
Sbjct: 146 H-MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSP 204
Query: 236 PELIFGATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEII-------------- 281
L Y A DI+S G EL G F L+E +
Sbjct: 205 EVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIP 264
Query: 282 --KVLGTPTR--------EEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL 331
++ +P+R + + P + P +HP+H+ F P V +
Sbjct: 265 AEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSP---SHPYHRTFS----PHFHHFVEQC 317
Query: 332 LQYSPNLRSTA 342
LQ +P+ R +A
Sbjct: 318 LQRNPDARPSA 328
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 118/291 (40%), Gaps = 46/291 (15%)
Query: 61 PKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNR------------E 108
P I + E V+G G FG V+ L+ KK+ + NR E
Sbjct: 19 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTE 73
Query: 109 LQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 168
M+ HPNV+SL + E +VL Y+ H +++ + P +
Sbjct: 74 GIIMKDFSHPNVLSL----LGICLRSEGSPLVVLPYMK---HGDLRNFIRNETHNPTVKD 126
Query: 169 KLYF-YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGE----- 222
+ F Q+ + + Y+ + V HRD+ +N +++ +K+ DFG A+ + E
Sbjct: 127 LIGFGLQVAKGMKYLASKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVH 184
Query: 223 -PNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEI 280
+ + ++ L ++T D+WS G +L EL+ G P +P + D V +
Sbjct: 185 NKTGAKLPVKWMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 242
Query: 281 IKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL 331
+ + + + P Y ++ WH + M P +LVSR+
Sbjct: 243 L--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 283
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 118/291 (40%), Gaps = 46/291 (15%)
Query: 61 PKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNR------------E 108
P I + E V+G G FG V+ L+ KK+ + NR E
Sbjct: 27 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTE 81
Query: 109 LQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 168
M+ HPNV+SL + E +VL Y+ H +++ + P +
Sbjct: 82 GIIMKDFSHPNVLSL----LGICLRSEGSPLVVLPYMK---HGDLRNFIRNETHNPTVKD 134
Query: 169 KLYF-YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGE----- 222
+ F Q+ + + Y+ + V HRD+ +N +++ +K+ DFG A+ + E
Sbjct: 135 LIGFGLQVAKGMKYLASKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVH 192
Query: 223 -PNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEI 280
+ + ++ L ++T D+WS G +L EL+ G P +P + D V +
Sbjct: 193 NKTGAKLPVKWMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 250
Query: 281 IKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL 331
+ + + + P Y ++ WH + M P +LVSR+
Sbjct: 251 L--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 291
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 118/291 (40%), Gaps = 46/291 (15%)
Query: 61 PKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNR------------E 108
P I + E V+G G FG V+ L+ KK+ + NR E
Sbjct: 24 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTE 78
Query: 109 LQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 168
M+ HPNV+SL + E +VL Y+ H +++ + P +
Sbjct: 79 GIIMKDFSHPNVLSL----LGICLRSEGSPLVVLPYMK---HGDLRNFIRNETHNPTVKD 131
Query: 169 KLYF-YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGE----- 222
+ F Q+ + + Y+ + V HRD+ +N +++ +K+ DFG A+ + E
Sbjct: 132 LIGFGLQVAKGMKYLASKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVH 189
Query: 223 -PNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEI 280
+ + ++ L ++T D+WS G +L EL+ G P +P + D V +
Sbjct: 190 NKTGAKLPVKWMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 247
Query: 281 IKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL 331
+ + + + P Y ++ WH + M P +LVSR+
Sbjct: 248 L--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 288
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 34/212 (16%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIK---KVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFS 129
VG G +G V++ L GE+VA+K + ++ E+ LL H N++
Sbjct: 16 VGKGRYGEVWRG--LWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDM- 72
Query: 130 TTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTI--- 186
T+ L L+ Y H + + P + ++L C LA++H I
Sbjct: 73 TSRNSSTQLWLITHY---HEHGSLYDFLQRQTLEPHLALRLAVSAAC-GLAHLHVEIFGT 128
Query: 187 ----GVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEP-----NISYICSRYYRAPE 237
+ HRD K +N+LV + Q + D G A + +G N + ++ Y APE
Sbjct: 129 QGKPAIAHRDFKSRNVLVKSNL-QCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPE 187
Query: 238 LI--------FGATEYTAAIDIWSAGCVLAEL 261
++ F + ++T DIW+ G VL E+
Sbjct: 188 VLDEQIRTDCFESYKWT---DIWAFGLVLWEI 216
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 118/291 (40%), Gaps = 46/291 (15%)
Query: 61 PKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNR------------E 108
P I + E V+G G FG V+ L+ KK+ + NR E
Sbjct: 25 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTE 79
Query: 109 LQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 168
M+ HPNV+SL + E +VL Y+ H +++ + P +
Sbjct: 80 GIIMKDFSHPNVLSL----LGICLRSEGSPLVVLPYMK---HGDLRNFIRNETHNPTVKD 132
Query: 169 KLYF-YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGE----- 222
+ F Q+ + + Y+ + V HRD+ +N +++ +K+ DFG A+ + E
Sbjct: 133 LIGFGLQVAKGMKYLASKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVH 190
Query: 223 -PNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEI 280
+ + ++ L ++T D+WS G +L EL+ G P +P + D V +
Sbjct: 191 NKTGAKLPVKWMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 248
Query: 281 IKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL 331
+ + + + P Y ++ WH + M P +LVSR+
Sbjct: 249 L--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 289
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 78/163 (47%), Gaps = 16/163 (9%)
Query: 60 QPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNREL----QTMRLL 115
+P+ + R +G GSFG ++ ++T E VAIK L++ + K+ +L + R+L
Sbjct: 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK--LENVKTKHPQLLYESKIYRIL 59
Query: 116 DHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQI 175
+ F E D Y LV++ + ++ + S+++ L V + Q+
Sbjct: 60 QGGTGIPNVRWF--GVEGD--YNVLVMDLLGPSLEDLFNF---CSRKLSLKTVLMLADQM 112
Query: 176 CRALAYIHNTIGVCHRDIKPQNLL--VNPHTHQLKLCDFGSAK 216
+ ++H+ HRDIKP N L + +Q+ + DFG AK
Sbjct: 113 INRVEFVHSK-SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 118/291 (40%), Gaps = 46/291 (15%)
Query: 61 PKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNR------------E 108
P I + E V+G G FG V+ L+ KK+ + NR E
Sbjct: 46 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTE 100
Query: 109 LQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 168
M+ HPNV+SL + E +VL Y+ H +++ + P +
Sbjct: 101 GIIMKDFSHPNVLSL----LGICLRSEGSPLVVLPYMK---HGDLRNFIRNETHNPTVKD 153
Query: 169 KLYF-YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGE----- 222
+ F Q+ + + Y+ + V HRD+ +N +++ +K+ DFG A+ + E
Sbjct: 154 LIGFGLQVAKGMKYLASKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVH 211
Query: 223 -PNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEI 280
+ + ++ L ++T D+WS G +L EL+ G P +P + D V +
Sbjct: 212 NKTGAKLPVKWMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 269
Query: 281 IKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL 331
+ + + + P Y ++ WH + M P +LVSR+
Sbjct: 270 L--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 310
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 119/291 (40%), Gaps = 46/291 (15%)
Query: 61 PKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNR------------E 108
P I + E V+G G FG V+ L+ KK+ + NR E
Sbjct: 86 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTE 140
Query: 109 LQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 168
M+ HPNV+SL + E +VL Y+ H +++ + P +
Sbjct: 141 GIIMKDFSHPNVLSL----LGICLRSEGSPLVVLPYMK---HGDLRNFIRNETHNPTVKD 193
Query: 169 KLYF-YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 227
+ F Q+ + + ++ + V HRD+ +N +++ +K+ DFG A+ + E
Sbjct: 194 LIGFGLQVAKGMKFLASKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKE--FDS 249
Query: 228 ICSRYYRAPELIFGATE------YTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEI 280
+ ++ + + A E +T D+WS G +L EL+ G P +P + D V +
Sbjct: 250 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 309
Query: 281 IKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL 331
+ + + + P Y ++ WH + M P +LVSR+
Sbjct: 310 L--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 350
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 116/293 (39%), Gaps = 50/293 (17%)
Query: 61 PKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNR------------E 108
P I + E V+G G FG V+ L+ KK+ + NR E
Sbjct: 22 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTE 76
Query: 109 LQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 168
M+ HPNV+SL + E +VL Y+ H +++ + P +
Sbjct: 77 GIIMKDFSHPNVLSL----LGICLRSEGSPLVVLPYMK---HGDLRNFIRNETHNPTVKD 129
Query: 169 KLYF-YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 227
+ F Q+ + + Y+ + V HRD+ +N +++ +K+ DFG A+ + E Y
Sbjct: 130 LIGFGLQVAKGMKYLASKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKE----Y 183
Query: 228 ICSRYYRAPEL--------IFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLV 278
+L ++T D+WS G +L EL+ G P +P + D V
Sbjct: 184 YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 243
Query: 279 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL 331
++ + + + P Y ++ WH + M P +LVSR+
Sbjct: 244 YLL--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 286
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 116/293 (39%), Gaps = 50/293 (17%)
Query: 61 PKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNR------------E 108
P I + E V+G G FG V+ L+ KK+ + NR E
Sbjct: 26 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTE 80
Query: 109 LQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 168
M+ HPNV+SL + E +VL Y+ H +++ + P +
Sbjct: 81 GIIMKDFSHPNVLSL----LGICLRSEGSPLVVLPYMK---HGDLRNFIRNETHNPTVKD 133
Query: 169 KLYF-YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 227
+ F Q+ + + Y+ + V HRD+ +N +++ +K+ DFG A+ + E Y
Sbjct: 134 LIGFGLQVAKGMKYLASKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKE----Y 187
Query: 228 ICSRYYRAPEL--------IFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLV 278
+L ++T D+WS G +L EL+ G P +P + D V
Sbjct: 188 YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 247
Query: 279 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL 331
++ + + + P Y ++ WH + M P +LVSR+
Sbjct: 248 YLL--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 290
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 118/291 (40%), Gaps = 46/291 (15%)
Query: 61 PKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNR------------E 108
P I + E V+G G FG V+ L+ KK+ + NR E
Sbjct: 27 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTE 81
Query: 109 LQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 168
M+ HPNV+SL + E +VL Y+ H +++ + P +
Sbjct: 82 GIIMKDFSHPNVLSL----LGICLRSEGSPLVVLPYMK---HGDLRNFIRNETHNPTVKD 134
Query: 169 KLYF-YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGE----- 222
+ F Q+ + + Y+ + V HRD+ +N +++ +K+ DFG A+ + E
Sbjct: 135 LIGFGLQVAKGMKYLASKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVH 192
Query: 223 -PNISYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEI 280
+ + ++ L ++T D+WS G +L EL+ G P +P + D V +
Sbjct: 193 NKTGAKLPVKWMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 250
Query: 281 IKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL 331
+ + + + P Y ++ WH + M P +LVSR+
Sbjct: 251 L--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 291
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 119/291 (40%), Gaps = 46/291 (15%)
Query: 61 PKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNR------------E 108
P I + E V+G G FG V+ L+ KK+ + NR E
Sbjct: 32 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTE 86
Query: 109 LQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 168
M+ HPNV+SL + E +VL Y+ H +++ + P +
Sbjct: 87 GIIMKDFSHPNVLSL----LGICLRSEGSPLVVLPYMK---HGDLRNFIRNETHNPTVKD 139
Query: 169 KLYF-YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 227
+ F Q+ + + ++ + V HRD+ +N +++ +K+ DFG A+ + E
Sbjct: 140 LIGFGLQVAKGMKFLASKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKE--FDS 195
Query: 228 ICSRYYRAPELIFGATE------YTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEI 280
+ ++ + + A E +T D+WS G +L EL+ G P +P + D V +
Sbjct: 196 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 255
Query: 281 IKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL 331
+ + + + P Y ++ WH + M P +LVSR+
Sbjct: 256 L--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 296
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 89/212 (41%), Gaps = 25/212 (11%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQD--KRYKNRELQTMRLL---DHPNVVSLKHCF 127
+G G+FG VF + VA+K + K + LQ R+L HPN+V L
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRL---I 178
Query: 128 FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIG 187
T+K +Y +V+E V + + VK + A A +
Sbjct: 179 GVCTQKQPIY--IVMELVQGGDFLTF-----LRTEGARLRVKTLLQMVGDAAAGMEYLES 231
Query: 188 VC--HRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRY---YRAPE-LIFG 241
C HRD+ +N LV + LK+ DFG ++ G S + + APE L +G
Sbjct: 232 KCCIHRDLAARNCLVT-EKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYG 290
Query: 242 ATEYTAAIDIWSAGCVLAELL-LGQPLFPGES 272
Y++ D+WS G +L E LG +P S
Sbjct: 291 --RYSSESDVWSFGILLWETFSLGASPYPNLS 320
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 119/291 (40%), Gaps = 46/291 (15%)
Query: 61 PKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNR------------E 108
P I + E V+G G FG V+ L+ KK+ + NR E
Sbjct: 28 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTE 82
Query: 109 LQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 168
M+ HPNV+SL + E +VL Y+ H +++ + P +
Sbjct: 83 GIIMKDFSHPNVLSL----LGICLRSEGSPLVVLPYMK---HGDLRNFIRNETHNPTVKD 135
Query: 169 KLYF-YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 227
+ F Q+ + + ++ + V HRD+ +N +++ +K+ DFG A+ + E
Sbjct: 136 LIGFGLQVAKGMKFLASKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKE--FDS 191
Query: 228 ICSRYYRAPELIFGATE------YTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEI 280
+ ++ + + A E +T D+WS G +L EL+ G P +P + D V +
Sbjct: 192 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 251
Query: 281 IKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL 331
+ + + + P Y ++ WH + M P +LVSR+
Sbjct: 252 L--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 292
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 101/231 (43%), Gaps = 38/231 (16%)
Query: 73 VGHGSFGVVFQAKC-LETGEAVAIK------KVLQDKRYKN---RELQTMRLLDHPNVVS 122
+G GSFGVV + + +G+ V++ VL + RE+ M LDH N++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 123 LKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKH--HYKMSQRMPLIYVKLYFYQICRA 178
L + K +V E P + R+ KH H+ + + Y Q+
Sbjct: 86 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGT------LSRYAVQVAEG 133
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYR---- 234
+ Y+ + + HRD+ +NLL+ +K+ DFG + L + + + Y+ + +
Sbjct: 134 MGYLESKRFI-HRDLAARNLLLATRD-LVKIGDFGLMRALPQNDDH--YVMQEHRKVPFA 189
Query: 235 --APELIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEIIK 282
APE + T ++ A D W G L E+ GQ + G +G L +I K
Sbjct: 190 WCAPESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 239
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 98/238 (41%), Gaps = 49/238 (20%)
Query: 71 RVVGHGSFGVVFQAKCLETGEAVAIKKVL----------QDKRYKNRELQTM-RLLDHPN 119
+ +G G+FG V +A G+ A+ KV +K EL+ M L H N
Sbjct: 37 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 96
Query: 120 VVSL--------------KHC-------FFSTTEKDELYLNLVLEYVPETVHRVIKHHYK 158
+V+L ++C F + L +L PE + +
Sbjct: 97 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDK------- 149
Query: 159 MSQRMPLIYVKLYFY--QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAK 216
PL L + Q+ + +A++ + HRD+ +N+L+ + H K+ DFG A+
Sbjct: 150 -EDGRPLELRDLLHFSSQVAQGMAFLASK-NCIHRDVAARNVLLT-NGHVAKIGDFGLAR 206
Query: 217 VLVKGEPNISYICSRY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPG 270
++ I +R + APE IF YT D+WS G +L E+ LG +PG
Sbjct: 207 DIMNDSNYIVKGNARLPVKWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 263
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 119/291 (40%), Gaps = 46/291 (15%)
Query: 61 PKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNR------------E 108
P I + E V+G G FG V+ L+ KK+ + NR E
Sbjct: 27 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTE 81
Query: 109 LQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 168
M+ HPNV+SL + E +VL Y+ H +++ + P +
Sbjct: 82 GIIMKDFSHPNVLSL----LGICLRSEGSPLVVLPYMK---HGDLRNFIRNETHNPTVKD 134
Query: 169 KLYF-YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 227
+ F Q+ + + ++ + V HRD+ +N +++ +K+ DFG A+ + E
Sbjct: 135 LIGFGLQVAKGMKFLASKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKE--FDS 190
Query: 228 ICSRYYRAPELIFGATE------YTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEI 280
+ ++ + + A E +T D+WS G +L EL+ G P +P + D V +
Sbjct: 191 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 250
Query: 281 IKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL 331
+ + + + P Y ++ WH + M P +LVSR+
Sbjct: 251 L--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 291
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 101/231 (43%), Gaps = 38/231 (16%)
Query: 73 VGHGSFGVVFQAKC-LETGEAVAIK------KVLQDKRYKN---RELQTMRLLDHPNVVS 122
+G GSFGVV + + +G+ V++ VL + RE+ M LDH N++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 123 LKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKH--HYKMSQRMPLIYVKLYFYQICRA 178
L + K +V E P + R+ KH H+ + + Y Q+
Sbjct: 80 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGT------LSRYAVQVAEG 127
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYR---- 234
+ Y+ + + HRD+ +NLL+ +K+ DFG + L + + + Y+ + +
Sbjct: 128 MGYLESKRFI-HRDLAARNLLLATRD-LVKIGDFGLMRALPQNDDH--YVMQEHRKVPFA 183
Query: 235 --APELIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEIIK 282
APE + T ++ A D W G L E+ GQ + G +G L +I K
Sbjct: 184 WCAPESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 233
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 119/291 (40%), Gaps = 46/291 (15%)
Query: 61 PKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNR------------E 108
P I + E V+G G FG V+ L+ KK+ + NR E
Sbjct: 25 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTE 79
Query: 109 LQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 168
M+ HPNV+SL + E +VL Y+ H +++ + P +
Sbjct: 80 GIIMKDFSHPNVLSL----LGICLRSEGSPLVVLPYMK---HGDLRNFIRNETHNPTVKD 132
Query: 169 KLYF-YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 227
+ F Q+ + + ++ + V HRD+ +N +++ +K+ DFG A+ + E + +
Sbjct: 133 LIGFGLQVAKGMKFLASKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKEFDSVH 190
Query: 228 ------ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEI 280
+ ++ L ++T D+WS G +L EL+ G P +P + D V +
Sbjct: 191 NKTGAKLPVKWMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 248
Query: 281 IKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL 331
+ + + + P Y ++ WH + M P +LVSR+
Sbjct: 249 L--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 289
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 119/291 (40%), Gaps = 46/291 (15%)
Query: 61 PKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNR------------E 108
P I + E V+G G FG V+ L+ KK+ + NR E
Sbjct: 27 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTE 81
Query: 109 LQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYV 168
M+ HPNV+SL + E +VL Y+ H +++ + P +
Sbjct: 82 GIIMKDFSHPNVLSL----LGICLRSEGSPLVVLPYMK---HGDLRNFIRNETHNPTVKD 134
Query: 169 KLYF-YQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 227
+ F Q+ + + ++ + V HRD+ +N +++ +K+ DFG A+ + E + +
Sbjct: 135 LIGFGLQVAKGMKFLASKKFV-HRDLAARNCMLD-EKFTVKVADFGLARDMYDKEFDSVH 192
Query: 228 ------ICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEI 280
+ ++ L ++T D+WS G +L EL+ G P +P + D V +
Sbjct: 193 NKTGAKLPVKWMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 250
Query: 281 IKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQKRMPPEAVDLVSRL 331
+ + + + P Y ++ WH + M P +LVSR+
Sbjct: 251 L--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 291
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 88/214 (41%), Gaps = 29/214 (13%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQD--KRYKNRELQTMRLL---DHPNVVSLKHCF 127
+G G+FG VF + VA+K + K + LQ R+L HPN+V L
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRL---I 178
Query: 128 FSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIG 187
T+K +Y +V+E V + + VK + A A +
Sbjct: 179 GVCTQKQPIY--IVMELVQGGDFLTF-----LRTEGARLRVKTLLQMVGDAAAGMEYLES 231
Query: 188 VC--HRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE- 244
C HRD+ +N LV + LK+ DFG + + E + Y S R + + A E
Sbjct: 232 KCCIHRDLAARNCLVT-EKNVLKISDFG----MSREEADGVYAASGGLRQVPVKWTAPEA 286
Query: 245 -----YTAAIDIWSAGCVLAELL-LGQPLFPGES 272
Y++ D+WS G +L E LG +P S
Sbjct: 287 LNYGRYSSESDVWSFGILLWETFSLGASPYPNLS 320
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 101/231 (43%), Gaps = 38/231 (16%)
Query: 73 VGHGSFGVVFQAKC-LETGEAVAIK------KVLQDKRYKN---RELQTMRLLDHPNVVS 122
+G GSFGVV + + +G+ V++ VL + RE+ M LDH N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 123 LKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKH--HYKMSQRMPLIYVKLYFYQICRA 178
L + K +V E P + R+ KH H+ + + Y Q+
Sbjct: 76 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGT------LSRYAVQVAEG 123
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYR---- 234
+ Y+ + + HRD+ +NLL+ +K+ DFG + L + + + Y+ + +
Sbjct: 124 MGYLESKRFI-HRDLAARNLLLATRD-LVKIGDFGLMRALPQNDDH--YVMQEHRKVPFA 179
Query: 235 --APELIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEIIK 282
APE + T ++ A D W G L E+ GQ + G +G L +I K
Sbjct: 180 WCAPESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 101/231 (43%), Gaps = 38/231 (16%)
Query: 73 VGHGSFGVVFQAKC-LETGEAVAIK------KVLQDKRYKN---RELQTMRLLDHPNVVS 122
+G GSFGVV + + +G+ V++ VL + RE+ M LDH N++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 123 LKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKH--HYKMSQRMPLIYVKLYFYQICRA 178
L + K +V E P + R+ KH H+ + + Y Q+
Sbjct: 80 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGT------LSRYAVQVAEG 127
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYR---- 234
+ Y+ + + HRD+ +NLL+ +K+ DFG + L + + + Y+ + +
Sbjct: 128 MGYLESKRFI-HRDLAARNLLLATRD-LVKIGDFGLMRALPQNDDH--YVMQEHRKVPFA 183
Query: 235 --APELIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEIIK 282
APE + T ++ A D W G L E+ GQ + G +G L +I K
Sbjct: 184 WCAPESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 233
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 101/231 (43%), Gaps = 38/231 (16%)
Query: 73 VGHGSFGVVFQAKC-LETGEAVAIK------KVLQDKRYKN---RELQTMRLLDHPNVVS 122
+G GSFGVV + + +G+ V++ VL + RE+ M LDH N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 123 LKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKH--HYKMSQRMPLIYVKLYFYQICRA 178
L + K +V E P + R+ KH H+ + + Y Q+
Sbjct: 76 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGT------LSRYAVQVAEG 123
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYR---- 234
+ Y+ + + HRD+ +NLL+ +K+ DFG + L + + + Y+ + +
Sbjct: 124 MGYLESKRFI-HRDLAARNLLLATRD-LVKIGDFGLMRALPQNDDH--YVMQEHRKVPFA 179
Query: 235 --APELIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEIIK 282
APE + T ++ A D W G L E+ GQ + G +G L +I K
Sbjct: 180 WCAPESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 73 VGHGSFGVVFQAKC-LETGEAVAIK------KVLQDKRYKN---RELQTMRLLDHPNVVS 122
+G GSFGVV + + +G+ V++ VL + RE+ M LDH N++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 123 LKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKH--HYKMSQRMPLIYVKLYFYQICRA 178
L + K +V E P + R+ KH H+ + + Y Q+
Sbjct: 86 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGT------LSRYAVQVAEG 133
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR----YYR 234
+ Y+ + + HRD+ +NLL+ +K+ DFG + L + + + R +
Sbjct: 134 MGYLESKRFI-HRDLAARNLLLATRD-LVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWC 191
Query: 235 APELIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEIIK 282
APE + T ++ A D W G L E+ GQ + G +G L +I K
Sbjct: 192 APESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 239
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 72/175 (41%), Gaps = 33/175 (18%)
Query: 169 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI--- 225
K Y+ + A+ IH G+ H D+KP N L+ LKL DFG A + ++
Sbjct: 158 KSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIV--DGMLKLIDFGIANQMQPDTTSVVKD 214
Query: 226 SYICSRYYRAPELIFGATE----------YTAAIDIWSAGCVLAELLLGQPLFPGESGVD 275
S + + Y PE I + + D+WS GC+L + G+ F
Sbjct: 215 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF------Q 268
Query: 276 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQ---KRMPPEAVDL 327
Q++ I L ++PN+ E +FP I + + KR P + + +
Sbjct: 269 QIINQISKLHA-------IIDPNH-EIEFPDIPEKDLQDVLKCCLKRDPKQRISI 315
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 72/175 (41%), Gaps = 33/175 (18%)
Query: 169 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI--- 225
K Y+ + A+ IH G+ H D+KP N L+ LKL DFG A + ++
Sbjct: 158 KSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIV--DGMLKLIDFGIANQMQPDTTSVVKD 214
Query: 226 SYICSRYYRAPELIFGATE----------YTAAIDIWSAGCVLAELLLGQPLFPGESGVD 275
S + + Y PE I + + D+WS GC+L + G+ F
Sbjct: 215 SQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF------Q 268
Query: 276 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQ---KRMPPEAVDL 327
Q++ I L ++PN+ E +FP I + + KR P + + +
Sbjct: 269 QIINQISKLHA-------IIDPNH-EIEFPDIPEKDLQDVLKCCLKRDPKQRISI 315
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 73 VGHGSFGVVFQAKC-LETGEAVAIK------KVLQDKRYKN---RELQTMRLLDHPNVVS 122
+G GSFGVV + + +G+ V++ VL + RE+ M LDH N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 123 LKHCFFSTTEKDELYLNLVLEYVP--ETVHRVIKH--HYKMSQRMPLIYVKLYFYQICRA 178
L + K +V E P + R+ KH H+ + + Y Q+
Sbjct: 76 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGT------LSRYAVQVAEG 123
Query: 179 LAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR----YYR 234
+ Y+ + + HRD+ +NLL+ +K+ DFG + L + + + R +
Sbjct: 124 MGYLESKRFI-HRDLAARNLLLATRD-LVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWC 181
Query: 235 APELIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPGESGVDQLVEIIK 282
APE + T ++ A D W G L E+ GQ + G +G L +I K
Sbjct: 182 APESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 7/104 (6%)
Query: 171 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 230
+ +QI + + Y+ + + HRD+ +N+LV ++K+ DFG ++ + + + +
Sbjct: 155 FAWQISQGMQYLAE-MSLVHRDLAARNILV-AEGRKMKISDFGLSRDVYEEDSXVKRSQG 212
Query: 231 RY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPG 270
R + A E +F YT D+WS G +L E++ LG +PG
Sbjct: 213 RIPVKWMAIESLFDHI-YTTQSDVWSFGVLLWEIVTLGGNPYPG 255
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 72/175 (41%), Gaps = 33/175 (18%)
Query: 169 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI--- 225
K Y+ + A+ IH G+ H D+KP N L+ LKL DFG A + ++
Sbjct: 158 KSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIV--DGMLKLIDFGIANQMQPDTTSVVKD 214
Query: 226 SYICSRYYRAPELIFGATE----------YTAAIDIWSAGCVLAELLLGQPLFPGESGVD 275
S + + Y PE I + + D+WS GC+L + G+ F
Sbjct: 215 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF------Q 268
Query: 276 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQ---KRMPPEAVDL 327
Q++ I L ++PN+ E +FP I + + KR P + + +
Sbjct: 269 QIINQISKLHA-------IIDPNH-EIEFPDIPEKDLQDVLKCCLKRDPKQRISI 315
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 94/211 (44%), Gaps = 41/211 (19%)
Query: 72 VVGHGSFGVVFQAKCLETGEAVAIKKVL----QDKRYKNRELQTMRLLDHPNVVSL-KHC 126
++GHG FG V++ L G VA+K+ Q E++T+ HP++VSL C
Sbjct: 46 LIGHGVFGKVYKG-VLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFC 104
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQIC----RALAYI 182
E++E+ L + +Y+ +K H S + +IC R L Y+
Sbjct: 105 ----DERNEMIL--IYKYMENGN---LKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYL 155
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAK-----------VLVKGEPNISYICSR 231
H T + HRD+K N+L++ K+ DFG +K +VKG + YI
Sbjct: 156 H-TRAIIHRDVKSINILLD-ENFVPKITDFGISKKGTELGQTHLXXVVKG--TLGYIDPE 211
Query: 232 YYRAPELIFGATEYTAAIDIWSAGCVLAELL 262
Y+ L T D++S G VL E+L
Sbjct: 212 YFIKGRL-------TEKSDVYSFGVVLFEVL 235
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 94/211 (44%), Gaps = 41/211 (19%)
Query: 72 VVGHGSFGVVFQAKCLETGEAVAIKKVL----QDKRYKNRELQTMRLLDHPNVVSL-KHC 126
++GHG FG V++ L G VA+K+ Q E++T+ HP++VSL C
Sbjct: 46 LIGHGVFGKVYKG-VLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFC 104
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQIC----RALAYI 182
E++E+ L + +Y+ +K H S + +IC R L Y+
Sbjct: 105 ----DERNEMIL--IYKYMENGN---LKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYL 155
Query: 183 HNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAK-----------VLVKGEPNISYICSR 231
H T + HRD+K N+L++ K+ DFG +K +VKG + YI
Sbjct: 156 H-TRAIIHRDVKSINILLD-ENFVPKITDFGISKKGTELDQTHLXXVVKG--TLGYIDPE 211
Query: 232 YYRAPELIFGATEYTAAIDIWSAGCVLAELL 262
Y+ L T D++S G VL E+L
Sbjct: 212 YFIKGRL-------TEKSDVYSFGVVLFEVL 235
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 72/175 (41%), Gaps = 33/175 (18%)
Query: 169 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI--- 225
K Y+ + A+ IH G+ H D+KP N L+ LKL DFG A + ++
Sbjct: 111 KSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIV--DGMLKLIDFGIANQMQPDTTSVVKD 167
Query: 226 SYICSRYYRAPELIFGATE----------YTAAIDIWSAGCVLAELLLGQPLFPGESGVD 275
S + + Y PE I + + D+WS GC+L + G+ F
Sbjct: 168 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF------Q 221
Query: 276 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQ---KRMPPEAVDL 327
Q++ I L ++PN+ E +FP I + + KR P + + +
Sbjct: 222 QIINQISKLHA-------IIDPNH-EIEFPDIPEKDLQDVLKCCLKRDPKQRISI 268
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 33/175 (18%)
Query: 169 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI--- 225
K Y+ + A+ IH G+ H D+KP N L+ LKL DFG A + ++
Sbjct: 130 KSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIV--DGMLKLIDFGIANQMQPDTTSVVKD 186
Query: 226 SYICSRYYRAPELIFGATE----------YTAAIDIWSAGCVLAELLLGQPLFPGESGVD 275
S + + Y PE I + + D+WS GC+L + G+ P + ++
Sbjct: 187 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIIN 244
Query: 276 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQ---KRMPPEAVDL 327
Q+ ++ ++ +PN+ E +FP I + + KR P + + +
Sbjct: 245 QISKLHAII-----------DPNH-EIEFPDIPEKDLQDVLKCCLKRDPKQRISI 287
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 96/217 (44%), Gaps = 35/217 (16%)
Query: 70 ERVVGHGSFGVVFQAKCLETGEAV--AIKKVLQ-----DKRYKNRELQTM-RLLDHPNVV 121
+ V+G G+FG V +A+ + G + AIK++ + D R EL+ + +L HPN++
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVK------------ 169
+L E YL L +EY P ++ + P +
Sbjct: 90 NL----LGACEH-RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 170 LYFY-QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAK---VLVKGEPNI 225
L+F + R + Y+ + HRD+ +N+LV + K+ DFG ++ V VK +
Sbjct: 145 LHFAADVARGMDYLSQKQFI-HRDLAARNILVG-ENYVAKIADFGLSRGQEVYVK--KTM 200
Query: 226 SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELL 262
+ R+ L + YT D+WS G +L E++
Sbjct: 201 GRLPVRWMAIESLNYSV--YTTNSDVWSYGVLLWEIV 235
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 7/104 (6%)
Query: 171 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 230
+ +QI + + Y+ + + HRD+ +N+LV ++K+ DFG ++ + + + +
Sbjct: 155 FAWQISQGMQYLAE-MKLVHRDLAARNILV-AEGRKMKISDFGLSRDVYEEDSXVKRSQG 212
Query: 231 RY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPG 270
R + A E +F YT D+WS G +L E++ LG +PG
Sbjct: 213 RIPVKWMAIESLFDHI-YTTQSDVWSFGVLLWEIVTLGGNPYPG 255
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 96/217 (44%), Gaps = 35/217 (16%)
Query: 70 ERVVGHGSFGVVFQAKCLETGEAV--AIKKVLQ-----DKRYKNRELQTM-RLLDHPNVV 121
+ V+G G+FG V +A+ + G + AIK++ + D R EL+ + +L HPN++
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVK------------ 169
+L E YL L +EY P ++ + P +
Sbjct: 80 NL----LGACEH-RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 170 LYFY-QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAK---VLVKGEPNI 225
L+F + R + Y+ + HRD+ +N+LV + K+ DFG ++ V VK +
Sbjct: 135 LHFAADVARGMDYLSQKQFI-HRDLAARNILVG-ENYVAKIADFGLSRGQEVYVK--KTM 190
Query: 226 SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELL 262
+ R+ L + YT D+WS G +L E++
Sbjct: 191 GRLPVRWMAIESLNYSV--YTTNSDVWSYGVLLWEIV 225
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 33/175 (18%)
Query: 169 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI--- 225
K Y+ + A+ IH G+ H D+KP N L+ LKL DFG A + ++
Sbjct: 110 KSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIV--DGMLKLIDFGIANQMQPDTTSVVKD 166
Query: 226 SYICSRYYRAPELIFGATE----------YTAAIDIWSAGCVLAELLLGQPLFPGESGVD 275
S + + Y PE I + + D+WS GC+L + G+ P + ++
Sbjct: 167 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIIN 224
Query: 276 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQ---KRMPPEAVDL 327
Q+ ++ ++ +PN+ E +FP I + + KR P + + +
Sbjct: 225 QISKLHAII-----------DPNH-EIEFPDIPEKDLQDVLKCCLKRDPKQRISI 267
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 72/175 (41%), Gaps = 33/175 (18%)
Query: 169 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI--- 225
K Y+ + A+ IH G+ H D+KP N L+ LKL DFG A + ++
Sbjct: 114 KSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIV--DGMLKLIDFGIANQMQPDTTSVVKD 170
Query: 226 SYICSRYYRAPELIFGATE----------YTAAIDIWSAGCVLAELLLGQPLFPGESGVD 275
S + + Y PE I + + D+WS GC+L + G+ F
Sbjct: 171 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF------Q 224
Query: 276 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQ---KRMPPEAVDL 327
Q++ I L ++PN+ E +FP I + + KR P + + +
Sbjct: 225 QIINQISKLHA-------IIDPNH-EIEFPDIPEKDLQDVLKCCLKRDPKQRISI 271
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 7/104 (6%)
Query: 171 YFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICS 230
+ +QI + + Y+ + + HRD+ +N+LV ++K+ DFG ++ + + + +
Sbjct: 155 FAWQISQGMQYLAE-MKLVHRDLAARNILV-AEGRKMKISDFGLSRDVYEEDSYVKRSQG 212
Query: 231 RY---YRAPELIFGATEYTAAIDIWSAGCVLAELL-LGQPLFPG 270
R + A E +F YT D+WS G +L E++ LG +PG
Sbjct: 213 RIPVKWMAIESLFDHI-YTTQSDVWSFGVLLWEIVTLGGNPYPG 255
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 74/175 (42%), Gaps = 33/175 (18%)
Query: 169 KLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNI--- 225
K Y+ + A+ IH G+ H D+KP N L+ LKL DFG A + +
Sbjct: 130 KSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIV--DGMLKLIDFGIANQMQPDXXXVVKD 186
Query: 226 SYICSRYYRAPELIFGATE----------YTAAIDIWSAGCVLAELLLGQPLFPGESGVD 275
S + + Y PE I + + D+WS GC+L + G+ P + ++
Sbjct: 187 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIIN 244
Query: 276 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFQ---KRMPPEAVDL 327
Q+ ++ ++ +PN+ E +FP I + + KR P + + +
Sbjct: 245 QISKLHAII-----------DPNH-EIEFPDIPEKDLQDVLKCCLKRDPKQRISI 287
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 79/180 (43%), Gaps = 20/180 (11%)
Query: 55 GGKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQ------DKRYKNRE 108
G + + T + +G G FG VF+ G AIK+ + D++ RE
Sbjct: 1 GAMGMKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALRE 60
Query: 109 LQTMRLL-DHPNVVSLKHCFFSTTEKDELYLNLVLEYV-PETVHRVIKHHYKMSQRMPLI 166
+ +L H +VV +FS +D+ ++ + EY ++ I +Y++
Sbjct: 61 VYAHAVLGQHSHVVR----YFSAWAEDD-HMLIQNEYCNGGSLADAISENYRIMSYFKEA 115
Query: 167 YVKLYFYQICRALAYIHNTIGVCHRDIKPQNLLV------NPHTHQLKLCDFGSAKVLVK 220
+K Q+ R L YIH ++ + H DIKP N+ + N + + D+ S KV+ K
Sbjct: 116 ELKDLLLQVGRGLRYIH-SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFK 174
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 8/152 (5%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHC 126
Y R +G GSFG ++ + +GE VAIK ++ +++ V +
Sbjct: 11 YRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQGGVGIPSI 70
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTI 186
+ E D Y +V+E + ++ + S++ L V L Q+ + YIH+
Sbjct: 71 KWCGAEGD--YNVMVMELLGPSLEDLFNF---CSRKFSLKTVLLLADQMISRIEYIHSK- 124
Query: 187 GVCHRDIKPQNLL--VNPHTHQLKLCDFGSAK 216
HRD+KP N L + + + + DFG AK
Sbjct: 125 NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 35/217 (16%)
Query: 70 ERVVGHGSFGVVFQAKCLETGEAV--AIKKVLQ-----DKRYKNRELQTM-RLLDHPNVV 121
+ V+G G+FG V +A+ + G + AIK++ + D R EL+ + +L HPN++
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVK------------ 169
+L E YL L +EY P ++ + P +
Sbjct: 87 NL----LGACEH-RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 170 LYFY-QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAK---VLVKGEPNI 225
L+F + R + Y+ + HR++ +N+LV + K+ DFG ++ V VK +
Sbjct: 142 LHFAADVARGMDYLSQKQFI-HRNLAARNILVG-ENYVAKIADFGLSRGQEVYVK--KTM 197
Query: 226 SYICSRYYRAPELIFGATEYTAAIDIWSAGCVLAELL 262
+ R+ L + YT D+WS G +L E++
Sbjct: 198 GRLPVRWMAIESLNYSV--YTTNSDVWSYGVLLWEIV 232
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 20/162 (12%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQ------DKRYKNRELQTMRLL-DHPNVVSLKH 125
+G G FG VF+ G AIK+ + D++ RE+ +L H +VV
Sbjct: 17 IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVR--- 73
Query: 126 CFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN 184
+FS +D+ ++ + EY ++ I +Y++ +K Q+ R L YIH
Sbjct: 74 -YFSAWAEDD-HMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH- 130
Query: 185 TIGVCHRDIKPQNLLV------NPHTHQLKLCDFGSAKVLVK 220
++ + H DIKP N+ + N + + D+ S KV+ K
Sbjct: 131 SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFK 172
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 24/164 (14%)
Query: 73 VGHGSFGVVFQAKCLE--TGEAVAIKKVLQ------DKRYKNRELQTMRLL-DHPNVVSL 123
+G G FG VF KC++ G AIK+ + D++ RE+ +L H +VV
Sbjct: 15 IGSGEFGSVF--KCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVR- 71
Query: 124 KHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
+FS +D+ ++ + EY ++ I +Y++ +K Q+ R L YI
Sbjct: 72 ---YFSAWAEDD-HMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 127
Query: 183 HNTIGVCHRDIKPQNLLV------NPHTHQLKLCDFGSAKVLVK 220
H ++ + H DIKP N+ + N + + D+ S KV+ K
Sbjct: 128 H-SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFK 170
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 20/162 (12%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQ------DKRYKNRELQTMRLL-DHPNVVSLKH 125
+G G FG VF+ G AIK+ + D++ RE+ +L H +VV
Sbjct: 17 IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVR--- 73
Query: 126 CFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHN 184
+FS +D+ ++ + EY ++ I +Y++ +K Q+ R L YIH
Sbjct: 74 -YFSAWAEDD-HMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH- 130
Query: 185 TIGVCHRDIKPQNLLV------NPHTHQLKLCDFGSAKVLVK 220
++ + H DIKP N+ + N + + D+ S KV+ K
Sbjct: 131 SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFK 172
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 97/222 (43%), Gaps = 30/222 (13%)
Query: 71 RVVGHGSFGVVFQAKCLETGEA---VAIKKVLQDKRYKN------RELQTMRLLDHPNVV 121
R++G G FG V +A+ + + VA+K + D + RE M+ DHP+V
Sbjct: 29 RMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVA 88
Query: 122 SLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQR-------MPLIYVKLYFYQ 174
L + K L + +V+ +P H + H + ++ R +PL + +
Sbjct: 89 KLVGVSLRSRAKGRLPIPMVI--LPFMKHGDL-HAFLLASRIGENPFNLPLQTLVRFMVD 145
Query: 175 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLC--DFGSAKVLVKGEPNISYICSRY 232
I + Y+ ++ HRD+ +N ++ + +C DFG ++ + G+ S+
Sbjct: 146 IACGMEYL-SSRNFIHRDLAARNCML---AEDMTVCVADFGLSRKIYSGDYYRQGCASKL 201
Query: 233 ---YRAPELIFGATEYTAAIDIWSAGCVLAELLL-GQPLFPG 270
+ A E + YT D+W+ G + E++ GQ + G
Sbjct: 202 PVKWLALESL-ADNLYTVHSDVWAFGVTMWEIMTRGQTPYAG 242
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 8/152 (5%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHC 126
Y R +G GSFG ++ + GE VAIK ++ +++ V +
Sbjct: 11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTI 70
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTI 186
+ E D Y +V+E + ++ + S++ L V L Q+ + YIH+
Sbjct: 71 RWCGAEGD--YNVMVMELLGPSLEDLFNF---CSRKFSLKTVLLLADQMISRIEYIHSK- 124
Query: 187 GVCHRDIKPQNLL--VNPHTHQLKLCDFGSAK 216
HRD+KP N L + + + + DFG AK
Sbjct: 125 NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 8/152 (5%)
Query: 67 YMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHC 126
Y R +G GSFG ++ + GE VAIK ++ +++ V +
Sbjct: 9 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTI 68
Query: 127 FFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTI 186
+ E D Y +V+E + ++ + S++ L V L Q+ + YIH+
Sbjct: 69 RWCGAEGD--YNVMVMELLGPSLEDLFNF---CSRKFSLKTVLLLADQMISRIEYIHSK- 122
Query: 187 GVCHRDIKPQNLL--VNPHTHQLKLCDFGSAK 216
HRD+KP N L + + + + DFG AK
Sbjct: 123 NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 154
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 98/227 (43%), Gaps = 54/227 (23%)
Query: 70 ERVVGHGSFGVVFQAKCL----ETGEAVAIKKVLQD-----KRYKNRELQTMRLLDHPNV 120
+R +G G+FG VF A+C E + + K L+D ++ +RE + + L H ++
Sbjct: 18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHI 77
Query: 121 VSLKHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHH----YKMSQRMP--------LIY 167
V + E D L +V EY+ +++ ++ H M++ P +++
Sbjct: 78 VKF---YGVCVEGDPLI--MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLH 132
Query: 168 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 227
+ QI + Y+ + V HRD+ +N LV + +K+ DFG ++
Sbjct: 133 IA---QQIAAGMVYLASQHFV-HRDLATRNCLVGENL-LVKIGDFGMSR---------DV 178
Query: 228 ICSRYYRA------------PELIFGATEYTAAIDIWSAGCVLAELL 262
+ YYR PE I ++T D+WS G VL E+
Sbjct: 179 YSTDYYRVGGHTMLPIRWMPPESIM-YRKFTTESDVWSLGVVLWEIF 224
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 97/238 (40%), Gaps = 41/238 (17%)
Query: 53 TIGGKNGQPKQTISYMAERV-----VGHGSFGVVFQAKCLETGEAVAIKKVL-QDKR--Y 104
T G +G P +A ++ VG G +G V++ GE VA+K +D++ +
Sbjct: 20 TSGSGSGLPFLVQRTVARQITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSRDEKSWF 77
Query: 105 KNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIK-HHYKMSQRM 163
+ EL +L H N++ T+ L L+ Y H + + Y +
Sbjct: 78 RETELYNTVMLRHENILGFIASDM-TSRHSSTQLWLITHY-----HEMGSLYDYLQLTTL 131
Query: 164 PLIYVKLYFYQICRALAYIHNTI-------GVCHRDIKPQNLLVNPHTHQLKLCDFGSA- 215
+ I LA++H I + HRD+K +N+LV + Q + D G A
Sbjct: 132 DTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNG-QCCIADLGLAV 190
Query: 216 -------KVLVKGEPNISYICSRYYRAPELI-----FGATEYTAAIDIWSAGCVLAEL 261
++ V P + ++ Y APE++ + +DIW+ G VL E+
Sbjct: 191 MHSQSTNQLDVGNNPRVG---TKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 94/223 (42%), Gaps = 50/223 (22%)
Query: 73 VGHGSFGVVFQAKCL----ETGEAVAIKKVLQD-----KRYKNRELQTMRLLDHPNVVSL 123
+G G+FG VF A+C E + + K L++ ++ RE + + +L H ++V
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR- 107
Query: 124 KHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRM---------PLIYVKLYFY 173
FF + L +V EY+ ++R ++ H ++ + PL +L
Sbjct: 108 ---FFGVCTEGRPLL-MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 163
Query: 174 --QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 231
Q+ + Y+ + HRD+ +N LV +K+ DFG ++ + +
Sbjct: 164 ASQVAAGMVYLAG-LHFVHRDLATRNCLVG-QGLVVKIGDFGMSRDIYS---------TD 212
Query: 232 YYRA------------PELIFGATEYTAAIDIWSAGCVLAELL 262
YYR PE I ++T D+WS G VL E+
Sbjct: 213 YYRVGGRTMLPIRWMPPESIL-YRKFTTESDVWSFGVVLWEIF 254
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 92/235 (39%), Gaps = 53/235 (22%)
Query: 70 ERVVGHGSFGVVFQAKCLETGEA-----VAIKKV----LQDKRYKNRELQTMRLLDHPNV 120
+R +G G+FG VF A+C VA+K + L ++ RE + + L H ++
Sbjct: 20 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHI 79
Query: 121 VSLKHCFFSTTEKDELYLNLVLEYV-------------PETVHRVIKHHYKMSQRMPLIY 167
V F D L +V EY+ P+ + V + + L
Sbjct: 80 VK-----FYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQ 134
Query: 168 VKLYFYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISY 227
+ QI + Y+ + V HRD+ +N LV + +K+ DFG ++
Sbjct: 135 MLHIASQIASGMVYLASQHFV-HRDLATRNCLVGANL-LVKIGDFGMSR---------DV 183
Query: 228 ICSRYYRA------------PELIFGATEYTAAIDIWSAGCVLAELLL--GQPLF 268
+ YYR PE I ++T D+WS G +L E+ QP F
Sbjct: 184 YSTDYYRVGGHTMLPIRWMPPESIM-YRKFTTESDVWSFGVILWEIFTYGKQPWF 237
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 36/213 (16%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVL-QDKR--YKNRELQTMRLLDHPNVVSLKHCFFS 129
VG G +G V++ GE VA+K +D++ ++ EL +L H N++
Sbjct: 16 VGKGRYGEVWRGSW--QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDM- 72
Query: 130 TTEKDELYLNLVLEYVPETVHRVIK-HHYKMSQRMPLIYVKLYFYQICRALAYIHNTI-- 186
T+ L L+ Y H + + Y + + I LA++H I
Sbjct: 73 TSRHSSTQLWLITHY-----HEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 187 -----GVCHRDIKPQNLLVNPHTHQLKLCDFGSA--------KVLVKGEPNISYICSRYY 233
+ HRD+K +N+LV + Q + D G A ++ V P + ++ Y
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNG-QCCIADLGLAVMHSQSTNQLDVGNNPRVG---TKRY 183
Query: 234 RAPELI-----FGATEYTAAIDIWSAGCVLAEL 261
APE++ + +DIW+ G VL E+
Sbjct: 184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 36/213 (16%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVL-QDKR--YKNRELQTMRLLDHPNVVSLKHCFFS 129
VG G +G V++ GE VA+K +D++ ++ EL +L H N++
Sbjct: 16 VGKGRYGEVWRGSW--QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDM- 72
Query: 130 TTEKDELYLNLVLEYVPETVHRVIK-HHYKMSQRMPLIYVKLYFYQICRALAYIHNTI-- 186
T+ L L+ Y H + + Y + + I LA++H I
Sbjct: 73 TSRHSSTQLWLITHY-----HEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 187 -----GVCHRDIKPQNLLVNPHTHQLKLCDFGSA--------KVLVKGEPNISYICSRYY 233
+ HRD+K +N+LV + Q + D G A ++ V P + ++ Y
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNG-QCCIADLGLAVMHSQSTNQLDVGNNPRVG---TKRY 183
Query: 234 RAPELI-----FGATEYTAAIDIWSAGCVLAEL 261
APE++ + +DIW+ G VL E+
Sbjct: 184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 103/241 (42%), Gaps = 43/241 (17%)
Query: 51 VTTIGGKNGQP---KQTI--SYMAERVVGHGSFGVVFQAKCLETGEAVAIK---KVLQDK 102
+TT G +G P ++TI + + + +G G FG V++ K GE VA+K +
Sbjct: 23 MTTSGSGSGLPLLVQRTIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERS 80
Query: 103 RYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDE---LYLNLVLEYVPE-TVHRVIKHHYK 158
++ E+ +L H N++ F + KD L LV +Y ++ + +
Sbjct: 81 WFREAEIYQTVMLRHENILG----FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTV 136
Query: 159 MSQRMPLIYVKLYFYQICRALAYIHNTI-------GVCHRDIKPQNLLVNPHTHQLKLCD 211
+ M +KL LA++H I + HRD+K +N+LV + + D
Sbjct: 137 TVEGM----IKLAL-STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG-TCCIAD 190
Query: 212 FG------SAKVLVKGEPNISYICSRYYRAPELIFGAT-----EYTAAIDIWSAGCVLAE 260
G SA + PN + ++ Y APE++ + E DI++ G V E
Sbjct: 191 LGLAVRHDSATDTIDIAPN-HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE 249
Query: 261 L 261
+
Sbjct: 250 I 250
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 94/223 (42%), Gaps = 50/223 (22%)
Query: 73 VGHGSFGVVFQAKCL----ETGEAVAIKKVLQD-----KRYKNRELQTMRLLDHPNVVSL 123
+G G+FG VF A+C E + + K L++ ++ RE + + +L H ++V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR- 78
Query: 124 KHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRM---------PLIYVKLYFY 173
FF + L +V EY+ ++R ++ H ++ + PL +L
Sbjct: 79 ---FFGVCTEGRPLL-MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 134
Query: 174 --QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 231
Q+ + Y+ + HRD+ +N LV +K+ DFG ++ + +
Sbjct: 135 ASQVAAGMVYLAG-LHFVHRDLATRNCLVG-QGLVVKIGDFGMSRDIYS---------TD 183
Query: 232 YYRA------------PELIFGATEYTAAIDIWSAGCVLAELL 262
YYR PE I ++T D+WS G VL E+
Sbjct: 184 YYRVGGRTMLPIRWMPPESIL-YRKFTTESDVWSFGVVLWEIF 225
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 94/223 (42%), Gaps = 50/223 (22%)
Query: 73 VGHGSFGVVFQAKCL----ETGEAVAIKKVLQD-----KRYKNRELQTMRLLDHPNVVSL 123
+G G+FG VF A+C E + + K L++ ++ RE + + +L H ++V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR- 84
Query: 124 KHCFFSTTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRM---------PLIYVKLYFY 173
FF + L +V EY+ ++R ++ H ++ + PL +L
Sbjct: 85 ---FFGVCTEGRPLL-MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 140
Query: 174 --QICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSR 231
Q+ + Y+ + HRD+ +N LV +K+ DFG ++ + +
Sbjct: 141 ASQVAAGMVYLAG-LHFVHRDLATRNCLVG-QGLVVKIGDFGMSRDIYS---------TD 189
Query: 232 YYRA------------PELIFGATEYTAAIDIWSAGCVLAELL 262
YYR PE I ++T D+WS G VL E+
Sbjct: 190 YYRVGGRTMLPIRWMPPESIL-YRKFTTESDVWSFGVVLWEIF 231
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 71/158 (44%), Gaps = 14/158 (8%)
Query: 65 ISYMAERVVGHGSFGVVFQAKCLETGEAVAIK--KVLQDKRYKNRELQTMRLLDHPNVVS 122
+ Y R +G GSFGV+F+ L + VAIK D E +T +LL
Sbjct: 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLL--AGCTG 67
Query: 123 LKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
+ + ++ E L+ LV++ + ++ ++ ++ + V + Q+ + I
Sbjct: 68 IPNVYYFGQEG--LHNVLVIDLLGPSLEDLLD---LCGRKFSVKTVAMAAKQMLARVQSI 122
Query: 183 HNTIGVCHRDIKPQNLLV----NPHTHQLKLCDFGSAK 216
H + +RDIKP N L+ + + + + + DFG K
Sbjct: 123 HEK-SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 71/158 (44%), Gaps = 14/158 (8%)
Query: 65 ISYMAERVVGHGSFGVVFQAKCLETGEAVAIK--KVLQDKRYKNRELQTMRLLDHPNVVS 122
+ Y R +G GSFGV+F+ L + VAIK D E +T +LL
Sbjct: 9 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLL--AGCTG 66
Query: 123 LKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYI 182
+ + ++ E L+ LV++ + ++ ++ ++ + V + Q+ + I
Sbjct: 67 IPNVYYFGQEG--LHNVLVIDLLGPSLEDLLD---LCGRKFSVKTVAMAAKQMLARVQSI 121
Query: 183 HNTIGVCHRDIKPQNLLV----NPHTHQLKLCDFGSAK 216
H + +RDIKP N L+ + + + + + DFG K
Sbjct: 122 HEK-SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 158
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 103/241 (42%), Gaps = 43/241 (17%)
Query: 51 VTTIGGKNGQP---KQTI--SYMAERVVGHGSFGVVFQAKCLETGEAVAIK---KVLQDK 102
+TT G +G P ++TI + + + +G G FG V++ K GE VA+K +
Sbjct: 10 MTTSGSGSGLPLLVQRTIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERS 67
Query: 103 RYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDE---LYLNLVLEYVPE-TVHRVIKHHYK 158
++ E+ +L H N++ F + KD L LV +Y ++ + +
Sbjct: 68 WFREAEIYQTVMLRHENILG----FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTV 123
Query: 159 MSQRMPLIYVKLYFYQICRALAYIHNTI-------GVCHRDIKPQNLLVNPHTHQLKLCD 211
+ M +KL LA++H I + HRD+K +N+LV + + D
Sbjct: 124 TVEGM----IKLAL-STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG-TCCIAD 177
Query: 212 FG------SAKVLVKGEPNISYICSRYYRAPELIFGAT-----EYTAAIDIWSAGCVLAE 260
G SA + PN + ++ Y APE++ + E DI++ G V E
Sbjct: 178 LGLAVRHDSATDTIDIAPN-HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE 236
Query: 261 L 261
+
Sbjct: 237 I 237
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 34.7 bits (78), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
Query: 174 QICRALAYIHNTIGVCHRDIKPQNLLVN-PHT---HQLKLCDFGSAKVLVKGE 222
Q+ + Y+H T + +RD+KP+N LV P T H + + DFG AK + E
Sbjct: 108 QLITRMEYVH-TKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDPE 159
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 34.7 bits (78), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Query: 174 QICRALAYIHNTIGVCHRDIKPQNLLV----NPHTHQLKLCDFGSAKVLVKGE 222
Q+ + Y+H+ + +RD+KP+N L+ N H + + DFG AK + E
Sbjct: 105 QLLSRMEYVHSK-NLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPE 156
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 88/213 (41%), Gaps = 36/213 (16%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIK---KVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFS 129
+G G FG V++ K GE VA+K + ++ E+ +L H N++ F +
Sbjct: 17 IGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILG----FIA 70
Query: 130 TTEKDE---LYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTI 186
KD L LV +Y + Y ++ +I + L LA++H I
Sbjct: 71 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE-GMIKLAL---STASGLAHLHMEI 126
Query: 187 -------GVCHRDIKPQNLLVNPHTHQLKLCDFG------SAKVLVKGEPNISYICSRYY 233
+ HRD+K +N+LV + + D G SA + PN + ++ Y
Sbjct: 127 VGTQGKPAIAHRDLKSKNILVKKNG-TCCIADLGLAVRHDSATDTIDIAPN-HRVGTKRY 184
Query: 234 RAPELIFGAT-----EYTAAIDIWSAGCVLAEL 261
APE++ + E DI++ G V E+
Sbjct: 185 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 88/213 (41%), Gaps = 36/213 (16%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIK---KVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFS 129
+G G FG V++ K GE VA+K + ++ E+ +L H N++ F +
Sbjct: 14 IGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILG----FIA 67
Query: 130 TTEKDE---LYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTI 186
KD L LV +Y + Y ++ +I + L LA++H I
Sbjct: 68 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE-GMIKLAL---STASGLAHLHMEI 123
Query: 187 -------GVCHRDIKPQNLLVNPHTHQLKLCDFG------SAKVLVKGEPNISYICSRYY 233
+ HRD+K +N+LV + + D G SA + PN + ++ Y
Sbjct: 124 VGTQGKPAIAHRDLKSKNILVKKNG-TCCIADLGLAVRHDSATDTIDIAPN-HRVGTKRY 181
Query: 234 RAPELIFGAT-----EYTAAIDIWSAGCVLAEL 261
APE++ + E DI++ G V E+
Sbjct: 182 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 89/214 (41%), Gaps = 38/214 (17%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIK---KVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFS 129
+G G FG V++ K GE VA+K + ++ E+ +L H N++ F +
Sbjct: 12 IGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILG----FIA 65
Query: 130 TTEKDE---LYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNT 185
KD L LV +Y ++ + + + M +KL LA++H
Sbjct: 66 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM----IKLAL-STASGLAHLHME 120
Query: 186 I-------GVCHRDIKPQNLLVNPHTHQLKLCDFG------SAKVLVKGEPNISYICSRY 232
I + HRD+K +N+LV + + D G SA + PN + ++
Sbjct: 121 IVGTQGKPAIAHRDLKSKNILVKKNG-TCCIADLGLAVRHDSATDTIDIAPN-HRVGTKR 178
Query: 233 YRAPELIFGAT-----EYTAAIDIWSAGCVLAEL 261
Y APE++ + E DI++ G V E+
Sbjct: 179 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 89/214 (41%), Gaps = 38/214 (17%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIK---KVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFS 129
+G G FG V++ K GE VA+K + ++ E+ +L H N++ F +
Sbjct: 11 IGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILG----FIA 64
Query: 130 TTEKDE---LYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNT 185
KD L LV +Y ++ + + + M +KL LA++H
Sbjct: 65 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM----IKLAL-STASGLAHLHME 119
Query: 186 I-------GVCHRDIKPQNLLVNPHTHQLKLCDFG------SAKVLVKGEPNISYICSRY 232
I + HRD+K +N+LV + + D G SA + PN + ++
Sbjct: 120 IVGTQGKPAIAHRDLKSKNILVKKNG-TCCIADLGLAVRHDSATDTIDIAPN-HRVGTKR 177
Query: 233 YRAPELIFGAT-----EYTAAIDIWSAGCVLAEL 261
Y APE++ + E DI++ G V E+
Sbjct: 178 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|4AX8|A Chain A, Medium Resolution Structure Of The Bifunctional Kinase-
Methyltransferase Wbdd
Length = 569
Score = 32.0 bits (71), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 175 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGS 214
+ R+LA + G H D++P N++V+ H +L DFGS
Sbjct: 348 LLRSLAALEKQ-GFWHDDVRPWNVMVDARQHA-RLIDFGS 385
>pdb|4AZS|A Chain A, High Resolution (2.2 A) Crystal Structure Of Wbdd.
pdb|4AZT|A Chain A, Co-Crystal Structure Of Wbdd And Kinase Inhibitor
Ly294002.
pdb|4AZV|A Chain A, Co-crystal Structure Of Wbdd And Kinase Inhibitor
Gw435821x
Length = 569
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 175 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGS 214
+ R+LA + G H D++P N++V+ H +L DFGS
Sbjct: 348 LLRSLAALEKQ-GFWHDDVRPWNVMVDARQHA-RLIDFGS 385
>pdb|4AZW|A Chain A, Crystal Structure Of Monomeric Wbdd
Length = 471
Score = 31.6 bits (70), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 175 ICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGS 214
+ R+LA + G H D++P N++V+ H +L DFGS
Sbjct: 348 LLRSLAALEKK-GFWHDDVRPWNVMVDARQHA-RLIDFGS 385
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 16/164 (9%)
Query: 66 SYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQT--MRLLDHPNVVSL 123
++ + +G G+FG + K L T E VAIK R L+ + L + +
Sbjct: 10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQ 69
Query: 124 KHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQR-MPLIYVKLYFYQICRALAYI 182
+ F + Y +VLE + ++ + + + R L V + Q+ + Y+
Sbjct: 70 VYYFGPCGK----YNAMVLELLGPSLEDL----FDLCDRTFSLKTVLMIAIQLISRMEYV 121
Query: 183 HNTIGVCHRDIKPQNLLV----NPHTHQLKLCDFGSAKVLVKGE 222
H+ + +RD+KP+N L+ N + + DFG AK + E
Sbjct: 122 HSK-NLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYIDPE 164
>pdb|2GN4|A Chain A, Crystal Structure Of Udp-Glcnac Inverting 4,6-Dehydratase
In Complex With Nadph And Udp-Glcnac
pdb|2GN4|B Chain B, Crystal Structure Of Udp-Glcnac Inverting 4,6-Dehydratase
In Complex With Nadph And Udp-Glcnac
pdb|2GN6|A Chain A, Crystal Structure Of Udp-Glcnac Inverting 4,6-Dehydratase
In Complex With Nadp And Udp-Glcnac
pdb|2GN6|B Chain B, Crystal Structure Of Udp-Glcnac Inverting 4,6-Dehydratase
In Complex With Nadp And Udp-Glcnac
pdb|2GN8|A Chain A, Crystal Structure Of Udp-Glcnac Inverting 4,6-Dehydratase
In Complex With Nadp And Udp
pdb|2GN8|B Chain B, Crystal Structure Of Udp-Glcnac Inverting 4,6-Dehydratase
In Complex With Nadp And Udp
pdb|2GN9|A Chain A, Crystal Structure Of Udp-glcnac Inverting 4,6-dehydratase
In Complex With Nadp And Udp-glc
pdb|2GN9|B Chain B, Crystal Structure Of Udp-glcnac Inverting 4,6-dehydratase
In Complex With Nadp And Udp-glc
pdb|2GNA|A Chain A, Crystal Structure Of Udp-Glcnac Inverting 4,6-Dehydratase
In Complex With Nadp And Udp-Gal
pdb|2GNA|B Chain B, Crystal Structure Of Udp-Glcnac Inverting 4,6-Dehydratase
In Complex With Nadp And Udp-Gal
Length = 344
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 8/96 (8%)
Query: 74 GHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEK 133
G GSFG F K L+T A KK++ R + ++ + + P + FF +
Sbjct: 29 GTGSFGKCFVRKVLDTTNA---KKIIVYSRDELKQSEMAMEFNDP-----RMRFFIGDVR 80
Query: 134 DELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVK 169
D LN LE V +H H +++ PL +K
Sbjct: 81 DLERLNYALEGVDICIHAAALKHVPIAEYNPLECIK 116
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 91/211 (43%), Gaps = 32/211 (15%)
Query: 73 VGHGSFGVVFQAKCLETGEAVAIKKVLQDKR---YKNRELQTMRLLDHPNVVS-LKHCFF 128
+G G +G V+ K GE VA+K + ++ E+ L+ H N++ +
Sbjct: 45 IGKGRYGEVWMGKW--RGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIK 102
Query: 129 STTEKDELYLNLVLEYVPE-TVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTI- 186
T +LYL + +Y +++ +K ++ M +KL + + L ++H I
Sbjct: 103 GTGSWTQLYL--ITDYHENGSLYDYLKSTTLDAKSM----LKLAYSSVS-GLCHLHTEIF 155
Query: 187 ------GVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGE-----PNISYICSRYYRA 235
+ HRD+K +N+LV + + D G A + P + + ++ Y
Sbjct: 156 STQGKPAIAHRDLKSKNILVKKNG-TCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMP 214
Query: 236 PELI---FGATEYTAAI--DIWSAGCVLAEL 261
PE++ + + I D++S G +L E+
Sbjct: 215 PEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3Q8D|A Chain A, E. Coli Reco Complex With Ssb C-terminus
pdb|3Q8D|B Chain B, E. Coli Reco Complex With Ssb C-terminus
Length = 242
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/130 (20%), Positives = 53/130 (40%), Gaps = 26/130 (20%)
Query: 51 VTTIGGKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGEAV--------------AIK 96
+ ++ G G P+ + ++GH +GV F C +GE V
Sbjct: 117 IQSLAGVTGTPEPALRRFELALLGHLGYGVNF-THCAGSGEPVDDTMTYRYREEKGFIAS 175
Query: 97 KVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLN--------LVLEYVPET 148
V+ +K + R+L+ + + P+ +L+ T + YL L +++P+
Sbjct: 176 VVIDNKTFTGRQLKALNAREFPDADTLRAAKRFTRMALKPYLGGKPLKSRELFRQFMPK- 234
Query: 149 VHRVIKHHYK 158
R +K HY+
Sbjct: 235 --RTVKTHYE 242
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 137 YLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQ 196
Y ++++ + ++ + + K R ++ + L +I L YIH V H DIK
Sbjct: 126 YRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSL---RILDILEYIHEHEYV-HGDIKAS 181
Query: 197 NLLVN-PHTHQLKLCDFGSA 215
NLL+N + Q+ L D+G A
Sbjct: 182 NLLLNYKNPDQVYLVDYGLA 201
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 174 QICRALAYIHNTIGVCHRDIKPQNLLV----NPHTHQLKLCDFGSAKVLVKGE 222
Q+ + Y+H+ + +RD+KP+N L+ N + + DF AK + E
Sbjct: 134 QLISRMEYVHSK-NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPE 185
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 28.5 bits (62), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 174 QICRALAYIHNTIGVCHRDIKPQNLLV----NPHTHQLKLCDFGSAKVLVKGE 222
Q+ + Y+H+ + +RD+KP+N L+ N + + DF AK + E
Sbjct: 113 QLISRMEYVHSK-NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPE 164
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 28.5 bits (62), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 137 YLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQ 196
Y ++++ + ++ + + K R ++ + L +I L YIH V H DIK
Sbjct: 126 YRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSL---RILDILEYIHEHEYV-HGDIKAS 181
Query: 197 NLLVN-PHTHQLKLCDFGSA 215
NLL+N + Q+ L D+G A
Sbjct: 182 NLLLNYKNPDQVYLVDYGLA 201
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 137 YLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALAYIHNTIGVCHRDIKPQ 196
Y ++++ + ++ + + K R ++ + L +I L YIH V H DIK
Sbjct: 126 YRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSL---RILDILEYIHEHEYV-HGDIKAS 181
Query: 197 NLLVN-PHTHQLKLCDFGSA 215
NLL+N + Q+ L D+G A
Sbjct: 182 NLLLNYKNPDQVYLVDYGLA 201
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,061,548
Number of Sequences: 62578
Number of extensions: 479804
Number of successful extensions: 4058
Number of sequences better than 100.0: 942
Number of HSP's better than 100.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 368
Number of HSP's that attempted gapping in prelim test: 1418
Number of HSP's gapped (non-prelim): 1009
length of query: 354
length of database: 14,973,337
effective HSP length: 100
effective length of query: 254
effective length of database: 8,715,537
effective search space: 2213746398
effective search space used: 2213746398
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)