BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018515
(354 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P54873|HMCS_ARATH Hydroxymethylglutaryl-CoA synthase OS=Arabidopsis thaliana GN=HMGS
PE=1 SV=2
Length = 461
Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 297/347 (85%), Positives = 329/347 (94%)
Query: 1 MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTA 60
MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQ+C+AFC+E+EDVISMS A
Sbjct: 1 MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQDCLAFCTELEDVISMSFNA 60
Query: 61 VTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGG 120
VT+L EKYKIDP QIGRLEVGSETVIDKSKSIKTFLMQ+FEK GNTD+EGVDSTNACYGG
Sbjct: 61 VTSLFEKYKIDPNQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDVEGVDSTNACYGG 120
Query: 121 TAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESK 180
TAAL NCVNWVES+SWDGRYGLV+CTDSAVYAEGPARPTGGAAA+ ML+GPDAP+ FESK
Sbjct: 121 TAALLNCVNWVESNSWDGRYGLVICTDSAVYAEGPARPTGGAAAIAMLIGPDAPIVFESK 180
Query: 181 LRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSN 240
LR SHM+H YDFYKPNLASEYPVVDGKLSQTCYLMALD+CYK LC+K+EK+EGK+FS+++
Sbjct: 181 LRASHMAHVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNKFEKIEGKEFSIND 240
Query: 241 ADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEK 300
ADY VFHSPYNKLVQKSFARLL+NDF+RNASS+DEAAKEK P+S+L+ DESYQSRDLEK
Sbjct: 241 ADYIVFHSPYNKLVQKSFARLLYNDFLRNASSIDEAAKEKFTPYSSLTLDESYQSRDLEK 300
Query: 301 VSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSEL 347
VSQQ+AKP YDAKVQP+TLIPK+VGNMYTASLYAA ASLIH KH++L
Sbjct: 301 VSQQIAKPFYDAKVQPTTLIPKEVGNMYTASLYAAFASLIHKKHNDL 347
>sp|P54872|HMCSA_DICDI Hydroxymethylglutaryl-CoA synthase A OS=Dictyostelium discoideum
GN=hgsA PE=1 SV=2
Length = 482
Score = 406 bits (1044), Expect = e-112, Method: Compositional matrix adjust.
Identities = 190/346 (54%), Positives = 244/346 (70%), Gaps = 3/346 (0%)
Query: 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVT 62
+N+GI +++YFP T V QE LE DG S+GKYT+GLGQ MAFC + ED+ S+SL AV
Sbjct: 5 ENIGIHGIEVYFPSTYVAQEDLEKFDGVSQGKYTLGLGQTNMAFCGDREDIYSLSLNAVN 64
Query: 63 NLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTA 122
NL++K+ +DP IGRLEVG+ETVIDKSKS+KT LM +F K GNT I+G+D+ NACYGGT+
Sbjct: 65 NLMDKFNVDPNSIGRLEVGTETVIDKSKSVKTVLMDLFAKHGNTSIDGIDTINACYGGTS 124
Query: 123 ALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLR 182
AL N + W+ESS WDGR +VV D AVY +GPARPTGGA V ML+GP+AP+ FES LR
Sbjct: 125 ALHNALQWMESSYWDGRNAIVVAGDIAVYEKGPARPTGGAGVVAMLIGPNAPITFESGLR 184
Query: 183 GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNAD 242
G HM + YDFYKP++ SEYP VDGKLS +CY A+D CY +EK GK FSL D
Sbjct: 185 GVHMENVYDFYKPDMDSEYPRVDGKLSISCYFRAIDNCYNRYAKAFEKKYGKSFSLDQVD 244
Query: 243 YFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVS 302
+ +FHSPYNKLVQKSF R+L+NDF+ N + A+ E + + +++Y LEK
Sbjct: 245 FALFHSPYNKLVQKSFGRMLYNDFLNNPNDSRYASLE---AYKNVKPEDTYFDSVLEKAL 301
Query: 303 QQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSELV 348
+ K Y KV P+TL+ KQ+GN Y S Y+ L SL+ K ++LV
Sbjct: 302 SAITKNDYATKVAPTTLLAKQLGNTYCGSTYSGLLSLLDEKSNDLV 347
>sp|Q5R7Z9|HMCS1_PONAB Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Pongo abelii
GN=HMGCS1 PE=2 SV=1
Length = 520
Score = 398 bits (1023), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/343 (55%), Positives = 247/343 (72%), Gaps = 5/343 (1%)
Query: 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVT 62
K+VGI+A++IYFP V Q LE +DG + GKYTIGLGQ M FC++ ED+ S+ +T V
Sbjct: 15 KDVGIVALEIYFPSQYVDQAELEKYDGVAAGKYTIGLGQAKMGFCTDREDINSLCMTVVQ 74
Query: 63 NLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTA 122
NL+E+ + IGRLEVG+ET+IDKSKS+KT LMQ+FE+ GNTDIEG+D+TNACYGGTA
Sbjct: 75 NLMERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDIEGIDTTNACYGGTA 134
Query: 123 ALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLR 182
A+FN VNW+ESSSWDGRY LVV D AVYA G ARPTGG AV +L+GP+AP+ FE LR
Sbjct: 135 AVFNAVNWIESSSWDGRYALVVAGDIAVYATGNARPTGGVGAVALLIGPNAPLIFERGLR 194
Query: 183 GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYE---KLEG--KQFS 237
G+HM HAYDFYKP++ SEYP+VDGKLS CYL ALD CY C K + EG K F+
Sbjct: 195 GTHMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYCKKIRAQWQKEGNDKDFT 254
Query: 238 LSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRD 297
L++ + +FHSPY KLVQKS AR+L NDF+ + + + L F + +++Y RD
Sbjct: 255 LNDFGFMIFHSPYCKLVQKSLARMLLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDRD 314
Query: 298 LEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLI 340
+EK + + L+ K + S L+ Q GNMYT+S+Y +LAS++
Sbjct: 315 VEKAFMKASSELFSQKTKASLLVSNQNGNMYTSSVYGSLASVL 357
>sp|Q01581|HMCS1_HUMAN Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Homo sapiens
GN=HMGCS1 PE=1 SV=2
Length = 520
Score = 397 bits (1021), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/343 (55%), Positives = 246/343 (71%), Gaps = 5/343 (1%)
Query: 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVT 62
K+VGI+A++IYFP V Q LE +DG GKYTIGLGQ M FC++ ED+ S+ +T V
Sbjct: 15 KDVGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQAKMGFCTDREDINSLCMTVVQ 74
Query: 63 NLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTA 122
NL+E+ + IGRLEVG+ET+IDKSKS+KT LMQ+FE+ GNTDIEG+D+TNACYGGTA
Sbjct: 75 NLMERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDIEGIDTTNACYGGTA 134
Query: 123 ALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLR 182
A+FN VNW+ESSSWDGRY LVV D AVYA G ARPTGG AV +L+GP+AP+ FE LR
Sbjct: 135 AVFNAVNWIESSSWDGRYALVVAGDIAVYATGNARPTGGVGAVALLIGPNAPLIFERGLR 194
Query: 183 GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYE---KLEG--KQFS 237
G+HM HAYDFYKP++ SEYP+VDGKLS CYL ALD CY C K + EG K F+
Sbjct: 195 GTHMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYCKKIHAQWQKEGNDKDFT 254
Query: 238 LSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRD 297
L++ + +FHSPY KLVQKS AR+L NDF+ + + + L F + +++Y RD
Sbjct: 255 LNDFGFMIFHSPYCKLVQKSLARMLLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDRD 314
Query: 298 LEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLI 340
+EK + + L+ K + S L+ Q GNMYT+S+Y +LAS++
Sbjct: 315 VEKAFMKASSELFSQKTKASLLVSNQNGNMYTSSVYGSLASVL 357
>sp|P23228|HMCS1_CHICK Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Gallus gallus
GN=HMGCS1 PE=1 SV=1
Length = 522
Score = 391 bits (1005), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/349 (56%), Positives = 246/349 (70%), Gaps = 16/349 (4%)
Query: 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVT 62
K+VGI+A++IYFP V Q LE +DG GKYTIGLGQ M FCS+ ED+ S+ LT V
Sbjct: 15 KDVGIVALEIYFPSQYVDQTELEKYDGVDAGKYTIGLGQSKMGFCSDREDINSLCLTVVQ 74
Query: 63 NLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTA 122
L+E+ + IGRLEVG+ET+IDKSKS+KT LMQ+FE+ GNTD+EG+D+TNACYGGTA
Sbjct: 75 KLMERNSLSYDCIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDVEGIDTTNACYGGTA 134
Query: 123 ALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLR 182
ALFN +NW+ESSSWDGRY LVV D AVYA G ARPTGGA AV MLVG +AP+ FE LR
Sbjct: 135 ALFNAINWIESSSWDGRYALVVAGDIAVYATGNARPTGGAGAVAMLVGSNAPLIFERGLR 194
Query: 183 GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYE---KLEG--KQFS 237
G+HM HAYDFYKP++ SEYPVVDGKLS CYL ALD CY +K + EG + F+
Sbjct: 195 GTHMQHAYDFYKPDMVSEYPVVDGKLSIQCYLSALDRCYSVYRNKIHAQWQKEGTDRGFT 254
Query: 238 LSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSG------DE 291
L++ + +FHSPY KLVQKS ARLL NDF+ D+ A+ G FS L ++
Sbjct: 255 LNDFGFMIFHSPYCKLVQKSVARLLLNDFLS-----DQNAETANGVFSGLEAFRDVKLED 309
Query: 292 SYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLI 340
+Y RD+EK + + L++ K + S L+ Q GNMYT S+Y LASL+
Sbjct: 310 TYFDRDVEKAFMKASAELFNQKTKASLLVSNQNGNMYTPSVYGCLASLL 358
>sp|Q8JZK9|HMCS1_MOUSE Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Mus musculus
GN=Hmgcs1 PE=1 SV=1
Length = 520
Score = 391 bits (1004), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/344 (54%), Positives = 250/344 (72%), Gaps = 7/344 (2%)
Query: 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVT 62
K+VGI+A++IYFP V Q LE +DG GKYTIGLGQ M FC++ ED+ S+ LT V
Sbjct: 15 KDVGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQARMGFCTDREDINSLCLTVVQ 74
Query: 63 NLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTA 122
L+E++ + IGRLEVG+ET+IDKSKS+K+ LMQ+FE+ GNTDIEG+D+TNACYGGTA
Sbjct: 75 KLMERHSLSYDCIGRLEVGTETIIDKSKSVKSNLMQLFEESGNTDIEGIDTTNACYGGTA 134
Query: 123 ALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLR 182
A+FN VNWVESSSWDGRY LVV D A+YA G ARPTGG AV +L+GP+AP+ F+ LR
Sbjct: 135 AVFNAVNWVESSSWDGRYALVVAGDIAIYATGNARPTGGVGAVALLIGPNAPLIFDRGLR 194
Query: 183 GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCY----KCLCSKYEKLEG--KQF 236
G+HM HAYDFYKP++ SEYPVVDGKLS CYL ALD CY K + ++++K EG K F
Sbjct: 195 GTHMQHAYDFYKPDMLSEYPVVDGKLSIQCYLSALDRCYSVYRKKIRAQWQK-EGKDKDF 253
Query: 237 SLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSR 296
+L++ + +FHSPY KLVQKS AR+ NDF+ + + + L F + +++Y R
Sbjct: 254 TLNDFGFMIFHSPYCKLVQKSLARMFLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDR 313
Query: 297 DLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLI 340
D+EK + + L++ K + S L+ Q GNMYT+S+Y +LAS++
Sbjct: 314 DVEKAFMKASSELFNQKTKASLLVSNQNGNMYTSSVYGSLASVL 357
>sp|P17425|HMCS1_RAT Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Rattus
norvegicus GN=Hmgcs1 PE=1 SV=1
Length = 520
Score = 389 bits (1000), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/344 (54%), Positives = 249/344 (72%), Gaps = 7/344 (2%)
Query: 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVT 62
K+VGI+A++IYFP V Q LE +DG GKYTIGLGQ M FC++ ED+ S+ LT V
Sbjct: 15 KDVGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQARMGFCTDREDINSLCLTVVQ 74
Query: 63 NLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTA 122
L+E+ + IGRLEVG+ET+IDKSKS+K+ LMQ+FE+ GNTDIEG+D+TNACYGGTA
Sbjct: 75 KLMERNSLSYDCIGRLEVGTETIIDKSKSVKSNLMQLFEESGNTDIEGIDTTNACYGGTA 134
Query: 123 ALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLR 182
A+FN VNW+ESSSWDGRY LVV D A+YA G ARPTGG AV +L+GP+APV F+ LR
Sbjct: 135 AVFNAVNWIESSSWDGRYALVVAGDIAIYASGNARPTGGVGAVALLIGPNAPVIFDRGLR 194
Query: 183 GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCY----KCLCSKYEKLEG--KQF 236
G+HM HAYDFYKP++ SEYPVVDGKLS CYL ALD CY K + ++++K EG K F
Sbjct: 195 GTHMQHAYDFYKPDMLSEYPVVDGKLSIQCYLSALDRCYSVYRKKIRAQWQK-EGKDKDF 253
Query: 237 SLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSR 296
+L++ + +FHSPY KLVQKS AR+ NDF+ + + + L F + +++Y R
Sbjct: 254 TLNDFGFMIFHSPYCKLVQKSLARMFLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDR 313
Query: 297 DLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLI 340
D+EK + + L++ K + S L+ Q GNMYT+S+Y +LAS++
Sbjct: 314 DVEKAFMKASAELFNQKTKASLLVSNQNGNMYTSSVYGSLASVL 357
>sp|P54961|HMCS1_BLAGE Hydroxymethylglutaryl-CoA synthase 1 OS=Blattella germanica
GN=HMGCS-1 PE=2 SV=1
Length = 453
Score = 389 bits (1000), Expect = e-107, Method: Compositional matrix adjust.
Identities = 189/346 (54%), Positives = 247/346 (71%), Gaps = 8/346 (2%)
Query: 4 NVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTN 63
+VGI+A+++ FP V Q LE +D S GKYT+GLGQ M FC++ ED+ S+ LT V+
Sbjct: 5 DVGIVALELIFPSQYVDQVDLEVYDNVSAGKYTVGLGQARMGFCTDREDINSLCLTVVSR 64
Query: 64 LLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAA 123
L+E++ I QIGRLEVG+ET++DKSKS+KT LMQ+F+ NTDIEGVD+ NACYGGT+A
Sbjct: 65 LMERWSIPYSQIGRLEVGTETLLDKSKSVKTVLMQLFKD--NTDIEGVDTVNACYGGTSA 122
Query: 124 LFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRG 183
LFN ++WVESSSWDGRY LVV D AVYA+G ARPTGGA AV MLVG +AP+ F+ +R
Sbjct: 123 LFNAISWVESSSWDGRYALVVAGDIAVYAKGSARPTGGAGAVAMLVGANAPLVFDRGVRS 182
Query: 184 SHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADY 243
SHM HAYDFYKP+L+S YP VDGKLS CYL ALD CY+ CSK +K G++F + D
Sbjct: 183 SHMQHAYDFYKPDLSSLYPTVDGKLSIQCYLSALDHCYQLYCSKIQKQLGEKFDIERLDA 242
Query: 244 FVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSG---DESYQSRDLEK 300
+FH+PY KLVQKS ARL+ NDF+R + +E K L G +++Y R++EK
Sbjct: 243 VLFHAPYCKLVQKSLARLVLNDFVRAS---EEERTTKYSSLEALKGVKLEDTYFDREVEK 299
Query: 301 VSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSE 346
+K +++ K +PS L+ QVGNMYT SLY L SL+ +K ++
Sbjct: 300 AVMTYSKNMFEEKTKPSLLLANQVGNMYTPSLYGGLVSLLVSKSAQ 345
>sp|P54868|HMCS2_HUMAN Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Homo sapiens
GN=HMGCS2 PE=1 SV=1
Length = 508
Score = 388 bits (996), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/351 (52%), Positives = 246/351 (70%), Gaps = 6/351 (1%)
Query: 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVT 62
K+VGILA+++YFP V Q LE ++ GKYT+GLGQ M FCS ED+ S+ LT V
Sbjct: 52 KDVGILALEVYFPAQYVDQTDLEKYNNVEAGKYTVGLGQTRMGFCSVQEDINSLCLTVVQ 111
Query: 63 NLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTA 122
L+E+ ++ +GRLEVG+ET+IDKSK++KT LM++F+ GNTDIEG+D+TNACYGGTA
Sbjct: 112 RLMERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTA 171
Query: 123 ALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLR 182
+LFN NW+ESSSWDGRY +VVC D AVY G ARPTGGA AV ML+GP AP+A E LR
Sbjct: 172 SLFNAANWMESSSWDGRYAMVVCGDIAVYPSGNARPTGGAGAVAMLIGPKAPLALERGLR 231
Query: 183 GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYE---KLEG--KQFS 237
G+HM + YDFYKPNLASEYP+VDGKLS CYL ALD CY K + K G + F+
Sbjct: 232 GTHMENVYDFYKPNLASEYPIVDGKLSIQCYLRALDRCYTSYRKKIQNQWKQAGSDRPFT 291
Query: 238 LSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRD 297
L + Y +FH+P+ K+VQKS ARL+FNDF+ +S + + L F L +++Y ++D
Sbjct: 292 LDDLQYMIFHTPFCKMVQKSLARLMFNDFLSASSDTQTSLYKGLEAFGGLKLEDTYTNKD 351
Query: 298 LEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLI-HNKHSEL 347
L+K + ++ ++D K + S + GNMYT+SLY LASL+ H+ EL
Sbjct: 352 LDKALLKASQDMFDKKTKASLYLSTHNGNMYTSSLYGCLASLLSHHSAQEL 402
>sp|P13704|HMCS1_CRIGR Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Cricetulus
griseus GN=HMGCS1 PE=3 SV=1
Length = 520
Score = 386 bits (991), Expect = e-106, Method: Compositional matrix adjust.
Identities = 185/344 (53%), Positives = 248/344 (72%), Gaps = 7/344 (2%)
Query: 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVT 62
K+VGI+A++IYFP V Q LE +DG GKYTIGLGQ M FC++ ED+ S+ LT V
Sbjct: 15 KDVGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQARMGFCTDREDINSLCLTVVQ 74
Query: 63 NLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTA 122
NL+E+ + IGRLEVG+ET+IDKSKS+K+ LMQ+FE+ GNTDIEG+D+TNACYGGTA
Sbjct: 75 NLMERNSLSYDCIGRLEVGTETIIDKSKSVKSNLMQLFEESGNTDIEGIDTTNACYGGTA 134
Query: 123 ALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLR 182
A+FN VNW+ESSSWDGRY LVV D A+YA G ARPTGG AV +L+GP+AP+ F+ LR
Sbjct: 135 AVFNAVNWIESSSWDGRYALVVAGDIAIYATGNARPTGGVGAVALLIGPNAPLIFDRGLR 194
Query: 183 GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCY----KCLCSKYEKLEG--KQF 236
G+HM HAYDFYKP++ SEYP+VDGKLS CYL ALD CY K + ++++K EG F
Sbjct: 195 GTHMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYRKKIRAQWQK-EGNDNDF 253
Query: 237 SLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSR 296
+L++ + + HSPY KLVQKS AR+ NDF+ + + + L F + +++Y R
Sbjct: 254 TLNDFGFMISHSPYCKLVQKSLARMFLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDR 313
Query: 297 DLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLI 340
D+EK + + L++ K + S L+ Q GNMYT+S+Y +LAS++
Sbjct: 314 DVEKAFMKASSELFNQKTKASLLVSNQNGNMYTSSVYGSLASVL 357
>sp|Q86HL5|HMCSB_DICDI Hydroxymethylglutaryl-CoA synthase B OS=Dictyostelium discoideum
GN=hgsB PE=3 SV=1
Length = 468
Score = 384 bits (985), Expect = e-106, Method: Compositional matrix adjust.
Identities = 181/343 (52%), Positives = 248/343 (72%), Gaps = 5/343 (1%)
Query: 2 AKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAV 61
K++GI A+DIYFP T V Q L+ +D S GKYTIGLGQ M+F + ED++SM++T+V
Sbjct: 4 TKDIGICAIDIYFPQTYVNQSELKKYDKVSNGKYTIGLGQTNMSFVGDREDIVSMAMTSV 63
Query: 62 TNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGT 121
++ KY ID + IGRLEVG+ET+IDKSKS+K+ +M +F+++GNT +EGVD+ NACYGGT
Sbjct: 64 KMMMSKYSIDYQSIGRLEVGTETIIDKSKSVKSSIMSLFQEYGNTSLEGVDTLNACYGGT 123
Query: 122 AALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKL 181
ALFN + W+ESS WDGRY LVV D AVY++G ARPTGGA V ML+GP+A + F+ L
Sbjct: 124 NALFNSLQWIESSYWDGRYALVVTGDIAVYSKGAARPTGGAGVVTMLIGPNATLIFDQSL 183
Query: 182 RGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKL-EGKQFSLSN 240
RG+HM + DFYKP+L+SEYP VDGKLS CYL ALD CY K+E + + +FS+ +
Sbjct: 184 RGTHMENVNDFYKPDLSSEYPYVDGKLSIECYLRALDKCYLEYKKKFESINDDNKFSMDS 243
Query: 241 ADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLS-GDESYQSRDLE 299
DY FHSPYN+LVQKS+ARL++NDF++N + + L PF LS G +SY + L+
Sbjct: 244 FDYVCFHSPYNRLVQKSYARLIYNDFLQNP---NNPKYQDLLPFKDLSTGKDSYINSKLD 300
Query: 300 KVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHN 342
+++ +L+ + KV PSTL+ K+ GN Y S+Y+ + SL+ N
Sbjct: 301 QITLKLSLDDFKTKVNPSTLLSKECGNSYCGSVYSGILSLLSN 343
>sp|P54869|HMCS2_MOUSE Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Mus musculus
GN=Hmgcs2 PE=1 SV=2
Length = 508
Score = 381 bits (979), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/351 (52%), Positives = 246/351 (70%), Gaps = 6/351 (1%)
Query: 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVT 62
K+VGILA+++YFP V Q LE + GKYT+GLGQ M FCS ED+ S+ LT V
Sbjct: 52 KDVGILALEVYFPAQYVDQTDLEKFNNVEAGKYTVGLGQTRMGFCSVQEDINSLCLTVVQ 111
Query: 63 NLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTA 122
L+E+ K+ +GRLEVG+ET+IDKSK++KT LM++F+ GNTDIEG+D+TNACYGGTA
Sbjct: 112 RLMERTKLPWDAVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTA 171
Query: 123 ALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLR 182
+LFN NW+ESS WDGRY LVVC D AVY G ARPTGGA AV ML+GP AP+ E LR
Sbjct: 172 SLFNAANWMESSYWDGRYALVVCGDIAVYPSGNARPTGGAGAVAMLIGPKAPLVLEQGLR 231
Query: 183 GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCY----KCLCSKYEKLEGKQ-FS 237
G+HM +AYDFYKPNLASEYP+VDGKLS CYL ALD CY K + +++++ Q F+
Sbjct: 232 GTHMENAYDFYKPNLASEYPLVDGKLSIQCYLRALDRCYAAYRKKIQNQWKQAGNNQPFT 291
Query: 238 LSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRD 297
L + Y +FH+P+ K+VQKS ARL+FNDF+ ++S + L F L +E+Y ++D
Sbjct: 292 LDDVQYMIFHTPFCKMVQKSLARLMFNDFLSSSSDKQNNLYKGLEAFRGLKLEETYTNKD 351
Query: 298 LEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLI-HNKHSEL 347
++K + + +++ K + S + GNMYT+SLY LASL+ H+ EL
Sbjct: 352 VDKALLKASLDMFNQKTKASLYLSTNNGNMYTSSLYGCLASLLSHHSAQEL 402
>sp|O02734|HMCS2_PIG Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Sus scrofa
GN=HMGCS2 PE=2 SV=1
Length = 508
Score = 379 bits (974), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/344 (53%), Positives = 240/344 (69%), Gaps = 7/344 (2%)
Query: 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVT 62
K+VGILA+++YFP V Q LE D G+YT+GLGQ M FCS ED+ S+ LT V
Sbjct: 52 KDVGILALEVYFPAQYVDQTDLEKFDNVEAGRYTVGLGQTHMGFCSVQEDINSLCLTVVQ 111
Query: 63 NLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTA 122
L+E+ ++ +G LEVG+ET+IDKSKS+KT LM++F+ GNTDIEG+D+TNACYGGTA
Sbjct: 112 RLMERTQLPWDSVGWLEVGTETIIDKSKSVKTVLMELFQDSGNTDIEGIDTTNACYGGTA 171
Query: 123 ALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLR 182
+LFN NWVESS+WDGRY +VVC D AVY G +RPTGGA AV MLVGP+AP+A E LR
Sbjct: 172 SLFNAANWVESSAWDGRYAVVVCGDIAVYPRGNSRPTGGAGAVAMLVGPEAPLALERGLR 231
Query: 183 GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQ------F 236
G+HM +AYDFYKPN SEYP+VDGKLS CYL ALD CY K EK + KQ F
Sbjct: 232 GTHMENAYDFYKPNATSEYPLVDGKLSIQCYLRALDRCYTLYRQKIEK-QWKQAGIERHF 290
Query: 237 SLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSR 296
+L + + +FH+P+ KLVQKS ARL+F+DF+ S + + L F +++Y ++
Sbjct: 291 TLDDLQFMIFHTPFCKLVQKSLARLMFSDFLLADSDTQSSLYKGLEAFRGQKLEDTYANK 350
Query: 297 DLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLI 340
D+EK Q+ + L++ K +PS + GNMYT+SLY LASL+
Sbjct: 351 DIEKAFQKASLDLFNKKTKPSLYLSLHNGNMYTSSLYGCLASLL 394
>sp|P22791|HMCS2_RAT Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Rattus
norvegicus GN=Hmgcs2 PE=2 SV=1
Length = 508
Score = 379 bits (973), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/352 (52%), Positives = 242/352 (68%), Gaps = 8/352 (2%)
Query: 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVT 62
K+VGILA+++YFP V Q LE + GKYT+GLGQ M FCS ED+ S+ LT V
Sbjct: 52 KDVGILALEVYFPAQYVDQTDLEKFNNVEAGKYTVGLGQTRMGFCSVQEDINSLCLTVVQ 111
Query: 63 NLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTA 122
L+E+ K+ +GRLEVG+ET+IDKSK++KT LM++F+ GNTDIEG+D+TNACYGGTA
Sbjct: 112 RLMERTKLPWDAVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTA 171
Query: 123 ALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLR 182
+LFN NW+ESS WDGRY LVVC D AVY G RPTGGA AV ML+GP AP+ E LR
Sbjct: 172 SLFNAANWMESSYWDGRYALVVCGDIAVYPSGNPRPTGGAGAVAMLIGPKAPLVLEQGLR 231
Query: 183 GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQ------F 236
G+HM +AYDFYKPNLASEYP+VDGKLS CYL ALD CY K + + KQ F
Sbjct: 232 GTHMENAYDFYKPNLASEYPLVDGKLSIQCYLRALDRCYAAYRRKIQN-QWKQAGNNQPF 290
Query: 237 SLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSR 296
+L + Y +FH+P+ K+VQKS ARL+FNDF+ ++S + L F L +E+Y ++
Sbjct: 291 TLDDVQYMIFHTPFCKMVQKSLARLMFNDFLSSSSDKQNNLYKGLEAFKGLKLEETYTNK 350
Query: 297 DLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLI-HNKHSEL 347
D++K + + +++ K + S + GNMYT+SLY LASL+ H+ EL
Sbjct: 351 DVDKALLKASLDMFNKKTKASLYLSTNNGNMYTSSLYGCLASLLSHHSAQEL 402
>sp|Q2KIE6|HMCS2_BOVIN Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Bos taurus
GN=HMGCS2 PE=1 SV=1
Length = 508
Score = 375 bits (964), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/352 (52%), Positives = 242/352 (68%), Gaps = 8/352 (2%)
Query: 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVT 62
K+VGILAM++YFP V Q LE + G+YT+GLGQ M FCS EDV S+ LT V
Sbjct: 52 KDVGILAMEVYFPAQYVDQTELEKFNKVEAGRYTVGLGQTQMGFCSVQEDVNSLCLTVVQ 111
Query: 63 NLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTA 122
L+E+ ++ +GRLEVG+ET+IDKSK++KT LM++F+ GNTDIEG+D+TNACYGGTA
Sbjct: 112 QLMERTQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTA 171
Query: 123 ALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLR 182
+LFN NW+ESSSWDGRY LVVC D AVY G ARPTGGA AV MLVGP+AP+ E LR
Sbjct: 172 SLFNAANWMESSSWDGRYALVVCGDIAVYPSGNARPTGGAGAVAMLVGPEAPLVLERGLR 231
Query: 183 GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQ------F 236
G+HM + YDFYKP++ SEYP+VDGKLS CYL ALD CY K EK + KQ F
Sbjct: 232 GTHMENVYDFYKPDVTSEYPLVDGKLSIQCYLRALDKCYAFYRQKIEK-QWKQAGIDRPF 290
Query: 237 SLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSR 296
+L + Y +FH+P+ KLVQKS ARL+FNDF+ + + L F L +++Y ++
Sbjct: 291 TLDDVQYMIFHTPFCKLVQKSLARLMFNDFLLASGDTQTGIYKGLEAFRGLKLEDTYTNK 350
Query: 297 DLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLI-HNKHSEL 347
D++K + + +++ K + S + GNMYT+SLY LASL+ H+ +L
Sbjct: 351 DVDKAFLKASLNMFNKKTKNSLYLSTYNGNMYTSSLYGCLASLLAHHSAQDL 402
>sp|P54870|HMCS2_BLAGE Hydroxymethylglutaryl-CoA synthase 2 OS=Blattella germanica
GN=HMGCS-2 PE=2 SV=1
Length = 455
Score = 364 bits (935), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/344 (52%), Positives = 234/344 (68%), Gaps = 12/344 (3%)
Query: 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVT 62
++VGI+ +++ FP V Q LE +D S GKYT+GLGQ+ M C++ ED+ S+ LTAV
Sbjct: 6 EDVGIIGIEMIFPSLYVDQAELETYDEVSPGKYTMGLGQDKMGVCTDREDINSLCLTAVD 65
Query: 63 NLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTA 122
L+E+ ID IG LEVG+ET++DK KS+KT LMQ+FE+ GNTD+EG+D+ NACY GTA
Sbjct: 66 KLMERNNIDYNDIGWLEVGTETILDKVKSVKTVLMQLFEESGNTDVEGIDTINACYRGTA 125
Query: 123 ALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLR 182
ALFN + W+ESSSWDGRY +VV D A+YA+ PTGGA A++ML+G +AP+ + +R
Sbjct: 126 ALFNALIWIESSSWDGRYAIVVAADIAIYAK-ECSPTGGAGALLMLIGANAPIVIDRGVR 184
Query: 183 GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKL------EGKQF 236
SHM HAYDFYKP+L SEYPVVDGKLS CYL ALD CY CSK EK E +
Sbjct: 185 ASHMKHAYDFYKPDLMSEYPVVDGKLSVQCYLSALDHCYPRFCSKTEKYLKRCGKENTKI 244
Query: 237 SLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSR 296
L D FVFHSPY KLVQKS ARL+ NDF++ + L L +++Y R
Sbjct: 245 DLDYFDAFVFHSPYCKLVQKSVARLVLNDFIQYPEKY-----QDLQQLRNLKFEDTYFDR 299
Query: 297 DLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLI 340
D+EK+ +K L++ K +PS ++ QVGNMYT SLY L SL+
Sbjct: 300 DIEKIFMDKSKQLFEKKTKPSLMLANQVGNMYTTSLYGGLVSLL 343
>sp|P54839|HMCS_YEAST Hydroxymethylglutaryl-CoA synthase OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ERG13 PE=1 SV=1
Length = 491
Score = 357 bits (917), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 181/347 (52%), Positives = 232/347 (66%), Gaps = 15/347 (4%)
Query: 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVT 62
+NVGI + IY P CV Q LE DG S+GKYTIGLGQ M+F ++ ED+ SMSLT ++
Sbjct: 47 QNVGIKGIQIYIPTQCVNQSELEKFDGVSQGKYTIGLGQTNMSFVNDREDIYSMSLTVLS 106
Query: 63 NLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTA 122
L++ Y ID +IGRLEVG+ET+IDKSKS+K+ LMQ+F + NTD+EG+D+ NACYGGT
Sbjct: 107 KLIKSYNIDTNKIGRLEVGTETLIDKSKSVKSVLMQLFGE--NTDVEGIDTLNACYGGTN 164
Query: 123 ALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLR 182
ALFN +NW+ES++WDGR +VVC D A+Y +G ARPTGGA V M +GPDAP+ F+S +R
Sbjct: 165 ALFNSLNWIESNAWDGRDAIVVCGDIAIYDKGAARPTGGAGTVAMWIGPDAPIVFDS-VR 223
Query: 183 GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSK-YEKLEGKQFSLSNA 241
S+M HAYDFYKP+ SEYP VDG S TCY+ ALD YK K K + S+A
Sbjct: 224 ASYMEHAYDFYKPDFTSEYPYVDGHFSLTCYVKALDQVYKSYSKKAISKGLVSDPAGSDA 283
Query: 242 -------DYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQ 294
DY VFH P KLV KS+ RLL+NDF N E E +T DES
Sbjct: 284 LNVLKYFDYNVFHVPTCKLVTKSYGRLLYNDFRANPQLFPEVDAE----LATRDYDESLT 339
Query: 295 SRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIH 341
+++EK +AKP + +V S ++P GNMYTAS+YAA ASL++
Sbjct: 340 DKNIEKTFVNVAKPFHKERVAQSLIVPTNTGNMYTASVYAAFASLLN 386
>sp|P54874|HMCS_SCHPO Hydroxymethylglutaryl-CoA synthase OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=hcs1 PE=1 SV=1
Length = 447
Score = 338 bits (866), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 171/341 (50%), Positives = 227/341 (66%), Gaps = 8/341 (2%)
Query: 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVT 62
K++GI + +Y P V+Q ALEAHDG S GKYTIGLG MAF + ED+ S LTA++
Sbjct: 6 KDIGIKGLVLYTPNQYVEQAALEAHDGVSTGKYTIGLGLTKMAFVDDREDIYSFGLTALS 65
Query: 63 NLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTA 122
L+++Y+ID +IGRLEVG+ET+IDKSKS+K+ LMQ+F N ++EG+D NACYGG
Sbjct: 66 QLIKRYQIDISKIGRLEVGTETIIDKSKSVKSVLMQLFGD--NHNVEGIDCVNACYGGVN 123
Query: 123 ALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLR 182
ALFN ++W+ESS+WDGR G+VV D A+YA+G ARPTGGA V +LVGP+AP+ FE LR
Sbjct: 124 ALFNTIDWIESSAWDGRDGIVVAGDIALYAKGNARPTGGAGCVALLVGPNAPIVFEPGLR 183
Query: 183 GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQ--FSLSN 240
G++M HAYDFYKP+L SEYP VDG S CY+ ALD Y + GK L
Sbjct: 184 GTYMQHAYDFYKPDLTSEYPYVDGHFSLECYVKALDGAYANYNVRDVAKNGKSQGLGLDR 243
Query: 241 ADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVD-EAAKEKLGPFSTLSGDESYQSRDLE 299
DY +FH+P K VQK++ARLL+ D S+ + E +E L STL +S + LE
Sbjct: 244 FDYCIFHAPTCKQVQKAYARLLYTDSAAEPSNPELEGVRELL---STLDAKKSLTDKALE 300
Query: 300 KVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLI 340
K + K ++ +V PS P GNMYTAS+++ L +L+
Sbjct: 301 KGLMAITKERFNKRVSPSVYAPTNCGNMYTASIFSCLTALL 341
>sp|P54871|HMCS_CAEEL Hydroxymethylglutaryl-CoA synthase OS=Caenorhabditis elegans
GN=F25B4.6 PE=2 SV=2
Length = 462
Score = 255 bits (651), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 143/341 (41%), Positives = 199/341 (58%), Gaps = 24/341 (7%)
Query: 4 NVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTN 63
+VGI A+++YFP V Q LE + S GKYTIGLGQ+ M FCS+ ED++S+SLT
Sbjct: 13 DVGIGAIELYFPQNFVDQNDLEKFNNVSSGKYTIGLGQQQMGFCSDNEDIVSISLTVTRK 72
Query: 64 LLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAA 123
L+E YKI IG L VG+ET+IDKSKS+KT LM +F GN+DIEGVD NAC+GG A
Sbjct: 73 LIETYKISTDSIGCLVVGTETMIDKSKSVKTALMDLFP--GNSDIEGVDIKNACFGGAQA 130
Query: 124 LFNCVNWVE-SSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLR 182
L + ++WV + D + +VV D A+Y EGPAR TGGA A+ L+ PDA + + +
Sbjct: 131 LLHAIDWVTVNHPLDKKNAIVVVADIAIYEEGPARCTGGAGAIAFLICPDASIPIDRQFS 190
Query: 183 GSHMSHAYDFYKP--NLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSN 240
HM + +DF+KP + SEYPVVDG LS + YL A+ Y SK + L++
Sbjct: 191 ACHMKNTWDFFKPITPIPSEYPVVDGSLSLSSYLEAVRMTYTYFISKVNRHTTGIDGLNS 250
Query: 241 ADYFVFHSPYNKLVQKSFARLLFNDF-MR----NASSVDEAAKEKLGPFSTLSGDESYQS 295
D HSP+ K+VQK A + + D +R N + VD E D + +
Sbjct: 251 FDGVFLHSPFTKMVQKGLAVMNYTDSQLRHKQLNGNGVDHKLDEN---------DRAGLA 301
Query: 296 RDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAAL 336
+ +E L+ ++ K P + +++GNMYT SL+A L
Sbjct: 302 KMIE-----LSAQVWKEKTDPYLVFNRRIGNMYTPSLFAQL 337
>sp|Q8TVL0|Y1379_METKA UPF0219 protein MK1379 OS=Methanopyrus kandleri (strain AV19 / DSM
6324 / JCM 9639 / NBRC 100938) GN=MK1379 PE=3 SV=1
Length = 350
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 113/266 (42%), Gaps = 16/266 (6%)
Query: 2 AKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAV 61
++ VGI+ Y P ++ E + A G GL E + SE ED ++++ A
Sbjct: 4 SERVGIVGYGAYVPRYRIKAEEIAAVWGDDVDSIKSGLMIEEKSVPSETEDSATIAVEAA 63
Query: 62 TNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNT-DIEGVDSTNACYGG 120
N + + +IDPK IG + VGSE+ ++K + G T D+ D AC G
Sbjct: 64 KNAVARAEIDPKDIGAIYVGSES---PPYAVKPTATIVAAAIGATPDLTAADYEFACKAG 120
Query: 121 TAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEG-PARPTGGAAAVVMLVGPDAPVAFES 179
TAA+ C V S +YGL + D+A A G P T A ++G VA E
Sbjct: 121 TAAIQTCAGLVASGMI--KYGLAIGADTAQGAPGDPLEYTAAAGGAAFVIGRKKLVA-EM 177
Query: 180 KLRGSHMSHAYDFYKPNLASEYPVVDGKLSQT-CYLMALDTCYKCLCSKYEKLEGKQFSL 238
+ S+ + DF++ YP G+ + Y + + L +E S
Sbjct: 178 EGTYSYTTDTPDFWR-REGQPYPRHGGRFTGAPAYFKHIIRAARGL------MEELDLSP 230
Query: 239 SNADYFVFHSPYNKLVQKSFARLLFN 264
+ DY VFH P K +K L F
Sbjct: 231 EDFDYAVFHQPNGKFPRKVARSLGFE 256
>sp|O26883|Y792_METTH UPF0219 protein MTH_792 OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=MTH_792 PE=3 SV=2
Length = 346
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 109/261 (41%), Gaps = 14/261 (5%)
Query: 6 GILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLL 65
GI+ +Y P ++ E + G + GL E + ED ++S+ A N L
Sbjct: 3 GIVGYGVYIPSYRIKVEEIARVWGDDPQAISRGLVVEEKSVPGPDEDTATISVEAARNAL 62
Query: 66 EKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALF 125
+ +IDP +IG + VGSE+ K T + + E ++ D AC GTA +
Sbjct: 63 RRSQIDPSEIGAVYVGSESHPYAVKPTATIVAEAVEA--TPEMTAADLEFACKAGTAGIQ 120
Query: 126 NCVNWVESSSWDGRYGLVVCTDSAVYAEGPARP-TGGAAAVVMLVGPDAPVAFESKLRGS 184
C+ V+S +YGL V D+A A G A T A ++G +A + K S
Sbjct: 121 ACMGLVDSGII--KYGLAVGADTAQGAPGDALEYTASAGGAAYVIGGKNCLA-DIKETYS 177
Query: 185 HMSHAYDFYKPNLASEYPVVDGKLS-QTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADY 243
+ DFY+ YP G+ + + Y L + +E S + DY
Sbjct: 178 FTTDTPDFYR-REGMPYPRHGGRFTGEPAYFK------HVLGAARGMMEKTGLSADDFDY 230
Query: 244 FVFHSPYNKLVQKSFARLLFN 264
VFH P K K+ +L F
Sbjct: 231 AVFHQPNGKFYLKAARKLGFE 251
>sp|Q4J933|Y1362_SULAC UPF0219 protein Saci_1362 OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=Saci_1362 PE=3 SV=1
Length = 348
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 51 EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNT-DIE 109
ED +M+ + N L + IDP QIG + GSE+ + K T L+ + G T D
Sbjct: 48 EDSTTMAWESSKNALRRANIDPSQIGVVLFGSESKVYAVKPTATILI---DALGVTNDSL 104
Query: 110 GVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPA-RPTGGAAAVVML 168
G D AC G +AAL VE+S +YGLV+ +D+A G + AA+V +
Sbjct: 105 GADMEFACRGASAALRLVGGMVEASKI--KYGLVIGSDTAQSNPGDVLELSSAAASVSYI 162
Query: 169 VGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPV-VDGKLSQTCYLMALDTCYKCLCSK 227
VGP+ + S+ S DF++ + YPV +G + Y + + L +
Sbjct: 163 VGPENEAGAVIEAAVSYTSDTPDFWRRD-GMPYPVHGEGFTGEPAYFDHILSAVNLLFRE 221
Query: 228 YEKLEGKQFSLSNADYFVFHSPYNKL 253
+ +S+ DYFVFH P K
Sbjct: 222 ------NGYKISDFDYFVFHQPNGKF 241
>sp|Q2NHU7|Y117_METST UPF0219 protein Msp_0117 OS=Methanosphaera stadtmanae (strain DSM
3091) GN=Msp_0117 PE=3 SV=1
Length = 346
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 92/217 (42%), Gaps = 14/217 (6%)
Query: 51 EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEG 110
ED I++S+ A L++ +IDP+ IG + VGSE+ K T + N +
Sbjct: 48 EDTITISVEAARRALQRAEIDPQDIGAIYVGSESHPYAVKPTATIVADAIRASPN--LTA 105
Query: 111 VDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPA-RPTGGAAAVVMLV 169
D AC GTA + V V+S +YGL + D++ A G A T A ++
Sbjct: 106 ADLEFACKAGTAGIQAAVGLVKSGMI--KYGLAIGADTSQGAPGDALEYTASAGGAAYII 163
Query: 170 GPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLS-QTCYLMALDTCYKCLCSKY 228
G D +A + + S + DFY+ YP G+ + Q Y L +
Sbjct: 164 GEDNTIA-DIEHTCSFTTDTPDFYR-REGQAYPSHGGRFTGQPAYFK------HVLGAAN 215
Query: 229 EKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFND 265
LE + + DY VFH P K + +L F +
Sbjct: 216 RMLEETGTTAKDYDYAVFHQPNGKFYIRVARKLGFTE 252
>sp|A5UNI8|Y1561_METS3 UPF0219 protein Msm_1561 OS=Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861) GN=Msm_1561 PE=3 SV=1
Length = 345
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 113/262 (43%), Gaps = 14/262 (5%)
Query: 5 VGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNL 64
VGI+ Y P ++ E + G + GL + S ED ++++TA
Sbjct: 2 VGIVGYGAYVPSYRIKVEEIAKVWGDDPVALSRGLVVNEKSVPSADEDTATIAVTAARYA 61
Query: 65 LEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAAL 124
L + +IDP++IG + VGSE+ K T + + D+ D AC GTA +
Sbjct: 62 LARAQIDPQKIGAIYVGSESHPYAVKPSATIVAEAIN--ATPDLTAADLEFACKAGTAGI 119
Query: 125 FNCVNWVESSSWDGRYGLVVCTDSAVYAEGPA-RPTGGAAAVVMLVGPDAPVAFESKLRG 183
+ V+S + YGL + D++ A G A T A ++G D +A + +
Sbjct: 120 QMTMGLVDSDMIE--YGLAIGADTSQGAPGDALEYTASAGGAAYIIGKDNTLA-DIEETY 176
Query: 184 SHMSHAYDFYKPNLASEYPVVDGKLS-QTCYLMALDTCYKCLCSKYEKLEGKQFSLSNAD 242
S + DFY+ +YP G+ + + Y + + K L +EK + K + D
Sbjct: 177 SFTTDTPDFYR-REGQDYPSHGGRFTGEPAYFKHVLSAAKGL---FEKTDSKP---EDYD 229
Query: 243 YFVFHSPYNKLVQKSFARLLFN 264
Y FH P K ++ +L F
Sbjct: 230 YACFHQPNGKFYLRAGKKLGFT 251
>sp|A1RSQ5|Y811_PYRIL UPF0219 protein Pisl_0811 OS=Pyrobaculum islandicum (strain DSM
4184 / JCM 9189) GN=Pisl_0811 PE=3 SV=1
Length = 350
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 16/206 (7%)
Query: 51 EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFG-NTDIE 109
ED +++++ A L++ +IDPK+IG + VG+E+ K ++K + + G + ++
Sbjct: 50 EDAVTIAVEAAKRALKRARIDPKRIGAIYVGTES---KPYAVKPISSILVDALGLSNNVF 106
Query: 110 GVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARP-TGGAAAVVML 168
VD AC G+ L V VES + YG+ V D++ G + + V ++
Sbjct: 107 AVDMEFACKAGSEGLMAAVGLVESGRIE--YGMTVGADTSQGEPGEHLEYSASSGGVALI 164
Query: 169 VGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPV-VDGKLSQTCYLMALDTCYKCLCSK 227
VG D VA E + S +S DF++ S YP+ +G + Y + + L K
Sbjct: 165 VGRDGIVA-ELEAVYSFVSDTPDFWRRE-GSPYPMHGEGFTGEPAYFRHIIGATRGLMEK 222
Query: 228 YEKLEGKQFSLSNADYFVFHSPYNKL 253
Y + S+ Y VFH P +
Sbjct: 223 Y------GYKPSDFTYAVFHQPNGRF 242
>sp|Q9UYY8|Y1369_PYRAB UPF0219 protein PYRAB13690 OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=acaA PE=3 SV=1
Length = 350
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 110/263 (41%), Gaps = 36/263 (13%)
Query: 2 AKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAV 61
+K +GI+ Y P ++ E + G S + I E A ED +++ + A
Sbjct: 8 SKEIGIVGYGAYVPMYRIRNEEIGRVWGVSN--FPI----EEKAVPGLDEDAVTIGIEAA 61
Query: 62 TNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNT-DIEGVDSTNACYGG 120
N L++ KIDP++I + GSE+ K ++K I E G T D+E D AC G
Sbjct: 62 RNALKRAKIDPREIRAIWFGSES---KPYAVKPSATIIAEAIGATPDLEAADFEFACKAG 118
Query: 121 TAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARP------TGGAAAVVMLVGPDAP 174
T AL + +V S +Y + + D+A RP T GA +VG +
Sbjct: 119 TEALQAAIGFVASGM--AKYAMAIGADTA-----QGRPADHLEFTAGAGGAAFIVGEKSS 171
Query: 175 ---VAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLS-QTCYLMALDTCYKCLCSKYEK 230
FE S+++ DF++ YP + + + Y + T K L +
Sbjct: 172 ETLAYFEGSY--SYVTDTPDFWR-RQHEHYPRHGNRFTGEPAYFHHVITAAKTLMDEL-- 226
Query: 231 LEGKQFSLSNADYFVFHSPYNKL 253
+ ++ DY VFH P K
Sbjct: 227 ----GLTPADFDYAVFHQPNVKF 245
>sp|P40830|PKSG_BACSU Polyketide biosynthesis 3-hydroxy-3-methylglutaryl-ACP synthase
PksG OS=Bacillus subtilis (strain 168) GN=pksG PE=1 SV=2
Length = 420
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 124/304 (40%), Gaps = 56/304 (18%)
Query: 51 EDVISMSLTAVTNLLEKY-KIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFG-NTDI 108
ED ++ + A +++ + + +I L SE+ ID KS+ T+ I E G N +
Sbjct: 49 EDPVTFGVNAAKPIIDALSEAEKDRIELLITCSESGIDFGKSLSTY---IHEYLGLNRNC 105
Query: 109 EGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVY--AEGP---------AR 157
+ ACY GTA VN++ S + G LV+ +D + + AEG A
Sbjct: 106 RLFEVKQACYSGTAGFQMAVNFILSQTSPGAKALVIASDISRFLIAEGGDALSEDWSYAE 165
Query: 158 PTGGAAAVVMLVGPDAPV-AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMA 216
P+ GA AV +LVG + V + G + D +P SE D LS Y
Sbjct: 166 PSAGAGAVAVLVGENPEVFQIDPGANGYYGYEVMDTCRPIPDSE--AGDSDLSLMSY--- 220
Query: 217 LDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEA 276
LD C + +++ G + Y +H+P+ +V+ + ++
Sbjct: 221 LDCCEQTFLEYQKRVPGANYQ-DTFQYLAYHTPFGGMVKGAHRTMM-------------- 265
Query: 277 AKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAAL 336
R + KV + + +V+P ++VGN+ A+L+ AL
Sbjct: 266 -------------------RKVAKVKTSGIETDFLTRVKPGLNYCQRVGNIMGAALFLAL 306
Query: 337 ASLI 340
AS I
Sbjct: 307 ASTI 310
>sp|O58410|Y677_PYRHO UPF0219 protein PH0677 OS=Pyrococcus horikoshii (strain ATCC 700860
/ DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=PH0677
PE=3 SV=1
Length = 350
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 108/262 (41%), Gaps = 36/262 (13%)
Query: 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVT 62
K+VGI+ Y P ++ E + G S + I E A ED I++ + A
Sbjct: 9 KDVGIVGYGAYVPMYRIRNEEIGRVWGISN--FPI----EEKAVPGLDEDAITIGIEAAR 62
Query: 63 NLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNT-DIEGVDSTNACYGGT 121
N L++ KIDPK I + GSE+ K ++K I E G T D+E D AC GT
Sbjct: 63 NALKRAKIDPKDIRAIWFGSES---KPYAVKPSSTVIAEAIGATPDLEAADFEFACKAGT 119
Query: 122 AALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARP------TGGAAAVVMLVG---PD 172
AL + +V S +Y + + D+A RP T GA ++G +
Sbjct: 120 EALQAAIGFVASGM--AKYAMAIGADTA-----QGRPGDHLEFTAGAGGAAFIIGEKSSE 172
Query: 173 APVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLS-QTCYLMALDTCYKCLCSKYEKL 231
FE S+++ DF++ YP + + + Y + T K L +
Sbjct: 173 TVAYFEGSY--SYVTDTPDFWR-RQHEHYPRHGNRFTGEPAYFHHVVTAAKTLMDEL--- 226
Query: 232 EGKQFSLSNADYFVFHSPYNKL 253
+ + DY VFH P K
Sbjct: 227 ---GLTPEDFDYAVFHQPNVKF 245
>sp|Q9HI87|Y1455_THEAC UPF0219 protein Ta1455 OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=Ta1455 PE=3 SV=1
Length = 351
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 18/219 (8%)
Query: 51 EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFG-NTDIE 109
EDV ++S+ A N L++ KIDPK+IG + VGSE+ ++K + G + +
Sbjct: 48 EDVATISVEAARNALKRKKIDPKEIGAIYVGSES---HPYAVKPTATIVGSAIGVDFSLF 104
Query: 110 GVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARP-TGGAAAVVML 168
D AC GTA + N V+S +YGL + D++ A G A + A +
Sbjct: 105 AADYEFACKAGTAGMQNVKAMVDSGMI--KYGLAIGADTSQGAPGDALEYSASAGGTAFI 162
Query: 169 VGPDAPVA-FESKLRGSHMSHAYDFYKPNLASEYPVVDGKLS-QTCYLMALDTCYKCLCS 226
+G D +A S L S S DF++ YP + + + Y + T K +
Sbjct: 163 IGKDDTIAEINSTL--SVASDTPDFWR-REGQPYPSHGERFTGEPAYFRHVITAAKMMME 219
Query: 227 KYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFND 265
+ E + K + DY VFH P K ++ L F +
Sbjct: 220 RME-TQPKDY-----DYVVFHQPNGKFPTRAAKMLGFEE 252
>sp|Q51798|Y972_PYRFU UPF0219 protein PF0972 OS=Pyrococcus furiosus (strain ATCC 43587 /
DSM 3638 / JCM 8422 / Vc1) GN=PF0972 PE=3 SV=1
Length = 350
Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 109/262 (41%), Gaps = 36/262 (13%)
Query: 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVT 62
K+VGI+ Y P ++ E + G S + I E A ED I++ + A
Sbjct: 9 KDVGIVGYGAYVPMYRIRNEEIGRVWGVSS--FPI----EEKAVPGLDEDAITIGIEAAR 62
Query: 63 NLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNT-DIEGVDSTNACYGGT 121
N L++ KIDP++I + G+E+ K ++K I E G T D+E D AC GT
Sbjct: 63 NALKRAKIDPQKIRAIWFGTES---KPYAVKPSATIIAEAIGATPDLEAADFEFACKAGT 119
Query: 122 AALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARP------TGGAAAVVMLVGP---D 172
AL + +V S Y + + D+A RP T GA +VG +
Sbjct: 120 EALQAAIGFVGSGM--AEYAMAIGADTA-----QGRPGDHLEFTAGAGGAAFIVGEKSNE 172
Query: 173 APVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLS-QTCYLMALDTCYKCLCSKYEKL 231
+ FE S+++ DF++ YP + + + Y + K L +
Sbjct: 173 SVAYFEGSY--SYVTDTPDFWR-RQHEHYPRHGNRFTGEPAYFHHIINAAKTL------M 223
Query: 232 EGKQFSLSNADYFVFHSPYNKL 253
E S+ DY VFH P K
Sbjct: 224 EELGLKPSDFDYAVFHQPNVKF 245
>sp|O30256|Y2415_ARCFU UPF0219 protein AF_2415 OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=AF_2415 PE=3 SV=2
Length = 343
Score = 61.6 bits (148), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 112/262 (42%), Gaps = 15/262 (5%)
Query: 5 VGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNL 64
+GI++ Y P ++ E + G K GLG + ED ++++ A
Sbjct: 2 IGIVSYGSYVPKFRIRVEEIARVWGEDAKKIKDGLGVHEKSVPGMDEDAATIAVEAAREA 61
Query: 65 LEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFG-NTDIEGVDSTNACYGGTAA 123
+ + I+P++IG + VGSE+ ++K + E G D D AC GTA
Sbjct: 62 IRRAGINPEEIGAVFVGSES---HPYAVKPTATIVGEALGVGNDYFAADLEFACKAGTAG 118
Query: 124 LFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLRG 183
+ C + V++ +YGL + D++ G A AA + + P+A E +
Sbjct: 119 MQICYSMVKAGMI--KYGLAIGADTSQARPGDALEYAAAAGGAAFIIGENPIA-EVEATY 175
Query: 184 SHMSHAYDFYKPNLASEYPVVDGKLSQ-TCYLMALDTCYKCLCSKYEKLEGKQFSLSNAD 242
S S DF++ +L YP G+ + Y + + K L KY + + + D
Sbjct: 176 SFTSDTPDFWRRDL-QPYPSHGGRFTGLPAYFRHVISAAKGLMEKY------GYKVEDFD 228
Query: 243 YFVFHSPYNKLVQKSFARLLFN 264
Y VFH P K ++ L F+
Sbjct: 229 YAVFHMPNAKFPVRAAKMLGFS 250
>sp|Q8ZVP4|Y2185_PYRAE UPF0219 protein PAE2185 OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827)
GN=PAE2185 PE=3 SV=1
Length = 350
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 104/217 (47%), Gaps = 22/217 (10%)
Query: 51 EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFG-NTDIE 109
ED +++++ A L++ I+PK+IG + VG+E+ K ++K + + G + ++
Sbjct: 50 EDAVTIAVEAARRALKRAGINPKRIGAVYVGTES---KPYAVKPISSILVDALGLSNNVF 106
Query: 110 GVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGP----ARPTGGAAAV 165
VD AC G+ L + VES + YG+ V TD++ G + +GGA+
Sbjct: 107 AVDMEFACKAGSEGLVAAIGLVESGRIE--YGMTVGTDTSQGEPGEHLEYSASSGGAS-- 162
Query: 166 VMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPV-VDGKLSQTCYLMALDTCYKCL 224
++VG D VA E + S++S DF++ S YP+ +G + Y + + L
Sbjct: 163 -LIVGRDGVVA-ELEAVYSYVSDTPDFWRRE-GSPYPMHGEGFTGEPAYFRHIIGAARGL 219
Query: 225 CSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARL 261
+Y + S+ Y VFH P + ++ + L
Sbjct: 220 MERY------GYKPSDFAYVVFHQPNGRFPVRAASML 250
>sp|C5A401|Y461_THEGJ UPF0219 protein TGAM_0461 OS=Thermococcus gammatolerans (strain DSM
15229 / JCM 11827 / EJ3) GN=TGAM_0461 PE=3 SV=1
Length = 350
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 108/262 (41%), Gaps = 36/262 (13%)
Query: 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVT 62
+ VGI+ Y P ++ E + G S + I E A ED +++ L A
Sbjct: 9 REVGIVGYGAYVPMYRIKAEEIGRVWGVSS--FPI----EEKAVPGLDEDALTIGLEAAR 62
Query: 63 NLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNT-DIEGVDSTNACYGGT 121
N L++ IDPK I + GSE+ K ++K I E G T D+ D AC GT
Sbjct: 63 NALKRAGIDPKLIRAVWFGSES---KPYAVKPTGTVIAEAIGATPDVSTADFEFACKAGT 119
Query: 122 AALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARP------TGGAAAVVMLVGP---D 172
AL + +V S D Y + + D+A RP T GA +VGP +
Sbjct: 120 EALQTAIGFVGSEMAD--YAMAIGADTA-----QGRPGDHLEFTAGAGGAAFIVGPKSSE 172
Query: 173 APVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLS-QTCYLMALDTCYKCLCSKYEKL 231
FE S+++ DF++ YP + + + Y + K L +
Sbjct: 173 TVAYFEGSY--SYVTDTPDFWR-RQHEHYPRHGNRFTGEPAYFHHIINAAKTL------M 223
Query: 232 EGKQFSLSNADYFVFHSPYNKL 253
E ++++ DY VFH P K
Sbjct: 224 EELGLTVNDFDYAVFHQPNVKF 245
>sp|A3MV40|Y1082_PYRCJ UPF0219 protein Pcal_1082 OS=Pyrobaculum calidifontis (strain JCM
11548 / VA1) GN=Pcal_1082 PE=3 SV=1
Length = 350
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 99/214 (46%), Gaps = 16/214 (7%)
Query: 51 EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNT-DIE 109
ED +++++ A + + IDP++IG + VG+E+ K ++K + + G T ++
Sbjct: 50 EDAVTIAVEAARRAIRRGGIDPRKIGAVYVGTES---KPYAVKPISSILIDALGLTNNVF 106
Query: 110 GVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARP-TGGAAAVVML 168
VD AC G+ L + VE+ + YG+ V TD++ G + + V ++
Sbjct: 107 AVDMEFACKAGSDGLVAAIGLVEAGRVE--YGMTVGTDTSQGEPGEHLEYSASSGGVALI 164
Query: 169 VGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPV-VDGKLSQTCYLMALDTCYKCLCSK 227
VG D VA E + + +S DF++ S YP+ +G + Y + K L K
Sbjct: 165 VGKDG-VAAELEAMYAFVSDTPDFWRRE-GSPYPMHGEGFTGEPAYFRHVIGAAKGLMEK 222
Query: 228 YEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARL 261
Y + S+ Y VFH P + ++ + L
Sbjct: 223 Y------GYKPSDFTYVVFHQPNGRFPVRAASML 250
>sp|C6A2L5|Y799_THESM UPF0219 protein TSIB_0799 OS=Thermococcus sibiricus (strain MM 739
/ DSM 12597) GN=TSIB_0799 PE=3 SV=1
Length = 350
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 111/257 (43%), Gaps = 26/257 (10%)
Query: 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVT 62
K+VGI+ Y P ++ E + G + G + + + ED I++ + A
Sbjct: 9 KDVGIVGYGAYVPMFRIKNEEIGRVWGVN------GFPIQEKSVNNLDEDAITIGIEAAR 62
Query: 63 NLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNT-DIEGVDSTNACYGGT 121
N L++ +I+P++I L G+E+ K ++K I E G T D++ D AC GT
Sbjct: 63 NALKRARINPREIRALWFGTES---KPYAVKPSATVIAEAIGATPDLDAADFEFACKAGT 119
Query: 122 AALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGP----ARPTGGAAAVVMLVGPDAPVAF 177
AL + +V S +Y + + D++ G GGAA +V D F
Sbjct: 120 EALQAAIGFVGSGM--AKYAMAIGADTSQGRPGDHLEFTASAGGAAYIVGEKTSDTLAYF 177
Query: 178 ESKLRGSHMSHAYDFYKPNLASEYPVVDGKLS-QTCYLMALDTCYKCLCSKYEKLEGKQF 236
E S+++ DF++ YP + + + Y + + K L +E +
Sbjct: 178 EGSY--SYVTDTPDFWR-RQHEHYPRHGNRFTGEPAYFHQIISAAKGL------MEELDY 228
Query: 237 SLSNADYFVFHSPYNKL 253
S S+ D+ VFH P K
Sbjct: 229 SPSDFDFAVFHQPNVKF 245
>sp|B6YXH7|Y1301_THEON UPF0219 protein TON_1301 OS=Thermococcus onnurineus (strain NA1)
GN=TON_1301 PE=3 SV=1
Length = 350
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 109/262 (41%), Gaps = 36/262 (13%)
Query: 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVT 62
K+VGI+ Y P ++ E + G S + I E A ED +++ + A
Sbjct: 9 KDVGIVGYGAYVPKYRIKAEEIGRVWGVSS--FPI----EEKAVPGLDEDALTIGIEAAR 62
Query: 63 NLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNT-DIEGVDSTNACYGGT 121
N L++ +IDPK I + GSE+ K ++K I E G T D+ D AC GT
Sbjct: 63 NALKRARIDPKLIRAVWFGSES---KPYAVKPTGTVIAEAIGATPDVSTADFEFACKAGT 119
Query: 122 AALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARP------TGGAAAVVMLVG---PD 172
AL + +V S D Y + + D+A RP T GA +VG +
Sbjct: 120 EALQTAIGFVGSGMAD--YAMAIGADTA-----QGRPGDHLEFTAGAGGAAFIVGEKSSE 172
Query: 173 APVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLS-QTCYLMALDTCYKCLCSKYEKL 231
FE S+++ DF++ YP + + + Y + K L +
Sbjct: 173 TVAYFEGSY--SYVTDTPDFWR-RQHEHYPRHGNRFTGEPAYFHHIINAAKTL------M 223
Query: 232 EGKQFSLSNADYFVFHSPYNKL 253
E ++++ DY VFH P K
Sbjct: 224 EELGLTVNDFDYAVFHQPNVKF 245
>sp|Q58941|Y1546_METJA UPF0219 protein MJ1546 OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=MJ1546 PE=3 SV=3
Length = 345
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 95/217 (43%), Gaps = 14/217 (6%)
Query: 51 EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEG 110
ED ++++ A N L++ +IDPK IG + VGSE+ K T + + + D+
Sbjct: 48 EDTATIAVEAARNALKRAEIDPKDIGAVYVGSESHPYAVKPTATIVAEAID--ATPDLTA 105
Query: 111 VDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPA-RPTGGAAAVVMLV 169
D AC GTA + C+ VES +YGL + D+A A G A T A ++
Sbjct: 106 ADLEFACKAGTAGIQMCMGLVESGLI--KYGLAIGADTAQGAPGDALEYTAAAGGAAYII 163
Query: 170 GPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLS-QTCYLMALDTCYKCLCSKY 228
G +A E S+ + DF++ YP G+ + + Y + K L
Sbjct: 164 GKSNVIA-EFNGTYSYTTDTPDFWR-REGKPYPRHGGRFTGEPAYFRHVINAAKGLM--- 218
Query: 229 EKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFND 265
EK+ K + DY VFH P K + L F +
Sbjct: 219 EKMGTKP---EDYDYCVFHQPNGKFYIRVAKILGFKE 252
>sp|Q97CG9|Y132_THEVO UPF0219 protein TV0132 OS=Thermoplasma volcanium (strain ATCC 51530
/ DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) GN=TV0132
PE=3 SV=1
Length = 351
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 113/264 (42%), Gaps = 18/264 (6%)
Query: 6 GILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLL 65
GI+ Y P ++ + + G + + G+ + + EDV ++S+ A N L
Sbjct: 3 GIVTYGSYIPRYRIKPDEIARVWGENPERIKNGIFILSKSVPAPDEDVATISVEAARNAL 62
Query: 66 EKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFG-NTDIEGVDSTNACYGGTAAL 124
++ KI+PK+IG + VGSE+ ++K + G + + D AC GTA +
Sbjct: 63 KRKKINPKEIGAIYVGSES---HPYAVKPTATIVGSAIGVDFSLFAADYEFACKAGTAGM 119
Query: 125 FNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARP-TGGAAAVVMLVGPDAPVA-FESKLR 182
N V++ +YGL + D++ A G A + A ++G D +A S L
Sbjct: 120 QNVKAMVDAGMI--KYGLAIGADTSQGAPGDALEYSASAGGSAFIIGKDDVIAEINSTL- 176
Query: 183 GSHMSHAYDFYKPNLASEYPVVDGKLS-QTCYLMALDTCYKCLCSKYEKLEGKQFSLSNA 241
S S DF++ YP + + + Y + K + + E + K +
Sbjct: 177 -SVASDTPDFWR-REGQPYPSHGERFTGEPAYFRHVVNAAKMMMERME-TQPKDY----- 228
Query: 242 DYFVFHSPYNKLVQKSFARLLFND 265
DY VFH P K ++ L F +
Sbjct: 229 DYVVFHQPNGKFPTRAAKLLGFEE 252
>sp|Q6L233|Y384_PICTO UPF0219 protein PTO0384 OS=Picrophilus torridus (strain ATCC 700027
/ DSM 9790 / JCM 10055 / NBRC 100828) GN=PTO0384 PE=3
SV=1
Length = 351
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 110/266 (41%), Gaps = 22/266 (8%)
Query: 6 GILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLL 65
GI+ Y P ++ E + G K G+ + EDV ++S+ A N L
Sbjct: 3 GIVTYGSYIPRYRIRPEEIARVWGEDPEKMKNGIFILSKSVPGPDEDVATISVEAARNAL 62
Query: 66 EKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQI----FEKFGNTDIEGVDSTNACYGGT 121
++ IDP IG + +GSE+ K T + F F D AC GT
Sbjct: 63 KRSNIDPNDIGAIYIGSESHPYAVKPTATIVAAAIGMPFRTF------AADYEFACKAGT 116
Query: 122 AALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPA-RPTGGAAAVVMLVGPDAPVAFESK 180
AA+ N V+S+ +YG+ + +D++ A G A T A M++G D +A +K
Sbjct: 117 AAMQNIKAMVDSNMI--KYGMAIGSDTSQGAPGDALEYTASAGGTAMVIGRDNVIAEINK 174
Query: 181 LRGSHMSHAYDFYKPNLASEYPVVDGKLS-QTCYLMALDTCYKCLCSKYEKLEGKQFSLS 239
S + DF++ YP + + + Y + + + S +L K
Sbjct: 175 TI-SVATDTPDFWR-REGEPYPKHGERFTGEPGYFKHVIGAARDIMS---ELNTKP---D 226
Query: 240 NADYFVFHSPYNKLVQKSFARLLFND 265
+ DY VFH P K ++ L F +
Sbjct: 227 DYDYVVFHQPNGKFPTRAAKILGFRE 252
>sp|Q971K8|Y1349_SULTO UPF0219 protein STK_13490 OS=Sulfolobus tokodaii (strain DSM 16993
/ JCM 10545 / NBRC 100140 / 7) GN=STK_13490 PE=3 SV=1
Length = 348
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 15/218 (6%)
Query: 39 LGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQ 98
LG A S ED +M+ A N L + KIDP +I + GSE+ + K T
Sbjct: 36 LGLMEKAVPSHDEDSTTMAWEAARNALMRAKIDPSEIKAVLFGSESKVYAVKPTSTI--- 92
Query: 99 IFEKFG-NTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPA- 156
I + G + + D AC + L VE++ +YGLV+ +D A G
Sbjct: 93 IIDSLGISHETLSADLEFACRAASVGLRLLSGMVEANRI--KYGLVIGSDVAQSNPGDVL 150
Query: 157 RPTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLS-QTCYLM 215
+ AA+V +VGP + + S+ + DF++ + YP+ + + Y
Sbjct: 151 ELSSAAASVAYIVGPADESSAIIEYATSYTTDMPDFWRRD-GMPYPLHGEAFTGEPAYFA 209
Query: 216 ALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKL 253
+ + + L L+ +S+S+ DYFVFH P K
Sbjct: 210 HIISAVQLL------LKEGGYSISDFDYFVFHQPNGKF 241
>sp|Q5JFL6|Y181_PYRKO UPF0219 protein TK0181 OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=TK0181 PE=3 SV=1
Length = 350
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 111/257 (43%), Gaps = 26/257 (10%)
Query: 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVT 62
+ VGI+ Y P ++ E + G G + + ++ + E D I++ + A
Sbjct: 9 REVGIIGYGAYVPMYRIKAEEI----GRVWGVSSFPIQEKSVPGLDE--DTITIGIEAAR 62
Query: 63 NLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNT-DIEGVDSTNACYGGT 121
N L++ +IDPK I + +G+E+ K ++K I E G T D++ D AC GT
Sbjct: 63 NALKRAQIDPKLIRAIWLGTES---KPYAVKPSGTVIAEAIGATPDLDAADFEFACKAGT 119
Query: 122 AALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGP----ARPTGGAAAVVMLVGPDAPVAF 177
A+ + +V S D Y + + D++ G GGAA ++ + F
Sbjct: 120 EAIQAAIGFVGSGMAD--YAMAIGADTSQGRPGDHLEFTAAAGGAAYILAPKSSETLAYF 177
Query: 178 ESKLRGSHMSHAYDFYKPNLASEYPVVDGKLS-QTCYLMALDTCYKCLCSKYEKLEGKQF 236
E+ S+++ DF++ YP + + + Y + K L +E +
Sbjct: 178 EASY--SYVTDTPDFWR-RQHEHYPRHGNRFTGEPAYFHQIINAAKTL------MEELGY 228
Query: 237 SLSNADYFVFHSPYNKL 253
+ ++ DY VFH P K
Sbjct: 229 TPNDFDYAVFHQPNVKF 245
>sp|A8ME61|Y1240_CALMQ UPF0219 protein Cmaq_1240 OS=Caldivirga maquilingensis (strain ATCC
700844 / DSMZ 13496 / JCM 10307 / IC-167) GN=Cmaq_1240
PE=3 SV=1
Length = 349
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 116/250 (46%), Gaps = 20/250 (8%)
Query: 5 VGILAMDIYFPPTCVQ-QEALEAH-DGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVT 62
VGI+ Y P ++ +E EA D A + + + ++ + + E D ++M++ A
Sbjct: 3 VGIVGWGAYIPRYRIKTREIAEAWGDDALRIRDMYLVEEKAVGYIDE--DPVTMAVEASR 60
Query: 63 NLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFG-NTDIEGVDSTNACYGGT 121
+ L + + P ++G + G+E+ K ++K + + G N + VD AC G+
Sbjct: 61 DALIRAGVKPSEVGAVFAGTES---KPYAVKPISSILIDALGLNRQVYSVDMEFACKAGS 117
Query: 122 AALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARP-TGGAAAVVMLVGPDAPVAFESK 180
A+ N + V+++S +YG+ V TDS+ G T G AV ++G + +A E K
Sbjct: 118 DAIINLMGLVKANSI--KYGIAVGTDSSQGEPGEHLEYTVGTGAVAYVIG-SSNLAAEIK 174
Query: 181 LRGSHMSHAYDFYKPNLASEYPV-VDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLS 239
+ S DF++ + +S YPV +G + Y + K L + +
Sbjct: 175 YTYPYASDTPDFWRRD-SSPYPVHGEGFTGEPAYFKHIIGAAKGLMDEL------GMKPN 227
Query: 240 NADYFVFHSP 249
+ DY VFH P
Sbjct: 228 DFDYAVFHQP 237
>sp|A4WJ12|Y793_PYRAR UPF0219 protein Pars_0793 OS=Pyrobaculum arsenaticum (strain DSM
13514 / JCM 11321) GN=Pars_0793 PE=3 SV=1
Length = 349
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 16/214 (7%)
Query: 51 EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFG-NTDIE 109
ED +++++ A + + IDPK+IG + G+E+ K ++K + + G + ++
Sbjct: 49 EDAVTIAVEAARRAIRRAGIDPKKIGAVYAGTES---KPYAVKPISSILVDALGLSNNVF 105
Query: 110 GVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARP-TGGAAAVVML 168
VD AC G+ L + V++ + YG+ V TD++ G + + V ++
Sbjct: 106 AVDMEFACKAGSEGLVAAIGLVKAGQVE--YGMTVGTDTSQGEPGEHLEYSASSGGVALI 163
Query: 169 VGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPV-VDGKLSQTCYLMALDTCYKCLCSK 227
VG D VA E + S++S DF++ S YP+ +G + Y + K L K
Sbjct: 164 VGRDG-VAAELEAVYSYVSDTPDFWRRE-GSPYPMHGEGFTGEPAYFRHIIGAAKGLMEK 221
Query: 228 YEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARL 261
Y + S+ Y VFH P + ++ + L
Sbjct: 222 Y------GYKPSDFAYVVFHQPNGRFPVRAASML 249
>sp|Q8PYJ0|Y871_METMA UPF0219 protein MM_0871 OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=MM_0871 PE=3 SV=1
Length = 349
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 91/223 (40%), Gaps = 26/223 (11%)
Query: 51 EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNT-DIE 109
ED ++++ A N + + +DP +IG + GSE+ K T + Q G T +
Sbjct: 49 EDAATIAVEAARNAMIRSGVDPSRIGAVYTGSESHPYAVKPTSTIVAQ---AIGATPQMT 105
Query: 110 GVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARP-TGGAAAVVML 168
D AC GTAA+ C+ V S D GL + D + A A T A V L
Sbjct: 106 AADFEFACKAGTAAVQACMGLVGSGMVD--LGLAIGADVSQGAPSDALEYTAAAGGVACL 163
Query: 169 VGPDAPVAFESKLRG------SHMSHAYDFYKPNLASEYPVVDGKLS-QTCYLMALDTCY 221
+G + ES+L S + DF++ YP G+ + + Y +
Sbjct: 164 IGRN-----ESELAAIIEDTYSFTTDTPDFWR-REGMPYPEHGGRFTGEPGYFKHVTNGA 217
Query: 222 KCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFN 264
K L EKL K + DY VFH P K K+ L F
Sbjct: 218 KGLL---EKLGAKP---EDYDYAVFHQPNGKFPSKAAKMLGFT 254
>sp|A4FWW6|Y379_METM5 UPF0219 protein MmarC5_0379 OS=Methanococcus maripaludis (strain C5
/ ATCC BAA-1333) GN=MmarC5_0379 PE=3 SV=1
Length = 349
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 105/267 (39%), Gaps = 16/267 (5%)
Query: 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVT 62
K VGI+ P ++ E + G GL + ED ++S+ A
Sbjct: 2 KEVGIVGYGSDLPKYRIKAEDIAGAWGKDAQAIKRGLVVNEKSVPGPDEDTATISVQAAR 61
Query: 63 NLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFG-NTDIEGVDSTNACYGGT 121
L + I+PK IG + VGSE+ ++K + E G + D D AC GT
Sbjct: 62 RALSRAGINPKDIGAVYVGSES---HPYAVKPTSGIVAEACGVSPDFTAADLEFACKAGT 118
Query: 122 AALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKL 181
A + C+ V S + Y + V D+A A G A AA + F +K
Sbjct: 119 AGMQMCMGLVGSEMME--YAMAVGADTAQGAPGDALEYTAAAGGAAYIIGAKKEEFIAKF 176
Query: 182 RG--SHMSHAYDFYKPNLASEYPVVDGKLS-QTCYLMALDTCYKCLCSKYEKLEGKQFSL 238
G S+ + DF++ YP G+ + + Y + K + +K + +
Sbjct: 177 NGTYSYTTDTPDFWRRE-HEHYPKHGGRFTGEPAYFKHVLNGAKGMMAKMDT------TA 229
Query: 239 SNADYFVFHSPYNKLVQKSFARLLFND 265
+ DY VFH P K + +L F +
Sbjct: 230 KDYDYCVFHQPNGKFYISAAKQLGFTE 256
>sp|Q46F10|Y551_METBF UPF0219 protein Mbar_A0551 OS=Methanosarcina barkeri (strain Fusaro
/ DSM 804) GN=Mbar_A0551 PE=3 SV=1
Length = 349
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 105/273 (38%), Gaps = 32/273 (11%)
Query: 4 NVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEV----EDVISMSLT 59
+GI++ Y P ++ E + G GL M + V ED ++++
Sbjct: 2 TIGIVSYGAYVPRYRIKVEEIARVWGDDANALKSGL----MVYEKSVPDIDEDAATIAVE 57
Query: 60 AVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYG 119
A + + +DP++IG + GSE+ K T + Q N + D AC
Sbjct: 58 AARYAMTRSGVDPERIGAVYTGSESHPYAVKPTSTIVSQAIGATPN--MTAADFEFACKA 115
Query: 120 GTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARP-TGGAAAVVMLVGPDAPVAFE 178
GTAA+ C+ V S D G+ + D + A G A T A V L+G E
Sbjct: 116 GTAAVQACMGLVSSGMID--LGMAIGADVSQGAPGDALEYTAAAGGVACLIGKK-----E 168
Query: 179 SKLRG------SHMSHAYDFYKPNLASEYPVVDGKLS-QTCYLMALDTCYKCLCSKYEKL 231
S+L S + DF++ YP G+ + + Y + K L +K
Sbjct: 169 SELAAIIEDTYSFTTDTPDFWR-REGMPYPEHGGRFTGEPGYFKHVTNGAKGLLNKLGT- 226
Query: 232 EGKQFSLSNADYFVFHSPYNKLVQKSFARLLFN 264
+ DY VFH P K K+ L F
Sbjct: 227 -----KPEDYDYAVFHQPNGKFPTKAAKTLGFT 254
>sp|A6UPL1|Y526_METVS UPF0219 protein Mevan_0526 OS=Methanococcus vannielii (strain SB /
ATCC 35089 / DSM 1224) GN=Mevan_0526 PE=3 SV=1
Length = 349
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 103/266 (38%), Gaps = 14/266 (5%)
Query: 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVT 62
K VGI+ P ++ E + G GL + ED ++++ A
Sbjct: 2 KEVGIVGYGSDLPKYRIKAEEIAKAWGKDAEAIKKGLVVNEKSVPGPDEDSATIAVQAAR 61
Query: 63 NLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTA 122
L + I+PK IG + VGSE+ K + + + ++ D AC GTA
Sbjct: 62 RALSRSGINPKNIGAVYVGSESHPYAVKPTSGIVAEAV--CTSPEVTAADLEFACKAGTA 119
Query: 123 ALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAPVAFESKLR 182
+ C+ V S D Y + V D+A A G A AA + +K
Sbjct: 120 GIQMCMGLVSSGMMD--YAMAVGVDTAQGAPGDALEYTAAAGGAAYIIGGKKEELIAKFN 177
Query: 183 G--SHMSHAYDFYKPNLASEYPVVDGKLS-QTCYLMALDTCYKCLCSKYEKLEGKQFSLS 239
G S+ + DF++ YP G+ + + Y + + K + K + +
Sbjct: 178 GTYSYTTDTPDFWRRE-HEHYPKHGGRFTGEPAYFRHVLSAAKGMMEKMDT------TTK 230
Query: 240 NADYFVFHSPYNKLVQKSFARLLFND 265
+ DY VFH P K + +L FN+
Sbjct: 231 DYDYCVFHQPNGKFYLSAAKQLGFNE 256
>sp|C3N6F6|Y1703_SULIA UPF0219 protein M1627_1703 OS=Sulfolobus islandicus (strain
M.16.27) GN=M1627_1703 PE=3 SV=1
Length = 350
Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 109/254 (42%), Gaps = 20/254 (7%)
Query: 6 GILAMDIYFPPTCVQQEALEAHDGASKGKY-TIGLGQECMAFCSEVEDVISMSLTAVTNL 64
GIL Y P ++ E + G +G ++GL ++ + ED +++ + N
Sbjct: 4 GILGWGAYVPRYRIKVEDIAKMWGYDEGVVRSLGLTEKSVP--GHDEDSTTIAWESSINA 61
Query: 65 LEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFG-NTDIEGVDSTNACYGGTAA 123
+++ ++DP +I + GSE+ + K T L+ + G N D AC +
Sbjct: 62 IKRAQVDPSKIRLVLFGSESKVYAVKPTSTILI---DALGINNYSATADMEFACRAASVG 118
Query: 124 LFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAA-VVMLVG--PDAPVAFESK 180
L ++V +S Y LV+ D+A G AAA V +VG + A +
Sbjct: 119 LRLASSFVLHNS--DSYALVIGADTAQSNPGDVLELSSAAAGVAFVVGNVDEKHSAAVIE 176
Query: 181 LRGSHMSHAYDFYKPNLASEYPVV-DGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLS 239
S+ S DF++ + + YPV +G + Y + + + + L+ +S
Sbjct: 177 YSSSYTSDTPDFWRRD-GTPYPVHGEGFTGEPAYF------HHIISAVSDLLQNSGLKIS 229
Query: 240 NADYFVFHSPYNKL 253
+ DYFVFH P K
Sbjct: 230 DFDYFVFHQPNGKF 243
>sp|C3MQN6|Y1695_SULIL UPF0219 protein LS215_1695 OS=Sulfolobus islandicus (strain
L.S.2.15 / Lassen #1) GN=LS215_1695 PE=3 SV=1
Length = 350
Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 109/254 (42%), Gaps = 20/254 (7%)
Query: 6 GILAMDIYFPPTCVQQEALEAHDGASKGKY-TIGLGQECMAFCSEVEDVISMSLTAVTNL 64
GIL Y P ++ E + G +G ++GL ++ + ED +++ + N
Sbjct: 4 GILGWGAYVPRYRIKVEDIAKMWGYDEGVVRSLGLTEKSVP--GHDEDSTTIAWESSINA 61
Query: 65 LEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFG-NTDIEGVDSTNACYGGTAA 123
+++ ++DP +I + GSE+ + K T L+ + G N D AC +
Sbjct: 62 IKRAQVDPSKIRLVLFGSESKVYAVKPTSTILI---DALGINNYSATADMEFACRAASVG 118
Query: 124 LFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAA-VVMLVG--PDAPVAFESK 180
L ++V +S Y LV+ D+A G AAA V +VG + A +
Sbjct: 119 LRLASSFVLHNS--DSYALVIGADTAQSNPGDVLELSSAAAGVAFVVGNVDEKHSAAVIE 176
Query: 181 LRGSHMSHAYDFYKPNLASEYPVV-DGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLS 239
S+ S DF++ + + YPV +G + Y + + + + L+ +S
Sbjct: 177 YSSSYTSDTPDFWRRD-GTPYPVHGEGFTGEPAYF------HHIISAVSDLLQNSGLKIS 229
Query: 240 NADYFVFHSPYNKL 253
+ DYFVFH P K
Sbjct: 230 DFDYFVFHQPNGKF 243
>sp|C3NEW4|Y1591_SULIY UPF0219 protein YG5714_1591 OS=Sulfolobus islandicus (strain
Y.G.57.14 / Yellowstone #1) GN=YG5714_1591 PE=3 SV=1
Length = 350
Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 109/254 (42%), Gaps = 20/254 (7%)
Query: 6 GILAMDIYFPPTCVQQEALEAHDGASKGKY-TIGLGQECMAFCSEVEDVISMSLTAVTNL 64
GIL Y P ++ E + G +G ++GL ++ + ED +++ + N
Sbjct: 4 GILGWGAYVPRYRIKVEDIAKMWGYDEGVVRSLGLTEKSVP--GHDEDSTTIAWESSINA 61
Query: 65 LEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFG-NTDIEGVDSTNACYGGTAA 123
+++ ++DP +I + GSE+ + K T L+ + G N D AC +
Sbjct: 62 IKRAQVDPSKIRLVLFGSESKVYAVKPTSTILI---DALGINNYSATADMEFACRAASVG 118
Query: 124 LFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAA-VVMLVG--PDAPVAFESK 180
L ++V +S Y LV+ D+A G AAA V +VG + A +
Sbjct: 119 LRLASSFVLHNS--DSYALVIGADTAQSNPGDVLELSSAAAGVAFVVGNVDEKHSAAVIE 176
Query: 181 LRGSHMSHAYDFYKPNLASEYPVV-DGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLS 239
S+ S DF++ + + YPV +G + Y + + + + L+ +S
Sbjct: 177 YSSSYTSDTPDFWRRD-GTPYPVHGEGFTGEPAYF------HHIISAVSDLLQNSGLKIS 229
Query: 240 NADYFVFHSPYNKL 253
+ DYFVFH P K
Sbjct: 230 DFDYFVFHQPNGKF 243
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 127,943,168
Number of Sequences: 539616
Number of extensions: 5184811
Number of successful extensions: 13113
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 12991
Number of HSP's gapped (non-prelim): 70
length of query: 354
length of database: 191,569,459
effective HSP length: 118
effective length of query: 236
effective length of database: 127,894,771
effective search space: 30183165956
effective search space used: 30183165956
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)