Query 018515
Match_columns 354
No_of_seqs 205 out of 1684
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 09:39:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018515.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018515hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02577 hydroxymethylglutaryl 100.0 6.8E-62 1.5E-66 484.4 29.5 341 1-344 1-344 (459)
2 COG0332 FabH 3-oxoacyl-[acyl-c 100.0 1.8E-61 4E-66 460.4 22.5 279 3-344 2-297 (323)
3 TIGR01833 HMG-CoA-S_euk 3-hydr 100.0 2.6E-58 5.6E-63 458.2 29.2 342 4-345 1-347 (454)
4 COG3425 PksG 3-hydroxy-3-methy 100.0 2.9E-54 6.3E-59 412.7 22.3 290 3-349 1-292 (377)
5 PRK12880 3-oxoacyl-(acyl carri 100.0 6.1E-52 1.3E-56 404.6 25.8 284 2-347 5-320 (353)
6 TIGR01835 HMG-CoA-S_prok 3-hyd 100.0 2.3E-50 4.9E-55 397.1 27.3 288 5-343 1-290 (379)
7 PRK05963 3-oxoacyl-(acyl carri 100.0 2.2E-49 4.7E-54 382.5 25.8 277 3-343 2-300 (326)
8 PRK04262 hypothetical protein; 100.0 1.5E-48 3.2E-53 380.2 25.3 283 3-345 1-286 (347)
9 TIGR00748 HMG_CoA_syn_Arc hydr 100.0 2.4E-48 5.3E-53 378.4 25.2 285 4-348 1-288 (345)
10 PRK07204 3-oxoacyl-(acyl carri 100.0 4.6E-47 1E-51 366.7 26.9 283 1-343 1-303 (329)
11 CHL00203 fabH 3-oxoacyl-acyl-c 100.0 1.2E-46 2.6E-51 363.7 25.7 281 3-344 1-300 (326)
12 PLN03169 chalcone synthase fam 100.0 7.7E-47 1.7E-51 373.1 23.2 282 3-344 20-360 (391)
13 PLN02326 3-oxoacyl-[acyl-carri 100.0 2.7E-46 5.8E-51 368.4 26.2 281 3-344 46-354 (379)
14 PRK12879 3-oxoacyl-(acyl carri 100.0 2.1E-45 4.6E-50 354.1 26.4 280 1-343 1-298 (325)
15 PRK09258 3-oxoacyl-(acyl carri 100.0 1.8E-45 3.9E-50 356.8 24.6 276 3-343 4-312 (338)
16 KOG1393 Hydroxymethylglutaryl- 100.0 3.4E-45 7.3E-50 344.2 25.4 342 3-348 10-353 (462)
17 PRK06816 3-oxoacyl-(acyl carri 100.0 2.9E-45 6.3E-50 360.9 23.0 286 3-344 1-351 (378)
18 cd00831 CHS_like Chalcone and 100.0 4.6E-45 1E-49 357.3 20.7 282 5-344 2-338 (361)
19 PRK06840 hypothetical protein; 100.0 6.3E-44 1.4E-48 346.3 26.4 279 1-343 1-309 (339)
20 cd00830 KAS_III Ketoacyl-acyl 100.0 1.2E-43 2.6E-48 340.6 25.3 278 4-344 1-297 (320)
21 PLN03171 chalcone synthase-lik 100.0 1.3E-43 2.9E-48 350.8 23.2 281 4-343 22-363 (399)
22 TIGR00747 fabH 3-oxoacyl-(acyl 100.0 1.3E-42 2.7E-47 334.0 26.0 278 3-343 1-292 (318)
23 PLN03168 chalcone synthase; Pr 100.0 2.3E-42 4.9E-47 340.8 22.5 275 4-342 15-351 (389)
24 PLN03172 chalcone synthase fam 100.0 7.4E-42 1.6E-46 337.3 22.8 273 5-341 17-351 (393)
25 PLN03173 chalcone synthase; Pr 100.0 1.6E-41 3.4E-46 334.7 23.1 273 5-341 17-351 (391)
26 PRK09352 3-oxoacyl-(acyl carri 100.0 8.2E-41 1.8E-45 321.4 26.4 278 3-343 2-292 (319)
27 PRK07515 3-oxoacyl-(acyl carri 100.0 4.8E-41 1E-45 330.3 25.0 278 4-342 2-346 (372)
28 PLN03170 chalcone synthase; Pr 100.0 2.7E-41 5.8E-46 334.3 19.9 273 5-341 21-355 (401)
29 cd00827 init_cond_enzymes "ini 100.0 9.6E-40 2.1E-44 314.1 24.9 281 4-344 1-301 (324)
30 PLN02932 3-ketoacyl-CoA syntha 100.0 2E-36 4.3E-41 302.6 23.4 281 3-344 66-428 (478)
31 PLN02377 3-ketoacyl-CoA syntha 100.0 1.7E-35 3.7E-40 297.4 24.1 286 3-344 96-452 (502)
32 PLN02854 3-ketoacyl-CoA syntha 100.0 2.2E-35 4.8E-40 296.8 24.5 282 3-344 112-468 (521)
33 COG3424 BcsA Predicted naringe 100.0 4.8E-35 1E-39 270.0 16.2 278 5-342 2-326 (356)
34 PF01154 HMG_CoA_synt_N: Hydro 100.0 1.6E-34 3.5E-39 250.8 14.8 172 2-173 2-173 (174)
35 PLN02192 3-ketoacyl-CoA syntha 100.0 2.6E-33 5.7E-38 281.2 20.0 165 3-172 100-299 (511)
36 PLN00415 3-ketoacyl-CoA syntha 100.0 5.4E-32 1.2E-36 268.1 21.2 288 3-342 58-412 (466)
37 cd00327 cond_enzymes Condensin 99.9 1.8E-26 4E-31 213.9 15.6 210 51-343 5-223 (254)
38 PF00195 Chal_sti_synt_N: Chal 99.9 2.7E-25 5.8E-30 202.2 14.1 166 3-173 13-226 (226)
39 cd00825 decarbox_cond_enzymes 99.9 1.8E-24 3.8E-29 208.4 13.0 222 53-346 11-286 (332)
40 PF08540 HMG_CoA_synt_C: Hydro 99.9 1.4E-22 3.1E-27 190.4 8.1 167 177-343 3-173 (282)
41 PRK06147 3-oxoacyl-(acyl carri 99.8 3.2E-20 6.9E-25 181.1 17.0 225 1-251 1-264 (348)
42 PF08392 FAE1_CUT1_RppA: FAE1/ 99.8 1.6E-18 3.5E-23 162.2 15.8 166 3-173 7-207 (290)
43 TIGR02845 spore_V_AD stage V s 99.8 1E-17 2.2E-22 158.8 16.2 222 3-263 8-247 (327)
44 PRK08304 stage V sporulation p 99.7 6.5E-16 1.4E-20 146.9 16.6 219 4-263 15-253 (337)
45 cd00834 KAS_I_II Beta-ketoacyl 99.6 1.4E-14 3E-19 143.7 19.7 173 52-252 70-306 (406)
46 smart00825 PKS_KS Beta-ketoacy 99.5 6.1E-14 1.3E-18 140.1 13.9 170 53-250 87-308 (424)
47 cd00829 SCP-x_thiolase Thiolas 99.5 7.2E-13 1.6E-17 130.4 19.9 94 50-148 13-106 (375)
48 PRK06064 acetyl-CoA acetyltran 99.5 7E-13 1.5E-17 131.4 18.8 95 49-148 18-114 (389)
49 cd00751 thiolase Thiolase are 99.5 7.5E-14 1.6E-18 138.2 10.7 97 49-149 18-114 (386)
50 PRK06501 3-oxoacyl-(acyl carri 99.5 2.6E-12 5.7E-17 128.8 20.1 227 3-262 11-329 (425)
51 TIGR01930 AcCoA-C-Actrans acet 99.4 4.9E-13 1.1E-17 132.4 11.6 96 50-149 18-113 (386)
52 cd00833 PKS polyketide synthas 99.4 1.3E-12 2.9E-17 130.0 13.9 170 53-250 87-308 (421)
53 PRK12404 stage V sporulation p 99.4 2.4E-12 5.3E-17 122.0 14.7 222 3-263 12-251 (334)
54 PRK05656 acetyl-CoA acetyltran 99.4 1.2E-12 2.6E-17 129.9 12.1 98 49-150 22-119 (393)
55 PRK07108 acetyl-CoA acetyltran 99.4 1.5E-12 3.3E-17 129.1 11.5 98 49-150 23-121 (392)
56 PF08545 ACP_syn_III: 3-Oxoacy 99.4 3.6E-13 7.8E-18 103.8 4.4 60 111-172 1-64 (80)
57 cd00828 elong_cond_enzymes "el 99.4 8.5E-12 1.8E-16 124.0 15.3 172 52-252 71-305 (407)
58 PRK12578 acetyl-CoA acetyltran 99.4 4.4E-12 9.4E-17 125.6 12.3 96 49-149 17-112 (385)
59 PRK08235 acetyl-CoA acetyltran 99.4 3.7E-12 8E-17 126.4 11.4 98 49-150 22-119 (393)
60 PRK09051 beta-ketothiolase; Pr 99.4 4.4E-12 9.5E-17 125.9 11.7 98 49-150 23-121 (394)
61 PRK06205 acetyl-CoA acetyltran 99.4 3.6E-12 7.8E-17 127.0 11.0 97 50-150 23-119 (404)
62 PRK08313 acetyl-CoA acetyltran 99.3 4.4E-12 9.6E-17 125.6 11.0 94 49-148 20-115 (386)
63 PRK09052 acetyl-CoA acetyltran 99.3 7.2E-12 1.6E-16 124.5 11.8 97 50-150 28-126 (399)
64 PRK08242 acetyl-CoA acetyltran 99.3 9.9E-12 2.1E-16 123.5 11.9 98 49-150 24-122 (402)
65 PRK06059 lipid-transfer protei 99.3 1E-11 2.2E-16 123.6 11.4 95 50-149 20-115 (399)
66 PF08541 ACP_syn_III_C: 3-Oxoa 99.3 3.3E-12 7.1E-17 100.5 5.0 64 225-343 1-64 (90)
67 PRK05790 putative acyltransfer 99.3 2.3E-11 5E-16 120.8 11.6 96 50-149 23-118 (393)
68 PRK08170 acetyl-CoA acetyltran 99.3 2.4E-11 5.1E-16 121.9 11.6 96 50-149 24-119 (426)
69 cd00826 nondecarbox_cond_enzym 99.3 2.7E-11 5.9E-16 120.2 11.1 95 50-149 20-115 (393)
70 TIGR03150 fabF beta-ketoacyl-a 99.2 1.9E-10 4.1E-15 114.3 16.6 171 53-251 71-305 (407)
71 PRK06289 acetyl-CoA acetyltran 99.2 5.4E-11 1.2E-15 118.5 10.8 98 45-149 18-120 (403)
72 PRK06954 acetyl-CoA acetyltran 99.2 7E-11 1.5E-15 117.4 11.1 97 50-150 28-124 (397)
73 PRK06690 acetyl-CoA acetyltran 99.2 5.9E-10 1.3E-14 109.3 16.9 92 50-150 22-113 (361)
74 PRK06065 acetyl-CoA acetyltran 99.2 9.3E-11 2E-15 116.3 11.2 94 49-148 25-120 (392)
75 PRK05952 3-oxoacyl-(acyl carri 99.2 2.4E-09 5.3E-14 105.9 20.1 219 3-252 2-285 (381)
76 PRK07103 polyketide beta-ketoa 99.2 7.3E-10 1.6E-14 110.7 16.2 170 53-252 80-312 (410)
77 PRK08722 3-oxoacyl-(acyl carri 99.2 3.1E-09 6.6E-14 106.3 20.5 170 54-251 75-308 (414)
78 PRK06158 thiolase; Provisional 99.2 1.7E-10 3.7E-15 114.2 10.7 88 49-145 24-111 (384)
79 PLN02287 3-ketoacyl-CoA thiola 99.2 2.4E-10 5.2E-15 115.2 11.8 97 49-149 67-164 (452)
80 PRK09185 3-oxoacyl-(acyl carri 99.2 9E-10 2E-14 109.4 15.8 133 90-252 137-291 (392)
81 PF00108 Thiolase_N: Thiolase, 99.1 3.7E-10 8E-15 106.3 11.5 98 49-150 22-119 (264)
82 PRK07516 acetyl-CoA acetyltran 99.1 3.4E-10 7.3E-15 112.3 11.2 96 49-149 18-115 (389)
83 PRK07661 acetyl-CoA acetyltran 99.1 4E-10 8.6E-15 111.8 11.2 97 50-150 24-121 (391)
84 PRK07314 3-oxoacyl-(acyl carri 99.1 2.2E-09 4.7E-14 107.0 16.5 172 53-252 72-307 (411)
85 PRK06445 acetyl-CoA acetyltran 99.1 7.4E-10 1.6E-14 110.1 10.1 94 50-149 29-125 (394)
86 PRK08439 3-oxoacyl-(acyl carri 99.0 7.9E-09 1.7E-13 103.1 17.2 114 53-172 72-242 (406)
87 PRK06333 3-oxoacyl-(acyl carri 99.0 6.9E-09 1.5E-13 103.9 16.8 171 53-251 82-318 (424)
88 PLN02836 3-oxoacyl-[acyl-carri 99.0 7.9E-09 1.7E-13 104.1 17.0 172 53-252 93-330 (437)
89 PF02797 Chal_sti_synt_C: Chal 99.0 4.3E-10 9.3E-15 97.0 6.3 78 212-341 37-114 (151)
90 PRK09116 3-oxoacyl-(acyl carri 99.0 9.6E-09 2.1E-13 102.5 15.9 167 53-250 73-304 (405)
91 PRK07851 acetyl-CoA acetyltran 99.0 2.1E-09 4.6E-14 107.2 11.2 95 50-149 24-120 (406)
92 PTZ00050 3-oxoacyl-acyl carrie 99.0 1.3E-08 2.9E-13 101.9 15.3 170 52-250 76-313 (421)
93 cd00832 CLF Chain-length facto 99.0 1.8E-08 3.8E-13 100.4 15.6 166 53-250 71-299 (399)
94 PRK08256 lipid-transfer protei 98.9 4.4E-09 9.6E-14 104.4 10.1 92 50-149 19-110 (391)
95 PRK06157 acetyl-CoA acetyltran 98.9 7.4E-09 1.6E-13 103.0 11.4 95 50-149 24-118 (398)
96 PRK08963 fadI 3-ketoacyl-CoA t 98.9 5.8E-09 1.3E-13 104.7 10.6 98 49-150 25-122 (428)
97 PRK07967 3-oxoacyl-(acyl carri 98.9 1.5E-07 3.2E-12 94.0 20.2 113 53-171 71-241 (406)
98 PRK08131 acetyl-CoA acetyltran 98.9 9.6E-09 2.1E-13 102.3 11.4 97 50-150 23-120 (401)
99 PLN02787 3-oxoacyl-[acyl-carri 98.9 3.6E-08 7.8E-13 101.4 15.5 168 54-250 200-434 (540)
100 PRK07850 acetyl-CoA acetyltran 98.9 1.6E-08 3.5E-13 100.2 11.6 97 50-150 23-120 (387)
101 PRK06633 acetyl-CoA acetyltran 98.9 9E-09 2E-13 102.1 9.7 97 50-150 24-120 (392)
102 PRK06366 acetyl-CoA acetyltran 98.9 1.5E-08 3.2E-13 100.6 11.3 96 50-149 23-118 (388)
103 PRK09050 beta-ketoadipyl CoA t 98.9 1.4E-08 2.9E-13 101.2 10.9 97 50-150 23-121 (401)
104 PLN02644 acetyl-CoA C-acetyltr 98.9 1.9E-08 4.2E-13 99.9 11.7 96 50-149 22-117 (394)
105 PRK13359 beta-ketoadipyl CoA t 98.8 2.3E-08 4.9E-13 99.5 11.5 97 50-150 23-121 (400)
106 TIGR02446 FadI fatty oxidation 98.8 1.5E-08 3.3E-13 101.7 10.2 97 50-150 28-124 (430)
107 PRK14691 3-oxoacyl-(acyl carri 98.8 5.5E-08 1.2E-12 94.9 13.5 171 53-252 4-237 (342)
108 PTZ00455 3-ketoacyl-CoA thiola 98.8 3.3E-08 7.2E-13 99.5 11.8 96 50-149 45-150 (438)
109 TIGR02430 pcaF beta-ketoadipyl 98.8 2.8E-08 6E-13 98.9 10.8 97 50-150 22-120 (400)
110 PRK06365 acetyl-CoA acetyltran 98.8 3.3E-08 7.2E-13 99.3 11.2 94 50-148 34-128 (430)
111 PRK06504 acetyl-CoA acetyltran 98.8 4.8E-08 1.1E-12 96.9 11.3 97 50-150 23-120 (390)
112 PRK06519 3-oxoacyl-(acyl carri 98.8 2.3E-07 5E-12 92.3 15.6 161 53-250 73-308 (398)
113 PRK08947 fadA 3-ketoacyl-CoA t 98.7 5.4E-08 1.2E-12 96.6 10.5 96 50-149 24-121 (387)
114 PRK07910 3-oxoacyl-(acyl carri 98.7 3.6E-07 7.8E-12 91.6 15.1 170 54-252 84-317 (418)
115 TIGR02445 fadA fatty oxidation 98.7 7.9E-08 1.7E-12 95.3 9.3 97 50-150 22-120 (385)
116 PRK09268 acetyl-CoA acetyltran 98.7 1.6E-07 3.4E-12 94.4 11.3 97 50-150 28-124 (427)
117 PRK08142 acetyl-CoA acetyltran 98.6 1.7E-07 3.6E-12 93.0 10.7 91 49-148 21-111 (388)
118 PRK07801 acetyl-CoA acetyltran 98.6 1.6E-07 3.4E-12 93.1 10.5 95 51-149 24-119 (382)
119 PF00109 ketoacyl-synt: Beta-k 98.6 2.5E-07 5.5E-12 85.8 11.1 113 53-171 87-250 (254)
120 PRK07855 lipid-transfer protei 98.5 5.4E-07 1.2E-11 89.4 10.6 89 49-146 20-108 (386)
121 PRK06025 acetyl-CoA acetyltran 98.5 8.8E-07 1.9E-11 88.3 11.6 97 50-150 26-123 (417)
122 COG0304 FabB 3-oxoacyl-(acyl-c 98.5 2.6E-06 5.7E-11 84.8 14.5 172 52-251 70-306 (412)
123 PRK08257 acetyl-CoA acetyltran 98.5 1.3E-06 2.8E-11 89.4 11.7 92 52-149 26-119 (498)
124 PRK06066 acetyl-CoA acetyltran 98.4 1.2E-06 2.7E-11 86.7 10.9 92 49-148 21-114 (385)
125 TIGR02813 omega_3_PfaA polyket 98.3 1.4E-05 3.1E-10 94.6 15.9 131 92-250 185-344 (2582)
126 PF07451 SpoVAD: Stage V sporu 98.3 7.3E-05 1.6E-09 70.6 17.3 180 53-263 51-248 (329)
127 COG3321 Polyketide synthase mo 98.1 0.00011 2.3E-09 81.7 17.6 166 56-252 94-314 (1061)
128 PRK07937 lipid-transfer protei 98.1 2.3E-05 5E-10 76.8 10.4 89 51-148 21-112 (352)
129 COG0183 PaaJ Acetyl-CoA acetyl 97.8 6.7E-05 1.4E-09 74.7 9.1 95 52-150 26-123 (392)
130 KOG1394 3-oxoacyl-(acyl-carrie 97.6 0.00027 5.8E-09 68.0 9.2 219 3-252 24-332 (440)
131 KOG1406 Peroxisomal 3-ketoacyl 97.6 0.0001 2.3E-09 68.1 5.9 106 36-149 10-117 (408)
132 KOG1390 Acetyl-CoA acetyltrans 97.2 0.0013 2.9E-08 62.4 8.2 96 50-149 27-122 (396)
133 KOG1391 Acetyl-CoA acetyltrans 96.0 0.016 3.5E-07 53.8 6.2 97 49-150 24-122 (396)
134 PRK06025 acetyl-CoA acetyltran 95.2 0.019 4.1E-07 57.6 4.0 73 219-343 319-394 (417)
135 PF13723 Ketoacyl-synt_2: Beta 95.2 0.27 5.9E-06 45.0 11.2 115 52-173 33-171 (218)
136 PF08541 ACP_syn_III_C: 3-Oxoa 95.2 0.037 8E-07 42.9 4.8 73 65-147 1-78 (90)
137 KOG1392 Acetyl-CoA acetyltrans 95.1 0.018 3.8E-07 54.2 3.0 90 51-145 64-153 (465)
138 KOG1389 3-oxoacyl CoA thiolase 95.0 0.064 1.4E-06 51.1 6.5 95 50-149 58-153 (435)
139 TIGR00748 HMG_CoA_syn_Arc hydr 93.1 0.29 6.2E-06 47.9 7.2 82 53-145 206-293 (345)
140 PRK06816 3-oxoacyl-(acyl carri 92.3 0.6 1.3E-05 46.2 8.4 86 55-150 272-367 (378)
141 PRK06147 3-oxoacyl-(acyl carri 91.8 0.48 1E-05 46.4 7.0 91 56-148 235-331 (348)
142 PRK07850 acetyl-CoA acetyltran 91.0 1.9 4.1E-05 42.9 10.4 75 18-102 252-327 (387)
143 PRK09052 acetyl-CoA acetyltran 89.7 2.2 4.8E-05 42.6 9.7 74 56-134 298-376 (399)
144 PRK09258 3-oxoacyl-(acyl carri 89.5 0.97 2.1E-05 43.7 6.7 83 55-147 239-326 (338)
145 CHL00203 fabH 3-oxoacyl-acyl-c 89.4 1.3 2.8E-05 42.7 7.5 80 57-146 228-312 (326)
146 TIGR01930 AcCoA-C-Actrans acet 89.3 2 4.3E-05 42.7 8.9 41 57-102 288-328 (386)
147 PRK13359 beta-ketoadipyl CoA t 89.3 2 4.3E-05 43.0 8.9 41 57-102 298-338 (400)
148 PRK07204 3-oxoacyl-(acyl carri 89.2 1.5 3.3E-05 42.1 7.9 80 56-145 231-315 (329)
149 PLN02326 3-oxoacyl-[acyl-carri 89.2 0.96 2.1E-05 44.8 6.6 79 57-145 282-365 (379)
150 PRK08242 acetyl-CoA acetyltran 89.1 2.1 4.4E-05 42.9 8.9 114 18-144 267-386 (402)
151 PRK12879 3-oxoacyl-(acyl carri 89.0 1.5 3.3E-05 41.9 7.7 80 57-146 227-311 (325)
152 TIGR00747 fabH 3-oxoacyl-(acyl 88.8 1.2 2.7E-05 42.5 6.8 82 55-146 219-305 (318)
153 PF02803 Thiolase_C: Thiolase, 88.6 3.8 8.2E-05 34.1 8.7 78 57-144 24-108 (123)
154 PRK06840 hypothetical protein; 88.0 2.2 4.9E-05 41.2 8.2 81 56-146 238-322 (339)
155 PRK06366 acetyl-CoA acetyltran 87.8 2.2 4.9E-05 42.4 8.2 114 18-144 252-371 (388)
156 PRK05963 3-oxoacyl-(acyl carri 87.8 1.3 2.8E-05 42.6 6.3 83 54-146 226-313 (326)
157 PRK07661 acetyl-CoA acetyltran 87.3 1.9 4.1E-05 42.9 7.3 81 56-144 290-375 (391)
158 cd00825 decarbox_cond_enzymes 87.0 3.6 7.8E-05 39.2 8.9 77 55-134 205-286 (332)
159 cd00751 thiolase Thiolase are 87.0 3.6 7.7E-05 40.8 9.1 42 56-102 286-327 (386)
160 PF02801 Ketoacyl-synt_C: Beta 87.0 2.2 4.7E-05 34.8 6.3 39 216-261 26-64 (119)
161 PRK08257 acetyl-CoA acetyltran 86.7 3.2 7E-05 42.7 8.8 120 18-145 250-382 (498)
162 PRK07515 3-oxoacyl-(acyl carri 86.5 2.1 4.5E-05 42.1 7.1 82 55-145 271-357 (372)
163 PRK05656 acetyl-CoA acetyltran 86.3 1.5 3.2E-05 43.8 5.9 40 218-263 294-333 (393)
164 PRK04262 hypothetical protein; 85.7 1.7 3.7E-05 42.3 6.0 81 54-145 208-294 (347)
165 cd00830 KAS_III Ketoacyl-acyl 84.6 3.3 7.1E-05 39.4 7.3 82 55-146 223-309 (320)
166 PRK06205 acetyl-CoA acetyltran 84.4 3.6 7.8E-05 41.1 7.7 76 18-102 265-340 (404)
167 PRK07937 lipid-transfer protei 84.1 6 0.00013 38.9 8.9 76 18-103 212-290 (352)
168 PRK09051 beta-ketothiolase; Pr 83.5 3.1 6.8E-05 41.5 6.8 41 57-102 294-334 (394)
169 PRK09050 beta-ketoadipyl CoA t 83.0 4.6 0.0001 40.4 7.8 41 57-102 299-339 (401)
170 PRK12578 acetyl-CoA acetyltran 82.9 3.5 7.6E-05 40.8 6.9 41 217-263 259-299 (385)
171 PRK07516 acetyl-CoA acetyltran 82.1 4.4 9.5E-05 40.2 7.2 43 55-102 260-302 (389)
172 PF02801 Ketoacyl-synt_C: Beta 81.8 1.6 3.4E-05 35.7 3.3 77 57-134 27-110 (119)
173 cd00327 cond_enzymes Condensin 81.5 6.9 0.00015 35.6 7.9 30 53-82 143-172 (254)
174 PRK09352 3-oxoacyl-(acyl carri 81.0 6 0.00013 37.7 7.5 81 56-146 220-305 (319)
175 PRK06504 acetyl-CoA acetyltran 80.8 5 0.00011 40.0 7.1 45 53-102 286-330 (390)
176 PLN02287 3-ketoacyl-CoA thiola 80.8 3.2 6.9E-05 42.3 5.7 40 218-263 334-373 (452)
177 TIGR02430 pcaF beta-ketoadipyl 80.6 5.9 0.00013 39.7 7.5 41 57-102 298-338 (400)
178 PTZ00455 3-ketoacyl-CoA thiola 79.9 3.3 7.1E-05 42.0 5.5 79 18-102 266-351 (438)
179 PRK08142 acetyl-CoA acetyltran 79.5 2.8 6E-05 41.8 4.8 78 18-102 218-297 (388)
180 PRK07851 acetyl-CoA acetyltran 79.5 3.7 8.1E-05 41.1 5.7 41 57-102 305-345 (406)
181 KOG1202 Animal-type fatty acid 78.4 6.3 0.00014 44.4 7.1 168 53-252 87-307 (2376)
182 PF02803 Thiolase_C: Thiolase, 78.3 6.2 0.00013 32.8 5.7 40 218-263 25-64 (123)
183 PRK06289 acetyl-CoA acetyltran 78.0 3.3 7.2E-05 41.3 4.9 42 56-102 277-318 (403)
184 PRK06690 acetyl-CoA acetyltran 77.4 13 0.00028 36.7 8.7 70 56-134 259-337 (361)
185 PRK06158 thiolase; Provisional 76.3 4.1 8.9E-05 40.4 4.9 43 55-102 254-296 (384)
186 PRK07855 lipid-transfer protei 75.8 4.4 9.5E-05 40.3 5.0 42 56-102 267-308 (386)
187 COG0332 FabH 3-oxoacyl-[acyl-c 75.5 3.4 7.3E-05 40.2 3.9 84 52-145 220-308 (323)
188 PRK06064 acetyl-CoA acetyltran 74.6 9.6 0.00021 37.7 7.1 42 56-102 259-300 (389)
189 PRK14691 3-oxoacyl-(acyl carri 74.5 9.9 0.00022 37.2 7.0 78 54-135 205-289 (342)
190 cd00826 nondecarbox_cond_enzym 72.9 12 0.00026 37.2 7.3 42 56-102 270-311 (393)
191 PRK08313 acetyl-CoA acetyltran 72.6 6.6 0.00014 39.0 5.3 79 18-102 216-299 (386)
192 TIGR02445 fadA fatty oxidation 72.3 21 0.00046 35.4 8.9 41 57-102 282-322 (385)
193 PRK07910 3-oxoacyl-(acyl carri 72.1 15 0.00033 36.8 7.9 46 56-102 287-333 (418)
194 KOG1394 3-oxoacyl-(acyl-carrie 72.0 3.2 7E-05 40.6 2.8 58 43-102 290-348 (440)
195 PRK06066 acetyl-CoA acetyltran 71.4 6.5 0.00014 39.2 4.9 79 18-102 218-300 (385)
196 PRK12880 3-oxoacyl-(acyl carri 70.9 9.5 0.00021 37.4 6.0 77 56-145 243-324 (353)
197 PRK08947 fadA 3-ketoacyl-CoA t 69.7 23 0.00051 35.1 8.5 41 57-102 284-324 (387)
198 PRK06065 acetyl-CoA acetyltran 69.6 9.3 0.0002 38.1 5.7 79 18-102 224-306 (392)
199 cd00831 CHS_like Chalcone and 69.4 11 0.00024 36.7 6.1 80 56-145 260-349 (361)
200 PRK06157 acetyl-CoA acetyltran 67.8 20 0.00043 35.7 7.6 79 18-102 224-310 (398)
201 cd00829 SCP-x_thiolase Thiolas 67.2 9.4 0.0002 37.4 5.1 44 54-102 250-293 (375)
202 PRK09268 acetyl-CoA acetyltran 66.8 4.2 9E-05 41.1 2.5 64 18-82 272-336 (427)
203 cd00834 KAS_I_II Beta-ketoacyl 65.5 16 0.00035 35.9 6.4 80 55-136 275-360 (406)
204 cd00832 CLF Chain-length facto 65.0 19 0.00042 35.8 6.9 78 54-135 269-352 (399)
205 cd00828 elong_cond_enzymes "el 64.6 20 0.00043 35.4 6.9 79 55-135 274-358 (407)
206 cd00827 init_cond_enzymes "ini 63.5 19 0.0004 34.2 6.3 87 52-147 220-314 (324)
207 PLN02787 3-oxoacyl-[acyl-carri 63.5 20 0.00042 37.5 6.8 75 57-135 407-488 (540)
208 COG0304 FabB 3-oxoacyl-(acyl-c 62.7 28 0.0006 35.1 7.4 46 56-102 277-323 (412)
209 PRK08963 fadI 3-ketoacyl-CoA t 62.5 6.7 0.00014 39.6 3.1 28 55-82 309-336 (428)
210 PRK09185 3-oxoacyl-(acyl carri 62.3 21 0.00046 35.4 6.6 77 57-136 262-342 (392)
211 PRK06501 3-oxoacyl-(acyl carri 60.7 25 0.00054 35.3 6.9 78 57-136 291-374 (425)
212 TIGR03150 fabF beta-ketoacyl-a 60.3 16 0.00035 36.0 5.3 45 57-102 277-322 (407)
213 PRK06633 acetyl-CoA acetyltran 60.1 7.9 0.00017 38.6 3.1 74 56-134 291-369 (392)
214 COG3425 PksG 3-hydroxy-3-methy 60.1 14 0.0003 36.6 4.7 87 51-145 205-296 (377)
215 PRK08722 3-oxoacyl-(acyl carri 59.9 33 0.0007 34.4 7.5 80 56-136 279-364 (414)
216 PRK09604 UGMP family protein; 59.1 31 0.00067 33.5 7.0 30 54-83 52-81 (332)
217 PRK06519 3-oxoacyl-(acyl carri 58.7 32 0.00069 34.4 7.1 45 56-102 281-326 (398)
218 PRK07314 3-oxoacyl-(acyl carri 58.6 19 0.0004 35.8 5.5 78 57-136 278-361 (411)
219 PRK08131 acetyl-CoA acetyltran 56.9 8.4 0.00018 38.5 2.7 42 56-102 297-338 (401)
220 PRK06333 3-oxoacyl-(acyl carri 56.8 27 0.00058 34.9 6.3 77 55-135 288-371 (424)
221 PRK08256 lipid-transfer protei 56.1 26 0.00057 34.7 6.0 42 217-264 266-307 (391)
222 KOG1390 Acetyl-CoA acetyltrans 55.8 13 0.00029 35.9 3.6 39 219-263 298-336 (396)
223 PRK05952 3-oxoacyl-(acyl carri 54.6 33 0.00071 34.1 6.4 46 55-101 254-300 (381)
224 PTZ00050 3-oxoacyl-acyl carrie 54.1 43 0.00094 33.5 7.3 47 55-102 283-331 (421)
225 PRK12404 stage V sporulation p 53.2 37 0.0008 33.1 6.2 76 216-352 57-135 (334)
226 PRK08170 acetyl-CoA acetyltran 52.8 15 0.00032 37.0 3.7 25 57-81 309-333 (426)
227 TIGR01835 HMG-CoA-S_prok 3-hyd 52.2 28 0.00061 34.4 5.5 96 55-170 205-314 (379)
228 smart00825 PKS_KS Beta-ketoacy 51.6 64 0.0014 32.0 8.0 48 54-102 278-326 (424)
229 cd00833 PKS polyketide synthas 51.5 54 0.0012 32.3 7.5 82 54-136 278-367 (421)
230 PRK06954 acetyl-CoA acetyltran 51.3 23 0.00051 35.2 4.8 40 218-263 298-337 (397)
231 KOG1389 3-oxoacyl CoA thiolase 51.2 28 0.00062 33.7 5.0 38 220-263 325-362 (435)
232 TIGR02446 FadI fatty oxidation 51.0 13 0.00028 37.6 2.9 24 58-81 314-337 (430)
233 PRK06445 acetyl-CoA acetyltran 49.9 27 0.00059 34.7 5.0 41 217-263 294-334 (394)
234 PRK09116 3-oxoacyl-(acyl carri 49.4 48 0.001 33.1 6.7 46 56-102 276-322 (405)
235 PRK07801 acetyl-CoA acetyltran 49.2 32 0.0007 34.0 5.4 39 219-263 284-322 (382)
236 PRK05790 putative acyltransfer 48.5 29 0.00064 34.4 5.0 40 218-263 294-333 (393)
237 PRK07103 polyketide beta-ketoa 47.7 13 0.00028 37.2 2.3 28 58-85 284-312 (410)
238 COG1214 Inactive homolog of me 45.9 60 0.0013 29.6 6.2 63 50-114 34-96 (220)
239 PRK08235 acetyl-CoA acetyltran 45.9 33 0.00073 34.1 4.9 40 218-263 294-333 (393)
240 PRK06365 acetyl-CoA acetyltran 45.4 63 0.0014 32.6 6.9 43 55-102 293-337 (430)
241 PLN03169 chalcone synthase fam 45.1 44 0.00094 33.3 5.6 79 59-145 285-374 (391)
242 PRK14878 UGMP family protein; 44.4 57 0.0012 31.6 6.2 26 58-83 49-74 (323)
243 PRK07108 acetyl-CoA acetyltran 44.1 26 0.00056 34.9 3.8 40 218-263 293-332 (392)
244 PLN02836 3-oxoacyl-[acyl-carri 42.5 31 0.00068 34.8 4.2 46 55-101 299-345 (437)
245 TIGR03722 arch_KAE1 universal 42.2 51 0.0011 31.8 5.4 26 58-83 50-75 (322)
246 TIGR00329 gcp_kae1 metallohydr 41.1 35 0.00076 32.7 4.1 30 54-83 49-78 (305)
247 PLN02644 acetyl-CoA C-acetyltr 40.3 46 0.001 33.1 4.9 39 219-263 295-333 (394)
248 KOG1406 Peroxisomal 3-ketoacyl 38.7 31 0.00068 32.6 3.1 44 54-102 271-314 (408)
249 KOG2708 Predicted metalloprote 38.5 42 0.00091 31.2 3.9 46 56-102 52-98 (336)
250 TIGR03725 bact_YeaZ universal 37.7 41 0.00088 30.1 3.8 33 51-83 31-63 (202)
251 KOG1391 Acetyl-CoA acetyltrans 34.5 52 0.0011 31.1 3.9 39 219-263 297-335 (396)
252 cd05125 Mth938_2P1-like Mth938 33.4 69 0.0015 26.2 4.1 60 52-120 36-96 (114)
253 PF04430 DUF498: Protein of un 33.3 29 0.00064 27.9 1.9 56 56-120 39-95 (110)
254 PF00814 Peptidase_M22: Glycop 33.1 35 0.00075 32.1 2.6 29 55-83 31-59 (268)
255 PF00195 Chal_sti_synt_N: Chal 32.0 1.1E+02 0.0023 28.3 5.5 41 218-264 105-149 (226)
256 COG4126 Hydantoin racemase [Am 31.9 3.5E+02 0.0076 24.9 8.7 104 10-134 114-218 (230)
257 TIGR01991 HscA Fe-S protein as 31.2 2.2E+02 0.0047 30.1 8.5 45 56-102 294-338 (599)
258 cd01458 vWA_ku Ku70/Ku80 N-ter 30.9 3.5E+02 0.0075 24.1 8.8 82 51-133 23-121 (218)
259 TIGR02177 PorB_KorB 2-oxoacid: 29.8 2.2E+02 0.0049 27.1 7.5 20 56-75 11-30 (287)
260 COG0533 QRI7 Metal-dependent p 29.6 67 0.0015 31.5 3.9 83 56-148 53-137 (342)
261 PRK05183 hscA chaperone protei 29.5 2.2E+02 0.0048 30.2 8.2 44 57-102 311-354 (616)
262 PRK09585 anmK anhydro-N-acetyl 29.1 1.2E+02 0.0025 30.1 5.6 50 53-102 69-125 (365)
263 cd05560 Xcc1710_like Xcc1710_l 28.7 75 0.0016 25.6 3.5 58 53-121 37-95 (109)
264 PF14574 DUF4445: Domain of un 28.6 85 0.0018 31.6 4.6 43 215-263 308-351 (412)
265 cd00248 Mth938-like Mth938-lik 28.5 63 0.0014 26.0 3.1 59 52-120 35-94 (109)
266 PRK06059 lipid-transfer protei 27.8 73 0.0016 31.6 4.0 40 218-263 276-315 (399)
267 TIGR03723 bact_gcp putative gl 27.7 79 0.0017 30.5 4.1 30 54-83 50-79 (314)
268 PF07451 SpoVAD: Stage V sporu 26.6 75 0.0016 30.7 3.6 32 321-352 100-132 (329)
269 cd01453 vWA_transcription_fact 26.2 2.9E+02 0.0062 24.1 7.2 89 52-148 24-117 (183)
270 PRK12342 hypothetical protein; 25.5 2.1E+02 0.0045 26.8 6.3 28 75-102 110-137 (254)
271 COG2377 Predicted molecular ch 25.4 76 0.0017 31.4 3.5 68 52-119 70-146 (371)
272 PTZ00340 O-sialoglycoprotein e 25.3 73 0.0016 31.3 3.4 28 56-83 52-79 (345)
273 cd01452 VWA_26S_proteasome_sub 24.8 1.8E+02 0.004 25.8 5.6 86 54-148 26-118 (187)
274 PF00108 Thiolase_N: Thiolase, 24.7 1.1E+02 0.0025 28.5 4.5 32 213-250 26-57 (264)
275 PTZ00186 heat shock 70 kDa pre 24.7 1.2E+02 0.0025 32.6 5.1 45 56-102 335-379 (657)
276 COG3737 Uncharacterized conser 24.2 1.5E+02 0.0034 24.5 4.5 63 52-124 51-115 (127)
277 PRK11867 2-oxoglutarate ferred 23.9 2E+02 0.0043 27.4 6.0 20 56-75 27-46 (286)
278 COG3894 Uncharacterized metal- 23.9 68 0.0015 33.1 2.9 42 216-263 475-517 (614)
279 cd05569 PTS_IIB_fructose PTS_I 23.4 1.5E+02 0.0033 23.1 4.4 38 48-85 8-64 (96)
280 TIGR01796 CM_mono_aroH monofun 23.4 1.6E+02 0.0036 24.2 4.5 47 61-114 26-75 (117)
281 PLN03172 chalcone synthase fam 22.6 1.5E+02 0.0033 29.5 5.1 41 217-263 106-150 (393)
282 PLN02377 3-ketoacyl-CoA syntha 22.5 1.3E+02 0.0027 31.3 4.6 42 217-264 176-221 (502)
283 PF14804 Jag_N: Jag N-terminus 21.7 83 0.0018 21.9 2.2 32 217-254 7-38 (52)
284 PF07736 CM_1: Chorismate muta 21.6 1.8E+02 0.004 24.0 4.5 47 61-114 26-75 (118)
285 cd01714 ETF_beta The electron 20.9 5.7E+02 0.012 22.7 8.2 28 75-102 109-136 (202)
286 PF13344 Hydrolase_6: Haloacid 20.5 2.2E+02 0.0047 22.3 4.7 73 56-148 18-90 (101)
287 PLN02854 3-ketoacyl-CoA syntha 20.5 4.7E+02 0.01 27.3 8.3 81 57-145 387-479 (521)
288 PRK13411 molecular chaperone D 20.5 1.4E+02 0.0031 31.8 4.8 45 56-102 309-353 (653)
289 TIGR02813 omega_3_PfaA polyket 20.3 2.3E+02 0.0049 35.6 6.8 78 58-136 318-403 (2582)
290 PRK03359 putative electron tra 20.1 3.1E+02 0.0067 25.7 6.3 29 74-102 112-140 (256)
No 1
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=100.00 E-value=6.8e-62 Score=484.36 Aligned_cols=341 Identities=86% Similarity=1.344 Sum_probs=297.4
Q ss_pred CCceeEEeEEEEecCCccccHHHHHHhhCCCcchhhhcccceeEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCccEEEE
Q 018515 1 MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEV 80 (354)
Q Consensus 1 ~~~~v~I~~ig~ylP~~~v~~~el~~~~g~~~~~i~~~~Gi~~r~~~~~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~ 80 (354)
|.++++|.++|.|+|+++|+|++|++.+|.+++|+..++|.+++.++.++|++++||++||++||+++|++|++||+||+
T Consensus 1 ~~~~vgI~gig~Y~P~~~v~n~eLa~~~g~~~~~~~~GI~~r~~ava~~~Ed~~tmA~~AA~~aL~~agid~~~Idlliv 80 (459)
T PLN02577 1 MPKNVGILAMEVYFPPTCVQQEALEAHDGVSKGKYTIGLGQDCMAFCTDVEDVISMSLTVVKSLLEKYNIDPKQIGRLEV 80 (459)
T ss_pred CCCccEEEEEEEeCCCeEEcHHHHHHHhCCCHHHHhhccceeEeccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 46789999999999999999999999999999998655555555567789999999999999999999999999999999
Q ss_pred eeccCCCCCCcHHHHHH---HHhcCCCCCCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeecccccCCCCCC
Q 018515 81 GSETVIDKSKSIKTFLM---QIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPAR 157 (354)
Q Consensus 81 aT~t~~~~~p~~a~~v~---~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~~~~~~~~~ 157 (354)
+|+|+++..|++|++|+ ++||. ++|.+||++++|+||++||++|.+||++|.+++++||||++|+++|..+..+
T Consensus 81 aTeT~~d~~ps~A~~v~~ll~~LG~---~~~~afDi~~AC~G~~~AL~~A~~~i~sg~~~~~~aLVV~aD~a~~~~~~~e 157 (459)
T PLN02577 81 GSETVIDKSKSIKTFLMQLFEESGN---TDIEGVDSTNACYGGTAALLNCVNWVESSSWDGRYGLVVAADSAVYAEGPAR 157 (459)
T ss_pred EcCCCCCCCCchHHHHHHHHHHhCC---CCcEEeehhhhhHHHHHHHHHHHHHHHcCCCCCCeEEEEEechhhccCCCCC
Confidence 99999999999999986 57777 6899999999999999999999999999964569999999999887766568
Q ss_pred CcccceeEEEEeccCCCceeeeccccccccccccccccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHhhchhCCCCC
Q 018515 158 PTGGAAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFS 237 (354)
Q Consensus 158 ~~~GDGAaA~ll~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~dg~~~~~~~~~~~~~~i~~~l~~~g~~~~~~l~ 237 (354)
.++||||+|+||++++++.++....|.++...+|||+|.++.+++.|||++++.+|++.+++++++++++.+...+.+++
T Consensus 158 ~t~GdGA~A~lv~~~~~~~l~~~~~g~~~~~~~Df~rP~~~~~~~~vdG~~s~~~yl~~~~~~~~~~~~k~~~~~~~g~~ 237 (459)
T PLN02577 158 PTGGAGAVAMLVGPNAPIVFESKYRGSHMAHVYDFYKPDLASEYPVVDGKLSQTCYLMALDSCYKRFCEKYEKLEGKQFS 237 (459)
T ss_pred CCCCcceEEEEEccCCCceeecccccccCcccchhcccCCCCCceEEcchHHHHHHHHHHHHHHHHHHHHhhcccccCCC
Confidence 89999999999998765445544557788888999999877778999999999999999999999999998532222388
Q ss_pred ccccceecccCCchHHHHHHHHHhhhhhhhhccccchhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhHHHhhcccc
Q 018515 238 LSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPS 317 (354)
Q Consensus 238 ~~Did~~v~HQan~~ii~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~ 317 (354)
.+|+||++||||+.+|+++.+++|+++++.+.+.-+++...+++.++..++..++|.|+++||.+.+..++.|.+|+.++
T Consensus 238 ~~d~d~~vfHqP~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps 317 (459)
T PLN02577 238 ISDADYFVFHAPYNKLVQKSFARLVYNDFQRNASSVDEDAKEKLAPFAGLSSDESYQNRDLEKVSQQVAKPLYDAKVQPT 317 (459)
T ss_pred HHHcCEEEecCCccchhHHHHHHHhhhhhhhccccccchhhhccccccccchhhccccchHHHHHHHhhHHHHHHhhccH
Confidence 99999999999999999999999987665543322234455566677788888999999999999999999999999999
Q ss_pred cccccccCccchHHHHHHHHHHhccCc
Q 018515 318 TLIPKQVGNMYTASLYAALASLIHNKH 344 (354)
Q Consensus 318 ~~~~~~~GN~~saSip~~L~~~l~~~~ 344 (354)
+.+.+++||+||||+|++|+++|++.+
T Consensus 318 ~~~~~~vGN~YTaSlyl~L~SlL~~~~ 344 (459)
T PLN02577 318 TLIPKQVGNMYTASLYAALASLVHNKH 344 (459)
T ss_pred hHHHHhcCcccchHHHHHHHHHHhhcc
Confidence 999999999999999999999998753
No 2
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=100.00 E-value=1.8e-61 Score=460.43 Aligned_cols=279 Identities=19% Similarity=0.200 Sum_probs=249.1
Q ss_pred ceeEEeEEEEecCCccccHHHHHHhhCCCcchhhhcccceeEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEee
Q 018515 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGS 82 (354)
Q Consensus 3 ~~v~I~~ig~ylP~~~v~~~el~~~~g~~~~~i~~~~Gi~~r~~~~~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT 82 (354)
++++|.|+|.|+|+++++|+++++..+++++||.+++||++||++.++|++++||++||++||+++|++|+|||+||++|
T Consensus 2 ~~a~i~g~G~~lP~~~vtn~d~e~~~~tsdewI~~rtGir~R~~a~~~e~~s~la~~Aa~~AL~~Agi~~~dIDlII~aT 81 (323)
T COG0332 2 MNAKILGIGSYLPERVVTNADLEKRVDTSDEWIETRTGIRERRIAADDETTSDLAVEAARKALEDAGISPDDIDLIIVAT 81 (323)
T ss_pred CcceEEEEEeecCCcccChHHHHhccCCCcceeeeecCCceeeecCCCccHHHHHHHHHHHHHHHcCCCHHHCCEEEEEc
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeecccc-cCC---CCCCC
Q 018515 83 ETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-YAE---GPARP 158 (354)
Q Consensus 83 ~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~~-~~~---~~~~~ 158 (354)
.||++..|++|+.||++||+ .++.+||++.+|+||+|||++|..+|++|.+ |+||||++|+++ +.+ +.+..
T Consensus 82 ~tpd~~~Ps~A~~vq~~LG~---~~~~afDl~aaCsgf~yaL~~A~~~i~sG~~--k~vLVVg~e~~S~~ld~~dR~t~v 156 (323)
T COG0332 82 STPDHLFPSTACLVQARLGL---GGAPAFDLQAACSGFLYALSVADGLIRSGGY--KNVLVVGAETLSRILDWTDRDTCV 156 (323)
T ss_pred CCcccCCChHHHHHHHHhCC---CCcceeechhhhHHHHHHHHHHHHHHHcCCC--CEEEEEehhHhhccCCHhhccceE
Confidence 99999999999999999999 5699999999999999999999999999966 999999999963 333 34678
Q ss_pred cccceeEEEEeccCC-C--c-eeeeccccccccccccccccCCC---------CCccccCCcchHHHHHHHHHHHHHHHH
Q 018515 159 TGGAAAVVMLVGPDA-P--V-AFESKLRGSHMSHAYDFYKPNLA---------SEYPVVDGKLSQTCYLMALDTCYKCLC 225 (354)
Q Consensus 159 ~~GDGAaA~ll~~~~-~--~-~~~~~~~g~~~~~~~~~~~p~~~---------~~~~~~dg~~~~~~~~~~~~~~i~~~l 225 (354)
+|||||+|+||++.+ . + ..+++++|++.+.+. .|... ..+..|+|+.++++.++.++++++++|
T Consensus 157 lFgDGAgAvvl~~~~~~~~i~~~~l~sdg~~~~~l~---~~~~~~~~~~~~~~~~~~~m~Gr~vfk~av~~~~~~~~~~L 233 (323)
T COG0332 157 LFGDGAGAVVLEATEDDNGILDTDLGSDGSQGDLLY---LPGGGSATPKEESGGGLLVMDGREVFKFAVRAMPKAIEEVL 233 (323)
T ss_pred EEcCCceEEEEecCCCCcCeeeeeeeccccCCCeee---ccCCCCccccccccccceeeccHHHHHHHHHHHHHHHHHHH
Confidence 999999999999874 2 3 467778888764332 22110 134578999999999999999999999
Q ss_pred HHhhchhCCCCCccccceecccCCchHHHHHHHHHhhhhhhhhccccchhHhhhccCCCCCCCCCccccchhHHHHHHhh
Q 018515 226 SKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQL 305 (354)
Q Consensus 226 ~~~g~~~~~~l~~~Did~~v~HQan~~ii~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (354)
++++ ++++|||||+|||+|.+|++.+.++|++ ++
T Consensus 234 ~~~~------l~~~dId~~vpHQan~ri~~~i~~~l~~------------------------~~---------------- 267 (323)
T COG0332 234 EKAG------LTPEDIDWFVPHQANLRIIEAIAKKLGI------------------------PE---------------- 267 (323)
T ss_pred HHcC------CCHHHCCEEccccccHHHHHHHHHHcCC------------------------CH----------------
Confidence 9999 9999999999999999999999999995 43
Q ss_pred hhhHHHhhcccccccccccCccchHHHHHHHHHHhccCc
Q 018515 306 AKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKH 344 (354)
Q Consensus 306 ~~~~~~~k~~~~~~~~~~~GN~~saSip~~L~~~l~~~~ 344 (354)
+|+..++ ++|||||+||||++|++++++++
T Consensus 268 ------~k~~~~~---~~yGNtsaAsiplaL~~~~~~g~ 297 (323)
T COG0332 268 ------EKVVVTV---DKYGNTSAASIPLALDEALREGR 297 (323)
T ss_pred ------HHHhhHH---HHhcccccchHHHHHHHHhhhCC
Confidence 8887765 89999999999999999988764
No 3
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=100.00 E-value=2.6e-58 Score=458.16 Aligned_cols=342 Identities=65% Similarity=1.071 Sum_probs=295.5
Q ss_pred eeEEeEEEEecCCccccHHHHHHhhCCCcchhhhcccceeEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeec
Q 018515 4 NVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSE 83 (354)
Q Consensus 4 ~v~I~~ig~ylP~~~v~~~el~~~~g~~~~~i~~~~Gi~~r~~~~~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~ 83 (354)
+|+|.++|+|+|+++|+|+++++..|.+++|+..++|.++++++.++|++.+||++||+++|++++++|++||+||++|+
T Consensus 1 ~vgI~~ig~y~P~~~v~~~eLa~~~g~~~~k~~~GI~~rr~av~~~~Ed~~tma~~AA~~lL~~a~id~~~Id~Liv~Te 80 (454)
T TIGR01833 1 DVGILALEIYFPSQYVDQAELEKYDGVSAGKYTIGLGQTKMGFCTDREDINSLCLTVVSKLMERYNIDYNQIGRLEVGTE 80 (454)
T ss_pred CcEEEEEEEeCCCeEEcHHHHHHhcCCCHHHheechhheecccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECC
Confidence 58999999999999999999999999999998655555555588899999999999999999999999999999999999
Q ss_pred cCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeecccccCCCCCCCcccce
Q 018515 84 TVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAA 163 (354)
Q Consensus 84 t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~~~~~~~~~~~~GDG 163 (354)
|+++..|++|++|++.||+-|.++|.+||++++|+||++||.+|.+||+++.+++++||||++|++.|.+.+.++++|||
T Consensus 81 S~~d~sps~a~~v~~lL~~lG~~~~~~fDi~~AC~G~t~AL~~A~~~i~s~~~~~~~aLVV~sDia~y~~~~~~~t~GaG 160 (454)
T TIGR01833 81 TIIDKSKSVKTVLMQLFEESGNTDVEGIDTTNACYGGTAALFNAINWIESSSWDGRYALVVAGDIAVYAKGNARPTGGAG 160 (454)
T ss_pred CCCCCCCchHHHHHHHHHhcCCCCceEEeccccchhHHHHHHHHHHHHHcCCcCCCeEEEEEeccccccCCCeeeccccc
Confidence 99999999999999976543337899999999999999999999999999854569999999999988877678899999
Q ss_pred eEEEEeccCCCceeeeccccccccccccccccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHhhchh-----CCCCCc
Q 018515 164 AVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLE-----GKQFSL 238 (354)
Q Consensus 164 AaA~ll~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~dg~~~~~~~~~~~~~~i~~~l~~~g~~~-----~~~l~~ 238 (354)
|+|+||++++++.++.+..+.++.+.+|||+|....++|.+||+++..+|++++.+++..+.++.+... ..+.++
T Consensus 161 AvAmLv~~~~~~~~~~~~~~~~~~~~~DF~rP~~~~~~p~vdg~~S~~~Yl~a~~~~y~~y~~~~~~a~~~~~~~~~~~~ 240 (454)
T TIGR01833 161 AVAMLIGPNAPIVFERGLRGSHMQHAYDFYKPDLASEYPVVDGKLSIQCYLSALDRCYKSYCKKIEKQWGKSGGDRKFTL 240 (454)
T ss_pred eEEEEeccCccceecCccceEEEeecccccCCCCCCcccccCCccCHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCH
Confidence 999999988765566544678888999999998656689999999999999999999888877654221 013778
Q ss_pred cccceecccCCchHHHHHHHHHhhhhhhhhccccchhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhHHHhhccccc
Q 018515 239 SNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPST 318 (354)
Q Consensus 239 ~Did~~v~HQan~~ii~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 318 (354)
+|+|+++||+|+.+|+++.++++.++++...+.-+.++.++.+.++.+++.++++.|+.++|.|.+..++.|.+|+.+++
T Consensus 241 ~dfd~~~fH~P~~km~~ka~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~ 320 (454)
T TIGR01833 241 NDFDYMVFHSPYCKLVQKSLARLLYNDFLRNPSSIDTALYEGLEALSTLKLEDTYFDRDLEKAFMKASKELFDKKTKPSL 320 (454)
T ss_pred hHcCEEeccCCcccHHHHHHHHHHHhhhhhccccccchhhcccchhhccccccccchhhHHHHHHhhhhhhHHHhhcchh
Confidence 99999999999999999999988766655433221223455566778889999999999999999999999999999999
Q ss_pred ccccccCccchHHHHHHHHHHhccCch
Q 018515 319 LIPKQVGNMYTASLYAALASLIHNKHS 345 (354)
Q Consensus 319 ~~~~~~GN~~saSip~~L~~~l~~~~~ 345 (354)
.+.+++|||||||++++|+++|++.++
T Consensus 321 ~~~~~vGN~YtaSlyl~L~Sll~~~~~ 347 (454)
T TIGR01833 321 LVPNQVGNMYTASLYGCLASLLSSKSA 347 (454)
T ss_pred HHHHhcCchhhhHHHHHHHHHHhhCCc
Confidence 999999999999999999999987654
No 4
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=100.00 E-value=2.9e-54 Score=412.71 Aligned_cols=290 Identities=35% Similarity=0.546 Sum_probs=271.2
Q ss_pred ceeEEeEEEEecCCccccHHHHHHhhCCCcchhhhcccceeEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEee
Q 018515 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGS 82 (354)
Q Consensus 3 ~~v~I~~ig~ylP~~~v~~~el~~~~g~~~~~i~~~~Gi~~r~~~~~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT 82 (354)
|+++|.++|.|+|..+|+.+|+++.+|.+++++.+++|+.+|.+++.+|++.+||++||+++|.++++||.+|++|+++|
T Consensus 1 ~~iGI~~~g~y~p~~~i~~~ela~~~g~d~~k~~~gl~~~e~sv~~~~ED~vTmaveAA~~~l~r~~~D~~~Ig~v~vgT 80 (377)
T COG3425 1 MMIGIVGIGAYIPRYRIKLEELARAWGVDPEKIKKGLGVEEKSVPPWDEDAVTMAVEAARNALKRADIDPSKIGAVIVGS 80 (377)
T ss_pred CccccceEEEeccceEeeHHHHHhhcCCChHHhhhccccccccCCCCchhHHHHHHHHHHHHHhccCCCHHHCceEEEec
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeecccccCCCC-CCCccc
Q 018515 83 ETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGP-ARPTGG 161 (354)
Q Consensus 83 ~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~~~~~~~-~~~~~G 161 (354)
+|+++..+++|.+|++.||+ .+++.++|+.++|.++..||+.|..|+.+|.. +++|||++|++.|.+.+ .++++|
T Consensus 81 ES~~d~~K~~at~v~~~lg~--~~~~~~~d~~~AC~agT~aL~~a~~~v~s~~~--~~~LvI~sD~a~~~~~~~~E~t~G 156 (377)
T COG3425 81 ESGPDAVKPTATIVAEALGL--NPSARAADVEFACYAGTAALQAAIGWVESGMI--SYGLVIGADTAQYAPGDALEYTAG 156 (377)
T ss_pred CCCcccccchHHHHHHHhCC--CCceehhhHHHHHHHHHHHHHHHHHHHHcCCc--cceEEEeehhhccCCCcccCccCC
Confidence 99999999999999999999 78999999999999999999999999999955 89999999999998874 589999
Q ss_pred ceeEEEEeccCCCceeeeccccccccccccccccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHhhchhCCCCCcccc
Q 018515 162 AAAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNA 241 (354)
Q Consensus 162 DGAaA~ll~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~dg~~~~~~~~~~~~~~i~~~l~~~g~~~~~~l~~~Di 241 (354)
+||+|+||++++++...+...++++.+.+|||+|.+. .+|.++|+|+...|++.+.+++++++++.+ ++++|+
T Consensus 157 AGavA~lIg~n~~~~a~~~~~~syt~d~~DFwRp~~~-~yp~~dg~~s~~~Y~~~~~~a~~~~~~k~g------ls~~df 229 (377)
T COG3425 157 AGAVAFLIGKNPPIVAEFEGTGSYTTDTPDFWRPDGQ-PYPYVDGRFSEPAYFKHVENAAKGYMEKTG------LSPDDF 229 (377)
T ss_pred CceEEEEEccCCCeEEEecCceEEecCCCcccccCCC-cccccCceecHHHHHHHHHHHHHHHHHHhC------CChhhh
Confidence 9999999999865555555678999999999999854 889999999988999999999999999999 999999
Q ss_pred ceecccCCchHHHHHHHHHhhhhhhhhccccchhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhHHHhhcccccccc
Q 018515 242 DYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIP 321 (354)
Q Consensus 242 d~~v~HQan~~ii~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 321 (354)
|++||||||.+|.+++++.+++ .+ +++.+++.+.
T Consensus 230 dy~vfH~P~~k~~~ka~k~l~~------------------------~~----------------------e~v~~~l~~~ 263 (377)
T COG3425 230 DYIVFHQPNGKFPKKAAKSLGF------------------------KE----------------------EQVKPGLVYP 263 (377)
T ss_pred CeEEecCCCCchHHHHHHHhCc------------------------cH----------------------hhcCccchhh
Confidence 9999999999999999999995 22 8899999999
Q ss_pred cccCccchHHHHHHHHHHhccCc-hhhhh
Q 018515 322 KQVGNMYTASLYAALASLIHNKH-SELVI 349 (354)
Q Consensus 322 ~~~GN~~saSip~~L~~~l~~~~-~~~~~ 349 (354)
+++||+||||+++.|+++|++.+ ++.-|
T Consensus 264 ~~vGN~YtgS~~L~Las~L~~a~~~G~rI 292 (377)
T COG3425 264 QRIGNTYTGSLLLGLASLLDNAKLPGDRI 292 (377)
T ss_pred hhcCcccchhHHHHHHHHHhhcCCCCCEE
Confidence 99999999999999999999987 54433
No 5
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=6.1e-52 Score=404.60 Aligned_cols=284 Identities=19% Similarity=0.172 Sum_probs=233.2
Q ss_pred CceeEEeEEEEecCCccccHHHHH-HhhCCC---cchhhhcccceeEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCccE
Q 018515 2 AKNVGILAMDIYFPPTCVQQEALE-AHDGAS---KGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGR 77 (354)
Q Consensus 2 ~~~v~I~~ig~ylP~~~v~~~el~-~~~g~~---~~~i~~~~Gi~~r~~~~~~e~~~~La~~Aa~~aL~~agi~~~dId~ 77 (354)
+++++|.|+|+|+|+++++|+++. +.++.. .+++.+++||++||++.++|++++||++|+++||+++|++++|||+
T Consensus 5 ~~~~~I~~~g~~lP~~~v~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~ 84 (353)
T PRK12880 5 FDKAKISGICVSVPEHKICIDDELESVFSNDIKTLKRMKKVIGLNTRYICDENTCVSDLGKHAANTLLQGLNIDKNSLDA 84 (353)
T ss_pred ccccEEEEEEEECCCeEecHHHHHHHhcCcchhhhhhhhhccCceEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCE
Confidence 367899999999999999999754 444322 2346678999999999999999999999999999999999999999
Q ss_pred EEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeecccccC----C
Q 018515 78 LEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYA----E 153 (354)
Q Consensus 78 lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~~~~----~ 153 (354)
||++|+||++..|++|.+|+++||+ ++++.+||+++||+||++||++|..++++| +.+ +|||++|.++.. +
T Consensus 85 lI~~t~t~d~~~P~~a~~v~~~Lg~--~~~~~~~di~~~C~g~~~aL~~A~~~i~~~--~~~-~LVv~~e~~S~~~~~~d 159 (353)
T PRK12880 85 LIVVTQSPDFFMPSTACYLHQLLNL--SSKTIAFDLGQACAGYLYGLFVAHSLIQSG--LGK-ILLICGDTLSKFIHPKN 159 (353)
T ss_pred EEEEcCCCCCCCCcHHHHHHHHhCC--CCCceEEehhhhhHHHHHHHHHHHHHHHcC--CCC-EEEEEehhhhccCCccc
Confidence 9999999999999999999999999 568999999999999999999999999999 448 999999986422 1
Q ss_pred CCCCCcccceeEEEEeccCCC--ceeeeccccccccccccccccCCC----------------------CCccccCCcch
Q 018515 154 GPARPTGGAAAVVMLVGPDAP--VAFESKLRGSHMSHAYDFYKPNLA----------------------SEYPVVDGKLS 209 (354)
Q Consensus 154 ~~~~~~~GDGAaA~ll~~~~~--~~~~~~~~g~~~~~~~~~~~p~~~----------------------~~~~~~dg~~~ 209 (354)
.....+|||||+|+||++++. ..+...++|++.+.. ..|.++ ..+..|+|+..
T Consensus 160 ~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~~~~~~~~~---~~p~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v 236 (353)
T PRK12880 160 MNLAPIFGDGVSATLIEKTDFNEAFFELGSDGKYFDKL---IIPKGAMRIPKADIFNDDSLMQTEEFRQLENLYMDGANI 236 (353)
T ss_pred CCceeeecccceEEEEEecCCCCceEEEEecCCCCCeE---EecCCCcCCCccccccccccccccccccCceEEEcCHHH
Confidence 224678999999999986432 123444556544322 111111 01224778888
Q ss_pred HHHHHHHHHHHHHHHHHHhhchhCCCCCccccceecccCCchHHHHHHHHHhhhhhhhhccccchhHhhhccCCCCCCCC
Q 018515 210 QTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSG 289 (354)
Q Consensus 210 ~~~~~~~~~~~i~~~l~~~g~~~~~~l~~~Did~~v~HQan~~ii~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (354)
++.+.+.+++.++++|+++| ++.+|||+|++||+|.+|++.+.++|++ ++
T Consensus 237 ~~~~~~~~~~~i~~~L~~~g------l~~~did~~v~HQ~~~~i~~~i~~~Lgl------------------------~~ 286 (353)
T PRK12880 237 FNMALECEPKSFKEILEFSK------VDEKDIAFHLFHQSNAYLVDCIKEELKL------------------------ND 286 (353)
T ss_pred HHHHHHHHHHHHHHHHHHcC------CCHHHCCEEEECCCCHHHHHHHHHHhCC------------------------CH
Confidence 88888999999999999999 9999999999999999999999999985 43
Q ss_pred CccccchhHHHHHHhhhhhHHHhhcccccccccccCccchHHHHHHHHHHhccCchhh
Q 018515 290 DESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKHSEL 347 (354)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~GN~~saSip~~L~~~l~~~~~~~ 347 (354)
+|++.. ++++||||+|||||++|.+.+++++.+.
T Consensus 287 ----------------------ek~~~~--~l~~~GNtssasip~~L~~~~~~~~~~~ 320 (353)
T PRK12880 287 ----------------------DKVPNF--IMEKYANLSACSLPALLCELDTPKEFKA 320 (353)
T ss_pred ----------------------HHhhhh--hHHhhCCHHHHHHHHHHHHHHHcCCcEE
Confidence 777432 3589999999999999999998777653
No 6
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=100.00 E-value=2.3e-50 Score=397.11 Aligned_cols=288 Identities=31% Similarity=0.475 Sum_probs=247.1
Q ss_pred eEEeEEEEecCCccccHHHHHHhhCCCcchhhhcccceeEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeecc
Q 018515 5 VGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSET 84 (354)
Q Consensus 5 v~I~~ig~ylP~~~v~~~el~~~~g~~~~~i~~~~Gi~~r~~~~~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t 84 (354)
|+|.++|+|+|+++++++++++..|.+++|+.+++|+++|+++.++|++.+||++|+++||+++ ++++||+||++|+|
T Consensus 1 iGI~~i~~y~P~~~v~~~ela~~~g~~~~~~~~g~G~~~~~~~~~~ed~~~la~~Aa~~aL~~a--~~~~Id~li~~t~s 78 (379)
T TIGR01835 1 IGIDKISFFTPQNYLDMTALAEARGVDPEKFHIGIGQKKMAVPPIDEDIVTMAASAAKPILDRN--DKQKIDMVIFGTES 78 (379)
T ss_pred CCEeEEEEECCCEEeeHHHHHHHhCCCHHHHHhhcCceEEeeCCCCCCHHHHHHHHHHHHHHhC--CHhhCCEEEEEeCC
Confidence 5899999999999999999999999999999999999999999999999999999999999998 89999999999999
Q ss_pred CCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeecccccCCCC-CCCcccce
Q 018515 85 VIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGP-ARPTGGAA 163 (354)
Q Consensus 85 ~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~~~~~~~-~~~~~GDG 163 (354)
+++..|+++.+|++.||+ ++++.+||++++|+|+++||.+|.+++++| +.++||||++|+++|.+.. .+.+||||
T Consensus 79 ~~~~~~s~a~~v~~~Lgl--~~~~~~~dv~~aC~gg~~aL~~A~~~i~s~--~~~~aLVv~~D~a~~~~~~~~~~~~GdG 154 (379)
T TIGR01835 79 GIDQSKAAAVYVHGLLGL--QPFCRSFELKQACYGATAALQMAKGHVALS--PDRKVLVIASDIAKYGLESPGEPTQGAG 154 (379)
T ss_pred CCCCCCCHHHHHHHHhCC--CCCceEEEeccccHHHHHHHHHHHHHHHcC--CCCeEEEEEeehhhcccCCCCCccccCc
Confidence 999889999999999999 567999999999999999999999999999 4599999999998877543 47899999
Q ss_pred eEEEEeccCCCc-eeeeccccccccccccccccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHhhchhCCCCCccccc
Q 018515 164 AVVMLVGPDAPV-AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNAD 242 (354)
Q Consensus 164 AaA~ll~~~~~~-~~~~~~~g~~~~~~~~~~~p~~~~~~~~~dg~~~~~~~~~~~~~~i~~~l~~~g~~~~~~l~~~Did 242 (354)
|+|+||++++++ .+... .+.++...+++|+|.+ ..++.++|++++..|++.+.+++++++++.+ ++++|||
T Consensus 155 A~A~Ll~~~~~i~~~~~~-~~~~t~~~~df~~p~~-~~~~~v~g~~s~~~y~~~~~~~~~~~l~~~g------~~~~did 226 (379)
T TIGR01835 155 AVAMLVSADPKLLAINED-SVLYTDDIMDFWRPNY-STTALVDGQYSNEQYLNAFENAWNDYAKRTG------LSLADFA 226 (379)
T ss_pred cEEEEEecCCCeeEEecc-ceeeecCCCCccCCCC-CCceeECcHHHHHHHHHHHHHHHHHHHHHhC------CCHHHcC
Confidence 999999987654 33322 2345556688999874 5568899999999999999999999999999 9999999
Q ss_pred eecccCCchHHHHHHHHHhhhhhhhhccccchhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhHHHhhccccccccc
Q 018515 243 YFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPK 322 (354)
Q Consensus 243 ~~v~HQan~~ii~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 322 (354)
+|++||||.+|+.+.++++. ..+ +++. .+.+.+.+.+++.+++
T Consensus 227 ~~i~H~p~~~~~~k~~~~~l-~~~-------------------~~~~-----------------~~~~~~~~~~s~~~~~ 269 (379)
T TIGR01835 227 AFCFHVPFTKMGLKALRHIL-KKN-------------------YEDE-----------------DESVQNAYLESIIYNR 269 (379)
T ss_pred EEEECCCCCcHHHHHHHHHH-hhc-------------------cccc-----------------HHHHHHHhhhhhhhhh
Confidence 99999999999888777754 110 0111 1112233344556678
Q ss_pred ccCccchHHHHHHHHHHhccC
Q 018515 323 QVGNMYTASLYAALASLIHNK 343 (354)
Q Consensus 323 ~~GN~~saSip~~L~~~l~~~ 343 (354)
+||||||||+|++|+++++++
T Consensus 270 ~~GN~~sas~~l~L~~~l~~~ 290 (379)
T TIGR01835 270 EVGNLYTGSLYLGLASLLENA 290 (379)
T ss_pred hcCchHhHHHHHHHHHHHHhc
Confidence 999999999999999999875
No 7
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=2.2e-49 Score=382.54 Aligned_cols=277 Identities=18% Similarity=0.164 Sum_probs=232.2
Q ss_pred ceeEEeEEEEecCCccccHHHHHHhhCCCcchhhhcccceeEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEee
Q 018515 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGS 82 (354)
Q Consensus 3 ~~v~I~~ig~ylP~~~v~~~el~~~~g~~~~~i~~~~Gi~~r~~~~~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT 82 (354)
.+++|.++|+|+|+++++|+++.+.++.+++|+.+++|+++|+++.++|++++||++||++||+++|++++|||+||++|
T Consensus 2 ~~~~I~~~g~~lP~~~v~~~~~~~~~~~~~~~i~~~~Gi~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~~Id~li~~t 81 (326)
T PRK05963 2 CSSRIAGFGHAVPDRRVENAEIEAQLGLETGWIERRTGIRCRRWAAPDETLSDLAASAGDMALSDAGIERSDIALTLLAT 81 (326)
T ss_pred CccEEEEEEEECCCCeecHHHHHHHcCCCHHHhhhccCCeEEEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEC
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeecccccC--C--CCCCC
Q 018515 83 ETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYA--E--GPARP 158 (354)
Q Consensus 83 ~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~~~~--~--~~~~~ 158 (354)
++|++..|+++++||++||+ +++.+||++++|+||++||++|.++++++ . ++||||++|..+.. . .....
T Consensus 82 ~~~d~~~p~~a~~v~~~Lg~---~~~~~~di~~~C~g~~~aL~~A~~~l~~~--~-~~aLVv~~d~~s~~~~~~~~~~~~ 155 (326)
T PRK05963 82 STPDHLLPPSAPLLAHRLGL---QNSGAIDLAGACAGFLYALVLADGFVRAQ--G-KPVLVVAANILSRRINMAERASAV 155 (326)
T ss_pred CCCCCCCCcHHHHHHHHhCC---CCCceeeccchhhHHHHHHHHHHHHHHcC--C-CeEEEEEechhhccCCccccCceE
Confidence 99998899999999999999 46889999999999999999999999987 3 89999999985421 1 12357
Q ss_pred cccceeEEEEeccCCC----c-eeeeccccccccccccccccCCCCC-------------ccccCCcchHHHHHHHHHHH
Q 018515 159 TGGAAAVVMLVGPDAP----V-AFESKLRGSHMSHAYDFYKPNLASE-------------YPVVDGKLSQTCYLMALDTC 220 (354)
Q Consensus 159 ~~GDGAaA~ll~~~~~----~-~~~~~~~g~~~~~~~~~~~p~~~~~-------------~~~~dg~~~~~~~~~~~~~~ 220 (354)
+|||||+|+||++++. + .....++|.+.+.. ..|.++.. +...+|+..++.+.+.+++.
T Consensus 156 lfGDgA~A~ll~~~~~~~~~~l~~~~~t~~~~~~~~---~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (326)
T PRK05963 156 LFADAAGAVVLAPSAKANSGVLGSQLISDGSHYDLI---KIPAGGSARPFAPERDASEFLMTMQDGRAVFTEAVRMMSGA 232 (326)
T ss_pred EEeecceEEEEEecCCCCCceEEEEEEEcCCCCCeE---EeCCCCcCCCCcccccccccceEecCCHHHHHHHHHHHHHH
Confidence 8999999999987541 2 23333444443211 11221111 11236666677778888999
Q ss_pred HHHHHHHhhchhCCCCCccccceecccCCchHHHHHHHHHhhhhhhhhccccchhHhhhccCCCCCCCCCccccchhHHH
Q 018515 221 YKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEK 300 (354)
Q Consensus 221 i~~~l~~~g~~~~~~l~~~Did~~v~HQan~~ii~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (354)
++++|++++ ++++|||+|+|||+|.++++.+.++|++ ++
T Consensus 233 ~~~~L~~~g------l~~~did~~~~h~~~~~~~~~~~~~l~l------------------------~~----------- 271 (326)
T PRK05963 233 SQNVLASAA------MTPQDIDRFFPHQANARIVDKVCETIGI------------------------PR----------- 271 (326)
T ss_pred HHHHHHHcC------CCHHHCCEEEeCCCCHHHHHHHHHHcCC------------------------CH-----------
Confidence 999999999 9999999999999999999999999985 43
Q ss_pred HHHhhhhhHHHhhcccccccccccCccchHHHHHHHHHHhccC
Q 018515 301 VSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNK 343 (354)
Q Consensus 301 ~~~~~~~~~~~~k~~~~~~~~~~~GN~~saSip~~L~~~l~~~ 343 (354)
+|+..++ ++||||+|||+|++|.++++++
T Consensus 272 -----------~k~~~~l---~~~Gn~~sas~~~~L~~~~~~~ 300 (326)
T PRK05963 272 -----------AKAASTL---ETYGNSSAATIPLSLSLANLEQ 300 (326)
T ss_pred -----------HHhhhhH---HhhCcHHHHHHHHHHHHHHHhC
Confidence 7776554 7999999999999999988764
No 8
>PRK04262 hypothetical protein; Provisional
Probab=100.00 E-value=1.5e-48 Score=380.21 Aligned_cols=283 Identities=27% Similarity=0.402 Sum_probs=231.2
Q ss_pred ceeEEeEEEEecCCccccHHHHHHhhCCCcchhhhcccceeEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEee
Q 018515 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGS 82 (354)
Q Consensus 3 ~~v~I~~ig~ylP~~~v~~~el~~~~g~~~~~i~~~~Gi~~r~~~~~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT 82 (354)
|+++|.++|+|+|+++++|+++++.++.+++|+.+++|+++|+++.++++..+|+++|+++||+++|++++|||+||++|
T Consensus 1 ~~v~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s 80 (347)
T PRK04262 1 MMVGIVGYGAYIPRYRIKVEEIARVWGDDPEAIKRGLGVEEKSVPGPDEDTATIAVEAARNALKRAGIDPKEIGAVYVGS 80 (347)
T ss_pred CceeEEEEEEeCCCEEecHHHHHHHhCcCHHHHhhccCeeeeecCCCCcCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeecccccCCCC-CCCccc
Q 018515 83 ETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGP-ARPTGG 161 (354)
Q Consensus 83 ~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~~~~~~~-~~~~~G 161 (354)
+|+++..|+++.+|+++||+ ++++.++|++++|+|+++||.+|..++++|. .++||||++|.+...+.+ ...+||
T Consensus 81 ~~~~~~~p~~a~~v~~~Lgl--~~~~~~~dv~~~C~~~~~aL~~A~~~i~sg~--~~~aLVv~~e~~~~~~~~~~~~~~G 156 (347)
T PRK04262 81 ESHPYAVKPTATIVAEALGA--TPDLTAADLEFACKAGTAALQAAMGLVKSGM--IKYALAIGADTAQGAPGDALEYTAA 156 (347)
T ss_pred cCCCcccccHHHHHHHHcCC--CCCceEEEHHHhHHHHHHHHHHHHHHHHcCC--CCEEEEEEEeeeccCCCCCCCCcCC
Confidence 99988889999999999999 5568899999999999999999999999995 499999999996443322 356789
Q ss_pred ceeEEEEeccCCCc-eeeeccccccccccccccccCCCCCccccCCcchH-HHHHHHHHHHHHHHHHHhhchhCCCCCcc
Q 018515 162 AAAVVMLVGPDAPV-AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQ-TCYLMALDTCYKCLCSKYEKLEGKQFSLS 239 (354)
Q Consensus 162 DGAaA~ll~~~~~~-~~~~~~~g~~~~~~~~~~~p~~~~~~~~~dg~~~~-~~~~~~~~~~i~~~l~~~g~~~~~~l~~~ 239 (354)
|||+|+||++++.. .+. .+. ++.....+++++. +..++.....+.. ..+++.++++++++|++++ ++++
T Consensus 157 DGA~A~ll~~~~~~~~i~-~~~-~~~~d~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g------l~~~ 227 (347)
T PRK04262 157 AGGAAFIIGKEEVIAEIE-ATY-SYTTDTPDFWRRE-GEPYPRHGGRFTGEPAYFKHIISAAKGLMEKLG------LKPS 227 (347)
T ss_pred CCcEEEEEecCcccceee-ccc-cccccchhhcCCC-CCcCCCcCceecchHHHHHHHHHHHHHHHHHhC------cCHH
Confidence 99999999875431 111 010 1111122334432 2222221122221 1466788999999999999 9999
Q ss_pred ccceecccCCchHHHHHHHHHhhhhhhhhccccchhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhHHHhhcccccc
Q 018515 240 NADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTL 319 (354)
Q Consensus 240 Did~~v~HQan~~ii~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 319 (354)
|||+|+|||+|.+|++.+.++|++ +. +|+..++
T Consensus 228 dId~~v~Hq~n~~~~~~~~~~Lgl------------------------~~----------------------ek~~~~~- 260 (347)
T PRK04262 228 DYDYAVFHQPNGKFPLRVAKMLGF------------------------TK----------------------EQVKPGL- 260 (347)
T ss_pred HhceeecCCCchHHHHHHHHHcCC------------------------CH----------------------HHhhccc-
Confidence 999999999999999999999985 43 7776654
Q ss_pred cccccCccchHHHHHHHHHHhccCch
Q 018515 320 IPKQVGNMYTASLYAALASLIHNKHS 345 (354)
Q Consensus 320 ~~~~~GN~~saSip~~L~~~l~~~~~ 345 (354)
++++||||+|||||++|++++++.++
T Consensus 261 ~~~~~GNt~sAsi~~~L~~~~~~~~~ 286 (347)
T PRK04262 261 LTPYIGNTYSGSALLGLAAVLDVAKP 286 (347)
T ss_pred hhhhhCChHHHHHHHHHHHHHHhCCC
Confidence 35899999999999999999875333
No 9
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=100.00 E-value=2.4e-48 Score=378.38 Aligned_cols=285 Identities=27% Similarity=0.401 Sum_probs=231.1
Q ss_pred eeEEeEEEEecCCccccHHHHHHhhCCCcchhhhcccceeEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeec
Q 018515 4 NVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSE 83 (354)
Q Consensus 4 ~v~I~~ig~ylP~~~v~~~el~~~~g~~~~~i~~~~Gi~~r~~~~~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~ 83 (354)
+++|.|+|+|+|+++++|+++++.++.+++|+.+++|+++|+++.+++++.+|+++|+++||+++|++++|||+||++|+
T Consensus 1 ~~~I~g~g~~lP~~~v~n~~l~~~~~~~~~~i~~~~Gi~~r~v~~~~~~~~~la~~Aa~~aL~~agl~~~dID~li~~s~ 80 (345)
T TIGR00748 1 MAGIVGYGAYIPMYRIKVEEIARVWGKDPESISNGLPVEEKAVPGLDEDTATIGVEAARNALKRAKIDPKDIGAVYVGSE 80 (345)
T ss_pred CccEEEEEEeCCCeeecHHHHHHHhCCCHhHeeeccceeeeecCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEec
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeecccccCCCC-CCCcccc
Q 018515 84 TVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGP-ARPTGGA 162 (354)
Q Consensus 84 t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~~~~~~~-~~~~~GD 162 (354)
++++..|+++..++++||+ ++++.+||++++|+||++||.+|..+|++|.+ ++||||++|..+..+.+ ..++|||
T Consensus 81 ~~~~~~p~~a~~v~~~LGl--~~~~~~~dv~~aC~g~~~al~~A~~~i~sg~~--~~vLVv~~d~~~~~~~~~~~~~~GD 156 (345)
T TIGR00748 81 SHPYAVKPTATIVAEAIGA--TPDLTAADLEFACKAGTAGIQACMGLVASGMI--KYGLAIGADTAQGAPGDALEYTAGA 156 (345)
T ss_pred CCCccccchHHHHHHHcCC--CCCceEEEHHHhHHHHHHHHHHHHHHHHcCCC--CEEEEEEEeecccCCCccCcccCCC
Confidence 9988889999999999999 55789999999999999999999999999955 99999999996543332 3578899
Q ss_pred eeEEEEeccCCCc-eeeeccccccccccccccccCCCCCccccCCcchH-HHHHHHHHHHHHHHHHHhhchhCCCCCccc
Q 018515 163 AAVVMLVGPDAPV-AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQ-TCYLMALDTCYKCLCSKYEKLEGKQFSLSN 240 (354)
Q Consensus 163 GAaA~ll~~~~~~-~~~~~~~g~~~~~~~~~~~p~~~~~~~~~dg~~~~-~~~~~~~~~~i~~~l~~~g~~~~~~l~~~D 240 (354)
||+|+||++.+.. .+. +... +.....++|++. +..++...+++.. ..+++...++++++|++++ ++++|
T Consensus 157 GAaA~vl~~~~~~~~~~-~~~~-~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g------l~~~d 227 (345)
T TIGR00748 157 GGAAYIIGEKNTVAYFE-GTYS-YTTDTPDFWRRE-GEPYPRHGGRFTGEPAYFHHVVTAAKGLMEKLG------LTPED 227 (345)
T ss_pred ceEEEEEccCCcceEee-cccc-eecccccccccC-CCcCCCcCCeecChHHHHHHHHHHHHHHHHHcC------CCHHH
Confidence 9999999976532 221 1111 111112334332 1222333333322 2355556688999999999 99999
Q ss_pred cceecccCCchHHHHHHHHHhhhhhhhhccccchhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhHHHhhccccccc
Q 018515 241 ADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLI 320 (354)
Q Consensus 241 id~~v~HQan~~ii~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 320 (354)
||+|++||+|.+|++.+.++|++ +. +|+..++.
T Consensus 228 id~~i~Hq~~~~~~~~~~~~lgl------------------------~~----------------------ek~~~~~~- 260 (345)
T TIGR00748 228 FDYAVFHQPNGKFYLVAARMLGF------------------------PK----------------------EQVKPGLL- 260 (345)
T ss_pred cCEEEeCCCChHHHHHHHHHcCC------------------------CH----------------------HHeecccc-
Confidence 99999999999999999999985 43 78776642
Q ss_pred ccccCccchHHHHHHHHHHhccCchhhh
Q 018515 321 PKQVGNMYTASLYAALASLIHNKHSELV 348 (354)
Q Consensus 321 ~~~~GN~~saSip~~L~~~l~~~~~~~~ 348 (354)
.++||||+|||||++|++++++.+++..
T Consensus 261 ~~~~GNt~sAsipl~L~~~~~~~~~Gd~ 288 (345)
T TIGR00748 261 TPRIGNTYSGATPVGLSAVLDIAEPGDR 288 (345)
T ss_pred ccccCchhhhHHHHHHHHHHHhcCCCCE
Confidence 3799999999999999999875444443
No 10
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=4.6e-47 Score=366.75 Aligned_cols=283 Identities=16% Similarity=0.138 Sum_probs=232.0
Q ss_pred CCceeEEeEEEEecCCccccHHHHHHhhCCCcchhhhcccceeEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCccEEEE
Q 018515 1 MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEV 80 (354)
Q Consensus 1 ~~~~v~I~~ig~ylP~~~v~~~el~~~~g~~~~~i~~~~Gi~~r~~~~~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~ 80 (354)
|+++++|.++|+|+|+++++|+++.+..+.+.+|+.+.+|+++|+++. +++..+|+.+|+++||+++|++|+|||+||+
T Consensus 1 ~~~~~~I~~~g~~lP~~~v~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~-~~~~~~la~~Aa~~aL~~ag~~~~dId~li~ 79 (329)
T PRK07204 1 MKRYISIKGIGTYLPKRKVDSLELDKKLDLPEGWVLKKSGVKTRHFVD-GETSSYMGAEAAKKAVEDAKLTLDDIDCIIC 79 (329)
T ss_pred CCCCcEEEEEEEeCCCceecHHHHHHhhCCCHhHhhhccCceEEeecC-CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 778899999999999999999999999999889999999999999997 8999999999999999999999999999999
Q ss_pred eeccCCCCCCcHHHHHHHHhcCCCCC-CeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeecccccC-C-C--C
Q 018515 81 GSETVIDKSKSIKTFLMQIFEKFGNT-DIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYA-E-G--P 155 (354)
Q Consensus 81 aT~t~~~~~p~~a~~v~~~LGl~g~~-~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~~~~-~-~--~ 155 (354)
+|+|+++..|+++.+|+++||+ ++ .+++||++.+|+|+++||.+|..++++|.+ ++||||++|.++.. + . .
T Consensus 80 ~~~~~~~~~p~~a~~v~~~lgl--~~~~~~~~~v~~~C~~~~~al~~a~~~l~~g~~--~~~Lvv~~e~~s~~~~~~~~~ 155 (329)
T PRK07204 80 ASGTIQQAIPCTASLIQEQLGL--QHSGIPCFDINSTCLSFITALDTISYAIECGRY--KRVLIISSEISSVGLNWGQNE 155 (329)
T ss_pred ECCCCCCCCccHHHHHHHHhCC--CCCCceEEEccchhHHHHHHHHHHHHHHHCCCC--CEEEEEEeccccCCCCcccCc
Confidence 9999988889999999999999 33 479999999999999999999999999954 99999999996422 1 1 2
Q ss_pred CCCcccceeEEEEeccCCC---c-eeeeccccccccc--cc--ccccc-C------CCCCccccCCcchHHHHHHHHHHH
Q 018515 156 ARPTGGAAAVVMLVGPDAP---V-AFESKLRGSHMSH--AY--DFYKP-N------LASEYPVVDGKLSQTCYLMALDTC 220 (354)
Q Consensus 156 ~~~~~GDGAaA~ll~~~~~---~-~~~~~~~g~~~~~--~~--~~~~p-~------~~~~~~~~dg~~~~~~~~~~~~~~ 220 (354)
...+|||||+|+||++++. + .....+++.+.+. .. ....| . .+..+..++|+..+....+.++++
T Consensus 156 ~~~lfGDGAaA~ll~~~~~~~~il~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (329)
T PRK07204 156 SCILFGDGAAAVVITKGDHSSRILASHMETYSSGAHLSEIRGGGTMIHPREYSEERKEDFLFDMNGRAIFKLSSKYLMKF 235 (329)
T ss_pred ceEEEecccEEEEEEEcCCCCcEEEEEEEEecCCCCceEEecCCcCCCCcccccccccCceEEECCHHHHHHHHHHHHHH
Confidence 3477999999999997642 2 2222233322211 00 00001 0 000122356666666777788999
Q ss_pred HHHHHHHhhchhCCCCCccccceecccCCchHHHHHHHHHhhhhhhhhccccchhHhhhccCCCCCCCCCccccchhHHH
Q 018515 221 YKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEK 300 (354)
Q Consensus 221 i~~~l~~~g~~~~~~l~~~Did~~v~HQan~~ii~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (354)
++++|++++ ++++|||+|++||+|.++++.+.++|++ +.
T Consensus 236 i~~~L~~~g------l~~~did~~~~H~~~~~~~~~i~~~l~l------------------------~~----------- 274 (329)
T PRK07204 236 IDKLLMDAG------YTLADIDLIVPHQASGPAMRLIRKKLGV------------------------DE----------- 274 (329)
T ss_pred HHHHHHHcC------CCHHHCCEEEeCCCCHHHHHHHHHHcCC------------------------CH-----------
Confidence 999999999 9999999999999999999999999985 43
Q ss_pred HHHhhhhhHHHhhcccccccccccCccchHHHHHHHHHHhccC
Q 018515 301 VSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNK 343 (354)
Q Consensus 301 ~~~~~~~~~~~~k~~~~~~~~~~~GN~~saSip~~L~~~l~~~ 343 (354)
+|+..+ .++||||+|||+|+.|.++++++
T Consensus 275 -----------e~~~~~---~~~~Gn~~sas~~~~L~~~~~~g 303 (329)
T PRK07204 275 -----------ERFVTI---FEDHGNMIAASIPVALFEAIKQK 303 (329)
T ss_pred -----------HHhhhh---HhhhCcHHHHHHHHHHHHHHHcC
Confidence 676644 37999999999999999999875
No 11
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=100.00 E-value=1.2e-46 Score=363.69 Aligned_cols=281 Identities=20% Similarity=0.224 Sum_probs=230.9
Q ss_pred ceeEEeEEEEecCCccccHHHHHHhhCCCcchhhhcccceeEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEee
Q 018515 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGS 82 (354)
Q Consensus 3 ~~v~I~~ig~ylP~~~v~~~el~~~~g~~~~~i~~~~Gi~~r~~~~~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT 82 (354)
|.++|.|+|+|+|+++|+|+|+++.++.+.++|.+++|+++|+++.++++..+|+.+|+++||+++|++|+|||.||++|
T Consensus 1 ~~v~I~~~g~~lP~~~v~~~e~~~~~~~~~~~i~~~~gi~~r~~~~~~~~~~~la~~A~~~aL~~ag~~~~dId~vi~~s 80 (326)
T CHL00203 1 MGVHILSTGSSVPNFSVENQQFEDIIETSDHWISTRTGIKKRHLAPSSTSLTKLAAEAANKALDKAHMDPLEIDLIILAT 80 (326)
T ss_pred CccEEEEEEEECCCeEEcHHHHHHhcCCChhhEeeccCeEEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 56899999999999999999999999987788889999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeecccccC----CCCCCC
Q 018515 83 ETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYA----EGPARP 158 (354)
Q Consensus 83 ~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~~~~----~~~~~~ 158 (354)
+++++. ++.+..++++||+ .++.+||++++|+|+++||.+|.++|++|.+ +++|||++|..+.. +....+
T Consensus 81 ~~~~~~-~~~~~~v~~~Lg~---~~~~~~~v~~~Casg~~al~~A~~~i~sg~~--~~~Lvv~~e~~s~~~~~~~~~~~~ 154 (326)
T CHL00203 81 STPDDL-FGSASQLQAEIGA---TRAVAFDITAACSGFILALVTATQFIQNGSY--KNILVVGADTLSKWIDWSDRKTCI 154 (326)
T ss_pred CCCCCC-CchHHHHHHHhCC---CCCceeeecccchhHHHHHHHHHHHHHcCCC--CEEEEEEehhhhCcCCcccCCceE
Confidence 888765 4567899999999 4688999999999999999999999999955 99999999995422 112357
Q ss_pred cccceeEEEEeccCCC--c-eeeecccccccccccccccc------------CCCCCccccCCcchHHHHHHHHHHHHHH
Q 018515 159 TGGAAAVVMLVGPDAP--V-AFESKLRGSHMSHAYDFYKP------------NLASEYPVVDGKLSQTCYLMALDTCYKC 223 (354)
Q Consensus 159 ~~GDGAaA~ll~~~~~--~-~~~~~~~g~~~~~~~~~~~p------------~~~~~~~~~dg~~~~~~~~~~~~~~i~~ 223 (354)
+|||||+|+||++.+. + .+...++|.+.....-...| .....+..++|+..++...+.+++++++
T Consensus 155 ~fgDga~A~ll~~~~~~~~~~~~~~t~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ 234 (326)
T CHL00203 155 LFGDGAGAAIIGASYENSILGFKLCTDGKLNSHLQLMNKPVNNQSFGTTKLPQGQYQSISMNGKEVYKFAVFQVPAVIIK 234 (326)
T ss_pred EEcceeeEEEEEEcCCCCeEEEEEEEcCCCcceEEecCCCCCcccccccccccCCcceEEECCHHHHHHHHHHHHHHHHH
Confidence 8999999999987542 2 33444555443321100011 1011123356766666666788999999
Q ss_pred HHHHhhchhCCCCCccccceecccCCchHHHHHHHHHhhhhhhhhccccchhHhhhccCCCCCCCCCccccchhHHHHHH
Q 018515 224 LCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQ 303 (354)
Q Consensus 224 ~l~~~g~~~~~~l~~~Did~~v~HQan~~ii~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (354)
+|++++ ++++|||+|++||+|.++++.+.++|++ ++
T Consensus 235 ~L~~~g------~~~~did~~~~hq~~~~~~~~~~~~lgl------------------------~~-------------- 270 (326)
T CHL00203 235 CLNALN------ISIDEVDWFILHQANKRILEAIANRLSV------------------------PN-------------- 270 (326)
T ss_pred HHHHcC------CCHHHCCEEEECCCCHHHHHHHHHHhCC------------------------CH--------------
Confidence 999999 9999999999999999999999999985 43
Q ss_pred hhhhhHHHhhcccccccccccCccchHHHHHHHHHHhccCc
Q 018515 304 QLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKH 344 (354)
Q Consensus 304 ~~~~~~~~~k~~~~~~~~~~~GN~~saSip~~L~~~l~~~~ 344 (354)
+|+..+ +++||||+|||+|++|++++++++
T Consensus 271 --------~k~~~~---l~~~Gn~~sasi~~~L~~~~~~g~ 300 (326)
T CHL00203 271 --------SKMITN---LEKYGNTSAASIPLALDEAIQNNK 300 (326)
T ss_pred --------HHhhhH---HHhhCcHHHHHHHHHHHHHHHhCC
Confidence 777654 489999999999999999998754
No 12
>PLN03169 chalcone synthase family protein; Provisional
Probab=100.00 E-value=7.7e-47 Score=373.12 Aligned_cols=282 Identities=15% Similarity=0.122 Sum_probs=222.4
Q ss_pred ceeEEeEEEEecCCccccHHHHHHhh----CCCcch-------hhhcccceeEeecCC----------------------
Q 018515 3 KNVGILAMDIYFPPTCVQQEALEAHD----GASKGK-------YTIGLGQECMAFCSE---------------------- 49 (354)
Q Consensus 3 ~~v~I~~ig~ylP~~~v~~~el~~~~----g~~~~~-------i~~~~Gi~~r~~~~~---------------------- 49 (354)
..+.|.|+|+|+|+++++|+++.+.+ +...+| +.+++||++||++.+
T Consensus 20 ~~~~I~gigt~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~~~r~ 99 (391)
T PLN03169 20 GKATILALGKAFPSQLVPQEYLVDGYFRDTKCDDPALKEKLERLCKTTTVKTRYVVMSKEILDKYPELATEGTPTIKQRL 99 (391)
T ss_pred CCeEEEEEEeeCCCeecCHHHHHHHHHHHhcccCHHHHHHHHHHHHhCCcceeeEeccccchhhCccccccCCCCHHHHH
Confidence 45889999999999999999998752 223333 445699999999752
Q ss_pred ---CCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCe-eEEeecCcChHHHHHHH
Q 018515 50 ---VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDI-EGVDSTNACYGGTAALF 125 (354)
Q Consensus 50 ---~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~-~a~Di~~aC~g~~~aL~ 125 (354)
+|++++||++|+++||+++|++++|||+||++|+| ++..|+++++||++||+ ++.+ .+||++.||+||++||.
T Consensus 100 ~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t-~~~~P~~a~~l~~~LGl--~~~~~~~~d~~~gC~g~~~aL~ 176 (391)
T PLN03169 100 DIANEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSS-EARLPGGDLYLAKQLGL--SPDVQRVMLYFLGCSGGVAGLR 176 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcC-CCCCCcHHHHHHHHhCc--CCcceeeecccChhHHHHHHHH
Confidence 56889999999999999999999999999999986 78899999999999999 5556 48999999999999999
Q ss_pred HHHHHHHcCCCCCCEEEEEeeccccc--C---CC-----CCCCcccceeEEEEeccCCC-----ceeeeccccccccccc
Q 018515 126 NCVNWVESSSWDGRYGLVVCTDSAVY--A---EG-----PARPTGGAAAVVMLVGPDAP-----VAFESKLRGSHMSHAY 190 (354)
Q Consensus 126 ~A~~~i~sg~~~~~~vLVV~~e~~~~--~---~~-----~~~~~~GDGAaA~ll~~~~~-----~~~~~~~~g~~~~~~~ 190 (354)
+|..+++++ +.++||||++|.++. . .. ....+|||||+|+||++++. ..+.+...++. .++
T Consensus 177 ~A~~~~~~~--~~~~vLvv~~e~~s~~~~~~~~~~~~d~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~l~~~~~~--~ip 252 (391)
T PLN03169 177 VAKDIAENN--PGSRVLLTTSETTILGFRPPSPDRPYDLVGAALFGDGAAAVIIGADPIPVSESPFFELHTAIQQ--FLP 252 (391)
T ss_pred HHHHHHHhC--CCCeEEEEEEEcChhhccCCCccchhhhhhhhhccCceEEEEEecCCCcccCCcceEEEeeeee--EcC
Confidence 999999999 459999999999642 1 11 13578999999999987531 11222222221 111
Q ss_pred cc-----cccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHhhchhCCCCCccccc--eecccCCchHHHHHHHHHhhh
Q 018515 191 DF-----YKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNAD--YFVFHSPYNKLVQKSFARLLF 263 (354)
Q Consensus 191 ~~-----~~p~~~~~~~~~dg~~~~~~~~~~~~~~i~~~l~~~g~~~~~~l~~~Did--~~v~HQan~~ii~~~~~~l~~ 263 (354)
+. +.- ....+..++|+..++...+.+++.++++|++++ ++++|+| +|++||+|.+|++.+.++|++
T Consensus 253 ~~~~~~~~~~-~~~g~~~~~g~~v~~~~~~~~~~~i~~~L~~~g------l~~~did~~~~v~Hq~n~~il~~v~~~Lgl 325 (391)
T PLN03169 253 GTEKTIDGRL-TEEGINFKLGRELPQKIEDNIEGFCKKLMKKAG------LVEKDYNDLFWAVHPGGPAILNRLEKKLKL 325 (391)
T ss_pred CCccccCcee-cCCceEEEECcHHHHHHHHHHHHHHHHHHHHcC------CCCCCCCcceEEecCCCHHHHHHHHHHcCC
Confidence 00 000 001122355676777788889999999999999 9999999 999999999999999999985
Q ss_pred hhhhhccccchhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhHHHhhcccccccccccCccchHHHHHHHHHHhccC
Q 018515 264 NDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNK 343 (354)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~GN~~saSip~~L~~~l~~~ 343 (354)
++ +|+..+..++++||||||||||++|.++++++
T Consensus 326 ------------------------~~----------------------ek~~~s~~~l~~~GNtsSasip~~L~~~~~~~ 359 (391)
T PLN03169 326 ------------------------AP----------------------EKLECSRRALMDYGNVSSNTIVYVLEYMREEL 359 (391)
T ss_pred ------------------------CH----------------------HHHHHHHHHHHHhCCchHhHHHHHHHHHHHhh
Confidence 44 88877666679999999999999999998654
Q ss_pred c
Q 018515 344 H 344 (354)
Q Consensus 344 ~ 344 (354)
+
T Consensus 360 ~ 360 (391)
T PLN03169 360 K 360 (391)
T ss_pred c
Confidence 3
No 13
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=100.00 E-value=2.7e-46 Score=368.41 Aligned_cols=281 Identities=16% Similarity=0.171 Sum_probs=230.9
Q ss_pred ceeEEeEEEEecCCccccHHHHHHhhCCCcchhhhcccceeEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEee
Q 018515 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGS 82 (354)
Q Consensus 3 ~~v~I~~ig~ylP~~~v~~~el~~~~g~~~~~i~~~~Gi~~r~~~~~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT 82 (354)
++++|.|+|.|+|+++++|+|+.+.++.+++|+.+++||++|+++.++++..+|+++|+++||+++|++++|||+||++|
T Consensus 46 ~~~~I~g~g~~lP~~~v~n~el~~~~~~~~~~i~~~tGi~~R~~~~~~~~~~~La~~Aa~~aL~~agi~~~dId~li~~s 125 (379)
T PLN02326 46 SGSKLVGCGSAVPKLLITNDDLSKLVDTSDEWIATRTGIRNRRVLSGDETLTSLAVEAAKKALEMAGVDPEDVDLVLLCT 125 (379)
T ss_pred CCcEEEEEEEECCCceecHHHHHHhcCCchhheecccCcceEeecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 46899999999999999999999999888899999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeecccc-cCC---CCCCC
Q 018515 83 ETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-YAE---GPARP 158 (354)
Q Consensus 83 ~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~~-~~~---~~~~~ 158 (354)
+++++. ++.+..|+++||+ +++.+||++++|+|+++||.+|..+|++|.+ ++||||++|..+ +.+ .....
T Consensus 126 ~~~~~~-~~~a~~v~~~LG~---~~~~~~dv~~~Ca~~~~aL~~A~~~l~~g~~--~~vLVv~~e~~s~~~~~~d~~~~~ 199 (379)
T PLN02326 126 SSPDDL-FGSAPQVQAALGC---TNALAFDLTAACSGFVLGLVTAARFIRGGGY--KNVLVIGADALSRYVDWTDRGTCI 199 (379)
T ss_pred CCCCcc-CcHHHHHHHHhCC---CCCceeeccccchHHHHHHHHHHHHHHcCCC--CEEEEEEechhcCCCCccccCceE
Confidence 888774 5779999999999 4789999999999999999999999999954 999999999953 322 12346
Q ss_pred cccceeEEEEeccCC----Cc-eeeeccccccccccc----ccc-----ccC----------CCCCccccCCcchHHHHH
Q 018515 159 TGGAAAVVMLVGPDA----PV-AFESKLRGSHMSHAY----DFY-----KPN----------LASEYPVVDGKLSQTCYL 214 (354)
Q Consensus 159 ~~GDGAaA~ll~~~~----~~-~~~~~~~g~~~~~~~----~~~-----~p~----------~~~~~~~~dg~~~~~~~~ 214 (354)
+|||||+|+||++++ .+ .+.+.++|.+...+. +.. .+. .+..+..++|+..++...
T Consensus 200 lfGDGAaAvlL~~~~~~~~~i~~~~~~t~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~ 279 (379)
T PLN02326 200 LFGDGAGAVVLQACDDDEDGLLGFDMHSDGNGHKHLHATFKGEDDDSSGGNTNGVGDFPPKKASYSCIQMNGKEVFKFAV 279 (379)
T ss_pred EEcceeEEEEEEEcCCCCCceEEEEEEEcCCCCCeEEecCCCCcccccccccccccccccccccccceEecCHHHHHHHH
Confidence 899999999999753 12 234444554432210 000 000 000112356666666667
Q ss_pred HHHHHHHHHHHHHhhchhCCCCCccccceecccCCchHHHHHHHHHhhhhhhhhccccchhHhhhccCCCCCCCCCcccc
Q 018515 215 MALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQ 294 (354)
Q Consensus 215 ~~~~~~i~~~l~~~g~~~~~~l~~~Did~~v~HQan~~ii~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (354)
+.+++.++++|++++ ++++|||+|+|||+|.++++.+.++|++ +.
T Consensus 280 ~~~~~~i~~~L~~~g------l~~~dId~~v~Hq~n~~~~~~~~~~Lgl------------------------~~----- 324 (379)
T PLN02326 280 RCVPQVIESALQKAG------LTAESIDWLLLHQANQRIIDAVAQRLGI------------------------PP----- 324 (379)
T ss_pred HHHHHHHHHHHHHcC------CCHHHCCEEEECCCCHHHHHHHHHHcCC------------------------CH-----
Confidence 788899999999999 9999999999999999999999999985 43
Q ss_pred chhHHHHHHhhhhhHHHhhcccccccccccCccchHHHHHHHHHHhccCc
Q 018515 295 SRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKH 344 (354)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~GN~~saSip~~L~~~l~~~~ 344 (354)
+|+..++ ++||||+|||+|++|++++++++
T Consensus 325 -----------------ek~~~~l---~~~GNt~sAsi~~~L~~~~~~g~ 354 (379)
T PLN02326 325 -----------------EKVISNL---ANYGNTSAASIPLALDEAVRSGK 354 (379)
T ss_pred -----------------HHeeecH---hhcCcHHHHHHHHHHHHHHHcCC
Confidence 7886654 79999999999999999998654
No 14
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=2.1e-45 Score=354.09 Aligned_cols=280 Identities=16% Similarity=0.148 Sum_probs=232.6
Q ss_pred CCceeEEeEEEEecCCccccHHHHHHhhCCCcchhhhcccceeEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCccEEEE
Q 018515 1 MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEV 80 (354)
Q Consensus 1 ~~~~v~I~~ig~ylP~~~v~~~el~~~~g~~~~~i~~~~Gi~~r~~~~~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~ 80 (354)
|.++++|.++|+|+|+++++++|+.+..+.+.+++.+++|+++|+++.++++..+|+++|+++||+++|+++++||+||+
T Consensus 1 ~~~~~~I~~ig~~~P~~~v~~~e~~~~~~~~~~~i~~~~Gi~~r~~~~~~~~~~~la~~A~~~al~~ag~~~~~Id~li~ 80 (325)
T PRK12879 1 MMSYARITGIGTYVPPRVLTNDDLETFIDTSDEWIVQRTGIKERRIAHVEEYTSDLAIKAAERALARAGLDAEDIDLIIV 80 (325)
T ss_pred CCCCCEEEEEEEECCCcEEcHHHHHHhcCCCHHHhhhccCceEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 56789999999999999999999999988888889889999999999999999999999999999999999999999999
Q ss_pred eeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeecccccC-C---CCC
Q 018515 81 GSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYA-E---GPA 156 (354)
Q Consensus 81 aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~~~~-~---~~~ 156 (354)
+|+++++..|+.+.+|++.||+ +++.+||++++|+|++.||.+|..+|++|. .++||||++|..+.. + ...
T Consensus 81 ~~~~~~~~~~~~a~~l~~~lg~---~~~~~~~v~~~C~~~~~al~~A~~~l~~g~--~~~~Lvv~~e~~s~~~~~~~~~~ 155 (325)
T PRK12879 81 ATTTPDYLFPSTASQVQARLGI---PNAAAFDINAACAGFLYGLETANGLITSGL--YKKVLVIGAERLSKVTDYTDRTT 155 (325)
T ss_pred EcCCCCCCCChHHHHHHHHhCC---CCCcEEEECccchHHHHHHHHHHHHHHcCC--CCEEEEEEehhhcCcCCccccCc
Confidence 9999888889999999999999 458899999999999999999999999995 499999999985321 1 123
Q ss_pred CCcccceeEEEEeccCCC---c-eeeeccccccccccccccccCCC----------CCccccCCcchHHHHHHHHHHHHH
Q 018515 157 RPTGGAAAVVMLVGPDAP---V-AFESKLRGSHMSHAYDFYKPNLA----------SEYPVVDGKLSQTCYLMALDTCYK 222 (354)
Q Consensus 157 ~~~~GDGAaA~ll~~~~~---~-~~~~~~~g~~~~~~~~~~~p~~~----------~~~~~~dg~~~~~~~~~~~~~~i~ 222 (354)
..+|||||+|+||++++. + ....++++.+.+.. ..+.++ ..+..++|+..+....+.++++++
T Consensus 156 ~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 232 (325)
T PRK12879 156 CILFGDGAGAVVLEATENEPGFIDYVLGTDGDGGDIL---YRTGLGTTMDRDALSGDGYIVQNGREVFKWAVRTMPKGAR 232 (325)
T ss_pred eEEEeecceEEEEEecCCCCCeEEEEEEEcCCCCCeE---EEcCCCCCCCccccccCccEEEcCHHHHHHHHHHHHHHHH
Confidence 467999999999998652 2 23333444433221 111111 112235566555566777889999
Q ss_pred HHHHHhhchhCCCCCccccceecccCCchHHHHHHHHHhhhhhhhhccccchhHhhhccCCCCCCCCCccccchhHHHHH
Q 018515 223 CLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVS 302 (354)
Q Consensus 223 ~~l~~~g~~~~~~l~~~Did~~v~HQan~~ii~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (354)
++|++++ ++++|||+|++||+|.++++.+.++|++ +.
T Consensus 233 ~~L~~~g------~~~~did~~~~h~~~~~~~~~~~~~lg~------------------------~~------------- 269 (325)
T PRK12879 233 QVLEKAG------LTKDDIDWVIPHQANLRIIESLCEKLGI------------------------PM------------- 269 (325)
T ss_pred HHHHHcC------CCHHHCCEEEECCCCHHHHHHHHHHcCC------------------------CH-------------
Confidence 9999999 9999999999999999999999999985 43
Q ss_pred HhhhhhHHHhhcccccccccccCccchHHHHHHHHHHhccC
Q 018515 303 QQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNK 343 (354)
Q Consensus 303 ~~~~~~~~~~k~~~~~~~~~~~GN~~saSip~~L~~~l~~~ 343 (354)
+|+..+ +++|||++|||+|+.|+++++++
T Consensus 270 ---------~~~~~~---~~~~Gn~~sas~~~~L~~~~~~g 298 (325)
T PRK12879 270 ---------EKTLVS---VEYYGNTSAATIPLALDLALEQG 298 (325)
T ss_pred ---------HHhhhh---HhhhCchHHHHHHHHHHHHHHcC
Confidence 676554 37999999999999999999874
No 15
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.8e-45 Score=356.80 Aligned_cols=276 Identities=18% Similarity=0.163 Sum_probs=228.3
Q ss_pred ceeEEeEEEEecCCccccHHHHHHhh-------CCCcchhhhcccceeEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCc
Q 018515 3 KNVGILAMDIYFPPTCVQQEALEAHD-------GASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQI 75 (354)
Q Consensus 3 ~~v~I~~ig~ylP~~~v~~~el~~~~-------g~~~~~i~~~~Gi~~r~~~~~~e~~~~La~~Aa~~aL~~agi~~~dI 75 (354)
.+++|.++|+|+|+++++|+++.+.+ +.+.+++.+.+|+++|+++.++++..+|+++|+++||+++|++++||
T Consensus 4 ~~v~I~~~g~~lP~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~I 83 (338)
T PRK09258 4 SNVAILSLAYELAPVVVTSSEIEERLAPLYERLRLPPGQLEALTGIRERRWWPEGTQLSDGAIAAGRKALAEAGIDPSDI 83 (338)
T ss_pred cceEEEEEEecCCCccCcHHHHHHHhhhcccccCCChhHhhhhcCceeEecCCCCCCHHHHHHHHHHHHHHHcCCCHHHC
Confidence 46999999999999999999999764 35667788899999999998899999999999999999999999999
Q ss_pred cEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeecccccC---
Q 018515 76 GRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYA--- 152 (354)
Q Consensus 76 d~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~~~~--- 152 (354)
|+||++|+++++..|+++.+|+++||+ ++++.+||++++|+|++.||++|..+|++|.+ ++||||++|.++..
T Consensus 84 d~li~~s~~~~~~~p~~a~~v~~~lgl--~~~~~~~~v~~~C~~~~~al~~A~~~i~~g~~--~~~Lvv~~e~~s~~~~~ 159 (338)
T PRK09258 84 GLLINTSVCRDYLEPATACRVHHNLGL--PKSCANFDVSNACLGFLNGMLDAANMIELGQI--DYALVVSGESAREIVEA 159 (338)
T ss_pred CEEEEEcCCCCCCCChHHHHHHHHcCC--CCCCceeehhhhhHHHHHHHHHHHHHHHcCCC--CEEEEEEecccchhccc
Confidence 999999999888889999999999999 55789999999999999999999999999954 99999999985321
Q ss_pred -------CCCC---------CCcccceeEEEEeccCCC----cee---eeccccccccccccccccCCCCCccccCCcch
Q 018515 153 -------EGPA---------RPTGGAAAVVMLVGPDAP----VAF---ESKLRGSHMSHAYDFYKPNLASEYPVVDGKLS 209 (354)
Q Consensus 153 -------~~~~---------~~~~GDGAaA~ll~~~~~----~~~---~~~~~g~~~~~~~~~~~p~~~~~~~~~dg~~~ 209 (354)
+... ..+|||||+|+||++.+. ..+ ...+++.+. +.... +..+..++++..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~GDGA~A~ll~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~~~~ 233 (338)
T PRK09258 160 TIDRLLAPETTREDFAQSFATLTLGSGAAAAVLTRGSLHPRGHRLLGGVTRAATEHH----ELCQG--GRDGMRTDAVGL 233 (338)
T ss_pred hhhhhccCccchhhhhhccceEEecccceEEEEecCCCCCCcceeeeeeeecCCCcc----ccccc--CccceEEcHHHH
Confidence 1111 257899999999997531 111 111122211 11111 122344677777
Q ss_pred HHHHHHHHHHHHHHHHHHhhchhCCCCCccccceecccCCchHHHHHHHHHhhhhhhhhccccchhHhhhccCCCCCCCC
Q 018515 210 QTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSG 289 (354)
Q Consensus 210 ~~~~~~~~~~~i~~~l~~~g~~~~~~l~~~Did~~v~HQan~~ii~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (354)
+..+.+.+++.++++|++.+ ++++|||+|+|||+|.++++.+.++|++ +.
T Consensus 234 ~~~~~~~~~~~~~~~L~~~g------~~~~did~~i~H~~~~~~~~~~~~~lgl------------------------~~ 283 (338)
T PRK09258 234 LKEGVELAVDTWEAFLAQLG------WAVEQVDRVICHQVGAAHTRAILKALGI------------------------DP 283 (338)
T ss_pred HHHHHHHHHHHHHHHHHHcC------CCHHHCCEEecCCCCHHHHHHHHHHhCC------------------------CH
Confidence 77788888899999999999 9999999999999999999999999985 43
Q ss_pred CccccchhHHHHHHhhhhhHHHhhcccccccccccCccchHHHHHHHHHHhccC
Q 018515 290 DESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNK 343 (354)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~GN~~saSip~~L~~~l~~~ 343 (354)
+|+..++ ++||||+|||+|++|+++++++
T Consensus 284 ----------------------~k~~~~~---~~~GN~~sas~~~~L~~~~~~g 312 (338)
T PRK09258 284 ----------------------EKVFTTF---PTLGNMGPASLPITLAMAAEEG 312 (338)
T ss_pred ----------------------HHceehH---hhhCCcHHhHHHHHHHHHHHhC
Confidence 7877654 7999999999999999998774
No 16
>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism]
Probab=100.00 E-value=3.4e-45 Score=344.16 Aligned_cols=342 Identities=63% Similarity=1.037 Sum_probs=309.7
Q ss_pred ceeEEeEEEEecCCccccHHHHHHhhCCCcchhhhcccceeEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEee
Q 018515 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGS 82 (354)
Q Consensus 3 ~~v~I~~ig~ylP~~~v~~~el~~~~g~~~~~i~~~~Gi~~r~~~~~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT 82 (354)
.+++|.++-.|+|...|+++|+++..|.+..++..++|+.++.|+.+.|+...|+..+.++++++.+|+++.|+.|-++|
T Consensus 10 ~dvGI~aieiyfP~~yV~Q~elEk~d~vs~gKytIGLGq~~MgfcsdrEDi~Sl~ltvvs~Lmery~i~~~~IGRLEVGT 89 (462)
T KOG1393|consen 10 KDVGIIAIEIYFPSQYVDQEELEKFDGVSAGKYTIGLGQTQMGFCSDREDIISLSLTVVSRLMERYNIDPDSIGRLEVGT 89 (462)
T ss_pred cccceeEEEEEcCccccChhhHhhcCCccccceEeccCcceecccCchhhhhhhhHHHHHHHHHHhCCChhhcceEEecc
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeecccccCCCCCCCcccc
Q 018515 83 ETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGA 162 (354)
Q Consensus 83 ~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~~~~~~~~~~~~GD 162 (354)
+|-.+.+++.-..+++.++-.|..++...|..+||.|+..||..|.+||++..+++|.+|||++|++-|..+..+++-|+
T Consensus 90 ETiiDKSKSVKt~LMqLF~~sgNtdIEGiDttnACYGGtaALfnavnWiESssWDGr~aivV~gDIAvY~~G~aRpTGGA 169 (462)
T KOG1393|consen 90 ETIIDKSKSVKTVLMQLFEESGNTDIEGIDTTNACYGGTAALFNAVNWIESSSWDGRYAIVVCGDIAVYAKGNARPTGGA 169 (462)
T ss_pred eeccccchHHHHHHHHHhhhcCCCccccccccccccccHHHHHHHhhhhhhcccCCceeEEEEeeEEEecCCCCCCCCCc
Confidence 99999999999999999886567889999999999999999999999999999999999999999999988888999999
Q ss_pred eeEEEEeccCCCceeeeccccccccccccccccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHhhchhC--CCCCccc
Q 018515 163 AAVVMLVGPDAPVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEG--KQFSLSN 240 (354)
Q Consensus 163 GAaA~ll~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~dg~~~~~~~~~~~~~~i~~~l~~~g~~~~--~~l~~~D 240 (354)
||+|+|++++.++.++.+..++|+.+.+||++|..-++||++||.+++++|+.++......+.++...+.+ .....++
T Consensus 170 gAVAmLIgPnApi~ferglr~thM~hayDFyKPdl~SEyPvVDGklSi~cYl~Ald~cY~~~~kK~~~~~~~~~~~~l~~ 249 (462)
T KOG1393|consen 170 GAVAMLIGPNAPIIFERGLRATHMQHAYDFYKPDLLSEYPVVDGKLSIQCYLSALDRCYTVYRKKIAAQWQKSGSDNLNS 249 (462)
T ss_pred ceEEEEEcCCCceEecccchhhhhhhhhhccCCCCCCcCceecCeehHHHHHHHHHHHHHHHHHHHHHHhccccCccccc
Confidence 99999999988888888889999999999999998899999999999999999999888888877764321 1244679
Q ss_pred cceecccCCchHHHHHHHHHhhhhhhhhccccchhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhHHHhhccccccc
Q 018515 241 ADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLI 320 (354)
Q Consensus 241 id~~v~HQan~~ii~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 320 (354)
+|++|+|.|..|++++...||.++++.++++...|.. ....++.-+|+|+|+++||+|.+..++.|.+|+.+++.+
T Consensus 250 fdy~ifHsP~cKlvqKs~arl~ynDf~~~~~~~~~~~----~~~~~~~l~~s~~dr~~ek~~~~~s~~~~~~Kt~~sl~~ 325 (462)
T KOG1393|consen 250 FDYIIFHSPYCKLVQKSLARLLYNDFLLNPSQLPESA----GLESTLKLDESYTDRDLEKAFIKISKPIFKKKTKPSLLA 325 (462)
T ss_pred CCeEEEeCchhhhHHHHHHHhhhhhhhhccccccccc----cccccccccccccchHHHHHHHHHhHHHHHhhccceeEe
Confidence 9999999999999999999999998877665432221 111567778999999999999999999999999999999
Q ss_pred ccccCccchHHHHHHHHHHhccCchhhh
Q 018515 321 PKQVGNMYTASLYAALASLIHNKHSELV 348 (354)
Q Consensus 321 ~~~~GN~~saSip~~L~~~l~~~~~~~~ 348 (354)
.++.|||||+|++.+|+++|....+..+
T Consensus 326 ~~~~GNmYTaSly~~l~sll~~~~~d~l 353 (462)
T KOG1393|consen 326 PRRNGNMYTASLYASLASLLSAVPADEL 353 (462)
T ss_pred eccCCccccHHHHHHHHHHHhccchhhh
Confidence 9999999999999999999998755444
No 17
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=2.9e-45 Score=360.90 Aligned_cols=286 Identities=19% Similarity=0.138 Sum_probs=218.4
Q ss_pred ceeEEeEEEEecCCccccHHHHHHhhCCC-------cchhhhcccceeEeecCC-----CCCHHHHHHHHHHHHHHHcCC
Q 018515 3 KNVGILAMDIYFPPTCVQQEALEAHDGAS-------KGKYTIGLGQECMAFCSE-----VEDVISMSLTAVTNLLEKYKI 70 (354)
Q Consensus 3 ~~v~I~~ig~ylP~~~v~~~el~~~~g~~-------~~~i~~~~Gi~~r~~~~~-----~e~~~~La~~Aa~~aL~~agi 70 (354)
|+++|.|+|+|+|+++++|+++.+.++.. .+|+.+++||++|+++.+ .++..+|+++|+++||+++|+
T Consensus 1 ~~v~I~gig~~lP~~~v~n~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~La~~A~~~aL~~agi 80 (378)
T PRK06816 1 MNVYITSTGAFLPGEPVSNDEMEAYLGLINGKPSRARRIILRNNGIKTRHYALDPEGRPTHSNAQMAAEAIRDLLDDAGF 80 (378)
T ss_pred CCeEEEeeeecCCCCccCHHHHHHHHhhccCCcHHHHHHHHHhCCCceEEEEECCCCCCCCCHHHHHHHHHHHHHHHcCC
Confidence 57899999999999999999998877632 357888999999998753 357899999999999999999
Q ss_pred CcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeecccc
Q 018515 71 DPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV 150 (354)
Q Consensus 71 ~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~~ 150 (354)
+++|||+||++|+++++..|+.+..|+++||+ +++.++|++.+|+|+++||.+|..++++|.+ ++||||++|.++
T Consensus 81 ~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl---~~~~~~~v~~~Cas~~~al~~A~~~i~sg~~--~~vLvv~~E~~s 155 (378)
T PRK06816 81 SLGDIELLACGTSQPDQLMPGHASMVHGELGA---PPIEVVSSAGVCAAGMMALKYAYLSVKAGES--RNAVATASELAS 155 (378)
T ss_pred CHHHCCEEEEEECCCCcCChHHHHHHHhhCCC---CCCceeeecCcCHHHHHHHHHHHHHHHCCCC--CEEEEEeEccch
Confidence 99999999999999888889999999999999 4578999999999999999999999999954 999999999963
Q ss_pred cC-C---------------C-C--------CCCcccceeEEEEeccCCC---c--eeeeccccccccccccccccCCCC-
Q 018515 151 YA-E---------------G-P--------ARPTGGAAAVVMLVGPDAP---V--AFESKLRGSHMSHAYDFYKPNLAS- 199 (354)
Q Consensus 151 ~~-~---------------~-~--------~~~~~GDGAaA~ll~~~~~---~--~~~~~~~g~~~~~~~~~~~p~~~~- 199 (354)
.. + . + ..++|||||+|+||++.+. + .+....++++... ...+.+.++.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fGDGA~A~vl~~~~~~~g~~l~~~~~~~~~~~~~-~~~~~~~g~~~ 234 (378)
T PRK06816 156 RWFRASRFEAEEEKLAELEENPEIAFEKDFLRWMLSDGAGAVLLENKPRPDGLSLRIDWIDLRSYAGE-LPVCMYAGAEK 234 (378)
T ss_pred hhhhhhhhhhHHHHhhcCcccCCCCCCCCCCCEeeecccEEEEEEecCCCCCceEEEEEEeeeccccc-CccceecCCcc
Confidence 11 0 0 0 0246899999999986432 1 1221122222211 1111111000
Q ss_pred --------------C--------ccccCCcchHHHHHHHHHHHHHHHHHHhhchhCCCCCccccceecccCCchHHHHHH
Q 018515 200 --------------E--------YPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKS 257 (354)
Q Consensus 200 --------------~--------~~~~dg~~~~~~~~~~~~~~i~~~l~~~g~~~~~~l~~~Did~~v~HQan~~ii~~~ 257 (354)
. +..++++...+.+...+++.++++|++.| ++++|||+|+|||+|.+|++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g------l~~~DId~~v~Hq~n~~~~~~v 308 (378)
T PRK06816 235 NEDGSLKGWSDYPPEEAEAASALSLKQDVRLLNENIVVYTIKPLLELVDKRN------LDPDDIDYFLPHYSSEYFREKI 308 (378)
T ss_pred CCCCCccCcccCCHHHHHhccCchHHhHHHHHHHHhHHHHHHHHHHHHHHcC------CChhhCCEEeeCcccHHHHHHH
Confidence 0 11123333333455556889999999999 9999999999999999999999
Q ss_pred HHHhhhhhhhhccccchhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhHHHhhcccccccccccCccchHHHHHHHH
Q 018515 258 FARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALA 337 (354)
Q Consensus 258 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~GN~~saSip~~L~ 337 (354)
.++|+..+ + ++++ +|+..++ ++||||+|||+|++|+
T Consensus 309 ~~~l~~~~------~-------------gl~~----------------------~k~~~~~---~~~GNt~sAsipi~L~ 344 (378)
T PRK06816 309 VELLAKAG------F-------------MIPE----------------------EKWFTNL---ATVGNTGSASIYIMLD 344 (378)
T ss_pred HHHHHhcc------C-------------CCCh----------------------hheEEec---cccccccchHHHHHHH
Confidence 99982000 0 2354 7877654 7999999999999999
Q ss_pred HHhccCc
Q 018515 338 SLIHNKH 344 (354)
Q Consensus 338 ~~l~~~~ 344 (354)
+++++++
T Consensus 345 ~a~~~g~ 351 (378)
T PRK06816 345 ELLNSGR 351 (378)
T ss_pred HHHHcCC
Confidence 9998643
No 18
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=100.00 E-value=4.6e-45 Score=357.33 Aligned_cols=282 Identities=18% Similarity=0.181 Sum_probs=222.7
Q ss_pred eEEeEEEEecCCccccHHHHHHhhCC--Cc----------chhhhcccceeEeecCC--CC-------------------
Q 018515 5 VGILAMDIYFPPTCVQQEALEAHDGA--SK----------GKYTIGLGQECMAFCSE--VE------------------- 51 (354)
Q Consensus 5 v~I~~ig~ylP~~~v~~~el~~~~g~--~~----------~~i~~~~Gi~~r~~~~~--~e------------------- 51 (354)
++|.++|+|+|+++++|+++.+.++. +. +|+.+++||++||++.+ ++
T Consensus 2 ~~I~~~~~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gI~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (361)
T cd00831 2 ATILAIGTAVPPHRVPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPGGEETYAPRPEMSPSLDERNDIA 81 (361)
T ss_pred cEEEEEEEeCCCCcCCHHHhhHHHHhcCChhhhHHHHHHHHHHHhhcceeEEEEEecCchhhcCCccccCCCcCcchhhH
Confidence 68999999999999999999988752 22 66778899999999876 33
Q ss_pred --CHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeec-CcChHHHHHHHHHH
Q 018515 52 --DVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST-NACYGGTAALFNCV 128 (354)
Q Consensus 52 --~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~-~aC~g~~~aL~~A~ 128 (354)
++.+|+++|+++||+++|++++|||+||++|+++ +..|+++.+|+++||+ ++++.+||++ +||+|+++||++|.
T Consensus 82 ~~~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~-~~~P~~a~~i~~~lgl--~~~~~~~dv~~~~C~~~~~al~~A~ 158 (361)
T cd00831 82 LEEARELAEEAARGALDEAGLRPSDIDHLVVNTSTG-NPTPSLDAMLINRLGL--RPDVKRYNLGGMGCSAGAIALDLAK 158 (361)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCC-CCCCCHHHHHHHHhCC--CcccchhccccccchhHHHHHHHHH
Confidence 5899999999999999999999999999999886 6789999999999999 5579999998 89999999999999
Q ss_pred HHHHcCCCCCCEEEEEeeccccc--CCCC------CCCcccceeEEEEeccCCCc----eeeeccccccccccccc----
Q 018515 129 NWVESSSWDGRYGLVVCTDSAVY--AEGP------ARPTGGAAAVVMLVGPDAPV----AFESKLRGSHMSHAYDF---- 192 (354)
Q Consensus 129 ~~i~sg~~~~~~vLVV~~e~~~~--~~~~------~~~~~GDGAaA~ll~~~~~~----~~~~~~~g~~~~~~~~~---- 192 (354)
+++++| +.++||||++|.++. ...+ ...+|||||+|+||++++.. ...+..++.+.....+.
T Consensus 159 ~~~~~~--~~~~aLvv~~e~~s~~~~~~d~~~~~~~~~lfGDgaaA~ll~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 236 (361)
T cd00831 159 DLLEAN--PGARVLVVSTELCSLWYRGPDHRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRAASTLLPDSEDAM 236 (361)
T ss_pred HHHHHC--CCCEEEEEEeecccceeCCCCcHHHhhhhhhccCCceEEEEEcCCCcccccccceeeecccceeeecCCCce
Confidence 999999 459999999999642 2111 24789999999999976421 01111222222211110
Q ss_pred -cccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHh--hchhCCCCCccccceecccCCchHHHHHHHHHhhhhhhhhc
Q 018515 193 -YKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKY--EKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRN 269 (354)
Q Consensus 193 -~~p~~~~~~~~~dg~~~~~~~~~~~~~~i~~~l~~~--g~~~~~~l~~~Did~~v~HQan~~ii~~~~~~l~~~~~~~~ 269 (354)
+++. ...+..+.++...+.+.+.+++.++++|+++ + ++.+|||+|++||+|.+|++.+.++|++
T Consensus 237 ~~~~~-~~~~~~~~~~~v~~~~~~~~~~~i~~~L~~~~~g------~~~~did~~~~H~~~~~i~~~v~~~lgl------ 303 (361)
T cd00831 237 GWHLG-EEGLTFVLSRDVPRLVEKNLERVLRKLLARLGIG------LFKLAFDHWCVHPGGRAVLDAVEKALGL------ 303 (361)
T ss_pred EEEEE-cceEEEEeChhHHHHHHHHHHHHHHHHhccccCC------CccccceEEEECCCChHHHHHHHHHcCC------
Confidence 1110 0011112233445566778889999999999 8 9999999999999999999999999985
Q ss_pred cccchhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhHHHhhcccccccccccCccchHHHHHHHHHHhccCc
Q 018515 270 ASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKH 344 (354)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~GN~~saSip~~L~~~l~~~~ 344 (354)
++ +|+..++.++++||||+|||+|++|.+++++++
T Consensus 304 ------------------~~----------------------~~~~~s~~~l~~~GN~~sasi~~~L~~~~~~g~ 338 (361)
T cd00831 304 ------------------SP----------------------EDLEASRMVLRRYGNMSSSSVLYVLAYMEAKGR 338 (361)
T ss_pred ------------------CH----------------------HHHHHHHHHHHHhCCchhccHHHHHHHHHHhCC
Confidence 43 777666666789999999999999999998754
No 19
>PRK06840 hypothetical protein; Validated
Probab=100.00 E-value=6.3e-44 Score=346.32 Aligned_cols=279 Identities=15% Similarity=0.101 Sum_probs=224.0
Q ss_pred CCceeEEeEEEEecCCccccHHHHHHhhCCCcchhhhcccceeEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCccEEEE
Q 018515 1 MAKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEV 80 (354)
Q Consensus 1 ~~~~v~I~~ig~ylP~~~v~~~el~~~~g~~~~~i~~~~Gi~~r~~~~~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~ 80 (354)
|.|+++|.++|+|+|+++++|+++++..+.+.+++.+++|+++|+++.++++..+|+++|+++||+++|++|+|||+||+
T Consensus 1 ~~~~v~I~~~~~~lP~~~v~~~~l~~~~g~~~~~~~~~~Gi~~r~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~ 80 (339)
T PRK06840 1 MEMNVGIVGTGVYLPKDVMTAEEIAEKTGIPEEVVIEKFGIYEKPVPGPEDHTSDMAIAAAKPALKQAGVDPAAIDVVIY 80 (339)
T ss_pred CCCceEEEEEEEeCCCcccCHHHHHHHhCCCHHHHhhhcCcceEeeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred eec-cCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHHHHHc-CCCCCCEEEEEeecccc----cCCC
Q 018515 81 GSE-TVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVES-SSWDGRYGLVVCTDSAV----YAEG 154 (354)
Q Consensus 81 aT~-t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~~i~s-g~~~~~~vLVV~~e~~~----~~~~ 154 (354)
+++ ++++..|+++++|+++||+ +++.+||++++|+|+++||.+|.+++++ |.+ +++|||++|..+ +.+.
T Consensus 81 ~~~~~~~~~~p~~a~~l~~~lGl---~~~~~~~v~~~C~~~~~al~~A~~~l~~~g~~--~~~Lvv~~~~~s~~~~~~~~ 155 (339)
T PRK06840 81 IGSEHKDYPVWSSAPKIQHEIGA---KNAWAFDIMAVCASFPIALKVAKDLLYSDPSI--ENVLLVGGYRNSDLVDYDNP 155 (339)
T ss_pred eccCCCCCCCCchHHHHHHHhCC---CCcccccccccchHHHHHHHHHHHHHhcCCCc--cEEEEEeecccccccCcCCC
Confidence 754 5667789999999999999 4788999999999999999999999999 754 899999999842 1112
Q ss_pred CCC--CcccceeEEEEeccCCC---c-eeeeccccccccccccccccCCCCCcc-------------ccCCcchHHH---
Q 018515 155 PAR--PTGGAAAVVMLVGPDAP---V-AFESKLRGSHMSHAYDFYKPNLASEYP-------------VVDGKLSQTC--- 212 (354)
Q Consensus 155 ~~~--~~~GDGAaA~ll~~~~~---~-~~~~~~~g~~~~~~~~~~~p~~~~~~~-------------~~dg~~~~~~--- 212 (354)
... ++|||||+|+||+++++ + .....+++++.+.. ..|.++...| .+++...++.
T Consensus 156 ~~~~~~~~GDgAaA~ll~~~~~~~~il~~~~~t~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (339)
T PRK06840 156 RTRFMFNFAAGGSAALLKKDAGKNRILGSAIITDGSFSEDV---RVPAGGTKQPASPETVENRQHYLDVIDPESMKERLD 232 (339)
T ss_pred CeeeeccCCCceeEEEEEecCCCCceEEEEEEEcCCccceE---EecCCCcCCCCcccccccccceEEEcCcHHHHHHhH
Confidence 222 45799999999997653 2 23333455443321 2232222111 1122222222
Q ss_pred --HHHHHHHHHHHHHHHhhchhCCCCCccccceecccCCchHHHHHHHHHhhhhhhhhccccchhHhhhccCCCCCCCCC
Q 018515 213 --YLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGD 290 (354)
Q Consensus 213 --~~~~~~~~i~~~l~~~g~~~~~~l~~~Did~~v~HQan~~ii~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (354)
.+..++++++++|++++ ++++|||+|++||+|.++++.+.++|++ ++
T Consensus 233 ~~~~~~~~~~i~~~L~~~g------l~~~did~~~~h~~~~~~~~~~~~~Lgl------------------------~~- 281 (339)
T PRK06840 233 EVSIPNFLKVIREALRKSG------YTPKDIDYLAILHMKRSAHIALLEGLGL------------------------TE- 281 (339)
T ss_pred hhHHHHHHHHHHHHHHHcC------CCHHHCCEEEECCcCHHHHHHHHHHcCC------------------------CH-
Confidence 23346789999999999 9999999999999999999999999985 43
Q ss_pred ccccchhHHHHHHhhhhhHHHhhcccccccccccCccchHHHHHHHHHHhccC
Q 018515 291 ESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNK 343 (354)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~GN~~saSip~~L~~~l~~~ 343 (354)
+|+. . +++||||+|||+|+.|.++++++
T Consensus 282 ---------------------~~~~-~---~~~~Gn~~sas~~~~L~~~~~~~ 309 (339)
T PRK06840 282 ---------------------EQAI-Y---LDEYGHLGQLDQILSLHLALEQG 309 (339)
T ss_pred ---------------------HHeE-e---HHhccchhhhhHHHHHHHHHHcC
Confidence 6763 2 47999999999999999998764
No 20
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=100.00 E-value=1.2e-43 Score=340.61 Aligned_cols=278 Identities=19% Similarity=0.189 Sum_probs=232.8
Q ss_pred eeEEeEEEEecCCccccHHHHHHhhCCCcchhhhcccceeEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeec
Q 018515 4 NVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSE 83 (354)
Q Consensus 4 ~v~I~~ig~ylP~~~v~~~el~~~~g~~~~~i~~~~Gi~~r~~~~~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~ 83 (354)
+++|.++|+|+|+++++++++.+.++.+.+++.+++|+++|+++.++++..+|+.+|+++||+++|+++++||.||++|.
T Consensus 1 ~~~I~~i~~~lP~~~~~~~~~~~~~~~~~~~~~~~~Gi~~r~~~~~~~~~~~la~~A~~~al~~ag~~~~~Id~li~~~~ 80 (320)
T cd00830 1 NARILGIGSYLPERVVTNDELEKRLDTSDEWIRTRTGIRERRIADPGETTSDLAVEAAKKALEDAGIDADDIDLIIVATS 80 (320)
T ss_pred CCEEEEEEEECCCcEEcHHHHHHHcCCCHHHhhhccCceEEeeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcC
Confidence 47899999999999999999999999888899899999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeecccccC----CCCCCCc
Q 018515 84 TVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYA----EGPARPT 159 (354)
Q Consensus 84 t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~~~~----~~~~~~~ 159 (354)
++++..|+++.+|+++||+ +++.+++++++|+|++.||..|..++++|. .+++|||++|..+.. +.....+
T Consensus 81 ~~~~~~~~~~~~l~~~lg~---~~~~~~~v~~~C~s~~~al~~A~~~i~~g~--~~~vLvv~~e~~s~~~~~~~~~~~~~ 155 (320)
T cd00830 81 TPDYLFPATACLVQARLGA---KNAAAFDINAACSGFLYGLSTAAGLIRSGG--AKNVLVVGAETLSRILDWTDRSTAVL 155 (320)
T ss_pred CCCCCCCcHHHHHHHHhCC---CCCcEeeccccchHHHHHHHHHHHHHHcCC--CCEEEEEEehhhccccCcccCCceEE
Confidence 9888789999999999999 478999999999999999999999999994 499999999995421 1223578
Q ss_pred ccceeEEEEeccCCC---c-eeeeccccccccccccccccCCCC-----------CccccCCcchHHHHHHHHHHHHHHH
Q 018515 160 GGAAAVVMLVGPDAP---V-AFESKLRGSHMSHAYDFYKPNLAS-----------EYPVVDGKLSQTCYLMALDTCYKCL 224 (354)
Q Consensus 160 ~GDGAaA~ll~~~~~---~-~~~~~~~g~~~~~~~~~~~p~~~~-----------~~~~~dg~~~~~~~~~~~~~~i~~~ 224 (354)
|||||+|+||++++. + .....+++.+.+.. ..|.++. .+..++++..+..+.+.+++.++++
T Consensus 156 ~GDgAaA~ll~~~~~~~~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 232 (320)
T cd00830 156 FGDGAGAVVLEATEEDPGILDSVLGSDGSGADLL---TIPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMPESIEEA 232 (320)
T ss_pred EeccceEEEEEecCCCCcEEEEEEEEcCCCCCeE---EeCCCCcCCccccccccCccEEEcChHHHHHHHHhhHHHHHHH
Confidence 999999999998643 2 23333444332211 1111111 1234566666667778888999999
Q ss_pred HHHhhchhCCCCCccccceecccCCchHHHHHHHHHhhhhhhhhccccchhHhhhccCCCCCCCCCccccchhHHHHHHh
Q 018515 225 CSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQ 304 (354)
Q Consensus 225 l~~~g~~~~~~l~~~Did~~v~HQan~~ii~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (354)
|++++ ++++|||+|++||+|.++++.+.++|++ +.
T Consensus 233 l~~~g------~~~~di~~~~~h~~~~~~~~~~~~~lgl------------------------~~--------------- 267 (320)
T cd00830 233 LEKAG------LTPDDIDWFVPHQANLRIIEAVAKRLGL------------------------PE--------------- 267 (320)
T ss_pred HHHcC------CCHHHCCEEEECCCCHHHHHHHHHHhCC------------------------CH---------------
Confidence 99999 9999999999999999999999999985 43
Q ss_pred hhhhHHHhhcccccccccccCccchHHHHHHHHHHhccCc
Q 018515 305 LAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNKH 344 (354)
Q Consensus 305 ~~~~~~~~k~~~~~~~~~~~GN~~saSip~~L~~~l~~~~ 344 (354)
+|+..+ +++|||++|||+|+.|.+++++++
T Consensus 268 -------~~~~~~---~~~~Gn~~sas~~~~L~~~~~~~~ 297 (320)
T cd00830 268 -------EKVVVN---LDRYGNTSAASIPLALDEAIEEGK 297 (320)
T ss_pred -------HHhhhh---HHhhCcHHHHHHHHHHHHHHHcCC
Confidence 676543 479999999999999999998764
No 21
>PLN03171 chalcone synthase-like protein; Provisional
Probab=100.00 E-value=1.3e-43 Score=350.81 Aligned_cols=281 Identities=17% Similarity=0.204 Sum_probs=206.1
Q ss_pred eeEEeEEEEecCCccccHHHHHHhh-C--CCcc---------hhhhcccceeEeecCCC---------------------
Q 018515 4 NVGILAMDIYFPPTCVQQEALEAHD-G--ASKG---------KYTIGLGQECMAFCSEV--------------------- 50 (354)
Q Consensus 4 ~v~I~~ig~ylP~~~v~~~el~~~~-g--~~~~---------~i~~~~Gi~~r~~~~~~--------------------- 50 (354)
++.|.|+|+|+|+++++|+++.+.+ . ..++ ||.+++||++||++.++
T Consensus 22 ~~~I~gigt~~P~~~v~n~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~~~r~ 101 (399)
T PLN03171 22 LAAVLAIGTANPANCVPQDEFPDFYFRATKSDHLTALKDKFKRICQELGVQKRYLHHTEELLSAHPEFLDHDAPSLDARL 101 (399)
T ss_pred CcEEEEEEeeCCCcccCHHHHHHHHHHHhcccccHHHHHHHHHHHHhcCCCceeEeccccccccCccccccCCCCHHHHH
Confidence 4789999999999999999999873 2 2223 58889999999998766
Q ss_pred ----CCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCe-eEEeecCcChHHHHHHH
Q 018515 51 ----EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDI-EGVDSTNACYGGTAALF 125 (354)
Q Consensus 51 ----e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~-~a~Di~~aC~g~~~aL~ 125 (354)
|++++||++|+++||+++|++++|||+||++|+|+++ .|+++++|+++||+ ++.+ .++++++||+||++||+
T Consensus 102 ~~~~~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~-~P~~a~~v~~~LGl--~~~~~~~~~~~~gC~g~~~aL~ 178 (399)
T PLN03171 102 DIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAH-IPGVDFRLVPLLGL--RPSVRRTMLHLNGCFAGAAALR 178 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCC-CCchHHHHHHHhCC--CcccceeeccCCccHHHHHHHH
Confidence 4899999999999999999999999999999999976 79999999999999 4444 36788889999999999
Q ss_pred HHHHHHHcCCCCCCEEEEEeecccc--cC--CCCC------CCcccceeEEEEeccCCC----ceeeecccccccccccc
Q 018515 126 NCVNWVESSSWDGRYGLVVCTDSAV--YA--EGPA------RPTGGAAAVVMLVGPDAP----VAFESKLRGSHMSHAYD 191 (354)
Q Consensus 126 ~A~~~i~sg~~~~~~vLVV~~e~~~--~~--~~~~------~~~~GDGAaA~ll~~~~~----~~~~~~~~g~~~~~~~~ 191 (354)
+|.+|++++ +.++||||++|.++ +. +.+. ..+|||||+|+||++++. ..+.+......
T Consensus 179 ~A~~li~~~--~~~~vLVv~~e~~s~~~~~~d~~~~~~~v~~~LFGDGAaA~vl~~~~~~~~~~~~~l~~~~~~------ 250 (399)
T PLN03171 179 LAKDLAENN--RGARVLVVAAEITLLLFNGPDEGCFQTLLNQGLFGDGAAAVIVGADADAAERPLFEIVSAAQA------ 250 (399)
T ss_pred HHHHHHHhC--CCCeEEEEEEeccccccCCCCcccHHhhhccccccCccEEEEEecCCCCCCCCceEEEEeeeE------
Confidence 999999999 44999999999964 21 1211 368999999999987531 11111101110
Q ss_pred ccccCCCC--Cccc----cCCcchHHHHHHHHHHHHHHHHHHhhch---hCCCCCccccceecccCCchHHHHHHHHHhh
Q 018515 192 FYKPNLAS--EYPV----VDGKLSQTCYLMALDTCYKCLCSKYEKL---EGKQFSLSNADYFVFHSPYNKLVQKSFARLL 262 (354)
Q Consensus 192 ~~~p~~~~--~~~~----~dg~~~~~~~~~~~~~~i~~~l~~~g~~---~~~~l~~~Did~~v~HQan~~ii~~~~~~l~ 262 (354)
..|.... .+.. +++.+..+..-+.+.+.+++++++.... ...+++.+|++|+ +||+|.+|++.+.++|+
T Consensus 251 -~~p~~~~~~~~~~~~~g~~~~~~~~~vp~~i~~~l~~~l~~~l~~~~~~~~g~~~~di~~~-~Hq~~~~il~~v~~~Lg 328 (399)
T PLN03171 251 -IIPESDDAINMHFTEGGLDGNIGTRQVPGLIGDNIERCLLDAFAPLLGGDGGAEWNDLFWA-VHPGSSAILDQVDAALG 328 (399)
T ss_pred -EecCCchheEEEEEcCCceEEECchhHHHHHHHHHHHHHHHHHHhhcccccCCCcccceEE-EcCCcHHHHHHHHHHcC
Confidence 0111000 0001 1222222222233333345555442100 0012778999877 59999999999999998
Q ss_pred hhhhhhccccchhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhHHHhhcccccccccccCccchHHHHHHHHHHhcc
Q 018515 263 FNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHN 342 (354)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~GN~~saSip~~L~~~l~~ 342 (354)
+ ++ +|+..|..++++||||||||||++|.+++++
T Consensus 329 l------------------------~~----------------------ek~~~s~~~l~~yGNtssaSip~~L~~~~~~ 362 (399)
T PLN03171 329 L------------------------EP----------------------EKLAASRRVLSDYGNMFGATVIFALDELRRQ 362 (399)
T ss_pred C------------------------CH----------------------HHhHHHHHHHHHhCcchhhhHHHHHHHHHhh
Confidence 5 44 8887765667899999999999999999866
Q ss_pred C
Q 018515 343 K 343 (354)
Q Consensus 343 ~ 343 (354)
+
T Consensus 363 ~ 363 (399)
T PLN03171 363 M 363 (399)
T ss_pred H
Confidence 4
No 22
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=100.00 E-value=1.3e-42 Score=334.03 Aligned_cols=278 Identities=19% Similarity=0.211 Sum_probs=232.6
Q ss_pred ceeEEeEEEEecCCccccHHHHHHhhCCCcchhhhcccceeEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEee
Q 018515 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGS 82 (354)
Q Consensus 3 ~~v~I~~ig~ylP~~~v~~~el~~~~g~~~~~i~~~~Gi~~r~~~~~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT 82 (354)
|.++|.++|+|+|+++++++++.+.++.++.++..++|+++|+++.+++++.+|+.+|+++||+++|+++++||.||+++
T Consensus 1 ~~~~I~~i~~~~P~~~~~~~~~~~~~~~~~~~i~~~~gi~~r~~~~~~~~~~~la~~A~~~al~~agl~~~~Id~~i~~~ 80 (318)
T TIGR00747 1 MYAGILGTGSYLPEKVLTNADLEKMVDTSDEWIVTRTGIKERRIAADDETSSTMGFEAAKRAIENAGISKDDIDLIIVAT 80 (318)
T ss_pred CCCEEEEEEEECCCceecHHHHHHhcCCchHHeecccCceEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEC
Confidence 46899999999999999999999998887778888899999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeecccc-c---CCCCCCC
Q 018515 83 ETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-Y---AEGPARP 158 (354)
Q Consensus 83 ~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~~-~---~~~~~~~ 158 (354)
.++++..|+.+.++++.||+ +++++|+++++|+|++.||..|..+|++|.+ +++|||++|..+ . .+.....
T Consensus 81 ~~~~~~~~~~a~~l~~~lGl---~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~--~~~Lvv~~e~~~~~~~~~~~~~~~ 155 (318)
T TIGR00747 81 TTPDHAFPSAACMVQAYLGI---KGIPAFDLSAACAGFIYALSVAKQYIESGKY--KTVLVVGAEKLSSTLDWTDRGTCV 155 (318)
T ss_pred CCCCCCCChHHHHHHHHhCC---CCCcEeehhhhhHHHHHHHHHHHHHHHcCCC--CEEEEEEehhhcCcCCcCCCCeEE
Confidence 98888789999999999999 4688999999999999999999999999954 999999999853 2 1112246
Q ss_pred cccceeEEEEeccCCC---c-eeeeccccccccccccccccCC------CCCccccCCcchHHHHHHHHHHHHHHHHHHh
Q 018515 159 TGGAAAVVMLVGPDAP---V-AFESKLRGSHMSHAYDFYKPNL------ASEYPVVDGKLSQTCYLMALDTCYKCLCSKY 228 (354)
Q Consensus 159 ~~GDGAaA~ll~~~~~---~-~~~~~~~g~~~~~~~~~~~p~~------~~~~~~~dg~~~~~~~~~~~~~~i~~~l~~~ 228 (354)
+|||||+|+||++++. + .+...+++.+.+.. ..|.+ ...+..+++...++.+.+.+.++++++++++
T Consensus 156 ~~GDGAaA~lL~~~~~~~~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 232 (318)
T TIGR00747 156 LFGDGAGAVVLGESEDPGGIISTHLGADGTQGEAL---YLPAGGRPTSGPSPFITMEGNEVFKHAVRKMGDVVEETLEAN 232 (318)
T ss_pred EEecceeEEEEeecCCCCcEEEEEEEEcCCCcceE---EECCCCcCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHc
Confidence 7999999999997642 2 23444455544322 12221 1223345566666777788889999999999
Q ss_pred hchhCCCCCccccceecccCCchHHHHHHHHHhhhhhhhhccccchhHhhhccCCCCCCCCCccccchhHHHHHHhhhhh
Q 018515 229 EKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKP 308 (354)
Q Consensus 229 g~~~~~~l~~~Did~~v~HQan~~ii~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (354)
+ ++++|||||+|||+|.++++.+.++|++ +.
T Consensus 233 g------~~~~di~~~~~h~~~~~~~~~~~~~lgi------------------------~~------------------- 263 (318)
T TIGR00747 233 G------LDPEDIDWFVPHQANLRIIEALAKRLEL------------------------DM------------------- 263 (318)
T ss_pred C------CCHHHCCEEEECCCCHHHHHHHHHHcCC------------------------CH-------------------
Confidence 9 9999999999999999999999999985 43
Q ss_pred HHHhhcccccccccccCccchHHHHHHHHHHhccC
Q 018515 309 LYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNK 343 (354)
Q Consensus 309 ~~~~k~~~~~~~~~~~GN~~saSip~~L~~~l~~~ 343 (354)
+|+..++ ++|||++|||+|+.|+++++++
T Consensus 264 ---~k~~~~~---~~~Gn~~sas~~~~L~~~~~~~ 292 (318)
T TIGR00747 264 ---SQVVKTV---HKYGNTSAASIPLALDELLRTG 292 (318)
T ss_pred ---HHeeehH---hhhCCHHHHHHHHHHHHHHHcC
Confidence 7777554 7899999999999999999864
No 23
>PLN03168 chalcone synthase; Provisional
Probab=100.00 E-value=2.3e-42 Score=340.84 Aligned_cols=275 Identities=16% Similarity=0.163 Sum_probs=205.7
Q ss_pred eeEEeEEEEecCCccccHHHHHHhhC-C-----Cc---ch---hhhcccceeEeecCCC---------------------
Q 018515 4 NVGILAMDIYFPPTCVQQEALEAHDG-A-----SK---GK---YTIGLGQECMAFCSEV--------------------- 50 (354)
Q Consensus 4 ~v~I~~ig~ylP~~~v~~~el~~~~g-~-----~~---~~---i~~~~Gi~~r~~~~~~--------------------- 50 (354)
.+.|.++|+.+|+++++++++.++.. . .+ ++ +-+++||++|++.-+.
T Consensus 15 ~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~ps~~~r~ 94 (389)
T PLN03168 15 PACVLGIGTAVPPAEFLQSEYPDFFFNITNCGEKEALKAKFKRICDKSGIRKRHMFLTEEVLKANPGICTYMEPSLNVRH 94 (389)
T ss_pred CeEEEEEeccCCCcccCHHHHHHHHHHhccccCcHHHHHHHHHHHHhcCCCeeeeeccccchhhCcccccccCCCHHHHH
Confidence 36799999999999999999887652 1 11 11 3357999999985421
Q ss_pred ----CCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCe-eEEeecCcChHHHHHHH
Q 018515 51 ----EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDI-EGVDSTNACYGGTAALF 125 (354)
Q Consensus 51 ----e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~-~a~Di~~aC~g~~~aL~ 125 (354)
+.+.+||++|+++||+++|++++|||+||++|+|+ +..|+++++|+++||+ ++.+ .+||++.||+||++||.
T Consensus 95 ~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg-~~~Ps~a~~l~~~LGl--~~~~~r~~d~~~gC~g~~~aL~ 171 (389)
T PLN03168 95 DIVVVQVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSG-VNMPGADHALAKLLGL--KPTVKRVMMYQTGCFGGASVLR 171 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCC-CCCccHHHHHHHHhCc--CCcceeeeeeCCccHHHHHHHH
Confidence 15678999999999999999999999999999998 4589999999999999 4554 48999999999999999
Q ss_pred HHHHHHHcCCCCCCEEEEEeecccc--cCCC--------CCCCcccceeEEEEeccCCC-----ceeeeccccccccccc
Q 018515 126 NCVNWVESSSWDGRYGLVVCTDSAV--YAEG--------PARPTGGAAAVVMLVGPDAP-----VAFESKLRGSHMSHAY 190 (354)
Q Consensus 126 ~A~~~i~sg~~~~~~vLVV~~e~~~--~~~~--------~~~~~~GDGAaA~ll~~~~~-----~~~~~~~~g~~~~~~~ 190 (354)
+|..+++++ +.++||||++|.++ +.+. .+..+|||||+|+||++++. ..+.....++.
T Consensus 172 ~A~~~i~~~--~~~~VLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvvl~~~~~~~~~~~~~~~~~~~~~----- 244 (389)
T PLN03168 172 VAKDLAENN--KGARVLAVASEVTAVTYRAPSENHLDGLVGSALFGDGAGVYVVGSDPKPEVEKALFEVHWAGET----- 244 (389)
T ss_pred HHHHHHHhC--CCCEEEEEEEehhhhhccCcccccHHHHhccccccCccEEEEEecCCCCccCCcceEEEeeeeE-----
Confidence 999999999 55999999999964 3211 13578999999999987531 01111111110
Q ss_pred cccccCC-C-CCccccCC-------cchHHHHHHHHHHHHHHHHHHhhchhCCCCCccccceecccCCchHHHHHHHHHh
Q 018515 191 DFYKPNL-A-SEYPVVDG-------KLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARL 261 (354)
Q Consensus 191 ~~~~p~~-~-~~~~~~dg-------~~~~~~~~~~~~~~i~~~l~~~g~~~~~~l~~~Did~~v~HQan~~ii~~~~~~l 261 (354)
..|.. + ..+...+. +.......+.+.+.++++++..+ +...|+++|++||+|.+|++.+.++|
T Consensus 245 --~~p~s~~~~~~~~~~~g~~~~l~~~vp~~i~~~~~~~l~~~l~~~~------~~~~d~~~~v~Hqgg~~Il~~v~~~L 316 (389)
T PLN03168 245 --ILPESDGAIDGHLTEAGLIFHLMKDVPGLISKNIEKFLNEARKCVG------SPDWNEMFWAVHPGGPAILDQVEAKL 316 (389)
T ss_pred --EEcCCCCccCceEecCceEEEECHHHHHHHHHHHHHHHHHHHHhcC------CCccccceEEecCCcHHHHHHHHHHc
Confidence 11110 0 00001111 11222344555666677777666 66678899999999999999999999
Q ss_pred hhhhhhhccccchhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhHHHhhcccccccccccCccchHHHHHHHHHHhc
Q 018515 262 LFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIH 341 (354)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~GN~~saSip~~L~~~l~ 341 (354)
++ ++ +|+..|..++++||||||||||++|.++++
T Consensus 317 gl------------------------~~----------------------ek~~~s~~vl~~yGNtSSaSv~~vL~~~~~ 350 (389)
T PLN03168 317 KL------------------------TK----------------------DKMQGSRDILSEFGNMSSASVLFVLDQIRQ 350 (389)
T ss_pred CC------------------------CH----------------------HHHHHHHHHHHHhCccHhhhHHHHHHHHHH
Confidence 85 44 888877777899999999999999999885
Q ss_pred c
Q 018515 342 N 342 (354)
Q Consensus 342 ~ 342 (354)
+
T Consensus 351 ~ 351 (389)
T PLN03168 351 R 351 (389)
T ss_pred H
Confidence 3
No 24
>PLN03172 chalcone synthase family protein; Provisional
Probab=100.00 E-value=7.4e-42 Score=337.29 Aligned_cols=273 Identities=15% Similarity=0.186 Sum_probs=209.9
Q ss_pred eEEeEEEEecCCccccHHHHHHhhC-------CCc-----chhhhcccceeEeecCC----C------------------
Q 018515 5 VGILAMDIYFPPTCVQQEALEAHDG-------ASK-----GKYTIGLGQECMAFCSE----V------------------ 50 (354)
Q Consensus 5 v~I~~ig~ylP~~~v~~~el~~~~g-------~~~-----~~i~~~~Gi~~r~~~~~----~------------------ 50 (354)
+.|.|+|+++|+++++|+|+.+++. .+. .++.+++||++|++..+ +
T Consensus 17 ~~I~~igta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r~~ 96 (393)
T PLN03172 17 ATILAIGKATPANCVSQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYMAPSLDARQD 96 (393)
T ss_pred eEEEEEEecCCCccccHHHHHHHHHHHhcccCchHHHHHHHHHHHhcCCCceeEeccchhhhhCccccccCCCCHHHHHH
Confidence 6799999999999999999887652 111 11335799999998541 0
Q ss_pred ---CCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeE-EeecCcChHHHHHHHH
Q 018515 51 ---EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEG-VDSTNACYGGTAALFN 126 (354)
Q Consensus 51 ---e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a-~Di~~aC~g~~~aL~~ 126 (354)
+.+.+||++|+++||+++|++++|||+||++|+|+.+ .|+++++|+++||+ ++.+.+ +|++.||+||++||.+
T Consensus 97 ~~~~~a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~-~P~~a~~l~~~LGl--~~~~~~~~~~~~gC~g~~~aL~~ 173 (393)
T PLN03172 97 MVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVD-MPGADYQLTKLLGL--KPSVKRFMMYQQGCFAGGTVLRL 173 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCc-CchHHHHHHHHhCC--CCCceEEeeeCCchHHHHHHHHH
Confidence 1244899999999999999999999999999999865 89999999999999 566655 7889999999999999
Q ss_pred HHHHHHcCCCCCCEEEEEeecccc--cCC--CC------CCCcccceeEEEEeccCCC--c---eeee---------ccc
Q 018515 127 CVNWVESSSWDGRYGLVVCTDSAV--YAE--GP------ARPTGGAAAVVMLVGPDAP--V---AFES---------KLR 182 (354)
Q Consensus 127 A~~~i~sg~~~~~~vLVV~~e~~~--~~~--~~------~~~~~GDGAaA~ll~~~~~--~---~~~~---------~~~ 182 (354)
|..+++++ +.++||||++|.++ +.+ +. +..+|||||+|+||++++. . .++. +++
T Consensus 174 A~~~~~~~--~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvVl~~~~~~~~~~~~~~i~~~~~~~~~~t~ 251 (393)
T PLN03172 174 AKDLAENN--AGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKIERPLFEIVSAAQTILPDSD 251 (393)
T ss_pred HHHHHHcC--CCCeEEEEEEehhhhhhcccccccHHhhhccchhcCceEEEEEecCCCCcccCceeEEeeeccEEecCCc
Confidence 99999999 55999999999975 321 11 2478999999999987531 1 0111 111
Q ss_pred cccccccccccccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHhhchhCCCCCccccceecccCCchHHHHHHHHHhh
Q 018515 183 GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLL 262 (354)
Q Consensus 183 g~~~~~~~~~~~p~~~~~~~~~dg~~~~~~~~~~~~~~i~~~l~~~g~~~~~~l~~~Did~~v~HQan~~ii~~~~~~l~ 262 (354)
+.....+ ... |..+ .+. +.......+.+++.++++|++.+ ++..|||+|++||+|.+|++.+.++|+
T Consensus 252 ~~~~~~i----~~~-G~~~-~l~-~~vp~~~~~~i~~~~~~~L~~~g------l~~~di~~~~~Hqgg~~Il~~v~~~Lg 318 (393)
T PLN03172 252 GAIDGHL----REV-GLTF-HLL-KDVPGLISKNIEKSLVEAFAPIG------INDWNSIFWIAHPGGPAILDQVEIKLD 318 (393)
T ss_pred ccccceE----EcC-CcEE-EEe-chHHHHHHHHHHHHHHHHhhhcC------CCccccceEEecCCcHHHHHHHHHHcC
Confidence 1111000 000 1110 111 33344566778888999999988 889999999999999999999999999
Q ss_pred hhhhhhccccchhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhHHHhhcccccccccccCccchHHHHHHHHHHhc
Q 018515 263 FNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIH 341 (354)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~GN~~saSip~~L~~~l~ 341 (354)
+ ++ +|+..+..++++||||||||||++|.++++
T Consensus 319 l------------------------~~----------------------~~~~~s~~vl~~yGNtSSaSv~~vL~~~~~ 351 (393)
T PLN03172 319 L------------------------KE----------------------EKLRATRHVLSDYGNMSSACVLFILDEMRK 351 (393)
T ss_pred C------------------------CH----------------------HHHHHHHHHHHHhCccHHhHHHHHHHHHHh
Confidence 5 43 888888777899999999999999999874
No 25
>PLN03173 chalcone synthase; Provisional
Probab=100.00 E-value=1.6e-41 Score=334.74 Aligned_cols=273 Identities=16% Similarity=0.189 Sum_probs=211.0
Q ss_pred eEEeEEEEecCCccccHHHHHHhhC------CCc--c----hhhhcccceeEeecCCC----------------------
Q 018515 5 VGILAMDIYFPPTCVQQEALEAHDG------ASK--G----KYTIGLGQECMAFCSEV---------------------- 50 (354)
Q Consensus 5 v~I~~ig~ylP~~~v~~~el~~~~g------~~~--~----~i~~~~Gi~~r~~~~~~---------------------- 50 (354)
+.|.++|+.+|+++++++++.++.. ..+ . ++-+++||++|++.-+.
T Consensus 17 ~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r~~ 96 (391)
T PLN03173 17 ATIMAIGTSTPPNCVDQSTYPDYYFRITNSEHKVELKEKFKRMCEKSMIKKRYMHLTEEILKENPSVCEYMAPSLDARQD 96 (391)
T ss_pred eEEEEEEccCCCcccCHHHHHHHHHHHhccccchhHHHHHHHHHHhCCCCeeeEeccchhhhhCcccccccCCCHHHHHH
Confidence 6799999999999999999887652 111 1 12357999999875411
Q ss_pred ---CCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCee-EEeecCcChHHHHHHHH
Q 018515 51 ---EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIE-GVDSTNACYGGTAALFN 126 (354)
Q Consensus 51 ---e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~-a~Di~~aC~g~~~aL~~ 126 (354)
+.+.+||++|+++||+++|++++|||+||++|+|+.. .|+++++|+++||+ ++.+. ++|++.||+||++||.+
T Consensus 97 ~~~~~a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~-~P~~a~~l~~~LGl--~~~~~~~~~~~~gC~g~~~aL~~ 173 (391)
T PLN03173 97 MVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVD-MPGADYQLTKLLGL--RSSVKRFMMYQQGCFAGGTVLRL 173 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCc-ccHHHHHHHHHhCC--CccceeeehhcCccHHHHHHHHH
Confidence 1345899999999999999999999999999999865 79999999999999 55564 67889999999999999
Q ss_pred HHHHHHcCCCCCCEEEEEeecccc--cCC-C-C------CCCcccceeEEEEeccCCC--c---eeee---------ccc
Q 018515 127 CVNWVESSSWDGRYGLVVCTDSAV--YAE-G-P------ARPTGGAAAVVMLVGPDAP--V---AFES---------KLR 182 (354)
Q Consensus 127 A~~~i~sg~~~~~~vLVV~~e~~~--~~~-~-~------~~~~~GDGAaA~ll~~~~~--~---~~~~---------~~~ 182 (354)
|.++++++ +.++||||++|.++ +.+ . . ...+|||||+|+||+.++. + .+.+ +++
T Consensus 174 A~~~~~~~--~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvvl~~~~~~~~~~~~~~l~~~~~~~~~~t~ 251 (391)
T PLN03173 174 AKDLAENN--KGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGSDPVLGVEKPLFELVSAAQTILPDSD 251 (391)
T ss_pred HHHHHHhC--CCCeEEEEEEehhhhhhCCccccchhhhhhhhhhcCceEEEEEeCCCCCCcCCcceEEEeeeeEEecCCc
Confidence 99999999 56999999999965 322 1 1 2478999999999987431 1 0111 111
Q ss_pred cccccccccccccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHhhchhCCCCCccccceecccCCchHHHHHHHHHhh
Q 018515 183 GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLL 262 (354)
Q Consensus 183 g~~~~~~~~~~~p~~~~~~~~~dg~~~~~~~~~~~~~~i~~~l~~~g~~~~~~l~~~Did~~v~HQan~~ii~~~~~~l~ 262 (354)
+.+...+ ... |.. ..+. +...+...+.+++.++++|++++ ++.+|||+|++||+|.+|++.+.++|+
T Consensus 252 ~~~~~~i----~~~-G~~-~~l~-~~vp~~~~~~~~~~i~~~L~~~g------l~~~di~~~v~Hqgg~~Il~~v~~~Lg 318 (391)
T PLN03173 252 GAIDGHL----REV-GLT-FHLL-KDVPGLISKNVEKSLTEAFKPLG------ISDWNSLFWIAHPGGPAILDQVEAKLA 318 (391)
T ss_pred cceeeEE----EcC-ceE-EEEe-cHHHHHHHHHHHHHHHHHHHhcC------CCccccCeEEECCCcHHHHHHHHHHcC
Confidence 2111100 111 111 0111 33344566778899999999998 999999999999999999999999998
Q ss_pred hhhhhhccccchhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhHHHhhcccccccccccCccchHHHHHHHHHHhc
Q 018515 263 FNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIH 341 (354)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~GN~~saSip~~L~~~l~ 341 (354)
+ ++ +|+..++.++++||||||||||++|.++++
T Consensus 319 L------------------------~~----------------------ekl~~s~~vl~~yGNtSSaSv~~vL~~~~~ 351 (391)
T PLN03173 319 L------------------------KP----------------------EKLRATRHVLSEYGNMSSACVLFILDEMRK 351 (391)
T ss_pred C------------------------Ch----------------------HHHHHHHHHHHHhCcchhhHHHHHHHHHHH
Confidence 5 44 888887777899999999999999999995
No 26
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=8.2e-41 Score=321.39 Aligned_cols=278 Identities=19% Similarity=0.194 Sum_probs=232.1
Q ss_pred ceeEEeEEEEecCCccccHHHHHHhhCCCcchhhhcccceeEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEee
Q 018515 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGS 82 (354)
Q Consensus 3 ~~v~I~~ig~ylP~~~v~~~el~~~~g~~~~~i~~~~Gi~~r~~~~~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT 82 (354)
+.++|.++|+|+|+++++++++.+..+...+++..++|+++|+++.++++..+|+.+|+++||+++|+++++||.||++|
T Consensus 2 ~~v~I~ai~~~lP~~~~~~~~~~~~~~~~~~~i~~~~gi~~r~~~~~~~~~~~la~~A~~~al~~agl~~~~id~vi~~~ 81 (319)
T PRK09352 2 MYAKILGTGSYLPERVVTNDDLEKMVDTSDEWIVTRTGIKERRIAAPDETTSDLATEAAKKALEAAGIDPEDIDLIIVAT 81 (319)
T ss_pred CceEEEEEEEECCCeEEcHHHHHHHcCCCHHHhhhhcCeEEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEc
Confidence 46899999999999999999999999887788888899999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeecccccC--C--CCCCC
Q 018515 83 ETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYA--E--GPARP 158 (354)
Q Consensus 83 ~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~~~~--~--~~~~~ 158 (354)
.++++..|+.+..|+.+||+ .++++++++++|++++.||..|.++|++|.+ ++|||+++|..+.. . .....
T Consensus 82 ~~~~~~~~~~~~~i~~~lG~---~~~~~~~v~~~Casg~~al~~A~~~i~~g~~--~~vLvv~~e~~s~~~~~~~~~~~~ 156 (319)
T PRK09352 82 TTPDYAFPSTACLVQARLGA---KNAAAFDLSAACSGFVYALSTADQFIRSGAY--KNVLVIGAEKLSRIVDWTDRSTCV 156 (319)
T ss_pred CCCCCCCchHHHHHHHHhCC---CCCcEeeccccchhHHHHHHHHHHHHHcCCC--CEEEEEEehhhccccCcccCCceE
Confidence 98887788999999999999 5788999999999999999999999999954 99999999985321 1 12246
Q ss_pred cccceeEEEEeccCC--Cc-eeeeccccccccccccccccCCCCC------ccccCCcchHHHHHHHHHHHHHHHHHHhh
Q 018515 159 TGGAAAVVMLVGPDA--PV-AFESKLRGSHMSHAYDFYKPNLASE------YPVVDGKLSQTCYLMALDTCYKCLCSKYE 229 (354)
Q Consensus 159 ~~GDGAaA~ll~~~~--~~-~~~~~~~g~~~~~~~~~~~p~~~~~------~~~~dg~~~~~~~~~~~~~~i~~~l~~~g 229 (354)
+|||||+|+||++++ .+ .++..++|.+.+. +..|..+.. +..++++..++.+.+.+.++++++|++++
T Consensus 157 ~~gDGaaA~ll~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g 233 (319)
T PRK09352 157 LFGDGAGAVVLGASEEPGILSTHLGSDGSYGDL---LYLPGGGSRGPASPGYLRMEGREVFKFAVRELAKVAREALEAAG 233 (319)
T ss_pred EEeccceEEEEEEcCCCCeEEEEEEEcCCCCCe---EEeCCCCCCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 899999999999864 22 3444455554331 122332211 22356666666777788899999999999
Q ss_pred chhCCCCCccccceecccCCchHHHHHHHHHhhhhhhhhccccchhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhH
Q 018515 230 KLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPL 309 (354)
Q Consensus 230 ~~~~~~l~~~Did~~v~HQan~~ii~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (354)
++++|||||++||+|.++++.+.++|++ +.
T Consensus 234 ------~~~~di~~~~~h~~~~~~~~~~~~~lg~------------------------~~-------------------- 263 (319)
T PRK09352 234 ------LTPEDIDWLVPHQANLRIIDATAKKLGL------------------------PM-------------------- 263 (319)
T ss_pred ------CCHHHCCEEEECCCCHHHHHHHHHHhCC------------------------CH--------------------
Confidence 9999999999999999999999999985 43
Q ss_pred HHhhcccccccccccCccchHHHHHHHHHHhccC
Q 018515 310 YDAKVQPSTLIPKQVGNMYTASLYAALASLIHNK 343 (354)
Q Consensus 310 ~~~k~~~~~~~~~~~GN~~saSip~~L~~~l~~~ 343 (354)
+|+..+ +.+|||+++|++|+.|+++++++
T Consensus 264 --~~~~~~---~~~~Gn~~~a~~~~~L~~~~~~g 292 (319)
T PRK09352 264 --EKVVVT---VDKYGNTSAASIPLALDEAVRDG 292 (319)
T ss_pred --HHhhhh---HHhhCCHHHHHHHHHHHHHHHcC
Confidence 666444 37999999999999999999875
No 27
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=4.8e-41 Score=330.28 Aligned_cols=278 Identities=15% Similarity=0.106 Sum_probs=215.3
Q ss_pred eeEEeEEEEecCCccccHHHHHHhhC------------------------CCcchhhhcccceeEeecCCC---------
Q 018515 4 NVGILAMDIYFPPTCVQQEALEAHDG------------------------ASKGKYTIGLGQECMAFCSEV--------- 50 (354)
Q Consensus 4 ~v~I~~ig~ylP~~~v~~~el~~~~g------------------------~~~~~i~~~~Gi~~r~~~~~~--------- 50 (354)
+++|.|+|+|+|+++++|+|+.+.++ .+.+||.+.+||++|+++.++
T Consensus 2 ~~~I~~~g~~lP~~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~ 81 (372)
T PRK07515 2 NVVISGTGLYTPPESISNEELVASFNAYVERFNAENAAAIAAGEVEALQPSSSEFIEKASGIKSRYVMDKEGILDPDRMR 81 (372)
T ss_pred CcEEEEEEeecCCccccHHHHHHHHhhhhhhhcccchhhhccccccccCCCCHHHhhhccCCceEEEecccccCcccccC
Confidence 68999999999999999999987642 235678888999999997531
Q ss_pred ---------C--CHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChH
Q 018515 51 ---------E--DVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYG 119 (354)
Q Consensus 51 ---------e--~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g 119 (354)
+ +..+|+++|+++||+++|+++++||.||++|+++++..|+++..|++.||+ + +.++|++.+|+|
T Consensus 82 ~~~~~r~~~~~~~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl--~--~~~~~v~~aCas 157 (372)
T PRK07515 82 PRIPERSNDELSIQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGI--E--GFAFDMNVACSS 157 (372)
T ss_pred cccccccccchhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCC--C--CcEEEecchhHH
Confidence 1 346899999999999999999999999999988888889999999999999 2 578999999999
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEEeecccc-cC---CCCCCCcccceeEEEEeccCCC--------c-eeeeccccccc
Q 018515 120 GTAALFNCVNWVESSSWDGRYGLVVCTDSAV-YA---EGPARPTGGAAAVVMLVGPDAP--------V-AFESKLRGSHM 186 (354)
Q Consensus 120 ~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~~-~~---~~~~~~~~GDGAaA~ll~~~~~--------~-~~~~~~~g~~~ 186 (354)
+++||.+|.++|++|.+ ++||||++|.++ +. +....++|||||+|+||++.+. + .....+. +.
T Consensus 158 g~~al~~A~~~i~~g~~--~~vLvv~~e~~s~~~~~~d~~~~~lfGDgAaA~vL~~~~~~~~~~~~~il~~~~~~~--~~ 233 (372)
T PRK07515 158 ATFGIQTAANAIRSGSA--RRVLVVNPEICSGHLNFRDRDSHFIFGDVATAVIVERADTATSAGGFEILGTRLFTQ--FS 233 (372)
T ss_pred HHHHHHHHHHHHHcCCC--CEEEEEeeecccccccccCCCCCEEecCccEEEEEeeccccccCCCceEEEEEeecc--cc
Confidence 99999999999999954 999999999954 22 2224588999999999987531 1 1111111 11
Q ss_pred ccc---cccc---ccC---CCCCccccCCcchHHHHHHHHHHHHHHHHHHhhchhCCCCCccccceecccCCchHHHHHH
Q 018515 187 SHA---YDFY---KPN---LASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKS 257 (354)
Q Consensus 187 ~~~---~~~~---~p~---~~~~~~~~dg~~~~~~~~~~~~~~i~~~l~~~g~~~~~~l~~~Did~~v~HQan~~ii~~~ 257 (354)
+.+ .++. .+. ....+..|+|...++.+.+.++++++++|++++ ++++|||+|++||+|.++++.+
T Consensus 234 ~~~~~~~G~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~g------l~~~dId~~~~Hq~~~~~~d~~ 307 (372)
T PRK07515 234 NNIRNNFGFLNRADPEGIGARDKLFVQEGRKVFKEVCPMVAEHIVEHLAENG------LTPADVKRFWLHQANINMNQLI 307 (372)
T ss_pred cceecCCCCCCCCCccccccccceEEeccHHHHHHHHHHHHHHHHHHHHHcC------CCHHHCCEEEECCCCHHHHHHH
Confidence 110 0000 010 001122357776677788888999999999999 9999999999999999999999
Q ss_pred HHHh-hhhhhhhccccchhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhHHHhhcccccccccccCccchHHHHHHH
Q 018515 258 FARL-LFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAAL 336 (354)
Q Consensus 258 ~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~GN~~saSip~~L 336 (354)
.+++ ++. ++. +|.... +++||||+|||||++|
T Consensus 308 ~~~llg~~----------------------~~~----------------------~~~~~~---~~~~GNt~sasi~~~L 340 (372)
T PRK07515 308 GKKVLGRD----------------------ATP----------------------EEAPVI---LDEYANTSSAGSIIAF 340 (372)
T ss_pred HHHhccCC----------------------CCh----------------------hhceEe---HHhcCCchhhHHHHHH
Confidence 9884 531 122 554433 4899999999999999
Q ss_pred HHHhcc
Q 018515 337 ASLIHN 342 (354)
Q Consensus 337 ~~~l~~ 342 (354)
++++++
T Consensus 341 ~~~~~~ 346 (372)
T PRK07515 341 HKHSDD 346 (372)
T ss_pred HHHhcc
Confidence 998654
No 28
>PLN03170 chalcone synthase; Provisional
Probab=100.00 E-value=2.7e-41 Score=334.30 Aligned_cols=273 Identities=15% Similarity=0.190 Sum_probs=210.7
Q ss_pred eEEeEEEEecCCccccHHHHHHhhC-------CCc-c-h---hhhcccceeEeecCCC----------------------
Q 018515 5 VGILAMDIYFPPTCVQQEALEAHDG-------ASK-G-K---YTIGLGQECMAFCSEV---------------------- 50 (354)
Q Consensus 5 v~I~~ig~ylP~~~v~~~el~~~~g-------~~~-~-~---i~~~~Gi~~r~~~~~~---------------------- 50 (354)
..|.++|+.+|+++++++++.+++. .+. + + +-+++||++|++..++
T Consensus 21 ~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r~~ 100 (401)
T PLN03170 21 ATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLDARQD 100 (401)
T ss_pred eEEEEEeecCCCccccHHHHHHHHHHHccccCchhHHHHHHHHHHhCCCCceeEeccccchhhCccccccCCCCHHHHHH
Confidence 6799999999999999999887652 111 1 1 2257999999885411
Q ss_pred ---CCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCe-eEEeecCcChHHHHHHHH
Q 018515 51 ---EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDI-EGVDSTNACYGGTAALFN 126 (354)
Q Consensus 51 ---e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~-~a~Di~~aC~g~~~aL~~ 126 (354)
+.+.+||++|+++||+++|++++|||+||++|+|+.+ .|+++++|+++||+ ++.+ .+||++.||+||++||.+
T Consensus 101 ~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~-~Ps~a~~l~~~LGl--~~~~~r~~d~~~gC~G~~~aL~~ 177 (401)
T PLN03170 101 IVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVD-MPGADYQLTKMLGL--RPSVNRLMMYQQGCFAGGTVLRV 177 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCC-CChHHHHHHHHhCc--CcccHHHHhhcChhHHHHHHHHH
Confidence 1345699999999999999999999999999999855 89999999999999 5554 489999999999999999
Q ss_pred HHHHHHcCCCCCCEEEEEeecccc--c-CCC-----C--CCCcccceeEEEEeccCCC--c---eeeecccccccccccc
Q 018515 127 CVNWVESSSWDGRYGLVVCTDSAV--Y-AEG-----P--ARPTGGAAAVVMLVGPDAP--V---AFESKLRGSHMSHAYD 191 (354)
Q Consensus 127 A~~~i~sg~~~~~~vLVV~~e~~~--~-~~~-----~--~~~~~GDGAaA~ll~~~~~--~---~~~~~~~g~~~~~~~~ 191 (354)
|..+++++ +.++||||++|.++ + .+. + ...+|||||+|+||++++. + .+++..+++..
T Consensus 178 A~~l~~~~--~~~~vLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvVl~~~~~~~~~~~~~~l~~~~~~~----- 250 (401)
T PLN03170 178 AKDLAENN--RGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERVERPLFQLVSASQTI----- 250 (401)
T ss_pred HHHHHHcC--CCCeEEEEEEehhhhccCCcccchhhhhhhhhhhhceeEEEEEecCCcccccCCceEEeeccceE-----
Confidence 99999999 55999999999964 2 111 1 2468999999999987542 1 12222222211
Q ss_pred ccccCCC--CCccc-cCC------cchHHHHHHHHHHHHHHHHHHhhchhCCCCCccccceecccCCchHHHHHHHHHhh
Q 018515 192 FYKPNLA--SEYPV-VDG------KLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLL 262 (354)
Q Consensus 192 ~~~p~~~--~~~~~-~dg------~~~~~~~~~~~~~~i~~~l~~~g~~~~~~l~~~Did~~v~HQan~~ii~~~~~~l~ 262 (354)
.|... ..+.. ++| +.+.....+.+++.++++|++++ ++.+|+|+|++||+|.+|++.+.++|+
T Consensus 251 --~p~~~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~v~~~L~~~g------l~~~di~~~v~Hqgg~~il~~v~~~Lg 322 (401)
T PLN03170 251 --LPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPLG------ITDYNSIFWVAHPGGPAILDQVEAKVG 322 (401)
T ss_pred --ecCCcccccceEEcCCeEEEEehHHHHHHHHHHHHHHHHHHHhcC------CCccccCeEEecCCcHHHHHHHHHHcC
Confidence 12100 00111 122 22334566778889999999998 999999999999999999999999998
Q ss_pred hhhhhhccccchhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhHHHhhcccccccccccCccchHHHHHHHHHHhc
Q 018515 263 FNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIH 341 (354)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~GN~~saSip~~L~~~l~ 341 (354)
+ ++ +|+..++.++++||||||||||++|.++++
T Consensus 323 l------------------------~~----------------------~~~~~s~~~l~~~GNtsSasv~~vL~~~~~ 355 (401)
T PLN03170 323 L------------------------EK----------------------ERMRATRHVLSEYGNMSSACVLFILDEMRK 355 (401)
T ss_pred C------------------------Ch----------------------HHHHHHHHHHHHhCccHHhHHHHHHHHHHH
Confidence 5 44 888777777899999999999999999973
No 29
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=100.00 E-value=9.6e-40 Score=314.09 Aligned_cols=281 Identities=32% Similarity=0.414 Sum_probs=222.8
Q ss_pred eeEEeEEEEecCCccccHHHHHHhhCCCcchhhhcccceeEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeec
Q 018515 4 NVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSE 83 (354)
Q Consensus 4 ~v~I~~ig~ylP~~~v~~~el~~~~g~~~~~i~~~~Gi~~r~~~~~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~ 83 (354)
.++|.++|+|+|+++++|+++.+.++.+ ++...+|+++|++..++++..+|+++|+++||+++|++++|||+||++++
T Consensus 1 ~v~I~~i~~~lP~~~v~~~~~~~~~~~~--~~~~~~gi~~r~~~~~~~~~~~l~~~a~~~aL~~ag~~~~~Id~li~~~~ 78 (324)
T cd00827 1 DVGIEAIGAYLPRYRVDNEELAEGLGVD--PGKYTTGIGQRHMAGDDEDVPTMAVEAARRALERAGIDPDDIGLLIVATE 78 (324)
T ss_pred CccEEEEEecCCceeecHHHHHHHhCCC--cceeeeecceeEecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcC
Confidence 3689999999999999999999988865 67788999999999888999999999999999999999999999999998
Q ss_pred cCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeecccccCC---CCCCCcc
Q 018515 84 TVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAE---GPARPTG 160 (354)
Q Consensus 84 t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~~~~~---~~~~~~~ 160 (354)
++++..|+.+.+|++.||+ +++.+++++++|+|++.||.+|.++|++|.+ +++|||++|.++... ....++|
T Consensus 79 ~~~~~~~~~~~~i~~~lg~---~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~--~~vlvv~~e~~~~~~~~~~~~~~~~ 153 (324)
T cd00827 79 SPIDKGKSAATYLAELLGL---TNAEAFDLKQACYGGTAALQLAANLVESGPW--RYALVVASDIASYLLDEGSALEPTL 153 (324)
T ss_pred CCCCCCccHHHHHHHHcCC---CCCceeehhhhhHHHHHHHHHHHHHHHcCCC--CEEEEEEEHHhhhcccCCCCccccc
Confidence 8877788999999999999 4899999999999999999999999999954 999999999964332 2346889
Q ss_pred cceeEEEEeccCCC-----c-eeeecccccccc---ccccccccCC----CCCccccCC--cchHHHHHHHHHHHHHHHH
Q 018515 161 GAAAVVMLVGPDAP-----V-AFESKLRGSHMS---HAYDFYKPNL----ASEYPVVDG--KLSQTCYLMALDTCYKCLC 225 (354)
Q Consensus 161 GDGAaA~ll~~~~~-----~-~~~~~~~g~~~~---~~~~~~~p~~----~~~~~~~dg--~~~~~~~~~~~~~~i~~~l 225 (354)
||||+|+||++++. + .....+++.+.. ...+...+.+ ......+++ ......+.+.+++.++++|
T Consensus 154 gdgaaA~ll~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 233 (324)
T cd00827 154 GDGAAAMLVSRNPGILAAGIVSTHSTSDPGYDFSPYPVMDGGYPKPCKLAYAIRLTAEPAGRAVFEAAHKLIAKVVRKAL 233 (324)
T ss_pred cCceEEEEEecCcccccCCceeeeeecccccccCccceeccCCCcchhhhhhcceeecCCccchHHHHhHHHHHHHHHHH
Confidence 99999999987642 2 223333333211 0011111100 000112333 2334456677888999999
Q ss_pred HHhhchhCCCCCccccceecccCCch-HHHHHHHHHhhhhhhhhccccchhHhhhccCCCCCCCCCccccchhHHHHHHh
Q 018515 226 SKYEKLEGKQFSLSNADYFVFHSPYN-KLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQ 304 (354)
Q Consensus 226 ~~~g~~~~~~l~~~Did~~v~HQan~-~ii~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (354)
++.+ ++ +|||+|+|||+|. ++++.+.++|++ +.
T Consensus 234 ~~~~------~~-~~i~~~~~h~~~~~~~~~~~~~~l~~------------------------~~--------------- 267 (324)
T cd00827 234 DRAG------LS-EDIDYFVPHQPNGKKILEAVAKKLGG------------------------PP--------------- 267 (324)
T ss_pred HHcc------cc-cccceeeccCchHHHHHHHHHHHccc------------------------hH---------------
Confidence 9988 88 9999999999999 999999999985 22
Q ss_pred hhhhHHHhhccccc-ccccccCccchHHHHHHHHHHhccCc
Q 018515 305 LAKPLYDAKVQPST-LIPKQVGNMYTASLYAALASLIHNKH 344 (354)
Q Consensus 305 ~~~~~~~~k~~~~~-~~~~~~GN~~saSip~~L~~~l~~~~ 344 (354)
+++..+. ..+++||||+|||+|+.|++++++++
T Consensus 268 -------~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~~~ 301 (324)
T cd00827 268 -------EKASQTRWILLRRVGNMYAASILLGLASLLESGK 301 (324)
T ss_pred -------hhhccchhhHHHHhCchHHHHHHHHHHHHHhcCC
Confidence 4444432 13589999999999999999998765
No 30
>PLN02932 3-ketoacyl-CoA synthase
Probab=100.00 E-value=2e-36 Score=302.56 Aligned_cols=281 Identities=18% Similarity=0.239 Sum_probs=200.2
Q ss_pred ceeEEeEEEEecCCc--cccHHHHHHhh------C-CCc---------chhhhcccceeEeecCCCC-------------
Q 018515 3 KNVGILAMDIYFPPT--CVQQEALEAHD------G-ASK---------GKYTIGLGQECMAFCSEVE------------- 51 (354)
Q Consensus 3 ~~v~I~~ig~ylP~~--~v~~~el~~~~------g-~~~---------~~i~~~~Gi~~r~~~~~~e------------- 51 (354)
..++++..+.|.|+. +++.+.+.+.. | .++ +|+.+++||.+|++.++..
T Consensus 66 ~~vyl~d~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~rsGig~~t~~p~~~~~~~~~~~~~~~~ 145 (478)
T PLN02932 66 KPVYLVDFSCYLPPSHLKASIQTIMGHVRRVREAGAWKQESDYLMDFCEKILERSGLGQETYIPEGLQCLPLQQNLAVSR 145 (478)
T ss_pred CcEEEEeeeeecCcccccccHHHHHHHHHhhcccCCCCccchhHHHHHHHHHHHcCCCCceeeccccccCCHHHHHHHHH
Confidence 569999999999876 67777776543 2 111 4566789999998876542
Q ss_pred -CHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeec-CcChHHHHHHHHHHH
Q 018515 52 -DVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST-NACYGGTAALFNCVN 129 (354)
Q Consensus 52 -~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~-~aC~g~~~aL~~A~~ 129 (354)
.+.+|+.+|+++||+++|++|+|||+||++|+|+. ..|+++++|+++||+ ++++.+||++ .||+||++||++|.+
T Consensus 146 ~ea~~la~~Aa~~aL~~agi~p~dId~lIv~tst~~-~~Pslaa~V~~~lGl--r~~i~~fdL~gmGCSggl~aL~lA~~ 222 (478)
T PLN02932 146 KETEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFN-PTPSLSSILVNKFKL--RDNIKSLNLGGMGCSAGVIAIDAAKS 222 (478)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCC-CCCcHHHHHHHHhCC--CCCceEEEeccchhhhHHHHHHHHHH
Confidence 47899999999999999999999999999999986 789999999999999 6689999998 899999999999999
Q ss_pred HHHcCCCCCCEEEEEeecccc----cCCC----CCCCcccceeEEEEeccCC-C-----ce------eeecccccccccc
Q 018515 130 WVESSSWDGRYGLVVCTDSAV----YAEG----PARPTGGAAAVVMLVGPDA-P-----VA------FESKLRGSHMSHA 189 (354)
Q Consensus 130 ~i~sg~~~~~~vLVV~~e~~~----~~~~----~~~~~~GDGAaA~ll~~~~-~-----~~------~~~~~~g~~~~~~ 189 (354)
+++++ +.++||||++|.++ +.++ .+..+|||||+|+||++.+ . .. .+.++++...+.+
T Consensus 223 ll~~~--~~~~aLVVstE~~S~~~~~~d~r~~l~t~~LFgDGAAAvlLs~~~~~~~~~~~~L~~~v~t~~~ad~~~~~~v 300 (478)
T PLN02932 223 LLQVH--RNTYALVVSTENITQNLYLGNNKSMLVTNCLFRIGGAAILLSNRSRDRKRAKYELVHTVRVHTGADDRSYECA 300 (478)
T ss_pred HHHcC--CCCeEEEEEEeecccccCCCcchhhhccceeecccceEEEEecccccccCcceEEEeeeeeeeccCCCccccc
Confidence 99999 55999999999964 2121 1357899999999998643 1 11 1222233222211
Q ss_pred ccccccC---C--C----CCccc-----------cCCcch------HHHHHHHHHHHHHHHHHHhhchhCCCCCc---cc
Q 018515 190 YDFYKPN---L--A----SEYPV-----------VDGKLS------QTCYLMALDTCYKCLCSKYEKLEGKQFSL---SN 240 (354)
Q Consensus 190 ~~~~~p~---~--~----~~~~~-----------~dg~~~------~~~~~~~~~~~i~~~l~~~g~~~~~~l~~---~D 240 (354)
..+. | + +..|. +.|+.. ..+++.... +++++..- . .+.+ ++
T Consensus 301 ---~~~~d~~G~~g~~Lsk~lp~~~~~al~~ni~~~~p~v~p~~e~~~~~~~~~~---~~~~k~~~--~--~~~~~~~~~ 370 (478)
T PLN02932 301 ---TQEEDEDGIVGVSLSKNLPMVAARTLKINIATLGPLVLPLSEKFHFFVRFVK---KKFFNPKL--K--HYIPDFKLA 370 (478)
T ss_pred ---eeecccCCcceeeECccchHHHHHHHhhhhhccccccccchhhhHHHHHHhH---HHHHHHHh--h--cCcHhHHhh
Confidence 1111 0 0 00010 111111 111121111 12222111 0 0322 68
Q ss_pred cceecccCCchHHHHHHHHHhhhhhhhhccccchhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhHHHhhccccccc
Q 018515 241 ADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLI 320 (354)
Q Consensus 241 id~~v~HQan~~ii~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 320 (354)
||||++||+|.+|++.+.++|++ ++ +++.++..+
T Consensus 371 id~f~iHqggr~IIdav~k~LgL------------------------~~----------------------~~~e~s~~t 404 (478)
T PLN02932 371 FEHFCIHAGGRALIDEMEKNLHL------------------------TP----------------------LDVEASRMT 404 (478)
T ss_pred hceEEEccCCHHHHHHHHHHcCC------------------------Ch----------------------HHHHHHHHH
Confidence 99999999999999999999995 33 566566666
Q ss_pred ccccCccchHHHHHHHHHHhccCc
Q 018515 321 PKQVGNMYTASLYAALASLIHNKH 344 (354)
Q Consensus 321 ~~~~GN~~saSip~~L~~~l~~~~ 344 (354)
+++||||||+|||++|+...++++
T Consensus 405 L~rfGNTSSaSI~~~L~~~ea~gr 428 (478)
T PLN02932 405 LHRFGNTSSSSIWYELAYTEAKGR 428 (478)
T ss_pred HHHhCChhhhHHHHHHHHHHHcCC
Confidence 799999999999999999886643
No 31
>PLN02377 3-ketoacyl-CoA synthase
Probab=100.00 E-value=1.7e-35 Score=297.42 Aligned_cols=286 Identities=15% Similarity=0.190 Sum_probs=198.4
Q ss_pred ceeEEeEEEEecCCc--cccHHHHHHhh---C-CCcch------hhhcccceeE-eec------CC-------CCCHHHH
Q 018515 3 KNVGILAMDIYFPPT--CVQQEALEAHD---G-ASKGK------YTIGLGQECM-AFC------SE-------VEDVISM 56 (354)
Q Consensus 3 ~~v~I~~ig~ylP~~--~v~~~el~~~~---g-~~~~~------i~~~~Gi~~r-~~~------~~-------~e~~~~L 56 (354)
..++++..+.|.|+. +++.+.+.+.. | .+++. +.++.|+.+. +++ ++ -+.+.++
T Consensus 96 ~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sgig~~t~~p~~~~~~~~~~~~~~~~~ea~~l 175 (502)
T PLN02377 96 RPVYLVDYSCYRAPDHLKAPFARFMEHSRLTGDFDDSSLEFQRKILERSGLGEDTYVPEAMHYIPPRPSMAAAREEAEQV 175 (502)
T ss_pred CCEEEEeeeeecCCccccccHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCCCccccCchhccCCccchHHHHHHHHHHH
Confidence 469999999999876 67888776553 3 23322 3346666442 332 11 1467889
Q ss_pred HHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeec-CcChHHHHHHHHHHHHHHcCC
Q 018515 57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST-NACYGGTAALFNCVNWVESSS 135 (354)
Q Consensus 57 a~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~-~aC~g~~~aL~~A~~~i~sg~ 135 (354)
+..|+++||+++|++|+|||+||+ |+|+++..|+++++|+++||+ ++++.+||++ .||+||++||++|.++++++
T Consensus 176 ~~~A~~~aL~kaGi~p~dID~LVv-~cS~~~~~PSlaa~V~~~LGl--r~~v~afdL~gmGCsggl~aL~lA~~ll~~~- 251 (502)
T PLN02377 176 MFGALDNLFANTNVNPKDIGILVV-NCSLFNPTPSLSAMIVNKYKL--RGNIRSFNLGGMGCSAGVIAVDLAKDMLQVH- 251 (502)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEE-ECCCCCCCCcHHHHHHHHhCC--CCCCeEEecccchhhHHHHHHHHHHHHHHcC-
Confidence 999999999999999999999988 789998899999999999999 6689999999 79999999999999999999
Q ss_pred CCCCEEEEEeecccc--c--CCCCC----CCcccceeEEEEeccCC--------C---c-eeeecccccccccccccccc
Q 018515 136 WDGRYGLVVCTDSAV--Y--AEGPA----RPTGGAAAVVMLVGPDA--------P---V-AFESKLRGSHMSHAYDFYKP 195 (354)
Q Consensus 136 ~~~~~vLVV~~e~~~--~--~~~~~----~~~~GDGAaA~ll~~~~--------~---~-~~~~~~~g~~~~~~~~~~~p 195 (354)
+.++||||++|..+ + .++.+ ..+|||||+|+||++.+ + + ..+.++++...+.+..-..+
T Consensus 252 -~~~~aLVVstE~~S~~~~~~d~~s~lv~n~LFgDGAaAvlLs~~~~~~~~a~~~l~~iv~t~~~~d~~~~~~i~~~~d~ 330 (502)
T PLN02377 252 -RNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKSRDKRRSKYKLVHVVRTHRGADDKAFRCVYQEQDD 330 (502)
T ss_pred -CCCEEEEEEEeccccccCCCCCccccccceeeccccEEEEEecccccccccccccceEEEEEEEEcCCccceeeecccc
Confidence 55999999999953 1 22222 37899999999998732 1 1 12233333322211100001
Q ss_pred CCCC------CccccC-----------CcchHH-------HHHHHHHHHHHHHHHHhhchhCCCCCccccceecccCCch
Q 018515 196 NLAS------EYPVVD-----------GKLSQT-------CYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYN 251 (354)
Q Consensus 196 ~~~~------~~~~~d-----------g~~~~~-------~~~~~~~~~i~~~l~~~g~~~~~~l~~~Did~~v~HQan~ 251 (354)
.++. +.+.+. |+..+. +....+++.+++.++..+ ....+|||||++||+|.
T Consensus 331 ~G~~g~~ls~dl~~v~g~~l~~~i~~lg~~vl~~se~~~~~a~~~~~~~~~~~l~~~~-----p~~~~didhf~iHqggr 405 (502)
T PLN02377 331 AGKTGVSLSKDLMAIAGEALKTNITTLGPLVLPISEQLLFFATLVVKKLFNKKMKPYI-----PDFKLAFDHFCIHAGGR 405 (502)
T ss_pred CCCCCCCCCcchhhHhhHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhcc-----CCcHhhcCEEEECCCCH
Confidence 1211 111122 222111 112233344444443322 03468999999999999
Q ss_pred HHHHHHHHHhhhhhhhhccccchhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhHHHhhcccccccccccCccchHH
Q 018515 252 KLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTAS 331 (354)
Q Consensus 252 ~ii~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~GN~~saS 331 (354)
++++.+.++|++ ++ +++.++..++++||||||+|
T Consensus 406 ~IId~v~k~LgL------------------------~~----------------------~~~e~sr~tL~r~GNTSSaS 439 (502)
T PLN02377 406 AVIDELEKNLQL------------------------LP----------------------VHVEASRMTLHRFGNTSSSS 439 (502)
T ss_pred HHHHHHHHHcCC------------------------Cc----------------------ccchHHHHHHHhcCCchhhH
Confidence 999999999996 22 33444555568999999999
Q ss_pred HHHHHHHHhccCc
Q 018515 332 LYAALASLIHNKH 344 (354)
Q Consensus 332 ip~~L~~~l~~~~ 344 (354)
||++|+.+.++++
T Consensus 440 I~~aL~~~~~~gr 452 (502)
T PLN02377 440 IWYELAYIEAKGR 452 (502)
T ss_pred HHHHHHHHHHcCC
Confidence 9999999987653
No 32
>PLN02854 3-ketoacyl-CoA synthase
Probab=100.00 E-value=2.2e-35 Score=296.75 Aligned_cols=282 Identities=16% Similarity=0.208 Sum_probs=201.0
Q ss_pred ceeEEeEEEEecCCc--cccHHHHHHhh---C-CCcch------hhhcccceeEeecCC-------C-------CCHHHH
Q 018515 3 KNVGILAMDIYFPPT--CVQQEALEAHD---G-ASKGK------YTIGLGQECMAFCSE-------V-------EDVISM 56 (354)
Q Consensus 3 ~~v~I~~ig~ylP~~--~v~~~el~~~~---g-~~~~~------i~~~~Gi~~r~~~~~-------~-------e~~~~L 56 (354)
..++++..+.|.|+. +++.+.+.+.. | .+++. +.++.|+.+..+.++ + +.+...
T Consensus 112 ~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sg~g~~ty~P~~~~~~~~~~~~~~~r~ea~~v 191 (521)
T PLN02854 112 KPVYLVDFACYKPEDERKISVDSFLTMTEENGSFEDETVQFQRRISTRSGLGDETYLPRGITSRPPNLCMEEARAEAEAV 191 (521)
T ss_pred CcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCccccCccccCCCCcchHHHHHHHHHHH
Confidence 469999999999876 67888776543 3 23322 334555543333221 1 234456
Q ss_pred HHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeec-CcChHHHHHHHHHHHHHHcCC
Q 018515 57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST-NACYGGTAALFNCVNWVESSS 135 (354)
Q Consensus 57 a~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~-~aC~g~~~aL~~A~~~i~sg~ 135 (354)
...|+++||+++|++|+|||+||++ +|+++..|++|++|+++||+ ++++.+||++ .||+||++||++|.++++++
T Consensus 192 ~~~~~~~lL~kaGi~p~dID~LIv~-cS~~~p~PSlAa~I~n~LGl--r~~i~afdLsgmGCSggl~aL~lA~~lL~~~- 267 (521)
T PLN02854 192 MFGALDSLFSKTGVKPRDIGILIVN-CSLFNPTPSLSAMIVNHYKL--RTDIKSYNLGGMGCSAGLISIDLANDLLKAN- 267 (521)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEE-CCCCCCCCCHHHHHHHHhCC--CCCceEEecccchhhhHHHHHHHHHHHHHhC-
Confidence 6788999999999999999999985 77888899999999999999 5689999998 89999999999999999999
Q ss_pred CCCCEEEEEeecccc--c---CCCCC---CCcccceeEEEEeccCC---C--------c-eeeecccccccccccccccc
Q 018515 136 WDGRYGLVVCTDSAV--Y---AEGPA---RPTGGAAAVVMLVGPDA---P--------V-AFESKLRGSHMSHAYDFYKP 195 (354)
Q Consensus 136 ~~~~~vLVV~~e~~~--~---~~~~~---~~~~GDGAaA~ll~~~~---~--------~-~~~~~~~g~~~~~~~~~~~p 195 (354)
+.++||||++|..+ + .+..+ ..+|||||+|+||++.+ . + ..+.++++...+.+ ..+
T Consensus 268 -~~~~aLVVstE~~S~~~y~g~Drs~lv~~~LFgDGAAAvlLs~~~~~~~~~k~~L~~~v~t~~~ad~~~~~~i---~~~ 343 (521)
T PLN02854 268 -PNSYAVVVSTENITLNWYFGNDRSMLLCNCIFRMGGAAVLLSNKARDRKRSKYQLVHTVRTHKGADDKNYNCV---YQR 343 (521)
T ss_pred -CCCeEEEEEEeeeecCCCCCCchhhhcceeeeccceeEEEEecccccccccchheeeEEEEEEeeCCCccCeE---Eec
Confidence 55999999999964 2 12222 46899999999998642 1 1 12333444332221 111
Q ss_pred C--CC-------CC-----------ccccCCcchHHHHH--HHHHHHHHHHHHHhhchhCCCCCc------cccceeccc
Q 018515 196 N--LA-------SE-----------YPVVDGKLSQTCYL--MALDTCYKCLCSKYEKLEGKQFSL------SNADYFVFH 247 (354)
Q Consensus 196 ~--~~-------~~-----------~~~~dg~~~~~~~~--~~~~~~i~~~l~~~g~~~~~~l~~------~Did~~v~H 247 (354)
. .| .+ ...+.|+.++.... ......+++.+.+.+ +++ +|||||++|
T Consensus 344 ~d~~G~~g~~lsk~l~~va~~~l~~~i~~~g~~Vl~~se~~~f~~~~i~~~L~~~g------l~~~~pd~~~didhf~iH 417 (521)
T PLN02854 344 EDDKGTIGVSLARELMAVAGDALKTNITTLGPLVLPLSEQFMFFVTLVRRKLLKAK------VKPYIPDFKLAFEHFCIH 417 (521)
T ss_pred cCCCCcccccccccccchhhhhhhhhhhhccccccchHHHHHHHHHHHHHHHHHcC------CCccCCcccccCcEEEEC
Confidence 0 01 00 11134444433222 123567778888877 665 699999999
Q ss_pred CCchHHHHHHHHHhhhhhhhhccccchhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhHHHhhcccccccccccCcc
Q 018515 248 SPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNM 327 (354)
Q Consensus 248 Qan~~ii~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~GN~ 327 (354)
|+|.++++.+.++|++ ++ +++.++..++++||||
T Consensus 418 qggr~IId~v~k~LgL------------------------~~----------------------~~~e~sr~tL~rfGNT 451 (521)
T PLN02854 418 AGGRAVLDELQKNLQL------------------------SD----------------------WHMEPSRMTLHRFGNT 451 (521)
T ss_pred CCCHHHHHHHHHHcCC------------------------Cc----------------------ccccchHHHhhhcCCh
Confidence 9999999999999996 22 3333444456899999
Q ss_pred chHHHHHHHHHHhccCc
Q 018515 328 YTASLYAALASLIHNKH 344 (354)
Q Consensus 328 ~saSip~~L~~~l~~~~ 344 (354)
||+|||++|+++.++++
T Consensus 452 SSASI~~~L~~~~~kGr 468 (521)
T PLN02854 452 SSSSLWYELAYTEAKGR 468 (521)
T ss_pred HhhHHHHHHHHHHHcCC
Confidence 99999999999987654
No 33
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.8e-35 Score=269.95 Aligned_cols=278 Identities=16% Similarity=0.200 Sum_probs=212.6
Q ss_pred eEEeEEEEecCCccccHHHHHHhhC----CC-cchh----hhcccceeEeecCCC-----------------CCHHHHHH
Q 018515 5 VGILAMDIYFPPTCVQQEALEAHDG----AS-KGKY----TIGLGQECMAFCSEV-----------------EDVISMSL 58 (354)
Q Consensus 5 v~I~~ig~ylP~~~v~~~el~~~~g----~~-~~~i----~~~~Gi~~r~~~~~~-----------------e~~~~La~ 58 (354)
..|.|++.++|++.+.|.|+...+. .. -+.| .+.-+|.+|++..|. |.+..|++
T Consensus 2 a~i~sv~t~~Ppy~~~Qse~~d~f~~~~~~~~~~~I~r~l~~~~~i~~R~~v~Pl~~y~e~~~f~ekN~ifie~a~~l~v 81 (356)
T COG3424 2 AVIASVATALPPYRYNQSEITDSFAELPFQEGREDIPRVLHANAQINRRHLVLPLDWYREPHGFGEKNEIFIEEAVPLGV 81 (356)
T ss_pred ceeeecccCCCccccchHHHHHHHHHhccccchHHHHHHHhhccccccceecccHhhccCCCChhhhhhhHHHHHHHHHH
Confidence 4699999999999999988775541 11 1222 234567777776542 47788999
Q ss_pred HHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeec-CcChHHHHHHHHHHHHHHcCCCC
Q 018515 59 TAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST-NACYGGTAALFNCVNWVESSSWD 137 (354)
Q Consensus 59 ~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~-~aC~g~~~aL~~A~~~i~sg~~~ 137 (354)
+|.++||+.+++.|+|||+|+++|+|+.. .|+...+|.++||+ ++++..+.++ .||+++..||..|..|+++. |
T Consensus 82 ~a~r~aL~~~~l~pedId~vv~vtsTG~~-~Ps~dari~~~Lgl--~p~~~Rvpv~glGCaaga~glara~~y~ra~--P 156 (356)
T COG3424 82 DALRRALDGSPLRPEDIDAVVTVTSTGLA-TPSLDARIVGELGL--SPDTRRVPVWGLGCAAGAAGLARARDYCRAA--P 156 (356)
T ss_pred HHHHHHhccCCCCHHHCcEEEEEeecccc-CCChhHHHHhhcCC--CCccceeeeecchhhhhhhHHHHHHHHHhhC--c
Confidence 99999999999999999999999999866 79999999999999 7899999984 79999999999999999999 7
Q ss_pred CCEEEEEeecccc--c--CCCC-----CCCcccceeEEEEeccCCC---c-eeeeccccccccccccccccCCCCCcccc
Q 018515 138 GRYGLVVCTDSAV--Y--AEGP-----ARPTGGAAAVVMLVGPDAP---V-AFESKLRGSHMSHAYDFYKPNLASEYPVV 204 (354)
Q Consensus 138 ~~~vLVV~~e~~~--~--~~~~-----~~~~~GDGAaA~ll~~~~~---~-~~~~~~~g~~~~~~~~~~~p~~~~~~~~~ 204 (354)
..+|||||.|.|+ | .+++ ...+||||++|++++.+.+ . .......++.+....+..+ .+.|.+.
T Consensus 157 ~~~vlvV~vELCSLt~~~~d~t~s~lVgtaLF~DG~AA~vv~gd~~~~~~~~~~p~i~~s~StL~~dse~---~Mgwdv~ 233 (356)
T COG3424 157 DANVLVVCVELCSLTYVFADDTKSNLVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILDSFSTLYPDSED---IMGWDVG 233 (356)
T ss_pred cceEEEEEeeeeeeeeecCCCCcccceeeeeecCCeeEEEEeccccccccCCCCceecccccccCCcccc---ccceeec
Confidence 7999999999985 2 2221 2478999999999987532 1 1111122233222111111 1112233
Q ss_pred CCcchH------HHHH-HHHHHHHHHHHHHhhchhCCCCCccccceecccCCchHHHHHHHHHhhhhhhhhccccchhHh
Q 018515 205 DGKLSQ------TCYL-MALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAA 277 (354)
Q Consensus 205 dg~~~~------~~~~-~~~~~~i~~~l~~~g~~~~~~l~~~Did~~v~HQan~~ii~~~~~~l~~~~~~~~~~~~~~~~ 277 (354)
|.++.+ -.++ ..+.+.+..+|..++ ++.+||+.|+.|..+.|++++..+.|++
T Consensus 234 d~G~~~vlSrdlp~lIe~~l~~~V~~fL~~~~------ls~~dI~~w~~HPGG~KVida~~~sLgl-------------- 293 (356)
T COG3424 234 DQGLKVVLSRDLPNLIESYLAPNVTTFLATHG------LSIEDIEAWVVHPGGPKVIDAYEESLGL-------------- 293 (356)
T ss_pred CCcEEEEEcCchhHHHHHHhhhhHHHHHHHcC------CchhhhceeeeCCCCchHHHHHHHhcCC--------------
Confidence 333321 1222 346678889999999 9999999999999999999999999985
Q ss_pred hhccCCCCCCCCCccccchhHHHHHHhhhhhHHHhhcccccccccccCccchHHHHHHHHHHhcc
Q 018515 278 KEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHN 342 (354)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~GN~~saSip~~L~~~l~~ 342 (354)
++ +++..++.++++||||||||+.++|.+.+++
T Consensus 294 ----------s~----------------------e~l~~s~~~L~~~GNMSSatvLfVL~d~l~~ 326 (356)
T COG3424 294 ----------SP----------------------EALELSWDVLREYGNMSSATVLFVLEDTLQK 326 (356)
T ss_pred ----------CH----------------------HHHHHHHHHHHHhCCccchhhHHHHHHHHHh
Confidence 43 7777888889999999999999999999998
No 34
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....
Probab=100.00 E-value=1.6e-34 Score=250.77 Aligned_cols=172 Identities=54% Similarity=0.863 Sum_probs=148.8
Q ss_pred CceeEEeEEEEecCCccccHHHHHHhhCCCcchhhhcccceeEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEe
Q 018515 2 AKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVG 81 (354)
Q Consensus 2 ~~~v~I~~ig~ylP~~~v~~~el~~~~g~~~~~i~~~~Gi~~r~~~~~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~a 81 (354)
.++|+|.++++|+|..+++.++|++..|.+++++.+++|++++.+++++|++.+||++|++++|++.+++|++|++|+++
T Consensus 2 p~~VGI~~i~~y~p~~~v~~~~La~~~g~d~~K~~~glgq~~~av~~~~ED~vTmA~nAa~~ll~~~~id~~~Ig~l~vg 81 (174)
T PF01154_consen 2 PQNVGIDAIEFYIPRYYVDQEELAEARGVDPGKYTIGLGQEKMAVPPPDEDIVTMAANAAKPLLDRYNIDPDDIGRLIVG 81 (174)
T ss_dssp -SSEEEEEEEEE-ESEEEEHHHHHHHTTS-TCHHHTTT--SEEEE--TTS-HHHHHHHHHHTTHHHHT-HHHHEEEEEEE
T ss_pred CccccEeEEEEecCceEecHHHHHHHhCCCHHHhhhhcCeeEEEeCCCcccHHHHHHHHHHHHHHHcCCCHHHccEEEEe
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeecccccCCCCCCCccc
Q 018515 82 SETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGG 161 (354)
Q Consensus 82 T~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~~~~~~~~~~~~G 161 (354)
|+|..|..++++.+|++.||+.+.++|..||+.++|.|+..||+.|..|++++.++++++|||++|+++|..++.+++.|
T Consensus 82 TES~vD~sKs~~t~v~~ll~~s~~~~~~~~e~k~ACygGTaAL~~a~~~v~s~~~~g~~aLVVasDiA~y~~g~~e~TqG 161 (174)
T PF01154_consen 82 TESGVDKSKSISTYVHQLLGLSGNPDCRGVEMKQACYGGTAALQNAVNWVASSPWDGRKALVVASDIARYDLGSAEPTQG 161 (174)
T ss_dssp -SS-SBSSS-HHHHHHHHTTTTT-SSSEEEEEESGGGHHHHHHHHHHHHHCSTTSTTEEEEEEEEEEE--STTTTGGG-E
T ss_pred ccccccccccHHHHHHHHhCcCCCCceeeeehhhhhHHHHHHHHHHHHHHhcCCCCCCeEEEEeccccccCCCCcccccc
Confidence 99999999999999999999965567999999999999999999999999998767899999999999998877799999
Q ss_pred ceeEEEEeccCC
Q 018515 162 AAAVVMLVGPDA 173 (354)
Q Consensus 162 DGAaA~ll~~~~ 173 (354)
.||+|+||+++.
T Consensus 162 AGAVAmLi~~na 173 (174)
T PF01154_consen 162 AGAVAMLIGPNA 173 (174)
T ss_dssp EEEEEEEEECS-
T ss_pred ceeEEEEecCCC
Confidence 999999999764
No 35
>PLN02192 3-ketoacyl-CoA synthase
Probab=100.00 E-value=2.6e-33 Score=281.17 Aligned_cols=165 Identities=15% Similarity=0.230 Sum_probs=130.1
Q ss_pred ceeEEeEEEEecCCc--cccHHHHHHhh---C-CCcch------hhhcccceeEeecCC-------C-------CCHHHH
Q 018515 3 KNVGILAMDIYFPPT--CVQQEALEAHD---G-ASKGK------YTIGLGQECMAFCSE-------V-------EDVISM 56 (354)
Q Consensus 3 ~~v~I~~ig~ylP~~--~v~~~el~~~~---g-~~~~~------i~~~~Gi~~r~~~~~-------~-------e~~~~L 56 (354)
..++++..+.|.|+. +++.+.+.+.. | .+++. +.++.|+.+..+.++ + +.+..+
T Consensus 100 ~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sglg~~t~~p~~~~~~~~~~~~~~~~~Ea~~~ 179 (511)
T PLN02192 100 RPVYLVDFSCYKPDDSRKCTRKIFMDRSKLTGSFTEENLEFQRKILERSGLGESTYLPEAVLNVPPNPCMAEARKEAETV 179 (511)
T ss_pred CcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCcccCChhhccCCCCccHHHHHHHHHHH
Confidence 469999999999886 57888777554 3 23322 334555544433221 1 345678
Q ss_pred HHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeec-CcChHHHHHHHHHHHHHHcCC
Q 018515 57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST-NACYGGTAALFNCVNWVESSS 135 (354)
Q Consensus 57 a~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~-~aC~g~~~aL~~A~~~i~sg~ 135 (354)
...|+++||+++|++|+|||+||++ +|+++..|+++++|+++||+ ++++.+||++ .||+||++||++|.++++++
T Consensus 180 ~~~Aa~~aL~kaGi~p~DIDiLIv~-~S~~~~~PSlaa~I~n~lGl--r~~i~afdLsgmGCSggl~aLdlA~~lL~a~- 255 (511)
T PLN02192 180 MFGAIDQLLAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKL--RGNILSYNLGGMGCSAGLISIDLAKHLLQVH- 255 (511)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEE-CCCCCCCchHHHHHHHHhCC--CCCceEEEcccchhhhHHHHHHHHHHHHHcC-
Confidence 9999999999999999999999988 56788899999999999999 5689999998 79999999999999999999
Q ss_pred CCCCEEEEEeecccccCC---C--CCC---CcccceeEEEEeccC
Q 018515 136 WDGRYGLVVCTDSAVYAE---G--PAR---PTGGAAAVVMLVGPD 172 (354)
Q Consensus 136 ~~~~~vLVV~~e~~~~~~---~--~~~---~~~GDGAaA~ll~~~ 172 (354)
+.++||||++|..+... + ... .+|||||+|+||++.
T Consensus 256 -~~~~aLVVstE~~S~n~y~g~drs~lv~n~LFgDGAaAvLLs~~ 299 (511)
T PLN02192 256 -PNSYALVISMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNK 299 (511)
T ss_pred -CCCeEEEEEEEeccccCCCCCCHHHHhccccccccceEEEEecc
Confidence 55999999999965221 1 122 679999999999873
No 36
>PLN00415 3-ketoacyl-CoA synthase
Probab=100.00 E-value=5.4e-32 Score=268.05 Aligned_cols=288 Identities=17% Similarity=0.225 Sum_probs=189.8
Q ss_pred ceeEEeEEEEecCCc--cccHHHHHHhh---------------------CCCcchhhhcccceeEeecC--CCCCHHHHH
Q 018515 3 KNVGILAMDIYFPPT--CVQQEALEAHD---------------------GASKGKYTIGLGQECMAFCS--EVEDVISMS 57 (354)
Q Consensus 3 ~~v~I~~ig~ylP~~--~v~~~el~~~~---------------------g~~~~~i~~~~Gi~~r~~~~--~~e~~~~La 57 (354)
..++++..+.|.|+. +++.+.+.+.. |+.++++..+.|+..++.+. +....++|+
T Consensus 58 ~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~F~~~i~~rSGlg~et~~p~~~~~~~~~~~~~~~~~e~em~ 137 (466)
T PLN00415 58 KPVYLVDFSCHQPTDSCKISSETFFNMAKGAQLYTEETIQFMTRILNRSGLGDDTYSPRCMLTSPPTPSMYEARHESELV 137 (466)
T ss_pred CcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCCCCeeeCCccccCCCCCChhhhHHHHHHH
Confidence 468999999999865 67777665432 33344444445555554443 345667788
Q ss_pred HH-HHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecC-cChHHHHHHHHHHHHHHcCC
Q 018515 58 LT-AVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTN-ACYGGTAALFNCVNWVESSS 135 (354)
Q Consensus 58 ~~-Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~-aC~g~~~aL~~A~~~i~sg~ 135 (354)
.. |+++||+++|++|+|||+||+ ++|+.+..|+.+++|+++||+ ++++.+||+++ ||+||++||.+|.++++++
T Consensus 138 i~~A~~~aL~~aGi~p~dID~LIv-s~T~~~~~Pslaa~l~~~LGL--r~~v~~~dL~gmGCsggv~aL~lA~~ll~a~- 213 (466)
T PLN00415 138 IFGALNSLFKKTGIEPREVGIFIV-NCSLFNPNPSLSSMIVNRYKL--KTDVKTYNLSGMGCSAGAISVDLATNLLKAN- 213 (466)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEE-ECcCCCCCchHHHHHHHHhCC--CCCceEEEeccccchHHHHHHHHHHHHHHhC-
Confidence 77 777889999999999999985 578877789999999999999 67999999986 9999999999999999999
Q ss_pred CCCCEEEEEeecccc---cCCC--CC---CCcccceeEEEEeccCCC----ceeee-cccccccc---ccccc--cccCC
Q 018515 136 WDGRYGLVVCTDSAV---YAEG--PA---RPTGGAAAVVMLVGPDAP----VAFES-KLRGSHMS---HAYDF--YKPNL 197 (354)
Q Consensus 136 ~~~~~vLVV~~e~~~---~~~~--~~---~~~~GDGAaA~ll~~~~~----~~~~~-~~~g~~~~---~~~~~--~~p~~ 197 (354)
++++||||++|.++ |..+ .. ..+|||||+|+||+.++. ..+.+ ....++.. ..+.. +.-.
T Consensus 214 -~~~~aLVVs~E~~S~~~~~~~dr~~lv~n~LFgDGAAAvlLs~~~~~~~~~~~~L~~~vrt~~~~~d~~~~~~~~~~d- 291 (466)
T PLN00415 214 -PNTYAVIVSTENMTLSMYRGNDRSMLVPNCLFRVGGAAVMLSNRSQDRVRSKYELTHIVRTHKGSSDKHYTCAEQKED- 291 (466)
T ss_pred -CCCEEEEEEEecccccccCCCcHhHhccceeecccceEEEEecCcccccCccceeeeEEEecCCCChhhhcceeeeec-
Confidence 66999999999964 2221 12 368999999999987531 11111 01111111 01110 0000
Q ss_pred CCCc-cccCCcchHHHHHHHHHHHHHHH-------HHHh-------hch-hCCCCCc----cc--cceecccCCchHHHH
Q 018515 198 ASEY-PVVDGKLSQTCYLMALDTCYKCL-------CSKY-------EKL-EGKQFSL----SN--ADYFVFHSPYNKLVQ 255 (354)
Q Consensus 198 ~~~~-~~~dg~~~~~~~~~~~~~~i~~~-------l~~~-------g~~-~~~~l~~----~D--id~~v~HQan~~ii~ 255 (354)
...+ .+.-.+......-+.+...+..+ .++. .+. ...+++. -+ +++|++|+.+.++++
T Consensus 292 ~~G~~gv~Lsk~lp~va~~~l~~ni~~l~p~vlp~~e~~~~~~~~i~~~~~~~~~~~~~pd~~~~~~hf~iHpGGraVLd 371 (466)
T PLN00415 292 SKGIVGVALSKELTVVAGDTLKTNLTALGPLVLPLSEKLRFILFLVKSKLFRLKVSPYVPDFKLCFKHFCIHAGGRALLD 371 (466)
T ss_pred CCCcceEEEChHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHhhhhhhccCCCCCCCccccceeEEecCCcHHHHH
Confidence 0000 00000111112222222212111 1100 000 0001222 23 889999999999999
Q ss_pred HHHHHhhhhhhhhccccchhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhHHHhhcccccccccccCccchHHHHHH
Q 018515 256 KSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAA 335 (354)
Q Consensus 256 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~GN~~saSip~~ 335 (354)
.+.+.|++ ++ +++.+|..++++||||||+||++.
T Consensus 372 ave~~LgL------------------------~~----------------------~~le~Sr~vL~r~GN~SSsSV~yv 405 (466)
T PLN00415 372 AVEKGLGL------------------------SE----------------------FDLEPSRMTLHRFGNTSSSSLWYE 405 (466)
T ss_pred HHHHHcCC------------------------CH----------------------HHHHHHHHHHHHhCCchhhhHHHH
Confidence 99999985 43 778888889999999999999999
Q ss_pred HHHHhcc
Q 018515 336 LASLIHN 342 (354)
Q Consensus 336 L~~~l~~ 342 (354)
|.....+
T Consensus 406 L~~~~~~ 412 (466)
T PLN00415 406 LAYVEAK 412 (466)
T ss_pred HHHHHhh
Confidence 9998744
No 37
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=99.94 E-value=1.8e-26 Score=213.92 Aligned_cols=210 Identities=14% Similarity=0.056 Sum_probs=165.4
Q ss_pred CCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHHH
Q 018515 51 EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNW 130 (354)
Q Consensus 51 e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~~ 130 (354)
.+..+|+.+|++++|+++|++++|||.||++|+++++..|+++.+|+..+|+ + +..+++++.+|+|++.||..|..+
T Consensus 5 ~~~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~--~-~~~~~~i~~~C~s~~~al~~A~~~ 81 (254)
T cd00327 5 ITASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGI--S-GGPAYSVNQACATGLTALALAVQQ 81 (254)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCC--C-CCCcceeccHhHHHHHHHHHHHHH
Confidence 3478999999999999999999999999999999888789999999999999 4 788999999999999999999999
Q ss_pred HHcCCCCCCEEEEEeecccccCCCCCCCcccceeEEEEeccCCC-------ceeeeccccccccccccccccCCCCCccc
Q 018515 131 VESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVGPDAP-------VAFESKLRGSHMSHAYDFYKPNLASEYPV 203 (354)
Q Consensus 131 i~sg~~~~~~vLVV~~e~~~~~~~~~~~~~GDGAaA~ll~~~~~-------~~~~~~~~g~~~~~~~~~~~p~~~~~~~~ 203 (354)
|++|.+ +++||+++|. .+|||||+|+||++.+. .... ..+.... ..+. ..
T Consensus 82 i~~g~~--~~~lv~~~e~---------~~~gdGAaa~vL~~~~~a~~~~~~~~~~--i~~~~~~-----~~~~--~~--- 138 (254)
T cd00327 82 VQNGKA--DIVLAGGSEE---------FVFGDGAAAAVVESEEHALRRGAHPQAE--IVSTAAT-----FDGA--SM--- 138 (254)
T ss_pred HHCCCC--CEEEEEecce---------eeecceEEEEEECcHHHHHHCCCceEEE--EEEEEEc-----CCCC--CC---
Confidence 999955 9999999998 68899999999987431 0001 0111100 0010 00
Q ss_pred cCCcchHHHHHHHHHHHHHHHHHHhhchhCCCCCccccceecccCCchHHHHHHHHHhhhhhhhhccccchhHhhhccCC
Q 018515 204 VDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGP 283 (354)
Q Consensus 204 ~dg~~~~~~~~~~~~~~i~~~l~~~g~~~~~~l~~~Did~~v~HQan~~ii~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 283 (354)
. .....+.+.+.+++++++++ ++++|||+|++||++..+.....+.++++.
T Consensus 139 -~----~~~~~~~~~~~i~~~l~~ag------~~~~did~~~~h~~~~~~~~~~~~~~~~~~------------------ 189 (254)
T cd00327 139 -V----PAVSGEGLARAARKALEGAG------LTPSDIDYVEAHGTGTPIGDAVELALGLDP------------------ 189 (254)
T ss_pred -C----CCCChHHHHHHHHHHHHHcC------CCHHHCCEEEccCCcCccccHHHHHHHHHH------------------
Confidence 0 01123556788899999999 999999999999999999999999998521
Q ss_pred CCCCCCCccccchhHHHHHHhhhhhHHHhhcc--cccccccccCccchHHHHHHHHHHhccC
Q 018515 284 FSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQ--PSTLIPKQVGNMYTASLYAALASLIHNK 343 (354)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~--~~~~~~~~~GN~~saSip~~L~~~l~~~ 343 (354)
++.. +......+|||+++||.|+.|.+.++..
T Consensus 190 ----------------------------~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~ 223 (254)
T cd00327 190 ----------------------------DGVRSPAVSATLIMTGHPLGAAGLAILDELLLML 223 (254)
T ss_pred ----------------------------hCCCCCceeccccccccchHHHHHHHHHHHHHHH
Confidence 2221 1122346999999999999999997653
No 38
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=99.93 E-value=2.7e-25 Score=202.25 Aligned_cols=166 Identities=22% Similarity=0.267 Sum_probs=130.6
Q ss_pred ceeEEeEEEEecCCccccHHHHHHhh----CCCc-----ch---hhhcccceeEeecCCC--------------------
Q 018515 3 KNVGILAMDIYFPPTCVQQEALEAHD----GASK-----GK---YTIGLGQECMAFCSEV-------------------- 50 (354)
Q Consensus 3 ~~v~I~~ig~ylP~~~v~~~el~~~~----g~~~-----~~---i~~~~Gi~~r~~~~~~-------------------- 50 (354)
....|.|||+.+|+++++++++.+.+ +.+. ++ +-+++||++|+..-+.
T Consensus 13 g~A~Il~IgTA~P~~~~~Q~~~~e~~~~~~~~~~~~~~~~~l~ri~~~sgI~~R~~vl~~~~~~~~p~~~~~~~ps~~~R 92 (226)
T PF00195_consen 13 GPAYILSIGTAVPPHRITQEEIAEFFFRITHSDDLPDLRRKLRRIFENSGIEKRHSVLPEEWLDEYPSFWDFADPSLAER 92 (226)
T ss_dssp SSEEEEEEEEE-SSEEEEGCCHHHHHHHHTT-TTGHHHHHHHHHHHHHST-SEEEESS-HHHHHTSGGGHSSSSS-HHHH
T ss_pred CCeEEEEEEEeCCCceecHHHHHHHHHHHhcccchhHHHHHHHhhhhccccceeccccchhhhhcCcchhhccCccHHHH
Confidence 45899999999999999999887652 2222 22 3368999999987431
Q ss_pred -----CCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeec-CcChHHHHHH
Q 018515 51 -----EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST-NACYGGTAAL 124 (354)
Q Consensus 51 -----e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~-~aC~g~~~aL 124 (354)
+.+..|+.+|+++||+++|++++||++||++|+|+.. .|++..+|.++||| ++++..+.|+ .||+|++.||
T Consensus 93 ~~~~~~~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~-~PglD~~l~~~LgL--~~~v~R~~i~~~GC~gg~~~L 169 (226)
T PF00195_consen 93 NALYAEEAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGIA-APGLDARLINRLGL--RPDVQRTPIFGMGCAGGAAGL 169 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSSE-CS-HHHHHHHHHT----TTSEEEEEES-GGGHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCcC-CCchhHHHHhcCCC--CCCcEEEEEeccchhhHHHHH
Confidence 3567899999999999999999999999999999854 79999999999999 7899999985 7999999999
Q ss_pred HHHHHHHHcCCCCCCEEEEEeecccc--cC-C-CC------CCCcccceeEEEEeccCC
Q 018515 125 FNCVNWVESSSWDGRYGLVVCTDSAV--YA-E-GP------ARPTGGAAAVVMLVGPDA 173 (354)
Q Consensus 125 ~~A~~~i~sg~~~~~~vLVV~~e~~~--~~-~-~~------~~~~~GDGAaA~ll~~~~ 173 (354)
..|..+.+++ |+.+||||++|.|+ +. + +. ...+|||||+|+||+.+|
T Consensus 170 ~~A~~~~~~~--p~a~VLvv~vElcsl~~~~~~~~~~~~lv~~aLFgDGaAA~vv~~dP 226 (226)
T PF00195_consen 170 RRAKDIARAN--PGARVLVVCVELCSLHFQAPNDDSLDNLVANALFGDGAAAVVVGADP 226 (226)
T ss_dssp HHHHHHHHHS--TT-EEEEEEEEEGGGTHHHCCTTSHHHHHHHHHB-EEEEEEEEESS-
T ss_pred HHHHHHHhCC--ccceEEEEEEEeeEEEEecCCcccHHHHhHHhhhcCCceEEEEccCC
Confidence 9999999999 78999999999985 32 1 21 136799999999998764
No 39
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=99.91 E-value=1.8e-24 Score=208.45 Aligned_cols=222 Identities=15% Similarity=0.088 Sum_probs=162.7
Q ss_pred HHHHHHHHHHHHHHHcCCC----cCCccEEEEeeccCCCC---------------------CCcHHHHHHHHhcCCCCCC
Q 018515 53 VISMSLTAVTNLLEKYKID----PKQIGRLEVGSETVIDK---------------------SKSIKTFLMQIFEKFGNTD 107 (354)
Q Consensus 53 ~~~La~~Aa~~aL~~agi~----~~dId~lI~aT~t~~~~---------------------~p~~a~~v~~~LGl~g~~~ 107 (354)
..+|+++|+++||+++|++ +++||.||++|.++++. .|+++..|+..||+ +
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl----~ 86 (332)
T cd00825 11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGI----H 86 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCC----C
Confidence 7889999999999999999 99999999999877664 67889999999999 4
Q ss_pred eeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeecccc--cC--------------------CCCCCCcccceeE
Q 018515 108 IEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV--YA--------------------EGPARPTGGAAAV 165 (354)
Q Consensus 108 ~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~~--~~--------------------~~~~~~~~GDGAa 165 (354)
.++++++.+|+|++.||..|..+|++|.+ +++||+++|... +. ......++||||+
T Consensus 87 g~~~~v~~~cas~~~al~~A~~~i~~g~~--~~~Lv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gdGaa 164 (332)
T cd00825 87 GPAYDVSAACAGSLHALSLAADAVQNGKQ--DIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAG 164 (332)
T ss_pred CCccccccHhHHHHHHHHHHHHHHHcCCC--CEEEEeccccccCHHHHHHHhhccccCCCCCCCCCCCCCCCEEEEeeEE
Confidence 55789999999999999999999999955 999999999742 10 0112467899999
Q ss_pred EEEeccCCC-------ceeeeccccccccccccccccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHhhchhCCCCCc
Q 018515 166 VMLVGPDAP-------VAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSL 238 (354)
Q Consensus 166 A~ll~~~~~-------~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~dg~~~~~~~~~~~~~~i~~~l~~~g~~~~~~l~~ 238 (354)
|+||++.+. +.... .+.... ..+.. . +. +....+.+.++++++|++++ +++
T Consensus 165 A~vL~~~~~a~~~~~~~~~~i--~~~~~~-----~~~~~-~------~~--~~~~~~~~~~~i~~al~~ag------l~~ 222 (332)
T cd00825 165 ALVVEELEHALARGAHIYAEI--VGTAAT-----IDGAG-M------GA--FAPSAEGLARAAKEALAVAG------LTV 222 (332)
T ss_pred EEEECcHHHHHHCCCeEEEEE--EEEEEc-----cCCCC-C------CC--CCcCHHHHHHHHHHHHHHcC------CCH
Confidence 999986421 11110 111000 01100 0 00 01123456688899999999 999
Q ss_pred cccceecccCCchHHHHHHHHHhhhhhhhhccccchhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhHHHhhccccc
Q 018515 239 SNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPST 318 (354)
Q Consensus 239 ~Did~~v~HQan~~ii~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 318 (354)
+|||++++||.+.++.+.+.++++.+. .+ ++-.+..
T Consensus 223 ~did~~~~h~~~~~~~~~~e~~~~~~~----------------------~~----------------------~~~~~~~ 258 (332)
T cd00825 223 WDIDYLVAHGTGTPIGDVKELKLLRSE----------------------FG----------------------DKSPAVS 258 (332)
T ss_pred hHCCEEEccCCCCCCCCHHHHHHHHHH----------------------hC----------------------CCCceeE
Confidence 999999999999999988888887421 00 1000111
Q ss_pred ccccccCccchHHHHHHHHHHhccCchh
Q 018515 319 LIPKQVGNMYTASLYAALASLIHNKHSE 346 (354)
Q Consensus 319 ~~~~~~GN~~saSip~~L~~~l~~~~~~ 346 (354)
.+..+|||+++||.++.|..+++..+.+
T Consensus 259 ~~~~~~G~~~aas~~~~l~~~~~~~~~~ 286 (332)
T cd00825 259 ATKAMTGNLSSAAVVLAVDEAVLMLEHG 286 (332)
T ss_pred CCCcccccchhHhHHHHHHHHHHHHhcC
Confidence 2347999999999999999998754443
No 40
>PF08540 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A synthase C terminal; InterPro: IPR013746 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the C-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1TXT_D 1TVZ_A 1X9E_B 2HDB_B 3V4X_A 3V4N_C 2P8U_A 2FA0_A 2F9A_A 2F82_A ....
Probab=99.87 E-value=1.4e-22 Score=190.45 Aligned_cols=167 Identities=60% Similarity=0.922 Sum_probs=129.6
Q ss_pred eeeccccccccccccccccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHhhchh---CCCCCccccceecccCCchHH
Q 018515 177 FESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLE---GKQFSLSNADYFVFHSPYNKL 253 (354)
Q Consensus 177 ~~~~~~g~~~~~~~~~~~p~~~~~~~~~dg~~~~~~~~~~~~~~i~~~l~~~g~~~---~~~l~~~Did~~v~HQan~~i 253 (354)
++.+..|+|+.+.+|||+|...++||++||++++.+|++++..+++.+.++..+.. +.....+|+|++++|.|+.+|
T Consensus 3 ~d~~~~~~~m~~~yDFyKP~~~seyP~VDG~~S~~~Yl~ald~~y~~y~~k~~~~~~~~~~~~~l~~~d~~~fH~Py~kl 82 (282)
T PF08540_consen 3 FDRGLRGSHMEHVYDFYKPDLSSEYPVVDGKLSIQCYLDALDKCYKRYKEKVEKLANRGNKGTSLDDFDYVCFHSPYCKL 82 (282)
T ss_dssp EETTEEEEEE----SEE-BTTT-SS-EE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSST--GGG-SEEEE--SSHHH
T ss_pred ccCCCceeehhhchhccCCCCCCCCcEEchHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCccccceEEEecCchHH
Confidence 45556789999999999999889999999999999999999999999999874211 223889999999999999999
Q ss_pred HHHHHHHhhhhhhhhccccc-hhHhhhccCCCCCCCCCccccchhHHHHHHhhhhhHHHhhcccccccccccCccchHHH
Q 018515 254 VQKSFARLLFNDFMRNASSV-DEAAKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASL 332 (354)
Q Consensus 254 i~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~GN~~saSi 332 (354)
+++...+|.+.++..++..+ .++..+.+++..+++.++++.|+++||++.+..++.|.+|+.+++.+.+++|||||||+
T Consensus 83 v~Ka~~rl~~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~s~~dr~lek~~~~~s~~~~~~kv~psl~~~~~vGN~YTaSl 162 (282)
T PF08540_consen 83 VQKAFARLLYNDFLRNPSSEEFEEIDAELAPFRDLPLEESYFDRDLEKAFMKASKEDFERKVEPSLLYSRQVGNMYTASL 162 (282)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHCCHGGGTT--GGGHCTHHHHHHHHHHHHHHHHHHHCHHHTHHHHHHB--GGGHH
T ss_pred HHHHHHHHHHhhhhhccccccccccchhhhhhccCCcccccccHHHHHHHHHHHHHHHHHHHhHHHHHHHHcCceehHHH
Confidence 99999999998887776653 33445566777788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccC
Q 018515 333 YAALASLIHNK 343 (354)
Q Consensus 333 p~~L~~~l~~~ 343 (354)
+++|+++|.+.
T Consensus 163 y~~L~SlL~~~ 173 (282)
T PF08540_consen 163 YLGLASLLSSA 173 (282)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHhhcc
Confidence 99999999543
No 41
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=99.84 E-value=3.2e-20 Score=181.15 Aligned_cols=225 Identities=14% Similarity=0.075 Sum_probs=161.8
Q ss_pred CCceeEEeEEEEecCCcc------------ccHHHHHHhhCCC-cchhhhcccceeEeecCCCCCHHHHHHHHHHHHHHH
Q 018515 1 MAKNVGILAMDIYFPPTC------------VQQEALEAHDGAS-KGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEK 67 (354)
Q Consensus 1 ~~~~v~I~~ig~ylP~~~------------v~~~el~~~~g~~-~~~i~~~~Gi~~r~~~~~~e~~~~La~~Aa~~aL~~ 67 (354)
|..++.|.+.|...|=-. ++|.+...+++.. ++||..++|+.+|++.. .+...+|+.+|+++||++
T Consensus 1 ~~~~v~I~~~g~vs~lG~~~~~~~aa~ragi~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~r~~~La~~Al~~aL~~ 79 (348)
T PRK06147 1 MMRALAIVGSGMVTAVGLDAPSSCAAIRARLDNFQETRFIDPPGGEWLIGAPVPLPPPWRG-PERLAEMAAPAIAEALEG 79 (348)
T ss_pred CCCceEEEecceeecCcCCHHHHHHHHHcccccccccccccCCCCCceEeecCcCCcccCc-hHHHHHHHHHHHHHHHHh
Confidence 445788999998887543 4555555555554 78998899999898854 568899999999999999
Q ss_pred cC-CCcCCccEEEEeec-----cCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEE
Q 018515 68 YK-IDPKQIGRLEVGSE-----TVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYG 141 (354)
Q Consensus 68 ag-i~~~dId~lI~aT~-----t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~v 141 (354)
++ +++++||++|+.++ ++++..|+++..++++||+ .....++||+.+|+|+++||..|..+|++|.+ +.+
T Consensus 80 a~~~~~~~i~lil~~~~~~~~~~~~~~~~~~~~~~~~~lG~--~~~~~~~~i~~~casg~~Al~~A~~~i~~G~~--~~~ 155 (348)
T PRK06147 80 LPALDASEAPLLLCVAEEERPGRPPDLEERLLRELEARLGL--RLEPGSAVIARGRVSGAVALAQARRLIAAGGC--PRV 155 (348)
T ss_pred cccccccCCcEEEEeCchhcCCCCcchHHHHHHHHHHHhCC--CCCCCcccccccchHHHHHHHHHHHHHHcCCC--CEE
Confidence 99 89999999998654 3445556778899999999 34567899999999999999999999999966 999
Q ss_pred EEEeeccc-cc--------------CCCCCCCcccceeEEEEeccCCC-----ceeeeccccccccccccccccCCCCCc
Q 018515 142 LVVCTDSA-VY--------------AEGPARPTGGAAAVVMLVGPDAP-----VAFESKLRGSHMSHAYDFYKPNLASEY 201 (354)
Q Consensus 142 LVV~~e~~-~~--------------~~~~~~~~~GDGAaA~ll~~~~~-----~~~~~~~~g~~~~~~~~~~~p~~~~~~ 201 (354)
||+++|.. .. .++...+++||||++++|++.+. ..+. + .|.... .+.+.. ....
T Consensus 156 lvgg~d~~~~~~~~~~~~~~~~l~~~~~~~G~v~GEGA~a~vLe~~~~A~~rga~i~-a-~g~~~~--~~~~~~--~~~~ 229 (348)
T PRK06147 156 LVAGVDSLLTGPTLAHYEARDRLLTSQNSNGFIPGEAAAAVLLGRPAGGEAPGLPLL-G-LGLGRE--PAPVGE--SEDL 229 (348)
T ss_pred EEEeeccccCHHHHHHHHHhhccCCCCCCCceeeeceEEEEEEccHhhhhcCCCceE-E-EEEeec--CCCccc--CCCC
Confidence 99999973 20 11124578999999999986431 1000 0 111100 000000 0000
Q ss_pred cccCCcchHHHHHHHHHHHHHHHHHHhhchhCCCCCccccceecccCCch
Q 018515 202 PVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYN 251 (354)
Q Consensus 202 ~~~dg~~~~~~~~~~~~~~i~~~l~~~g~~~~~~l~~~Did~~v~HQan~ 251 (354)
|. +| +.+.+++++.|++++ ++++||||++.|-.+.
T Consensus 230 p~-~g--------~gl~~ai~~AL~~ag------l~~~dId~v~ah~~gt 264 (348)
T PRK06147 230 PL-RG--------DGLTQAIRAALAEAG------CGLEDMDYRIADLNGE 264 (348)
T ss_pred CC-Ch--------HHHHHHHHHHHHHcC------CCHHHCCEEEcCCCCC
Confidence 10 11 456688899999988 9999999999995443
No 42
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=99.79 E-value=1.6e-18 Score=162.18 Aligned_cols=166 Identities=19% Similarity=0.284 Sum_probs=134.5
Q ss_pred ceeEEeEEEEecCCc--cccHHHHHHhhC----CCc------chhhhcccceeEeecCCC--------------CCHHHH
Q 018515 3 KNVGILAMDIYFPPT--CVQQEALEAHDG----ASK------GKYTIGLGQECMAFCSEV--------------EDVISM 56 (354)
Q Consensus 3 ~~v~I~~ig~ylP~~--~v~~~el~~~~g----~~~------~~i~~~~Gi~~r~~~~~~--------------e~~~~L 56 (354)
..|+++..+.|-|+. +++.+.+.+... .++ .++..+.|+.++.+.++. +.+..+
T Consensus 7 r~VYLvDfac~kP~~~~~v~~~~~~e~~~~~~~f~~~sl~F~~kIlerSGlG~eTy~P~~~~~~p~~~s~~~a~~Eae~v 86 (290)
T PF08392_consen 7 RPVYLVDFACYKPPDELRVSREEFIEHARRCGRFDEESLDFQRKILERSGLGDETYLPPALHEIPPDPSLAAAREEAEMV 86 (290)
T ss_pred CCEEEEeeeecCCCcccccCHHHHHHHHHhcccCChhHHHHHHHHHHhcCCCccccCCcccccCCCcccHHHHHHHHHHH
Confidence 579999999999876 588888876542 222 223456777777665431 234558
Q ss_pred HHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEee-cCcChHHHHHHHHHHHHHHcCC
Q 018515 57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDS-TNACYGGTAALFNCVNWVESSS 135 (354)
Q Consensus 57 a~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di-~~aC~g~~~aL~~A~~~i~sg~ 135 (354)
...|++++|+++|++|+|||.||+.+++ ..+.||.+++|++++|+ ++++..|++ ++||++++.++++|+++++..
T Consensus 87 ~f~av~~LL~ktgv~p~dIdiLVvncs~-f~ptPSLsamIvnr~~m--r~di~~~nLsGMGCsAgliai~lA~~lL~~~- 162 (290)
T PF08392_consen 87 IFGAVDDLLAKTGVKPSDIDILVVNCSL-FNPTPSLSAMIVNRYGM--RSDIKSYNLSGMGCSAGLIAIDLAKDLLQAH- 162 (290)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECcC-CCcCCcHHHHHHHHhCC--CcCeeeecccCCcchhhHHHHHHHHHHHHhC-
Confidence 8999999999999999999999998876 57789999999999999 789999998 589999999999999999999
Q ss_pred CCCCEEEEEeecccc---cCCCC-----CCCcccceeEEEEeccCC
Q 018515 136 WDGRYGLVVCTDSAV---YAEGP-----ARPTGGAAAVVMLVGPDA 173 (354)
Q Consensus 136 ~~~~~vLVV~~e~~~---~~~~~-----~~~~~GDGAaA~ll~~~~ 173 (354)
|+.++|||++|.++ |.-++ +.-+|+|||+|+|++..+
T Consensus 163 -p~~~ALVVstE~~s~~~Y~G~~rsmlv~NcLFr~GgAAvLLSn~~ 207 (290)
T PF08392_consen 163 -PNSYALVVSTENISANWYRGNDRSMLVSNCLFRMGGAAVLLSNKP 207 (290)
T ss_pred -CCcEEEEEEEeecccccccCCcHHHhhccccccCCceeEEeecCc
Confidence 77999999999964 32221 246799999999998754
No 43
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=99.77 E-value=1e-17 Score=158.76 Aligned_cols=222 Identities=13% Similarity=0.061 Sum_probs=144.1
Q ss_pred ceeEEeEEEEecCCccccHHHHHHhhCCCcchhhhcccceeEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEee
Q 018515 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGS 82 (354)
Q Consensus 3 ~~v~I~~ig~ylP~~~v~~~el~~~~g~~~~~i~~~~Gi~~r~~~~~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT 82 (354)
.++.|.+.++.+-+.. -+--|...++.-.+.. ..|.+ + ++.+..+|+.+|+++||+++|++++|||+||+++
T Consensus 8 ~~p~i~~~~~~~g~~e-~~gpl~~~fd~~~~d~--~~g~k--s---~EkAe~eLa~eAa~~ALekAGL~~~DID~IIvGd 79 (327)
T TIGR02845 8 NPPVIVSAGTAVGPKE-GEGPLGDYFDKIYDDL--YCGED--S---WEKAERKLMEDAVNLALKKANLKKDDVDFFLAGD 79 (327)
T ss_pred CCCEEEEEEEEecCcc-ccCCChhhCCEEEecc--ccCCc--C---cchhHHHHHHHHHHHHHHHcCCCHHHCCEEEEeC
Confidence 3578888888776643 1122333333211111 12332 1 2456789999999999999999999999999997
Q ss_pred ccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeeccc-------ccC---
Q 018515 83 ETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA-------VYA--- 152 (354)
Q Consensus 83 ~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~-------~~~--- 152 (354)
++++ +..++++++.||+ + .||++++|++|++||.+|..+|++|.+ ++||||++|.. ++.
T Consensus 80 -l~~Q--~~~As~vA~~LGI---P---~fdV~~ACSTf~~AL~lAa~lI~SG~a--d~VLVV~Ssh~S~AErqfr~p~ey 148 (327)
T TIGR02845 80 -LLNQ--IITANFVARDLGI---P---FLGLYGACSTSMETLALGAMLVDGGFA--DRVLAATSSHYATAERQFRYPTEY 148 (327)
T ss_pred -CCCc--ccHHHHHHHHhCC---C---EEEEeccCHHHHHHHHHHHHHHhCCCC--CEEEEEEecccchhhhhccccccc
Confidence 3433 4578999999998 3 499999999999999999999999966 99999998873 232
Q ss_pred ---CCCCCCcccceeEEEEeccCC-CceeeeccccccccccccccccCCCCCccccCCcchHHHH-HHHHHHHHHHHHHH
Q 018515 153 ---EGPARPTGGAAAVVMLVGPDA-PVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCY-LMALDTCYKCLCSK 227 (354)
Q Consensus 153 ---~~~~~~~~GDGAaA~ll~~~~-~~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~dg~~~~~~~-~~~~~~~i~~~l~~ 227 (354)
++.+..+|||||+|+||++.+ +..+..-+.|.-.+ +...+|. | |-.. ..+--..|...++.
T Consensus 149 g~q~~~ta~~tgdGAGA~vl~~~~~~~~i~~~t~gkv~d--~g~~d~~--------n----mgaamapaa~dti~~h~~d 214 (327)
T TIGR02845 149 GVQKPPTAQWTVTGAGAVLLASTGGGPRITSATIGKVVD--YGITDPL--------D----MGAAMAPAAADTIEAHFKD 214 (327)
T ss_pred ccCCCCeeeEEEcccEEEEEeecCCCCceEEEEEEEEEe--cCCCCcc--------c----chhhhhHHHHHHHHHHHHH
Confidence 122457899999999998754 21111112332211 1112221 1 1111 12223445566666
Q ss_pred hhchhCCCCCccccceecccC---CchHHHHHHHHHhhh
Q 018515 228 YEKLEGKQFSLSNADYFVFHS---PYNKLVQKSFARLLF 263 (354)
Q Consensus 228 ~g~~~~~~l~~~Did~~v~HQ---an~~ii~~~~~~l~~ 263 (354)
.+ .+++|.|.++.-- .+.+|+++++++-|+
T Consensus 215 ~~------~~~~~yd~i~tgdlg~vg~~i~~~ll~~~g~ 247 (327)
T TIGR02845 215 TG------RSVDDYDLIVTGDLARVGSEILRKLLKERGY 247 (327)
T ss_pred cC------CChhhccEEEecchHHHHHHHHHHHHHHcCC
Confidence 67 9999999998743 444556666655554
No 44
>PRK08304 stage V sporulation protein AD; Validated
Probab=99.69 E-value=6.5e-16 Score=146.92 Aligned_cols=219 Identities=12% Similarity=0.040 Sum_probs=143.4
Q ss_pred eeEEeEEEEecCCccccHHHHHHhhCC--CcchhhhcccceeEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEe
Q 018515 4 NVGILAMDIYFPPTCVQQEALEAHDGA--SKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVG 81 (354)
Q Consensus 4 ~v~I~~ig~ylP~~~v~~~el~~~~g~--~~~~i~~~~Gi~~r~~~~~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~a 81 (354)
++.|.+.++.+-+.. -+--|...++. ++.+ +|. +. ++...++|+.+|+++||+++|++++|||++|++
T Consensus 15 ~p~i~~~~~~~g~~E-~~gpl~~~fd~~~~d~~----~Ge--~s---wEkAeseLa~eAa~~ALekAGI~~~DID~lI~G 84 (337)
T PRK08304 15 PPYIISTGTIVGPKE-GEGPLGKYFDKILDDDY----CGE--KS---WEKAERKMMEDAIQQALQKANLKKSDIDYLLAG 84 (337)
T ss_pred CCEEEEEEEEecCcc-cCCCChhhCCeEecccc----cCC--cC---ccccHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 467888888776543 11123333332 1111 121 22 245778999999999999999999999999999
Q ss_pred eccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeeccc-------ccCC-
Q 018515 82 SETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA-------VYAE- 153 (354)
Q Consensus 82 T~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~-------~~~~- 153 (354)
+. ..+ +..++.+++.||+ + +||++++|++|++||.+|..+|++|.+ ++||||+++.. +|..
T Consensus 85 dl-l~Q--~~sAs~vA~~LGI---P---a~dV~gACST~~~AL~lAa~lI~SG~a--d~VLVV~Ssh~s~aerqfr~P~e 153 (337)
T PRK08304 85 DL-LNQ--IISANFAARELGI---P---FLGLYGACSTMMESLALGSMLIDGGFA--DRVLAATSSHFATAERQFRFPTE 153 (337)
T ss_pred CC-CCC--cchHHHHHHHhCC---c---EEEEeccCHHHHHHHHHHHHHHhcCCC--CEEEEEEcchhhhhhhhccCchh
Confidence 75 222 4678899999987 2 899999999999999999999999965 99999999973 2221
Q ss_pred ----C-CCCCcccceeEEEEeccCC-CceeeeccccccccccccccccCCCCCccccCCcchHHHH-HHHHHHHHHHHHH
Q 018515 154 ----G-PARPTGGAAAVVMLVGPDA-PVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCY-LMALDTCYKCLCS 226 (354)
Q Consensus 154 ----~-~~~~~~GDGAaA~ll~~~~-~~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~dg~~~~~~~-~~~~~~~i~~~l~ 226 (354)
+ .+...+++||+|+||++.. ...+...+.|.-.+ +...+|. | |-.. -.+-...|...++
T Consensus 154 yg~qrp~taqwtvtGAGA~i~~~~~~~~~i~~~t~Gkv~D--~g~~d~~--------n----mgaaMapAa~dti~~h~~ 219 (337)
T PRK08304 154 YGGQRPPTAQWTVTGAGAVLLSREGSGPRITHATIGKVVD--LGIKDPN--------D----MGAAMAPAAADTIQQHFK 219 (337)
T ss_pred ccccCCCcceEEeeccEEEEEecCCCCceEEEEeEEEEEe--cCCCCcc--------c----chhhhhHHHHHHHHHHHH
Confidence 1 2345679999999998764 22222112332211 1112221 1 1111 1222244556666
Q ss_pred HhhchhCCCCCccccceeccc---CCchHHHHHHHHHhhh
Q 018515 227 KYEKLEGKQFSLSNADYFVFH---SPYNKLVQKSFARLLF 263 (354)
Q Consensus 227 ~~g~~~~~~l~~~Did~~v~H---Qan~~ii~~~~~~l~~ 263 (354)
..+ .+++|.|.++.- +.+.+|+++++++-|+
T Consensus 220 d~~------~~~~~yDli~tGDlg~vG~~i~~~ll~~~g~ 253 (337)
T PRK08304 220 DTG------RSPEDYDLIVTGDLGRVGREILKELLKEEGY 253 (337)
T ss_pred HcC------CChhhccEEEEcchHHHHHHHHHHHHHHhCC
Confidence 667 999999999874 3445566666666664
No 45
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=99.64 E-value=1.4e-14 Score=143.68 Aligned_cols=173 Identities=14% Similarity=0.112 Sum_probs=118.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCccE----EEEeeccCCC--------------------------CCCcHHHHHHHHhc
Q 018515 52 DVISMSLTAVTNLLEKYKIDPKQIGR----LEVGSETVID--------------------------KSKSIKTFLMQIFE 101 (354)
Q Consensus 52 ~~~~La~~Aa~~aL~~agi~~~dId~----lI~aT~t~~~--------------------------~~p~~a~~v~~~LG 101 (354)
....|+.+|+++||+++|+++++||. ++++|.++.. ..+..+.+|+..||
T Consensus 70 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 149 (406)
T cd00834 70 RFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLG 149 (406)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhC
Confidence 35679999999999999999877664 5566544321 12457889999999
Q ss_pred CCCCCCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeecccc--c---------------------C----CC
Q 018515 102 KFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV--Y---------------------A----EG 154 (354)
Q Consensus 102 l~g~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~~--~---------------------~----~~ 154 (354)
++ .+++.++.+|+++++||..|..+|++|.+ +++||+++|... + . .+
T Consensus 150 l~----g~~~~v~~acas~~~Al~~A~~~i~~G~~--d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~~p~~~~~pf~~~ 223 (406)
T cd00834 150 LR----GPNYTVSTACASGAHAIGDAARLIRLGRA--DVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKD 223 (406)
T ss_pred CC----CcccccchHHHHHHHHHHHHHHHHHcCCC--CEEEEcCcccccCHHHHHHHHhcCCcCCCCCCCccCCCCCCCC
Confidence 93 35788999999999999999999999966 999999998742 0 0 01
Q ss_pred CCCCcccceeEEEEeccCCC-------ceeeeccccccccccccccccCCCCCccccCCcchHHHHHHHHHHHHHHHHHH
Q 018515 155 PARPTGGAAAVVMLVGPDAP-------VAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSK 227 (354)
Q Consensus 155 ~~~~~~GDGAaA~ll~~~~~-------~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~dg~~~~~~~~~~~~~~i~~~l~~ 227 (354)
...+++||||+|+||++.+. +.......+...+ .... ..+..++ +...+++++++++
T Consensus 224 ~~g~~~geGA~a~vL~~~~~A~~~g~~~~a~i~g~~~~~d----~~~~----~~~~~~~--------~~~~~~i~~al~~ 287 (406)
T cd00834 224 RDGFVLGEGAGVLVLESLEHAKARGAKIYAEILGYGASSD----AYHI----TAPDPDG--------EGAARAMRAALAD 287 (406)
T ss_pred CCCEeeeccEEEEEEecHHHHHHCCCeEEEEEEEEEeccc----CCCC----CCCCCCc--------HHHHHHHHHHHHH
Confidence 12467899999999986421 1111101111110 0000 0010011 3445788899999
Q ss_pred hhchhCCCCCccccceecccCCchH
Q 018515 228 YEKLEGKQFSLSNADYFVFHSPYNK 252 (354)
Q Consensus 228 ~g~~~~~~l~~~Did~~v~HQan~~ 252 (354)
++ ++++|||++.+|..+..
T Consensus 288 ag------i~~~dId~v~~h~tgt~ 306 (406)
T cd00834 288 AG------LSPEDIDYINAHGTSTP 306 (406)
T ss_pred cC------CCHHHCCEEecccccCc
Confidence 88 99999999999976554
No 46
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=99.54 E-value=6.1e-14 Score=140.09 Aligned_cols=170 Identities=16% Similarity=0.130 Sum_probs=118.4
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcc----EEEEeeccCCCC-------------------CCcHHHHHHHHhcCCCCCCee
Q 018515 53 VISMSLTAVTNLLEKYKIDPKQIG----RLEVGSETVIDK-------------------SKSIKTFLMQIFEKFGNTDIE 109 (354)
Q Consensus 53 ~~~La~~Aa~~aL~~agi~~~dId----~lI~aT~t~~~~-------------------~p~~a~~v~~~LGl~g~~~~~ 109 (354)
...|+.+|+++||+++|+++++|| .|++++.++++. .+..+..|+..+|++| +
T Consensus 87 ~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~g----~ 162 (424)
T smart00825 87 QQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLRG----P 162 (424)
T ss_pred HHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCCCC----C
Confidence 345999999999999999999999 888888665442 3456778999999932 5
Q ss_pred EEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeecccc------------c-CC---------CCCCCcccceeEEE
Q 018515 110 GVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV------------Y-AE---------GPARPTGGAAAVVM 167 (354)
Q Consensus 110 a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~~------------~-~~---------~~~~~~~GDGAaA~ 167 (354)
++.++.+|++++.||..|..+|++|.+ +.+||+++|... + .+ ....+++||||+|+
T Consensus 163 ~~~v~~acasg~~Al~~A~~~I~~G~~--d~vlvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~~g~~~geGAaal 240 (424)
T smart00825 163 SVTVDTACSSSLVALHLACQSLRSGEC--DMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDADADGYVRGEGVGVV 240 (424)
T ss_pred ccccccHhHHHHHHHHHHHHHHHcCCC--CeeEEeeeeecCCHHHHHHHhhcCCCCCCCCCCCCCCCCCcccccceEEEE
Confidence 788999999999999999999999966 999999998621 0 00 11246789999999
Q ss_pred EeccCC-----C--ceeeeccccccccccccccccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHhhchhCCCCCccc
Q 018515 168 LVGPDA-----P--VAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSN 240 (354)
Q Consensus 168 ll~~~~-----~--~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~dg~~~~~~~~~~~~~~i~~~l~~~g~~~~~~l~~~D 240 (354)
||++.. . +... ..|..... +.... +. ...+ ......+++++|++++ ++++|
T Consensus 241 VLe~~e~A~~~g~~i~a~--I~g~~~~~--~~~~~--~~--~~~~--------~~~~~~a~~~al~~Ag------l~~~d 298 (424)
T smart00825 241 VLKRLSDALRDGDPILAV--IRGSAVNQ--DGRSN--GL--TAPS--------GPAQARLIRQALARAG------VDPAD 298 (424)
T ss_pred EEccHHHHHHCCCeEEEE--EEEEEEeC--CCCCC--CC--CCcC--------HHHHHHHHHHHHHHhC------CCHHH
Confidence 998632 1 1101 01111000 00000 00 0001 1234567888999999 99999
Q ss_pred cceecccCCc
Q 018515 241 ADYFVFHSPY 250 (354)
Q Consensus 241 id~~v~HQan 250 (354)
||++.+|-.+
T Consensus 299 Id~i~~h~tg 308 (424)
T smart00825 299 VDYVEAHGTG 308 (424)
T ss_pred ccEEEeeCCC
Confidence 9999999433
No 47
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=99.53 E-value=7.2e-13 Score=130.41 Aligned_cols=94 Identities=15% Similarity=0.113 Sum_probs=85.6
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHH
Q 018515 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN 129 (354)
Q Consensus 50 ~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~ 129 (354)
+.+..+|+.+|+++||+++|+++++||.+++++..+....|..+..++..||+ +.+++++++.+|++++.++..|..
T Consensus 13 ~~~~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl---~~~~~~~v~~~c~sg~~al~~Aa~ 89 (375)
T cd00829 13 DRSPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGL---LGKPATRVEAAGASGSAAVRAAAA 89 (375)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCC---CCcceeeEeCccHHHHHHHHHHHH
Confidence 67899999999999999999999999999999876655456788999999999 478899999999999999999999
Q ss_pred HHHcCCCCCCEEEEEeecc
Q 018515 130 WVESSSWDGRYGLVVCTDS 148 (354)
Q Consensus 130 ~i~sg~~~~~~vLVV~~e~ 148 (354)
+|++|.+ +.|||+++|.
T Consensus 90 ~I~sG~~--~~vlv~g~e~ 106 (375)
T cd00829 90 AIASGLA--DVVLVVGAEK 106 (375)
T ss_pred HHHhCCC--CEEEEEEEee
Confidence 9999965 9999999986
No 48
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=99.52 E-value=7e-13 Score=131.37 Aligned_cols=95 Identities=21% Similarity=0.139 Sum_probs=84.4
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCC--CCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHH
Q 018515 49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDK--SKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFN 126 (354)
Q Consensus 49 ~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~--~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~ 126 (354)
.+++..+|+.+|+++||+++|+++++||.||+++.+++.. .|..+..++..||+ +..++++++.+|++++.+|..
T Consensus 18 ~~~~~~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl---~~~~~~~v~~aCasg~~ai~~ 94 (389)
T PRK06064 18 WDVSLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGL---APIPATRVEAACASGGAALRQ 94 (389)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCC---CCCCeeEEeCCcHHHHHHHHH
Confidence 3568899999999999999999999999999988765553 36678899999999 467889999999999999999
Q ss_pred HHHHHHcCCCCCCEEEEEeecc
Q 018515 127 CVNWVESSSWDGRYGLVVCTDS 148 (354)
Q Consensus 127 A~~~i~sg~~~~~~vLVV~~e~ 148 (354)
|..+|++|.+ ++|||+++|.
T Consensus 95 A~~~I~sG~~--~~vLv~G~e~ 114 (389)
T PRK06064 95 AYLAVASGEA--DVVLAAGVEK 114 (389)
T ss_pred HHHHHHCCCC--CEEEEEEEEe
Confidence 9999999966 9999999985
No 49
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.50 E-value=7.5e-14 Score=138.19 Aligned_cols=97 Identities=10% Similarity=0.126 Sum_probs=88.0
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHH
Q 018515 49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV 128 (354)
Q Consensus 49 ~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~ 128 (354)
++++..+|+.+|+++||+++|++++|||.||++|.++++..|..+..++..||+ +.++++|||+++|++++++|.+|.
T Consensus 18 ~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl--~~~~~~~~v~~~c~s~~~al~~A~ 95 (386)
T cd00751 18 KDVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGL--PESVPATTVNRVCGSGLQAVALAA 95 (386)
T ss_pred CCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCC--CCCCchhhhccccHHHHHHHHHHH
Confidence 468899999999999999999999999999999877766677888889999999 335889999999999999999999
Q ss_pred HHHHcCCCCCCEEEEEeeccc
Q 018515 129 NWVESSSWDGRYGLVVCTDSA 149 (354)
Q Consensus 129 ~~i~sg~~~~~~vLVV~~e~~ 149 (354)
.+|++|.+ ++|||+++|..
T Consensus 96 ~~I~sG~~--~~vLv~g~e~~ 114 (386)
T cd00751 96 QSIAAGEA--DVVVAGGVESM 114 (386)
T ss_pred HHHHCCCC--CeEEEeeeecc
Confidence 99999966 99999999974
No 50
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.48 E-value=2.6e-12 Score=128.77 Aligned_cols=227 Identities=14% Similarity=0.079 Sum_probs=136.5
Q ss_pred ceeEEeEEEEecCCccccHHHHHHhh--CCC-----cc----hhhhcc-cceeEeecCC-----CCCHHHHHHHHHHHHH
Q 018515 3 KNVGILAMDIYFPPTCVQQEALEAHD--GAS-----KG----KYTIGL-GQECMAFCSE-----VEDVISMSLTAVTNLL 65 (354)
Q Consensus 3 ~~v~I~~ig~ylP~~~v~~~el~~~~--g~~-----~~----~i~~~~-Gi~~r~~~~~-----~e~~~~La~~Aa~~aL 65 (354)
+.|.|+|+|...|--. +-+++-+.+ |.+ +. .+..++ |.- .+..+ ......|+..|+++||
T Consensus 11 ~~VvITG~G~vs~~G~-~~~~~~~~L~~G~s~i~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~aa~~Al 87 (425)
T PRK06501 11 PIVAVTGMGVVTSLGQ-GKADNWAALTAGESGIHTITRFPTEGLRTRIAGTV--DFLPESPFGASALSEALARLAAEEAL 87 (425)
T ss_pred cCEEEEeeeEECCCCC-CHHHHHHHHHcCCCceEcCCcccccCCCCceEEEE--eecccccccccCHHHHHHHHHHHHHH
Confidence 4699999999998754 455544332 221 01 111111 110 01110 1124568999999999
Q ss_pred HHcCCCcCCcc------------------EEEEeec---------------cCCC-------CCCcHHHHHHHHhcCCCC
Q 018515 66 EKYKIDPKQIG------------------RLEVGSE---------------TVID-------KSKSIKTFLMQIFEKFGN 105 (354)
Q Consensus 66 ~~agi~~~dId------------------~lI~aT~---------------t~~~-------~~p~~a~~v~~~LGl~g~ 105 (354)
+++|+++.+++ .++.++. ++.. ..|+++.+|+..+|++
T Consensus 88 ~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl~-- 165 (425)
T PRK06501 88 AQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERFQFGSIADRLADRFGTR-- 165 (425)
T ss_pred HHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhhcccHHHHHHHHHhCCC--
Confidence 99999654422 1122221 1111 2356889999999993
Q ss_pred CCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeeccc---------------c-cC-----------CCCCCC
Q 018515 106 TDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA---------------V-YA-----------EGPARP 158 (354)
Q Consensus 106 ~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~---------------~-~~-----------~~~~~~ 158 (354)
.++|+++.+|+|+++||..|.++|++|.+ +++||+++|.. + .. .+...+
T Consensus 166 --G~~~~i~~aCaS~~~Al~~A~~~I~~G~~--d~vlvgG~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~r~G~ 241 (425)
T PRK06501 166 --GLPISLSTACASGATAIQLGVEAIRRGET--DRALCIATDGSVSAEALIRFSLLSALSTQNDPPEKASKPFSKDRDGF 241 (425)
T ss_pred --CCceeecCccHHHHHHHHHHHHHHHcCCC--CEEEEeeecccCCHHHHHHHHHhhccccCCCCCCcccCCCCCCCCCe
Confidence 34699999999999999999999999966 99999999931 1 01 111246
Q ss_pred cccceeEEEEeccCC-----C--c-eeeeccccccccccccccccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHhhc
Q 018515 159 TGGAAAVVMLVGPDA-----P--V-AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEK 230 (354)
Q Consensus 159 ~~GDGAaA~ll~~~~-----~--~-~~~~~~~g~~~~~~~~~~~p~~~~~~~~~dg~~~~~~~~~~~~~~i~~~l~~~g~ 230 (354)
++||||+|+||++.. + + ....+. +...+. ... ..+..++ ..+.++++++|++++
T Consensus 242 v~GEGaaalVLe~~~~A~~rg~~i~a~i~g~-~~~~d~----~~~----~~~~~~~--------~~~~~ai~~AL~~ag- 303 (425)
T PRK06501 242 VMAEGAGALVLESLESAVARGAKILGIVAGC-GEKADS----FHR----TRSSPDG--------SPAIGAIRAALADAG- 303 (425)
T ss_pred eeeccEEEEEECcHHHHHHCCCeEEEEEEEE-EEccCC----CCC----CCCCCCH--------HHHHHHHHHHHHHcC-
Confidence 789999999998632 1 1 111111 100000 000 0011121 235678889999988
Q ss_pred hhCCCCCccccceecccCCchHHHHHHHHHhh
Q 018515 231 LEGKQFSLSNADYFVFHSPYNKLVQKSFARLL 262 (354)
Q Consensus 231 ~~~~~l~~~Did~~v~HQan~~ii~~~~~~l~ 262 (354)
++++||||+.+|-.+.. .....+...
T Consensus 304 -----i~p~dId~i~~Hgtgt~-~~d~~E~~a 329 (425)
T PRK06501 304 -----LTPEQIDYINAHGTSTP-ENDKMEYLG 329 (425)
T ss_pred -----CCHHHcCEEEecCccCc-chHHHHHHH
Confidence 99999999999955444 333444444
No 51
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=99.44 E-value=4.9e-13 Score=132.37 Aligned_cols=96 Identities=13% Similarity=0.167 Sum_probs=87.0
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHH
Q 018515 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN 129 (354)
Q Consensus 50 ~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~ 129 (354)
+++..+|+.+|+++||+++|++++|||.||++|.++++..|..+..++..+|+ +.++++|+++.+|++++++|..|.+
T Consensus 18 ~~t~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl--~~~~~~~~v~~~Casg~~al~~A~~ 95 (386)
T TIGR01930 18 DVSAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGL--PESVPAYTVNRQCASGLQAVILAAQ 95 (386)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCC--CCCceeeeecchhhHHHHHHHHHHH
Confidence 58899999999999999999999999999999877666557778889999999 4458899999999999999999999
Q ss_pred HHHcCCCCCCEEEEEeeccc
Q 018515 130 WVESSSWDGRYGLVVCTDSA 149 (354)
Q Consensus 130 ~i~sg~~~~~~vLVV~~e~~ 149 (354)
+|++|.+ ++|||+++|..
T Consensus 96 ~I~sG~~--~~vLv~g~e~~ 113 (386)
T TIGR01930 96 LIRAGEA--DVVVAGGVESM 113 (386)
T ss_pred HHHCCCC--CEEEEEEehhh
Confidence 9999966 99999999973
No 52
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=99.43 E-value=1.3e-12 Score=130.00 Aligned_cols=170 Identities=15% Similarity=0.100 Sum_probs=117.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCccE----EEEeeccCCC-------------------CCCcHHHHHHHHhcCCCCCCee
Q 018515 53 VISMSLTAVTNLLEKYKIDPKQIGR----LEVGSETVID-------------------KSKSIKTFLMQIFEKFGNTDIE 109 (354)
Q Consensus 53 ~~~La~~Aa~~aL~~agi~~~dId~----lI~aT~t~~~-------------------~~p~~a~~v~~~LGl~g~~~~~ 109 (354)
...|+.+|+++||+++|+++++++. +++++.++++ ..+..+..++..+|+. .+
T Consensus 87 ~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl~----g~ 162 (421)
T cd00833 87 QQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLR----GP 162 (421)
T ss_pred HHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCCC----CC
Confidence 4679999999999999999988875 7777754432 1134677899999993 25
Q ss_pred EEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeecccc-------------------cC---CCCCCCcccceeEEE
Q 018515 110 GVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-------------------YA---EGPARPTGGAAAVVM 167 (354)
Q Consensus 110 a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~~-------------------~~---~~~~~~~~GDGAaA~ 167 (354)
++.+..+|++++.||..|..+|++|.+ +.+||+++|... .. .....+++||||+|+
T Consensus 163 ~~~v~~acas~~~Al~~A~~~I~~G~~--d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~~g~~~geGAaal 240 (421)
T cd00833 163 SLTVDTACSSSLVALHLACQSLRSGEC--DLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDADADGYVRGEGVGVV 240 (421)
T ss_pred ceeeccHhHHHHHHHHHHHHHHHcCCC--CeeEEeeeeccCCHHHHHHHhhCCCCCCCCCCCCCCCCCCCeeeeceEEEE
Confidence 788999999999999999999999966 999999999731 00 011246789999999
Q ss_pred EeccCCC-------ceeeeccccccccccccccccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHhhchhCCCCCccc
Q 018515 168 LVGPDAP-------VAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSN 240 (354)
Q Consensus 168 ll~~~~~-------~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~dg~~~~~~~~~~~~~~i~~~l~~~g~~~~~~l~~~D 240 (354)
||++.+. +... ..|.... .+... .. .... .......++++++++++ ++++|
T Consensus 241 vL~~~~~A~~~g~~~~a~--i~g~~~~--~~~~~----~~--~~~p------~~~~~~~a~~~al~~Ag------i~~~d 298 (421)
T cd00833 241 VLKRLSDALRDGDRIYAV--IRGSAVN--QDGRT----KG--ITAP------SGEAQAALIRRAYARAG------VDPSD 298 (421)
T ss_pred EEeeHHHHHHCCCeEEEE--EEEEEEc--CCCCC----CC--CcCC------CHHHHHHHHHHHHHHhC------CCHHH
Confidence 9986321 1101 0111100 00000 00 0000 12344578889999999 99999
Q ss_pred cceecccCCc
Q 018515 241 ADYFVFHSPY 250 (354)
Q Consensus 241 id~~v~HQan 250 (354)
||++.+|-.+
T Consensus 299 id~i~~hgtg 308 (421)
T cd00833 299 IDYVEAHGTG 308 (421)
T ss_pred CcEEEeeCCC
Confidence 9999999544
No 53
>PRK12404 stage V sporulation protein AD; Provisional
Probab=99.43 E-value=2.4e-12 Score=122.04 Aligned_cols=222 Identities=14% Similarity=0.072 Sum_probs=135.5
Q ss_pred ceeEEeEEEEecCCccccHHHHHHhhCCCcchhhhcccceeEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEee
Q 018515 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGS 82 (354)
Q Consensus 3 ~~v~I~~ig~ylP~~~v~~~el~~~~g~~~~~i~~~~Gi~~r~~~~~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT 82 (354)
.++.|.+.++.+-+.. -+--|...++.-.+.. ..|.++ ++..-.+|+.+|+++||+++|++++|||++++++
T Consensus 12 ~~p~i~~~~~v~G~~E-~~Gpl~~~FD~~~~d~--~~g~~s-----wEkAE~~L~~EA~~~AL~kAGI~~~DID~i~vGd 83 (334)
T PRK12404 12 NKPVIISTGVVGGPFE-AKGPLAEDFDLLHEDL--WLGQDS-----YEKAERKLLEEACSRAIEKAKLRKEDIQFFLAGD 83 (334)
T ss_pred CCCEEEEEEEEeCCcc-cCCCChhhCCeeeccc--ccCCcc-----hHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 3577888888776543 1122333333211111 123221 2345678999999999999999999999999998
Q ss_pred ccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeecc-c------ccCCC-
Q 018515 83 ETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDS-A------VYAEG- 154 (354)
Q Consensus 83 ~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~-~------~~~~~- 154 (354)
.+ .+..|+ ..+++.||+ | .|++.++|+++.+||.+|..+|++|.+ ++||++++-- + +|...
T Consensus 84 L~-nQ~ips--sfvar~LGI---P---~~gV~gACSTg~eAL~lAa~~VaSG~A--d~VLavtsSH~~~aErqfR~P~ey 152 (334)
T PRK12404 84 LM-NQITPT--SFAARTLGI---P---YLGLFGACSTSMEGLALAALIVNSGGA--KYVLTGASSHNAAVEKQFRYPTEY 152 (334)
T ss_pred cC-CCcCcH--HHHHHHhCC---C---ccceeecCHHHHHHHHHHHHHHHcCCC--CEEEEEeCcccchhhhhccCcccc
Confidence 77 444555 499999998 4 389999999999999999999999965 9999998643 1 33321
Q ss_pred ----C-CCCcccceeEEEEeccCC-CceeeeccccccccccccccccCCCCCccccCCcchHHHH-HHHHHHHHHHHHHH
Q 018515 155 ----P-ARPTGGAAAVVMLVGPDA-PVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCY-LMALDTCYKCLCSK 227 (354)
Q Consensus 155 ----~-~~~~~GDGAaA~ll~~~~-~~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~dg~~~~~~~-~~~~~~~i~~~l~~ 227 (354)
+ +....-=||+|+||++.. ...+..-+.|.-.+ +...+|. | |-.. ..+-...|..-++.
T Consensus 153 G~Qrp~taqwTvTgaga~~l~~~~~~~~i~~~T~Gkv~D--~g~~d~~--------n----MGaaMAPAA~dti~~h~~d 218 (334)
T PRK12404 153 GGQKPPTAQWTVTGAGAAILSKTGDGPRVTSATIGRVVD--MGLTDPF--------N----MGGAMAPAAVDTIEAHLRD 218 (334)
T ss_pred cCcCCCcccEEEEceEEEEEecCCCCceEEEEEEEEEEe--cCCCCcc--------c----chhhhhHHHHHHHHHHHHH
Confidence 1 122223355567887643 21111112332211 1112221 1 1111 12222445566666
Q ss_pred hhchhCCCCCccccceecccC---CchHHHHHHHHHhhh
Q 018515 228 YEKLEGKQFSLSNADYFVFHS---PYNKLVQKSFARLLF 263 (354)
Q Consensus 228 ~g~~~~~~l~~~Did~~v~HQ---an~~ii~~~~~~l~~ 263 (354)
.+ .+++|.|.++.-- .+.+|+++++++-|+
T Consensus 219 ~~------~~~~~yDlI~TGDLg~vG~~i~~~ll~~~g~ 251 (334)
T PRK12404 219 RQ------IDASYYDLIVTGDLGHVGREIAKDLLHKHGV 251 (334)
T ss_pred hC------CChhhccEEEEcchHHHHHHHHHHHHHHcCC
Confidence 67 9999999998743 444556666655554
No 54
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=99.42 E-value=1.2e-12 Score=129.90 Aligned_cols=98 Identities=11% Similarity=0.126 Sum_probs=87.6
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHH
Q 018515 49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV 128 (354)
Q Consensus 49 ~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~ 128 (354)
.++++.+|+.+|+++||+++|++|+|||.||+++.++....+..+..++..+|+ +..+++|+|+.+|++|++++.+|.
T Consensus 22 ~~~~~~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl--~~~~p~~~V~~~Casg~~ai~~A~ 99 (393)
T PRK05656 22 ANIPAVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGL--PHSVPAMTLNKVCGSGLKALHLAA 99 (393)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCC--CCCcceEEecccchhHHHHHHHHH
Confidence 357899999999999999999999999999999887654456678889999999 434899999999999999999999
Q ss_pred HHHHcCCCCCCEEEEEeecccc
Q 018515 129 NWVESSSWDGRYGLVVCTDSAV 150 (354)
Q Consensus 129 ~~i~sg~~~~~~vLVV~~e~~~ 150 (354)
.+|++|.+ +.+||+++|..+
T Consensus 100 ~~I~sG~~--d~vLv~G~E~ms 119 (393)
T PRK05656 100 QAIRCGDA--EVIIAGGQENMS 119 (393)
T ss_pred HHHHcCCC--CEEEEEEEhhhc
Confidence 99999966 999999999854
No 55
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=99.40 E-value=1.5e-12 Score=129.08 Aligned_cols=98 Identities=12% Similarity=0.137 Sum_probs=89.2
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCc-HHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHH
Q 018515 49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKS-IKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC 127 (354)
Q Consensus 49 ~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~-~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A 127 (354)
.++++.+|+.+|+++||+++|++|++||.||+++.+++...|+ .+..++..+|+ +.++++|+|+.+|+|+++||.+|
T Consensus 23 ~~~~~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl--~~~~p~~~V~~aCaSg~~Al~~A 100 (392)
T PRK07108 23 NMTHGATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGL--PVTVPGMTVNRFCSSGLQTIALA 100 (392)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCC--CCCCceeeecchhhHHHHHHHHH
Confidence 4678999999999999999999999999999999887776565 78899999999 45699999999999999999999
Q ss_pred HHHHHcCCCCCCEEEEEeecccc
Q 018515 128 VNWVESSSWDGRYGLVVCTDSAV 150 (354)
Q Consensus 128 ~~~i~sg~~~~~~vLVV~~e~~~ 150 (354)
..+|++|.+ +.+|+++.|..+
T Consensus 101 ~~~I~sG~~--d~vlagGvE~ms 121 (392)
T PRK07108 101 AQRVIAGEG--DVFVAGGVESIS 121 (392)
T ss_pred HHHHHCCCC--CEEEEEEEeccC
Confidence 999999966 999999999864
No 56
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways. The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....
Probab=99.38 E-value=3.6e-13 Score=103.84 Aligned_cols=60 Identities=23% Similarity=0.207 Sum_probs=49.1
Q ss_pred EeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeecccc-cCCC---CCCCcccceeEEEEeccC
Q 018515 111 VDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-YAEG---PARPTGGAAAVVMLVGPD 172 (354)
Q Consensus 111 ~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~~-~~~~---~~~~~~GDGAaA~ll~~~ 172 (354)
|||+++|+||++||++|..++++|.+ ++||||++|..+ +.+. ...++|||||+|+||+++
T Consensus 1 fDi~~~C~g~~~al~~A~~~i~~g~~--~~~Lvv~~d~~s~~~~~~~~~~~~~~gDgAaA~vl~~~ 64 (80)
T PF08545_consen 1 FDINQACAGFLYALDVAAALIASGRA--KNALVVGGDRLSRIVDRTDRQTAFIFGDGAAAVVLSRD 64 (80)
T ss_dssp EEEE-GGGHHHHHHHHHHHHHHTTS---SEEEEEEEEEGGGGSHTTHHHHHTTB-EEEEEEEEEEE
T ss_pred CcccccchHHHHHHHHHHHHHhhccC--CEEEEEeeccccccccccccCcceeecchheEEEEEec
Confidence 89999999999999999999999955 999999999953 2222 135789999999999985
No 57
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=99.38 E-value=8.5e-12 Score=124.05 Aligned_cols=172 Identities=15% Similarity=0.119 Sum_probs=114.5
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCC-cc----EEEEeeccCC----------------------CCC--CcHHHHHHHHhcC
Q 018515 52 DVISMSLTAVTNLLEKYKIDPKQ-IG----RLEVGSETVI----------------------DKS--KSIKTFLMQIFEK 102 (354)
Q Consensus 52 ~~~~La~~Aa~~aL~~agi~~~d-Id----~lI~aT~t~~----------------------~~~--p~~a~~v~~~LGl 102 (354)
....|+..|+++||+++|+++++ ++ .++++|..+. ... ...+..|...+|+
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T cd00828 71 RTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLS 150 (407)
T ss_pred HHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhCc
Confidence 45679999999999999998766 33 2445543221 111 3467889999999
Q ss_pred -CCCCCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeecccc------c------C-----------C---CC
Q 018515 103 -FGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV------Y------A-----------E---GP 155 (354)
Q Consensus 103 -~g~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~~------~------~-----------~---~~ 155 (354)
+| +++.+..+|+++++||..|..+|++|.+ +.+||.++|... + . + +.
T Consensus 151 ~~G----p~~tv~~aCaS~~~Al~~A~~~I~~G~~--d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~~~~~~pfd~~~ 224 (407)
T cd00828 151 SHG----PIKTPVGACATALEALDLAVEAIRSGKA--DIVVVGGVEDPLEEGLSGFANMGALSTAEEEPEEMSRPFDETR 224 (407)
T ss_pred CCC----CCcCcccHHHHHHHHHHHHHHHHHcCCC--CEEEEccccccChHHHHHHHHcCCCCCCCCCCCcccCCCcCCC
Confidence 54 3677999999999999999999999966 999999999732 0 0 0 01
Q ss_pred CCCcccceeEEEEeccCC-------CceeeeccccccccccccccccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHh
Q 018515 156 ARPTGGAAAVVMLVGPDA-------PVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKY 228 (354)
Q Consensus 156 ~~~~~GDGAaA~ll~~~~-------~~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~dg~~~~~~~~~~~~~~i~~~l~~~ 228 (354)
..+++||||+++||++.+ .+.-. ..|.... ..+. ....+. + .+...++++++++++
T Consensus 225 ~G~~~gEGAaalvLe~~~~A~~rg~~i~a~--i~g~~~~-----~d~~-~~~~~~-~--------~~~~~~a~~~Al~~A 287 (407)
T cd00828 225 DGFVEAEGAGVLVLERAELALARGAPIYGR--VAGTAST-----TDGA-GRSVPA-G--------GKGIARAIRTALAKA 287 (407)
T ss_pred CcEEeecceEEEEEeeHHHHHHCCCeEEEE--EEEEEec-----cCCC-CCCCCC-C--------hHHHHHHHHHHHHHc
Confidence 236679999999998632 11101 0111100 0000 000000 1 134567888999999
Q ss_pred hchhCCCCCccccceecccCCchH
Q 018515 229 EKLEGKQFSLSNADYFVFHSPYNK 252 (354)
Q Consensus 229 g~~~~~~l~~~Did~~v~HQan~~ 252 (354)
+ ++++||||+..|-.+..
T Consensus 288 g------i~~~dId~i~~hgtgt~ 305 (407)
T cd00828 288 G------LSLDDLDVISAHGTSTP 305 (407)
T ss_pred C------CCHHHcCEEecccccCc
Confidence 9 99999999999955543
No 58
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=99.37 E-value=4.4e-12 Score=125.58 Aligned_cols=96 Identities=16% Similarity=0.119 Sum_probs=84.0
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHH
Q 018515 49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV 128 (354)
Q Consensus 49 ~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~ 128 (354)
++++..+|+++|+++||+++|++++|||.||+++.++....+..+..++..||+ +...+++++.+|++++.+|..|.
T Consensus 17 ~~~~~~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl---~~~~~~~v~~~casg~~al~~A~ 93 (385)
T PRK12578 17 DDVSVQELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGL---TGKVPLRVEAMCATGLAASLTAY 93 (385)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCC---CCCCeeEEeccCHHHHHHHHHHH
Confidence 467899999999999999999999999999999876543333447889999999 45667999999999999999999
Q ss_pred HHHHcCCCCCCEEEEEeeccc
Q 018515 129 NWVESSSWDGRYGLVVCTDSA 149 (354)
Q Consensus 129 ~~i~sg~~~~~~vLVV~~e~~ 149 (354)
.+|++|.+ ++|||+++|..
T Consensus 94 ~~I~sG~~--~~vLvvg~e~~ 112 (385)
T PRK12578 94 TAVASGLV--DMAIAVGVDKM 112 (385)
T ss_pred HHHHCCCC--CEEEEEEEeec
Confidence 99999965 99999999973
No 59
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=99.36 E-value=3.7e-12 Score=126.41 Aligned_cols=98 Identities=8% Similarity=0.047 Sum_probs=85.2
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHH
Q 018515 49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV 128 (354)
Q Consensus 49 ~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~ 128 (354)
.+++..+|+.+|+++||+++|++|+|||.||+++.++....+..+..++..+|+ +.++++++|+.+|+++++|+..|.
T Consensus 22 ~~~~~~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl--~~~~p~~~V~~~CaSg~~Al~~A~ 99 (393)
T PRK08235 22 KDVKATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGI--PWEVQTETVNKVCASGLRAVTLAD 99 (393)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCC--CCCcceeehhhhhhHHHHHHHHHH
Confidence 367899999999999999999999999999999876522233445577899999 557899999999999999999999
Q ss_pred HHHHcCCCCCCEEEEEeecccc
Q 018515 129 NWVESSSWDGRYGLVVCTDSAV 150 (354)
Q Consensus 129 ~~i~sg~~~~~~vLVV~~e~~~ 150 (354)
.+|++|.+ +.|||+++|..+
T Consensus 100 ~~I~sG~~--d~vLvvG~E~ms 119 (393)
T PRK08235 100 QIIRAGDA--SVIVAGGMESMS 119 (393)
T ss_pred HHHHCCCC--CEEEEEeeeccc
Confidence 99999966 999999999853
No 60
>PRK09051 beta-ketothiolase; Provisional
Probab=99.36 E-value=4.4e-12 Score=125.89 Aligned_cols=98 Identities=12% Similarity=0.135 Sum_probs=85.3
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCC-cHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHH
Q 018515 49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSK-SIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC 127 (354)
Q Consensus 49 ~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p-~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A 127 (354)
.+++..+|+.+|+++||+++|++|+|||.||+++.++....+ ..+..+...+|+ ++++++++|+.+|++|++|+.+|
T Consensus 23 ~~~~~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl--~~~~p~~~V~~aCaSg~~Al~~A 100 (394)
T PRK09051 23 KDVAPTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGV--PQETPAFNVNRLCGSGLQAIVSA 100 (394)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCC--CCCCceEEecccchHHHHHHHHH
Confidence 367899999999999999999999999999999988765433 455566677899 44689999999999999999999
Q ss_pred HHHHHcCCCCCCEEEEEeecccc
Q 018515 128 VNWVESSSWDGRYGLVVCTDSAV 150 (354)
Q Consensus 128 ~~~i~sg~~~~~~vLVV~~e~~~ 150 (354)
..+|++|.+ +.|||+++|..+
T Consensus 101 ~~~I~sG~~--d~vLvvG~E~mS 121 (394)
T PRK09051 101 AQAILLGDA--DVAIGGGAESMS 121 (394)
T ss_pred HHHHHcCCC--CEEEEEeehhcc
Confidence 999999966 999999999853
No 61
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=99.35 E-value=3.6e-12 Score=126.96 Aligned_cols=97 Identities=15% Similarity=0.161 Sum_probs=88.9
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHH
Q 018515 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN 129 (354)
Q Consensus 50 ~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~ 129 (354)
+++..+|+.+|+++||+++|++++|||.||+++.++....|..+..++..+|+ +.++++++|+.+|++++.++.+|.+
T Consensus 23 ~~~~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl--~~~~p~~~V~~~CaSg~~Al~~A~~ 100 (404)
T PRK06205 23 DVPAEELAATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGL--PVTVPGMQLDRRCGSGLQAVITAAM 100 (404)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCC--CCCCceeehhhhhhHHHHHHHHHHH
Confidence 57899999999999999999999999999999988777677888889999999 4468899999999999999999999
Q ss_pred HHHcCCCCCCEEEEEeecccc
Q 018515 130 WVESSSWDGRYGLVVCTDSAV 150 (354)
Q Consensus 130 ~i~sg~~~~~~vLVV~~e~~~ 150 (354)
+|++|.+ +.|||+++|..+
T Consensus 101 ~I~sG~~--d~vLv~G~E~ms 119 (404)
T PRK06205 101 QVQTGAA--DVVIAGGAESMS 119 (404)
T ss_pred HHHcCCC--CEEEEeeehhhc
Confidence 9999966 999999999853
No 62
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=99.35 E-value=4.4e-12 Score=125.59 Aligned_cols=94 Identities=16% Similarity=0.091 Sum_probs=81.1
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCC--CcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHH
Q 018515 49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKS--KSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFN 126 (354)
Q Consensus 49 ~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~--p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~ 126 (354)
++++..+|+++|+++||+++|++++|||.||++| ++++.. +..+..+++.||+ ...++++++++|+++..++..
T Consensus 20 ~~~s~~eL~~eAa~~Al~dAgl~~~dID~iv~~~-~~~~~~~~~~~~~~va~~LGl---~~~~~~~v~~~casg~~al~~ 95 (386)
T PRK08313 20 QDVSMAGLVREAIDRALADAGLTWDDIDAVVVGK-APDFFEGVMMPELFLADALGA---TGKPLIRVHTAGSVGGSTAVV 95 (386)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEec-cccccccccCchHHHHHhcCC---CCCceEEEeccCHHHHHHHHH
Confidence 4678999999999999999999999999999987 444321 1234789999999 456789999999999999999
Q ss_pred HHHHHHcCCCCCCEEEEEeecc
Q 018515 127 CVNWVESSSWDGRYGLVVCTDS 148 (354)
Q Consensus 127 A~~~i~sg~~~~~~vLVV~~e~ 148 (354)
|..+|++|.+ ++||||++|.
T Consensus 96 A~~~I~sG~~--~~vLVvg~e~ 115 (386)
T PRK08313 96 AASLVQSGVY--RRVLAVAWEK 115 (386)
T ss_pred HHHHHHCCCC--CEEEEEEEEE
Confidence 9999999966 9999999884
No 63
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=99.33 E-value=7.2e-12 Score=124.49 Aligned_cols=97 Identities=12% Similarity=0.098 Sum_probs=83.9
Q ss_pred CCCHHHHHHHHHHHHHHHc-CCCcCCccEEEEeeccCCCCCCcHHHHH-HHHhcCCCCCCeeEEeecCcChHHHHHHHHH
Q 018515 50 VEDVISMSLTAVTNLLEKY-KIDPKQIGRLEVGSETVIDKSKSIKTFL-MQIFEKFGNTDIEGVDSTNACYGGTAALFNC 127 (354)
Q Consensus 50 ~e~~~~La~~Aa~~aL~~a-gi~~~dId~lI~aT~t~~~~~p~~a~~v-~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A 127 (354)
+++..+|+.+|+++||+++ |++++|||.||+++.+++...|+....+ ...+|+ +..+++++|+.+|++|++|+..|
T Consensus 28 ~~s~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~Gl--~~~~p~~~V~~aCaSg~~Al~~A 105 (399)
T PRK09052 28 NTRPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGL--PNSVGGVTVNRFCASGLQAVAMA 105 (399)
T ss_pred CCCHHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcCC--CCCCceeeecchhhHHHHHHHHH
Confidence 5788999999999999997 9999999999999888766555555554 455699 43589999999999999999999
Q ss_pred HHHHHcCCCCCCEEEEEeecccc
Q 018515 128 VNWVESSSWDGRYGLVVCTDSAV 150 (354)
Q Consensus 128 ~~~i~sg~~~~~~vLVV~~e~~~ 150 (354)
..+|++|.+ +.|||+++|..+
T Consensus 106 ~~~I~sG~~--d~vLv~G~E~mS 126 (399)
T PRK09052 106 ADRIRVGEA--DVMIAAGVESMS 126 (399)
T ss_pred HHHHHCCCC--CEEEEEEEeccc
Confidence 999999966 999999999853
No 64
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=99.32 E-value=9.9e-12 Score=123.46 Aligned_cols=98 Identities=13% Similarity=0.118 Sum_probs=85.2
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCC-CcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHH
Q 018515 49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKS-KSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC 127 (354)
Q Consensus 49 ~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~-p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A 127 (354)
.+.++.+|+++|++++|+++|++|++||.||+++.++.... +..+......+|+ +.++++++|+.+|+||++||.+|
T Consensus 24 ~~~~~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl--~~~~pa~~Vn~aCaSg~~Ai~~A 101 (402)
T PRK08242 24 HEVKPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGL--PETVPGVQINRFCASGLEAVNLA 101 (402)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCC--CCCCCeEEEcchhhhHHHHHHHH
Confidence 35688999999999999999999999999999998875433 3345556677899 56799999999999999999999
Q ss_pred HHHHHcCCCCCCEEEEEeecccc
Q 018515 128 VNWVESSSWDGRYGLVVCTDSAV 150 (354)
Q Consensus 128 ~~~i~sg~~~~~~vLVV~~e~~~ 150 (354)
.++|++|.+ +.+|++++|..+
T Consensus 102 ~~~I~sG~~--d~vLv~G~E~mS 122 (402)
T PRK08242 102 AAKVRSGWD--DLVIAGGVESMS 122 (402)
T ss_pred HHHHHcCCC--CEEEEEEEEccC
Confidence 999999965 999999999854
No 65
>PRK06059 lipid-transfer protein; Provisional
Probab=99.31 E-value=1e-11 Score=123.58 Aligned_cols=95 Identities=16% Similarity=0.102 Sum_probs=83.3
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCC-CCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHH
Q 018515 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDK-SKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV 128 (354)
Q Consensus 50 ~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~-~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~ 128 (354)
+++..+|+++|+++||+++|++++|||.||+++..++.. .|..+..+++.||+ +.+++++++.+|++++.+|..|.
T Consensus 20 ~~~~~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~---~~~~~~~v~~~Casg~~al~~A~ 96 (399)
T PRK06059 20 GRDFVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGW---NGAPVSSSYAACASGSQALQSAR 96 (399)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCC---CCCceecccchhHHHHHHHHHHH
Confidence 467799999999999999999999999999887655433 34567899999999 45778999999999999999999
Q ss_pred HHHHcCCCCCCEEEEEeeccc
Q 018515 129 NWVESSSWDGRYGLVVCTDSA 149 (354)
Q Consensus 129 ~~i~sg~~~~~~vLVV~~e~~ 149 (354)
.+|++|.+ ++|||+++|..
T Consensus 97 ~~I~sG~~--~~vLvvg~e~~ 115 (399)
T PRK06059 97 AQILAGLC--DVALVVGADTT 115 (399)
T ss_pred HHHHCCCC--CEEEEEEEccc
Confidence 99999965 99999999973
No 66
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=99.29 E-value=3.3e-12 Score=100.46 Aligned_cols=64 Identities=20% Similarity=0.240 Sum_probs=50.7
Q ss_pred HHHhhchhCCCCCccccceecccCCchHHHHHHHHHhhhhhhhhccccchhHhhhccCCCCCCCCCccccchhHHHHHHh
Q 018515 225 CSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDLEKVSQQ 304 (354)
Q Consensus 225 l~~~g~~~~~~l~~~Did~~v~HQan~~ii~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (354)
|+++| ++++|||+|++||+|.++++.+.+++++ ++
T Consensus 1 L~~~g------~~~~did~~i~hq~~~~~~~~~~~~lgi------------------------~~--------------- 35 (90)
T PF08541_consen 1 LERAG------LSPDDIDHFIPHQASKKILDSIAKRLGI------------------------PP--------------- 35 (90)
T ss_dssp HHHTT--------GGGESEEEE-SSSHHHHHHHHHHHTS-------------------------G---------------
T ss_pred Ccccc------CCHHHCCEEEeCCCCHHHHHHHHHHcCC------------------------cH---------------
Confidence 46667 9999999999999999999999999985 44
Q ss_pred hhhhHHHhhcccccccccccCccchHHHHHHHHHHhccC
Q 018515 305 LAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIHNK 343 (354)
Q Consensus 305 ~~~~~~~~k~~~~~~~~~~~GN~~saSip~~L~~~l~~~ 343 (354)
+|+..++ ++|||++|||+|+.|+++++++
T Consensus 36 -------~~~~~~~---~~~Gn~~sa~~~~~L~~~~~~g 64 (90)
T PF08541_consen 36 -------ERFPDNL---AEYGNTGSASIPINLADALEEG 64 (90)
T ss_dssp -------GGBE-TH---HHH-B-GGGHHHHHHHHHHHTT
T ss_pred -------HHHHHHH---hccCcchhhhHHHHHHHHHHcC
Confidence 7877665 7999999999999999999964
No 67
>PRK05790 putative acyltransferase; Provisional
Probab=99.28 E-value=2.3e-11 Score=120.78 Aligned_cols=96 Identities=9% Similarity=0.102 Sum_probs=83.0
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHH
Q 018515 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN 129 (354)
Q Consensus 50 ~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~ 129 (354)
+++..+|+.+|+++||+++|++++|||.||+++.++....+..+..++..+|+ +.++++|+++.+|++++++|.+|..
T Consensus 23 ~~~~~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl--~~~~~~~~v~~~Casg~~al~~A~~ 100 (393)
T PRK05790 23 DVSAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGL--PVEVPALTINKVCGSGLKAVALAAQ 100 (393)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCC--CCCCceeeecccchHHHHHHHHHHH
Confidence 58899999999999999999999999999999876543344555557777898 3367899999999999999999999
Q ss_pred HHHcCCCCCCEEEEEeeccc
Q 018515 130 WVESSSWDGRYGLVVCTDSA 149 (354)
Q Consensus 130 ~i~sg~~~~~~vLVV~~e~~ 149 (354)
+|++|.+ ++|||+++|..
T Consensus 101 ~I~sG~~--d~vLv~G~e~~ 118 (393)
T PRK05790 101 AIRAGDA--DIVVAGGQESM 118 (393)
T ss_pred HHHcCCC--CEEEEEeeecc
Confidence 9999966 99999999974
No 68
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=99.27 E-value=2.4e-11 Score=121.87 Aligned_cols=96 Identities=11% Similarity=0.123 Sum_probs=85.4
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHH
Q 018515 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN 129 (354)
Q Consensus 50 ~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~ 129 (354)
+.+..+|+.+|+++||+++|++++|||.||+++.++....+..+..++..+|+ +.++++++++.+|+++++++..|..
T Consensus 24 ~~~~~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl--~~~~p~~~v~~~CaSg~~al~~A~~ 101 (426)
T PRK08170 24 PFSASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGC--GEKVPAWTVQRNCASGMQALDSAAA 101 (426)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCc--CCCceeeeccchhhHHHHHHHHHHH
Confidence 46889999999999999999999999999998776544446678889999999 4468999999999999999999999
Q ss_pred HHHcCCCCCCEEEEEeeccc
Q 018515 130 WVESSSWDGRYGLVVCTDSA 149 (354)
Q Consensus 130 ~i~sg~~~~~~vLVV~~e~~ 149 (354)
+|++|.+ +.|||+++|..
T Consensus 102 ~I~sG~~--d~vLv~G~E~m 119 (426)
T PRK08170 102 NIALGRA--DLVLAGGVEAM 119 (426)
T ss_pred HHHCCCC--CEEEEEEEecc
Confidence 9999966 99999999974
No 69
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.26 E-value=2.7e-11 Score=120.21 Aligned_cols=95 Identities=12% Similarity=0.059 Sum_probs=83.5
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHH-HHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHH
Q 018515 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKT-FLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV 128 (354)
Q Consensus 50 ~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~-~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~ 128 (354)
.+.+.+|+.+|+++||+++|++|++||.||+++.++++..+..+. .+++.+|+ .++++|+|+.+|++|++++.+|.
T Consensus 20 ~~~~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~---~~~p~~~V~~~Casg~~al~~A~ 96 (393)
T cd00826 20 NDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGL---QEAPAIGMNNLCGSGLRALALAM 96 (393)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCC---CCCcEEEecchhHHHHHHHHHHH
Confidence 467799999999999999999999999999998877654455554 36788888 57899999999999999999999
Q ss_pred HHHHcCCCCCCEEEEEeeccc
Q 018515 129 NWVESSSWDGRYGLVVCTDSA 149 (354)
Q Consensus 129 ~~i~sg~~~~~~vLVV~~e~~ 149 (354)
.+|++|.+ +.+||+++|..
T Consensus 97 ~~I~sG~~--~~vlv~g~e~~ 115 (393)
T cd00826 97 QLIAGGDA--NCILAGGFEKM 115 (393)
T ss_pred HHHHCCCC--CEEEEEeeecc
Confidence 99999966 99999999984
No 70
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=99.25 E-value=1.9e-10 Score=114.29 Aligned_cols=171 Identities=16% Similarity=0.140 Sum_probs=113.1
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCccE----EEEeeccCCC-------------------------CCCc-HHHHHHHHhcC
Q 018515 53 VISMSLTAVTNLLEKYKIDPKQIGR----LEVGSETVID-------------------------KSKS-IKTFLMQIFEK 102 (354)
Q Consensus 53 ~~~La~~Aa~~aL~~agi~~~dId~----lI~aT~t~~~-------------------------~~p~-~a~~v~~~LGl 102 (354)
...|+.+|+++||+++|+++++||. ++++|..+.. ..++ .+.+|...+|+
T Consensus 71 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T TIGR03150 71 FIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGA 150 (407)
T ss_pred HHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhCC
Confidence 3579999999999999999999986 6666533211 0111 45678889999
Q ss_pred CCCCCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeeccc-c---------------cCC-----------CC
Q 018515 103 FGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA-V---------------YAE-----------GP 155 (354)
Q Consensus 103 ~g~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~-~---------------~~~-----------~~ 155 (354)
+| +++-+..+|++++.||..|..+|++|.+ +.+||+++|.. . +.+ +.
T Consensus 151 ~g----~~~~v~~acaSg~~Al~~A~~~I~~G~~--d~~lvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~ 224 (407)
T TIGR03150 151 KG----PNHAVVTACATGTHAIGDAFRLIQRGDA--DVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKDR 224 (407)
T ss_pred CC----cccccccHHHHHHHHHHHHHHHHhcCCC--CEEEEecccCcCCHHHHHHHHHhCcccCCCCCCCcCCCCCcCCC
Confidence 43 3566788999999999999999999966 99999999851 0 010 00
Q ss_pred CCCcccceeEEEEeccCC-----C--ceeeeccccccccccccccccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHh
Q 018515 156 ARPTGGAAAVVMLVGPDA-----P--VAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKY 228 (354)
Q Consensus 156 ~~~~~GDGAaA~ll~~~~-----~--~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~dg~~~~~~~~~~~~~~i~~~l~~~ 228 (354)
..++.||||+|+||++.+ + +.... .|.... .+.... ..+..++ ....++++++++++
T Consensus 225 ~g~~~gEGAaalvL~~~~~A~~~g~~i~a~i--~g~~~~--~d~~~~----~~~~~~~--------~~~~~ai~~Al~~A 288 (407)
T TIGR03150 225 DGFVMGEGAGVLVLEELEHAKARGAKIYAEI--VGYGMS--GDAYHI----TAPAPEG--------EGAARAMRAALKDA 288 (407)
T ss_pred CcEEEeceEEEEEEeeHHHHHHCCCeEEEEE--EEEEEC--CCCCCC----CCCCCCc--------HHHHHHHHHHHHHc
Confidence 135679999999998632 1 11110 111100 000000 0010011 23457788999998
Q ss_pred hchhCCCCCccccceecccCCch
Q 018515 229 EKLEGKQFSLSNADYFVFHSPYN 251 (354)
Q Consensus 229 g~~~~~~l~~~Did~~v~HQan~ 251 (354)
+ ++++|||++.+|-.+.
T Consensus 289 g------i~~~dId~ve~h~tgt 305 (407)
T TIGR03150 289 G------INPEDVDYINAHGTST 305 (407)
T ss_pred C------CCHhHCCEEeCcCCCC
Confidence 9 9999999999996555
No 71
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=99.22 E-value=5.4e-11 Score=118.49 Aligned_cols=98 Identities=15% Similarity=0.145 Sum_probs=78.9
Q ss_pred eecCCCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCC-----CcHHHHHHHHhcCCCCCCeeEEeecCcChH
Q 018515 45 AFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKS-----KSIKTFLMQIFEKFGNTDIEGVDSTNACYG 119 (354)
Q Consensus 45 ~~~~~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~-----p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g 119 (354)
++..++++..+|+.+|+++||+++|++++|||.+|++|.++++.. +..... ..+++ ..+++++++.+|++
T Consensus 18 ~~~~~~~s~~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~--~~~~~---~g~~~~~v~~~Cas 92 (403)
T PRK06289 18 NWTKEGRDFADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPAT--VHPAL---WGVPASRHEAACAS 92 (403)
T ss_pred ccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHH--HhhcC---CCCceeecccccHH
Confidence 344457899999999999999999999999999999987665322 222222 22344 24568999999999
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEEeeccc
Q 018515 120 GTAALFNCVNWVESSSWDGRYGLVVCTDSA 149 (354)
Q Consensus 120 ~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~ 149 (354)
++++|.+|..+|++|.+ ++|||+++|..
T Consensus 93 g~~al~~Aa~~I~sG~~--~~VLvvg~e~~ 120 (403)
T PRK06289 93 GSVATLAAMADLRAGRY--DVALVVGVELM 120 (403)
T ss_pred HHHHHHHHHHHHHcCCC--CEEEEEEEEec
Confidence 99999999999999966 99999999874
No 72
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=99.21 E-value=7e-11 Score=117.44 Aligned_cols=97 Identities=11% Similarity=0.065 Sum_probs=79.6
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHH
Q 018515 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN 129 (354)
Q Consensus 50 ~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~ 129 (354)
+.+..+|+.+|+++||+++|++|+|||.||+++..++.. +.+...+..|++.-+.++++++|+.+|++++.|+..|..
T Consensus 28 ~~~~~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~--~~~~~~~~~l~ag~~~~~p~~~V~~aCaSG~~Av~~A~~ 105 (397)
T PRK06954 28 SLTAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQ--GQAPARQAALGAGLPLSVGCTTVNKMCGSGMRAAMFAHD 105 (397)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCcc--chHHHHHHHHcCCCCCCccEeeccccchHHHHHHHHHHH
Confidence 567899999999999999999999999999998765543 223333334444114469999999999999999999999
Q ss_pred HHHcCCCCCCEEEEEeecccc
Q 018515 130 WVESSSWDGRYGLVVCTDSAV 150 (354)
Q Consensus 130 ~i~sg~~~~~~vLVV~~e~~~ 150 (354)
+|++|.+ +.+||+++|..+
T Consensus 106 ~I~sG~~--d~vLv~G~E~ms 124 (397)
T PRK06954 106 MLVAGSV--DVIVAGGMESMT 124 (397)
T ss_pred HHHCCCC--CEEEEEeeeccC
Confidence 9999966 999999999854
No 73
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=99.20 E-value=5.9e-10 Score=109.35 Aligned_cols=92 Identities=13% Similarity=0.165 Sum_probs=76.8
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHH
Q 018515 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN 129 (354)
Q Consensus 50 ~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~ 129 (354)
+..+.+|+..|.+.+++ |++ ++||.+|+++..+.. ...+-.+...+|+ +..++++-|+.+|++++.++..|..
T Consensus 22 ~~~~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~~--~~~~r~~~~~~Gl--~~~~p~~tV~~~CaSG~~Ai~~a~~ 94 (361)
T PRK06690 22 DYEVQQLAAPLLTFLSK--GME-REIDDVILGNVVGPG--GNVARLSALEAGL--GLHIPGVTIDRQCGAGLEAIRTACH 94 (361)
T ss_pred CCCHHHHHHHHHHHHHc--cch-hhcCEEEEEecCCCc--chHHHHHHHHcCC--CCCCCceehhhhhhHHHHHHHHHHH
Confidence 35678999999999865 896 899999999765432 3344457888999 4478999999999999999999999
Q ss_pred HHHcCCCCCCEEEEEeecccc
Q 018515 130 WVESSSWDGRYGLVVCTDSAV 150 (354)
Q Consensus 130 ~i~sg~~~~~~vLVV~~e~~~ 150 (354)
+|++|.+ +.+|+++.|..+
T Consensus 95 ~I~sG~~--d~~l~gG~E~ms 113 (361)
T PRK06690 95 FIQGGAG--KCYIAGGVESTS 113 (361)
T ss_pred HHHCCCC--CEEEEecccccc
Confidence 9999965 999999999753
No 74
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=99.20 E-value=9.3e-11 Score=116.31 Aligned_cols=94 Identities=14% Similarity=0.032 Sum_probs=81.6
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCC--CCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHH
Q 018515 49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDK--SKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFN 126 (354)
Q Consensus 49 ~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~--~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~ 126 (354)
++++..+|+.+|+++||+++|++++|||.+|+++ +++.. .+..+..+++.||+ ...+++++.++|+++..+|..
T Consensus 25 ~~~~~~~L~~~A~~~Al~dagl~~~dID~~i~~~-~~~~~~~~~~~a~~l~~~lG~---~~~~~~~V~~~gasG~~al~~ 100 (392)
T PRK06065 25 LLETPQELAWEAASKALDEAGLELKDIDCVVIGS-APDAFDGVHMKGEYLSHGSGG---IRKPVSRVYVGGATGVMTAIA 100 (392)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEec-cCCcccccccHHHHHHHHcCC---CCCCeEEEecCchhHHHHHHH
Confidence 4678899999999999999999999999999986 33322 35578889999998 346789999999999999999
Q ss_pred HHHHHHcCCCCCCEEEEEeecc
Q 018515 127 CVNWVESSSWDGRYGLVVCTDS 148 (354)
Q Consensus 127 A~~~i~sg~~~~~~vLVV~~e~ 148 (354)
|..+|++|.+ ++||||++|.
T Consensus 101 A~~~I~sG~a--d~vLVvg~e~ 120 (392)
T PRK06065 101 GWYHVASGLC--QKVLAVAEEK 120 (392)
T ss_pred HHHHHhCCCC--CEEEEEEeec
Confidence 9999999966 9999999875
No 75
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.18 E-value=2.4e-09 Score=105.86 Aligned_cols=219 Identities=13% Similarity=0.113 Sum_probs=130.0
Q ss_pred ceeEEeEEEEecCCccccHHHHH-Hhh-CCCc-chhhhcccc---eeEeecCCCCCHHHHHHHHHHHHHHHcCCCc--CC
Q 018515 3 KNVGILAMDIYFPPTCVQQEALE-AHD-GASK-GKYTIGLGQ---ECMAFCSEVEDVISMSLTAVTNLLEKYKIDP--KQ 74 (354)
Q Consensus 3 ~~v~I~~ig~ylP~~~v~~~el~-~~~-g~~~-~~i~~~~Gi---~~r~~~~~~e~~~~La~~Aa~~aL~~agi~~--~d 74 (354)
+.|.|+|+|...|--. .+++- ..+ |.+- ..+...... .-+.+.........++..|+++||+++|+++ ++
T Consensus 2 ~rVvITG~G~vsp~G~--~~~~~~~l~~G~sgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~Al~dagl~~~~~~ 79 (381)
T PRK05952 2 MKVVVTGIGLVSALGD--LEQSWQRLLQGKSGIKLHQPFPELPPLPLGLIGNQPSSLEDLTKTVVTAALKDAGLTPPLTD 79 (381)
T ss_pred CeEEEEeeEEECcccC--HHHHHHHHHcCCCCeEeCCcccccccccceeeccccccccHHHHHHHHHHHHhcCCCCCCCC
Confidence 3799999999999886 44443 332 2210 001000000 0000000001223477789999999999964 44
Q ss_pred ccEEEEeeccCC--------------------C--------CCCc-HHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHH
Q 018515 75 IGRLEVGSETVI--------------------D--------KSKS-IKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALF 125 (354)
Q Consensus 75 Id~lI~aT~t~~--------------------~--------~~p~-~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~ 125 (354)
+. |+++|..+. + .+|+ .+..+...+|++|+ ++-+..+|++++.||.
T Consensus 80 ~G-v~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~~Gp----~~ti~~aCasg~~Ai~ 154 (381)
T PRK05952 80 CG-VVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQGP----VLAPMAACATGLWAIA 154 (381)
T ss_pred EE-EEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCCCCc----cccccchhHHHHHHHH
Confidence 54 455553221 0 1222 56788999999653 5668999999999999
Q ss_pred HHHHHHHcCCCCCCEEEEEeecc-c-c-----c------C--------CCCCCCcccceeEEEEeccCC-------Ccee
Q 018515 126 NCVNWVESSSWDGRYGLVVCTDS-A-V-----Y------A--------EGPARPTGGAAAVVMLVGPDA-------PVAF 177 (354)
Q Consensus 126 ~A~~~i~sg~~~~~~vLVV~~e~-~-~-----~------~--------~~~~~~~~GDGAaA~ll~~~~-------~~~~ 177 (354)
.|.++|++|.+ +.+||.++|. . . + . .+...+++||||++++|++.. .+..
T Consensus 155 ~A~~~i~~G~~--d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~rPfd~~r~G~v~gEGaa~lvLe~~~~A~~rg~~i~a 232 (381)
T PRK05952 155 QGVELIQTGQC--QRVIAGAVEAPITPLTLAGFQQMGALAKTGAYPFDRQREGLVLGEGGAILVLESAELAQKRGAKIYG 232 (381)
T ss_pred HHHHHHHcCCC--CEEEEccccccCCHHHHHHHHhcCCcCCCCCCCCCCCCCCccccccEEEEEEeeHHHHHhCCCceEE
Confidence 99999999965 9999999986 2 1 0 0 011236789999999998632 1111
Q ss_pred eeccccccccccccccccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHhhchhCCCCCccccceecccCCchH
Q 018515 178 ESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNK 252 (354)
Q Consensus 178 ~~~~~g~~~~~~~~~~~p~~~~~~~~~dg~~~~~~~~~~~~~~i~~~l~~~g~~~~~~l~~~Did~~v~HQan~~ 252 (354)
. ..|.... .|-.. ...+..++ +...++++++|++++ ++++|||++-.|-.+.+
T Consensus 233 ~--I~g~~~~--~d~~~----~~~~~~~~--------~~~~~ai~~Al~~ag------i~p~dId~i~~hgtgt~ 285 (381)
T PRK05952 233 Q--ILGFGLT--CDAYH----MSAPEPDG--------KSAIAAIQQCLARSG------LTPEDIDYIHAHGTATR 285 (381)
T ss_pred E--EEEEEec--CCCCC----CCCCCCCH--------HHHHHHHHHHHHHhC------CCHHHeeEEEccCCCCC
Confidence 1 0111100 00000 00011111 244578888999999 99999999999955444
No 76
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=99.17 E-value=7.3e-10 Score=110.66 Aligned_cols=170 Identities=18% Similarity=0.157 Sum_probs=110.4
Q ss_pred HHHHHHHHHHHHHHHcCCC---cCCccEEEEeec---------------cCCCCCC--------c-HHHHHHHHhcCCCC
Q 018515 53 VISMSLTAVTNLLEKYKID---PKQIGRLEVGSE---------------TVIDKSK--------S-IKTFLMQIFEKFGN 105 (354)
Q Consensus 53 ~~~La~~Aa~~aL~~agi~---~~dId~lI~aT~---------------t~~~~~p--------~-~a~~v~~~LGl~g~ 105 (354)
...|+..|+++||+++|++ +++|+.++.++. .+.+..| + .+.+|+..+|++|
T Consensus 80 ~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~G- 158 (410)
T PRK07103 80 SAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIRG- 158 (410)
T ss_pred HHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCCCC-
Confidence 4679999999999999986 466776665432 1111112 1 4567889999943
Q ss_pred CCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeeccc-c-----------------cCC-----------CCC
Q 018515 106 TDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA-V-----------------YAE-----------GPA 156 (354)
Q Consensus 106 ~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~-~-----------------~~~-----------~~~ 156 (354)
+++.++.+|++++.||..|..+|++|.+ +.+||+++|.. . +.. +..
T Consensus 159 ---~~~tv~~acas~~~Al~~A~~~I~~G~~--d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~~~d 233 (410)
T PRK07103 159 ---EGFTVGGASASGQLAVIQAARLVQSGSV--DACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQDRD 233 (410)
T ss_pred ---CcccccchhHHHHHHHHHHHHHHHcCCC--CEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCCCCC
Confidence 4677999999999999999999999966 99999988631 0 000 012
Q ss_pred CCcccceeEEEEeccCC-------CceeeeccccccccccccccccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHhh
Q 018515 157 RPTGGAAAVVMLVGPDA-------PVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYE 229 (354)
Q Consensus 157 ~~~~GDGAaA~ll~~~~-------~~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~dg~~~~~~~~~~~~~~i~~~l~~~g 229 (354)
.++.|+||+++||++.. .+... ..|.... .+... ...| + .....+++++++++++
T Consensus 234 G~v~gEGaaalvLe~~~~A~~~g~~i~a~--I~g~~~~--~d~~~----~~~p--~--------~~~~~~a~~~Al~~Ag 295 (410)
T PRK07103 234 GFIYGEACGAVVLESAESARRRGARPYAK--LLGWSMR--LDANR----GPDP--S--------LEGEMRVIRAALRRAG 295 (410)
T ss_pred CeeEeeeEEEEEEccHHHHHHCCCceEEE--EEEEEEe--cCCCC----CCCC--C--------HHHHHHHHHHHHHHcC
Confidence 35679999999998632 11111 1111100 00000 0001 1 1223467888888888
Q ss_pred chhCCCCCccccceecccCCchH
Q 018515 230 KLEGKQFSLSNADYFVFHSPYNK 252 (354)
Q Consensus 230 ~~~~~~l~~~Did~~v~HQan~~ 252 (354)
++++|||++..|-.+..
T Consensus 296 ------i~~~dId~v~~hgtgt~ 312 (410)
T PRK07103 296 ------LGPEDIDYVNPHGTGSP 312 (410)
T ss_pred ------CCHHHCCEEEccCCCCC
Confidence 99999999999965443
No 77
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.17 E-value=3.1e-09 Score=106.33 Aligned_cols=170 Identities=14% Similarity=0.073 Sum_probs=109.9
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcc----EEEEeeccCCC-------------------------CCC-cHHHHHHHHhcCC
Q 018515 54 ISMSLTAVTNLLEKYKIDPKQIG----RLEVGSETVID-------------------------KSK-SIKTFLMQIFEKF 103 (354)
Q Consensus 54 ~~La~~Aa~~aL~~agi~~~dId----~lI~aT~t~~~-------------------------~~p-~~a~~v~~~LGl~ 103 (354)
..++..|+++||+++|+++.+.+ .|+++|..+.+ ..| ..+.+|...+|++
T Consensus 75 ~~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl~ 154 (414)
T PRK08722 75 IQYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLR 154 (414)
T ss_pred HHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCCC
Confidence 45889999999999999765433 35566543211 112 2677899999996
Q ss_pred CCCCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeeccc-c------------cC-----CC---------CC
Q 018515 104 GNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA-V------------YA-----EG---------PA 156 (354)
Q Consensus 104 g~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~-~------------~~-----~~---------~~ 156 (354)
|+ ++-+..+|++++.||..|..+|++|.+ +.+||.++|.. . .. +. ..
T Consensus 155 Gp----~~ti~~aCas~~~Al~~A~~~i~~G~~--d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~~ 228 (414)
T PRK08722 155 GP----NIAISTACTTGLHNIGHAARMIAYGDA--DAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDRD 228 (414)
T ss_pred CC----ccccccccHHHHHHHHHHHHHHHcCCC--CEEEEecccccCCHHHHHHHHHcCCcccCCCCCccccCcCcCCCC
Confidence 53 466899999999999999999999966 99999999873 1 00 00 01
Q ss_pred CCcccceeEEEEeccCC-------CceeeeccccccccccccccccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHhh
Q 018515 157 RPTGGAAAVVMLVGPDA-------PVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYE 229 (354)
Q Consensus 157 ~~~~GDGAaA~ll~~~~-------~~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~dg~~~~~~~~~~~~~~i~~~l~~~g 229 (354)
.++.||||+++||++.. .+.......+...+ ...+..|. .++ .....++++.+++++
T Consensus 229 G~~~gEGaaalvLe~~~~A~~~g~~i~a~i~g~~~~~d-~~~~~~p~-------~~~--------~~~~~a~~~Al~~ag 292 (414)
T PRK08722 229 GFVLGDGAGMMVLEEYEHAKARGAKIYAELVGFGMSGD-AYHMTSPS-------EDG--------SGGALAMEAAMRDAG 292 (414)
T ss_pred ceEeeceEEEEEEccHHHHHHCCCeEEEEEEEEEEcCC-CCCCCCCC-------cch--------HHHHHHHHHHHHHcC
Confidence 35569999999998632 11111000111000 00011111 111 223466788888888
Q ss_pred chhCCCCCccccceecccCCch
Q 018515 230 KLEGKQFSLSNADYFVFHSPYN 251 (354)
Q Consensus 230 ~~~~~~l~~~Did~~v~HQan~ 251 (354)
++++|||++-.|-.+.
T Consensus 293 ------i~~~did~ie~hgtgt 308 (414)
T PRK08722 293 ------VTGEQIGYVNAHGTST 308 (414)
T ss_pred ------CCHHHcCEEEccCccC
Confidence 9999999999995443
No 78
>PRK06158 thiolase; Provisional
Probab=99.15 E-value=1.7e-10 Score=114.21 Aligned_cols=88 Identities=10% Similarity=-0.065 Sum_probs=76.8
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHH
Q 018515 49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV 128 (354)
Q Consensus 49 ~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~ 128 (354)
++++..+|+.+|+++||+++|++++|||.||+++. .+..|+ ..+++.||+ +..++++++.+|+++..+|..|.
T Consensus 24 ~~~t~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~--~~~~~~--~~la~~lGl---~~~~~~~~~~g~~s~~~al~~A~ 96 (384)
T PRK06158 24 PGLSAMELLAQAAHRALADAGLTMADVDGLFTASP--DDALWG--LSVAEYLGI---RPRFVDGTMIGGSSFLAHLLPAA 96 (384)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecC--CCCCcH--HHHHHHcCC---CCeeeccccCccHHHHHHHHHHH
Confidence 46889999999999999999999999999999863 333444 579999999 45778899999999999999999
Q ss_pred HHHHcCCCCCCEEEEEe
Q 018515 129 NWVESSSWDGRYGLVVC 145 (354)
Q Consensus 129 ~~i~sg~~~~~~vLVV~ 145 (354)
.+|++|.+ ++|||+.
T Consensus 97 ~~I~sG~~--d~vLV~~ 111 (384)
T PRK06158 97 LALEAGLC--DVALICY 111 (384)
T ss_pred HHHHcCCC--CEEEEee
Confidence 99999966 9999983
No 79
>PLN02287 3-ketoacyl-CoA thiolase
Probab=99.15 E-value=2.4e-10 Score=115.19 Aligned_cols=97 Identities=11% Similarity=0.153 Sum_probs=83.8
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCc-HHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHH
Q 018515 49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKS-IKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC 127 (354)
Q Consensus 49 ~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~-~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A 127 (354)
.+.+..+|+.+|+++||+++|++++|||.||+++.++....+. .+..+...+|+ +..+++++++.+|++++.++..|
T Consensus 67 ~~~s~~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl--~~~~pa~~V~~~CaSG~~Ai~~A 144 (452)
T PLN02287 67 KDTYPDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGF--PETVPVRTVNRQCSSGLQAVADV 144 (452)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCC--CCCcceEEEeccCchHHHHHHHH
Confidence 4678999999999999999999999999999988765554444 34466677899 44589999999999999999999
Q ss_pred HHHHHcCCCCCCEEEEEeeccc
Q 018515 128 VNWVESSSWDGRYGLVVCTDSA 149 (354)
Q Consensus 128 ~~~i~sg~~~~~~vLVV~~e~~ 149 (354)
...|++|.+ +.|||++.|..
T Consensus 145 a~~I~sG~~--dvvLv~GvE~m 164 (452)
T PLN02287 145 AAAIKAGFY--DIGIGAGVESM 164 (452)
T ss_pred HHHHHcCCC--CeEEEEeEEec
Confidence 999999965 99999999974
No 80
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=99.15 E-value=9e-10 Score=109.35 Aligned_cols=133 Identities=16% Similarity=0.168 Sum_probs=89.8
Q ss_pred CcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeeccc-cc-----------------
Q 018515 90 KSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA-VY----------------- 151 (354)
Q Consensus 90 p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~-~~----------------- 151 (354)
+..+.+|+..||++| +++.+..+|+++++||..|..+|++|.+ +.|||+++|.. ..
T Consensus 137 ~~~a~~ia~~lgl~G----p~~~i~~acas~~~Al~~A~~~I~~G~~--d~vlvgg~d~~~~~~~~~~~~~~~l~~~~~~ 210 (392)
T PRK09185 137 GSLADFLRAYLGLSG----PAYTISTACSSSAKVFASARRLLEAGLC--DAAIVGGVDSLCRLTLNGFNSLESLSPQPCR 210 (392)
T ss_pred cHHHHHHHHHhCCCC----CcccccChhHHHHHHHHHHHHHHHcCCC--CEEEEeeccccChHHHHHHHhccccCCCccC
Confidence 347889999999943 4788899999999999999999999966 99999999852 10
Q ss_pred --CCCCCCCcccceeEEEEeccCCC--ceeeeccccccccccccccccCCCCCccccCCcchHHHHHHHHHHHHHHHHHH
Q 018515 152 --AEGPARPTGGAAAVVMLVGPDAP--VAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSK 227 (354)
Q Consensus 152 --~~~~~~~~~GDGAaA~ll~~~~~--~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~dg~~~~~~~~~~~~~~i~~~l~~ 227 (354)
..+...+++||||+++|+++... +.+. ..|...+. .....| ..++ .....++++++++
T Consensus 211 Pfd~~~~G~~~gEGaa~vVLe~~~~~~~~I~--g~g~~~d~-~~~~~~-------~~~~--------~~~~~a~~~Al~~ 272 (392)
T PRK09185 211 PFSANRDGINIGEAAAFFLLEREDDAAVALL--GVGESSDA-HHMSAP-------HPEG--------LGAILAMQQALAD 272 (392)
T ss_pred CCcCCCCccceeceEEEEEEEEcCCCcEEEE--EEEEeCCC-CCCCCC-------CCCH--------HHHHHHHHHHHHH
Confidence 01113477899999999987522 2111 01111110 000011 1111 2334678889999
Q ss_pred hhchhCCCCCccccceecccCCchH
Q 018515 228 YEKLEGKQFSLSNADYFVFHSPYNK 252 (354)
Q Consensus 228 ~g~~~~~~l~~~Did~~v~HQan~~ 252 (354)
++ ++++|||++.+|-.+.+
T Consensus 273 Ag------l~~~dId~v~~hgtgt~ 291 (392)
T PRK09185 273 AG------LAPADIGYINLHGTATP 291 (392)
T ss_pred cC------CCHHHccEEEeCCCCCc
Confidence 88 99999999999955443
No 81
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=99.13 E-value=3.7e-10 Score=106.31 Aligned_cols=98 Identities=18% Similarity=0.141 Sum_probs=84.8
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHH
Q 018515 49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV 128 (354)
Q Consensus 49 ~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~ 128 (354)
.+.+..+|+.+|++.+|++++++|++||.||+++..+....+..+..+.-..|+ +.+++++.|+.+|++++.|+..|.
T Consensus 22 ~~~~~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl--~~~vp~~~V~~~CaSG~~Av~~a~ 99 (264)
T PF00108_consen 22 ADVSPEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALAAGL--PESVPATTVNRACASGLQAVHLAA 99 (264)
T ss_dssp TTS-HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHHTTS---TTSEEEEEE-GGGHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhhccc--ccccceeeehhhhhHHHHHHHHhh
Confidence 367889999999999999999999999999999987766566678888888999 678999999999999999999999
Q ss_pred HHHHcCCCCCCEEEEEeecccc
Q 018515 129 NWVESSSWDGRYGLVVCTDSAV 150 (354)
Q Consensus 129 ~~i~sg~~~~~~vLVV~~e~~~ 150 (354)
..|++|.+ +.+|+++.|..+
T Consensus 100 ~~I~sG~~--dvvlagGvE~mS 119 (264)
T PF00108_consen 100 MAIASGEA--DVVLAGGVESMS 119 (264)
T ss_dssp HHHHTTS---SEEEEEEEEETT
T ss_pred hhhcCCCc--cEEEEecccccc
Confidence 99999966 999999999964
No 82
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=99.12 E-value=3.4e-10 Score=112.28 Aligned_cols=96 Identities=18% Similarity=0.156 Sum_probs=78.6
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCC--CCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHH
Q 018515 49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDK--SKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFN 126 (354)
Q Consensus 49 ~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~--~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~ 126 (354)
.+++..+|+.+|+++||+++|++++|||.||+++..+... .+..+..+...+|+ ..+++++|+++|++++.||..
T Consensus 18 ~~~~~~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl---~~~p~~~v~~~CaSg~~Al~~ 94 (389)
T PRK07516 18 DAETLESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPAL---RFKPATRVENACATGSAAVYA 94 (389)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCC---CCCceeeeccccHHHHHHHHH
Confidence 3578899999999999999999999999999987643221 11223334456677 568899999999999999999
Q ss_pred HHHHHHcCCCCCCEEEEEeeccc
Q 018515 127 CVNWVESSSWDGRYGLVVCTDSA 149 (354)
Q Consensus 127 A~~~i~sg~~~~~~vLVV~~e~~ 149 (354)
|..+|++|.+ ++|||+++|..
T Consensus 95 A~~~I~sG~~--d~vLvvg~e~~ 115 (389)
T PRK07516 95 ALDAIEAGRA--RIVLVVGAEKM 115 (389)
T ss_pred HHHHHHCCCC--CEEEEEEehhh
Confidence 9999999966 99999999974
No 83
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=99.11 E-value=4e-10 Score=111.83 Aligned_cols=97 Identities=8% Similarity=0.017 Sum_probs=84.7
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCC-CCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHH
Q 018515 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDK-SKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV 128 (354)
Q Consensus 50 ~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~-~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~ 128 (354)
+.+..+|+.+|+++||+++|+.+++||.+|+++.+++.. .+.++.+++..+|+ +.+++++.|+.+|++++.|+..|.
T Consensus 24 ~~~~~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl--~~~~p~~~V~~aCaSG~~Al~~A~ 101 (391)
T PRK07661 24 TVRPDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGL--PYTVPAITINRYCSSGLQSIAYGA 101 (391)
T ss_pred CCCHHHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCC--CCCcceeehhhhhhHHHHHHHHHH
Confidence 457889999999999999998889999999997665433 36677789999999 435999999999999999999999
Q ss_pred HHHHcCCCCCCEEEEEeecccc
Q 018515 129 NWVESSSWDGRYGLVVCTDSAV 150 (354)
Q Consensus 129 ~~i~sg~~~~~~vLVV~~e~~~ 150 (354)
.+|++|.+ +.+||++.|..+
T Consensus 102 ~~I~sG~~--d~vLv~G~E~ms 121 (391)
T PRK07661 102 ERIMLGHS--EAVIAGGAESMS 121 (391)
T ss_pred HHHHcCCC--CEEEEEEEeecc
Confidence 99999966 999999999753
No 84
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.11 E-value=2.2e-09 Score=107.04 Aligned_cols=172 Identities=15% Similarity=0.128 Sum_probs=113.0
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcc----EEEEeeccCC---------------------C----CCCc-HHHHHHHHhcC
Q 018515 53 VISMSLTAVTNLLEKYKIDPKQIG----RLEVGSETVI---------------------D----KSKS-IKTFLMQIFEK 102 (354)
Q Consensus 53 ~~~La~~Aa~~aL~~agi~~~dId----~lI~aT~t~~---------------------~----~~p~-~a~~v~~~LGl 102 (354)
...|+..|+++||+++|++++++| .++++|..+. . ..++ .+.++...+|+
T Consensus 72 ~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 151 (411)
T PRK07314 72 FIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYGA 151 (411)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhCC
Confidence 457999999999999999999988 5777764321 1 1122 45678999999
Q ss_pred CCCCCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeeccc-c------c---------C--CC---------C
Q 018515 103 FGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA-V------Y---------A--EG---------P 155 (354)
Q Consensus 103 ~g~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~-~------~---------~--~~---------~ 155 (354)
+| +++-+..+|++++.||..|..+|++|.+ +.+||.++|.. . + . +. .
T Consensus 152 ~G----p~~tv~~acaSgl~Al~~A~~~I~~G~~--d~vlvgg~~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~ 225 (411)
T PRK07314 152 KG----PNHSIVTACATGAHAIGDAARLIAYGDA--DVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDR 225 (411)
T ss_pred CC----ccccchhhhHHHHHHHHHHHHHHhcCCC--CEEEEeeecccCCHHHHHHHHHhccccCCCCCCCcCcCCCcCCC
Confidence 44 3455778999999999999999999966 99999998862 1 0 0 00 1
Q ss_pred CCCcccceeEEEEeccCC-------CceeeeccccccccccccccccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHh
Q 018515 156 ARPTGGAAAVVMLVGPDA-------PVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKY 228 (354)
Q Consensus 156 ~~~~~GDGAaA~ll~~~~-------~~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~dg~~~~~~~~~~~~~~i~~~l~~~ 228 (354)
..+..||||+|+||++.. .+... ..|.... .+.... ..+...+ .....+++++++++
T Consensus 226 dG~~~geGAaavvL~~~~~A~~~g~~~~a~--I~g~~~~--~d~~~~----~~~~~~~--------~~~~~a~~~Al~~a 289 (411)
T PRK07314 226 DGFVMGEGAGILVLEELEHAKARGAKIYAE--VVGYGMT--GDAYHM----TAPAPDG--------EGAARAMKLALKDA 289 (411)
T ss_pred CCEeEEceEEEEEEeeHHHHHHCCCeEEEE--EEEEEEc--CCCCCC----CCCCCCc--------HHHHHHHHHHHHHc
Confidence 235679999999998632 11111 0111100 000000 0011111 12346788899999
Q ss_pred hchhCCCCCccccceecccCCchH
Q 018515 229 EKLEGKQFSLSNADYFVFHSPYNK 252 (354)
Q Consensus 229 g~~~~~~l~~~Did~~v~HQan~~ 252 (354)
+ ++++|||++-.|-.+..
T Consensus 290 g------i~~~dId~v~~hgtgt~ 307 (411)
T PRK07314 290 G------INPEDIDYINAHGTSTP 307 (411)
T ss_pred C------CCHHHCCEEEccccCCc
Confidence 9 99999999999965543
No 85
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=99.05 E-value=7.4e-10 Score=110.06 Aligned_cols=94 Identities=10% Similarity=0.108 Sum_probs=78.3
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCC---cHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHH
Q 018515 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSK---SIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFN 126 (354)
Q Consensus 50 ~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p---~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~ 126 (354)
+.+..+|+.+|+++||+++|++|+|||.+|+++.++++..| .....+.. ++ +.++++++|+.+|+++++++.+
T Consensus 29 ~~~~~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a--~~--~~~~p~~~V~~~CaSg~~ai~~ 104 (394)
T PRK06445 29 NIRPEELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLA--RL--PYNIPAMAVDRQCASSLTTVSI 104 (394)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHc--CC--CCCCcchhhhhhhHHHHHHHHH
Confidence 46889999999999999999999999999999987654323 23333333 34 2468899999999999999999
Q ss_pred HHHHHHcCCCCCCEEEEEeeccc
Q 018515 127 CVNWVESSSWDGRYGLVVCTDSA 149 (354)
Q Consensus 127 A~~~i~sg~~~~~~vLVV~~e~~ 149 (354)
|..+|++|.+ ++|||++.|..
T Consensus 105 A~~~I~sG~~--d~vLv~G~e~m 125 (394)
T PRK06445 105 GAMEIATGMA--DIVIAGGVEHM 125 (394)
T ss_pred HHHHHHcCCC--CEEEEeeeccc
Confidence 9999999966 99999999964
No 86
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.04 E-value=7.9e-09 Score=103.11 Aligned_cols=114 Identities=18% Similarity=0.181 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCccE----EEEeeccCC-------------------------CCCC-cHHHHHHHHhcC
Q 018515 53 VISMSLTAVTNLLEKYKIDPKQIGR----LEVGSETVI-------------------------DKSK-SIKTFLMQIFEK 102 (354)
Q Consensus 53 ~~~La~~Aa~~aL~~agi~~~dId~----lI~aT~t~~-------------------------~~~p-~~a~~v~~~LGl 102 (354)
...|+..|+++||+++|+++++++. +++++..+. ...| ..+..|...+|+
T Consensus 72 ~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 151 (406)
T PRK08439 72 FIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGL 151 (406)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhCC
Confidence 4679999999999999999877763 455443211 0112 367789999999
Q ss_pred CCCCCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeeccc--c-----c---------C--C---------CC
Q 018515 103 FGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA--V-----Y---------A--E---------GP 155 (354)
Q Consensus 103 ~g~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~--~-----~---------~--~---------~~ 155 (354)
+| +++.+..+|+++++||..|..+|++|.+ +.+||+++|.. . + . + +.
T Consensus 152 ~G----p~~~~~~acas~~~Al~~A~~~i~~G~~--d~~lv~g~d~~l~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~ 225 (406)
T PRK08439 152 KG----PNLSSVTACAAGTHAIIEAVKTIMLGGA--DKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDKDR 225 (406)
T ss_pred CC----CccccccHhHHHHHHHHHHHHHHHcCCC--CEEEEecchhccCHHHHHHHHHhCccccCCCCCccCcCCccCCC
Confidence 54 3577889999999999999999999966 99999999852 0 0 0 0 01
Q ss_pred CCCcccceeEEEEeccC
Q 018515 156 ARPTGGAAAVVMLVGPD 172 (354)
Q Consensus 156 ~~~~~GDGAaA~ll~~~ 172 (354)
..++.|+||+++||++.
T Consensus 226 ~G~v~gEGa~~lvLe~~ 242 (406)
T PRK08439 226 DGFVMGEGAGALVLEEY 242 (406)
T ss_pred CcEEeeCceEEEEEccH
Confidence 23567999999999863
No 87
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.04 E-value=6.9e-09 Score=103.93 Aligned_cols=171 Identities=15% Similarity=0.091 Sum_probs=110.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCc-c----EEEEeeccCCC---------------------CC----C-cHHHHHHHHhc
Q 018515 53 VISMSLTAVTNLLEKYKIDPKQI-G----RLEVGSETVID---------------------KS----K-SIKTFLMQIFE 101 (354)
Q Consensus 53 ~~~La~~Aa~~aL~~agi~~~dI-d----~lI~aT~t~~~---------------------~~----p-~~a~~v~~~LG 101 (354)
...|+..|+++||+++|++++++ + .++++|..+.. .. + ..+.+|...+|
T Consensus 82 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 161 (424)
T PRK06333 82 FILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYG 161 (424)
T ss_pred HHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHHHhC
Confidence 35689999999999999988776 3 45666643211 11 1 14667889999
Q ss_pred CCCCCCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeeccc-c------------c----CC--C--------
Q 018515 102 KFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA-V------------Y----AE--G-------- 154 (354)
Q Consensus 102 l~g~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~-~------------~----~~--~-------- 154 (354)
++|+ ++-+..+|++++.||..|..+|++|.+ +.+||.++|.. . + .. .
T Consensus 162 l~Gp----~~~v~~aCaSg~~Al~~A~~~I~~G~~--d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~~~~~Pfd~ 235 (424)
T PRK06333 162 FKGP----LGAPVTACAAGVQAIGDAARLIRSGEA--DVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRPFDR 235 (424)
T ss_pred CCCC----CccccchhHHHHHHHHHHHHHHHcCCC--CEEEEeeecccCCHHHHHHHHHcccccccCCCCCCcCCCCCCC
Confidence 9542 455789999999999999999999966 99999999962 0 1 10 0
Q ss_pred -CCCCcccceeEEEEeccCC-------CceeeeccccccccccccccccCCCCCccccCCcchHHHHHHHHHHHHHHHHH
Q 018515 155 -PARPTGGAAAVVMLVGPDA-------PVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCS 226 (354)
Q Consensus 155 -~~~~~~GDGAaA~ll~~~~-------~~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~dg~~~~~~~~~~~~~~i~~~l~ 226 (354)
...++.|+||+++||++.. .+.... .|.... .|.... ..+..++ ....+++++.++
T Consensus 236 ~~~G~~~gEGaa~lvLe~~~~A~~rg~~i~a~i--~G~~~~--~d~~~~----~~~~~~~--------~~~~~a~~~Al~ 299 (424)
T PRK06333 236 DRDGFVMGEGAGILVIETLEHALARGAPPLAEL--VGYGTS--ADAYHM----TAGPEDG--------EGARRAMLIALR 299 (424)
T ss_pred CCCCeEEecceEEEEEeeHHHHHHCCCeEEEEE--EEEEEc--CCCCCC----CCCCCCc--------HHHHHHHHHHHH
Confidence 0235569999999998631 111111 111100 000000 0011111 234577888899
Q ss_pred HhhchhCCCCCccccceecccCCch
Q 018515 227 KYEKLEGKQFSLSNADYFVFHSPYN 251 (354)
Q Consensus 227 ~~g~~~~~~l~~~Did~~v~HQan~ 251 (354)
+++ ++++||||+-.|-.+.
T Consensus 300 ~Ag------i~p~dId~i~~hgtgt 318 (424)
T PRK06333 300 QAG------IPPEEVQHLNAHATST 318 (424)
T ss_pred HcC------CCHHHCCEEeccCCCC
Confidence 988 9999999999995443
No 88
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=99.04 E-value=7.9e-09 Score=104.09 Aligned_cols=172 Identities=16% Similarity=0.122 Sum_probs=111.3
Q ss_pred HHHHHHHHHHHHHHHcCCCc-----CCccEEEEeeccCCC-------------------------CCC-cHHHHHHHHhc
Q 018515 53 VISMSLTAVTNLLEKYKIDP-----KQIGRLEVGSETVID-------------------------KSK-SIKTFLMQIFE 101 (354)
Q Consensus 53 ~~~La~~Aa~~aL~~agi~~-----~dId~lI~aT~t~~~-------------------------~~p-~~a~~v~~~LG 101 (354)
...|+..|+.+||+++|+++ .+...++++|..+.. ..+ ..+.+|...+|
T Consensus 93 ~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~g 172 (437)
T PLN02836 93 FIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRYG 172 (437)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHhC
Confidence 45789999999999999854 245667777642221 012 14668889999
Q ss_pred CCCCCCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeecccc-----------------cCC-----------
Q 018515 102 KFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV-----------------YAE----------- 153 (354)
Q Consensus 102 l~g~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~~-----------------~~~----------- 153 (354)
++| +++-+..+|++++.||..|..+|++|.+ +.+||.++|... +..
T Consensus 173 l~G----p~~tv~~acaSg~~Al~~A~~~I~~G~~--d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~pfd~ 246 (437)
T PLN02836 173 FQG----PNHAAVTACATGAHSIGDAFRMIQFGDA--DVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPTEASRPFDC 246 (437)
T ss_pred CCC----ceeceeChhHHHHHHHHHHHHHHHcCCC--CEEEEccccccCCHHHHHHHHHhhhhhcccCCCcccccCCccc
Confidence 954 3566899999999999999999999966 999998888520 000
Q ss_pred CCCCCcccceeEEEEeccCC-------CceeeeccccccccccccccccCCCCCccccCCcchHHHHHHHHHHHHHHHHH
Q 018515 154 GPARPTGGAAAVVMLVGPDA-------PVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCS 226 (354)
Q Consensus 154 ~~~~~~~GDGAaA~ll~~~~-------~~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~dg~~~~~~~~~~~~~~i~~~l~ 226 (354)
....++.||||+++||++.. .+.... .|.... .+... ...|..++ +....+++++++
T Consensus 247 ~~~G~~~gEGaaalVLe~~~~A~~~g~~i~a~I--~g~~~~--~d~~~----~~~p~~~~--------~~~~~a~~~Al~ 310 (437)
T PLN02836 247 DRDGFVIGEGAGVLVLEELEHAKRRGAKIYAEV--RGYGMS--GDAHH----ITQPHEDG--------RGAVLAMTRALQ 310 (437)
T ss_pred CCCCeeeecCEEEEEEeeHHHHHHCCCceEEEE--Eeeeec--CCCCC----CcCCCcch--------HHHHHHHHHHHH
Confidence 01235679999999998632 111110 111100 00000 00011111 233467788899
Q ss_pred HhhchhCCCCCccccceecccCCchH
Q 018515 227 KYEKLEGKQFSLSNADYFVFHSPYNK 252 (354)
Q Consensus 227 ~~g~~~~~~l~~~Did~~v~HQan~~ 252 (354)
+++ ++++|||++-.|-.+..
T Consensus 311 ~Ag------i~~~dId~ve~hgtgt~ 330 (437)
T PLN02836 311 QSG------LHPNQVDYVNAHATSTP 330 (437)
T ss_pred HcC------CCHhHcCEEEccCCcCc
Confidence 989 99999999999955443
No 89
>PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A ....
Probab=99.02 E-value=4.3e-10 Score=96.99 Aligned_cols=78 Identities=15% Similarity=0.148 Sum_probs=64.7
Q ss_pred HHHHHHHHHHHHHHHHhhchhCCCCCccccceecccCCchHHHHHHHHHhhhhhhhhccccchhHhhhccCCCCCCCCCc
Q 018515 212 CYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDE 291 (354)
Q Consensus 212 ~~~~~~~~~i~~~l~~~g~~~~~~l~~~Did~~v~HQan~~ii~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (354)
...+.++..++.+|++.+ ++..|+++|++|..+.+|++.+.+.|++ ++
T Consensus 37 ~i~~~i~~~~~~~L~~~g------~~~~~~~~wavHPGG~~ILd~v~~~L~L------------------------~~-- 84 (151)
T PF02797_consen 37 LISDNIPPFVEDLLARHG------LSDWDILFWAVHPGGRKILDAVEEALGL------------------------SP-- 84 (151)
T ss_dssp HHHHHHHHHHHHHHHGGT------CCSGGGSEEEEE-SSHHHHHHHHHHHTS-------------------------G--
T ss_pred HHHHHHHHHHHHHHhhhc------ccccccceeeecCChHHHHHHHHHHcCC------------------------CH--
Confidence 344567788889999888 7766778999999999999999999985 43
Q ss_pred cccchhHHHHHHhhhhhHHHhhcccccccccccCccchHHHHHHHHHHhc
Q 018515 292 SYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASLIH 341 (354)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~GN~~saSip~~L~~~l~ 341 (354)
+++..|..++++||||||+||+++|.++++
T Consensus 85 --------------------~~l~~Sr~vLr~yGNmSSaTVlfVL~~~~~ 114 (151)
T PF02797_consen 85 --------------------EQLRASREVLREYGNMSSATVLFVLERMRR 114 (151)
T ss_dssp --------------------GGGHHHHHHHHHH-B-GGGHHHHHHHHHHH
T ss_pred --------------------HHHHHHHHHHHhcCCCCCcchHHHHHHHHh
Confidence 888899999999999999999999999988
No 90
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.00 E-value=9.6e-09 Score=102.47 Aligned_cols=167 Identities=13% Similarity=0.069 Sum_probs=108.1
Q ss_pred HHHHHHHHHHHHHHHcCCCc------CCccEEEEeeccCCC-------------------------CCCc-HHHHHHHHh
Q 018515 53 VISMSLTAVTNLLEKYKIDP------KQIGRLEVGSETVID-------------------------KSKS-IKTFLMQIF 100 (354)
Q Consensus 53 ~~~La~~Aa~~aL~~agi~~------~dId~lI~aT~t~~~-------------------------~~p~-~a~~v~~~L 100 (354)
...|+..|+++||+++|++. +++ .++++|..+.. .+|. .+..|+..+
T Consensus 73 ~~~~al~aa~~Al~dAGl~~~~~~~~~r~-Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~ 151 (405)
T PRK09116 73 VSLMATRASELALEDAGLLGDPILTDGRM-GIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFF 151 (405)
T ss_pred HHHHHHHHHHHHHHHcCCCCccccCCCcE-EEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHh
Confidence 35689999999999999842 233 45555532210 1232 577899999
Q ss_pred cCCCCCCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeecccc------c---------C--CC---------
Q 018515 101 EKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV------Y---------A--EG--------- 154 (354)
Q Consensus 101 Gl~g~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~~------~---------~--~~--------- 154 (354)
|++|+ .+-+..+|++++.||..|..+|++|.+ +.+||.++|... + . +.
T Consensus 152 ~~~Gp----~~ti~~acas~~~Al~~A~~~I~~G~~--d~~lvgg~d~~~~~~~~~f~~l~~~~~~~~~~~~~~rPfd~~ 225 (405)
T PRK09116 152 GLKGR----VIPTSSACTSGSQGIGYAYEAIKYGYQ--TVMLAGGAEELCPTEAAVFDTLFATSTRNDAPELTPRPFDAN 225 (405)
T ss_pred CCCCC----cccccchhhhHHHHHHHHHHHHHcCCC--CEEEEecchhcChHHHHHHHHhhhhccCCCCCCCCCCCCcCC
Confidence 99653 455889999999999999999999966 999999988621 0 0 00
Q ss_pred CCCCcccceeEEEEeccCC-------CceeeeccccccccccccccccCCCCCccccCCcchHHHHHHHHHHHHHHHHHH
Q 018515 155 PARPTGGAAAVVMLVGPDA-------PVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSK 227 (354)
Q Consensus 155 ~~~~~~GDGAaA~ll~~~~-------~~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~dg~~~~~~~~~~~~~~i~~~l~~ 227 (354)
...++.|+||++++|++.. .+.......+...+. .....| + .+...++++++|++
T Consensus 226 ~~G~v~gEGa~~~vLe~~~~A~~rga~i~a~i~g~~~~~d~-~~~~~p---------~--------~~~~~~ai~~AL~~ 287 (405)
T PRK09116 226 RDGLVIGEGAGTLVLEELEHAKARGATIYAEIVGFGTNSDG-AHVTQP---------Q--------AETMQIAMELALKD 287 (405)
T ss_pred CCCEeeeccEEEEEEccHHHHHhCCCceEEEEEEEEEcCCC-CcCCCC---------C--------HHHHHHHHHHHHHH
Confidence 1235569999999998531 111110000100000 000011 1 13445788899999
Q ss_pred hhchhCCCCCccccceecccCCc
Q 018515 228 YEKLEGKQFSLSNADYFVFHSPY 250 (354)
Q Consensus 228 ~g~~~~~~l~~~Did~~v~HQan 250 (354)
++ ++++|||++.+|-.+
T Consensus 288 Ag------i~p~dId~I~~Hgtg 304 (405)
T PRK09116 288 AG------LAPEDIGYVNAHGTA 304 (405)
T ss_pred hC------CCHHHcCEEECcCcc
Confidence 88 999999999999533
No 91
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=99.00 E-value=2.1e-09 Score=107.16 Aligned_cols=95 Identities=11% Similarity=0.115 Sum_probs=81.7
Q ss_pred CCCHHHHHHHHHHHHHHHc-CCCcCCccEEEEeeccCC-CCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHH
Q 018515 50 VEDVISMSLTAVTNLLEKY-KIDPKQIGRLEVGSETVI-DKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC 127 (354)
Q Consensus 50 ~e~~~~La~~Aa~~aL~~a-gi~~~dId~lI~aT~t~~-~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A 127 (354)
+.+..+|+.+|+++||+++ |++++|||.+|+++..+. ...+..+..++..+|+ +.++++.++.+|+++..++..|
T Consensus 24 ~~~~~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl---~~~p~~~v~~~caSG~~av~~A 100 (406)
T PRK07851 24 DMRPDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGY---DFLPGTTVNRYCSSSLQTTRMA 100 (406)
T ss_pred CCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCC---CCCCeeeeeccchhHHHHHHHH
Confidence 4678999999999999997 999999999998864332 2235567789999999 4588899999999999999999
Q ss_pred HHHHHcCCCCCCEEEEEeeccc
Q 018515 128 VNWVESSSWDGRYGLVVCTDSA 149 (354)
Q Consensus 128 ~~~i~sg~~~~~~vLVV~~e~~ 149 (354)
..+|++|.+ +.|||++.|..
T Consensus 101 a~~I~sG~~--d~vLv~G~e~~ 120 (406)
T PRK07851 101 FHAIKAGEG--DVFISAGVETV 120 (406)
T ss_pred HHHHHCCCC--CEEEEeeEEec
Confidence 999999966 99999999974
No 92
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=98.96 E-value=1.3e-08 Score=101.94 Aligned_cols=170 Identities=16% Similarity=0.216 Sum_probs=109.6
Q ss_pred CHHHHHHHHHHHHHHHcCCC-cCCccE----EEEeeccCCCC-------------------------CC-cHHHHHHHHh
Q 018515 52 DVISMSLTAVTNLLEKYKID-PKQIGR----LEVGSETVIDK-------------------------SK-SIKTFLMQIF 100 (354)
Q Consensus 52 ~~~~La~~Aa~~aL~~agi~-~~dId~----lI~aT~t~~~~-------------------------~p-~~a~~v~~~L 100 (354)
....|+..|+++||+++|++ +++++. +++++..+... .+ ..+.+|...+
T Consensus 76 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~ 155 (421)
T PTZ00050 76 RATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKH 155 (421)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHHh
Confidence 35789999999999999998 666553 44444322110 11 1456788888
Q ss_pred cCCCCCCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeeccc-c----------------cC--CC-------
Q 018515 101 EKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA-V----------------YA--EG------- 154 (354)
Q Consensus 101 Gl~g~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~-~----------------~~--~~------- 154 (354)
|++|+ ++-+..+|++++.||..|..+|++|.+ +.+||.++|.. . +. +.
T Consensus 156 ~l~Gp----~~ti~~aCaSg~~Al~~A~~~I~~G~~--d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd 229 (421)
T PTZ00050 156 KLKGP----SGSAVTACATGAHCIGEAFRWIKYGEA--DIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFD 229 (421)
T ss_pred CCCCc----ccccccHhHHHHHHHHHHHHHHHcCCC--CEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCc
Confidence 99553 466889999999999999999999966 99999999862 0 00 00
Q ss_pred --CCCCcccceeEEEEeccCC-------Cceeeeccccccccc-cccccccCCCCCccccCCcchHHHHHHHHHHHHHHH
Q 018515 155 --PARPTGGAAAVVMLVGPDA-------PVAFESKLRGSHMSH-AYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCL 224 (354)
Q Consensus 155 --~~~~~~GDGAaA~ll~~~~-------~~~~~~~~~g~~~~~-~~~~~~p~~~~~~~~~dg~~~~~~~~~~~~~~i~~~ 224 (354)
...+..||||+++||++.. .+... ..|..... ......| ..++ .....+++++
T Consensus 230 ~~~~G~~~gEGAaalvLe~~~~A~~~g~~i~a~--i~g~~~~~d~~~~~~p-------~~~~--------~~~~~ai~~A 292 (421)
T PTZ00050 230 KDRAGFVMGEGAGILVLEELEHALRRGAKIYAE--IRGYGSSSDAHHITAP-------HPDG--------RGARRCMENA 292 (421)
T ss_pred CCCCCEeeccceEEEEEeeHHHHHHCCCeEEEE--EEEEEEcCCCCCCCCC-------CCCh--------HHHHHHHHHH
Confidence 0135569999999998632 11101 01111000 0000111 1111 2345678888
Q ss_pred HHH-hhchhCCCCCccccceecccCCc
Q 018515 225 CSK-YEKLEGKQFSLSNADYFVFHSPY 250 (354)
Q Consensus 225 l~~-~g~~~~~~l~~~Did~~v~HQan 250 (354)
|++ ++ ++++|||++-.|-..
T Consensus 293 l~~~Ag------i~~~dId~ie~hgtg 313 (421)
T PTZ00050 293 LKDGAN------ININDVDYVNAHATS 313 (421)
T ss_pred HHhccC------CChhhCCEEECCCcc
Confidence 888 88 999999999999443
No 93
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=98.95 E-value=1.8e-08 Score=100.38 Aligned_cols=166 Identities=16% Similarity=0.083 Sum_probs=109.2
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcc----EEEEeeccCCC-----------------CC--------C-cHHHHHHHHhcC
Q 018515 53 VISMSLTAVTNLLEKYKIDPKQIG----RLEVGSETVID-----------------KS--------K-SIKTFLMQIFEK 102 (354)
Q Consensus 53 ~~~La~~Aa~~aL~~agi~~~dId----~lI~aT~t~~~-----------------~~--------p-~~a~~v~~~LGl 102 (354)
...|+..|+++||+++|+++++++ .|+++|..+.+ .. + ..+.+|...+|+
T Consensus 71 ~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (399)
T cd00832 71 MTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGM 150 (399)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhCC
Confidence 356899999999999999876543 35666543221 00 1 145688899999
Q ss_pred CCCCCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeeccc-c------c--------CCC-----------CC
Q 018515 103 FGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA-V------Y--------AEG-----------PA 156 (354)
Q Consensus 103 ~g~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~-~------~--------~~~-----------~~ 156 (354)
+|+ ++-+..+|++++.||..|.++|++| . +.+||.++|.. . + ... ..
T Consensus 151 ~Gp----~~ti~~acaS~~~Al~~A~~~i~~G--~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~~~~p~~~~rPFd~~~~ 223 (399)
T cd00832 151 RGP----SGVVVAEQAGGLDALAQARRLVRRG--T-PLVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDAAAA 223 (399)
T ss_pred CCC----cccccchhHHHHHHHHHHHHHHHcC--C-CeEEEEeeccccCHHHHHHHHhccccCCCCCCCCCcCCCcCCCC
Confidence 553 4557899999999999999999999 6 88888888862 1 0 000 12
Q ss_pred CCcccceeEEEEeccCC-------CceeeeccccccccccccccccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHhh
Q 018515 157 RPTGGAAAVVMLVGPDA-------PVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYE 229 (354)
Q Consensus 157 ~~~~GDGAaA~ll~~~~-------~~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~dg~~~~~~~~~~~~~~i~~~l~~~g 229 (354)
.++.|+||++++|++.. .+.-.. .|.... ..+. ..+ . .-+...+++++.|+.++
T Consensus 224 G~~~gEGa~~lvLe~~~~A~~rg~~i~a~i--~g~~~~-----~d~~---~~~---~------~~~~~~~a~~~al~~ag 284 (399)
T cd00832 224 GYVPGEGGAILVLEDAAAARERGARVYGEI--AGYAAT-----FDPP---PGS---G------RPPGLARAIRLALADAG 284 (399)
T ss_pred CEeeeceEEEEEEeeHHHHHHCCCeEEEEE--EeEEEc-----CCCC---CCC---C------CHHHHHHHHHHHHHHcC
Confidence 35669999999998632 111111 111110 0110 000 0 02345678888999988
Q ss_pred chhCCCCCccccceecccCCc
Q 018515 230 KLEGKQFSLSNADYFVFHSPY 250 (354)
Q Consensus 230 ~~~~~~l~~~Did~~v~HQan 250 (354)
++++||||+..|-.+
T Consensus 285 ------~~~~~i~~v~~hgtg 299 (399)
T cd00832 285 ------LTPEDVDVVFADAAG 299 (399)
T ss_pred ------CCHHHccEEEeccCc
Confidence 999999999999544
No 94
>PRK08256 lipid-transfer protein; Provisional
Probab=98.92 E-value=4.4e-09 Score=104.39 Aligned_cols=92 Identities=23% Similarity=0.133 Sum_probs=77.8
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHH
Q 018515 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN 129 (354)
Q Consensus 50 ~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~ 129 (354)
+.+..+|+.+|+++||+++|++++|||.+++++..++... ...+...+|+ ..+++++++.+|++++.++..|..
T Consensus 19 ~~~~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~---~~~~~~~lGl---~~~~~~~v~~~caSg~~ai~~A~~ 92 (391)
T PRK08256 19 SWDYPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDSTS---GQRALYEVGM---TGIPIVNVNNNCSTGSTALFLARQ 92 (391)
T ss_pred CCCHHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcch---hHHHHHHcCC---CCCCCcccccccHHHHHHHHHHHH
Confidence 4678899999999999999999999999998876544321 2346678999 456778999999999999999999
Q ss_pred HHHcCCCCCCEEEEEeeccc
Q 018515 130 WVESSSWDGRYGLVVCTDSA 149 (354)
Q Consensus 130 ~i~sg~~~~~~vLVV~~e~~ 149 (354)
+|++|.+ ++|||+++|..
T Consensus 93 ~I~sG~~--d~vLv~g~e~~ 110 (391)
T PRK08256 93 AVRSGAA--DCALALGFEQM 110 (391)
T ss_pred HHHCCCC--CEEEEEEEeec
Confidence 9999966 99999998863
No 95
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=98.92 E-value=7.4e-09 Score=103.05 Aligned_cols=95 Identities=20% Similarity=0.171 Sum_probs=80.0
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHH
Q 018515 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN 129 (354)
Q Consensus 50 ~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~ 129 (354)
+.+..+|+.+|+++||+++|++++|||.+++++....+........+.+.+|+ + ..+++.++.+|++++.++..|..
T Consensus 24 ~~~~~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl--~-~~~~~~v~~~c~sg~~ai~~A~~ 100 (398)
T PRK06157 24 DAGAEDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRL--P-NIPVTRVENFCATGSEAFRGAVY 100 (398)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCC--C-CCCEEEEecccHHHHHHHHHHHH
Confidence 46789999999999999999999999999998754322112234678889999 3 47788899999999999999999
Q ss_pred HHHcCCCCCCEEEEEeeccc
Q 018515 130 WVESSSWDGRYGLVVCTDSA 149 (354)
Q Consensus 130 ~i~sg~~~~~~vLVV~~e~~ 149 (354)
.|++|.+ +.|||+++|..
T Consensus 101 ~I~sG~~--d~vlv~G~e~~ 118 (398)
T PRK06157 101 AVASGAY--DIALALGVEKL 118 (398)
T ss_pred HHHCCCC--CEEEEEEEeec
Confidence 9999965 99999999974
No 96
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=98.91 E-value=5.8e-09 Score=104.73 Aligned_cols=98 Identities=18% Similarity=0.231 Sum_probs=83.6
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHH
Q 018515 49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV 128 (354)
Q Consensus 49 ~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~ 128 (354)
.+.+..+|+.+|++.+|+++|++|++||.+|+++..+....+.++-.+...+|+ +.+++++-|+.+|++++.|+..|.
T Consensus 25 ~~~~~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl--~~~~P~~tV~~aCaSG~~Ai~~Aa 102 (428)
T PRK08963 25 HGIPAVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGM--NVHTDAYSVSRACATSFQAVANVA 102 (428)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCC--CCCCcceeehhhhHHHHHHHHHHH
Confidence 356789999999999999999999999999999754322224456678888999 446899999999999999999999
Q ss_pred HHHHcCCCCCCEEEEEeecccc
Q 018515 129 NWVESSSWDGRYGLVVCTDSAV 150 (354)
Q Consensus 129 ~~i~sg~~~~~~vLVV~~e~~~ 150 (354)
..|++|.+ +.||+++.|..+
T Consensus 103 ~~I~sG~~--dvvLvgG~Esms 122 (428)
T PRK08963 103 ESIMAGTI--DIGIAGGADSSS 122 (428)
T ss_pred HHHHCCCC--CEEEEecccccC
Confidence 99999966 999999999753
No 97
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=98.91 E-value=1.5e-07 Score=94.01 Aligned_cols=113 Identities=13% Similarity=0.106 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcc----EEEEeeccCCC--------------------------CCCc-HHHHHHHHhc
Q 018515 53 VISMSLTAVTNLLEKYKIDPKQIG----RLEVGSETVID--------------------------KSKS-IKTFLMQIFE 101 (354)
Q Consensus 53 ~~~La~~Aa~~aL~~agi~~~dId----~lI~aT~t~~~--------------------------~~p~-~a~~v~~~LG 101 (354)
...|+..|+++||+++|+++++.+ .++++|..+.. .+|+ .+.+|...+|
T Consensus 71 ~~~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~ 150 (406)
T PRK07967 71 ASAYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFK 150 (406)
T ss_pred HHHHHHHHHHHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHC
Confidence 456899999999999998754332 24444422110 1122 5778999999
Q ss_pred CCCCCCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeecccc------c----------CCC-----------
Q 018515 102 KFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV------Y----------AEG----------- 154 (354)
Q Consensus 102 l~g~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~~------~----------~~~----------- 154 (354)
++|+ ++-+..+|++++.||..|..+|++|.+ +.+||.++|... + ...
T Consensus 151 l~Gp----~~tvs~aCas~~~Ai~~A~~~ir~G~~--d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~ 224 (406)
T PRK07967 151 IKGV----NYSISSACATSAHCIGNAVEQIQLGKQ--DIVFAGGGEELDWEMSCLFDAMGALSTKYNDTPEKASRAYDAN 224 (406)
T ss_pred CCCC----ccccccHhHHHHHHHHHHHHHHHcCCC--CEEEEeeecccChHHHHHHHHhhhhccCCCCCCCcCCcCCcCC
Confidence 9653 455899999999999999999999966 999999988621 0 000
Q ss_pred CCCCcccceeEEEEecc
Q 018515 155 PARPTGGAAAVVMLVGP 171 (354)
Q Consensus 155 ~~~~~~GDGAaA~ll~~ 171 (354)
...++.|+||++++|++
T Consensus 225 r~G~v~gEGaa~lvLe~ 241 (406)
T PRK07967 225 RDGFVIAGGGGVVVVEE 241 (406)
T ss_pred CCceeeeceEEEEEEee
Confidence 01355699999999986
No 98
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=98.90 E-value=9.6e-09 Score=102.28 Aligned_cols=97 Identities=15% Similarity=0.173 Sum_probs=83.8
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCC-CCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHH
Q 018515 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDK-SKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV 128 (354)
Q Consensus 50 ~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~-~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~ 128 (354)
+.++.+|+.+|.++||+++|+++++||.+++++..+... .+.++..+...+|+ +..++++-|+.+|++++.|+..|.
T Consensus 23 ~~~~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl--p~~~p~~tV~~~CaSG~~Ai~~A~ 100 (401)
T PRK08131 23 SVRPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGL--PVTVPGQTVNRLCASGLAAVIDAA 100 (401)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCC--CCCCceeeeechhhhHHHHHHHHH
Confidence 567899999999999999999999999999997643322 24566678888999 557999999999999999999999
Q ss_pred HHHHcCCCCCCEEEEEeecccc
Q 018515 129 NWVESSSWDGRYGLVVCTDSAV 150 (354)
Q Consensus 129 ~~i~sg~~~~~~vLVV~~e~~~ 150 (354)
..|++|.+ +.+|+++.|..+
T Consensus 101 ~~I~sG~~--dvvlagG~Esms 120 (401)
T PRK08131 101 RAITCGEG--DLYLAGGVESMS 120 (401)
T ss_pred HHHHCCCC--CEEEEEEecCCC
Confidence 99999966 999999999753
No 99
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=98.89 E-value=3.6e-08 Score=101.44 Aligned_cols=168 Identities=18% Similarity=0.171 Sum_probs=109.3
Q ss_pred HHHHHHHHHHHHHHcCCCcCCc---c----EEEEeeccCCC------------------------CCCc-HHHHHHHHhc
Q 018515 54 ISMSLTAVTNLLEKYKIDPKQI---G----RLEVGSETVID------------------------KSKS-IKTFLMQIFE 101 (354)
Q Consensus 54 ~~La~~Aa~~aL~~agi~~~dI---d----~lI~aT~t~~~------------------------~~p~-~a~~v~~~LG 101 (354)
..++..|+++||+++|++++.+ + .|+++|..+.. ..+. .+.+|...+|
T Consensus 200 ~~~al~Aa~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~~g 279 (540)
T PLN02787 200 MLYLLTAGKKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDLG 279 (540)
T ss_pred HHHHHHHHHHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHHhC
Confidence 4588999999999999976422 1 46666643221 0111 3567888999
Q ss_pred CCCCCCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeeccc--c-----------c---CCC-----------
Q 018515 102 KFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA--V-----------Y---AEG----------- 154 (354)
Q Consensus 102 l~g~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~--~-----------~---~~~----------- 154 (354)
++|+ .+-+..+|+++++||..|..+|++|.+ +.+||.++|.. . . .++
T Consensus 280 l~Gp----~~tistACASs~~Ai~~A~~~Ir~G~a--D~aLvGG~d~~l~p~~~~~f~~~~aLS~~~~~p~~~~rPFD~~ 353 (540)
T PLN02787 280 WMGP----NYSISTACATSNFCILNAANHIIRGEA--DVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRPWDMN 353 (540)
T ss_pred CCCC----ccccccccccHHHHHHHHHHHHHcCCC--CEEEEeccccccCHHHHHHHHHHHHhhccCCCcccccCCcccC
Confidence 9552 466889999999999999999999965 99999999952 1 0 000
Q ss_pred CCCCcccceeEEEEeccCC-------Cceeeecccccccc-ccccccccCCCCCccccCCcchHHHHHHHHHHHHHHHHH
Q 018515 155 PARPTGGAAAVVMLVGPDA-------PVAFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCS 226 (354)
Q Consensus 155 ~~~~~~GDGAaA~ll~~~~-------~~~~~~~~~g~~~~-~~~~~~~p~~~~~~~~~dg~~~~~~~~~~~~~~i~~~l~ 226 (354)
...++.|+||+++||++.. .+.-.. .|.... ..+....| ..+| .....+++..|+
T Consensus 354 rdGfv~GEGAa~lVLE~~e~A~~rGa~IyA~I--~G~g~s~Da~~~t~p-------~p~g--------~g~~~am~~AL~ 416 (540)
T PLN02787 354 RDGFVMGEGAGVLLLEELEHAKKRGANIYAEF--LGGSFTCDAYHMTEP-------HPEG--------AGVILCIEKALA 416 (540)
T ss_pred CCCcccccceEEEEEeeHHHHHHCCCeeEEEE--EEEEEecCCCCCCCC-------CcCH--------HHHHHHHHHHHH
Confidence 1246679999999998631 121111 111100 00000111 1122 234467888899
Q ss_pred HhhchhCCCCCccccceecccCCc
Q 018515 227 KYEKLEGKQFSLSNADYFVFHSPY 250 (354)
Q Consensus 227 ~~g~~~~~~l~~~Did~~v~HQan 250 (354)
+++ ++++||||+-.|--+
T Consensus 417 ~AG------l~p~dIdyInaHGTG 434 (540)
T PLN02787 417 QSG------VSKEDVNYINAHATS 434 (540)
T ss_pred HcC------CCHHHCcEEEccCcc
Confidence 989 999999999999544
No 100
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=98.86 E-value=1.6e-08 Score=100.25 Aligned_cols=97 Identities=11% Similarity=0.092 Sum_probs=81.3
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCC-CCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHH
Q 018515 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDK-SKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV 128 (354)
Q Consensus 50 ~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~-~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~ 128 (354)
+.++.+|+.+|++++|+++|++|++||.+++++..+... ....+-.+...+|+ +.+++++-|+++|++++.|+..|.
T Consensus 23 ~~~~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl--~~~~p~~tV~~~CaSG~~A~~~A~ 100 (387)
T PRK07850 23 GLHAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGL--PYHVGATTIDCQCGSAQQANHLVA 100 (387)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCC--CCCCceEEEecccccHHHHHHHHH
Confidence 457899999999999999999999999999987442221 12345566667899 447999999999999999999999
Q ss_pred HHHHcCCCCCCEEEEEeecccc
Q 018515 129 NWVESSSWDGRYGLVVCTDSAV 150 (354)
Q Consensus 129 ~~i~sg~~~~~~vLVV~~e~~~ 150 (354)
..|++|.+ +.+|+++.|..+
T Consensus 101 ~~I~sG~~--dvvla~G~E~mS 120 (387)
T PRK07850 101 GLIAAGAI--DVGIACGVEAMS 120 (387)
T ss_pred HHHHCCCC--CEEEEEeEecCC
Confidence 99999965 999999999864
No 101
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=98.86 E-value=9e-09 Score=102.12 Aligned_cols=97 Identities=10% Similarity=0.132 Sum_probs=83.5
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHH
Q 018515 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN 129 (354)
Q Consensus 50 ~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~ 129 (354)
+.++.+|+.+|++++|+++|++|++||.+++++..+....+..+..+...+|+ +.+++++-|+.+|++++.|+..|..
T Consensus 24 ~~~~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl--~~~~p~~~V~~~CaSG~~Ai~~A~~ 101 (392)
T PRK06633 24 TTPAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGI--PKEVPGYTINKVCGSGLKSVALAAN 101 (392)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCC--CCCccchhhcchhHHHHHHHHHHHH
Confidence 56889999999999999999999999999998754333234456667788999 4469999999999999999999999
Q ss_pred HHHcCCCCCCEEEEEeecccc
Q 018515 130 WVESSSWDGRYGLVVCTDSAV 150 (354)
Q Consensus 130 ~i~sg~~~~~~vLVV~~e~~~ 150 (354)
.|++|.+ +.+|+++.|..+
T Consensus 102 ~I~sG~~--dvvla~G~E~ms 120 (392)
T PRK06633 102 SIMTGDN--EIVIAGGQENMS 120 (392)
T ss_pred HHHcCCC--CEEEEcccccCC
Confidence 9999966 999999999854
No 102
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=98.86 E-value=1.5e-08 Score=100.58 Aligned_cols=96 Identities=8% Similarity=0.043 Sum_probs=80.5
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHH
Q 018515 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN 129 (354)
Q Consensus 50 ~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~ 129 (354)
+.+..+|+.+|+++||+++|++++|||.+|+++..+....+..+..+...+|+ +.+++++-++.+|++++.++..|..
T Consensus 23 ~~~~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl--~~~~p~~~v~~~caSg~~av~~Aa~ 100 (388)
T PRK06366 23 KIKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGL--PFGVTKYTVNVVCASGMLAVESAAR 100 (388)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCC--CCCCcceeeechhhHHHHHHHHHHH
Confidence 36789999999999999999999999999998653222122346678899999 4468889999999999999999999
Q ss_pred HHHcCCCCCCEEEEEeeccc
Q 018515 130 WVESSSWDGRYGLVVCTDSA 149 (354)
Q Consensus 130 ~i~sg~~~~~~vLVV~~e~~ 149 (354)
.|++|.+ +.||+.+.|..
T Consensus 101 ~I~sG~~--d~vla~G~e~m 118 (388)
T PRK06366 101 EIMLGER--DLVIAGGMENM 118 (388)
T ss_pred HHhcCCC--CEEEEEeeEcc
Confidence 9999965 99998888974
No 103
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=98.86 E-value=1.4e-08 Score=101.20 Aligned_cols=97 Identities=8% Similarity=0.114 Sum_probs=83.9
Q ss_pred CCCHHHHHHHHHHHHHHH-cCCCcCCccEEEEeeccCCCC-CCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHH
Q 018515 50 VEDVISMSLTAVTNLLEK-YKIDPKQIGRLEVGSETVIDK-SKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC 127 (354)
Q Consensus 50 ~e~~~~La~~Aa~~aL~~-agi~~~dId~lI~aT~t~~~~-~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A 127 (354)
+.++.+|+.+|++++|++ +|+++++||.||+++..+... .+..+..+...+|+ +.+++++-|+.+|+++..|+..|
T Consensus 23 ~~~~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl--~~~vP~~tV~~aCaSG~~Ai~~A 100 (401)
T PRK09050 23 SVRADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGL--PVSVPGTTINRLCGSGMDAVGTA 100 (401)
T ss_pred CCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCC--CCCCceEEEecccccHHHHHHHH
Confidence 567889999999999996 799999999999997643222 24567778899999 56799999999999999999999
Q ss_pred HHHHHcCCCCCCEEEEEeecccc
Q 018515 128 VNWVESSSWDGRYGLVVCTDSAV 150 (354)
Q Consensus 128 ~~~i~sg~~~~~~vLVV~~e~~~ 150 (354)
.+.|++|.+ +.+|+++.|..+
T Consensus 101 ~~~I~sG~~--dvvlagGvEsmS 121 (401)
T PRK09050 101 ARAIKAGEA--ELMIAGGVESMS 121 (401)
T ss_pred HHHHHCCCC--CEEEEecccccc
Confidence 999999966 999999999854
No 104
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=98.85 E-value=1.9e-08 Score=99.93 Aligned_cols=96 Identities=10% Similarity=0.046 Sum_probs=80.0
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHH
Q 018515 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN 129 (354)
Q Consensus 50 ~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~ 129 (354)
+.+..+|+++|++++|+++|++++|||.+|+++.......+..+..+...+|+ +.+.+++.++.+|++++.++..|.+
T Consensus 22 ~~~~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl--~~~~p~~~v~~~caSg~~av~~Aa~ 99 (394)
T PLN02644 22 SLSATELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGL--PPSTICTTVNKVCASGMKAVMLAAQ 99 (394)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCC--CCCCceEEEeccchHHHHHHHHHHH
Confidence 46789999999999999999999999999987643212123344568888999 4568888899999999999999999
Q ss_pred HHHcCCCCCCEEEEEeeccc
Q 018515 130 WVESSSWDGRYGLVVCTDSA 149 (354)
Q Consensus 130 ~i~sg~~~~~~vLVV~~e~~ 149 (354)
.|++|.+ +.|||++.|..
T Consensus 100 ~I~sG~~--d~vlv~G~E~~ 117 (394)
T PLN02644 100 SIQLGIN--DVVVAGGMESM 117 (394)
T ss_pred HHHcCCC--CEEEEEeEEec
Confidence 9999965 99999998874
No 105
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=98.83 E-value=2.3e-08 Score=99.55 Aligned_cols=97 Identities=11% Similarity=0.123 Sum_probs=84.0
Q ss_pred CCCHHHHHHHHHHHHHHH-cCCCcCCccEEEEeeccCCCC-CCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHH
Q 018515 50 VEDVISMSLTAVTNLLEK-YKIDPKQIGRLEVGSETVIDK-SKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC 127 (354)
Q Consensus 50 ~e~~~~La~~Aa~~aL~~-agi~~~dId~lI~aT~t~~~~-~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A 127 (354)
+.++.+|+.+|++.+|++ +|++|++||.+|+++..+... .+..+..+...+|+ +.+++++-|+++|++++.|+.+|
T Consensus 23 ~~~~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl--~~~vp~~tV~~~CaSG~~Av~~A 100 (400)
T PRK13359 23 SVRADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGL--PHGVPGSTINRLCGSGMDAVGVA 100 (400)
T ss_pred CCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCC--CCCCceEEEeccchhHHHHHHHH
Confidence 356789999999999997 599999999999997653322 26678888899999 55699999999999999999999
Q ss_pred HHHHHcCCCCCCEEEEEeecccc
Q 018515 128 VNWVESSSWDGRYGLVVCTDSAV 150 (354)
Q Consensus 128 ~~~i~sg~~~~~~vLVV~~e~~~ 150 (354)
.+.|++|.+ +.+|+++.|..+
T Consensus 101 ~~~I~sG~~--divlagGvEsmS 121 (400)
T PRK13359 101 ARAIKSGEA--ALMIAGGVESMS 121 (400)
T ss_pred HHHHHcCCC--CEEEEeeeeccC
Confidence 999999965 999999999854
No 106
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=98.83 E-value=1.5e-08 Score=101.72 Aligned_cols=97 Identities=20% Similarity=0.243 Sum_probs=80.5
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHH
Q 018515 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN 129 (354)
Q Consensus 50 ~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~ 129 (354)
+.+..+|+.+|++++|+++|+++++||.+|+++..+....+.++-.+.-..|+ +..++++-|+++|++++.|+.+|..
T Consensus 28 ~~~~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl--~~~~p~~~V~~~CaSG~~A~~~a~~ 105 (430)
T TIGR02446 28 GIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGM--NVHTDAYSVTRACATSFQSAVNVAE 105 (430)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCC--CCCCchhhhhhhhhHHHHHHHHHHH
Confidence 56789999999999999999999999999999755422122344444444699 4479999999999999999999999
Q ss_pred HHHcCCCCCCEEEEEeecccc
Q 018515 130 WVESSSWDGRYGLVVCTDSAV 150 (354)
Q Consensus 130 ~i~sg~~~~~~vLVV~~e~~~ 150 (354)
.|++|.+ +.+|+++.|..+
T Consensus 106 ~I~sG~~--dvvla~G~E~mS 124 (430)
T TIGR02446 106 SIMAGAI--DIGIAGGADSSS 124 (430)
T ss_pred HHHCCCC--CEEEEeeeEccc
Confidence 9999966 999999999864
No 107
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=98.82 E-value=5.5e-08 Score=94.87 Aligned_cols=171 Identities=11% Similarity=-0.027 Sum_probs=110.3
Q ss_pred HHHHHHHHHHHHHHHcCC--CcCCccEEEEeeccCCC----------------C---------CC-cHHHHHHHHhcCCC
Q 018515 53 VISMSLTAVTNLLEKYKI--DPKQIGRLEVGSETVID----------------K---------SK-SIKTFLMQIFEKFG 104 (354)
Q Consensus 53 ~~~La~~Aa~~aL~~agi--~~~dId~lI~aT~t~~~----------------~---------~p-~~a~~v~~~LGl~g 104 (354)
...++..|+++||+++|+ +++++..++-.+ .+.. . +| ..+.+|...+|++|
T Consensus 4 ~~~~~~~a~~~a~~~a~~~~~~~r~Gv~~G~~-~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l~G 82 (342)
T PRK14691 4 WWRYKWITFHPSLTHADNTEKQERTATIIGAG-IGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFKG 82 (342)
T ss_pred HHHHHHHHHHHHHHhCCCCCCcccEEEEEecC-cccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCCCC
Confidence 456899999999999995 667776555332 2111 0 11 25678888999965
Q ss_pred CCCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeeccc-c------------c----C--CC---------CC
Q 018515 105 NTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA-V------------Y----A--EG---------PA 156 (354)
Q Consensus 105 ~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~-~------------~----~--~~---------~~ 156 (354)
+ ++-+..+|++++.||..|..+|+.|.. +.+||.++|.. . . . +. ..
T Consensus 83 p----~~ti~~aCaSg~~Al~~A~~~I~~G~~--d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~ 156 (342)
T PRK14691 83 P----IGAPVTACAAGVQAIGDAVRMIRNNEA--DVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTARD 156 (342)
T ss_pred C----ccccccHhHHHHHHHHHHHHHHHcCCC--CEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCCCC
Confidence 3 455789999999999999999999966 89999998862 1 0 0 00 02
Q ss_pred CCcccceeEEEEeccCC-----C--ceeeeccccccccccccccccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHhh
Q 018515 157 RPTGGAAAVVMLVGPDA-----P--VAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYE 229 (354)
Q Consensus 157 ~~~~GDGAaA~ll~~~~-----~--~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~dg~~~~~~~~~~~~~~i~~~l~~~g 229 (354)
.++.||||+++||++.. + +.... .|.... .+..... . +..+ -....++++++|++++
T Consensus 157 G~v~gEGAa~lvLes~~~A~~rG~~i~a~I--~g~~~~--~d~~~~~--~--p~p~--------~~~~~~ai~~AL~~Ag 220 (342)
T PRK14691 157 GFVMGEGAGLLIIEELEHALARGAKPLAEI--VGYGTS--ADAYHMT--S--GAED--------GDGAYRAMKIALRQAG 220 (342)
T ss_pred CccccceEEEEEEeeHHHHHhCCCCceEEE--EEEEEE--cCCCCCC--C--CCCC--------HHHHHHHHHHHHHHcC
Confidence 36679999999998532 1 11110 111000 0000000 0 1011 1334568889999999
Q ss_pred chhCCCCCccccceecccCCchH
Q 018515 230 KLEGKQFSLSNADYFVFHSPYNK 252 (354)
Q Consensus 230 ~~~~~~l~~~Did~~v~HQan~~ 252 (354)
++++||||+-.|-.+..
T Consensus 221 ------l~p~dIdyIeaHgtgT~ 237 (342)
T PRK14691 221 ------ITPEQVQHLNAHATSTP 237 (342)
T ss_pred ------CCHHHCCEEEecCCCCc
Confidence 99999999999965544
No 108
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=98.81 E-value=3.3e-08 Score=99.45 Aligned_cols=96 Identities=16% Similarity=0.132 Sum_probs=79.1
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCC--ccEEEEeeccCCC--CCCcHHHHHHHHhcCCCC------CCeeEEeecCcChH
Q 018515 50 VEDVISMSLTAVTNLLEKYKIDPKQ--IGRLEVGSETVID--KSKSIKTFLMQIFEKFGN------TDIEGVDSTNACYG 119 (354)
Q Consensus 50 ~e~~~~La~~Aa~~aL~~agi~~~d--Id~lI~aT~t~~~--~~p~~a~~v~~~LGl~g~------~~~~a~Di~~aC~g 119 (354)
+.+..+|+.+|+++||+++|++++| ||.+|+++..+.. ..+..+..+...+|+ + ..++++-|+.+|++
T Consensus 45 ~~s~~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~~a~~~~~~~gl--~~~~~gl~~~p~~~V~~~caS 122 (438)
T PTZ00455 45 NKTLEELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQ--SGASNALLYKPAMRVEGACAS 122 (438)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccchHHHHHHhccC--cccccccCCCceeEEECcCHH
Confidence 5678999999999999999999999 9999988653222 124456666655555 2 46788999999999
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEEeeccc
Q 018515 120 GTAALFNCVNWVESSSWDGRYGLVVCTDSA 149 (354)
Q Consensus 120 ~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~ 149 (354)
++.++..|...|++|.+ +.|||+++|..
T Consensus 123 G~~Ai~~A~~~I~sG~~--dvvlv~G~E~m 150 (438)
T PTZ00455 123 GGLAVQSAWEALLAGTS--DIALVVGVEVQ 150 (438)
T ss_pred HHHHHHHHHHHHHCCCC--CEEEEEEEeec
Confidence 99999999999999966 99999999974
No 109
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=98.80 E-value=2.8e-08 Score=98.92 Aligned_cols=97 Identities=10% Similarity=0.123 Sum_probs=83.7
Q ss_pred CCCHHHHHHHHHHHHHHH-cCCCcCCccEEEEeeccCCCC-CCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHH
Q 018515 50 VEDVISMSLTAVTNLLEK-YKIDPKQIGRLEVGSETVIDK-SKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC 127 (354)
Q Consensus 50 ~e~~~~La~~Aa~~aL~~-agi~~~dId~lI~aT~t~~~~-~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A 127 (354)
+.++.+|+.+|++.+|++ +|+++++||.+++++..+... .+..+..+...+|+ +.+++++-|+++|++++.|+..|
T Consensus 22 ~~~~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl--~~~~p~~~V~~~CaSG~~Ai~~a 99 (400)
T TIGR02430 22 SVRADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGL--PVSVPGTTVNRLCGSGLDAIGMA 99 (400)
T ss_pred CCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCC--CCCCceEEeechhhhHHHHHHHH
Confidence 567789999999999995 699999999999997543222 25567779999999 44799999999999999999999
Q ss_pred HHHHHcCCCCCCEEEEEeecccc
Q 018515 128 VNWVESSSWDGRYGLVVCTDSAV 150 (354)
Q Consensus 128 ~~~i~sg~~~~~~vLVV~~e~~~ 150 (354)
...|++|.+ +.+|+++.|..+
T Consensus 100 ~~~I~sG~~--d~~la~G~E~ms 120 (400)
T TIGR02430 100 ARAIKAGEA--DLLIAGGVESMS 120 (400)
T ss_pred HHHHHCCCC--CEEEEecccccc
Confidence 999999965 999999999854
No 110
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=98.79 E-value=3.3e-08 Score=99.32 Aligned_cols=94 Identities=7% Similarity=-0.084 Sum_probs=76.6
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcH-HHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHH
Q 018515 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSI-KTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV 128 (354)
Q Consensus 50 ~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~-a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~ 128 (354)
+.+..+|+.+|++.||+++|++++|||.+++++.+.....+.. ...+...||+ +..++..++.+|+++..++..|.
T Consensus 34 ~~~~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl---~~~~~~~v~~~~aSg~~ai~~A~ 110 (430)
T PRK06365 34 YMDFRERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGL---VPKPSKRIEGGGATGGLAFQAGY 110 (430)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCC---CCCceEEEeCCcHHHHHHHHHHH
Confidence 4567899999999999999999999999887653322211222 3446789999 34788899999999999999999
Q ss_pred HHHHcCCCCCCEEEEEeecc
Q 018515 129 NWVESSSWDGRYGLVVCTDS 148 (354)
Q Consensus 129 ~~i~sg~~~~~~vLVV~~e~ 148 (354)
..|++|.+ +.|||+++|.
T Consensus 111 ~~I~sG~~--~~vLv~G~e~ 128 (430)
T PRK06365 111 EEIASGRM--DCVAVYGFET 128 (430)
T ss_pred HHHHcCCC--CEEEEEEeee
Confidence 99999965 9999999884
No 111
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=98.77 E-value=4.8e-08 Score=96.92 Aligned_cols=97 Identities=12% Similarity=0.151 Sum_probs=78.8
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCC-CCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHH
Q 018515 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDK-SKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV 128 (354)
Q Consensus 50 ~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~-~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~ 128 (354)
+.+..+|+.+|++.+|+++|+++++||.+|+++..+... .+..+..+.-..|+ +.+++++-|+.+|++++.|+..|.
T Consensus 23 ~~~~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl--~~~vP~~tV~~~CaSG~~Ai~~A~ 100 (390)
T PRK06504 23 GWHPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKL--PESVPGTSIDRQCGSSQQALHFAA 100 (390)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCC--CCCCceEEEechhhHHHHHHHHHH
Confidence 567899999999999999999999999999987542221 13333332223377 557899999999999999999999
Q ss_pred HHHHcCCCCCCEEEEEeecccc
Q 018515 129 NWVESSSWDGRYGLVVCTDSAV 150 (354)
Q Consensus 129 ~~i~sg~~~~~~vLVV~~e~~~ 150 (354)
+.|++|.+ +.+|+++.|..+
T Consensus 101 ~~I~sG~~--dvvLagGvEsmS 120 (390)
T PRK06504 101 QAVMSGTM--DIVIAAGVESMT 120 (390)
T ss_pred HHHHCCCC--CEEEEeeeeecC
Confidence 99999966 999999999853
No 112
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.75 E-value=2.3e-07 Score=92.32 Aligned_cols=161 Identities=11% Similarity=-0.008 Sum_probs=106.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcC-----CccEEEEeeccCCC-------------------------------------CCC
Q 018515 53 VISMSLTAVTNLLEKYKIDPK-----QIGRLEVGSETVID-------------------------------------KSK 90 (354)
Q Consensus 53 ~~~La~~Aa~~aL~~agi~~~-----dId~lI~aT~t~~~-------------------------------------~~p 90 (354)
...|+..|+++||+++|+++. +++. +++|..+.. .+|
T Consensus 73 ~~~~a~~Aa~~Al~dAGl~~~~~~~~r~Gv-ivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 151 (398)
T PRK06519 73 WQRLGTYAAGLALDDAGIKGNEELLSTMDM-IVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLS 151 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCccceEE-EEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhh
Confidence 556999999999999998543 3434 444433220 012
Q ss_pred c-HHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeeccc-c------c------C----
Q 018515 91 S-IKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA-V------Y------A---- 152 (354)
Q Consensus 91 ~-~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~-~------~------~---- 152 (354)
+ .+..|...+|++|+ ++-+..+|++++.||..|..+|++|.. +.+||.++|.. . + .
T Consensus 152 n~~a~~is~~~gl~Gp----~~ti~~acaSg~~Ai~~A~~~I~~G~~--d~~lvGG~d~~~~~~~~~~~~~~~~ls~~~~ 225 (398)
T PRK06519 152 NLLAGNISIVHKVTGS----SRTFMGEESAGVSAIEIAFARIASGQS--DHALVGGAYNAERPDMLLLYELGGLLLKGGW 225 (398)
T ss_pred hHHHHHHHHHhCCCCc----cccccCCccHHHHHHHHHHHHHHcCCC--CEEEEeeeccccCHHHHHHHHHcCccCCCCC
Confidence 2 56678889999652 466899999999999999999999965 99999999862 1 0 0
Q ss_pred -C---C----CCCCcccceeEEEEeccCC-----C--ceeeeccccccccccccccccCCCCCccccCCcchHHHHHHHH
Q 018515 153 -E---G----PARPTGGAAAVVMLVGPDA-----P--VAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMAL 217 (354)
Q Consensus 153 -~---~----~~~~~~GDGAaA~ll~~~~-----~--~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~dg~~~~~~~~~~~ 217 (354)
+ . ...++.|.||++++|++.. . +.-+ ..|...+ . . +. ++ ..+
T Consensus 226 ~p~~d~~~~~r~G~v~GEGAa~lvLE~~~~A~~Rga~i~Ae--I~G~~~d----~-~-------~~-~~--------~~~ 282 (398)
T PRK06519 226 APVWSRGGEDGGGFILGSGGAFLVLESREHAEARGARPYAR--ISGVESD----R-A-------RR-AP--------GDL 282 (398)
T ss_pred CchhccCccCCCCeeeeceEEEEEEeeHHHHHhCCCceEEE--EEEEeec----C-C-------CC-Ch--------HHH
Confidence 0 0 1235569999999998642 1 1111 1111100 0 0 00 01 134
Q ss_pred HHHHHHHHHHhhchhCCCCCccccceecccCCc
Q 018515 218 DTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPY 250 (354)
Q Consensus 218 ~~~i~~~l~~~g~~~~~~l~~~Did~~v~HQan 250 (354)
..+++..|+.++ + ++||||+..|-.+
T Consensus 283 ~~am~~AL~~Ag------l-~~~IdyI~ahgtg 308 (398)
T PRK06519 283 EASLERLLKPAG------G-LAAPTAVISGATG 308 (398)
T ss_pred HHHHHHHHHHCC------C-cccCCEEEeCCCC
Confidence 578889999989 9 7999999999443
No 113
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=98.73 E-value=5.4e-08 Score=96.55 Aligned_cols=96 Identities=14% Similarity=0.105 Sum_probs=81.4
Q ss_pred CCCHHHHHHHHHHHHHHH-cCCCcCCccEEEEeeccCCCC-CCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHH
Q 018515 50 VEDVISMSLTAVTNLLEK-YKIDPKQIGRLEVGSETVIDK-SKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC 127 (354)
Q Consensus 50 ~e~~~~La~~Aa~~aL~~-agi~~~dId~lI~aT~t~~~~-~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A 127 (354)
+.+..+|+..+++.+|++ +|+++++||.+|+++..+... .+..+..+...+|+ +.+++++-|+.+|++++.|+..|
T Consensus 24 ~~~~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl--~~~~p~~~V~~~caSG~~Ai~~A 101 (387)
T PRK08947 24 NVRAEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGI--PHSVPAVTVNRLCGSSMQALHDA 101 (387)
T ss_pred CCCHHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCC--CCCCcceeeechhHHHHHHHHHH
Confidence 567789999999999996 799999999999997543222 23456667888999 44699999999999999999999
Q ss_pred HHHHHcCCCCCCEEEEEeeccc
Q 018515 128 VNWVESSSWDGRYGLVVCTDSA 149 (354)
Q Consensus 128 ~~~i~sg~~~~~~vLVV~~e~~ 149 (354)
..+|++|.+ +.+||++.|..
T Consensus 102 ~~~I~sG~~--d~vlv~G~E~m 121 (387)
T PRK08947 102 ARAIMTGDG--DVFLIGGVEHM 121 (387)
T ss_pred HHHHHCCCC--CEEEEcccccc
Confidence 999999966 99999999974
No 114
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.69 E-value=3.6e-07 Score=91.60 Aligned_cols=170 Identities=10% Similarity=0.046 Sum_probs=107.2
Q ss_pred HHHHHHHHHHHHHHcCC---CcCCccEEEEeeccCCC-------------------------CCC-cHHHHHHHHhcCCC
Q 018515 54 ISMSLTAVTNLLEKYKI---DPKQIGRLEVGSETVID-------------------------KSK-SIKTFLMQIFEKFG 104 (354)
Q Consensus 54 ~~La~~Aa~~aL~~agi---~~~dId~lI~aT~t~~~-------------------------~~p-~~a~~v~~~LGl~g 104 (354)
.-|+..|+++||+++|+ +++++..+ ++|..+.. ..| ..+.++...+|++|
T Consensus 84 ~~~~l~aa~~AledAg~~~~~~~r~Gv~-~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~G 162 (418)
T PRK07910 84 QRMSTVLGRRVWENAGSPEVDTNRLMVS-IGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHAKA 162 (418)
T ss_pred HHHHHHHHHHHHHHcCCCCCCcccEEEE-EEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCCCC
Confidence 44889999999999996 45566544 44432111 112 25667788888854
Q ss_pred CCCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeeccc-c-------------cC-----CC---------CC
Q 018515 105 NTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA-V-------------YA-----EG---------PA 156 (354)
Q Consensus 105 ~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~-~-------------~~-----~~---------~~ 156 (354)
+ .+-+..+|++++.||..|.++|++|.+ +.+||.++|.. . .. +. ..
T Consensus 163 ~----~~ti~taCaS~~~Al~~A~~~I~~G~~--d~aivgg~~~~~~~~~~~~f~~~~~~ls~~~~~~~~~~rPFd~~~~ 236 (418)
T PRK07910 163 G----VITPVSACASGSEAIAQAWRQIVLGEA--DIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKDRD 236 (418)
T ss_pred C----cccccchhHHHHHHHHHHHHHHHcCCC--CEEEEccccccCCHHHHHHHHhcCCccccCCCCCCCCcCCCcCCCC
Confidence 2 455789999999999999999999965 99999999862 1 01 00 02
Q ss_pred CCcccceeEEEEeccCC-----C--ceeeeccccccccccccccccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHhh
Q 018515 157 RPTGGAAAVVMLVGPDA-----P--VAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYE 229 (354)
Q Consensus 157 ~~~~GDGAaA~ll~~~~-----~--~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~dg~~~~~~~~~~~~~~i~~~l~~~g 229 (354)
.+++|+|++++||++.. + +... ..|.... .|-... ..+..++ ....+++++++++++
T Consensus 237 G~v~gEGaa~vvLe~~~~A~~rg~~i~a~--i~g~~~~--~dg~~~----~~~~~~~--------~~~~~a~~~Al~~ag 300 (418)
T PRK07910 237 GFVFGEGGALMVIETEEHAKARGANILAR--IMGASIT--SDGFHM----VAPDPNG--------ERAGHAMTRAIELAG 300 (418)
T ss_pred CEeeeceEEEEEEeeHHHHHhCCCcEEEE--EEEEEEe--cCCCCC----CCCCCCH--------HHHHHHHHHHHHHhC
Confidence 36679999999998632 1 1111 0111100 000000 0010111 233467888999988
Q ss_pred chhCCCCCccccceecccCCchH
Q 018515 230 KLEGKQFSLSNADYFVFHSPYNK 252 (354)
Q Consensus 230 ~~~~~~l~~~Did~~v~HQan~~ 252 (354)
++++|||++-.|-.+.+
T Consensus 301 ------i~~~did~ie~hgtgt~ 317 (418)
T PRK07910 301 ------LTPGDIDHVNAHATGTS 317 (418)
T ss_pred ------CCHHHCCEEEcCCcCCC
Confidence 99999999999965543
No 115
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=98.67 E-value=7.9e-08 Score=95.30 Aligned_cols=97 Identities=14% Similarity=0.116 Sum_probs=79.7
Q ss_pred CCCHHHHHHHHHHHHHHH-cCCCcCCccEEEEeeccCCCC-CCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHH
Q 018515 50 VEDVISMSLTAVTNLLEK-YKIDPKQIGRLEVGSETVIDK-SKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC 127 (354)
Q Consensus 50 ~e~~~~La~~Aa~~aL~~-agi~~~dId~lI~aT~t~~~~-~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A 127 (354)
+.++.+|+.+|++.+|++ +|++|++||.+++++..+... .+..+..+....|+ +..++++.|+.+|++++.|+..|
T Consensus 22 ~~~~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~--~~~~p~~tV~~~CaSG~~Ai~~A 99 (385)
T TIGR02445 22 NTRAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQI--PHTSAAVTVNRLCGSSMQALHDA 99 (385)
T ss_pred CCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCC--CCCcchhhhhhhhHHHHHHHHHH
Confidence 567789999999999997 599999999999997532111 23355555556788 55689999999999999999999
Q ss_pred HHHHHcCCCCCCEEEEEeecccc
Q 018515 128 VNWVESSSWDGRYGLVVCTDSAV 150 (354)
Q Consensus 128 ~~~i~sg~~~~~~vLVV~~e~~~ 150 (354)
.+.|++|.+ +.+|+++.|..+
T Consensus 100 a~~I~sG~~--d~vlagG~E~ms 120 (385)
T TIGR02445 100 ARAIMTGDA--DVCLVGGVEHMG 120 (385)
T ss_pred HHHHHCCCC--CEEEEeeehhcc
Confidence 999999965 999999999753
No 116
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=98.66 E-value=1.6e-07 Score=94.38 Aligned_cols=97 Identities=13% Similarity=0.142 Sum_probs=78.4
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHH
Q 018515 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN 129 (354)
Q Consensus 50 ~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~ 129 (354)
+.+..+|+.+|++.+|+++|+++++||.+++++..+....+..+..+.-..|+ +...+++-|+.+|++++.++..|..
T Consensus 28 ~~~~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~~~~~~r~~~l~~gl--~~~~p~~~V~~~CaSG~~ai~~A~~ 105 (427)
T PRK09268 28 DASNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTRECVLGSAL--SPYTPAYDLQQACGTGLEAAILVAN 105 (427)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCccccHHHHHHHHcCC--CCCCceeeeechhhHHHHHHHHHHH
Confidence 46789999999999999999999999999999754321112344444444556 4457889999999999999999999
Q ss_pred HHHcCCCCCCEEEEEeecccc
Q 018515 130 WVESSSWDGRYGLVVCTDSAV 150 (354)
Q Consensus 130 ~i~sg~~~~~~vLVV~~e~~~ 150 (354)
.|++|.+ +.+|+++.|..+
T Consensus 106 ~I~sG~~--d~vlvgG~E~ms 124 (427)
T PRK09268 106 KIALGQI--DSGIAGGVDTTS 124 (427)
T ss_pred HHHCCCC--CEEEEeeEEccC
Confidence 9999966 999999999853
No 117
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=98.64 E-value=1.7e-07 Score=93.03 Aligned_cols=91 Identities=4% Similarity=-0.059 Sum_probs=74.1
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHH
Q 018515 49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV 128 (354)
Q Consensus 49 ~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~ 128 (354)
++.+..+|+.+|+++||+++|++++|||.+++.+..+. .....+++.||+ ...+...+..+|+++..++..|.
T Consensus 21 ~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~~~----~~~~~~~~~lGl---~~~~~~~v~~gg~s~~~a~~~A~ 93 (388)
T PRK08142 21 PDKSVAQLHAEVAKGALADAGLSLADVDGYFCAGDAPG----LGPASMVDYLGL---KLRHVDSTETGGSSYLAHVGHAA 93 (388)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCCC----ccHHHHHHhCCC---CCeeeccccCCcHHHHHHHHHHH
Confidence 45678999999999999999999999999875322111 112458899999 34566778899999999999999
Q ss_pred HHHHcCCCCCCEEEEEeecc
Q 018515 129 NWVESSSWDGRYGLVVCTDS 148 (354)
Q Consensus 129 ~~i~sg~~~~~~vLVV~~e~ 148 (354)
..|++|.+ +.||||+.|.
T Consensus 94 ~~I~sG~~--d~vLvvg~e~ 111 (388)
T PRK08142 94 QAIAAGKC--SVALITLAGR 111 (388)
T ss_pred HHHHcCCC--CEEEEEeeee
Confidence 99999966 9999998775
No 118
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=98.64 E-value=1.6e-07 Score=93.06 Aligned_cols=95 Identities=13% Similarity=0.132 Sum_probs=74.2
Q ss_pred CCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccC-CCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHH
Q 018515 51 EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETV-IDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN 129 (354)
Q Consensus 51 e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~-~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~ 129 (354)
.+..+|+.+|+++||+++|++++|||.+|+++... ....+..+..+.-.+|+ +..++++.++.+|++++.++..|.+
T Consensus 24 ~~~~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl--~~~~p~~~v~~acaSg~~Av~~Aa~ 101 (382)
T PRK07801 24 VHPADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGL--PEEVPGVTVDRQCGSSQQAIHFAAQ 101 (382)
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCC--CCCCceeeecchhhhHHHHHHHHHH
Confidence 57899999999999999999999999999985311 11112223322234677 3457788899999999999999999
Q ss_pred HHHcCCCCCCEEEEEeeccc
Q 018515 130 WVESSSWDGRYGLVVCTDSA 149 (354)
Q Consensus 130 ~i~sg~~~~~~vLVV~~e~~ 149 (354)
.|++|.+ +.|||++.|..
T Consensus 102 ~I~sG~~--d~vLv~G~e~m 119 (382)
T PRK07801 102 AVMSGTQ--DLVVAGGVQNM 119 (382)
T ss_pred HHHCCCC--CEEEEcchhhh
Confidence 9999966 99999888853
No 119
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....
Probab=98.63 E-value=2.5e-07 Score=85.78 Aligned_cols=113 Identities=20% Similarity=0.163 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcc-----EEEEeeccCCC-------------------C----CCc-HHHHHHHHhcCC
Q 018515 53 VISMSLTAVTNLLEKYKIDPKQIG-----RLEVGSETVID-------------------K----SKS-IKTFLMQIFEKF 103 (354)
Q Consensus 53 ~~~La~~Aa~~aL~~agi~~~dId-----~lI~aT~t~~~-------------------~----~p~-~a~~v~~~LGl~ 103 (354)
...|+..|+.+||+++|+++.+++ .|+++|..+++ . .|+ .+.+|+..+|++
T Consensus 87 ~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~ 166 (254)
T PF00109_consen 87 QSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILFGLR 166 (254)
T ss_dssp HHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHHTB-
T ss_pred hhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccchhhhcCCC
Confidence 457999999999999999995432 24556554421 0 222 577899999995
Q ss_pred CCCCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeecc-cc------------cCC---------CCCCCccc
Q 018515 104 GNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDS-AV------------YAE---------GPARPTGG 161 (354)
Q Consensus 104 g~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~-~~------------~~~---------~~~~~~~G 161 (354)
|+ ++-+..+|+++++||..|..+|++|.+ +.+||.++|. .+ ... ....+++|
T Consensus 167 G~----~~tv~~acaSgl~Al~~A~~~I~~G~~--d~~lvgg~d~~~~~~~~~~~~~~~~~s~~~~~~pf~~~~~G~v~g 240 (254)
T PF00109_consen 167 GP----SYTVSTACASGLAALEAAYRAIRSGEA--DVALVGGVDAPLSPFILAGFSALGALSADGPCRPFDPFADGFVLG 240 (254)
T ss_dssp SS----EEEEE-GGGHHHHHHHHHHHHHHTTSS--SEEEEEEEE--SSHHHHHHHHHTTBB-TTSGGGSTBTTB-SB-BB
T ss_pred Cc----cccccccccccccccchhccccccccc--cccccccccccccccccccccccccccccccccccCCCCCCEEEE
Confidence 52 455789999999999999999999965 9999999994 21 011 11247789
Q ss_pred ceeEEEEecc
Q 018515 162 AAAVVMLVGP 171 (354)
Q Consensus 162 DGAaA~ll~~ 171 (354)
+||+++||++
T Consensus 241 EGa~~~vLe~ 250 (254)
T PF00109_consen 241 EGAGALVLER 250 (254)
T ss_dssp -EEEEEEEEE
T ss_pred CceEEEEEEE
Confidence 9999999975
No 120
>PRK07855 lipid-transfer protein; Provisional
Probab=98.52 E-value=5.4e-07 Score=89.42 Aligned_cols=89 Identities=9% Similarity=-0.039 Sum_probs=72.8
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHH
Q 018515 49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV 128 (354)
Q Consensus 49 ~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~ 128 (354)
++.+..+|+.+|+++||+++|++++|||.+++.+. ...+. ..+++.||+ .+..+...+..+|+++..++..|.
T Consensus 20 ~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~---~~~~~--~~l~~~lGl--~~~~~~~~v~~gg~sg~~~~~~A~ 92 (386)
T PRK07855 20 SGRSELRLACEAVLAALDDAGLAPSDVDGLVTFTM---DTNPE--IAVARALGI--GELKFFSRIHYGGGAACATVQQAA 92 (386)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecC---ccccH--HHHHHHCCC--CCCcceeeecCCcHHHHHHHHHHH
Confidence 35678999999999999999999999999987432 11222 468899999 322344578899999999999999
Q ss_pred HHHHcCCCCCCEEEEEee
Q 018515 129 NWVESSSWDGRYGLVVCT 146 (354)
Q Consensus 129 ~~i~sg~~~~~~vLVV~~ 146 (354)
..|++|.+ +.|||++.
T Consensus 93 ~~I~sG~~--d~vLv~g~ 108 (386)
T PRK07855 93 MAVATGVA--DVVVCYRA 108 (386)
T ss_pred HHHHCCCC--CEEEEEee
Confidence 99999966 99999976
No 121
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=98.50 E-value=8.8e-07 Score=88.31 Aligned_cols=97 Identities=11% Similarity=0.075 Sum_probs=85.5
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCC-CCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHH
Q 018515 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDK-SKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV 128 (354)
Q Consensus 50 ~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~-~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~ 128 (354)
+.++.+|++.+.+.+|+++|++|++||.||++...+... .+..+-+..-..|+ +.+++++-|+..|+|++.++..|.
T Consensus 26 ~~~~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~agl--p~~vp~~tvnr~C~Sgl~ai~~aa 103 (417)
T PRK06025 26 HLHPQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGY--DIKASGVTLDRFCGGGITSVNLAA 103 (417)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCC--CCCCCeeeeccccchHHHHHHHHH
Confidence 568899999999999999999999999999997654432 35678788888899 788999999999999999999999
Q ss_pred HHHHcCCCCCCEEEEEeecccc
Q 018515 129 NWVESSSWDGRYGLVVCTDSAV 150 (354)
Q Consensus 129 ~~i~sg~~~~~~vLVV~~e~~~ 150 (354)
..|++|.. +-+|..+.|..+
T Consensus 104 ~~I~~G~~--~~~laGG~EsmS 123 (417)
T PRK06025 104 AQIMSGME--DLVIAGGTEMMS 123 (417)
T ss_pred HHHHcCCC--CEEEEeeeeccC
Confidence 99999955 999999999964
No 122
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.49 E-value=2.6e-06 Score=84.84 Aligned_cols=172 Identities=15% Similarity=0.143 Sum_probs=110.7
Q ss_pred CHHHHHHHHHHHHHHHcCCC-cCCcc--E-EEEeeccCCCC--------------------------CCc-HHHHHHHHh
Q 018515 52 DVISMSLTAVTNLLEKYKID-PKQIG--R-LEVGSETVIDK--------------------------SKS-IKTFLMQIF 100 (354)
Q Consensus 52 ~~~~La~~Aa~~aL~~agi~-~~dId--~-lI~aT~t~~~~--------------------------~p~-~a~~v~~~L 100 (354)
....|++.|+++||+++|++ ..+.+ . ++++|..+... +|. .+..++..+
T Consensus 70 ~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~~ 149 (412)
T COG0304 70 RFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIVF 149 (412)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHHh
Confidence 45779999999999999998 33343 2 23444211100 122 466788899
Q ss_pred cCCCCCCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeeccc---------------ccC-CC----------
Q 018515 101 EKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA---------------VYA-EG---------- 154 (354)
Q Consensus 101 Gl~g~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~---------------~~~-~~---------- 154 (354)
|++|+ .+-+..+|+++.+++..|.++|+.|.. +.+|+-++|.. +.. ++
T Consensus 150 g~~G~----~~~~~tACatg~~AIg~A~~~I~~G~a--d~~iaGG~e~~i~~~~i~gF~am~Alst~nd~p~~asrPfd~ 223 (412)
T COG0304 150 GLKGP----NYTPVTACATGAHAIGDAVRLIRLGKA--DVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPFDK 223 (412)
T ss_pred CCCCC----cCChhhhHHhHHHHHHHHHHHHHcCCC--CEEEEcccccccCHHHHHHHHHHHHhccCCCCccccCCCCCC
Confidence 99653 455799999999999999999999965 99999999762 111 10
Q ss_pred -CCCCcccceeEEEEeccCC-------CceeeeccccccccccccccccCCCCCccccCCcchHHHHHHHHHHHHHHHHH
Q 018515 155 -PARPTGGAAAVVMLVGPDA-------PVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCS 226 (354)
Q Consensus 155 -~~~~~~GDGAaA~ll~~~~-------~~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~dg~~~~~~~~~~~~~~i~~~l~ 226 (354)
...++.|.||+++||+.-+ .+.-+....|...+. +..-.|. .+|. ...++++..|+
T Consensus 224 ~RdGfv~gEGag~lVLE~~ehA~aRGA~Iyaei~G~g~~~Da-~h~t~P~-------p~g~--------Ga~~am~~AL~ 287 (412)
T COG0304 224 NRDGFVIGEGAGALVLEELEHALARGAKIYAEIVGYGTTSDA-YHITAPA-------PDGE--------GAIRAMRAALA 287 (412)
T ss_pred CCCCEEEecceeEEEecChhhHHhCCCceEEEEEEEEecccc-cccCCCC-------CCCc--------hHHHHHHHHHH
Confidence 1236779999999998642 121111111111111 1111222 1232 22378889999
Q ss_pred HhhchhCCCCCccccceecccCCch
Q 018515 227 KYEKLEGKQFSLSNADYFVFHSPYN 251 (354)
Q Consensus 227 ~~g~~~~~~l~~~Did~~v~HQan~ 251 (354)
.++ ++++||||+-.|--+.
T Consensus 288 ~Ag------l~~~~idYinaHgTsT 306 (412)
T COG0304 288 DAG------LTPEDIDYINAHGTST 306 (412)
T ss_pred HcC------CCHhHCCEEeCCCccC
Confidence 999 9999999999995443
No 123
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=98.45 E-value=1.3e-06 Score=89.37 Aligned_cols=92 Identities=10% Similarity=0.047 Sum_probs=75.1
Q ss_pred CHHHHHHHHHHHHHHHcCCC--cCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHH
Q 018515 52 DVISMSLTAVTNLLEKYKID--PKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN 129 (354)
Q Consensus 52 ~~~~La~~Aa~~aL~~agi~--~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~ 129 (354)
+..+|+.+|+++||+++|++ ++|||.+++++..... .......++++||+ .+ ........||.+...++..|..
T Consensus 26 s~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~~-~~~~~~~la~~lGl--~p-~~~~~~~~GG~s~~~~v~~Aa~ 101 (498)
T PRK08257 26 EPVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSWR-YRDPPGLLAERLGA--DP-ARTVYSPVGGNSPQRLVNEAAL 101 (498)
T ss_pred CHHHHHHHHHHHHHHhcCCCcCHHHCCEEEEecccccc-ccCHHHHHHHHcCC--CC-cceeEecCCCHHHHHHHHHHHH
Confidence 78899999999999999999 9999999987542211 12235789999999 33 3344567889999999999999
Q ss_pred HHHcCCCCCCEEEEEeeccc
Q 018515 130 WVESSSWDGRYGLVVCTDSA 149 (354)
Q Consensus 130 ~i~sg~~~~~~vLVV~~e~~ 149 (354)
.|++|.+ +.|||+++|..
T Consensus 102 ~IasG~a--dvVLv~G~E~~ 119 (498)
T PRK08257 102 RIAAGEA--DVALVAGAEAQ 119 (498)
T ss_pred HHHCCCC--CEEEEeeeeec
Confidence 9999966 99999999984
No 124
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=98.44 E-value=1.2e-06 Score=86.72 Aligned_cols=92 Identities=12% Similarity=0.059 Sum_probs=69.1
Q ss_pred CCCCHHHHHHHHHHHHHHHcC-CCc-CCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHH
Q 018515 49 EVEDVISMSLTAVTNLLEKYK-IDP-KQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFN 126 (354)
Q Consensus 49 ~~e~~~~La~~Aa~~aL~~ag-i~~-~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~ 126 (354)
++.+..+|+.+|+++||+++| +++ +|||.+++++.............+.+.||+.+ .+.+-+ |+++..++..
T Consensus 21 ~~~s~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~~~~~~~~~~~~~~~~~lg~~~---~~~~~v---~~sg~~a~~~ 94 (385)
T PRK06066 21 PEVSFREMMFEAASRAYKDAGNINPRRDVDSFISCQEDFWEGIAIADEFAPDQIGGAM---RPTMTV---AGDGLQGLAH 94 (385)
T ss_pred CCCCHHHHHHHHHHHHHHhcCCCCChhcCCEEEEecCcccCcccccchhHHHHcccCC---CCeEEE---eCcHHHHHHH
Confidence 467889999999999999999 997 79999987542111111122345678899832 223334 8899999999
Q ss_pred HHHHHHcCCCCCCEEEEEeecc
Q 018515 127 CVNWVESSSWDGRYGLVVCTDS 148 (354)
Q Consensus 127 A~~~i~sg~~~~~~vLVV~~e~ 148 (354)
|...|++|.+ +.|||++.|.
T Consensus 95 A~~aV~sG~~--d~vLv~g~~~ 114 (385)
T PRK06066 95 AVMHINSGLA--NVVVVEAHSK 114 (385)
T ss_pred HHHHHHcCCC--CEEEEEEEee
Confidence 9999999966 9999999773
No 125
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=98.27 E-value=1.4e-05 Score=94.64 Aligned_cols=131 Identities=13% Similarity=0.025 Sum_probs=84.9
Q ss_pred HHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeeccc-c------c------CC-----
Q 018515 92 IKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA-V------Y------AE----- 153 (354)
Q Consensus 92 ~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~-~------~------~~----- 153 (354)
.+.+|...+|++|+ ++-|..+|+|++.||+.|.+.|++|.+ +.+|+-+++.. . + ..
T Consensus 185 ~A~RIS~~f~L~Gp----s~tVdtACsSSL~Al~~A~~~L~~G~~--D~alvGGv~~~~~p~~~~~fs~~~~lS~~g~cr 258 (2582)
T TIGR02813 185 ISGRIANRFDLGGM----NCVVDAACAGSLAAIRMALSELLEGRS--EMMITGGVCTDNSPFMYMSFSKTPAFTTNEDIQ 258 (2582)
T ss_pred HHHHHHHHhCCCCC----cccccchhHHHHHHHHHHHHHHHcCCC--CEEEEecceeeCCHHHHHHHHhccCcCCCCCcc
Confidence 57789999999663 456899999999999999999999965 99999887752 0 0 11
Q ss_pred ----CCCCCcccceeEEEEeccCC-------CceeeeccccccccccccccccCCCCCccccCCcchHHHHHHHHHHHHH
Q 018515 154 ----GPARPTGGAAAVVMLVGPDA-------PVAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYK 222 (354)
Q Consensus 154 ----~~~~~~~GDGAaA~ll~~~~-------~~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~dg~~~~~~~~~~~~~~i~ 222 (354)
+...++.|+|+++++|++-. .+.-. ..|..... |-... +...|.. +...++++
T Consensus 259 pFD~~adG~v~GEGag~vvLkrL~dA~~dGd~IyAv--I~G~g~~~--DG~~~--~itaP~~----------~gq~~~i~ 322 (2582)
T TIGR02813 259 PFDIDSKGMMIGEGIGMMALKRLEDAERDGDRIYAV--IKGVGASS--DGKFK--SIYAPRP----------EGQAKALK 322 (2582)
T ss_pred CCCCCCCcccccceEEEEEeCcHHHHHhCCCcEEEE--EEEEEEcC--CCCCC--CCcCCCH----------HHHHHHHH
Confidence 11246779999999998621 12111 01111110 00000 0000111 12246788
Q ss_pred HHHHHhhchhCCCCCccccceecccCCc
Q 018515 223 CLCSKYEKLEGKQFSLSNADYFVFHSPY 250 (354)
Q Consensus 223 ~~l~~~g~~~~~~l~~~Did~~v~HQan 250 (354)
+.++++| ++++||||+-.|--+
T Consensus 323 ~Al~~Ag------i~p~~I~yIeaHGTG 344 (2582)
T TIGR02813 323 RAYDDAG------FAPHTCGLIEAHGTG 344 (2582)
T ss_pred HHHHHcC------CCHHHCCEEEecCCC
Confidence 8999989 999999999999533
No 126
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=98.26 E-value=7.3e-05 Score=70.61 Aligned_cols=180 Identities=14% Similarity=0.075 Sum_probs=100.8
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHHHHH
Q 018515 53 VISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVE 132 (354)
Q Consensus 53 ~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~~i~ 132 (354)
-+.|-.+|++.||+++++.++|||+++-+--- .+. -.+++.++.|++ | -|-+=.+|+.+.-+|.+|..++.
T Consensus 51 E~~m~~~A~~~al~Ka~l~~~dId~~~aGDLl--nQ~-i~s~f~ar~l~i---P---f~GlygACST~~e~l~laa~~vd 121 (329)
T PF07451_consen 51 ESKMQKEAVELALKKAGLKKEDIDYLFAGDLL--NQI-ISSSFAARDLGI---P---FLGLYGACSTMMESLALAAMLVD 121 (329)
T ss_dssp HHHHHHHHHHHHHHHTT--GGG-SEEEEEETT--CCC-CHHHHHHHHHT--------EEEB--CCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCeEEEehhhh--hhh-HHHHHHHHhcCC---C---ccchhhHHHHHHHHHHHHHHHHh
Confidence 35689999999999999999999999987422 222 457888999998 3 45677899999999999999999
Q ss_pred cCCCCCCEEEEEeecc-c------ccCCC------CCCCcccceeEEEEeccCCC-ceeeeccccccccccccccccCCC
Q 018515 133 SSSWDGRYGLVVCTDS-A------VYAEG------PARPTGGAAAVVMLVGPDAP-VAFESKLRGSHMSHAYDFYKPNLA 198 (354)
Q Consensus 133 sg~~~~~~vLVV~~e~-~------~~~~~------~~~~~~GDGAaA~ll~~~~~-~~~~~~~~g~~~~~~~~~~~p~~~ 198 (354)
+|.. ++||..++-- + +|... .+....-=||+|+||++.+. ..+...+.|.-.+ +...+|
T Consensus 122 gg~a--~~vla~tSSH~~tAERQfR~P~EyG~Qrp~tAqwTVTGaGa~il~~~~~~p~It~~T~GkVvD--~G~~D~--- 194 (329)
T PF07451_consen 122 GGFA--DYVLAATSSHFATAERQFRFPTEYGGQRPPTAQWTVTGAGAAILSKEGSGPRITHATIGKVVD--MGIKDP--- 194 (329)
T ss_dssp TTS---SEEEEEEEE-CCHHHHHT---GGGT----TT--EE--EEEEEEEESS--SEEEEEEE----B---SS---T---
T ss_pred CCCc--ceEEEEeccccchhhhhccCchhccCCCCCcccEEEeceEEEEEecCCCCcEEEEEEEEEEEE--cCCCCc---
Confidence 9954 9999887643 1 33221 12222234666778887542 2222223333221 111122
Q ss_pred CCccccCCcchHHHHH-HHHHHHHHHHHHHhhchhCCCCCccccceecccC---CchHHHHHHHHHhhh
Q 018515 199 SEYPVVDGKLSQTCYL-MALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHS---PYNKLVQKSFARLLF 263 (354)
Q Consensus 199 ~~~~~~dg~~~~~~~~-~~~~~~i~~~l~~~g~~~~~~l~~~Did~~v~HQ---an~~ii~~~~~~l~~ 263 (354)
+.|-..+ .+--..|...++..+ .+++|.|.+|.-- .+.+|+.+++++-|+
T Consensus 195 ---------~nMGaAMAPAA~dTI~~h~~D~g------~~p~dYDlIvTGDLg~vG~~il~~Ll~~~G~ 248 (329)
T PF07451_consen 195 ---------NNMGAAMAPAAADTIEQHFKDTG------RSPDDYDLIVTGDLGKVGRKILRDLLKEKGY 248 (329)
T ss_dssp ---------T-HHHHHHHHHHHHHHHHHHHCT--------GGG-SEEEESS-HHHHHHHHHHHHHHTT-
T ss_pred ---------ccchhhHhHHHHHHHHHHHHHhC------CChhhcCeEEecchHHHHHHHHHHHHHHcCC
Confidence 1122111 222344556667777 9999999999743 445566666666665
No 127
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.11 E-value=0.00011 Score=81.69 Aligned_cols=166 Identities=16% Similarity=0.139 Sum_probs=113.1
Q ss_pred HHHHHHHHHHHHcCCCcCCcc----EEEEeeccCCCCCCc-------------------HHHHHHHHhcCCCCCCeeEEe
Q 018515 56 MSLTAVTNLLEKYKIDPKQIG----RLEVGSETVIDKSKS-------------------IKTFLMQIFEKFGNTDIEGVD 112 (354)
Q Consensus 56 La~~Aa~~aL~~agi~~~dId----~lI~aT~t~~~~~p~-------------------~a~~v~~~LGl~g~~~~~a~D 112 (354)
|..+-+.+||+++|+.++.+. .|+.+..+.+|.... ++.+|...|+++| +++.
T Consensus 94 llLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy~l~l~G----Ps~~ 169 (1061)
T COG3321 94 LLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGLSG----PSVT 169 (1061)
T ss_pred HHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHHHHHhcCCC----CCcc
Confidence 889999999999999999998 466666666664321 5778999999965 3577
Q ss_pred ecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeeccc-----cc--------CC-C--------CCCCcccceeEEEEec
Q 018515 113 STNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA-----VY--------AE-G--------PARPTGGAAAVVMLVG 170 (354)
Q Consensus 113 i~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~-----~~--------~~-~--------~~~~~~GDGAaA~ll~ 170 (354)
|..+|++.+.|+++|.+.|++|.+ .-+|+=+.... .+ .. . ...+..|.|++++++.
T Consensus 170 vdtaCSSsLvAvhlA~~sL~~Ge~--d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~~adG~v~geG~g~vvLK 247 (1061)
T COG3321 170 VDTACSSSLVAVHLACQSLRLGEC--DLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADADGYVRGEGAGVVVLK 247 (1061)
T ss_pred ccchhhHHHHHHHHHHHHHHcCCC--CEEEecceEeccCCcceeeeecccCcCCCCcceecccCCCCEEEeeeEEEEEEE
Confidence 999999999999999999999954 77776665542 00 11 0 1235679999999997
Q ss_pred cCC-------Cceeeecccccccccc---ccccccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHhhchhCCCCCccc
Q 018515 171 PDA-------PVAFESKLRGSHMSHA---YDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSN 240 (354)
Q Consensus 171 ~~~-------~~~~~~~~~g~~~~~~---~~~~~p~~~~~~~~~dg~~~~~~~~~~~~~~i~~~l~~~g~~~~~~l~~~D 240 (354)
+-. .+... ..|+..... ..+..|+ .+.-...+++.|+.++ +++++
T Consensus 248 rl~~A~~dgd~Iyav--I~gsavn~dG~~~gltaP~-----------------~~aQ~~v~~~al~~a~------i~p~t 302 (1061)
T COG3321 248 RLSDAERDGDRIYAV--IRGSAVNQDGRSNGLTAPN-----------------LEAQADVIREALADAG------IDPAT 302 (1061)
T ss_pred EhHHHHhCCCeEEEE--EEeeeeccCCCcCCCCCCC-----------------HHHHHHHHHHHHHhcC------CCccc
Confidence 521 12111 112211100 0111111 1334577888899988 99999
Q ss_pred cceecccCCchH
Q 018515 241 ADYFVFHSPYNK 252 (354)
Q Consensus 241 id~~v~HQan~~ 252 (354)
|+|+=.|..+..
T Consensus 303 v~yvEaHgTGT~ 314 (1061)
T COG3321 303 VQYVEAHGTGTP 314 (1061)
T ss_pred CcEEEecCCCCC
Confidence 999999975543
No 128
>PRK07937 lipid-transfer protein; Provisional
Probab=98.07 E-value=2.3e-05 Score=76.82 Aligned_cols=89 Identities=13% Similarity=0.033 Sum_probs=62.8
Q ss_pred CCH-HHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCC--cHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHH
Q 018515 51 EDV-ISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSK--SIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC 127 (354)
Q Consensus 51 e~~-~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p--~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A 127 (354)
.+. .+|+.+|+++||+++|++++|||.++.++ .+.... .....+...+|+ .+..+..-+. +++..++..|
T Consensus 21 ~~~~~el~~eA~~~Al~DAgl~~~dID~~~~~~--~~~~~~~~~~~~~~~~~~G~--~~~~~~~~v~---~~g~~a~~~A 93 (352)
T PRK07937 21 TTNGVEMLMPCFAELYAELGITKSDIGFWCSGS--SDYLAGRAFSFISAIDSIGA--VPPINESHVE---MDAAWALYEA 93 (352)
T ss_pred CCcHHHHHHHHHHHHHHHcCCCHHHCCEEEEEc--cccccccccchhhHHhhccC--CCCCceEEec---CcHHHHHHHH
Confidence 444 79999999999999999999999886442 222111 122335566787 2222222233 3577799999
Q ss_pred HHHHHcCCCCCCEEEEEeecc
Q 018515 128 VNWVESSSWDGRYGLVVCTDS 148 (354)
Q Consensus 128 ~~~i~sg~~~~~~vLVV~~e~ 148 (354)
...|++|.+ +.|||++.|.
T Consensus 94 ~~aI~sG~~--d~VLv~g~~k 112 (352)
T PRK07937 94 WVKLLTGEV--DTALVYGFGK 112 (352)
T ss_pred HHHHhcCCC--CEEEEEEecc
Confidence 999999966 9999999874
No 129
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=97.84 E-value=6.7e-05 Score=74.68 Aligned_cols=95 Identities=14% Similarity=0.120 Sum_probs=73.6
Q ss_pred CHHHHHHHHHHHHHHHc--CCCcCCccEEEEeeccCCC-CCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHH
Q 018515 52 DVISMSLTAVTNLLEKY--KIDPKQIGRLEVGSETVID-KSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCV 128 (354)
Q Consensus 52 ~~~~La~~Aa~~aL~~a--gi~~~dId~lI~aT~t~~~-~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~ 128 (354)
...++.....+..+++. ++++.+||.+|+++..+.. ..+..+.+++..+|+ +.+++++.|+.+|++++.++..|.
T Consensus 26 ~~e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl--~~~~p~~~V~~~c~SG~~Av~~A~ 103 (392)
T COG0183 26 AAEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGL--PGSVPAVTVNRACASGLAAVRLAA 103 (392)
T ss_pred CHHHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCC--CCCCCceEEeccchhHHHHHHHHH
Confidence 34445544444444332 5777778888988655442 356788899999999 456999999999999999999999
Q ss_pred HHHHcCCCCCCEEEEEeecccc
Q 018515 129 NWVESSSWDGRYGLVVCTDSAV 150 (354)
Q Consensus 129 ~~i~sg~~~~~~vLVV~~e~~~ 150 (354)
..|++|.+ +.||+++.|..+
T Consensus 104 ~~I~sG~~--dvvlagG~E~mS 123 (392)
T COG0183 104 QAIASGEA--DVVLAGGVEKMS 123 (392)
T ss_pred HHHHCCCC--CEEEEEeeeecc
Confidence 99999965 999999999954
No 130
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.63 E-value=0.00027 Score=68.02 Aligned_cols=219 Identities=17% Similarity=0.178 Sum_probs=126.7
Q ss_pred ceeEEeEEEEecCCccccHHHHHHhh----CCCc---chhh----hcccceeEeecCC------C----CCHHHHHHHHH
Q 018515 3 KNVGILAMDIYFPPTCVQQEALEAHD----GASK---GKYT----IGLGQECMAFCSE------V----EDVISMSLTAV 61 (354)
Q Consensus 3 ~~v~I~~ig~ylP~~~v~~~el~~~~----g~~~---~~i~----~~~Gi~~r~~~~~------~----e~~~~La~~Aa 61 (354)
..|.|.|+|...|=-.=...-+...+ |+.. ..+. +.-|.-.| |..+ + .+..-|+..|+
T Consensus 24 rRVVITGmG~VTplG~~v~~~w~~Ll~GesGI~~l~~~d~k~~p~~v~g~Ip~-f~~e~~~s~~~~r~ms~~~~~al~aa 102 (440)
T KOG1394|consen 24 RRVVITGMGAVTPLGNGVHTSWRNLLSGESGISSLEGPDYKSIPFTVAGKIPR-FSVEDYVSKGDERRMSKFTKLALTAA 102 (440)
T ss_pred eeEEEeccceeecCCCChHHHHHHhhccccCcccccccccccCcchheeeccc-cccccccchhhhhhhhHHHHHHHHHH
Confidence 46889999999987765555555443 2210 0110 01111111 1111 1 14567999999
Q ss_pred HHHHHHcCCCcC---Ccc----EEEEeecc---------------------CCCCCCc-----HHHHHHHHhcCCCCCCe
Q 018515 62 TNLLEKYKIDPK---QIG----RLEVGSET---------------------VIDKSKS-----IKTFLMQIFEKFGNTDI 108 (354)
Q Consensus 62 ~~aL~~agi~~~---dId----~lI~aT~t---------------------~~~~~p~-----~a~~v~~~LGl~g~~~~ 108 (354)
++||+++++.+. +.| .+.++|.- .++..|- .+.+|.-++|++|+.+
T Consensus 103 ~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm~~gl~Gpnh- 181 (440)
T KOG1394|consen 103 EEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSMKYGLRGPNH- 181 (440)
T ss_pred HHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhhhhcCcCCch-
Confidence 999999998765 222 23344421 1222332 3567888999976543
Q ss_pred eEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEe-ecccc---------------c-CCCC-----------CCCcc
Q 018515 109 EGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVC-TDSAV---------------Y-AEGP-----------ARPTG 160 (354)
Q Consensus 109 ~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~-~e~~~---------------~-~~~~-----------~~~~~ 160 (354)
.++.+|+.+.+++-.|.++|+.|. ..++|.+ +|.+- . .+++ +.+..
T Consensus 182 ---svSTACATg~h~igda~n~Ir~Gd---aDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRPfD~~RdGFVm 255 (440)
T KOG1394|consen 182 ---SVSTACATGNHCIGDAFNFIRLGD---ADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRPFDKKRDGFVM 255 (440)
T ss_pred ---hhHhhhhhccchHHHHHHHHHhCc---cceeeccCcceeecchhhhhHHHHHHhhhcCCCccccCCCCccCCCceee
Confidence 378999999999999999999994 3455544 55530 1 1111 23667
Q ss_pred cceeEEEEeccC-------CCceeeeccccc-cccccccccccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHhhchh
Q 018515 161 GAAAVVMLVGPD-------APVAFESKLRGS-HMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLE 232 (354)
Q Consensus 161 GDGAaA~ll~~~-------~~~~~~~~~~g~-~~~~~~~~~~p~~~~~~~~~dg~~~~~~~~~~~~~~i~~~l~~~g~~~ 232 (354)
|.|++.++++.= .+|..+. .|. .+...+....| ..||. ....+++..|+.++
T Consensus 256 GEGagvlvlEelEHA~~RgA~I~AE~--lGygls~Da~HiT~P-------~~dG~--------Ga~~am~raL~~Ag--- 315 (440)
T KOG1394|consen 256 GEGAGVLVLEELEHAKKRGAPIYAEV--LGYGLSSDAYHITSP-------DPDGA--------GAVLAMERALKDAG--- 315 (440)
T ss_pred ccceeEEehHhHHHHHHcCCceeHHh--hcCcccccccccCCC-------CCCcc--------hHHHHHHHHHHHcC---
Confidence 999999999752 1232111 110 11111111122 23442 22356778888888
Q ss_pred CCCCCccccceecccCCchH
Q 018515 233 GKQFSLSNADYFVFHSPYNK 252 (354)
Q Consensus 233 ~~~l~~~Did~~v~HQan~~ 252 (354)
++++||||+=-|--+..
T Consensus 316 ---l~pe~i~YvNAHATST~ 332 (440)
T KOG1394|consen 316 ---LSPEDIDYVNAHATSTP 332 (440)
T ss_pred ---CChhhcCeeecccccCc
Confidence 99999999999964433
No 131
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=97.61 E-value=0.0001 Score=68.14 Aligned_cols=106 Identities=19% Similarity=0.139 Sum_probs=81.1
Q ss_pred hhcccceeEeec--CCCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEee
Q 018515 36 TIGLGQECMAFC--SEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDS 113 (354)
Q Consensus 36 ~~~~Gi~~r~~~--~~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di 113 (354)
..+.|..+.--+ .++.+-.||+.+|..+||+++++.-++|+--+++-..++. ....+....+|+ ..++.|.+
T Consensus 10 vvgvgmtkf~kpg~~~~~dypd~a~ea~tkal~da~ikys~vqqa~vgyvfgds---tcgqraiyevgm---tgipi~nv 83 (408)
T KOG1406|consen 10 VVGVGMTKFEKPGRVADWDYPDFAKEAITKALQDAGIKYSEVQQAVVGYVFGDS---TCGQRAIYEVGM---TGIPIYNV 83 (408)
T ss_pred EEecceeeecCCCcccCCCCchHHHHHHHHHHHhcCCCHHHHHhhhheeeecCC---ccchHHHHhccc---cCcceeec
Confidence 334555443222 2456778999999999999999999999876665443332 223444558899 67899999
Q ss_pred cCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeeccc
Q 018515 114 TNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA 149 (354)
Q Consensus 114 ~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~ 149 (354)
|+.|+.+..||.+|++.|++|.. ..||-.+=|..
T Consensus 84 nnncatgssalflakqiiesgn~--dcvlalgfekm 117 (408)
T KOG1406|consen 84 NNNCATGSSALFLAKQIIESGNS--DCVLALGFEKM 117 (408)
T ss_pred cCccccCchHHHHHHHHHhcCCc--ceEEeechhhh
Confidence 99999999999999999999954 89999988874
No 132
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=97.21 E-value=0.0013 Score=62.43 Aligned_cols=96 Identities=9% Similarity=0.085 Sum_probs=74.8
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHH
Q 018515 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN 129 (354)
Q Consensus 50 ~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~ 129 (354)
.-++.+|+.-|++.+|++++++++|++-+|++..-+-..--..+-+.+=--|| +.+++|.-+|..|++++-|+.+|.+
T Consensus 27 sl~A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~AnlGQapaRQaalgAGl--p~sv~~tTvNkvCaSgmKAv~laaQ 104 (396)
T KOG1390|consen 27 SLTATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGL--PYSVPATTVNKVCASGMKAVILAAQ 104 (396)
T ss_pred cCchhhHHHHHHHHHHHhcCCCHHHhhhhhhccccccccCcchHHHHHhhcCC--CcceeeEeehhhhhhhHHHHHHHHH
Confidence 45788999999999999999999999999988644333222333444334467 7789999999999999999999999
Q ss_pred HHHcCCCCCCEEEEEeeccc
Q 018515 130 WVESSSWDGRYGLVVCTDSA 149 (354)
Q Consensus 130 ~i~sg~~~~~~vLVV~~e~~ 149 (354)
-|+.|.. ..|+.-+-|.+
T Consensus 105 sI~~G~~--divVaGGmEsM 122 (396)
T KOG1390|consen 105 SIQTGHA--DIVVAGGMESM 122 (396)
T ss_pred HHhcCCc--cEEEecccchh
Confidence 9999943 66666566664
No 133
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=96.00 E-value=0.016 Score=53.79 Aligned_cols=97 Identities=12% Similarity=0.127 Sum_probs=73.7
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCC-C-CCCeeEEeecCcChHHHHHHHH
Q 018515 49 EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKF-G-NTDIEGVDSTNACYGGTAALFN 126 (354)
Q Consensus 49 ~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~-g-~~~~~a~Di~~aC~g~~~aL~~ 126 (354)
.+-++.+|.+-|++.||+.+++.++.+|.+|++..- .+.+-+.++.+..||+ | +.+.+++-||-=|-++..++..
T Consensus 24 Kg~~aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~---aSSsDgIYl~RHvGL~~GvP~e~pALtiNRLCGSGFQsiVN 100 (396)
T KOG1391|consen 24 KGLSATDLGVVAAKAALKAANVGAEAVDHVIMGNVL---ASSSDGIYLARHVGLRVGVPKETPALTINRLCGSGFQSIVN 100 (396)
T ss_pred cCcchhhHHHHHHHHHHhhcCCChhhcceEEEeeee---eccCCceEeeeccccccCCcCccCceeehhhhcccHHHHHh
Confidence 356788999999999999999999999999987521 1112234555555551 1 5678899999999999999999
Q ss_pred HHHHHHcCCCCCCEEEEEeecccc
Q 018515 127 CVNWVESSSWDGRYGLVVCTDSAV 150 (354)
Q Consensus 127 A~~~i~sg~~~~~~vLVV~~e~~~ 150 (354)
+.+-|.-|.. +-||.=+.|.++
T Consensus 101 gaQ~I~vgea--~ivL~GGtEnMS 122 (396)
T KOG1391|consen 101 GAQEICVGEA--EIVLCGGTENMS 122 (396)
T ss_pred hHHHhhcCcc--eEEEecCccccc
Confidence 9999998843 666666667643
No 134
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=95.23 E-value=0.019 Score=57.61 Aligned_cols=73 Identities=14% Similarity=0.154 Sum_probs=57.8
Q ss_pred HHHHHHHHHhhchhCCCCCccccceecccCCchHHHHHHHHHhhhhhhhhccccchhHhhhccCCCCCCCCCccccchhH
Q 018515 219 TCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESYQSRDL 298 (354)
Q Consensus 219 ~~i~~~l~~~g~~~~~~l~~~Did~~v~HQan~~ii~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (354)
.+++++|++++ ++++|||+|-+|+++..+....++.++++ .
T Consensus 319 ~Ai~~aL~~AG------l~~~DID~~ei~eaFa~~~l~~~~~lg~~------------------------~--------- 359 (417)
T PRK06025 319 PAAKKVLAKAG------LTKDDIDLWEINEAFAVVAEKFIRDLDLD------------------------R--------- 359 (417)
T ss_pred HHHHHHHHHcC------CCHHHCcEEEEchHHHHHHHHHHHHcCCC------------------------h---------
Confidence 67889999999 99999999999999999888888999852 1
Q ss_pred HHHHHhhhhhHHHhhcccccc---cccccCccchHHHHHHHHHHhccC
Q 018515 299 EKVSQQLAKPLYDAKVQPSTL---IPKQVGNMYTASLYAALASLIHNK 343 (354)
Q Consensus 299 ~~~~~~~~~~~~~~k~~~~~~---~~~~~GN~~saSip~~L~~~l~~~ 343 (354)
+++.++-. .=+-+||+++..++.++.++.+++
T Consensus 360 -------------~~vN~~GG~ia~GHp~GaTGa~~v~~ll~qL~~~g 394 (417)
T PRK06025 360 -------------DKVNVNGGAIALGHPIGATGSILIGTVLDELERRG 394 (417)
T ss_pred -------------hhccccCCHHhcCCchhHHHHHHHHHHHHHHHHhC
Confidence 33322211 124789999999999999987765
No 135
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain
Probab=95.20 E-value=0.27 Score=45.03 Aligned_cols=115 Identities=16% Similarity=0.102 Sum_probs=75.6
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCC---------------CCCc-HHHHHHH----HhcCCCCCCeeEE
Q 018515 52 DVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVID---------------KSKS-IKTFLMQ----IFEKFGNTDIEGV 111 (354)
Q Consensus 52 ~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~---------------~~p~-~a~~v~~----~LGl~g~~~~~a~ 111 (354)
..+-|++.++.+++.+. +++|.+||+|..++. .+|. .+.-|++ .+.+.-+......
T Consensus 33 ~~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~~~~~t 108 (218)
T PF13723_consen 33 RLSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKNTGPNT 108 (218)
T ss_pred HHHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCCCCceE
Confidence 36789999999998653 578899999975443 1232 2223333 2222101234556
Q ss_pred eecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeecccc---cCCCC-CCCcccceeEEEEeccCC
Q 018515 112 DSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAV---YAEGP-ARPTGGAAAVVMLVGPDA 173 (354)
Q Consensus 112 Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~~---~~~~~-~~~~~GDGAaA~ll~~~~ 173 (354)
-+..+=.+|-.||.-|..++..| . ++||||+.|-.. |.... .......-|.|+++++..
T Consensus 109 al~a~~~sf~~aLleA~~~l~~~-~--~~VLlv~~De~~p~~y~~~~~~~~~~~~~A~al~L~~~~ 171 (218)
T PF13723_consen 109 ALAAGEDSFEAALLEAAAQLAEG-A--EPVLLVCYDEPLPEPYQEFRPERDPPFPYALALVLSPGD 171 (218)
T ss_pred EEecCcchHHHHHHHHHHHHHcC-C--CCEEEEEeCCCCChhhhhcccccCCCcCEEEEEEecCCC
Confidence 67888899999999999999998 4 899999999842 22211 122334577888888654
No 136
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=95.19 E-value=0.037 Score=42.94 Aligned_cols=73 Identities=14% Similarity=0.099 Sum_probs=44.8
Q ss_pred HHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEee----cCcChHHHHHHHHHHHHHHcCCC-CCC
Q 018515 65 LEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDS----TNACYGGTAALFNCVNWVESSSW-DGR 139 (354)
Q Consensus 65 L~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di----~~aC~g~~~aL~~A~~~i~sg~~-~~~ 139 (354)
|+++|++++|||.+++...+ ......+.+.+|+ +++-....+ +.+|++-..+|..+.. .|.. +++
T Consensus 1 L~~~g~~~~did~~i~hq~~-----~~~~~~~~~~lgi--~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~---~g~~~~Gd 70 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQAS-----KKILDSIAKRLGI--PPERFPDNLAEYGNTGSASIPINLADALE---EGRIKPGD 70 (90)
T ss_dssp HHHTT--GGGESEEEE-SSS-----HHHHHHHHHHHTS---GGGBE-THHHH-B-GGGHHHHHHHHHHH---TTSSCTTE
T ss_pred CccccCCHHHCCEEEeCCCC-----HHHHHHHHHHcCC--cHHHHHHHHhccCcchhhhHHHHHHHHHH---cCCCCCCC
Confidence 68999999999999988533 2344558889999 433222222 3577777777776655 3311 457
Q ss_pred EEEEEeec
Q 018515 140 YGLVVCTD 147 (354)
Q Consensus 140 ~vLVV~~e 147 (354)
++|+++.-
T Consensus 71 ~vl~~~~G 78 (90)
T PF08541_consen 71 RVLLVGFG 78 (90)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 89888753
No 137
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=95.06 E-value=0.018 Score=54.25 Aligned_cols=90 Identities=17% Similarity=0.119 Sum_probs=68.6
Q ss_pred CCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHHH
Q 018515 51 EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNW 130 (354)
Q Consensus 51 e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~~ 130 (354)
--+.+|+.+|...+|++..++.+.||+||++|.-..-....+|-..+-.-|. +..+++--+..+|-+.-.|+.....+
T Consensus 64 lmphdlar~al~~ll~kt~lpke~~dyii~gtviqevktsniareaal~agf--sdktpahtvtmacissn~amttgmgl 141 (465)
T KOG1392|consen 64 LMPHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIAREAALLAGF--SDKTPAHTVTMACISSNVAMTTGMGL 141 (465)
T ss_pred hchhHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHhcchHHHHHHHhcCC--CCCCccceeeeehhccchhhhcccee
Confidence 3457899999999999999999999999999864333322344333333466 55677888999999999999999999
Q ss_pred HHcCCCCCCEEEEEe
Q 018515 131 VESSSWDGRYGLVVC 145 (354)
Q Consensus 131 i~sg~~~~~~vLVV~ 145 (354)
|.+|.+ .|+|-+
T Consensus 142 iatg~~---dvivag 153 (465)
T KOG1392|consen 142 IATGNA---DVIVAG 153 (465)
T ss_pred EeeCCc---CEEEEc
Confidence 999965 455544
No 138
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=94.96 E-value=0.064 Score=51.14 Aligned_cols=95 Identities=15% Similarity=0.199 Sum_probs=76.5
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHH-hcCCCCCCeeEEeecCcChHHHHHHHHHH
Q 018515 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQI-FEKFGNTDIEGVDSTNACYGGTAALFNCV 128 (354)
Q Consensus 50 ~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~-LGl~g~~~~~a~Di~~aC~g~~~aL~~A~ 128 (354)
+..+-+|-..+.+..+++.+++|+.|+-|+++|.-.+... .+.++++.. -|+ +..++..-+|--|++++.++....
T Consensus 58 dt~pDeLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~g-a~e~R~a~~~ag~--P~tvpv~tvNRqCsSGLqaVadiA 134 (435)
T KOG1389|consen 58 DTRPDELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGSG-ASECRMAAFYAGF--PETVPVRTVNRQCSSGLQAVADIA 134 (435)
T ss_pred cCChHHHHHHHHHHHHhhcCCCHHHhcceeeeeccCCCcc-hHHHHHHHHHcCC--CcccchhhhhhhhhhHHHHHHHHH
Confidence 5567789999999999999999999999999997654433 456655544 577 566666668999999999999999
Q ss_pred HHHHcCCCCCCEEEEEeeccc
Q 018515 129 NWVESSSWDGRYGLVVCTDSA 149 (354)
Q Consensus 129 ~~i~sg~~~~~~vLVV~~e~~ 149 (354)
.-|++|.| .-.|-.+.|..
T Consensus 135 ~~Ir~G~y--dIGla~GvESM 153 (435)
T KOG1389|consen 135 AKIRAGFY--DIGLAAGVESM 153 (435)
T ss_pred HHHhcCce--eeecccchhhh
Confidence 99999977 77777777764
No 139
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=93.08 E-value=0.29 Score=47.87 Aligned_cols=82 Identities=15% Similarity=0.175 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCC-ee-EE---ee-cCcChHHHHHHHH
Q 018515 53 VISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTD-IE-GV---DS-TNACYGGTAALFN 126 (354)
Q Consensus 53 ~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~-~~-a~---Di-~~aC~g~~~aL~~ 126 (354)
....+.++++++|+++|++++|||.+++...+ +.+-..+.++||+ +++ +. .+ ++ |.+|++...+|..
T Consensus 206 ~~~~~~~~~~~~L~~~gl~~~did~~i~Hq~~-----~~~~~~~~~~lgl--~~ek~~~~~~~~~~GNt~sAsipl~L~~ 278 (345)
T TIGR00748 206 YFHHVVTAAKGLMEKLGLTPEDFDYAVFHQPN-----GKFYLVAARMLGF--PKEQVKPGLLTPRIGNTYSGATPVGLSA 278 (345)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEeCCCC-----hHHHHHHHHHcCC--CHHHeeccccccccCchhhhHHHHHHHH
Confidence 45667789999999999999999999987322 2244557899998 322 21 11 45 4588898889987
Q ss_pred HHHHHHcCCCCCCEEEEEe
Q 018515 127 CVNWVESSSWDGRYGLVVC 145 (354)
Q Consensus 127 A~~~i~sg~~~~~~vLVV~ 145 (354)
+...++ +++++|+++
T Consensus 279 ~~~~~~----~Gd~vll~~ 293 (345)
T TIGR00748 279 VLDIAE----PGDRILAVS 293 (345)
T ss_pred HHHhcC----CCCEEEEEE
Confidence 765444 447788776
No 140
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=92.32 E-value=0.6 Score=46.20 Aligned_cols=86 Identities=12% Similarity=0.150 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHh-----cCCCCCC-e-eEEe-e-cCcChHHHHHHH
Q 018515 55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIF-----EKFGNTD-I-EGVD-S-TNACYGGTAALF 125 (354)
Q Consensus 55 ~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~L-----Gl~g~~~-~-~a~D-i-~~aC~g~~~aL~ 125 (354)
....++.+++|+++|+.++|||.++....+ +.+--.+.++| |+ +++ + ..++ + |.+|++...+|.
T Consensus 272 ~~~~~~i~~~L~~~gl~~~DId~~v~Hq~n-----~~~~~~v~~~l~~~~~gl--~~~k~~~~~~~~GNt~sAsipi~L~ 344 (378)
T PRK06816 272 VYTIKPLLELVDKRNLDPDDIDYFLPHYSS-----EYFREKIVELLAKAGFMI--PEEKWFTNLATVGNTGSASIYIMLD 344 (378)
T ss_pred HHHHHHHHHHHHHcCCChhhCCEEeeCccc-----HHHHHHHHHHHHhccCCC--ChhheEEeccccccccchHHHHHHH
Confidence 345788899999999999999999866322 23445666766 77 322 2 2232 4 468888888988
Q ss_pred HHHHHHHcCC-CCCCEEEEEeecccc
Q 018515 126 NCVNWVESSS-WDGRYGLVVCTDSAV 150 (354)
Q Consensus 126 ~A~~~i~sg~-~~~~~vLVV~~e~~~ 150 (354)
.+. +.|. -++++|++++++...
T Consensus 345 ~a~---~~g~~~~Gd~vl~~~~~s~~ 367 (378)
T PRK06816 345 ELL---NSGRLKPGQKILCFVPESGR 367 (378)
T ss_pred HHH---HcCCCCCCCEEEEEEecccc
Confidence 663 3332 145889999887744
No 141
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=91.85 E-value=0.48 Score=46.39 Aligned_cols=91 Identities=12% Similarity=-0.099 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHcCCCcCCccEEE-EeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEe----ec-CcChHHHHHHHHHHH
Q 018515 56 MSLTAVTNLLEKYKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVD----ST-NACYGGTAALFNCVN 129 (354)
Q Consensus 56 La~~Aa~~aL~~agi~~~dId~lI-~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~D----i~-~aC~g~~~aL~~A~~ 129 (354)
=..+|.+++|+++|++|+|||+|+ .+|.|+.. -..-+..+.+.+|-.. ...+..- ++ .+.+++...+..+..
T Consensus 235 gl~~ai~~AL~~agl~~~dId~v~ah~~gt~~~-d~~e~~A~~~~f~~~~-~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~ 312 (348)
T PRK06147 235 GLTQAIRAALAEAGCGLEDMDYRIADLNGEQYR-FKEAALAEMRLFRVRK-EFFDLWHPAECIGEIGAAIGPALLGVALA 312 (348)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEcCCCCCccc-hHHHHHHHHHHhhhcc-CCCceecchHhhcchHHHHHHHHHHHHHH
Confidence 345899999999999999999988 45444321 1122333444444310 1111111 22 244445555555666
Q ss_pred HHHcCCCCCCEEEEEeecc
Q 018515 130 WVESSSWDGRYGLVVCTDS 148 (354)
Q Consensus 130 ~i~sg~~~~~~vLVV~~e~ 148 (354)
.++.|..++.++||.+++-
T Consensus 313 ~~~~g~~~g~~~L~~s~~d 331 (348)
T PRK06147 313 ASRKGYGPGPNVLCHLSDD 331 (348)
T ss_pred HHHcCcCCCCcEEEEecCC
Confidence 7778866778899998765
No 142
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=91.03 E-value=1.9 Score=42.95 Aligned_cols=75 Identities=15% Similarity=0.079 Sum_probs=44.2
Q ss_pred cccHHHHHHhhCCCc-chhhhcccceeEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHH
Q 018515 18 CVQQEALEAHDGASK-GKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFL 96 (354)
Q Consensus 18 ~v~~~el~~~~g~~~-~~i~~~~Gi~~r~~~~~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v 96 (354)
+|.+++.++.++.++ .|+. +.|.. . ..+ .....-...|+++||+++|++++|||++-+-- ..+......
T Consensus 252 vl~see~A~~l~~~p~~~i~-g~~~~--~-~~~-~~~~~~~~~a~~~al~~agl~~~did~~ei~d-----~F~~~~l~~ 321 (387)
T PRK07850 252 LWMDEDRARALGLRPRARIV-AQALV--G-AEP-YYHLDGPVQATAKVLEKAGMKIGDIDLVEINE-----AFASVVLSW 321 (387)
T ss_pred EEecHHHHHHcCCCCcEEEE-EEEEe--c-cCc-hhhcchHHHHHHHHHHHcCCCHHHcCeeeecc-----cchHHHHHH
Confidence 455666666665433 3332 22221 1 111 22233457899999999999999999997742 233444455
Q ss_pred HHHhcC
Q 018515 97 MQIFEK 102 (354)
Q Consensus 97 ~~~LGl 102 (354)
.+.||+
T Consensus 322 ~e~lg~ 327 (387)
T PRK07850 322 AQVHEP 327 (387)
T ss_pred HHHcCC
Confidence 577887
No 143
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=89.73 E-value=2.2 Score=42.61 Aligned_cols=74 Identities=5% Similarity=0.034 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCC-Ce----eEEeecCcChHHHHHHHHHHHH
Q 018515 56 MSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNT-DI----EGVDSTNACYGGTAALFNCVNW 130 (354)
Q Consensus 56 La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~-~~----~a~Di~~aC~g~~~aL~~A~~~ 130 (354)
-...|+++||+++|++++|||++-+. +..........+.||+...+ +. .++---.|++|....+..+.++
T Consensus 298 ~~~~A~~~al~~Agi~~~did~~ei~-----D~f~~~~l~~~e~lg~~~~~vN~~GG~la~GHp~gasG~~~~~~~~~~L 372 (399)
T PRK09052 298 GPIEAIPAALKQAGLKQDDLDWIELN-----EAFAAQSLAVIRDLGLDPSKVNPLGGAIALGHPLGATGAIRTATVVHGL 372 (399)
T ss_pred hHHHHHHHHHHHcCCCHHHcCEEEeC-----cHHHHHHHHHHHHhCCCCcccCCCCchhhcCchHHHHHHHHHHHHHHHH
Confidence 44789999999999999999999722 22334455566778872110 11 1111112555655556666555
Q ss_pred HHcC
Q 018515 131 VESS 134 (354)
Q Consensus 131 i~sg 134 (354)
-..|
T Consensus 373 ~~~~ 376 (399)
T PRK09052 373 RRTN 376 (399)
T ss_pred HhcC
Confidence 4433
No 144
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=89.47 E-value=0.97 Score=43.66 Aligned_cols=83 Identities=7% Similarity=0.018 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCe--eEEe-e-cCcChHHHHHHHHHHHH
Q 018515 55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDI--EGVD-S-TNACYGGTAALFNCVNW 130 (354)
Q Consensus 55 ~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~--~a~D-i-~~aC~g~~~aL~~A~~~ 130 (354)
....++.+++|+++|++++|||.+++...+ +..-..+.++||+ +++- ..++ + |.++++...+|..+.
T Consensus 239 ~~~~~~~~~~L~~~g~~~~did~~i~H~~~-----~~~~~~~~~~lgl--~~~k~~~~~~~~GN~~sas~~~~L~~~~-- 309 (338)
T PRK09258 239 ELAVDTWEAFLAQLGWAVEQVDRVICHQVG-----AAHTRAILKALGI--DPEKVFTTFPTLGNMGPASLPITLAMAA-- 309 (338)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEecCCCC-----HHHHHHHHHHhCC--CHHHceehHhhhCCcHHhHHHHHHHHHH--
Confidence 455568889999999999999999887432 3345578889999 3221 2222 3 357777777776553
Q ss_pred HHcCCC-CCCEEEEEeec
Q 018515 131 VESSSW-DGRYGLVVCTD 147 (354)
Q Consensus 131 i~sg~~-~~~~vLVV~~e 147 (354)
+.|.. +++++|+++.-
T Consensus 310 -~~g~~~~Gd~vll~~~G 326 (338)
T PRK09258 310 -EEGFLKPGDRVALLGIG 326 (338)
T ss_pred -HhCCCCCCCEEEEEEec
Confidence 44321 45888888743
No 145
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=89.39 E-value=1.3 Score=42.66 Aligned_cols=80 Identities=9% Similarity=0.073 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCee--EEe-e-cCcChHHHHHHHHHHHHHH
Q 018515 57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIE--GVD-S-TNACYGGTAALFNCVNWVE 132 (354)
Q Consensus 57 a~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~--a~D-i-~~aC~g~~~aL~~A~~~i~ 132 (354)
..++.+++|+++|++++|||++++...+ +..-..+.++||+ +++-. .++ . |.+|++...+|..+ ++
T Consensus 228 ~~~~i~~~L~~~g~~~~did~~~~hq~~-----~~~~~~~~~~lgl--~~~k~~~~l~~~Gn~~sasi~~~L~~~---~~ 297 (326)
T CHL00203 228 VPAVIIKCLNALNISIDEVDWFILHQAN-----KRILEAIANRLSV--PNSKMITNLEKYGNTSAASIPLALDEA---IQ 297 (326)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECCCC-----HHHHHHHHHHhCC--CHHHhhhHHHhhCcHHHHHHHHHHHHH---HH
Confidence 4557899999999999999999987432 3345568999999 42221 222 2 34677777777655 44
Q ss_pred cCCC-CCCEEEEEee
Q 018515 133 SSSW-DGRYGLVVCT 146 (354)
Q Consensus 133 sg~~-~~~~vLVV~~ 146 (354)
.|.. +++++|+++.
T Consensus 298 ~g~~~~Gd~vll~~~ 312 (326)
T CHL00203 298 NNKIQPGQIIVLSGF 312 (326)
T ss_pred hCCCCCCCEEEEEEE
Confidence 4422 4578888763
No 146
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=89.34 E-value=2 Score=42.68 Aligned_cols=41 Identities=12% Similarity=0.125 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcC
Q 018515 57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK 102 (354)
Q Consensus 57 a~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl 102 (354)
...|+++||+++|+.|+|||.+-+.-+ .+.......+.||+
T Consensus 288 ~~~a~~~a~~~Agi~~~did~~e~~d~-----fa~~~~~~~e~lG~ 328 (386)
T TIGR01930 288 PVPAIPKALKKAGLSISDIDLFEINEA-----FAAQVLACIKELGL 328 (386)
T ss_pred HHHHHHHHHHHcCCCHHHCCeeehcch-----hHHHHHHHHHHhCC
Confidence 358999999999999999999944321 22333344567887
No 147
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=89.31 E-value=2 Score=43.03 Aligned_cols=41 Identities=15% Similarity=0.168 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcC
Q 018515 57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK 102 (354)
Q Consensus 57 a~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl 102 (354)
...|+++||+++|+.|+|||++-+. +..........+.||+
T Consensus 298 ~~~A~~~al~~AGl~~~DID~iei~-----dafa~~~l~~~e~lg~ 338 (400)
T PRK13359 298 PAPATQKLLARLGMTLDQFDVIELN-----EAFASQGLAVLRELGL 338 (400)
T ss_pred HHHHHHHHHHHhCCCHHHcCcCccC-----cHhHHHHHHHHHHcCC
Confidence 4689999999999999999998722 2233445566678887
No 148
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=89.22 E-value=1.5 Score=42.14 Aligned_cols=80 Identities=11% Similarity=0.042 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeE--E-eec-CcChHHHHHHHHHHHHH
Q 018515 56 MSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEG--V-DST-NACYGGTAALFNCVNWV 131 (354)
Q Consensus 56 La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a--~-Di~-~aC~g~~~aL~~A~~~i 131 (354)
...++.+++|+++|++++|||.+++...+. ..-..++++||+ +++-.. + +++ .+|++....|.. ++
T Consensus 231 ~~~~~i~~~L~~~gl~~~did~~~~H~~~~-----~~~~~i~~~l~l--~~e~~~~~~~~~Gn~~sas~~~~L~~---~~ 300 (329)
T PRK07204 231 YLMKFIDKLLMDAGYTLADIDLIVPHQASG-----PAMRLIRKKLGV--DEERFVTIFEDHGNMIAASIPVALFE---AI 300 (329)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEeCCCCH-----HHHHHHHHHcCC--CHHHhhhhHhhhCcHHHHHHHHHHHH---HH
Confidence 345788999999999999999999774321 234578999999 433211 1 232 355555556654 35
Q ss_pred HcCCC-CCCEEEEEe
Q 018515 132 ESSSW-DGRYGLVVC 145 (354)
Q Consensus 132 ~sg~~-~~~~vLVV~ 145 (354)
++|.. +++++|+++
T Consensus 301 ~~g~~~~Gd~vll~~ 315 (329)
T PRK07204 301 KQKKVQRGNKILLLG 315 (329)
T ss_pred HcCCCCCCCEEEEEE
Confidence 55421 457888776
No 149
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=89.20 E-value=0.96 Score=44.75 Aligned_cols=79 Identities=14% Similarity=0.073 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCee--EE-ee-cCcChHHHHHHHHHHHHHH
Q 018515 57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIE--GV-DS-TNACYGGTAALFNCVNWVE 132 (354)
Q Consensus 57 a~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~--a~-Di-~~aC~g~~~aL~~A~~~i~ 132 (354)
..++++++|+++|++++|||.+++...+ +.+-..++++||+ +++-. .+ ++ |.++++...+|..+ ++
T Consensus 282 ~~~~i~~~L~~~gl~~~dId~~v~Hq~n-----~~~~~~~~~~Lgl--~~ek~~~~l~~~GNt~sAsi~~~L~~~---~~ 351 (379)
T PLN02326 282 VPQVIESALQKAGLTAESIDWLLLHQAN-----QRIIDAVAQRLGI--PPEKVISNLANYGNTSAASIPLALDEA---VR 351 (379)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECCCC-----HHHHHHHHHHcCC--CHHHeeecHhhcCcHHHHHHHHHHHHH---HH
Confidence 4467889999999999999999877332 2334558999999 43322 22 23 35777777888755 34
Q ss_pred cCCC-CCCEEEEEe
Q 018515 133 SSSW-DGRYGLVVC 145 (354)
Q Consensus 133 sg~~-~~~~vLVV~ 145 (354)
.|.. +++++|+++
T Consensus 352 ~g~~~~Gd~vll~~ 365 (379)
T PLN02326 352 SGKVKKGDVIATAG 365 (379)
T ss_pred cCCCCCCCEEEEEE
Confidence 4422 457788876
No 150
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=89.15 E-value=2.1 Score=42.95 Aligned_cols=114 Identities=11% Similarity=0.073 Sum_probs=61.9
Q ss_pred cccHHHHHHhhCCC-cchhhhcccceeEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHH
Q 018515 18 CVQQEALEAHDGAS-KGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFL 96 (354)
Q Consensus 18 ~v~~~el~~~~g~~-~~~i~~~~Gi~~r~~~~~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v 96 (354)
++..++.++.+|.. ..||. +.+.. .. .+... ..-...|+++||+++|++++|||++-+- +..+......
T Consensus 267 vl~s~e~A~~~g~~p~a~I~-g~~~~--~~-~~~~~-~~~~~~a~~~al~~AGl~~~DID~~ei~-----daFa~~~l~~ 336 (402)
T PRK08242 267 LIGSEEAGKALGLKPRARIV-ATATI--GS-DPTIM-LTGPVPATRKALAKAGLTVDDIDLFELN-----EAFASVVLRF 336 (402)
T ss_pred EEecHHHHHHcCCCCcEEEE-EEEEe--cC-Cchhh-cccHHHHHHHHHHHcCCCHHHCCEEEec-----chhhHHHHHH
Confidence 56777777777753 34442 22222 11 11111 1112579999999999999999999753 2234445566
Q ss_pred HHHhcCCCC-CCe----eEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEE
Q 018515 97 MQIFEKFGN-TDI----EGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVV 144 (354)
Q Consensus 97 ~~~LGl~g~-~~~----~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV 144 (354)
.+.||+... -++ .++---.|++|....+.++..+-+.| +++.|+.
T Consensus 337 ~e~lG~~~~~vN~~GG~la~GHP~GAsG~~~~~~l~~~L~~~~---~~~g~~~ 386 (402)
T PRK08242 337 MQALDIPHDKVNVNGGAIAMGHPLGATGAMILGTVLDELERRG---KRTALIT 386 (402)
T ss_pred HHHhCCCCcCCCcCCCHHhcCCcHHHHHHHHHHHHHHHHHhcC---CCeEEEE
Confidence 788897211 010 11111125566665566665554433 2555554
No 151
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=89.03 E-value=1.5 Score=41.91 Aligned_cols=80 Identities=15% Similarity=0.011 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCee--EE-eec-CcChHHHHHHHHHHHHHH
Q 018515 57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIE--GV-DST-NACYGGTAALFNCVNWVE 132 (354)
Q Consensus 57 a~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~--a~-Di~-~aC~g~~~aL~~A~~~i~ 132 (354)
..++.+++|+++|++++|||.+++... .+..-..++++||+ +++-. .+ +++ .+|++...+|..+ ++
T Consensus 227 ~~~~i~~~L~~~g~~~~did~~~~h~~-----~~~~~~~~~~~lg~--~~~~~~~~~~~~Gn~~sas~~~~L~~~---~~ 296 (325)
T PRK12879 227 MPKGARQVLEKAGLTKDDIDWVIPHQA-----NLRIIESLCEKLGI--PMEKTLVSVEYYGNTSAATIPLALDLA---LE 296 (325)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECCC-----CHHHHHHHHHHcCC--CHHHhhhhHhhhCchHHHHHHHHHHHH---HH
Confidence 346788999999999999999998742 23445678999999 32211 12 233 3566666677544 55
Q ss_pred cCCC-CCCEEEEEee
Q 018515 133 SSSW-DGRYGLVVCT 146 (354)
Q Consensus 133 sg~~-~~~~vLVV~~ 146 (354)
.|.. +++++|+++.
T Consensus 297 ~g~~~~Gd~vll~~~ 311 (325)
T PRK12879 297 QGKIKPGDTLLLYGF 311 (325)
T ss_pred cCCCCCCCEEEEEEE
Confidence 5522 4578888774
No 152
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=88.77 E-value=1.2 Score=42.49 Aligned_cols=82 Identities=18% Similarity=0.140 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCC-e-eEEe-e-cCcChHHHHHHHHHHHH
Q 018515 55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTD-I-EGVD-S-TNACYGGTAALFNCVNW 130 (354)
Q Consensus 55 ~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~-~-~a~D-i-~~aC~g~~~aL~~A~~~ 130 (354)
.-..++.+++|+++|++++|||.+++... .+..-..+++.||+ +.+ . ..++ + |.+|++-+.+|..+
T Consensus 219 ~~~~~~~~~~l~~~g~~~~di~~~~~h~~-----~~~~~~~~~~~lgi--~~~k~~~~~~~~Gn~~sas~~~~L~~~--- 288 (318)
T TIGR00747 219 RKMGDVVEETLEANGLDPEDIDWFVPHQA-----NLRIIEALAKRLEL--DMSQVVKTVHKYGNTSAASIPLALDEL--- 288 (318)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCC-----CHHHHHHHHHHcCC--CHHHeeehHhhhCCHHHHHHHHHHHHH---
Confidence 34567889999999999999999997532 23456678999999 322 2 1221 2 34666767777654
Q ss_pred HHcCC-CCCCEEEEEee
Q 018515 131 VESSS-WDGRYGLVVCT 146 (354)
Q Consensus 131 i~sg~-~~~~~vLVV~~ 146 (354)
+++|. -+++++|+++.
T Consensus 289 ~~~~~~~~Gd~vll~~~ 305 (318)
T TIGR00747 289 LRTGRIKPGDLLLLVAF 305 (318)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 34431 14578888773
No 153
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=88.60 E-value=3.8 Score=34.07 Aligned_cols=78 Identities=15% Similarity=0.249 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCC-------eeEEeecCcChHHHHHHHHHHH
Q 018515 57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTD-------IEGVDSTNACYGGTAALFNCVN 129 (354)
Q Consensus 57 a~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~-------~~a~Di~~aC~g~~~aL~~A~~ 129 (354)
.+.|++++|+++|++++|||.+=+.- ..-.......+.||+ .+. ..++---.||+|...-+..+..
T Consensus 24 p~~A~~~al~~ag~~~~did~~Ei~E-----aFA~~~l~~~~~lg~--~~~~vN~~GG~la~GHP~gasG~r~~~~l~~~ 96 (123)
T PF02803_consen 24 PVPAARKALERAGLTPDDIDVIEINE-----AFAAQVLAFLEALGL--DPEKVNPNGGALALGHPLGASGARLVVELAHQ 96 (123)
T ss_dssp HHHHHHHHHHHHT--GGGESEEEE-------SBHHHHHHHHHHHTT--GGGGBSTT--HHHH-BHTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCccccchhhccc-----hhhhHHHHhhccccc--cccccCcccccccccccccccccchhhhhHHH
Confidence 45899999999999999999987652 123455667788888 221 1111111378888888887777
Q ss_pred HHHcCCCCCCEEEEE
Q 018515 130 WVESSSWDGRYGLVV 144 (354)
Q Consensus 130 ~i~sg~~~~~~vLVV 144 (354)
+-+.+ +++.|.-
T Consensus 97 L~~~~---~~~gla~ 108 (123)
T PF02803_consen 97 LRRRG---GRYGLAA 108 (123)
T ss_dssp HHHHT---TSEEEEE
T ss_pred HHHhc---hhhhhHH
Confidence 76654 2555543
No 154
>PRK06840 hypothetical protein; Validated
Probab=88.04 E-value=2.2 Score=41.19 Aligned_cols=81 Identities=17% Similarity=0.154 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCC-CeeEE-ee-cCcChHHHHHHHHHHHHHH
Q 018515 56 MSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNT-DIEGV-DS-TNACYGGTAALFNCVNWVE 132 (354)
Q Consensus 56 La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~-~~~a~-Di-~~aC~g~~~aL~~A~~~i~ 132 (354)
...++.+++|+++|++++|||.+++... .+.+-..++++||+ ++ ....+ ++ |.+|++....|..+ ++
T Consensus 238 ~~~~~i~~~L~~~gl~~~did~~~~h~~-----~~~~~~~~~~~Lgl--~~~~~~~~~~~Gn~~sas~~~~L~~~---~~ 307 (339)
T PRK06840 238 NFLKVIREALRKSGYTPKDIDYLAILHM-----KRSAHIALLEGLGL--TEEQAIYLDEYGHLGQLDQILSLHLA---LE 307 (339)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEECCc-----CHHHHHHHHHHcCC--CHHHeEeHHhccchhhhhHHHHHHHH---HH
Confidence 3458899999999999999999886532 13334568899999 42 22222 34 34666666666544 45
Q ss_pred cCCC-CCCEEEEEee
Q 018515 133 SSSW-DGRYGLVVCT 146 (354)
Q Consensus 133 sg~~-~~~~vLVV~~ 146 (354)
+|.. ++.++|+++.
T Consensus 308 ~~~~~~Gd~ill~~~ 322 (339)
T PRK06840 308 QGKLKDGDLVVLVSA 322 (339)
T ss_pred cCCCCCCCEEEEEEE
Confidence 5421 4577888773
No 155
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=87.79 E-value=2.2 Score=42.37 Aligned_cols=114 Identities=12% Similarity=0.054 Sum_probs=66.9
Q ss_pred cccHHHHHHhhCCCcc-hhhhcccceeEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHH
Q 018515 18 CVQQEALEAHDGASKG-KYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFL 96 (354)
Q Consensus 18 ~v~~~el~~~~g~~~~-~i~~~~Gi~~r~~~~~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v 96 (354)
+++++|.++.++.++- ||. +.+. .... + ++.....+.|+++||+++|++++|||++-+- +. .......-
T Consensus 252 vl~See~A~~l~~~pv~~I~-g~~~--~~~~-~-~~~~~~~~~A~~~al~~Agl~~~DiDv~Ei~----da-Fa~~~l~~ 321 (388)
T PRK06366 252 VMASEKAINEYGLKPIARIT-GYES--ASLD-P-LDFVEAPIPATRKLLEKQNKSIDYYDLVEHN----EA-FSIASIIV 321 (388)
T ss_pred EEecHHHHHHcCCCcCEEEE-EEEE--EecC-H-HHhcccHHHHHHHHHHHcCCCHHHcceeecc----ch-hHHHHHHH
Confidence 5667777766665443 442 2222 2221 1 1122234789999999999999999998654 22 33455566
Q ss_pred HHHhcCCCCC-C----eeEEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEE
Q 018515 97 MQIFEKFGNT-D----IEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVV 144 (354)
Q Consensus 97 ~~~LGl~g~~-~----~~a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV 144 (354)
.+.||++|.+ | ..++---.||+|...-+..+.++-+.| +++.|+.
T Consensus 322 le~lgl~g~~vN~~GG~la~GHP~GatG~~~~~~l~~qL~~~~---~~~g~~~ 371 (388)
T PRK06366 322 RDQLKIDNERFNVNGGAVAIGHPIGNSGSRIIVTLINALKTRH---MKTGLAT 371 (388)
T ss_pred HHHhCCCCCccCCCCchhhhCCCcCCCHHHHHHHHHHHHHhcC---CCeEEEE
Confidence 7788884321 1 111211237888887788777776544 2555544
No 156
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=87.77 E-value=1.3 Score=42.64 Aligned_cols=83 Identities=13% Similarity=0.087 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeE--E-ee-cCcChHHHHHHHHHHH
Q 018515 54 ISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEG--V-DS-TNACYGGTAALFNCVN 129 (354)
Q Consensus 54 ~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a--~-Di-~~aC~g~~~aL~~A~~ 129 (354)
.+...++.+++|+++|++++|||.+++...+ +.+-..+.++||+ ++.-.. + +. |.++++...+|..+
T Consensus 226 ~~~~~~~~~~~L~~~gl~~~did~~~~h~~~-----~~~~~~~~~~l~l--~~~k~~~~l~~~Gn~~sas~~~~L~~~-- 296 (326)
T PRK05963 226 VRMMSGASQNVLASAAMTPQDIDRFFPHQAN-----ARIVDKVCETIGI--PRAKAASTLETYGNSSAATIPLSLSLA-- 296 (326)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEeCCCC-----HHHHHHHHHHcCC--CHHHhhhhHHhhCcHHHHHHHHHHHHH--
Confidence 3445578889999999999999999885322 3455677899999 333211 1 22 34666666666544
Q ss_pred HHHcCCC-CCCEEEEEee
Q 018515 130 WVESSSW-DGRYGLVVCT 146 (354)
Q Consensus 130 ~i~sg~~-~~~~vLVV~~ 146 (354)
++.+.. +++++|+++.
T Consensus 297 -~~~~~~~~Gd~vll~~~ 313 (326)
T PRK05963 297 -NLEQPLREGERLLFAAA 313 (326)
T ss_pred -HHhCCCCCCCEEEEEEE
Confidence 334321 4578888874
No 157
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=87.29 E-value=1.9 Score=42.95 Aligned_cols=81 Identities=14% Similarity=0.228 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCC-CCCee----EEeecCcChHHHHHHHHHHHH
Q 018515 56 MSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFG-NTDIE----GVDSTNACYGGTAALFNCVNW 130 (354)
Q Consensus 56 La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g-~~~~~----a~Di~~aC~g~~~aL~~A~~~ 130 (354)
-...|+++||+++|++++|||++-+. +..+.......+.||+.. +.+.. ++---.|++|...-+..+.++
T Consensus 290 ~~~~a~~~al~~agl~~~did~~ei~-----d~f~~~~l~~~e~lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~el~~qL 364 (391)
T PRK07661 290 GPIAAIPKALKLAGLELSDIGLFELN-----EAFASQSIQVIRELGLDEEKVNVNGGAIALGHPLGCTGAKLTLSLIHEM 364 (391)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEeC-----CHHHHHHHHHHHHcCCCCCCCCCCCChHHhCCcHHHHHHHHHHHHHHHH
Confidence 44689999999999999999999833 222333444456788721 11111 111112566665566666665
Q ss_pred HHcCCCCCCEEEEE
Q 018515 131 VESSSWDGRYGLVV 144 (354)
Q Consensus 131 i~sg~~~~~~vLVV 144 (354)
-+.| +++.|+.
T Consensus 365 ~~~~---~~~g~~~ 375 (391)
T PRK07661 365 KRRN---EQFGIVT 375 (391)
T ss_pred HhcC---CCeEEEE
Confidence 5544 2555543
No 158
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=87.04 E-value=3.6 Score=39.25 Aligned_cols=77 Identities=12% Similarity=-0.085 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEE----eec-CcChHHHHHHHHHHH
Q 018515 55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGV----DST-NACYGGTAALFNCVN 129 (354)
Q Consensus 55 ~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~----Di~-~aC~g~~~aL~~A~~ 129 (354)
..-.++++++|+++|+.++|||.+++..........-.........+. ...... .++ .++++.+..|..+..
T Consensus 205 ~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~---~~~~~~~~~~~~G~~~aas~~~~l~~~~~ 281 (332)
T cd00825 205 EGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGD---KSPAVSATKAMTGNLSSAAVVLAVDEAVL 281 (332)
T ss_pred HHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCC---CCceeECCCcccccchhHhHHHHHHHHHH
Confidence 455589999999999999999999976543322211122222233332 112211 343 477777888887777
Q ss_pred HHHcC
Q 018515 130 WVESS 134 (354)
Q Consensus 130 ~i~sg 134 (354)
.++.+
T Consensus 282 ~~~~~ 286 (332)
T cd00825 282 MLEHG 286 (332)
T ss_pred HHhcC
Confidence 66655
No 159
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=87.04 E-value=3.6 Score=40.80 Aligned_cols=42 Identities=10% Similarity=0.127 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcC
Q 018515 56 MSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK 102 (354)
Q Consensus 56 La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl 102 (354)
-...|+++|++++|++|+|||.+-+. +..+.......+.||+
T Consensus 286 ~~~~a~~~a~~~Agi~~~did~~e~~-----d~f~~~~~~~~e~lg~ 327 (386)
T cd00751 286 GPVPAIPKALKRAGLTLDDIDLIEIN-----EAFAAQALACLKELGL 327 (386)
T ss_pred hHHHHHHHHHHHcCCCHHHcCEEEee-----chhHHHHHHHHHHhCC
Confidence 34689999999999999999998753 1122334455677887
No 160
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=86.96 E-value=2.2 Score=34.84 Aligned_cols=39 Identities=15% Similarity=0.116 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHhhchhCCCCCccccceecccCCchHHHHHHHHHh
Q 018515 216 ALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARL 261 (354)
Q Consensus 216 ~~~~~i~~~l~~~g~~~~~~l~~~Did~~v~HQan~~ii~~~~~~l 261 (354)
...+++++.|++++ ++++|||++..|- ++.......+..
T Consensus 26 ~~~~~i~~al~~ag------i~~~~I~~i~~hg-~Gt~~~D~~E~~ 64 (119)
T PF02801_consen 26 ALARAIRRALADAG------ISPEDIDYIEAHG-TGTPLGDAAEAE 64 (119)
T ss_dssp HHHHHHHHHHHHHT------S-GGGEEEEE-----SSHHHHHHHHH
T ss_pred HHHHHHHHHHhhhc------cccccceeeeeec-cccccchhhhhh
Confidence 44677889999999 9999999999995 444444443433
No 161
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=86.66 E-value=3.2 Score=42.74 Aligned_cols=120 Identities=15% Similarity=0.014 Sum_probs=63.9
Q ss_pred cccHHHHHHhhCCCc-chhh-hccccee--EeecC-CCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcH
Q 018515 18 CVQQEALEAHDGASK-GKYT-IGLGQEC--MAFCS-EVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSI 92 (354)
Q Consensus 18 ~v~~~el~~~~g~~~-~~i~-~~~Gi~~--r~~~~-~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~ 92 (354)
++++++.++.++.+. +|+. .+.+... ..+.. ++-..+.....|+++|++.+|++++|||++-+-++. |..
T Consensus 250 il~S~e~A~~l~~~~~~~V~i~g~a~~~~~~~~~~r~~~~~~~~~~~aa~~a~~~AGi~~~Did~~elydcF-----~~~ 324 (498)
T PRK08257 250 LLTSVAKARRLGVPEDRWVYLHGGADAHDPYDILERPDLHRSPAIRAAGRRALALAGLGIDDIDAFDLYSCF-----PSA 324 (498)
T ss_pred EEeeHHHHHhcCCCCCceEEEEEEEEeeCccccccccccccChHHHHHHHHHHHHhCCCHHHCCEEEeccCC-----HHH
Confidence 567777777776542 2321 2222211 11111 111223334579999999999999999999776442 344
Q ss_pred HHHHHHHhcCCCCCCeeEEeecC-----cChH---HHHHHHHHHHHHHcCCCCCCEEEEEe
Q 018515 93 KTFLMQIFEKFGNTDIEGVDSTN-----ACYG---GTAALFNCVNWVESSSWDGRYGLVVC 145 (354)
Q Consensus 93 a~~v~~~LGl~g~~~~~a~Di~~-----aC~g---~~~aL~~A~~~i~sg~~~~~~vLVV~ 145 (354)
.....+.||+.++... .+.++. |-.+ ++..+.-+...|+.. +.++.|+.+
T Consensus 325 ~~~~~E~LGl~~~g~~-pvN~sGGl~s~G~P~~a~g~~~i~E~v~QLRg~--~~~~gLv~~ 382 (498)
T PRK08257 325 VQVAARELGLDLDDPR-PLTVTGGLPFFGGPGNNYVTHAIAEMVERLRAN--PGRRGLVTA 382 (498)
T ss_pred HHHHHHHcCcCCCCCC-CcCCCcChhhcCCchhhHHHHHHHHHHHHHhhc--CCCEEEEEC
Confidence 4555688998321111 122222 2233 344444455555544 346666654
No 162
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=86.48 E-value=2.1 Score=42.13 Aligned_cols=82 Identities=11% Similarity=0.223 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHH-hcCCCCCC--eeEEe-e-cCcChHHHHHHHHHHH
Q 018515 55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQI-FEKFGNTD--IEGVD-S-TNACYGGTAALFNCVN 129 (354)
Q Consensus 55 ~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~-LGl~g~~~--~~a~D-i-~~aC~g~~~aL~~A~~ 129 (354)
....++.+++|+++|++++|||.+++.-.+. .+--.+.++ ||+.-++. ...++ . |.+|++...+|..+..
T Consensus 271 ~~~~~~i~~~L~~~gl~~~dId~~~~Hq~~~-----~~~d~~~~~llg~~~~~~~~~~~~~~~GNt~sasi~~~L~~~~~ 345 (372)
T PRK07515 271 PMVAEHIVEHLAENGLTPADVKRFWLHQANI-----NMNQLIGKKVLGRDATPEEAPVILDEYANTSSAGSIIAFHKHSD 345 (372)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCCCH-----HHHHHHHHHhccCCCChhhceEeHHhcCCchhhHHHHHHHHHhc
Confidence 3467899999999999999999999763221 122223445 66511111 11232 3 4688898888887754
Q ss_pred HHHcCCCCCCEEEEEe
Q 018515 130 WVESSSWDGRYGLVVC 145 (354)
Q Consensus 130 ~i~sg~~~~~~vLVV~ 145 (354)
-++ +++++|+++
T Consensus 346 ~~~----~Gd~vll~~ 357 (372)
T PRK07515 346 DLA----AGDLGVICS 357 (372)
T ss_pred cCC----CCCEEEEEE
Confidence 333 457788776
No 163
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=86.29 E-value=1.5 Score=43.78 Aligned_cols=40 Identities=13% Similarity=0.052 Sum_probs=33.2
Q ss_pred HHHHHHHHHHhhchhCCCCCccccceecccCCchHHHHHHHHHhhh
Q 018515 218 DTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLF 263 (354)
Q Consensus 218 ~~~i~~~l~~~g~~~~~~l~~~Did~~v~HQan~~ii~~~~~~l~~ 263 (354)
..+++++++++| ++++|||++-+|-+..-......+.+++
T Consensus 294 ~~a~~~al~~ag------l~~~dId~~e~~d~f~~~~~~~~e~lg~ 333 (393)
T PRK05656 294 VSATRRCLDKAG------WSLAELDLIEANEAFAAQSLAVGKELGW 333 (393)
T ss_pred HHHHHHHHHHcC------CCHHHCCEEEecCccHHHHHHHHHHhCC
Confidence 468889999999 9999999999998876666666777774
No 164
>PRK04262 hypothetical protein; Provisional
Probab=85.73 E-value=1.7 Score=42.35 Aligned_cols=81 Identities=14% Similarity=0.161 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCC-ee-E--E-ee-cCcChHHHHHHHHH
Q 018515 54 ISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTD-IE-G--V-DS-TNACYGGTAALFNC 127 (354)
Q Consensus 54 ~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~-~~-a--~-Di-~~aC~g~~~aL~~A 127 (354)
.....++.+++|+++|++++|||.+++...+ +.+-..++++||+ +++ +. . + ++ |.++++-..+|..+
T Consensus 208 ~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~n-----~~~~~~~~~~Lgl--~~ek~~~~~~~~~~GNt~sAsi~~~L~~~ 280 (347)
T PRK04262 208 FKHIISAAKGLMEKLGLKPSDYDYAVFHQPN-----GKFPLRVAKMLGF--TKEQVKPGLLTPYIGNTYSGSALLGLAAV 280 (347)
T ss_pred HHHHHHHHHHHHHHhCcCHHHhceeecCCCc-----hHHHHHHHHHcCC--CHHHhhccchhhhhCChHHHHHHHHHHHH
Confidence 3567788999999999999999999887221 2344567889999 322 22 1 2 34 45778888888766
Q ss_pred HHHHHcCCCCCCEEEEEe
Q 018515 128 VNWVESSSWDGRYGLVVC 145 (354)
Q Consensus 128 ~~~i~sg~~~~~~vLVV~ 145 (354)
..-++ ++.++|+++
T Consensus 281 ~~~~~----~Gd~vll~~ 294 (347)
T PRK04262 281 LDVAK----PGDRILVVS 294 (347)
T ss_pred HHhCC----CCCEEEEEe
Confidence 54222 457777765
No 165
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=84.60 E-value=3.3 Score=39.37 Aligned_cols=82 Identities=15% Similarity=0.131 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCee--EEe-ec-CcChHHHHHHHHHHHH
Q 018515 55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIE--GVD-ST-NACYGGTAALFNCVNW 130 (354)
Q Consensus 55 ~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~--a~D-i~-~aC~g~~~aL~~A~~~ 130 (354)
....++.+++|+++|++++|||.+++...+ +..-..+.++||+ +++-. .++ ++ .++++....|..+
T Consensus 223 ~~~~~~i~~~l~~~g~~~~di~~~~~h~~~-----~~~~~~~~~~lgl--~~~~~~~~~~~~Gn~~sas~~~~L~~~--- 292 (320)
T cd00830 223 RLMPESIEEALEKAGLTPDDIDWFVPHQAN-----LRIIEAVAKRLGL--PEEKVVVNLDRYGNTSAASIPLALDEA--- 292 (320)
T ss_pred HhhHHHHHHHHHHcCCCHHHCCEEEECCCC-----HHHHHHHHHHhCC--CHHHhhhhHHhhCcHHHHHHHHHHHHH---
Confidence 445688899999999999999999887432 3445668899999 32221 121 22 3555555566544
Q ss_pred HHcCCC-CCCEEEEEee
Q 018515 131 VESSSW-DGRYGLVVCT 146 (354)
Q Consensus 131 i~sg~~-~~~~vLVV~~ 146 (354)
++.|.. +++++|+++.
T Consensus 293 ~~~~~~~~G~~vll~~~ 309 (320)
T cd00830 293 IEEGKLKKGDLVLLLGF 309 (320)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 444421 4588888774
No 166
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=84.37 E-value=3.6 Score=41.12 Aligned_cols=76 Identities=9% Similarity=0.007 Sum_probs=44.0
Q ss_pred cccHHHHHHhhCCCcchhhhcccceeEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHH
Q 018515 18 CVQQEALEAHDGASKGKYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLM 97 (354)
Q Consensus 18 ~v~~~el~~~~g~~~~~i~~~~Gi~~r~~~~~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~ 97 (354)
++..++.++.++.++.+...+.+.... .+.... .-...|+++||+++|++|+|||++-+- +..+.......
T Consensus 265 vl~se~~A~~~~~~p~~~i~g~~~~~~---~~~~~~-~~~~~a~~~al~~Agl~~~Did~~ei~-----d~f~~~~l~~~ 335 (404)
T PRK06205 265 LVTTEDKAEELGLRPLARLVSWAVAGV---EPSRMG-IGPVPATEKALARAGLTLDDIDLIELN-----EAFAAQVLAVL 335 (404)
T ss_pred EEecHHHHHHCCCCceEEEEEEEEecc---CCcccc-ccHHHHHHHHHHHcCCCHHHCCEeeec-----cHHHHHHHHHH
Confidence 456666666666544222223333211 111111 234689999999999999999998743 11234445556
Q ss_pred HHhcC
Q 018515 98 QIFEK 102 (354)
Q Consensus 98 ~~LGl 102 (354)
+.||+
T Consensus 336 e~lg~ 340 (404)
T PRK06205 336 KEWGF 340 (404)
T ss_pred HHhCc
Confidence 77887
No 167
>PRK07937 lipid-transfer protein; Provisional
Probab=84.06 E-value=6 Score=38.90 Aligned_cols=76 Identities=8% Similarity=-0.071 Sum_probs=42.4
Q ss_pred cccHHHHHHhhCCCcchhhhcccce--eEeecCCCCCHHHHHHHHHHHHHHH-cCCCcCCccEEEEeeccCCCCCCcHHH
Q 018515 18 CVQQEALEAHDGASKGKYTIGLGQE--CMAFCSEVEDVISMSLTAVTNLLEK-YKIDPKQIGRLEVGSETVIDKSKSIKT 94 (354)
Q Consensus 18 ~v~~~el~~~~g~~~~~i~~~~Gi~--~r~~~~~~e~~~~La~~Aa~~aL~~-agi~~~dId~lI~aT~t~~~~~p~~a~ 94 (354)
+++.++.++.++.++-||. +.+.. ...+...+.... .++++++++ +|++|+|||.+=+- +..+....
T Consensus 212 vl~s~~~A~~l~~~pv~I~-g~~~~~~~~~~~~~d~~~~----~~~~~a~~~aAgi~~~diD~~Ei~-----D~F~~~~l 281 (352)
T PRK07937 212 VLAAGDRARELRERPAWIT-GIEHRIESPSLGARDLTRS----PSTALAAEAATGGDAGGVDVAELH-----APFTHQEL 281 (352)
T ss_pred EEecHHHHHHcCCCcEEEE-EEEEeeCCccccccccccH----HHHHHHHHHhcCCCHHHCCEEEEe-----CCChHHHH
Confidence 5677777777765555543 22221 111211222222 333444444 69999999998654 22345556
Q ss_pred HHHHHhcCC
Q 018515 95 FLMQIFEKF 103 (354)
Q Consensus 95 ~v~~~LGl~ 103 (354)
...+.||+.
T Consensus 282 ~~~e~lGl~ 290 (352)
T PRK07937 282 ILREALGLG 290 (352)
T ss_pred HHHHHcCCC
Confidence 677889983
No 168
>PRK09051 beta-ketothiolase; Provisional
Probab=83.46 E-value=3.1 Score=41.47 Aligned_cols=41 Identities=10% Similarity=0.122 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcC
Q 018515 57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK 102 (354)
Q Consensus 57 a~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl 102 (354)
...|+++||+++|++|+|||++-+. +..+.......+.||+
T Consensus 294 ~~~a~~~al~~agi~~~did~~ei~-----d~f~~~~~~~~e~lg~ 334 (394)
T PRK09051 294 PVPATQKALERAGLTVADLDVIEAN-----EAFAAQACAVTRELGL 334 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEec-----CccHHHHHHHHHHhCC
Confidence 3689999999999999999999763 2233445566788998
No 169
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=82.99 E-value=4.6 Score=40.40 Aligned_cols=41 Identities=12% Similarity=0.164 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcC
Q 018515 57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK 102 (354)
Q Consensus 57 a~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl 102 (354)
...|+++||+++|++++|||++-+. +..+.......+.||+
T Consensus 299 ~~~a~~~al~~Agl~~~DId~~ei~-----D~f~~~~l~~~e~lg~ 339 (401)
T PRK09050 299 PAPATRKLLARLGLTIDQFDVIELN-----EAFAAQGLAVLRQLGL 339 (401)
T ss_pred HHHHHHHHHHHcCCCHHHCCccccC-----cHhHHHHHHHHHHcCC
Confidence 4689999999999999999998732 2233445556678887
No 170
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=82.93 E-value=3.5 Score=40.83 Aligned_cols=41 Identities=7% Similarity=0.087 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHhhchhCCCCCccccceecccCCchHHHHHHHHHhhh
Q 018515 217 LDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLF 263 (354)
Q Consensus 217 ~~~~i~~~l~~~g~~~~~~l~~~Did~~v~HQan~~ii~~~~~~l~~ 263 (354)
...+++.+++++| ++++|||++-+|-++..+....++.||+
T Consensus 259 ~~~a~~~al~~Ag------i~~~DiD~~ei~d~ft~~~l~~le~lGl 299 (385)
T PRK12578 259 TQLAARQAYNMAK------VTPNDIEVATVHDAFTIAEIMGYEDLGF 299 (385)
T ss_pred HHHHHHHHHHHcC------CCHHHCCEEEecCcChHHHHHHHHHcCC
Confidence 3467889999999 9999999999999999888888999986
No 171
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=82.10 E-value=4.4 Score=40.21 Aligned_cols=43 Identities=7% Similarity=-0.062 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcC
Q 018515 55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK 102 (354)
Q Consensus 55 ~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl 102 (354)
.-...|+++|++++|++|+|||++-+--. .+.......+.||+
T Consensus 260 ~~~~~a~~~a~~~agl~~~did~~e~~d~-----f~~~~~~~~e~lg~ 302 (389)
T PRK07516 260 EGPRRAWQRALAQAGVTLDDLSFVETHDC-----FTIAELIEYEAMGL 302 (389)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecC-----CCHHHHHHHHHcCC
Confidence 44558999999999999999999865521 23445566778887
No 172
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=81.76 E-value=1.6 Score=35.70 Aligned_cols=77 Identities=16% Similarity=0.189 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHcCCCcCCccEEE-EeeccCCCCCCcHHHHHHHHhcCCC-CCCeeEEee----c-CcChHHHHHHHHHHH
Q 018515 57 SLTAVTNLLEKYKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFEKFG-NTDIEGVDS----T-NACYGGTAALFNCVN 129 (354)
Q Consensus 57 a~~Aa~~aL~~agi~~~dId~lI-~aT~t~~~~~p~~a~~v~~~LGl~g-~~~~~a~Di----~-~aC~g~~~aL~~A~~ 129 (354)
-.++.+++|+++|++|+|||+|. .+|.|+.. -+.-+..+.+.++-.. ...++.--+ + ...++++.+|..+..
T Consensus 27 ~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~-D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~Gh~~~asG~~~l~~~~l 105 (119)
T PF02801_consen 27 LARAIRRALADAGISPEDIDYIEAHGTGTPLG-DAAEAEAIARVFGDSARQQPVPVGSVKSNIGHTEAASGLLSLAKALL 105 (119)
T ss_dssp HHHHHHHHHHHHTS-GGGEEEEE----SSHHH-HHHHHHHHHHHHGGGGGTSTSEEE-THHHH-B-GGGHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhccccccceeeeeeccccccc-hhhhhhhhhhhhcccccccccceeccccccccccccchHHHHHHHHH
Confidence 36889999999999999999998 45444321 2334455666666411 012433322 2 255666667777777
Q ss_pred HHHcC
Q 018515 130 WVESS 134 (354)
Q Consensus 130 ~i~sg 134 (354)
.++.+
T Consensus 106 ~l~~~ 110 (119)
T PF02801_consen 106 ALEHG 110 (119)
T ss_dssp HHHHT
T ss_pred HHhcC
Confidence 77766
No 173
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=81.49 E-value=6.9 Score=35.65 Aligned_cols=30 Identities=20% Similarity=0.124 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCccEEEEee
Q 018515 53 VISMSLTAVTNLLEKYKIDPKQIGRLEVGS 82 (354)
Q Consensus 53 ~~~La~~Aa~~aL~~agi~~~dId~lI~aT 82 (354)
......++.+++|+++|++++|||.++...
T Consensus 143 ~~~~~~~~i~~~l~~ag~~~~did~~~~h~ 172 (254)
T cd00327 143 SGEGLARAARKALEGAGLTPSDIDYVEAHG 172 (254)
T ss_pred ChHHHHHHHHHHHHHcCCCHHHCCEEEccC
Confidence 345677899999999999999999988654
No 174
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=81.00 E-value=6 Score=37.69 Aligned_cols=81 Identities=15% Similarity=0.007 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeE--E-eec-CcChHHHHHHHHHHHHH
Q 018515 56 MSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEG--V-DST-NACYGGTAALFNCVNWV 131 (354)
Q Consensus 56 La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a--~-Di~-~aC~g~~~aL~~A~~~i 131 (354)
...++.+++|+++|++++|||.+++... .+..-..+.+.||+ +++-.. + +++ .+|+.-+..|. .++
T Consensus 220 ~~~~~i~~~l~~~g~~~~di~~~~~h~~-----~~~~~~~~~~~lg~--~~~~~~~~~~~~Gn~~~a~~~~~L~---~~~ 289 (319)
T PRK09352 220 ELAKVAREALEAAGLTPEDIDWLVPHQA-----NLRIIDATAKKLGL--PMEKVVVTVDKYGNTSAASIPLALD---EAV 289 (319)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEECCC-----CHHHHHHHHHHhCC--CHHHhhhhHHhhCCHHHHHHHHHHH---HHH
Confidence 3456889999999999999999997632 23445678889999 432111 1 232 35555556665 334
Q ss_pred HcCCC-CCCEEEEEee
Q 018515 132 ESSSW-DGRYGLVVCT 146 (354)
Q Consensus 132 ~sg~~-~~~~vLVV~~ 146 (354)
+.|.. +++++|+++.
T Consensus 290 ~~g~~~~Gd~vll~s~ 305 (319)
T PRK09352 290 RDGRIKRGDLVLLEGF 305 (319)
T ss_pred HcCCCCCCCEEEEEEE
Confidence 44421 4578888774
No 175
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=80.79 E-value=5 Score=40.00 Aligned_cols=45 Identities=18% Similarity=0.174 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcC
Q 018515 53 VISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK 102 (354)
Q Consensus 53 ~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl 102 (354)
.......|+++|++++|++|+|||++=+-- . .+.......+.||+
T Consensus 286 ~~~~~~~a~~~a~~~agl~~~Did~~Ei~d----~-Fa~~~l~~~e~lG~ 330 (390)
T PRK06504 286 MLEAPLPATERALKKAGMKIDDIDLYEVNE----A-FASVPLAWLKATGA 330 (390)
T ss_pred hhccHHHHHHHHHHHcCCCHHHCCEEEecc----c-chHHHHHHHHHhCC
Confidence 344556799999999999999999986542 2 23445566788998
No 176
>PLN02287 3-ketoacyl-CoA thiolase
Probab=80.78 E-value=3.2 Score=42.28 Aligned_cols=40 Identities=10% Similarity=0.156 Sum_probs=32.8
Q ss_pred HHHHHHHHHHhhchhCCCCCccccceecccCCchHHHHHHHHHhhh
Q 018515 218 DTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLF 263 (354)
Q Consensus 218 ~~~i~~~l~~~g~~~~~~l~~~Did~~v~HQan~~ii~~~~~~l~~ 263 (354)
..++++++++++ ++++|||++=+|-+..-......+.||+
T Consensus 334 ~~A~~~al~~Ag------l~~~DID~~Ei~daFa~~~l~~~e~lG~ 373 (452)
T PLN02287 334 AVAIPAAVKAAG------LELDDIDLFEINEAFASQFVYCCKKLGL 373 (452)
T ss_pred HHHHHHHHHHcC------CCHHHCCEEEecchHHHHHHHHHHHcCC
Confidence 478889999999 9999999999998776665556677775
No 177
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=80.56 E-value=5.9 Score=39.65 Aligned_cols=41 Identities=12% Similarity=0.175 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcC
Q 018515 57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK 102 (354)
Q Consensus 57 a~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl 102 (354)
...|+++||+++|++|+|||++-+. +..+.......+.||+
T Consensus 298 ~~~a~~~al~~Agl~~~DID~~ei~-----D~f~~~~l~~~e~lG~ 338 (400)
T TIGR02430 298 PVPATQKLLARAGLSIDQFDVIELN-----EAFAAQALAVLRELGL 338 (400)
T ss_pred HHHHHHHHHHHhCCCHHHCCCcccC-----cHHHHHHHHHHHHcCC
Confidence 3689999999999999999998722 2233445566778897
No 178
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=79.89 E-value=3.3 Score=41.98 Aligned_cols=79 Identities=13% Similarity=0.032 Sum_probs=47.6
Q ss_pred cccHHHHHHhhCCCc-----chhhhcccceeEee--cCCCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCC
Q 018515 18 CVQQEALEAHDGASK-----GKYTIGLGQECMAF--CSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSK 90 (354)
Q Consensus 18 ~v~~~el~~~~g~~~-----~~i~~~~Gi~~r~~--~~~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p 90 (354)
++.+++.++.++.++ -||. +.+...... ..++-+....+..|+++|++++|++++|||++-+--+ .+
T Consensus 266 vl~See~A~~l~~~p~~~~~v~i~-g~~~~~~~~~~~~~~~~~~~~~~~A~~~a~~~AGl~~~DiD~~Ei~da-----Fa 339 (438)
T PTZ00455 266 VLASEEGLQKMGLSPNDSRLVEIK-SLACASGNLYEDPPDATRMFTSRAAAQKALSMAGVKPSDLQVAEVHDC-----FT 339 (438)
T ss_pred EEecHHHHHhcCCCCCCCccEEEE-EEEEecCCcccCccccccchHHHHHHHHHHHHcCCCHHHCcEeeeccc-----Ch
Confidence 566777777776554 2232 222211100 1111133344578999999999999999999866522 33
Q ss_pred cHHHHHHHHhcC
Q 018515 91 SIKTFLMQIFEK 102 (354)
Q Consensus 91 ~~a~~v~~~LGl 102 (354)
.......+.||+
T Consensus 340 ~~~l~~~e~lGl 351 (438)
T PTZ00455 340 IAELLMYEALGI 351 (438)
T ss_pred HHHHHHHHHcCC
Confidence 455666778887
No 179
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=79.53 E-value=2.8 Score=41.80 Aligned_cols=78 Identities=9% Similarity=-0.069 Sum_probs=46.7
Q ss_pred cccHHHHHHhhCCCcchhhhcccceeE--eecCCCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHH
Q 018515 18 CVQQEALEAHDGASKGKYTIGLGQECM--AFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTF 95 (354)
Q Consensus 18 ~v~~~el~~~~g~~~~~i~~~~Gi~~r--~~~~~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~ 95 (354)
++++++.++.++.++-||. +.|...- ....++.. ......|+++|++++|++|+|||.+-+-.+ .+.....
T Consensus 218 vl~s~~~A~~l~~~~v~I~-g~~~~~~~~~~~~~~~~-~~~~~~aa~~a~~~AGi~~~did~~elyD~-----Fs~~~~~ 290 (388)
T PRK08142 218 VVVRPEIARSLKRPLVKVL-GAGEAIKGQMGGKVDLT-YSGAAWSGPAAFAEAGVTPADIKYASIYDS-----FTITVLM 290 (388)
T ss_pred EEecHHHHhhcCCCCEEEE-EEEEecCCccccCcccc-cHHHHHHHHHHHHHcCCCHHHCCEEEEecc-----chHHHHH
Confidence 5677777766654444443 2222111 11112222 334568999999999999999998755432 2344555
Q ss_pred HHHHhcC
Q 018515 96 LMQIFEK 102 (354)
Q Consensus 96 v~~~LGl 102 (354)
..+.||+
T Consensus 291 ~~E~lGl 297 (388)
T PRK08142 291 QLEDLGF 297 (388)
T ss_pred HHHHcCC
Confidence 5677887
No 180
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=79.50 E-value=3.7 Score=41.07 Aligned_cols=41 Identities=10% Similarity=0.028 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcC
Q 018515 57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK 102 (354)
Q Consensus 57 a~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl 102 (354)
...|+++||+++|++++|||++=. - +..+.....-.+.||+
T Consensus 305 ~~~a~~~al~~Agi~~~did~~ei----~-d~f~~~~l~~le~lg~ 345 (406)
T PRK07851 305 PVEASKQALARAGMSIDDIDLVEI----N-EAFAAQVLPSARELGI 345 (406)
T ss_pred HHHHHHHHHHHhCCCHHHCCeehh----h-hHHHHHHHHHHHHhCC
Confidence 468999999999999999999832 1 1123334444577887
No 181
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=78.40 E-value=6.3 Score=44.44 Aligned_cols=168 Identities=16% Similarity=0.211 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCccE-----EEEee--ccCCC--CCCc----------HHHHHHHHh----cCCCCCCee
Q 018515 53 VISMSLTAVTNLLEKYKIDPKQIGR-----LEVGS--ETVID--KSKS----------IKTFLMQIF----EKFGNTDIE 109 (354)
Q Consensus 53 ~~~La~~Aa~~aL~~agi~~~dId~-----lI~aT--~t~~~--~~p~----------~a~~v~~~L----Gl~g~~~~~ 109 (354)
...|-.+|--+|+-++||.|.++.. .+-+| .|... +.|. .-++.++++ .++| +
T Consensus 87 q~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDfqG----P 162 (2376)
T KOG1202|consen 87 QLRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDFQG----P 162 (2376)
T ss_pred HHHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEeccC----C
Confidence 4679999999999999999988653 33222 22111 1121 111233332 3322 2
Q ss_pred EEeecCcChHHHHHHHHHHHHHHcCCCCCCEEEEEeeccc-c------c------CC-CCC--------CCcccceeEEE
Q 018515 110 GVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSA-V------Y------AE-GPA--------RPTGGAAAVVM 167 (354)
Q Consensus 110 a~Di~~aC~g~~~aL~~A~~~i~sg~~~~~~vLVV~~e~~-~------~------~~-~~~--------~~~~GDGAaA~ 167 (354)
.|.+..+|++.+.+|+.|.+-+++|++ ..+||-++... + + .+ ++. .+-=.||.+|+
T Consensus 163 S~s~DtacsSsl~al~~a~~~~r~gqc--d~AiVaG~~liLkPt~slQFlRLgmls~dGsCkaFDeagnGY~Rseg~~av 240 (2376)
T KOG1202|consen 163 SFSVDTACSSSLMALQNAFQDIRSGQC--DAAIVAGANLILKPTTSLQFLRLGMLSPDGSCKAFDEAGNGYCRSEGVVAV 240 (2376)
T ss_pred chhhhhhhHHHHHHHHHHHHhhhccCC--chhhhcccceEeccchhhHHHHhcCcCCCCcccchhccCCceeecCceEEE
Confidence 344567999999999999999999976 89999887762 1 1 11 111 12237899999
Q ss_pred EeccCCC---c---eeeec--cccccccccccccccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHhhchhCCCCCcc
Q 018515 168 LVGPDAP---V---AFESK--LRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLS 239 (354)
Q Consensus 168 ll~~~~~---~---~~~~~--~~g~~~~~~~~~~~p~~~~~~~~~dg~~~~~~~~~~~~~~i~~~l~~~g~~~~~~l~~~ 239 (354)
++.+... . .++.+ ++|. +.. |-.+| +|. .-...+++..+.+| +.++
T Consensus 241 llqrk~~ArRvYAtilnartNTDGf---------KEq-GvTfP--~G~--------~Q~qLi~e~Yse~G------l~P~ 294 (2376)
T KOG1202|consen 241 LLQRKSLARRVYATILNARTNTDGF---------KEQ-GVTFP--SGD--------MQEQLIRETYSEAG------LNPE 294 (2376)
T ss_pred EEehhHHHHHHHHHhhccccCCCch---------hhc-CccCC--CcH--------HHHHHHHHHHHhcC------CCcc
Confidence 9986531 1 11211 2221 111 22233 332 11256677888888 9999
Q ss_pred ccceecccCCchH
Q 018515 240 NADYFVFHSPYNK 252 (354)
Q Consensus 240 Did~~v~HQan~~ 252 (354)
++-|+=-|--+.+
T Consensus 295 sv~YvEAHGtGTk 307 (2376)
T KOG1202|consen 295 SVVYVEAHGTGTK 307 (2376)
T ss_pred cEEEEEeccCCCC
Confidence 9999999965443
No 182
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=78.28 E-value=6.2 Score=32.80 Aligned_cols=40 Identities=8% Similarity=0.048 Sum_probs=32.3
Q ss_pred HHHHHHHHHHhhchhCCCCCccccceecccCCchHHHHHHHHHhhh
Q 018515 218 DTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLF 263 (354)
Q Consensus 218 ~~~i~~~l~~~g~~~~~~l~~~Did~~v~HQan~~ii~~~~~~l~~ 263 (354)
..++++++++++ ++++|||.|=.|-++.-......+.|++
T Consensus 25 ~~A~~~al~~ag------~~~~did~~Ei~EaFA~~~l~~~~~lg~ 64 (123)
T PF02803_consen 25 VPAARKALERAG------LTPDDIDVIEINEAFAAQVLAFLEALGL 64 (123)
T ss_dssp HHHHHHHHHHHT--------GGGESEEEE--SBHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhC------CCccccchhhccchhhhHHHHhhccccc
Confidence 367889999999 9999999999999999988888999986
No 183
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=77.99 E-value=3.3 Score=41.30 Aligned_cols=42 Identities=10% Similarity=0.044 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcC
Q 018515 56 MSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK 102 (354)
Q Consensus 56 La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl 102 (354)
....|+++|++++|++++|||.+-+-- . .+.......+.||+
T Consensus 277 ~~~~aa~~a~~~Agi~~~Didv~el~D----~-fa~~~l~~le~lGl 318 (403)
T PRK06289 277 HVRQAVLDAYRRAGVGLDDLDGFEVHD----C-FTPSEYLAIDHIGL 318 (403)
T ss_pred HHHHHHHHHHHHcCCCHHHCeEEeeec----c-chHHHHHHHHHcCC
Confidence 356899999999999999999987652 2 34556666788898
No 184
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=77.39 E-value=13 Score=36.73 Aligned_cols=70 Identities=11% Similarity=0.076 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEee---------cCcChHHHHHHHH
Q 018515 56 MSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDS---------TNACYGGTAALFN 126 (354)
Q Consensus 56 La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di---------~~aC~g~~~aL~~ 126 (354)
-...|++++|+++|++++|||.+... +..........+.||+ .+. .+.+ -.|++|.......
T Consensus 259 ~~~~a~~~al~~Agl~~~Did~~ei~-----eafa~~~~~~~e~lgl--~~~--~vn~~GG~la~Ghp~GatG~~~~~~~ 329 (361)
T PRK06690 259 GPIFAVNKLLNEMNMKVEDIDYFEIN-----EAFASKVVACAKELQI--PYE--KLNVNGGAIALGHPYGASGAMLVTRL 329 (361)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEeeec-----chhHHHHHHHHHhcCC--Cch--hcccCCcHHhccCchhhhHHHHHHHH
Confidence 46789999999999999999999663 2223445566778888 221 1112 2367777766666
Q ss_pred HHHHHHcC
Q 018515 127 CVNWVESS 134 (354)
Q Consensus 127 A~~~i~sg 134 (354)
..++-+.|
T Consensus 330 ~~ql~~~~ 337 (361)
T PRK06690 330 FYQAKRED 337 (361)
T ss_pred HHHHHHhC
Confidence 66665544
No 185
>PRK06158 thiolase; Provisional
Probab=76.30 E-value=4.1 Score=40.41 Aligned_cols=43 Identities=7% Similarity=0.052 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcC
Q 018515 55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK 102 (354)
Q Consensus 55 ~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl 102 (354)
.-...|+++|++++|++|+|||++=+--+ .+.......+.||+
T Consensus 254 ~~~~~aa~~A~~~AGi~p~DId~~ElyD~-----Fs~~~l~~~E~lG~ 296 (384)
T PRK06158 254 TAAAESGPRAFAMAGLTPADIDVVELYDA-----FTINTILFLEDLGF 296 (384)
T ss_pred hHHHHHHHHHHHHcCCCHHHCcEEEecCC-----chHHHHHHHHHcCC
Confidence 34568999999999999999999866532 23445555677887
No 186
>PRK07855 lipid-transfer protein; Provisional
Probab=75.76 E-value=4.4 Score=40.30 Aligned_cols=42 Identities=7% Similarity=-0.008 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcC
Q 018515 56 MSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK 102 (354)
Q Consensus 56 La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl 102 (354)
....|+++|++++|++++|||.+-+-- ..+.......+.||+
T Consensus 267 ~~~~aa~~a~~~AGi~~~DiDv~El~D-----~Ft~~~l~~~E~lG~ 308 (386)
T PRK07855 267 EMGLVARQLWAQSGLGPADIDTAILYD-----HFTPFVLMQLEELGF 308 (386)
T ss_pred hHHHHHHHHHHHcCCCHHHCcEEEecc-----CCcHHHHHHHHHcCC
Confidence 345799999999999999999985442 234455666677887
No 187
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=75.48 E-value=3.4 Score=40.16 Aligned_cols=84 Identities=15% Similarity=0.117 Sum_probs=53.5
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCe--eEEe-e-cCcChHHHHHHHHH
Q 018515 52 DVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDI--EGVD-S-TNACYGGTAALFNC 127 (354)
Q Consensus 52 ~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~--~a~D-i-~~aC~g~~~aL~~A 127 (354)
.+..+..++.+++|+++|++++|||.++..- .-..+=..++++||+ +.+- ..+| . |.+-++-..+|..+
T Consensus 220 ~av~~~~~~~~~~L~~~~l~~~dId~~vpHQ-----an~ri~~~i~~~l~~--~~~k~~~~~~~yGNtsaAsiplaL~~~ 292 (323)
T COG0332 220 FAVRAMPKAIEEVLEKAGLTPEDIDWFVPHQ-----ANLRIIEAIAKKLGI--PEEKVVVTVDKYGNTSAASIPLALDEA 292 (323)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEcccc-----ccHHHHHHHHHHcCC--CHHHHhhHHHHhcccccchHHHHHHHH
Confidence 4567888999999999999999999998652 113445678889998 4332 2333 2 34555555566655
Q ss_pred HHHHHcCCC-CCCEEEEEe
Q 018515 128 VNWVESSSW-DGRYGLVVC 145 (354)
Q Consensus 128 ~~~i~sg~~-~~~~vLVV~ 145 (354)
++.|.. ++.++|+++
T Consensus 293 ---~~~g~ik~Gd~ill~~ 308 (323)
T COG0332 293 ---LREGRIKPGDLVLLEA 308 (323)
T ss_pred ---hhhCCCCCCCEEEEEe
Confidence 344432 234566554
No 188
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=74.65 E-value=9.6 Score=37.73 Aligned_cols=42 Identities=17% Similarity=0.124 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcC
Q 018515 56 MSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK 102 (354)
Q Consensus 56 La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl 102 (354)
-...|+++||+++|++++|||++-.--+. +.......+.||+
T Consensus 259 ~~~~a~~~al~~aGi~~~did~~e~~d~f-----t~~~~~~~e~lgl 300 (389)
T PRK06064 259 AAVVAAEKAYKMAGIEPKDIDVAEVHDCF-----TIAEILAYEDLGF 300 (389)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEecCCC-----cHHHHHHHHHcCC
Confidence 34579999999999999999998654221 2244556677887
No 189
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=74.50 E-value=9.9 Score=37.19 Aligned_cols=78 Identities=14% Similarity=0.218 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHHcCCCcCCccEEE-EeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEee----cC--cChHHHHHHHH
Q 018515 54 ISMSLTAVTNLLEKYKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDS----TN--ACYGGTAALFN 126 (354)
Q Consensus 54 ~~La~~Aa~~aL~~agi~~~dId~lI-~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di----~~--aC~g~~~aL~~ 126 (354)
..-..+|.++||+++|++|+|||+|- ++|.|+.. -+.=...|.+.+|- .+.++..-+ ++ +.+|.+..+..
T Consensus 205 ~~~~~~ai~~AL~~Agl~p~dIdyIeaHgtgT~~~-D~~E~~Ai~~~fg~--~~~~~v~s~K~~~GH~~~AaG~~~~~~~ 281 (342)
T PRK14691 205 GDGAYRAMKIALRQAGITPEQVQHLNAHATSTPVG-DLGEINAIKHLFGE--SNALAITSTKSATGHLLGAAGGLETIFT 281 (342)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEecCCCCcCC-CHHHHHHHHHHhCC--CCCceEECCcccccCCcchhhHHHHHHH
Confidence 44567899999999999999999986 56666433 34445566677764 223333322 22 44555544444
Q ss_pred HHHHHHcCC
Q 018515 127 CVNWVESSS 135 (354)
Q Consensus 127 A~~~i~sg~ 135 (354)
+. .++.|.
T Consensus 282 ~l-~l~~~~ 289 (342)
T PRK14691 282 VL-ALRDQI 289 (342)
T ss_pred HH-HHhCCc
Confidence 33 456553
No 190
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=72.86 E-value=12 Score=37.22 Aligned_cols=42 Identities=12% Similarity=0.029 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcC
Q 018515 56 MSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK 102 (354)
Q Consensus 56 La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl 102 (354)
-...|+++||+++|++++|||++-+-- ..+.......+.||+
T Consensus 270 ~~~~A~~~al~~Agi~~~DID~~Ei~d-----~Fa~~~l~~~e~lgl 311 (393)
T cd00826 270 GPIEAARKALEKAGLGIGDLDLIEAHD-----AFAANACATNEALGL 311 (393)
T ss_pred eHHHHHHHHHHHcCCCHHHcCeeehhh-----hhHHHHHHHHHHhCC
Confidence 357999999999999999999886552 134456666778887
No 191
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=72.61 E-value=6.6 Score=39.01 Aligned_cols=79 Identities=11% Similarity=0.058 Sum_probs=47.1
Q ss_pred cccHHHHHHhhCCCc-chhhhccccee--EeecCCCCCHHHHHHHHHHHHHHHcCCC--cCCccEEEEeeccCCCCCCcH
Q 018515 18 CVQQEALEAHDGASK-GKYTIGLGQEC--MAFCSEVEDVISMSLTAVTNLLEKYKID--PKQIGRLEVGSETVIDKSKSI 92 (354)
Q Consensus 18 ~v~~~el~~~~g~~~-~~i~~~~Gi~~--r~~~~~~e~~~~La~~Aa~~aL~~agi~--~~dId~lI~aT~t~~~~~p~~ 92 (354)
+++++|.++.++..+ .|| .+.|... ..+...+.........|+++|++++|++ ++|||++=+-.+ .+..
T Consensus 216 vl~s~e~a~~l~~~~~~~I-~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~p~~Did~~el~d~-----F~~~ 289 (386)
T PRK08313 216 VIGDEEAADAAAGRPVAWI-HGTAMRTEPLAFAGRDQVNPQAGRDAAAALWKAAGITDPRDEIDVAEIYVP-----FSWF 289 (386)
T ss_pred EEecHHHHHhcCCCCCeEE-EEEEEEecCcccccccccccHHHHHHHHHHHHHcCCCCChhhCCEEEeccC-----ChHH
Confidence 567777776665433 355 2333221 1111112222345668999999999997 699998755422 3344
Q ss_pred HHHHHHHhcC
Q 018515 93 KTFLMQIFEK 102 (354)
Q Consensus 93 a~~v~~~LGl 102 (354)
.....+.||+
T Consensus 290 ~~~~~e~lGl 299 (386)
T PRK08313 290 EPMWLENLGF 299 (386)
T ss_pred HHHHHHHcCC
Confidence 5556678887
No 192
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=72.33 E-value=21 Score=35.41 Aligned_cols=41 Identities=10% Similarity=0.052 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcC
Q 018515 57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK 102 (354)
Q Consensus 57 a~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl 102 (354)
...|++++|+++|++|+|||++=+- +. .........+.||+
T Consensus 282 ~~~a~~~al~~AGi~p~DId~~Ei~----da-Fa~~~l~~~e~lg~ 322 (385)
T TIGR02445 282 PVPATQKALKRAGLSISDIDVFELN----EA-FAAQALPCLKDLGL 322 (385)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEEc----cc-cHHHHHHHHHHcCC
Confidence 4689999999999999999988663 22 33445556678886
No 193
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=72.11 E-value=15 Score=36.85 Aligned_cols=46 Identities=13% Similarity=0.128 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHcCCCcCCccEEE-EeeccCCCCCCcHHHHHHHHhcC
Q 018515 56 MSLTAVTNLLEKYKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFEK 102 (354)
Q Consensus 56 La~~Aa~~aL~~agi~~~dId~lI-~aT~t~~~~~p~~a~~v~~~LGl 102 (354)
-..+|.++||+++|++|+|||+|- ++|.|+.. -+.=...|+..+|-
T Consensus 287 ~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~-D~~E~~Al~~~fg~ 333 (418)
T PRK07910 287 RAGHAMTRAIELAGLTPGDIDHVNAHATGTSVG-DVAEGKAINNALGG 333 (418)
T ss_pred HHHHHHHHHHHHhCCCHHHCCEEEcCCcCCCCC-CHHHHHHHHHHhCC
Confidence 467899999999999999999996 66665432 24445566777774
No 194
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=71.98 E-value=3.2 Score=40.64 Aligned_cols=58 Identities=14% Similarity=0.204 Sum_probs=39.2
Q ss_pred eEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCccEEE-EeeccCCCCCCcHHHHHHHHhcC
Q 018515 43 CMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFEK 102 (354)
Q Consensus 43 ~r~~~~~~e~~~~La~~Aa~~aL~~agi~~~dId~lI-~aT~t~~~~~p~~a~~v~~~LGl 102 (354)
-.|+..|+.+- .=|+.|.++||+++|+.|+|||+|= ++|+|+.-- -.-+..|.+.++-
T Consensus 290 a~HiT~P~~dG-~Ga~~am~raL~~Agl~pe~i~YvNAHATST~~GD-~aE~~Ai~~vf~~ 348 (440)
T KOG1394|consen 290 AYHITSPDPDG-AGAVLAMERALKDAGLSPEDIDYVNAHATSTPLGD-AAEAEAIKRVFGE 348 (440)
T ss_pred ccccCCCCCCc-chHHHHHHHHHHHcCCChhhcCeeecccccCcCch-HHHHHHHHHHhcc
Confidence 34555554443 2567789999999999999999995 888876432 1234455666654
No 195
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=71.35 E-value=6.5 Score=39.16 Aligned_cols=79 Identities=10% Similarity=0.001 Sum_probs=46.3
Q ss_pred cccHHHHHHhhCCCcchhhhccccee--EeecCCCCCHHHHHHHHHHHHHHHcCCC--cCCccEEEEeeccCCCCCCcHH
Q 018515 18 CVQQEALEAHDGASKGKYTIGLGQEC--MAFCSEVEDVISMSLTAVTNLLEKYKID--PKQIGRLEVGSETVIDKSKSIK 93 (354)
Q Consensus 18 ~v~~~el~~~~g~~~~~i~~~~Gi~~--r~~~~~~e~~~~La~~Aa~~aL~~agi~--~~dId~lI~aT~t~~~~~p~~a 93 (354)
+++.++.++.++.++-||. +.|... ......+-........|+++|++++|++ ++|||.+-+- +. .....
T Consensus 218 vl~s~~~a~~l~~~pv~I~-g~g~~~~~~~~~~~~~~~~~~~~~Aa~~a~~~AGi~~p~~DiD~~ei~----D~-Ft~~~ 291 (385)
T PRK06066 218 VLASEEVAKKLTDDPVWIK-GIGWSTESSNLETAELGKANYMRIAADMAYKMAGIESPRKEVDAAEVD----DR-YSYKE 291 (385)
T ss_pred EEeCHHHHHhcCCCCEEEE-EEEEecCCcccccccccccHHHHHHHHHHHHHcCCCCCHHHCcEEEEe----cC-ChHHH
Confidence 5667777766655444442 233221 1111111122222347999999999997 6999998665 22 33455
Q ss_pred HHHHHHhcC
Q 018515 94 TFLMQIFEK 102 (354)
Q Consensus 94 ~~v~~~LGl 102 (354)
....+.||+
T Consensus 292 l~~~e~lG~ 300 (385)
T PRK06066 292 LQHIEALRL 300 (385)
T ss_pred HHHHHHcCC
Confidence 666677887
No 196
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=70.93 E-value=9.5 Score=37.39 Aligned_cols=77 Identities=12% Similarity=0.097 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCC-CeeE--Ee-e-cCcChHHHHHHHHHHHH
Q 018515 56 MSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNT-DIEG--VD-S-TNACYGGTAALFNCVNW 130 (354)
Q Consensus 56 La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~-~~~a--~D-i-~~aC~g~~~aL~~A~~~ 130 (354)
......+++|+++|++++|||.+++.-.+ +.+--.+.++||+ ++ .+.. ++ . |.+.++...+|..+
T Consensus 243 ~~~~~i~~~L~~~gl~~~did~~v~HQ~~-----~~i~~~i~~~Lgl--~~ek~~~~~l~~~GNtssasip~~L~~~--- 312 (353)
T PRK12880 243 CEPKSFKEILEFSKVDEKDIAFHLFHQSN-----AYLVDCIKEELKL--NDDKVPNFIMEKYANLSACSLPALLCEL--- 312 (353)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEECCCC-----HHHHHHHHHHhCC--CHHHhhhhhHHhhCCHHHHHHHHHHHHH---
Confidence 34468889999999999999999987322 3445678899999 33 2321 23 3 45677777777644
Q ss_pred HHcCCCCCCEEEEEe
Q 018515 131 VESSSWDGRYGLVVC 145 (354)
Q Consensus 131 i~sg~~~~~~vLVV~ 145 (354)
+..+.. ++|+++
T Consensus 313 ~~~~~~---~~ll~~ 324 (353)
T PRK12880 313 DTPKEF---KASLSA 324 (353)
T ss_pred HHcCCc---EEEEEE
Confidence 566632 355554
No 197
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=69.73 E-value=23 Score=35.13 Aligned_cols=41 Identities=10% Similarity=0.079 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcC
Q 018515 57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK 102 (354)
Q Consensus 57 a~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl 102 (354)
...|+++||+++|++|+|||++=+-- ..+.......+.||+
T Consensus 284 ~~~a~~~al~~Agl~~~DId~~El~d-----~F~~~~l~~~e~lg~ 324 (387)
T PRK08947 284 PVPATQKALKRAGLSISDIDVFELNE-----AFAAQSLPCLKDLGL 324 (387)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecc-----cchHHHHHHHHHcCC
Confidence 46889999999999999999996542 233445556677887
No 198
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=69.59 E-value=9.3 Score=38.09 Aligned_cols=79 Identities=11% Similarity=-0.034 Sum_probs=46.5
Q ss_pred cccHHHHHHhhCCCcchhhhcccce--eEeecCCCCCHHHHHHHHHHHHHHHcCCCc--CCccEEEEeeccCCCCCCcHH
Q 018515 18 CVQQEALEAHDGASKGKYTIGLGQE--CMAFCSEVEDVISMSLTAVTNLLEKYKIDP--KQIGRLEVGSETVIDKSKSIK 93 (354)
Q Consensus 18 ~v~~~el~~~~g~~~~~i~~~~Gi~--~r~~~~~~e~~~~La~~Aa~~aL~~agi~~--~dId~lI~aT~t~~~~~p~~a 93 (354)
.++++|.++.++.++-||. +.|.. ..++...+.........|+++|++++|+++ +|||.+-+--+ .+.+.
T Consensus 224 vl~s~e~A~~l~~~~v~I~-g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~aGi~~p~~diD~~ei~D~-----Fs~~~ 297 (392)
T PRK06065 224 VLASEDLARRYTDTPVWVE-GVGWTLDNTEWPNRDLAYPRYVEFAARMAYKMAGIERPRKEIDVAEPYDP-----FDYKE 297 (392)
T ss_pred EEeCHHHHHhcCCCCEEEE-EEEEecCccccccccccccHHHHHHHHHHHHHcCCCCchhhCcEEEecCC-----ChHHH
Confidence 5677777777766665543 23321 111111111222233579999999999985 99999865422 23445
Q ss_pred HHHHHHhcC
Q 018515 94 TFLMQIFEK 102 (354)
Q Consensus 94 ~~v~~~LGl 102 (354)
....+.||+
T Consensus 298 l~~~E~lG~ 306 (392)
T PRK06065 298 LHHLEGLQL 306 (392)
T ss_pred HHHHHHcCC
Confidence 555567775
No 199
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=69.45 E-value=11 Score=36.75 Aligned_cols=80 Identities=10% Similarity=0.060 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHc--CCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCC-ee----EE-ee-cCcChHHHHHHHH
Q 018515 56 MSLTAVTNLLEKY--KIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTD-IE----GV-DS-TNACYGGTAALFN 126 (354)
Q Consensus 56 La~~Aa~~aL~~a--gi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~-~~----a~-Di-~~aC~g~~~aL~~ 126 (354)
...++++++|+++ |++++|||.+++...+ +.+-..++++||+ ++. +. .+ +. |.++++...+|..
T Consensus 260 ~~~~~i~~~L~~~~~g~~~~did~~~~H~~~-----~~i~~~v~~~lgl--~~~~~~~s~~~l~~~GN~~sasi~~~L~~ 332 (361)
T cd00831 260 NLERVLRKLLARLGIGLFKLAFDHWCVHPGG-----RAVLDAVEKALGL--SPEDLEASRMVLRRYGNMSSSSVLYVLAY 332 (361)
T ss_pred HHHHHHHHHhccccCCCccccceEEEECCCC-----hHHHHHHHHHcCC--CHHHHHHHHHHHHHhCCchhccHHHHHHH
Confidence 4556788999999 9999999999987532 2334567889999 322 21 22 34 4577888888876
Q ss_pred HHHHHHcCCC-CCCEEEEEe
Q 018515 127 CVNWVESSSW-DGRYGLVVC 145 (354)
Q Consensus 127 A~~~i~sg~~-~~~~vLVV~ 145 (354)
+. +.|.. +++++|+++
T Consensus 333 ~~---~~g~~~~Gd~vll~~ 349 (361)
T cd00831 333 ME---AKGRVKRGDRGLLIA 349 (361)
T ss_pred HH---HhCCCCCCCEEEEEE
Confidence 64 33421 457888876
No 200
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=67.83 E-value=20 Score=35.73 Aligned_cols=79 Identities=11% Similarity=-0.028 Sum_probs=46.4
Q ss_pred cccHHHHHHhhCC-CcchhhhcccceeEe-e--cCCCCCH--HHHHHHHHHHHHHHcCCC--cCCccEEEEeeccCCCCC
Q 018515 18 CVQQEALEAHDGA-SKGKYTIGLGQECMA-F--CSEVEDV--ISMSLTAVTNLLEKYKID--PKQIGRLEVGSETVIDKS 89 (354)
Q Consensus 18 ~v~~~el~~~~g~-~~~~i~~~~Gi~~r~-~--~~~~e~~--~~La~~Aa~~aL~~agi~--~~dId~lI~aT~t~~~~~ 89 (354)
++++++.++.++. ++-||. +.|...-. + ..++.+. ......|+++|++++|++ ++|||.+-+- +. .
T Consensus 224 vl~s~~~A~~l~~~~~v~I~-g~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGl~~~~~Did~~Ei~----D~-F 297 (398)
T PRK06157 224 IVTTPEIARALGKKDPVYVK-ALQLAVSNGWELQYNGWDGSYFPTTRIAARKAYREAGITDPREELSMAEVH----DC-F 297 (398)
T ss_pred EEecHHHHHhhCCCCCeEEE-EEEEecccccccccccccccccHHHHHHHHHHHHHcCCCCchhcCCEEEEe----cC-C
Confidence 5677777777765 455553 22222100 0 0011121 223567999999999997 7999998554 22 3
Q ss_pred CcHHHHHHHHhcC
Q 018515 90 KSIKTFLMQIFEK 102 (354)
Q Consensus 90 p~~a~~v~~~LGl 102 (354)
........+.||+
T Consensus 298 s~~~l~~~e~lGl 310 (398)
T PRK06157 298 SITELVTMEDLGL 310 (398)
T ss_pred hHHHHHHHHHcCC
Confidence 3456666778888
No 201
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=67.17 E-value=9.4 Score=37.36 Aligned_cols=44 Identities=11% Similarity=0.040 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcC
Q 018515 54 ISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK 102 (354)
Q Consensus 54 ~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl 102 (354)
..-...|+++||+++|++++|||++-+-.+ .+.......+.||+
T Consensus 250 ~~~~~~a~~~al~~Agl~~~did~~ei~d~-----F~~~~l~~~e~lGl 293 (375)
T cd00829 250 LDAARLAARRAYKMAGITPDDIDVAELYDC-----FTIAELLALEDLGF 293 (375)
T ss_pred cHHHHHHHHHHHHHcCCCHHHCCEEEecCc-----ChHHHHHHHHHcCC
Confidence 344568999999999999999999866532 23455666778887
No 202
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=66.79 E-value=4.2 Score=41.08 Aligned_cols=64 Identities=14% Similarity=0.070 Sum_probs=38.3
Q ss_pred cccHHHHHHhhCCCcc-hhhhcccceeEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEee
Q 018515 18 CVQQEALEAHDGASKG-KYTIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGS 82 (354)
Q Consensus 18 ~v~~~el~~~~g~~~~-~i~~~~Gi~~r~~~~~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT 82 (354)
++++++.++.++.++- |+....+.....+.. ..+.......|+++|++++|++++|||.+-+--
T Consensus 272 vl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~~-~~~~~~~~~~a~~~a~~~AGl~~~Did~~Ei~d 336 (427)
T PRK09268 272 LLASEEWAAEHGLPVLAYLVDAETAAVDFVHG-KEGLLMAPAYAVPRLLARNGLTLQDFDFYEIHE 336 (427)
T ss_pred EEecHHHHHHcCCCceEEEEEEEEEcCCcccc-cchhhccHHHHHHHHHHHcCCCHHHCCEEEecc
Confidence 5677777777766553 221221111111111 112233556799999999999999999997663
No 203
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=65.48 E-value=16 Score=35.94 Aligned_cols=80 Identities=10% Similarity=0.148 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHcCCCcCCccEEE-EeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEe----ec-CcChHHHHHHHHHH
Q 018515 55 SMSLTAVTNLLEKYKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVD----ST-NACYGGTAALFNCV 128 (354)
Q Consensus 55 ~La~~Aa~~aL~~agi~~~dId~lI-~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~D----i~-~aC~g~~~aL~~A~ 128 (354)
.-..++++++|+++|++++|||+|. .+|.|+.. -+.-+..+...++.. ...++..- ++ ..+++++.+|..+.
T Consensus 275 ~~~~~~i~~al~~agi~~~dId~v~~h~tgt~~~-d~~E~~al~~~~~~~-~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~ 352 (406)
T cd00834 275 EGAARAMRAALADAGLSPEDIDYINAHGTSTPLN-DAAESKAIKRVFGEH-AKKVPVSSTKSMTGHLLGAAGAVEAIATL 352 (406)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEecccccCccc-cHHHHHHHHHHhccc-CCCCceeCcchhhccchhhhhHHHHHHHH
Confidence 4456799999999999999999997 45544322 222233445555431 01222211 22 25666777777777
Q ss_pred HHHHcCCC
Q 018515 129 NWVESSSW 136 (354)
Q Consensus 129 ~~i~sg~~ 136 (354)
..++.|..
T Consensus 353 ~~l~~~~i 360 (406)
T cd00834 353 LALRDGVL 360 (406)
T ss_pred HHHhcCCc
Confidence 77887754
No 204
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=65.02 E-value=19 Score=35.82 Aligned_cols=78 Identities=8% Similarity=0.014 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHHcCCCcCCccEEE-EeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEe----ecC-cChHHHHHHHHH
Q 018515 54 ISMSLTAVTNLLEKYKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVD----STN-ACYGGTAALFNC 127 (354)
Q Consensus 54 ~~La~~Aa~~aL~~agi~~~dId~lI-~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~D----i~~-aC~g~~~aL~~A 127 (354)
..-..+|.++||+++|++|++||+|. .+|.|+.. -+.-..-|.+.+|- ..++.-. +++ .+++++..+..+
T Consensus 269 ~~~~~~a~~~al~~ag~~~~~i~~v~~hgtgt~~~-D~~E~~al~~~fg~---~~~pv~s~K~~~Gh~~~aaG~~~l~~~ 344 (399)
T cd00832 269 PPGLARAIRLALADAGLTPEDVDVVFADAAGVPEL-DRAEAAALAAVFGP---RGVPVTAPKTMTGRLYAGGAPLDVATA 344 (399)
T ss_pred HHHHHHHHHHHHHHcCCCHHHccEEEeccCcCCCC-CHHHHHHHHHHhCC---CCCceeCCCchhcchHHHHHHHHHHHH
Confidence 34456899999999999999999987 55555433 23434456666764 2222221 221 344444455555
Q ss_pred HHHHHcCC
Q 018515 128 VNWVESSS 135 (354)
Q Consensus 128 ~~~i~sg~ 135 (354)
...++.+.
T Consensus 345 ~l~l~~~~ 352 (399)
T cd00832 345 LLALRDGV 352 (399)
T ss_pred HHHHhCCC
Confidence 56677664
No 205
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=64.61 E-value=20 Score=35.43 Aligned_cols=79 Identities=11% Similarity=0.138 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHcCCCcCCccEEE-EeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEee----c-CcChHHHHHHHHHH
Q 018515 55 SMSLTAVTNLLEKYKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDS----T-NACYGGTAALFNCV 128 (354)
Q Consensus 55 ~La~~Aa~~aL~~agi~~~dId~lI-~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di----~-~aC~g~~~aL~~A~ 128 (354)
.-..+|.++||+++|++|+|||+|. .+|.|+.. -+.-...+...+|-.+ ..++...+ + ...++++..|..+.
T Consensus 274 ~~~~~a~~~Al~~Agi~~~dId~i~~hgtgt~~~-D~~E~~ai~~~~~~~~-~~~~v~s~K~~~Gh~~~Asg~~~l~~~~ 351 (407)
T cd00828 274 KGIARAIRTALAKAGLSLDDLDVISAHGTSTPAN-DVAESRAIAEVAGALG-APLPVTAQKALFGHSKGAAGALQLIGAL 351 (407)
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEecccccCccc-cHHHHHHHHHHHhccC-CCceeecccchhccchhhhhHHHHHHHH
Confidence 4567899999999999999999997 55555432 2333444455555311 12333322 1 23333444444455
Q ss_pred HHHHcCC
Q 018515 129 NWVESSS 135 (354)
Q Consensus 129 ~~i~sg~ 135 (354)
..++.+.
T Consensus 352 ~~l~~~~ 358 (407)
T cd00828 352 QSLEHGL 358 (407)
T ss_pred HHHhcCc
Confidence 5566653
No 206
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=63.55 E-value=19 Score=34.24 Aligned_cols=87 Identities=11% Similarity=0.017 Sum_probs=55.7
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCee-----EEe-e-cCcChHHHHHH
Q 018515 52 DVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIE-----GVD-S-TNACYGGTAAL 124 (354)
Q Consensus 52 ~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~-----a~D-i-~~aC~g~~~aL 124 (354)
.......++++++|++.|++ +|||+++....+. +..-..+.++|++.. ..+. .++ + |.+|++....|
T Consensus 220 ~~~~~~~~~~~~~l~~~~~~-~~i~~~~~h~~~~----~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~Gn~~sa~~~~~L 293 (324)
T cd00827 220 AAHKLIAKVVRKALDRAGLS-EDIDYFVPHQPNG----KKILEAVAKKLGGPP-EKASQTRWILLRRVGNMYAASILLGL 293 (324)
T ss_pred HHhHHHHHHHHHHHHHcccc-cccceeeccCchH----HHHHHHHHHHccchH-hhhccchhhHHHHhCchHHHHHHHHH
Confidence 34556778899999999999 9999888764332 145667788898711 1222 132 3 34777777777
Q ss_pred HHHHHHHHcCCC-CCCEEEEEeec
Q 018515 125 FNCVNWVESSSW-DGRYGLVVCTD 147 (354)
Q Consensus 125 ~~A~~~i~sg~~-~~~~vLVV~~e 147 (354)
..+ ++.+.. +++++|+++.-
T Consensus 294 ~~~---~~~~~~~~Gd~vl~~~~G 314 (324)
T cd00827 294 ASL---LESGKLKAGDRVLLFSYG 314 (324)
T ss_pred HHH---HhcCCCCCCCEEEEEEec
Confidence 755 344421 35788888754
No 207
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=63.48 E-value=20 Score=37.47 Aligned_cols=75 Identities=12% Similarity=0.155 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHcCCCcCCccEEE-EeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEe----ec--CcChHHHHHHHHHHH
Q 018515 57 SLTAVTNLLEKYKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVD----ST--NACYGGTAALFNCVN 129 (354)
Q Consensus 57 a~~Aa~~aL~~agi~~~dId~lI-~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~D----i~--~aC~g~~~aL~~A~~ 129 (354)
..+|.++||+++|++|+|||+|- ++|.|+.. -+.=...|.+.+|- .+.++..- ++ .+++|.+..+. +..
T Consensus 407 ~~~am~~AL~~AGl~p~dIdyInaHGTGT~~g-D~~E~~Ai~~~Fg~--~~~~pV~S~Ks~iGH~~gAAGa~eli~-~~l 482 (540)
T PLN02787 407 VILCIEKALAQSGVSKEDVNYINAHATSTKAG-DLKEYQALMRCFGQ--NPELRVNSTKSMIGHLLGAAGAVEAIA-TVQ 482 (540)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEccCccCCCC-CHHHHHHHHHHhCC--CCCceeeCCCCCcCCCcccchHHHHHH-HHH
Confidence 45889999999999999999986 66666533 22333455666664 22333222 22 35555554444 445
Q ss_pred HHHcCC
Q 018515 130 WVESSS 135 (354)
Q Consensus 130 ~i~sg~ 135 (354)
.|+.|.
T Consensus 483 al~~g~ 488 (540)
T PLN02787 483 AIRTGW 488 (540)
T ss_pred HHhcCC
Confidence 566664
No 208
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=62.67 E-value=28 Score=35.08 Aligned_cols=46 Identities=17% Similarity=0.310 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHcCCCcCCccEEE-EeeccCCCCCCcHHHHHHHHhcC
Q 018515 56 MSLTAVTNLLEKYKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFEK 102 (354)
Q Consensus 56 La~~Aa~~aL~~agi~~~dId~lI-~aT~t~~~~~p~~a~~v~~~LGl 102 (354)
=+.+|.+.||+++|++|+|||+|- ++|.|+.. -+.=+..|...+|-
T Consensus 277 Ga~~am~~AL~~Agl~~~~idYinaHgTsT~~n-D~~E~~ai~~vfg~ 323 (412)
T COG0304 277 GAIRAMRAALADAGLTPEDIDYINAHGTSTPAN-DKAESLAIKRVFGE 323 (412)
T ss_pred hHHHHHHHHHHHcCCCHhHCCEEeCCCccCCCc-cHHHHHHHHHHhcc
Confidence 355899999999999999999998 67777543 33434455555663
No 209
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=62.48 E-value=6.7 Score=39.57 Aligned_cols=28 Identities=11% Similarity=0.043 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHcCCCcCCccEEEEee
Q 018515 55 SMSLTAVTNLLEKYKIDPKQIGRLEVGS 82 (354)
Q Consensus 55 ~La~~Aa~~aL~~agi~~~dId~lI~aT 82 (354)
.-...|+++||+++|++++|||++-+--
T Consensus 309 ~~~~~a~~~al~~AGl~~~DiD~~Ei~d 336 (428)
T PRK08963 309 LGPAYATPLALERAGLTLADLTLIDMHE 336 (428)
T ss_pred hHHHHHHHHHHHHcCCCHHHCCEEEEcc
Confidence 3456799999999999999999987653
No 210
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=62.30 E-value=21 Score=35.37 Aligned_cols=77 Identities=13% Similarity=0.179 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHcCCCcCCccEEE-EeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEe--ec-CcChHHHHHHHHHHHHHH
Q 018515 57 SLTAVTNLLEKYKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVD--ST-NACYGGTAALFNCVNWVE 132 (354)
Q Consensus 57 a~~Aa~~aL~~agi~~~dId~lI-~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~D--i~-~aC~g~~~aL~~A~~~i~ 132 (354)
..+|.++||+++|++|+|||++. ++|.|+.. -+.=...|.+.+|- +..+-+.- ++ ..+++++..+..+...++
T Consensus 262 ~~~a~~~Al~~Agl~~~dId~v~~hgtgt~~~-D~~E~~al~~~f~~--~~pv~s~K~~~Gh~~~AaG~~~l~~~~~~l~ 338 (392)
T PRK09185 262 AILAMQQALADAGLAPADIGYINLHGTATPLN-DAMESRAVAAVFGD--GVPCSSTKGLTGHTLGAAGAVEAAICWLALR 338 (392)
T ss_pred HHHHHHHHHHHcCCCHHHccEEEeCCCCCcCC-CHHHHHHHHHHhCC--CCceeCCCcccccChhhcchHHHHHHHHHHh
Confidence 35899999999999999999986 55555432 22323445555553 11111111 22 234444445555555667
Q ss_pred cCCC
Q 018515 133 SSSW 136 (354)
Q Consensus 133 sg~~ 136 (354)
.|..
T Consensus 339 ~~~i 342 (392)
T PRK09185 339 HGLP 342 (392)
T ss_pred cCCC
Confidence 6643
No 211
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=60.74 E-value=25 Score=35.31 Aligned_cols=78 Identities=15% Similarity=0.146 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHcCCCcCCccEEE-EeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEee----cC-cChHHHHHHHHHHHH
Q 018515 57 SLTAVTNLLEKYKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDS----TN-ACYGGTAALFNCVNW 130 (354)
Q Consensus 57 a~~Aa~~aL~~agi~~~dId~lI-~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di----~~-aC~g~~~aL~~A~~~ 130 (354)
..+|.++||+++|++|+|||+|. ++|.|+. ..+.-..-|...+|-. ..+++.--+ ++ ..++++..+..+...
T Consensus 291 ~~~ai~~AL~~agi~p~dId~i~~Hgtgt~~-~d~~E~~al~~~~~~~-~~~~pv~s~k~~~Gh~~~AsG~~~~~~~~l~ 368 (425)
T PRK06501 291 AIGAIRAALADAGLTPEQIDYINAHGTSTPE-NDKMEYLGLSAVFGER-LASIPVSSNKSMIGHTLTAAGAVEAVFSLLT 368 (425)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecCccCcc-hHHHHHHHHHHHhccc-CCCcEEECCCcccCCCchhhhHHHHHHHHHH
Confidence 55889999999999999999997 4555442 2233333455555531 123332222 21 233334444445555
Q ss_pred HHcCCC
Q 018515 131 VESSSW 136 (354)
Q Consensus 131 i~sg~~ 136 (354)
++.|..
T Consensus 369 l~~~~i 374 (425)
T PRK06501 369 IQTGRL 374 (425)
T ss_pred HhcCcC
Confidence 676644
No 212
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=60.26 E-value=16 Score=36.04 Aligned_cols=45 Identities=18% Similarity=0.357 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHcCCCcCCccEEE-EeeccCCCCCCcHHHHHHHHhcC
Q 018515 57 SLTAVTNLLEKYKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFEK 102 (354)
Q Consensus 57 a~~Aa~~aL~~agi~~~dId~lI-~aT~t~~~~~p~~a~~v~~~LGl 102 (354)
..+|+++||+++|++++|||++. ++|.|+.. -+.-...+...+|-
T Consensus 277 ~~~ai~~Al~~Agi~~~dId~ve~h~tgt~~~-D~~E~~a~~~~~~~ 322 (407)
T TIGR03150 277 AARAMRAALKDAGINPEDVDYINAHGTSTPLG-DKAETKAIKRVFGD 322 (407)
T ss_pred HHHHHHHHHHHcCCCHhHCCEEeCcCCCCCCC-CHHHHHHHHHHhcc
Confidence 56899999999999999999996 55555322 23334455666664
No 213
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=60.13 E-value=7.9 Score=38.65 Aligned_cols=74 Identities=9% Similarity=0.035 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCC-C--CC--eeEEeecCcChHHHHHHHHHHHH
Q 018515 56 MSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFG-N--TD--IEGVDSTNACYGGTAALFNCVNW 130 (354)
Q Consensus 56 La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g-~--~~--~~a~Di~~aC~g~~~aL~~A~~~ 130 (354)
....|+++||+++|++|+|||++-+. +. .......-.+.||++. + ++ ..++---.|++|....+..+.++
T Consensus 291 ~~~~a~~~Al~~AGl~p~DID~~ei~----da-fa~~~l~~~~~l~~~~~~vN~sGg~~a~GHplgAtG~~~~~~~~~qL 365 (392)
T PRK06633 291 APVPASQKALSKAGWSVNDLEVIEVN----EA-FAAQSIYVNREMKWDMEKVNINGGAIAIGHPIGASGGRVLITLIHGL 365 (392)
T ss_pred HHHHHHHHHHHHcCCCHHHcCeeehh----hH-HHHHHHHHHhhhCCCccccCCCCchHhhCCcHHHHHHHHHHHHHHHH
Confidence 44789999999999999999998732 11 1111112234455410 0 00 01111113666766777777666
Q ss_pred HHcC
Q 018515 131 VESS 134 (354)
Q Consensus 131 i~sg 134 (354)
-+.|
T Consensus 366 ~~~~ 369 (392)
T PRK06633 366 RRAK 369 (392)
T ss_pred HhcC
Confidence 5544
No 214
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=60.08 E-value=14 Score=36.58 Aligned_cols=87 Identities=9% Similarity=-0.036 Sum_probs=56.5
Q ss_pred CCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCC---CCCeeEE-eec-CcChHHHHHHH
Q 018515 51 EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFG---NTDIEGV-DST-NACYGGTAALF 125 (354)
Q Consensus 51 e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g---~~~~~a~-Di~-~aC~g~~~aL~ 125 (354)
+.-..-...|++..+++.|..++|.|.+++.+ |... ....++..||.+. .+..... -|+ ..|.+...+|.
T Consensus 205 ~~Y~~~~~~a~~~~~~k~gls~~dfdy~vfH~--P~~k---~~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~La 279 (377)
T COG3425 205 PAYFKHVENAAKGYMEKTGLSPDDFDYIVFHQ--PNGK---FPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGLA 279 (377)
T ss_pred HHHHHHHHHHHHHHHHHhCCChhhhCeEEecC--CCCc---hHHHHHHHhCccHhhcCccchhhhhcCcccchhHHHHHH
Confidence 34456778999999999999999999999985 3333 3444555666511 1444444 364 57777776665
Q ss_pred HHHHHHHcCCCCCCEEEEEe
Q 018515 126 NCVNWVESSSWDGRYGLVVC 145 (354)
Q Consensus 126 ~A~~~i~sg~~~~~~vLVV~ 145 (354)
..-.-.. . +++|+|+++
T Consensus 280 s~L~~a~--~-~G~rIl~~S 296 (377)
T COG3425 280 SLLDNAK--L-PGDRILLFS 296 (377)
T ss_pred HHHhhcC--C-CCCEEEEEe
Confidence 4433333 1 458888875
No 215
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=59.94 E-value=33 Score=34.42 Aligned_cols=80 Identities=11% Similarity=0.062 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHcCCCcCCccEEE-EeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeec----C-cChHHHHHHHHHHH
Q 018515 56 MSLTAVTNLLEKYKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST----N-ACYGGTAALFNCVN 129 (354)
Q Consensus 56 La~~Aa~~aL~~agi~~~dId~lI-~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~----~-aC~g~~~aL~~A~~ 129 (354)
...+|.+++|+++|++|+|||+|- ++|.|+.. -+.=+.-|.+.+|-.+.+.++.--+. + -.++++..+..+..
T Consensus 279 ~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~-D~~E~~al~~~fg~~~~~~~~v~s~K~~~GH~~~AaG~~~~~~~~l 357 (414)
T PRK08722 279 GGALAMEAAMRDAGVTGEQIGYVNAHGTSTPAG-DVAEIKGIKRALGEAGSKQVLVSSTKSMTGHLLGAAGSVEAIITVM 357 (414)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEccCccCCCC-CHHHHHHHHHHhcccCCCCceeeCcccccccchHHHHHHHHHHHHH
Confidence 457889999999999999999995 66666433 23434556666663111234333222 1 22333334444445
Q ss_pred HHHcCCC
Q 018515 130 WVESSSW 136 (354)
Q Consensus 130 ~i~sg~~ 136 (354)
.++.|..
T Consensus 358 ~l~~~~i 364 (414)
T PRK08722 358 SLVDQIV 364 (414)
T ss_pred HHhcCcc
Confidence 6676643
No 216
>PRK09604 UGMP family protein; Validated
Probab=59.11 E-value=31 Score=33.51 Aligned_cols=30 Identities=10% Similarity=0.194 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHcCCCcCCccEEEEeec
Q 018515 54 ISMSLTAVTNLLEKYKIDPKQIGRLEVGSE 83 (354)
Q Consensus 54 ~~La~~Aa~~aL~~agi~~~dId~lI~aT~ 83 (354)
++......+++|+++|++++|||.|.+...
T Consensus 52 ~~~l~~~i~~~L~~~~~~~~did~iavt~G 81 (332)
T PRK09604 52 VENIVPLIEEALKEAGLTLEDIDAIAVTAG 81 (332)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecC
Confidence 556778899999999999999999998853
No 217
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=58.70 E-value=32 Score=34.41 Aligned_cols=45 Identities=9% Similarity=-0.115 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHcCCCcCCccEEE-EeeccCCCCCCcHHHHHHHHhcC
Q 018515 56 MSLTAVTNLLEKYKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFEK 102 (354)
Q Consensus 56 La~~Aa~~aL~~agi~~~dId~lI-~aT~t~~~~~p~~a~~v~~~LGl 102 (354)
-..++.++||+++|+ ++|||+|. ++|.|+.. -..=...|.+.++.
T Consensus 281 ~~~~am~~AL~~Agl-~~~IdyI~ahgtgT~~~-D~~E~~Ai~~~f~~ 326 (398)
T PRK06519 281 DLEASLERLLKPAGG-LAAPTAVISGATGAHPA-TAEEKAALEAALAG 326 (398)
T ss_pred HHHHHHHHHHHHCCC-cccCCEEEeCCCCCCCc-cHHHHHHHHHHcCC
Confidence 446899999999999 89999987 56666432 22223445555564
No 218
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=58.58 E-value=19 Score=35.79 Aligned_cols=78 Identities=14% Similarity=0.173 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHcCCCcCCccEEE-EeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEe----ecC-cChHHHHHHHHHHHH
Q 018515 57 SLTAVTNLLEKYKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVD----STN-ACYGGTAALFNCVNW 130 (354)
Q Consensus 57 a~~Aa~~aL~~agi~~~dId~lI-~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~D----i~~-aC~g~~~aL~~A~~~ 130 (354)
..+|+++||+++|++++|||+|- ++|.|+.. -+.-..-++..+|.. ..+++.-- +++ -+++++..+..+...
T Consensus 278 ~~~a~~~Al~~agi~~~dId~v~~hgtgt~~~-d~~E~~al~~~~~~~-~~~~~v~s~k~~~Gh~~~AsG~~~~i~~~l~ 355 (411)
T PRK07314 278 AARAMKLALKDAGINPEDIDYINAHGTSTPAG-DKAETQAIKRVFGEH-AYKVAVSSTKSMTGHLLGAAGAVEAIFSVLA 355 (411)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEccccCCccc-cHHHHHHHHHHhccc-CCCCeeECccchhchhHHHHHHHHHHHHHHH
Confidence 45899999999999999999996 56655332 233333456666631 12232221 222 334444455555566
Q ss_pred HHcCCC
Q 018515 131 VESSSW 136 (354)
Q Consensus 131 i~sg~~ 136 (354)
++.|..
T Consensus 356 l~~~~i 361 (411)
T PRK07314 356 IRDQVI 361 (411)
T ss_pred HhCCCc
Confidence 676643
No 219
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=56.94 E-value=8.4 Score=38.55 Aligned_cols=42 Identities=10% Similarity=0.048 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcC
Q 018515 56 MSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK 102 (354)
Q Consensus 56 La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl 102 (354)
-.+.|+++||+++|++++|||++-+.- . .........+.||+
T Consensus 297 ~~~~a~~~a~~~agl~~~did~~ei~d----~-Fa~~~l~~~e~lg~ 338 (401)
T PRK08131 297 GPVEAIKKALARAGLTLDDMDIIEINE----A-FASQVLGCLKGLGV 338 (401)
T ss_pred hHHHHHHHHHHHcCCCHHHCCeehhcc----H-HHHHHHHHHHHcCC
Confidence 456899999999999999999987431 1 11223334567887
No 220
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=56.82 E-value=27 Score=34.87 Aligned_cols=77 Identities=14% Similarity=0.214 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHcCCCcCCccEEE-EeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEe----ecC--cChHHHHHHHHH
Q 018515 55 SMSLTAVTNLLEKYKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVD----STN--ACYGGTAALFNC 127 (354)
Q Consensus 55 ~La~~Aa~~aL~~agi~~~dId~lI-~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~D----i~~--aC~g~~~aL~~A 127 (354)
.-..+|+++||+++|++|+|||+|- ++|.|+.. -+.=...++..+|- ...+..-- +++ +++|.+..+. +
T Consensus 288 ~~~~~a~~~Al~~Agi~p~dId~i~~hgtgt~~~-D~~E~~al~~~fg~--~~~~~v~s~K~~~GH~~gAaG~~~~~~-~ 363 (424)
T PRK06333 288 EGARRAMLIALRQAGIPPEEVQHLNAHATSTPVG-DLGEVAAIKKVFGH--VSGLAVSSTKSATGHLLGAAGGVEAIF-T 363 (424)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEeccCCCCccc-hHHHHHHHHHHhCC--CCCceeECcccchhhhHHHHHHHHHHH-H
Confidence 3456899999999999999999996 66655432 22333455666662 12232211 222 4455554444 4
Q ss_pred HHHHHcCC
Q 018515 128 VNWVESSS 135 (354)
Q Consensus 128 ~~~i~sg~ 135 (354)
...++.|.
T Consensus 364 ~l~l~~g~ 371 (424)
T PRK06333 364 ILALRDQI 371 (424)
T ss_pred HHHHhcCC
Confidence 45666663
No 221
>PRK08256 lipid-transfer protein; Provisional
Probab=56.13 E-value=26 Score=34.69 Aligned_cols=42 Identities=7% Similarity=0.059 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHhhchhCCCCCccccceecccCCchHHHHHHHHHhhhh
Q 018515 217 LDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFN 264 (354)
Q Consensus 217 ~~~~i~~~l~~~g~~~~~~l~~~Did~~v~HQan~~ii~~~~~~l~~~ 264 (354)
...++++++++++ ++++|||.+-+|.++.-.....++.||+.
T Consensus 266 ~~~a~~~a~~~ag------~~~~DiD~~ei~d~f~~~~l~~le~lg~~ 307 (391)
T PRK08256 266 TRAAAQQVYEQAG------IGPEDIDVVELHDCFSANELLTYEALGLC 307 (391)
T ss_pred HHHHHHHHHHHcC------CCHHHCCEEeeccCCcHHHHHHHHHcCCC
Confidence 3468889999999 99999999999999999888899999973
No 222
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=55.78 E-value=13 Score=35.93 Aligned_cols=39 Identities=15% Similarity=0.241 Sum_probs=34.8
Q ss_pred HHHHHHHHHhhchhCCCCCccccceecccCCchHHHHHHHHHhhh
Q 018515 219 TCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLF 263 (354)
Q Consensus 219 ~~i~~~l~~~g~~~~~~l~~~Did~~v~HQan~~ii~~~~~~l~~ 263 (354)
-++..+|+++| +..+|||+|=+..+..-......+.|++
T Consensus 298 laipk~lk~aG------~~~sdVd~~EiNEAFs~v~lA~iK~Lgl 336 (396)
T KOG1390|consen 298 LAIPKALKKAG------LEQSDVDYWEINEAFSVVVLANIKKLGL 336 (396)
T ss_pred HHHHHHHHHcC------cchhhhhHHhhhhhhhHHHHHHHHHhCC
Confidence 46778899999 9999999999999998888888999986
No 223
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=54.56 E-value=33 Score=34.05 Aligned_cols=46 Identities=15% Similarity=0.387 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHcCCCcCCccEEE-EeeccCCCCCCcHHHHHHHHhc
Q 018515 55 SMSLTAVTNLLEKYKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFE 101 (354)
Q Consensus 55 ~La~~Aa~~aL~~agi~~~dId~lI-~aT~t~~~~~p~~a~~v~~~LG 101 (354)
....+|.++||+++|++|+|||+|. ++|.|+.. -+.-...|++.+|
T Consensus 254 ~~~~~ai~~Al~~agi~p~dId~i~~hgtgt~~~-D~~E~~al~~~fg 300 (381)
T PRK05952 254 KSAIAAIQQCLARSGLTPEDIDYIHAHGTATRLN-DQREANLIQALFP 300 (381)
T ss_pred HHHHHHHHHHHHHhCCCHHHeeEEEccCCCCCCC-cHHHHHHHHHHcC
Confidence 4567999999999999999999996 56655432 2222334455554
No 224
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=54.09 E-value=43 Score=33.52 Aligned_cols=47 Identities=15% Similarity=0.186 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHH-cCCCcCCccEEE-EeeccCCCCCCcHHHHHHHHhcC
Q 018515 55 SMSLTAVTNLLEK-YKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFEK 102 (354)
Q Consensus 55 ~La~~Aa~~aL~~-agi~~~dId~lI-~aT~t~~~~~p~~a~~v~~~LGl 102 (354)
.-..+|+++||++ +|++|+|||+|- .+|.|+.. -+.-..-+.+.+|-
T Consensus 283 ~~~~~ai~~Al~~~Agi~~~dId~ie~hgtgt~~~-D~~E~~al~~~~~~ 331 (421)
T PTZ00050 283 RGARRCMENALKDGANININDVDYVNAHATSTPIG-DKIELKAIKKVFGD 331 (421)
T ss_pred HHHHHHHHHHHHhccCCChhhCCEEECCCccCCCC-CHHHHHHHHHHhcc
Confidence 3456899999999 999999999996 56555332 12222345556653
No 225
>PRK12404 stage V sporulation protein AD; Provisional
Probab=53.16 E-value=37 Score=33.07 Aligned_cols=76 Identities=16% Similarity=0.090 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHhhchhCCCCCccccceecccCCch-HHHH-HHHHHhhhhhhhhccccchhHhhhccCCCCCCCCCccc
Q 018515 216 ALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYN-KLVQ-KSFARLLFNDFMRNASSVDEAAKEKLGPFSTLSGDESY 293 (354)
Q Consensus 216 ~~~~~i~~~l~~~g~~~~~~l~~~Did~~v~HQan~-~ii~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (354)
...++++.+|++++ ++++|||+++...... .+.- .+++.|++ |
T Consensus 57 L~~EA~~~AL~kAG------I~~~DID~i~vGdL~nQ~ipssfvar~LGI------------------------P----- 101 (334)
T PRK12404 57 LLEEACSRAIEKAK------LRKEDIQFFLAGDLMNQITPTSFAARTLGI------------------------P----- 101 (334)
T ss_pred HHHHHHHHHHHHcC------CCHHHCCEEEEEecCCCcCcHHHHHHHhCC------------------------C-----
Confidence 45578888888888 9999999999964331 1111 33344442 1
Q ss_pred cchhHHHHHHhhhhhHHHhhcccccccccccCccchHHHHHHHHHH-hccCchhhhhhhc
Q 018515 294 QSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTASLYAALASL-IHNKHSELVIAFT 352 (354)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~GN~~saSip~~L~~~-l~~~~~~~~~~~~ 352 (354)
. .+-+|-.+|.+--+.++.. ++.+..+.+++.|
T Consensus 102 -----------------------~---~gV~gACSTg~eAL~lAa~~VaSG~Ad~VLavt 135 (334)
T PRK12404 102 -----------------------Y---LGLFGACSTSMEGLALAALIVNSGGAKYVLTGA 135 (334)
T ss_pred -----------------------c---cceeecCHHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 1 3567888888888887764 4567777777654
No 226
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=52.77 E-value=15 Score=37.03 Aligned_cols=25 Identities=20% Similarity=0.332 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHcCCCcCCccEEEEe
Q 018515 57 SLTAVTNLLEKYKIDPKQIGRLEVG 81 (354)
Q Consensus 57 a~~Aa~~aL~~agi~~~dId~lI~a 81 (354)
.+.|+++||+++|++++|||++-+-
T Consensus 309 ~~~a~~~al~~aGl~~~did~~ei~ 333 (426)
T PRK08170 309 PVHAATPLLQRHGLTLEDLDLWEIN 333 (426)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEec
Confidence 5689999999999999999998654
No 227
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=52.17 E-value=28 Score=34.40 Aligned_cols=96 Identities=9% Similarity=-0.023 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCC----------CeeEE-ee-cCcChHHHH
Q 018515 55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNT----------DIEGV-DS-TNACYGGTA 122 (354)
Q Consensus 55 ~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~----------~~~a~-Di-~~aC~g~~~ 122 (354)
+...++.++.|++.|+.++|||.+++....+....++.. .+.+.++. +. +.... .+ |.+|++-..
T Consensus 205 ~~~~~~~~~~l~~~g~~~~did~~i~H~p~~~~~~k~~~-~~l~~~~~--~~~~~~~~~~~~s~~~~~~~GN~~sas~~l 281 (379)
T TIGR01835 205 NAFENAWNDYAKRTGLSLADFAAFCFHVPFTKMGLKALR-HILKKNYE--DEDESVQNAYLESIIYNREVGNLYTGSLYL 281 (379)
T ss_pred HHHHHHHHHHHHHhCCCHHHcCEEEECCCCCcHHHHHHH-HHHhhccc--ccHHHHHHHhhhhhhhhhhcCchHhHHHHH
Confidence 355688899999999999999999988532222112222 34455555 21 00111 34 346666666
Q ss_pred HHHHHHHHHHcC--CCCCCEEEEEeecccccCCCCCCCcccceeEEEEec
Q 018515 123 ALFNCVNWVESS--SWDGRYGLVVCTDSAVYAEGPARPTGGAAAVVMLVG 170 (354)
Q Consensus 123 aL~~A~~~i~sg--~~~~~~vLVV~~e~~~~~~~~~~~~~GDGAaA~ll~ 170 (354)
+|..+ ++.+ ..+++++++++ +|.|++|-+.+
T Consensus 282 ~L~~~---l~~~~~~~~Gd~ill~s--------------~GsG~~ae~~~ 314 (379)
T TIGR01835 282 GLASL---LENAFEDTTGDKIGLFS--------------YGSGAVAEFFS 314 (379)
T ss_pred HHHHH---HHhcccCCCCCEEEEEE--------------ecCCcceeeEE
Confidence 66544 3332 11457777654 46676665553
No 228
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=51.64 E-value=64 Score=32.00 Aligned_cols=48 Identities=17% Similarity=0.257 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHcCCCcCCccEEE-EeeccCCCCCCcHHHHHHHHhcC
Q 018515 54 ISMSLTAVTNLLEKYKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFEK 102 (354)
Q Consensus 54 ~~La~~Aa~~aL~~agi~~~dId~lI-~aT~t~~~~~p~~a~~v~~~LGl 102 (354)
.....+|+++||+++|+.++|||++. ++|.|+.. ...-...+...+|.
T Consensus 278 ~~~~~~a~~~al~~Agl~~~dId~i~~h~tgt~~~-d~~E~~al~~~~~~ 326 (424)
T smart00825 278 GPAQARLIRQALARAGVDPADVDYVEAHGTGTPLG-DPIEAEALAAVFGQ 326 (424)
T ss_pred HHHHHHHHHHHHHHhCCCHHHccEEEeeCCCCCCC-CHHHHHHHHHHHhc
Confidence 34556899999999999999999997 55655432 12223445555553
No 229
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=51.47 E-value=54 Score=32.32 Aligned_cols=82 Identities=16% Similarity=0.132 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHHcCCCcCCccEEE-EeeccCCCCCCcHHHHHHHHhcCCCC--CCeeEEe----ecC-cChHHHHHHH
Q 018515 54 ISMSLTAVTNLLEKYKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFEKFGN--TDIEGVD----STN-ACYGGTAALF 125 (354)
Q Consensus 54 ~~La~~Aa~~aL~~agi~~~dId~lI-~aT~t~~~~~p~~a~~v~~~LGl~g~--~~~~a~D----i~~-aC~g~~~aL~ 125 (354)
..-..+|+++||+++|++++|||+|. ++|.|+.. -+.-...+...++-.++ ..++... +++ ..++++..|.
T Consensus 278 ~~~~~~a~~~al~~Agi~~~did~i~~hgtgt~~~-D~~E~~al~~~f~~~~~~~~~~~v~s~k~~~Gh~~~aag~~~l~ 356 (421)
T cd00833 278 GEAQAALIRRAYARAGVDPSDIDYVEAHGTGTPLG-DPIEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLI 356 (421)
T ss_pred HHHHHHHHHHHHHHhCCCHHHCcEEEeeCCCCCCC-CHHHHHHHHHHHhccCCCCCceeeecCcCccccchhhhHHHHHH
Confidence 44566899999999999999999997 45554322 12223344444443100 1222222 221 2334444555
Q ss_pred HHHHHHHcCCC
Q 018515 126 NCVNWVESSSW 136 (354)
Q Consensus 126 ~A~~~i~sg~~ 136 (354)
.+...++.|..
T Consensus 357 ~~~~~l~~~~i 367 (421)
T cd00833 357 KVVLALEHGVI 367 (421)
T ss_pred HHHHHHhcCCc
Confidence 55566776643
No 230
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=51.30 E-value=23 Score=35.25 Aligned_cols=40 Identities=10% Similarity=0.159 Sum_probs=33.5
Q ss_pred HHHHHHHHHHhhchhCCCCCccccceecccCCchHHHHHHHHHhhh
Q 018515 218 DTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLF 263 (354)
Q Consensus 218 ~~~i~~~l~~~g~~~~~~l~~~Did~~v~HQan~~ii~~~~~~l~~ 263 (354)
..+++++++++| ++++|||+|=+|-++.-......+.||+
T Consensus 298 ~~a~~~al~~ag------l~~~Did~~ei~d~fa~~~l~~~e~lg~ 337 (397)
T PRK06954 298 VGAIRKLFEKNG------WRAAEVDLFEINEAFAVVTMAAMKEHGL 337 (397)
T ss_pred HHHHHHHHHHcC------CCHHHCCEEehhhHHHHHHHHHHHHhCC
Confidence 468889999999 9999999999998887666666677875
No 231
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=51.21 E-value=28 Score=33.67 Aligned_cols=38 Identities=8% Similarity=0.085 Sum_probs=31.2
Q ss_pred HHHHHHHHhhchhCCCCCccccceecccCCchHHHHHHHHHhhh
Q 018515 220 CYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLF 263 (354)
Q Consensus 220 ~i~~~l~~~g~~~~~~l~~~Did~~v~HQan~~ii~~~~~~l~~ 263 (354)
+|..+++++| ++.+|||+|=...+..-=...-.++|++
T Consensus 325 AIp~alk~aG------L~v~did~FEINEAFAsQ~~yc~~KL~l 362 (435)
T KOG1389|consen 325 AIPKALKAAG------LEVDDIDLFEINEAFASQALYCRNKLGL 362 (435)
T ss_pred hhHHHHHHcC------CcccccceeehhHHHHHHHHHHHHHhCC
Confidence 5678888999 9999999998887776666667788875
No 232
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=51.05 E-value=13 Score=37.64 Aligned_cols=24 Identities=8% Similarity=0.083 Sum_probs=21.5
Q ss_pred HHHHHHHHHHcCCCcCCccEEEEe
Q 018515 58 LTAVTNLLEKYKIDPKQIGRLEVG 81 (354)
Q Consensus 58 ~~Aa~~aL~~agi~~~dId~lI~a 81 (354)
..|+++||+++|++++|||++-+-
T Consensus 314 ~~a~~~al~~Agl~~~Did~~Ei~ 337 (430)
T TIGR02446 314 SYATPLALQRAGLALSDLTLIDMH 337 (430)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEec
Confidence 479999999999999999998654
No 233
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=49.90 E-value=27 Score=34.69 Aligned_cols=41 Identities=15% Similarity=0.136 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHhhchhCCCCCccccceecccCCchHHHHHHHHHhhh
Q 018515 217 LDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLF 263 (354)
Q Consensus 217 ~~~~i~~~l~~~g~~~~~~l~~~Did~~v~HQan~~ii~~~~~~l~~ 263 (354)
...++++++++++ ++++|||++=+|-++.-......+.||+
T Consensus 294 ~~~a~~~al~~Ag------l~~~dId~~e~~d~f~~~~l~~~e~lg~ 334 (394)
T PRK06445 294 PVPASKKALEKAG------LSVKDIDLWEINEAFAVVVLYAIKELGL 334 (394)
T ss_pred HHHHHHHHHHHcC------CCHHHcCEEEecccchHHHHHHHHHhCC
Confidence 3468889999999 9999999999999998888888899986
No 234
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=49.44 E-value=48 Score=33.07 Aligned_cols=46 Identities=17% Similarity=0.192 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHcCCCcCCccEEE-EeeccCCCCCCcHHHHHHHHhcC
Q 018515 56 MSLTAVTNLLEKYKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFEK 102 (354)
Q Consensus 56 La~~Aa~~aL~~agi~~~dId~lI-~aT~t~~~~~p~~a~~v~~~LGl 102 (354)
-..++.+++|+++|++|+|||+|. ++|.|+.. -+.-+..|.+.+|-
T Consensus 276 ~~~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~~-D~~E~~Ai~~~fg~ 322 (405)
T PRK09116 276 TMQIAMELALKDAGLAPEDIGYVNAHGTATDRG-DIAESQATAAVFGA 322 (405)
T ss_pred HHHHHHHHHHHHhCCCHHHcCEEECcCccCCCC-CHHHHHHHHHHhCC
Confidence 445899999999999999999996 66666433 34445556677763
No 235
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=49.24 E-value=32 Score=33.96 Aligned_cols=39 Identities=10% Similarity=0.091 Sum_probs=35.1
Q ss_pred HHHHHHHHHhhchhCCCCCccccceecccCCchHHHHHHHHHhhh
Q 018515 219 TCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLF 263 (354)
Q Consensus 219 ~~i~~~l~~~g~~~~~~l~~~Did~~v~HQan~~ii~~~~~~l~~ 263 (354)
.++++++++++ ++++|||++=+|-+..-+.....+.||+
T Consensus 284 ~a~~~a~~~ag------i~~~did~~e~~d~Fa~~~~~~~e~lG~ 322 (382)
T PRK07801 284 PATRYALEKTG------LSIDDIDVVEINEAFAPVVLAWLKETGA 322 (382)
T ss_pred HHHHHHHHHcC------CCHHHcCEeeecccchHHHHHHHHHhCC
Confidence 57889999999 9999999999999998888888888886
No 236
>PRK05790 putative acyltransferase; Provisional
Probab=48.49 E-value=29 Score=34.35 Aligned_cols=40 Identities=13% Similarity=0.091 Sum_probs=33.4
Q ss_pred HHHHHHHHHHhhchhCCCCCccccceecccCCchHHHHHHHHHhhh
Q 018515 218 DTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLF 263 (354)
Q Consensus 218 ~~~i~~~l~~~g~~~~~~l~~~Did~~v~HQan~~ii~~~~~~l~~ 263 (354)
..++++++++++ ++++|||++=+|-+..-......+.+|+
T Consensus 294 ~~a~~~a~~~Ag------i~~~did~~e~~d~f~~~~l~~~e~lg~ 333 (393)
T PRK05790 294 VPAIRKALEKAG------WSLADLDLIEINEAFAAQALAVEKELGL 333 (393)
T ss_pred HHHHHHHHHHcC------CCHHHCCEEEeCcHHHHHHHHHHHHhCC
Confidence 367889999999 9999999999998877666667778875
No 237
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=47.74 E-value=13 Score=37.20 Aligned_cols=28 Identities=14% Similarity=0.364 Sum_probs=24.0
Q ss_pred HHHHHHHHHHcCCCcCCccEEE-EeeccC
Q 018515 58 LTAVTNLLEKYKIDPKQIGRLE-VGSETV 85 (354)
Q Consensus 58 ~~Aa~~aL~~agi~~~dId~lI-~aT~t~ 85 (354)
.+++++||+++|++|+|||+|. ++|.|+
T Consensus 284 ~~a~~~Al~~Agi~~~dId~v~~hgtgt~ 312 (410)
T PRK07103 284 MRVIRAALRRAGLGPEDIDYVNPHGTGSP 312 (410)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEccCCCCC
Confidence 5899999999999999999986 566554
No 238
>COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=45.93 E-value=60 Score=29.64 Aligned_cols=63 Identities=10% Similarity=0.059 Sum_probs=42.1
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeec
Q 018515 50 VEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDST 114 (354)
Q Consensus 50 ~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~ 114 (354)
...-++......+.+|.++|++..|||.|+++..-+.+-.-=++.-+++-|.+ ..+++.+-|+
T Consensus 34 ~r~hse~l~~~i~~ll~~~~~~~~dld~iav~~GPGSFTGlRIG~~~AkgLA~--~l~iplvgvs 96 (220)
T COG1214 34 KRNHAERLMPMIDELLKEAGLSLQDLDAIAVAKGPGSFTGLRIGVAFAKGLAL--ALNIPLVGVS 96 (220)
T ss_pred cccHHHHHHHHHHHHHHHcCCCHHHCCEEEEccCCCcccchhhHHHHHHHHHH--HcCCCEEEeC
Confidence 34556778899999999999999999999998643322211144445555554 3455666554
No 239
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=45.90 E-value=33 Score=34.11 Aligned_cols=40 Identities=13% Similarity=0.118 Sum_probs=34.5
Q ss_pred HHHHHHHHHHhhchhCCCCCccccceecccCCchHHHHHHHHHhhh
Q 018515 218 DTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLF 263 (354)
Q Consensus 218 ~~~i~~~l~~~g~~~~~~l~~~Did~~v~HQan~~ii~~~~~~l~~ 263 (354)
..+++.+++++| ++++|||++=+|-+..-......+.||+
T Consensus 294 ~~a~~~al~~ag------l~~~did~~e~~d~f~~~~l~~~e~lg~ 333 (393)
T PRK08235 294 GYAINALLEKTG------KTVEDIDLFEINEAFAAVALASTEIAGI 333 (393)
T ss_pred HHHHHHHHHHhC------CCHHHCCeehhcchhHHHHHHHHHHhCC
Confidence 368889999999 9999999999999887777777788885
No 240
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=45.38 E-value=63 Score=32.59 Aligned_cols=43 Identities=12% Similarity=0.013 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHcCCC--cCCccEEEEeeccCCCCCCcHHHHHHHHhcC
Q 018515 55 SMSLTAVTNLLEKYKID--PKQIGRLEVGSETVIDKSKSIKTFLMQIFEK 102 (354)
Q Consensus 55 ~La~~Aa~~aL~~agi~--~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl 102 (354)
.....|+++|++++|++ ++|||.+-+--+ .+.......+.||+
T Consensus 293 ~~~~~a~~~a~~~AGl~~~~~DiD~~Ei~D~-----Fa~~~l~~lE~lGl 337 (430)
T PRK06365 293 RAGRMAAKEAYEMAGITDPLNDLDLIELHDA-----YTSSEIQTYEDLGL 337 (430)
T ss_pred HHHHHHHHHHHHHcCCCCCHHHCCEEEeecC-----CcHHHHHHHHHcCC
Confidence 34468999999999997 799999866522 23445566678887
No 241
>PLN03169 chalcone synthase family protein; Provisional
Probab=45.13 E-value=44 Score=33.27 Aligned_cols=79 Identities=16% Similarity=0.120 Sum_probs=49.2
Q ss_pred HHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCC-ee----EE-ee-cCcChHHHHHHHHHHHHH
Q 018515 59 TAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTD-IE----GV-DS-TNACYGGTAALFNCVNWV 131 (354)
Q Consensus 59 ~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~-~~----a~-Di-~~aC~g~~~aL~~A~~~i 131 (354)
...+++|+++|++++|||.+.++-..+ -+.+-..++++||+ +++ +. .+ +. |.++++-..+|+.+.
T Consensus 285 ~~i~~~L~~~gl~~~did~~~~v~Hq~---n~~il~~v~~~Lgl--~~ek~~~s~~~l~~~GNtsSasip~~L~~~~--- 356 (391)
T PLN03169 285 GFCKKLMKKAGLVEKDYNDLFWAVHPG---GPAILNRLEKKLKL--APEKLECSRRALMDYGNVSSNTIVYVLEYMR--- 356 (391)
T ss_pred HHHHHHHHHcCCCCCCCCcceEEecCC---CHHHHHHHHHHcCC--CHHHHHHHHHHHHHhCCchHhHHHHHHHHHH---
Confidence 456889999999999999443332111 13556678899999 433 22 12 34 568888888887654
Q ss_pred HcCCC----CCCEEEEEe
Q 018515 132 ESSSW----DGRYGLVVC 145 (354)
Q Consensus 132 ~sg~~----~~~~vLVV~ 145 (354)
+.+.. +++++|+++
T Consensus 357 ~~~~~~~~~~gd~~ll~a 374 (391)
T PLN03169 357 EELKKKGEEDEEWGLILA 374 (391)
T ss_pred HhhcccCCCCCcEEEEEE
Confidence 33211 236677665
No 242
>PRK14878 UGMP family protein; Provisional
Probab=44.39 E-value=57 Score=31.56 Aligned_cols=26 Identities=23% Similarity=0.227 Sum_probs=23.1
Q ss_pred HHHHHHHHHHcCCCcCCccEEEEeec
Q 018515 58 LTAVTNLLEKYKIDPKQIGRLEVGSE 83 (354)
Q Consensus 58 ~~Aa~~aL~~agi~~~dId~lI~aT~ 83 (354)
..+.+++|+++|++++|||.|.+...
T Consensus 49 ~~~i~~~l~~a~~~~~did~Iavt~g 74 (323)
T PRK14878 49 PELLRKALEKAGISIEDIDAVAVSQG 74 (323)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEecC
Confidence 38899999999999999999988853
No 243
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=44.11 E-value=26 Score=34.94 Aligned_cols=40 Identities=10% Similarity=0.053 Sum_probs=31.7
Q ss_pred HHHHHHHHHHhhchhCCCCCccccceecccCCchHHHHHHHHHhhh
Q 018515 218 DTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLF 263 (354)
Q Consensus 218 ~~~i~~~l~~~g~~~~~~l~~~Did~~v~HQan~~ii~~~~~~l~~ 263 (354)
..++++++++++ ++++|||++=+|-++.-......+.||+
T Consensus 293 ~~a~~~al~~ag------l~~~Did~~ei~eafa~~~l~~~e~lg~ 332 (392)
T PRK07108 293 VFAVPKLLKQAG------LKVDDIDLWELNEAFAVQVLYCRDTLGI 332 (392)
T ss_pred HHHHHHHHHHcC------CCHHHcCchHhhhHHHHHHHHHHHhcCC
Confidence 468889999999 9999999999998775554455566664
No 244
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=42.48 E-value=31 Score=34.77 Aligned_cols=46 Identities=15% Similarity=0.256 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHcCCCcCCccEEE-EeeccCCCCCCcHHHHHHHHhc
Q 018515 55 SMSLTAVTNLLEKYKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFE 101 (354)
Q Consensus 55 ~La~~Aa~~aL~~agi~~~dId~lI-~aT~t~~~~~p~~a~~v~~~LG 101 (354)
.-..+|+++||+++|++|+|||+|- ++|.|+.. -+.-...+...+|
T Consensus 299 ~~~~~a~~~Al~~Agi~~~dId~ve~hgtgt~~~-D~~E~~ai~~~~~ 345 (437)
T PLN02836 299 RGAVLAMTRALQQSGLHPNQVDYVNAHATSTPLG-DAVEARAIKTVFS 345 (437)
T ss_pred HHHHHHHHHHHHHcCCCHhHcCEEEccCCcCcCc-CHHHHHHHHHHhc
Confidence 3456789999999999999999996 55655432 2222333455554
No 245
>TIGR03722 arch_KAE1 universal archaeal protein Kae1. This family represents the archaeal protein Kae1. Its partner Bud32 is fused with it in about half of the known archaeal genomes. The pair, which appears universal in the archaea, corresponds to EKC/KEOPS complex in eukaryotes. A recent characterization of the member from Pyrococcus abyssi, as an iron-binding, atypical DNA-binding protein with an apurinic lyase activity, challenges the common annotation of close homologs as O-sialoglycoprotein endopeptidase. The latter annotation is based on a characterized protein from the bacterium Pasteurella haemolytica.
Probab=42.16 E-value=51 Score=31.80 Aligned_cols=26 Identities=12% Similarity=0.176 Sum_probs=22.6
Q ss_pred HHHHHHHHHHcCCCcCCccEEEEeec
Q 018515 58 LTAVTNLLEKYKIDPKQIGRLEVGSE 83 (354)
Q Consensus 58 ~~Aa~~aL~~agi~~~dId~lI~aT~ 83 (354)
....+++|+++|++++|||.|.+.+.
T Consensus 50 ~~~i~~~l~~~~~~~~did~Iavt~g 75 (322)
T TIGR03722 50 PKLIKEALEEAGVSLEDIDAVAFSQG 75 (322)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEecC
Confidence 34599999999999999999998853
No 246
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family. This subfamily includes the well-studied secreted O-sialoglycoprotein endopeptidase (glycoprotease, EC 3.4.24.57) of Pasteurella haemolytica, a pathogen. A member from Riemerella anatipestifer, associated with cohemolysin activity, likewise is exported without benefit of a classical signal peptide and shows glycoprotease activity on the test substrate glycophorin. However, archaeal members of this subfamily show unrelated activities as demonstrated in Pyrococcus abyssi: DNA binding, iron binding, apurinic endonuclease activity, genomic association with a kinase domain, and no glycoprotease activity. This family thus pulls together a set of proteins as a homology group that appears to be near-universal in life, yet heterogeneous in assayed function between bacteria and archaea.
Probab=41.12 E-value=35 Score=32.68 Aligned_cols=30 Identities=10% Similarity=0.059 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHcCCCcCCccEEEEeec
Q 018515 54 ISMSLTAVTNLLEKYKIDPKQIGRLEVGSE 83 (354)
Q Consensus 54 ~~La~~Aa~~aL~~agi~~~dId~lI~aT~ 83 (354)
+..-....+++|+++|++++|||.|.++..
T Consensus 49 ~~~l~~~i~~~l~~~~~~~~did~iav~~G 78 (305)
T TIGR00329 49 AENIPPLLERALIESNVDKSEIDLIAYTQG 78 (305)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecC
Confidence 445667789999999999999999998864
No 247
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=40.27 E-value=46 Score=33.09 Aligned_cols=39 Identities=10% Similarity=0.122 Sum_probs=33.6
Q ss_pred HHHHHHHHHhhchhCCCCCccccceecccCCchHHHHHHHHHhhh
Q 018515 219 TCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLF 263 (354)
Q Consensus 219 ~~i~~~l~~~g~~~~~~l~~~Did~~v~HQan~~ii~~~~~~l~~ 263 (354)
.++++++++++ ++++|||++=+|-+..-......+.+|+
T Consensus 295 ~a~~~al~~Ag------i~~~Did~~Ei~d~f~~~~l~~~e~lg~ 333 (394)
T PLN02644 295 LAIPKALKHAG------LEASQVDYYEINEAFSVVALANQKLLGL 333 (394)
T ss_pred HHHHHHHHHcC------CCHHHCCEEEeCcHHHHHHHHHHHHhCC
Confidence 47889999999 9999999999999887777777788875
No 248
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=38.71 E-value=31 Score=32.61 Aligned_cols=44 Identities=14% Similarity=0.169 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcC
Q 018515 54 ISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK 102 (354)
Q Consensus 54 ~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl 102 (354)
.||...|++++.++.|+.|+||+.|-+.-+... ..-.--+.|||
T Consensus 271 fdm~~~aa~~l~aksgltpndvqvielhdcfs~-----nelityealgl 314 (408)
T KOG1406|consen 271 FDMTRLAAKRLFAKSGLTPNDVQVIELHDCFSA-----NELITYEALGL 314 (408)
T ss_pred chHHHHHHHHHHHHcCCCcccceEEEeecccch-----hhhhhHHHhcC
Confidence 479999999999999999999999987644321 22333456787
No 249
>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=38.50 E-value=42 Score=31.15 Aligned_cols=46 Identities=11% Similarity=0.033 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCc-HHHHHHHHhcC
Q 018515 56 MSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKS-IKTFLMQIFEK 102 (354)
Q Consensus 56 La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~-~a~~v~~~LGl 102 (354)
-...-.+++|+.++++.+|||+|.+.-. |....|- ..+.+++.|-+
T Consensus 52 ~il~Lv~~al~ea~v~~~diD~icyTKG-PGmgaPL~~vaivaRtlsl 98 (336)
T KOG2708|consen 52 WILGLVKQALEEAGVTSDDIDCICYTKG-PGMGAPLSVVAIVARTLSL 98 (336)
T ss_pred HHHHHHHHHHHHcCCChhhCCEEEEcCC-CCCCCchhhHHHHHHHHHH
Confidence 3445578899999999999999887643 3343343 34455555554
No 250
>TIGR03725 bact_YeaZ universal bacterial protein YeaZ. This family describes a protein family, YeaZ, that appears to be universal in bacteria, but whose function is unknown. This family is related to the gcp (glycoprotease) protein family, also universal in bacteria and unknown in function. In Gram-positive lineages, members of these two related families often belong to the same operon, along with the ribosomal-protein-alanine acetyltransferase gene. Members of this family may occur as fusions with gcp or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI.
Probab=37.73 E-value=41 Score=30.08 Aligned_cols=33 Identities=15% Similarity=0.298 Sum_probs=27.9
Q ss_pred CCHHHHHHHHHHHHHHHcCCCcCCccEEEEeec
Q 018515 51 EDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSE 83 (354)
Q Consensus 51 e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~ 83 (354)
..-++.-....+++|+++|+.++|||.|+++..
T Consensus 31 ~~h~~~l~~~i~~~l~~~~~~~~~i~~iav~~G 63 (202)
T TIGR03725 31 RNHSEILLPMIEELLAEAGLSLQDLDAIAVGVG 63 (202)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEecC
Confidence 345566778899999999999999999999864
No 251
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=34.49 E-value=52 Score=31.08 Aligned_cols=39 Identities=10% Similarity=0.062 Sum_probs=31.9
Q ss_pred HHHHHHHHHhhchhCCCCCccccceecccCCchHHHHHHHHHhhh
Q 018515 219 TCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLF 263 (354)
Q Consensus 219 ~~i~~~l~~~g~~~~~~l~~~Did~~v~HQan~~ii~~~~~~l~~ 263 (354)
.+|...|++.| +...|||.|=...+...--..+.+.|++
T Consensus 297 PAI~~vLKksG------lkl~DiDl~EvNEAFApQ~LAv~r~L~l 335 (396)
T KOG1391|consen 297 PAISGVLKKSG------LKLKDIDLVEVNEAFAPQYLAVERSLDL 335 (396)
T ss_pred HHHHHHHHHcC------CcccccceEEechhhchHHHHHHHhhCC
Confidence 67889999999 9999999998887776656666777765
No 252
>cd05125 Mth938_2P1-like Mth938_2P1-like domain. This model contains sequences that are similar to 2P1, a partially characterized nuclear protein, which is homologous to E3-3 from rat and known to be alternatively spliced. Its function is unknown. This family is part of the Mth938 family, for which structures, but no functional data are available.
Probab=33.41 E-value=69 Score=26.17 Aligned_cols=60 Identities=13% Similarity=0.151 Sum_probs=35.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCc-HHHHHHHHhcCCCCCCeeEEeecCcChHH
Q 018515 52 DVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKS-IKTFLMQIFEKFGNTDIEGVDSTNACYGG 120 (354)
Q Consensus 52 ~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~-~a~~v~~~LGl~g~~~~~a~Di~~aC~g~ 120 (354)
+..++..+....++.-. .++|.||++|.......|+ .-..+ .+.|+ .+.++|..+||..|
T Consensus 36 ~~~~l~~~~l~~l~~~~----~~peiliiGtG~~~~~~~~~~~~~l-~~~gi----~vevm~T~~Acrty 96 (114)
T cd05125 36 SFEDITEESLSLFELLE----PRPEILVIGTGRKSRPLSPELRKYF-KKLGI----AVEVVDTRNACATF 96 (114)
T ss_pred ChhhCCHHHHHHHHhcc----CCCCEEEEccCCCCCcCCHHHHHHH-HHcCC----EEEEECHHHHHHHH
Confidence 34455555544444322 3689999998654333333 22233 34566 67788888999876
No 253
>PF04430 DUF498: Protein of unknown function (DUF498/DUF598); InterPro: IPR007523 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This is entry represents an essential factor for the assembly of mitochondrial NADH:ubiquinone oxidoreductase complex (complex I) []. The crystal structure of this protein revealed a 3-layer beta+alpha/beta/alpha topology [].; PDB: 2K2E_A 2Q4Q_B 2AB1_A 2FVT_A 2CYJ_A 1IHN_B 2GM2_A 3CPK_A 2FI9_A.
Probab=33.31 E-value=29 Score=27.88 Aligned_cols=56 Identities=18% Similarity=0.196 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCC-CcHHHHHHHHhcCCCCCCeeEEeecCcChHH
Q 018515 56 MSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKS-KSIKTFLMQIFEKFGNTDIEGVDSTNACYGG 120 (354)
Q Consensus 56 La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~-p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~ 120 (354)
+..+....++.. ...+|.||++|....... |.+-.++ .+.|+ .+..+|..+||..|
T Consensus 39 l~~~~l~~l~~~----~p~pe~liiGtG~~~~~~~~~~~~~l-~~~GI----~ve~m~T~~Ac~ty 95 (110)
T PF04430_consen 39 LTPEDLEELLEL----EPKPEVLIIGTGKRQLFLPPELREYL-RKKGI----GVEVMDTPAACRTY 95 (110)
T ss_dssp EETHHHHHHHCT----CCS-SEEEEEETTS-SECTHHHHHHH-HTTT-----EEEEE-HHHHHHHH
T ss_pred CCHHHHHHHHhc----cCCCcEEEEccCCccccCCHHHHHHH-HHcCC----eEEEECHHHHHHHH
Confidence 333444444432 347899999996543322 2233344 34466 67888888999876
No 254
>PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase (3.4.24.57 from EC) from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues []. Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 [, ]. Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion [, ]. Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis []. The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 2A6A_A 2GEL_G 2GEM_B 1OKJ_B 3ENO_A 3EN9_B 2VWB_B 3ENH_B 2IVO_D 2IVP_A ....
Probab=33.13 E-value=35 Score=32.10 Aligned_cols=29 Identities=17% Similarity=0.166 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHcCCCcCCccEEEEeec
Q 018515 55 SMSLTAVTNLLEKYKIDPKQIGRLEVGSE 83 (354)
Q Consensus 55 ~La~~Aa~~aL~~agi~~~dId~lI~aT~ 83 (354)
..-....+++|+++|++++|||.|.++..
T Consensus 31 ~~L~~~i~~~l~~~~~~~~did~iavt~G 59 (268)
T PF00814_consen 31 ENLPPLIEELLKEAGISLSDIDAIAVTRG 59 (268)
T ss_dssp HHHHHHHHHHHHHHTS-GGGESEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecC
Confidence 45557899999999999999999999864
No 255
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=32.01 E-value=1.1e+02 Score=28.31 Aligned_cols=41 Identities=12% Similarity=0.029 Sum_probs=27.9
Q ss_pred HHHHHHHHHHhhchhCCCCCccccceeccc----CCchHHHHHHHHHhhhh
Q 018515 218 DTCYKCLCSKYEKLEGKQFSLSNADYFVFH----SPYNKLVQKSFARLLFN 264 (354)
Q Consensus 218 ~~~i~~~l~~~g~~~~~~l~~~Did~~v~H----Qan~~ii~~~~~~l~~~ 264 (354)
.++.++.|++.| ++++||+|+|+- ...+.+=-.++++||++
T Consensus 105 ~~Aa~~AL~~~g------~~~~dIthlv~vs~TG~~~PglD~~l~~~LgL~ 149 (226)
T PF00195_consen 105 EEAARKALAEAG------LDPSDITHLVTVSCTGIAAPGLDARLINRLGLR 149 (226)
T ss_dssp HHHHHHHHHHHT------S-GGGECEEEEEESSSSECS-HHHHHHHHHT--
T ss_pred HHHHHHHHHHcC------CCCcccceEEEEecCCcCCCchhHHHHhcCCCC
Confidence 466777777778 999999999963 23344556889999973
No 256
>COG4126 Hydantoin racemase [Amino acid transport and metabolism]
Probab=31.92 E-value=3.5e+02 Score=24.95 Aligned_cols=104 Identities=13% Similarity=0.056 Sum_probs=61.4
Q ss_pred EEEecCCccccHHHHHHhhCCCcchh-hhcccceeEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCC
Q 018515 10 MDIYFPPTCVQQEALEAHDGASKGKY-TIGLGQECMAFCSEVEDVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDK 88 (354)
Q Consensus 10 ig~ylP~~~v~~~el~~~~g~~~~~i-~~~~Gi~~r~~~~~~e~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~ 88 (354)
+-.-+|+.+.-.+++...+|+..... .+-+++.-....++.|..-.+....++++++.- .-|.|+.+. .+
T Consensus 114 ViTtt~rs~~il~~lv~~~g~s~~~~~vrstdl~vL~l~~~~~~~~~~l~~~~~~a~~ed-----gAeaIiLGC-AG--- 184 (230)
T COG4126 114 VITTTERSRPILEELVRSYGLSRHCRSVRSTDLPVLALEGPPEEAEALLVIEAAEALKED-----GAEAIILGC-AG--- 184 (230)
T ss_pred EEecCcccHHHHHHHHHhcCccccccceeeCCCCcccccCChHHHHHHHHHHHHHHhhhc-----CCCEEEEcC-cc---
Confidence 33456666666666666666543222 122333333333444555667777777776654 478888884 33
Q ss_pred CCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHHHHHcC
Q 018515 89 SKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESS 134 (354)
Q Consensus 89 ~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg 134 (354)
+-.++.+||..+|+ | ..| |-..|..++..+++.|
T Consensus 185 ms~la~~Lq~~~gv---P---VID------gv~Aav~~a~~L~~~~ 218 (230)
T COG4126 185 MSDLADQLQKAFGV---P---VID------GVAAAVKLAEGLLGMG 218 (230)
T ss_pred HHHHHHHHHHHhCC---C---ccc------chHHHHHHHHHHHhhc
Confidence 34679999999997 3 233 3345667777777665
No 257
>TIGR01991 HscA Fe-S protein assembly chaperone HscA. The Heat Shock Cognate proteins HscA and HscB act together as chaperones. HscA resembles DnaK but belongs in a separate clade. The apparent function is to aid assembly of iron-sulfur cluster proteins. Homologs from Buchnera and Wolbachia are clearly in the same clade but are highly derived and score lower than some examples of DnaK.
Probab=31.20 E-value=2.2e+02 Score=30.07 Aligned_cols=45 Identities=9% Similarity=0.197 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcC
Q 018515 56 MSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK 102 (354)
Q Consensus 56 La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl 102 (354)
=..+.++++|+++|+.+++||.|+++-.+ -.+|.+...|.+.+|.
T Consensus 294 ~i~~~i~~~L~~a~~~~~~id~ViLvGGs--sriP~V~~~l~~~f~~ 338 (599)
T TIGR01991 294 KTLSICRRALRDAGLSVEEIKGVVLVGGS--TRMPLVRRAVAELFGQ 338 (599)
T ss_pred HHHHHHHHHHHHcCCChhhCCEEEEECCc--CCChHHHHHHHHHhCC
Confidence 34567789999999999999999977533 4578999999999886
No 258
>cd01458 vWA_ku Ku70/Ku80 N-terminal domain. The Ku78 heterodimer (composed of Ku70 and Ku80) contributes to genomic integrity through its ability to bind DNA double-strand breaks (DSB) in a preferred orientation. DSB's are repaired by either homologues recombination or non-homologues end joining and facilitate repair by the non-homologous end-joining pathway (NHEJ). The Ku heterodimer is required for accurate process that tends to preserve the sequence at the junction. Ku78 is found in all three kingdoms of life. However, only the eukaryotic proteins have a vWA domain fused to them at their N-termini. The vWA domain is not involved in DNA binding but may very likey mediate Ku78's interactions with other proteins. Members of this subgroup lack the conserved MIDAS motif.
Probab=30.95 E-value=3.5e+02 Score=24.09 Aligned_cols=82 Identities=12% Similarity=0.140 Sum_probs=50.8
Q ss_pred CCHHHHHHHHHHHHHHHc--CCCcCCccEEEEeeccCCC------------CCCcHHHHHHHHhcCCCCCCeeEEee---
Q 018515 51 EDVISMSLTAVTNLLEKY--KIDPKQIGRLEVGSETVID------------KSKSIKTFLMQIFEKFGNTDIEGVDS--- 113 (354)
Q Consensus 51 e~~~~La~~Aa~~aL~~a--gi~~~dId~lI~aT~t~~~------------~~p~~a~~v~~~LGl~g~~~~~a~Di--- 113 (354)
.+..+++.+++.+++.+- .-+-+.|++|+++|..... ..++.+..+...+.+- .+....+..
T Consensus 23 ~s~l~~a~~~i~~~~~~ki~~~~~D~vGlilf~t~~~~~~~~~~~i~v~~~l~~~~~~~l~~l~~~~-~~~~~~~~~~~~ 101 (218)
T cd01458 23 ESPFEEALKCIRQLMKSKIISSPKDLVGVVFYGTEESKNPVGYENIYVLLDLDTPGAERVEDLKELI-EPGGLSFAGQVG 101 (218)
T ss_pred CChHHHHHHHHHHHHHhceeCCCCCeEEEEEEcccCCCCcCCCCceEEeecCCCCCHHHHHHHHHHh-hcchhhhcccCC
Confidence 578899999999999863 3345779999999863111 1123344555444431 111111111
Q ss_pred cCcChHHHHHHHHHHHHHHc
Q 018515 114 TNACYGGTAALFNCVNWVES 133 (354)
Q Consensus 114 ~~aC~g~~~aL~~A~~~i~s 133 (354)
......+..||.+|..++..
T Consensus 102 ~~~~~~l~~aL~~a~~~~~~ 121 (218)
T cd01458 102 DSGQVSLSDALWVCLDLFSK 121 (218)
T ss_pred CCCCccHHHHHHHHHHHHHh
Confidence 23456788999999999985
No 259
>TIGR02177 PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family. Several related four-subunit enzymes may exist in the same species. This model describes a subfamily of beta subunits, representing mostly pyruvate and 2-ketoisovalerate specific enzymes.
Probab=29.79 E-value=2.2e+02 Score=27.13 Aligned_cols=20 Identities=30% Similarity=0.527 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHcCCCcCCc
Q 018515 56 MSLTAVTNLLEKYKIDPKQI 75 (354)
Q Consensus 56 La~~Aa~~aL~~agi~~~dI 75 (354)
....|..++|++.+++|+|.
T Consensus 11 ~i~~~~~~a~~~l~~~p~d~ 30 (287)
T TIGR02177 11 GILSALQRALAELNLDPEQV 30 (287)
T ss_pred HHHHHHHHHHHHhcCCCCCE
Confidence 45678899999999999873
No 260
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=29.56 E-value=67 Score=31.45 Aligned_cols=83 Identities=10% Similarity=0.009 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCc--HHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHHHHHc
Q 018515 56 MSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKS--IKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVES 133 (354)
Q Consensus 56 La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~--~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~~i~s 133 (354)
-.....+++|+++|++.+|||+|-+.. ++-..++ .....++.|.+ .-+.+-+-| +-|-|=+++-......
T Consensus 53 ~i~~li~~al~eA~~~~~dID~IA~T~--gPGL~gaL~VG~~~Ak~LA~--a~~kPli~V-nH~~gHi~a~~l~~~~--- 124 (342)
T COG0533 53 NIPPLIEEALAEAGVSLEDIDAIAVTA--GPGLGGALLVGATAAKALAL--ALNKPLIPV-NHLEGHIEAARLETGL--- 124 (342)
T ss_pred HHHHHHHHHHHHcCCCcccCCEEEEec--CCCchhHHHHHHHHHHHHHH--HhCCCEeec-chHHHHHHHHHhccCC---
Confidence 344678899999999999999988764 3444454 23333343332 112223333 3455555443332221
Q ss_pred CCCCCCEEEEEeecc
Q 018515 134 SSWDGRYGLVVCTDS 148 (354)
Q Consensus 134 g~~~~~~vLVV~~e~ 148 (354)
.+ .--+|+|++=-
T Consensus 125 -~~-p~v~LlVSGGH 137 (342)
T COG0533 125 -AF-PPVALLVSGGH 137 (342)
T ss_pred -CC-CcEEEEEecCc
Confidence 22 24567777644
No 261
>PRK05183 hscA chaperone protein HscA; Provisional
Probab=29.49 E-value=2.2e+02 Score=30.15 Aligned_cols=44 Identities=9% Similarity=0.225 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcC
Q 018515 57 SLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK 102 (354)
Q Consensus 57 a~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl 102 (354)
..+.++++|+++|+.+++||.|+++-.+ -.+|.+...|.+.+|.
T Consensus 311 ~~~~i~~~L~~a~~~~~~i~~ViLvGGs--sriP~v~~~l~~~fg~ 354 (616)
T PRK05183 311 TLLACRRALRDAGVEADEVKEVVMVGGS--TRVPLVREAVGEFFGR 354 (616)
T ss_pred HHHHHHHHHHHcCCCcccCCEEEEECCc--ccChHHHHHHHHHhcc
Confidence 4456789999999999999999987543 4578999999999886
No 262
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed
Probab=29.07 E-value=1.2e+02 Score=30.12 Aligned_cols=50 Identities=16% Similarity=0.190 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCC--c-----HHHHHHHHhcC
Q 018515 53 VISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSK--S-----IKTFLMQIFEK 102 (354)
Q Consensus 53 ~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p--~-----~a~~v~~~LGl 102 (354)
...+-.+|++++++++|+++++||+|=+.-+|-.+..+ . -...|++++|+
T Consensus 69 lg~~~a~av~~~~~~~~l~~~~id~IgsHGQTv~H~P~~~~TlQiG~~~~iA~~tgi 125 (365)
T PRK09585 69 LGRLFAEAVNALLAEAGLSPEDIDAIGSHGQTVRHRPGEGFTLQIGDGALIAELTGI 125 (365)
T ss_pred HHHHHHHHHHHHHHHcCCCccCccEEEeCCcccccCCCCCCeEEcCCHHHHHHHHCc
Confidence 34577899999999999999999999888777544321 1 46789999998
No 263
>cd05560 Xcc1710_like Xcc1710_like family, specific to proteobacteria. Xcc1710 is a hypothetical protein from Xanthomonas campestris pv. campestris str. ATCC 33913, similar to Mth938, a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. Their three-dimensional structures have been determined, but their functions are unknown.
Probab=28.69 E-value=75 Score=25.61 Aligned_cols=58 Identities=16% Similarity=0.099 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCc-HHHHHHHHhcCCCCCCeeEEeecCcChHHH
Q 018515 53 VISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKS-IKTFLMQIFEKFGNTDIEGVDSTNACYGGT 121 (354)
Q Consensus 53 ~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~-~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~ 121 (354)
.+++..+-...+++. +.+.||++|.......|+ .-..+ .+.|+ .+.++|..+||..|=
T Consensus 37 ~~~l~~e~l~~l~~~------~peiliiGTG~~~~~~~~~~~~~l-~~~gi----~vE~m~T~~AcrTyN 95 (109)
T cd05560 37 FEDLTAAHFEALLAL------QPEVILLGTGERQRFPPPALLAPL-LARGI----GVEVMDTQAACRTYN 95 (109)
T ss_pred cccCCHHHHHHHHhc------CCCEEEEecCCCCCcCCHHHHHHH-HHcCC----eEEEECHHHHHHHHH
Confidence 445665656666653 257999998543332222 22222 23465 577888889998763
No 264
>PF14574 DUF4445: Domain of unknown function (DUF4445); PDB: 3ZYY_X.
Probab=28.61 E-value=85 Score=31.64 Aligned_cols=43 Identities=16% Similarity=0.158 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHhhchhCCCCCccccceecccCCchH-HHHHHHHHhhh
Q 018515 215 MALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNK-LVQKSFARLLF 263 (354)
Q Consensus 215 ~~~~~~i~~~l~~~g~~~~~~l~~~Did~~v~HQan~~-ii~~~~~~l~~ 263 (354)
-++...++-+|++++ ++++|||++++--+.+. +-.+-+.++|+
T Consensus 308 aAi~aGi~~Ll~~ag------i~~~di~~v~lAG~FG~~l~~~~a~~iGL 351 (412)
T PF14574_consen 308 AAIRAGIEILLEEAG------ISPEDIDRVYLAGGFGNYLDPESAIRIGL 351 (412)
T ss_dssp HHHHHHHHHHHHHTT--------GGG--EEEEECSS-SEEEHHHHHHTTS
T ss_pred HHHHHHHHHHHHHcC------CCHHHccEEEEeCcccccCCHHHHhhcCC
Confidence 356678999999999 99999999998665555 33344556664
No 265
>cd00248 Mth938-like Mth938-like domain. The members of this family include: Mth938, 2P1, Xcr35, Rpa2829, and several uncharacterized sequences. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as a dimer, although it is monomeric in solution, with one disulfide bond in each monomer. 2P1 is a partially characterized nuclear protein which is homologous to E3-3 from rat and known to be alternately spliced. Xcr35 and Rpa2829 are hypothetical proteins of unknown function from the Xanthomonas campestris and Rhodopseudomonas palustris genomes, respectively, for which the crystal structures have been determined.
Probab=28.51 E-value=63 Score=26.01 Aligned_cols=59 Identities=19% Similarity=0.218 Sum_probs=35.5
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCc-HHHHHHHHhcCCCCCCeeEEeecCcChHH
Q 018515 52 DVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKS-IKTFLMQIFEKFGNTDIEGVDSTNACYGG 120 (354)
Q Consensus 52 ~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~-~a~~v~~~LGl~g~~~~~a~Di~~aC~g~ 120 (354)
+..++..+....++.. + .+|.||++|.-.....|+ .-..+ .+.|+ .+..+|..+||..|
T Consensus 35 ~~~~l~~~~l~~~~~~---~--~peiliiGTG~~~~~~~~~~~~~l-~~~gI----~vE~m~T~aAcrTy 94 (109)
T cd00248 35 SLSDLDPEALLPLLAE---D--RPDILLIGTGAEIAFLPRALRAAL-RAAGI----GVEVMSTGAACRTY 94 (109)
T ss_pred CcccCCHHHHHHHHhh---C--CCCEEEEcCCCCCCcCCHHHHHHH-HHcCC----eEEEeCcHHHHHHH
Confidence 3445665666666553 1 488999998543333222 22233 34566 67888888999876
No 266
>PRK06059 lipid-transfer protein; Provisional
Probab=27.80 E-value=73 Score=31.65 Aligned_cols=40 Identities=8% Similarity=-0.013 Sum_probs=34.5
Q ss_pred HHHHHHHHHHhhchhCCCCCccccceecccCCchHHHHHHHHHhhh
Q 018515 218 DTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLF 263 (354)
Q Consensus 218 ~~~i~~~l~~~g~~~~~~l~~~Did~~v~HQan~~ii~~~~~~l~~ 263 (354)
..+.+++++++| ++++|||.+=+|-+..-+.-...+.||+
T Consensus 276 ~~a~~~a~~~ag------l~~~Did~~El~d~f~~~~l~~~e~lGl 315 (399)
T PRK06059 276 DQILDAAYAEAG------IGPEDLSLAEVYDLSTALELDWYEHLGL 315 (399)
T ss_pred HHHHHHHHHHcC------CCHHHCcEEeecccChHHHHHHHHHcCC
Confidence 467888999999 9999999999999987777777788886
No 267
>TIGR03723 bact_gcp putative glycoprotease GCP. This model represents bacterial members of a protein family that is widely distributed. In a few pathogenic species, the protein is exported in a way that may represent an exceptional secondary function. This model plus companion (archaeal) model TIGR03722 together span the prokaryotic member sequences of TIGR00329, a protein family that appears universal in life, and whose broad function is unknown. A member of TIGR03722 has been characterized as a DNA-binding protein with apurinic endopeptidase activity. In contrast, the rare characterized members of the present family show O-sialoglycoprotein endopeptidase (EC. 3.4.24.57) activity after export. These include glycoprotease (gcp) from Pasteurella haemolytica A1 and a cohemolysin from Riemerella anatipestifer (GB|AAG39646.1). The member from Staphylococcus aureus is essential and is related to cell wall dynamics and the modulation of autolysis, but members are also found in the Mycoplasmas
Probab=27.65 E-value=79 Score=30.46 Aligned_cols=30 Identities=10% Similarity=0.137 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHcCCCcCCccEEEEeec
Q 018515 54 ISMSLTAVTNLLEKYKIDPKQIGRLEVGSE 83 (354)
Q Consensus 54 ~~La~~Aa~~aL~~agi~~~dId~lI~aT~ 83 (354)
++.-....+++|+++|++++|||.|.++..
T Consensus 50 ~~~l~~~i~~~l~~~~~~~~~id~iav~~G 79 (314)
T TIGR03723 50 LEAIPPLIEEALAEAGLTLSDIDAIAVTAG 79 (314)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecC
Confidence 456667889999999999999999999864
No 268
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=26.55 E-value=75 Score=30.73 Aligned_cols=32 Identities=25% Similarity=0.200 Sum_probs=22.2
Q ss_pred ccccCccchHHHHHHHHHHhcc-Cchhhhhhhc
Q 018515 321 PKQVGNMYTASLYAALASLIHN-KHSELVIAFT 352 (354)
Q Consensus 321 ~~~~GN~~saSip~~L~~~l~~-~~~~~~~~~~ 352 (354)
+.-||-.||-.--++|+.++-. +..+.+++.|
T Consensus 100 ~GlygACST~~e~l~laa~~vdgg~a~~vla~t 132 (329)
T PF07451_consen 100 LGLYGACSTMMESLALAAMLVDGGFADYVLAAT 132 (329)
T ss_dssp EEB--CCCHHHHHHHHHHHHHHTTS-SEEEEEE
T ss_pred cchhhHHHHHHHHHHHHHHHHhCCCcceEEEEe
Confidence 4689999999999999987654 6666666654
No 269
>cd01453 vWA_transcription_factor_IIH_type Transcription factors IIH type: TFIIH is a multiprotein complex that is one of the five general transcription factors that binds RNA polymerase II holoenzyme. Orthologues of these genes are found in all completed eukaryotic genomes and all these proteins contain a VWA domain. The p44 subunit of TFIIH functions as a DNA helicase in RNA polymerase II transcription initiation and DNA repair, and its transcriptional activity is dependent on its C-terminal Zn-binding domains. The function of the vWA domain is unclear, but may be involved in complex assembly. The MIDAS motif is not conserved in this sub-group.
Probab=26.15 E-value=2.9e+02 Score=24.10 Aligned_cols=89 Identities=10% Similarity=0.092 Sum_probs=50.0
Q ss_pred CHHHHHHHHHHHHHHHc--CCCcCCccEEEEeeccCCCCCCcHHH--HHHHHhcCCCCCCeeEEeecCcChHHHHHHHHH
Q 018515 52 DVISMSLTAVTNLLEKY--KIDPKQIGRLEVGSETVIDKSKSIKT--FLMQIFEKFGNTDIEGVDSTNACYGGTAALFNC 127 (354)
Q Consensus 52 ~~~~La~~Aa~~aL~~a--gi~~~dId~lI~aT~t~~~~~p~~a~--~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A 127 (354)
+-.+-+..++++.+++. .-.-+.|.+|++...++....|.+.- .+...|.- . + ...|-...-.||..|
T Consensus 24 tRl~~ak~~~~~fi~~~~~~~~~~~vglv~f~~~~a~~~~PlT~D~~~~~~~L~~-----~--~-~~~G~t~l~~aL~~A 95 (183)
T cd01453 24 SRLAVVLKLLELFIEEFFDQNPISQLGIISIKNGRAEKLTDLTGNPRKHIQALKT-----A--R-ECSGEPSLQNGLEMA 95 (183)
T ss_pred hHHHHHHHHHHHHHHHHhhcCccccEEEEEEcCCccEEEECCCCCHHHHHHHhhc-----c--c-CCCCchhHHHHHHHH
Confidence 34556667777666642 12335699999943333333443322 23334321 1 1 123446888999999
Q ss_pred HHHHHcC-CCCCCEEEEEeecc
Q 018515 128 VNWVESS-SWDGRYGLVVCTDS 148 (354)
Q Consensus 128 ~~~i~sg-~~~~~~vLVV~~e~ 148 (354)
..+++.. ....+++||+.+|.
T Consensus 96 ~~~l~~~~~~~~~~iiil~sd~ 117 (183)
T cd01453 96 LESLKHMPSHGSREVLIIFSSL 117 (183)
T ss_pred HHHHhcCCccCceEEEEEEcCC
Confidence 9999752 11135688887765
No 270
>PRK12342 hypothetical protein; Provisional
Probab=25.48 E-value=2.1e+02 Score=26.85 Aligned_cols=28 Identities=11% Similarity=0.081 Sum_probs=25.5
Q ss_pred ccEEEEeeccCCCCCCcHHHHHHHHhcC
Q 018515 75 IGRLEVGSETVIDKSKSIKTFLMQIFEK 102 (354)
Q Consensus 75 Id~lI~aT~t~~~~~p~~a~~v~~~LGl 102 (354)
.|+|+++..|.|...-.+..+++..||+
T Consensus 110 ~DLVl~G~~s~D~~tgqvg~~lA~~Lg~ 137 (254)
T PRK12342 110 FDLLLFGEGSGDLYAQQVGLLLGELLQL 137 (254)
T ss_pred CCEEEEcCCcccCCCCCHHHHHHHHhCC
Confidence 8999999999888777799999999999
No 271
>COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases [Posttranslational modification, protein turnover, chaperones]
Probab=25.36 E-value=76 Score=31.36 Aligned_cols=68 Identities=16% Similarity=0.196 Sum_probs=46.5
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCc---------HHHHHHHHhcCCCCCCeeEEeecCcChH
Q 018515 52 DVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKS---------IKTFLMQIFEKFGNTDIEGVDSTNACYG 119 (354)
Q Consensus 52 ~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~---------~a~~v~~~LGl~g~~~~~a~Di~~aC~g 119 (354)
....+-++|++.+|++.++.++||+.|.+.-+|-.+..|. ....|+.+.|+.--.+..+=||-.+--|
T Consensus 70 ~l~~~~a~av~~ll~~~~l~~~~i~~iG~HGQTV~H~p~~~~~~t~Qlgd~~~iA~~TGi~~v~dfR~~D~a~GGqG 146 (371)
T COG2377 70 ALALLHAQAVAALLAEQGLLPRDIRAIGCHGQTVLHRPPGHAPDTVQLGDGPLIAELTGITVVGDFRRRDMAAGGQG 146 (371)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHhCceeecCCccccCCCCCCCCceeecCchHHHHHHhCCccHhhhcccccccCCCC
Confidence 4455778899999999999999999888887775554333 3568999999811012234466444333
No 272
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional
Probab=25.28 E-value=73 Score=31.32 Aligned_cols=28 Identities=29% Similarity=0.310 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHcCCCcCCccEEEEeec
Q 018515 56 MSLTAVTNLLEKYKIDPKQIGRLEVGSE 83 (354)
Q Consensus 56 La~~Aa~~aL~~agi~~~dId~lI~aT~ 83 (354)
--....+++|+++|++++|||.|.+...
T Consensus 52 ~l~~~i~~~l~~a~~~~~did~Iavt~G 79 (345)
T PTZ00340 52 HILSLVKEALEEAKITPSDISLICYTKG 79 (345)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEecC
Confidence 4446788999999999999999988753
No 273
>cd01452 VWA_26S_proteasome_subunit 26S proteasome plays a major role in eukaryotic protein breakdown, especially for ubiquitin-tagged proteins. It is an ATP-dependent protease responsible for the bulk of non-lysosomal proteolysis in eukaryotes, often using covalent modification of proteins by ubiquitylation. It consists of a 20S proteolytic core particle (CP) and a 19S regulatory particle (RP). The CP is an ATP independent peptidase consisting of hydrolyzing activities. One or both ends of CP carry the RP that confers both ubiquitin and ATP dependence to the 26S proteosome. The RP's proposed functions include recognition of substrates and translocation of these to CP for proteolysis. The RP can dissociate into a stable lid and base subcomplexes. The base is composed of three non-ATPase subunits (Rpn 1, 2 and 10). A single residue in the vWA domain of Rpn10 has been implicated to be responsible for stabilizing the lid-base association.
Probab=24.79 E-value=1.8e+02 Score=25.84 Aligned_cols=86 Identities=6% Similarity=-0.081 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHH----HHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHH
Q 018515 54 ISMSLTAVTNLL----EKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVN 129 (354)
Q Consensus 54 ~~La~~Aa~~aL----~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~ 129 (354)
.+.+.+++...+ ++ ...+.|++|.++...+.-..|.|..+-.-...+ ..+ +.. |=..+..||.+|..
T Consensus 26 L~aak~~i~~~~~~f~~~--np~~~vGlv~fag~~a~v~~plT~D~~~~~~~L---~~i---~~~-g~~~l~~AL~~A~~ 96 (187)
T cd01452 26 FQAQADAVNLICQAKTRS--NPENNVGLMTMAGNSPEVLVTLTNDQGKILSKL---HDV---QPK-GKANFITGIQIAQL 96 (187)
T ss_pred HHHHHHHHHHHHHHHHhc--CCCccEEEEEecCCceEEEECCCCCHHHHHHHH---HhC---CCC-CcchHHHHHHHHHH
Confidence 445555665553 33 234579999999745444455543332222223 111 112 44578899999999
Q ss_pred HHHcCCC--CCCE-EEEEeecc
Q 018515 130 WVESSSW--DGRY-GLVVCTDS 148 (354)
Q Consensus 130 ~i~sg~~--~~~~-vLVV~~e~ 148 (354)
.++.... ..++ +++++++.
T Consensus 97 ~L~~~~~~~~~~rivi~v~S~~ 118 (187)
T cd01452 97 ALKHRQNKNQKQRIVAFVGSPI 118 (187)
T ss_pred HHhcCCCcCCcceEEEEEecCC
Confidence 9864411 1125 66667664
No 274
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=24.74 E-value=1.1e+02 Score=28.50 Aligned_cols=32 Identities=6% Similarity=-0.071 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHHhhchhCCCCCccccceecccCCc
Q 018515 213 YLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPY 250 (354)
Q Consensus 213 ~~~~~~~~i~~~l~~~g~~~~~~l~~~Did~~v~HQan 250 (354)
..+....+++++|++.+ +++++||.+++=+..
T Consensus 26 ~~~L~~~a~~~al~~~~------i~~~~Id~v~~G~~~ 57 (264)
T PF00108_consen 26 PEDLAAEAVKAALERAG------IDPEDIDAVIVGNVL 57 (264)
T ss_dssp HHHHHHHHHHHHHHHHT------SHGGGEEEEEEE-SS
T ss_pred HHHHHHHHHHHHHHhcc------cchhhhhhcCccccc
Confidence 44566788999999999 999999999885433
No 275
>PTZ00186 heat shock 70 kDa precursor protein; Provisional
Probab=24.71 E-value=1.2e+02 Score=32.60 Aligned_cols=45 Identities=11% Similarity=0.206 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcC
Q 018515 56 MSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK 102 (354)
Q Consensus 56 La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl 102 (354)
=....++++|+++|+++++||.|+++-.+ -.+|.+-..|.+.+|.
T Consensus 335 r~~~~v~~~L~~a~~~~~dId~VvLVGGs--sriP~V~~~l~~~fg~ 379 (657)
T PTZ00186 335 RSIAPCKQCMKDAGVELKEINDVVLVGGM--TRMPKVVEEVKKFFQK 379 (657)
T ss_pred HHHHHHHHHHHHcCCChhhCCEEEEECCc--ccChHHHHHHHHHhCC
Confidence 34566888999999999999999977543 4579999999999986
No 276
>COG3737 Uncharacterized conserved protein [Function unknown]
Probab=24.17 E-value=1.5e+02 Score=24.51 Aligned_cols=63 Identities=10% Similarity=0.084 Sum_probs=41.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCc--HHHHHHHHhcCCCCCCeeEEeecCcChHHHHHH
Q 018515 52 DVISMSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKS--IKTFLMQIFEKFGNTDIEGVDSTNACYGGTAAL 124 (354)
Q Consensus 52 ~~~~La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~--~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL 124 (354)
+.++|..+.-++.|+.+ .+|..||++|.......|. .|... +-|+ ++.+++.+.+|..+-.=+
T Consensus 51 ~~~~Lt~e~f~~vl~~a----~~~EilliGTG~~~rf~p~~l~aal~--~~gI----sve~Mst~AA~RTYNvL~ 115 (127)
T COG3737 51 TLSDLTPEDFERVLAEA----PDVEILLIGTGARLRFPPPKLRAALK--AAGI----SVEPMSTGAAVRTYNVLL 115 (127)
T ss_pred ChhhCCHHHHHHHHhcC----CCceEEEEecCccccCCCHHHHHHHH--HcCC----ccccccchhhHHHHHHHH
Confidence 56788888888988866 4899999998765444343 23333 2344 344566677777765433
No 277
>PRK11867 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Reviewed
Probab=23.92 E-value=2e+02 Score=27.42 Aligned_cols=20 Identities=25% Similarity=0.483 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHcCCCcCCc
Q 018515 56 MSLTAVTNLLEKYKIDPKQI 75 (354)
Q Consensus 56 La~~Aa~~aL~~agi~~~dI 75 (354)
...++.+++|.+.|++|+|.
T Consensus 27 ~il~~l~~al~~l~~~p~d~ 46 (286)
T PRK11867 27 SILAALQRALAELGLDPENV 46 (286)
T ss_pred HHHHHHHHHHHHhCCCCCcE
Confidence 47789999999999999875
No 278
>COG3894 Uncharacterized metal-binding protein [General function prediction only]
Probab=23.86 E-value=68 Score=33.12 Aligned_cols=42 Identities=12% Similarity=0.162 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHhhchhCCCCCccccceecccCCchHHHH-HHHHHhhh
Q 018515 216 ALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQ-KSFARLLF 263 (354)
Q Consensus 216 ~~~~~i~~~l~~~g~~~~~~l~~~Did~~v~HQan~~ii~-~~~~~l~~ 263 (354)
++......+++++| +.++|++.+-+--+.+.-+. +-++++|+
T Consensus 475 AirAG~~tL~~kaG------ie~eDie~~ymAGAfGtyid~~~A~~iGl 517 (614)
T COG3894 475 AIRAGHMTLIEKAG------IELEDIERIYMAGAFGTYIDAKKAMVIGL 517 (614)
T ss_pred HHHHHHHHHHHHcC------CChhhhhheeeccccccccchhHhheeec
Confidence 34455667788888 99999999888877776443 44556663
No 279
>cd05569 PTS_IIB_fructose PTS_IIB_fructose: subunit IIB of enzyme II (EII) of the fructose-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In this system, EII (also referred to as FruAB) is a fructose-specific permease made up of two proteins (FruA and FruB) each containing 3 domains. The FruA protein contains two tandem nonidentical IIB domains and a C-terminal IIC transmembrane domain. Both IIB domains of FruA are included in this alignment. The FruB protein (also referred to as diphosphoryl transfer protein) contains a IIA domain, a domain of unknown function, and an Hpr-like domain called FPr (fructose-inducible HPr). This familiy also includes the IIB domains of several fructose-like PTS permeases including the Frv permease encoded by the frvABXR operon, the Frw permease encoded by the frwACBD operon, the Frx permease encoded by the hrsA gene, and the Fry permease encoded by the fryABC (ypdDGH) operon. FruAB takes up exogenous fructose, releasing the 1-p
Probab=23.39 E-value=1.5e+02 Score=23.06 Aligned_cols=38 Identities=8% Similarity=0.012 Sum_probs=28.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHcCCC-------------------cCCccEEEEeeccC
Q 018515 48 SEVEDVISMSLTAVTNLLEKYKID-------------------PKQIGRLEVGSETV 85 (354)
Q Consensus 48 ~~~e~~~~La~~Aa~~aL~~agi~-------------------~~dId~lI~aT~t~ 85 (354)
+.+...+.|+.++.++++++.|++ .++-|+||+++..+
T Consensus 8 ~~G~a~s~laa~~L~~aa~~~g~~~~ve~~~~~g~~~~l~~~~i~~Ad~vi~~~~~~ 64 (96)
T cd05569 8 PTGIAHTYMAAEALEKAAKKLGWEIKVETQGSLGIENELTAEDIAEADAVILAADVP 64 (96)
T ss_pred CCchhHHHHHHHHHHHHHHHCCCeEEEEEecCcCccCcCCHHHHhhCCEEEEecCCC
Confidence 445667889999999999999963 34567777776543
No 280
>TIGR01796 CM_mono_aroH monofunctional chorismate mutase, gram positive type, clade 1. This model represents a family of monofunctional (non-fused) chorismate mutases from gram positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus).
Probab=23.37 E-value=1.6e+02 Score=24.20 Aligned_cols=47 Identities=15% Similarity=0.114 Sum_probs=30.8
Q ss_pred HHHHHHHcCCCcCCccEEEEeeccCCCC--CCcHHHHHHHHh-cCCCCCCeeEEeec
Q 018515 61 VTNLLEKYKIDPKQIGRLEVGSETVIDK--SKSIKTFLMQIF-EKFGNTDIEGVDST 114 (354)
Q Consensus 61 a~~aL~~agi~~~dId~lI~aT~t~~~~--~p~~a~~v~~~L-Gl~g~~~~~a~Di~ 114 (354)
....+++.+++++||-.|+|.. |+|-. .|..+ ++++ |. .+++-++.+
T Consensus 26 l~~ii~~N~l~~edivSv~FT~-T~DL~a~FPA~a---aR~~~Gw---~~Vplmc~q 75 (117)
T TIGR01796 26 LTELMERNELTPEDLISVIFTV-TEDLHADFPAAA---ARGLPGW---TDVPVMCAQ 75 (117)
T ss_pred HHHHHHHcCCCHHHEEEEEEEe-cCcccccChHHH---HHhccCC---CCcceeccC
Confidence 3455678899999999999875 44432 34433 4455 87 567666543
No 281
>PLN03172 chalcone synthase family protein; Provisional
Probab=22.62 E-value=1.5e+02 Score=29.54 Aligned_cols=41 Identities=10% Similarity=-0.085 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHhhchhCCCCCccccceecccC----CchHHHHHHHHHhhh
Q 018515 217 LDTCYKCLCSKYEKLEGKQFSLSNADYFVFHS----PYNKLVQKSFARLLF 263 (354)
Q Consensus 217 ~~~~i~~~l~~~g~~~~~~l~~~Did~~v~HQ----an~~ii~~~~~~l~~ 263 (354)
..++.+++|++++ ++++|||++|+.. ..+.+--.++++||+
T Consensus 106 a~~Aa~~aL~~ag------~~~~dId~ii~~t~t~~~~P~~a~~l~~~LGl 150 (393)
T PLN03172 106 GKEAAAKAIKEWG------QPKSKITHLVFCTTSGVDMPGADYQLTKLLGL 150 (393)
T ss_pred HHHHHHHHHHHcC------CCHHHCCEEEEEccCCCcCchHHHHHHHHhCC
Confidence 3467788888888 9999999987432 344455567888886
No 282
>PLN02377 3-ketoacyl-CoA synthase
Probab=22.49 E-value=1.3e+02 Score=31.25 Aligned_cols=42 Identities=10% Similarity=0.120 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHhhchhCCCCCccccceeccc----CCchHHHHHHHHHhhhh
Q 018515 217 LDTCYKCLCSKYEKLEGKQFSLSNADYFVFH----SPYNKLVQKSFARLLFN 264 (354)
Q Consensus 217 ~~~~i~~~l~~~g~~~~~~l~~~Did~~v~H----Qan~~ii~~~~~~l~~~ 264 (354)
+-.+++++++++| ++++|||++|.. ++.+-+--.++++||++
T Consensus 176 ~~~A~~~aL~kaG------i~p~dID~LVv~cS~~~~~PSlaa~V~~~LGlr 221 (502)
T PLN02377 176 MFGALDNLFANTN------VNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLR 221 (502)
T ss_pred HHHHHHHHHHHcC------CCHHHCCEEEEECCCCCCCCcHHHHHHHHhCCC
Confidence 3467788888888 999999999982 23444556678888874
No 283
>PF14804 Jag_N: Jag N-terminus; PDB: 3GKU_B.
Probab=21.68 E-value=83 Score=21.92 Aligned_cols=32 Identities=6% Similarity=0.089 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHhhchhCCCCCccccceecccCCchHHH
Q 018515 217 LDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLV 254 (354)
Q Consensus 217 ~~~~i~~~l~~~g~~~~~~l~~~Did~~v~HQan~~ii 254 (354)
+.++++..++..+ ++.+++++=|..+++..++
T Consensus 7 ~eeAi~~A~~~l~------~~~~~~~~eVi~~g~kGf~ 38 (52)
T PF14804_consen 7 VEEAIEKALKELG------VPREELEYEVIEEGKKGFF 38 (52)
T ss_dssp HHHHHHHHHHHTT--------GGGEEEEEEE--B----
T ss_pred HHHHHHHHHHHhC------CChHHEEEEEEEcCCCcEE
Confidence 4577888888888 9999999999999886654
No 284
>PF07736 CM_1: Chorismate mutase type I; InterPro: IPR008243 Chorismate mutase (CM; 5.4.99.5 from EC) catalyses the reaction at the branch point of the biosynthetic pathway leading to the three aromatic amino acids, phenylalanine, tryptophan and tyrosine (chorismic acid is the last common intermediate, and CM leads to the L-phenylalanine/L-tyrosine branch). It is part of the shikimate pathway, which is present only in bacteria, fungi and plants. This entry represents a family of monofunctional (non-fused) chorismate mutases from Gram-positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus). They are monofunctional, homotrimeric, nonallosteric enzymes and are not regulated by the end-product aromatic amino acids. The three types of CM are AroQ class, Prokaryotic type (e.g., IPR008239 from INTERPRO amongst others); AroQ class, Eukaryotic type (IPR008238 from INTERPRO); and AroH class. They fall into two structural folds (AroQ class and AroH class) which are completely unrelated []. The two types of the AroQ structural class (the Escherichia coli CM dimer and the yeast CM monomer) can be structurally superimposed, and the topology of the four-helix bundle forming the active site is conserved []. For additional information please see [, , , , , , ].; PDB: 2CHS_K 2CHT_L 1COM_J 1FNJ_A 1FNK_A 1DBF_C 1UI9_A 1ODE_A 1UFY_A 1XHO_C ....
Probab=21.57 E-value=1.8e+02 Score=23.97 Aligned_cols=47 Identities=13% Similarity=0.113 Sum_probs=28.9
Q ss_pred HHHHHHHcCCCcCCccEEEEeeccCCC--CCCcHHHHHHHHh-cCCCCCCeeEEeec
Q 018515 61 VTNLLEKYKIDPKQIGRLEVGSETVID--KSKSIKTFLMQIF-EKFGNTDIEGVDST 114 (354)
Q Consensus 61 a~~aL~~agi~~~dId~lI~aT~t~~~--~~p~~a~~v~~~L-Gl~g~~~~~a~Di~ 114 (354)
.++.+++.+++++||-.|+|.. |+|- ..|+.|. +++ |. ..++-|+.+
T Consensus 26 l~~i~~~N~l~~~dIvSi~FT~-T~DL~a~fPA~a~---R~~~g~---~~Vpl~c~~ 75 (118)
T PF07736_consen 26 LEEILERNELSPEDIVSIIFTV-TPDLDAAFPAAAA---RELPGW---DDVPLMCAQ 75 (118)
T ss_dssp HHHHHHHTT--GGGEEEEEEEE--TT--SS-TCHHH---HHTTTG---TTSEEEEEE
T ss_pred HHHHHHHcCCCHHHEEEEEEEe-CCCcCccChHHHH---HccCCC---CccceeccC
Confidence 4455678899999999999875 5553 2366553 455 76 577777654
No 285
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=20.93 E-value=5.7e+02 Score=22.69 Aligned_cols=28 Identities=7% Similarity=0.252 Sum_probs=14.9
Q ss_pred ccEEEEeeccCCCCCCcHHHHHHHHhcC
Q 018515 75 IGRLEVGSETVIDKSKSIKTFLMQIFEK 102 (354)
Q Consensus 75 Id~lI~aT~t~~~~~p~~a~~v~~~LGl 102 (354)
.|+|++++++.+.....++.+++.+||.
T Consensus 109 p~lVL~~~t~~~~~grdlaprlAarLga 136 (202)
T cd01714 109 VDLILTGKQSIDGDTGQVGPLLAELLGW 136 (202)
T ss_pred CCEEEEcCCcccCCcCcHHHHHHHHhCC
Confidence 3555555544222234566666666665
No 286
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=20.51 E-value=2.2e+02 Score=22.32 Aligned_cols=73 Identities=12% Similarity=0.140 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcCCCCCCeeEEeecCcChHHHHHHHHHHHHHHcCC
Q 018515 56 MSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGNTDIEGVDSTNACYGGTAALFNCVNWVESSS 135 (354)
Q Consensus 56 La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~~~~~a~Di~~aC~g~~~aL~~A~~~i~sg~ 135 (354)
=|.++.++ |++.| +. +++.|.++.......+..+ ..+|+ + ++-..-++++. .+..+++...
T Consensus 18 ga~e~l~~-L~~~g-----~~-~~~lTNns~~s~~~~~~~L-~~~Gi--~-----~~~~~i~ts~~----~~~~~l~~~~ 78 (101)
T PF13344_consen 18 GAVEALDA-LRERG-----KP-VVFLTNNSSRSREEYAKKL-KKLGI--P-----VDEDEIITSGM----AAAEYLKEHK 78 (101)
T ss_dssp THHHHHHH-HHHTT-----SE-EEEEES-SSS-HHHHHHHH-HHTTT--T-------GGGEEEHHH----HHHHHHHHHT
T ss_pred CHHHHHHH-HHHcC-----CC-EEEEeCCCCCCHHHHHHHH-HhcCc--C-----CCcCEEEChHH----HHHHHHHhcC
Confidence 34455544 45555 34 4455544333222345555 56888 2 22344444443 4445555521
Q ss_pred CCCCEEEEEeecc
Q 018515 136 WDGRYGLVVCTDS 148 (354)
Q Consensus 136 ~~~~~vLVV~~e~ 148 (354)
+.++|+|++.+.
T Consensus 79 -~~~~v~vlG~~~ 90 (101)
T PF13344_consen 79 -GGKKVYVLGSDG 90 (101)
T ss_dssp -TSSEEEEES-HH
T ss_pred -CCCEEEEEcCHH
Confidence 459999999875
No 287
>PLN02854 3-ketoacyl-CoA synthase
Probab=20.50 E-value=4.7e+02 Score=27.25 Aligned_cols=81 Identities=11% Similarity=0.005 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHcCCCc------CCccEEEEeeccCCCCCCcHHHHHHHHhcCCCC-CC--eeEEe-e-cCcChHHHHHHH
Q 018515 57 SLTAVTNLLEKYKIDP------KQIGRLEVGSETVIDKSKSIKTFLMQIFEKFGN-TD--IEGVD-S-TNACYGGTAALF 125 (354)
Q Consensus 57 a~~Aa~~aL~~agi~~------~dId~lI~aT~t~~~~~p~~a~~v~~~LGl~g~-~~--~~a~D-i-~~aC~g~~~aL~ 125 (354)
+...+++.|.++|+.+ .+||.++.... -..+=-.+++.||+... .+ ...++ . |.+.++-.++|.
T Consensus 387 ~~~~i~~~L~~~gl~~~~pd~~~didhf~iHqg-----gr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSASI~~~L~ 461 (521)
T PLN02854 387 FVTLVRRKLLKAKVKPYIPDFKLAFEHFCIHAG-----GRAVLDELQKNLQLSDWHMEPSRMTLHRFGNTSSSSLWYELA 461 (521)
T ss_pred HHHHHHHHHHHcCCCccCCcccccCcEEEECCC-----CHHHHHHHHHHcCCCcccccchHHHhhhcCChHhhHHHHHHH
Confidence 5667888899999987 68988776521 13344578999999210 11 11222 3 346666667776
Q ss_pred HHHHHHHcCCC-CCCEEEEEe
Q 018515 126 NCVNWVESSSW-DGRYGLVVC 145 (354)
Q Consensus 126 ~A~~~i~sg~~-~~~~vLVV~ 145 (354)
.+. +.|.. ++++++.++
T Consensus 462 ~~~---~kGrik~GD~Vl~ia 479 (521)
T PLN02854 462 YTE---AKGRVSAGDRVWQIA 479 (521)
T ss_pred HHH---HcCCCCCCCEEEEEE
Confidence 553 44422 346677665
No 288
>PRK13411 molecular chaperone DnaK; Provisional
Probab=20.46 E-value=1.4e+02 Score=31.79 Aligned_cols=45 Identities=11% Similarity=0.304 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHcCCCcCCccEEEEeeccCCCCCCcHHHHHHHHhcC
Q 018515 56 MSLTAVTNLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEK 102 (354)
Q Consensus 56 La~~Aa~~aL~~agi~~~dId~lI~aT~t~~~~~p~~a~~v~~~LGl 102 (354)
=..+.++++|+++|+.+++||.|+++-.+ -.+|.+-..|.+.+|-
T Consensus 309 ~~~~~i~~~L~~a~~~~~~id~ViLvGGs--sriP~v~~~l~~~f~~ 353 (653)
T PRK13411 309 ATIEPMQQALKDAGLKPEDIDRVILVGGS--TRIPAVQEAIQKFFGG 353 (653)
T ss_pred HHHHHHHHHHHHcCCCHHHCcEEEEECCC--CCcchHHHHHHHHcCC
Confidence 35567889999999999999999977533 4579999999999874
No 289
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=20.30 E-value=2.3e+02 Score=35.61 Aligned_cols=78 Identities=17% Similarity=0.164 Sum_probs=48.2
Q ss_pred HHHHHHHHHHcCCCcCCccEEE-EeeccCCCCCCcHHHHHHHHhcCCC--CCCeeEEe----ecC-cChHHHHHHHHHHH
Q 018515 58 LTAVTNLLEKYKIDPKQIGRLE-VGSETVIDKSKSIKTFLMQIFEKFG--NTDIEGVD----STN-ACYGGTAALFNCVN 129 (354)
Q Consensus 58 ~~Aa~~aL~~agi~~~dId~lI-~aT~t~~~~~p~~a~~v~~~LGl~g--~~~~~a~D----i~~-aC~g~~~aL~~A~~ 129 (354)
.++.++||+++|++|++||+|- ++|.|+.- -|.=..-|.+.+|-.. ...+..-. |++ -+++++.+|.-+..
T Consensus 318 ~~~i~~Al~~Agi~p~~I~yIeaHGTGT~~g-D~~E~~Al~~vf~~~~~~~~~~~vgSvKs~iGH~~~AAG~a~lik~~l 396 (2582)
T TIGR02813 318 AKALKRAYDDAGFAPHTCGLIEAHGTGTAAG-DVAEFGGLVSVFSQDNDQKQHIALGSVKSQIGHTKSTAGTAGMIKAVL 396 (2582)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecCCCCCCC-CHHHHHHHHHHhcccccCCCCceeeccccccccchHhHHHHHHHHHHH
Confidence 6899999999999999999996 67666433 2333445556665311 11232222 332 45566666666666
Q ss_pred HHHcCCC
Q 018515 130 WVESSSW 136 (354)
Q Consensus 130 ~i~sg~~ 136 (354)
.++.|..
T Consensus 397 al~~~~i 403 (2582)
T TIGR02813 397 ALHHKVL 403 (2582)
T ss_pred HHhcCCc
Confidence 6677644
No 290
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=20.07 E-value=3.1e+02 Score=25.72 Aligned_cols=29 Identities=7% Similarity=0.061 Sum_probs=23.5
Q ss_pred CccEEEEeeccCCCCCCcHHHHHHHHhcC
Q 018515 74 QIGRLEVGSETVIDKSKSIKTFLMQIFEK 102 (354)
Q Consensus 74 dId~lI~aT~t~~~~~p~~a~~v~~~LGl 102 (354)
+.|+|+++..|.|...-.+..+++..||+
T Consensus 112 ~~DLVl~G~~s~D~~tgqvg~~lAe~Lg~ 140 (256)
T PRK03359 112 GFDLILCGDGSSDLYAQQVGLLVGEILNI 140 (256)
T ss_pred CCCEEEEcCccccCCCCcHHHHHHHHhCC
Confidence 37888888888777666788888888888
Done!