BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018518
(354 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P54873|HMCS_ARATH Hydroxymethylglutaryl-CoA synthase OS=Arabidopsis thaliana GN=HMGS
PE=1 SV=2
Length = 461
Score = 627 bits (1616), Expect = e-179, Method: Compositional matrix adjust.
Identities = 290/345 (84%), Positives = 315/345 (91%)
Query: 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVT 66
KNVGILA+DIYFPPTCV QEALE HDG SKGKYT+GLGQDC+AFC+E+EDVISMS VT
Sbjct: 3 KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQDCLAFCTELEDVISMSFNAVT 62
Query: 67 SLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTA 126
SL EKYKIDP QIGRLEVGSETVIDKSKSIKTFLMQ+FEK GNTD+EGVDSTNACYGGTA
Sbjct: 63 SLFEKYKIDPNQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDVEGVDSTNACYGGTA 122
Query: 127 ALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIGPDAPIAFESKLR 186
AL NCVNWVES SWDGRYGLV+CTDSAVYAEGPARPTGGAAA+AMLIGPDAPI FESKLR
Sbjct: 123 ALLNCVNWVESNSWDGRYGLVICTDSAVYAEGPARPTGGAAAIAMLIGPDAPIVFESKLR 182
Query: 187 GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVD 246
SHM+H YDFYKPNLASEYPVVDGKLSQTCYLMALDSCYK+ C KFEK+EG++FS+ D D
Sbjct: 183 ASHMAHVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNKFEKIEGKEFSINDAD 242
Query: 247 YFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKAS 306
Y VFHSPYNKLVQKSFARL +NDFLRNASS+DE AKEK PYS+L+ ESYQSRDLEK S
Sbjct: 243 YIVFHSPYNKLVQKSFARLLYNDFLRNASSIDEAAKEKFTPYSSLTLDESYQSRDLEKVS 302
Query: 307 QQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSL 351
QQ+AK YD KVQP+TLIPK+VGNMYTASLYAAFASL+H+KH+ L
Sbjct: 303 QQIAKPFYDAKVQPTTLIPKEVGNMYTASLYAAFASLIHKKHNDL 347
>sp|P54872|HMCSA_DICDI Hydroxymethylglutaryl-CoA synthase A OS=Dictyostelium discoideum
GN=hgsA PE=1 SV=2
Length = 482
Score = 413 bits (1062), Expect = e-115, Method: Compositional matrix adjust.
Identities = 194/347 (55%), Positives = 248/347 (71%), Gaps = 3/347 (0%)
Query: 6 PKNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVV 65
P+N+GI +++YFP T V QE LE DGVS+GKYT+GLGQ MAFC + ED+ S+SL V
Sbjct: 4 PENIGIHGIEVYFPSTYVAQEDLEKFDGVSQGKYTLGLGQTNMAFCGDREDIYSLSLNAV 63
Query: 66 TSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGT 125
+L++K+ +DP IGRLEVG+ETVIDKSKS+KT LM +F K+GNT I+G+D+ NACYGGT
Sbjct: 64 NNLMDKFNVDPNSIGRLEVGTETVIDKSKSVKTVLMDLFAKHGNTSIDGIDTINACYGGT 123
Query: 126 AALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIGPDAPIAFESKL 185
+AL N + W+ES+ WDGR +VV D AVY +GPARPTGGA VAMLIGP+API FES L
Sbjct: 124 SALHNALQWMESSYWDGRNAIVVAGDIAVYEKGPARPTGGAGVVAMLIGPNAPITFESGL 183
Query: 186 RGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDV 245
RG HM + YDFYKP++ SEYP VDGKLS +CY A+D+CY + + FEK G+ FS+ V
Sbjct: 184 RGVHMENVYDFYKPDMDSEYPRVDGKLSISCYFRAIDNCYNRYAKAFEKKYGKSFSLDQV 243
Query: 246 DYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKA 305
D+ +FHSPYNKLVQKSF R+ +NDFL N ++ L Y + ++Y LEKA
Sbjct: 244 DFALFHSPYNKLVQKSFGRMLYNDFLNNP---NDSRYASLEAYKNVKPEDTYFDSVLEKA 300
Query: 306 SQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLV 352
+ K Y KV P+TL+ KQ+GN Y S Y+ SLL EK + LV
Sbjct: 301 LSAITKNDYATKVAPTTLLAKQLGNTYCGSTYSGLLSLLDEKSNDLV 347
>sp|Q5R7Z9|HMCS1_PONAB Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Pongo abelii
GN=HMGCS1 PE=2 SV=1
Length = 520
Score = 402 bits (1032), Expect = e-111, Method: Compositional matrix adjust.
Identities = 193/354 (54%), Positives = 254/354 (71%), Gaps = 5/354 (1%)
Query: 6 PKNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVV 65
PK+VGI+AL+IYFP V Q LE +DGV+ GKYT+GLGQ M FC++ ED+ S+ +TVV
Sbjct: 14 PKDVGIVALEIYFPSQYVDQAELEKYDGVAAGKYTIGLGQAKMGFCTDREDINSLCMTVV 73
Query: 66 TSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGT 125
+L+E+ + IGRLEVG+ET+IDKSKS+KT LMQ+FE+ GNTDIEG+D+TNACYGGT
Sbjct: 74 QNLMERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDIEGIDTTNACYGGT 133
Query: 126 AALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIGPDAPIAFESKL 185
AA+FN VNW+ES+SWDGRY LVV D AVYA G ARPTGG AVA+LIGP+AP+ FE L
Sbjct: 134 AAVFNAVNWIESSSWDGRYALVVAGDIAVYATGNARPTGGVGAVALLIGPNAPLIFERGL 193
Query: 186 RGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFE---KLEG--RQF 240
RG+HM HAYDFYKP++ SEYP+VDGKLS CYL ALD CY +C+K + EG + F
Sbjct: 194 RGTHMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYCKKIRAQWQKEGNDKDF 253
Query: 241 SMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSR 300
++ D + +FHSPY KLVQKS AR+ NDFL + + L + + ++Y R
Sbjct: 254 TLNDFGFMIFHSPYCKLVQKSLARMLLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDR 313
Query: 301 DLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLVSG 354
D+EKA + + +L+ K + S L+ Q GNMYT+S+Y + AS+L + ++G
Sbjct: 314 DVEKAFMKASSELFSQKTKASLLVSNQNGNMYTSSVYGSLASVLAQYSPQQLAG 367
>sp|Q01581|HMCS1_HUMAN Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Homo sapiens
GN=HMGCS1 PE=1 SV=2
Length = 520
Score = 401 bits (1030), Expect = e-111, Method: Compositional matrix adjust.
Identities = 193/354 (54%), Positives = 253/354 (71%), Gaps = 5/354 (1%)
Query: 6 PKNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVV 65
PK+VGI+AL+IYFP V Q LE +DGV GKYT+GLGQ M FC++ ED+ S+ +TVV
Sbjct: 14 PKDVGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQAKMGFCTDREDINSLCMTVV 73
Query: 66 TSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGT 125
+L+E+ + IGRLEVG+ET+IDKSKS+KT LMQ+FE+ GNTDIEG+D+TNACYGGT
Sbjct: 74 QNLMERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDIEGIDTTNACYGGT 133
Query: 126 AALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIGPDAPIAFESKL 185
AA+FN VNW+ES+SWDGRY LVV D AVYA G ARPTGG AVA+LIGP+AP+ FE L
Sbjct: 134 AAVFNAVNWIESSSWDGRYALVVAGDIAVYATGNARPTGGVGAVALLIGPNAPLIFERGL 193
Query: 186 RGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFE---KLEG--RQF 240
RG+HM HAYDFYKP++ SEYP+VDGKLS CYL ALD CY +C+K + EG + F
Sbjct: 194 RGTHMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYCKKIHAQWQKEGNDKDF 253
Query: 241 SMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSR 300
++ D + +FHSPY KLVQKS AR+ NDFL + + L + + ++Y R
Sbjct: 254 TLNDFGFMIFHSPYCKLVQKSLARMLLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDR 313
Query: 301 DLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLVSG 354
D+EKA + + +L+ K + S L+ Q GNMYT+S+Y + AS+L + ++G
Sbjct: 314 DVEKAFMKASSELFSQKTKASLLVSNQNGNMYTSSVYGSLASVLAQYSPQQLAG 367
>sp|P23228|HMCS1_CHICK Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Gallus gallus
GN=HMGCS1 PE=1 SV=1
Length = 522
Score = 399 bits (1026), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/357 (56%), Positives = 252/357 (70%), Gaps = 10/357 (2%)
Query: 6 PKNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVV 65
PK+VGI+AL+IYFP V Q LE +DGV GKYT+GLGQ M FCS+ ED+ S+ LTVV
Sbjct: 14 PKDVGIVALEIYFPSQYVDQTELEKYDGVDAGKYTIGLGQSKMGFCSDREDINSLCLTVV 73
Query: 66 TSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGT 125
L+E+ + IGRLEVG+ET+IDKSKS+KT LMQ+FE+ GNTD+EG+D+TNACYGGT
Sbjct: 74 QKLMERNSLSYDCIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDVEGIDTTNACYGGT 133
Query: 126 AALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIGPDAPIAFESKL 185
AALFN +NW+ES+SWDGRY LVV D AVYA G ARPTGGA AVAML+G +AP+ FE L
Sbjct: 134 AALFNAINWIESSSWDGRYALVVAGDIAVYATGNARPTGGAGAVAMLVGSNAPLIFERGL 193
Query: 186 RGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFE---KLEG--RQF 240
RG+HM HAYDFYKP++ SEYPVVDGKLS CYL ALD CY + K + EG R F
Sbjct: 194 RGTHMQHAYDFYKPDMVSEYPVVDGKLSIQCYLSALDRCYSVYRNKIHAQWQKEGTDRGF 253
Query: 241 SMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDV---ESY 297
++ D + +FHSPY KLVQKS ARL NDFL + ++ E A + DV ++Y
Sbjct: 254 TLNDFGFMIFHSPYCKLVQKSVARLLLNDFLSDQNA--ETANGVFSGLEAFRDVKLEDTY 311
Query: 298 QSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLVSG 354
RD+EKA + + +L++ K + S L+ Q GNMYT S+Y ASLL + ++G
Sbjct: 312 FDRDVEKAFMKASAELFNQKTKASLLVSNQNGNMYTPSVYGCLASLLAQYSPEHLAG 368
>sp|Q8JZK9|HMCS1_MOUSE Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Mus musculus
GN=Hmgcs1 PE=1 SV=1
Length = 520
Score = 399 bits (1024), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/354 (54%), Positives = 254/354 (71%), Gaps = 5/354 (1%)
Query: 6 PKNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVV 65
PK+VGI+AL+IYFP V Q LE +DGV GKYT+GLGQ M FC++ ED+ S+ LTVV
Sbjct: 14 PKDVGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQARMGFCTDREDINSLCLTVV 73
Query: 66 TSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGT 125
L+E++ + IGRLEVG+ET+IDKSKS+K+ LMQ+FE+ GNTDIEG+D+TNACYGGT
Sbjct: 74 QKLMERHSLSYDCIGRLEVGTETIIDKSKSVKSNLMQLFEESGNTDIEGIDTTNACYGGT 133
Query: 126 AALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIGPDAPIAFESKL 185
AA+FN VNWVES+SWDGRY LVV D A+YA G ARPTGG AVA+LIGP+AP+ F+ L
Sbjct: 134 AAVFNAVNWVESSSWDGRYALVVAGDIAIYATGNARPTGGVGAVALLIGPNAPLIFDRGL 193
Query: 186 RGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFE---KLEG--RQF 240
RG+HM HAYDFYKP++ SEYPVVDGKLS CYL ALD CY + +K + EG + F
Sbjct: 194 RGTHMQHAYDFYKPDMLSEYPVVDGKLSIQCYLSALDRCYSVYRKKIRAQWQKEGKDKDF 253
Query: 241 SMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSR 300
++ D + +FHSPY KLVQKS AR+F NDFL + + L + + ++Y R
Sbjct: 254 TLNDFGFMIFHSPYCKLVQKSLARMFLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDR 313
Query: 301 DLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLVSG 354
D+EKA + + +L++ K + S L+ Q GNMYT+S+Y + AS+L + ++G
Sbjct: 314 DVEKAFMKASSELFNQKTKASLLVSNQNGNMYTSSVYGSLASVLAQYSPQQLAG 367
>sp|P17425|HMCS1_RAT Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Rattus
norvegicus GN=Hmgcs1 PE=1 SV=1
Length = 520
Score = 397 bits (1020), Expect = e-110, Method: Compositional matrix adjust.
Identities = 192/354 (54%), Positives = 253/354 (71%), Gaps = 5/354 (1%)
Query: 6 PKNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVV 65
PK+VGI+AL+IYFP V Q LE +DGV GKYT+GLGQ M FC++ ED+ S+ LTVV
Sbjct: 14 PKDVGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQARMGFCTDREDINSLCLTVV 73
Query: 66 TSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGT 125
L+E+ + IGRLEVG+ET+IDKSKS+K+ LMQ+FE+ GNTDIEG+D+TNACYGGT
Sbjct: 74 QKLMERNSLSYDCIGRLEVGTETIIDKSKSVKSNLMQLFEESGNTDIEGIDTTNACYGGT 133
Query: 126 AALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIGPDAPIAFESKL 185
AA+FN VNW+ES+SWDGRY LVV D A+YA G ARPTGG AVA+LIGP+AP+ F+ L
Sbjct: 134 AAVFNAVNWIESSSWDGRYALVVAGDIAIYASGNARPTGGVGAVALLIGPNAPVIFDRGL 193
Query: 186 RGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFE---KLEG--RQF 240
RG+HM HAYDFYKP++ SEYPVVDGKLS CYL ALD CY + +K + EG + F
Sbjct: 194 RGTHMQHAYDFYKPDMLSEYPVVDGKLSIQCYLSALDRCYSVYRKKIRAQWQKEGKDKDF 253
Query: 241 SMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSR 300
++ D + +FHSPY KLVQKS AR+F NDFL + + L + + ++Y R
Sbjct: 254 TLNDFGFMIFHSPYCKLVQKSLARMFLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDR 313
Query: 301 DLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLVSG 354
D+EKA + + +L++ K + S L+ Q GNMYT+S+Y + AS+L + ++G
Sbjct: 314 DVEKAFMKASAELFNQKTKASLLVSNQNGNMYTSSVYGSLASVLAQYSPQQLAG 367
>sp|P54961|HMCS1_BLAGE Hydroxymethylglutaryl-CoA synthase 1 OS=Blattella germanica
GN=HMGCS-1 PE=2 SV=1
Length = 453
Score = 397 bits (1019), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/355 (54%), Positives = 255/355 (71%), Gaps = 14/355 (3%)
Query: 6 PKNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVV 65
P +VGI+AL++ FP V Q LEV+D VS GKYTVGLGQ M FC++ ED+ S+ LTVV
Sbjct: 3 PSDVGIVALELIFPSQYVDQVDLEVYDNVSAGKYTVGLGQARMGFCTDREDINSLCLTVV 62
Query: 66 TSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGT 125
+ L+E++ I +QIGRLEVG+ET++DKSKS+KT LMQ+F+ NTDIEGVD+ NACYGGT
Sbjct: 63 SRLMERWSIPYSQIGRLEVGTETLLDKSKSVKTVLMQLFKD--NTDIEGVDTVNACYGGT 120
Query: 126 AALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIGPDAPIAFESKL 185
+ALFN ++WVES+SWDGRY LVV D AVYA+G ARPTGGA AVAML+G +AP+ F+ +
Sbjct: 121 SALFNAISWVESSSWDGRYALVVAGDIAVYAKGSARPTGGAGAVAMLVGANAPLVFDRGV 180
Query: 186 RGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDV 245
R SHM HAYDFYKP+L+S YP VDGKLS CYL ALD CY+ +C K +K G +F + +
Sbjct: 181 RSSHMQHAYDFYKPDLSSLYPTVDGKLSIQCYLSALDHCYQLYCSKIQKQLGEKFDIERL 240
Query: 246 DYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDV------ESYQS 299
D +FH+PY KLVQKS ARL NDF+R + +E+ YS+L + ++Y
Sbjct: 241 DAVLFHAPYCKLVQKSLARLVLNDFVRASE------EERTTKYSSLEALKGVKLEDTYFD 294
Query: 300 RDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLVSG 354
R++EKA +K +++ K +PS L+ QVGNMYT SLY SLL K + ++G
Sbjct: 295 REVEKAVMTYSKNMFEEKTKPSLLLANQVGNMYTPSLYGGLVSLLVSKSAQELAG 349
>sp|P54868|HMCS2_HUMAN Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Homo sapiens
GN=HMGCS2 PE=1 SV=1
Length = 508
Score = 397 bits (1019), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/357 (54%), Positives = 252/357 (70%), Gaps = 6/357 (1%)
Query: 3 SWHPKNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSL 62
+W PK+VGILAL++YFP V Q LE ++ V GKYTVGLGQ M FCS ED+ S+ L
Sbjct: 49 TW-PKDVGILALEVYFPAQYVDQTDLEKYNNVEAGKYTVGLGQTRMGFCSVQEDINSLCL 107
Query: 63 TVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACY 122
TVV L+E+ ++ +GRLEVG+ET+IDKSK++KT LM++F+ GNTDIEG+D+TNACY
Sbjct: 108 TVVQRLMERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACY 167
Query: 123 GGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIGPDAPIAFE 182
GGTA+LFN NW+ES+SWDGRY +VVC D AVY G ARPTGGA AVAMLIGP AP+A E
Sbjct: 168 GGTASLFNAANWMESSSWDGRYAMVVCGDIAVYPSGNARPTGGAGAVAMLIGPKAPLALE 227
Query: 183 SKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFE---KLEG-- 237
LRG+HM + YDFYKPNLASEYP+VDGKLS CYL ALD CY + +K + K G
Sbjct: 228 RGLRGTHMENVYDFYKPNLASEYPIVDGKLSIQCYLRALDRCYTSYRKKIQNQWKQAGSD 287
Query: 238 RQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESY 297
R F++ D+ Y +FH+P+ K+VQKS ARL FNDFL +S + L + L ++Y
Sbjct: 288 RPFTLDDLQYMIFHTPFCKMVQKSLARLMFNDFLSASSDTQTSLYKGLEAFGGLKLEDTY 347
Query: 298 QSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLVSG 354
++DL+KA + ++ ++D K + S + GNMYT+SLY ASLL + ++G
Sbjct: 348 TNKDLDKALLKASQDMFDKKTKASLYLSTHNGNMYTSSLYGCLASLLSHHSAQELAG 404
>sp|P13704|HMCS1_CRIGR Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Cricetulus
griseus GN=HMGCS1 PE=3 SV=1
Length = 520
Score = 393 bits (1009), Expect = e-108, Method: Compositional matrix adjust.
Identities = 190/354 (53%), Positives = 252/354 (71%), Gaps = 5/354 (1%)
Query: 6 PKNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVV 65
PK+VGI+AL+IYFP V Q LE +DGV GKYT+GLGQ M FC++ ED+ S+ LTVV
Sbjct: 14 PKDVGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQARMGFCTDREDINSLCLTVV 73
Query: 66 TSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGT 125
+L+E+ + IGRLEVG+ET+IDKSKS+K+ LMQ+FE+ GNTDIEG+D+TNACYGGT
Sbjct: 74 QNLMERNSLSYDCIGRLEVGTETIIDKSKSVKSNLMQLFEESGNTDIEGIDTTNACYGGT 133
Query: 126 AALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIGPDAPIAFESKL 185
AA+FN VNW+ES+SWDGRY LVV D A+YA G ARPTGG AVA+LIGP+AP+ F+ L
Sbjct: 134 AAVFNAVNWIESSSWDGRYALVVAGDIAIYATGNARPTGGVGAVALLIGPNAPLIFDRGL 193
Query: 186 RGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFE---KLEG--RQF 240
RG+HM HAYDFYKP++ SEYP+VDGKLS CYL ALD CY + +K + EG F
Sbjct: 194 RGTHMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYRKKIRAQWQKEGNDNDF 253
Query: 241 SMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSR 300
++ D + + HSPY KLVQKS AR+F NDFL + + L + + ++Y R
Sbjct: 254 TLNDFGFMISHSPYCKLVQKSLARMFLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDR 313
Query: 301 DLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLVSG 354
D+EKA + + +L++ K + S L+ Q GNMYT+S+Y + AS+L + ++G
Sbjct: 314 DVEKAFMKASSELFNQKTKASLLVSNQNGNMYTSSVYGSLASVLAQYSPQQLAG 367
>sp|P54869|HMCS2_MOUSE Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Mus musculus
GN=Hmgcs2 PE=1 SV=2
Length = 508
Score = 390 bits (1002), Expect = e-108, Method: Compositional matrix adjust.
Identities = 191/357 (53%), Positives = 248/357 (69%), Gaps = 6/357 (1%)
Query: 3 SWHPKNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSL 62
+W PK+VGILAL++YFP V Q LE + V GKYTVGLGQ M FCS ED+ S+ L
Sbjct: 49 TW-PKDVGILALEVYFPAQYVDQTDLEKFNNVEAGKYTVGLGQTRMGFCSVQEDINSLCL 107
Query: 63 TVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACY 122
TVV L+E+ K+ +GRLEVG+ET+IDKSK++KT LM++F+ GNTDIEG+D+TNACY
Sbjct: 108 TVVQRLMERTKLPWDAVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACY 167
Query: 123 GGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIGPDAPIAFE 182
GGTA+LFN NW+ES+ WDGRY LVVC D AVY G ARPTGGA AVAMLIGP AP+ E
Sbjct: 168 GGTASLFNAANWMESSYWDGRYALVVCGDIAVYPSGNARPTGGAGAVAMLIGPKAPLVLE 227
Query: 183 SKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKL-----EG 237
LRG+HM +AYDFYKPNLASEYP+VDGKLS CYL ALD CY + +K +
Sbjct: 228 QGLRGTHMENAYDFYKPNLASEYPLVDGKLSIQCYLRALDRCYAAYRKKIQNQWKQAGNN 287
Query: 238 RQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESY 297
+ F++ DV Y +FH+P+ K+VQKS ARL FNDFL ++S + L + L E+Y
Sbjct: 288 QPFTLDDVQYMIFHTPFCKMVQKSLARLMFNDFLSSSSDKQNNLYKGLEAFRGLKLEETY 347
Query: 298 QSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLVSG 354
++D++KA + + +++ K + S + GNMYT+SLY ASLL + ++G
Sbjct: 348 TNKDVDKALLKASLDMFNQKTKASLYLSTNNGNMYTSSLYGCLASLLSHHSAQELAG 404
>sp|O02734|HMCS2_PIG Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Sus scrofa
GN=HMGCS2 PE=2 SV=1
Length = 508
Score = 389 bits (999), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/358 (53%), Positives = 251/358 (70%), Gaps = 8/358 (2%)
Query: 3 SWHPKNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSL 62
+W PK+VGILAL++YFP V Q LE D V G+YTVGLGQ M FCS ED+ S+ L
Sbjct: 49 TW-PKDVGILALEVYFPAQYVDQTDLEKFDNVEAGRYTVGLGQTHMGFCSVQEDINSLCL 107
Query: 63 TVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACY 122
TVV L+E+ ++ +G LEVG+ET+IDKSKS+KT LM++F+ GNTDIEG+D+TNACY
Sbjct: 108 TVVQRLMERTQLPWDSVGWLEVGTETIIDKSKSVKTVLMELFQDSGNTDIEGIDTTNACY 167
Query: 123 GGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIGPDAPIAFE 182
GGTA+LFN NWVES++WDGRY +VVC D AVY G +RPTGGA AVAML+GP+AP+A E
Sbjct: 168 GGTASLFNAANWVESSAWDGRYAVVVCGDIAVYPRGNSRPTGGAGAVAMLVGPEAPLALE 227
Query: 183 SKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEK------LE 236
LRG+HM +AYDFYKPN SEYP+VDGKLS CYL ALD CY + QK EK +E
Sbjct: 228 RGLRGTHMENAYDFYKPNATSEYPLVDGKLSIQCYLRALDRCYTLYRQKIEKQWKQAGIE 287
Query: 237 GRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVES 296
R F++ D+ + +FH+P+ KLVQKS ARL F+DFL S + L + ++
Sbjct: 288 -RHFTLDDLQFMIFHTPFCKLVQKSLARLMFSDFLLADSDTQSSLYKGLEAFRGQKLEDT 346
Query: 297 YQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLVSG 354
Y ++D+EKA Q+ + L++ K +PS + GNMYT+SLY ASLL + + ++G
Sbjct: 347 YANKDIEKAFQKASLDLFNKKTKPSLYLSLHNGNMYTSSLYGCLASLLSQCSAQDLAG 404
>sp|P22791|HMCS2_RAT Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Rattus
norvegicus GN=Hmgcs2 PE=2 SV=1
Length = 508
Score = 388 bits (997), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/357 (53%), Positives = 247/357 (69%), Gaps = 6/357 (1%)
Query: 3 SWHPKNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSL 62
+W PK+VGILAL++YFP V Q LE + V GKYTVGLGQ M FCS ED+ S+ L
Sbjct: 49 TW-PKDVGILALEVYFPAQYVDQTDLEKFNNVEAGKYTVGLGQTRMGFCSVQEDINSLCL 107
Query: 63 TVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACY 122
TVV L+E+ K+ +GRLEVG+ET+IDKSK++KT LM++F+ GNTDIEG+D+TNACY
Sbjct: 108 TVVQRLMERTKLPWDAVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACY 167
Query: 123 GGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIGPDAPIAFE 182
GGTA+LFN NW+ES+ WDGRY LVVC D AVY G RPTGGA AVAMLIGP AP+ E
Sbjct: 168 GGTASLFNAANWMESSYWDGRYALVVCGDIAVYPSGNPRPTGGAGAVAMLIGPKAPLVLE 227
Query: 183 SKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKL-----EG 237
LRG+HM +AYDFYKPNLASEYP+VDGKLS CYL ALD CY + +K +
Sbjct: 228 QGLRGTHMENAYDFYKPNLASEYPLVDGKLSIQCYLRALDRCYAAYRRKIQNQWKQAGNN 287
Query: 238 RQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESY 297
+ F++ DV Y +FH+P+ K+VQKS ARL FNDFL ++S + L + L E+Y
Sbjct: 288 QPFTLDDVQYMIFHTPFCKMVQKSLARLMFNDFLSSSSDKQNNLYKGLEAFKGLKLEETY 347
Query: 298 QSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLVSG 354
++D++KA + + +++ K + S + GNMYT+SLY ASLL + ++G
Sbjct: 348 TNKDVDKALLKASLDMFNKKTKASLYLSTNNGNMYTSSLYGCLASLLSHHSAQELAG 404
>sp|Q2KIE6|HMCS2_BOVIN Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Bos taurus
GN=HMGCS2 PE=1 SV=1
Length = 508
Score = 385 bits (990), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/357 (52%), Positives = 248/357 (69%), Gaps = 6/357 (1%)
Query: 3 SWHPKNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSL 62
+W PK+VGILA+++YFP V Q LE + V G+YTVGLGQ M FCS EDV S+ L
Sbjct: 49 TW-PKDVGILAMEVYFPAQYVDQTELEKFNKVEAGRYTVGLGQTQMGFCSVQEDVNSLCL 107
Query: 63 TVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACY 122
TVV L+E+ ++ +GRLEVG+ET+IDKSK++KT LM++F+ GNTDIEG+D+TNACY
Sbjct: 108 TVVQQLMERTQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACY 167
Query: 123 GGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIGPDAPIAFE 182
GGTA+LFN NW+ES+SWDGRY LVVC D AVY G ARPTGGA AVAML+GP+AP+ E
Sbjct: 168 GGTASLFNAANWMESSSWDGRYALVVCGDIAVYPSGNARPTGGAGAVAMLVGPEAPLVLE 227
Query: 183 SKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLE-----G 237
LRG+HM + YDFYKP++ SEYP+VDGKLS CYL ALD CY ++ QK EK
Sbjct: 228 RGLRGTHMENVYDFYKPDVTSEYPLVDGKLSIQCYLRALDKCYAFYRQKIEKQWKQAGID 287
Query: 238 RQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESY 297
R F++ DV Y +FH+P+ KLVQKS ARL FNDFL + + L + L ++Y
Sbjct: 288 RPFTLDDVQYMIFHTPFCKLVQKSLARLMFNDFLLASGDTQTGIYKGLEAFRGLKLEDTY 347
Query: 298 QSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLVSG 354
++D++KA + + +++ K + S + GNMYT+SLY ASLL + ++G
Sbjct: 348 TNKDVDKAFLKASLNMFNKKTKNSLYLSTYNGNMYTSSLYGCLASLLAHHSAQDLAG 404
>sp|Q86HL5|HMCSB_DICDI Hydroxymethylglutaryl-CoA synthase B OS=Dictyostelium discoideum
GN=hgsB PE=3 SV=1
Length = 468
Score = 377 bits (967), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/340 (53%), Positives = 244/340 (71%), Gaps = 5/340 (1%)
Query: 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVT 66
K++GI A+DIYFP T V Q L+ +D VS GKYT+GLGQ M+F + ED++SM++T V
Sbjct: 5 KDIGICAIDIYFPQTYVNQSELKKYDKVSNGKYTIGLGQTNMSFVGDREDIVSMAMTSVK 64
Query: 67 SLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTA 126
++ KY ID IGRLEVG+ET+IDKSKS+K+ +M +F++YGNT +EGVD+ NACYGGT
Sbjct: 65 MMMSKYSIDYQSIGRLEVGTETIIDKSKSVKSSIMSLFQEYGNTSLEGVDTLNACYGGTN 124
Query: 127 ALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIGPDAPIAFESKLR 186
ALFN + W+ES+ WDGRY LVV D AVY++G ARPTGGA V MLIGP+A + F+ LR
Sbjct: 125 ALFNSLQWIESSYWDGRYALVVTGDIAVYSKGAARPTGGAGVVTMLIGPNATLIFDQSLR 184
Query: 187 GSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKL-EGRQFSMLDV 245
G+HM + DFYKP+L+SEYP VDGKLS CYL ALD CY + +KFE + + +FSM
Sbjct: 185 GTHMENVNDFYKPDLSSEYPYVDGKLSIECYLRALDKCYLEYKKKFESINDDNKFSMDSF 244
Query: 246 DYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSD-VESYQSRDLEK 304
DY FHSPYN+LVQKS+ARL +NDFL+N ++ + L P+ LS +SY + L++
Sbjct: 245 DYVCFHSPYNRLVQKSYARLIYNDFLQNPNNP---KYQDLLPFKDLSTGKDSYINSKLDQ 301
Query: 305 ASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLL 344
+ +++ + KV PSTL+ K+ GN Y S+Y+ SLL
Sbjct: 302 ITLKLSLDDFKTKVNPSTLLSKECGNSYCGSVYSGILSLL 341
>sp|P54870|HMCS2_BLAGE Hydroxymethylglutaryl-CoA synthase 2 OS=Blattella germanica
GN=HMGCS-2 PE=2 SV=1
Length = 455
Score = 369 bits (948), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/350 (53%), Positives = 240/350 (68%), Gaps = 13/350 (3%)
Query: 1 MTSWHPKNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISM 60
M W P++VGI+ +++ FP V Q LE +D VS GKYT+GLGQD M C++ ED+ S+
Sbjct: 1 MAHW-PEDVGIIGIEMIFPSLYVDQAELETYDEVSPGKYTMGLGQDKMGVCTDREDINSL 59
Query: 61 SLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNA 120
LT V L+E+ ID IG LEVG+ET++DK KS+KT LMQ+FE+ GNTD+EG+D+ NA
Sbjct: 60 CLTAVDKLMERNNIDYNDIGWLEVGTETILDKVKSVKTVLMQLFEESGNTDVEGIDTINA 119
Query: 121 CYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIGPDAPIA 180
CY GTAALFN + W+ES+SWDGRY +VV D A+YA+ PTGGA A+ MLIG +API
Sbjct: 120 CYRGTAALFNALIWIESSSWDGRYAIVVAADIAIYAK-ECSPTGGAGALLMLIGANAPIV 178
Query: 181 FESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLE---G 237
+ +R SHM HAYDFYKP+L SEYPVVDGKLS CYL ALD CY FC K EK G
Sbjct: 179 IDRGVRASHMKHAYDFYKPDLMSEYPVVDGKLSVQCYLSALDHCYPRFCSKTEKYLKRCG 238
Query: 238 RQFSMLDVDY---FVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDV 294
++ + +D+DY FVFHSPY KLVQKS ARL NDF++ ++ + + L
Sbjct: 239 KENTKIDLDYFDAFVFHSPYCKLVQKSVARLVLNDFIQYPEKYQDLQQLR-----NLKFE 293
Query: 295 ESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLL 344
++Y RD+EK +KQL++ K +PS ++ QVGNMYT SLY SLL
Sbjct: 294 DTYFDRDIEKIFMDKSKQLFEKKTKPSLMLANQVGNMYTTSLYGGLVSLL 343
>sp|P54839|HMCS_YEAST Hydroxymethylglutaryl-CoA synthase OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ERG13 PE=1 SV=1
Length = 491
Score = 360 bits (925), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 184/349 (52%), Positives = 235/349 (67%), Gaps = 15/349 (4%)
Query: 5 HPKNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTV 64
P+NVGI + IY P CV Q LE DGVS+GKYT+GLGQ M+F ++ ED+ SMSLTV
Sbjct: 45 RPQNVGIKGIQIYIPTQCVNQSELEKFDGVSQGKYTIGLGQTNMSFVNDREDIYSMSLTV 104
Query: 65 VTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGG 124
++ L++ Y ID +IGRLEVG+ET+IDKSKS+K+ LMQ+F + NTD+EG+D+ NACYGG
Sbjct: 105 LSKLIKSYNIDTNKIGRLEVGTETLIDKSKSVKSVLMQLFGE--NTDVEGIDTLNACYGG 162
Query: 125 TAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIGPDAPIAFESK 184
T ALFN +NW+ES +WDGR +VVC D A+Y +G ARPTGGA VAM IGPDAPI F+S
Sbjct: 163 TNALFNSLNWIESNAWDGRDAIVVCGDIAIYDKGAARPTGGAGTVAMWIGPDAPIVFDS- 221
Query: 185 LRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKF-------EKLEG 237
+R S+M HAYDFYKP+ SEYP VDG S TCY+ ALD YK + +K +
Sbjct: 222 VRASYMEHAYDFYKPDFTSEYPYVDGHFSLTCYVKALDQVYKSYSKKAISKGLVSDPAGS 281
Query: 238 RQFSMLD-VDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVES 296
++L DY VFH P KLV KS+ RL +NDF N E+ E +T ES
Sbjct: 282 DALNVLKYFDYNVFHVPTCKLVTKSYGRLLYNDFRANPQLFPEVDAE----LATRDYDES 337
Query: 297 YQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLH 345
+++EK VAK + +V S ++P GNMYTAS+YAAFASLL+
Sbjct: 338 LTDKNIEKTFVNVAKPFHKERVAQSLIVPTNTGNMYTASVYAAFASLLN 386
>sp|P54874|HMCS_SCHPO Hydroxymethylglutaryl-CoA synthase OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=hcs1 PE=1 SV=1
Length = 447
Score = 334 bits (856), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 172/345 (49%), Positives = 230/345 (66%), Gaps = 8/345 (2%)
Query: 3 SWHPKNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSL 62
S+ K++GI L +Y P V Q ALE HDGVS GKYT+GLG MAF + ED+ S L
Sbjct: 2 SFDRKDIGIKGLVLYTPNQYVEQAALEAHDGVSTGKYTIGLGLTKMAFVDDREDIYSFGL 61
Query: 63 TVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACY 122
T ++ L+++Y+ID ++IGRLEVG+ET+IDKSKS+K+ LMQ+F N ++EG+D NACY
Sbjct: 62 TALSQLIKRYQIDISKIGRLEVGTETIIDKSKSVKSVLMQLFGD--NHNVEGIDCVNACY 119
Query: 123 GGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIGPDAPIAFE 182
GG ALFN ++W+ES++WDGR G+VV D A+YA+G ARPTGGA VA+L+GP+API FE
Sbjct: 120 GGVNALFNTIDWIESSAWDGRDGIVVAGDIALYAKGNARPTGGAGCVALLVGPNAPIVFE 179
Query: 183 SKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCY-KYFCQKFEKLEGRQFS 241
LRG++M HAYDFYKP+L SEYP VDG S CY+ ALD Y Y + K Q
Sbjct: 180 PGLRGTYMQHAYDFYKPDLTSEYPYVDGHFSLECYVKALDGAYANYNVRDVAKNGKSQGL 239
Query: 242 MLD-VDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVD-EIAKEKLAPYSTLSDVESYQS 299
LD DY +FH+P K VQK++ARL + D S+ + E +E L STL +S
Sbjct: 240 GLDRFDYCIFHAPTCKQVQKAYARLLYTDSAAEPSNPELEGVRELL---STLDAKKSLTD 296
Query: 300 RDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLL 344
+ LEK + K+ ++ +V PS P GNMYTAS+++ +LL
Sbjct: 297 KALEKGLMAITKERFNKRVSPSVYAPTNCGNMYTASIFSCLTALL 341
>sp|P54871|HMCS_CAEEL Hydroxymethylglutaryl-CoA synthase OS=Caenorhabditis elegans
GN=F25B4.6 PE=2 SV=2
Length = 462
Score = 257 bits (657), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 199/340 (58%), Gaps = 14/340 (4%)
Query: 8 NVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTS 67
+VGI A+++YFP V Q LE + VS GKYT+GLGQ M FCS+ ED++S+SLTV
Sbjct: 13 DVGIGAIELYFPQNFVDQNDLEKFNNVSSGKYTIGLGQQQMGFCSDNEDIVSISLTVTRK 72
Query: 68 LLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAA 127
L+E YKI IG L VG+ET+IDKSKS+KT LM +F GN+DIEGVD NAC+GG A
Sbjct: 73 LIETYKISTDSIGCLVVGTETMIDKSKSVKTALMDLFP--GNSDIEGVDIKNACFGGAQA 130
Query: 128 LFNCVNWVE-SASWDGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIGPDAPIAFESKLR 186
L + ++WV + D + +VV D A+Y EGPAR TGGA A+A LI PDA I + +
Sbjct: 131 LLHAIDWVTVNHPLDKKNAIVVVADIAIYEEGPARCTGGAGAIAFLICPDASIPIDRQFS 190
Query: 187 GSHMSHAYDFYKP--NLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLD 244
HM + +DF+KP + SEYPVVDG LS + YL A+ Y YF K + +
Sbjct: 191 ACHMKNTWDFFKPITPIPSEYPVVDGSLSLSSYLEAVRMTYTYFISKVNRHTTGIDGLNS 250
Query: 245 VDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEK 304
D HSP+ K+VQK A + + D ++ ++L ++ L K
Sbjct: 251 FDGVFLHSPFTKMVQKGLAVMNYTD--------SQLRHKQLNGNGVDHKLDENDRAGLAK 302
Query: 305 ASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLL 344
+++ Q++ K P + +++GNMYT SL+A + L
Sbjct: 303 MI-ELSAQVWKEKTDPYLVFNRRIGNMYTPSLFAQLLAYL 341
>sp|Q8TVL0|Y1379_METKA UPF0219 protein MK1379 OS=Methanopyrus kandleri (strain AV19 / DSM
6324 / JCM 9639 / NBRC 100938) GN=MK1379 PE=3 SV=1
Length = 350
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 107/264 (40%), Gaps = 14/264 (5%)
Query: 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVT 66
+ VGI+ Y P + E + G GL + + SE ED ++++
Sbjct: 5 ERVGIVGYGAYVPRYRIKAEEIAAVWGDDVDSIKSGLMIEEKSVPSETEDSATIAVEAAK 64
Query: 67 SLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTA 126
+ + + +IDP IG + VGSE+ K T + D+ D AC GTA
Sbjct: 65 NAVARAEIDPKDIGAIYVGSESPPYAVKPTATIVAAAIG--ATPDLTAADYEFACKAGTA 122
Query: 127 ALFNCVNWVESASWDGRYGLVVCTDSAVYAEG-PARPTGGAAAVAMLIGPDAPIAFESKL 185
A+ C V S +YGL + D+A A G P T A A +IG +A E +
Sbjct: 123 AIQTCAGLVASGMI--KYGLAIGADTAQGAPGDPLEYTAAAGGAAFVIGRKKLVA-EMEG 179
Query: 186 RGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKL-EGRQFSMLD 244
S+ + DF++ YP G+ + + +K+ + L E S D
Sbjct: 180 TYSYTTDTPDFWR-REGQPYPRHGGRFT------GAPAYFKHIIRAARGLMEELDLSPED 232
Query: 245 VDYFVFHSPYNKLVQKSFARLFFN 268
DY VFH P K +K L F
Sbjct: 233 FDYAVFHQPNGKFPRKVARSLGFE 256
>sp|O26883|Y792_METTH UPF0219 protein MTH_792 OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=MTH_792 PE=3 SV=2
Length = 346
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 109/261 (41%), Gaps = 14/261 (5%)
Query: 10 GILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLL 69
GI+ +Y P + E + G + GL + + ED ++S+ + L
Sbjct: 3 GIVGYGVYIPSYRIKVEEIARVWGDDPQAISRGLVVEEKSVPGPDEDTATISVEAARNAL 62
Query: 70 EKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALF 129
+ +IDP++IG + VGSE+ K T + + E ++ D AC GTA +
Sbjct: 63 RRSQIDPSEIGAVYVGSESHPYAVKPTATIVAEAVEA--TPEMTAADLEFACKAGTAGIQ 120
Query: 130 NCVNWVESASWDGRYGLVVCTDSAVYAEGPARP-TGGAAAVAMLIGPDAPIAFESKLRGS 188
C+ V+S +YGL V D+A A G A T A A +IG +A + K S
Sbjct: 121 ACMGLVDSGII--KYGLAVGADTAQGAPGDALEYTASAGGAAYVIGGKNCLA-DIKETYS 177
Query: 189 HMSHAYDFYKPNLASEYPVVDGKLS-QTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDY 247
+ DFY+ YP G+ + + Y + + +K S D DY
Sbjct: 178 FTTDTPDFYR-REGMPYPRHGGRFTGEPAYFKHVLGAARGMMEK------TGLSADDFDY 230
Query: 248 FVFHSPYNKLVQKSFARLFFN 268
VFH P K K+ +L F
Sbjct: 231 AVFHQPNGKFYLKAARKLGFE 251
>sp|Q4J933|Y1362_SULAC UPF0219 protein Saci_1362 OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=Saci_1362 PE=3 SV=1
Length = 348
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 92/205 (44%), Gaps = 13/205 (6%)
Query: 55 EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEG 114
ED +M+ + L + IDP+QIG + GSE+ + K T L+ D G
Sbjct: 48 EDSTTMAWESSKNALRRANIDPSQIGVVLFGSESKVYAVKPTATILIDALGV--TNDSLG 105
Query: 115 VDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPA-RPTGGAAAVAMLI 173
D AC G +AAL VE++ +YGLV+ +D+A G + AA+V+ ++
Sbjct: 106 ADMEFACRGASAALRLVGGMVEASKI--KYGLVIGSDTAQSNPGDVLELSSAAASVSYIV 163
Query: 174 GPDAPIAFESKLRGSHMSHAYDFYKPNLASEYPV-VDGKLSQTCYLMALDSCYKYFCQKF 232
GP+ + S+ S DF++ + YPV +G + Y + S ++
Sbjct: 164 GPENEAGAVIEAAVSYTSDTPDFWRRD-GMPYPVHGEGFTGEPAYFDHILSAVNLLFRE- 221
Query: 233 EKLEGRQFSMLDVDYFVFHSPYNKL 257
+ + D DYFVFH P K
Sbjct: 222 -----NGYKISDFDYFVFHQPNGKF 241
>sp|Q2NHU7|Y117_METST UPF0219 protein Msp_0117 OS=Methanosphaera stadtmanae (strain DSM
3091) GN=Msp_0117 PE=3 SV=1
Length = 346
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 93/218 (42%), Gaps = 16/218 (7%)
Query: 55 EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEG 114
ED I++S+ L++ +IDP IG + VGSE+ K T + N +
Sbjct: 48 EDTITISVEAARRALQRAEIDPQDIGAIYVGSESHPYAVKPTATIVADAIRASPN--LTA 105
Query: 115 VDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARP-TGGAAAVAMLI 173
D AC GTA + V V+S +YGL + D++ A G A T A A +I
Sbjct: 106 ADLEFACKAGTAGIQAAVGLVKSGMI--KYGLAIGADTSQGAPGDALEYTASAGGAAYII 163
Query: 174 GPDAPIAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLS-QTCYLMALDSCYKYFCQKF 232
G D IA + + S + DFY+ YP G+ + Q Y +K+
Sbjct: 164 GEDNTIA-DIEHTCSFTTDTPDFYR-REGQAYPSHGGRFTGQPAY-------FKHVLGAA 214
Query: 233 EK-LEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFND 269
+ LE + D DY VFH P K + +L F +
Sbjct: 215 NRMLEETGTTAKDYDYAVFHQPNGKFYIRVARKLGFTE 252
>sp|A5UNI8|Y1561_METS3 UPF0219 protein Msm_1561 OS=Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861) GN=Msm_1561 PE=3 SV=1
Length = 345
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 111/262 (42%), Gaps = 14/262 (5%)
Query: 9 VGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSL 68
VGI+ Y P + E + G + GL + + S ED ++++T
Sbjct: 2 VGIVGYGAYVPSYRIKVEEIAKVWGDDPVALSRGLVVNEKSVPSADEDTATIAVTAARYA 61
Query: 69 LEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAAL 128
L + +IDP +IG + VGSE+ K T + + D+ D AC GTA +
Sbjct: 62 LARAQIDPQKIGAIYVGSESHPYAVKPSATIVAEAIN--ATPDLTAADLEFACKAGTAGI 119
Query: 129 FNCVNWVESASWDGRYGLVVCTDSAVYAEGPARP-TGGAAAVAMLIGPDAPIAFESKLRG 187
+ V+S + YGL + D++ A G A T A A +IG D +A + +
Sbjct: 120 QMTMGLVDSDMIE--YGLAIGADTSQGAPGDALEYTASAGGAAYIIGKDNTLA-DIEETY 176
Query: 188 SHMSHAYDFYKPNLASEYPVVDGKLS-QTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVD 246
S + DFY+ +YP G+ + + Y + S K FEK + + D D
Sbjct: 177 SFTTDTPDFYR-REGQDYPSHGGRFTGEPAYFKHVLSAAKGL---FEKTDSKP---EDYD 229
Query: 247 YFVFHSPYNKLVQKSFARLFFN 268
Y FH P K ++ +L F
Sbjct: 230 YACFHQPNGKFYLRAGKKLGFT 251
>sp|Q9HI87|Y1455_THEAC UPF0219 protein Ta1455 OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=Ta1455 PE=3 SV=1
Length = 351
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 93/218 (42%), Gaps = 16/218 (7%)
Query: 55 EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEG 114
EDV ++S+ + L++ KIDP +IG + VGSE+ K T + + +
Sbjct: 48 EDVATISVEAARNALKRKKIDPKEIGAIYVGSESHPYAVKPTATIVGSAIGV--DFSLFA 105
Query: 115 VDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARP-TGGAAAVAMLI 173
D AC GTA + N V+S +YGL + D++ A G A + A A +I
Sbjct: 106 ADYEFACKAGTAGMQNVKAMVDSGMI--KYGLAIGADTSQGAPGDALEYSASAGGTAFII 163
Query: 174 GPDAPIA-FESKLRGSHMSHAYDFYKPNLASEYPVVDGKLS-QTCYLMALDSCYKYFCQK 231
G D IA S L S S DF++ YP + + + Y + + K ++
Sbjct: 164 GKDDTIAEINSTL--SVASDTPDFWR-REGQPYPSHGERFTGEPAYFRHVITAAKMMMER 220
Query: 232 FEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFND 269
E D DY VFH P K ++ L F +
Sbjct: 221 MET------QPKDYDYVVFHQPNGKFPTRAAKMLGFEE 252
>sp|A1RSQ5|Y811_PYRIL UPF0219 protein Pisl_0811 OS=Pyrobaculum islandicum (strain DSM
4184 / JCM 9189) GN=Pisl_0811 PE=3 SV=1
Length = 350
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 14/205 (6%)
Query: 55 EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEG 114
ED +++++ L++ +IDP +IG + VG+E+ K I + L+ N +
Sbjct: 50 EDAVTIAVEAAKRALKRARIDPKRIGAIYVGTESKPYAVKPISSILVDALGLSNN--VFA 107
Query: 115 VDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARP-TGGAAAVAMLI 173
VD AC G+ L V VES + YG+ V D++ G + + VA+++
Sbjct: 108 VDMEFACKAGSEGLMAAVGLVESGRIE--YGMTVGADTSQGEPGEHLEYSASSGGVALIV 165
Query: 174 GPDAPIAFESKLRGSHMSHAYDFYKPNLASEYPV-VDGKLSQTCYLMALDSCYKYFCQKF 232
G D +A E + S +S DF++ S YP+ +G + Y + + +K+
Sbjct: 166 GRDGIVA-ELEAVYSFVSDTPDFWRRE-GSPYPMHGEGFTGEPAYFRHIIGATRGLMEKY 223
Query: 233 EKLEGRQFSMLDVDYFVFHSPYNKL 257
+ D Y VFH P +
Sbjct: 224 ------GYKPSDFTYAVFHQPNGRF 242
>sp|P40830|PKSG_BACSU Polyketide biosynthesis 3-hydroxy-3-methylglutaryl-ACP synthase
PksG OS=Bacillus subtilis (strain 168) GN=pksG PE=1 SV=2
Length = 420
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 129/306 (42%), Gaps = 56/306 (18%)
Query: 55 EDVISMSLTVVTSLLEKY-KIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYG-NTDI 112
ED ++ + +++ + + +I L SE+ ID KS+ T+ I E G N +
Sbjct: 49 EDPVTFGVNAAKPIIDALSEAEKDRIELLITCSESGIDFGKSLSTY---IHEYLGLNRNC 105
Query: 113 EGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVY--AEGP---------AR 161
+ ACY GTA VN++ S + G LV+ +D + + AEG A
Sbjct: 106 RLFEVKQACYSGTAGFQMAVNFILSQTSPGAKALVIASDISRFLIAEGGDALSEDWSYAE 165
Query: 162 PTGGAAAVAMLIGPDAPI-AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMA 220
P+ GA AVA+L+G + + + G + D +P SE D LS Y
Sbjct: 166 PSAGAGAVAVLVGENPEVFQIDPGANGYYGYEVMDTCRPIPDSE--AGDSDLSLMSY--- 220
Query: 221 LDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEI 280
LD C + F + +++ G + Y +H+P+ +V+ + + + + ++
Sbjct: 221 LDCCEQTFLEYQKRVPGANYQD-TFQYLAYHTPFGGMVKGA-----------HRTMMRKV 268
Query: 281 AKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAF 340
AK K + T + +V+P ++VGN+ A+L+ A
Sbjct: 269 AKVKTSGIET----------------------DFLTRVKPGLNYCQRVGNIMGAALFLAL 306
Query: 341 ASLLHE 346
AS + +
Sbjct: 307 ASTIDQ 312
>sp|O30256|Y2415_ARCFU UPF0219 protein AF_2415 OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=AF_2415 PE=3 SV=2
Length = 343
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 110/261 (42%), Gaps = 13/261 (4%)
Query: 9 VGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSL 68
+GI++ Y P + E + G K GLG + ED ++++
Sbjct: 2 IGIVSYGSYVPKFRIRVEEIARVWGEDAKKIKDGLGVHEKSVPGMDEDAATIAVEAAREA 61
Query: 69 LEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAAL 128
+ + I+P +IG + VGSE+ K T + + GN D D AC GTA +
Sbjct: 62 IRRAGINPEEIGAVFVGSESHPYAVKPTATIVGEAL-GVGN-DYFAADLEFACKAGTAGM 119
Query: 129 FNCVNWVESASWDGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIGPDAPIAFESKLRGS 188
C + V++ +YGL + D++ G A AA A I + PIA E + S
Sbjct: 120 QICYSMVKAGMI--KYGLAIGADTSQARPGDALEYAAAAGGAAFIIGENPIA-EVEATYS 176
Query: 189 HMSHAYDFYKPNLASEYPVVDGKLSQ-TCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDY 247
S DF++ +L YP G+ + Y + S K +K+ + + D DY
Sbjct: 177 FTSDTPDFWRRDL-QPYPSHGGRFTGLPAYFRHVISAAKGLMEKY------GYKVEDFDY 229
Query: 248 FVFHSPYNKLVQKSFARLFFN 268
VFH P K ++ L F+
Sbjct: 230 AVFHMPNAKFPVRAAKMLGFS 250
>sp|Q9UYY8|Y1369_PYRAB UPF0219 protein PYRAB13690 OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=acaA PE=3 SV=1
Length = 350
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 115/292 (39%), Gaps = 49/292 (16%)
Query: 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVT 66
K +GI+ Y P + E + GVS + A ED +++ +
Sbjct: 9 KEIGIVGYGAYVPMYRIRNEEIGRVWGVSN------FPIEEKAVPGLDEDAVTIGIEAAR 62
Query: 67 SLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT-DIEGVDSTNACYGGT 125
+ L++ KIDP +I + GSE+ K ++K I E G T D+E D AC GT
Sbjct: 63 NALKRAKIDPREIRAIWFGSES---KPYAVKPSATIIAEAIGATPDLEAADFEFACKAGT 119
Query: 126 AALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARP------TGGAAAVAMLIGPDAPI 179
AL + +V AS +Y + + D+A RP T GA A ++G +
Sbjct: 120 EALQAAIGFV--ASGMAKYAMAIGADTA-----QGRPADHLEFTAGAGGAAFIVGEKSSE 172
Query: 180 A---FESKLRGSHMSHAYDFYKPNLASEYPVVDGKLS-QTCYLMALDSCYKYFCQKFEKL 235
FE S+++ DF++ YP + + + Y + + K +
Sbjct: 173 TLAYFEGSY--SYVTDTPDFWR-RQHEHYPRHGNRFTGEPAYFHHVITAAKTLMDEL--- 226
Query: 236 EGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAP 287
+ D DY VFH P K F A+ + I KEK+ P
Sbjct: 227 ---GLTPADFDYAVFHQPNVK-------------FPLTAAKILGIPKEKVLP 262
>sp|A3MV40|Y1082_PYRCJ UPF0219 protein Pcal_1082 OS=Pyrobaculum calidifontis (strain JCM
11548 / VA1) GN=Pcal_1082 PE=3 SV=1
Length = 350
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 14/213 (6%)
Query: 55 EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEG 114
ED +++++ + + IDP +IG + VG+E+ K I + L+ N +
Sbjct: 50 EDAVTIAVEAARRAIRRGGIDPRKIGAVYVGTESKPYAVKPISSILIDALGLTNN--VFA 107
Query: 115 VDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARP-TGGAAAVAMLI 173
VD AC G+ L + VE+ + YG+ V TD++ G + + VA+++
Sbjct: 108 VDMEFACKAGSDGLVAAIGLVEAGRVE--YGMTVGTDTSQGEPGEHLEYSASSGGVALIV 165
Query: 174 GPDAPIAFESKLRGSHMSHAYDFYKPNLASEYPV-VDGKLSQTCYLMALDSCYKYFCQKF 232
G D +A E + + +S DF++ S YP+ +G + Y + K +K+
Sbjct: 166 GKDG-VAAELEAMYAFVSDTPDFWRRE-GSPYPMHGEGFTGEPAYFRHVIGAAKGLMEKY 223
Query: 233 EKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARL 265
+ D Y VFH P + ++ + L
Sbjct: 224 ------GYKPSDFTYVVFHQPNGRFPVRAASML 250
>sp|Q58941|Y1546_METJA UPF0219 protein MJ1546 OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=MJ1546 PE=3 SV=3
Length = 345
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 94/218 (43%), Gaps = 16/218 (7%)
Query: 55 EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEG 114
ED ++++ + L++ +IDP IG + VGSE+ K T + + + D+
Sbjct: 48 EDTATIAVEAARNALKRAEIDPKDIGAVYVGSESHPYAVKPTATIVAEAID--ATPDLTA 105
Query: 115 VDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARP-TGGAAAVAMLI 173
D AC GTA + C+ VES +YGL + D+A A G A T A A +I
Sbjct: 106 ADLEFACKAGTAGIQMCMGLVESGLI--KYGLAIGADTAQGAPGDALEYTAAAGGAAYII 163
Query: 174 GPDAPIAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLS-QTCYLMALDSCYKYFCQKF 232
G IA E S+ + DF++ YP G+ + + Y + + K +K
Sbjct: 164 GKSNVIA-EFNGTYSYTTDTPDFWR-REGKPYPRHGGRFTGEPAYFRHVINAAKGLMEKM 221
Query: 233 -EKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFND 269
K E D DY VFH P K + L F +
Sbjct: 222 GTKPE-------DYDYCVFHQPNGKFYIRVAKILGFKE 252
>sp|Q8ZVP4|Y2185_PYRAE UPF0219 protein PAE2185 OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827)
GN=PAE2185 PE=3 SV=1
Length = 350
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 104/238 (43%), Gaps = 33/238 (13%)
Query: 55 EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEG 114
ED +++++ L++ I+P +IG + VG+E+ K I + L+ N +
Sbjct: 50 EDAVTIAVEAARRALKRAGINPKRIGAVYVGTESKPYAVKPISSILVDALGLSNN--VFA 107
Query: 115 VDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGP----ARPTGGAAAVA 170
VD AC G+ L + VES + YG+ V TD++ G + +GGA +
Sbjct: 108 VDMEFACKAGSEGLVAAIGLVESGRIE--YGMTVGTDTSQGEPGEHLEYSASSGGA---S 162
Query: 171 MLIGPDAPIAFESKLRGSHMSHAYDFYKPNLASEYPV-VDGKLSQTCYLMALDSCYKYFC 229
+++G D +A E + S++S DF++ S YP+ +G + Y + +
Sbjct: 163 LIVGRDGVVA-ELEAVYSYVSDTPDFWRRE-GSPYPMHGEGFTGEPAYFRHIIGAARGLM 220
Query: 230 QKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAP 287
+++ + D Y VFH P + F A+S+ I EK+ P
Sbjct: 221 ERY------GYKPSDFAYVVFHQPNGR-------------FPVRAASMLNIPMEKVKP 259
>sp|O58410|Y677_PYRHO UPF0219 protein PH0677 OS=Pyrococcus horikoshii (strain ATCC 700860
/ DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=PH0677
PE=3 SV=1
Length = 350
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 105/262 (40%), Gaps = 36/262 (13%)
Query: 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVT 66
K+VGI+ Y P + E + G+S + A ED I++ +
Sbjct: 9 KDVGIVGYGAYVPMYRIRNEEIGRVWGISN------FPIEEKAVPGLDEDAITIGIEAAR 62
Query: 67 SLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT-DIEGVDSTNACYGGT 125
+ L++ KIDP I + GSE+ K ++K I E G T D+E D AC GT
Sbjct: 63 NALKRAKIDPKDIRAIWFGSES---KPYAVKPSSTVIAEAIGATPDLEAADFEFACKAGT 119
Query: 126 AALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARP------TGGAAAVAMLIGPDAPI 179
AL + +V AS +Y + + D+A RP T GA A +IG +
Sbjct: 120 EALQAAIGFV--ASGMAKYAMAIGADTA-----QGRPGDHLEFTAGAGGAAFIIGEKSSE 172
Query: 180 A---FESKLRGSHMSHAYDFYKPNLASEYPVVDGKLS-QTCYLMALDSCYKYFCQKFEKL 235
FE S+++ DF++ YP + + + Y + + K +
Sbjct: 173 TVAYFEGSY--SYVTDTPDFWR-RQHEHYPRHGNRFTGEPAYFHHVVTAAKTLMDEL--- 226
Query: 236 EGRQFSMLDVDYFVFHSPYNKL 257
+ D DY VFH P K
Sbjct: 227 ---GLTPEDFDYAVFHQPNVKF 245
>sp|Q97CG9|Y132_THEVO UPF0219 protein TV0132 OS=Thermoplasma volcanium (strain ATCC 51530
/ DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) GN=TV0132
PE=3 SV=1
Length = 351
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 93/218 (42%), Gaps = 16/218 (7%)
Query: 55 EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEG 114
EDV ++S+ + L++ KI+P +IG + VGSE+ K T + + +
Sbjct: 48 EDVATISVEAARNALKRKKINPKEIGAIYVGSESHPYAVKPTATIVGSAIGV--DFSLFA 105
Query: 115 VDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARP-TGGAAAVAMLI 173
D AC GTA + N V++ +YGL + D++ A G A + A A +I
Sbjct: 106 ADYEFACKAGTAGMQNVKAMVDAGMI--KYGLAIGADTSQGAPGDALEYSASAGGSAFII 163
Query: 174 GPDAPIA-FESKLRGSHMSHAYDFYKPNLASEYPVVDGKLS-QTCYLMALDSCYKYFCQK 231
G D IA S L S S DF++ YP + + + Y + + K ++
Sbjct: 164 GKDDVIAEINSTL--SVASDTPDFWR-REGQPYPSHGERFTGEPAYFRHVVNAAKMMMER 220
Query: 232 FEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFND 269
E D DY VFH P K ++ L F +
Sbjct: 221 MET------QPKDYDYVVFHQPNGKFPTRAAKLLGFEE 252
>sp|A8ME61|Y1240_CALMQ UPF0219 protein Cmaq_1240 OS=Caldivirga maquilingensis (strain ATCC
700844 / DSMZ 13496 / JCM 10307 / IC-167) GN=Cmaq_1240
PE=3 SV=1
Length = 349
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 90/201 (44%), Gaps = 14/201 (6%)
Query: 55 EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEG 114
ED ++M++ L + + P+++G + G+E+ K I + L+ N +
Sbjct: 49 EDPVTMAVEASRDALIRAGVKPSEVGAVFAGTESKPYAVKPISSILIDALGL--NRQVYS 106
Query: 115 VDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARP-TGGAAAVAMLI 173
VD AC G+ A+ N + V++ S +YG+ V TDS+ G T G AVA +I
Sbjct: 107 VDMEFACKAGSDAIINLMGLVKANSI--KYGIAVGTDSSQGEPGEHLEYTVGTGAVAYVI 164
Query: 174 GPDAPIAFESKLRGSHMSHAYDFYKPNLASEYPV-VDGKLSQTCYLMALDSCYKYFCQKF 232
G + +A E K + S DF++ + +S YPV +G + Y + K +
Sbjct: 165 G-SSNLAAEIKYTYPYASDTPDFWRRD-SSPYPVHGEGFTGEPAYFKHIIGAAKGLMDEL 222
Query: 233 EKLEGRQFSMLDVDYFVFHSP 253
D DY VFH P
Sbjct: 223 ------GMKPNDFDYAVFHQP 237
>sp|Q51798|Y972_PYRFU UPF0219 protein PF0972 OS=Pyrococcus furiosus (strain ATCC 43587 /
DSM 3638 / JCM 8422 / Vc1) GN=PF0972 PE=3 SV=1
Length = 350
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 105/262 (40%), Gaps = 36/262 (13%)
Query: 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVT 66
K+VGI+ Y P + E + GVS + A ED I++ +
Sbjct: 9 KDVGIVGYGAYVPMYRIRNEEIGRVWGVSS------FPIEEKAVPGLDEDAITIGIEAAR 62
Query: 67 SLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT-DIEGVDSTNACYGGT 125
+ L++ KIDP +I + G+E+ K ++K I E G T D+E D AC GT
Sbjct: 63 NALKRAKIDPQKIRAIWFGTES---KPYAVKPSATIIAEAIGATPDLEAADFEFACKAGT 119
Query: 126 AALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARP------TGGAAAVAMLIGP---D 176
AL + +V S Y + + D+A RP T GA A ++G +
Sbjct: 120 EALQAAIGFVGSGM--AEYAMAIGADTA-----QGRPGDHLEFTAGAGGAAFIVGEKSNE 172
Query: 177 APIAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLS-QTCYLMALDSCYKYFCQKFEKL 235
+ FE S+++ DF++ YP + + + Y + + K ++
Sbjct: 173 SVAYFEGSY--SYVTDTPDFWR-RQHEHYPRHGNRFTGEPAYFHHIINAAKTLMEEL--- 226
Query: 236 EGRQFSMLDVDYFVFHSPYNKL 257
D DY VFH P K
Sbjct: 227 ---GLKPSDFDYAVFHQPNVKF 245
>sp|C5A401|Y461_THEGJ UPF0219 protein TGAM_0461 OS=Thermococcus gammatolerans (strain DSM
15229 / JCM 11827 / EJ3) GN=TGAM_0461 PE=3 SV=1
Length = 350
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 104/262 (39%), Gaps = 36/262 (13%)
Query: 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVT 66
+ VGI+ Y P + E + GVS + A ED +++ L
Sbjct: 9 REVGIVGYGAYVPMYRIKAEEIGRVWGVSS------FPIEEKAVPGLDEDALTIGLEAAR 62
Query: 67 SLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT-DIEGVDSTNACYGGT 125
+ L++ IDP I + GSE+ K ++K I E G T D+ D AC GT
Sbjct: 63 NALKRAGIDPKLIRAVWFGSES---KPYAVKPTGTVIAEAIGATPDVSTADFEFACKAGT 119
Query: 126 AALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARP------TGGAAAVAMLIGPDAPI 179
AL + +V S D Y + + D+A RP T GA A ++GP +
Sbjct: 120 EALQTAIGFVGSEMAD--YAMAIGADTA-----QGRPGDHLEFTAGAGGAAFIVGPKSSE 172
Query: 180 A---FESKLRGSHMSHAYDFYKPNLASEYPVVDGKLS-QTCYLMALDSCYKYFCQKFEKL 235
FE S+++ DF++ YP + + + Y + + K ++
Sbjct: 173 TVAYFEGSY--SYVTDTPDFWR-RQHEHYPRHGNRFTGEPAYFHHIINAAKTLMEEL--- 226
Query: 236 EGRQFSMLDVDYFVFHSPYNKL 257
++ D DY VFH P K
Sbjct: 227 ---GLTVNDFDYAVFHQPNVKF 245
>sp|A4WJ12|Y793_PYRAR UPF0219 protein Pars_0793 OS=Pyrobaculum arsenaticum (strain DSM
13514 / JCM 11321) GN=Pars_0793 PE=3 SV=1
Length = 349
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 100/235 (42%), Gaps = 27/235 (11%)
Query: 55 EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEG 114
ED +++++ + + IDP +IG + G+E+ K I + L+ N +
Sbjct: 49 EDAVTIAVEAARRAIRRAGIDPKKIGAVYAGTESKPYAVKPISSILVDALGLSNN--VFA 106
Query: 115 VDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARP-TGGAAAVAMLI 173
VD AC G+ L + V++ + YG+ V TD++ G + + VA+++
Sbjct: 107 VDMEFACKAGSEGLVAAIGLVKAGQVE--YGMTVGTDTSQGEPGEHLEYSASSGGVALIV 164
Query: 174 GPDAPIAFESKLRGSHMSHAYDFYKPNLASEYPV-VDGKLSQTCYLMALDSCYKYFCQKF 232
G D +A E + S++S DF++ S YP+ +G + Y + K +K+
Sbjct: 165 GRDG-VAAELEAVYSYVSDTPDFWRRE-GSPYPMHGEGFTGEPAYFRHIIGAAKGLMEKY 222
Query: 233 EKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAP 287
+ D Y VFH P + F A+S+ I EK+ P
Sbjct: 223 ------GYKPSDFAYVVFHQPNGR-------------FPVRAASMLNIPMEKIKP 258
>sp|B6YXH7|Y1301_THEON UPF0219 protein TON_1301 OS=Thermococcus onnurineus (strain NA1)
GN=TON_1301 PE=3 SV=1
Length = 350
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 105/262 (40%), Gaps = 36/262 (13%)
Query: 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVT 66
K+VGI+ Y P + E + GVS + A ED +++ +
Sbjct: 9 KDVGIVGYGAYVPKYRIKAEEIGRVWGVSS------FPIEEKAVPGLDEDALTIGIEAAR 62
Query: 67 SLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT-DIEGVDSTNACYGGT 125
+ L++ +IDP I + GSE+ K ++K I E G T D+ D AC GT
Sbjct: 63 NALKRARIDPKLIRAVWFGSES---KPYAVKPTGTVIAEAIGATPDVSTADFEFACKAGT 119
Query: 126 AALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARP------TGGAAAVAMLIGPDAPI 179
AL + +V S D Y + + D+A RP T GA A ++G +
Sbjct: 120 EALQTAIGFVGSGMAD--YAMAIGADTA-----QGRPGDHLEFTAGAGGAAFIVGEKSSE 172
Query: 180 A---FESKLRGSHMSHAYDFYKPNLASEYPVVDGKLS-QTCYLMALDSCYKYFCQKFEKL 235
FE S+++ DF++ YP + + + Y + + K ++
Sbjct: 173 TVAYFEGSY--SYVTDTPDFWR-RQHEHYPRHGNRFTGEPAYFHHIINAAKTLMEEL--- 226
Query: 236 EGRQFSMLDVDYFVFHSPYNKL 257
++ D DY VFH P K
Sbjct: 227 ---GLTVNDFDYAVFHQPNVKF 245
>sp|C6A2L5|Y799_THESM UPF0219 protein TSIB_0799 OS=Thermococcus sibiricus (strain MM 739
/ DSM 12597) GN=TSIB_0799 PE=3 SV=1
Length = 350
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 108/262 (41%), Gaps = 36/262 (13%)
Query: 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVT 66
K+VGI+ Y P + E + GV+ G + + ED I++ +
Sbjct: 9 KDVGIVGYGAYVPMFRIKNEEIGRVWGVN------GFPIQEKSVNNLDEDAITIGIEAAR 62
Query: 67 SLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT-DIEGVDSTNACYGGT 125
+ L++ +I+P +I L G+E+ K ++K I E G T D++ D AC GT
Sbjct: 63 NALKRARINPREIRALWFGTES---KPYAVKPSATVIAEAIGATPDLDAADFEFACKAGT 119
Query: 126 AALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARP------TGGAAAVAMLIG---PD 176
AL + +V S +Y + + D++ RP T A A ++G D
Sbjct: 120 EALQAAIGFVGSGM--AKYAMAIGADTS-----QGRPGDHLEFTASAGGAAYIVGEKTSD 172
Query: 177 APIAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLS-QTCYLMALDSCYKYFCQKFEKL 235
FE S+++ DF++ YP + + + Y + S K ++ +
Sbjct: 173 TLAYFEGSY--SYVTDTPDFWR-RQHEHYPRHGNRFTGEPAYFHQIISAAKGLMEELD-- 227
Query: 236 EGRQFSMLDVDYFVFHSPYNKL 257
+S D D+ VFH P K
Sbjct: 228 ----YSPSDFDFAVFHQPNVKF 245
>sp|Q6L233|Y384_PICTO UPF0219 protein PTO0384 OS=Picrophilus torridus (strain ATCC 700027
/ DSM 9790 / JCM 10055 / NBRC 100828) GN=PTO0384 PE=3
SV=1
Length = 351
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 92/221 (41%), Gaps = 22/221 (9%)
Query: 55 EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSET----VIDKSKSIKTFLMQIFEKYGNT 110
EDV ++S+ + L++ IDP IG + +GSE+ V + + + F +
Sbjct: 48 EDVATISVEAARNALKRSNIDPNDIGAIYIGSESHPYAVKPTATIVAAAIGMPFRTF--- 104
Query: 111 DIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARP-TGGAAAV 169
D AC GTAA+ N V+S +YG+ + +D++ A G A T A
Sbjct: 105 ---AADYEFACKAGTAAMQNIKAMVDSNMI--KYGMAIGSDTSQGAPGDALEYTASAGGT 159
Query: 170 AMLIGPDAPIAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLS-QTCYLMALDSCYKYF 228
AM+IG D IA +K S + DF++ YP + + + Y + +
Sbjct: 160 AMVIGRDNVIAEINKTI-SVATDTPDFWR-REGEPYPKHGERFTGEPGYFKHVIGAARDI 217
Query: 229 CQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFND 269
+ D DY VFH P K ++ L F +
Sbjct: 218 MSELNTKPD------DYDYVVFHQPNGKFPTRAAKILGFRE 252
>sp|Q46F10|Y551_METBF UPF0219 protein Mbar_A0551 OS=Methanosarcina barkeri (strain Fusaro
/ DSM 804) GN=Mbar_A0551 PE=3 SV=1
Length = 349
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 88/223 (39%), Gaps = 26/223 (11%)
Query: 55 EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEG 114
ED ++++ + + +DP +IG + GSE+ K T + Q N +
Sbjct: 49 EDAATIAVEAARYAMTRSGVDPERIGAVYTGSESHPYAVKPTSTIVSQAIGATPN--MTA 106
Query: 115 VDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARP-TGGAAAVAMLI 173
D AC GTAA+ C+ V S D G+ + D + A G A T A VA LI
Sbjct: 107 ADFEFACKAGTAAVQACMGLVSSGMID--LGMAIGADVSQGAPGDALEYTAAAGGVACLI 164
Query: 174 GPDAPIAFESKLRG------SHMSHAYDFYKPNLASEYPVVDGKLS-QTCYLMALDSCYK 226
G ES+L S + DF++ YP G+ + + Y + + K
Sbjct: 165 GKK-----ESELAAIIEDTYSFTTDTPDFWR-REGMPYPEHGGRFTGEPGYFKHVTNGAK 218
Query: 227 YFCQKF-EKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFN 268
K K E D DY VFH P K K+ L F
Sbjct: 219 GLLNKLGTKPE-------DYDYAVFHQPNGKFPTKAAKTLGFT 254
>sp|Q971K8|Y1349_SULTO UPF0219 protein STK_13490 OS=Sulfolobus tokodaii (strain DSM 16993
/ JCM 10545 / NBRC 100140 / 7) GN=STK_13490 PE=3 SV=1
Length = 348
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 96/220 (43%), Gaps = 19/220 (8%)
Query: 43 LGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQ 102
LG A S ED +M+ + L + KIDP++I + GSE+ + K T ++
Sbjct: 36 LGLMEKAVPSHDEDSTTMAWEAARNALMRAKIDPSEIKAVLFGSESKVYAVKPTSTIIID 95
Query: 103 ---IFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGP 159
I + + D+E AC + L VE+ +YGLV+ +D A G
Sbjct: 96 SLGISHETLSADLE-----FACRAASVGLRLLSGMVEANRI--KYGLVIGSDVAQSNPGD 148
Query: 160 A-RPTGGAAAVAMLIGPDAPIAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLS-QTCY 217
+ AA+VA ++GP + + S+ + DF++ + YP+ + + Y
Sbjct: 149 VLELSSAAASVAYIVGPADESSAIIEYATSYTTDMPDFWRRD-GMPYPLHGEAFTGEPAY 207
Query: 218 LMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKL 257
+ S + + EG +S+ D DYFVFH P K
Sbjct: 208 FAHIISAVQLLLK-----EG-GYSISDFDYFVFHQPNGKF 241
>sp|Q8PYJ0|Y871_METMA UPF0219 protein MM_0871 OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=MM_0871 PE=3 SV=1
Length = 349
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 90/223 (40%), Gaps = 26/223 (11%)
Query: 55 EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEG 114
ED ++++ + + + +DP++IG + GSE+ K T + Q +
Sbjct: 49 EDAATIAVEAARNAMIRSGVDPSRIGAVYTGSESHPYAVKPTSTIVAQAIGA--TPQMTA 106
Query: 115 VDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARP-TGGAAAVAMLI 173
D AC GTAA+ C+ V S D GL + D + A A T A VA LI
Sbjct: 107 ADFEFACKAGTAAVQACMGLVGSGMVD--LGLAIGADVSQGAPSDALEYTAAAGGVACLI 164
Query: 174 GPDAPIAFESKLRG------SHMSHAYDFYKPNLASEYPVVDGKLS-QTCYLMALDSCYK 226
G + ES+L S + DF++ YP G+ + + Y + + K
Sbjct: 165 GRN-----ESELAAIIEDTYSFTTDTPDFWR-REGMPYPEHGGRFTGEPGYFKHVTNGAK 218
Query: 227 YFCQKF-EKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFN 268
+K K E D DY VFH P K K+ L F
Sbjct: 219 GLLEKLGAKPE-------DYDYAVFHQPNGKFPSKAAKMLGFT 254
>sp|Q9YAS0|Y1873_AERPE UPF0219 protein APE_1873.1 OS=Aeropyrum pernix (strain ATCC 700893
/ DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=APE_1873.1
PE=3 SV=2
Length = 361
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 90/218 (41%), Gaps = 17/218 (7%)
Query: 55 EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIE- 113
ED +M + + + + ++DP IG + GSE+ K ++K I E G T +
Sbjct: 60 EDSTTMGVEAARNAIARARVDPASIGAVFFGSES---KPYAVKPSATIIAEALGITPVTM 116
Query: 114 GVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARP-TGGAAAVAML 172
D AC + + + V S Y LVV +D+A + G + + A A +
Sbjct: 117 ASDLEFACRAASEGMRASIGLVASGVVG--YTLVVGSDTAQASPGDVLEFSASSGAAAFV 174
Query: 173 IGPD--APIAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQ 230
IGP A FES ++++ DF++ L +G + Y ++S K +
Sbjct: 175 IGPSKGAAAVFESSF--TYVTDTPDFWRRGLKPYPSHGEGFTGEPAYFHHIESAVKGLFE 232
Query: 231 KFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFN 268
K S D DY +FH P K K +L F
Sbjct: 233 K------TGLSPGDFDYAIFHQPNGKFPVKVAKKLGFT 264
>sp|Q8TIV0|Y4041_METAC UPF0219 protein MA_4041 OS=Methanosarcina acetivorans (strain ATCC
35395 / DSM 2834 / JCM 12185 / C2A) GN=MA_4041 PE=3 SV=1
Length = 349
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 89/223 (39%), Gaps = 26/223 (11%)
Query: 55 EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEG 114
ED ++++ + + +DP++IG + GSE+ K T + Q ++
Sbjct: 49 EDAATIAVEAARYAMARSGVDPSRIGAVYTGSESHPYAVKPTSTIVAQAIG--ATPEMTA 106
Query: 115 VDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARP-TGGAAAVAMLI 173
D AC GTAA+ C+ V S D GL + D + A A T A VA LI
Sbjct: 107 ADFEFACKAGTAAVQACMGLVGSGMID--LGLAIGADVSQGAPSDALEYTAAAGGVACLI 164
Query: 174 GPDAPIAFESKLRG------SHMSHAYDFYKPNLASEYPVVDGKLS-QTCYLMALDSCYK 226
G ES+L S + DF++ YP G+ + + Y + + K
Sbjct: 165 GRK-----ESELAAIIEDTYSFTTDTPDFWR-REGMPYPEHGGRFTGEPGYFKHVTNGAK 218
Query: 227 YFCQKF-EKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFN 268
+K K E D DY VFH P K K+ L F
Sbjct: 219 GLLEKLGTKPE-------DYDYAVFHQPNGKFPSKAAKILGFT 254
>sp|Q5JFL6|Y181_PYRKO UPF0219 protein TK0181 OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=TK0181 PE=3 SV=1
Length = 350
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 108/266 (40%), Gaps = 44/266 (16%)
Query: 7 KNVGILALDIYFPPTCVLQEALEVHDGVS----KGKYTVGLGQDCMAFCSEVEDVISMSL 62
+ VGI+ Y P + E + GVS + K GL ED I++ +
Sbjct: 9 REVGIIGYGAYVPMYRIKAEEIGRVWGVSSFPIQEKSVPGLD----------EDTITIGI 58
Query: 63 TVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT-DIEGVDSTNAC 121
+ L++ +IDP I + +G+E+ K ++K I E G T D++ D AC
Sbjct: 59 EAARNALKRAQIDPKLIRAIWLGTES---KPYAVKPSGTVIAEAIGATPDLDAADFEFAC 115
Query: 122 YGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARP------TGGAAAVAMLIGP 175
GT A+ + +V S D Y + + D++ RP T A A ++ P
Sbjct: 116 KAGTEAIQAAIGFVGSGMAD--YAMAIGADTS-----QGRPGDHLEFTAAAGGAAYILAP 168
Query: 176 DAPIA---FESKLRGSHMSHAYDFYKPNLASEYPVVDGKLS-QTCYLMALDSCYKYFCQK 231
+ FE+ S+++ DF++ YP + + + Y + + K ++
Sbjct: 169 KSSETLAYFEASY--SYVTDTPDFWR-RQHEHYPRHGNRFTGEPAYFHQIINAAKTLMEE 225
Query: 232 FEKLEGRQFSMLDVDYFVFHSPYNKL 257
++ D DY VFH P K
Sbjct: 226 L------GYTPNDFDYAVFHQPNVKF 245
>sp|A6UPL1|Y526_METVS UPF0219 protein Mevan_0526 OS=Methanococcus vannielii (strain SB /
ATCC 35089 / DSM 1224) GN=Mevan_0526 PE=3 SV=1
Length = 349
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 102/266 (38%), Gaps = 14/266 (5%)
Query: 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVT 66
K VGI+ P + E + G GL + + ED ++++
Sbjct: 2 KEVGIVGYGSDLPKYRIKAEEIAKAWGKDAEAIKKGLVVNEKSVPGPDEDSATIAVQAAR 61
Query: 67 SLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTA 126
L + I+P IG + VGSE+ K + + + ++ D AC GTA
Sbjct: 62 RALSRSGINPKNIGAVYVGSESHPYAVKPTSGIVAEAVCT--SPEVTAADLEFACKAGTA 119
Query: 127 ALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIGPDAPIAFESKLR 186
+ C+ V S D Y + V D+A A G A AA A I +K
Sbjct: 120 GIQMCMGLVSSGMMD--YAMAVGVDTAQGAPGDALEYTAAAGGAAYIIGGKKEELIAKFN 177
Query: 187 G--SHMSHAYDFYKPNLASEYPVVDGKLS-QTCYLMALDSCYKYFCQKFEKLEGRQFSML 243
G S+ + DF++ YP G+ + + Y + S K +K + +
Sbjct: 178 GTYSYTTDTPDFWRRE-HEHYPKHGGRFTGEPAYFRHVLSAAKGMMEKMDT------TTK 230
Query: 244 DVDYFVFHSPYNKLVQKSFARLFFND 269
D DY VFH P K + +L FN+
Sbjct: 231 DYDYCVFHQPNGKFYLSAAKQLGFNE 256
>sp|A4FWW6|Y379_METM5 UPF0219 protein MmarC5_0379 OS=Methanococcus maripaludis (strain C5
/ ATCC BAA-1333) GN=MmarC5_0379 PE=3 SV=1
Length = 349
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 89/219 (40%), Gaps = 16/219 (7%)
Query: 55 EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYG-NTDIE 113
ED ++S+ L + I+P IG + VGSE+ ++K + E G + D
Sbjct: 50 EDTATISVQAARRALSRAGINPKDIGAVYVGSES---HPYAVKPTSGIVAEACGVSPDFT 106
Query: 114 GVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLI 173
D AC GTA + C+ V S + Y + V D+A A G A AA A I
Sbjct: 107 AADLEFACKAGTAGMQMCMGLVGSEMME--YAMAVGADTAQGAPGDALEYTAAAGGAAYI 164
Query: 174 GPDAPIAFESKLRG--SHMSHAYDFYKPNLASEYPVVDGKLS-QTCYLMALDSCYKYFCQ 230
F +K G S+ + DF++ YP G+ + + Y + + K
Sbjct: 165 IGAKKEEFIAKFNGTYSYTTDTPDFWRRE-HEHYPKHGGRFTGEPAYFKHVLNGAKGMMA 223
Query: 231 KFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFND 269
K + + D DY VFH P K + +L F +
Sbjct: 224 KMDT------TAKDYDYCVFHQPNGKFYISAAKQLGFTE 256
>sp|A0B8Z1|Y1390_METTP UPF0219 protein Mthe_1390 OS=Methanosaeta thermophila (strain DSM
6194 / PT) GN=Mthe_1390 PE=3 SV=1
Length = 345
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 94/235 (40%), Gaps = 27/235 (11%)
Query: 55 EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEG 114
ED ++++ + + + IDP +IG + GSE+ ++K + E G +
Sbjct: 48 EDTATIAVEAARNAISRANIDPHRIGAIYTGSES---HPYAVKPTGTIVGEAIGCSHSHT 104
Query: 115 V-DSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLI 173
V D AC GTAAL C+ V S D GL + D + A G A AA A +
Sbjct: 105 VADMEFACKAGTAALQACMGLVRSGMID--LGLAIGADVSQGAPGDALEYTAAAGGAAYV 162
Query: 174 GPDAPIAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLS-QTCYLMALDSCYKYFCQKF 232
A + E + S + DF++ YP G+ + + Y + S + +
Sbjct: 163 VGAADLIAEIEGTYSFTTDTPDFWR-REGIPYPEHGGRFTGEPAYFKHVMSAARGLMELL 221
Query: 233 EKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAP 287
K D DY VFH P K + A+L F KE++AP
Sbjct: 222 GK------KPEDYDYAVFHQPNGKFPVRVAAKLGFT-------------KEQIAP 257
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 126,823,350
Number of Sequences: 539616
Number of extensions: 5079446
Number of successful extensions: 13124
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 52
Number of HSP's that attempted gapping in prelim test: 12990
Number of HSP's gapped (non-prelim): 89
length of query: 354
length of database: 191,569,459
effective HSP length: 118
effective length of query: 236
effective length of database: 127,894,771
effective search space: 30183165956
effective search space used: 30183165956
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)