Query 018518
Match_columns 354
No_of_seqs 284 out of 1786
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 09:41:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018518.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018518hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02577 hydroxymethylglutaryl 100.0 9E-62 1.9E-66 479.5 29.5 339 6-347 2-343 (459)
2 COG0332 FabH 3-oxoacyl-[acyl-c 100.0 3.7E-61 8E-66 454.2 23.9 286 7-354 2-301 (323)
3 TIGR01833 HMG-CoA-S_euk 3-hydr 100.0 1.3E-58 2.8E-63 456.4 30.3 347 8-354 1-352 (454)
4 COG3425 PksG 3-hydroxy-3-methy 100.0 5.8E-52 1.3E-56 393.0 23.2 285 7-348 1-286 (377)
5 PRK12880 3-oxoacyl-(acyl carri 100.0 2.6E-51 5.6E-56 397.5 26.7 284 3-347 2-316 (353)
6 PRK05963 3-oxoacyl-(acyl carri 100.0 1.4E-49 2.9E-54 382.0 26.3 279 8-347 3-300 (326)
7 TIGR01835 HMG-CoA-S_prok 3-hyd 100.0 2.1E-49 4.6E-54 387.7 28.0 294 9-354 1-296 (379)
8 PRK07204 3-oxoacyl-(acyl carri 100.0 4.2E-47 9.1E-52 365.2 27.3 286 7-354 3-308 (329)
9 KOG1393 Hydroxymethylglutaryl- 100.0 7E-47 1.5E-51 351.6 26.5 348 3-354 6-355 (462)
10 CHL00203 fabH 3-oxoacyl-acyl-c 100.0 8.5E-47 1.8E-51 362.7 26.9 285 7-354 1-304 (326)
11 PLN02326 3-oxoacyl-[acyl-carri 100.0 1.3E-46 2.8E-51 368.4 27.2 285 7-354 46-358 (379)
12 PRK04262 hypothetical protein; 100.0 1.1E-46 2.5E-51 364.8 25.5 279 7-345 1-282 (347)
13 TIGR00748 HMG_CoA_syn_Arc hydr 100.0 5.8E-46 1.3E-50 359.3 26.4 278 8-345 1-281 (345)
14 PLN03169 chalcone synthase fam 100.0 2.4E-46 5.1E-51 367.1 23.8 278 6-347 19-359 (391)
15 PRK12879 3-oxoacyl-(acyl carri 100.0 1E-45 2.2E-50 354.7 27.0 286 7-354 3-303 (325)
16 PRK09258 3-oxoacyl-(acyl carri 100.0 1.2E-45 2.5E-50 356.3 25.6 286 5-354 2-317 (338)
17 cd00830 KAS_III Ketoacyl-acyl 100.0 2.2E-44 4.7E-49 344.3 26.4 285 8-354 1-301 (320)
18 cd00831 CHS_like Chalcone and 100.0 9.3E-45 2E-49 353.2 21.9 282 9-347 2-337 (361)
19 PRK06816 3-oxoacyl-(acyl carri 100.0 1.1E-44 2.5E-49 354.5 22.1 285 7-354 1-355 (378)
20 PRK06840 hypothetical protein; 100.0 6.9E-44 1.5E-48 344.2 26.8 280 7-347 3-309 (339)
21 PLN03171 chalcone synthase-lik 100.0 3.4E-44 7.4E-49 352.6 24.1 283 8-347 22-363 (399)
22 TIGR00747 fabH 3-oxoacyl-(acyl 100.0 1.6E-43 3.4E-48 338.6 27.0 281 7-347 1-292 (318)
23 PLN03168 chalcone synthase; Pr 100.0 4.5E-43 9.7E-48 343.4 22.3 279 8-345 15-350 (389)
24 PLN03172 chalcone synthase fam 100.0 2.2E-42 4.7E-47 338.6 25.0 279 8-345 16-351 (393)
25 PRK09352 3-oxoacyl-(acyl carri 100.0 8.2E-42 1.8E-46 326.8 26.9 281 7-347 2-292 (319)
26 PLN03173 chalcone synthase; Pr 100.0 5.4E-42 1.2E-46 335.6 22.9 279 8-346 16-352 (391)
27 PLN03170 chalcone synthase; Pr 100.0 9E-42 1.9E-46 335.2 21.6 277 8-345 20-355 (401)
28 cd00827 init_cond_enzymes "ini 100.0 7.5E-40 1.6E-44 313.5 25.4 280 8-347 1-300 (324)
29 PRK07515 3-oxoacyl-(acyl carri 100.0 9.9E-40 2.1E-44 319.1 25.5 279 8-345 2-345 (372)
30 PLN02932 3-ketoacyl-CoA syntha 100.0 3.5E-39 7.5E-44 319.6 24.5 292 5-354 64-432 (478)
31 PLN02854 3-ketoacyl-CoA syntha 100.0 4.6E-39 1E-43 320.5 24.7 290 5-354 110-472 (521)
32 PLN02377 3-ketoacyl-CoA syntha 100.0 5.9E-39 1.3E-43 319.7 23.7 292 5-354 94-456 (502)
33 COG3424 BcsA Predicted naringe 100.0 1.4E-38 3E-43 290.1 18.6 283 9-350 2-330 (356)
34 PLN02192 3-ketoacyl-CoA syntha 100.0 6.3E-37 1.4E-41 304.6 21.5 280 5-354 98-460 (511)
35 PLN00415 3-ketoacyl-CoA syntha 100.0 1.2E-34 2.5E-39 284.4 22.8 291 5-347 56-413 (466)
36 PF01154 HMG_CoA_synt_N: Hydro 100.0 9.2E-34 2E-38 243.4 14.0 173 5-177 1-173 (174)
37 PF00195 Chal_sti_synt_N: Chal 99.9 2.4E-27 5.3E-32 213.5 12.2 167 6-177 12-226 (226)
38 cd00327 cond_enzymes Condensin 99.9 2.1E-26 4.6E-31 212.6 17.2 210 57-347 7-223 (254)
39 cd00825 decarbox_cond_enzymes 99.9 5.3E-24 1.1E-28 204.3 14.5 221 57-347 11-283 (332)
40 PF08540 HMG_CoA_synt_C: Hydro 99.9 5.9E-23 1.3E-27 191.3 10.4 174 181-354 3-180 (282)
41 PF08392 FAE1_CUT1_RppA: FAE1/ 99.9 8.1E-21 1.8E-25 175.8 16.6 169 4-178 4-208 (290)
42 PRK06147 3-oxoacyl-(acyl carri 99.8 1.4E-18 2.9E-23 168.6 18.4 225 8-258 4-267 (348)
43 TIGR02845 spore_V_AD stage V s 99.8 6.7E-18 1.4E-22 158.5 17.4 222 8-267 9-247 (327)
44 PRK08304 stage V sporulation p 99.7 1.1E-15 2.3E-20 144.0 18.0 222 8-267 15-253 (337)
45 cd00834 KAS_I_II Beta-ketoacyl 99.6 4.7E-14 1E-18 139.2 20.7 225 8-261 2-311 (406)
46 cd00829 SCP-x_thiolase Thiolas 99.5 4.3E-13 9.2E-18 131.3 18.6 95 54-153 13-107 (375)
47 PRK06064 acetyl-CoA acetyltran 99.5 4.3E-13 9.4E-18 132.1 16.5 96 53-153 18-115 (389)
48 smart00825 PKS_KS Beta-ketoacy 99.5 3.1E-13 6.7E-18 134.4 15.2 113 58-176 88-245 (424)
49 PF08545 ACP_syn_III: 3-Oxoacy 99.5 3E-14 6.5E-19 108.9 5.3 61 115-177 1-65 (80)
50 PRK06158 thiolase; Provisional 99.5 1.9E-12 4.1E-17 127.3 17.7 101 39-149 11-111 (384)
51 cd00751 thiolase Thiolase are 99.5 2.2E-13 4.8E-18 134.0 10.6 96 54-153 19-114 (386)
52 TIGR01930 AcCoA-C-Actrans acet 99.4 6.3E-13 1.4E-17 130.7 11.1 96 54-153 18-113 (386)
53 PRK06501 3-oxoacyl-(acyl carri 99.4 9.6E-12 2.1E-16 123.9 19.3 227 7-261 11-325 (425)
54 PRK12404 stage V sporulation p 99.4 5.6E-12 1.2E-16 118.4 16.4 222 8-267 13-251 (334)
55 cd00828 elong_cond_enzymes "el 99.4 2.3E-11 5E-16 120.3 19.9 180 56-261 71-310 (407)
56 cd00833 PKS polyketide synthas 99.4 7.3E-12 1.6E-16 124.2 15.7 178 57-260 87-314 (421)
57 PRK05656 acetyl-CoA acetyltran 99.4 2.5E-12 5.3E-17 126.8 11.3 98 53-154 22-119 (393)
58 PRK08313 acetyl-CoA acetyltran 99.4 2.4E-12 5.1E-17 126.7 11.1 107 41-153 8-116 (386)
59 PRK12578 acetyl-CoA acetyltran 99.4 4.6E-12 1E-16 124.6 12.2 107 41-153 6-112 (385)
60 PF08541 ACP_syn_III_C: 3-Oxoa 99.3 9.1E-13 2E-17 102.8 5.1 67 237-354 3-69 (90)
61 PRK09051 beta-ketothiolase; Pr 99.3 6.3E-12 1.4E-16 123.9 11.3 97 53-153 23-120 (394)
62 PRK08235 acetyl-CoA acetyltran 99.3 5.9E-12 1.3E-16 124.1 11.1 98 53-154 22-119 (393)
63 PRK06205 acetyl-CoA acetyltran 99.3 4.9E-12 1.1E-16 125.1 10.6 96 54-153 23-118 (404)
64 PRK07108 acetyl-CoA acetyltran 99.3 5.5E-12 1.2E-16 124.2 10.8 98 53-154 23-121 (392)
65 PRK09052 acetyl-CoA acetyltran 99.3 9.7E-12 2.1E-16 122.7 11.5 97 54-154 28-126 (399)
66 PF02797 Chal_sti_synt_C: Chal 99.3 3.7E-12 7.9E-17 108.8 6.6 78 216-345 37-114 (151)
67 PRK06059 lipid-transfer protei 99.3 1.6E-11 3.5E-16 121.3 11.3 95 54-153 20-115 (399)
68 PRK08242 acetyl-CoA acetyltran 99.3 2.1E-11 4.7E-16 120.2 11.4 98 53-154 24-122 (402)
69 PRK05790 putative acyltransfer 99.3 2.6E-11 5.7E-16 119.6 11.4 96 54-153 23-118 (393)
70 PRK08170 acetyl-CoA acetyltran 99.2 3.6E-11 7.8E-16 119.8 11.3 96 54-153 24-119 (426)
71 PRK06065 acetyl-CoA acetyltran 99.2 4.3E-11 9.4E-16 117.8 11.2 107 39-152 12-120 (392)
72 PRK06690 acetyl-CoA acetyltran 99.2 3E-10 6.4E-15 110.6 16.4 90 55-153 23-112 (361)
73 TIGR03150 fabF beta-ketoacyl-a 99.2 4.2E-10 9.1E-15 111.3 17.8 225 8-260 2-310 (407)
74 cd00826 nondecarbox_cond_enzym 99.2 4.5E-11 9.8E-16 117.9 10.7 95 54-153 20-115 (393)
75 PRK06289 acetyl-CoA acetyltran 99.2 9.3E-11 2E-15 116.1 10.6 94 53-153 22-120 (403)
76 PRK06954 acetyl-CoA acetyltran 99.2 9.7E-11 2.1E-15 115.6 10.6 97 54-154 28-124 (397)
77 PF00108 Thiolase_N: Thiolase, 99.1 2.7E-10 5.9E-15 106.4 10.9 98 53-154 22-119 (264)
78 PRK07516 acetyl-CoA acetyltran 99.1 3.6E-10 7.8E-15 111.4 11.7 107 41-153 7-115 (389)
79 PRK07103 polyketide beta-ketoa 99.1 1.2E-09 2.6E-14 108.4 15.0 176 57-261 80-317 (410)
80 PRK07661 acetyl-CoA acetyltran 99.1 3.9E-10 8.4E-15 111.1 11.1 97 54-154 24-121 (391)
81 PLN02287 3-ketoacyl-CoA thiola 99.1 4.4E-10 9.5E-15 112.4 11.3 97 53-153 67-164 (452)
82 PRK07314 3-oxoacyl-(acyl carri 99.1 3.6E-09 7.7E-14 105.0 17.0 227 7-261 2-312 (411)
83 PRK05952 3-oxoacyl-(acyl carri 99.1 1.9E-08 4.2E-13 98.7 20.2 223 7-261 2-290 (381)
84 PRK07851 acetyl-CoA acetyltran 99.0 1.1E-09 2.5E-14 108.4 11.2 95 54-153 24-120 (406)
85 PRK09185 3-oxoacyl-(acyl carri 99.0 9.8E-09 2.1E-13 101.3 17.3 138 94-261 137-296 (392)
86 PRK06445 acetyl-CoA acetyltran 99.0 1.1E-09 2.3E-14 108.2 9.9 94 54-153 29-125 (394)
87 PRK06333 3-oxoacyl-(acyl carri 99.0 1.7E-08 3.6E-13 100.6 18.4 177 57-260 82-323 (424)
88 PRK08722 3-oxoacyl-(acyl carri 99.0 4.8E-08 1E-12 97.1 20.2 227 7-261 4-314 (414)
89 PRK08256 lipid-transfer protei 99.0 2.1E-09 4.5E-14 106.1 10.0 92 54-153 19-110 (391)
90 PRK06157 acetyl-CoA acetyltran 98.9 4.5E-09 9.7E-14 103.9 11.1 95 54-153 24-118 (398)
91 PRK08963 fadI 3-ketoacyl-CoA t 98.9 3.9E-09 8.5E-14 105.2 10.1 98 53-154 25-122 (428)
92 PLN02836 3-oxoacyl-[acyl-carri 98.9 2.1E-08 4.6E-13 100.4 15.4 177 57-260 93-334 (437)
93 PRK08439 3-oxoacyl-(acyl carri 98.9 2.6E-08 5.6E-13 98.8 15.7 163 7-176 2-242 (406)
94 PRK08131 acetyl-CoA acetyltran 98.9 5.9E-09 1.3E-13 103.0 10.9 97 54-154 23-120 (401)
95 PRK06366 acetyl-CoA acetyltran 98.9 7.1E-09 1.5E-13 102.1 11.2 96 55-154 24-119 (388)
96 PRK06365 acetyl-CoA acetyltran 98.9 8.5E-09 1.8E-13 102.9 11.1 109 40-153 20-129 (430)
97 PRK07850 acetyl-CoA acetyltran 98.9 8.6E-09 1.9E-13 101.5 11.0 97 54-154 23-120 (387)
98 PTZ00050 3-oxoacyl-acyl carrie 98.9 2.5E-08 5.4E-13 99.3 13.9 176 56-258 76-317 (421)
99 PLN02644 acetyl-CoA C-acetyltr 98.9 1.2E-08 2.6E-13 100.7 11.5 96 54-153 22-117 (394)
100 PRK06633 acetyl-CoA acetyltran 98.9 6E-09 1.3E-13 102.6 9.2 97 54-154 24-120 (392)
101 PTZ00455 3-ketoacyl-CoA thiola 98.9 1.4E-08 3E-13 101.4 11.6 98 54-153 45-150 (438)
102 PRK09050 beta-ketoadipyl CoA t 98.9 1E-08 2.3E-13 101.3 10.5 97 54-154 23-121 (401)
103 TIGR02446 FadI fatty oxidation 98.9 9.1E-09 2E-13 102.6 9.9 97 54-154 28-124 (430)
104 PRK13359 beta-ketoadipyl CoA t 98.9 1.5E-08 3.3E-13 100.1 10.9 96 55-154 24-121 (400)
105 PRK09116 3-oxoacyl-(acyl carri 98.8 8.2E-08 1.8E-12 95.2 15.3 222 7-259 2-309 (405)
106 TIGR02430 pcaF beta-ketoadipyl 98.8 2E-08 4.4E-13 99.2 10.4 97 54-154 22-120 (400)
107 PRK06504 acetyl-CoA acetyltran 98.8 2.9E-08 6.2E-13 97.8 11.2 97 54-154 23-120 (390)
108 PLN02787 3-oxoacyl-[acyl-carri 98.8 8E-08 1.7E-12 98.1 14.3 226 7-260 129-440 (540)
109 cd00832 CLF Chain-length facto 98.8 2.5E-07 5.3E-12 91.6 16.2 223 8-261 2-306 (399)
110 PRK08142 acetyl-CoA acetyltran 98.8 5E-08 1.1E-12 96.1 10.9 103 40-152 9-111 (388)
111 PRK14691 3-oxoacyl-(acyl carri 98.8 1.8E-07 3.9E-12 90.6 14.6 177 57-261 4-242 (342)
112 PRK08947 fadA 3-ketoacyl-CoA t 98.7 4.1E-08 9E-13 96.7 10.1 96 54-153 24-121 (387)
113 PRK06519 3-oxoacyl-(acyl carri 98.7 4.5E-07 9.7E-12 89.6 15.9 220 5-261 4-315 (398)
114 PRK09268 acetyl-CoA acetyltran 98.7 9E-08 2E-12 95.4 11.1 97 54-154 28-124 (427)
115 TIGR02445 fadA fatty oxidation 98.7 5E-08 1.1E-12 96.0 9.0 96 54-153 22-119 (385)
116 PRK07801 acetyl-CoA acetyltran 98.7 1.1E-07 2.4E-12 93.5 10.0 95 55-153 24-119 (382)
117 PRK08257 acetyl-CoA acetyltran 98.6 2.1E-07 4.5E-12 94.5 11.9 107 41-153 9-119 (498)
118 PRK07910 3-oxoacyl-(acyl carri 98.6 1.1E-06 2.5E-11 87.4 16.2 226 7-261 12-322 (418)
119 PRK07855 lipid-transfer protei 98.6 2.1E-07 4.6E-12 91.6 10.7 100 41-150 9-108 (386)
120 PF00109 ketoacyl-synt: Beta-k 98.6 2.4E-07 5.3E-12 85.5 10.4 114 57-176 87-251 (254)
121 PRK06066 acetyl-CoA acetyltran 98.6 3.3E-07 7.1E-12 90.1 11.3 104 41-152 9-114 (385)
122 PRK07967 3-oxoacyl-(acyl carri 98.6 3.2E-06 6.9E-11 83.9 17.3 163 7-176 2-242 (406)
123 PRK06025 acetyl-CoA acetyltran 98.5 9.7E-07 2.1E-11 87.3 11.6 97 54-154 26-123 (417)
124 PF07451 SpoVAD: Stage V sporu 98.4 2.8E-05 6.1E-10 72.6 17.8 182 57-268 51-249 (329)
125 PRK07937 lipid-transfer protei 98.3 2.3E-06 4.9E-11 83.3 8.7 104 41-153 7-113 (352)
126 COG0304 FabB 3-oxoacyl-(acyl-c 98.3 2.6E-05 5.7E-10 77.1 15.2 179 56-261 70-312 (412)
127 KOG1406 Peroxisomal 3-ketoacyl 98.2 1.9E-06 4.1E-11 78.5 6.1 109 37-153 7-117 (408)
128 TIGR02813 omega_3_PfaA polyket 98.2 2.7E-05 5.9E-10 91.8 15.6 75 96-176 185-281 (2582)
129 COG3321 Polyketide synthase mo 98.0 0.00017 3.7E-09 79.5 17.0 172 60-261 94-319 (1061)
130 COG0183 PaaJ Acetyl-CoA acetyl 97.8 8.6E-05 1.9E-09 73.4 9.2 94 57-154 27-123 (392)
131 KOG1394 3-oxoacyl-(acyl-carrie 97.3 0.0013 2.8E-08 62.7 9.5 228 6-261 23-337 (440)
132 KOG1390 Acetyl-CoA acetyltrans 97.3 0.00073 1.6E-08 63.5 7.1 96 54-153 27-122 (396)
133 KOG1391 Acetyl-CoA acetyltrans 96.9 0.0016 3.5E-08 59.5 5.4 97 53-154 24-122 (396)
134 PRK06025 acetyl-CoA acetyltran 96.7 0.0024 5.2E-08 63.4 5.3 73 223-347 319-394 (417)
135 KOG1389 3-oxoacyl CoA thiolase 95.6 0.027 5.8E-07 53.0 6.1 95 54-153 58-153 (435)
136 KOG1392 Acetyl-CoA acetyltrans 95.5 0.011 2.4E-07 54.9 3.1 93 57-153 66-158 (465)
137 PF08541 ACP_syn_III_C: 3-Oxoa 95.2 0.038 8.2E-07 42.5 4.8 73 69-151 1-78 (90)
138 PF13723 Ketoacyl-synt_2: Beta 94.5 0.52 1.1E-05 42.8 11.1 116 56-178 33-172 (218)
139 PRK06205 acetyl-CoA acetyltran 94.1 0.21 4.6E-06 49.6 8.3 77 22-107 265-341 (404)
140 PRK06366 acetyl-CoA acetyltran 93.4 0.29 6.4E-06 48.3 7.9 113 22-147 252-370 (388)
141 PRK08242 acetyl-CoA acetyltran 93.4 0.41 9E-06 47.5 8.9 125 22-175 267-401 (402)
142 TIGR00748 HMG_CoA_syn_Arc hydr 92.6 0.36 7.9E-06 46.8 7.1 82 57-149 206-293 (345)
143 PRK07850 acetyl-CoA acetyltran 92.4 1.1 2.4E-05 44.3 10.4 125 22-175 252-386 (387)
144 PRK08257 acetyl-CoA acetyltran 92.4 0.68 1.5E-05 47.3 9.1 120 22-149 250-382 (498)
145 PRK09051 beta-ketothiolase; Pr 92.3 0.63 1.4E-05 46.1 8.5 41 61-106 294-334 (394)
146 PRK07661 acetyl-CoA acetyltran 92.2 0.44 9.5E-06 47.2 7.3 80 60-147 290-374 (391)
147 PRK06147 3-oxoacyl-(acyl carri 92.0 0.38 8.1E-06 46.8 6.5 90 60-151 235-330 (348)
148 PRK06816 3-oxoacyl-(acyl carri 91.8 1.1 2.5E-05 43.9 9.7 85 59-153 272-366 (378)
149 PF02803 Thiolase_C: Thiolase, 91.6 0.7 1.5E-05 38.1 6.7 79 61-147 24-107 (123)
150 PRK13359 beta-ketoadipyl CoA t 91.6 0.93 2E-05 45.0 8.8 93 61-175 298-399 (400)
151 PRK12879 3-oxoacyl-(acyl carri 91.4 0.68 1.5E-05 44.1 7.5 80 61-150 227-311 (325)
152 cd00751 thiolase Thiolase are 91.4 0.99 2.1E-05 44.5 8.8 42 60-106 286-327 (386)
153 PRK09052 acetyl-CoA acetyltran 91.3 0.83 1.8E-05 45.3 8.2 96 60-175 298-398 (399)
154 PRK07204 3-oxoacyl-(acyl carri 91.0 0.63 1.4E-05 44.6 6.9 80 60-149 231-315 (329)
155 PRK08235 acetyl-CoA acetyltran 91.0 0.82 1.8E-05 45.3 7.7 72 60-136 292-368 (393)
156 CHL00203 fabH 3-oxoacyl-acyl-c 90.8 0.78 1.7E-05 44.0 7.3 79 61-149 228-311 (326)
157 PRK09050 beta-ketoadipyl CoA t 90.7 1.4 3E-05 43.8 9.0 42 61-107 299-340 (401)
158 PRK05790 putative acyltransfer 90.5 1.6 3.5E-05 43.0 9.4 80 61-148 293-377 (393)
159 TIGR02430 pcaF beta-ketoadipyl 90.4 1 2.2E-05 44.7 7.9 42 61-107 298-339 (400)
160 PRK07851 acetyl-CoA acetyltran 90.3 0.68 1.5E-05 46.0 6.5 79 61-147 305-388 (406)
161 PRK05656 acetyl-CoA acetyltran 90.3 1.7 3.7E-05 43.0 9.3 41 61-106 293-333 (393)
162 PRK09258 3-oxoacyl-(acyl carri 90.0 1.4 3E-05 42.4 8.2 82 59-150 239-325 (338)
163 PRK06690 acetyl-CoA acetyltran 89.7 2.6 5.6E-05 41.3 9.9 76 60-147 259-343 (361)
164 cd00825 decarbox_cond_enzymes 89.5 1.6 3.4E-05 41.6 8.1 77 59-138 205-286 (332)
165 PLN02287 3-ketoacyl-CoA thiola 89.5 1.7 3.8E-05 43.8 8.7 99 61-177 333-436 (452)
166 PRK05963 3-oxoacyl-(acyl carri 89.4 1.3 2.8E-05 42.4 7.4 83 58-150 226-313 (326)
167 PRK06840 hypothetical protein; 89.0 1.8 3.9E-05 41.6 8.2 81 60-150 238-322 (339)
168 PRK07108 acetyl-CoA acetyltran 88.9 0.98 2.1E-05 44.7 6.3 76 60-147 291-375 (392)
169 PRK08256 lipid-transfer protei 88.9 1.8 3.8E-05 42.8 8.2 42 222-269 267-308 (391)
170 cd00327 cond_enzymes Condensin 88.6 3.6 7.9E-05 37.3 9.6 77 57-138 143-226 (254)
171 TIGR02445 fadA fatty oxidation 88.5 3.1 6.7E-05 41.1 9.5 42 61-107 282-323 (385)
172 TIGR01930 AcCoA-C-Actrans acet 88.3 2.5 5.4E-05 41.7 8.7 41 61-106 288-328 (386)
173 PRK06445 acetyl-CoA acetyltran 88.1 3.1 6.7E-05 41.2 9.3 80 61-148 294-378 (394)
174 PLN02326 3-oxoacyl-[acyl-carri 87.8 2.4 5.2E-05 41.7 8.3 79 61-149 282-365 (379)
175 PRK07937 lipid-transfer protei 87.5 3.7 8E-05 40.0 9.3 77 22-108 212-291 (352)
176 PRK06289 acetyl-CoA acetyltran 87.2 2.1 4.6E-05 42.5 7.6 43 60-107 277-319 (403)
177 KOG1202 Animal-type fatty acid 86.8 1.7 3.6E-05 48.3 6.7 177 57-258 87-309 (2376)
178 cd00830 KAS_III Ketoacyl-acyl 86.8 2 4.4E-05 40.6 7.0 82 59-150 223-309 (320)
179 PRK09352 3-oxoacyl-(acyl carri 86.8 2.3 4.9E-05 40.4 7.3 81 60-150 220-305 (319)
180 PRK09268 acetyl-CoA acetyltran 86.7 1 2.2E-05 45.1 5.1 65 22-87 272-337 (427)
181 TIGR00747 fabH 3-oxoacyl-(acyl 86.7 3.2 6.9E-05 39.4 8.3 81 59-149 219-304 (318)
182 PRK04262 hypothetical protein; 86.7 1.2 2.7E-05 43.0 5.5 91 59-174 209-307 (347)
183 PRK06954 acetyl-CoA acetyltran 86.2 1.3 2.8E-05 43.9 5.4 41 222-268 298-338 (397)
184 PRK08947 fadA 3-ketoacyl-CoA t 85.7 5.6 0.00012 39.3 9.6 79 61-147 284-370 (387)
185 COG3425 PksG 3-hydroxy-3-methy 85.6 4.9 0.00011 39.3 8.9 96 57-174 207-307 (377)
186 PRK08142 acetyl-CoA acetyltran 85.5 2.1 4.6E-05 42.3 6.5 80 22-108 218-299 (388)
187 PRK06633 acetyl-CoA acetyltran 85.5 2.2 4.8E-05 42.2 6.7 80 60-147 291-375 (392)
188 PRK12578 acetyl-CoA acetyltran 84.8 2.9 6.3E-05 41.1 7.2 80 22-107 217-300 (385)
189 PRK06059 lipid-transfer protei 84.3 7.6 0.00017 38.4 9.9 42 61-107 275-316 (399)
190 PRK07515 3-oxoacyl-(acyl carri 83.9 2 4.3E-05 42.0 5.5 83 59-150 271-358 (372)
191 PRK06504 acetyl-CoA acetyltran 83.9 3.6 7.7E-05 40.7 7.3 45 58-107 287-331 (390)
192 PLN02644 acetyl-CoA C-acetyltr 83.7 4.3 9.2E-05 40.2 7.8 42 61-107 293-334 (394)
193 PTZ00455 3-ketoacyl-CoA thiola 82.7 4.5 9.8E-05 40.7 7.6 80 22-107 266-352 (438)
194 PRK06066 acetyl-CoA acetyltran 82.5 4.7 0.0001 39.8 7.5 80 22-107 218-301 (385)
195 COG0332 FabH 3-oxoacyl-[acyl-c 82.0 2.2 4.7E-05 41.1 4.7 83 57-149 221-308 (323)
196 PRK06064 acetyl-CoA acetyltran 81.8 7.3 0.00016 38.4 8.6 43 60-107 259-301 (389)
197 PF02801 Ketoacyl-synt_C: Beta 81.5 1.4 3E-05 35.7 2.9 80 59-139 25-111 (119)
198 PRK07801 acetyl-CoA acetyltran 81.1 3 6.4E-05 41.1 5.5 39 224-268 285-323 (382)
199 PRK08313 acetyl-CoA acetyltran 81.0 6.7 0.00015 38.7 8.0 80 22-107 216-300 (386)
200 PRK06065 acetyl-CoA acetyltran 81.0 9.8 0.00021 37.7 9.2 80 22-107 224-307 (392)
201 PRK08963 fadI 3-ketoacyl-CoA t 80.8 9.1 0.0002 38.3 9.0 29 59-87 309-337 (428)
202 PRK06158 thiolase; Provisional 80.7 4.7 0.0001 39.7 6.8 45 59-108 254-298 (384)
203 PRK07516 acetyl-CoA acetyltran 80.6 6.2 0.00013 38.9 7.6 44 59-107 260-303 (389)
204 TIGR01835 HMG-CoA-S_prok 3-hyd 80.2 3.8 8.3E-05 40.3 6.0 97 59-175 205-315 (379)
205 cd00829 SCP-x_thiolase Thiolas 79.2 7.2 0.00016 38.0 7.6 44 59-107 251-294 (375)
206 PRK06157 acetyl-CoA acetyltran 78.3 8.9 0.00019 38.0 7.9 80 22-107 224-311 (398)
207 cd00826 nondecarbox_cond_enzym 77.3 4.7 0.0001 39.9 5.7 42 61-107 271-312 (393)
208 PRK06365 acetyl-CoA acetyltran 75.1 12 0.00026 37.5 7.9 43 60-107 294-338 (430)
209 TIGR02446 FadI fatty oxidation 74.3 10 0.00022 38.1 7.2 25 62-86 314-338 (430)
210 KOG1390 Acetyl-CoA acetyltrans 74.3 3.3 7.1E-05 39.5 3.4 39 224-268 299-337 (396)
211 cd00831 CHS_like Chalcone and 73.7 7.3 0.00016 37.8 5.9 81 59-149 259-349 (361)
212 PRK07910 3-oxoacyl-(acyl carri 73.0 20 0.00043 35.8 8.9 46 60-106 287-333 (418)
213 PRK14691 3-oxoacyl-(acyl carri 72.8 11 0.00024 36.6 6.8 48 58-106 205-253 (342)
214 PRK07855 lipid-transfer protei 72.2 6.6 0.00014 38.7 5.2 43 61-108 268-310 (386)
215 KOG1394 3-oxoacyl-(acyl-carrie 67.9 5.7 0.00012 38.6 3.5 61 44-106 287-348 (440)
216 PRK08131 acetyl-CoA acetyltran 67.6 11 0.00023 37.5 5.6 42 60-106 297-338 (401)
217 PRK07314 3-oxoacyl-(acyl carri 66.7 11 0.00023 37.3 5.4 78 61-140 278-361 (411)
218 PRK06519 3-oxoacyl-(acyl carri 66.1 19 0.00042 35.7 7.0 45 60-106 281-326 (398)
219 cd00834 KAS_I_II Beta-ketoacyl 66.1 11 0.00025 36.8 5.5 80 59-140 275-360 (406)
220 cd00827 init_cond_enzymes "ini 66.1 17 0.00037 34.3 6.5 85 57-151 221-314 (324)
221 cd00832 CLF Chain-length facto 64.6 20 0.00043 35.5 6.8 79 58-140 269-353 (399)
222 cd00828 elong_cond_enzymes "el 63.5 14 0.0003 36.4 5.5 79 59-139 274-358 (407)
223 PF02803 Thiolase_C: Thiolase, 63.0 24 0.00052 29.0 5.9 40 223-268 26-65 (123)
224 PRK09185 3-oxoacyl-(acyl carri 62.9 16 0.00035 36.0 5.8 75 61-140 262-342 (392)
225 PF02801 Ketoacyl-synt_C: Beta 62.0 40 0.00086 27.0 7.1 35 221-261 27-61 (119)
226 PLN02787 3-oxoacyl-[acyl-carri 61.3 23 0.0005 36.7 6.8 77 61-140 407-489 (540)
227 TIGR03150 fabF beta-ketoacyl-a 60.5 26 0.00055 34.4 6.8 46 60-106 276-322 (407)
228 TIGR01796 CM_mono_aroH monofun 58.9 21 0.00045 29.1 4.7 58 57-119 14-76 (117)
229 PTZ00050 3-oxoacyl-acyl carrie 58.0 32 0.00069 34.2 7.0 81 59-140 283-370 (421)
230 PF07736 CM_1: Chorismate muta 57.5 15 0.00032 30.0 3.6 47 65-118 26-75 (118)
231 PRK12880 3-oxoacyl-(acyl carri 57.0 30 0.00066 33.6 6.5 78 59-149 242-324 (353)
232 COG0304 FabB 3-oxoacyl-(acyl-c 56.5 31 0.00068 34.4 6.6 46 59-105 276-322 (412)
233 PRK05952 3-oxoacyl-(acyl carri 55.5 28 0.0006 34.3 6.0 77 59-140 254-336 (381)
234 PRK06501 3-oxoacyl-(acyl carri 54.4 38 0.00081 33.8 6.8 79 60-140 290-374 (425)
235 PRK08722 3-oxoacyl-(acyl carri 54.2 48 0.001 33.0 7.5 80 60-140 279-364 (414)
236 PRK09116 3-oxoacyl-(acyl carri 53.7 37 0.00079 33.7 6.6 46 59-105 275-321 (405)
237 smart00825 PKS_KS Beta-ketoacy 52.7 56 0.0012 32.2 7.8 47 59-106 279-326 (424)
238 cd00833 PKS polyketide synthas 51.9 51 0.0011 32.3 7.3 82 58-140 278-367 (421)
239 PRK06333 3-oxoacyl-(acyl carri 48.5 49 0.0011 32.8 6.6 46 59-105 288-334 (424)
240 PLN03169 chalcone synthase fam 48.4 50 0.0011 32.6 6.5 80 62-149 284-374 (391)
241 PRK09604 UGMP family protein; 46.9 50 0.0011 31.9 6.2 29 58-86 52-80 (332)
242 cd02185 AroH Chorismate mutase 46.0 35 0.00075 27.8 4.1 59 57-119 14-76 (117)
243 PLN02836 3-oxoacyl-[acyl-carri 45.4 72 0.0016 31.9 7.3 46 59-105 299-345 (437)
244 PRK08170 acetyl-CoA acetyltran 44.7 24 0.00052 35.3 3.7 25 61-85 309-333 (426)
245 COG1214 Inactive homolog of me 42.5 75 0.0016 28.8 6.2 62 55-118 35-96 (220)
246 PRK07103 polyketide beta-ketoa 40.9 64 0.0014 32.0 6.1 29 61-89 283-312 (410)
247 KOG1406 Peroxisomal 3-ketoacyl 40.6 35 0.00076 31.9 3.7 46 58-108 271-316 (408)
248 PRK09585 anmK anhydro-N-acetyl 39.5 75 0.0016 31.2 6.1 49 57-106 69-125 (365)
249 PRK14878 UGMP family protein; 37.3 1.1E+02 0.0024 29.3 6.9 27 60-86 47-73 (323)
250 TIGR00329 gcp_kae1 metallohydr 36.3 45 0.00098 31.7 4.0 29 58-86 49-77 (305)
251 COG0533 QRI7 Metal-dependent p 35.5 65 0.0014 31.2 4.9 83 60-153 53-138 (342)
252 TIGR01991 HscA Fe-S protein as 34.8 1.4E+02 0.003 31.4 7.6 45 60-106 294-338 (599)
253 PRK05183 hscA chaperone protei 34.8 1.3E+02 0.0029 31.6 7.5 44 61-106 311-354 (616)
254 TIGR02177 PorB_KorB 2-oxoacid: 34.3 1.9E+02 0.0041 27.4 7.8 20 60-79 11-30 (287)
255 TIGR03725 bact_YeaZ universal 33.7 51 0.0011 29.2 3.7 31 56-86 32-62 (202)
256 COG4126 Hydantoin racemase [Am 31.6 3.8E+02 0.0082 24.5 8.7 106 13-139 113-219 (230)
257 PRK13410 molecular chaperone D 31.1 1.1E+02 0.0024 32.6 6.2 47 58-106 308-354 (668)
258 PLN02854 3-ketoacyl-CoA syntha 30.3 2.2E+02 0.0049 29.4 8.0 81 61-149 387-479 (521)
259 PTZ00186 heat shock 70 kDa pre 29.8 1.3E+02 0.0028 32.0 6.4 45 60-106 335-379 (657)
260 KOG2707 Predicted metalloprote 29.1 59 0.0013 31.7 3.4 28 62-90 87-114 (405)
261 PF01890 CbiG_C: Cobalamin syn 28.3 59 0.0013 26.5 2.9 56 41-106 4-59 (121)
262 KOG2708 Predicted metalloprote 28.1 1E+02 0.0022 28.4 4.5 84 60-153 52-136 (336)
263 PLN03171 chalcone synthase-lik 27.5 2.3E+02 0.005 28.0 7.5 86 57-150 277-381 (399)
264 PLN03184 chloroplast Hsp70; Pr 27.5 1.3E+02 0.0027 32.2 5.9 46 59-106 346-391 (673)
265 PF00814 Peptidase_M22: Glycop 26.8 40 0.00087 31.4 1.9 29 58-86 30-58 (268)
266 PRK07027 cobalamin biosynthesi 26.5 55 0.0012 26.9 2.4 57 40-106 5-61 (126)
267 TIGR03722 arch_KAE1 universal 26.3 70 0.0015 30.6 3.5 26 61-86 49-74 (322)
268 PRK08304 stage V sporulation p 26.2 3.5E+02 0.0076 26.3 8.1 87 62-153 211-312 (337)
269 PLN03170 chalcone synthase; Pr 26.1 2.4E+02 0.0052 27.9 7.3 66 60-132 282-354 (401)
270 PRK00290 dnaK molecular chaper 25.9 1.5E+02 0.0032 31.3 6.0 46 59-106 307-352 (627)
271 TIGR03723 bact_gcp putative gl 25.9 89 0.0019 29.9 4.1 59 57-119 49-109 (314)
272 PF00195 Chal_sti_synt_N: Chal 25.5 1.5E+02 0.0033 27.0 5.3 32 238-269 115-150 (226)
273 cd01453 vWA_transcription_fact 24.8 3.3E+02 0.0073 23.5 7.3 89 56-152 24-117 (183)
274 TIGR02350 prok_dnaK chaperone 24.5 1.4E+02 0.0031 31.0 5.7 46 59-106 305-350 (595)
275 PTZ00340 O-sialoglycoprotein e 24.4 1.1E+02 0.0023 29.9 4.3 57 59-119 51-109 (345)
276 PLN03173 chalcone synthase; Pr 24.4 2.5E+02 0.0055 27.7 7.1 42 60-106 278-319 (391)
277 KOG1391 Acetyl-CoA acetyltrans 23.9 76 0.0017 29.7 3.0 40 62-106 296-335 (396)
278 CHL00094 dnaK heat shock prote 23.9 1.8E+02 0.0039 30.6 6.3 46 59-106 309-354 (621)
279 COG4401 AroH Chorismate mutase 23.5 1.6E+02 0.0034 23.8 4.3 60 59-122 18-81 (125)
280 PF12633 Adenyl_cycl_N: Adenyl 22.6 2.4E+02 0.0052 25.4 5.8 20 327-346 173-192 (204)
281 PTZ00009 heat shock 70 kDa pro 22.5 1.7E+02 0.0037 31.0 5.8 44 61-106 315-358 (653)
282 cd01458 vWA_ku Ku70/Ku80 N-ter 22.4 5.4E+02 0.012 22.7 8.9 82 55-137 23-121 (218)
283 PRK13411 molecular chaperone D 22.1 1.6E+02 0.0034 31.3 5.4 45 60-106 309-353 (653)
284 PRK12404 stage V sporulation p 21.1 2.4E+02 0.0051 27.4 5.8 26 222-253 59-84 (334)
285 PF03702 UPF0075: Uncharacteri 21.1 1.1E+02 0.0024 30.0 3.8 49 57-106 66-124 (364)
286 PF05872 DUF853: Bacterial pro 20.5 53 0.0012 33.2 1.4 21 325-345 165-185 (502)
287 PRK12342 hypothetical protein; 20.4 3.1E+02 0.0067 25.5 6.3 28 79-106 110-137 (254)
288 TIGR03285 methan_mark_14 putat 20.1 1E+02 0.0023 30.1 3.2 34 53-86 61-94 (445)
No 1
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=100.00 E-value=9e-62 Score=479.48 Aligned_cols=339 Identities=84% Similarity=1.316 Sum_probs=300.6
Q ss_pred CcceEEeEEEEEcCCccccHHHHHHhhCCCcchheeccccEEEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEe
Q 018518 6 PKNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVG 85 (354)
Q Consensus 6 ~~~v~I~~ig~~lP~~~v~~e~l~~~~~~~~~~~~~gig~r~~~~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~ 85 (354)
+++++|.++|.|+|+++|+|+++++.+|.+++|+.+||++|++.+++++|++.+||++|+++||+++|++|++||+||++
T Consensus 2 ~~~vgI~gig~Y~P~~~v~n~eLa~~~g~~~~~~~~GI~~r~~ava~~~Ed~~tmA~~AA~~aL~~agid~~~Idlliva 81 (459)
T PLN02577 2 PKNVGILAMEVYFPPTCVQQEALEAHDGVSKGKYTIGLGQDCMAFCTDVEDVISMSLTVVKSLLEKYNIDPKQIGRLEVG 81 (459)
T ss_pred CCccEEEEEEEeCCCeEEcHHHHHHHhCCCHHHHhhccceeEeccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 56899999999999999999999999999999998999999988888999999999999999999999999999999999
Q ss_pred cccCCCCCCCHHHHHH---HHhcCcCCCCeeEEeecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeeccccCCCCCCc
Q 018518 86 SETVIDKSKSIKTFLM---QIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARP 162 (354)
Q Consensus 86 t~t~~~~~P~~a~~l~---~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~~~~~~~~~~ 162 (354)
|+||++..|+++++|+ ++||. +++.+||++++|+||++||.+|..||++|.+++++||||++|..++.....+.
T Consensus 82 TeT~~d~~ps~A~~v~~ll~~LG~---~~~~afDi~~AC~G~~~AL~~A~~~i~sg~~~~~~aLVV~aD~a~~~~~~~e~ 158 (459)
T PLN02577 82 SETVIDKSKSIKTFLMQLFEESGN---TDIEGVDSTNACYGGTAALLNCVNWVESSSWDGRYGLVVAADSAVYAEGPARP 158 (459)
T ss_pred cCCCCCCCCchHHHHHHHHHHhCC---CCcEEeehhhhhHHHHHHHHHHHHHHHcCCCCCCeEEEEEechhhccCCCCCC
Confidence 9999999999999997 55565 78999999999999999999999999998645699999999999776556678
Q ss_pred cccceeEEEEEccCCCceeeecceeecccccccccccCCCCccccccCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCc
Q 018518 163 TGGAAAVAMLIGPDAPIAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSM 242 (354)
Q Consensus 163 lfGDGAaA~lL~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~ 242 (354)
++||||+|+||+++++..++....++++.+.+|||+|.++..++.|||++++++|++.++.++++++++.+...+.|+++
T Consensus 159 t~GdGA~A~lv~~~~~~~l~~~~~g~~~~~~~Df~rP~~~~~~~~vdG~~s~~~yl~~~~~~~~~~~~k~~~~~~~g~~~ 238 (459)
T PLN02577 159 TGGAGAVAMLVGPNAPIVFESKYRGSHMAHVYDFYKPDLASEYPVVDGKLSQTCYLMALDSCYKRFCEKYEKLEGKQFSI 238 (459)
T ss_pred CCCcceEEEEEccCCCceeecccccccCcccchhcccCCCCCceEEcchHHHHHHHHHHHHHHHHHHHHhhcccccCCCH
Confidence 89999999999987665555445568888899999998777789999999999999999999999998875333347899
Q ss_pred cCcceeeccccchHHHHHHHHHhcchhhhcccCchhhHHhhhcCCCCCCCccccccchHHHHHHHHHHHHHHHhhccccc
Q 018518 243 LDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPST 322 (354)
Q Consensus 243 ~did~~v~Hq~n~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~~s~ 322 (354)
+||||++||||+.+|+++..++|.++++.+....+++..+++++++..++-++++.|++++|.+.+..++.|.+|+.+++
T Consensus 239 ~d~d~~vfHqP~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~ 318 (459)
T PLN02577 239 SDADYFVFHAPYNKLVQKSFARLVYNDFQRNASSVDEDAKEKLAPFAGLSSDESYQNRDLEKVSQQVAKPLYDAKVQPTT 318 (459)
T ss_pred HHcCEEEecCCccchhHHHHHHHhhhhhhhccccccchhhhccccccccchhhccccchHHHHHHHhhHHHHHHhhccHh
Confidence 99999999999999999999999877644332222333455566777888899999999999999999999999999999
Q ss_pred ccccccCccchhHHHhHHHhhhccc
Q 018518 323 LIPKQVGNMYTASLYAAFASLLHEK 347 (354)
Q Consensus 323 ~~~~~~GN~~saSi~~~L~~~l~~~ 347 (354)
.+.+++|||||||+|++|+++|++.
T Consensus 319 ~~~~~vGN~YTaSlyl~L~SlL~~~ 343 (459)
T PLN02577 319 LIPKQVGNMYTASLYAALASLVHNK 343 (459)
T ss_pred HHHHhcCcccchHHHHHHHHHHhhc
Confidence 9999999999999999999999765
No 2
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=100.00 E-value=3.7e-61 Score=454.17 Aligned_cols=286 Identities=20% Similarity=0.203 Sum_probs=253.3
Q ss_pred cceEEeEEEEEcCCccccHHHHHHhhCCCcchheeccccEEEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEec
Q 018518 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGS 86 (354)
Q Consensus 7 ~~v~I~~ig~~lP~~~v~~e~l~~~~~~~~~~~~~gig~r~~~~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t 86 (354)
++++|.|+|.|+|+++++|+++++..+++++|+.+.+|.|+||++.++|+.++|+++|+++||+++|++|+|||+||++|
T Consensus 2 ~~a~i~g~G~~lP~~~vtn~d~e~~~~tsdewI~~rtGir~R~~a~~~e~~s~la~~Aa~~AL~~Agi~~~dIDlII~aT 81 (323)
T COG0332 2 MNAKILGIGSYLPERVVTNADLEKRVDTSDEWIETRTGIRERRIAADDETTSDLAVEAARKALEDAGISPDDIDLIIVAT 81 (323)
T ss_pred CcceEEEEEeecCCcccChHHHHhccCCCcceeeeecCCceeeecCCCccHHHHHHHHHHHHHHHcCCCHHHCCEEEEEc
Confidence 57899999999999999999999999999999998888889999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeecc----ccCCCCCCc
Q 018518 87 ETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA----VYAEGPARP 162 (354)
Q Consensus 87 ~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~----~~~~~~~~~ 162 (354)
+||++..|++|+.||++||+ .++.+||++.+|+||++||.+|..+|++|.+ |+||||++|++ ++.||.++.
T Consensus 82 ~tpd~~~Ps~A~~vq~~LG~---~~~~afDl~aaCsgf~yaL~~A~~~i~sG~~--k~vLVVg~e~~S~~ld~~dR~t~v 156 (323)
T COG0332 82 STPDHLFPSTACLVQARLGL---GGAPAFDLQAACSGFLYALSVADGLIRSGGY--KNVLVVGAETLSRILDWTDRDTCV 156 (323)
T ss_pred CCcccCCChHHHHHHHHhCC---CCcceeechhhhHHHHHHHHHHHHHHHcCCC--CEEEEEehhHhhccCCHhhccceE
Confidence 99999999999999999999 6699999999999999999999999999987 99999999998 466788999
Q ss_pred cccceeEEEEEccCC-CceeeecceeecccccccccccCCC---------CccccccCcchHHHHHHHHHHHHHHHHHHH
Q 018518 163 TGGAAAVAMLIGPDA-PIAFESKLRGSHMSHAYDFYKPNLA---------SEYPVVDGKLSQTCYLMALDSCYKYFCQKF 232 (354)
Q Consensus 163 lfGDGAaA~lL~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~---------~~~~~~~G~~~~~~~~~~~~~~~~~~l~~~ 232 (354)
+|||||+|+||++.+ ...+....+++++......+.+.++ ..++.|+|+.+|+...+.+.+++++++++.
T Consensus 157 lFgDGAgAvvl~~~~~~~~i~~~~l~sdg~~~~~l~~~~~~~~~~~~~~~~~~~~m~Gr~vfk~av~~~~~~~~~~L~~~ 236 (323)
T COG0332 157 LFGDGAGAVVLEATEDDNGILDTDLGSDGSQGDLLYLPGGGSATPKEESGGGLLVMDGREVFKFAVRAMPKAIEEVLEKA 236 (323)
T ss_pred EEcCCceEEEEecCCCCcCeeeeeeeccccCCCeeeccCCCCccccccccccceeeccHHHHHHHHHHHHHHHHHHHHHc
Confidence 999999999999986 4455544566776655333444321 135689999988877788888888888876
Q ss_pred HhhhcCCCCccCcceeeccccchHHHHHHHHHhcchhhhcccCchhhHHhhhcCCCCCCCccccccchHHHHHHHHHHHH
Q 018518 233 EKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQ 312 (354)
Q Consensus 233 ~~~~~~g~~~~did~~v~Hq~n~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 312 (354)
|++++|||||+|||+|.||++.+.++|++++
T Consensus 237 ------~l~~~dId~~vpHQan~ri~~~i~~~l~~~~------------------------------------------- 267 (323)
T COG0332 237 ------GLTPEDIDWFVPHQANLRIIEAIAKKLGIPE------------------------------------------- 267 (323)
T ss_pred ------CCCHHHCCEEccccccHHHHHHHHHHcCCCH-------------------------------------------
Confidence 6999999999999999999999999999752
Q ss_pred HHHhhcccccccccccCccchhHHHhHHHhhhcccCccccCC
Q 018518 313 LYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLVSG 354 (354)
Q Consensus 313 ~~~~k~~~s~~~~~~~GN~~saSi~~~L~~~l~~~~~~~~~~ 354 (354)
+|+..++ ++|||||+||||++|.++++++ .+++|
T Consensus 268 ---~k~~~~~---~~yGNtsaAsiplaL~~~~~~g--~ik~G 301 (323)
T COG0332 268 ---EKVVVTV---DKYGNTSAASIPLALDEALREG--RIKPG 301 (323)
T ss_pred ---HHHhhHH---HHhcccccchHHHHHHHHhhhC--CCCCC
Confidence 7777664 7999999999999999999998 77765
No 3
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=100.00 E-value=1.3e-58 Score=456.43 Aligned_cols=347 Identities=66% Similarity=1.073 Sum_probs=304.5
Q ss_pred ceEEeEEEEEcCCccccHHHHHHhhCCCcchheeccccEEEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecc
Q 018518 8 NVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSE 87 (354)
Q Consensus 8 ~v~I~~ig~~lP~~~v~~e~l~~~~~~~~~~~~~gig~r~~~~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~ 87 (354)
+|+|.++++|+|+++|+|+++++..|.+++|+.+||++|+++++.++|++.+||++|++++|++++++|++||+||++|.
T Consensus 1 ~vgI~~ig~y~P~~~v~~~eLa~~~g~~~~k~~~GI~~rr~av~~~~Ed~~tma~~AA~~lL~~a~id~~~Id~Liv~Te 80 (454)
T TIGR01833 1 DVGILALEIYFPSQYVDQAELEKYDGVSAGKYTIGLGQTKMGFCTDREDINSLCLTVVSKLMERYNIDYNQIGRLEVGTE 80 (454)
T ss_pred CcEEEEEEEeCCCeEEcHHHHHHhcCCCHHHheechhheecccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECC
Confidence 58999999999999999999999999999999999999998899999999999999999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeeccccCCCCCCccccce
Q 018518 88 TVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARPTGGAA 167 (354)
Q Consensus 88 t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~~~~~~~~~~lfGDG 167 (354)
|+++..|+++++|++.||+.|.+++.+||++++|+||++||.+|..||+++.+++++||||++|+.+|.+.+..+++|||
T Consensus 81 S~~d~sps~a~~v~~lL~~lG~~~~~~fDi~~AC~G~t~AL~~A~~~i~s~~~~~~~aLVV~sDia~y~~~~~~~t~GaG 160 (454)
T TIGR01833 81 TIIDKSKSVKTVLMQLFEESGNTDVEGIDTTNACYGGTAALFNAINWIESSSWDGRYALVVAGDIAVYAKGNARPTGGAG 160 (454)
T ss_pred CCCCCCCchHHHHHHHHHhcCCCCceEEeccccchhHHHHHHHHHHHHHcCCcCCCeEEEEEeccccccCCCeeeccccc
Confidence 99999999999999987755558899999999999999999999999999865579999999999999887778899999
Q ss_pred eEEEEEccCCCceeeecceeecccccccccccCCCCccccccCcchHHHHHHHHHHHHHHHHHHHHhhhc-----CCCCc
Q 018518 168 AVAMLIGPDAPIAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEG-----RQFSM 242 (354)
Q Consensus 168 AaA~lL~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~~-----~g~~~ 242 (354)
|+|+||++++++.++....++++.+.+|||+|....+++.+||+++..+|.+++..++..+.++....++ .|.++
T Consensus 161 AvAmLv~~~~~~~~~~~~~~~~~~~~~DF~rP~~~~~~p~vdg~~S~~~Yl~a~~~~y~~y~~~~~~a~~~~~~~~~~~~ 240 (454)
T TIGR01833 161 AVAMLIGPNAPIVFERGLRGSHMQHAYDFYKPDLASEYPVVDGKLSIQCYLSALDRCYKSYCKKIEKQWGKSGGDRKFTL 240 (454)
T ss_pred eEEEEeccCccceecCccceEEEeecccccCCCCCCcccccCCccCHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCH
Confidence 9999999987755564346788889999999986566899999999999999999999998777642211 25788
Q ss_pred cCcceeeccccchHHHHHHHHHhcchhhhcccCchhhHHhhhcCCCCCCCccccccchHHHHHHHHHHHHHHHhhccccc
Q 018518 243 LDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPST 322 (354)
Q Consensus 243 ~did~~v~Hq~n~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~~s~ 322 (354)
+|+|+++||+|+.+|+++...++.+++..+.+.-+++..++.++++.+++.++.+.|+++++.|.+..++.+.+|+.+++
T Consensus 241 ~dfd~~~fH~P~~km~~ka~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~ 320 (454)
T TIGR01833 241 NDFDYMVFHSPYCKLVQKSLARLLYNDFLRNPSSIDTALYEGLEALSTLKLEDTYFDRDLEKAFMKASKELFDKKTKPSL 320 (454)
T ss_pred hHcCEEeccCCcccHHHHHHHHHHHhhhhhccccccchhhcccchhhccccccccchhhHHHHHHhhhhhhHHHhhcchh
Confidence 99999999999999999998888655544333222223355566788899999999999999999999999999999999
Q ss_pred ccccccCccchhHHHhHHHhhhcccCccccCC
Q 018518 323 LIPKQVGNMYTASLYAAFASLLHEKHSSLVSG 354 (354)
Q Consensus 323 ~~~~~~GN~~saSi~~~L~~~l~~~~~~~~~~ 354 (354)
.+.+++|||||||+|++|+++|++..+..+.|
T Consensus 321 ~~~~~vGN~YtaSlyl~L~Sll~~~~~~~~~g 352 (454)
T TIGR01833 321 LVPNQVGNMYTASLYGCLASLLSSKSAQELAG 352 (454)
T ss_pred HHHHhcCchhhhHHHHHHHHHHhhCCccccCC
Confidence 99999999999999999999998765544444
No 4
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=100.00 E-value=5.8e-52 Score=392.96 Aligned_cols=285 Identities=36% Similarity=0.559 Sum_probs=267.4
Q ss_pred cceEEeEEEEEcCCccccHHHHHHhhCCCcchheeccccEEEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEec
Q 018518 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGS 86 (354)
Q Consensus 7 ~~v~I~~ig~~lP~~~v~~e~l~~~~~~~~~~~~~gig~r~~~~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t 86 (354)
|+++|.+++.|+|..+|+.+|+++.++.+++++..|+|+.++++++.+|++.+||++||+++|.++++||++|++|+++|
T Consensus 1 ~~iGI~~~g~y~p~~~i~~~ela~~~g~d~~k~~~gl~~~e~sv~~~~ED~vTmaveAA~~~l~r~~~D~~~Ig~v~vgT 80 (377)
T COG3425 1 MMIGIVGIGAYIPRYRIKLEELARAWGVDPEKIKKGLGVEEKSVPPWDEDAVTMAVEAARNALKRADIDPSKIGAVIVGS 80 (377)
T ss_pred CccccceEEEeccceEeeHHHHHhhcCCChHHhhhccccccccCCCCchhHHHHHHHHHHHHHhccCCCHHHCceEEEec
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeeccccCCC-CCCcccc
Q 018518 87 ETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEG-PARPTGG 165 (354)
Q Consensus 87 ~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~~~~~~-~~~~lfG 165 (354)
+|+++..++++.+|++.||+ ++++.++|+.++|.+++.||+.|..|+.+|.. +++|||++|+..+.+. ..+.++|
T Consensus 81 ES~~d~~K~~at~v~~~lg~--~~~~~~~d~~~AC~agT~aL~~a~~~v~s~~~--~~~LvI~sD~a~~~~~~~~E~t~G 156 (377)
T COG3425 81 ESGPDAVKPTATIVAEALGL--NPSARAADVEFACYAGTAALQAAIGWVESGMI--SYGLVIGADTAQYAPGDALEYTAG 156 (377)
T ss_pred CCCcccccchHHHHHHHhCC--CCceehhhHHHHHHHHHHHHHHHHHHHHcCCc--cceEEEeehhhccCCCcccCccCC
Confidence 99999999999999999999 78999999999999999999999999999965 8999999999998877 4689999
Q ss_pred ceeEEEEEccCCCceeeecceeecccccccccccCCCCccccccCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccCc
Q 018518 166 AAAVAMLIGPDAPIAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDV 245 (354)
Q Consensus 166 DGAaA~lL~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~di 245 (354)
+||+|+||++++....+....++++.+.+|||+|.+. .++..+|+++...|.+++..+++.++++. |++++|+
T Consensus 157 AGavA~lIg~n~~~~a~~~~~~syt~d~~DFwRp~~~-~yp~~dg~~s~~~Y~~~~~~a~~~~~~k~------gls~~df 229 (377)
T COG3425 157 AGAVAFLIGKNPPIVAEFEGTGSYTTDTPDFWRPDGQ-PYPYVDGRFSEPAYFKHVENAAKGYMEKT------GLSPDDF 229 (377)
T ss_pred CceEEEEEccCCCeEEEecCceEEecCCCcccccCCC-cccccCceecHHHHHHHHHHHHHHHHHHh------CCChhhh
Confidence 9999999999866544444678999999999999865 78999999999999999999999999997 5999999
Q ss_pred ceeeccccchHHHHHHHHHhcchhhhcccCchhhHHhhhcCCCCCCCccccccchHHHHHHHHHHHHHHHhhcccccccc
Q 018518 246 DYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIP 325 (354)
Q Consensus 246 d~~v~Hq~n~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~~s~~~~ 325 (354)
|+++|||||.+|..++++.|+++. +++.+++.+.
T Consensus 230 dy~vfH~P~~k~~~ka~k~l~~~~----------------------------------------------e~v~~~l~~~ 263 (377)
T COG3425 230 DYIVFHQPNGKFPKKAAKSLGFKE----------------------------------------------EQVKPGLVYP 263 (377)
T ss_pred CeEEecCCCCchHHHHHHHhCccH----------------------------------------------hhcCccchhh
Confidence 999999999999999999999641 8999999999
Q ss_pred cccCccchhHHHhHHHhhhcccC
Q 018518 326 KQVGNMYTASLYAAFASLLHEKH 348 (354)
Q Consensus 326 ~~~GN~~saSi~~~L~~~l~~~~ 348 (354)
+++|||||||++++|+++|++..
T Consensus 264 ~~vGN~YtgS~~L~Las~L~~a~ 286 (377)
T COG3425 264 QRIGNTYTGSLLLGLASLLDNAK 286 (377)
T ss_pred hhcCcccchhHHHHHHHHHhhcC
Confidence 99999999999999999999875
No 5
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=2.6e-51 Score=397.47 Aligned_cols=284 Identities=20% Similarity=0.162 Sum_probs=231.7
Q ss_pred CCCCcceEEeEEEEEcCCccccHHHHHH-hhCCC---cchheeccccEEEeecCCCCCHHHHHHHHHHHHHHHcCCCcCC
Q 018518 3 SWHPKNVGILALDIYFPPTCVLQEALEV-HDGVS---KGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQ 78 (354)
Q Consensus 3 ~~~~~~v~I~~ig~~lP~~~v~~e~l~~-~~~~~---~~~~~~gig~r~~~~~~~~e~~~~La~~Aa~~aL~~ag~~~~d 78 (354)
..++++++|.++|+|+|+++++|+++.. .++.+ .+++...+|+++|+++.+++++.+||++|+++||+++|++++|
T Consensus 2 ~~~~~~~~I~~~g~~lP~~~v~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~d 81 (353)
T PRK12880 2 KTRFDKAKISGICVSVPEHKICIDDELESVFSNDIKTLKRMKKVIGLNTRYICDENTCVSDLGKHAANTLLQGLNIDKNS 81 (353)
T ss_pred cccccccEEEEEEEECCCeEecHHHHHHHhcCcchhhhhhhhhccCceEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHH
Confidence 5678899999999999999999997544 44321 1235567888888898889999999999999999999999999
Q ss_pred cCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeeccc----
Q 018518 79 IGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV---- 154 (354)
Q Consensus 79 Id~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~~---- 154 (354)
||+||++|+||++..|+++++|+++||+ ++++.+||+++||+||++||.+|..++++|.. + +|||++|.++
T Consensus 82 Id~lI~~t~t~d~~~P~~a~~v~~~Lg~--~~~~~~~di~~~C~g~~~aL~~A~~~i~~~~~--~-~LVv~~e~~S~~~~ 156 (353)
T PRK12880 82 LDALIVVTQSPDFFMPSTACYLHQLLNL--SSKTIAFDLGQACAGYLYGLFVAHSLIQSGLG--K-ILLICGDTLSKFIH 156 (353)
T ss_pred CCEEEEEcCCCCCCCCcHHHHHHHHhCC--CCCceEEehhhhhHHHHHHHHHHHHHHHcCCC--C-EEEEEehhhhccCC
Confidence 9999999999999999999999999999 56899999999999999999999999999954 8 9999999872
Q ss_pred cCCCCCCccccceeEEEEEccCCC-ceeeecceeecccccccccccCCCC----------------------ccccccCc
Q 018518 155 YAEGPARPTGGAAAVAMLIGPDAP-IAFESKLRGSHMSHAYDFYKPNLAS----------------------EYPVVDGK 211 (354)
Q Consensus 155 ~~~~~~~~lfGDGAaA~lL~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~----------------------~~~~~~G~ 211 (354)
+.++.+..+|||||+|+||++++. ..+. ...+++........|.++. .+..|+|+
T Consensus 157 ~~d~~~~~lFGDGAaA~vl~~~~~~~~~~--~~~~~~~~~~~~~~p~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 234 (353)
T PRK12880 157 PKNMNLAPIFGDGVSATLIEKTDFNEAFF--ELGSDGKYFDKLIIPKGAMRIPKADIFNDDSLMQTEEFRQLENLYMDGA 234 (353)
T ss_pred cccCCceeeecccceEEEEEecCCCCceE--EEEecCCCCCeEEecCCCcCCCccccccccccccccccccCceEEEcCH
Confidence 444456789999999999987542 1111 2233333222233332211 12357888
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhhhcCCCCccCcceeeccccchHHHHHHHHHhcchhhhcccCchhhHHhhhcCCCCCC
Q 018518 212 LSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTL 291 (354)
Q Consensus 212 ~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~did~~v~Hq~n~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l 291 (354)
.+++.+.+.++.+++.+++++ |++.+|||+|++||+|.+|++.+.++|++++
T Consensus 235 ~v~~~~~~~~~~~i~~~L~~~------gl~~~did~~v~HQ~~~~i~~~i~~~Lgl~~---------------------- 286 (353)
T PRK12880 235 NIFNMALECEPKSFKEILEFS------KVDEKDIAFHLFHQSNAYLVDCIKEELKLND---------------------- 286 (353)
T ss_pred HHHHHHHHHHHHHHHHHHHHc------CCCHHHCCEEEECCCCHHHHHHHHHHhCCCH----------------------
Confidence 888888888888888988886 6999999999999999999999999999852
Q ss_pred CccccccchHHHHHHHHHHHHHHHhhcccccccccccCccchhHHHhHHHhhhccc
Q 018518 292 SDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEK 347 (354)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~k~~~s~~~~~~~GN~~saSi~~~L~~~l~~~ 347 (354)
+|+.. .++++||||+|||||++|.++++++
T Consensus 287 ------------------------ek~~~--~~l~~~GNtssasip~~L~~~~~~~ 316 (353)
T PRK12880 287 ------------------------DKVPN--FIMEKYANLSACSLPALLCELDTPK 316 (353)
T ss_pred ------------------------HHhhh--hhHHhhCCHHHHHHHHHHHHHHHcC
Confidence 67642 2347999999999999999998765
No 6
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=1.4e-49 Score=381.97 Aligned_cols=279 Identities=18% Similarity=0.147 Sum_probs=232.4
Q ss_pred ceEEeEEEEEcCCccccHHHHHHhhCCCcchheeccccEEEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecc
Q 018518 8 NVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSE 87 (354)
Q Consensus 8 ~v~I~~ig~~lP~~~v~~e~l~~~~~~~~~~~~~gig~r~~~~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~ 87 (354)
+++|.++|+|+|+++++|+++.+.++.+++|+...+|+++|+++.+++++.+||++|+++||+++|++|+|||+||++|+
T Consensus 3 ~~~I~~~g~~lP~~~v~~~~~~~~~~~~~~~i~~~~Gi~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~~Id~li~~t~ 82 (326)
T PRK05963 3 SSRIAGFGHAVPDRRVENAEIEAQLGLETGWIERRTGIRCRRWAAPDETLSDLAASAGDMALSDAGIERSDIALTLLATS 82 (326)
T ss_pred ccEEEEEEEECCCCeecHHHHHHHcCCCHHHhhhccCCeEEEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECC
Confidence 57999999999999999999999999988898888899999999899999999999999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeeccc----cCCCCCCcc
Q 018518 88 TVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV----YAEGPARPT 163 (354)
Q Consensus 88 t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~~----~~~~~~~~l 163 (354)
+|++..|+++++|+++||+ +++.+||++++|+|+++||++|..+++++ . ++||||++|.+. +.++.+..+
T Consensus 83 ~~d~~~p~~a~~v~~~Lg~---~~~~~~di~~~C~g~~~aL~~A~~~l~~~--~-~~aLVv~~d~~s~~~~~~~~~~~~l 156 (326)
T PRK05963 83 TPDHLLPPSAPLLAHRLGL---QNSGAIDLAGACAGFLYALVLADGFVRAQ--G-KPVLVVAANILSRRINMAERASAVL 156 (326)
T ss_pred CCCCCCCcHHHHHHHHhCC---CCCceeeccchhhHHHHHHHHHHHHHHcC--C-CeEEEEEechhhccCCccccCceEE
Confidence 9999999999999999999 56889999999999999999999999987 3 899999999873 223446789
Q ss_pred ccceeEEEEEccCCC--ceeeecceeecccccccccccCCCCc------------cc-cccCcchHHHHHHHHHHHHHHH
Q 018518 164 GGAAAVAMLIGPDAP--IAFESKLRGSHMSHAYDFYKPNLASE------------YP-VVDGKLSQTCYLMALDSCYKYF 228 (354)
Q Consensus 164 fGDGAaA~lL~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~------------~~-~~~G~~~~~~~~~~~~~~~~~~ 228 (354)
|||||+|+||++++. ..+....+.+++..+..+..|.++.. ++ .++|+..++.+.+.+.++++.+
T Consensus 157 fGDgA~A~ll~~~~~~~~~~l~~~~~t~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (326)
T PRK05963 157 FADAAGAVVLAPSAKANSGVLGSQLISDGSHYDLIKIPAGGSARPFAPERDASEFLMTMQDGRAVFTEAVRMMSGASQNV 236 (326)
T ss_pred EeecceEEEEEecCCCCCceEEEEEEEcCCCCCeEEeCCCCcCCCCcccccccccceEecCCHHHHHHHHHHHHHHHHHH
Confidence 999999999998653 23332234454443333333332211 11 1367777777777777788888
Q ss_pred HHHHHhhhcCCCCccCcceeeccccchHHHHHHHHHhcchhhhcccCchhhHHhhhcCCCCCCCccccccchHHHHHHHH
Q 018518 229 CQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQ 308 (354)
Q Consensus 229 l~~~~~~~~~g~~~~did~~v~Hq~n~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 308 (354)
+++. |++++|||+|+|||+|.++++.+.++|+++.
T Consensus 237 L~~~------gl~~~did~~~~h~~~~~~~~~~~~~l~l~~--------------------------------------- 271 (326)
T PRK05963 237 LASA------AMTPQDIDRFFPHQANARIVDKVCETIGIPR--------------------------------------- 271 (326)
T ss_pred HHHc------CCCHHHCCEEEeCCCCHHHHHHHHHHcCCCH---------------------------------------
Confidence 8775 6999999999999999999999999999752
Q ss_pred HHHHHHHhhcccccccccccCccchhHHHhHHHhhhccc
Q 018518 309 VAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEK 347 (354)
Q Consensus 309 ~~~~~~~~k~~~s~~~~~~~GN~~saSi~~~L~~~l~~~ 347 (354)
+|+..++ ++||||+|||+|++|.++++++
T Consensus 272 -------~k~~~~l---~~~Gn~~sas~~~~L~~~~~~~ 300 (326)
T PRK05963 272 -------AKAASTL---ETYGNSSAATIPLSLSLANLEQ 300 (326)
T ss_pred -------HHhhhhH---HhhCcHHHHHHHHHHHHHHHhC
Confidence 6665543 7999999999999999988765
No 7
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=100.00 E-value=2.1e-49 Score=387.67 Aligned_cols=294 Identities=29% Similarity=0.466 Sum_probs=247.4
Q ss_pred eEEeEEEEEcCCccccHHHHHHhhCCCcchheeccccEEEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEeccc
Q 018518 9 VGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSET 88 (354)
Q Consensus 9 v~I~~ig~~lP~~~v~~e~l~~~~~~~~~~~~~gig~r~~~~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t 88 (354)
|+|.++++|+|+++++++++++..|.+++|+..|+|+++|++++++|++.+|+++|+++||+++ +|++||+||++|+|
T Consensus 1 iGI~~i~~y~P~~~v~~~ela~~~g~~~~~~~~g~G~~~~~~~~~~ed~~~la~~Aa~~aL~~a--~~~~Id~li~~t~s 78 (379)
T TIGR01835 1 IGIDKISFFTPQNYLDMTALAEARGVDPEKFHIGIGQKKMAVPPIDEDIVTMAASAAKPILDRN--DKQKIDMVIFGTES 78 (379)
T ss_pred CCEeEEEEECCCEEeeHHHHHHHhCCCHHHHHhhcCceEEeeCCCCCCHHHHHHHHHHHHHHhC--CHhhCCEEEEEeCC
Confidence 5899999999999999999999999999999999999999999999999999999999999998 89999999999999
Q ss_pred CCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeeccccCCC-CCCccccce
Q 018518 89 VIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEG-PARPTGGAA 167 (354)
Q Consensus 89 ~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~~~~~~-~~~~lfGDG 167 (354)
+++..|+++.+|++.||+ ++++.++|++++|+|+++||.+|..++++|.. ++||||++|.+++... ..+.+||||
T Consensus 79 ~~~~~~s~a~~v~~~Lgl--~~~~~~~dv~~aC~gg~~aL~~A~~~i~s~~~--~~aLVv~~D~a~~~~~~~~~~~~GdG 154 (379)
T TIGR01835 79 GIDQSKAAAVYVHGLLGL--QPFCRSFELKQACYGATAALQMAKGHVALSPD--RKVLVIASDIAKYGLESPGEPTQGAG 154 (379)
T ss_pred CCCCCCCHHHHHHHHhCC--CCCceEEEeccccHHHHHHHHHHHHHHHcCCC--CeEEEEEeehhhcccCCCCCccccCc
Confidence 999899999999999999 56799999999999999999999999999954 9999999999977654 347899999
Q ss_pred eEEEEEccCCCc-eeeecceeecccccccccccCCCCccccccCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccCcc
Q 018518 168 AVAMLIGPDAPI-AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVD 246 (354)
Q Consensus 168 AaA~lL~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~did 246 (354)
|+|+||++++.+ .+.. ....++.+.+++|+|.+ ..++.++|++++..|.+.+..+++.++++. |++++|||
T Consensus 155 A~A~Ll~~~~~i~~~~~-~~~~~t~~~~df~~p~~-~~~~~v~g~~s~~~y~~~~~~~~~~~l~~~------g~~~~did 226 (379)
T TIGR01835 155 AVAMLVSADPKLLAINE-DSVLYTDDIMDFWRPNY-STTALVDGQYSNEQYLNAFENAWNDYAKRT------GLSLADFA 226 (379)
T ss_pred cEEEEEecCCCeeEEec-cceeeecCCCCccCCCC-CCceeECcHHHHHHHHHHHHHHHHHHHHHh------CCCHHHcC
Confidence 999999987653 3332 12355666789999874 556889999999999999999999999886 59999999
Q ss_pred eeeccccchHHHHHHHHHhcchhhhcccCchhhHHhhhcCCCCCCCccccccchHHHHHHHHHHHHHHHhhccccccccc
Q 018518 247 YFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPK 326 (354)
Q Consensus 247 ~~v~Hq~n~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~~s~~~~~ 326 (354)
+|+|||||.+|..+..+++. ... .++. .+.+.+.+.+++.+.+
T Consensus 227 ~~i~H~p~~~~~~k~~~~~l-~~~-------------------~~~~-----------------~~~~~~~~~~s~~~~~ 269 (379)
T TIGR01835 227 AFCFHVPFTKMGLKALRHIL-KKN-------------------YEDE-----------------DESVQNAYLESIIYNR 269 (379)
T ss_pred EEEECCCCCcHHHHHHHHHH-hhc-------------------cccc-----------------HHHHHHHhhhhhhhhh
Confidence 99999999999776655542 100 0010 1122344445666789
Q ss_pred ccCccchhHHHhHHHhhhcccCccccCC
Q 018518 327 QVGNMYTASLYAAFASLLHEKHSSLVSG 354 (354)
Q Consensus 327 ~~GN~~saSi~~~L~~~l~~~~~~~~~~ 354 (354)
+||||||||+|++|.++++++ ..+++|
T Consensus 270 ~~GN~~sas~~l~L~~~l~~~-~~~~~G 296 (379)
T TIGR01835 270 EVGNLYTGSLYLGLASLLENA-FEDTTG 296 (379)
T ss_pred hcCchHhHHHHHHHHHHHHhc-ccCCCC
Confidence 999999999999999999875 234554
No 8
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=4.2e-47 Score=365.15 Aligned_cols=286 Identities=15% Similarity=0.122 Sum_probs=232.6
Q ss_pred cceEEeEEEEEcCCccccHHHHHHhhCCCcchheeccccEEEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEec
Q 018518 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGS 86 (354)
Q Consensus 7 ~~v~I~~ig~~lP~~~v~~e~l~~~~~~~~~~~~~gig~r~~~~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t 86 (354)
++++|.++++|+|+++++|+++.+.++.+.+|+...+|+++|++.. +++..+|+.+|+++||+++|++|+|||+||++|
T Consensus 3 ~~~~I~~~g~~lP~~~v~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~-~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~~ 81 (329)
T PRK07204 3 RYISIKGIGTYLPKRKVDSLELDKKLDLPEGWVLKKSGVKTRHFVD-GETSSYMGAEAAKKAVEDAKLTLDDIDCIICAS 81 (329)
T ss_pred CCcEEEEEEEeCCCceecHHHHHHhhCCCHhHhhhccCceEEeecC-CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEC
Confidence 3589999999999999999999999998888888788888888887 889999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHhcCcCCC-CeeEEeecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeeccc----cCCCCCC
Q 018518 87 ETVIDKSKSIKTFLMQIFEKYGNT-DIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV----YAEGPAR 161 (354)
Q Consensus 87 ~t~~~~~P~~a~~l~~~Lgl~g~~-~~~~~di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~~----~~~~~~~ 161 (354)
+++++..|+++.+|+++||+ ++ .++++|++.+|+|+++||.+|..++++|.+ ++||||++|.+. +.+..+.
T Consensus 82 ~~~~~~~p~~a~~v~~~lgl--~~~~~~~~~v~~~C~~~~~al~~a~~~l~~g~~--~~~Lvv~~e~~s~~~~~~~~~~~ 157 (329)
T PRK07204 82 GTIQQAIPCTASLIQEQLGL--QHSGIPCFDINSTCLSFITALDTISYAIECGRY--KRVLIISSEISSVGLNWGQNESC 157 (329)
T ss_pred CCCCCCCccHHHHHHHHhCC--CCCCceEEEccchhHHHHHHHHHHHHHHHCCCC--CEEEEEEeccccCCCCcccCcce
Confidence 99988889999999999999 33 479999999999999999999999999965 999999999973 2233456
Q ss_pred ccccceeEEEEEccCCC-ceeeecceeecccccccccccCCC--------------CccccccCcchHHHHHHHHHHHHH
Q 018518 162 PTGGAAAVAMLIGPDAP-IAFESKLRGSHMSHAYDFYKPNLA--------------SEYPVVDGKLSQTCYLMALDSCYK 226 (354)
Q Consensus 162 ~lfGDGAaA~lL~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~--------------~~~~~~~G~~~~~~~~~~~~~~~~ 226 (354)
.+|||||+|+||++++. ..+......+++........|.++ ..+..++|+..++.....++++++
T Consensus 158 ~lfGDGAaA~ll~~~~~~~~il~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 237 (329)
T PRK07204 158 ILFGDGAAAVVITKGDHSSRILASHMETYSSGAHLSEIRGGGTMIHPREYSEERKEDFLFDMNGRAIFKLSSKYLMKFID 237 (329)
T ss_pred EEEecccEEEEEEEcCCCCcEEEEEEEEecCCCCceEEecCCcCCCCcccccccccCceEEECCHHHHHHHHHHHHHHHH
Confidence 89999999999998754 233322233333211111111110 112356777777777777888888
Q ss_pred HHHHHHHhhhcCCCCccCcceeeccccchHHHHHHHHHhcchhhhcccCchhhHHhhhcCCCCCCCccccccchHHHHHH
Q 018518 227 YFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKAS 306 (354)
Q Consensus 227 ~~l~~~~~~~~~g~~~~did~~v~Hq~n~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 306 (354)
.+++++ |++++|||+|++||+|.++++.+.++|+++.
T Consensus 238 ~~L~~~------gl~~~did~~~~H~~~~~~~~~i~~~l~l~~------------------------------------- 274 (329)
T PRK07204 238 KLLMDA------GYTLADIDLIVPHQASGPAMRLIRKKLGVDE------------------------------------- 274 (329)
T ss_pred HHHHHc------CCCHHHCCEEEeCCCCHHHHHHHHHHcCCCH-------------------------------------
Confidence 888876 6999999999999999999999999999752
Q ss_pred HHHHHHHHHhhcccccccccccCccchhHHHhHHHhhhcccCccccCC
Q 018518 307 QQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLVSG 354 (354)
Q Consensus 307 ~~~~~~~~~~k~~~s~~~~~~~GN~~saSi~~~L~~~l~~~~~~~~~~ 354 (354)
+|+..+ .++||||+|||+|+.|.++++++ .+++|
T Consensus 275 ---------e~~~~~---~~~~Gn~~sas~~~~L~~~~~~g--~~~~G 308 (329)
T PRK07204 275 ---------ERFVTI---FEDHGNMIAASIPVALFEAIKQK--KVQRG 308 (329)
T ss_pred ---------HHhhhh---HhhhCcHHHHHHHHHHHHHHHcC--CCCCC
Confidence 565544 37999999999999999999876 45544
No 9
>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism]
Probab=100.00 E-value=7e-47 Score=351.59 Aligned_cols=348 Identities=63% Similarity=1.013 Sum_probs=315.1
Q ss_pred CCCCcceEEeEEEEEcCCccccHHHHHHhhCCCcchheeccccEEEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEE
Q 018518 3 SWHPKNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRL 82 (354)
Q Consensus 3 ~~~~~~v~I~~ig~~lP~~~v~~e~l~~~~~~~~~~~~~gig~r~~~~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~l 82 (354)
+..+.+++|.++-.|+|...|+++|++++.|.+..++..|+|+.++.++...|+...|+..+.++++++..++++.|+.|
T Consensus 6 ~~~p~dvGI~aieiyfP~~yV~Q~elEk~d~vs~gKytIGLGq~~MgfcsdrEDi~Sl~ltvvs~Lmery~i~~~~IGRL 85 (462)
T KOG1393|consen 6 SNWPKDVGIIAIEIYFPSQYVDQEELEKFDGVSAGKYTIGLGQTQMGFCSDREDIISLSLTVVSRLMERYNIDPDSIGRL 85 (462)
T ss_pred ccCccccceeEEEEEcCccccChhhHhhcCCccccceEeccCcceecccCchhhhhhhhHHHHHHHHHHhCCChhhcceE
Confidence 33456899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeeccccCCCCCCc
Q 018518 83 EVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARP 162 (354)
Q Consensus 83 i~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~~~~~~~~~~ 162 (354)
.|+|.|-.+...++-..|++.++-+|+.++..+|..++|.|+.+||..|.+||++..+++|.+||||+|+..|..++.++
T Consensus 86 EVGTETiiDKSKSVKt~LMqLF~~sgNtdIEGiDttnACYGGtaALfnavnWiESssWDGr~aivV~gDIAvY~~G~aRp 165 (462)
T KOG1393|consen 86 EVGTETIIDKSKSVKTVLMQLFEESGNTDIEGIDTTNACYGGTAALFNAVNWIESSSWDGRYAIVVCGDIAVYAKGNARP 165 (462)
T ss_pred EecceeccccchHHHHHHHHHhhhcCCCccccccccccccccHHHHHHHhhhhhhcccCCceeEEEEeeEEEecCCCCCC
Confidence 99999998899999999999999877899999999999999999999999999999999999999999999999999999
Q ss_pred cccceeEEEEEccCCCceeeecceeecccccccccccCCCCccccccCcchHHHHHHHHHHHHHHHHHHHHhhh-c-CCC
Q 018518 163 TGGAAAVAMLIGPDAPIAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLE-G-RQF 240 (354)
Q Consensus 163 lfGDGAaA~lL~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~-~-~g~ 240 (354)
+-|.||+|+||+++.++.++.+..++++.+.+||+.|+..++||.+||++++++|+.++..+...+.++....- + .+.
T Consensus 166 TGGAgAVAmLIgPnApi~ferglr~thM~hayDFyKPdl~SEyPvVDGklSi~cYl~Ald~cY~~~~kK~~~~~~~~~~~ 245 (462)
T KOG1393|consen 166 TGGAGAVAMLIGPNAPIIFERGLRATHMQHAYDFYKPDLLSEYPVVDGKLSIQCYLSALDRCYTVYRKKIAAQWQKSGSD 245 (462)
T ss_pred CCCcceEEEEEcCCCceEecccchhhhhhhhhhccCCCCCCcCceecCeehHHHHHHHHHHHHHHHHHHHHHHhccccCc
Confidence 99999999999998888888888899999999999999889999999999999999999999998887775221 1 245
Q ss_pred CccCcceeeccccchHHHHHHHHHhcchhhhcccCchhhHHhhhcCCCCCCCccccccchHHHHHHHHHHHHHHHhhccc
Q 018518 241 SMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQP 320 (354)
Q Consensus 241 ~~~did~~v~Hq~n~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 320 (354)
.++++|++|||.|..|++++-..+|.++|..++++..+|.. . ...++..+|.+.||+++|+|.+..++.|.+|+.+
T Consensus 246 ~l~~fdy~ifHsP~cKlvqKs~arl~ynDf~~~~~~~~~~~--~--~~~~~~l~~s~~dr~~ek~~~~~s~~~~~~Kt~~ 321 (462)
T KOG1393|consen 246 NLNSFDYIIFHSPYCKLVQKSLARLLYNDFLLNPSQLPESA--G--LESTLKLDESYTDRDLEKAFIKISKPIFKKKTKP 321 (462)
T ss_pred ccccCCeEEEeCchhhhHHHHHHHhhhhhhhhccccccccc--c--ccccccccccccchHHHHHHHHHhHHHHHhhccc
Confidence 56799999999999999999999999998776655443322 1 1157788899999999999999999999999999
Q ss_pred ccccccccCccchhHHHhHHHhhhcccCccccCC
Q 018518 321 STLIPKQVGNMYTASLYAAFASLLHEKHSSLVSG 354 (354)
Q Consensus 321 s~~~~~~~GN~~saSi~~~L~~~l~~~~~~~~~~ 354 (354)
|+.+.++.|||||+|++.+|+++|....++-+.|
T Consensus 322 sl~~~~~~GNmYTaSly~~l~sll~~~~~d~l~G 355 (462)
T KOG1393|consen 322 SLLAPRRNGNMYTASLYASLASLLSAVPADELAG 355 (462)
T ss_pred eeEeeccCCccccHHHHHHHHHHHhccchhhhhc
Confidence 9999999999999999999999998876555443
No 10
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=100.00 E-value=8.5e-47 Score=362.73 Aligned_cols=285 Identities=18% Similarity=0.189 Sum_probs=229.0
Q ss_pred cceEEeEEEEEcCCccccHHHHHHhhCCCcchheeccccEEEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEec
Q 018518 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGS 86 (354)
Q Consensus 7 ~~v~I~~ig~~lP~~~v~~e~l~~~~~~~~~~~~~gig~r~~~~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t 86 (354)
|.++|.++|+|+|+++|+|+|+++.++.+.+++...+|+++|++..++++..+|+.+|+++||+++|++|+|||.||++|
T Consensus 1 ~~v~I~~~g~~lP~~~v~~~e~~~~~~~~~~~i~~~~gi~~r~~~~~~~~~~~la~~A~~~aL~~ag~~~~dId~vi~~s 80 (326)
T CHL00203 1 MGVHILSTGSSVPNFSVENQQFEDIIETSDHWISTRTGIKKRHLAPSSTSLTKLAAEAANKALDKAHMDPLEIDLIILAT 80 (326)
T ss_pred CccEEEEEEEECCCeEEcHHHHHHhcCCChhhEeeccCeEEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 46899999999999999999999999877778877788888889888999999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeeccc----cCCCCCCc
Q 018518 87 ETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV----YAEGPARP 162 (354)
Q Consensus 87 ~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~~----~~~~~~~~ 162 (354)
+++++. ++.+.++++.||+ .++.++|++++|+|+++||.+|..+|++|.+ +++|||++|.++ +.++....
T Consensus 81 ~~~~~~-~~~~~~v~~~Lg~---~~~~~~~v~~~Casg~~al~~A~~~i~sg~~--~~~Lvv~~e~~s~~~~~~~~~~~~ 154 (326)
T CHL00203 81 STPDDL-FGSASQLQAEIGA---TRAVAFDITAACSGFILALVTATQFIQNGSY--KNILVVGADTLSKWIDWSDRKTCI 154 (326)
T ss_pred CCCCCC-CchHHHHHHHhCC---CCCceeeecccchhHHHHHHHHHHHHHcCCC--CEEEEEEehhhhCcCCcccCCceE
Confidence 888765 4668899999999 5688999999999999999999999999966 999999999973 34444578
Q ss_pred cccceeEEEEEccCCCceeeecceeeccccccccc---------------ccCCCCccccccCcchHHHHHHHHHHHHHH
Q 018518 163 TGGAAAVAMLIGPDAPIAFESKLRGSHMSHAYDFY---------------KPNLASEYPVVDGKLSQTCYLMALDSCYKY 227 (354)
Q Consensus 163 lfGDGAaA~lL~~~~~~~~~~~~~~~~~~~~~~~~---------------~p~~~~~~~~~~G~~~~~~~~~~~~~~~~~ 227 (354)
+|||||+|+||++.+...+......+++.....+. .|.....++.|+|...++.....++.++++
T Consensus 155 ~fgDga~A~ll~~~~~~~~~~~~~~t~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ 234 (326)
T CHL00203 155 LFGDGAGAAIIGASYENSILGFKLCTDGKLNSHLQLMNKPVNNQSFGTTKLPQGQYQSISMNGKEVYKFAVFQVPAVIIK 234 (326)
T ss_pred EEcceeeEEEEEEcCCCCeEEEEEEEcCCCcceEEecCCCCCcccccccccccCCcceEEECCHHHHHHHHHHHHHHHHH
Confidence 99999999999986532221111223332111110 111112344577877666555667777888
Q ss_pred HHHHHHhhhcCCCCccCcceeeccccchHHHHHHHHHhcchhhhcccCchhhHHhhhcCCCCCCCccccccchHHHHHHH
Q 018518 228 FCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQ 307 (354)
Q Consensus 228 ~l~~~~~~~~~g~~~~did~~v~Hq~n~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 307 (354)
++++. |++++|||+|++||+|.++++.+.++|++++
T Consensus 235 ~L~~~------g~~~~did~~~~hq~~~~~~~~~~~~lgl~~-------------------------------------- 270 (326)
T CHL00203 235 CLNAL------NISIDEVDWFILHQANKRILEAIANRLSVPN-------------------------------------- 270 (326)
T ss_pred HHHHc------CCCHHHCCEEEECCCCHHHHHHHHHHhCCCH--------------------------------------
Confidence 77775 6999999999999999999999999999862
Q ss_pred HHHHHHHHhhcccccccccccCccchhHHHhHHHhhhcccCccccCC
Q 018518 308 QVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLVSG 354 (354)
Q Consensus 308 ~~~~~~~~~k~~~s~~~~~~~GN~~saSi~~~L~~~l~~~~~~~~~~ 354 (354)
+|+..+ +++||||+|||+|++|.++++++ .+++|
T Consensus 271 --------~k~~~~---l~~~Gn~~sasi~~~L~~~~~~g--~~~~G 304 (326)
T CHL00203 271 --------SKMITN---LEKYGNTSAASIPLALDEAIQNN--KIQPG 304 (326)
T ss_pred --------HHhhhH---HHhhCcHHHHHHHHHHHHHHHhC--CCCCC
Confidence 666543 47999999999999999999876 44444
No 11
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=100.00 E-value=1.3e-46 Score=368.35 Aligned_cols=285 Identities=15% Similarity=0.127 Sum_probs=229.6
Q ss_pred cceEEeEEEEEcCCccccHHHHHHhhCCCcchheeccccEEEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEec
Q 018518 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGS 86 (354)
Q Consensus 7 ~~v~I~~ig~~lP~~~v~~e~l~~~~~~~~~~~~~gig~r~~~~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t 86 (354)
++++|.|+|+|+|+++++|+++.+.++.+.+|+...+|+++|++..++++..+|+.+|+++||+++|++++|||+||++|
T Consensus 46 ~~~~I~g~g~~lP~~~v~n~el~~~~~~~~~~i~~~tGi~~R~~~~~~~~~~~La~~Aa~~aL~~agi~~~dId~li~~s 125 (379)
T PLN02326 46 SGSKLVGCGSAVPKLLITNDDLSKLVDTSDEWIATRTGIRNRRVLSGDETLTSLAVEAAKKALEMAGVDPEDVDLVLLCT 125 (379)
T ss_pred CCcEEEEEEEECCCceecHHHHHHhcCCchhheecccCcceEeecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 46899999999999999999999998887888877777778888888999999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeecc-c---cCCCCCCc
Q 018518 87 ETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA-V---YAEGPARP 162 (354)
Q Consensus 87 ~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~-~---~~~~~~~~ 162 (354)
+++++. ++.+.+|+++||+ +++.+||++++|+|+++||.+|..++++|.+ +++|||++|.+ . +.++.+..
T Consensus 126 ~~~~~~-~~~a~~v~~~LG~---~~~~~~dv~~~Ca~~~~aL~~A~~~l~~g~~--~~vLVv~~e~~s~~~~~~d~~~~~ 199 (379)
T PLN02326 126 SSPDDL-FGSAPQVQAALGC---TNALAFDLTAACSGFVLGLVTAARFIRGGGY--KNVLVIGADALSRYVDWTDRGTCI 199 (379)
T ss_pred CCCCcc-CcHHHHHHHHhCC---CCCceeeccccchHHHHHHHHHHHHHHcCCC--CEEEEEEechhcCCCCccccCceE
Confidence 998865 5779999999999 5799999999999999999999999999965 99999999997 2 33444567
Q ss_pred cccceeEEEEEccCCC--ceeeecceeeccccccccccc----------------------CCCCccccccCcchHHHHH
Q 018518 163 TGGAAAVAMLIGPDAP--IAFESKLRGSHMSHAYDFYKP----------------------NLASEYPVVDGKLSQTCYL 218 (354)
Q Consensus 163 lfGDGAaA~lL~~~~~--~~~~~~~~~~~~~~~~~~~~p----------------------~~~~~~~~~~G~~~~~~~~ 218 (354)
+|||||+|+||++++. ..+....+.+++.....+..+ ..+..++.|+|+..++...
T Consensus 200 lfGDGAaAvlL~~~~~~~~~i~~~~~~t~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~ 279 (379)
T PLN02326 200 LFGDGAGAVVLQACDDDEDGLLGFDMHSDGNGHKHLHATFKGEDDDSSGGNTNGVGDFPPKKASYSCIQMNGKEVFKFAV 279 (379)
T ss_pred EEcceeEEEEEEEcCCCCCceEEEEEEEcCCCCCeEEecCCCCcccccccccccccccccccccccceEecCHHHHHHHH
Confidence 9999999999998642 122211223332211111000 0011125577777666666
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCccCcceeeccccchHHHHHHHHHhcchhhhcccCchhhHHhhhcCCCCCCCcccccc
Q 018518 219 MALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQ 298 (354)
Q Consensus 219 ~~~~~~~~~~l~~~~~~~~~g~~~~did~~v~Hq~n~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 298 (354)
..++.+++.++++. |++++|||+|++||+|.++++.+.++|+++.
T Consensus 280 ~~~~~~i~~~L~~~------gl~~~dId~~v~Hq~n~~~~~~~~~~Lgl~~----------------------------- 324 (379)
T PLN02326 280 RCVPQVIESALQKA------GLTAESIDWLLLHQANQRIIDAVAQRLGIPP----------------------------- 324 (379)
T ss_pred HHHHHHHHHHHHHc------CCCHHHCCEEEECCCCHHHHHHHHHHcCCCH-----------------------------
Confidence 66777788877775 6999999999999999999999999999852
Q ss_pred chHHHHHHHHHHHHHHHhhcccccccccccCccchhHHHhHHHhhhcccCccccCC
Q 018518 299 SRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLVSG 354 (354)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~k~~~s~~~~~~~GN~~saSi~~~L~~~l~~~~~~~~~~ 354 (354)
+|+..++ ++||||+|||||++|.++++++ .+++|
T Consensus 325 -----------------ek~~~~l---~~~GNt~sAsi~~~L~~~~~~g--~~~~G 358 (379)
T PLN02326 325 -----------------EKVISNL---ANYGNTSAASIPLALDEAVRSG--KVKKG 358 (379)
T ss_pred -----------------HHeeecH---hhcCcHHHHHHHHHHHHHHHcC--CCCCC
Confidence 6776553 7999999999999999999876 44444
No 12
>PRK04262 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-46 Score=364.77 Aligned_cols=279 Identities=27% Similarity=0.387 Sum_probs=225.6
Q ss_pred cceEEeEEEEEcCCccccHHHHHHhhCCCcchheeccccEEEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEec
Q 018518 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGS 86 (354)
Q Consensus 7 ~~v~I~~ig~~lP~~~v~~e~l~~~~~~~~~~~~~gig~r~~~~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t 86 (354)
|+++|.++|+|+|+++++|+++++.++.+++|+...+|+++|++++++++..+|+.+|+++||+++|++++|||+||++|
T Consensus 1 ~~v~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s 80 (347)
T PRK04262 1 MMVGIVGYGAYIPRYRIKVEEIARVWGDDPEAIKRGLGVEEKSVPGPDEDTATIAVEAARNALKRAGIDPKEIGAVYVGS 80 (347)
T ss_pred CceeEEEEEEeCCCEEecHHHHHHHhCcCHHHHhhccCeeeeecCCCCcCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 56899999999999999999999999999999987888888889999999999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeeccccCCC-CCCcccc
Q 018518 87 ETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEG-PARPTGG 165 (354)
Q Consensus 87 ~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~~~~~~-~~~~lfG 165 (354)
+++++..|+++.+|+++||+ ++++.++|++++|+|+++||.+|..++++|.+ ++||||++|+....+. ....+||
T Consensus 81 ~~~~~~~p~~a~~v~~~Lgl--~~~~~~~dv~~~C~~~~~aL~~A~~~i~sg~~--~~aLVv~~e~~~~~~~~~~~~~~G 156 (347)
T PRK04262 81 ESHPYAVKPTATIVAEALGA--TPDLTAADLEFACKAGTAALQAAMGLVKSGMI--KYALAIGADTAQGAPGDALEYTAA 156 (347)
T ss_pred cCCCcccccHHHHHHHHcCC--CCCceEEEHHHhHHHHHHHHHHHHHHHHcCCC--CEEEEEEEeeeccCCCCCCCCcCC
Confidence 99998889999999999999 45688999999999999999999999999965 9999999999643322 2246789
Q ss_pred ceeEEEEEccCCC-ceeeecceeecccccccccccCCCCccccccCcchH-HHHHHHHHHHHHHHHHHHHhhhcCCCCcc
Q 018518 166 AAAVAMLIGPDAP-IAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQ-TCYLMALDSCYKYFCQKFEKLEGRQFSML 243 (354)
Q Consensus 166 DGAaA~lL~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~l~~~~~~~~~g~~~~ 243 (354)
|||+|+||++++. ..+.. . .+...+..+++++. +..++.....+.. ..|.+.++.+++.++++. |++++
T Consensus 157 DGA~A~ll~~~~~~~~i~~-~-~~~~~d~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~------gl~~~ 227 (347)
T PRK04262 157 AGGAAFIIGKEEVIAEIEA-T-YSYTTDTPDFWRRE-GEPYPRHGGRFTGEPAYFKHIISAAKGLMEKL------GLKPS 227 (347)
T ss_pred CCcEEEEEecCcccceeec-c-ccccccchhhcCCC-CCcCCCcCceecchHHHHHHHHHHHHHHHHHh------CcCHH
Confidence 9999999997653 22321 1 11112233445432 2111111111111 145567778888888876 69999
Q ss_pred CcceeeccccchHHHHHHHHHhcchhhhcccCchhhHHhhhcCCCCCCCccccccchHHHHHHHHHHHHHHHhhcccccc
Q 018518 244 DVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTL 323 (354)
Q Consensus 244 did~~v~Hq~n~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~~s~~ 323 (354)
|||+|+|||+|.+|++.+.++|+++. +|+..++
T Consensus 228 dId~~v~Hq~n~~~~~~~~~~Lgl~~----------------------------------------------ek~~~~~- 260 (347)
T PRK04262 228 DYDYAVFHQPNGKFPLRVAKMLGFTK----------------------------------------------EQVKPGL- 260 (347)
T ss_pred HhceeecCCCchHHHHHHHHHcCCCH----------------------------------------------HHhhccc-
Confidence 99999999999999999999999752 6776554
Q ss_pred cccccCccchhHHHhHHHhhhc
Q 018518 324 IPKQVGNMYTASLYAAFASLLH 345 (354)
Q Consensus 324 ~~~~~GN~~saSi~~~L~~~l~ 345 (354)
+.++||||+|||||++|.++++
T Consensus 261 ~~~~~GNt~sAsi~~~L~~~~~ 282 (347)
T PRK04262 261 LTPYIGNTYSGSALLGLAAVLD 282 (347)
T ss_pred hhhhhCChHHHHHHHHHHHHHH
Confidence 3579999999999999999986
No 13
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=100.00 E-value=5.8e-46 Score=359.34 Aligned_cols=278 Identities=27% Similarity=0.405 Sum_probs=222.4
Q ss_pred ceEEeEEEEEcCCccccHHHHHHhhCCCcchheeccccEEEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecc
Q 018518 8 NVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSE 87 (354)
Q Consensus 8 ~v~I~~ig~~lP~~~v~~e~l~~~~~~~~~~~~~gig~r~~~~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~ 87 (354)
+++|.++|+|+|+++++|+++++.++.+++|+..++|+++|+++++++++.+|+++|+++||+++|++++|||+||++|+
T Consensus 1 ~~~I~g~g~~lP~~~v~n~~l~~~~~~~~~~i~~~~Gi~~r~v~~~~~~~~~la~~Aa~~aL~~agl~~~dID~li~~s~ 80 (345)
T TIGR00748 1 MAGIVGYGAYIPMYRIKVEEIARVWGKDPESISNGLPVEEKAVPGLDEDTATIGVEAARNALKRAKIDPKDIGAVYVGSE 80 (345)
T ss_pred CccEEEEEEeCCCeeecHHHHHHHhCCCHhHeeeccceeeeecCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEec
Confidence 36899999999999999999999999899999888899999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeeccccCCC-CCCccccc
Q 018518 88 TVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEG-PARPTGGA 166 (354)
Q Consensus 88 t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~~~~~~-~~~~lfGD 166 (354)
++++..|+.+..+++.||+ ++++.+||++++|+|+++||.+|..+|++|.+ +++|||++|..+..+. ....+|||
T Consensus 81 ~~~~~~p~~a~~v~~~LGl--~~~~~~~dv~~aC~g~~~al~~A~~~i~sg~~--~~vLVv~~d~~~~~~~~~~~~~~GD 156 (345)
T TIGR00748 81 SHPYAVKPTATIVAEAIGA--TPDLTAADLEFACKAGTAGIQACMGLVASGMI--KYGLAIGADTAQGAPGDALEYTAGA 156 (345)
T ss_pred CCCccccchHHHHHHHcCC--CCCceEEEHHHhHHHHHHHHHHHHHHHHcCCC--CEEEEEEEeecccCCCccCcccCCC
Confidence 9998889999999999999 45789999999999999999999999999966 9999999999854322 23567899
Q ss_pred eeEEEEEccCCCc-eeeecceeecccccccccccCCCCccccccCcchH-HHHHHHHHHHHHHHHHHHHhhhcCCCCccC
Q 018518 167 AAVAMLIGPDAPI-AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQ-TCYLMALDSCYKYFCQKFEKLEGRQFSMLD 244 (354)
Q Consensus 167 GAaA~lL~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~l~~~~~~~~~g~~~~d 244 (354)
||+|+||++.+.. .+.. . .+...+..+++++. +..++...+++.. ..+.+....+++.++++. |++++|
T Consensus 157 GAaA~vl~~~~~~~~~~~-~-~~~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~------gl~~~d 227 (345)
T TIGR00748 157 GGAAYIIGEKNTVAYFEG-T-YSYTTDTPDFWRRE-GEPYPRHGGRFTGEPAYFHHVVTAAKGLMEKL------GLTPED 227 (345)
T ss_pred ceEEEEEccCCcceEeec-c-cceecccccccccC-CCcCCCcCCeecChHHHHHHHHHHHHHHHHHc------CCCHHH
Confidence 9999999976532 3321 1 11111222344432 1222222222211 123333446667777765 699999
Q ss_pred cceeeccccchHHHHHHHHHhcchhhhcccCchhhHHhhhcCCCCCCCccccccchHHHHHHHHHHHHHHHhhccccccc
Q 018518 245 VDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLI 324 (354)
Q Consensus 245 id~~v~Hq~n~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~~s~~~ 324 (354)
||+|++||+|.+|++.+.++|+++. +|+..++.
T Consensus 228 id~~i~Hq~~~~~~~~~~~~lgl~~----------------------------------------------ek~~~~~~- 260 (345)
T TIGR00748 228 FDYAVFHQPNGKFYLVAARMLGFPK----------------------------------------------EQVKPGLL- 260 (345)
T ss_pred cCEEEeCCCChHHHHHHHHHcCCCH----------------------------------------------HHeecccc-
Confidence 9999999999999999999999752 67766542
Q ss_pred ccccCccchhHHHhHHHhhhc
Q 018518 325 PKQVGNMYTASLYAAFASLLH 345 (354)
Q Consensus 325 ~~~~GN~~saSi~~~L~~~l~ 345 (354)
.++||||||||||++|.++++
T Consensus 261 ~~~~GNt~sAsipl~L~~~~~ 281 (345)
T TIGR00748 261 TPRIGNTYSGATPVGLSAVLD 281 (345)
T ss_pred ccccCchhhhHHHHHHHHHHH
Confidence 369999999999999999875
No 14
>PLN03169 chalcone synthase family protein; Provisional
Probab=100.00 E-value=2.4e-46 Score=367.13 Aligned_cols=278 Identities=17% Similarity=0.172 Sum_probs=217.6
Q ss_pred CcceEEeEEEEEcCCccccHHHHHHhh----CCCcch-------heeccccEEEeecCC---------------------
Q 018518 6 PKNVGILALDIYFPPTCVLQEALEVHD----GVSKGK-------YTVGLGQDCMAFCSE--------------------- 53 (354)
Q Consensus 6 ~~~v~I~~ig~~lP~~~v~~e~l~~~~----~~~~~~-------~~~gig~r~~~~~~~--------------------- 53 (354)
+..++|.++|+|+|+++++|+++.+.+ +.+..| +...+|+++|++..+
T Consensus 19 ~~~~~I~gigt~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~~~r 98 (391)
T PLN03169 19 PGKATILALGKAFPSQLVPQEYLVDGYFRDTKCDDPALKEKLERLCKTTTVKTRYVVMSKEILDKYPELATEGTPTIKQR 98 (391)
T ss_pred CCCeEEEEEEeeCCCeecCHHHHHHHHHHHhcccCHHHHHHHHHHHHhCCcceeeEeccccchhhCccccccCCCCHHHH
Confidence 346899999999999999999998752 222222 333355555555431
Q ss_pred ----CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCe-eEEeecCcChhHHHHH
Q 018518 54 ----VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDI-EGVDSTNACYGGTAAL 128 (354)
Q Consensus 54 ----~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~-~~~di~~~C~g~~~aL 128 (354)
+|++.+||++|+++||+++|++|+|||+||++|+| ++..|+++++|+++||+ ++.+ .+||++.||+||++||
T Consensus 99 ~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t-~~~~P~~a~~l~~~LGl--~~~~~~~~d~~~gC~g~~~aL 175 (391)
T PLN03169 99 LDIANEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSS-EARLPGGDLYLAKQLGL--SPDVQRVMLYFLGCSGGVAGL 175 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcC-CCCCCcHHHHHHHHhCc--CCcceeeecccChhHHHHHHH
Confidence 45689999999999999999999999999999986 78899999999999999 5555 4799999999999999
Q ss_pred HHHHHHHHhCCCCCCEEEEEEeeccc--cC--------CCCCCccccceeEEEEEccCCCc----e-eeecceeeccccc
Q 018518 129 FNCVNWVESASWDGRYGLVVCTDSAV--YA--------EGPARPTGGAAAVAMLIGPDAPI----A-FESKLRGSHMSHA 193 (354)
Q Consensus 129 ~~A~~~l~sg~~~~~~vLVV~~e~~~--~~--------~~~~~~lfGDGAaA~lL~~~~~~----~-~~~~~~~~~~~~~ 193 (354)
.+|..+++++. .++||||++|.+. +. ++.+..+|||||+|+||++++.. . +. +...+..
T Consensus 176 ~~A~~~~~~~~--~~~vLvv~~e~~s~~~~~~~~~~~~d~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~---l~~~~~~- 249 (391)
T PLN03169 176 RVAKDIAENNP--GSRVLLTTSETTILGFRPPSPDRPYDLVGAALFGDGAAAVIIGADPIPVSESPFFE---LHTAIQQ- 249 (391)
T ss_pred HHHHHHHHhCC--CCeEEEEEEEcChhhccCCCccchhhhhhhhhccCceEEEEEecCCCcccCCcceE---EEeeeee-
Confidence 99999999995 4999999999973 21 22356899999999999976421 1 11 1111110
Q ss_pred ccccccCCC---------CccccccCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccCcc--eeeccccchHHHHHHH
Q 018518 194 YDFYKPNLA---------SEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVD--YFVFHSPYNKLVQKSF 262 (354)
Q Consensus 194 ~~~~~p~~~---------~~~~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~did--~~v~Hq~n~~i~~~~~ 262 (354)
..|... ..+..+.|+.+++.....++..+++++++. |++++||| +|++||+|.+|++.+.
T Consensus 250 ---~ip~~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~~L~~~------gl~~~did~~~~v~Hq~n~~il~~v~ 320 (391)
T PLN03169 250 ---FLPGTEKTIDGRLTEEGINFKLGRELPQKIEDNIEGFCKKLMKKA------GLVEKDYNDLFWAVHPGGPAILNRLE 320 (391)
T ss_pred ---EcCCCccccCceecCCceEEEECcHHHHHHHHHHHHHHHHHHHHc------CCCCCCCCcceEEecCCCHHHHHHHH
Confidence 112110 112345678877777788888888888876 69989999 9999999999999999
Q ss_pred HHhcchhhhcccCchhhHHhhhcCCCCCCCccccccchHHHHHHHHHHHHHHHhhcccccccccccCccchhHHHhHHHh
Q 018518 263 ARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFAS 342 (354)
Q Consensus 263 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~~s~~~~~~~GN~~saSi~~~L~~ 342 (354)
++|++++ +|+..++.++++||||||||||++|.+
T Consensus 321 ~~Lgl~~----------------------------------------------ek~~~s~~~l~~~GNtsSasip~~L~~ 354 (391)
T PLN03169 321 KKLKLAP----------------------------------------------EKLECSRRALMDYGNVSSNTIVYVLEY 354 (391)
T ss_pred HHcCCCH----------------------------------------------HHHHHHHHHHHHhCCchHhHHHHHHHH
Confidence 9999852 788877777899999999999999999
Q ss_pred hhccc
Q 018518 343 LLHEK 347 (354)
Q Consensus 343 ~l~~~ 347 (354)
+++++
T Consensus 355 ~~~~~ 359 (391)
T PLN03169 355 MREEL 359 (391)
T ss_pred HHHhh
Confidence 98654
No 15
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1e-45 Score=354.67 Aligned_cols=286 Identities=16% Similarity=0.170 Sum_probs=232.2
Q ss_pred cceEEeEEEEEcCCccccHHHHHHhhCCCcchheeccccEEEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEec
Q 018518 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGS 86 (354)
Q Consensus 7 ~~v~I~~ig~~lP~~~v~~e~l~~~~~~~~~~~~~gig~r~~~~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t 86 (354)
++++|.++|+|+|+++++++|+.+.++.+.+++...+|+++|++..++++..+|+.+|+++||+++|+++++||+||++|
T Consensus 3 ~~~~I~~ig~~~P~~~v~~~e~~~~~~~~~~~i~~~~Gi~~r~~~~~~~~~~~la~~A~~~al~~ag~~~~~Id~li~~~ 82 (325)
T PRK12879 3 SYARITGIGTYVPPRVLTNDDLETFIDTSDEWIVQRTGIKERRIAHVEEYTSDLAIKAAERALARAGLDAEDIDLIIVAT 82 (325)
T ss_pred CCCEEEEEEEECCCcEEcHHHHHHhcCCCHHHhhhccCceEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEc
Confidence 46899999999999999999999998887778776788888889888999999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeeccc----cCCCCCCc
Q 018518 87 ETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV----YAEGPARP 162 (354)
Q Consensus 87 ~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~~----~~~~~~~~ 162 (354)
+++++..|+.+.+|++.||+ +++.+++++++|+|++.||.+|..+|++|.+ ++||||++|.+. +.++....
T Consensus 83 ~~~~~~~~~~a~~l~~~lg~---~~~~~~~v~~~C~~~~~al~~A~~~l~~g~~--~~~Lvv~~e~~s~~~~~~~~~~~~ 157 (325)
T PRK12879 83 TTPDYLFPSTASQVQARLGI---PNAAAFDINAACAGFLYGLETANGLITSGLY--KKVLVIGAERLSKVTDYTDRTTCI 157 (325)
T ss_pred CCCCCCCChHHHHHHHHhCC---CCCcEEEECccchHHHHHHHHHHHHHHcCCC--CEEEEEEehhhcCcCCccccCceE
Confidence 99988889999999999999 5588999999999999999999999999965 999999999872 22334557
Q ss_pred cccceeEEEEEccCCC-ceeeecceeecccccccccccCCCC----------ccccccCcchHHHHHHHHHHHHHHHHHH
Q 018518 163 TGGAAAVAMLIGPDAP-IAFESKLRGSHMSHAYDFYKPNLAS----------EYPVVDGKLSQTCYLMALDSCYKYFCQK 231 (354)
Q Consensus 163 lfGDGAaA~lL~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~----------~~~~~~G~~~~~~~~~~~~~~~~~~l~~ 231 (354)
+|||||+|+||++++. ..+.....++++.....+.++.++. .++.++|+..++...+.+..++++++++
T Consensus 158 ~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~ 237 (325)
T PRK12879 158 LFGDGAGAVVLEATENEPGFIDYVLGTDGDGGDILYRTGLGTTMDRDALSGDGYIVQNGREVFKWAVRTMPKGARQVLEK 237 (325)
T ss_pred EEeecceEEEEEecCCCCCeEEEEEEEcCCCCCeEEEcCCCCCCCccccccCccEEEcCHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999998763 2332223344433222222332221 2345666665555556667777888777
Q ss_pred HHhhhcCCCCccCcceeeccccchHHHHHHHHHhcchhhhcccCchhhHHhhhcCCCCCCCccccccchHHHHHHHHHHH
Q 018518 232 FEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAK 311 (354)
Q Consensus 232 ~~~~~~~g~~~~did~~v~Hq~n~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 311 (354)
. |++++|||+|++||+|.++++.+.++|+++.
T Consensus 238 ~------g~~~~did~~~~h~~~~~~~~~~~~~lg~~~------------------------------------------ 269 (325)
T PRK12879 238 A------GLTKDDIDWVIPHQANLRIIESLCEKLGIPM------------------------------------------ 269 (325)
T ss_pred c------CCCHHHCCEEEECCCCHHHHHHHHHHcCCCH------------------------------------------
Confidence 5 6999999999999999999999999999752
Q ss_pred HHHHhhcccccccccccCccchhHHHhHHHhhhcccCccccCC
Q 018518 312 QLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLVSG 354 (354)
Q Consensus 312 ~~~~~k~~~s~~~~~~~GN~~saSi~~~L~~~l~~~~~~~~~~ 354 (354)
+|+..+ .++||||+|||+|+.|.++++++ .+++|
T Consensus 270 ----~~~~~~---~~~~Gn~~sas~~~~L~~~~~~g--~~~~G 303 (325)
T PRK12879 270 ----EKTLVS---VEYYGNTSAATIPLALDLALEQG--KIKPG 303 (325)
T ss_pred ----HHhhhh---HhhhCchHHHHHHHHHHHHHHcC--CCCCC
Confidence 565543 37999999999999999999876 44444
No 16
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.2e-45 Score=356.28 Aligned_cols=286 Identities=20% Similarity=0.168 Sum_probs=230.5
Q ss_pred CCcceEEeEEEEEcCCccccHHHHHHhh-------CCCcchheeccccEEEeecCCCCCHHHHHHHHHHHHHHHcCCCcC
Q 018518 5 HPKNVGILALDIYFPPTCVLQEALEVHD-------GVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPT 77 (354)
Q Consensus 5 ~~~~v~I~~ig~~lP~~~v~~e~l~~~~-------~~~~~~~~~gig~r~~~~~~~~e~~~~La~~Aa~~aL~~ag~~~~ 77 (354)
++.+++|.++|+|+|+++++|+++.+.+ +.+.+++...+|+++|++.+++++..+|+.+|+++||+++|++++
T Consensus 2 ~~~~v~I~~~g~~lP~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~la~~Aa~~aL~~ag~~~~ 81 (338)
T PRK09258 2 KYSNVAILSLAYELAPVVVTSSEIEERLAPLYERLRLPPGQLEALTGIRERRWWPEGTQLSDGAIAAGRKALAEAGIDPS 81 (338)
T ss_pred cccceEEEEEEecCCCccCcHHHHHHHhhhcccccCCChhHhhhhcCceeEecCCCCCCHHHHHHHHHHHHHHHcCCCHH
Confidence 4567999999999999999999999864 345566776778888888888899999999999999999999999
Q ss_pred CcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeecccc--
Q 018518 78 QIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVY-- 155 (354)
Q Consensus 78 dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~~~-- 155 (354)
+||+||++|+++++..|+++.+|+++||+ ++++.++|++++|+|++.||.+|..+|++|.+ ++||||++|.++.
T Consensus 82 ~Id~li~~s~~~~~~~p~~a~~v~~~lgl--~~~~~~~~v~~~C~~~~~al~~A~~~i~~g~~--~~~Lvv~~e~~s~~~ 157 (338)
T PRK09258 82 DIGLLINTSVCRDYLEPATACRVHHNLGL--PKSCANFDVSNACLGFLNGMLDAANMIELGQI--DYALVVSGESAREIV 157 (338)
T ss_pred HCCEEEEEcCCCCCCCChHHHHHHHHcCC--CCCCceeehhhhhHHHHHHHHHHHHHHHcCCC--CEEEEEEecccchhc
Confidence 99999999999999899999999999999 45789999999999999999999999999965 9999999998731
Q ss_pred --C------CCC---------CCccccceeEEEEEccCCC----ceeeecceeecccccccccccCCCCccccccCcchH
Q 018518 156 --A------EGP---------ARPTGGAAAVAMLIGPDAP----IAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQ 214 (354)
Q Consensus 156 --~------~~~---------~~~lfGDGAaA~lL~~~~~----~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~G~~~~ 214 (354)
. +.. ...+|||||+|+||++++. ..+......+++.. .+.... +..++.+++...+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~GDGA~A~ll~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~ 234 (338)
T PRK09258 158 EATIDRLLAPETTREDFAQSFATLTLGSGAAAAVLTRGSLHPRGHRLLGGVTRAATEH-HELCQG--GRDGMRTDAVGLL 234 (338)
T ss_pred cchhhhhccCccchhhhhhccceEEecccceEEEEecCCCCCCcceeeeeeeecCCCc-cccccc--CccceEEcHHHHH
Confidence 1 111 1368999999999998642 12222112222221 111111 1234567888777
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCCccCcceeeccccchHHHHHHHHHhcchhhhcccCchhhHHhhhcCCCCCCCcc
Q 018518 215 TCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDV 294 (354)
Q Consensus 215 ~~~~~~~~~~~~~~l~~~~~~~~~g~~~~did~~v~Hq~n~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 294 (354)
+.+...+++++++++++. |++++|||+|++||+|.++++.+.++|+++.
T Consensus 235 ~~~~~~~~~~~~~~L~~~------g~~~~did~~i~H~~~~~~~~~~~~~lgl~~------------------------- 283 (338)
T PRK09258 235 KEGVELAVDTWEAFLAQL------GWAVEQVDRVICHQVGAAHTRAILKALGIDP------------------------- 283 (338)
T ss_pred HHHHHHHHHHHHHHHHHc------CCCHHHCCEEecCCCCHHHHHHHHHHhCCCH-------------------------
Confidence 777777777888888876 6999999999999999999999999999852
Q ss_pred ccccchHHHHHHHHHHHHHHHhhcccccccccccCccchhHHHhHHHhhhcccCccccCC
Q 018518 295 ESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLVSG 354 (354)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~k~~~s~~~~~~~GN~~saSi~~~L~~~l~~~~~~~~~~ 354 (354)
+|+..++ ++||||+|||+|+.|.++++++ .+++|
T Consensus 284 ---------------------~k~~~~~---~~~GN~~sas~~~~L~~~~~~g--~~~~G 317 (338)
T PRK09258 284 ---------------------EKVFTTF---PTLGNMGPASLPITLAMAAEEG--FLKPG 317 (338)
T ss_pred ---------------------HHceehH---hhhCCcHHhHHHHHHHHHHHhC--CCCCC
Confidence 6776654 6999999999999999999876 34443
No 17
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=100.00 E-value=2.2e-44 Score=344.30 Aligned_cols=285 Identities=20% Similarity=0.198 Sum_probs=236.0
Q ss_pred ceEEeEEEEEcCCccccHHHHHHhhCCCcchheeccccEEEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecc
Q 018518 8 NVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSE 87 (354)
Q Consensus 8 ~v~I~~ig~~lP~~~v~~e~l~~~~~~~~~~~~~gig~r~~~~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~ 87 (354)
+++|.++++|+|+++++++++.+.++.+.+++...+|+++|+++.++++..+|+.+|+++||+++|+++++||+||++|+
T Consensus 1 ~~~I~~i~~~lP~~~~~~~~~~~~~~~~~~~~~~~~Gi~~r~~~~~~~~~~~la~~A~~~al~~ag~~~~~Id~li~~~~ 80 (320)
T cd00830 1 NARILGIGSYLPERVVTNDELEKRLDTSDEWIRTRTGIRERRIADPGETTSDLAVEAAKKALEDAGIDADDIDLIIVATS 80 (320)
T ss_pred CCEEEEEEEECCCcEEcHHHHHHHcCCCHHHhhhccCceEEeeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcC
Confidence 47899999999999999999999998888888777888888899888999999999999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeeccc----cCCCCCCcc
Q 018518 88 TVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV----YAEGPARPT 163 (354)
Q Consensus 88 t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~~----~~~~~~~~l 163 (354)
++++..|+++.+|+++||+ +++.+++++++|++++.||..|..++++|.+ +++|||++|.+. +.++....+
T Consensus 81 ~~~~~~~~~~~~l~~~lg~---~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~--~~vLvv~~e~~s~~~~~~~~~~~~~ 155 (320)
T cd00830 81 TPDYLFPATACLVQARLGA---KNAAAFDINAACSGFLYGLSTAAGLIRSGGA--KNVLVVGAETLSRILDWTDRSTAVL 155 (320)
T ss_pred CCCCCCCcHHHHHHHHhCC---CCCcEeeccccchHHHHHHHHHHHHHHcCCC--CEEEEEEehhhccccCcccCCceEE
Confidence 9988789999999999999 5789999999999999999999999999965 999999999973 233345689
Q ss_pred ccceeEEEEEccCCC-ceeeecceeecccccccccccCCC-----------CccccccCcchHHHHHHHHHHHHHHHHHH
Q 018518 164 GGAAAVAMLIGPDAP-IAFESKLRGSHMSHAYDFYKPNLA-----------SEYPVVDGKLSQTCYLMALDSCYKYFCQK 231 (354)
Q Consensus 164 fGDGAaA~lL~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~-----------~~~~~~~G~~~~~~~~~~~~~~~~~~l~~ 231 (354)
|||||+|+||++++. ..+......+++.....+..+.++ ..+..++++..+..+.+.+.+++++++++
T Consensus 156 ~GDgAaA~ll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 235 (320)
T cd00830 156 FGDGAGAVVLEATEEDPGILDSVLGSDGSGADLLTIPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMPESIEEALEK 235 (320)
T ss_pred EeccceEEEEEecCCCCcEEEEEEEEcCCCCCeEEeCCCCcCCccccccccCccEEEcChHHHHHHHHhhHHHHHHHHHH
Confidence 999999999998764 333332334444332222222211 12345677777777777788888888887
Q ss_pred HHhhhcCCCCccCcceeeccccchHHHHHHHHHhcchhhhcccCchhhHHhhhcCCCCCCCccccccchHHHHHHHHHHH
Q 018518 232 FEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAK 311 (354)
Q Consensus 232 ~~~~~~~g~~~~did~~v~Hq~n~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 311 (354)
. |++++|||+|++||+|.++++.+.++|+++.
T Consensus 236 ~------g~~~~di~~~~~h~~~~~~~~~~~~~lgl~~------------------------------------------ 267 (320)
T cd00830 236 A------GLTPDDIDWFVPHQANLRIIEAVAKRLGLPE------------------------------------------ 267 (320)
T ss_pred c------CCCHHHCCEEEECCCCHHHHHHHHHHhCCCH------------------------------------------
Confidence 6 6999999999999999999999999999752
Q ss_pred HHHHhhcccccccccccCccchhHHHhHHHhhhcccCccccCC
Q 018518 312 QLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLVSG 354 (354)
Q Consensus 312 ~~~~~k~~~s~~~~~~~GN~~saSi~~~L~~~l~~~~~~~~~~ 354 (354)
+|+..+ .++||||+|||+|+.|.++++++ .+++|
T Consensus 268 ----~~~~~~---~~~~Gn~~sas~~~~L~~~~~~~--~~~~G 301 (320)
T cd00830 268 ----EKVVVN---LDRYGNTSAASIPLALDEAIEEG--KLKKG 301 (320)
T ss_pred ----HHhhhh---HHhhCcHHHHHHHHHHHHHHHcC--CCCCC
Confidence 565433 47999999999999999999876 44444
No 18
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=100.00 E-value=9.3e-45 Score=353.23 Aligned_cols=282 Identities=17% Similarity=0.180 Sum_probs=214.5
Q ss_pred eEEeEEEEEcCCccccHHHHHHhhCC--Cc----------chheeccccEEEeecCC--CC-------------------
Q 018518 9 VGILALDIYFPPTCVLQEALEVHDGV--SK----------GKYTVGLGQDCMAFCSE--VE------------------- 55 (354)
Q Consensus 9 v~I~~ig~~lP~~~v~~e~l~~~~~~--~~----------~~~~~gig~r~~~~~~~--~e------------------- 55 (354)
++|.++++|+|+++++|+++.++++. +. +|+...+|+++|++..+ ++
T Consensus 2 ~~I~~~~~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gI~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (361)
T cd00831 2 ATILAIGTAVPPHRVPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPGGEETYAPRPEMSPSLDERNDIA 81 (361)
T ss_pred cEEEEEEEeCCCCcCCHHHhhHHHHhcCChhhhHHHHHHHHHHHhhcceeEEEEEecCchhhcCCccccCCCcCcchhhH
Confidence 68999999999999999999988652 22 45555566666666654 22
Q ss_pred --CHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeec-CcChhHHHHHHHHH
Q 018518 56 --DVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST-NACYGGTAALFNCV 132 (354)
Q Consensus 56 --~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~-~~C~g~~~aL~~A~ 132 (354)
++.+|+++|+++||+++|++|+|||+||++|+++ +..|+++++|+++||+ ++++.+||++ +||+|+++||.+|.
T Consensus 82 ~~~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~-~~~P~~a~~i~~~lgl--~~~~~~~dv~~~~C~~~~~al~~A~ 158 (361)
T cd00831 82 LEEARELAEEAARGALDEAGLRPSDIDHLVVNTSTG-NPTPSLDAMLINRLGL--RPDVKRYNLGGMGCSAGAIALDLAK 158 (361)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCC-CCCCCHHHHHHHHhCC--CcccchhccccccchhHHHHHHHHH
Confidence 5899999999999999999999999999999987 6789999999999999 5579999999 79999999999999
Q ss_pred HHHHhCCCCCCEEEEEEeeccc----cCC-CC---CCccccceeEEEEEccCCCc--------eeeecceeeccc--ccc
Q 018518 133 NWVESASWDGRYGLVVCTDSAV----YAE-GP---ARPTGGAAAVAMLIGPDAPI--------AFESKLRGSHMS--HAY 194 (354)
Q Consensus 133 ~~l~sg~~~~~~vLVV~~e~~~----~~~-~~---~~~lfGDGAaA~lL~~~~~~--------~~~~~~~~~~~~--~~~ 194 (354)
.+++++. .++||||++|.++ +.+ +. +..+|||||+|+||++++.. .+.......... +..
T Consensus 159 ~~~~~~~--~~~aLvv~~e~~s~~~~~~d~~~~~~~~~lfGDgaaA~ll~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 236 (361)
T cd00831 159 DLLEANP--GARVLVVSTELCSLWYRGPDHRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRAASTLLPDSEDAM 236 (361)
T ss_pred HHHHHCC--CCEEEEEEeecccceeCCCCcHHHhhhhhhccCCceEEEEEcCCCcccccccceeeecccceeeecCCCce
Confidence 9999995 4999999999973 222 22 36899999999999987531 111100000100 000
Q ss_pred cccccCCCCccccccCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccCcceeeccccchHHHHHHHHHhcchhhhccc
Q 018518 195 DFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNA 274 (354)
Q Consensus 195 ~~~~p~~~~~~~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~did~~v~Hq~n~~i~~~~~~~l~~~~~~~~~ 274 (354)
. +.... ..+..+.++.++..+...+.++++.++++.. .|++.+|||||++||+|.+|++.+.++|+++.
T Consensus 237 ~-~~~~~-~~~~~~~~~~v~~~~~~~~~~~i~~~L~~~~----~g~~~~did~~~~H~~~~~i~~~v~~~lgl~~----- 305 (361)
T cd00831 237 G-WHLGE-EGLTFVLSRDVPRLVEKNLERVLRKLLARLG----IGLFKLAFDHWCVHPGGRAVLDAVEKALGLSP----- 305 (361)
T ss_pred E-EEEEc-ceEEEEeChhHHHHHHHHHHHHHHHHhcccc----CCCccccceEEEECCCChHHHHHHHHHcCCCH-----
Confidence 1 11110 0111123344455556666777777776640 05999999999999999999999999999752
Q ss_pred CchhhHHhhhcCCCCCCCccccccchHHHHHHHHHHHHHHHhhcccccccccccCccchhHHHhHHHhhhccc
Q 018518 275 SSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEK 347 (354)
Q Consensus 275 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~~s~~~~~~~GN~~saSi~~~L~~~l~~~ 347 (354)
+|+..++.++++||||+|||||++|.++++++
T Consensus 306 -----------------------------------------~~~~~s~~~l~~~GN~~sasi~~~L~~~~~~g 337 (361)
T cd00831 306 -----------------------------------------EDLEASRMVLRRYGNMSSSSVLYVLAYMEAKG 337 (361)
T ss_pred -----------------------------------------HHHHHHHHHHHHhCCchhccHHHHHHHHHHhC
Confidence 77776666779999999999999999999876
No 19
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.1e-44 Score=354.47 Aligned_cols=285 Identities=18% Similarity=0.141 Sum_probs=212.7
Q ss_pred cceEEeEEEEEcCCccccHHHHHHhhCCC-------cchheeccccEEEeecCC-----CCCHHHHHHHHHHHHHHHcCC
Q 018518 7 KNVGILALDIYFPPTCVLQEALEVHDGVS-------KGKYTVGLGQDCMAFCSE-----VEDVISMSLTVVTSLLEKYKI 74 (354)
Q Consensus 7 ~~v~I~~ig~~lP~~~v~~e~l~~~~~~~-------~~~~~~gig~r~~~~~~~-----~e~~~~La~~Aa~~aL~~ag~ 74 (354)
|+++|.++|+|+|+++++|+++.++++.. .+|+...+|+++|++..+ .++..+|+++|+++||+++|+
T Consensus 1 ~~v~I~gig~~lP~~~v~n~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~La~~A~~~aL~~agi 80 (378)
T PRK06816 1 MNVYITSTGAFLPGEPVSNDEMEAYLGLINGKPSRARRIILRNNGIKTRHYALDPEGRPTHSNAQMAAEAIRDLLDDAGF 80 (378)
T ss_pred CCeEEEeeeecCCCCccCHHHHHHHHhhccCCcHHHHHHHHHhCCCceEEEEECCCCCCCCCHHHHHHHHHHHHHHHcCC
Confidence 56899999999999999999998877642 245554455555555432 357899999999999999999
Q ss_pred CcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeeccc
Q 018518 75 DPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV 154 (354)
Q Consensus 75 ~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~~ 154 (354)
+|+|||+||++|+++++..|+.+.+|+++||+ +++.++|++++|+|+++||.+|..++++|.+ +++|||++|.++
T Consensus 81 ~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl---~~~~~~~v~~~Cas~~~al~~A~~~i~sg~~--~~vLvv~~E~~s 155 (378)
T PRK06816 81 SLGDIELLACGTSQPDQLMPGHASMVHGELGA---PPIEVVSSAGVCAAGMMALKYAYLSVKAGES--RNAVATASELAS 155 (378)
T ss_pred CHHHCCEEEEEECCCCcCChHHHHHHHhhCCC---CCCceeeecCcCHHHHHHHHHHHHHHHCCCC--CEEEEEeEccch
Confidence 99999999999999988889999999999999 5678999999999999999999999999965 999999999982
Q ss_pred -------cCC---------CCC---------CccccceeEEEEEccCCC-ce----eeecceeecccccccccccCCC--
Q 018518 155 -------YAE---------GPA---------RPTGGAAAVAMLIGPDAP-IA----FESKLRGSHMSHAYDFYKPNLA-- 202 (354)
Q Consensus 155 -------~~~---------~~~---------~~lfGDGAaA~lL~~~~~-~~----~~~~~~~~~~~~~~~~~~p~~~-- 202 (354)
+.. +.+ .++|||||+|+||++.+. .+ +......+++... ..+.+.++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fGDGA~A~vl~~~~~~~g~~l~~~~~~~~~~~~~~-~~~~~~g~~~ 234 (378)
T PRK06816 156 RWFRASRFEAEEEKLAELEENPEIAFEKDFLRWMLSDGAGAVLLENKPRPDGLSLRIDWIDLRSYAGEL-PVCMYAGAEK 234 (378)
T ss_pred hhhhhhhhhhHHHHhhcCcccCCCCCCCCCCCEeeecccEEEEEEecCCCCCceEEEEEEeeecccccC-ccceecCCcc
Confidence 111 111 247999999999987653 11 1111222332211 11111100
Q ss_pred ---------------------CccccccCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccCcceeeccccchHHHHHH
Q 018518 203 ---------------------SEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKS 261 (354)
Q Consensus 203 ---------------------~~~~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~did~~v~Hq~n~~i~~~~ 261 (354)
..++.++++...+.+...+.+.++.++++. |++++|||+|+|||+|.+|++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~------gl~~~DId~~v~Hq~n~~~~~~v 308 (378)
T PRK06816 235 NEDGSLKGWSDYPPEEAEAASALSLKQDVRLLNENIVVYTIKPLLELVDKR------NLDPDDIDYFLPHYSSEYFREKI 308 (378)
T ss_pred CCCCCccCcccCCHHHHHhccCchHHhHHHHHHHHhHHHHHHHHHHHHHHc------CCChhhCCEEeeCcccHHHHHHH
Confidence 011223344433444444455666666654 79999999999999999999999
Q ss_pred HHHh-----cchhhhcccCchhhHHhhhcCCCCCCCccccccchHHHHHHHHHHHHHHHhhcccccccccccCccchhHH
Q 018518 262 FARL-----FFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASL 336 (354)
Q Consensus 262 ~~~l-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~~s~~~~~~~GN~~saSi 336 (354)
.++| +++ . +|+..++ ++||||+|||+
T Consensus 309 ~~~l~~~~~gl~------------------------~----------------------~k~~~~~---~~~GNt~sAsi 339 (378)
T PRK06816 309 VELLAKAGFMIP------------------------E----------------------EKWFTNL---ATVGNTGSASI 339 (378)
T ss_pred HHHHHhccCCCC------------------------h----------------------hheEEec---cccccccchHH
Confidence 9998 443 2 6776554 79999999999
Q ss_pred HhHHHhhhcccCccccCC
Q 018518 337 YAAFASLLHEKHSSLVSG 354 (354)
Q Consensus 337 ~~~L~~~l~~~~~~~~~~ 354 (354)
|++|.++++++ .+++|
T Consensus 340 pi~L~~a~~~g--~~~~G 355 (378)
T PRK06816 340 YIMLDELLNSG--RLKPG 355 (378)
T ss_pred HHHHHHHHHcC--CCCCC
Confidence 99999999887 56665
No 20
>PRK06840 hypothetical protein; Validated
Probab=100.00 E-value=6.9e-44 Score=344.25 Aligned_cols=280 Identities=15% Similarity=0.088 Sum_probs=220.9
Q ss_pred cceEEeEEEEEcCCccccHHHHHHhhCCCcchheeccccEEEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEec
Q 018518 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGS 86 (354)
Q Consensus 7 ~~v~I~~ig~~lP~~~v~~e~l~~~~~~~~~~~~~gig~r~~~~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t 86 (354)
|+++|.++++|+|+++++|+++++..+.+.+++...+|+++|+++.++++..+|+.+|+++||+++|++|+|||+||+++
T Consensus 3 ~~v~I~~~~~~lP~~~v~~~~l~~~~g~~~~~~~~~~Gi~~r~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~~ 82 (339)
T PRK06840 3 MNVGIVGTGVYLPKDVMTAEEIAEKTGIPEEVVIEKFGIYEKPVPGPEDHTSDMAIAAAKPALKQAGVDPAAIDVVIYIG 82 (339)
T ss_pred CceEEEEEEEeCCCcccCHHHHHHHhCCCHHHHhhhcCcceEeeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEec
Confidence 68999999999999999999999999988888877788888889988899999999999999999999999999999765
Q ss_pred c-cCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHHHHHh-CCCCCCEEEEEEeecc----ccCCCCC
Q 018518 87 E-TVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVES-ASWDGRYGLVVCTDSA----VYAEGPA 160 (354)
Q Consensus 87 ~-t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~~l~s-g~~~~~~vLVV~~e~~----~~~~~~~ 160 (354)
+ ++++..|+++++|+++||+ +++.++|++++|+|+++||.+|..++++ |.+ +++|||++|.. ++.++.+
T Consensus 83 ~~~~~~~~p~~a~~l~~~lGl---~~~~~~~v~~~C~~~~~al~~A~~~l~~~g~~--~~~Lvv~~~~~s~~~~~~~~~~ 157 (339)
T PRK06840 83 SEHKDYPVWSSAPKIQHEIGA---KNAWAFDIMAVCASFPIALKVAKDLLYSDPSI--ENVLLVGGYRNSDLVDYDNPRT 157 (339)
T ss_pred cCCCCCCCCchHHHHHHHhCC---CCcccccccccchHHHHHHHHHHHHHhcCCCc--cEEEEEeecccccccCcCCCCe
Confidence 4 5677789999999999999 5788999999999999999999999999 755 89999999986 2223333
Q ss_pred C--ccccceeEEEEEccCCC-ceeeecceeecccccccccccCCCCc-------------cccccCcchHHHH-----HH
Q 018518 161 R--PTGGAAAVAMLIGPDAP-IAFESKLRGSHMSHAYDFYKPNLASE-------------YPVVDGKLSQTCY-----LM 219 (354)
Q Consensus 161 ~--~lfGDGAaA~lL~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~-------------~~~~~G~~~~~~~-----~~ 219 (354)
. .+|||||+|+||++++. ..+......+++.....+..|.++.. +..+++...++.. ..
T Consensus 158 ~~~~~~GDgAaA~ll~~~~~~~~il~~~~~t~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (339)
T PRK06840 158 RFMFNFAAGGSAALLKKDAGKNRILGSAIITDGSFSEDVRVPAGGTKQPASPETVENRQHYLDVIDPESMKERLDEVSIP 237 (339)
T ss_pred eeeccCCCceeEEEEEecCCCCceEEEEEEEcCCccceEEecCCCcCCCCcccccccccceEEEcCcHHHHHHhHhhHHH
Confidence 3 34799999999998764 33332233444433333333333221 1122333323221 22
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCccCcceeeccccchHHHHHHHHHhcchhhhcccCchhhHHhhhcCCCCCCCccccccc
Q 018518 220 ALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQS 299 (354)
Q Consensus 220 ~~~~~~~~~l~~~~~~~~~g~~~~did~~v~Hq~n~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 299 (354)
.+.++++++++++ |++++|||+|++||+|.++++.+.++|+++.
T Consensus 238 ~~~~~i~~~L~~~------gl~~~did~~~~h~~~~~~~~~~~~~Lgl~~------------------------------ 281 (339)
T PRK06840 238 NFLKVIREALRKS------GYTPKDIDYLAILHMKRSAHIALLEGLGLTE------------------------------ 281 (339)
T ss_pred HHHHHHHHHHHHc------CCCHHHCCEEEECCcCHHHHHHHHHHcCCCH------------------------------
Confidence 3456666777665 6999999999999999999999999999852
Q ss_pred hHHHHHHHHHHHHHHHhhcccccccccccCccchhHHHhHHHhhhccc
Q 018518 300 RDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEK 347 (354)
Q Consensus 300 ~~~~~~~~~~~~~~~~~k~~~s~~~~~~~GN~~saSi~~~L~~~l~~~ 347 (354)
+|+. ++++||||+|||+|+.|.++++++
T Consensus 282 ----------------~~~~----~~~~~Gn~~sas~~~~L~~~~~~~ 309 (339)
T PRK06840 282 ----------------EQAI----YLDEYGHLGQLDQILSLHLALEQG 309 (339)
T ss_pred ----------------HHeE----eHHhccchhhhhHHHHHHHHHHcC
Confidence 5653 247999999999999999998766
No 21
>PLN03171 chalcone synthase-like protein; Provisional
Probab=100.00 E-value=3.4e-44 Score=352.55 Aligned_cols=283 Identities=17% Similarity=0.167 Sum_probs=206.3
Q ss_pred ceEEeEEEEEcCCccccHHHHHHhh-C--CCcc---------hheeccccEEEeecCCC---------------------
Q 018518 8 NVGILALDIYFPPTCVLQEALEVHD-G--VSKG---------KYTVGLGQDCMAFCSEV--------------------- 54 (354)
Q Consensus 8 ~v~I~~ig~~lP~~~v~~e~l~~~~-~--~~~~---------~~~~gig~r~~~~~~~~--------------------- 54 (354)
.++|.|+|+|+|+++++|+++.+++ . .+++ |+...+|+++|++..++
T Consensus 22 ~~~I~gigt~~P~~~v~n~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~~~r~ 101 (399)
T PLN03171 22 LAAVLAIGTANPANCVPQDEFPDFYFRATKSDHLTALKDKFKRICQELGVQKRYLHHTEELLSAHPEFLDHDAPSLDARL 101 (399)
T ss_pred CcEEEEEEeeCCCcccCHHHHHHHHHHHhcccccHHHHHHHHHHHHhcCCCceeEeccccccccCccccccCCCCHHHHH
Confidence 4889999999999999999999873 2 2222 45555566666666554
Q ss_pred ----CCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCe-eEEeecCcChhHHHHHH
Q 018518 55 ----EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDI-EGVDSTNACYGGTAALF 129 (354)
Q Consensus 55 ----e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~-~~~di~~~C~g~~~aL~ 129 (354)
+++.+||++|+++||+++|++++|||+||++|+|+++ .|+++++|+++||+ ++.+ .++++.+||+||++||+
T Consensus 102 ~~~~~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~-~P~~a~~v~~~LGl--~~~~~~~~~~~~gC~g~~~aL~ 178 (399)
T PLN03171 102 DIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAH-IPGVDFRLVPLLGL--RPSVRRTMLHLNGCFAGAAALR 178 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCC-CCchHHHHHHHhCC--CcccceeeccCCccHHHHHHHH
Confidence 3789999999999999999999999999999999986 79999999999999 4444 36777789999999999
Q ss_pred HHHHHHHhCCCCCCEEEEEEeeccc----cCCCCC------CccccceeEEEEEccCCC------ceeeecceeecccc-
Q 018518 130 NCVNWVESASWDGRYGLVVCTDSAV----YAEGPA------RPTGGAAAVAMLIGPDAP------IAFESKLRGSHMSH- 192 (354)
Q Consensus 130 ~A~~~l~sg~~~~~~vLVV~~e~~~----~~~~~~------~~lfGDGAaA~lL~~~~~------~~~~~~~~~~~~~~- 192 (354)
+|.++++++.+ ++||||++|.++ +.+++. ..+|||||+|+||++++. +.+...........
T Consensus 179 ~A~~li~~~~~--~~vLVv~~e~~s~~~~~~d~~~~~~~v~~~LFGDGAaA~vl~~~~~~~~~~~~~l~~~~~~~~p~~~ 256 (399)
T PLN03171 179 LAKDLAENNRG--ARVLVVAAEITLLLFNGPDEGCFQTLLNQGLFGDGAAAVIVGADADAAERPLFEIVSAAQAIIPESD 256 (399)
T ss_pred HHHHHHHhCCC--CeEEEEEEeccccccCCCCcccHHhhhccccccCccEEEEEecCCCCCCCCceEEEEeeeEEecCCc
Confidence 99999999954 999999999973 334432 579999999999998642 12221111111111
Q ss_pred -cccccccCCCCccccccCcchHHHHHHHHHHHHHHHHHHH-Hhh--hcCCCCccCcceeeccccchHHHHHHHHHhcch
Q 018518 193 -AYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKF-EKL--EGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFN 268 (354)
Q Consensus 193 -~~~~~~p~~~~~~~~~~G~~~~~~~~~~~~~~~~~~l~~~-~~~--~~~g~~~~did~~v~Hq~n~~i~~~~~~~l~~~ 268 (354)
...+..+.+ .+++++..+.....+...++.++++. .+. ...|++.+||+|+ +||+|.+|++.+.++|+++
T Consensus 257 ~~~~~~~~~~-----g~~~~~~~~~vp~~i~~~l~~~l~~~l~~~~~~~~g~~~~di~~~-~Hq~~~~il~~v~~~Lgl~ 330 (399)
T PLN03171 257 DAINMHFTEG-----GLDGNIGTRQVPGLIGDNIERCLLDAFAPLLGGDGGAEWNDLFWA-VHPGSSAILDQVDAALGLE 330 (399)
T ss_pred hheEEEEEcC-----CceEEECchhHHHHHHHHHHHHHHHHHHhhcccccCCCcccceEE-EcCCcHHHHHHHHHHcCCC
Confidence 111111111 12333332333334433444444332 000 0136788999877 6999999999999999985
Q ss_pred hhhcccCchhhHHhhhcCCCCCCCccccccchHHHHHHHHHHHHHHHhhcccccccccccCccchhHHHhHHHhhhccc
Q 018518 269 DFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEK 347 (354)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~~s~~~~~~~GN~~saSi~~~L~~~l~~~ 347 (354)
+ +|+..|+.++++||||||||||++|.++++++
T Consensus 331 ~----------------------------------------------ek~~~s~~~l~~yGNtssaSip~~L~~~~~~~ 363 (399)
T PLN03171 331 P----------------------------------------------EKLAASRRVLSDYGNMFGATVIFALDELRRQM 363 (399)
T ss_pred H----------------------------------------------HHhHHHHHHHHHhCcchhhhHHHHHHHHHhhH
Confidence 2 78877766779999999999999999998765
No 22
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=100.00 E-value=1.6e-43 Score=338.63 Aligned_cols=281 Identities=19% Similarity=0.208 Sum_probs=230.4
Q ss_pred cceEEeEEEEEcCCccccHHHHHHhhCCCcchheeccccEEEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEec
Q 018518 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGS 86 (354)
Q Consensus 7 ~~v~I~~ig~~lP~~~v~~e~l~~~~~~~~~~~~~gig~r~~~~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t 86 (354)
|.++|.++++|+|+++++++++.+.++.+..++....|.++|+++.+++++.+|+.+|+++||+++|++|++||.||+++
T Consensus 1 ~~~~I~~i~~~~P~~~~~~~~~~~~~~~~~~~i~~~~gi~~r~~~~~~~~~~~la~~A~~~al~~agl~~~~Id~~i~~~ 80 (318)
T TIGR00747 1 MYAGILGTGSYLPEKVLTNADLEKMVDTSDEWIVTRTGIKERRIAADDETSSTMGFEAAKRAIENAGISKDDIDLIIVAT 80 (318)
T ss_pred CCCEEEEEEEECCCceecHHHHHHhcCCchHHeecccCceEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEC
Confidence 45899999999999999999999998877777766678778889888999999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeeccc----cCCCCCCc
Q 018518 87 ETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV----YAEGPARP 162 (354)
Q Consensus 87 ~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~~----~~~~~~~~ 162 (354)
+++++..|+.+.++++.||+ +++++++++++|++++.||..|..+|++|.+ +++|||++|... +.++....
T Consensus 81 ~~~~~~~~~~a~~l~~~lGl---~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~--~~~Lvv~~e~~~~~~~~~~~~~~~ 155 (318)
T TIGR00747 81 TTPDHAFPSAACMVQAYLGI---KGIPAFDLSAACAGFIYALSVAKQYIESGKY--KTVLVVGAEKLSSTLDWTDRGTCV 155 (318)
T ss_pred CCCCCCCChHHHHHHHHhCC---CCCcEeehhhhhHHHHHHHHHHHHHHHcCCC--CEEEEEEehhhcCcCCcCCCCeEE
Confidence 99988889999999999999 5688999999999999999999999999965 999999999972 33344467
Q ss_pred cccceeEEEEEccCCC-ceeeecceeecccccccccccCCC------CccccccCcchHHHHHHHHHHHHHHHHHHHHhh
Q 018518 163 TGGAAAVAMLIGPDAP-IAFESKLRGSHMSHAYDFYKPNLA------SEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKL 235 (354)
Q Consensus 163 lfGDGAaA~lL~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~------~~~~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~ 235 (354)
+|||||+|+||++++. ..+......+++.....+..|.++ ..+..++|...++.+.+.+..+++.+++++
T Consensus 156 ~~GDGAaA~lL~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--- 232 (318)
T TIGR00747 156 LFGDGAGAVVLGESEDPGGIISTHLGADGTQGEALYLPAGGRPTSGPSPFITMEGNEVFKHAVRKMGDVVEETLEAN--- 232 (318)
T ss_pred EEecceeEEEEeecCCCCcEEEEEEEEcCCCcceEEECCCCcCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHc---
Confidence 8999999999998763 223222233333322223333221 223456676666666677777777777776
Q ss_pred hcCCCCccCcceeeccccchHHHHHHHHHhcchhhhcccCchhhHHhhhcCCCCCCCccccccchHHHHHHHHHHHHHHH
Q 018518 236 EGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYD 315 (354)
Q Consensus 236 ~~~g~~~~did~~v~Hq~n~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 315 (354)
|++++|||||++||+|.++++.+.++|+++.
T Consensus 233 ---g~~~~di~~~~~h~~~~~~~~~~~~~lgi~~---------------------------------------------- 263 (318)
T TIGR00747 233 ---GLDPEDIDWFVPHQANLRIIEALAKRLELDM---------------------------------------------- 263 (318)
T ss_pred ---CCCHHHCCEEEECCCCHHHHHHHHHHcCCCH----------------------------------------------
Confidence 6999999999999999999999999999852
Q ss_pred hhcccccccccccCccchhHHHhHHHhhhccc
Q 018518 316 LKVQPSTLIPKQVGNMYTASLYAAFASLLHEK 347 (354)
Q Consensus 316 ~k~~~s~~~~~~~GN~~saSi~~~L~~~l~~~ 347 (354)
+|+..++ ++||||+|||+|+.|+++++++
T Consensus 264 ~k~~~~~---~~~Gn~~sas~~~~L~~~~~~~ 292 (318)
T TIGR00747 264 SQVVKTV---HKYGNTSAASIPLALDELLRTG 292 (318)
T ss_pred HHeeehH---hhhCCHHHHHHHHHHHHHHHcC
Confidence 6666543 6899999999999999999876
No 23
>PLN03168 chalcone synthase; Provisional
Probab=100.00 E-value=4.5e-43 Score=343.39 Aligned_cols=279 Identities=16% Similarity=0.181 Sum_probs=202.0
Q ss_pred ceEEeEEEEEcCCccccHHHHHHhhC-C-----Cc--c-hhe-----eccccEEEeecCC------C-------------
Q 018518 8 NVGILALDIYFPPTCVLQEALEVHDG-V-----SK--G-KYT-----VGLGQDCMAFCSE------V------------- 54 (354)
Q Consensus 8 ~v~I~~ig~~lP~~~v~~e~l~~~~~-~-----~~--~-~~~-----~gig~r~~~~~~~------~------------- 54 (354)
.++|.++|+.+|++.++|+++.+++. . .+ + ++. +||..|+..+.+. .
T Consensus 15 ~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~ps~~~r~ 94 (389)
T PLN03168 15 PACVLGIGTAVPPAEFLQSEYPDFFFNITNCGEKEALKAKFKRICDKSGIRKRHMFLTEEVLKANPGICTYMEPSLNVRH 94 (389)
T ss_pred CeEEEEEeccCCCcccCHHHHHHHHHHhccccCcHHHHHHHHHHHHhcCCCeeeeeccccchhhCcccccccCCCHHHHH
Confidence 47899999999999999999987652 1 11 1 122 5677666544220 0
Q ss_pred ----CCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCe-eEEeecCcChhHHHHHH
Q 018518 55 ----EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDI-EGVDSTNACYGGTAALF 129 (354)
Q Consensus 55 ----e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~-~~~di~~~C~g~~~aL~ 129 (354)
+.+.+||++|+++||+++|++++|||+||++|+|+. ..|+++++|+++||+ ++.+ .++|++.||+||++||.
T Consensus 95 ~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~-~~Ps~a~~l~~~LGl--~~~~~r~~d~~~gC~g~~~aL~ 171 (389)
T PLN03168 95 DIVVVQVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGV-NMPGADHALAKLLGL--KPTVKRVMMYQTGCFGGASVLR 171 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCC-CCccHHHHHHHHhCc--CCcceeeeeeCCccHHHHHHHH
Confidence 135799999999999999999999999999999995 589999999999999 4544 48999999999999999
Q ss_pred HHHHHHHhCCCCCCEEEEEEeeccc--cCCC--------CCCccccceeEEEEEccCCCc----e-eeecceee----cc
Q 018518 130 NCVNWVESASWDGRYGLVVCTDSAV--YAEG--------PARPTGGAAAVAMLIGPDAPI----A-FESKLRGS----HM 190 (354)
Q Consensus 130 ~A~~~l~sg~~~~~~vLVV~~e~~~--~~~~--------~~~~lfGDGAaA~lL~~~~~~----~-~~~~~~~~----~~ 190 (354)
+|..+++++. .++||||++|.++ +.++ .+..||||||+|+||++++.. . +......+ ++
T Consensus 172 ~A~~~i~~~~--~~~VLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvvl~~~~~~~~~~~~~~~~~~~~~~~p~s 249 (389)
T PLN03168 172 VAKDLAENNK--GARVLAVASEVTAVTYRAPSENHLDGLVGSALFGDGAGVYVVGSDPKPEVEKALFEVHWAGETILPES 249 (389)
T ss_pred HHHHHHHhCC--CCEEEEEEEehhhhhccCcccccHHHHhccccccCccEEEEEecCCCCccCCcceEEEeeeeEEEcCC
Confidence 9999999994 4999999999983 3221 246899999999999986421 1 11100000 01
Q ss_pred cccccccccCCCCccccccCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccCcceeeccccchHHHHHHHHHhcchhh
Q 018518 191 SHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDF 270 (354)
Q Consensus 191 ~~~~~~~~p~~~~~~~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~did~~v~Hq~n~~i~~~~~~~l~~~~~ 270 (354)
.+...+.....+..+.. .+.+.....+.+..+++++++.. |+...|+++|++||+|.+|++.+.++|++++
T Consensus 250 ~~~~~~~~~~~g~~~~l--~~~vp~~i~~~~~~~l~~~l~~~------~~~~~d~~~~v~Hqgg~~Il~~v~~~Lgl~~- 320 (389)
T PLN03168 250 DGAIDGHLTEAGLIFHL--MKDVPGLISKNIEKFLNEARKCV------GSPDWNEMFWAVHPGGPAILDQVEAKLKLTK- 320 (389)
T ss_pred CCccCceEecCceEEEE--CHHHHHHHHHHHHHHHHHHHHhc------CCCccccceEEecCCcHHHHHHHHHHcCCCH-
Confidence 11111000000111110 12223333444455555555443 5666788999999999999999999999852
Q ss_pred hcccCchhhHHhhhcCCCCCCCccccccchHHHHHHHHHHHHHHHhhcccccccccccCccchhHHHhHHHhhhc
Q 018518 271 LRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLH 345 (354)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~~s~~~~~~~GN~~saSi~~~L~~~l~ 345 (354)
+|+..|+.++++||||||||||++|.++++
T Consensus 321 ---------------------------------------------ek~~~s~~vl~~yGNtSSaSv~~vL~~~~~ 350 (389)
T PLN03168 321 ---------------------------------------------DKMQGSRDILSEFGNMSSASVLFVLDQIRQ 350 (389)
T ss_pred ---------------------------------------------HHHHHHHHHHHHhCccHhhhHHHHHHHHHH
Confidence 788888778899999999999999999874
No 24
>PLN03172 chalcone synthase family protein; Provisional
Probab=100.00 E-value=2.2e-42 Score=338.56 Aligned_cols=279 Identities=14% Similarity=0.160 Sum_probs=206.2
Q ss_pred ceEEeEEEEEcCCccccHHHHHHhhC----C---Cc-ch----he--eccccEEEeecC------CC-------------
Q 018518 8 NVGILALDIYFPPTCVLQEALEVHDG----V---SK-GK----YT--VGLGQDCMAFCS------EV------------- 54 (354)
Q Consensus 8 ~v~I~~ig~~lP~~~v~~e~l~~~~~----~---~~-~~----~~--~gig~r~~~~~~------~~------------- 54 (354)
.+.|.++|+++|++.++|+++.+++. . +. ++ +. +||..|+..+.+ +.
T Consensus 16 ~~~I~~igta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r~ 95 (393)
T PLN03172 16 PATILAIGKATPANCVSQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYMAPSLDARQ 95 (393)
T ss_pred CeEEEEEEecCCCccccHHHHHHHHHHHhcccCchHHHHHHHHHHHhcCCCceeEeccchhhhhCccccccCCCCHHHHH
Confidence 37899999999999999999987652 1 11 11 21 566666654421 00
Q ss_pred ----CCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeE-EeecCcChhHHHHHH
Q 018518 55 ----EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEG-VDSTNACYGGTAALF 129 (354)
Q Consensus 55 ----e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~-~di~~~C~g~~~aL~ 129 (354)
+.+.+||++|+++||+++|++++|||+||++|+|+.. .|+++++|+++||+ ++.+.+ +|++.||+||++||.
T Consensus 96 ~~~~~~a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~-~P~~a~~l~~~LGl--~~~~~~~~~~~~gC~g~~~aL~ 172 (393)
T PLN03172 96 DMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVD-MPGADYQLTKLLGL--KPSVKRFMMYQQGCFAGGTVLR 172 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCc-CchHHHHHHHHhCC--CCCceEEeeeCCchHHHHHHHH
Confidence 1145899999999999999999999999999999865 89999999999999 566655 688999999999999
Q ss_pred HHHHHHHhCCCCCCEEEEEEeeccc--c---CCC-----CCCccccceeEEEEEccCCCc-------eeeecc--eeecc
Q 018518 130 NCVNWVESASWDGRYGLVVCTDSAV--Y---AEG-----PARPTGGAAAVAMLIGPDAPI-------AFESKL--RGSHM 190 (354)
Q Consensus 130 ~A~~~l~sg~~~~~~vLVV~~e~~~--~---~~~-----~~~~lfGDGAaA~lL~~~~~~-------~~~~~~--~~~~~ 190 (354)
+|..+++++. .++||||++|.++ + .++ .+..||||||+|+||++++.. .+.... +..++
T Consensus 173 ~A~~~~~~~~--~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvVl~~~~~~~~~~~~~~i~~~~~~~~~~t 250 (393)
T PLN03172 173 LAKDLAENNA--GSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKIERPLFEIVSAAQTILPDS 250 (393)
T ss_pred HHHHHHHcCC--CCeEEEEEEehhhhhhcccccccHHhhhccchhcCceEEEEEecCCCCcccCceeEEeeeccEEecCC
Confidence 9999999994 4999999999984 3 222 136899999999999986421 122100 00111
Q ss_pred cccccccccCCCCccccccCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccCcceeeccccchHHHHHHHHHhcchhh
Q 018518 191 SHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDF 270 (354)
Q Consensus 191 ~~~~~~~~p~~~~~~~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~did~~v~Hq~n~~i~~~~~~~l~~~~~ 270 (354)
++.+.+.....|.. ..+. +.+.+...+.++..++++++.. |++..|||+|++||+|.+|++.+.++|++++
T Consensus 251 ~~~~~~~i~~~G~~-~~l~-~~vp~~~~~~i~~~~~~~L~~~------gl~~~di~~~~~Hqgg~~Il~~v~~~Lgl~~- 321 (393)
T PLN03172 251 DGAIDGHLREVGLT-FHLL-KDVPGLISKNIEKSLVEAFAPI------GINDWNSIFWIAHPGGPAILDQVEIKLDLKE- 321 (393)
T ss_pred cccccceEEcCCcE-EEEe-chHHHHHHHHHHHHHHHHhhhc------CCCccccceEEecCCcHHHHHHHHHHcCCCH-
Confidence 11111111111111 1111 3344455556666666666654 6889999999999999999999999999853
Q ss_pred hcccCchhhHHhhhcCCCCCCCccccccchHHHHHHHHHHHHHHHhhcccccccccccCccchhHHHhHHHhhhc
Q 018518 271 LRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLH 345 (354)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~~s~~~~~~~GN~~saSi~~~L~~~l~ 345 (354)
+|+..|+.++++||||||||||++|.++++
T Consensus 322 ---------------------------------------------~~~~~s~~vl~~yGNtSSaSv~~vL~~~~~ 351 (393)
T PLN03172 322 ---------------------------------------------EKLRATRHVLSDYGNMSSACVLFILDEMRK 351 (393)
T ss_pred ---------------------------------------------HHHHHHHHHHHHhCccHHhHHHHHHHHHHh
Confidence 788888888899999999999999999874
No 25
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=8.2e-42 Score=326.79 Aligned_cols=281 Identities=19% Similarity=0.193 Sum_probs=230.3
Q ss_pred cceEEeEEEEEcCCccccHHHHHHhhCCCcchheeccccEEEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEec
Q 018518 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGS 86 (354)
Q Consensus 7 ~~v~I~~ig~~lP~~~v~~e~l~~~~~~~~~~~~~gig~r~~~~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t 86 (354)
+.++|.++++|+|+++++++++.+..+.+.+++...+|.++|+++.++++..+|+.+|++++|+++|+++++||.+|++|
T Consensus 2 ~~v~I~ai~~~lP~~~~~~~~~~~~~~~~~~~i~~~~gi~~r~~~~~~~~~~~la~~A~~~al~~agl~~~~id~vi~~~ 81 (319)
T PRK09352 2 MYAKILGTGSYLPERVVTNDDLEKMVDTSDEWIVTRTGIKERRIAAPDETTSDLATEAAKKALEAAGIDPEDIDLIIVAT 81 (319)
T ss_pred CceEEEEEEEECCCeEEcHHHHHHHcCCCHHHhhhhcCeEEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEc
Confidence 57899999999999999999999998877777765677777778888899999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeeccc----cCCCCCCc
Q 018518 87 ETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV----YAEGPARP 162 (354)
Q Consensus 87 ~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~~----~~~~~~~~ 162 (354)
+++++..|+.+.+|++.||+ .++++++++++|++++.||..|..+|++|.+ +++||+++|.+. +.++....
T Consensus 82 ~~~~~~~~~~~~~i~~~lG~---~~~~~~~v~~~Casg~~al~~A~~~i~~g~~--~~vLvv~~e~~s~~~~~~~~~~~~ 156 (319)
T PRK09352 82 TTPDYAFPSTACLVQARLGA---KNAAAFDLSAACSGFVYALSTADQFIRSGAY--KNVLVIGAEKLSRIVDWTDRSTCV 156 (319)
T ss_pred CCCCCCCchHHHHHHHHhCC---CCCcEeeccccchhHHHHHHHHHHHHHcCCC--CEEEEEEehhhccccCcccCCceE
Confidence 99887789999999999999 6788999999999999999999999999965 999999999973 22333457
Q ss_pred cccceeEEEEEccCCCceeeecceeecccccccccccCCCC------ccccccCcchHHHHHHHHHHHHHHHHHHHHhhh
Q 018518 163 TGGAAAVAMLIGPDAPIAFESKLRGSHMSHAYDFYKPNLAS------EYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLE 236 (354)
Q Consensus 163 lfGDGAaA~lL~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~------~~~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~ 236 (354)
+|||||+|+||++++...+......+++.....+..|.++. .+..++|+..++.+...+.++++++++++
T Consensus 157 ~~gDGaaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~---- 232 (319)
T PRK09352 157 LFGDGAGAVVLGASEEPGILSTHLGSDGSYGDLLYLPGGGSRGPASPGYLRMEGREVFKFAVRELAKVAREALEAA---- 232 (319)
T ss_pred EEeccceEEEEEEcCCCCeEEEEEEEcCCCCCeEEeCCCCCCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHc----
Confidence 99999999999987532222212334443322233343322 23456777777777777788888888876
Q ss_pred cCCCCccCcceeeccccchHHHHHHHHHhcchhhhcccCchhhHHhhhcCCCCCCCccccccchHHHHHHHHHHHHHHHh
Q 018518 237 GRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDL 316 (354)
Q Consensus 237 ~~g~~~~did~~v~Hq~n~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (354)
|++++|||||++||+|.++++.+.++|+++. +
T Consensus 233 --g~~~~di~~~~~h~~~~~~~~~~~~~lg~~~----------------------------------------------~ 264 (319)
T PRK09352 233 --GLTPEDIDWLVPHQANLRIIDATAKKLGLPM----------------------------------------------E 264 (319)
T ss_pred --CCCHHHCCEEEECCCCHHHHHHHHHHhCCCH----------------------------------------------H
Confidence 6999999999999999999999999999752 4
Q ss_pred hcccccccccccCccchhHHHhHHHhhhccc
Q 018518 317 KVQPSTLIPKQVGNMYTASLYAAFASLLHEK 347 (354)
Q Consensus 317 k~~~s~~~~~~~GN~~saSi~~~L~~~l~~~ 347 (354)
++..+ ..+|||+++|++|+.|.++++++
T Consensus 265 ~~~~~---~~~~Gn~~~a~~~~~L~~~~~~g 292 (319)
T PRK09352 265 KVVVT---VDKYGNTSAASIPLALDEAVRDG 292 (319)
T ss_pred Hhhhh---HHhhCCHHHHHHHHHHHHHHHcC
Confidence 55433 36999999999999999999876
No 26
>PLN03173 chalcone synthase; Provisional
Probab=100.00 E-value=5.4e-42 Score=335.57 Aligned_cols=279 Identities=15% Similarity=0.187 Sum_probs=208.0
Q ss_pred ceEEeEEEEEcCCccccHHHHHHhhC------CCc--ch-he-----eccccEEEeecCC----C---------------
Q 018518 8 NVGILALDIYFPPTCVLQEALEVHDG------VSK--GK-YT-----VGLGQDCMAFCSE----V--------------- 54 (354)
Q Consensus 8 ~v~I~~ig~~lP~~~v~~e~l~~~~~------~~~--~~-~~-----~gig~r~~~~~~~----~--------------- 54 (354)
.++|.++|+.+|++.++++++.+++. ..+ ++ +. +||..|+..+.+. .
T Consensus 16 ~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r~ 95 (391)
T PLN03173 16 PATIMAIGTSTPPNCVDQSTYPDYYFRITNSEHKVELKEKFKRMCEKSMIKKRYMHLTEEILKENPSVCEYMAPSLDARQ 95 (391)
T ss_pred CeEEEEEEccCCCcccCHHHHHHHHHHHhccccchhHHHHHHHHHHhCCCCeeeEeccchhhhhCcccccccCCCHHHHH
Confidence 37899999999999999999887642 111 11 21 5677666544210 0
Q ss_pred ----CCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCee-EEeecCcChhHHHHHH
Q 018518 55 ----EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIE-GVDSTNACYGGTAALF 129 (354)
Q Consensus 55 ----e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~-~~di~~~C~g~~~aL~ 129 (354)
+.+.+||++|+++||+++|++++|||+||++|+|+.. .|+++.+|+++||+ ++.+. ++|++.||+||++||.
T Consensus 96 ~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~-~P~~a~~l~~~LGl--~~~~~~~~~~~~gC~g~~~aL~ 172 (391)
T PLN03173 96 DMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVD-MPGADYQLTKLLGL--RSSVKRFMMYQQGCFAGGTVLR 172 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCc-ccHHHHHHHHHhCC--CccceeeehhcCccHHHHHHHH
Confidence 1246899999999999999999999999999999965 79999999999999 55564 5788999999999999
Q ss_pred HHHHHHHhCCCCCCEEEEEEeeccc--cC---CC-----CCCccccceeEEEEEccCCCcee-----eeccee----ecc
Q 018518 130 NCVNWVESASWDGRYGLVVCTDSAV--YA---EG-----PARPTGGAAAVAMLIGPDAPIAF-----ESKLRG----SHM 190 (354)
Q Consensus 130 ~A~~~l~sg~~~~~~vLVV~~e~~~--~~---~~-----~~~~lfGDGAaA~lL~~~~~~~~-----~~~~~~----~~~ 190 (354)
+|.++++++ +.++||||++|.+. +. ++ .+..+|||||+|+||++++...+ ...... .++
T Consensus 173 ~A~~~~~~~--~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvvl~~~~~~~~~~~~~~l~~~~~~~~~~t 250 (391)
T PLN03173 173 LAKDLAENN--KGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGSDPVLGVEKPLFELVSAAQTILPDS 250 (391)
T ss_pred HHHHHHHhC--CCCeEEEEEEehhhhhhCCccccchhhhhhhhhhcCceEEEEEeCCCCCCcCCcceEEEeeeeEEecCC
Confidence 999999999 45999999999983 32 22 13689999999999997542111 100000 111
Q ss_pred ccccccc-ccCCCCccccccCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccCcceeeccccchHHHHHHHHHhcchh
Q 018518 191 SHAYDFY-KPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFND 269 (354)
Q Consensus 191 ~~~~~~~-~p~~~~~~~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~did~~v~Hq~n~~i~~~~~~~l~~~~ 269 (354)
++...+. ... |.. ..+. +.+++.....++..++.++++. |++.+|||+|++||+|.+|++.+.++|++++
T Consensus 251 ~~~~~~~i~~~-G~~-~~l~-~~vp~~~~~~~~~~i~~~L~~~------gl~~~di~~~v~Hqgg~~Il~~v~~~LgL~~ 321 (391)
T PLN03173 251 DGAIDGHLREV-GLT-FHLL-KDVPGLISKNVEKSLTEAFKPL------GISDWNSLFWIAHPGGPAILDQVEAKLALKP 321 (391)
T ss_pred ccceeeEEEcC-ceE-EEEe-cHHHHHHHHHHHHHHHHHHHhc------CCCccccCeEEECCCcHHHHHHHHHHcCCCh
Confidence 1111111 111 111 1122 3444555566677777777765 6899999999999999999999999999852
Q ss_pred hhcccCchhhHHhhhcCCCCCCCccccccchHHHHHHHHHHHHHHHhhcccccccccccCccchhHHHhHHHhhhcc
Q 018518 270 FLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHE 346 (354)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~~s~~~~~~~GN~~saSi~~~L~~~l~~ 346 (354)
+|+..|+.++++||||||||||++|.+++++
T Consensus 322 ----------------------------------------------ekl~~s~~vl~~yGNtSSaSv~~vL~~~~~~ 352 (391)
T PLN03173 322 ----------------------------------------------EKLRATRHVLSEYGNMSSACVLFILDEMRKK 352 (391)
T ss_pred ----------------------------------------------HHHHHHHHHHHHhCcchhhHHHHHHHHHHHh
Confidence 7888887888999999999999999999963
No 27
>PLN03170 chalcone synthase; Provisional
Probab=100.00 E-value=9e-42 Score=335.23 Aligned_cols=277 Identities=14% Similarity=0.181 Sum_probs=206.3
Q ss_pred ceEEeEEEEEcCCccccHHHHHHhhC-------CCc-ch-he-----eccccEEEeecC------CC-------------
Q 018518 8 NVGILALDIYFPPTCVLQEALEVHDG-------VSK-GK-YT-----VGLGQDCMAFCS------EV------------- 54 (354)
Q Consensus 8 ~v~I~~ig~~lP~~~v~~e~l~~~~~-------~~~-~~-~~-----~gig~r~~~~~~------~~------------- 54 (354)
.++|.+||+.+|++.++++++.+++. .+. ++ +. +||..|+..+.+ ++
T Consensus 20 ~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r~ 99 (401)
T PLN03170 20 PATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLDARQ 99 (401)
T ss_pred CeEEEEEeecCCCccccHHHHHHHHHHHccccCchhHHHHHHHHHHhCCCCceeEeccccchhhCccccccCCCCHHHHH
Confidence 37899999999999999999887652 111 11 21 567766654421 00
Q ss_pred ----CCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCe-eEEeecCcChhHHHHHH
Q 018518 55 ----EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDI-EGVDSTNACYGGTAALF 129 (354)
Q Consensus 55 ----e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~-~~~di~~~C~g~~~aL~ 129 (354)
+.+.+||++|+++||+++|++++|||+||++|+|+.. .|+++++|+++||+ ++.+ .+||++.||+||++||.
T Consensus 100 ~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~-~Ps~a~~l~~~LGl--~~~~~r~~d~~~gC~G~~~aL~ 176 (401)
T PLN03170 100 DIVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVD-MPGADYQLTKMLGL--RPSVNRLMMYQQGCFAGGTVLR 176 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCC-CChHHHHHHHHhCc--CcccHHHHhhcChhHHHHHHHH
Confidence 1246799999999999999999999999999999965 89999999999999 4554 48999999999999999
Q ss_pred HHHHHHHhCCCCCCEEEEEEeeccc--cCC-C-------CCCccccceeEEEEEccCCCceeeec--ceeeccccccccc
Q 018518 130 NCVNWVESASWDGRYGLVVCTDSAV--YAE-G-------PARPTGGAAAVAMLIGPDAPIAFESK--LRGSHMSHAYDFY 197 (354)
Q Consensus 130 ~A~~~l~sg~~~~~~vLVV~~e~~~--~~~-~-------~~~~lfGDGAaA~lL~~~~~~~~~~~--~~~~~~~~~~~~~ 197 (354)
+|..+++++ +.++||||++|.+. +.+ . .+..+|||||+|+||++++...+... .+.+... ..
T Consensus 177 ~A~~l~~~~--~~~~vLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvVl~~~~~~~~~~~~~~l~~~~~----~~ 250 (401)
T PLN03170 177 VAKDLAENN--RGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERVERPLFQLVSASQ----TI 250 (401)
T ss_pred HHHHHHHcC--CCCeEEEEEEehhhhccCCcccchhhhhhhhhhhhceeEEEEEecCCcccccCCceEEeeccc----eE
Confidence 999999999 45999999999983 311 1 13579999999999998653111000 0111111 01
Q ss_pred ccCCC--Ccc-ccccC------cchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccCcceeeccccchHHHHHHHHHhcch
Q 018518 198 KPNLA--SEY-PVVDG------KLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFN 268 (354)
Q Consensus 198 ~p~~~--~~~-~~~~G------~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~did~~v~Hq~n~~i~~~~~~~l~~~ 268 (354)
.|... ..+ ..++| +.+.....+.++..+++++++. |++.+|||+|++||+|.+|++.+.++|+++
T Consensus 251 ~p~~~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~v~~~L~~~------gl~~~di~~~v~Hqgg~~il~~v~~~Lgl~ 324 (401)
T PLN03170 251 LPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPL------GITDYNSIFWVAHPGGPAILDQVEAKVGLE 324 (401)
T ss_pred ecCCcccccceEEcCCeEEEEehHHHHHHHHHHHHHHHHHHHhc------CCCccccCeEEecCCcHHHHHHHHHHcCCC
Confidence 12100 000 11122 3344455566667777777765 688999999999999999999999999975
Q ss_pred hhhcccCchhhHHhhhcCCCCCCCccccccchHHHHHHHHHHHHHHHhhcccccccccccCccchhHHHhHHHhhhc
Q 018518 269 DFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLH 345 (354)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~~s~~~~~~~GN~~saSi~~~L~~~l~ 345 (354)
+ +|+..++.++++||||||||||++|.++++
T Consensus 325 ~----------------------------------------------~~~~~s~~~l~~~GNtsSasv~~vL~~~~~ 355 (401)
T PLN03170 325 K----------------------------------------------ERMRATRHVLSEYGNMSSACVLFILDEMRK 355 (401)
T ss_pred h----------------------------------------------HHHHHHHHHHHHhCccHHhHHHHHHHHHHH
Confidence 2 788888788899999999999999999973
No 28
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=100.00 E-value=7.5e-40 Score=313.48 Aligned_cols=280 Identities=33% Similarity=0.414 Sum_probs=217.9
Q ss_pred ceEEeEEEEEcCCccccHHHHHHhhCCCcchheeccccEEEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecc
Q 018518 8 NVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSE 87 (354)
Q Consensus 8 ~v~I~~ig~~lP~~~v~~e~l~~~~~~~~~~~~~gig~r~~~~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~ 87 (354)
.++|.++++|+|+++++|+++++.++.+ ++...+|+++|++..++++..+|+.+|++++|+++|+++++||+||++++
T Consensus 1 ~v~I~~i~~~lP~~~v~~~~~~~~~~~~--~~~~~~gi~~r~~~~~~~~~~~l~~~a~~~aL~~ag~~~~~Id~li~~~~ 78 (324)
T cd00827 1 DVGIEAIGAYLPRYRVDNEELAEGLGVD--PGKYTTGIGQRHMAGDDEDVPTMAVEAARRALERAGIDPDDIGLLIVATE 78 (324)
T ss_pred CccEEEEEecCCceeecHHHHHHHhCCC--cceeeeecceeEecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcC
Confidence 3789999999999999999999988765 55555666666677678899999999999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeeccccC---CCCCCccc
Q 018518 88 TVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYA---EGPARPTG 164 (354)
Q Consensus 88 t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~~~~---~~~~~~lf 164 (354)
++++..|+.+.+|++.||+ +++.+++++++|+|++.||.+|..+|++|.+ +++|||++|.+... ......+|
T Consensus 79 ~~~~~~~~~~~~i~~~lg~---~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~--~~vlvv~~e~~~~~~~~~~~~~~~~ 153 (324)
T cd00827 79 SPIDKGKSAATYLAELLGL---TNAEAFDLKQACYGGTAALQLAANLVESGPW--RYALVVASDIASYLLDEGSALEPTL 153 (324)
T ss_pred CCCCCCccHHHHHHHHcCC---CCCceeehhhhhHHHHHHHHHHHHHHHcCCC--CEEEEEEEHHhhhcccCCCCccccc
Confidence 8887789999999999999 5899999999999999999999999999965 99999999998432 23457899
Q ss_pred cceeEEEEEccCCC---ceeeecceeeccccc------ccccccCC----CCccccccC--cchHHHHHHHHHHHHHHHH
Q 018518 165 GAAAVAMLIGPDAP---IAFESKLRGSHMSHA------YDFYKPNL----ASEYPVVDG--KLSQTCYLMALDSCYKYFC 229 (354)
Q Consensus 165 GDGAaA~lL~~~~~---~~~~~~~~~~~~~~~------~~~~~p~~----~~~~~~~~G--~~~~~~~~~~~~~~~~~~l 229 (354)
||||+|+||++++. ..+......+++... .....+.+ ....+.+++ ....+.+...+..+++..+
T Consensus 154 gdgaaA~ll~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 233 (324)
T cd00827 154 GDGAAAMLVSRNPGILAAGIVSTHSTSDPGYDFSPYPVMDGGYPKPCKLAYAIRLTAEPAGRAVFEAAHKLIAKVVRKAL 233 (324)
T ss_pred cCceEEEEEecCcccccCCceeeeeecccccccCccceeccCCCcchhhhhhcceeecCCccchHHHHhHHHHHHHHHHH
Confidence 99999999998764 233322233333211 11111100 011233454 3444555666677777777
Q ss_pred HHHHhhhcCCCCccCcceeeccccch-HHHHHHHHHhcchhhhcccCchhhHHhhhcCCCCCCCccccccchHHHHHHHH
Q 018518 230 QKFEKLEGRQFSMLDVDYFVFHSPYN-KLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQ 308 (354)
Q Consensus 230 ~~~~~~~~~g~~~~did~~v~Hq~n~-~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 308 (354)
++. |++ +|||+|+|||+|. ++++.+.++|+++.
T Consensus 234 ~~~------~~~-~~i~~~~~h~~~~~~~~~~~~~~l~~~~--------------------------------------- 267 (324)
T cd00827 234 DRA------GLS-EDIDYFVPHQPNGKKILEAVAKKLGGPP--------------------------------------- 267 (324)
T ss_pred HHc------ccc-cccceeeccCchHHHHHHHHHHHccchH---------------------------------------
Confidence 665 588 9999999999999 99999999999752
Q ss_pred HHHHHHHhhccccc-ccccccCccchhHHHhHHHhhhccc
Q 018518 309 VAKQLYDLKVQPST-LIPKQVGNMYTASLYAAFASLLHEK 347 (354)
Q Consensus 309 ~~~~~~~~k~~~s~-~~~~~~GN~~saSi~~~L~~~l~~~ 347 (354)
+++..+. ..+++||||+|||+|+.|.++++++
T Consensus 268 -------~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~~ 300 (324)
T cd00827 268 -------EKASQTRWILLRRVGNMYAASILLGLASLLESG 300 (324)
T ss_pred -------hhhccchhhHHHHhCchHHHHHHHHHHHHHhcC
Confidence 3443332 1357999999999999999999876
No 29
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=9.9e-40 Score=319.14 Aligned_cols=279 Identities=16% Similarity=0.102 Sum_probs=209.2
Q ss_pred ceEEeEEEEEcCCccccHHHHHHhhC------------------------CCcchheeccccEEEeecCC----------
Q 018518 8 NVGILALDIYFPPTCVLQEALEVHDG------------------------VSKGKYTVGLGQDCMAFCSE---------- 53 (354)
Q Consensus 8 ~v~I~~ig~~lP~~~v~~e~l~~~~~------------------------~~~~~~~~gig~r~~~~~~~---------- 53 (354)
+++|.++|+|+|+++++|+|+.+.++ .+.+|+...+|+++|++..+
T Consensus 2 ~~~I~~~g~~lP~~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~ 81 (372)
T PRK07515 2 NVVISGTGLYTPPESISNEELVASFNAYVERFNAENAAAIAAGEVEALQPSSSEFIEKASGIKSRYVMDKEGILDPDRMR 81 (372)
T ss_pred CcEEEEEEeecCCccccHHHHHHHHhhhhhhhcccchhhhccccccccCCCCHHHhhhccCCceEEEecccccCcccccC
Confidence 57899999999999999999987642 12456654455555555432
Q ss_pred --------C--CCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChh
Q 018518 54 --------V--EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYG 123 (354)
Q Consensus 54 --------~--e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g 123 (354)
. ....+|+.+|+++||+++|+++++||.||++|+++++..|+.+..|++.||+ + +.++|++.+|+|
T Consensus 82 ~~~~~r~~~~~~~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl---~-~~~~~v~~aCas 157 (372)
T PRK07515 82 PRIPERSNDELSIQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGI---E-GFAFDMNVACSS 157 (372)
T ss_pred cccccccccchhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCC---C-CcEEEecchhHH
Confidence 1 1346899999999999999999999999999998888889999999999998 3 578999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCEEEEEEeeccc----cCCCCCCccccceeEEEEEccCCC------ceeeecceeeccccc
Q 018518 124 GTAALFNCVNWVESASWDGRYGLVVCTDSAV----YAEGPARPTGGAAAVAMLIGPDAP------IAFESKLRGSHMSHA 193 (354)
Q Consensus 124 ~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~~----~~~~~~~~lfGDGAaA~lL~~~~~------~~~~~~~~~~~~~~~ 193 (354)
+++||.+|..+|++|.+ ++||||++|.+. +.++++..+|||||+|+||++.+. ..+......+...+.
T Consensus 158 g~~al~~A~~~i~~g~~--~~vLvv~~e~~s~~~~~~d~~~~~lfGDgAaA~vL~~~~~~~~~~~~~il~~~~~~~~~~~ 235 (372)
T PRK07515 158 ATFGIQTAANAIRSGSA--RRVLVVNPEICSGHLNFRDRDSHFIFGDVATAVIVERADTATSAGGFEILGTRLFTQFSNN 235 (372)
T ss_pred HHHHHHHHHHHHHcCCC--CEEEEEeeecccccccccCCCCCEEecCccEEEEEeeccccccCCCceEEEEEeecccccc
Confidence 99999999999999965 999999999973 344456789999999999998642 122211111111000
Q ss_pred ----ccc---cccC---CCCccccccCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccCcceeeccccchHHHHHHHH
Q 018518 194 ----YDF---YKPN---LASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFA 263 (354)
Q Consensus 194 ----~~~---~~p~---~~~~~~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~did~~v~Hq~n~~i~~~~~~ 263 (354)
..+ +.+. ....++.|+|...++.+...+.++++.+++++ |++++|||+|++||+|.+|++.+.+
T Consensus 236 ~~~~~G~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~------gl~~~dId~~~~Hq~~~~~~d~~~~ 309 (372)
T PRK07515 236 IRNNFGFLNRADPEGIGARDKLFVQEGRKVFKEVCPMVAEHIVEHLAEN------GLTPADVKRFWLHQANINMNQLIGK 309 (372)
T ss_pred eecCCCCCCCCCccccccccceEEeccHHHHHHHHHHHHHHHHHHHHHc------CCCHHHCCEEEECCCCHHHHHHHHH
Confidence 000 0110 00123456887767777777777888888775 6999999999999999999999988
Q ss_pred H-hcchhhhcccCchhhHHhhhcCCCCCCCccccccchHHHHHHHHHHHHHHHhhcccccccccccCccchhHHHhHHHh
Q 018518 264 R-LFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFAS 342 (354)
Q Consensus 264 ~-l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~~s~~~~~~~GN~~saSi~~~L~~ 342 (354)
+ +++.. +. +|.... .++||||+|||||++|.+
T Consensus 310 ~llg~~~----------------------~~----------------------~~~~~~---~~~~GNt~sasi~~~L~~ 342 (372)
T PRK07515 310 KVLGRDA----------------------TP----------------------EEAPVI---LDEYANTSSAGSIIAFHK 342 (372)
T ss_pred HhccCCC----------------------Ch----------------------hhceEe---HHhcCCchhhHHHHHHHH
Confidence 8 45421 11 444433 479999999999999999
Q ss_pred hhc
Q 018518 343 LLH 345 (354)
Q Consensus 343 ~l~ 345 (354)
+++
T Consensus 343 ~~~ 345 (372)
T PRK07515 343 HSD 345 (372)
T ss_pred Hhc
Confidence 853
No 30
>PLN02932 3-ketoacyl-CoA synthase
Probab=100.00 E-value=3.5e-39 Score=319.65 Aligned_cols=292 Identities=19% Similarity=0.268 Sum_probs=206.2
Q ss_pred CCcceEEeEEEEEcCCc--cccHHHHHHhh------C-CCc---------chhe--eccccEEEeecCCC----------
Q 018518 5 HPKNVGILALDIYFPPT--CVLQEALEVHD------G-VSK---------GKYT--VGLGQDCMAFCSEV---------- 54 (354)
Q Consensus 5 ~~~~v~I~~ig~~lP~~--~v~~e~l~~~~------~-~~~---------~~~~--~gig~r~~~~~~~~---------- 54 (354)
++..|+++..++|.|+. +++.+.+.+.. | .++ +|+. +|||.|++ ++...
T Consensus 64 ~~~~vyl~d~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~rsGig~~t~-~p~~~~~~~~~~~~~ 142 (478)
T PLN02932 64 RPKPVYLVDFSCYLPPSHLKASIQTIMGHVRRVREAGAWKQESDYLMDFCEKILERSGLGQETY-IPEGLQCLPLQQNLA 142 (478)
T ss_pred CCCcEEEEeeeeecCcccccccHHHHHHHHHhhcccCCCCccchhHHHHHHHHHHHcCCCCcee-eccccccCCHHHHHH
Confidence 56679999999999884 68888777643 2 221 1332 68988763 33211
Q ss_pred ---CCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeec-CcChhHHHHHHH
Q 018518 55 ---EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST-NACYGGTAALFN 130 (354)
Q Consensus 55 ---e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~-~~C~g~~~aL~~ 130 (354)
+.+.+|+.+|+++||+++|++|+|||+||++|+|++ ..|+++++|+++||+ ++++.+||++ .||+||++||++
T Consensus 143 ~~~~ea~~la~~Aa~~aL~~agi~p~dId~lIv~tst~~-~~Pslaa~V~~~lGl--r~~i~~fdL~gmGCSggl~aL~l 219 (478)
T PLN02932 143 VSRKETEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFN-PTPSLSSILVNKFKL--RDNIKSLNLGGMGCSAGVIAIDA 219 (478)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCC-CCCcHHHHHHHHhCC--CCCceEEEeccchhhhHHHHHHH
Confidence 237799999999999999999999999999999997 789999999999999 6689999999 599999999999
Q ss_pred HHHHHHhCCCCCCEEEEEEeeccc----cCCC----CCCccccceeEEEEEccCCC------ceee---ecceeeccccc
Q 018518 131 CVNWVESASWDGRYGLVVCTDSAV----YAEG----PARPTGGAAAVAMLIGPDAP------IAFE---SKLRGSHMSHA 193 (354)
Q Consensus 131 A~~~l~sg~~~~~~vLVV~~e~~~----~~~~----~~~~lfGDGAaA~lL~~~~~------~~~~---~~~~~~~~~~~ 193 (354)
|.++++++ +.++||||++|.+. +.++ .++++|||||+|+||++++. +.+. ..+.++++..+
T Consensus 220 A~~ll~~~--~~~~aLVVstE~~S~~~~~~d~r~~l~t~~LFgDGAAAvlLs~~~~~~~~~~~~L~~~v~t~~~ad~~~~ 297 (478)
T PLN02932 220 AKSLLQVH--RNTYALVVSTENITQNLYLGNNKSMLVTNCLFRIGGAAILLSNRSRDRKRAKYELVHTVRVHTGADDRSY 297 (478)
T ss_pred HHHHHHcC--CCCeEEEEEEeecccccCCCcchhhhccceeecccceEEEEecccccccCcceEEEeeeeeeeccCCCcc
Confidence 99999999 45999999999982 2232 25799999999999997541 1232 22333343333
Q ss_pred ccccccC--CCC-------ccc-----------cccCcchH---HHHHHHHHHHHHHHHHHHHhhhcCCCCc---cCcce
Q 018518 194 YDFYKPN--LAS-------EYP-----------VVDGKLSQ---TCYLMALDSCYKYFCQKFEKLEGRQFSM---LDVDY 247 (354)
Q Consensus 194 ~~~~~p~--~~~-------~~~-----------~~~G~~~~---~~~~~~~~~~~~~~l~~~~~~~~~g~~~---~did~ 247 (354)
.....+. .|. +.+ .+.|..+. +.....+....+++.+... .++.+ ++|||
T Consensus 298 ~~v~~~~d~~G~~g~~Lsk~lp~~~~~al~~ni~~~~p~v~p~~e~~~~~~~~~~~~~~k~~~----~~~~~~~~~~id~ 373 (478)
T PLN02932 298 ECATQEEDEDGIVGVSLSKNLPMVAARTLKINIATLGPLVLPLSEKFHFFVRFVKKKFFNPKL----KHYIPDFKLAFEH 373 (478)
T ss_pred ccceeecccCCcceeeECccchHHHHHHHhhhhhccccccccchhhhHHHHHHhHHHHHHHHh----hcCcHhHHhhhce
Confidence 2222321 110 001 11122110 1111112222222222110 12333 68999
Q ss_pred eeccccchHHHHHHHHHhcchhhhcccCchhhHHhhhcCCCCCCCccccccchHHHHHHHHHHHHHHHhhcccccccccc
Q 018518 248 FVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQ 327 (354)
Q Consensus 248 ~v~Hq~n~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~~s~~~~~~ 327 (354)
|++||+|++|++.+.++|++++ +++.+++.++++
T Consensus 374 f~iHqggr~IIdav~k~LgL~~----------------------------------------------~~~e~s~~tL~r 407 (478)
T PLN02932 374 FCIHAGGRALIDEMEKNLHLTP----------------------------------------------LDVEASRMTLHR 407 (478)
T ss_pred EEEccCCHHHHHHHHHHcCCCh----------------------------------------------HHHHHHHHHHHH
Confidence 9999999999999999999863 566677777899
Q ss_pred cCccchhHHHhHHHhhhcccCccccCC
Q 018518 328 VGNMYTASLYAAFASLLHEKHSSLVSG 354 (354)
Q Consensus 328 ~GN~~saSi~~~L~~~l~~~~~~~~~~ 354 (354)
||||||+|||++|+.+.+++ .+++|
T Consensus 408 fGNTSSaSI~~~L~~~ea~g--rik~G 432 (478)
T PLN02932 408 FGNTSSSSIWYELAYTEAKG--RMKKG 432 (478)
T ss_pred hCChhhhHHHHHHHHHHHcC--CCCCC
Confidence 99999999999999998766 44444
No 31
>PLN02854 3-ketoacyl-CoA synthase
Probab=100.00 E-value=4.6e-39 Score=320.50 Aligned_cols=290 Identities=16% Similarity=0.232 Sum_probs=209.7
Q ss_pred CCcceEEeEEEEEcCCc--cccHHHHHHhh---C-CCcch------he--eccccEEEeecC------CC-------CCH
Q 018518 5 HPKNVGILALDIYFPPT--CVLQEALEVHD---G-VSKGK------YT--VGLGQDCMAFCS------EV-------EDV 57 (354)
Q Consensus 5 ~~~~v~I~~ig~~lP~~--~v~~e~l~~~~---~-~~~~~------~~--~gig~r~~~~~~------~~-------e~~ 57 (354)
++..|+++..++|-|+. +++.+.+.+.. | .+++. +. +|+|.+.+ +++ ++ +.+
T Consensus 110 ~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sg~g~~ty-~P~~~~~~~~~~~~~~~r~ea 188 (521)
T PLN02854 110 RSKPVYLVDFACYKPEDERKISVDSFLTMTEENGSFEDETVQFQRRISTRSGLGDETY-LPRGITSRPPNLCMEEARAEA 188 (521)
T ss_pred CCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCccc-cCccccCCCCcchHHHHHHHH
Confidence 45679999999999874 68888777653 3 23332 11 78997753 321 21 224
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeec-CcChhHHHHHHHHHHHHH
Q 018518 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST-NACYGGTAALFNCVNWVE 136 (354)
Q Consensus 58 ~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~-~~C~g~~~aL~~A~~~l~ 136 (354)
......|+++||+++|++|+|||+||+ ++|+++..|+++++|+++||+ ++++.+||++ .||+||++||++|.++++
T Consensus 189 ~~v~~~~~~~lL~kaGi~p~dID~LIv-~cS~~~p~PSlAa~I~n~LGl--r~~i~afdLsgmGCSggl~aL~lA~~lL~ 265 (521)
T PLN02854 189 EAVMFGALDSLFSKTGVKPRDIGILIV-NCSLFNPTPSLSAMIVNHYKL--RTDIKSYNLGGMGCSAGLISIDLANDLLK 265 (521)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE-ECCCCCCCCCHHHHHHHHhCC--CCCceEEecccchhhhHHHHHHHHHHHHH
Confidence 566788999999999999999999998 478988899999999999999 5689999999 599999999999999999
Q ss_pred hCCCCCCEEEEEEeecc--cc---CCCCC---CccccceeEEEEEccCC-C-----c---eeeecceeeccccccccccc
Q 018518 137 SASWDGRYGLVVCTDSA--VY---AEGPA---RPTGGAAAVAMLIGPDA-P-----I---AFESKLRGSHMSHAYDFYKP 199 (354)
Q Consensus 137 sg~~~~~~vLVV~~e~~--~~---~~~~~---~~lfGDGAaA~lL~~~~-~-----~---~~~~~~~~~~~~~~~~~~~p 199 (354)
++ +.++||||++|.+ ++ +++++ +++|||||+|+||++.+ . . .+...+.+++++.+.....+
T Consensus 266 ~~--~~~~aLVVstE~~S~~~y~g~Drs~lv~~~LFgDGAAAvlLs~~~~~~~~~k~~L~~~v~t~~~ad~~~~~~i~~~ 343 (521)
T PLN02854 266 AN--PNSYAVVVSTENITLNWYFGNDRSMLLCNCIFRMGGAAVLLSNKARDRKRSKYQLVHTVRTHKGADDKNYNCVYQR 343 (521)
T ss_pred hC--CCCeEEEEEEeeeecCCCCCCchhhhcceeeeccceeEEEEecccccccccchheeeEEEEEEeeCCCccCeEEec
Confidence 99 4599999999998 45 45554 78999999999999753 1 1 12223445555433333333
Q ss_pred C--CCC------------------ccccccCcchHHHHHHH--HHHHHHHHHHHHHhhhcCCCCc------cCcceeecc
Q 018518 200 N--LAS------------------EYPVVDGKLSQTCYLMA--LDSCYKYFCQKFEKLEGRQFSM------LDVDYFVFH 251 (354)
Q Consensus 200 ~--~~~------------------~~~~~~G~~~~~~~~~~--~~~~~~~~l~~~~~~~~~g~~~------~did~~v~H 251 (354)
. .|. ..+.+.|..++...... ....+++.+.+ .|+++ +|||||++|
T Consensus 344 ~d~~G~~g~~lsk~l~~va~~~l~~~i~~~g~~Vl~~se~~~f~~~~i~~~L~~------~gl~~~~pd~~~didhf~iH 417 (521)
T PLN02854 344 EDDKGTIGVSLARELMAVAGDALKTNITTLGPLVLPLSEQFMFFVTLVRRKLLK------AKVKPYIPDFKLAFEHFCIH 417 (521)
T ss_pred cCCCCcccccccccccchhhhhhhhhhhhccccccchHHHHHHHHHHHHHHHHH------cCCCccCCcccccCcEEEEC
Confidence 1 111 01224454433322111 12334444443 35765 699999999
Q ss_pred ccchHHHHHHHHHhcchhhhcccCchhhHHhhhcCCCCCCCccccccchHHHHHHHHHHHHHHHhhcccccccccccCcc
Q 018518 252 SPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNM 331 (354)
Q Consensus 252 q~n~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~~s~~~~~~~GN~ 331 (354)
|+|++|++.+.++|++++ +++.+++.++++||||
T Consensus 418 qggr~IId~v~k~LgL~~----------------------------------------------~~~e~sr~tL~rfGNT 451 (521)
T PLN02854 418 AGGRAVLDELQKNLQLSD----------------------------------------------WHMEPSRMTLHRFGNT 451 (521)
T ss_pred CCCHHHHHHHHHHcCCCc----------------------------------------------ccccchHHHhhhcCCh
Confidence 999999999999999863 3344455556899999
Q ss_pred chhHHHhHHHhhhcccCccccCC
Q 018518 332 YTASLYAAFASLLHEKHSSLVSG 354 (354)
Q Consensus 332 ~saSi~~~L~~~l~~~~~~~~~~ 354 (354)
||+|||++|+++.+++ .++.|
T Consensus 452 SSASI~~~L~~~~~kG--rik~G 472 (521)
T PLN02854 452 SSSSLWYELAYTEAKG--RVSAG 472 (521)
T ss_pred HhhHHHHHHHHHHHcC--CCCCC
Confidence 9999999999998877 45554
No 32
>PLN02377 3-ketoacyl-CoA synthase
Probab=100.00 E-value=5.9e-39 Score=319.69 Aligned_cols=292 Identities=16% Similarity=0.232 Sum_probs=205.8
Q ss_pred CCcceEEeEEEEEcCCc--cccHHHHHHhh---C-CCcch------he--eccccEEEeec------CCC-------CCH
Q 018518 5 HPKNVGILALDIYFPPT--CVLQEALEVHD---G-VSKGK------YT--VGLGQDCMAFC------SEV-------EDV 57 (354)
Q Consensus 5 ~~~~v~I~~ig~~lP~~--~v~~e~l~~~~---~-~~~~~------~~--~gig~r~~~~~------~~~-------e~~ 57 (354)
++..|+++..++|.|+. +++.+.+.+.. | .+++. +. +|+|.+ -+++ +++ +.+
T Consensus 94 ~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sgig~~-t~~p~~~~~~~~~~~~~~~~~ea 172 (502)
T PLN02377 94 RPRPVYLVDYSCYRAPDHLKAPFARFMEHSRLTGDFDDSSLEFQRKILERSGLGED-TYVPEAMHYIPPRPSMAAAREEA 172 (502)
T ss_pred CCCCEEEEeeeeecCCccccccHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCCCc-cccCchhccCCccchHHHHHHHH
Confidence 45679999999999984 68888777653 3 23331 21 688873 3343 121 346
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecC-cChhHHHHHHHHHHHHH
Q 018518 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTN-ACYGGTAALFNCVNWVE 136 (354)
Q Consensus 58 ~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~-~C~g~~~aL~~A~~~l~ 136 (354)
.+++..|+++||+++|++|+|||+||+ |+|+++..|+++++|+++||+ ++++.+||+++ ||+||++||++|.++++
T Consensus 173 ~~l~~~A~~~aL~kaGi~p~dID~LVv-~cS~~~~~PSlaa~V~~~LGl--r~~v~afdL~gmGCsggl~aL~lA~~ll~ 249 (502)
T PLN02377 173 EQVMFGALDNLFANTNVNPKDIGILVV-NCSLFNPTPSLSAMIVNKYKL--RGNIRSFNLGGMGCSAGVIAVDLAKDMLQ 249 (502)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE-ECCCCCCCCcHHHHHHHHhCC--CCCCeEEecccchhhHHHHHHHHHHHHHH
Confidence 789999999999999999999999987 899998999999999999999 66899999995 99999999999999999
Q ss_pred hCCCCCCEEEEEEeeccc----cCCCCC----CccccceeEEEEEccCCC------c---eeeecceeeccccccccccc
Q 018518 137 SASWDGRYGLVVCTDSAV----YAEGPA----RPTGGAAAVAMLIGPDAP------I---AFESKLRGSHMSHAYDFYKP 199 (354)
Q Consensus 137 sg~~~~~~vLVV~~e~~~----~~~~~~----~~lfGDGAaA~lL~~~~~------~---~~~~~~~~~~~~~~~~~~~p 199 (354)
++. .++||||++|.+. +.++.+ +++|||||+|+||++.+. . .+...+.+++++.+...+.+
T Consensus 250 ~~~--~~~aLVVstE~~S~~~~~~d~~s~lv~n~LFgDGAaAvlLs~~~~~~~~a~~~l~~iv~t~~~~d~~~~~~i~~~ 327 (502)
T PLN02377 250 VHR--NTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKSRDKRRSKYKLVHVVRTHRGADDKAFRCVYQE 327 (502)
T ss_pred cCC--CCEEEEEEEeccccccCCCCCccccccceeeccccEEEEEecccccccccccccceEEEEEEEEcCCccceeeec
Confidence 994 5999999999972 334433 589999999999997421 1 23333444544433322322
Q ss_pred ---CCCC------ccccc-----------cCcchHHH----HHHHHHHHHHHHHHHHHhhhc-CC-CCccCcceeecccc
Q 018518 200 ---NLAS------EYPVV-----------DGKLSQTC----YLMALDSCYKYFCQKFEKLEG-RQ-FSMLDVDYFVFHSP 253 (354)
Q Consensus 200 ---~~~~------~~~~~-----------~G~~~~~~----~~~~~~~~~~~~l~~~~~~~~-~g-~~~~did~~v~Hq~ 253 (354)
.++. +.+.+ .|..++.. +..+.. .+..+.++. ++ .+ ...+|||||++||+
T Consensus 328 ~d~~G~~g~~ls~dl~~v~g~~l~~~i~~lg~~vl~~se~~~~~a~~-~~~~~~~~~---l~~~~p~~~~didhf~iHqg 403 (502)
T PLN02377 328 QDDAGKTGVSLSKDLMAIAGEALKTNITTLGPLVLPISEQLLFFATL-VVKKLFNKK---MKPYIPDFKLAFDHFCIHAG 403 (502)
T ss_pred cccCCCCCCCCCcchhhHhhHHHHHHHHHhcccccchHHHHHHHHHH-HHHHHHHHH---HhhccCCcHhhcCEEEECCC
Confidence 2221 11122 23322110 111111 111111111 11 11 34689999999999
Q ss_pred chHHHHHHHHHhcchhhhcccCchhhHHhhhcCCCCCCCccccccchHHHHHHHHHHHHHHHhhcccccccccccCccch
Q 018518 254 YNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYT 333 (354)
Q Consensus 254 n~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~~s~~~~~~~GN~~s 333 (354)
|++|++.+.++|++++ +++.+++.++++||||||
T Consensus 404 gr~IId~v~k~LgL~~----------------------------------------------~~~e~sr~tL~r~GNTSS 437 (502)
T PLN02377 404 GRAVIDELEKNLQLLP----------------------------------------------VHVEASRMTLHRFGNTSS 437 (502)
T ss_pred CHHHHHHHHHHcCCCc----------------------------------------------ccchHHHHHHHhcCCchh
Confidence 9999999999999853 344455566789999999
Q ss_pred hHHHhHHHhhhcccCccccCC
Q 018518 334 ASLYAAFASLLHEKHSSLVSG 354 (354)
Q Consensus 334 aSi~~~L~~~l~~~~~~~~~~ 354 (354)
+|||++|..+.+++ .++.|
T Consensus 438 aSI~~aL~~~~~~g--rik~G 456 (502)
T PLN02377 438 SSIWYELAYIEAKG--RMRKG 456 (502)
T ss_pred hHHHHHHHHHHHcC--CCCCC
Confidence 99999999998876 44443
No 33
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.4e-38 Score=290.08 Aligned_cols=283 Identities=15% Similarity=0.174 Sum_probs=209.2
Q ss_pred eEEeEEEEEcCCccccHHHHHHhh----CCC-cch----he--eccccEEEeecCC---------------CCCHHHHHH
Q 018518 9 VGILALDIYFPPTCVLQEALEVHD----GVS-KGK----YT--VGLGQDCMAFCSE---------------VEDVISMSL 62 (354)
Q Consensus 9 v~I~~ig~~lP~~~v~~e~l~~~~----~~~-~~~----~~--~gig~r~~~~~~~---------------~e~~~~La~ 62 (354)
..|.++++++|+++++|.|+...+ ..+ -+. +. .+|..|+...+.. -|.+.+|++
T Consensus 2 a~i~sv~t~~Ppy~~~Qse~~d~f~~~~~~~~~~~I~r~l~~~~~i~~R~~v~Pl~~y~e~~~f~ekN~ifie~a~~l~v 81 (356)
T COG3424 2 AVIASVATALPPYRYNQSEITDSFAELPFQEGREDIPRVLHANAQINRRHLVLPLDWYREPHGFGEKNEIFIEEAVPLGV 81 (356)
T ss_pred ceeeecccCCCccccchHHHHHHHHHhccccchHHHHHHHhhccccccceecccHhhccCCCChhhhhhhHHHHHHHHHH
Confidence 469999999999999997776543 111 122 22 2344444322210 134789999
Q ss_pred HHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecC-cChhHHHHHHHHHHHHHhCCCC
Q 018518 63 TVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTN-ACYGGTAALFNCVNWVESASWD 141 (354)
Q Consensus 63 ~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~-~C~g~~~aL~~A~~~l~sg~~~ 141 (354)
+|.++||+.+++.|+|||+|+++|+|+. ..|++.++|.++||+ ++++.++.+.+ ||+++..||..|++|++++ |
T Consensus 82 ~a~r~aL~~~~l~pedId~vv~vtsTG~-~~Ps~dari~~~Lgl--~p~~~Rvpv~glGCaaga~glara~~y~ra~--P 156 (356)
T COG3424 82 DALRRALDGSPLRPEDIDAVVTVTSTGL-ATPSLDARIVGELGL--SPDTRRVPVWGLGCAAGAAGLARARDYCRAA--P 156 (356)
T ss_pred HHHHHHhccCCCCHHHCcEEEEEeeccc-cCCChhHHHHhhcCC--CCccceeeeecchhhhhhhHHHHHHHHHhhC--c
Confidence 9999999999999999999999999997 579999999999999 79999999987 9999999999999999999 6
Q ss_pred CCEEEEEEeecccc----CCCC-----CCccccceeEEEEEccCCC------ceeee----cceeecccccccccccCCC
Q 018518 142 GRYGLVVCTDSAVY----AEGP-----ARPTGGAAAVAMLIGPDAP------IAFES----KLRGSHMSHAYDFYKPNLA 202 (354)
Q Consensus 142 ~~~vLVV~~e~~~~----~~~~-----~~~lfGDGAaA~lL~~~~~------~~~~~----~~~~~~~~~~~~~~~p~~~ 202 (354)
..+|||||+|.|+. .|+. ...+||||++|+|++.+.. ..... .+.-.++++.+.|-....|
T Consensus 157 ~~~vlvV~vELCSLt~~~~d~t~s~lVgtaLF~DG~AA~vv~gd~~~~~~~~~~p~i~~s~StL~~dse~~Mgwdv~d~G 236 (356)
T COG3424 157 DANVLVVCVELCSLTYVFADDTKSNLVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILDSFSTLYPDSEDIMGWDVGDQG 236 (356)
T ss_pred cceEEEEEeeeeeeeeecCCCCcccceeeeeecCCeeEEEEeccccccccCCCCceecccccccCCccccccceeecCCc
Confidence 79999999999942 2321 3689999999999998642 11110 0111222233322221111
Q ss_pred CccccccCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccCcceeeccccchHHHHHHHHHhcchhhhcccCchhhHHh
Q 018518 203 SEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAK 282 (354)
Q Consensus 203 ~~~~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~did~~v~Hq~n~~i~~~~~~~l~~~~~~~~~~~~~~~~~ 282 (354)
+-..-.+..-+.....+...+..++... |++.+||+.|+.|++++||++++.+.|++++
T Consensus 237 --~~~vlSrdlp~lIe~~l~~~V~~fL~~~------~ls~~dI~~w~~HPGG~KVida~~~sLgls~------------- 295 (356)
T COG3424 237 --LKVVLSRDLPNLIESYLAPNVTTFLATH------GLSIEDIEAWVVHPGGPKVIDAYEESLGLSP------------- 295 (356)
T ss_pred --EEEEEcCchhHHHHHHhhhhHHHHHHHc------CCchhhhceeeeCCCCchHHHHHHHhcCCCH-------------
Confidence 1111111111222334455666777664 6999999999999999999999999999863
Q ss_pred hhcCCCCCCCccccccchHHHHHHHHHHHHHHHhhcccccccccccCccchhHHHhHHHhhhcccCcc
Q 018518 283 EKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSS 350 (354)
Q Consensus 283 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~~s~~~~~~~GN~~saSi~~~L~~~l~~~~~~ 350 (354)
+++..|+.++++|||||||||.++|.+.++++.++
T Consensus 296 ---------------------------------e~l~~s~~~L~~~GNMSSatvLfVL~d~l~~~~~~ 330 (356)
T COG3424 296 ---------------------------------EALELSWDVLREYGNMSSATVLFVLEDTLQKAPKS 330 (356)
T ss_pred ---------------------------------HHHHHHHHHHHHhCCccchhhHHHHHHHHHhcCCC
Confidence 77888889999999999999999999999986443
No 34
>PLN02192 3-ketoacyl-CoA synthase
Probab=100.00 E-value=6.3e-37 Score=304.62 Aligned_cols=280 Identities=16% Similarity=0.265 Sum_probs=197.3
Q ss_pred CCcceEEeEEEEEcCCc--cccHHHHHHhh---C-CCcch------he--eccccEEEeecC------CC-------CCH
Q 018518 5 HPKNVGILALDIYFPPT--CVLQEALEVHD---G-VSKGK------YT--VGLGQDCMAFCS------EV-------EDV 57 (354)
Q Consensus 5 ~~~~v~I~~ig~~lP~~--~v~~e~l~~~~---~-~~~~~------~~--~gig~r~~~~~~------~~-------e~~ 57 (354)
++..|+++..++|-|+. +++.+.+.+.. | .+++. +. +|+|.+.+ +++ ++ +.+
T Consensus 98 ~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sglg~~t~-~p~~~~~~~~~~~~~~~~~Ea 176 (511)
T PLN02192 98 RPRPVYLVDFSCYKPDDSRKCTRKIFMDRSKLTGSFTEENLEFQRKILERSGLGESTY-LPEAVLNVPPNPCMAEARKEA 176 (511)
T ss_pred CCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCccc-CChhhccCCCCccHHHHHHHH
Confidence 45679999999999985 68888877654 2 23331 11 78987653 321 22 235
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecC-cChhHHHHHHHHHHHHH
Q 018518 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTN-ACYGGTAALFNCVNWVE 136 (354)
Q Consensus 58 ~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~-~C~g~~~aL~~A~~~l~ 136 (354)
..+...|+++||+++|++|+|||+||++ +++++..|+++++|+++||+ +.++.+||+++ ||+||++||++|.++++
T Consensus 177 ~~~~~~Aa~~aL~kaGi~p~DIDiLIv~-~S~~~~~PSlaa~I~n~lGl--r~~i~afdLsgmGCSggl~aLdlA~~lL~ 253 (511)
T PLN02192 177 ETVMFGAIDQLLAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKL--RGNILSYNLGGMGCSAGLISIDLAKHLLQ 253 (511)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEE-CCCCCCCchHHHHHHHHhCC--CCCceEEEcccchhhhHHHHHHHHHHHHH
Confidence 6789999999999999999999999987 56888899999999999999 56899999995 99999999999999999
Q ss_pred hCCCCCCEEEEEEeecc--cc---CCCCC---CccccceeEEEEEccCCC------ceee---ecceeeccccccccccc
Q 018518 137 SASWDGRYGLVVCTDSA--VY---AEGPA---RPTGGAAAVAMLIGPDAP------IAFE---SKLRGSHMSHAYDFYKP 199 (354)
Q Consensus 137 sg~~~~~~vLVV~~e~~--~~---~~~~~---~~lfGDGAaA~lL~~~~~------~~~~---~~~~~~~~~~~~~~~~p 199 (354)
++ +.++||||++|.+ +| ++++. +++|||||+|+||++.+. .++. ..+.++++..+...+.+
T Consensus 254 a~--~~~~aLVVstE~~S~n~y~g~drs~lv~n~LFgDGAaAvLLs~~~~~~~~~k~~L~~~vrt~~~~dd~~~~~v~~~ 331 (511)
T PLN02192 254 VH--PNSYALVISMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNKRSDRRRSKYQLVHTVRTHKGADDKCFACVTQE 331 (511)
T ss_pred cC--CCCeEEEEEEEeccccCCCCCCHHHHhccccccccceEEEEeccccccccccceeeeeEEEEecCChhhccceecc
Confidence 99 4599999999998 34 34443 379999999999998431 1222 11222222221111111
Q ss_pred C---CC------Cc-----------------------------cccccCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 018518 200 N---LA------SE-----------------------------YPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFS 241 (354)
Q Consensus 200 ~---~~------~~-----------------------------~~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~ 241 (354)
. ++ .+ +..|+|+.. +...+...+. ..
T Consensus 332 ed~~g~~g~~Lskdl~~vag~al~~ni~~l~p~vlp~~e~~~~~~~m~gr~v---fk~~~~~~~p----~~--------- 395 (511)
T PLN02192 332 EDSAGKIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKL---FKMKLKPYIP----DF--------- 395 (511)
T ss_pred cccccceeeEecchhhhhhhhhhhhhhhhcccccCccchhhceeEEEcChHH---HHHHhhhccH----HH---------
Confidence 0 00 00 011223221 1111111111 11
Q ss_pred ccCcceeeccccchHHHHHHHHHhcchhhhcccCchhhHHhhhcCCCCCCCccccccchHHHHHHHHHHHHHHHhhcccc
Q 018518 242 MLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPS 321 (354)
Q Consensus 242 ~~did~~v~Hq~n~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~~s 321 (354)
..+||||++||+|++|++.+.++|++++ +++.++
T Consensus 396 ~~~Idhf~iHqggr~IId~v~k~LgL~~----------------------------------------------~~~e~s 429 (511)
T PLN02192 396 KLAFEHFCIHAGGRAVLDELEKNLQLSD----------------------------------------------WHMEPS 429 (511)
T ss_pred HHhhceEeeccCCHHHHHHHHHHcCCCc----------------------------------------------hhhhHH
Confidence 1479999999999999999999999863 333444
Q ss_pred cccccccCccchhHHHhHHHhhhcccCccccCC
Q 018518 322 TLIPKQVGNMYTASLYAAFASLLHEKHSSLVSG 354 (354)
Q Consensus 322 ~~~~~~~GN~~saSi~~~L~~~l~~~~~~~~~~ 354 (354)
+.++++||||||+|||++|+.+.+++ .++.|
T Consensus 430 r~tL~rfGNTSSaSI~~aL~~~eakg--rik~G 460 (511)
T PLN02192 430 RMTLYRFGNTSSSSLWYELAYSEAKG--RIKKG 460 (511)
T ss_pred HHHHhHcCChHHhHHHHHHHHHHHcC--CCCCC
Confidence 45568999999999999999998877 45554
No 35
>PLN00415 3-ketoacyl-CoA synthase
Probab=100.00 E-value=1.2e-34 Score=284.36 Aligned_cols=291 Identities=17% Similarity=0.225 Sum_probs=194.3
Q ss_pred CCcceEEeEEEEEcCCc--cccHHHHHHhh---C-CCcch------he--eccccEEEe---------ecC--CCCCHHH
Q 018518 5 HPKNVGILALDIYFPPT--CVLQEALEVHD---G-VSKGK------YT--VGLGQDCMA---------FCS--EVEDVIS 59 (354)
Q Consensus 5 ~~~~v~I~~ig~~lP~~--~v~~e~l~~~~---~-~~~~~------~~--~gig~r~~~---------~~~--~~e~~~~ 59 (354)
++..||++..++|-|+. +++.+.+.+.. | .+++. +. +|+|.+.+. .+. +.....+
T Consensus 56 ~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~F~~~i~~rSGlg~et~~p~~~~~~~~~~~~~~~~~e~e 135 (466)
T PLN00415 56 RSKPVYLVDFSCHQPTDSCKISSETFFNMAKGAQLYTEETIQFMTRILNRSGLGDDTYSPRCMLTSPPTPSMYEARHESE 135 (466)
T ss_pred CCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCCCCeeeCCccccCCCCCChhhhHHHHH
Confidence 45679999999999874 68888776653 2 23221 11 577765321 111 1223456
Q ss_pred HHHH-HHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecC-cChhHHHHHHHHHHHHHh
Q 018518 60 MSLT-VVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTN-ACYGGTAALFNCVNWVES 137 (354)
Q Consensus 60 La~~-Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~-~C~g~~~aL~~A~~~l~s 137 (354)
|+.. |+++||+++|++|+|||+||+ ++|+++..|++++.|+++||+ ++++.+||+++ ||+||++||.+|.+++++
T Consensus 136 m~i~~A~~~aL~~aGi~p~dID~LIv-s~T~~~~~Pslaa~l~~~LGL--r~~v~~~dL~gmGCsggv~aL~lA~~ll~a 212 (466)
T PLN00415 136 LVIFGALNSLFKKTGIEPREVGIFIV-NCSLFNPNPSLSSMIVNRYKL--KTDVKTYNLSGMGCSAGAISVDLATNLLKA 212 (466)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE-ECcCCCCCchHHHHHHHHhCC--CCCceEEEeccccchHHHHHHHHHHHHHHh
Confidence 7765 778899999999999999985 678887889999999999999 67999999998 999999999999999999
Q ss_pred CCCCCCEEEEEEeeccc--c---CCCCC---CccccceeEEEEEccCCC----ceeee-cceeecc---cccccc--ccc
Q 018518 138 ASWDGRYGLVVCTDSAV--Y---AEGPA---RPTGGAAAVAMLIGPDAP----IAFES-KLRGSHM---SHAYDF--YKP 199 (354)
Q Consensus 138 g~~~~~~vLVV~~e~~~--~---~~~~~---~~lfGDGAaA~lL~~~~~----~~~~~-~~~~~~~---~~~~~~--~~p 199 (354)
+ ++++||||++|.+. + .+++. ..+|||||+|+||++++. ..+.. ....++. ++.+.. +..
T Consensus 213 ~--~~~~aLVVs~E~~S~~~~~~~dr~~lv~n~LFgDGAAAvlLs~~~~~~~~~~~~L~~~vrt~~~~~d~~~~~~~~~~ 290 (466)
T PLN00415 213 N--PNTYAVIVSTENMTLSMYRGNDRSMLVPNCLFRVGGAAVMLSNRSQDRVRSKYELTHIVRTHKGSSDKHYTCAEQKE 290 (466)
T ss_pred C--CCCEEEEEEEecccccccCCCcHhHhccceeecccceEEEEecCcccccCccceeeeEEEecCCCChhhhcceeeee
Confidence 9 55999999999973 2 23332 589999999999998542 11111 0111111 111111 111
Q ss_pred C-CCCccccccCcchHHHHHHHHHHHHHHHHHHH--------------H-hhhcCCCCc--cC----cceeeccccchHH
Q 018518 200 N-LASEYPVVDGKLSQTCYLMALDSCYKYFCQKF--------------E-KLEGRQFSM--LD----VDYFVFHSPYNKL 257 (354)
Q Consensus 200 ~-~~~~~~~~~G~~~~~~~~~~~~~~~~~~l~~~--------------~-~~~~~g~~~--~d----id~~v~Hq~n~~i 257 (354)
+ .|... ..-++.+..+..+++...+..+.... . ...+..+++ .| ++||++|+++++|
T Consensus 291 d~~G~~g-v~Lsk~lp~va~~~l~~ni~~l~p~vlp~~e~~~~~~~~i~~~~~~~~~~~~~pd~~~~~~hf~iHpGGraV 369 (466)
T PLN00415 291 DSKGIVG-VALSKELTVVAGDTLKTNLTALGPLVLPLSEKLRFILFLVKSKLFRLKVSPYVPDFKLCFKHFCIHAGGRAL 369 (466)
T ss_pred cCCCcce-EEEChHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHhhhhhhccCCCCCCCccccceeEEecCCcHHH
Confidence 0 01000 00111122222233332222221110 0 000011222 23 8899999999999
Q ss_pred HHHHHHHhcchhhhcccCchhhHHhhhcCCCCCCCccccccchHHHHHHHHHHHHHHHhhcccccccccccCccchhHHH
Q 018518 258 VQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLY 337 (354)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~~s~~~~~~~GN~~saSi~ 337 (354)
++.+.+.|++++ +++.+|+.++++||||||+||+
T Consensus 370 Ldave~~LgL~~----------------------------------------------~~le~Sr~vL~r~GN~SSsSV~ 403 (466)
T PLN00415 370 LDAVEKGLGLSE----------------------------------------------FDLEPSRMTLHRFGNTSSSSLW 403 (466)
T ss_pred HHHHHHHcCCCH----------------------------------------------HHHHHHHHHHHHhCCchhhhHH
Confidence 999999999863 7888899999999999999999
Q ss_pred hHHHhhhccc
Q 018518 338 AAFASLLHEK 347 (354)
Q Consensus 338 ~~L~~~l~~~ 347 (354)
++|+.+.+++
T Consensus 404 yvL~~~~~~~ 413 (466)
T PLN00415 404 YELAYVEAKC 413 (466)
T ss_pred HHHHHHHhhc
Confidence 9999998664
No 36
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....
Probab=100.00 E-value=9.2e-34 Score=243.37 Aligned_cols=173 Identities=54% Similarity=0.866 Sum_probs=149.1
Q ss_pred CCcceEEeEEEEEcCCccccHHHHHHhhCCCcchheeccccEEEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEE
Q 018518 5 HPKNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEV 84 (354)
Q Consensus 5 ~~~~v~I~~ig~~lP~~~v~~e~l~~~~~~~~~~~~~gig~r~~~~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~ 84 (354)
|+.+|+|.+|+.|+|..+++.+++++..|.++++|..|+|+.++++++++|++.+||+.|++++|++.+++|++|+.|++
T Consensus 1 ~p~~VGI~~i~~y~p~~~v~~~~La~~~g~d~~K~~~glgq~~~av~~~~ED~vTmA~nAa~~ll~~~~id~~~Ig~l~v 80 (174)
T PF01154_consen 1 RPQNVGIDAIEFYIPRYYVDQEELAEARGVDPGKYTIGLGQEKMAVPPPDEDIVTMAANAAKPLLDRYNIDPDDIGRLIV 80 (174)
T ss_dssp --SSEEEEEEEEE-ESEEEEHHHHHHHTTS-TCHHHTTT--SEEEE--TTS-HHHHHHHHHHTTHHHHT-HHHHEEEEEE
T ss_pred CCccccEeEEEEecCceEecHHHHHHHhCCCHHHhhhhcCeeEEEeCCCcccHHHHHHHHHHHHHHHcCCCHHHccEEEE
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeeccccCCCCCCccc
Q 018518 85 GSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARPTG 164 (354)
Q Consensus 85 ~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~~~~~~~~~~lf 164 (354)
+|+|+.+..++++.+|++.||++++++|..||+.++|.|++.||+.|..|++++.++++++|||++|...|...+.+++.
T Consensus 81 gTES~vD~sKs~~t~v~~ll~~s~~~~~~~~e~k~ACygGTaAL~~a~~~v~s~~~~g~~aLVVasDiA~y~~g~~e~Tq 160 (174)
T PF01154_consen 81 GTESGVDKSKSISTYVHQLLGLSGNPDCRGVEMKQACYGGTAALQNAVNWVASSPWDGRKALVVASDIARYDLGSAEPTQ 160 (174)
T ss_dssp E-SS-SBSSS-HHHHHHHHTTTTT-SSSEEEEEESGGGHHHHHHHHHHHHHCSTTSTTEEEEEEEEEEE--STTTTGGG-
T ss_pred eccccccccccHHHHHHHHhCcCCCCceeeeehhhhhHHHHHHHHHHHHHHhcCCCCCCeEEEEeccccccCCCCccccc
Confidence 99999999999999999999997667899999999999999999999999999877789999999999999887778999
Q ss_pred cceeEEEEEccCC
Q 018518 165 GAAAVAMLIGPDA 177 (354)
Q Consensus 165 GDGAaA~lL~~~~ 177 (354)
|.||+|+||+++.
T Consensus 161 GAGAVAmLi~~na 173 (174)
T PF01154_consen 161 GAGAVAMLIGPNA 173 (174)
T ss_dssp EEEEEEEEEECS-
T ss_pred cceeEEEEecCCC
Confidence 9999999999863
No 37
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=99.95 E-value=2.4e-27 Score=213.51 Aligned_cols=167 Identities=22% Similarity=0.315 Sum_probs=129.7
Q ss_pred CcceEEeEEEEEcCCccccHHHHHHhh----CCCc-----chhe-----eccccEEEeecC------C------------
Q 018518 6 PKNVGILALDIYFPPTCVLQEALEVHD----GVSK-----GKYT-----VGLGQDCMAFCS------E------------ 53 (354)
Q Consensus 6 ~~~v~I~~ig~~lP~~~v~~e~l~~~~----~~~~-----~~~~-----~gig~r~~~~~~------~------------ 53 (354)
....+|.+||+++|+++++|+++.+++ ..+. +++. +||..|+..++. +
T Consensus 12 ~g~A~Il~IgTA~P~~~~~Q~~~~e~~~~~~~~~~~~~~~~~l~ri~~~sgI~~R~~vl~~~~~~~~p~~~~~~~ps~~~ 91 (226)
T PF00195_consen 12 PGPAYILSIGTAVPPHRITQEEIAEFFFRITHSDDLPDLRRKLRRIFENSGIEKRHSVLPEEWLDEYPSFWDFADPSLAE 91 (226)
T ss_dssp SSSEEEEEEEEE-SSEEEEGCCHHHHHHHHTT-TTGHHHHHHHHHHHHHST-SEEEESS-HHHHHTSGGGHSSSSS-HHH
T ss_pred CCCeEEEEEEEeCCCceecHHHHHHHHHHHhcccchhHHHHHHHhhhhccccceeccccchhhhhcCcchhhccCccHHH
Confidence 346899999999999999999988753 2222 2222 566666654421 0
Q ss_pred -----CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecC-cChhHHHH
Q 018518 54 -----VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTN-ACYGGTAA 127 (354)
Q Consensus 54 -----~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~-~C~g~~~a 127 (354)
.+.+.+|+.+|+++||+++|++++||++||++|+|+. ..|++..+|.++||| ++++.++.|.+ ||+|++.|
T Consensus 92 R~~~~~~~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~-~~PglD~~l~~~LgL--~~~v~R~~i~~~GC~gg~~~ 168 (226)
T PF00195_consen 92 RNALYAEEAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGI-AAPGLDARLINRLGL--RPDVQRTPIFGMGCAGGAAG 168 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSS-ECS-HHHHHHHHHT----TTSEEEEEES-GGGHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCc-CCCchhHHHHhcCCC--CCCcEEEEEeccchhhHHHH
Confidence 0235789999999999999999999999999999996 579999999999999 79999999987 99999999
Q ss_pred HHHHHHHHHhCCCCCCEEEEEEeeccc--cC---CCC-----CCccccceeEEEEEccCC
Q 018518 128 LFNCVNWVESASWDGRYGLVVCTDSAV--YA---EGP-----ARPTGGAAAVAMLIGPDA 177 (354)
Q Consensus 128 L~~A~~~l~sg~~~~~~vLVV~~e~~~--~~---~~~-----~~~lfGDGAaA~lL~~~~ 177 (354)
|.+|..+.+++ |+.+||||++|.|. +. +.. ...||||||+|+||+.+|
T Consensus 169 L~~A~~~~~~~--p~a~VLvv~vElcsl~~~~~~~~~~~~lv~~aLFgDGaAA~vv~~dP 226 (226)
T PF00195_consen 169 LRRAKDIARAN--PGARVLVVCVELCSLHFQAPNDDSLDNLVANALFGDGAAAVVVGADP 226 (226)
T ss_dssp HHHHHHHHHHS--TT-EEEEEEEEEGGGTHHHCCTTSHHHHHHHHHB-EEEEEEEEESS-
T ss_pred HHHHHHHHhCC--ccceEEEEEEEeeEEEEecCCcccHHHHhHHhhhcCCceEEEEccCC
Confidence 99999999999 77999999999993 32 221 258999999999999875
No 38
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=99.94 E-value=2.1e-26 Score=212.64 Aligned_cols=210 Identities=13% Similarity=0.056 Sum_probs=163.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHHHHH
Q 018518 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVE 136 (354)
Q Consensus 57 ~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~~l~ 136 (354)
..+|+.+|++++|+++|++++|||.||++++++++..|+.+.+|+..+|+ ++..+++++++|++++.||..|..+|+
T Consensus 7 ~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~---~~~~~~~i~~~C~s~~~al~~A~~~i~ 83 (254)
T cd00327 7 ASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGI---SGGPAYSVNQACATGLTALALAVQQVQ 83 (254)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCC---CCCCcceeccHhHHHHHHHHHHHHHHH
Confidence 77999999999999999999999999999999988789999999999999 478899999999999999999999999
Q ss_pred hCCCCCCEEEEEEeeccccCCCCCCccccceeEEEEEccCCC---ce--eeecceeecccccccccccCCCCccccccCc
Q 018518 137 SASWDGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIGPDAP---IA--FESKLRGSHMSHAYDFYKPNLASEYPVVDGK 211 (354)
Q Consensus 137 sg~~~~~~vLVV~~e~~~~~~~~~~~lfGDGAaA~lL~~~~~---~~--~~~~~~~~~~~~~~~~~~p~~~~~~~~~~G~ 211 (354)
+|.+ +++||+++|. .+|||||+|+||++++. .. ......+.... ..+. ...
T Consensus 84 ~g~~--~~~lv~~~e~---------~~~gdGAaa~vL~~~~~a~~~~~~~~~~i~~~~~~-----~~~~---~~~----- 139 (254)
T cd00327 84 NGKA--DIVLAGGSEE---------FVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAAT-----FDGA---SMV----- 139 (254)
T ss_pred CCCC--CEEEEEecce---------eeecceEEEEEECcHHHHHHCCCceEEEEEEEEEc-----CCCC---CCC-----
Confidence 9966 9999999998 79999999999998642 00 00001111110 0000 000
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhhhcCCCCccCcceeeccccchHHHHHHHHHhcchhhhcccCchhhHHhhhcCCCCCC
Q 018518 212 LSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTL 291 (354)
Q Consensus 212 ~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~did~~v~Hq~n~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l 291 (354)
...+...+.++++.+++++ |++++|||+|++||++.++.+.+.+.++++.
T Consensus 140 --~~~~~~~~~~~i~~~l~~a------g~~~~did~~~~h~~~~~~~~~~~~~~~~~~---------------------- 189 (254)
T cd00327 140 --PAVSGEGLARAARKALEGA------GLTPSDIDYVEAHGTGTPIGDAVELALGLDP---------------------- 189 (254)
T ss_pred --CCCChHHHHHHHHHHHHHc------CCCHHHCCEEEccCCcCccccHHHHHHHHHH----------------------
Confidence 0123445666777777765 6999999999999999999999999988642
Q ss_pred CccccccchHHHHHHHHHHHHHHHhhcc--cccccccccCccchhHHHhHHHhhhccc
Q 018518 292 SDVESYQSRDLEKASQQVAKQLYDLKVQ--PSTLIPKQVGNMYTASLYAAFASLLHEK 347 (354)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~k~~--~s~~~~~~~GN~~saSi~~~L~~~l~~~ 347 (354)
++.. +......+|||+++||.++.|..+++..
T Consensus 190 ------------------------~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~ 223 (254)
T cd00327 190 ------------------------DGVRSPAVSATLIMTGHPLGAAGLAILDELLLML 223 (254)
T ss_pred ------------------------hCCCCCceeccccccccchHHHHHHHHHHHHHHH
Confidence 1221 1112346999999999999999987654
No 39
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=99.91 E-value=5.3e-24 Score=204.30 Aligned_cols=221 Identities=14% Similarity=0.085 Sum_probs=160.4
Q ss_pred HHHHHHHHHHHHHHHcCCC----cCCcCEEEEecccCCCC---------------------CCCHHHHHHHHhcCcCCCC
Q 018518 57 VISMSLTVVTSLLEKYKID----PTQIGRLEVGSETVIDK---------------------SKSIKTFLMQIFEKYGNTD 111 (354)
Q Consensus 57 ~~~La~~Aa~~aL~~ag~~----~~dId~li~~t~t~~~~---------------------~P~~a~~l~~~Lgl~g~~~ 111 (354)
..+|+++|+++||+++|++ +++||.||++|+++.+. .|+++..|+..||+ +
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl----~ 86 (332)
T cd00825 11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGI----H 86 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCC----C
Confidence 6789999999999999999 99999999999887764 68899999999998 3
Q ss_pred eeEEeecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeeccc----c------------------CCCCCCccccceeE
Q 018518 112 IEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV----Y------------------AEGPARPTGGAAAV 169 (354)
Q Consensus 112 ~~~~di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~~----~------------------~~~~~~~lfGDGAa 169 (354)
.++++++.+|++++.||..|..+|++|.+ +++||+++|... . .......+|||||+
T Consensus 87 g~~~~v~~~cas~~~al~~A~~~i~~g~~--~~~Lv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gdGaa 164 (332)
T cd00825 87 GPAYDVSAACAGSLHALSLAADAVQNGKQ--DIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAG 164 (332)
T ss_pred CCccccccHhHHHHHHHHHHHHHHHcCCC--CEEEEeccccccCHHHHHHHhhccccCCCCCCCCCCCCCCCEEEEeeEE
Confidence 46789999999999999999999999976 999999999861 1 11124678999999
Q ss_pred EEEEccCCCc-----eeeecceeecccccccccccCCCCccccccCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccC
Q 018518 170 AMLIGPDAPI-----AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLD 244 (354)
Q Consensus 170 A~lL~~~~~~-----~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~d 244 (354)
|+||++.+.. .+.....+.. .. ..+. ... . +......+..+++.+++++ |++++|
T Consensus 165 A~vL~~~~~a~~~~~~~~~~i~~~~-~~----~~~~-~~~--~------~~~~~~~~~~~i~~al~~a------gl~~~d 224 (332)
T cd00825 165 ALVVEELEHALARGAHIYAEIVGTA-AT----IDGA-GMG--A------FAPSAEGLARAAKEALAVA------GLTVWD 224 (332)
T ss_pred EEEECcHHHHHHCCCeEEEEEEEEE-Ec----cCCC-CCC--C------CCcCHHHHHHHHHHHHHHc------CCCHhH
Confidence 9999875420 0000001111 00 0000 000 0 0012344556677777765 699999
Q ss_pred cceeeccccchHHHHHHHHHhcchhhhcccCchhhHHhhhcCCCCCCCccccccchHHHHHHHHHHHHHHHhhccccccc
Q 018518 245 VDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLI 324 (354)
Q Consensus 245 id~~v~Hq~n~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~~s~~~ 324 (354)
||++++||.+.++.+.+.++++++... . ..+. ...+
T Consensus 225 id~~~~h~~~~~~~~~~e~~~~~~~~~---------------------~----------------------~~~~-~~~~ 260 (332)
T cd00825 225 IDYLVAHGTGTPIGDVKELKLLRSEFG---------------------D----------------------KSPA-VSAT 260 (332)
T ss_pred CCEEEccCCCCCCCCHHHHHHHHHHhC---------------------C----------------------CCce-eECC
Confidence 999999999999999998888754200 0 0011 1122
Q ss_pred ccccCccchhHHHhHHHhhhccc
Q 018518 325 PKQVGNMYTASLYAAFASLLHEK 347 (354)
Q Consensus 325 ~~~~GN~~saSi~~~L~~~l~~~ 347 (354)
..+|||+++||.++.|..++...
T Consensus 261 ~~~~G~~~aas~~~~l~~~~~~~ 283 (332)
T cd00825 261 KAMTGNLSSAAVVLAVDEAVLML 283 (332)
T ss_pred CcccccchhHhHHHHHHHHHHHH
Confidence 46999999999999999987644
No 40
>PF08540 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A synthase C terminal; InterPro: IPR013746 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the C-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1TXT_D 1TVZ_A 1X9E_B 2HDB_B 3V4X_A 3V4N_C 2P8U_A 2FA0_A 2F9A_A 2F82_A ....
Probab=99.88 E-value=5.9e-23 Score=191.26 Aligned_cols=174 Identities=58% Similarity=0.917 Sum_probs=130.1
Q ss_pred eeecceeecccccccccccCCCCccccccCcchHHHHHHHHHHHHHHHHHHHHhhh---cCCCCccCcceeeccccchHH
Q 018518 181 FESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLE---GRQFSMLDVDYFVFHSPYNKL 257 (354)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~---~~g~~~~did~~v~Hq~n~~i 257 (354)
++....++++.+++|||+|+..+++|.+||+++..+|++++..+++.+.++..... ..+...+++|+++||.|..+|
T Consensus 3 ~d~~~~~~~m~~~yDFyKP~~~seyP~VDG~~S~~~Yl~ald~~y~~y~~k~~~~~~~~~~~~~l~~~d~~~fH~Py~kl 82 (282)
T PF08540_consen 3 FDRGLRGSHMEHVYDFYKPDLSSEYPVVDGKLSIQCYLDALDKCYKRYKEKVEKLANRGNKGTSLDDFDYVCFHSPYCKL 82 (282)
T ss_dssp EETTEEEEEE----SEE-BTTT-SS-EE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSST--GGG-SEEEE--SSHHH
T ss_pred ccCCCceeehhhchhccCCCCCCCCcEEchHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCccccceEEEecCchHH
Confidence 44456789999999999999888999999999999999999999999999874322 246889999999999999999
Q ss_pred HHHHHHHhcchhhhcccCchh-hHHhhhcCCCCCCCccccccchHHHHHHHHHHHHHHHhhcccccccccccCccchhHH
Q 018518 258 VQKSFARLFFNDFLRNASSVD-EIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASL 336 (354)
Q Consensus 258 ~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~~s~~~~~~~GN~~saSi 336 (354)
+++...+|.+.|+.+.++... +...+.+.++.+++.++.+.|++++|++.+.+++.|.+|+.|++.+.+++|||||||+
T Consensus 83 v~Ka~~rl~~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~s~~dr~lek~~~~~s~~~~~~kv~psl~~~~~vGN~YTaSl 162 (282)
T PF08540_consen 83 VQKAFARLLYNDFLRNPSSEEFEEIDAELAPFRDLPLEESYFDRDLEKAFMKASKEDFERKVEPSLLYSRQVGNMYTASL 162 (282)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHCCHGGGTT--GGGHCTHHHHHHHHHHHHHHHHHHHCHHHTHHHHHHB--GGGHH
T ss_pred HHHHHHHHHHhhhhhccccccccccchhhhhhccCCcccccccHHHHHHHHHHHHHHHHHHHhHHHHHHHHcCceehHHH
Confidence 999999999988877665421 1123333566788999999999999999999999999999999999999999999999
Q ss_pred HhHHHhhhcccCccccCC
Q 018518 337 YAAFASLLHEKHSSLVSG 354 (354)
Q Consensus 337 ~~~L~~~l~~~~~~~~~~ 354 (354)
+++|+++|.+.....+.|
T Consensus 163 y~~L~SlL~~~~~~~l~G 180 (282)
T PF08540_consen 163 YLGLASLLSSAEADDLAG 180 (282)
T ss_dssp HHHHHHHHHHHHSCHHTT
T ss_pred HHHHHHHhhccCccccCC
Confidence 999999994333343333
No 41
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=99.86 E-value=8.1e-21 Score=175.78 Aligned_cols=169 Identities=21% Similarity=0.340 Sum_probs=137.4
Q ss_pred CCCcceEEeEEEEEcCCc--cccHHHHHHhhC----CCcc------hhe--eccccEEEeecC------CC-------CC
Q 018518 4 WHPKNVGILALDIYFPPT--CVLQEALEVHDG----VSKG------KYT--VGLGQDCMAFCS------EV-------ED 56 (354)
Q Consensus 4 ~~~~~v~I~~ig~~lP~~--~v~~e~l~~~~~----~~~~------~~~--~gig~r~~~~~~------~~-------e~ 56 (354)
.|...|+++..++|-|+. +++.+.+.+... .+++ ++. +|+|.+++ +++ ++ +.
T Consensus 4 ~R~r~VYLvDfac~kP~~~~~v~~~~~~e~~~~~~~f~~~sl~F~~kIlerSGlG~eTy-~P~~~~~~p~~~s~~~a~~E 82 (290)
T PF08392_consen 4 RRPRPVYLVDFACYKPPDELRVSREEFIEHARRCGRFDEESLDFQRKILERSGLGDETY-LPPALHEIPPDPSLAAAREE 82 (290)
T ss_pred CCCCCEEEEeeeecCCCcccccCHHHHHHHHHhcccCChhHHHHHHHHHHhcCCCcccc-CCcccccCCCcccHHHHHHH
Confidence 356689999999999985 688888877642 2332 221 78998764 221 11 12
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecC-cChhHHHHHHHHHHHH
Q 018518 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTN-ACYGGTAALFNCVNWV 135 (354)
Q Consensus 57 ~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~-~C~g~~~aL~~A~~~l 135 (354)
+..+...|++++|+++|++|+|||.||+.+++. .+.|+++++|.+++|+ ++++..|++++ ||++++.++++|++++
T Consensus 83 ae~v~f~av~~LL~ktgv~p~dIdiLVvncs~f-~ptPSLsamIvnr~~m--r~di~~~nLsGMGCsAgliai~lA~~lL 159 (290)
T PF08392_consen 83 AEMVIFGAVDDLLAKTGVKPSDIDILVVNCSLF-NPTPSLSAMIVNRYGM--RSDIKSYNLSGMGCSAGLIAIDLAKDLL 159 (290)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCC-CcCCcHHHHHHHHhCC--CcCeeeecccCCcchhhHHHHHHHHHHH
Confidence 456889999999999999999999999887764 6899999999999999 78999999987 9999999999999999
Q ss_pred HhCCCCCCEEEEEEeeccc---cC--CCC---CCccccceeEEEEEccCCC
Q 018518 136 ESASWDGRYGLVVCTDSAV---YA--EGP---ARPTGGAAAVAMLIGPDAP 178 (354)
Q Consensus 136 ~sg~~~~~~vLVV~~e~~~---~~--~~~---~~~lfGDGAaA~lL~~~~~ 178 (354)
+.. |+.+||||++|.+. |. +++ +++||+||++|+||++.+.
T Consensus 160 ~~~--p~~~ALVVstE~~s~~~Y~G~~rsmlv~NcLFr~GgAAvLLSn~~~ 208 (290)
T PF08392_consen 160 QAH--PNSYALVVSTENISANWYRGNDRSMLVSNCLFRMGGAAVLLSNKPS 208 (290)
T ss_pred HhC--CCcEEEEEEEeecccccccCCcHHHhhccccccCCceeEEeecCcc
Confidence 999 67999999999983 32 222 4789999999999998763
No 42
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=99.81 E-value=1.4e-18 Score=168.56 Aligned_cols=225 Identities=14% Similarity=0.056 Sum_probs=155.7
Q ss_pred ceEEeEEEEEcCCcc------------ccHHHHHHhhCCC-cchheeccccEEEeecCCCCCHHHHHHHHHHHHHHHcC-
Q 018518 8 NVGILALDIYFPPTC------------VLQEALEVHDGVS-KGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYK- 73 (354)
Q Consensus 8 ~v~I~~ig~~lP~~~------------v~~e~l~~~~~~~-~~~~~~gig~r~~~~~~~~e~~~~La~~Aa~~aL~~ag- 73 (354)
+++|.+.|...|=-. ++|.+...+++.. ++|+....+.+.+++. ..+...+|+.+|++++|++++
T Consensus 4 ~v~I~~~g~vs~lG~~~~~~~aa~ragi~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~r~~~La~~Al~~aL~~a~~ 82 (348)
T PRK06147 4 ALAIVGSGMVTAVGLDAPSSCAAIRARLDNFQETRFIDPPGGEWLIGAPVPLPPPWR-GPERLAEMAAPAIAEALEGLPA 82 (348)
T ss_pred ceEEEecceeecCcCCHHHHHHHHHcccccccccccccCCCCCceEeecCcCCcccC-chHHHHHHHHHHHHHHHHhccc
Confidence 589999999888653 3444444444443 5777755555666664 356788999999999999999
Q ss_pred CCcCCcCEEEEecc-----cCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHHHHHhCCCCCCEEEEE
Q 018518 74 IDPTQIGRLEVGSE-----TVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVV 148 (354)
Q Consensus 74 ~~~~dId~li~~t~-----t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV 148 (354)
+++++||++|+.+. ++++..|.++..++++||+ .....+++++.+|+++++||..|..+|++|.+ +.+||+
T Consensus 83 ~~~~~i~lil~~~~~~~~~~~~~~~~~~~~~~~~~lG~--~~~~~~~~i~~~casg~~Al~~A~~~i~~G~~--~~~lvg 158 (348)
T PRK06147 83 LDASEAPLLLCVAEEERPGRPPDLEERLLRELEARLGL--RLEPGSAVIARGRVSGAVALAQARRLIAAGGC--PRVLVA 158 (348)
T ss_pred ccccCCcEEEEeCchhcCCCCcchHHHHHHHHHHHhCC--CCCCCcccccccchHHHHHHHHHHHHHHcCCC--CEEEEE
Confidence 79999999998644 3444556778899999998 34467899999999999999999999999977 999999
Q ss_pred Eeecc-cc--------------CCCCCCccccceeEEEEEccCCC-----ceeeecceeecccccccccccCCCCccccc
Q 018518 149 CTDSA-VY--------------AEGPARPTGGAAAVAMLIGPDAP-----IAFESKLRGSHMSHAYDFYKPNLASEYPVV 208 (354)
Q Consensus 149 ~~e~~-~~--------------~~~~~~~lfGDGAaA~lL~~~~~-----~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 208 (354)
++|.+ .. .++.+.++|||||+++||++.+. ..+.. .+ ++.+........ ..+ -
T Consensus 159 g~d~~~~~~~~~~~~~~~~l~~~~~~~G~v~GEGA~a~vLe~~~~A~~rga~i~a--~g-~~~~~~~~~~~~---~~p-~ 231 (348)
T PRK06147 159 GVDSLLTGPTLAHYEARDRLLTSQNSNGFIPGEAAAAVLLGRPAGGEAPGLPLLG--LG-LGREPAPVGESE---DLP-L 231 (348)
T ss_pred eeccccCHHHHHHHHHhhccCCCCCCCceeeeceEEEEEEccHhhhhcCCCceEE--EE-EeecCCCcccCC---CCC-C
Confidence 99975 21 12335689999999999997542 11111 11 111111100000 000 0
Q ss_pred cCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccCcceeeccccchHHH
Q 018518 209 DGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLV 258 (354)
Q Consensus 209 ~G~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~did~~v~Hq~n~~i~ 258 (354)
+| ..+..+++..++.+ |++++||||++.|-.+.+..
T Consensus 232 ~g--------~gl~~ai~~AL~~a------gl~~~dId~v~ah~~gt~~~ 267 (348)
T PRK06147 232 RG--------DGLTQAIRAALAEA------GCGLEDMDYRIADLNGEQYR 267 (348)
T ss_pred Ch--------HHHHHHHHHHHHHc------CCCHHHCCEEEcCCCCCccc
Confidence 11 23455666666665 69999999999998765553
No 43
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=99.78 E-value=6.7e-18 Score=158.47 Aligned_cols=222 Identities=14% Similarity=0.031 Sum_probs=147.3
Q ss_pred ceEEeEEEEEcCCccccHHHHHHhhCCCcchheeccccEEEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecc
Q 018518 8 NVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSE 87 (354)
Q Consensus 8 ~v~I~~ig~~lP~~~v~~e~l~~~~~~~~~~~~~gig~r~~~~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~ 87 (354)
.++|.+.++.+-+.- -+--+.+.++.--+. .-.|+++ .+....+|+.+|+++||+++|++++|||++|+++
T Consensus 9 ~p~i~~~~~~~g~~e-~~gpl~~~fd~~~~d--~~~g~ks-----~EkAe~eLa~eAa~~ALekAGL~~~DID~IIvGd- 79 (327)
T TIGR02845 9 PPVIVSAGTAVGPKE-GEGPLGDYFDKIYDD--LYCGEDS-----WEKAERKLMEDAVNLALKKANLKKDDVDFFLAGD- 79 (327)
T ss_pred CCEEEEEEEEecCcc-ccCCChhhCCEEEec--cccCCcC-----cchhHHHHHHHHHHHHHHHcCCCHHHCCEEEEeC-
Confidence 478999998887653 222233333321111 1234432 2456789999999999999999999999999987
Q ss_pred cCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeecc-------c----c-
Q 018518 88 TVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA-------V----Y- 155 (354)
Q Consensus 88 t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~-------~----~- 155 (354)
+++ .+..++++++.||+ + .||++++|++|++||.+|..+|++|.+ ++||||++|.. + |
T Consensus 80 l~~--Q~~~As~vA~~LGI---P---~fdV~~ACSTf~~AL~lAa~lI~SG~a--d~VLVV~Ssh~S~AErqfr~p~eyg 149 (327)
T TIGR02845 80 LLN--QIITANFVARDLGI---P---FLGLYGACSTSMETLALGAMLVDGGFA--DRVLAATSSHYATAERQFRYPTEYG 149 (327)
T ss_pred CCC--cccHHHHHHHHhCC---C---EEEEeccCHHHHHHHHHHHHHHhCCCC--CEEEEEEecccchhhhhcccccccc
Confidence 343 35678999999997 3 499999999999999999999999977 99999998765 2 2
Q ss_pred -CCCCCCccccceeEEEEEccCCC-ceeeecceeecccccccccccCCCCccccccCcchHHHHHHHHHHHHHHHHHHHH
Q 018518 156 -AEGPARPTGGAAAVAMLIGPDAP-IAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFE 233 (354)
Q Consensus 156 -~~~~~~~lfGDGAaA~lL~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~G~~~~~~~~~~~~~~~~~~l~~~~ 233 (354)
.+++++.+|||||+|+||++.+. ..+.. .+-++ +.|+-.. +-..|-. - ...-+.....++| +.
T Consensus 150 ~q~~~ta~~tgdGAGA~vl~~~~~~~~i~~---~t~gk-v~d~g~~----d~~nmga-a---mapaa~dti~~h~-~d-- 214 (327)
T TIGR02845 150 VQKPPTAQWTVTGAGAVLLASTGGGPRITS---ATIGK-VVDYGIT----DPLDMGA-A---MAPAAADTIEAHF-KD-- 214 (327)
T ss_pred cCCCCeeeEEEcccEEEEEeecCCCCceEE---EEEEE-EEecCCC----Ccccchh-h---hhHHHHHHHHHHH-HH--
Confidence 24557899999999999998753 33332 12222 1111110 0011211 1 1222223333333 22
Q ss_pred hhhcCCCCccCcceeec---cccchHHHHHHHHHhcc
Q 018518 234 KLEGRQFSMLDVDYFVF---HSPYNKLVQKSFARLFF 267 (354)
Q Consensus 234 ~~~~~g~~~~did~~v~---Hq~n~~i~~~~~~~l~~ 267 (354)
.|.+++|.|.++. -..+.+|+..+.++=|+
T Consensus 215 ----~~~~~~~yd~i~tgdlg~vg~~i~~~ll~~~g~ 247 (327)
T TIGR02845 215 ----TGRSVDDYDLIVTGDLARVGSEILRKLLKERGY 247 (327)
T ss_pred ----cCCChhhccEEEecchHHHHHHHHHHHHHHcCC
Confidence 3699999999995 45567777777776665
No 44
>PRK08304 stage V sporulation protein AD; Validated
Probab=99.69 E-value=1.1e-15 Score=144.01 Aligned_cols=222 Identities=13% Similarity=0.017 Sum_probs=147.3
Q ss_pred ceEEeEEEEEcCCccccHHHHHHhhCCCcchheeccccEEEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecc
Q 018518 8 NVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSE 87 (354)
Q Consensus 8 ~v~I~~ig~~lP~~~v~~e~l~~~~~~~~~~~~~gig~r~~~~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~ 87 (354)
.++|.+.++.+-+.- .+--+.+.++.--+. .-+|.+. .++...+|+.+|+++||+++|++++|||++|+++.
T Consensus 15 ~p~i~~~~~~~g~~E-~~gpl~~~fd~~~~d--~~~Ge~s-----wEkAeseLa~eAa~~ALekAGI~~~DID~lI~Gdl 86 (337)
T PRK08304 15 PPYIISTGTIVGPKE-GEGPLGKYFDKILDD--DYCGEKS-----WEKAERKMMEDAIQQALQKANLKKSDIDYLLAGDL 86 (337)
T ss_pred CCEEEEEEEEecCcc-cCCCChhhCCeEecc--cccCCcC-----ccccHHHHHHHHHHHHHHHcCCCHHHCCEEEEECC
Confidence 478899988886652 222233333321111 1123322 24567899999999999999999999999999975
Q ss_pred cCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeecc-------ccC----
Q 018518 88 TVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA-------VYA---- 156 (354)
Q Consensus 88 t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~-------~~~---- 156 (354)
.. .+..++++++.||+ ++|++.++|+++++||.+|..+|++|.+ ++||||+++.. +|.
T Consensus 87 -l~--Q~~sAs~vA~~LGI------Pa~dV~gACST~~~AL~lAa~lI~SG~a--d~VLVV~Ssh~s~aerqfr~P~eyg 155 (337)
T PRK08304 87 -LN--QIISANFAARELGI------PFLGLYGACSTMMESLALGSMLIDGGFA--DRVLAATSSHFATAERQFRFPTEYG 155 (337)
T ss_pred -CC--CcchHHHHHHHhCC------cEEEEeccCHHHHHHHHHHHHHHhcCCC--CEEEEEEcchhhhhhhhccCchhcc
Confidence 22 35788999999986 4899999999999999999999999976 99999999986 222
Q ss_pred --CCCCCccccceeEEEEEccCCC-ceeeecceeecccccccccccCCCCccccccCcchHHHHHHHHHHHHHHHHHHHH
Q 018518 157 --EGPARPTGGAAAVAMLIGPDAP-IAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFE 233 (354)
Q Consensus 157 --~~~~~~lfGDGAaA~lL~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~G~~~~~~~~~~~~~~~~~~l~~~~ 233 (354)
..++...++|||+|+||++.+. ..+.. .+-++ +.|+-.. +-..| |.- ...-+.....++| +.
T Consensus 156 ~qrp~taqwtvtGAGA~i~~~~~~~~~i~~---~t~Gk-v~D~g~~----d~~nm-gaa---MapAa~dti~~h~-~d-- 220 (337)
T PRK08304 156 GQRPPTAQWTVTGAGAVLLSREGSGPRITH---ATIGK-VVDLGIK----DPNDM-GAA---MAPAAADTIQQHF-KD-- 220 (337)
T ss_pred ccCCCcceEEeeccEEEEEecCCCCceEEE---EeEEE-EEecCCC----Ccccc-hhh---hhHHHHHHHHHHH-HH--
Confidence 1235678999999999998753 33332 12222 1121111 00112 111 1122223233332 22
Q ss_pred hhhcCCCCccCcceeec---cccchHHHHHHHHHhcc
Q 018518 234 KLEGRQFSMLDVDYFVF---HSPYNKLVQKSFARLFF 267 (354)
Q Consensus 234 ~~~~~g~~~~did~~v~---Hq~n~~i~~~~~~~l~~ 267 (354)
.|.+++|.|.++. -.-+..|+..+.++-|+
T Consensus 221 ----~~~~~~~yDli~tGDlg~vG~~i~~~ll~~~g~ 253 (337)
T PRK08304 221 ----TGRSPEDYDLIVTGDLGRVGREILKELLKEEGY 253 (337)
T ss_pred ----cCCChhhccEEEEcchHHHHHHHHHHHHHHhCC
Confidence 3699999999995 45667788887777776
No 45
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=99.62 E-value=4.7e-14 Score=139.24 Aligned_cols=225 Identities=14% Similarity=0.112 Sum_probs=140.5
Q ss_pred ceEEeEEEEEcCCccccHHHHHHhh--CCC------cch---heeccccE--E----EeecC----CCCCHHHHHHHHHH
Q 018518 8 NVGILALDIYFPPTCVLQEALEVHD--GVS------KGK---YTVGLGQD--C----MAFCS----EVEDVISMSLTVVT 66 (354)
Q Consensus 8 ~v~I~~ig~~lP~~~v~~e~l~~~~--~~~------~~~---~~~gig~r--~----~~~~~----~~e~~~~La~~Aa~ 66 (354)
+|.|+|+|..+|.-. +.+++.+.+ |.+ ..+ +...++-. . +.+.. .-.....|+.+|++
T Consensus 2 ~i~I~G~g~~~p~g~-~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~aa~ 80 (406)
T cd00834 2 RVVITGLGAVTPLGN-GVEEFWEALLAGRSGIRPITRFDASGFPSRIAGEVPDFDPEDYLDRKELRRMDRFAQFALAAAE 80 (406)
T ss_pred cEEEECcceeCCCcC-CHHHHHHHHHcCCCeeEECCcccccCCCccEEEEcCCCChhhcCCHHHhccCCHHHHHHHHHHH
Confidence 689999999999874 556555542 221 000 00000000 0 00110 01235689999999
Q ss_pred HHHHHcCCCcCCcCE----EEEecccCC--------------------------CCCCCHHHHHHHHhcCcCCCCeeEEe
Q 018518 67 SLLEKYKIDPTQIGR----LEVGSETVI--------------------------DKSKSIKTFLMQIFEKYGNTDIEGVD 116 (354)
Q Consensus 67 ~aL~~ag~~~~dId~----li~~t~t~~--------------------------~~~P~~a~~l~~~Lgl~g~~~~~~~d 116 (354)
+||+++|+++++||. +++++..+. ...+..+.+|+..||+ + .+++.
T Consensus 81 ~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl---~-g~~~~ 156 (406)
T cd00834 81 EALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLGL---R-GPNYT 156 (406)
T ss_pred HHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhCC---C-Ccccc
Confidence 999999999877664 566655432 1225578899999998 2 35688
Q ss_pred ecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeeccc---------------------------cCCCCCCccccceeE
Q 018518 117 STNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV---------------------------YAEGPARPTGGAAAV 169 (354)
Q Consensus 117 i~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~~---------------------------~~~~~~~~lfGDGAa 169 (354)
++.+|+++++||..|..+|++|.+ +++||+++|... +..+...+++||||+
T Consensus 157 v~~acas~~~Al~~A~~~i~~G~~--d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~~p~~~~~pf~~~~~g~~~geGA~ 234 (406)
T cd00834 157 VSTACASGAHAIGDAARLIRLGRA--DVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKDRDGFVLGEGAG 234 (406)
T ss_pred cchHHHHHHHHHHHHHHHHHcCCC--CEEEEcCcccccCHHHHHHHHhcCCcCCCCCCCccCCCCCCCCCCCEeeeccEE
Confidence 899999999999999999999977 999999998752 001123578999999
Q ss_pred EEEEccCCC-----ceeeec--ceeecccccccccccCCCCccccccCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCc
Q 018518 170 AMLIGPDAP-----IAFESK--LRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSM 242 (354)
Q Consensus 170 A~lL~~~~~-----~~~~~~--~~~~~~~~~~~~~~p~~~~~~~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~ 242 (354)
|+||++.+. ..+... ..+.... ......| ..++ .....+++..++++ |+++
T Consensus 235 a~vL~~~~~A~~~g~~~~a~i~g~~~~~d-~~~~~~~-------~~~~--------~~~~~~i~~al~~a------gi~~ 292 (406)
T cd00834 235 VLVLESLEHAKARGAKIYAEILGYGASSD-AYHITAP-------DPDG--------EGAARAMRAALADA------GLSP 292 (406)
T ss_pred EEEEecHHHHHHCCCeEEEEEEEEEeccc-CCCCCCC-------CCCc--------HHHHHHHHHHHHHc------CCCH
Confidence 999987532 011100 1111111 0000111 1111 22344556666655 6999
Q ss_pred cCcceeeccccchHHHHHH
Q 018518 243 LDVDYFVFHSPYNKLVQKS 261 (354)
Q Consensus 243 ~did~~v~Hq~n~~i~~~~ 261 (354)
+|||++.+|..+....+.+
T Consensus 293 ~dId~v~~h~tgt~~~d~~ 311 (406)
T cd00834 293 EDIDYINAHGTSTPLNDAA 311 (406)
T ss_pred HHCCEEecccccCccccHH
Confidence 9999999998877665544
No 46
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=99.53 E-value=4.3e-13 Score=131.35 Aligned_cols=95 Identities=14% Similarity=0.110 Sum_probs=86.9
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHH
Q 018518 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVN 133 (354)
Q Consensus 54 ~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~ 133 (354)
+.+..+|+.+|+++||+++|+++++||.++++++.+....|..+..++..+|+ +.+++++++.+|++++.++..|..
T Consensus 13 ~~~~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl---~~~~~~~v~~~c~sg~~al~~Aa~ 89 (375)
T cd00829 13 DRSPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGL---LGKPATRVEAAGASGSAAVRAAAA 89 (375)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCC---CCcceeeEeCccHHHHHHHHHHHH
Confidence 57889999999999999999999999999998887665457888999999999 478899999999999999999999
Q ss_pred HHHhCCCCCCEEEEEEeecc
Q 018518 134 WVESASWDGRYGLVVCTDSA 153 (354)
Q Consensus 134 ~l~sg~~~~~~vLVV~~e~~ 153 (354)
+|++|.+ +.|||+++|.+
T Consensus 90 ~I~sG~~--~~vlv~g~e~~ 107 (375)
T cd00829 90 AIASGLA--DVVLVVGAEKM 107 (375)
T ss_pred HHHhCCC--CEEEEEEEeec
Confidence 9999976 99999999965
No 47
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=99.51 E-value=4.3e-13 Score=132.08 Aligned_cols=96 Identities=19% Similarity=0.114 Sum_probs=85.5
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCC--CCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHH
Q 018518 53 EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDK--SKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFN 130 (354)
Q Consensus 53 ~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~--~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~ 130 (354)
.+.+..+|+.+|++++|+++|+++++||.+|+++++++.. .|.++..++..||+ +..++++++.+|+++..+|..
T Consensus 18 ~~~~~~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl---~~~~~~~v~~aCasg~~ai~~ 94 (389)
T PRK06064 18 WDVSLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGL---APIPATRVEAACASGGAALRQ 94 (389)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCC---CCCCeeEEeCCcHHHHHHHHH
Confidence 3567899999999999999999999999999988776553 47788899999999 467889999999999999999
Q ss_pred HHHHHHhCCCCCCEEEEEEeecc
Q 018518 131 CVNWVESASWDGRYGLVVCTDSA 153 (354)
Q Consensus 131 A~~~l~sg~~~~~~vLVV~~e~~ 153 (354)
|..+|++|.+ +++||+++|..
T Consensus 95 A~~~I~sG~~--~~vLv~G~e~~ 115 (389)
T PRK06064 95 AYLAVASGEA--DVVLAAGVEKM 115 (389)
T ss_pred HHHHHHCCCC--CEEEEEEEEec
Confidence 9999999977 99999999853
No 48
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=99.50 E-value=3.1e-13 Score=134.35 Aligned_cols=113 Identities=17% Similarity=0.137 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcC----EEEEecccCCCC-------------------CCCHHHHHHHHhcCcCCCCeeE
Q 018518 58 ISMSLTVVTSLLEKYKIDPTQIG----RLEVGSETVIDK-------------------SKSIKTFLMQIFEKYGNTDIEG 114 (354)
Q Consensus 58 ~~La~~Aa~~aL~~ag~~~~dId----~li~~t~t~~~~-------------------~P~~a~~l~~~Lgl~g~~~~~~ 114 (354)
..|+.+|+++||+++|+++++|| .|++++.++++. .+..+..++..+|+ .. ++
T Consensus 88 ~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl---~g-~~ 163 (424)
T smart00825 88 QRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDL---RG-PS 163 (424)
T ss_pred HHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCC---CC-Cc
Confidence 45999999999999999999999 888888765542 34577889999998 32 57
Q ss_pred EeecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeecc-c-----------c----------CCCCCCccccceeEEEE
Q 018518 115 VDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA-V-----------Y----------AEGPARPTGGAAAVAML 172 (354)
Q Consensus 115 ~di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~-~-----------~----------~~~~~~~lfGDGAaA~l 172 (354)
+.+..+|++++.||..|..+|++|.+ +.+||+++|.. . + ..+....++||||+|+|
T Consensus 164 ~~v~~acasg~~Al~~A~~~I~~G~~--d~vlvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~~g~~~geGAaalV 241 (424)
T smart00825 164 VTVDTACSSSLVALHLACQSLRSGEC--DMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDADADGYVRGEGVGVVV 241 (424)
T ss_pred cccccHhHHHHHHHHHHHHHHHcCCC--CeeEEeeeeecCCHHHHHHHhhcCCCCCCCCCCCCCCCCCcccccceEEEEE
Confidence 89999999999999999999999977 99999999963 1 0 00123578999999999
Q ss_pred EccC
Q 018518 173 IGPD 176 (354)
Q Consensus 173 L~~~ 176 (354)
|++.
T Consensus 242 Le~~ 245 (424)
T smart00825 242 LKRL 245 (424)
T ss_pred EccH
Confidence 9874
No 49
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways. The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....
Probab=99.49 E-value=3e-14 Score=108.86 Aligned_cols=61 Identities=25% Similarity=0.225 Sum_probs=50.8
Q ss_pred EeecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeeccc-c---CCCCCCccccceeEEEEEccCC
Q 018518 115 VDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV-Y---AEGPARPTGGAAAVAMLIGPDA 177 (354)
Q Consensus 115 ~di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~~-~---~~~~~~~lfGDGAaA~lL~~~~ 177 (354)
||++++|+|+++||++|..+|++|.+ ++||||++|+.. + .++.+..+|||||+|+||++++
T Consensus 1 fDi~~~C~g~~~al~~A~~~i~~g~~--~~~Lvv~~d~~s~~~~~~~~~~~~~~gDgAaA~vl~~~~ 65 (80)
T PF08545_consen 1 FDINQACAGFLYALDVAAALIASGRA--KNALVVGGDRLSRIVDRTDRQTAFIFGDGAAAVVLSRDE 65 (80)
T ss_dssp EEEE-GGGHHHHHHHHHHHHHHTTS---SEEEEEEEEEGGGGSHTTHHHHHTTB-EEEEEEEEEEES
T ss_pred CcccccchHHHHHHHHHHHHHhhccC--CEEEEEeeccccccccccccCcceeecchheEEEEEecC
Confidence 79999999999999999999999966 999999999983 2 2234568999999999999964
No 50
>PRK06158 thiolase; Provisional
Probab=99.47 E-value=1.9e-12 Score=127.30 Aligned_cols=101 Identities=10% Similarity=-0.034 Sum_probs=83.3
Q ss_pred heeccccEEEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeec
Q 018518 39 YTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST 118 (354)
Q Consensus 39 ~~~gig~r~~~~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~ 118 (354)
...|+|...+.. .++++..+|+.+|+++||+++|++++|||.|++++.. +..|+ ..+++.||+ +..+++++.
T Consensus 11 aIvG~g~t~~~~-~~~~t~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~~--~~~~~--~~la~~lGl---~~~~~~~~~ 82 (384)
T PRK06158 11 AIVGAATAGLGE-APGLSAMELLAQAAHRALADAGLTMADVDGLFTASPD--DALWG--LSVAEYLGI---RPRFVDGTM 82 (384)
T ss_pred EEEEeeecccee-CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCC--CCCcH--HHHHHHcCC---CCeeecccc
Confidence 335777655432 2467889999999999999999999999999998743 33443 579999999 557788999
Q ss_pred CcChhHHHHHHHHHHHHHhCCCCCCEEEEEE
Q 018518 119 NACYGGTAALFNCVNWVESASWDGRYGLVVC 149 (354)
Q Consensus 119 ~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~ 149 (354)
.+|+++..+|..|..+|++|.+ ++|||+.
T Consensus 83 ~g~~s~~~al~~A~~~I~sG~~--d~vLV~~ 111 (384)
T PRK06158 83 IGGSSFLAHLLPAALALEAGLC--DVALICY 111 (384)
T ss_pred CccHHHHHHHHHHHHHHHcCCC--CEEEEee
Confidence 9999999999999999999977 9999983
No 51
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.46 E-value=2.2e-13 Score=134.03 Aligned_cols=96 Identities=11% Similarity=0.135 Sum_probs=88.0
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHH
Q 018518 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVN 133 (354)
Q Consensus 54 ~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~ 133 (354)
+++..+|+.+|+++||+++|++++|||.||++|.++++..|.++..++..||+ +.++++++++++|++++++|.+|..
T Consensus 19 ~~~~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl--~~~~~~~~v~~~c~s~~~al~~A~~ 96 (386)
T cd00751 19 DVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGL--PESVPATTVNRVCGSGLQAVALAAQ 96 (386)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCC--CCCCchhhhccccHHHHHHHHHHHH
Confidence 57899999999999999999999999999999887776678888889999999 3358899999999999999999999
Q ss_pred HHHhCCCCCCEEEEEEeecc
Q 018518 134 WVESASWDGRYGLVVCTDSA 153 (354)
Q Consensus 134 ~l~sg~~~~~~vLVV~~e~~ 153 (354)
+|++|.+ ++|||+++|.+
T Consensus 97 ~I~sG~~--~~vLv~g~e~~ 114 (386)
T cd00751 97 SIAAGEA--DVVVAGGVESM 114 (386)
T ss_pred HHHCCCC--CeEEEeeeecc
Confidence 9999977 99999999986
No 52
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=99.43 E-value=6.3e-13 Score=130.75 Aligned_cols=96 Identities=14% Similarity=0.172 Sum_probs=87.6
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHH
Q 018518 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVN 133 (354)
Q Consensus 54 ~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~ 133 (354)
+++..+|+.+|+++||+++|++++|||.+|+++.+++...|..+..++..+|+ +.++++|+++++|++++++|..|..
T Consensus 18 ~~t~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl--~~~~~~~~v~~~Casg~~al~~A~~ 95 (386)
T TIGR01930 18 DVSAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGL--PESVPAYTVNRQCASGLQAVILAAQ 95 (386)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCC--CCCceeeeecchhhHHHHHHHHHHH
Confidence 57889999999999999999999999999999887766567788899999999 3358899999999999999999999
Q ss_pred HHHhCCCCCCEEEEEEeecc
Q 018518 134 WVESASWDGRYGLVVCTDSA 153 (354)
Q Consensus 134 ~l~sg~~~~~~vLVV~~e~~ 153 (354)
+|++|.+ ++|||+++|.+
T Consensus 96 ~I~sG~~--~~vLv~g~e~~ 113 (386)
T TIGR01930 96 LIRAGEA--DVVVAGGVESM 113 (386)
T ss_pred HHHCCCC--CEEEEEEehhh
Confidence 9999977 99999999985
No 53
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.42 E-value=9.6e-12 Score=123.90 Aligned_cols=227 Identities=14% Similarity=0.058 Sum_probs=137.6
Q ss_pred cceEEeEEEEEcCCccccHHHHHHhh--CCC----cch-----heeccccEEEeecCC-----CCCHHHHHHHHHHHHHH
Q 018518 7 KNVGILALDIYFPPTCVLQEALEVHD--GVS----KGK-----YTVGLGQDCMAFCSE-----VEDVISMSLTVVTSLLE 70 (354)
Q Consensus 7 ~~v~I~~ig~~lP~~~v~~e~l~~~~--~~~----~~~-----~~~gig~r~~~~~~~-----~e~~~~La~~Aa~~aL~ 70 (354)
++|.|+|+|...|--. +.+++.+.+ |.+ .+. +...++-. ..+.++ ......|+..|+++||+
T Consensus 11 ~~VvITG~G~vs~~G~-~~~~~~~~L~~G~s~i~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~aa~~Al~ 88 (425)
T PRK06501 11 PIVAVTGMGVVTSLGQ-GKADNWAALTAGESGIHTITRFPTEGLRTRIAGT-VDFLPESPFGASALSEALARLAAEEALA 88 (425)
T ss_pred cCEEEEeeeEECCCCC-CHHHHHHHHHcCCCceEcCCcccccCCCCceEEE-EeecccccccccCHHHHHHHHHHHHHHH
Confidence 5699999999999764 666666543 221 111 11111110 001111 11235688999999999
Q ss_pred HcCCCcCCcC------------------EEEEecc---------------cCCC-------CCCCHHHHHHHHhcCcCCC
Q 018518 71 KYKIDPTQIG------------------RLEVGSE---------------TVID-------KSKSIKTFLMQIFEKYGNT 110 (354)
Q Consensus 71 ~ag~~~~dId------------------~li~~t~---------------t~~~-------~~P~~a~~l~~~Lgl~g~~ 110 (354)
++|+++.+++ .++.++. ++++ ..|+++..|+..+|+ +
T Consensus 89 dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl---~ 165 (425)
T PRK06501 89 QAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERFQFGSIADRLADRFGT---R 165 (425)
T ss_pred HcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhhcccHHHHHHHHHhCC---C
Confidence 9999654422 1122221 1221 346788999999998 2
Q ss_pred CeeEEeecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeecc---------------c-cC-----------CCCCCcc
Q 018518 111 DIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA---------------V-YA-----------EGPARPT 163 (354)
Q Consensus 111 ~~~~~di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~---------------~-~~-----------~~~~~~l 163 (354)
-++++++.+|+++++||..|.++|++|.+ +.+||+++|.. . .. .+...++
T Consensus 166 -G~~~~i~~aCaS~~~Al~~A~~~I~~G~~--d~vlvgG~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~r~G~v 242 (425)
T PRK06501 166 -GLPISLSTACASGATAIQLGVEAIRRGET--DRALCIATDGSVSAEALIRFSLLSALSTQNDPPEKASKPFSKDRDGFV 242 (425)
T ss_pred -CCceeecCccHHHHHHHHHHHHHHHcCCC--CEEEEeeecccCCHHHHHHHHHhhccccCCCCCCcccCCCCCCCCCee
Confidence 34699999999999999999999999977 99999999941 1 00 1113488
Q ss_pred ccceeEEEEEccCCC-----ceeeecceeecccccccccccCCCCccccccCcchHHHHHHHHHHHHHHHHHHHHhhhcC
Q 018518 164 GGAAAVAMLIGPDAP-----IAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGR 238 (354)
Q Consensus 164 fGDGAaA~lL~~~~~-----~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 238 (354)
+||||+|+||++.+. ..+.....+.... ....... .+..++ ..+..++++.++.+
T Consensus 243 ~GEGaaalVLe~~~~A~~rg~~i~a~i~g~~~~-~d~~~~~-----~~~~~~--------~~~~~ai~~AL~~a------ 302 (425)
T PRK06501 243 MAEGAGALVLESLESAVARGAKILGIVAGCGEK-ADSFHRT-----RSSPDG--------SPAIGAIRAALADA------ 302 (425)
T ss_pred eeccEEEEEECcHHHHHHCCCeEEEEEEEEEEc-cCCCCCC-----CCCCCH--------HHHHHHHHHHHHHc------
Confidence 999999999997532 1121111122111 0111110 011111 12445566666665
Q ss_pred CCCccCcceeeccccchHHHHHH
Q 018518 239 QFSMLDVDYFVFHSPYNKLVQKS 261 (354)
Q Consensus 239 g~~~~did~~v~Hq~n~~i~~~~ 261 (354)
|++++||||+.+|-.+....+.+
T Consensus 303 gi~p~dId~i~~Hgtgt~~~d~~ 325 (425)
T PRK06501 303 GLTPEQIDYINAHGTSTPENDKM 325 (425)
T ss_pred CCCHHHcCEEEecCccCcchHHH
Confidence 69999999999998877765554
No 54
>PRK12404 stage V sporulation protein AD; Provisional
Probab=99.42 E-value=5.6e-12 Score=118.35 Aligned_cols=222 Identities=15% Similarity=0.070 Sum_probs=139.7
Q ss_pred ceEEeEEEEEcCCccccHHHHHHhhCCCcchheeccccEEEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecc
Q 018518 8 NVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSE 87 (354)
Q Consensus 8 ~v~I~~ig~~lP~~~v~~e~l~~~~~~~~~~~~~gig~r~~~~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~ 87 (354)
.++|.+.++.+-+.- -+--+.+.++.--+. .-.|+.+ .+....+|+.+|+++||+++|++++|||++++++.
T Consensus 13 ~p~i~~~~~v~G~~E-~~Gpl~~~FD~~~~d--~~~g~~s-----wEkAE~~L~~EA~~~AL~kAGI~~~DID~i~vGdL 84 (334)
T PRK12404 13 KPVIISTGVVGGPFE-AKGPLAEDFDLLHED--LWLGQDS-----YEKAERKLLEEACSRAIEKAKLRKEDIQFFLAGDL 84 (334)
T ss_pred CCEEEEEEEEeCCcc-cCCCChhhCCeeecc--cccCCcc-----hHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEec
Confidence 478999988886652 222233333321111 1134332 23456789999999999999999999999999988
Q ss_pred cCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeecc-------ccCC---
Q 018518 88 TVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA-------VYAE--- 157 (354)
Q Consensus 88 t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~-------~~~~--- 157 (354)
+ .+..|+ .++++.||+ + .+++.++|+++.+||.+|..+|++|.+ ++||++++-.. +|..
T Consensus 85 ~-nQ~ips--sfvar~LGI---P---~~gV~gACSTg~eAL~lAa~~VaSG~A--d~VLavtsSH~~~aErqfR~P~eyG 153 (334)
T PRK12404 85 M-NQITPT--SFAARTLGI---P---YLGLFGACSTSMEGLALAALIVNSGGA--KYVLTGASSHNAAVEKQFRYPTEYG 153 (334)
T ss_pred C-CCcCcH--HHHHHHhCC---C---ccceeecCHHHHHHHHHHHHHHHcCCC--CEEEEEeCcccchhhhhccCccccc
Confidence 7 444554 599999997 3 389999999999999999999999976 99999988664 3321
Q ss_pred --C-CCCccccceeEEEEEccCCC-ceeeecceeecccccccccccCCCCccccccCcchHHHHHHHHHHHHHHHHHHHH
Q 018518 158 --G-PARPTGGAAAVAMLIGPDAP-IAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFE 233 (354)
Q Consensus 158 --~-~~~~lfGDGAaA~lL~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~G~~~~~~~~~~~~~~~~~~l~~~~ 233 (354)
| ++.----=||+|+||++.+. ..+.. .+-++ +.|+-.. +-..| |.- ...-+.....++|. .
T Consensus 154 ~Qrp~taqwTvTgaga~~l~~~~~~~~i~~---~T~Gk-v~D~g~~----d~~nM-Gaa---MAPAA~dti~~h~~-d-- 218 (334)
T PRK12404 154 GQKPPTAQWTVTGAGAAILSKTGDGPRVTS---ATIGR-VVDMGLT----DPFNM-GGA---MAPAAVDTIEAHLR-D-- 218 (334)
T ss_pred CcCCCcccEEEEceEEEEEecCCCCceEEE---EEEEE-EEecCCC----Ccccc-hhh---hhHHHHHHHHHHHH-H--
Confidence 2 22211234788999987653 33332 12222 1121110 00112 111 12222333333332 2
Q ss_pred hhhcCCCCccCcceeec---cccchHHHHHHHHHhcc
Q 018518 234 KLEGRQFSMLDVDYFVF---HSPYNKLVQKSFARLFF 267 (354)
Q Consensus 234 ~~~~~g~~~~did~~v~---Hq~n~~i~~~~~~~l~~ 267 (354)
.|.+++|.|.++. -..+.+|+..+.++=|+
T Consensus 219 ----~~~~~~~yDlI~TGDLg~vG~~i~~~ll~~~g~ 251 (334)
T PRK12404 219 ----RQIDASYYDLIVTGDLGHVGREIAKDLLHKHGV 251 (334)
T ss_pred ----hCCChhhccEEEEcchHHHHHHHHHHHHHHcCC
Confidence 3699999999995 45567777777776665
No 55
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=99.40 E-value=2.3e-11 Score=120.32 Aligned_cols=180 Identities=12% Similarity=0.060 Sum_probs=116.5
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCC-cC----EEEEecccCC----------------------CCC--CCHHHHHHHHhcC
Q 018518 56 DVISMSLTVVTSLLEKYKIDPTQ-IG----RLEVGSETVI----------------------DKS--KSIKTFLMQIFEK 106 (354)
Q Consensus 56 ~~~~La~~Aa~~aL~~ag~~~~d-Id----~li~~t~t~~----------------------~~~--P~~a~~l~~~Lgl 106 (354)
....|+..|+++||+++|+++++ ++ .+++++..+. ... ...+..|...+|+
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T cd00828 71 RTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLS 150 (407)
T ss_pred HHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhCc
Confidence 35679999999999999998766 43 3445553221 111 4567788999998
Q ss_pred cCCCCeeEEeecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeeccc------------cC-------------C-CCC
Q 018518 107 YGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV------------YA-------------E-GPA 160 (354)
Q Consensus 107 ~g~~~~~~~di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~~------------~~-------------~-~~~ 160 (354)
..-+.+.+..+|+++++||..|..+|++|.+ +.+||.++|... .. + +..
T Consensus 151 ---~~Gp~~tv~~aCaS~~~Al~~A~~~I~~G~~--d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~~~~~~pfd~~~~ 225 (407)
T cd00828 151 ---SHGPIKTPVGACATALEALDLAVEAIRSGKA--DIVVVGGVEDPLEEGLSGFANMGALSTAEEEPEEMSRPFDETRD 225 (407)
T ss_pred ---CCCCCcCcccHHHHHHHHHHHHHHHHHcCCC--CEEEEccccccChHHHHHHHHcCCCCCCCCCCCcccCCCcCCCC
Confidence 2345788999999999999999999999977 999999999742 00 0 113
Q ss_pred CccccceeEEEEEccCCC-----ceeeecceeecccccccccccCCCCccccccCcchHHHHHHHHHHHHHHHHHHHHhh
Q 018518 161 RPTGGAAAVAMLIGPDAP-----IAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKL 235 (354)
Q Consensus 161 ~~lfGDGAaA~lL~~~~~-----~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~ 235 (354)
.+++||||+++||++.+. ..+.....+.... .... ....+. + ......+++..++.+
T Consensus 226 G~~~gEGAaalvLe~~~~A~~rg~~i~a~i~g~~~~-~d~~-----~~~~~~-~--------~~~~~~a~~~Al~~A--- 287 (407)
T cd00828 226 GFVEAEGAGVLVLERAELALARGAPIYGRVAGTAST-TDGA-----GRSVPA-G--------GKGIARAIRTALAKA--- 287 (407)
T ss_pred cEEeecceEEEEEeeHHHHHHCCCeEEEEEEEEEec-cCCC-----CCCCCC-C--------hHHHHHHHHHHHHHc---
Confidence 578999999999997532 1111001111110 0000 000000 1 122344556666665
Q ss_pred hcCCCCccCcceeeccccchHHHHHH
Q 018518 236 EGRQFSMLDVDYFVFHSPYNKLVQKS 261 (354)
Q Consensus 236 ~~~g~~~~did~~v~Hq~n~~i~~~~ 261 (354)
|++++|||++..|-.+....+..
T Consensus 288 ---gi~~~dId~i~~hgtgt~~~D~~ 310 (407)
T cd00828 288 ---GLSLDDLDVISAHGTSTPANDVA 310 (407)
T ss_pred ---CCCHHHcCEEecccccCccccHH
Confidence 69999999999997766555444
No 56
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=99.39 E-value=7.3e-12 Score=124.16 Aligned_cols=178 Identities=15% Similarity=0.102 Sum_probs=119.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCE----EEEecccCCC-------------------CCCCHHHHHHHHhcCcCCCCee
Q 018518 57 VISMSLTVVTSLLEKYKIDPTQIGR----LEVGSETVID-------------------KSKSIKTFLMQIFEKYGNTDIE 113 (354)
Q Consensus 57 ~~~La~~Aa~~aL~~ag~~~~dId~----li~~t~t~~~-------------------~~P~~a~~l~~~Lgl~g~~~~~ 113 (354)
...|+.+|+++||+++|+++++++. +++++.++++ ..+..+..++..+|+ . -+
T Consensus 87 ~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl---~-g~ 162 (421)
T cd00833 87 QQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDL---R-GP 162 (421)
T ss_pred HHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCC---C-CC
Confidence 4679999999999999999988875 7777765432 114467789999998 3 26
Q ss_pred EEeecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeeccc----------------------cCCCCCCccccceeEEE
Q 018518 114 GVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV----------------------YAEGPARPTGGAAAVAM 171 (354)
Q Consensus 114 ~~di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~~----------------------~~~~~~~~lfGDGAaA~ 171 (354)
++.+..+|++++.||..|..+|++|.+ +.+||+++|... +..+....++||||+|+
T Consensus 163 ~~~v~~acas~~~Al~~A~~~I~~G~~--d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~~g~~~geGAaal 240 (421)
T cd00833 163 SLTVDTACSSSLVALHLACQSLRSGEC--DLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDADADGYVRGEGVGVV 240 (421)
T ss_pred ceeeccHhHHHHHHHHHHHHHHHcCCC--CeeEEeeeeccCCHHHHHHHhhCCCCCCCCCCCCCCCCCCCeeeeceEEEE
Confidence 788999999999999999999999977 999999999741 00112357899999999
Q ss_pred EEccCCC-----ceeeecceeecccccccccccCCCCccccccCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccCcc
Q 018518 172 LIGPDAP-----IAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVD 246 (354)
Q Consensus 172 lL~~~~~-----~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~did 246 (354)
||++.+. ..+.....+. +... +.... ..... .......+++..++++ |++++|||
T Consensus 241 vL~~~~~A~~~g~~~~a~i~g~-~~~~-~~~~~------~~~~p------~~~~~~~a~~~al~~A------gi~~~did 300 (421)
T cd00833 241 VLKRLSDALRDGDRIYAVIRGS-AVNQ-DGRTK------GITAP------SGEAQAALIRRAYARA------GVDPSDID 300 (421)
T ss_pred EEeeHHHHHHCCCeEEEEEEEE-EEcC-CCCCC------CCcCC------CHHHHHHHHHHHHHHh------CCCHHHCc
Confidence 9987532 0110001111 1000 00000 00000 1223345566666665 69999999
Q ss_pred eeeccccchHHHHH
Q 018518 247 YFVFHSPYNKLVQK 260 (354)
Q Consensus 247 ~~v~Hq~n~~i~~~ 260 (354)
++.+|-.+....+.
T Consensus 301 ~i~~hgtgt~~~D~ 314 (421)
T cd00833 301 YVEAHGTGTPLGDP 314 (421)
T ss_pred EEEeeCCCCCCCCH
Confidence 99999876554433
No 57
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=99.38 E-value=2.5e-12 Score=126.82 Aligned_cols=98 Identities=12% Similarity=0.139 Sum_probs=87.6
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHH
Q 018518 53 EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCV 132 (354)
Q Consensus 53 ~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~ 132 (354)
.+++..+|+.+|+++||+++|++|+|||.||+++.++....|..+..++..+|+ +..+++++++.+|++|++++.+|.
T Consensus 22 ~~~~~~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl--~~~~p~~~V~~~Casg~~ai~~A~ 99 (393)
T PRK05656 22 ANIPAVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGL--PHSVPAMTLNKVCGSGLKALHLAA 99 (393)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCC--CCCcceEEecccchhHHHHHHHHH
Confidence 357789999999999999999999999999999887654457778889999999 334899999999999999999999
Q ss_pred HHHHhCCCCCCEEEEEEeeccc
Q 018518 133 NWVESASWDGRYGLVVCTDSAV 154 (354)
Q Consensus 133 ~~l~sg~~~~~~vLVV~~e~~~ 154 (354)
.+|++|.+ +.+||+++|+++
T Consensus 100 ~~I~sG~~--d~vLv~G~E~ms 119 (393)
T PRK05656 100 QAIRCGDA--EVIIAGGQENMS 119 (393)
T ss_pred HHHHcCCC--CEEEEEEEhhhc
Confidence 99999976 999999999873
No 58
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=99.38 E-value=2.4e-12 Score=126.65 Aligned_cols=107 Identities=16% Similarity=0.091 Sum_probs=87.9
Q ss_pred eccccEEEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCC--CCCHHHHHHHHhcCcCCCCeeEEeec
Q 018518 41 VGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDK--SKSIKTFLMQIFEKYGNTDIEGVDST 118 (354)
Q Consensus 41 ~gig~r~~~~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~--~P~~a~~l~~~Lgl~g~~~~~~~di~ 118 (354)
.|+|...++...++++..+|+.+|+++||+++|++++|||.|+++| ++++. .+..+..|++.||+ ...++++++
T Consensus 8 vG~g~t~~~~~~~~~s~~eL~~eAa~~Al~dAgl~~~dID~iv~~~-~~~~~~~~~~~~~~va~~LGl---~~~~~~~v~ 83 (386)
T PRK08313 8 LGTGQTKYVAKRQDVSMAGLVREAIDRALADAGLTWDDIDAVVVGK-APDFFEGVMMPELFLADALGA---TGKPLIRVH 83 (386)
T ss_pred EEeecCCcCccCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEec-cccccccccCchHHHHHhcCC---CCCceEEEe
Confidence 5666655422235678899999999999999999999999999987 45432 12334789999999 567789999
Q ss_pred CcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeecc
Q 018518 119 NACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA 153 (354)
Q Consensus 119 ~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~ 153 (354)
++|+++..++..|..+|++|.+ ++||||++|..
T Consensus 84 ~~casg~~al~~A~~~I~sG~~--~~vLVvg~e~~ 116 (386)
T PRK08313 84 TAGSVGGSTAVVAASLVQSGVY--RRVLAVAWEKQ 116 (386)
T ss_pred ccCHHHHHHHHHHHHHHHCCCC--CEEEEEEEEEc
Confidence 9999999999999999999977 99999999853
No 59
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=99.36 E-value=4.6e-12 Score=124.61 Aligned_cols=107 Identities=17% Similarity=0.147 Sum_probs=90.1
Q ss_pred eccccEEEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCc
Q 018518 41 VGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNA 120 (354)
Q Consensus 41 ~gig~r~~~~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~ 120 (354)
.|+|...+... ++++..+|+.+|+++||+++|++++|||.||+++.++....+..+..++..||+ ++..+++++.+
T Consensus 6 vG~g~t~~~~~-~~~~~~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl---~~~~~~~v~~~ 81 (385)
T PRK12578 6 IGVGNSKFGRR-DDVSVQELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGL---TGKVPLRVEAM 81 (385)
T ss_pred Eeecccceeec-CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCC---CCCCeeEEecc
Confidence 56776654332 467889999999999999999999999999999877643234457889999999 55667999999
Q ss_pred ChhHHHHHHHHHHHHHhCCCCCCEEEEEEeecc
Q 018518 121 CYGGTAALFNCVNWVESASWDGRYGLVVCTDSA 153 (354)
Q Consensus 121 C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~ 153 (354)
|++++.+|..|..+|++|.+ ++||||++|.+
T Consensus 82 casg~~al~~A~~~I~sG~~--~~vLvvg~e~~ 112 (385)
T PRK12578 82 CATGLAASLTAYTAVASGLV--DMAIAVGVDKM 112 (385)
T ss_pred CHHHHHHHHHHHHHHHCCCC--CEEEEEEEeec
Confidence 99999999999999999976 99999999974
No 60
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=99.35 E-value=9.1e-13 Score=102.79 Aligned_cols=67 Identities=24% Similarity=0.262 Sum_probs=52.3
Q ss_pred cCCCCccCcceeeccccchHHHHHHHHHhcchhhhcccCchhhHHhhhcCCCCCCCccccccchHHHHHHHHHHHHHHHh
Q 018518 237 GRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDL 316 (354)
Q Consensus 237 ~~g~~~~did~~v~Hq~n~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (354)
++|++++|||+|++||+|.++++.+.++++++. +
T Consensus 3 ~~g~~~~did~~i~hq~~~~~~~~~~~~lgi~~----------------------------------------------~ 36 (90)
T PF08541_consen 3 RAGLSPDDIDHFIPHQASKKILDSIAKRLGIPP----------------------------------------------E 36 (90)
T ss_dssp HTT--GGGESEEEE-SSSHHHHHHHHHHHTS-G----------------------------------------------G
T ss_pred cccCCHHHCCEEEeCCCCHHHHHHHHHHcCCcH----------------------------------------------H
Confidence 358999999999999999999999999999752 6
Q ss_pred hcccccccccccCccchhHHHhHHHhhhcccCccccCC
Q 018518 317 KVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLVSG 354 (354)
Q Consensus 317 k~~~s~~~~~~~GN~~saSi~~~L~~~l~~~~~~~~~~ 354 (354)
|+..++ ++|||++|||+|+.|.++++++ .+++|
T Consensus 37 ~~~~~~---~~~Gn~~sa~~~~~L~~~~~~g--~~~~G 69 (90)
T PF08541_consen 37 RFPDNL---AEYGNTGSASIPINLADALEEG--RIKPG 69 (90)
T ss_dssp GBE-TH---HHH-B-GGGHHHHHHHHHHHTT--SSCTT
T ss_pred HHHHHH---hccCcchhhhHHHHHHHHHHcC--CCCCC
Confidence 766654 7999999999999999999987 66554
No 61
>PRK09051 beta-ketothiolase; Provisional
Probab=99.33 E-value=6.3e-12 Score=123.86 Aligned_cols=97 Identities=13% Similarity=0.147 Sum_probs=85.1
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCC-CHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHH
Q 018518 53 EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSK-SIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNC 131 (354)
Q Consensus 53 ~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P-~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A 131 (354)
.+++..+|+.+|+++||+++|++|+|||.||++++++++..+ ..+..+...+|+ +.++++++|+++|++|++|+.+|
T Consensus 23 ~~~~~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl--~~~~p~~~V~~aCaSg~~Al~~A 100 (394)
T PRK09051 23 KDVAPTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGV--PQETPAFNVNRLCGSGLQAIVSA 100 (394)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCC--CCCCceEEecccchHHHHHHHHH
Confidence 356889999999999999999999999999999988765443 455566677798 44689999999999999999999
Q ss_pred HHHHHhCCCCCCEEEEEEeecc
Q 018518 132 VNWVESASWDGRYGLVVCTDSA 153 (354)
Q Consensus 132 ~~~l~sg~~~~~~vLVV~~e~~ 153 (354)
..+|++|.+ +.+||+++|++
T Consensus 101 ~~~I~sG~~--d~vLvvG~E~m 120 (394)
T PRK09051 101 AQAILLGDA--DVAIGGGAESM 120 (394)
T ss_pred HHHHHcCCC--CEEEEEeehhc
Confidence 999999977 99999999987
No 62
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=99.33 E-value=5.9e-12 Score=124.06 Aligned_cols=98 Identities=7% Similarity=0.032 Sum_probs=85.6
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHH
Q 018518 53 EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCV 132 (354)
Q Consensus 53 ~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~ 132 (354)
.+++..+|+.+|+++||+++|++|+|||.+|+++.++....+..+..++..+|+ +.++++++|+.+|++|++|+..|.
T Consensus 22 ~~~~~~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl--~~~~p~~~V~~~CaSg~~Al~~A~ 99 (393)
T PRK08235 22 KDVKATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGI--PWEVQTETVNKVCASGLRAVTLAD 99 (393)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCC--CCCcceeehhhhhhHHHHHHHHHH
Confidence 357889999999999999999999999999999886522234555677899999 457999999999999999999999
Q ss_pred HHHHhCCCCCCEEEEEEeeccc
Q 018518 133 NWVESASWDGRYGLVVCTDSAV 154 (354)
Q Consensus 133 ~~l~sg~~~~~~vLVV~~e~~~ 154 (354)
.+|++|.+ +.+||+++|.++
T Consensus 100 ~~I~sG~~--d~vLvvG~E~ms 119 (393)
T PRK08235 100 QIIRAGDA--SVIVAGGMESMS 119 (393)
T ss_pred HHHHCCCC--CEEEEEeeeccc
Confidence 99999977 999999999873
No 63
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=99.33 E-value=4.9e-12 Score=125.12 Aligned_cols=96 Identities=17% Similarity=0.186 Sum_probs=88.9
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHH
Q 018518 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVN 133 (354)
Q Consensus 54 ~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~ 133 (354)
+++..+|+.+|+++||+++|++++|||.||+++.++....|.++..++..+|+ +.++++++|+.+|++++.++..|..
T Consensus 23 ~~~~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl--~~~~p~~~V~~~CaSg~~Al~~A~~ 100 (404)
T PRK06205 23 DVPAEELAATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGL--PVTVPGMQLDRRCGSGLQAVITAAM 100 (404)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCC--CCCCceeehhhhhhHHHHHHHHHHH
Confidence 57889999999999999999999999999999988877778888889999999 4468899999999999999999999
Q ss_pred HHHhCCCCCCEEEEEEeecc
Q 018518 134 WVESASWDGRYGLVVCTDSA 153 (354)
Q Consensus 134 ~l~sg~~~~~~vLVV~~e~~ 153 (354)
+|++|.+ +.+||+++|.+
T Consensus 101 ~I~sG~~--d~vLv~G~E~m 118 (404)
T PRK06205 101 QVQTGAA--DVVIAGGAESM 118 (404)
T ss_pred HHHcCCC--CEEEEeeehhh
Confidence 9999977 99999999987
No 64
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=99.33 E-value=5.5e-12 Score=124.18 Aligned_cols=98 Identities=13% Similarity=0.148 Sum_probs=89.1
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCC-HHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHH
Q 018518 53 EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKS-IKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNC 131 (354)
Q Consensus 53 ~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~-~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A 131 (354)
.++++.+|+.+|++++|+++|++|++||.||+++.+++...|+ .+..+...+|+ +.++++++|+.+|+|+++|+.+|
T Consensus 23 ~~~~~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl--~~~~p~~~V~~aCaSg~~Al~~A 100 (392)
T PRK07108 23 NMTHGATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGL--PVTVPGMTVNRFCSSGLQTIALA 100 (392)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCC--CCCCceeeecchhhHHHHHHHHH
Confidence 4567899999999999999999999999999999888766555 78889999999 44699999999999999999999
Q ss_pred HHHHHhCCCCCCEEEEEEeeccc
Q 018518 132 VNWVESASWDGRYGLVVCTDSAV 154 (354)
Q Consensus 132 ~~~l~sg~~~~~~vLVV~~e~~~ 154 (354)
..+|++|.+ +.+|++++|+++
T Consensus 101 ~~~I~sG~~--d~vlagGvE~ms 121 (392)
T PRK07108 101 AQRVIAGEG--DVFVAGGVESIS 121 (392)
T ss_pred HHHHHCCCC--CEEEEEEEeccC
Confidence 999999977 999999999984
No 65
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=99.32 E-value=9.7e-12 Score=122.70 Aligned_cols=97 Identities=13% Similarity=0.094 Sum_probs=84.5
Q ss_pred CCCHHHHHHHHHHHHHHHc-CCCcCCcCEEEEecccCCCCCCCHHHHHH-HHhcCcCCCCeeEEeecCcChhHHHHHHHH
Q 018518 54 VEDVISMSLTVVTSLLEKY-KIDPTQIGRLEVGSETVIDKSKSIKTFLM-QIFEKYGNTDIEGVDSTNACYGGTAALFNC 131 (354)
Q Consensus 54 ~e~~~~La~~Aa~~aL~~a-g~~~~dId~li~~t~t~~~~~P~~a~~l~-~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A 131 (354)
+++..+|+.+|++++|+++ |++++|||.||+++++++...|...+.+. ..+|+ +..+++++|+.+|++|++|+..|
T Consensus 28 ~~s~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~Gl--~~~~p~~~V~~aCaSg~~Al~~A 105 (399)
T PRK09052 28 NTRPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGL--PNSVGGVTVNRFCASGLQAVAMA 105 (399)
T ss_pred CCCHHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcCC--CCCCceeeecchhhHHHHHHHHH
Confidence 4678999999999999997 99999999999999888766566666654 45588 33589999999999999999999
Q ss_pred HHHHHhCCCCCCEEEEEEeeccc
Q 018518 132 VNWVESASWDGRYGLVVCTDSAV 154 (354)
Q Consensus 132 ~~~l~sg~~~~~~vLVV~~e~~~ 154 (354)
..+|++|.+ +.|||+++|.++
T Consensus 106 ~~~I~sG~~--d~vLv~G~E~mS 126 (399)
T PRK09052 106 ADRIRVGEA--DVMIAAGVESMS 126 (399)
T ss_pred HHHHHCCCC--CEEEEEEEeccc
Confidence 999999977 999999999873
No 66
>PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A ....
Probab=99.30 E-value=3.7e-12 Score=108.76 Aligned_cols=78 Identities=13% Similarity=0.163 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCccCcceeeccccchHHHHHHHHHhcchhhhcccCchhhHHhhhcCCCCCCCccc
Q 018518 216 CYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVE 295 (354)
Q Consensus 216 ~~~~~~~~~~~~~l~~~~~~~~~g~~~~did~~v~Hq~n~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 295 (354)
.....+..+++.+++.. |++..|+++|++|+++++|++.+.+.|++++
T Consensus 37 ~i~~~i~~~~~~~L~~~------g~~~~~~~~wavHPGG~~ILd~v~~~L~L~~-------------------------- 84 (151)
T PF02797_consen 37 LISDNIPPFVEDLLARH------GLSDWDILFWAVHPGGRKILDAVEEALGLSP-------------------------- 84 (151)
T ss_dssp HHHHHHHHHHHHHHHGG------TCCSGGGSEEEEE-SSHHHHHHHHHHHTS-G--------------------------
T ss_pred HHHHHHHHHHHHHHhhh------cccccccceeeecCChHHHHHHHHHHcCCCH--------------------------
Confidence 34455666677777665 5776677899999999999999999999853
Q ss_pred cccchHHHHHHHHHHHHHHHhhcccccccccccCccchhHHHhHHHhhhc
Q 018518 296 SYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLH 345 (354)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~k~~~s~~~~~~~GN~~saSi~~~L~~~l~ 345 (354)
+++.+|+.++++|||||||||+++|.++++
T Consensus 85 --------------------~~l~~Sr~vLr~yGNmSSaTVlfVL~~~~~ 114 (151)
T PF02797_consen 85 --------------------EQLRASREVLREYGNMSSATVLFVLERMRR 114 (151)
T ss_dssp --------------------GGGHHHHHHHHHH-B-GGGHHHHHHHHHHH
T ss_pred --------------------HHHHHHHHHHHhcCCCCCcchHHHHHHHHh
Confidence 889999999999999999999999999987
No 67
>PRK06059 lipid-transfer protein; Provisional
Probab=99.29 E-value=1.6e-11 Score=121.31 Aligned_cols=95 Identities=15% Similarity=0.095 Sum_probs=83.3
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCC-CCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHH
Q 018518 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVID-KSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCV 132 (354)
Q Consensus 54 ~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~-~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~ 132 (354)
+++..+|+.+|+++||+++|++++|||.||+++..+.. ..|..+..+++.||+ .++++++++++|++++.+|..|.
T Consensus 20 ~~~~~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~---~~~~~~~v~~~Casg~~al~~A~ 96 (399)
T PRK06059 20 GRDFVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGW---NGAPVSSSYAACASGSQALQSAR 96 (399)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCC---CCCceecccchhHHHHHHHHHHH
Confidence 46779999999999999999999999999987765543 335567899999999 56778999999999999999999
Q ss_pred HHHHhCCCCCCEEEEEEeecc
Q 018518 133 NWVESASWDGRYGLVVCTDSA 153 (354)
Q Consensus 133 ~~l~sg~~~~~~vLVV~~e~~ 153 (354)
.+|++|.+ +++||+++|.+
T Consensus 97 ~~I~sG~~--~~vLvvg~e~~ 115 (399)
T PRK06059 97 AQILAGLC--DVALVVGADTT 115 (399)
T ss_pred HHHHCCCC--CEEEEEEEccc
Confidence 99999976 99999999864
No 68
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=99.28 E-value=2.1e-11 Score=120.15 Aligned_cols=98 Identities=13% Similarity=0.136 Sum_probs=85.5
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCC-CCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHH
Q 018518 53 EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKS-KSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNC 131 (354)
Q Consensus 53 ~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~-P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A 131 (354)
.+.++.+|+.+|++++|+++|++|++||.||+++.++.... +..+......+|+ +.++++++|+.+|+||++|+.+|
T Consensus 24 ~~~~~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl--~~~~pa~~Vn~aCaSg~~Ai~~A 101 (402)
T PRK08242 24 HEVKPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGL--PETVPGVQINRFCASGLEAVNLA 101 (402)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCC--CCCCCeEEEcchhhhHHHHHHHH
Confidence 34678899999999999999999999999999999875433 3455556677898 56799999999999999999999
Q ss_pred HHHHHhCCCCCCEEEEEEeeccc
Q 018518 132 VNWVESASWDGRYGLVVCTDSAV 154 (354)
Q Consensus 132 ~~~l~sg~~~~~~vLVV~~e~~~ 154 (354)
..+|++|.+ +.+|++++|.++
T Consensus 102 ~~~I~sG~~--d~vLv~G~E~mS 122 (402)
T PRK08242 102 AAKVRSGWD--DLVIAGGVESMS 122 (402)
T ss_pred HHHHHcCCC--CEEEEEEEEccC
Confidence 999999976 999999999983
No 69
>PRK05790 putative acyltransferase; Provisional
Probab=99.27 E-value=2.6e-11 Score=119.61 Aligned_cols=96 Identities=10% Similarity=0.114 Sum_probs=82.9
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHH
Q 018518 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVN 133 (354)
Q Consensus 54 ~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~ 133 (354)
+++..+|+.+|+++||+++|++++|||.||+++.++....+..+..++..+|+ +.++++++++.+|++++++|.+|..
T Consensus 23 ~~~~~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl--~~~~~~~~v~~~Casg~~al~~A~~ 100 (393)
T PRK05790 23 DVSAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGL--PVEVPALTINKVCGSGLKAVALAAQ 100 (393)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCC--CCCCceeeecccchHHHHHHHHHHH
Confidence 57889999999999999999999999999998876543334555557777888 3367899999999999999999999
Q ss_pred HHHhCCCCCCEEEEEEeecc
Q 018518 134 WVESASWDGRYGLVVCTDSA 153 (354)
Q Consensus 134 ~l~sg~~~~~~vLVV~~e~~ 153 (354)
+|++|.+ ++|||+++|.+
T Consensus 101 ~I~sG~~--d~vLv~G~e~~ 118 (393)
T PRK05790 101 AIRAGDA--DIVVAGGQESM 118 (393)
T ss_pred HHHcCCC--CEEEEEeeecc
Confidence 9999977 99999999975
No 70
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=99.25 E-value=3.6e-11 Score=119.77 Aligned_cols=96 Identities=10% Similarity=0.119 Sum_probs=85.8
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHH
Q 018518 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVN 133 (354)
Q Consensus 54 ~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~ 133 (354)
+.+..+|+.+|+++||+++|++++|||.||+++.++....+..+..++..+|+ +.++++++++.+|++++.++..|..
T Consensus 24 ~~~~~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl--~~~~p~~~v~~~CaSg~~al~~A~~ 101 (426)
T PRK08170 24 PFSASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGC--GEKVPAWTVQRNCASGMQALDSAAA 101 (426)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCc--CCCceeeeccchhhHHHHHHHHHHH
Confidence 35789999999999999999999999999998776543446778889999999 4468999999999999999999999
Q ss_pred HHHhCCCCCCEEEEEEeecc
Q 018518 134 WVESASWDGRYGLVVCTDSA 153 (354)
Q Consensus 134 ~l~sg~~~~~~vLVV~~e~~ 153 (354)
+|++|.+ +++||+++|.+
T Consensus 102 ~I~sG~~--d~vLv~G~E~m 119 (426)
T PRK08170 102 NIALGRA--DLVLAGGVEAM 119 (426)
T ss_pred HHHCCCC--CEEEEEEEecc
Confidence 9999977 99999999976
No 71
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=99.24 E-value=4.3e-11 Score=117.78 Aligned_cols=107 Identities=12% Similarity=0.031 Sum_probs=89.3
Q ss_pred heeccccEEEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCC--CCCHHHHHHHHhcCcCCCCeeEEe
Q 018518 39 YTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDK--SKSIKTFLMQIFEKYGNTDIEGVD 116 (354)
Q Consensus 39 ~~~gig~r~~~~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~--~P~~a~~l~~~Lgl~g~~~~~~~d 116 (354)
...|+|...+.. .++++..+|+.+|+++||+++|++++|||.+|+++. ++.. .+..+..+++.||+ .+.++++
T Consensus 12 aIvG~g~t~~~~-~~~~~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~-~~~~~~~~~~a~~l~~~lG~---~~~~~~~ 86 (392)
T PRK06065 12 AVIGAGLTLFRR-RLLETPQELAWEAASKALDEAGLELKDIDCVVIGSA-PDAFDGVHMKGEYLSHGSGG---IRKPVSR 86 (392)
T ss_pred EEEEecccCCcC-CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecc-CCcccccccHHHHHHHHcCC---CCCCeEE
Confidence 346777665433 246788999999999999999999999999999763 3322 46688889999998 4577899
Q ss_pred ecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeec
Q 018518 117 STNACYGGTAALFNCVNWVESASWDGRYGLVVCTDS 152 (354)
Q Consensus 117 i~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~ 152 (354)
+.++|+++..++..|...|++|.+ ++||||++|+
T Consensus 87 V~~~gasG~~al~~A~~~I~sG~a--d~vLVvg~e~ 120 (392)
T PRK06065 87 VYVGGATGVMTAIAGWYHVASGLC--QKVLAVAEEK 120 (392)
T ss_pred EecCchhHHHHHHHHHHHHhCCCC--CEEEEEEeec
Confidence 999999999999999999999977 9999999986
No 72
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=99.23 E-value=3e-10 Score=110.59 Aligned_cols=90 Identities=13% Similarity=0.185 Sum_probs=76.6
Q ss_pred CCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHHH
Q 018518 55 EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNW 134 (354)
Q Consensus 55 e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~~ 134 (354)
..+.+|+..|.+++++ |++ ++||.+|+++..+.. +..+..+...+|+ +..++++-++.+|++++.++..|..+
T Consensus 23 ~~~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~~--~~~~r~~~~~~Gl--~~~~p~~tV~~~CaSG~~Ai~~a~~~ 95 (361)
T PRK06690 23 YEVQQLAAPLLTFLSK--GME-REIDDVILGNVVGPG--GNVARLSALEAGL--GLHIPGVTIDRQCGAGLEAIRTACHF 95 (361)
T ss_pred CCHHHHHHHHHHHHHc--cch-hhcCEEEEEecCCCc--chHHHHHHHHcCC--CCCCCceehhhhhhHHHHHHHHHHHH
Confidence 4578999999999865 886 899999999876542 3444457888999 44799999999999999999999999
Q ss_pred HHhCCCCCCEEEEEEeecc
Q 018518 135 VESASWDGRYGLVVCTDSA 153 (354)
Q Consensus 135 l~sg~~~~~~vLVV~~e~~ 153 (354)
|++|.+ +.+|++++|.+
T Consensus 96 I~sG~~--d~~l~gG~E~m 112 (361)
T PRK06690 96 IQGGAG--KCYIAGGVEST 112 (361)
T ss_pred HHCCCC--CEEEEeccccc
Confidence 999977 99999999987
No 73
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=99.23 E-value=4.2e-10 Score=111.27 Aligned_cols=225 Identities=15% Similarity=0.107 Sum_probs=135.2
Q ss_pred ceEEeEEEEEcCCccccHHHHHHhh--CCC----cchhe-eccccEEEe-ec--CC-----------CCCHHHHHHHHHH
Q 018518 8 NVGILALDIYFPPTCVLQEALEVHD--GVS----KGKYT-VGLGQDCMA-FC--SE-----------VEDVISMSLTVVT 66 (354)
Q Consensus 8 ~v~I~~ig~~lP~~~v~~e~l~~~~--~~~----~~~~~-~gig~r~~~-~~--~~-----------~e~~~~La~~Aa~ 66 (354)
+|.|+|+|...|--. +.+++.+.+ |.+ ..++. .....+... +. ++ -.....|+.+|++
T Consensus 2 ~v~ItG~g~~~p~g~-~~~~~~~~l~~g~s~~~~~~~~~~~~~~~~~~g~i~~f~~~~~~~~~~~~~~~~~~~l~~~aa~ 80 (407)
T TIGR03150 2 RVVVTGLGAVTPLGN-GVEEFWENLLAGKSGIGPITRFDASDLPVKIAGEVKDFDPEDYIDKKEARRMDRFIQYALAAAK 80 (407)
T ss_pred cEEEEcceEECCCcC-CHHHHHHHHHcCCCeeEECCcccccCCCCcEEEEeCCcChhhcCCHHHHhhcCHHHHHHHHHHH
Confidence 689999999999874 677766543 221 01110 000000000 10 00 0123579999999
Q ss_pred HHHHHcCCCcCCcCE----EEEecccCCC-----------------C----C----C-CHHHHHHHHhcCcCCCCeeEEe
Q 018518 67 SLLEKYKIDPTQIGR----LEVGSETVID-----------------K----S----K-SIKTFLMQIFEKYGNTDIEGVD 116 (354)
Q Consensus 67 ~aL~~ag~~~~dId~----li~~t~t~~~-----------------~----~----P-~~a~~l~~~Lgl~g~~~~~~~d 116 (354)
+||+++|+++++||. +++++..+.. . . + ..+.++...+|+. -+.+-
T Consensus 81 ~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~----g~~~~ 156 (407)
T TIGR03150 81 EAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGAK----GPNHA 156 (407)
T ss_pred HHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhCCC----Ccccc
Confidence 999999999999886 6666643211 0 1 1 1445688888882 34577
Q ss_pred ecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeecc-c---------------cCC-----------CCCCccccceeE
Q 018518 117 STNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA-V---------------YAE-----------GPARPTGGAAAV 169 (354)
Q Consensus 117 i~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~-~---------------~~~-----------~~~~~lfGDGAa 169 (354)
+..+|++++.||..|..+|++|.+ +.+||+++|.. . +.+ ....+++||||+
T Consensus 157 v~~acaSg~~Al~~A~~~I~~G~~--d~~lvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~g~~~gEGAa 234 (407)
T TIGR03150 157 VVTACATGTHAIGDAFRLIQRGDA--DVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKDRDGFVMGEGAG 234 (407)
T ss_pred cccHHHHHHHHHHHHHHHHhcCCC--CEEEEecccCcCCHHHHHHHHHhCcccCCCCCCCcCCCCCcCCCCcEEEeceEE
Confidence 788999999999999999999977 99999999962 0 010 012467899999
Q ss_pred EEEEccCCC-----ceeeecceeecc-cccccccccCCCCccccccCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCcc
Q 018518 170 AMLIGPDAP-----IAFESKLRGSHM-SHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSML 243 (354)
Q Consensus 170 A~lL~~~~~-----~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~ 243 (354)
|+||++.+. ..+.....+... .+......| ...+ .....+++..++++ |++++
T Consensus 235 alvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~-------~~~~--------~~~~~ai~~Al~~A------gi~~~ 293 (407)
T TIGR03150 235 VLVLEELEHAKARGAKIYAEIVGYGMSGDAYHITAP-------APEG--------EGAARAMRAALKDA------GINPE 293 (407)
T ss_pred EEEEeeHHHHHHCCCeEEEEEEEEEECCCCCCCCCC-------CCCc--------HHHHHHHHHHHHHc------CCCHh
Confidence 999987532 111100111110 000000111 0111 11334555666655 69999
Q ss_pred CcceeeccccchHHHHH
Q 018518 244 DVDYFVFHSPYNKLVQK 260 (354)
Q Consensus 244 did~~v~Hq~n~~i~~~ 260 (354)
|||++..|-.+....+.
T Consensus 294 dId~ve~h~tgt~~~D~ 310 (407)
T TIGR03150 294 DVDYINAHGTSTPLGDK 310 (407)
T ss_pred HCCEEeCcCCCCCCCCH
Confidence 99999999877754433
No 74
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.23 E-value=4.5e-11 Score=117.85 Aligned_cols=95 Identities=11% Similarity=0.056 Sum_probs=83.9
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHH-HHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHH
Q 018518 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKT-FLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCV 132 (354)
Q Consensus 54 ~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~-~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~ 132 (354)
.+.+.+|+.+|+++||++++++|++||.||+++.++++..+..+. .+++.+|+ .++++++|+.+|++|++++.+|.
T Consensus 20 ~~~~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~---~~~p~~~V~~~Casg~~al~~A~ 96 (393)
T cd00826 20 NDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGL---QEAPAIGMNNLCGSGLRALALAM 96 (393)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCC---CCCcEEEecchhHHHHHHHHHHH
Confidence 356789999999999999999999999999999887754455555 36778887 67899999999999999999999
Q ss_pred HHHHhCCCCCCEEEEEEeecc
Q 018518 133 NWVESASWDGRYGLVVCTDSA 153 (354)
Q Consensus 133 ~~l~sg~~~~~~vLVV~~e~~ 153 (354)
.+|++|.+ +.+||+++|.+
T Consensus 97 ~~I~sG~~--~~vlv~g~e~~ 115 (393)
T cd00826 97 QLIAGGDA--NCILAGGFEKM 115 (393)
T ss_pred HHHHCCCC--CEEEEEeeecc
Confidence 99999976 99999999986
No 75
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=99.19 E-value=9.3e-11 Score=116.07 Aligned_cols=94 Identities=17% Similarity=0.163 Sum_probs=77.7
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCC-----CCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHH
Q 018518 53 EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKS-----KSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAA 127 (354)
Q Consensus 53 ~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~-----P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~a 127 (354)
++++..+|+.+|+++||+++|++++|||.+|++++++++.. |+....+ ..++ .++++++++++|++++.|
T Consensus 22 ~~~s~~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~~--~~~~---~g~~~~~v~~~Casg~~a 96 (403)
T PRK06289 22 EGRDFADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPATV--HPAL---WGVPASRHEAACASGSVA 96 (403)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHHH--hhcC---CCCceeecccccHHHHHH
Confidence 56789999999999999999999999999999988776432 2222222 2344 346789999999999999
Q ss_pred HHHHHHHHHhCCCCCCEEEEEEeecc
Q 018518 128 LFNCVNWVESASWDGRYGLVVCTDSA 153 (354)
Q Consensus 128 L~~A~~~l~sg~~~~~~vLVV~~e~~ 153 (354)
|.+|..+|++|.+ ++|||+++|++
T Consensus 97 l~~Aa~~I~sG~~--~~VLvvg~e~~ 120 (403)
T PRK06289 97 TLAAMADLRAGRY--DVALVVGVELM 120 (403)
T ss_pred HHHHHHHHHcCCC--CEEEEEEEEec
Confidence 9999999999977 99999999975
No 76
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=99.18 E-value=9.7e-11 Score=115.64 Aligned_cols=97 Identities=10% Similarity=0.062 Sum_probs=80.0
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHH
Q 018518 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVN 133 (354)
Q Consensus 54 ~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~ 133 (354)
+.+..+|+.+|++++|+++|++|++||.+|+++..++.. +.....+..|++.-+.++++++|+.+|++++.|+..|..
T Consensus 28 ~~~~~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~--~~~~~~~~~l~ag~~~~~p~~~V~~aCaSG~~Av~~A~~ 105 (397)
T PRK06954 28 SLTAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQ--GQAPARQAALGAGLPLSVGCTTVNKMCGSGMRAAMFAHD 105 (397)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCcc--chHHHHHHHHcCCCCCCccEeeccccchHHHHHHHHHHH
Confidence 567899999999999999999999999999998776543 333333334444103459999999999999999999999
Q ss_pred HHHhCCCCCCEEEEEEeeccc
Q 018518 134 WVESASWDGRYGLVVCTDSAV 154 (354)
Q Consensus 134 ~l~sg~~~~~~vLVV~~e~~~ 154 (354)
+|++|.+ +.+|++++|.++
T Consensus 106 ~I~sG~~--d~vLv~G~E~ms 124 (397)
T PRK06954 106 MLVAGSV--DVIVAGGMESMT 124 (397)
T ss_pred HHHCCCC--CEEEEEeeeccC
Confidence 9999977 999999999873
No 77
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=99.14 E-value=2.7e-10 Score=106.43 Aligned_cols=98 Identities=17% Similarity=0.133 Sum_probs=85.0
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHH
Q 018518 53 EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCV 132 (354)
Q Consensus 53 ~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~ 132 (354)
.+.+..+|+.+|++.+|++++++|++||.|++++..+....+.++..+.-..|+ +..++++.|+..|++++.|+..|.
T Consensus 22 ~~~~~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl--~~~vp~~~V~~~CaSG~~Av~~a~ 99 (264)
T PF00108_consen 22 ADVSPEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALAAGL--PESVPATTVNRACASGLQAVHLAA 99 (264)
T ss_dssp TTS-HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHHTTS---TTSEEEEEE-GGGHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhhccc--ccccceeeehhhhhHHHHHHHHhh
Confidence 356789999999999999999999999999999988766667777777778899 668999999999999999999999
Q ss_pred HHHHhCCCCCCEEEEEEeeccc
Q 018518 133 NWVESASWDGRYGLVVCTDSAV 154 (354)
Q Consensus 133 ~~l~sg~~~~~~vLVV~~e~~~ 154 (354)
..|++|.+ +.+|++++|.++
T Consensus 100 ~~I~sG~~--dvvlagGvE~mS 119 (264)
T PF00108_consen 100 MAIASGEA--DVVLAGGVESMS 119 (264)
T ss_dssp HHHHTTS---SEEEEEEEEETT
T ss_pred hhhcCCCc--cEEEEecccccc
Confidence 99999977 999999999984
No 78
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=99.13 E-value=3.6e-10 Score=111.40 Aligned_cols=107 Identities=19% Similarity=0.162 Sum_probs=83.3
Q ss_pred eccccEEEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCC--CCCHHHHHHHHhcCcCCCCeeEEeec
Q 018518 41 VGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDK--SKSIKTFLMQIFEKYGNTDIEGVDST 118 (354)
Q Consensus 41 ~gig~r~~~~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~--~P~~a~~l~~~Lgl~g~~~~~~~di~ 118 (354)
.|.+...+.. ..+++..+|+.+|+++||+++|++++|||.|++++..+... .+..+..+...+|+ ..+++++++
T Consensus 7 vg~g~tpfgr-~~~~~~~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl---~~~p~~~v~ 82 (389)
T PRK07516 7 VGWAHTPFGK-LDAETLESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPAL---RFKPATRVE 82 (389)
T ss_pred EeCCcceeee-cCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCC---CCCceeeec
Confidence 4555444332 24578899999999999999999999999999987643221 11122234445676 568899999
Q ss_pred CcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeecc
Q 018518 119 NACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA 153 (354)
Q Consensus 119 ~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~ 153 (354)
++|++++.||..|..+|++|.+ +++||+++|++
T Consensus 83 ~~CaSg~~Al~~A~~~I~sG~~--d~vLvvg~e~~ 115 (389)
T PRK07516 83 NACATGSAAVYAALDAIEAGRA--RIVLVVGAEKM 115 (389)
T ss_pred cccHHHHHHHHHHHHHHHCCCC--CEEEEEEehhh
Confidence 9999999999999999999977 99999999975
No 79
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=99.12 E-value=1.2e-09 Score=108.36 Aligned_cols=176 Identities=19% Similarity=0.148 Sum_probs=111.0
Q ss_pred HHHHHHHHHHHHHHHcCCC---cCCcCEEEEecc---------------cCCCCCC---------CHHHHHHHHhcCcCC
Q 018518 57 VISMSLTVVTSLLEKYKID---PTQIGRLEVGSE---------------TVIDKSK---------SIKTFLMQIFEKYGN 109 (354)
Q Consensus 57 ~~~La~~Aa~~aL~~ag~~---~~dId~li~~t~---------------t~~~~~P---------~~a~~l~~~Lgl~g~ 109 (354)
...|+..|+++||+++|++ +++|+.++.++. .+.+..| ..+..|+..||+.|
T Consensus 80 ~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~G- 158 (410)
T PRK07103 80 SAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIRG- 158 (410)
T ss_pred HHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCCCC-
Confidence 4579999999999999986 456766664332 1121122 14566788999832
Q ss_pred CCeeEEeecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeecc-c-----------------cC-----------CCCC
Q 018518 110 TDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA-V-----------------YA-----------EGPA 160 (354)
Q Consensus 110 ~~~~~~di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~-~-----------------~~-----------~~~~ 160 (354)
+++.+..+|++++.||..|..+|++|.+ +.+||+++|.. . +. .+..
T Consensus 159 ---~~~tv~~acas~~~Al~~A~~~I~~G~~--d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~~~d 233 (410)
T PRK07103 159 ---EGFTVGGASASGQLAVIQAARLVQSGSV--DACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQDRD 233 (410)
T ss_pred ---CcccccchhHHHHHHHHHHHHHHHcCCC--CEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCCCCC
Confidence 4677899999999999999999999977 99999988631 0 00 0113
Q ss_pred CccccceeEEEEEccCCC-----ceeeecceeeccc-ccccccccCCCCccccccCcchHHHHHHHHHHHHHHHHHHHHh
Q 018518 161 RPTGGAAAVAMLIGPDAP-----IAFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEK 234 (354)
Q Consensus 161 ~~lfGDGAaA~lL~~~~~-----~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~G~~~~~~~~~~~~~~~~~~l~~~~~ 234 (354)
.+++||||+|+||++.+. ..+.....+.... +......| . ......+++..++.+
T Consensus 234 G~v~gEGaaalvLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p-------~----------~~~~~~a~~~Al~~A-- 294 (410)
T PRK07103 234 GFIYGEACGAVVLESAESARRRGARPYAKLLGWSMRLDANRGPDP-------S----------LEGEMRVIRAALRRA-- 294 (410)
T ss_pred CeeEeeeEEEEEEccHHHHHHCCCceEEEEEEEEEecCCCCCCCC-------C----------HHHHHHHHHHHHHHc--
Confidence 478999999999987431 0111001111110 00000111 0 111234455555554
Q ss_pred hhcCCCCccCcceeeccccchHHHHHH
Q 018518 235 LEGRQFSMLDVDYFVFHSPYNKLVQKS 261 (354)
Q Consensus 235 ~~~~g~~~~did~~v~Hq~n~~i~~~~ 261 (354)
|++++|||++..|-.+....+.+
T Consensus 295 ----gi~~~dId~v~~hgtgt~~~D~~ 317 (410)
T PRK07103 295 ----GLGPEDIDYVNPHGTGSPLGDET 317 (410)
T ss_pred ----CCCHHHCCEEEccCCCCCCCCHH
Confidence 69999999999998777654443
No 80
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=99.11 E-value=3.9e-10 Score=111.10 Aligned_cols=97 Identities=9% Similarity=0.027 Sum_probs=85.2
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCC-CCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHH
Q 018518 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDK-SKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCV 132 (354)
Q Consensus 54 ~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~-~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~ 132 (354)
+.+..+|+.+|++++|+++|+.+++||.+|+++.+++.. .+.++.+++..+|+ +..++++.|+.+|++|+.|+..|.
T Consensus 24 ~~~~~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl--~~~~p~~~V~~aCaSG~~Al~~A~ 101 (391)
T PRK07661 24 TVRPDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGL--PYTVPAITINRYCSSGLQSIAYGA 101 (391)
T ss_pred CCCHHHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCC--CCCcceeehhhhhhHHHHHHHHHH
Confidence 346789999999999999998889999999998776543 36777789999999 335999999999999999999999
Q ss_pred HHHHhCCCCCCEEEEEEeeccc
Q 018518 133 NWVESASWDGRYGLVVCTDSAV 154 (354)
Q Consensus 133 ~~l~sg~~~~~~vLVV~~e~~~ 154 (354)
..|++|.+ +.+||+++|.++
T Consensus 102 ~~I~sG~~--d~vLv~G~E~ms 121 (391)
T PRK07661 102 ERIMLGHS--EAVIAGGAESMS 121 (391)
T ss_pred HHHHcCCC--CEEEEEEEeecc
Confidence 99999977 999999999873
No 81
>PLN02287 3-ketoacyl-CoA thiolase
Probab=99.11 E-value=4.4e-10 Score=112.44 Aligned_cols=97 Identities=12% Similarity=0.187 Sum_probs=84.0
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHH-HHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHH
Q 018518 53 EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIK-TFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNC 131 (354)
Q Consensus 53 ~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a-~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A 131 (354)
.+.+..+|+.+|+++||+++|++++|||.+|+++.++....+.+. ..+...+|+ +..+++++++.+|++++.++..|
T Consensus 67 ~~~s~~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl--~~~~pa~~V~~~CaSG~~Ai~~A 144 (452)
T PLN02287 67 KDTYPDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGF--PETVPVRTVNRQCSSGLQAVADV 144 (452)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCC--CCCcceEEEeccCchHHHHHHHH
Confidence 357889999999999999999999999999998877665545433 456677798 44589999999999999999999
Q ss_pred HHHHHhCCCCCCEEEEEEeecc
Q 018518 132 VNWVESASWDGRYGLVVCTDSA 153 (354)
Q Consensus 132 ~~~l~sg~~~~~~vLVV~~e~~ 153 (354)
...|++|.+ +.|||++.|.+
T Consensus 145 a~~I~sG~~--dvvLv~GvE~m 164 (452)
T PLN02287 145 AAAIKAGFY--DIGIGAGVESM 164 (452)
T ss_pred HHHHHcCCC--CeEEEEeEEec
Confidence 999999977 99999999986
No 82
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.09 E-value=3.6e-09 Score=104.95 Aligned_cols=227 Identities=15% Similarity=0.136 Sum_probs=136.6
Q ss_pred cceEEeEEEEEcCCccccHHHHHHhh--CCCc----chhe-ecc-----c-cEEE----eecCC----CCCHHHHHHHHH
Q 018518 7 KNVGILALDIYFPPTCVLQEALEVHD--GVSK----GKYT-VGL-----G-QDCM----AFCSE----VEDVISMSLTVV 65 (354)
Q Consensus 7 ~~v~I~~ig~~lP~~~v~~e~l~~~~--~~~~----~~~~-~gi-----g-~r~~----~~~~~----~e~~~~La~~Aa 65 (354)
++|.|+|+|...|-- .+.+++.+.+ |.+. .++. .+. | ...+ .+.+. -.....|+..|+
T Consensus 2 ~~v~ItG~g~~~p~g-~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~g~i~~f~~~~~~~~~~~~~~~~~~~l~~~aa 80 (411)
T PRK07314 2 RRVVVTGLGAVSPLG-NDVESTWKNLLAGKSGIGPITHFDTSDLAVKIAGEVKDFNPDDYMSRKEARRMDRFIQYGIAAA 80 (411)
T ss_pred CcEEEEcceEECCCc-CCHHHHHHHHHhCCCcEEECCcccccCCCccEEEEeCCcChhhcCCHHHhhcCCHHHHHHHHHH
Confidence 479999999999976 3667766543 2210 1110 000 0 0000 01000 012457899999
Q ss_pred HHHHHHcCCCcCCcC----EEEEecccCC---------------------CCCC-----CHHHHHHHHhcCcCCCCeeEE
Q 018518 66 TSLLEKYKIDPTQIG----RLEVGSETVI---------------------DKSK-----SIKTFLMQIFEKYGNTDIEGV 115 (354)
Q Consensus 66 ~~aL~~ag~~~~dId----~li~~t~t~~---------------------~~~P-----~~a~~l~~~Lgl~g~~~~~~~ 115 (354)
++||+++|++++++| .++++|..+. +..| ..+.++...+|+.| +.+
T Consensus 81 ~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~G----p~~ 156 (411)
T PRK07314 81 KQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYGAKG----PNH 156 (411)
T ss_pred HHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhCCCC----ccc
Confidence 999999999999888 5777764321 1111 24567888899832 356
Q ss_pred eecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeecc-c------c---------C--C--------C-CCCcccccee
Q 018518 116 DSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA-V------Y---------A--E--------G-PARPTGGAAA 168 (354)
Q Consensus 116 di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~-~------~---------~--~--------~-~~~~lfGDGA 168 (354)
-+..+|++++.||..|..+|++|.+ +.+||.++|.. . + . + . ...+++||||
T Consensus 157 tv~~acaSgl~Al~~A~~~I~~G~~--d~vlvgg~~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~dG~~~geGA 234 (411)
T PRK07314 157 SIVTACATGAHAIGDAARLIAYGDA--DVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDRDGFVMGEGA 234 (411)
T ss_pred cchhhhHHHHHHHHHHHHHHhcCCC--CEEEEeeecccCCHHHHHHHHHhccccCCCCCCCcCcCCCcCCCCCEeEEceE
Confidence 6778999999999999999999977 99999999863 1 0 0 0 0 1347899999
Q ss_pred EEEEEccCCC-----ceeeecceeeccc-ccccccccCCCCccccccCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCc
Q 018518 169 VAMLIGPDAP-----IAFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSM 242 (354)
Q Consensus 169 aA~lL~~~~~-----~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~ 242 (354)
+|+||++.+. ..+.....+.... +......| ...+. ....+++..++++ |+++
T Consensus 235 aavvL~~~~~A~~~g~~~~a~I~g~~~~~d~~~~~~~-------~~~~~--------~~~~a~~~Al~~a------gi~~ 293 (411)
T PRK07314 235 GILVLEELEHAKARGAKIYAEVVGYGMTGDAYHMTAP-------APDGE--------GAARAMKLALKDA------GINP 293 (411)
T ss_pred EEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCC-------CCCcH--------HHHHHHHHHHHHc------CCCH
Confidence 9999987531 1111001111100 00011111 11111 1223455555554 6999
Q ss_pred cCcceeeccccchHHHHHH
Q 018518 243 LDVDYFVFHSPYNKLVQKS 261 (354)
Q Consensus 243 ~did~~v~Hq~n~~i~~~~ 261 (354)
+|||++-.|-.+..+.+.+
T Consensus 294 ~dId~v~~hgtgt~~~d~~ 312 (411)
T PRK07314 294 EDIDYINAHGTSTPAGDKA 312 (411)
T ss_pred HHCCEEEccccCCccccHH
Confidence 9999999998877666555
No 83
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.05 E-value=1.9e-08 Score=98.74 Aligned_cols=223 Identities=15% Similarity=0.173 Sum_probs=132.4
Q ss_pred cceEEeEEEEEcCCccccHHHHHHhh--CCC---c-chhe--eccccEEEeecCCCCCHHHHHHHHHHHHHHHcCCCc--
Q 018518 7 KNVGILALDIYFPPTCVLQEALEVHD--GVS---K-GKYT--VGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDP-- 76 (354)
Q Consensus 7 ~~v~I~~ig~~lP~~~v~~e~l~~~~--~~~---~-~~~~--~gig~r~~~~~~~~e~~~~La~~Aa~~aL~~ag~~~-- 76 (354)
++|.|+|+|...|--. .+++.+.+ |.+ + ..+. ...-.+. +.........++..|+++||+++|+++
T Consensus 2 ~rVvITG~G~vsp~G~--~~~~~~~l~~G~sgi~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~Al~dagl~~~~ 77 (381)
T PRK05952 2 MKVVVTGIGLVSALGD--LEQSWQRLLQGKSGIKLHQPFPELPPLPLGL--IGNQPSSLEDLTKTVVTAALKDAGLTPPL 77 (381)
T ss_pred CeEEEEeeEEECcccC--HHHHHHHHHcCCCCeEeCCccccccccccee--eccccccccHHHHHHHHHHHHhcCCCCCC
Confidence 4799999999999886 56655543 221 0 1110 0000000 000001123477789999999999965
Q ss_pred CCcCEEEEecccCC--------------------C--------CCC-CHHHHHHHHhcCcCCCCeeEEeecCcChhHHHH
Q 018518 77 TQIGRLEVGSETVI--------------------D--------KSK-SIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAA 127 (354)
Q Consensus 77 ~dId~li~~t~t~~--------------------~--------~~P-~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~a 127 (354)
+++. ++++|..+. + ..| ..+..+...+|+.| +.+-+..+|++++.|
T Consensus 78 ~~~G-v~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~~G----p~~ti~~aCasg~~A 152 (381)
T PRK05952 78 TDCG-VVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQG----PVLAPMAACATGLWA 152 (381)
T ss_pred CCEE-EEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCCCC----ccccccchhHHHHHH
Confidence 4454 445553221 0 011 24677888999833 357788999999999
Q ss_pred HHHHHHHHHhCCCCCCEEEEEEeecc-c------c------C--------CCCCCccccceeEEEEEccCCC-----cee
Q 018518 128 LFNCVNWVESASWDGRYGLVVCTDSA-V------Y------A--------EGPARPTGGAAAVAMLIGPDAP-----IAF 181 (354)
Q Consensus 128 L~~A~~~l~sg~~~~~~vLVV~~e~~-~------~------~--------~~~~~~lfGDGAaA~lL~~~~~-----~~~ 181 (354)
|..|..+|++|.+ +.+||.++|.. . + . .+...+++||||+++||++.+. ..+
T Consensus 153 i~~A~~~i~~G~~--d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~rPfd~~r~G~v~gEGaa~lvLe~~~~A~~rg~~i 230 (381)
T PRK05952 153 IAQGVELIQTGQC--QRVIAGAVEAPITPLTLAGFQQMGALAKTGAYPFDRQREGLVLGEGGAILVLESAELAQKRGAKI 230 (381)
T ss_pred HHHHHHHHHcCCC--CEEEEccccccCCHHHHHHHHhcCCcCCCCCCCCCCCCCCccccccEEEEEEeeHHHHHhCCCce
Confidence 9999999999976 99999999862 1 0 0 1113478999999999987531 111
Q ss_pred eecceeecc-cccccccccCCCCccccccCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccCcceeeccccchHHHHH
Q 018518 182 ESKLRGSHM-SHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQK 260 (354)
Q Consensus 182 ~~~~~~~~~-~~~~~~~~p~~~~~~~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~did~~v~Hq~n~~i~~~ 260 (354)
.....+... .+......| ..++ .....+++..++.+ |++++|||++-.|-.+....+.
T Consensus 231 ~a~I~g~~~~~d~~~~~~~-------~~~~--------~~~~~ai~~Al~~a------gi~p~dId~i~~hgtgt~~~D~ 289 (381)
T PRK05952 231 YGQILGFGLTCDAYHMSAP-------EPDG--------KSAIAAIQQCLARS------GLTPEDIDYIHAHGTATRLNDQ 289 (381)
T ss_pred EEEEEEEEecCCCCCCCCC-------CCCH--------HHHHHHHHHHHHHh------CCCHHHeeEEEccCCCCCCCcH
Confidence 000111110 000001111 1111 12345556666665 6999999999999877666555
Q ss_pred H
Q 018518 261 S 261 (354)
Q Consensus 261 ~ 261 (354)
+
T Consensus 290 ~ 290 (381)
T PRK05952 290 R 290 (381)
T ss_pred H
Confidence 4
No 84
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=99.05 E-value=1.1e-09 Score=108.36 Aligned_cols=95 Identities=12% Similarity=0.127 Sum_probs=82.6
Q ss_pred CCCHHHHHHHHHHHHHHHc-CCCcCCcCEEEEecccCCC-CCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHH
Q 018518 54 VEDVISMSLTVVTSLLEKY-KIDPTQIGRLEVGSETVID-KSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNC 131 (354)
Q Consensus 54 ~e~~~~La~~Aa~~aL~~a-g~~~~dId~li~~t~t~~~-~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A 131 (354)
+.+..+|+.+|+++||+++ |++++|||.+|+++..+.. ..+..+..++..+|+ ++++++.++.+|+++..++..|
T Consensus 24 ~~~~~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl---~~~p~~~v~~~caSG~~av~~A 100 (406)
T PRK07851 24 DMRPDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGY---DFLPGTTVNRYCSSSLQTTRMA 100 (406)
T ss_pred CCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCC---CCCCeeeeeccchhHHHHHHHH
Confidence 4678999999999999997 9999999999987654332 135667889999999 5588999999999999999999
Q ss_pred HHHHHhCCCCCCEEEEEEeecc
Q 018518 132 VNWVESASWDGRYGLVVCTDSA 153 (354)
Q Consensus 132 ~~~l~sg~~~~~~vLVV~~e~~ 153 (354)
...|++|.+ +.|||+++|++
T Consensus 101 a~~I~sG~~--d~vLv~G~e~~ 120 (406)
T PRK07851 101 FHAIKAGEG--DVFISAGVETV 120 (406)
T ss_pred HHHHHCCCC--CEEEEeeEEec
Confidence 999999977 99999999986
No 85
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=99.03 E-value=9.8e-09 Score=101.34 Aligned_cols=138 Identities=16% Similarity=0.190 Sum_probs=91.5
Q ss_pred CCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeecc-c------------------
Q 018518 94 KSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA-V------------------ 154 (354)
Q Consensus 94 P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~-~------------------ 154 (354)
+.++.+|+..||+ +. +++.+..+|+++++||..|..+|++|.+ +.+||+++|.. .
T Consensus 137 ~~~a~~ia~~lgl---~G-p~~~i~~acas~~~Al~~A~~~I~~G~~--d~vlvgg~d~~~~~~~~~~~~~~~l~~~~~~ 210 (392)
T PRK09185 137 GSLADFLRAYLGL---SG-PAYTISTACSSSAKVFASARRLLEAGLC--DAAIVGGVDSLCRLTLNGFNSLESLSPQPCR 210 (392)
T ss_pred cHHHHHHHHHhCC---CC-CcccccChhHHHHHHHHHHHHHHHcCCC--CEEEEeeccccChHHHHHHHhccccCCCccC
Confidence 4578889999999 22 5788889999999999999999999977 99999999853 1
Q ss_pred -cCCCCCCccccceeEEEEEccCCC--ceeeecceeecccccccccccCCCCccccccCcchHHHHHHHHHHHHHHHHHH
Q 018518 155 -YAEGPARPTGGAAAVAMLIGPDAP--IAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQK 231 (354)
Q Consensus 155 -~~~~~~~~lfGDGAaA~lL~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~G~~~~~~~~~~~~~~~~~~l~~ 231 (354)
|..+...+++||||+++||++... ..+.. .+...+ ......| ..++ .....+++..++.
T Consensus 211 Pfd~~~~G~~~gEGaa~vVLe~~~~~~~~I~g--~g~~~d-~~~~~~~-------~~~~--------~~~~~a~~~Al~~ 272 (392)
T PRK09185 211 PFSANRDGINIGEAAAFFLLEREDDAAVALLG--VGESSD-AHHMSAP-------HPEG--------LGAILAMQQALAD 272 (392)
T ss_pred CCcCCCCccceeceEEEEEEEEcCCCcEEEEE--EEEeCC-CCCCCCC-------CCCH--------HHHHHHHHHHHHH
Confidence 011123578999999999998732 22221 111111 1111111 1111 1123455555655
Q ss_pred HHhhhcCCCCccCcceeeccccchHHHHHH
Q 018518 232 FEKLEGRQFSMLDVDYFVFHSPYNKLVQKS 261 (354)
Q Consensus 232 ~~~~~~~g~~~~did~~v~Hq~n~~i~~~~ 261 (354)
+ |++++|||++.+|-.+.+..+.+
T Consensus 273 A------gl~~~dId~v~~hgtgt~~~D~~ 296 (392)
T PRK09185 273 A------GLAPADIGYINLHGTATPLNDAM 296 (392)
T ss_pred c------CCCHHHccEEEeCCCCCcCCCHH
Confidence 5 69999999999998777655433
No 86
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=99.02 E-value=1.1e-09 Score=108.18 Aligned_cols=94 Identities=10% Similarity=0.113 Sum_probs=78.5
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCC---CHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHH
Q 018518 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSK---SIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFN 130 (354)
Q Consensus 54 ~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P---~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~ 130 (354)
+.+..+|+.+|+++||+++|++|+|||.+|+++.++++..| +....+.. ++ +..+++++++.+|++++.++.+
T Consensus 29 ~~~~~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a--~~--~~~~p~~~V~~~CaSg~~ai~~ 104 (394)
T PRK06445 29 NIRPEELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLA--RL--PYNIPAMAVDRQCASSLTTVSI 104 (394)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHc--CC--CCCCcchhhhhhhHHHHHHHHH
Confidence 46789999999999999999999999999999988754333 22233333 33 2468899999999999999999
Q ss_pred HHHHHHhCCCCCCEEEEEEeecc
Q 018518 131 CVNWVESASWDGRYGLVVCTDSA 153 (354)
Q Consensus 131 A~~~l~sg~~~~~~vLVV~~e~~ 153 (354)
|..+|++|.+ +++||++.|++
T Consensus 105 A~~~I~sG~~--d~vLv~G~e~m 125 (394)
T PRK06445 105 GAMEIATGMA--DIVIAGGVEHM 125 (394)
T ss_pred HHHHHHcCCC--CEEEEeeeccc
Confidence 9999999977 99999999976
No 87
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.02 E-value=1.7e-08 Score=100.62 Aligned_cols=177 Identities=14% Similarity=0.082 Sum_probs=111.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCc-C----EEEEecccCCC---------------------CCC-----CHHHHHHHHhc
Q 018518 57 VISMSLTVVTSLLEKYKIDPTQI-G----RLEVGSETVID---------------------KSK-----SIKTFLMQIFE 105 (354)
Q Consensus 57 ~~~La~~Aa~~aL~~ag~~~~dI-d----~li~~t~t~~~---------------------~~P-----~~a~~l~~~Lg 105 (354)
...|+..|++++|+++|++++++ + .++++|..+.+ ..| ..+.+|...+|
T Consensus 82 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 161 (424)
T PRK06333 82 FILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYG 161 (424)
T ss_pred HHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHHHhC
Confidence 34689999999999999988776 3 56666653321 111 13567888899
Q ss_pred CcCCCCeeEEeecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeecc-c------------c----CC------C----
Q 018518 106 KYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA-V------------Y----AE------G---- 158 (354)
Q Consensus 106 l~g~~~~~~~di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~-~------------~----~~------~---- 158 (354)
+.| +++-+..+|++++.||..|..+|++|.+ +.+||.++|.. . + .. +
T Consensus 162 l~G----p~~~v~~aCaSg~~Al~~A~~~I~~G~~--d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~~~~~Pfd~ 235 (424)
T PRK06333 162 FKG----PLGAPVTACAAGVQAIGDAARLIRSGEA--DVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRPFDR 235 (424)
T ss_pred CCC----CCccccchhHHHHHHHHHHHHHHHcCCC--CEEEEeeecccCCHHHHHHHHHcccccccCCCCCCcCCCCCCC
Confidence 832 3566789999999999999999999977 99999999973 0 1 10 0
Q ss_pred -CCCccccceeEEEEEccCCC-----ceeeecceeecc-cccccccccCCCCccccccCcchHHHHHHHHHHHHHHHHHH
Q 018518 159 -PARPTGGAAAVAMLIGPDAP-----IAFESKLRGSHM-SHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQK 231 (354)
Q Consensus 159 -~~~~lfGDGAaA~lL~~~~~-----~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~G~~~~~~~~~~~~~~~~~~l~~ 231 (354)
...++.||||+++||++.+. ..+.....+... .+...+..| ..++. ....+++..++.
T Consensus 236 ~~~G~~~gEGaa~lvLe~~~~A~~rg~~i~a~i~G~~~~~d~~~~~~~-------~~~~~--------~~~~a~~~Al~~ 300 (424)
T PRK06333 236 DRDGFVMGEGAGILVIETLEHALARGAPPLAELVGYGTSADAYHMTAG-------PEDGE--------GARRAMLIALRQ 300 (424)
T ss_pred CCCCeEEecceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCC-------CCCcH--------HHHHHHHHHHHH
Confidence 12467899999999986421 111100111111 011111111 11121 133445555555
Q ss_pred HHhhhcCCCCccCcceeeccccchHHHHH
Q 018518 232 FEKLEGRQFSMLDVDYFVFHSPYNKLVQK 260 (354)
Q Consensus 232 ~~~~~~~g~~~~did~~v~Hq~n~~i~~~ 260 (354)
+ |++++|||++-.|-.+...-+.
T Consensus 301 A------gi~p~dId~i~~hgtgt~~~D~ 323 (424)
T PRK06333 301 A------GIPPEEVQHLNAHATSTPVGDL 323 (424)
T ss_pred c------CCCHHHCCEEeccCCCCccchH
Confidence 4 6999999999999766665433
No 88
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.99 E-value=4.8e-08 Score=97.07 Aligned_cols=227 Identities=14% Similarity=0.089 Sum_probs=134.0
Q ss_pred cceEEeEEEEEcCCccccHHHHHHhh--CCC---c-chhe-eccccEEEe-ec--------CCC-----CCHHHHHHHHH
Q 018518 7 KNVGILALDIYFPPTCVLQEALEVHD--GVS---K-GKYT-VGLGQDCMA-FC--------SEV-----EDVISMSLTVV 65 (354)
Q Consensus 7 ~~v~I~~ig~~lP~~~v~~e~l~~~~--~~~---~-~~~~-~gig~r~~~-~~--------~~~-----e~~~~La~~Aa 65 (354)
.+|.|+|+|...|-- .+.+++.+.+ |.+ + +++. .....+.-. +. .+. .....++..|+
T Consensus 4 ~~VvItG~g~~~p~g-~~~~~~w~~L~~g~s~i~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~d~~~~~~l~a~ 82 (414)
T PRK08722 4 RRVVVTGMGMLSPVG-NTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKDFNCEEYMSKKDARKMDLFIQYGIAAG 82 (414)
T ss_pred CCEEEEeeEEECCCC-CCHHHHHHHHHhCCCeeeecCccccccCCCceeEEcCCCChhHcCCHHHHhhcCHHHHHHHHHH
Confidence 479999999999987 4677766543 221 0 1111 000000000 00 000 11235888999
Q ss_pred HHHHHHcCCCcCCcC----EEEEecccCCC-------------------------CCC-CHHHHHHHHhcCcCCCCeeEE
Q 018518 66 TSLLEKYKIDPTQIG----RLEVGSETVID-------------------------KSK-SIKTFLMQIFEKYGNTDIEGV 115 (354)
Q Consensus 66 ~~aL~~ag~~~~dId----~li~~t~t~~~-------------------------~~P-~~a~~l~~~Lgl~g~~~~~~~ 115 (354)
.+||+++|+++.+.+ .++++|..+.+ ..| .++.+|...+|+.| +.+
T Consensus 83 ~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl~G----p~~ 158 (414)
T PRK08722 83 IQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRG----PNI 158 (414)
T ss_pred HHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCCCC----Ccc
Confidence 999999999765433 35566643211 011 26778888899843 357
Q ss_pred eecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeecc-c------------cC-----C----C-----CCCcccccee
Q 018518 116 DSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA-V------------YA-----E----G-----PARPTGGAAA 168 (354)
Q Consensus 116 di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~-~------------~~-----~----~-----~~~~lfGDGA 168 (354)
-+..+|++++.||..|..+|++|.+ +.+||.++|.. . +. + + ...++.||||
T Consensus 159 ti~~aCas~~~Al~~A~~~i~~G~~--d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~~G~~~gEGa 236 (414)
T PRK08722 159 AISTACTTGLHNIGHAARMIAYGDA--DAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDRDGFVLGDGA 236 (414)
T ss_pred ccccccHHHHHHHHHHHHHHHcCCC--CEEEEecccccCCHHHHHHHHHcCCcccCCCCCccccCcCcCCCCceEeeceE
Confidence 7889999999999999999999977 99999999874 1 10 0 0 1246789999
Q ss_pred EEEEEccCCC-----ceeeecceeecc-cccccccccCCCCccccccCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCc
Q 018518 169 VAMLIGPDAP-----IAFESKLRGSHM-SHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSM 242 (354)
Q Consensus 169 aA~lL~~~~~-----~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~ 242 (354)
+++||++.+. ..+.....+... .+...+..|. .+|. ....+++..++.+ |+++
T Consensus 237 aalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~-------~~~~--------~~~~a~~~Al~~a------gi~~ 295 (414)
T PRK08722 237 GMMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPS-------EDGS--------GGALAMEAAMRDA------GVTG 295 (414)
T ss_pred EEEEEccHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCC-------cchH--------HHHHHHHHHHHHc------CCCH
Confidence 9999987531 111100111110 0111112221 1111 1233445555554 6999
Q ss_pred cCcceeeccccchHHHHHH
Q 018518 243 LDVDYFVFHSPYNKLVQKS 261 (354)
Q Consensus 243 ~did~~v~Hq~n~~i~~~~ 261 (354)
+|||++-.|-.+....+.+
T Consensus 296 ~did~ie~hgtgt~~~D~~ 314 (414)
T PRK08722 296 EQIGYVNAHGTSTPAGDVA 314 (414)
T ss_pred HHcCEEEccCccCCCCCHH
Confidence 9999999998766555444
No 89
>PRK08256 lipid-transfer protein; Provisional
Probab=98.98 E-value=2.1e-09 Score=106.08 Aligned_cols=92 Identities=21% Similarity=0.121 Sum_probs=78.2
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHH
Q 018518 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVN 133 (354)
Q Consensus 54 ~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~ 133 (354)
..+..+|+.+|+++||+++|+++++||.+++++..++.. . ...+...+|+ ..+++++++.+|+++..++..|..
T Consensus 19 ~~~~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~-~--~~~~~~~lGl---~~~~~~~v~~~caSg~~ai~~A~~ 92 (391)
T PRK08256 19 SWDYPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDST-S--GQRALYEVGM---TGIPIVNVNNNCSTGSTALFLARQ 92 (391)
T ss_pred CCCHHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcc-h--hHHHHHHcCC---CCCCCcccccccHHHHHHHHHHHH
Confidence 467889999999999999999999999999887665432 1 2346678898 556788999999999999999999
Q ss_pred HHHhCCCCCCEEEEEEeecc
Q 018518 134 WVESASWDGRYGLVVCTDSA 153 (354)
Q Consensus 134 ~l~sg~~~~~~vLVV~~e~~ 153 (354)
+|++|.+ ++|||+++|.+
T Consensus 93 ~I~sG~~--d~vLv~g~e~~ 110 (391)
T PRK08256 93 AVRSGAA--DCALALGFEQM 110 (391)
T ss_pred HHHCCCC--CEEEEEEEeec
Confidence 9999987 99999988864
No 90
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=98.95 E-value=4.5e-09 Score=103.91 Aligned_cols=95 Identities=18% Similarity=0.153 Sum_probs=80.4
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHH
Q 018518 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVN 133 (354)
Q Consensus 54 ~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~ 133 (354)
+.+..+|+.+|++++|+++|++++|||.+++++...++........+.+.+|+ +..+++.++.+|++++.++..|..
T Consensus 24 ~~~~~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl---~~~~~~~v~~~c~sg~~ai~~A~~ 100 (398)
T PRK06157 24 DAGAEDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRL---PNIPVTRVENFCATGSEAFRGAVY 100 (398)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCC---CCCCEEEEecccHHHHHHHHHHHH
Confidence 45678999999999999999999999999988754432222234678889999 457888999999999999999999
Q ss_pred HHHhCCCCCCEEEEEEeecc
Q 018518 134 WVESASWDGRYGLVVCTDSA 153 (354)
Q Consensus 134 ~l~sg~~~~~~vLVV~~e~~ 153 (354)
.|++|.+ +.+|++++|++
T Consensus 101 ~I~sG~~--d~vlv~G~e~~ 118 (398)
T PRK06157 101 AVASGAY--DIALALGVEKL 118 (398)
T ss_pred HHHCCCC--CEEEEEEEeec
Confidence 9999977 99999999975
No 91
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=98.93 E-value=3.9e-09 Score=105.24 Aligned_cols=98 Identities=19% Similarity=0.235 Sum_probs=84.1
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHH
Q 018518 53 EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCV 132 (354)
Q Consensus 53 ~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~ 132 (354)
.+.+..+|+.+|++++|+++|++|++||.+|+++..+....+.++..+...+|+ +..++++.|+.+|++++.|+..|.
T Consensus 25 ~~~~~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl--~~~~P~~tV~~aCaSG~~Ai~~Aa 102 (428)
T PRK08963 25 HGIPAVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGM--NVHTDAYSVSRACATSFQAVANVA 102 (428)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCC--CCCCcceeehhhhHHHHHHHHHHH
Confidence 356788999999999999999999999999999764432224556668888999 446899999999999999999999
Q ss_pred HHHHhCCCCCCEEEEEEeeccc
Q 018518 133 NWVESASWDGRYGLVVCTDSAV 154 (354)
Q Consensus 133 ~~l~sg~~~~~~vLVV~~e~~~ 154 (354)
..|++|.+ +.+|++++|.++
T Consensus 103 ~~I~sG~~--dvvLvgG~Esms 122 (428)
T PRK08963 103 ESIMAGTI--DIGIAGGADSSS 122 (428)
T ss_pred HHHHCCCC--CEEEEecccccC
Confidence 99999977 999999999873
No 92
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=98.93 E-value=2.1e-08 Score=100.36 Aligned_cols=177 Identities=14% Similarity=0.098 Sum_probs=111.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcC-----CcCEEEEecccCCC-----------------C--------CC-CHHHHHHHHhc
Q 018518 57 VISMSLTVVTSLLEKYKIDPT-----QIGRLEVGSETVID-----------------K--------SK-SIKTFLMQIFE 105 (354)
Q Consensus 57 ~~~La~~Aa~~aL~~ag~~~~-----dId~li~~t~t~~~-----------------~--------~P-~~a~~l~~~Lg 105 (354)
...|+..|+.+||+++|+++. +...++++|..+.. . .+ ..+.+|...+|
T Consensus 93 ~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~g 172 (437)
T PLN02836 93 FIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRYG 172 (437)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHhC
Confidence 457899999999999998542 45677777643221 0 11 24567888899
Q ss_pred CcCCCCeeEEeecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeecc-c----------------cC----------C-
Q 018518 106 KYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA-V----------------YA----------E- 157 (354)
Q Consensus 106 l~g~~~~~~~di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~-~----------------~~----------~- 157 (354)
+. -+++-+..+|++++.||..|..+|++|.+ +.+||.++|.. . +. +
T Consensus 173 l~----Gp~~tv~~acaSg~~Al~~A~~~I~~G~~--d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~pfd~ 246 (437)
T PLN02836 173 FQ----GPNHAAVTACATGAHSIGDAFRMIQFGDA--DVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPTEASRPFDC 246 (437)
T ss_pred CC----CceeceeChhHHHHHHHHHHHHHHHcCCC--CEEEEccccccCCHHHHHHHHHhhhhhcccCCCcccccCCccc
Confidence 83 34677889999999999999999999977 89999888862 0 00 0
Q ss_pred CCCCccccceeEEEEEccCCC---c--eeeecceeecc-cccccccccCCCCccccccCcchHHHHHHHHHHHHHHHHHH
Q 018518 158 GPARPTGGAAAVAMLIGPDAP---I--AFESKLRGSHM-SHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQK 231 (354)
Q Consensus 158 ~~~~~lfGDGAaA~lL~~~~~---~--~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~G~~~~~~~~~~~~~~~~~~l~~ 231 (354)
+...+++||||+|+||++.+. . .+.....+... .+......| ..++. ....+++..++.
T Consensus 247 ~~~G~~~gEGaaalVLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p-------~~~~~--------~~~~a~~~Al~~ 311 (437)
T PLN02836 247 DRDGFVIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSGDAHHITQP-------HEDGR--------GAVLAMTRALQQ 311 (437)
T ss_pred CCCCeeeecCEEEEEEeeHHHHHHCCCceEEEEEeeeecCCCCCCcCC-------CcchH--------HHHHHHHHHHHH
Confidence 113578899999999987531 0 01000011110 000111111 11221 123344555555
Q ss_pred HHhhhcCCCCccCcceeeccccchHHHHH
Q 018518 232 FEKLEGRQFSMLDVDYFVFHSPYNKLVQK 260 (354)
Q Consensus 232 ~~~~~~~g~~~~did~~v~Hq~n~~i~~~ 260 (354)
+ |++++|||++-.|-.+...-+.
T Consensus 312 A------gi~~~dId~ve~hgtgt~~~D~ 334 (437)
T PLN02836 312 S------GLHPNQVDYVNAHATSTPLGDA 334 (437)
T ss_pred c------CCCHhHcCEEEccCCcCcCcCH
Confidence 4 6999999999999777654444
No 93
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.93 E-value=2.6e-08 Score=98.81 Aligned_cols=163 Identities=17% Similarity=0.138 Sum_probs=107.5
Q ss_pred cceEEeEEEEEcCCccccHHHHHHhh--CCC----cchhe-----ecc-c-cEEE---eecCC-----CCCHHHHHHHHH
Q 018518 7 KNVGILALDIYFPPTCVLQEALEVHD--GVS----KGKYT-----VGL-G-QDCM---AFCSE-----VEDVISMSLTVV 65 (354)
Q Consensus 7 ~~v~I~~ig~~lP~~~v~~e~l~~~~--~~~----~~~~~-----~gi-g-~r~~---~~~~~-----~e~~~~La~~Aa 65 (354)
.+|.|+|+|...|--. +.+++.+.+ |.+ .+++. ..+ | +..+ .+.++ ......|+..|+
T Consensus 2 ~~v~ItG~g~vsp~G~-~~~~~~~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~f~~~~~~~~~~~~~~~~~~~l~~~Aa 80 (406)
T PRK08439 2 KRVVVTGIGMINSLGL-NKESSFKAICNGECGIKKITLFDASDFPVQIAGEITDFDPTEVMDPKEVKKADRFIQLGLKAA 80 (406)
T ss_pred CCEEEEeeEEECCCcC-CHHHHHHHHHcCCCceEeCCCccccCCCCceeEEcCCcChhhcCCHHHHhhcCHHHHHHHHHH
Confidence 3799999999999874 666665543 221 11111 000 0 0000 00000 112457899999
Q ss_pred HHHHHHcCCCcCCcC----EEEEecccCCC-------------------------CCC-CHHHHHHHHhcCcCCCCeeEE
Q 018518 66 TSLLEKYKIDPTQIG----RLEVGSETVID-------------------------KSK-SIKTFLMQIFEKYGNTDIEGV 115 (354)
Q Consensus 66 ~~aL~~ag~~~~dId----~li~~t~t~~~-------------------------~~P-~~a~~l~~~Lgl~g~~~~~~~ 115 (354)
++||+++|+++++++ .+++++..+.. ..| ..+..|...+|+.| +.+
T Consensus 81 ~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~G----p~~ 156 (406)
T PRK08439 81 REAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGLKG----PNL 156 (406)
T ss_pred HHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhCCCC----Ccc
Confidence 999999999987776 34554432110 111 46778999999932 357
Q ss_pred eecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeecc-c------------cC-------------C-CCCCcccccee
Q 018518 116 DSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA-V------------YA-------------E-GPARPTGGAAA 168 (354)
Q Consensus 116 di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~-~------------~~-------------~-~~~~~lfGDGA 168 (354)
.+..+|+++++||..|..+|++|.+ +.+||+++|.. . +. | ....+++|+||
T Consensus 157 ~~~~acas~~~Al~~A~~~i~~G~~--d~~lv~g~d~~l~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGa 234 (406)
T PRK08439 157 SSVTACAAGTHAIIEAVKTIMLGGA--DKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDKDRDGFVMGEGA 234 (406)
T ss_pred ccccHhHHHHHHHHHHHHHHHcCCC--CEEEEecchhccCHHHHHHHHHhCccccCCCCCccCcCCccCCCCcEEeeCce
Confidence 7789999999999999999999977 99999999862 0 00 0 11347889999
Q ss_pred EEEEEccC
Q 018518 169 VAMLIGPD 176 (354)
Q Consensus 169 aA~lL~~~ 176 (354)
+++||++.
T Consensus 235 ~~lvLe~~ 242 (406)
T PRK08439 235 GALVLEEY 242 (406)
T ss_pred EEEEEccH
Confidence 99999874
No 94
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=98.92 E-value=5.9e-09 Score=103.01 Aligned_cols=97 Identities=16% Similarity=0.181 Sum_probs=84.3
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCC-CCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHH
Q 018518 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDK-SKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCV 132 (354)
Q Consensus 54 ~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~-~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~ 132 (354)
+.+..+|+.+|++++|+++|+++++||.+++++..+... .+.++..+...+|+ +..++++.|+.+|++++.|+..|.
T Consensus 23 ~~~~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl--p~~~p~~tV~~~CaSG~~Ai~~A~ 100 (401)
T PRK08131 23 SVRPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGL--PVTVPGQTVNRLCASGLAAVIDAA 100 (401)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCC--CCCCceeeeechhhhHHHHHHHHH
Confidence 467899999999999999999999999999998754322 25566668888998 457999999999999999999999
Q ss_pred HHHHhCCCCCCEEEEEEeeccc
Q 018518 133 NWVESASWDGRYGLVVCTDSAV 154 (354)
Q Consensus 133 ~~l~sg~~~~~~vLVV~~e~~~ 154 (354)
..|++|.+ +.+|+++.|.++
T Consensus 101 ~~I~sG~~--dvvlagG~Esms 120 (401)
T PRK08131 101 RAITCGEG--DLYLAGGVESMS 120 (401)
T ss_pred HHHHCCCC--CEEEEEEecCCC
Confidence 99999977 999999999873
No 95
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=98.92 E-value=7.1e-09 Score=102.14 Aligned_cols=96 Identities=7% Similarity=0.046 Sum_probs=81.2
Q ss_pred CCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHHH
Q 018518 55 EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNW 134 (354)
Q Consensus 55 e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~~ 134 (354)
.+..+|+.+|++++|+++|++++|||.+|+++..+....+..+..+...+|+ +..++++.++.+|++++.++..|...
T Consensus 24 ~~~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl--~~~~p~~~v~~~caSg~~av~~Aa~~ 101 (388)
T PRK06366 24 IKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGL--PFGVTKYTVNVVCASGMLAVESAARE 101 (388)
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCC--CCCCcceeeechhhHHHHHHHHHHHH
Confidence 5788999999999999999999999999998654322123446678899999 44588899999999999999999999
Q ss_pred HHhCCCCCCEEEEEEeeccc
Q 018518 135 VESASWDGRYGLVVCTDSAV 154 (354)
Q Consensus 135 l~sg~~~~~~vLVV~~e~~~ 154 (354)
|++|.+ +.+|+++.|+++
T Consensus 102 I~sG~~--d~vla~G~e~ms 119 (388)
T PRK06366 102 IMLGER--DLVIAGGMENMS 119 (388)
T ss_pred HhcCCC--CEEEEEeeEccc
Confidence 999977 999998889863
No 96
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=98.90 E-value=8.5e-09 Score=102.85 Aligned_cols=109 Identities=8% Similarity=-0.064 Sum_probs=83.6
Q ss_pred eeccccEEEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHH-HHHHHHhcCcCCCCeeEEeec
Q 018518 40 TVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIK-TFLMQIFEKYGNTDIEGVDST 118 (354)
Q Consensus 40 ~~gig~r~~~~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a-~~l~~~Lgl~g~~~~~~~di~ 118 (354)
..|+|...+.....+.+..+|+.+|+++||+++|++++|||.+++++.......+..+ ..+...||+ +..+++.++
T Consensus 20 IvG~g~Tpfgr~~~~~~~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl---~~~~~~~v~ 96 (430)
T PRK06365 20 MVAAGVTKFDKASPYMDFRERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGL---VPKPSKRIE 96 (430)
T ss_pred EEEeeecCccccCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCC---CCCceEEEe
Confidence 3566655432222345678999999999999999999999998876543222112222 446789999 458888999
Q ss_pred CcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeecc
Q 018518 119 NACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA 153 (354)
Q Consensus 119 ~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~ 153 (354)
.+|+++..++..|...|++|.+ +.|||+++|+.
T Consensus 97 ~~~aSg~~ai~~A~~~I~sG~~--~~vLv~G~e~~ 129 (430)
T PRK06365 97 GGGATGGLAFQAGYEEIASGRM--DCVAVYGFETM 129 (430)
T ss_pred CCcHHHHHHHHHHHHHHHcCCC--CEEEEEEeeec
Confidence 9999999999999999999977 99999999953
No 97
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=98.90 E-value=8.6e-09 Score=101.49 Aligned_cols=97 Identities=11% Similarity=0.102 Sum_probs=81.7
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCC-CCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHH
Q 018518 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKS-KSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCV 132 (354)
Q Consensus 54 ~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~-P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~ 132 (354)
+.++.+|+.+|++++|+++|++|++||.+++++....... ...+-.+...+|+ +.+++++.|+++|++++.|+..|.
T Consensus 23 ~~~~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl--~~~~p~~tV~~~CaSG~~A~~~A~ 100 (387)
T PRK07850 23 GLHAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGL--PYHVGATTIDCQCGSAQQANHLVA 100 (387)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCC--CCCCceEEEecccccHHHHHHHHH
Confidence 4467899999999999999999999999999875432221 2344566667899 447999999999999999999999
Q ss_pred HHHHhCCCCCCEEEEEEeeccc
Q 018518 133 NWVESASWDGRYGLVVCTDSAV 154 (354)
Q Consensus 133 ~~l~sg~~~~~~vLVV~~e~~~ 154 (354)
..|++|.+ +.+|+++.|+++
T Consensus 101 ~~I~sG~~--dvvla~G~E~mS 120 (387)
T PRK07850 101 GLIAAGAI--DVGIACGVEAMS 120 (387)
T ss_pred HHHHCCCC--CEEEEEeEecCC
Confidence 99999977 999999999983
No 98
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=98.89 E-value=2.5e-08 Score=99.34 Aligned_cols=176 Identities=16% Similarity=0.202 Sum_probs=109.9
Q ss_pred CHHHHHHHHHHHHHHHcCCC-cCCcCE----EEEecccCCCC---------------------CC-----CHHHHHHHHh
Q 018518 56 DVISMSLTVVTSLLEKYKID-PTQIGR----LEVGSETVIDK---------------------SK-----SIKTFLMQIF 104 (354)
Q Consensus 56 ~~~~La~~Aa~~aL~~ag~~-~~dId~----li~~t~t~~~~---------------------~P-----~~a~~l~~~L 104 (354)
....|+..|+++||+++|++ +++++. +++++..+... .| .++..|...+
T Consensus 76 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~ 155 (421)
T PTZ00050 76 RATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKH 155 (421)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHHh
Confidence 35789999999999999998 666553 44444332210 00 2355677778
Q ss_pred cCcCCCCeeEEeecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeecc-c----------------cC--C----C---
Q 018518 105 EKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA-V----------------YA--E----G--- 158 (354)
Q Consensus 105 gl~g~~~~~~~di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~-~----------------~~--~----~--- 158 (354)
|+.| +++-+..+|++++.||..|..+|++|.+ +.+||.++|.. . +. + +
T Consensus 156 ~l~G----p~~ti~~aCaSg~~Al~~A~~~I~~G~~--d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd 229 (421)
T PTZ00050 156 KLKG----PSGSAVTACATGAHCIGEAFRWIKYGEA--DIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFD 229 (421)
T ss_pred CCCC----cccccccHhHHHHHHHHHHHHHHHcCCC--CEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCc
Confidence 8833 3577889999999999999999999977 99999999862 0 00 0 0
Q ss_pred --CCCccccceeEEEEEccCCC-----ceeeecceeeccc-ccccccccCCCCccccccCcchHHHHHHHHHHHHHHHHH
Q 018518 159 --PARPTGGAAAVAMLIGPDAP-----IAFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQ 230 (354)
Q Consensus 159 --~~~~lfGDGAaA~lL~~~~~-----~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~G~~~~~~~~~~~~~~~~~~l~ 230 (354)
...++.||||+|+||++.+. ..+.....+.... +...+..| ..+| .....+++..++
T Consensus 230 ~~~~G~~~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p-------~~~~--------~~~~~ai~~Al~ 294 (421)
T PTZ00050 230 KDRAGFVMGEGAGILVLEELEHALRRGAKIYAEIRGYGSSSDAHHITAP-------HPDG--------RGARRCMENALK 294 (421)
T ss_pred CCCCCEeeccceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCC-------CCCh--------HHHHHHHHHHHH
Confidence 12467899999999987531 1111001111100 00111111 1111 123345556566
Q ss_pred H-HHhhhcCCCCccCcceeeccccchHHH
Q 018518 231 K-FEKLEGRQFSMLDVDYFVFHSPYNKLV 258 (354)
Q Consensus 231 ~-~~~~~~~g~~~~did~~v~Hq~n~~i~ 258 (354)
. + |++++|||++-.|-.+..+-
T Consensus 295 ~~A------gi~~~dId~ie~hgtgt~~~ 317 (421)
T PTZ00050 295 DGA------NININDVDYVNAHATSTPIG 317 (421)
T ss_pred hcc------CCChhhCCEEECCCccCCCC
Confidence 5 5 69999999999996665443
No 99
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=98.89 E-value=1.2e-08 Score=100.75 Aligned_cols=96 Identities=9% Similarity=0.047 Sum_probs=80.6
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHH
Q 018518 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVN 133 (354)
Q Consensus 54 ~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~ 133 (354)
+.+..+|+.+|++++|+++|+++++||.+|+++.......+..+..+...+|+ +..++++.++.+|+++..++..|..
T Consensus 22 ~~~~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl--~~~~p~~~v~~~caSg~~av~~Aa~ 99 (394)
T PLN02644 22 SLSATELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGL--PPSTICTTVNKVCASGMKAVMLAAQ 99 (394)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCC--CCCCceEEEeccchHHHHHHHHHHH
Confidence 46789999999999999999999999999987643222123345568888999 4568888899999999999999999
Q ss_pred HHHhCCCCCCEEEEEEeecc
Q 018518 134 WVESASWDGRYGLVVCTDSA 153 (354)
Q Consensus 134 ~l~sg~~~~~~vLVV~~e~~ 153 (354)
.|++|.+ +.+|+++.|.+
T Consensus 100 ~I~sG~~--d~vlv~G~E~~ 117 (394)
T PLN02644 100 SIQLGIN--DVVVAGGMESM 117 (394)
T ss_pred HHHcCCC--CEEEEEeEEec
Confidence 9999977 99999999877
No 100
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=98.88 E-value=6e-09 Score=102.61 Aligned_cols=97 Identities=10% Similarity=0.140 Sum_probs=83.9
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHH
Q 018518 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVN 133 (354)
Q Consensus 54 ~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~ 133 (354)
+..+.+|+.+|++++|+++|++|++||.+++++..+....+..+..+...+|+ +..++++.|+.+|++++.|+..|..
T Consensus 24 ~~~~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl--~~~~p~~~V~~~CaSG~~Ai~~A~~ 101 (392)
T PRK06633 24 TTPAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGI--PKEVPGYTINKVCGSGLKSVALAAN 101 (392)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCC--CCCccchhhcchhHHHHHHHHHHHH
Confidence 45788999999999999999999999999998765433234566667788999 4469999999999999999999999
Q ss_pred HHHhCCCCCCEEEEEEeeccc
Q 018518 134 WVESASWDGRYGLVVCTDSAV 154 (354)
Q Consensus 134 ~l~sg~~~~~~vLVV~~e~~~ 154 (354)
.|++|.+ +.+|+++.|+++
T Consensus 102 ~I~sG~~--dvvla~G~E~ms 120 (392)
T PRK06633 102 SIMTGDN--EIVIAGGQENMS 120 (392)
T ss_pred HHHcCCC--CEEEEcccccCC
Confidence 9999977 999999999874
No 101
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=98.87 E-value=1.4e-08 Score=101.43 Aligned_cols=98 Identities=13% Similarity=0.093 Sum_probs=80.4
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCC--cCEEEEecccCCC--CCCCHHHHHHHHhcCc----CCCCeeEEeecCcChhHH
Q 018518 54 VEDVISMSLTVVTSLLEKYKIDPTQ--IGRLEVGSETVID--KSKSIKTFLMQIFEKY----GNTDIEGVDSTNACYGGT 125 (354)
Q Consensus 54 ~e~~~~La~~Aa~~aL~~ag~~~~d--Id~li~~t~t~~~--~~P~~a~~l~~~Lgl~----g~~~~~~~di~~~C~g~~ 125 (354)
+.+..+|+.+|++++|+++|++++| ||.+|+++..+.. ..+..+..+...+|+. |-..++++.++.+|++++
T Consensus 45 ~~s~~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~~a~~~~~~~gl~~~~~gl~~~p~~~V~~~caSG~ 124 (438)
T PTZ00455 45 NKTLEELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYKPAMRVEGACASGG 124 (438)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccchHHHHHHhccCcccccccCCCceeEEECcCHHHH
Confidence 4578899999999999999999999 9999988753322 2345566677666551 005688999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCEEEEEEeecc
Q 018518 126 AALFNCVNWVESASWDGRYGLVVCTDSA 153 (354)
Q Consensus 126 ~aL~~A~~~l~sg~~~~~~vLVV~~e~~ 153 (354)
.|+..|...|++|.+ +.|||+++|++
T Consensus 125 ~Ai~~A~~~I~sG~~--dvvlv~G~E~m 150 (438)
T PTZ00455 125 LAVQSAWEALLAGTS--DIALVVGVEVQ 150 (438)
T ss_pred HHHHHHHHHHHCCCC--CEEEEEEEeec
Confidence 999999999999977 99999999986
No 102
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=98.87 E-value=1e-08 Score=101.29 Aligned_cols=97 Identities=8% Similarity=0.108 Sum_probs=84.5
Q ss_pred CCCHHHHHHHHHHHHHHH-cCCCcCCcCEEEEecccCCCC-CCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHH
Q 018518 54 VEDVISMSLTVVTSLLEK-YKIDPTQIGRLEVGSETVIDK-SKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNC 131 (354)
Q Consensus 54 ~e~~~~La~~Aa~~aL~~-ag~~~~dId~li~~t~t~~~~-~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A 131 (354)
+.++.+|+.+|++++|++ +|++|++||.+|+++..+... .+..+..+...+|+ +.+++++.|+++|+++..|+..|
T Consensus 23 ~~~~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl--~~~vP~~tV~~aCaSG~~Ai~~A 100 (401)
T PRK09050 23 SVRADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGL--PVSVPGTTINRLCGSGMDAVGTA 100 (401)
T ss_pred CCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCC--CCCCceEEEecccccHHHHHHHH
Confidence 457789999999999995 799999999999987653222 25677778899999 55699999999999999999999
Q ss_pred HHHHHhCCCCCCEEEEEEeeccc
Q 018518 132 VNWVESASWDGRYGLVVCTDSAV 154 (354)
Q Consensus 132 ~~~l~sg~~~~~~vLVV~~e~~~ 154 (354)
...|++|.+ +.+|+++.|+++
T Consensus 101 ~~~I~sG~~--dvvlagGvEsmS 121 (401)
T PRK09050 101 ARAIKAGEA--ELMIAGGVESMS 121 (401)
T ss_pred HHHHHCCCC--CEEEEecccccc
Confidence 999999977 999999999983
No 103
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=98.87 E-value=9.1e-09 Score=102.56 Aligned_cols=97 Identities=20% Similarity=0.242 Sum_probs=80.9
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHH
Q 018518 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVN 133 (354)
Q Consensus 54 ~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~ 133 (354)
+.+..+|+.+|++++|+++|++|++||.+|+++..+....+.++..+.-..|+ +..++++.|+++|++++.|+..|..
T Consensus 28 ~~~~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl--~~~~p~~~V~~~CaSG~~A~~~a~~ 105 (430)
T TIGR02446 28 GIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGM--NVHTDAYSVTRACATSFQSAVNVAE 105 (430)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCC--CCCCchhhhhhhhhHHHHHHHHHHH
Confidence 45789999999999999999999999999998765432223344444444688 4479999999999999999999999
Q ss_pred HHHhCCCCCCEEEEEEeeccc
Q 018518 134 WVESASWDGRYGLVVCTDSAV 154 (354)
Q Consensus 134 ~l~sg~~~~~~vLVV~~e~~~ 154 (354)
.|++|.+ +.+|+++.|+++
T Consensus 106 ~I~sG~~--dvvla~G~E~mS 124 (430)
T TIGR02446 106 SIMAGAI--DIGIAGGADSSS 124 (430)
T ss_pred HHHCCCC--CEEEEeeeEccc
Confidence 9999977 999999999984
No 104
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=98.85 E-value=1.5e-08 Score=100.07 Aligned_cols=96 Identities=11% Similarity=0.130 Sum_probs=84.3
Q ss_pred CCHHHHHHHHHHHHHHH-cCCCcCCcCEEEEecccCCCC-CCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHH
Q 018518 55 EDVISMSLTVVTSLLEK-YKIDPTQIGRLEVGSETVIDK-SKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCV 132 (354)
Q Consensus 55 e~~~~La~~Aa~~aL~~-ag~~~~dId~li~~t~t~~~~-~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~ 132 (354)
.++.+|+.+|++++|++ +|++|++||.+|+++..+... .+.++..+...+|+ +.+++++-|+++|++++.|+..|.
T Consensus 24 ~~~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl--~~~vp~~tV~~~CaSG~~Av~~A~ 101 (400)
T PRK13359 24 VRADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGL--PHGVPGSTINRLCGSGMDAVGVAA 101 (400)
T ss_pred CCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCC--CCCCceEEEeccchhHHHHHHHHH
Confidence 46789999999999997 599999999999987654322 26788889999999 556999999999999999999999
Q ss_pred HHHHhCCCCCCEEEEEEeeccc
Q 018518 133 NWVESASWDGRYGLVVCTDSAV 154 (354)
Q Consensus 133 ~~l~sg~~~~~~vLVV~~e~~~ 154 (354)
+.|++|.+ +.+|+++.|.++
T Consensus 102 ~~I~sG~~--divlagGvEsmS 121 (400)
T PRK13359 102 RAIKSGEA--ALMIAGGVESMS 121 (400)
T ss_pred HHHHcCCC--CEEEEeeeeccC
Confidence 99999977 999999999983
No 105
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.83 E-value=8.2e-08 Score=95.16 Aligned_cols=222 Identities=11% Similarity=0.041 Sum_probs=130.4
Q ss_pred cceEEeEEEEEcCCccccHHHHHHhh--CCC-----cchh-eeccccEEEe-ecC--------C-----CCCHHHHHHHH
Q 018518 7 KNVGILALDIYFPPTCVLQEALEVHD--GVS-----KGKY-TVGLGQDCMA-FCS--------E-----VEDVISMSLTV 64 (354)
Q Consensus 7 ~~v~I~~ig~~lP~~~v~~e~l~~~~--~~~-----~~~~-~~gig~r~~~-~~~--------~-----~e~~~~La~~A 64 (354)
.+|.|+|+|...|--. +.+++.+.+ |.+ ++|- ..+...+.-. +.+ + -.....|+..|
T Consensus 2 ~~VvITG~g~vtp~G~-~~~~~~~~L~~g~s~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~r~~~~~~~~al~a 80 (405)
T PRK09116 2 RRVVVTGMGGVTALGE-DWQTIAARLKAGRNAVRRMPEWDRYDGLNTRLAAPIDDFELPAHYTRKKIRSMGRVSLMATRA 80 (405)
T ss_pred CCEEEEeeEEECCCCC-CHHHHHHHHHcCCCCEEeCCchhhccCCCCceEEEecCcChhHhcCHHHHhhCCHHHHHHHHH
Confidence 3799999999999873 666666543 211 1110 0011100000 100 0 01234689999
Q ss_pred HHHHHHHcCCCc------CCcCEEEEecccCCC-------------------------CCCC-HHHHHHHHhcCcCCCCe
Q 018518 65 VTSLLEKYKIDP------TQIGRLEVGSETVID-------------------------KSKS-IKTFLMQIFEKYGNTDI 112 (354)
Q Consensus 65 a~~aL~~ag~~~------~dId~li~~t~t~~~-------------------------~~P~-~a~~l~~~Lgl~g~~~~ 112 (354)
+++||+++|+.. +.+ .++++|..+.. .+|. .+..|...+|+.|
T Consensus 81 a~~Al~dAGl~~~~~~~~~r~-Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~G---- 155 (405)
T PRK09116 81 SELALEDAGLLGDPILTDGRM-GIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFGLKG---- 155 (405)
T ss_pred HHHHHHHcCCCCccccCCCcE-EEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhCCCC----
Confidence 999999999842 223 45566543210 1122 5677888999843
Q ss_pred eEEeecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeeccc------------c---C--C----C-----CCCccccc
Q 018518 113 EGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV------------Y---A--E----G-----PARPTGGA 166 (354)
Q Consensus 113 ~~~di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~~------------~---~--~----~-----~~~~lfGD 166 (354)
+.+-+..+|++++.||..|..+|++|.+ +.+||.++|... . . + + ...+++|+
T Consensus 156 p~~ti~~acas~~~Al~~A~~~I~~G~~--d~~lvgg~d~~~~~~~~~f~~l~~~~~~~~~~~~~~rPfd~~~~G~v~gE 233 (405)
T PRK09116 156 RVIPTSSACTSGSQGIGYAYEAIKYGYQ--TVMLAGGAEELCPTEAAVFDTLFATSTRNDAPELTPRPFDANRDGLVIGE 233 (405)
T ss_pred CcccccchhhhHHHHHHHHHHHHHcCCC--CEEEEecchhcChHHHHHHHHhhhhccCCCCCCCCCCCCcCCCCCEeeec
Confidence 3577889999999999999999999977 999999988631 0 0 0 1 13477899
Q ss_pred eeEEEEEccCCC-----ceeeecceeeccc-ccccccccCCCCccccccCcchHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 018518 167 AAVAMLIGPDAP-----IAFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQF 240 (354)
Q Consensus 167 GAaA~lL~~~~~-----~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~ 240 (354)
||+++||++.+. ..+.....+.... +...+..| + ......+++..++.+ |+
T Consensus 234 Ga~~~vLe~~~~A~~rga~i~a~i~g~~~~~d~~~~~~p---------~--------~~~~~~ai~~AL~~A------gi 290 (405)
T PRK09116 234 GAGTLVLEELEHAKARGATIYAEIVGFGTNSDGAHVTQP---------Q--------AETMQIAMELALKDA------GL 290 (405)
T ss_pred cEEEEEEccHHHHHhCCCceEEEEEEEEEcCCCCcCCCC---------C--------HHHHHHHHHHHHHHh------CC
Confidence 999999986421 1111000111100 00111111 1 122345556666665 69
Q ss_pred CccCcceeeccccchHHHH
Q 018518 241 SMLDVDYFVFHSPYNKLVQ 259 (354)
Q Consensus 241 ~~~did~~v~Hq~n~~i~~ 259 (354)
+++|||++.+|-.+...-+
T Consensus 291 ~p~dId~I~~Hgtgt~~~D 309 (405)
T PRK09116 291 APEDIGYVNAHGTATDRGD 309 (405)
T ss_pred CHHHcCEEECcCccCCCCC
Confidence 9999999999976554433
No 106
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=98.82 E-value=2e-08 Score=99.19 Aligned_cols=97 Identities=10% Similarity=0.124 Sum_probs=84.1
Q ss_pred CCCHHHHHHHHHHHHHHH-cCCCcCCcCEEEEecccCCCC-CCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHH
Q 018518 54 VEDVISMSLTVVTSLLEK-YKIDPTQIGRLEVGSETVIDK-SKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNC 131 (354)
Q Consensus 54 ~e~~~~La~~Aa~~aL~~-ag~~~~dId~li~~t~t~~~~-~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A 131 (354)
+.++.+|+.+|++.+|++ +|++|++||.+|+++..+... .+..+..+...+|+ +.+++++.|+++|++++.|+..|
T Consensus 22 ~~~~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl--~~~~p~~~V~~~CaSG~~Ai~~a 99 (400)
T TIGR02430 22 SVRADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGL--PVSVPGTTVNRLCGSGLDAIGMA 99 (400)
T ss_pred CCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCC--CCCCceEEeechhhhHHHHHHHH
Confidence 456789999999999995 699999999999987653221 25677779999999 44699999999999999999999
Q ss_pred HHHHHhCCCCCCEEEEEEeeccc
Q 018518 132 VNWVESASWDGRYGLVVCTDSAV 154 (354)
Q Consensus 132 ~~~l~sg~~~~~~vLVV~~e~~~ 154 (354)
...|++|.+ +.+|+++.|+++
T Consensus 100 ~~~I~sG~~--d~~la~G~E~ms 120 (400)
T TIGR02430 100 ARAIKAGEA--DLLIAGGVESMS 120 (400)
T ss_pred HHHHHCCCC--CEEEEecccccc
Confidence 999999977 999999999983
No 107
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=98.81 E-value=2.9e-08 Score=97.82 Aligned_cols=97 Identities=13% Similarity=0.170 Sum_probs=78.9
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCC-CCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHH
Q 018518 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDK-SKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCV 132 (354)
Q Consensus 54 ~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~-~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~ 132 (354)
+.+..+|+.+|++++|+++|+++++||.+|+++..+... .+..+....-..|+ +.+++++-|+.+|++++.|+..|.
T Consensus 23 ~~~~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl--~~~vP~~tV~~~CaSG~~Ai~~A~ 100 (390)
T PRK06504 23 GWHPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKL--PESVPGTSIDRQCGSSQQALHFAA 100 (390)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCC--CCCCceEEEechhhHHHHHHHHHH
Confidence 456899999999999999999999999999987653211 13343332223377 457899999999999999999999
Q ss_pred HHHHhCCCCCCEEEEEEeeccc
Q 018518 133 NWVESASWDGRYGLVVCTDSAV 154 (354)
Q Consensus 133 ~~l~sg~~~~~~vLVV~~e~~~ 154 (354)
+.|++|.+ +.+|+++.|+++
T Consensus 101 ~~I~sG~~--dvvLagGvEsmS 120 (390)
T PRK06504 101 QAVMSGTM--DIVIAAGVESMT 120 (390)
T ss_pred HHHHCCCC--CEEEEeeeeecC
Confidence 99999977 999999999983
No 108
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=98.80 E-value=8e-08 Score=98.14 Aligned_cols=226 Identities=16% Similarity=0.156 Sum_probs=133.4
Q ss_pred cceEEeEEEEEcCCccccHHHHHHhh--CC---C-cchh-----eecc-c-cEEEe---ecCC-----CCCHHHHHHHHH
Q 018518 7 KNVGILALDIYFPPTCVLQEALEVHD--GV---S-KGKY-----TVGL-G-QDCMA---FCSE-----VEDVISMSLTVV 65 (354)
Q Consensus 7 ~~v~I~~ig~~lP~~~v~~e~l~~~~--~~---~-~~~~-----~~gi-g-~r~~~---~~~~-----~e~~~~La~~Aa 65 (354)
++|.|+|+|...|-- .+.+++.+.+ |. . .+++ ...+ | .+.+. +..+ -.....++..|+
T Consensus 129 ~rVvITG~G~vtp~G-~~~~~~w~~L~~G~s~i~~~~~f~~~~~~~~~ag~i~~f~~~~~l~~k~~r~md~~~~~al~Aa 207 (540)
T PLN02787 129 RRVVVTGMGVVSPLG-HDPDVFYNNLLEGVSGISEIERFDCSQFPTRIAGEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 207 (540)
T ss_pred CCEEEEeeEEECCCC-CCHHHHHHHHHcCCCcccccCccchhhCCccccccccccChhhcCCHHHHHhCCHHHHHHHHHH
Confidence 479999999999987 4667766543 21 1 1111 1111 1 00000 0000 011345888999
Q ss_pred HHHHHHcCCCcCC---cC----EEEEecccCCC--------------------CCC-----CHHHHHHHHhcCcCCCCee
Q 018518 66 TSLLEKYKIDPTQ---IG----RLEVGSETVID--------------------KSK-----SIKTFLMQIFEKYGNTDIE 113 (354)
Q Consensus 66 ~~aL~~ag~~~~d---Id----~li~~t~t~~~--------------------~~P-----~~a~~l~~~Lgl~g~~~~~ 113 (354)
++||+++|++++. ++ .|+++|..+.. ..| ..+.+|...+|+.| +
T Consensus 208 ~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~~gl~G----p 283 (540)
T PLN02787 208 KKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDLGWMG----P 283 (540)
T ss_pred HHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHHhCCCC----C
Confidence 9999999997642 21 45666653210 011 13567888899833 3
Q ss_pred EEeecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeecc-c------------c---CC------C-----CCCccccc
Q 018518 114 GVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA-V------------Y---AE------G-----PARPTGGA 166 (354)
Q Consensus 114 ~~di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~-~------------~---~~------~-----~~~~lfGD 166 (354)
.+-+..+|+++.+||..|.++|++|.+ +.+||.++|.. . . .+ + ...+++|+
T Consensus 284 ~~tistACASs~~Ai~~A~~~Ir~G~a--D~aLvGG~d~~l~p~~~~~f~~~~aLS~~~~~p~~~~rPFD~~rdGfv~GE 361 (540)
T PLN02787 284 NYSISTACATSNFCILNAANHIIRGEA--DVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRPWDMNRDGFVMGE 361 (540)
T ss_pred ccccccccccHHHHHHHHHHHHHcCCC--CEEEEeccccccCHHHHHHHHHHHHhhccCCCcccccCCcccCCCCccccc
Confidence 577889999999999999999999977 99999999952 0 0 00 1 13578999
Q ss_pred eeEEEEEccCCC-----ceeeecceeec-ccccccccccCCCCccccccCcchHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 018518 167 AAVAMLIGPDAP-----IAFESKLRGSH-MSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQF 240 (354)
Q Consensus 167 GAaA~lL~~~~~-----~~~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~ 240 (354)
||+++||++.+. ..+.....+.. ..+......| .-+|.. +..+++..++.+ |+
T Consensus 362 GAa~lVLE~~e~A~~rGa~IyA~I~G~g~s~Da~~~t~p-------~p~g~g--------~~~am~~AL~~A------Gl 420 (540)
T PLN02787 362 GAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEP-------HPEGAG--------VILCIEKALAQS------GV 420 (540)
T ss_pred ceEEEEEeeHHHHHHCCCeeEEEEEEEEEecCCCCCCCC-------CcCHHH--------HHHHHHHHHHHc------CC
Confidence 999999996431 11111011111 1111111222 122221 233445555554 69
Q ss_pred CccCcceeeccccchHHHHH
Q 018518 241 SMLDVDYFVFHSPYNKLVQK 260 (354)
Q Consensus 241 ~~~did~~v~Hq~n~~i~~~ 260 (354)
+++||||+-.|-.+...-+.
T Consensus 421 ~p~dIdyInaHGTGT~~gD~ 440 (540)
T PLN02787 421 SKEDVNYINAHATSTKAGDL 440 (540)
T ss_pred CHHHCcEEEccCccCCCCCH
Confidence 99999999999876655443
No 109
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=98.77 E-value=2.5e-07 Score=91.63 Aligned_cols=223 Identities=14% Similarity=0.097 Sum_probs=131.8
Q ss_pred ceEEeEEEEEcCCccccHHHHHHhh--CCC----cchhe-ec----c-cc-EEE----eecC----CCCCHHHHHHHHHH
Q 018518 8 NVGILALDIYFPPTCVLQEALEVHD--GVS----KGKYT-VG----L-GQ-DCM----AFCS----EVEDVISMSLTVVT 66 (354)
Q Consensus 8 ~v~I~~ig~~lP~~~v~~e~l~~~~--~~~----~~~~~-~g----i-g~-r~~----~~~~----~~e~~~~La~~Aa~ 66 (354)
+|.|+|+|...|--. +.+++.+.+ |.+ .+++. .+ + +. ..+ .+.. .......|+..|+.
T Consensus 2 ~VvItG~G~vsp~G~-~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~d~~~~~~l~aa~ 80 (399)
T cd00832 2 RAVVTGIGVVAPNGL-GVEEYWKAVLDGRSGLGPITRFDPSGYPARLAGEVPDFDAAEHLPGRLLPQTDRMTRLALAAAD 80 (399)
T ss_pred CEEEEeeEEeCCCCC-CHHHHHHHHHhCCCeEeeCCccccccCCCceeEEeCCcChhhcCCHHHHhhCCHHHHHHHHHHH
Confidence 689999999999763 566666543 221 11111 00 0 00 000 0000 00123468999999
Q ss_pred HHHHHcCCCcCCcC----EEEEecccCCC-----------------CCC---------CHHHHHHHHhcCcCCCCeeEEe
Q 018518 67 SLLEKYKIDPTQIG----RLEVGSETVID-----------------KSK---------SIKTFLMQIFEKYGNTDIEGVD 116 (354)
Q Consensus 67 ~aL~~ag~~~~dId----~li~~t~t~~~-----------------~~P---------~~a~~l~~~Lgl~g~~~~~~~d 116 (354)
+||+++|+++++++ .|+++|..+.+ ..| ..+..|...+|+.| +++-
T Consensus 81 eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~G----p~~t 156 (399)
T cd00832 81 WALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGMRG----PSGV 156 (399)
T ss_pred HHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhCCCC----Cccc
Confidence 99999999876543 35666654321 001 24567888899833 3566
Q ss_pred ecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeecc-c------------c--CC-----------CCCCccccceeEE
Q 018518 117 STNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA-V------------Y--AE-----------GPARPTGGAAAVA 170 (354)
Q Consensus 117 i~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~-~------------~--~~-----------~~~~~lfGDGAaA 170 (354)
+..+|++++.||..|..+|++| . +.+|+.++|.. . . .+ +...++.|+||++
T Consensus 157 i~~acaS~~~Al~~A~~~i~~G--~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~~~~p~~~~rPFd~~~~G~~~gEGa~~ 233 (399)
T cd00832 157 VVAEQAGGLDALAQARRLVRRG--T-PLVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDAAAAGYVPGEGGAI 233 (399)
T ss_pred ccchhHHHHHHHHHHHHHHHcC--C-CeEEEEeeccccCHHHHHHHHhccccCCCCCCCCCcCCCcCCCCCEeeeceEEE
Confidence 7899999999999999999999 6 78888888863 1 0 00 1134788999999
Q ss_pred EEEccCCC-----ceeeecceeecccccccccccCCCCccccccCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccCc
Q 018518 171 MLIGPDAP-----IAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDV 245 (354)
Q Consensus 171 ~lL~~~~~-----~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~di 245 (354)
+||++.+. ..+.....+.. ...+ + .. +.. .......+++..++.+ |++++||
T Consensus 234 lvLe~~~~A~~rg~~i~a~i~g~~-~~~d----~---~~---~~~------~~~~~~~a~~~al~~a------g~~~~~i 290 (399)
T cd00832 234 LVLEDAAAARERGARVYGEIAGYA-ATFD----P---PP---GSG------RPPGLARAIRLALADA------GLTPEDV 290 (399)
T ss_pred EEEeeHHHHHHCCCeEEEEEEeEE-EcCC----C---CC---CCC------CHHHHHHHHHHHHHHc------CCCHHHc
Confidence 99987532 11111011111 1000 0 00 000 0222344555556554 6999999
Q ss_pred ceeeccccchHHHHHH
Q 018518 246 DYFVFHSPYNKLVQKS 261 (354)
Q Consensus 246 d~~v~Hq~n~~i~~~~ 261 (354)
||+..|-.+....+..
T Consensus 291 ~~v~~hgtgt~~~D~~ 306 (399)
T cd00832 291 DVVFADAAGVPELDRA 306 (399)
T ss_pred cEEEeccCcCCCCCHH
Confidence 9999998766554444
No 110
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=98.76 E-value=5e-08 Score=96.08 Aligned_cols=103 Identities=7% Similarity=-0.040 Sum_probs=81.4
Q ss_pred eeccccEEEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecC
Q 018518 40 TVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTN 119 (354)
Q Consensus 40 ~~gig~r~~~~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~ 119 (354)
..|+|...+... ++.+..+|+.+|+++||+++|++++|||.+++.+..+. .....+++.||+ ...+...+..
T Consensus 9 IvG~g~t~~~~~-~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~~~----~~~~~~~~~lGl---~~~~~~~v~~ 80 (388)
T PRK08142 9 IVGAYEHPTRKA-PDKSVAQLHAEVAKGALADAGLSLADVDGYFCAGDAPG----LGPASMVDYLGL---KLRHVDSTET 80 (388)
T ss_pred EEEEeeccceeC-CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCCC----ccHHHHHHhCCC---CCeeeccccC
Confidence 356666654332 45678999999999999999999999999875322211 112458899999 4467778889
Q ss_pred cChhHHHHHHHHHHHHHhCCCCCCEEEEEEeec
Q 018518 120 ACYGGTAALFNCVNWVESASWDGRYGLVVCTDS 152 (354)
Q Consensus 120 ~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~ 152 (354)
+|+++..++..|...|++|.+ +.||||+.|+
T Consensus 81 gg~s~~~a~~~A~~~I~sG~~--d~vLvvg~e~ 111 (388)
T PRK08142 81 GGSSYLAHVGHAAQAIAAGKC--SVALITLAGR 111 (388)
T ss_pred CcHHHHHHHHHHHHHHHcCCC--CEEEEEeeee
Confidence 999999999999999999987 9999999885
No 111
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=98.76 E-value=1.8e-07 Score=90.59 Aligned_cols=177 Identities=12% Similarity=-0.007 Sum_probs=111.3
Q ss_pred HHHHHHHHHHHHHHHcCC--CcCCcCEEEEecccCCC-----------------CCC---------CHHHHHHHHhcCcC
Q 018518 57 VISMSLTVVTSLLEKYKI--DPTQIGRLEVGSETVID-----------------KSK---------SIKTFLMQIFEKYG 108 (354)
Q Consensus 57 ~~~La~~Aa~~aL~~ag~--~~~dId~li~~t~t~~~-----------------~~P---------~~a~~l~~~Lgl~g 108 (354)
...++..|++++|+++|+ ++++++.++ +|..+.. ..| ..+.+|...+|+.|
T Consensus 4 ~~~~~~~a~~~a~~~a~~~~~~~r~Gv~~-G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l~G 82 (342)
T PRK14691 4 WWRYKWITFHPSLTHADNTEKQERTATII-GAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFKG 82 (342)
T ss_pred HHHHHHHHHHHHHHhCCCCCCcccEEEEE-ecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCCCC
Confidence 356889999999999996 566776655 4432221 011 25677888888843
Q ss_pred CCCeeEEeecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeecc-c------------c----CC------C-----CC
Q 018518 109 NTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA-V------------Y----AE------G-----PA 160 (354)
Q Consensus 109 ~~~~~~~di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~-~------------~----~~------~-----~~ 160 (354)
+.+-+..+|++++.||..|.++|+.|.+ +.+||.++|.. . . .+ + ..
T Consensus 83 ----p~~ti~~aCaSg~~Al~~A~~~I~~G~~--d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~ 156 (342)
T PRK14691 83 ----PIGAPVTACAAGVQAIGDAVRMIRNNEA--DVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTARD 156 (342)
T ss_pred ----CccccccHhHHHHHHHHHHHHHHHcCCC--CEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCCCC
Confidence 3567789999999999999999999977 89999998863 1 1 10 0 13
Q ss_pred CccccceeEEEEEccCCC-----ceeeecceeeccc-ccccccccCCCCccccccCcchHHHHHHHHHHHHHHHHHHHHh
Q 018518 161 RPTGGAAAVAMLIGPDAP-----IAFESKLRGSHMS-HAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEK 234 (354)
Q Consensus 161 ~~lfGDGAaA~lL~~~~~-----~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~G~~~~~~~~~~~~~~~~~~l~~~~~ 234 (354)
.+++||||+++||+..+. ..+.....+.... +......| ..+ ......+++..++++
T Consensus 157 G~v~gEGAa~lvLes~~~A~~rG~~i~a~I~g~~~~~d~~~~~~p-------~p~--------~~~~~~ai~~AL~~A-- 219 (342)
T PRK14691 157 GFVMGEGAGLLIIEELEHALARGAKPLAEIVGYGTSADAYHMTSG-------AED--------GDGAYRAMKIALRQA-- 219 (342)
T ss_pred CccccceEEEEEEeeHHHHHhCCCCceEEEEEEEEEcCCCCCCCC-------CCC--------HHHHHHHHHHHHHHc--
Confidence 478999999999986531 1110001111100 00000011 011 122334555666665
Q ss_pred hhcCCCCccCcceeeccccchHHHHHH
Q 018518 235 LEGRQFSMLDVDYFVFHSPYNKLVQKS 261 (354)
Q Consensus 235 ~~~~g~~~~did~~v~Hq~n~~i~~~~ 261 (354)
|++++|||++-.|-.+....+.+
T Consensus 220 ----gl~p~dIdyIeaHgtgT~~~D~~ 242 (342)
T PRK14691 220 ----GITPEQVQHLNAHATSTPVGDLG 242 (342)
T ss_pred ----CCCHHHCCEEEecCCCCcCCCHH
Confidence 69999999999998877665444
No 112
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=98.75 E-value=4.1e-08 Score=96.68 Aligned_cols=96 Identities=15% Similarity=0.123 Sum_probs=81.7
Q ss_pred CCCHHHHHHHHHHHHHHH-cCCCcCCcCEEEEecccCCCC-CCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHH
Q 018518 54 VEDVISMSLTVVTSLLEK-YKIDPTQIGRLEVGSETVIDK-SKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNC 131 (354)
Q Consensus 54 ~e~~~~La~~Aa~~aL~~-ag~~~~dId~li~~t~t~~~~-~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A 131 (354)
+....+|+..+++++|++ +|+++++||.+++++..+... .+..+..+...+|+ +..++++.|+++|++++.|+..|
T Consensus 24 ~~~~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl--~~~~p~~~V~~~caSG~~Ai~~A 101 (387)
T PRK08947 24 NVRAEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGI--PHSVPAVTVNRLCGSSMQALHDA 101 (387)
T ss_pred CCCHHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCC--CCCCcceeeechhHHHHHHHHHH
Confidence 456789999999999996 799999999999987643222 24456667888898 44699999999999999999999
Q ss_pred HHHHHhCCCCCCEEEEEEeecc
Q 018518 132 VNWVESASWDGRYGLVVCTDSA 153 (354)
Q Consensus 132 ~~~l~sg~~~~~~vLVV~~e~~ 153 (354)
...|++|.+ +.+|+++.|.+
T Consensus 102 ~~~I~sG~~--d~vlv~G~E~m 121 (387)
T PRK08947 102 ARAIMTGDG--DVFLIGGVEHM 121 (387)
T ss_pred HHHHHCCCC--CEEEEcccccc
Confidence 999999977 99999999987
No 113
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.71 E-value=4.5e-07 Score=89.63 Aligned_cols=220 Identities=10% Similarity=0.003 Sum_probs=132.8
Q ss_pred CCcceEEeEEEEEcCCccccHHHHHHhh--CCCc-----ch---heec-ccc---EEEeecC-----CCCCHHHHHHHHH
Q 018518 5 HPKNVGILALDIYFPPTCVLQEALEVHD--GVSK-----GK---YTVG-LGQ---DCMAFCS-----EVEDVISMSLTVV 65 (354)
Q Consensus 5 ~~~~v~I~~ig~~lP~~~v~~e~l~~~~--~~~~-----~~---~~~g-ig~---r~~~~~~-----~~e~~~~La~~Aa 65 (354)
...+|.|+|+|...|--. +.+++.+.+ |.+. .. +... ++. +. .+.. .-.....|+..|+
T Consensus 4 ~~~rVvITGiG~vsp~G~-~~e~~w~aL~~G~sg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~r~~~r~~~~a~~Aa 81 (398)
T PRK06519 4 QPNDVVITGIGLVSSLGE-GLDAHWNALSAGRPQPNVDTETFAPYPVHPLPEIDWSQ-QIPKRGDQRQMETWQRLGTYAA 81 (398)
T ss_pred CCCCEEEEcceEECCCCC-CHHHHHHHHHcCCCCCCCCcccccCcCcccccccChhh-cCCchhhhhccCHHHHHHHHHH
Confidence 356899999999999864 666665543 2221 00 0000 110 00 0110 0112456899999
Q ss_pred HHHHHHcCCCcC-----CcCEEEEecccCCC-----------------------------CCC---------CHHHHHHH
Q 018518 66 TSLLEKYKIDPT-----QIGRLEVGSETVID-----------------------------KSK---------SIKTFLMQ 102 (354)
Q Consensus 66 ~~aL~~ag~~~~-----dId~li~~t~t~~~-----------------------------~~P---------~~a~~l~~ 102 (354)
++||+++|+++. +++.+ ++|..+.. ..| ..+..|..
T Consensus 82 ~~Al~dAGl~~~~~~~~r~Gvi-vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~ 160 (398)
T PRK06519 82 GLALDDAGIKGNEELLSTMDMI-VAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLSNLLAGNISI 160 (398)
T ss_pred HHHHHHcCCCCCCCCccceEEE-EEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhhhHHHHHHHH
Confidence 999999998543 34344 44543321 011 24566888
Q ss_pred HhcCcCCCCeeEEeecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeecc-c------------cC--------CC---
Q 018518 103 IFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA-V------------YA--------EG--- 158 (354)
Q Consensus 103 ~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~-~------------~~--------~~--- 158 (354)
.+|+.| +.+-+..+|++++.||..|..+|++|++ +.+||.++|.. . +. ++
T Consensus 161 ~~gl~G----p~~ti~~acaSg~~Ai~~A~~~I~~G~~--d~~lvGG~d~~~~~~~~~~~~~~~~ls~~~~~p~~d~~~~ 234 (398)
T PRK06519 161 VHKVTG----SSRTFMGEESAGVSAIEIAFARIASGQS--DHALVGGAYNAERPDMLLLYELGGLLLKGGWAPVWSRGGE 234 (398)
T ss_pred HhCCCC----ccccccCCccHHHHHHHHHHHHHHcCCC--CEEEEeeeccccCHHHHHHHHHcCccCCCCCCchhccCcc
Confidence 899843 4577889999999999999999999977 99999999862 1 00 11
Q ss_pred -CCCccccceeEEEEEccCCC-----ceeeecceeecccccccccccCCCCccccccCcchHHHHHHHHHHHHHHHHHHH
Q 018518 159 -PARPTGGAAAVAMLIGPDAP-----IAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKF 232 (354)
Q Consensus 159 -~~~~lfGDGAaA~lL~~~~~-----~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~G~~~~~~~~~~~~~~~~~~l~~~ 232 (354)
..-++.|+||+++||++.+. ..+.....+. +.+. . + . .+ ..+..+++..++.+
T Consensus 235 ~r~G~v~GEGAa~lvLE~~~~A~~Rga~i~AeI~G~-~~d~---~-~-------~-~~--------~~~~~am~~AL~~A 293 (398)
T PRK06519 235 DGGGFILGSGGAFLVLESREHAEARGARPYARISGV-ESDR---A-R-------R-AP--------GDLEASLERLLKPA 293 (398)
T ss_pred CCCCeeeeceEEEEEEeeHHHHHhCCCceEEEEEEE-eecC---C-C-------C-Ch--------HHHHHHHHHHHHHC
Confidence 23467899999999997542 1111101122 1110 0 1 0 01 12344566666665
Q ss_pred HhhhcCCCCccCcceeeccccchHHHHHH
Q 018518 233 EKLEGRQFSMLDVDYFVFHSPYNKLVQKS 261 (354)
Q Consensus 233 ~~~~~~g~~~~did~~v~Hq~n~~i~~~~ 261 (354)
|+ ++||||+..|-.+.+..+..
T Consensus 294 ------gl-~~~IdyI~ahgtgT~~~D~~ 315 (398)
T PRK06519 294 ------GG-LAAPTAVISGATGAHPATAE 315 (398)
T ss_pred ------CC-cccCCEEEeCCCCCCCccHH
Confidence 68 79999999998776655444
No 114
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=98.71 E-value=9e-08 Score=95.40 Aligned_cols=97 Identities=12% Similarity=0.130 Sum_probs=78.9
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHH
Q 018518 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVN 133 (354)
Q Consensus 54 ~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~ 133 (354)
+.+..+|+.+|++++|+++|+++++||.+++++..+....+..+..+.-..|+ +...+++.|+.+|++++.++..|..
T Consensus 28 ~~~~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~~~~~~r~~~l~~gl--~~~~p~~~V~~~CaSG~~ai~~A~~ 105 (427)
T PRK09268 28 DASNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTRECVLGSAL--SPYTPAYDLQQACGTGLEAAILVAN 105 (427)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCccccHHHHHHHHcCC--CCCCceeeeechhhHHHHHHHHHHH
Confidence 45788999999999999999999999999998754321123344444344456 3558899999999999999999999
Q ss_pred HHHhCCCCCCEEEEEEeeccc
Q 018518 134 WVESASWDGRYGLVVCTDSAV 154 (354)
Q Consensus 134 ~l~sg~~~~~~vLVV~~e~~~ 154 (354)
.|++|.+ +.+|++++|.++
T Consensus 106 ~I~sG~~--d~vlvgG~E~ms 124 (427)
T PRK09268 106 KIALGQI--DSGIAGGVDTTS 124 (427)
T ss_pred HHHCCCC--CEEEEeeEEccC
Confidence 9999977 999999999873
No 115
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=98.70 E-value=5e-08 Score=96.00 Aligned_cols=96 Identities=15% Similarity=0.141 Sum_probs=79.3
Q ss_pred CCCHHHHHHHHHHHHHHH-cCCCcCCcCEEEEecccCCCC-CCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHH
Q 018518 54 VEDVISMSLTVVTSLLEK-YKIDPTQIGRLEVGSETVIDK-SKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNC 131 (354)
Q Consensus 54 ~e~~~~La~~Aa~~aL~~-ag~~~~dId~li~~t~t~~~~-~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A 131 (354)
+.++.+|+.+|++.+|++ +|++|++||.+++++...... .+.++..+....|+ +..++++.|+.+|++++.|+..|
T Consensus 22 ~~~~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~--~~~~p~~tV~~~CaSG~~Ai~~A 99 (385)
T TIGR02445 22 NTRAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQI--PHTSAAVTVNRLCGSSMQALHDA 99 (385)
T ss_pred CCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCC--CCCcchhhhhhhhHHHHHHHHHH
Confidence 456789999999999996 599999999999987642211 23355555556677 45689999999999999999999
Q ss_pred HHHHHhCCCCCCEEEEEEeecc
Q 018518 132 VNWVESASWDGRYGLVVCTDSA 153 (354)
Q Consensus 132 ~~~l~sg~~~~~~vLVV~~e~~ 153 (354)
...|++|.+ +.+|+++.|.+
T Consensus 100 a~~I~sG~~--d~vlagG~E~m 119 (385)
T TIGR02445 100 ARAIMTGDA--DVCLVGGVEHM 119 (385)
T ss_pred HHHHHCCCC--CEEEEeeehhc
Confidence 999999976 99999999987
No 116
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=98.66 E-value=1.1e-07 Score=93.49 Aligned_cols=95 Identities=15% Similarity=0.180 Sum_probs=74.6
Q ss_pred CCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCC-CCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHH
Q 018518 55 EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVID-KSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVN 133 (354)
Q Consensus 55 e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~-~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~ 133 (354)
.+..+|+.+|++++|+++|++++|||.+++++..... ..+..+....-.+|+ +..++++.++.+|++++.++..|..
T Consensus 24 ~~~~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl--~~~~p~~~v~~acaSg~~Av~~Aa~ 101 (382)
T PRK07801 24 VHPADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGL--PEEVPGVTVDRQCGSSQQAIHFAAQ 101 (382)
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCC--CCCCceeeecchhhhHHHHHHHHHH
Confidence 5789999999999999999999999999987541111 112223222234666 3457888999999999999999999
Q ss_pred HHHhCCCCCCEEEEEEeecc
Q 018518 134 WVESASWDGRYGLVVCTDSA 153 (354)
Q Consensus 134 ~l~sg~~~~~~vLVV~~e~~ 153 (354)
.|++|.+ +.|||++.|.+
T Consensus 102 ~I~sG~~--d~vLv~G~e~m 119 (382)
T PRK07801 102 AVMSGTQ--DLVVAGGVQNM 119 (382)
T ss_pred HHHCCCC--CEEEEcchhhh
Confidence 9999987 99999989865
No 117
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=98.65 E-value=2.1e-07 Score=94.48 Aligned_cols=107 Identities=11% Similarity=0.051 Sum_probs=83.4
Q ss_pred eccccEEEeecCCC--CCHHHHHHHHHHHHHHHcCCC--cCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEe
Q 018518 41 VGLGQDCMAFCSEV--EDVISMSLTVVTSLLEKYKID--PTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVD 116 (354)
Q Consensus 41 ~gig~r~~~~~~~~--e~~~~La~~Aa~~aL~~ag~~--~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~d 116 (354)
.|+|+..++...++ .+..+|+.+|+++||+++|++ +++||.+++++.... ........++++||+ .......
T Consensus 9 VGvG~t~~~~~~~~~~~s~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~-~~~~~~~~la~~lGl---~p~~~~~ 84 (498)
T PRK08257 9 VGVGQVTERPDDPAYGLEPVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSW-RYRDPPGLLAERLGA---DPARTVY 84 (498)
T ss_pred EEeeecccccCCcccCCCHHHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccc-cccCHHHHHHHHcCC---CCcceeE
Confidence 57777554332223 278899999999999999999 999999998765322 122345789999999 3344455
Q ss_pred ecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeecc
Q 018518 117 STNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA 153 (354)
Q Consensus 117 i~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~ 153 (354)
...||++...++..|...|++|.+ +.|||+++|+.
T Consensus 85 ~~~GG~s~~~~v~~Aa~~IasG~a--dvVLv~G~E~~ 119 (498)
T PRK08257 85 SPVGGNSPQRLVNEAALRIAAGEA--DVALVAGAEAQ 119 (498)
T ss_pred ecCCCHHHHHHHHHHHHHHHCCCC--CEEEEeeeeec
Confidence 667898999999999999999977 99999999985
No 118
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.62 E-value=1.1e-06 Score=87.39 Aligned_cols=226 Identities=12% Similarity=0.082 Sum_probs=130.3
Q ss_pred cceEEeEEEEEcCCccccHHHHHHhh--CCC-----cch-h-----eeccccE-EEee---cCCC-----CCHHHHHHHH
Q 018518 7 KNVGILALDIYFPPTCVLQEALEVHD--GVS-----KGK-Y-----TVGLGQD-CMAF---CSEV-----EDVISMSLTV 64 (354)
Q Consensus 7 ~~v~I~~ig~~lP~~~v~~e~l~~~~--~~~-----~~~-~-----~~gig~r-~~~~---~~~~-----e~~~~La~~A 64 (354)
++|.|+|+|...|--. +.+++.+.+ |.+ +++ + ...++-. ...+ ..+. ....-|+..|
T Consensus 12 ~~VvItGig~~sp~g~-~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~g~i~~~~d~~~~~~~~~~~d~~~~~~l~a 90 (418)
T PRK07910 12 PNVVVTGIAMTTALAT-DAETTWKLLLDGQSGIRTLDDPFVEEFDLPVRIGGHLLEEFDHQLTRVELRRMSYLQRMSTVL 90 (418)
T ss_pred CCEEEEeeEEECCCCC-CHHHHHHHHHcCCCeeEeCChhhhhccCCCcceEEEeccCccccCCHHHHhhccHHHHHHHHH
Confidence 4799999999999864 677776653 221 111 1 0111100 0000 0000 1123488899
Q ss_pred HHHHHHHcCC---CcCCcCEEEEecccCCC-------------------------CCC-CHHHHHHHHhcCcCCCCeeEE
Q 018518 65 VTSLLEKYKI---DPTQIGRLEVGSETVID-------------------------KSK-SIKTFLMQIFEKYGNTDIEGV 115 (354)
Q Consensus 65 a~~aL~~ag~---~~~dId~li~~t~t~~~-------------------------~~P-~~a~~l~~~Lgl~g~~~~~~~ 115 (354)
+++||+++|+ +++.+..+ ++|..+.. ..| ..+.++...+|+.| +.+
T Consensus 91 a~~AledAg~~~~~~~r~Gv~-~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~G----~~~ 165 (418)
T PRK07910 91 GRRVWENAGSPEVDTNRLMVS-IGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHAKA----GVI 165 (418)
T ss_pred HHHHHHHcCCCCCCcccEEEE-EEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCCCC----Ccc
Confidence 9999999996 45556544 44432210 011 24556777777732 246
Q ss_pred eecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeecc-c-------------cC-----C----C-----CCCccccce
Q 018518 116 DSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA-V-------------YA-----E----G-----PARPTGGAA 167 (354)
Q Consensus 116 di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~-~-------------~~-----~----~-----~~~~lfGDG 167 (354)
.+..+|++++.||..|.++|++|.+ +.+||.++|.. . .. + + ...+++|+|
T Consensus 166 ti~taCaS~~~Al~~A~~~I~~G~~--d~aivgg~~~~~~~~~~~~f~~~~~~ls~~~~~~~~~~rPFd~~~~G~v~gEG 243 (418)
T PRK07910 166 TPVSACASGSEAIAQAWRQIVLGEA--DIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKDRDGFVFGEG 243 (418)
T ss_pred cccchhHHHHHHHHHHHHHHHcCCC--CEEEEccccccCCHHHHHHHHhcCCccccCCCCCCCCcCCCcCCCCCEeeece
Confidence 6789999999999999999999976 99999999863 1 11 0 0 134789999
Q ss_pred eEEEEEccCCC-----ceeeecceeecc-cccccccccCCCCccccccCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 018518 168 AVAMLIGPDAP-----IAFESKLRGSHM-SHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFS 241 (354)
Q Consensus 168 AaA~lL~~~~~-----~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~ 241 (354)
++++||++.+. ..+.....++.. .+......|. ..| .....+++..++.+ |++
T Consensus 244 aa~vvLe~~~~A~~rg~~i~a~i~g~~~~~dg~~~~~~~-------~~~--------~~~~~a~~~Al~~a------gi~ 302 (418)
T PRK07910 244 GALMVIETEEHAKARGANILARIMGASITSDGFHMVAPD-------PNG--------ERAGHAMTRAIELA------GLT 302 (418)
T ss_pred EEEEEEeeHHHHHhCCCcEEEEEEEEEEecCCCCCCCCC-------CCH--------HHHHHHHHHHHHHh------CCC
Confidence 99999987531 111100111110 0111111111 111 12234555666655 699
Q ss_pred ccCcceeeccccchHHHHHH
Q 018518 242 MLDVDYFVFHSPYNKLVQKS 261 (354)
Q Consensus 242 ~~did~~v~Hq~n~~i~~~~ 261 (354)
++|||++-.|-.+.+..+.+
T Consensus 303 ~~did~ie~hgtgt~~~D~~ 322 (418)
T PRK07910 303 PGDIDHVNAHATGTSVGDVA 322 (418)
T ss_pred HHHCCEEEcCCcCCCCCCHH
Confidence 99999999998776654443
No 119
>PRK07855 lipid-transfer protein; Provisional
Probab=98.62 E-value=2.1e-07 Score=91.63 Aligned_cols=100 Identities=9% Similarity=0.007 Sum_probs=77.8
Q ss_pred eccccEEEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCc
Q 018518 41 VGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNA 120 (354)
Q Consensus 41 ~gig~r~~~~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~ 120 (354)
.|+|...+.. .++.+..+|+.+|+++||+++|++++|||.+++.+.. ..+. ..+++.||+ ++..+...+.++
T Consensus 9 vG~g~t~~~r-~~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~---~~~~--~~l~~~lGl--~~~~~~~~v~~g 80 (386)
T PRK07855 9 VGIGATEFSK-NSGRSELRLACEAVLAALDDAGLAPSDVDGLVTFTMD---TNPE--IAVARALGI--GELKFFSRIHYG 80 (386)
T ss_pred EEeeeccccc-CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCc---cccH--HHHHHHCCC--CCCcceeeecCC
Confidence 4566544322 2356788999999999999999999999999874431 2222 568899999 322445678899
Q ss_pred ChhHHHHHHHHHHHHHhCCCCCCEEEEEEe
Q 018518 121 CYGGTAALFNCVNWVESASWDGRYGLVVCT 150 (354)
Q Consensus 121 C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~ 150 (354)
|+++..++..|...|++|.+ +.|||++.
T Consensus 81 g~sg~~~~~~A~~~I~sG~~--d~vLv~g~ 108 (386)
T PRK07855 81 GGAACATVQQAAMAVATGVA--DVVVCYRA 108 (386)
T ss_pred cHHHHHHHHHHHHHHHCCCC--CEEEEEee
Confidence 99999999999999999987 99999877
No 120
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....
Probab=98.61 E-value=2.4e-07 Score=85.46 Aligned_cols=114 Identities=21% Similarity=0.168 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcC-----EEEEecccCCC---------------C--------CC-CHHHHHHHHhcCc
Q 018518 57 VISMSLTVVTSLLEKYKIDPTQIG-----RLEVGSETVID---------------K--------SK-SIKTFLMQIFEKY 107 (354)
Q Consensus 57 ~~~La~~Aa~~aL~~ag~~~~dId-----~li~~t~t~~~---------------~--------~P-~~a~~l~~~Lgl~ 107 (354)
...|+..|+.+||+++|+++.+++ .|+++|..+++ . .| ..+..|+..+|+.
T Consensus 87 ~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~ 166 (254)
T PF00109_consen 87 QSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILFGLR 166 (254)
T ss_dssp HHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHHTB-
T ss_pred hhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccchhhhcCCC
Confidence 457899999999999999985332 34456655521 0 12 2467889999993
Q ss_pred CCCCeeEEeecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeecc-c------------cCC---------CCCCcccc
Q 018518 108 GNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA-V------------YAE---------GPARPTGG 165 (354)
Q Consensus 108 g~~~~~~~di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~-~------------~~~---------~~~~~lfG 165 (354)
| +++-+..+|+++++||..|..+|++|.+ +.+||.++|.. . ... ....+++|
T Consensus 167 G----~~~tv~~acaSgl~Al~~A~~~I~~G~~--d~~lvgg~d~~~~~~~~~~~~~~~~~s~~~~~~pf~~~~~G~v~g 240 (254)
T PF00109_consen 167 G----PSYTVSTACASGLAALEAAYRAIRSGEA--DVALVGGVDAPLSPFILAGFSALGALSADGPCRPFDPFADGFVLG 240 (254)
T ss_dssp S----SEEEEE-GGGHHHHHHHHHHHHHHTTSS--SEEEEEEEE--SSHHHHHHHHHTTBB-TTSGGGSTBTTB-SB-BB
T ss_pred C----ccccccccccccccccchhccccccccc--cccccccccccccccccccccccccccccccccccCCCCCCEEEE
Confidence 3 3566889999999999999999999977 99999999943 1 111 11358999
Q ss_pred ceeEEEEEccC
Q 018518 166 AAAVAMLIGPD 176 (354)
Q Consensus 166 DGAaA~lL~~~ 176 (354)
+||+++||++.
T Consensus 241 EGa~~~vLe~~ 251 (254)
T PF00109_consen 241 EGAGALVLERL 251 (254)
T ss_dssp -EEEEEEEEEH
T ss_pred CceEEEEEEEh
Confidence 99999999753
No 121
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=98.60 E-value=3.3e-07 Score=90.13 Aligned_cols=104 Identities=13% Similarity=0.069 Sum_probs=75.7
Q ss_pred eccccEEEeecCCCCCHHHHHHHHHHHHHHHcC-CCc-CCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeec
Q 018518 41 VGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYK-IDP-TQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST 118 (354)
Q Consensus 41 ~gig~r~~~~~~~~e~~~~La~~Aa~~aL~~ag-~~~-~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~ 118 (354)
.|+|...+....++.+..+|+.+|+++||+++| +++ +|||.+++++.............+.+.||+. ..+.+-+
T Consensus 9 vG~g~t~~~~~~~~~s~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~~~~~~~~~~~~~~~~~lg~~---~~~~~~v- 84 (385)
T PRK06066 9 VGIGWYGFRPTTPEVSFREMMFEAASRAYKDAGNINPRRDVDSFISCQEDFWEGIAIADEFAPDQIGGA---MRPTMTV- 84 (385)
T ss_pred EEeeecCCcCCCCCCCHHHHHHHHHHHHHHhcCCCCChhcCCEEEEecCcccCcccccchhHHHHcccC---CCCeEEE-
Confidence 566666543222467889999999999999999 997 7999998754211111122234567889982 2233334
Q ss_pred CcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeec
Q 018518 119 NACYGGTAALFNCVNWVESASWDGRYGLVVCTDS 152 (354)
Q Consensus 119 ~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~ 152 (354)
|+++..++..|...|++|.+ ++|||++.|+
T Consensus 85 --~~sg~~a~~~A~~aV~sG~~--d~vLv~g~~~ 114 (385)
T PRK06066 85 --AGDGLQGLAHAVMHINSGLA--NVVVVEAHSK 114 (385)
T ss_pred --eCcHHHHHHHHHHHHHcCCC--CEEEEEEEee
Confidence 88999999999999999987 9999999885
No 122
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=98.56 E-value=3.2e-06 Score=83.89 Aligned_cols=163 Identities=12% Similarity=0.097 Sum_probs=104.2
Q ss_pred cceEEeEEEEEcCCccccHHHHHHhh--CCC---c-chhe-eccccEEEe---ec-----C-----CCCCHHHHHHHHHH
Q 018518 7 KNVGILALDIYFPPTCVLQEALEVHD--GVS---K-GKYT-VGLGQDCMA---FC-----S-----EVEDVISMSLTVVT 66 (354)
Q Consensus 7 ~~v~I~~ig~~lP~~~v~~e~l~~~~--~~~---~-~~~~-~gig~r~~~---~~-----~-----~~e~~~~La~~Aa~ 66 (354)
.+|.|+|+|...|--. +.+++.+.+ |.+ + ..+. .+...+... +. + .-.....++..|++
T Consensus 2 ~rVvITG~G~vsp~G~-~~~~~w~~l~~G~sgi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~a~~aa~ 80 (406)
T PRK07967 2 RRVVITGLGIVSSIGN-NQQEVLASLREGRSGITFSPEFAEMGMRSQVWGNVKLDPTGLIDRKVMRFMGDASAYAYLAME 80 (406)
T ss_pred CcEEEEcceEECCCCC-CHHHHHHHHHcCCCceeECCcccccCCCCceEEEcCCChhhcCCHHHhhcCCHHHHHHHHHHH
Confidence 4799999999999873 667766543 221 1 1111 011111000 00 0 01123468899999
Q ss_pred HHHHHcCCCcCCcC----EEEEecccCCC--------------------------CCC-CHHHHHHHHhcCcCCCCeeEE
Q 018518 67 SLLEKYKIDPTQIG----RLEVGSETVID--------------------------KSK-SIKTFLMQIFEKYGNTDIEGV 115 (354)
Q Consensus 67 ~aL~~ag~~~~dId----~li~~t~t~~~--------------------------~~P-~~a~~l~~~Lgl~g~~~~~~~ 115 (354)
+||+++|+++.+.+ .++++|..+.. ..| ..+..|...+|+.| +++
T Consensus 81 ~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~l~G----p~~ 156 (406)
T PRK07967 81 QAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFKIKG----VNY 156 (406)
T ss_pred HHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHCCCC----Ccc
Confidence 99999998754332 24455532210 011 25677889999843 346
Q ss_pred eecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeeccc------c----------CC------C-----CCCcccccee
Q 018518 116 DSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV------Y----------AE------G-----PARPTGGAAA 168 (354)
Q Consensus 116 di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~~------~----------~~------~-----~~~~lfGDGA 168 (354)
-+..+|++++.||..|..+|++|.+ +.+||.++|... + .. + ..-++.|+||
T Consensus 157 tvs~aCas~~~Ai~~A~~~ir~G~~--d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~G~v~gEGa 234 (406)
T PRK07967 157 SISSACATSAHCIGNAVEQIQLGKQ--DIVFAGGGEELDWEMSCLFDAMGALSTKYNDTPEKASRAYDANRDGFVIAGGG 234 (406)
T ss_pred ccccHhHHHHHHHHHHHHHHHcCCC--CEEEEeeecccChHHHHHHHHhhhhccCCCCCCCcCCcCCcCCCCceeeeceE
Confidence 6899999999999999999999977 999999998631 0 00 1 1246789999
Q ss_pred EEEEEccC
Q 018518 169 VAMLIGPD 176 (354)
Q Consensus 169 aA~lL~~~ 176 (354)
+++||++.
T Consensus 235 a~lvLe~~ 242 (406)
T PRK07967 235 GVVVVEEL 242 (406)
T ss_pred EEEEEeeH
Confidence 99999874
No 123
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=98.50 E-value=9.7e-07 Score=87.27 Aligned_cols=97 Identities=12% Similarity=0.095 Sum_probs=85.9
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCC-CCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHH
Q 018518 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDK-SKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCV 132 (354)
Q Consensus 54 ~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~-~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~ 132 (354)
+.++.+|+..+.+.+|++++++|++||.||++...+.-. .+.++-...-..|+ +..++++-|+..|+|++.|+..|.
T Consensus 26 ~~~~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~agl--p~~vp~~tvnr~C~Sgl~ai~~aa 103 (417)
T PRK06025 26 HLHPQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGY--DIKASGVTLDRFCGGGITSVNLAA 103 (417)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCC--CCCCCeeeeccccchHHHHHHHHH
Confidence 457889999999999999999999999999988755432 36778888888899 678999999999999999999999
Q ss_pred HHHHhCCCCCCEEEEEEeeccc
Q 018518 133 NWVESASWDGRYGLVVCTDSAV 154 (354)
Q Consensus 133 ~~l~sg~~~~~~vLVV~~e~~~ 154 (354)
..|++|.. +.+|..+.|.++
T Consensus 104 ~~I~~G~~--~~~laGG~EsmS 123 (417)
T PRK06025 104 AQIMSGME--DLVIAGGTEMMS 123 (417)
T ss_pred HHHHcCCC--CEEEEeeeeccC
Confidence 99999976 999999999984
No 124
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=98.40 E-value=2.8e-05 Score=72.60 Aligned_cols=182 Identities=14% Similarity=0.042 Sum_probs=102.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHHHHH
Q 018518 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVE 136 (354)
Q Consensus 57 ~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~~l~ 136 (354)
-..|..+|++.+|++++++++|||.++-+---. + -..+++.++.|++ +-+-+-++|+.+.-+|.+|..++.
T Consensus 51 E~~m~~~A~~~al~Ka~l~~~dId~~~aGDLln-Q--~i~s~f~ar~l~i------Pf~GlygACST~~e~l~laa~~vd 121 (329)
T PF07451_consen 51 ESKMQKEAVELALKKAGLKKEDIDYLFAGDLLN-Q--IISSSFAARDLGI------PFLGLYGACSTMMESLALAAMLVD 121 (329)
T ss_dssp HHHHHHHHHHHHHHHTT--GGG-SEEEEEETTC-C--CCHHHHHHHHHT--------EEEB--CCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCeEEEehhhhh-h--hHHHHHHHHhcCC------CccchhhHHHHHHHHHHHHHHHHh
Confidence 357999999999999999999999999765332 2 2457889999986 367888999999999999999999
Q ss_pred hCCCCCCEEEEEEeecc-------ccCC-----C-CCCccccceeEEEEEccCCC-ceeeecceeecccccccccccCCC
Q 018518 137 SASWDGRYGLVVCTDSA-------VYAE-----G-PARPTGGAAAVAMLIGPDAP-IAFESKLRGSHMSHAYDFYKPNLA 202 (354)
Q Consensus 137 sg~~~~~~vLVV~~e~~-------~~~~-----~-~~~~lfGDGAaA~lL~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~ 202 (354)
+|-. +++|..++-.. +|.. | ++..---=||+|+||++.+. ..+.. .+.++ +-|+-..
T Consensus 122 gg~a--~~vla~tSSH~~tAERQfR~P~EyG~Qrp~tAqwTVTGaGa~il~~~~~~p~It~---~T~Gk-VvD~G~~--- 192 (329)
T PF07451_consen 122 GGFA--DYVLAATSSHFATAERQFRFPTEYGGQRPPTAQWTVTGAGAAILSKEGSGPRITH---ATIGK-VVDMGIK--- 192 (329)
T ss_dssp TTS---SEEEEEEEE-CCHHHHHT---GGGT----TT--EE--EEEEEEEESS--SEEEEE---EE-----B-SS-----
T ss_pred CCCc--ceEEEEeccccchhhhhccCchhccCCCCCcccEEEeceEEEEEecCCCCcEEEE---EEEEE-EEEcCCC---
Confidence 9965 99999988664 2321 2 22222234888999998754 33332 22222 1111110
Q ss_pred CccccccCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccCcceeec---cccchHHHHHHHHHhcch
Q 018518 203 SEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVF---HSPYNKLVQKSFARLFFN 268 (354)
Q Consensus 203 ~~~~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~did~~v~---Hq~n~~i~~~~~~~l~~~ 268 (354)
+-..| -----+.+.+.+.+... ..|.+++|.|.++. -.-+..|+..+.++-|++
T Consensus 193 -D~~nM--------GaAMAPAA~dTI~~h~~---D~g~~p~dYDlIvTGDLg~vG~~il~~Ll~~~G~~ 249 (329)
T PF07451_consen 193 -DPNNM--------GAAMAPAAADTIEQHFK---DTGRSPDDYDLIVTGDLGKVGRKILRDLLKEKGYD 249 (329)
T ss_dssp --TT-H--------HHHHHHHHHHHHHHHHH---HCT--GGG-SEEEESS-HHHHHHHHHHHHHHTT--
T ss_pred -Ccccc--------hhhHhHHHHHHHHHHHH---HhCCChhhcCeEEecchHHHHHHHHHHHHHHcCCC
Confidence 00011 00011223333322222 24799999999995 445677888887777763
No 125
>PRK07937 lipid-transfer protein; Provisional
Probab=98.30 E-value=2.3e-06 Score=83.28 Aligned_cols=104 Identities=14% Similarity=0.058 Sum_probs=70.1
Q ss_pred eccccEEEeecCCCCCH-HHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCC--CCHHHHHHHHhcCcCCCCeeEEee
Q 018518 41 VGLGQDCMAFCSEVEDV-ISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKS--KSIKTFLMQIFEKYGNTDIEGVDS 117 (354)
Q Consensus 41 ~gig~r~~~~~~~~e~~-~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~--P~~a~~l~~~Lgl~g~~~~~~~di 117 (354)
.|+|...+....++.+. .+|+.+|+++||+++|++++|||.++.++. +... ......+...+|+ .+..+..-+
T Consensus 7 vG~g~t~~~~~~~~~~~~~el~~eA~~~Al~DAgl~~~dID~~~~~~~--~~~~~~~~~~~~~~~~~G~--~~~~~~~~v 82 (352)
T PRK07937 7 VGFAQAPHVRRTDGTTNGVEMLMPCFAELYAELGITKSDIGFWCSGSS--DYLAGRAFSFISAIDSIGA--VPPINESHV 82 (352)
T ss_pred EEeeccccccCCCCCCcHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcc--ccccccccchhhHHhhccC--CCCCceEEe
Confidence 46666554332223344 799999999999999999999998864332 2211 1122334566776 222223333
Q ss_pred cCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeecc
Q 018518 118 TNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA 153 (354)
Q Consensus 118 ~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~ 153 (354)
. +++..++..|...|++|.+ +.|||++.|+.
T Consensus 83 ~---~~g~~a~~~A~~aI~sG~~--d~VLv~g~~k~ 113 (352)
T PRK07937 83 E---MDAAWALYEAWVKLLTGEV--DTALVYGFGKS 113 (352)
T ss_pred c---CcHHHHHHHHHHHHhcCCC--CEEEEEEeccc
Confidence 3 4577899999999999987 99999998853
No 126
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.26 E-value=2.6e-05 Score=77.11 Aligned_cols=179 Identities=16% Similarity=0.139 Sum_probs=113.0
Q ss_pred CHHHHHHHHHHHHHHHcCCC-cCCcC---EEEEecccCCC----------------------C----CC-CHHHHHHHHh
Q 018518 56 DVISMSLTVVTSLLEKYKID-PTQIG---RLEVGSETVID----------------------K----SK-SIKTFLMQIF 104 (354)
Q Consensus 56 ~~~~La~~Aa~~aL~~ag~~-~~dId---~li~~t~t~~~----------------------~----~P-~~a~~l~~~L 104 (354)
....++..|+.+||+++|++ ..+.+ .++++|..+.. . .| ..+..++..+
T Consensus 70 ~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~~ 149 (412)
T COG0304 70 RFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIVF 149 (412)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHHh
Confidence 35679999999999999998 33343 23334432210 0 12 2456678888
Q ss_pred cCcCCCCeeEEeecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeecc----------------ccCC----------C
Q 018518 105 EKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA----------------VYAE----------G 158 (354)
Q Consensus 105 gl~g~~~~~~~di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~----------------~~~~----------~ 158 (354)
|+.| +.+-+..+|+++..++..|.++|+.|.. +.+|+.++|.. ..++ +
T Consensus 150 g~~G----~~~~~~tACatg~~AIg~A~~~I~~G~a--d~~iaGG~e~~i~~~~i~gF~am~Alst~nd~p~~asrPfd~ 223 (412)
T COG0304 150 GLKG----PNYTPVTACATGAHAIGDAVRLIRLGKA--DVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPFDK 223 (412)
T ss_pred CCCC----CcCChhhhHHhHHHHHHHHHHHHHcCCC--CEEEEcccccccCHHHHHHHHHHHHhccCCCCccccCCCCCC
Confidence 8843 3566789999999999999999999976 99999999762 0111 1
Q ss_pred -CCCccccceeEEEEEccCCC-----ceeeecceeecc-cccccccccCCCCccccccCcchHHHHHHHHHHHHHHHHHH
Q 018518 159 -PARPTGGAAAVAMLIGPDAP-----IAFESKLRGSHM-SHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQK 231 (354)
Q Consensus 159 -~~~~lfGDGAaA~lL~~~~~-----~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~G~~~~~~~~~~~~~~~~~~l~~ 231 (354)
..-+++|.||+++||+..+. ..+.....+... .+.++...|. .+|.- ...+++..++.
T Consensus 224 ~RdGfv~gEGag~lVLE~~ehA~aRGA~Iyaei~G~g~~~Da~h~t~P~-------p~g~G--------a~~am~~AL~~ 288 (412)
T COG0304 224 NRDGFVIGEGAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPA-------PDGEG--------AIRAMRAALAD 288 (412)
T ss_pred CCCCEEEecceeEEEecChhhHHhCCCceEEEEEEEEecccccccCCCC-------CCCch--------HHHHHHHHHHH
Confidence 13488999999999987642 111110112111 1223333332 23332 12445555555
Q ss_pred HHhhhcCCCCccCcceeeccccchHHHHHH
Q 018518 232 FEKLEGRQFSMLDVDYFVFHSPYNKLVQKS 261 (354)
Q Consensus 232 ~~~~~~~g~~~~did~~v~Hq~n~~i~~~~ 261 (354)
+ |++++||||+-.|--+...-++.
T Consensus 289 A------gl~~~~idYinaHgTsT~~nD~~ 312 (412)
T COG0304 289 A------GLTPEDIDYINAHGTSTPANDKA 312 (412)
T ss_pred c------CCCHhHCCEEeCCCccCCCccHH
Confidence 5 69999999999997665554444
No 127
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=98.24 E-value=1.9e-06 Score=78.52 Aligned_cols=109 Identities=19% Similarity=0.147 Sum_probs=85.2
Q ss_pred chheeccccEEEeecC--CCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeE
Q 018518 37 GKYTVGLGQDCMAFCS--EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEG 114 (354)
Q Consensus 37 ~~~~~gig~r~~~~~~--~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~ 114 (354)
..+..|+|..++.-+. ++.+-.||+.+|..++|+++++.-++|+--+++-..++.. ...+-.-.+|+ ..++.
T Consensus 7 rvyvvgvgmtkf~kpg~~~~~dypd~a~ea~tkal~da~ikys~vqqa~vgyvfgdst---cgqraiyevgm---tgipi 80 (408)
T KOG1406|consen 7 RVYVVGVGMTKFEKPGRVADWDYPDFAKEAITKALQDAGIKYSEVQQAVVGYVFGDST---CGQRAIYEVGM---TGIPI 80 (408)
T ss_pred eEEEEecceeeecCCCcccCCCCchHHHHHHHHHHHhcCCCHHHHHhhhheeeecCCc---cchHHHHhccc---cCcce
Confidence 3345667766643321 2456679999999999999999999998776665555432 22233348898 78999
Q ss_pred EeecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeecc
Q 018518 115 VDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA 153 (354)
Q Consensus 115 ~di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~ 153 (354)
|.++++|+++..||.+|.++|++|.. +.||..+-|++
T Consensus 81 ~nvnnncatgssalflakqiiesgn~--dcvlalgfekm 117 (408)
T KOG1406|consen 81 YNVNNNCATGSSALFLAKQIIESGNS--DCVLALGFEKM 117 (408)
T ss_pred eeccCccccCchHHHHHHHHHhcCCc--ceEEeechhhh
Confidence 99999999999999999999999965 99999999998
No 128
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=98.18 E-value=2.7e-05 Score=91.75 Aligned_cols=75 Identities=13% Similarity=0.051 Sum_probs=59.2
Q ss_pred HHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeecc-c------------cC-C----
Q 018518 96 IKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA-V------------YA-E---- 157 (354)
Q Consensus 96 ~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~-~------------~~-~---- 157 (354)
++.+|...||+.| +.+-|..+|++++.||..|.+.|++|.+ +.+|+-+++.. . +. +
T Consensus 185 ~A~RIS~~f~L~G----ps~tVdtACsSSL~Al~~A~~~L~~G~~--D~alvGGv~~~~~p~~~~~fs~~~~lS~~g~cr 258 (2582)
T TIGR02813 185 ISGRIANRFDLGG----MNCVVDAACAGSLAAIRMALSELLEGRS--EMMITGGVCTDNSPFMYMSFSKTPAFTTNEDIQ 258 (2582)
T ss_pred HHHHHHHHhCCCC----CcccccchhHHHHHHHHHHHHHHHcCCC--CEEEEecceeeCCHHHHHHHHhccCcCCCCCcc
Confidence 4678889999943 3577899999999999999999999977 89999888763 0 01 0
Q ss_pred ----CCCCccccceeEEEEEccC
Q 018518 158 ----GPARPTGGAAAVAMLIGPD 176 (354)
Q Consensus 158 ----~~~~~lfGDGAaA~lL~~~ 176 (354)
+...+++|+|++++||.+-
T Consensus 259 pFD~~adG~v~GEGag~vvLkrL 281 (2582)
T TIGR02813 259 PFDIDSKGMMIGEGIGMMALKRL 281 (2582)
T ss_pred CCCCCCCcccccceEEEEEeCcH
Confidence 1134789999999999864
No 129
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.02 E-value=0.00017 Score=79.53 Aligned_cols=172 Identities=15% Similarity=0.100 Sum_probs=115.3
Q ss_pred HHHHHHHHHHHHcCCCcCCcC----EEEEecccCCCCCCC-------------------HHHHHHHHhcCcCCCCeeEEe
Q 018518 60 MSLTVVTSLLEKYKIDPTQIG----RLEVGSETVIDKSKS-------------------IKTFLMQIFEKYGNTDIEGVD 116 (354)
Q Consensus 60 La~~Aa~~aL~~ag~~~~dId----~li~~t~t~~~~~P~-------------------~a~~l~~~Lgl~g~~~~~~~d 116 (354)
|..+.+-+||+++|+.|..+. .|+.+.+..+|.... .+..|...|+++| +.+.
T Consensus 94 llLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy~l~l~G----Ps~~ 169 (1061)
T COG3321 94 LLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGLSG----PSVT 169 (1061)
T ss_pred HHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHHHHHhcCCC----CCcc
Confidence 889999999999999999988 566677666664332 5677889999954 3578
Q ss_pred ecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeecc-----c--c------C-CC--------CCCccccceeEEEEEc
Q 018518 117 STNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA-----V--Y------A-EG--------PARPTGGAAAVAMLIG 174 (354)
Q Consensus 117 i~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~-----~--~------~-~~--------~~~~lfGDGAaA~lL~ 174 (354)
|..+|++.+.|+++|...|++|.+ ..+|+=++... . + . +. ..-++.|.|+++++|.
T Consensus 170 vdtaCSSsLvAvhlA~~sL~~Ge~--d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~~adG~v~geG~g~vvLK 247 (1061)
T COG3321 170 VDTACSSSLVAVHLACQSLRLGEC--DLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADADGYVRGEGAGVVVLK 247 (1061)
T ss_pred ccchhhHHHHHHHHHHHHHHcCCC--CEEEecceEeccCCcceeeeecccCcCCCCcceecccCCCCEEEeeeEEEEEEE
Confidence 899999999999999999999976 77777666554 0 0 1 10 1247899999999997
Q ss_pred cCCC--------ce-eeecceeecccccccccccCCCCccccccCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccCc
Q 018518 175 PDAP--------IA-FESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDV 245 (354)
Q Consensus 175 ~~~~--------~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~di 245 (354)
+-.. +. +..+....+|..- .+..|+ ..+-..+++..++.+ |+++++|
T Consensus 248 rl~~A~~dgd~IyavI~gsavn~dG~~~-gltaP~-----------------~~aQ~~v~~~al~~a------~i~p~tv 303 (1061)
T COG3321 248 RLSDAERDGDRIYAVIRGSAVNQDGRSN-GLTAPN-----------------LEAQADVIREALADA------GIDPATV 303 (1061)
T ss_pred EhHHHHhCCCeEEEEEEeeeeccCCCcC-CCCCCC-----------------HHHHHHHHHHHHHhc------CCCcccC
Confidence 6321 11 1111111121111 222221 122334455555554 6999999
Q ss_pred ceeeccccchHHHHHH
Q 018518 246 DYFVFHSPYNKLVQKS 261 (354)
Q Consensus 246 d~~v~Hq~n~~i~~~~ 261 (354)
+|+=.|..+..+-+-+
T Consensus 304 ~yvEaHgTGT~lGDpi 319 (1061)
T COG3321 304 QYVEAHGTGTPLGDPI 319 (1061)
T ss_pred cEEEecCCCCCCcCHH
Confidence 9999999776655444
No 130
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=97.81 E-value=8.6e-05 Score=73.36 Aligned_cols=94 Identities=14% Similarity=0.142 Sum_probs=72.7
Q ss_pred HHHHHHHHHHHHHHHc--CCCcCCcCEEEEecccCCC-CCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHH
Q 018518 57 VISMSLTVVTSLLEKY--KIDPTQIGRLEVGSETVID-KSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVN 133 (354)
Q Consensus 57 ~~~La~~Aa~~aL~~a--g~~~~dId~li~~t~t~~~-~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~ 133 (354)
..+|.....+..+++. ++++.+||.+|+++..+.. ..+..+..++..+|+ +.+++++.++.+|++++.|+..|+.
T Consensus 27 ~e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl--~~~~p~~~V~~~c~SG~~Av~~A~~ 104 (392)
T COG0183 27 AEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGL--PGSVPAVTVNRACASGLAAVRLAAQ 104 (392)
T ss_pred HHHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCC--CCCCCceEEeccchhHHHHHHHHHH
Confidence 3344444444444322 4666678888888655442 457888899999999 4469999999999999999999999
Q ss_pred HHHhCCCCCCEEEEEEeeccc
Q 018518 134 WVESASWDGRYGLVVCTDSAV 154 (354)
Q Consensus 134 ~l~sg~~~~~~vLVV~~e~~~ 154 (354)
.|++|.+ +.+|+++.|+++
T Consensus 105 ~I~sG~~--dvvlagG~E~mS 123 (392)
T COG0183 105 AIASGEA--DVVLAGGVEKMS 123 (392)
T ss_pred HHHCCCC--CEEEEEeeeecc
Confidence 9999976 999999999984
No 131
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.33 E-value=0.0013 Score=62.75 Aligned_cols=228 Identities=14% Similarity=0.115 Sum_probs=131.7
Q ss_pred CcceEEeEEEEEcCCccccHHHHHHhh----CCCc-c-----hhee-ccccEEEeecCC------C----CCHHHHHHHH
Q 018518 6 PKNVGILALDIYFPPTCVLQEALEVHD----GVSK-G-----KYTV-GLGQDCMAFCSE------V----EDVISMSLTV 64 (354)
Q Consensus 6 ~~~v~I~~ig~~lP~~~v~~e~l~~~~----~~~~-~-----~~~~-gig~r~~~~~~~------~----e~~~~La~~A 64 (354)
..+|.|+|+|...|--.=..+-+...+ |+.. + .+-. -.|.-.+ +... + .+...|+..|
T Consensus 23 ~rRVVITGmG~VTplG~~v~~~w~~Ll~GesGI~~l~~~d~k~~p~~v~g~Ip~-f~~e~~~s~~~~r~ms~~~~~al~a 101 (440)
T KOG1394|consen 23 MRRVVITGMGAVTPLGNGVHTSWRNLLSGESGISSLEGPDYKSIPFTVAGKIPR-FSVEDYVSKGDERRMSKFTKLALTA 101 (440)
T ss_pred ceeEEEeccceeecCCCChHHHHHHhhccccCcccccccccccCcchheeeccc-cccccccchhhhhhhhHHHHHHHHH
Confidence 357999999999998753333333332 2211 1 1111 1111110 1111 1 1356799999
Q ss_pred HHHHHHHcCCCcC---CcC----EEEEecccC---------------------CCCCCC-----HHHHHHHHhcCcCCCC
Q 018518 65 VTSLLEKYKIDPT---QIG----RLEVGSETV---------------------IDKSKS-----IKTFLMQIFEKYGNTD 111 (354)
Q Consensus 65 a~~aL~~ag~~~~---dId----~li~~t~t~---------------------~~~~P~-----~a~~l~~~Lgl~g~~~ 111 (354)
+++||+++++-+. +.| .+.++|.-+ ++.+|- .+.+|.-++|+.|
T Consensus 102 a~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm~~gl~G--- 178 (440)
T KOG1394|consen 102 AEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSMKYGLRG--- 178 (440)
T ss_pred HHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhhhhcCcC---
Confidence 9999999998765 223 333444322 123332 2567888889844
Q ss_pred eeEEeecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeecc-c--------------c-CCC-----------CCCccc
Q 018518 112 IEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA-V--------------Y-AEG-----------PARPTG 164 (354)
Q Consensus 112 ~~~~di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~-~--------------~-~~~-----------~~~~lf 164 (354)
+-..++.+|+.+.+++--|.++|+.|.. +..|.=++|.+ + - ++. .+.+++
T Consensus 179 -pnhsvSTACATg~h~igda~n~Ir~Gda--DvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRPfD~~RdGFVm 255 (440)
T KOG1394|consen 179 -PNHSVSTACATGNHCIGDAFNFIRLGDA--DVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRPFDKKRDGFVM 255 (440)
T ss_pred -CchhhHhhhhhccchHHHHHHHHHhCcc--ceeeccCcceeecchhhhhHHHHHHhhhcCCCccccCCCCccCCCceee
Confidence 2356788999999999999999999964 55555566765 0 0 111 134789
Q ss_pred cceeEEEEEccCCC-----ceeeecceee-cccccccccccCCCCccccccCcchHHHHHHHHHHHHHHHHHHHHhhhcC
Q 018518 165 GAAAVAMLIGPDAP-----IAFESKLRGS-HMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGR 238 (354)
Q Consensus 165 GDGAaA~lL~~~~~-----~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 238 (354)
|.|++.+||+.=+. ..+.....|+ .+.+.+.+..|. -||.- ...+++..++.+
T Consensus 256 GEGagvlvlEelEHA~~RgA~I~AE~lGygls~Da~HiT~P~-------~dG~G--------a~~am~raL~~A------ 314 (440)
T KOG1394|consen 256 GEGAGVLVLEELEHAKKRGAPIYAEVLGYGLSSDAYHITSPD-------PDGAG--------AVLAMERALKDA------ 314 (440)
T ss_pred ccceeEEehHhHHHHHHcCCceeHHhhcCcccccccccCCCC-------CCcch--------HHHHHHHHHHHc------
Confidence 99999999986431 1121111221 112333334442 34443 122334444444
Q ss_pred CCCccCcceeeccccchHHHHHH
Q 018518 239 QFSMLDVDYFVFHSPYNKLVQKS 261 (354)
Q Consensus 239 g~~~~did~~v~Hq~n~~i~~~~ 261 (354)
|++++||||+=-|--+..+-+.+
T Consensus 315 gl~pe~i~YvNAHATST~~GD~a 337 (440)
T KOG1394|consen 315 GLSPEDIDYVNAHATSTPLGDAA 337 (440)
T ss_pred CCChhhcCeeecccccCcCchHH
Confidence 79999999999998765554443
No 132
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=97.28 E-value=0.00073 Score=63.47 Aligned_cols=96 Identities=8% Similarity=0.087 Sum_probs=77.0
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHH
Q 018518 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVN 133 (354)
Q Consensus 54 ~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~ 133 (354)
.-++.+|+.-|++.+|+++.++++|++-+|++..-.-..--..+...+=--|| +.++.|.-++-.|++++-|+.+|.+
T Consensus 27 sl~A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~AnlGQapaRQaalgAGl--p~sv~~tTvNkvCaSgmKAv~laaQ 104 (396)
T KOG1390|consen 27 SLTATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGL--PYSVPATTVNKVCASGMKAVILAAQ 104 (396)
T ss_pred cCchhhHHHHHHHHHHHhcCCCHHHhhhhhhccccccccCcchHHHHHhhcCC--CcceeeEeehhhhhhhHHHHHHHHH
Confidence 35688999999999999999999999999988765443333334433333456 6689999999999999999999999
Q ss_pred HHHhCCCCCCEEEEEEeecc
Q 018518 134 WVESASWDGRYGLVVCTDSA 153 (354)
Q Consensus 134 ~l~sg~~~~~~vLVV~~e~~ 153 (354)
-|+.|.+ +.++.-+-|.+
T Consensus 105 sI~~G~~--divVaGGmEsM 122 (396)
T KOG1390|consen 105 SIQTGHA--DIVVAGGMESM 122 (396)
T ss_pred HHhcCCc--cEEEecccchh
Confidence 9999965 77777777887
No 133
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=96.90 E-value=0.0016 Score=59.55 Aligned_cols=97 Identities=11% Similarity=0.128 Sum_probs=75.9
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcC-cC-CCCeeEEeecCcChhHHHHHHH
Q 018518 53 EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK-YG-NTDIEGVDSTNACYGGTAALFN 130 (354)
Q Consensus 53 ~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl-~g-~~~~~~~di~~~C~g~~~aL~~ 130 (354)
.+-+..+|.+-|++.+|+.+++.++.+|.+|++..-. .-+-+.|+.+..|| +| +...+++-|+-=|.++.+++..
T Consensus 24 Kg~~aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~a---SSsDgIYl~RHvGL~~GvP~e~pALtiNRLCGSGFQsiVN 100 (396)
T KOG1391|consen 24 KGLSATDLGVVAAKAALKAANVGAEAVDHVIMGNVLA---SSSDGIYLARHVGLRVGVPKETPALTINRLCGSGFQSIVN 100 (396)
T ss_pred cCcchhhHHHHHHHHHHhhcCCChhhcceEEEeeeee---ccCCceEeeeccccccCCcCccCceeehhhhcccHHHHHh
Confidence 3457889999999999999999999999999876421 11234566667766 22 4578899999999999999999
Q ss_pred HHHHHHhCCCCCCEEEEEEeeccc
Q 018518 131 CVNWVESASWDGRYGLVVCTDSAV 154 (354)
Q Consensus 131 A~~~l~sg~~~~~~vLVV~~e~~~ 154 (354)
+.+-|.-|.. +.+|.=+.|.++
T Consensus 101 gaQ~I~vgea--~ivL~GGtEnMS 122 (396)
T KOG1391|consen 101 GAQEICVGEA--EIVLCGGTENMS 122 (396)
T ss_pred hHHHhhcCcc--eEEEecCccccc
Confidence 9999999854 666666778773
No 134
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=96.68 E-value=0.0024 Score=63.40 Aligned_cols=73 Identities=14% Similarity=0.145 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHhhhcCCCCccCcceeeccccchHHHHHHHHHhcchhhhcccCchhhHHhhhcCCCCCCCccccccchHH
Q 018518 223 SCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDL 302 (354)
Q Consensus 223 ~~~~~~l~~~~~~~~~g~~~~did~~v~Hq~n~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 302 (354)
.+++.+++++ |++++|||+|-+|+++..+.....+.++++.
T Consensus 319 ~Ai~~aL~~A------Gl~~~DID~~ei~eaFa~~~l~~~~~lg~~~--------------------------------- 359 (417)
T PRK06025 319 PAAKKVLAKA------GLTKDDIDLWEINEAFAVVAEKFIRDLDLDR--------------------------------- 359 (417)
T ss_pred HHHHHHHHHc------CCCHHHCcEEEEchHHHHHHHHHHHHcCCCh---------------------------------
Confidence 4556667665 6999999999999999999888889998742
Q ss_pred HHHHHHHHHHHHHhhccccc---ccccccCccchhHHHhHHHhhhccc
Q 018518 303 EKASQQVAKQLYDLKVQPST---LIPKQVGNMYTASLYAAFASLLHEK 347 (354)
Q Consensus 303 ~~~~~~~~~~~~~~k~~~s~---~~~~~~GN~~saSi~~~L~~~l~~~ 347 (354)
+++-++- .+-.-+||+++..++.++.++.+++
T Consensus 360 -------------~~vN~~GG~ia~GHp~GaTGa~~v~~ll~qL~~~g 394 (417)
T PRK06025 360 -------------DKVNVNGGAIALGHPIGATGSILIGTVLDELERRG 394 (417)
T ss_pred -------------hhccccCCHHhcCCchhHHHHHHHHHHHHHHHHhC
Confidence 2222211 1124789999999999998887654
No 135
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=95.61 E-value=0.027 Score=53.02 Aligned_cols=95 Identities=16% Similarity=0.241 Sum_probs=78.6
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHh-cCcCCCCeeEEeecCcChhHHHHHHHHH
Q 018518 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIF-EKYGNTDIEGVDSTNACYGGTAALFNCV 132 (354)
Q Consensus 54 ~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~L-gl~g~~~~~~~di~~~C~g~~~aL~~A~ 132 (354)
+..+-+|-..+.+..+++.+++|+.|+-|+++|+-..-. -.+.+.++..+ |+ +..++..-+|--|++++.|+...+
T Consensus 58 dt~pDeLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~-ga~e~R~a~~~ag~--P~tvpv~tvNRqCsSGLqaVadiA 134 (435)
T KOG1389|consen 58 DTRPDELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGS-GASECRMAAFYAGF--PETVPVRTVNRQCSSGLQAVADIA 134 (435)
T ss_pred cCChHHHHHHHHHHHHhhcCCCHHHhcceeeeeccCCCc-chHHHHHHHHHcCC--CcccchhhhhhhhhhHHHHHHHHH
Confidence 456778999999999999999999999999999865433 25566665554 66 556777777889999999999999
Q ss_pred HHHHhCCCCCCEEEEEEeecc
Q 018518 133 NWVESASWDGRYGLVVCTDSA 153 (354)
Q Consensus 133 ~~l~sg~~~~~~vLVV~~e~~ 153 (354)
.-|++|.| +-.|-.+.|.+
T Consensus 135 ~~Ir~G~y--dIGla~GvESM 153 (435)
T KOG1389|consen 135 AKIRAGFY--DIGLAAGVESM 153 (435)
T ss_pred HHHhcCce--eeecccchhhh
Confidence 99999988 88899999988
No 136
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=95.49 E-value=0.011 Score=54.89 Aligned_cols=93 Identities=14% Similarity=0.102 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHHHHH
Q 018518 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVE 136 (354)
Q Consensus 57 ~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~~l~ 136 (354)
+.||+.+|...+|++..++.+.||.||++|.-.....-.++..-+-.-|. +..+++--+..+|-+.-.|+.+...+|.
T Consensus 66 phdlar~al~~ll~kt~lpke~~dyii~gtviqevktsniareaal~agf--sdktpahtvtmacissn~amttgmglia 143 (465)
T KOG1392|consen 66 PHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIAREAALLAGF--SDKTPAHTVTMACISSNVAMTTGMGLIA 143 (465)
T ss_pred hhHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHhcchHHHHHHHhcCC--CCCCccceeeeehhccchhhhccceeEe
Confidence 56899999999999999999999999999976554433344433333466 4568888899999999999999999999
Q ss_pred hCCCCCCEEEEEEeecc
Q 018518 137 SASWDGRYGLVVCTDSA 153 (354)
Q Consensus 137 sg~~~~~~vLVV~~e~~ 153 (354)
+|.+ ..++.=+.|.+
T Consensus 144 tg~~--dvivaggvelm 158 (465)
T KOG1392|consen 144 TGNA--DVIVAGGVELM 158 (465)
T ss_pred eCCc--CEEEEcceeec
Confidence 9976 44444455655
No 137
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=95.17 E-value=0.038 Score=42.51 Aligned_cols=73 Identities=15% Similarity=0.105 Sum_probs=43.5
Q ss_pred HHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEee---cC-cChhHHHHHHHHHHHHHhCCC-CCC
Q 018518 69 LEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDS---TN-ACYGGTAALFNCVNWVESASW-DGR 143 (354)
Q Consensus 69 L~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di---~~-~C~g~~~aL~~A~~~l~sg~~-~~~ 143 (354)
|+++|++++|||.+++...+ ......+.+.+|+ ++.....++ ++ +|++-..+|..+.. .|.. +++
T Consensus 1 L~~~g~~~~did~~i~hq~~-----~~~~~~~~~~lgi--~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~---~g~~~~Gd 70 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQAS-----KKILDSIAKRLGI--PPERFPDNLAEYGNTGSASIPINLADALE---EGRIKPGD 70 (90)
T ss_dssp HHHTT--GGGESEEEE-SSS-----HHHHHHHHHHHTS---GGGBE-THHHH-B-GGGHHHHHHHHHHH---TTSSCTTE
T ss_pred CccccCCHHHCCEEEeCCCC-----HHHHHHHHHHcCC--cHHHHHHHHhccCcchhhhHHHHHHHHHH---cCCCCCCC
Confidence 68999999999999986543 2334558899999 444333333 23 66666666655444 4322 557
Q ss_pred EEEEEEee
Q 018518 144 YGLVVCTD 151 (354)
Q Consensus 144 ~vLVV~~e 151 (354)
++|+++.-
T Consensus 71 ~vl~~~~G 78 (90)
T PF08541_consen 71 RVLLVGFG 78 (90)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 88888753
No 138
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain
Probab=94.54 E-value=0.52 Score=42.80 Aligned_cols=116 Identities=16% Similarity=0.119 Sum_probs=77.8
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCC---------------CCCC-HHHHHH----HHhcCcCCCCeeEE
Q 018518 56 DVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVID---------------KSKS-IKTFLM----QIFEKYGNTDIEGV 115 (354)
Q Consensus 56 ~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~---------------~~P~-~a~~l~----~~Lgl~g~~~~~~~ 115 (354)
...-|++.++.+++.+. +++|.+|++|..|+. ..|. .+.-|| ..+.+.-.......
T Consensus 33 ~~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~~~~~t 108 (218)
T PF13723_consen 33 RLSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKNTGPNT 108 (218)
T ss_pred HHHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCCCCceE
Confidence 36789999999988653 578899999987752 2232 122222 22332101345566
Q ss_pred eecCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeeccc---cCCC-CCCccccceeEEEEEccCCC
Q 018518 116 DSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAV---YAEG-PARPTGGAAAVAMLIGPDAP 178 (354)
Q Consensus 116 di~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~~---~~~~-~~~~lfGDGAaA~lL~~~~~ 178 (354)
-+..+=.+|-.||.-|..+++.| . ++||||+.|... |... .......--|.|++|++.+.
T Consensus 109 al~a~~~sf~~aLleA~~~l~~~-~--~~VLlv~~De~~p~~y~~~~~~~~~~~~~A~al~L~~~~~ 172 (218)
T PF13723_consen 109 ALAAGEDSFEAALLEAAAQLAEG-A--EPVLLVCYDEPLPEPYQEFRPERDPPFPYALALVLSPGDS 172 (218)
T ss_pred EEecCcchHHHHHHHHHHHHHcC-C--CCEEEEEeCCCCChhhhhcccccCCCcCEEEEEEecCCCC
Confidence 67788899999999999999999 4 899999999872 3322 12233344788888887654
No 139
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=94.05 E-value=0.21 Score=49.57 Aligned_cols=77 Identities=9% Similarity=-0.044 Sum_probs=45.7
Q ss_pred cccHHHHHHhhCCCcchheeccccEEEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHH
Q 018518 22 CVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLM 101 (354)
Q Consensus 22 ~v~~e~l~~~~~~~~~~~~~gig~r~~~~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~ 101 (354)
++..++.++.++.++.+...|.+... . .+.... .-...|+++||+++|++|+|||.+-+.- .++...-...
T Consensus 265 vl~se~~A~~~~~~p~~~i~g~~~~~--~-~~~~~~-~~~~~a~~~al~~Agl~~~Did~~ei~d-----~f~~~~l~~~ 335 (404)
T PRK06205 265 LVTTEDKAEELGLRPLARLVSWAVAG--V-EPSRMG-IGPVPATEKALARAGLTLDDIDLIELNE-----AFAAQVLAVL 335 (404)
T ss_pred EEecHHHHHHCCCCceEEEEEEEEec--c-CCcccc-ccHHHHHHHHHHHcCCCHHHCCEeeecc-----HHHHHHHHHH
Confidence 35566666666655432223544332 1 111111 2346899999999999999999997432 2334445556
Q ss_pred HHhcCc
Q 018518 102 QIFEKY 107 (354)
Q Consensus 102 ~~Lgl~ 107 (354)
+.||++
T Consensus 336 e~lg~~ 341 (404)
T PRK06205 336 KEWGFG 341 (404)
T ss_pred HHhCcC
Confidence 778873
No 140
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=93.40 E-value=0.29 Score=48.30 Aligned_cols=113 Identities=12% Similarity=0.075 Sum_probs=67.9
Q ss_pred cccHHHHHHhhCCCcc-hheeccccEEEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHH
Q 018518 22 CVLQEALEVHDGVSKG-KYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFL 100 (354)
Q Consensus 22 ~v~~e~l~~~~~~~~~-~~~~gig~r~~~~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l 100 (354)
++..++.++.++.++- |+ .+++... . .+ .+.......|++++|+++|++|+|||++-+.- .+....-..
T Consensus 252 vl~See~A~~l~~~pv~~I-~g~~~~~--~-~~-~~~~~~~~~A~~~al~~Agl~~~DiDv~Ei~d-----aFa~~~l~~ 321 (388)
T PRK06366 252 VMASEKAINEYGLKPIARI-TGYESAS--L-DP-LDFVEAPIPATRKLLEKQNKSIDYYDLVEHNE-----AFSIASIIV 321 (388)
T ss_pred EEecHHHHHHcCCCcCEEE-EEEEEEe--c-CH-HHhcccHHHHHHHHHHHcCCCHHHcceeeccc-----hhHHHHHHH
Confidence 4666677666665444 44 3444432 2 11 11222347899999999999999999987632 234455566
Q ss_pred HHHhcCcCCC-Ce--eEEeecC--cChhHHHHHHHHHHHHHhCCCCCCEEEE
Q 018518 101 MQIFEKYGNT-DI--EGVDSTN--ACYGGTAALFNCVNWVESASWDGRYGLV 147 (354)
Q Consensus 101 ~~~Lgl~g~~-~~--~~~di~~--~C~g~~~aL~~A~~~l~sg~~~~~~vLV 147 (354)
.+.||+.|.+ |. -..-.++ ||+|....+..+.++-+.| +++.|+
T Consensus 322 le~lgl~g~~vN~~GG~la~GHP~GatG~~~~~~l~~qL~~~~---~~~g~~ 370 (388)
T PRK06366 322 RDQLKIDNERFNVNGGAVAIGHPIGNSGSRIIVTLINALKTRH---MKTGLA 370 (388)
T ss_pred HHHhCCCCCccCCCCchhhhCCCcCCCHHHHHHHHHHHHHhcC---CCeEEE
Confidence 7788874311 11 1112233 7888888888887776654 256555
No 141
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=93.36 E-value=0.41 Score=47.53 Aligned_cols=125 Identities=14% Similarity=0.096 Sum_probs=72.1
Q ss_pred cccHHHHHHhhCCCc-chheeccccEEEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHH
Q 018518 22 CVLQEALEVHDGVSK-GKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFL 100 (354)
Q Consensus 22 ~v~~e~l~~~~~~~~-~~~~~gig~r~~~~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l 100 (354)
++..++.++.++..+ -|+. |.+... . .+.... .-...|+++||+++|++++|||++-+. +.++......
T Consensus 267 vl~s~e~A~~~g~~p~a~I~-g~~~~~--~-~~~~~~-~~~~~a~~~al~~AGl~~~DID~~ei~-----daFa~~~l~~ 336 (402)
T PRK08242 267 LIGSEEAGKALGLKPRARIV-ATATIG--S-DPTIML-TGPVPATRKALAKAGLTVDDIDLFELN-----EAFASVVLRF 336 (402)
T ss_pred EEecHHHHHHcCCCCcEEEE-EEEEec--C-Cchhhc-ccHHHHHHHHHHHcCCCHHHCCEEEec-----chhhHHHHHH
Confidence 466777777777543 3443 333321 1 111111 112579999999999999999999853 2334555567
Q ss_pred HHHhcCcCCCCeeEEeecC---------cChhHHHHHHHHHHHHHhCCCCCCEEEEEEeeccccCCCCCCccccceeEEE
Q 018518 101 MQIFEKYGNTDIEGVDSTN---------ACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARPTGGAAAVAM 171 (354)
Q Consensus 101 ~~~Lgl~g~~~~~~~di~~---------~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~~~~~~~~~~lfGDGAaA~ 171 (354)
.+.||+++ . .+.+++ |++|....+..+..+-+.+ +++.|+. -+.-|..+.|+
T Consensus 337 ~e~lG~~~--~--~vN~~GG~la~GHP~GAsG~~~~~~l~~~L~~~~---~~~g~~~------------~c~ggG~g~a~ 397 (402)
T PRK08242 337 MQALDIPH--D--KVNVNGGAIAMGHPLGATGAMILGTVLDELERRG---KRTALIT------------LCVGGGMGIAT 397 (402)
T ss_pred HHHhCCCC--c--CCCcCCCHHhcCCcHHHHHHHHHHHHHHHHHhcC---CCeEEEE------------EcccCCceeEE
Confidence 78899732 1 122222 5666666666666654433 2566552 23445566677
Q ss_pred EEcc
Q 018518 172 LIGP 175 (354)
Q Consensus 172 lL~~ 175 (354)
||++
T Consensus 398 ~~e~ 401 (402)
T PRK08242 398 IIER 401 (402)
T ss_pred EEEe
Confidence 7654
No 142
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=92.56 E-value=0.36 Score=46.82 Aligned_cols=82 Identities=15% Similarity=0.144 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCC-ee-E---EeecC-cChhHHHHHHH
Q 018518 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTD-IE-G---VDSTN-ACYGGTAALFN 130 (354)
Q Consensus 57 ~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~-~~-~---~di~~-~C~g~~~aL~~ 130 (354)
....+.++++++|+++|++++|||.+++....+ .+-..+.+.||+ +++ +. . -++++ +|++...+|..
T Consensus 206 ~~~~~~~~~~~~L~~~gl~~~did~~i~Hq~~~-----~~~~~~~~~lgl--~~ek~~~~~~~~~~GNt~sAsipl~L~~ 278 (345)
T TIGR00748 206 YFHHVVTAAKGLMEKLGLTPEDFDYAVFHQPNG-----KFYLVAARMLGF--PKEQVKPGLLTPRIGNTYSGATPVGLSA 278 (345)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEeCCCCh-----HHHHHHHHHcCC--CHHHeeccccccccCchhhhHHHHHHHH
Confidence 455667899999999999999999999754322 244557899998 332 21 1 14555 88888888877
Q ss_pred HHHHHHhCCCCCCEEEEEE
Q 018518 131 CVNWVESASWDGRYGLVVC 149 (354)
Q Consensus 131 A~~~l~sg~~~~~~vLVV~ 149 (354)
+...++ +++++|+++
T Consensus 279 ~~~~~~----~Gd~vll~~ 293 (345)
T TIGR00748 279 VLDIAE----PGDRILAVS 293 (345)
T ss_pred HHHhcC----CCCEEEEEE
Confidence 765443 457888876
No 143
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=92.44 E-value=1.1 Score=44.27 Aligned_cols=125 Identities=14% Similarity=0.113 Sum_probs=68.0
Q ss_pred cccHHHHHHhhCCCc-chheeccccEEEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHH
Q 018518 22 CVLQEALEVHDGVSK-GKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFL 100 (354)
Q Consensus 22 ~v~~e~l~~~~~~~~-~~~~~gig~r~~~~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l 100 (354)
+|..++.++.++.++ -|+. +.+... ..+. ....-...|++++|+++|++|+|||++-+.-+ ++...-..
T Consensus 252 vl~see~A~~l~~~p~~~i~-g~~~~~---~~~~-~~~~~~~~a~~~al~~agl~~~did~~ei~d~-----F~~~~l~~ 321 (387)
T PRK07850 252 LWMDEDRARALGLRPRARIV-AQALVG---AEPY-YHLDGPVQATAKVLEKAGMKIGDIDLVEINEA-----FASVVLSW 321 (387)
T ss_pred EEecHHHHHHcCCCCcEEEE-EEEEec---cCch-hhcchHHHHHHHHHHHcCCCHHHcCeeeeccc-----chHHHHHH
Confidence 355666666665433 3332 333211 1111 22334578999999999999999999987432 33444444
Q ss_pred HHHhcCcCCCCeeEEeecC---------cChhHHHHHHHHHHHHHhCCCCCCEEEEEEeeccccCCCCCCccccceeEEE
Q 018518 101 MQIFEKYGNTDIEGVDSTN---------ACYGGTAALFNCVNWVESASWDGRYGLVVCTDSAVYAEGPARPTGGAAAVAM 171 (354)
Q Consensus 101 ~~~Lgl~g~~~~~~~di~~---------~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~~~~~~~~~~lfGDGAaA~ 171 (354)
.+.||+. .. .+..++ +|+|...-++.+.++-+.+ +++.|+.. +.-|..+.|+
T Consensus 322 ~e~lg~~--~~--pvN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~~---~~~g~~~~------------c~~gg~g~a~ 382 (387)
T PRK07850 322 AQVHEPD--MD--KVNVNGGAIALGHPVGSTGARLITTALHELERTD---KSTALITM------------CAGGALSTGT 382 (387)
T ss_pred HHHcCCC--CC--CcCCCCchhhcCCCcchhHHHHHHHHHHHHHhcC---CCeEEEEE------------ccccCceeEE
Confidence 5778761 11 233222 4555555555555554433 36666531 2345555666
Q ss_pred EEcc
Q 018518 172 LIGP 175 (354)
Q Consensus 172 lL~~ 175 (354)
||++
T Consensus 383 ~~e~ 386 (387)
T PRK07850 383 IIER 386 (387)
T ss_pred EEEe
Confidence 6653
No 144
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=92.40 E-value=0.68 Score=47.34 Aligned_cols=120 Identities=16% Similarity=0.021 Sum_probs=67.5
Q ss_pred cccHHHHHHhhCCCcc-hh-eeccccEEE--eecC-CCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCH
Q 018518 22 CVLQEALEVHDGVSKG-KY-TVGLGQDCM--AFCS-EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSI 96 (354)
Q Consensus 22 ~v~~e~l~~~~~~~~~-~~-~~gig~r~~--~~~~-~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~ 96 (354)
+++.++.++.++.+.+ ++ ..|.+..+- .+.. ++-........|+++|++.+|++++|||++-+.+|. |..
T Consensus 250 il~S~e~A~~l~~~~~~~V~i~g~a~~~~~~~~~~r~~~~~~~~~~~aa~~a~~~AGi~~~Did~~elydcF-----~~~ 324 (498)
T PRK08257 250 LLTSVAKARRLGVPEDRWVYLHGGADAHDPYDILERPDLHRSPAIRAAGRRALALAGLGIDDIDAFDLYSCF-----PSA 324 (498)
T ss_pred EEeeHHHHHhcCCCCCceEEEEEEEEeeCccccccccccccChHHHHHHHHHHHHhCCCHHHCCEEEeccCC-----HHH
Confidence 5777777777776533 32 234443321 1111 111122334579999999999999999999886653 444
Q ss_pred HHHHHHHhcCcCCCCeeEEeecCcC-----hh---HHHHHHHHHHHHHhCCCCCCEEEEEE
Q 018518 97 KTFLMQIFEKYGNTDIEGVDSTNAC-----YG---GTAALFNCVNWVESASWDGRYGLVVC 149 (354)
Q Consensus 97 a~~l~~~Lgl~g~~~~~~~di~~~C-----~g---~~~aL~~A~~~l~sg~~~~~~vLVV~ 149 (354)
.....+.||++++ +-..+.+++|. .+ ++..+..+...|+.. +.+++|+.+
T Consensus 325 ~~~~~E~LGl~~~-g~~pvN~sGGl~s~G~P~~a~g~~~i~E~v~QLRg~--~~~~gLv~~ 382 (498)
T PRK08257 325 VQVAARELGLDLD-DPRPLTVTGGLPFFGGPGNNYVTHAIAEMVERLRAN--PGRRGLVTA 382 (498)
T ss_pred HHHHHHHcCcCCC-CCCCcCCCcChhhcCCchhhHHHHHHHHHHHHHhhc--CCCEEEEEC
Confidence 4556789999532 21233443322 23 333444455555544 347777754
No 145
>PRK09051 beta-ketothiolase; Provisional
Probab=92.32 E-value=0.63 Score=46.10 Aligned_cols=41 Identities=7% Similarity=0.086 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcC
Q 018518 61 SLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK 106 (354)
Q Consensus 61 a~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl 106 (354)
...|++++|+++|++|+|||++-+.- ..+.......+.||+
T Consensus 294 ~~~a~~~al~~agi~~~did~~ei~d-----~f~~~~~~~~e~lg~ 334 (394)
T PRK09051 294 PVPATQKALERAGLTVADLDVIEANE-----AFAAQACAVTRELGL 334 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecC-----ccHHHHHHHHHHhCC
Confidence 46899999999999999999997632 234455566788997
No 146
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=92.25 E-value=0.44 Score=47.16 Aligned_cols=80 Identities=13% Similarity=0.224 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCC-CCee--EEeecC--cChhHHHHHHHHHHH
Q 018518 60 MSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGN-TDIE--GVDSTN--ACYGGTAALFNCVNW 134 (354)
Q Consensus 60 La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~-~~~~--~~di~~--~C~g~~~aL~~A~~~ 134 (354)
-...|+++||+++|++|+|||++-+.- .++...-...+.||++.. -+.. ..-.++ |++|....++.+.++
T Consensus 290 ~~~~a~~~al~~agl~~~did~~ei~d-----~f~~~~l~~~e~lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~el~~qL 364 (391)
T PRK07661 290 GPIAAIPKALKLAGLELSDIGLFELNE-----AFASQSIQVIRELGLDEEKVNVNGGAIALGHPLGCTGAKLTLSLIHEM 364 (391)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEeCC-----HHHHHHHHHHHHcCCCCCCCCCCCChHHhCCcHHHHHHHHHHHHHHHH
Confidence 447899999999999999999998422 233334444567887321 1111 111222 666666666666666
Q ss_pred HHhCCCCCCEEEE
Q 018518 135 VESASWDGRYGLV 147 (354)
Q Consensus 135 l~sg~~~~~~vLV 147 (354)
-+.| +++.|+
T Consensus 365 ~~~~---~~~g~~ 374 (391)
T PRK07661 365 KRRN---EQFGIV 374 (391)
T ss_pred HhcC---CCeEEE
Confidence 5544 255555
No 147
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=92.03 E-value=0.38 Score=46.82 Aligned_cols=90 Identities=11% Similarity=-0.062 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEE-ecccCCCCCCCHHHHHHHHhcCcCCCCeeEEe----ecC-cChhHHHHHHHHHH
Q 018518 60 MSLTVVTSLLEKYKIDPTQIGRLEV-GSETVIDKSKSIKTFLMQIFEKYGNTDIEGVD----STN-ACYGGTAALFNCVN 133 (354)
Q Consensus 60 La~~Aa~~aL~~ag~~~~dId~li~-~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~d----i~~-~C~g~~~aL~~A~~ 133 (354)
=..++.+++|+++|++|+|||.|+. +|.++. ....-+..+.+.+|-. ....+... +++ +.+++...+..+..
T Consensus 235 gl~~ai~~AL~~agl~~~dId~v~ah~~gt~~-~d~~e~~A~~~~f~~~-~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~ 312 (348)
T PRK06147 235 GLTQAIRAALAEAGCGLEDMDYRIADLNGEQY-RFKEAALAEMRLFRVR-KEFFDLWHPAECIGEIGAAIGPALLGVALA 312 (348)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEcCCCCCcc-chHHHHHHHHHHhhhc-cCCCceecchHhhcchHHHHHHHHHHHHHH
Confidence 3468999999999999999999984 333332 1122223344444421 01111211 232 44555555556666
Q ss_pred HHHhCCCCCCEEEEEEee
Q 018518 134 WVESASWDGRYGLVVCTD 151 (354)
Q Consensus 134 ~l~sg~~~~~~vLVV~~e 151 (354)
.++.|..|+.++||.+++
T Consensus 313 ~~~~g~~~g~~~L~~s~~ 330 (348)
T PRK06147 313 ASRKGYGPGPNVLCHLSD 330 (348)
T ss_pred HHHcCcCCCCcEEEEecC
Confidence 677776677889998764
No 148
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=91.78 E-value=1.1 Score=43.90 Aligned_cols=85 Identities=13% Similarity=0.151 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHh-----cCcCCCC-ee-EE-eecC-cChhHHHHHH
Q 018518 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIF-----EKYGNTD-IE-GV-DSTN-ACYGGTAALF 129 (354)
Q Consensus 59 ~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~L-----gl~g~~~-~~-~~-di~~-~C~g~~~aL~ 129 (354)
+...++.+++|+++|+.++|||.++....+ +.+-..+.++| |+ +++ +. .+ ++++ +|++...+|.
T Consensus 272 ~~~~~~i~~~L~~~gl~~~DId~~v~Hq~n-----~~~~~~v~~~l~~~~~gl--~~~k~~~~~~~~GNt~sAsipi~L~ 344 (378)
T PRK06816 272 VYTIKPLLELVDKRNLDPDDIDYFLPHYSS-----EYFREKIVELLAKAGFMI--PEEKWFTNLATVGNTGSASIYIMLD 344 (378)
T ss_pred HHHHHHHHHHHHHcCCChhhCCEEeeCccc-----HHHHHHHHHHHHhccCCC--ChhheEEeccccccccchHHHHHHH
Confidence 344788899999999999999999864332 33345667776 77 332 21 22 2444 7788888887
Q ss_pred HHHHHHHhCCC-CCCEEEEEEeecc
Q 018518 130 NCVNWVESASW-DGRYGLVVCTDSA 153 (354)
Q Consensus 130 ~A~~~l~sg~~-~~~~vLVV~~e~~ 153 (354)
.+ ++.|.. +++++++++.+..
T Consensus 345 ~a---~~~g~~~~Gd~vl~~~~~s~ 366 (378)
T PRK06816 345 EL---LNSGRLKPGQKILCFVPESG 366 (378)
T ss_pred HH---HHcCCCCCCCEEEEEEeccc
Confidence 66 344432 5688988887764
No 149
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=91.63 E-value=0.7 Score=38.06 Aligned_cols=79 Identities=15% Similarity=0.214 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcC---CCCeeEEeecC--cChhHHHHHHHHHHHH
Q 018518 61 SLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYG---NTDIEGVDSTN--ACYGGTAALFNCVNWV 135 (354)
Q Consensus 61 a~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g---~~~~~~~di~~--~C~g~~~aL~~A~~~l 135 (354)
...|++++|+++|++++|||.+-+.-. +-...-...+.||+.. +++=-++-+++ ||+|...-+..+..+-
T Consensus 24 p~~A~~~al~~ag~~~~did~~Ei~Ea-----FA~~~l~~~~~lg~~~~~vN~~GG~la~GHP~gasG~r~~~~l~~~L~ 98 (123)
T PF02803_consen 24 PVPAARKALERAGLTPDDIDVIEINEA-----FAAQVLAFLEALGLDPEKVNPNGGALALGHPLGASGARLVVELAHQLR 98 (123)
T ss_dssp HHHHHHHHHHHHT--GGGESEEEE--S-----BHHHHHHHHHHHTTGGGGBSTT--HHHH-BHTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCccccchhhccch-----hhhHHHHhhccccccccccCcccccccccccccccccchhhhhHHHHH
Confidence 468999999999999999999977432 3455566788888721 01101111223 7888888888777776
Q ss_pred HhCCCCCCEEEE
Q 018518 136 ESASWDGRYGLV 147 (354)
Q Consensus 136 ~sg~~~~~~vLV 147 (354)
+.+ +++.|+
T Consensus 99 ~~~---~~~gla 107 (123)
T PF02803_consen 99 RRG---GRYGLA 107 (123)
T ss_dssp HHT---TSEEEE
T ss_pred Hhc---hhhhhH
Confidence 655 255554
No 150
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=91.59 E-value=0.93 Score=45.03 Aligned_cols=93 Identities=15% Similarity=0.160 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecC---------cChhHHHHHHHH
Q 018518 61 SLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTN---------ACYGGTAALFNC 131 (354)
Q Consensus 61 a~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~---------~C~g~~~aL~~A 131 (354)
...|++++|+++|++|+|||++-+. | .+........+.||++ .+...+..++ |++|...-+..+
T Consensus 298 ~~~A~~~al~~AGl~~~DID~iei~----d-afa~~~l~~~e~lg~~--~~~~pvN~~GG~la~GHp~gasG~~~v~e~~ 370 (400)
T PRK13359 298 PAPATQKLLARLGMTLDQFDVIELN----E-AFASQGLAVLRELGLA--DDDARVNPNGGAIALGHPLGASGARLVTTAL 370 (400)
T ss_pred HHHHHHHHHHHhCCCHHHcCcCccC----c-HhHHHHHHHHHHcCCC--CCCCCEECCCchhhcCCchhHHHHHHHHHHH
Confidence 4689999999999999999998732 2 2334455567788873 2222333333 344444444444
Q ss_pred HHHHHhCCCCCCEEEEEEeeccccCCCCCCccccceeEEEEEcc
Q 018518 132 VNWVESASWDGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIGP 175 (354)
Q Consensus 132 ~~~l~sg~~~~~~vLVV~~e~~~~~~~~~~~lfGDGAaA~lL~~ 175 (354)
.++-.. .+++.|+.. +.-|..+.|+||++
T Consensus 371 ~qL~~~---~~~~g~~~~------------c~~gG~g~a~~ie~ 399 (400)
T PRK13359 371 YQLERT---GGRFALCTM------------CIGVGQGIAIAIER 399 (400)
T ss_pred HHHhhc---CCCeEEEEE------------cccCCceeEEEEEe
Confidence 444332 236665532 23345556666653
No 151
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=91.44 E-value=0.68 Score=44.14 Aligned_cols=80 Identities=16% Similarity=-0.019 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEe---ecC-cChhHHHHHHHHHHHHH
Q 018518 61 SLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVD---STN-ACYGGTAALFNCVNWVE 136 (354)
Q Consensus 61 a~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~d---i~~-~C~g~~~aL~~A~~~l~ 136 (354)
..++.+++|+++|++++|||.+++.... +.+-..+.++||+ ++...... +++ +|++...+|. .+++
T Consensus 227 ~~~~i~~~L~~~g~~~~did~~~~h~~~-----~~~~~~~~~~lg~--~~~~~~~~~~~~Gn~~sas~~~~L~---~~~~ 296 (325)
T PRK12879 227 MPKGARQVLEKAGLTKDDIDWVIPHQAN-----LRIIESLCEKLGI--PMEKTLVSVEYYGNTSAATIPLALD---LALE 296 (325)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECCCC-----HHHHHHHHHHcCC--CHHHhhhhHhhhCchHHHHHHHHHH---HHHH
Confidence 3567889999999999999999986432 3445678999998 33221112 233 5555555664 4455
Q ss_pred hCCC-CCCEEEEEEe
Q 018518 137 SASW-DGRYGLVVCT 150 (354)
Q Consensus 137 sg~~-~~~~vLVV~~ 150 (354)
.|.. +++++|+++.
T Consensus 297 ~g~~~~Gd~vll~~~ 311 (325)
T PRK12879 297 QGKIKPGDTLLLYGF 311 (325)
T ss_pred cCCCCCCCEEEEEEE
Confidence 5532 5678888763
No 152
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=91.40 E-value=0.99 Score=44.46 Aligned_cols=42 Identities=7% Similarity=0.080 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcC
Q 018518 60 MSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK 106 (354)
Q Consensus 60 La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl 106 (354)
-...|+++|++++|++|+|||.+-+.- ..+.......+.||+
T Consensus 286 ~~~~a~~~a~~~Agi~~~did~~e~~d-----~f~~~~~~~~e~lg~ 327 (386)
T cd00751 286 GPVPAIPKALKRAGLTLDDIDLIEINE-----AFAAQALACLKELGL 327 (386)
T ss_pred hHHHHHHHHHHHcCCCHHHcCEEEeec-----hhHHHHHHHHHHhCC
Confidence 346899999999999999999987631 223334455677887
No 153
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=91.34 E-value=0.83 Score=45.35 Aligned_cols=96 Identities=9% Similarity=0.105 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCC-CeeE--EeecC--cChhHHHHHHHHHHH
Q 018518 60 MSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT-DIEG--VDSTN--ACYGGTAALFNCVNW 134 (354)
Q Consensus 60 La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~-~~~~--~di~~--~C~g~~~aL~~A~~~ 134 (354)
-...|+++||+++|++|+|||++-+. | .+........+.||++..+ +... .-.++ |++|....+..+.++
T Consensus 298 ~~~~A~~~al~~Agi~~~did~~ei~----D-~f~~~~l~~~e~lg~~~~~vN~~GG~la~GHp~gasG~~~~~~~~~~L 372 (399)
T PRK09052 298 GPIEAIPAALKQAGLKQDDLDWIELN----E-AFAAQSLAVIRDLGLDPSKVNPLGGAIALGHPLGATGAIRTATVVHGL 372 (399)
T ss_pred hHHHHHHHHHHHcCCCHHHcCEEEeC----c-HHHHHHHHHHHHhCCCCcccCCCCchhhcCchHHHHHHHHHHHHHHHH
Confidence 44789999999999999999999732 2 2334455566788873211 1110 11122 666666666666666
Q ss_pred HHhCCCCCCEEEEEEeeccccCCCCCCccccceeEEEEEcc
Q 018518 135 VESASWDGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIGP 175 (354)
Q Consensus 135 l~sg~~~~~~vLVV~~e~~~~~~~~~~~lfGDGAaA~lL~~ 175 (354)
-..+ +++.|+. .+.-|-.+.|+||++
T Consensus 373 ~~~~---~~~g~~~------------~c~~gg~g~a~~~e~ 398 (399)
T PRK09052 373 RRTN---LKYGMVT------------MCVGTGMGAAGIFER 398 (399)
T ss_pred HhcC---CCeEEEE------------EcccCCceeEEEEEe
Confidence 5443 2555542 223445556666653
No 154
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=91.04 E-value=0.63 Score=44.56 Aligned_cols=80 Identities=11% Similarity=0.040 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEe---ecC-cChhHHHHHHHHHHHH
Q 018518 60 MSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVD---STN-ACYGGTAALFNCVNWV 135 (354)
Q Consensus 60 La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~d---i~~-~C~g~~~aL~~A~~~l 135 (354)
...++.+++|+++|++++|||.+++..... ..-..+++.||+ ++...... +++ +|++...+|. .++
T Consensus 231 ~~~~~i~~~L~~~gl~~~did~~~~H~~~~-----~~~~~i~~~l~l--~~e~~~~~~~~~Gn~~sas~~~~L~---~~~ 300 (329)
T PRK07204 231 YLMKFIDKLLMDAGYTLADIDLIVPHQASG-----PAMRLIRKKLGV--DEERFVTIFEDHGNMIAASIPVALF---EAI 300 (329)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEeCCCCH-----HHHHHHHHHcCC--CHHHhhhhHhhhCcHHHHHHHHHHH---HHH
Confidence 355788999999999999999999754332 234578999999 43322212 233 4444444554 345
Q ss_pred HhCCC-CCCEEEEEE
Q 018518 136 ESASW-DGRYGLVVC 149 (354)
Q Consensus 136 ~sg~~-~~~~vLVV~ 149 (354)
+.|.. +++++|+++
T Consensus 301 ~~g~~~~Gd~vll~~ 315 (329)
T PRK07204 301 KQKKVQRGNKILLLG 315 (329)
T ss_pred HcCCCCCCCEEEEEE
Confidence 55532 567788775
No 155
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=90.96 E-value=0.82 Score=45.28 Aligned_cols=72 Identities=14% Similarity=0.069 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCC-CCeeE--EeecC--cChhHHHHHHHHHHH
Q 018518 60 MSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGN-TDIEG--VDSTN--ACYGGTAALFNCVNW 134 (354)
Q Consensus 60 La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~-~~~~~--~di~~--~C~g~~~aL~~A~~~ 134 (354)
....|+++||+++|++|+|||++-+ .+ .++...-...+.||++.. -++.. .-.++ ||+|....+..+.++
T Consensus 292 ~~~~a~~~al~~agl~~~did~~e~----~d-~f~~~~l~~~e~lg~~~~pvN~~GG~la~Ghp~gasG~~~~~~l~~qL 366 (393)
T PRK08235 292 TPGYAINALLEKTGKTVEDIDLFEI----NE-AFAAVALASTEIAGIDPEKVNVNGGAVALGHPIGASGARIIVTLIHEL 366 (393)
T ss_pred hHHHHHHHHHHHhCCCHHHCCeehh----cc-hhHHHHHHHHHHhCCCcccCCcCCchHHhCCcHHHHHHHHHHHHHHHH
Confidence 3468999999999999999999953 22 334455566788897321 01111 11122 566666666666665
Q ss_pred HH
Q 018518 135 VE 136 (354)
Q Consensus 135 l~ 136 (354)
-.
T Consensus 367 ~~ 368 (393)
T PRK08235 367 KR 368 (393)
T ss_pred Hh
Confidence 43
No 156
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=90.82 E-value=0.78 Score=43.96 Aligned_cols=79 Identities=11% Similarity=0.063 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEee---cC-cChhHHHHHHHHHHHHH
Q 018518 61 SLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDS---TN-ACYGGTAALFNCVNWVE 136 (354)
Q Consensus 61 a~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di---~~-~C~g~~~aL~~A~~~l~ 136 (354)
..++++++|+++|++++|||++++.... +..-..+.+.||+ +++-....+ ++ +|++...+|..+ ++
T Consensus 228 ~~~~i~~~L~~~g~~~~did~~~~hq~~-----~~~~~~~~~~lgl--~~~k~~~~l~~~Gn~~sasi~~~L~~~---~~ 297 (326)
T CHL00203 228 VPAVIIKCLNALNISIDEVDWFILHQAN-----KRILEAIANRLSV--PNSKMITNLEKYGNTSAASIPLALDEA---IQ 297 (326)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECCCC-----HHHHHHHHHHhCC--CHHHhhhHHHhhCcHHHHHHHHHHHHH---HH
Confidence 4557899999999999999999875432 2344568999999 433222222 23 555555555544 45
Q ss_pred hCCC-CCCEEEEEE
Q 018518 137 SASW-DGRYGLVVC 149 (354)
Q Consensus 137 sg~~-~~~~vLVV~ 149 (354)
.|.. +++++|+++
T Consensus 298 ~g~~~~Gd~vll~~ 311 (326)
T CHL00203 298 NNKIQPGQIIVLSG 311 (326)
T ss_pred hCCCCCCCEEEEEE
Confidence 5432 567888776
No 157
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=90.66 E-value=1.4 Score=43.81 Aligned_cols=42 Identities=10% Similarity=0.072 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCc
Q 018518 61 SLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKY 107 (354)
Q Consensus 61 a~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~ 107 (354)
...|++++|+++|++|+|||++-+. | ..+.......+.||++
T Consensus 299 ~~~a~~~al~~Agl~~~DId~~ei~----D-~f~~~~l~~~e~lg~~ 340 (401)
T PRK09050 299 PAPATRKLLARLGLTIDQFDVIELN----E-AFAAQGLAVLRQLGLA 340 (401)
T ss_pred HHHHHHHHHHHcCCCHHHCCccccC----c-HhHHHHHHHHHHcCCC
Confidence 4689999999999999999998732 2 2344455567888983
No 158
>PRK05790 putative acyltransferase; Provisional
Probab=90.49 E-value=1.6 Score=43.04 Aligned_cols=80 Identities=10% Similarity=0.062 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcC-CCCeeEEe--ec--CcChhHHHHHHHHHHHH
Q 018518 61 SLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYG-NTDIEGVD--ST--NACYGGTAALFNCVNWV 135 (354)
Q Consensus 61 a~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g-~~~~~~~d--i~--~~C~g~~~aL~~A~~~l 135 (354)
...|+++||+++|++|+|||.+-+. | ..........+.||++. +-++..-- .+ .|++|...-++.+.++-
T Consensus 293 ~~~a~~~a~~~Agi~~~did~~e~~----d-~f~~~~l~~~e~lg~~~~pvN~~GG~l~~Ghp~gatG~~~~~e~~~qL~ 367 (393)
T PRK05790 293 PVPAIRKALEKAGWSLADLDLIEIN----E-AFAAQALAVEKELGLDPEKVNVNGGAIALGHPIGASGARILVTLLHEMK 367 (393)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeC----c-HHHHHHHHHHHHhCCChhhcCCCcchhhhCcchhhhHHHHHHHHHHHHH
Confidence 4579999999999999999999742 2 23344455667888731 11111111 12 25555555555555544
Q ss_pred HhCCCCCCEEEEE
Q 018518 136 ESASWDGRYGLVV 148 (354)
Q Consensus 136 ~sg~~~~~~vLVV 148 (354)
..+ .+++|+-
T Consensus 368 ~~~---~~~gl~~ 377 (393)
T PRK05790 368 RRG---AKKGLAT 377 (393)
T ss_pred hcC---CCeEEEE
Confidence 322 3666653
No 159
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=90.43 E-value=1 Score=44.68 Aligned_cols=42 Identities=10% Similarity=0.083 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCc
Q 018518 61 SLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKY 107 (354)
Q Consensus 61 a~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~ 107 (354)
...|+++||+++|++|+|||++-+. | .++.......+.||++
T Consensus 298 ~~~a~~~al~~Agl~~~DID~~ei~----D-~f~~~~l~~~e~lG~~ 339 (400)
T TIGR02430 298 PVPATQKLLARAGLSIDQFDVIELN----E-AFAAQALAVLRELGLA 339 (400)
T ss_pred HHHHHHHHHHHhCCCHHHCCCcccC----c-HHHHHHHHHHHHcCCC
Confidence 4689999999999999999998732 2 2344555667889983
No 160
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=90.34 E-value=0.68 Score=46.04 Aligned_cols=79 Identities=9% Similarity=-0.015 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcC-CCC----eeEEeecCcChhHHHHHHHHHHHH
Q 018518 61 SLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYG-NTD----IEGVDSTNACYGGTAALFNCVNWV 135 (354)
Q Consensus 61 a~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g-~~~----~~~~di~~~C~g~~~aL~~A~~~l 135 (354)
...|+++||+++|++|+|||++-+ -+ ..+...-.-.+.||+++ +.+ ..++---.||+|....+....++-
T Consensus 305 ~~~a~~~al~~Agi~~~did~~ei----~d-~f~~~~l~~le~lg~~~~pvN~~GG~l~~Ghp~gasg~~~~~~~~~qL~ 379 (406)
T PRK07851 305 PVEASKQALARAGMSIDDIDLVEI----NE-AFAAQVLPSARELGIDEDKLNVSGGAIALGHPFGMTGARITTTLLNNLQ 379 (406)
T ss_pred HHHHHHHHHHHhCCCHHHCCeehh----hh-HHHHHHHHHHHHhCCCccccCCCCChHhhcCcHHHHHHHHHHHHHHHHH
Confidence 468999999999999999999943 11 22333334457788732 111 111111125555565555555554
Q ss_pred HhCCCCCCEEEE
Q 018518 136 ESASWDGRYGLV 147 (354)
Q Consensus 136 ~sg~~~~~~vLV 147 (354)
+.+ +++.|+
T Consensus 380 ~~~---~~~g~~ 388 (406)
T PRK07851 380 THD---KTFGLE 388 (406)
T ss_pred hcC---CCeEEE
Confidence 432 366655
No 161
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=90.27 E-value=1.7 Score=43.00 Aligned_cols=41 Identities=7% Similarity=0.018 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcC
Q 018518 61 SLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK 106 (354)
Q Consensus 61 a~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl 106 (354)
...|++++|+++|++|+|||++-+.- ..+.......+.||+
T Consensus 293 ~~~a~~~al~~agl~~~dId~~e~~d-----~f~~~~~~~~e~lg~ 333 (393)
T PRK05656 293 PVSATRRCLDKAGWSLAELDLIEANE-----AFAAQSLAVGKELGW 333 (393)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecC-----ccHHHHHHHHHHhCC
Confidence 35899999999999999999998632 234445556778887
No 162
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=89.97 E-value=1.4 Score=42.38 Aligned_cols=82 Identities=9% Similarity=0.010 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeE--Ee-ecC-cChhHHHHHHHHHHH
Q 018518 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEG--VD-STN-ACYGGTAALFNCVNW 134 (354)
Q Consensus 59 ~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~--~d-i~~-~C~g~~~aL~~A~~~ 134 (354)
....++.+++|+++|++++|||.+++.... +..-..+.+.||+ ++.-.. ++ +++ ++++...+|..+
T Consensus 239 ~~~~~~~~~~L~~~g~~~~did~~i~H~~~-----~~~~~~~~~~lgl--~~~k~~~~~~~~GN~~sas~~~~L~~~--- 308 (338)
T PRK09258 239 ELAVDTWEAFLAQLGWAVEQVDRVICHQVG-----AAHTRAILKALGI--DPEKVFTTFPTLGNMGPASLPITLAMA--- 308 (338)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEecCCCC-----HHHHHHHHHHhCC--CHHHceehHhhhCCcHHhHHHHHHHHH---
Confidence 455678889999999999999999875432 2344578889999 432222 22 233 555555565544
Q ss_pred HHhCCC-CCCEEEEEEe
Q 018518 135 VESASW-DGRYGLVVCT 150 (354)
Q Consensus 135 l~sg~~-~~~~vLVV~~ 150 (354)
++.|.. +++++|+++.
T Consensus 309 ~~~g~~~~Gd~vll~~~ 325 (338)
T PRK09258 309 AEEGFLKPGDRVALLGI 325 (338)
T ss_pred HHhCCCCCCCEEEEEEe
Confidence 444432 5678888764
No 163
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=89.72 E-value=2.6 Score=41.30 Aligned_cols=76 Identities=12% Similarity=0.101 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeec---------CcChhHHHHHHH
Q 018518 60 MSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST---------NACYGGTAALFN 130 (354)
Q Consensus 60 La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~---------~~C~g~~~aL~~ 130 (354)
-...|++++|+++|++++|||.+.+.- ..........+.||++ .. .+..+ .|++|.......
T Consensus 259 ~~~~a~~~al~~Agl~~~Did~~ei~e-----afa~~~~~~~e~lgl~--~~--~vn~~GG~la~Ghp~GatG~~~~~~~ 329 (361)
T PRK06690 259 GPIFAVNKLLNEMNMKVEDIDYFEINE-----AFASKVVACAKELQIP--YE--KLNVNGGAIALGHPYGASGAMLVTRL 329 (361)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEeeecc-----hhHHHHHHHHHhcCCC--ch--hcccCCcHHhccCchhhhHHHHHHHH
Confidence 457899999999999999999997632 2344555667888882 21 22222 377777777777
Q ss_pred HHHHHHhCCCCCCEEEE
Q 018518 131 CVNWVESASWDGRYGLV 147 (354)
Q Consensus 131 A~~~l~sg~~~~~~vLV 147 (354)
..++-+.| +++.++
T Consensus 330 ~~ql~~~~---~~~g~~ 343 (361)
T PRK06690 330 FYQAKRED---MKYGIA 343 (361)
T ss_pred HHHHHHhC---CCEEEE
Confidence 77776554 255554
No 164
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=89.54 E-value=1.6 Score=41.57 Aligned_cols=77 Identities=12% Similarity=-0.064 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeE----EeecC-cChhHHHHHHHHHH
Q 018518 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEG----VDSTN-ACYGGTAALFNCVN 133 (354)
Q Consensus 59 ~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~----~di~~-~C~g~~~aL~~A~~ 133 (354)
+...++++++|+++|+.++|||.+++.........+-....+....+. ..... -.+++ ++++++..|..+..
T Consensus 205 ~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~---~~~~~~~~~~~~G~~~aas~~~~l~~~~~ 281 (332)
T cd00825 205 EGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGD---KSPAVSATKAMTGNLSSAAVVLAVDEAVL 281 (332)
T ss_pred HHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCC---CCceeECCCcccccchhHhHHHHHHHHHH
Confidence 455689999999999999999999976544332222222222233332 11121 23444 67777777777777
Q ss_pred HHHhC
Q 018518 134 WVESA 138 (354)
Q Consensus 134 ~l~sg 138 (354)
.++.+
T Consensus 282 ~~~~~ 286 (332)
T cd00825 282 MLEHG 286 (332)
T ss_pred HHhcC
Confidence 66655
No 165
>PLN02287 3-ketoacyl-CoA thiolase
Probab=89.49 E-value=1.7 Score=43.84 Aligned_cols=99 Identities=10% Similarity=0.120 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCC-Cee--EEeecC--cChhHHHHHHHHHHHH
Q 018518 61 SLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT-DIE--GVDSTN--ACYGGTAALFNCVNWV 135 (354)
Q Consensus 61 a~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~-~~~--~~di~~--~C~g~~~aL~~A~~~l 135 (354)
...|+++||+++|++|+|||++-+. + .+........+.||++..+ +.. ..-+++ ||+|....+..+.++-
T Consensus 333 ~~~A~~~al~~Agl~~~DID~~Ei~----d-aFa~~~l~~~e~lG~~~~pvN~sGG~la~GHp~gAsG~~~v~~l~~qL~ 407 (452)
T PLN02287 333 PAVAIPAAVKAAGLELDDIDLFEIN----E-AFASQFVYCCKKLGLDPEKVNVNGGAIALGHPLGATGARCVATLLHEMK 407 (452)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEec----c-hHHHHHHHHHHHcCCCccccCCCCcHHhccCcHHHHHHHHHHHHHHHHH
Confidence 4689999999999999999999543 2 2233333445778873210 111 111222 6666666666666665
Q ss_pred HhCCCCCCEEEEEEeeccccCCCCCCccccceeEEEEEccCC
Q 018518 136 ESASWDGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIGPDA 177 (354)
Q Consensus 136 ~sg~~~~~~vLVV~~e~~~~~~~~~~~lfGDGAaA~lL~~~~ 177 (354)
+.+. ..++.|+. -+.-|--+.|+||++-+
T Consensus 408 ~~~~-~~~~gl~~------------~c~ggG~g~a~~ie~~~ 436 (452)
T PLN02287 408 RRGK-DCRFGVVS------------MCIGTGMGAAAVFERGD 436 (452)
T ss_pred hcCC-CCCeeEEE------------EccccCceeEEEEEecC
Confidence 5442 01455542 23345556678887654
No 166
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=89.37 E-value=1.3 Score=42.37 Aligned_cols=83 Identities=12% Similarity=0.037 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEe---ecC-cChhHHHHHHHHHH
Q 018518 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVD---STN-ACYGGTAALFNCVN 133 (354)
Q Consensus 58 ~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~d---i~~-~C~g~~~aL~~A~~ 133 (354)
.+...++.+++|+++|++++|||.+++.... +.+-..+.++||+ ++.-.... .++ ++++...+|..
T Consensus 226 ~~~~~~~~~~~L~~~gl~~~did~~~~h~~~-----~~~~~~~~~~l~l--~~~k~~~~l~~~Gn~~sas~~~~L~~--- 295 (326)
T PRK05963 226 VRMMSGASQNVLASAAMTPQDIDRFFPHQAN-----ARIVDKVCETIGI--PRAKAASTLETYGNSSAATIPLSLSL--- 295 (326)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEeCCCC-----HHHHHHHHHHcCC--CHHHhhhhHHhhCcHHHHHHHHHHHH---
Confidence 3445678889999999999999999884322 4455668899999 33322212 222 44455555543
Q ss_pred HHHhCCC-CCCEEEEEEe
Q 018518 134 WVESASW-DGRYGLVVCT 150 (354)
Q Consensus 134 ~l~sg~~-~~~~vLVV~~ 150 (354)
+++.+.. +++++|+++.
T Consensus 296 ~~~~~~~~~Gd~vll~~~ 313 (326)
T PRK05963 296 ANLEQPLREGERLLFAAA 313 (326)
T ss_pred HHHhCCCCCCCEEEEEEE
Confidence 3444422 5678888764
No 167
>PRK06840 hypothetical protein; Validated
Probab=88.99 E-value=1.8 Score=41.64 Aligned_cols=81 Identities=19% Similarity=0.158 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCC-CeeEEe-ecC-cChhHHHHHHHHHHHHH
Q 018518 60 MSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT-DIEGVD-STN-ACYGGTAALFNCVNWVE 136 (354)
Q Consensus 60 La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~-~~~~~d-i~~-~C~g~~~aL~~A~~~l~ 136 (354)
...++.+++|+++|++++|||.+++.... +.+-..++++||+ ++ ....++ +++ +|++....|. .+++
T Consensus 238 ~~~~~i~~~L~~~gl~~~did~~~~h~~~-----~~~~~~~~~~Lgl--~~~~~~~~~~~Gn~~sas~~~~L~---~~~~ 307 (339)
T PRK06840 238 NFLKVIREALRKSGYTPKDIDYLAILHMK-----RSAHIALLEGLGL--TEEQAIYLDEYGHLGQLDQILSLH---LALE 307 (339)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEECCcC-----HHHHHHHHHHcCC--CHHHeEeHHhccchhhhhHHHHHH---HHHH
Confidence 34588999999999999999998864321 3334568899999 33 222222 333 4445455554 4455
Q ss_pred hCCC-CCCEEEEEEe
Q 018518 137 SASW-DGRYGLVVCT 150 (354)
Q Consensus 137 sg~~-~~~~vLVV~~ 150 (354)
++.. +++++|+++.
T Consensus 308 ~~~~~~Gd~ill~~~ 322 (339)
T PRK06840 308 QGKLKDGDLVVLVSA 322 (339)
T ss_pred cCCCCCCCEEEEEEE
Confidence 5532 5677887763
No 168
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=88.86 E-value=0.98 Score=44.72 Aligned_cols=76 Identities=11% Similarity=0.071 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecC---------cChhHHHHHHH
Q 018518 60 MSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTN---------ACYGGTAALFN 130 (354)
Q Consensus 60 La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~---------~C~g~~~aL~~ 130 (354)
-...|+++||+++|++|+|||++-+. + ..........+.||++. ..+.+++ |++|....+..
T Consensus 291 ~~~~a~~~al~~agl~~~Did~~ei~----e-afa~~~l~~~e~lg~~~----~~vN~~GG~~a~GHp~gatG~r~~~~l 361 (392)
T PRK07108 291 GPVFAVPKLLKQAGLKVDDIDLWELN----E-AFAVQVLYCRDTLGIPM----DRLNVNGGAIAVGHPYGVSGARLTGHA 361 (392)
T ss_pred hHHHHHHHHHHHcCCCHHHcCchHhh----h-HHHHHHHHHHHhcCCCc----cccCCCCChHHhCcchhhhHHHHHHHH
Confidence 34789999999999999999998632 1 12222233456777632 1122222 55555555555
Q ss_pred HHHHHHhCCCCCCEEEE
Q 018518 131 CVNWVESASWDGRYGLV 147 (354)
Q Consensus 131 A~~~l~sg~~~~~~vLV 147 (354)
++.+-+.+ +++.|+
T Consensus 362 ~~~l~~~~---~~~g~~ 375 (392)
T PRK07108 362 LIEGKRRG---AKYVVV 375 (392)
T ss_pred HHHHHhhC---CCEEEE
Confidence 55554433 255554
No 169
>PRK08256 lipid-transfer protein; Provisional
Probab=88.86 E-value=1.8 Score=42.77 Aligned_cols=42 Identities=10% Similarity=0.089 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHhhhcCCCCccCcceeeccccchHHHHHHHHHhcchh
Q 018518 222 DSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFND 269 (354)
Q Consensus 222 ~~~~~~~l~~~~~~~~~g~~~~did~~v~Hq~n~~i~~~~~~~l~~~~ 269 (354)
..+.+.+++++ |++++|||.+-+|.++.-..-...+.|||.+
T Consensus 267 ~~a~~~a~~~a------g~~~~DiD~~ei~d~f~~~~l~~le~lg~~~ 308 (391)
T PRK08256 267 RAAAQQVYEQA------GIGPEDIDVVELHDCFSANELLTYEALGLCP 308 (391)
T ss_pred HHHHHHHHHHc------CCCHHHCCEEeeccCCcHHHHHHHHHcCCCC
Confidence 34566666665 6999999999999999888888889999863
No 170
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=88.63 E-value=3.6 Score=37.30 Aligned_cols=77 Identities=12% Similarity=-0.043 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcC--CC----CeeEEeecC-cChhHHHHHH
Q 018518 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYG--NT----DIEGVDSTN-ACYGGTAALF 129 (354)
Q Consensus 57 ~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g--~~----~~~~~di~~-~C~g~~~aL~ 129 (354)
......++.+++|+++|++++|||.++.......... .+...+++.. .. ....-.+++ +|+++...|.
T Consensus 143 ~~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~ 217 (254)
T cd00327 143 SGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGD-----AVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILD 217 (254)
T ss_pred ChHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCcccc-----HHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHH
Confidence 3456778999999999999999999987543322221 2233333310 01 111223444 6666666666
Q ss_pred HHHHHHHhC
Q 018518 130 NCVNWVESA 138 (354)
Q Consensus 130 ~A~~~l~sg 138 (354)
.+...++.+
T Consensus 218 ~~~~~~~~~ 226 (254)
T cd00327 218 ELLLMLEHE 226 (254)
T ss_pred HHHHHHhCC
Confidence 665555543
No 171
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=88.45 E-value=3.1 Score=41.08 Aligned_cols=42 Identities=7% Similarity=0.060 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCc
Q 018518 61 SLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKY 107 (354)
Q Consensus 61 a~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~ 107 (354)
...|++++|+++|++|+|||.+-+.- .+....-...+.||++
T Consensus 282 ~~~a~~~al~~AGi~p~DId~~Ei~d-----aFa~~~l~~~e~lg~~ 323 (385)
T TIGR02445 282 PVPATQKALKRAGLSISDIDVFELNE-----AFAAQALPCLKDLGLL 323 (385)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEEcc-----ccHHHHHHHHHHcCCC
Confidence 46899999999999999999987632 2344555566888874
No 172
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=88.28 E-value=2.5 Score=41.71 Aligned_cols=41 Identities=10% Similarity=0.112 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcC
Q 018518 61 SLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK 106 (354)
Q Consensus 61 a~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl 106 (354)
...|+++||+++|+.|+|||.+-+..+ .+...-...+.||+
T Consensus 288 ~~~a~~~a~~~Agi~~~did~~e~~d~-----fa~~~~~~~e~lG~ 328 (386)
T TIGR01930 288 PVPAIPKALKKAGLSISDIDLFEINEA-----FAAQVLACIKELGL 328 (386)
T ss_pred HHHHHHHHHHHcCCCHHHCCeeehcch-----hHHHHHHHHHHhCC
Confidence 358999999999999999999954322 22333334577776
No 173
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=88.09 E-value=3.1 Score=41.15 Aligned_cols=80 Identities=11% Similarity=0.087 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCC-----CeeEEeecCcChhHHHHHHHHHHHH
Q 018518 61 SLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT-----DIEGVDSTNACYGGTAALFNCVNWV 135 (354)
Q Consensus 61 a~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~-----~~~~~di~~~C~g~~~aL~~A~~~l 135 (354)
...|+++||+++|++|+|||.+-+.- ..+.......+.||++.++ ...++---.||+|...-++.+.++-
T Consensus 294 ~~~a~~~al~~Agl~~~dId~~e~~d-----~f~~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~ 368 (394)
T PRK06445 294 PVPASKKALEKAGLSVKDIDLWEINE-----AFAVVVLYAIKELGLDPETVNIKGGAIAIGHPLGATGARIVGTLARQLQ 368 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecc-----cchHHHHHHHHHhCCCccccCCCCCHHHcCCCccchHHHHHHHHHHHHH
Confidence 46799999999999999999997643 2345556667889984211 1111212226777777777777765
Q ss_pred HhCCCCCCEEEEE
Q 018518 136 ESASWDGRYGLVV 148 (354)
Q Consensus 136 ~sg~~~~~~vLVV 148 (354)
..+ .++.|+.
T Consensus 369 ~~~---~~~gl~~ 378 (394)
T PRK06445 369 IKG---KDYGVAT 378 (394)
T ss_pred hcC---CCEEEEE
Confidence 433 2566553
No 174
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=87.83 E-value=2.4 Score=41.67 Aligned_cols=79 Identities=18% Similarity=0.062 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEe---ecC-cChhHHHHHHHHHHHHH
Q 018518 61 SLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVD---STN-ACYGGTAALFNCVNWVE 136 (354)
Q Consensus 61 a~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~d---i~~-~C~g~~~aL~~A~~~l~ 136 (354)
..++++++|+++|++++|||.+++.... +.+-..++++||+ +++-.... +++ ++++...+|..+ ++
T Consensus 282 ~~~~i~~~L~~~gl~~~dId~~v~Hq~n-----~~~~~~~~~~Lgl--~~ek~~~~l~~~GNt~sAsi~~~L~~~---~~ 351 (379)
T PLN02326 282 VPQVIESALQKAGLTAESIDWLLLHQAN-----QRIIDAVAQRLGI--PPEKVISNLANYGNTSAASIPLALDEA---VR 351 (379)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECCCC-----HHHHHHHHHHcCC--CHHHeeecHhhcCcHHHHHHHHHHHHH---HH
Confidence 4467889999999999999999875432 2333458999999 44322222 333 666666666544 44
Q ss_pred hCCC-CCCEEEEEE
Q 018518 137 SASW-DGRYGLVVC 149 (354)
Q Consensus 137 sg~~-~~~~vLVV~ 149 (354)
.|.. +++++|+++
T Consensus 352 ~g~~~~Gd~vll~~ 365 (379)
T PLN02326 352 SGKVKKGDVIATAG 365 (379)
T ss_pred cCCCCCCCEEEEEE
Confidence 5432 567788776
No 175
>PRK07937 lipid-transfer protein; Provisional
Probab=87.49 E-value=3.7 Score=40.04 Aligned_cols=77 Identities=8% Similarity=-0.091 Sum_probs=42.7
Q ss_pred cccHHHHHHhhCCCcchheeccccEE--EeecCCCCCHHHHHHHHHHHHHHH-cCCCcCCcCEEEEecccCCCCCCCHHH
Q 018518 22 CVLQEALEVHDGVSKGKYTVGLGQDC--MAFCSEVEDVISMSLTVVTSLLEK-YKIDPTQIGRLEVGSETVIDKSKSIKT 98 (354)
Q Consensus 22 ~v~~e~l~~~~~~~~~~~~~gig~r~--~~~~~~~e~~~~La~~Aa~~aL~~-ag~~~~dId~li~~t~t~~~~~P~~a~ 98 (354)
++..++.++.++.++-|+. |++... ..+...+... ..++++++++ +|++|+|||++-+.- .++....
T Consensus 212 vl~s~~~A~~l~~~pv~I~-g~~~~~~~~~~~~~d~~~----~~~~~~a~~~aAgi~~~diD~~Ei~D-----~F~~~~l 281 (352)
T PRK07937 212 VLAAGDRARELRERPAWIT-GIEHRIESPSLGARDLTR----SPSTALAAEAATGGDAGGVDVAELHA-----PFTHQEL 281 (352)
T ss_pred EEecHHHHHHcCCCcEEEE-EEEEeeCCcccccccccc----HHHHHHHHHHhcCCCHHHCCEEEEeC-----CChHHHH
Confidence 4666677666655554443 444321 1111111122 2334445555 599999999997643 2345556
Q ss_pred HHHHHhcCcC
Q 018518 99 FLMQIFEKYG 108 (354)
Q Consensus 99 ~l~~~Lgl~g 108 (354)
...+.||++|
T Consensus 282 ~~~e~lGl~g 291 (352)
T PRK07937 282 ILREALGLGD 291 (352)
T ss_pred HHHHHcCCCC
Confidence 6778899844
No 176
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=87.21 E-value=2.1 Score=42.45 Aligned_cols=43 Identities=7% Similarity=-0.005 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCc
Q 018518 60 MSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKY 107 (354)
Q Consensus 60 La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~ 107 (354)
....|+++|++++|++++|||.+-+.-+ ++.......+.||++
T Consensus 277 ~~~~aa~~a~~~Agi~~~Didv~el~D~-----fa~~~l~~le~lGl~ 319 (403)
T PRK06289 277 HVRQAVLDAYRRAGVGLDDLDGFEVHDC-----FTPSEYLAIDHIGLT 319 (403)
T ss_pred HHHHHHHHHHHHcCCCHHHCeEEeeecc-----chHHHHHHHHHcCCC
Confidence 3568999999999999999999876432 345566677889985
No 177
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=86.81 E-value=1.7 Score=48.26 Aligned_cols=177 Identities=12% Similarity=0.094 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcC-----EEEEecc--cCCC--CCC----------CHHHHHHHHhcCcCCCCeeEEee
Q 018518 57 VISMSLTVVTSLLEKYKIDPTQIG-----RLEVGSE--TVID--KSK----------SIKTFLMQIFEKYGNTDIEGVDS 117 (354)
Q Consensus 57 ~~~La~~Aa~~aL~~ag~~~~dId-----~li~~t~--t~~~--~~P----------~~a~~l~~~Lgl~g~~~~~~~di 117 (354)
..-|-.++.-+|+-++||+|.++. ..+-+|. |... ..| +.-++.++++-..=.-.-+.|.+
T Consensus 87 q~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDfqGPS~s~ 166 (2376)
T KOG1202|consen 87 QLRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDFQGPSFSV 166 (2376)
T ss_pred HHHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEeccCCchhh
Confidence 567899999999999999998765 2332221 1110 011 11233344432100001123445
Q ss_pred cCcChhHHHHHHHHHHHHHhCCCCCCEEEEEEeecc-------c------cCCCCC---------CccccceeEEEEEcc
Q 018518 118 TNACYGGTAALFNCVNWVESASWDGRYGLVVCTDSA-------V------YAEGPA---------RPTGGAAAVAMLIGP 175 (354)
Q Consensus 118 ~~~C~g~~~aL~~A~~~l~sg~~~~~~vLVV~~e~~-------~------~~~~~~---------~~lfGDGAaA~lL~~ 175 (354)
..+|++.++||..|.+-+++|++ ..+||-++... + ..++.+ ...=.||.+|++|.+
T Consensus 167 DtacsSsl~al~~a~~~~r~gqc--d~AiVaG~~liLkPt~slQFlRLgmls~dGsCkaFDeagnGY~Rseg~~avllqr 244 (2376)
T KOG1202|consen 167 DTACSSSLMALQNAFQDIRSGQC--DAAIVAGANLILKPTTSLQFLRLGMLSPDGSCKAFDEAGNGYCRSEGVVAVLLQR 244 (2376)
T ss_pred hhhhHHHHHHHHHHHHhhhccCC--chhhhcccceEeccchhhHHHHhcCcCCCCcccchhccCCceeecCceEEEEEeh
Confidence 66999999999999999999987 88888887654 1 112111 244579999999987
Q ss_pred CCC-c----eeeecceeecccccccccccCCCCccccccCcchHHHHHHHHHHHHHHHHHHHHhhhcCCCCccCcceeec
Q 018518 176 DAP-I----AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVF 250 (354)
Q Consensus 176 ~~~-~----~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~did~~v~ 250 (354)
... . .+. ...+.++.+ ... |..+| .|+. - ...+++.-+.+ |+.++++-|+=-
T Consensus 245 k~~ArRvYAtil--nartNTDGf----KEq-GvTfP--~G~~----Q----~qLi~e~Yse~------Gl~P~sv~YvEA 301 (2376)
T KOG1202|consen 245 KSLARRVYATIL--NARTNTDGF----KEQ-GVTFP--SGDM----Q----EQLIRETYSEA------GLNPESVVYVEA 301 (2376)
T ss_pred hHHHHHHHHHhh--ccccCCCch----hhc-CccCC--CcHH----H----HHHHHHHHHhc------CCCcccEEEEEe
Confidence 642 1 121 122222211 110 11222 2222 1 11223333333 799999999999
Q ss_pred cccchHHH
Q 018518 251 HSPYNKLV 258 (354)
Q Consensus 251 Hq~n~~i~ 258 (354)
|-.+.++-
T Consensus 302 HGtGTkVG 309 (2376)
T KOG1202|consen 302 HGTGTKVG 309 (2376)
T ss_pred ccCCCCCC
Confidence 98766543
No 178
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=86.79 E-value=2 Score=40.62 Aligned_cols=82 Identities=16% Similarity=0.112 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEee---cC-cChhHHHHHHHHHHH
Q 018518 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDS---TN-ACYGGTAALFNCVNW 134 (354)
Q Consensus 59 ~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di---~~-~C~g~~~aL~~A~~~ 134 (354)
+...++.+++|+++|++++|||.+++.... +..-..+.+.||+ ++.-....+ ++ ++++....|..+
T Consensus 223 ~~~~~~i~~~l~~~g~~~~di~~~~~h~~~-----~~~~~~~~~~lgl--~~~~~~~~~~~~Gn~~sas~~~~L~~~--- 292 (320)
T cd00830 223 RLMPESIEEALEKAGLTPDDIDWFVPHQAN-----LRIIEAVAKRLGL--PEEKVVVNLDRYGNTSAASIPLALDEA--- 292 (320)
T ss_pred HhhHHHHHHHHHHcCCCHHHCCEEEECCCC-----HHHHHHHHHHhCC--CHHHhhhhHHhhCcHHHHHHHHHHHHH---
Confidence 455688899999999999999999876432 3344568899999 332221222 23 444444455433
Q ss_pred HHhCCC-CCCEEEEEEe
Q 018518 135 VESASW-DGRYGLVVCT 150 (354)
Q Consensus 135 l~sg~~-~~~~vLVV~~ 150 (354)
++.+.. +++++|+++.
T Consensus 293 ~~~~~~~~G~~vll~~~ 309 (320)
T cd00830 293 IEEGKLKKGDLVLLLGF 309 (320)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 445532 5678888764
No 179
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=86.76 E-value=2.3 Score=40.39 Aligned_cols=81 Identities=17% Similarity=0.026 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEE---eecC-cChhHHHHHHHHHHHH
Q 018518 60 MSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGV---DSTN-ACYGGTAALFNCVNWV 135 (354)
Q Consensus 60 La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~---di~~-~C~g~~~aL~~A~~~l 135 (354)
...++.+++|+++|++++|||.+++... .+..-..+.+.||+ ++.-... +.++ +|+.-+..|. .++
T Consensus 220 ~~~~~i~~~l~~~g~~~~di~~~~~h~~-----~~~~~~~~~~~lg~--~~~~~~~~~~~~Gn~~~a~~~~~L~---~~~ 289 (319)
T PRK09352 220 ELAKVAREALEAAGLTPEDIDWLVPHQA-----NLRIIDATAKKLGL--PMEKVVVTVDKYGNTSAASIPLALD---EAV 289 (319)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEECCC-----CHHHHHHHHHHhCC--CHHHhhhhHHhhCCHHHHHHHHHHH---HHH
Confidence 3456889999999999999999997543 23445678899998 3322111 1223 4455555554 444
Q ss_pred HhCCC-CCCEEEEEEe
Q 018518 136 ESASW-DGRYGLVVCT 150 (354)
Q Consensus 136 ~sg~~-~~~~vLVV~~ 150 (354)
+.|.. +++++|+++.
T Consensus 290 ~~g~~~~Gd~vll~s~ 305 (319)
T PRK09352 290 RDGRIKRGDLVLLEGF 305 (319)
T ss_pred HcCCCCCCCEEEEEEE
Confidence 55432 4678887763
No 180
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=86.72 E-value=1 Score=45.08 Aligned_cols=65 Identities=11% Similarity=0.049 Sum_probs=38.5
Q ss_pred cccHHHHHHhhCCCcc-hheeccccEEEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecc
Q 018518 22 CVLQEALEVHDGVSKG-KYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSE 87 (354)
Q Consensus 22 ~v~~e~l~~~~~~~~~-~~~~gig~r~~~~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~ 87 (354)
++..++.++.++.++- |+..+.......+.. ..+.......|+++|++++|++|+|||.+-+.-+
T Consensus 272 vl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~~-~~~~~~~~~~a~~~a~~~AGl~~~Did~~Ei~d~ 337 (427)
T PRK09268 272 LLASEEWAAEHGLPVLAYLVDAETAAVDFVHG-KEGLLMAPAYAVPRLLARNGLTLQDFDFYEIHEA 337 (427)
T ss_pred EEecHHHHHHcCCCceEEEEEEEEEcCCcccc-cchhhccHHHHHHHHHHHcCCCHHHCCEEEeccc
Confidence 4667777776666554 322222211111111 1122234567999999999999999999987544
No 181
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=86.68 E-value=3.2 Score=39.41 Aligned_cols=81 Identities=21% Similarity=0.158 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCC-ee-EEe-ecC-cChhHHHHHHHHHHH
Q 018518 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTD-IE-GVD-STN-ACYGGTAALFNCVNW 134 (354)
Q Consensus 59 ~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~-~~-~~d-i~~-~C~g~~~aL~~A~~~ 134 (354)
+...++.+++|+++|++++|||.+++... .+..-..+++.||+ +.+ .. .++ +++ +|++-..+|..+
T Consensus 219 ~~~~~~~~~~l~~~g~~~~di~~~~~h~~-----~~~~~~~~~~~lgi--~~~k~~~~~~~~Gn~~sas~~~~L~~~--- 288 (318)
T TIGR00747 219 RKMGDVVEETLEANGLDPEDIDWFVPHQA-----NLRIIEALAKRLEL--DMSQVVKTVHKYGNTSAASIPLALDEL--- 288 (318)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCC-----CHHHHHHHHHHcCC--CHHHeeehHhhhCCHHHHHHHHHHHHH---
Confidence 33567788999999999999999997443 23455678999999 332 11 221 223 555666666443
Q ss_pred HHhCCC-CCCEEEEEE
Q 018518 135 VESASW-DGRYGLVVC 149 (354)
Q Consensus 135 l~sg~~-~~~~vLVV~ 149 (354)
+++|.. +++++|+++
T Consensus 289 ~~~~~~~~Gd~vll~~ 304 (318)
T TIGR00747 289 LRTGRIKPGDLLLLVA 304 (318)
T ss_pred HHcCCCCCCCEEEEEE
Confidence 344421 457888876
No 182
>PRK04262 hypothetical protein; Provisional
Probab=86.66 E-value=1.2 Score=43.05 Aligned_cols=91 Identities=14% Similarity=0.129 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCC-eeE---E-eecC-cChhHHHHHHHHH
Q 018518 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTD-IEG---V-DSTN-ACYGGTAALFNCV 132 (354)
Q Consensus 59 ~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~-~~~---~-di~~-~C~g~~~aL~~A~ 132 (354)
....++.+++|+++|++++|||.+++... .+.+-..++++||+ ++. +.. + ++++ ++++-..+|..+.
T Consensus 209 ~~~~~~i~~~L~~~gl~~~dId~~v~Hq~-----n~~~~~~~~~~Lgl--~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~ 281 (347)
T PRK04262 209 KHIISAAKGLMEKLGLKPSDYDYAVFHQP-----NGKFPLRVAKMLGF--TKEQVKPGLLTPYIGNTYSGSALLGLAAVL 281 (347)
T ss_pred HHHHHHHHHHHHHhCcCHHHhceeecCCC-----chHHHHHHHHHcCC--CHHHhhccchhhhhCChHHHHHHHHHHHHH
Confidence 56778899999999999999999987522 23344567889998 332 221 1 3444 6667677776655
Q ss_pred HHHHhCCCCCCEEEEEEeeccccCCCCCCccccceeEE--EEEc
Q 018518 133 NWVESASWDGRYGLVVCTDSAVYAEGPARPTGGAAAVA--MLIG 174 (354)
Q Consensus 133 ~~l~sg~~~~~~vLVV~~e~~~~~~~~~~~lfGDGAaA--~lL~ 174 (354)
.-+ . +++++|+++ ||.|.++ +++.
T Consensus 282 ~~~--~--~Gd~vll~~--------------~G~G~~~~~~~~~ 307 (347)
T PRK04262 282 DVA--K--PGDRILVVS--------------FGSGAGSDAFSIT 307 (347)
T ss_pred HhC--C--CCCEEEEEe--------------cCCCcceeeEEEE
Confidence 422 2 557888765 7888744 4443
No 183
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=86.18 E-value=1.3 Score=43.92 Aligned_cols=41 Identities=10% Similarity=0.166 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHhhhcCCCCccCcceeeccccchHHHHHHHHHhcch
Q 018518 222 DSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFN 268 (354)
Q Consensus 222 ~~~~~~~l~~~~~~~~~g~~~~did~~v~Hq~n~~i~~~~~~~l~~~ 268 (354)
..+.+..++++ |++++|||+|=+|-+..-..-...+.||+.
T Consensus 298 ~~a~~~al~~a------gl~~~Did~~ei~d~fa~~~l~~~e~lg~~ 338 (397)
T PRK06954 298 VGAIRKLFEKN------GWRAAEVDLFEINEAFAVVTMAAMKEHGLP 338 (397)
T ss_pred HHHHHHHHHHc------CCCHHHCCEEehhhHHHHHHHHHHHHhCCC
Confidence 34556666665 699999999999998876665666788864
No 184
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=85.65 E-value=5.6 Score=39.28 Aligned_cols=79 Identities=9% Similarity=0.111 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCC----CC----eeEEeecCcChhHHHHHHHHH
Q 018518 61 SLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGN----TD----IEGVDSTNACYGGTAALFNCV 132 (354)
Q Consensus 61 a~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~----~~----~~~~di~~~C~g~~~aL~~A~ 132 (354)
...|++++|+++|++|+|||.+-+.- .++...-...+.||++++ -+ ..++---.||+|.......+.
T Consensus 284 ~~~a~~~al~~Agl~~~DId~~El~d-----~F~~~~l~~~e~lg~~~~~~~~vN~~GG~la~GhP~GAtG~~~v~~l~~ 358 (387)
T PRK08947 284 PVPATQKALKRAGLSISDIDVFELNE-----AFAAQSLPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLN 358 (387)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecc-----cchHHHHHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHH
Confidence 46889999999999999999997643 234445556688887431 01 111111226666555555555
Q ss_pred HHHHhCCCCCCEEEE
Q 018518 133 NWVESASWDGRYGLV 147 (354)
Q Consensus 133 ~~l~sg~~~~~~vLV 147 (354)
.+-+.+ .++.|+
T Consensus 359 ~L~~~~---~~~gl~ 370 (387)
T PRK08947 359 LMERKD---AQFGLA 370 (387)
T ss_pred HHHhcC---CCEEEE
Confidence 543322 255555
No 185
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=85.65 E-value=4.9 Score=39.34 Aligned_cols=96 Identities=9% Similarity=-0.014 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcC---CCCeeEE-eecC-cChhHHHHHHHH
Q 018518 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYG---NTDIEGV-DSTN-ACYGGTAALFNC 131 (354)
Q Consensus 57 ~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g---~~~~~~~-di~~-~C~g~~~aL~~A 131 (354)
-......|+++.+++.|++|+|.|.+++.+.. |.+....++.|+..+ .+..... .+++ .|.+...+|...
T Consensus 207 Y~~~~~~a~~~~~~k~gls~~dfdy~vfH~P~-----~k~~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~Las~ 281 (377)
T COG3425 207 YFKHVENAAKGYMEKTGLSPDDFDYIVFHQPN-----GKFPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGLASL 281 (377)
T ss_pred HHHHHHHHHHHHHHHhCCChhhhCeEEecCCC-----CchHHHHHHHhCccHhhcCccchhhhhcCcccchhHHHHHHHH
Confidence 34667899999999999999999999997643 344556666676510 1334334 4666 888877777555
Q ss_pred HHHHHhCCCCCCEEEEEEeeccccCCCCCCccccceeEEEEEc
Q 018518 132 VNWVESASWDGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIG 174 (354)
Q Consensus 132 ~~~l~sg~~~~~~vLVV~~e~~~~~~~~~~~lfGDGAaA~lL~ 174 (354)
-.... . +++++|+++ ||-||++-..+
T Consensus 282 L~~a~--~-~G~rIl~~S--------------YGSGa~s~~fs 307 (377)
T COG3425 282 LDNAK--L-PGDRILLFS--------------YGSGAGSEAFS 307 (377)
T ss_pred HhhcC--C-CCCEEEEEe--------------eCCCcceeEEE
Confidence 44444 2 568999865 89998877664
No 186
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=85.53 E-value=2.1 Score=42.30 Aligned_cols=80 Identities=9% Similarity=-0.059 Sum_probs=47.9
Q ss_pred cccHHHHHHhhCCCcchheeccccEEE--eecCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHH
Q 018518 22 CVLQEALEVHDGVSKGKYTVGLGQDCM--AFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTF 99 (354)
Q Consensus 22 ~v~~e~l~~~~~~~~~~~~~gig~r~~--~~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~ 99 (354)
+++.++.++.++.++-|+ .|++...- ....++. .......|+++|++++|++|+|||.+-+..+ ++.....
T Consensus 218 vl~s~~~A~~l~~~~v~I-~g~~~~~~~~~~~~~~~-~~~~~~~aa~~a~~~AGi~~~did~~elyD~-----Fs~~~~~ 290 (388)
T PRK08142 218 VVVRPEIARSLKRPLVKV-LGAGEAIKGQMGGKVDL-TYSGAAWSGPAAFAEAGVTPADIKYASIYDS-----FTITVLM 290 (388)
T ss_pred EEecHHHHhhcCCCCEEE-EEEEEecCCccccCccc-ccHHHHHHHHHHHHHcCCCHHHCCEEEEecc-----chHHHHH
Confidence 466667666655433344 34443211 1111222 2334568999999999999999998876543 2344455
Q ss_pred HHHHhcCcC
Q 018518 100 LMQIFEKYG 108 (354)
Q Consensus 100 l~~~Lgl~g 108 (354)
..+.||+++
T Consensus 291 ~~E~lGl~~ 299 (388)
T PRK08142 291 QLEDLGFCK 299 (388)
T ss_pred HHHHcCCCC
Confidence 567888853
No 187
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=85.51 E-value=2.2 Score=42.23 Aligned_cols=80 Identities=13% Similarity=0.095 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcC---CCCeeEEeecC--cChhHHHHHHHHHHH
Q 018518 60 MSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYG---NTDIEGVDSTN--ACYGGTAALFNCVNW 134 (354)
Q Consensus 60 La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g---~~~~~~~di~~--~C~g~~~aL~~A~~~ 134 (354)
....|+++||+++|++|+|||++-+. + ........-.+.||+.- +.+--..-+++ |++|....+..+.++
T Consensus 291 ~~~~a~~~Al~~AGl~p~DID~~ei~----d-afa~~~l~~~~~l~~~~~~vN~sGg~~a~GHplgAtG~~~~~~~~~qL 365 (392)
T PRK06633 291 APVPASQKALSKAGWSVNDLEVIEVN----E-AFAAQSIYVNREMKWDMEKVNINGGAIAIGHPIGASGGRVLITLIHGL 365 (392)
T ss_pred HHHHHHHHHHHHcCCCHHHcCeeehh----h-HHHHHHHHHHhhhCCCccccCCCCchHhhCCcHHHHHHHHHHHHHHHH
Confidence 34789999999999999999998743 1 11111111234455410 01111111222 677777777777777
Q ss_pred HHhCCCCCCEEEE
Q 018518 135 VESASWDGRYGLV 147 (354)
Q Consensus 135 l~sg~~~~~~vLV 147 (354)
-+.| +++.|+
T Consensus 366 ~~~~---~~~g~~ 375 (392)
T PRK06633 366 RRAK---AKKGLV 375 (392)
T ss_pred HhcC---CCeEEE
Confidence 6544 255554
No 188
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=84.81 E-value=2.9 Score=41.13 Aligned_cols=80 Identities=9% Similarity=-0.080 Sum_probs=47.7
Q ss_pred cccHHHHHHhhCCC-cchheeccccEEEe--ec-CCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHH
Q 018518 22 CVLQEALEVHDGVS-KGKYTVGLGQDCMA--FC-SEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIK 97 (354)
Q Consensus 22 ~v~~e~l~~~~~~~-~~~~~~gig~r~~~--~~-~~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a 97 (354)
+|..++.++.++.+ +-|+ .|++...-. +. .++.....-...|+++||+++|++|+|||.+-+..+ .+...
T Consensus 217 vl~s~e~A~~l~~~~~~~I-~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~DiD~~ei~d~-----ft~~~ 290 (385)
T PRK12578 217 IFASEEKVKELKIDSPVWI-TGIGYANDYAYVARRGEWVGFKATQLAARQAYNMAKVTPNDIEVATVHDA-----FTIAE 290 (385)
T ss_pred EEecHHHHHhcCCCCCeEE-EEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCc-----ChHHH
Confidence 45666766666643 3344 355543211 11 111111123468999999999999999999866433 23455
Q ss_pred HHHHHHhcCc
Q 018518 98 TFLMQIFEKY 107 (354)
Q Consensus 98 ~~l~~~Lgl~ 107 (354)
....+.||++
T Consensus 291 l~~le~lGl~ 300 (385)
T PRK12578 291 IMGYEDLGFT 300 (385)
T ss_pred HHHHHHcCCC
Confidence 5667788884
No 189
>PRK06059 lipid-transfer protein; Provisional
Probab=84.29 E-value=7.6 Score=38.40 Aligned_cols=42 Identities=12% Similarity=0.086 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCc
Q 018518 61 SLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKY 107 (354)
Q Consensus 61 a~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~ 107 (354)
...|++++++++|++++|||++-+..+ .........+.||++
T Consensus 275 ~~~a~~~a~~~agl~~~Did~~El~d~-----f~~~~l~~~e~lGl~ 316 (399)
T PRK06059 275 KDQILDAAYAEAGIGPEDLSLAEVYDL-----STALELDWYEHLGLC 316 (399)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEeeccc-----ChHHHHHHHHHcCCC
Confidence 357899999999999999999976543 123334445888884
No 190
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=83.92 E-value=2 Score=42.02 Aligned_cols=83 Identities=12% Similarity=0.228 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHH-hcCcCCCC--eeEEe-ecC-cChhHHHHHHHHHH
Q 018518 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQI-FEKYGNTD--IEGVD-STN-ACYGGTAALFNCVN 133 (354)
Q Consensus 59 ~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~-Lgl~g~~~--~~~~d-i~~-~C~g~~~aL~~A~~ 133 (354)
+...++.+++|+++|++++|||.+++.-... .+-..+.++ ||+..+.. ...++ .++ +|++...+|..+..
T Consensus 271 ~~~~~~i~~~L~~~gl~~~dId~~~~Hq~~~-----~~~d~~~~~llg~~~~~~~~~~~~~~~GNt~sasi~~~L~~~~~ 345 (372)
T PRK07515 271 PMVAEHIVEHLAENGLTPADVKRFWLHQANI-----NMNQLIGKKVLGRDATPEEAPVILDEYANTSSAGSIIAFHKHSD 345 (372)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCCCH-----HHHHHHHHHhccCCCChhhceEeHHhcCCchhhHHHHHHHHHhc
Confidence 4467899999999999999999998753322 122234555 56511111 11222 344 78888888877644
Q ss_pred HHHhCCCCCCEEEEEEe
Q 018518 134 WVESASWDGRYGLVVCT 150 (354)
Q Consensus 134 ~l~sg~~~~~~vLVV~~ 150 (354)
.++ +++++|+++.
T Consensus 346 ~~~----~Gd~vll~~~ 358 (372)
T PRK07515 346 DLA----AGDLGVICSF 358 (372)
T ss_pred cCC----CCCEEEEEEe
Confidence 332 4578887763
No 191
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=83.92 E-value=3.6 Score=40.74 Aligned_cols=45 Identities=16% Similarity=0.119 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCc
Q 018518 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKY 107 (354)
Q Consensus 58 ~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~ 107 (354)
......|++++++++|++|+|||++-+.-+ ++...-...+.||++
T Consensus 287 ~~~~~~a~~~a~~~agl~~~Did~~Ei~d~-----Fa~~~l~~~e~lG~~ 331 (390)
T PRK06504 287 LEAPLPATERALKKAGMKIDDIDLYEVNEA-----FASVPLAWLKATGAD 331 (390)
T ss_pred hccHHHHHHHHHHHcCCCHHHCCEEEeccc-----chHHHHHHHHHhCCC
Confidence 345567999999999999999999976433 344455667889984
No 192
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=83.71 E-value=4.3 Score=40.19 Aligned_cols=42 Identities=7% Similarity=0.105 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCc
Q 018518 61 SLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKY 107 (354)
Q Consensus 61 a~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~ 107 (354)
...+++++|+++|++|+|||.+-+.- .+........+.||++
T Consensus 293 ~~~a~~~al~~Agi~~~Did~~Ei~d-----~f~~~~l~~~e~lg~~ 334 (394)
T PLN02644 293 PALAIPKALKHAGLEASQVDYYEINE-----AFSVVALANQKLLGLD 334 (394)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeCc-----HHHHHHHHHHHHhCCC
Confidence 34699999999999999999998622 2334455566788873
No 193
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=82.70 E-value=4.5 Score=40.67 Aligned_cols=80 Identities=11% Similarity=-0.015 Sum_probs=49.2
Q ss_pred cccHHHHHHhhCCCc-----chheeccccEEEe--ecCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCC
Q 018518 22 CVLQEALEVHDGVSK-----GKYTVGLGQDCMA--FCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSK 94 (354)
Q Consensus 22 ~v~~e~l~~~~~~~~-----~~~~~gig~r~~~--~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P 94 (354)
++..++.++.++.++ -|+ .+.+..... ..+.+-+....+..|+++|++++|++++|||++-+.-+ ++
T Consensus 266 vl~See~A~~l~~~p~~~~~v~i-~g~~~~~~~~~~~~~~~~~~~~~~~A~~~a~~~AGl~~~DiD~~Ei~da-----Fa 339 (438)
T PTZ00455 266 VLASEEGLQKMGLSPNDSRLVEI-KSLACASGNLYEDPPDATRMFTSRAAAQKALSMAGVKPSDLQVAEVHDC-----FT 339 (438)
T ss_pred EEecHHHHHhcCCCCCCCccEEE-EEEEEecCCcccCccccccchHHHHHHHHHHHHcCCCHHHCcEeeeccc-----Ch
Confidence 466677777776654 233 333332110 11111122344578999999999999999999976543 34
Q ss_pred CHHHHHHHHhcCc
Q 018518 95 SIKTFLMQIFEKY 107 (354)
Q Consensus 95 ~~a~~l~~~Lgl~ 107 (354)
...-...+.||++
T Consensus 340 ~~~l~~~e~lGl~ 352 (438)
T PTZ00455 340 IAELLMYEALGIA 352 (438)
T ss_pred HHHHHHHHHcCCC
Confidence 4556667888884
No 194
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=82.54 E-value=4.7 Score=39.83 Aligned_cols=80 Identities=8% Similarity=-0.022 Sum_probs=47.1
Q ss_pred cccHHHHHHhhCCCcchheeccccEE--EeecCCCCCHHHHHHHHHHHHHHHcCCC--cCCcCEEEEecccCCCCCCCHH
Q 018518 22 CVLQEALEVHDGVSKGKYTVGLGQDC--MAFCSEVEDVISMSLTVVTSLLEKYKID--PTQIGRLEVGSETVIDKSKSIK 97 (354)
Q Consensus 22 ~v~~e~l~~~~~~~~~~~~~gig~r~--~~~~~~~e~~~~La~~Aa~~aL~~ag~~--~~dId~li~~t~t~~~~~P~~a 97 (354)
+++.++.++.++.++-|+ .|++... ......+-....-...|+++|++++|++ ++|||.+-+.- .+....
T Consensus 218 vl~s~~~a~~l~~~pv~I-~g~g~~~~~~~~~~~~~~~~~~~~~Aa~~a~~~AGi~~p~~DiD~~ei~D-----~Ft~~~ 291 (385)
T PRK06066 218 VLASEEVAKKLTDDPVWI-KGIGWSTESSNLETAELGKANYMRIAADMAYKMAGIESPRKEVDAAEVDD-----RYSYKE 291 (385)
T ss_pred EEeCHHHHHhcCCCCEEE-EEEEEecCCcccccccccccHHHHHHHHHHHHHcCCCCCHHHCcEEEEec-----CChHHH
Confidence 456666666655444444 3444322 1111111111222347999999999997 69999997642 234455
Q ss_pred HHHHHHhcCc
Q 018518 98 TFLMQIFEKY 107 (354)
Q Consensus 98 ~~l~~~Lgl~ 107 (354)
....+.||++
T Consensus 292 l~~~e~lG~~ 301 (385)
T PRK06066 292 LQHIEALRLS 301 (385)
T ss_pred HHHHHHcCCC
Confidence 6667788884
No 195
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=81.96 E-value=2.2 Score=41.13 Aligned_cols=83 Identities=13% Similarity=0.077 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeec--C--cChhHHHHHHHHH
Q 018518 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST--N--ACYGGTAALFNCV 132 (354)
Q Consensus 57 ~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~--~--~C~g~~~aL~~A~ 132 (354)
+..+..++++++|++++++++|||.++..- .-..+-..+.++||+ +.+-....+. + +-++-..+|..
T Consensus 221 av~~~~~~~~~~L~~~~l~~~dId~~vpHQ-----an~ri~~~i~~~l~~--~~~k~~~~~~~yGNtsaAsiplaL~~-- 291 (323)
T COG0332 221 AVRAMPKAIEEVLEKAGLTPEDIDWFVPHQ-----ANLRIIEAIAKKLGI--PEEKVVVTVDKYGNTSAASIPLALDE-- 291 (323)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEcccc-----ccHHHHHHHHHHcCC--CHHHHhhHHHHhcccccchHHHHHHH--
Confidence 567888999999999999999999998642 223445678899998 4443334332 2 33333344443
Q ss_pred HHHHhCCC-CCCEEEEEE
Q 018518 133 NWVESASW-DGRYGLVVC 149 (354)
Q Consensus 133 ~~l~sg~~-~~~~vLVV~ 149 (354)
+++.|+. ++..+|+++
T Consensus 292 -~~~~g~ik~Gd~ill~~ 308 (323)
T COG0332 292 -ALREGRIKPGDLVLLEA 308 (323)
T ss_pred -HhhhCCCCCCCEEEEEe
Confidence 3445543 334555543
No 196
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=81.81 E-value=7.3 Score=38.36 Aligned_cols=43 Identities=12% Similarity=0.057 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCc
Q 018518 60 MSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKY 107 (354)
Q Consensus 60 La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~ 107 (354)
-...|++++|+++|++++|||.+-+.-+. +.......+.||++
T Consensus 259 ~~~~a~~~al~~aGi~~~did~~e~~d~f-----t~~~~~~~e~lgl~ 301 (389)
T PRK06064 259 AAVVAAEKAYKMAGIEPKDIDVAEVHDCF-----TIAEILAYEDLGFA 301 (389)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEecCCC-----cHHHHHHHHHcCCC
Confidence 34579999999999999999999764432 22445567788874
No 197
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=81.53 E-value=1.4 Score=35.69 Aligned_cols=80 Identities=14% Similarity=0.184 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEE-ecccCCCCCCCHHHHHHHHhcCcC-CCCeeEEee----cC-cChhHHHHHHHH
Q 018518 59 SMSLTVVTSLLEKYKIDPTQIGRLEV-GSETVIDKSKSIKTFLMQIFEKYG-NTDIEGVDS----TN-ACYGGTAALFNC 131 (354)
Q Consensus 59 ~La~~Aa~~aL~~ag~~~~dId~li~-~t~t~~~~~P~~a~~l~~~Lgl~g-~~~~~~~di----~~-~C~g~~~aL~~A 131 (354)
+--.++.+++|+++|++|+|||+|.. ++.|+. .-+.=...+.+.++-.. ...++.--+ ++ ..++++..|..+
T Consensus 25 ~~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~-~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~Gh~~~asG~~~l~~~ 103 (119)
T PF02801_consen 25 AALARAIRRALADAGISPEDIDYIEAHGTGTPL-GDAAEAEAIARVFGDSARQQPVPVGSVKSNIGHTEAASGLLSLAKA 103 (119)
T ss_dssp HHHHHHHHHHHHHHTS-GGGEEEEE----SSHH-HHHHHHHHHHHHHGGGGGTSTSEEE-THHHH-B-GGGHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhccccccceeeeeecccccc-chhhhhhhhhhhhcccccccccceeccccccccccccchHHHHHHH
Confidence 34478899999999999999999985 333332 12333445666666411 012444433 22 667777777777
Q ss_pred HHHHHhCC
Q 018518 132 VNWVESAS 139 (354)
Q Consensus 132 ~~~l~sg~ 139 (354)
...++.+.
T Consensus 104 ~l~l~~~~ 111 (119)
T PF02801_consen 104 LLALEHGT 111 (119)
T ss_dssp HHHHHHTE
T ss_pred HHHHhcCC
Confidence 77777663
No 198
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=81.06 E-value=3 Score=41.08 Aligned_cols=39 Identities=15% Similarity=0.185 Sum_probs=32.2
Q ss_pred HHHHHHHHHHhhhcCCCCccCcceeeccccchHHHHHHHHHhcch
Q 018518 224 CYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFN 268 (354)
Q Consensus 224 ~~~~~l~~~~~~~~~g~~~~did~~v~Hq~n~~i~~~~~~~l~~~ 268 (354)
..+..++++ |++++|||++=+|-+..-+.-...+.|||.
T Consensus 285 a~~~a~~~a------gi~~~did~~e~~d~Fa~~~~~~~e~lG~~ 323 (382)
T PRK07801 285 ATRYALEKT------GLSIDDIDVVEINEAFAPVVLAWLKETGAD 323 (382)
T ss_pred HHHHHHHHc------CCCHHHcCEeeecccchHHHHHHHHHhCCC
Confidence 455666665 699999999999999988888888999874
No 199
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=81.00 E-value=6.7 Score=38.68 Aligned_cols=80 Identities=10% Similarity=-0.017 Sum_probs=48.4
Q ss_pred cccHHHHHHhhCCCcc-hheeccccEE--EeecCCCCCHHHHHHHHHHHHHHHcCCC--cCCcCEEEEecccCCCCCCCH
Q 018518 22 CVLQEALEVHDGVSKG-KYTVGLGQDC--MAFCSEVEDVISMSLTVVTSLLEKYKID--PTQIGRLEVGSETVIDKSKSI 96 (354)
Q Consensus 22 ~v~~e~l~~~~~~~~~-~~~~gig~r~--~~~~~~~e~~~~La~~Aa~~aL~~ag~~--~~dId~li~~t~t~~~~~P~~ 96 (354)
+++.+|.++.++.++. |+ .|.+... ..+...+.........|+++|++++|++ ++|||++-+..+ ++..
T Consensus 216 vl~s~e~a~~l~~~~~~~I-~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~p~~Did~~el~d~-----F~~~ 289 (386)
T PRK08313 216 VIGDEEAADAAAGRPVAWI-HGTAMRTEPLAFAGRDQVNPQAGRDAAAALWKAAGITDPRDEIDVAEIYVP-----FSWF 289 (386)
T ss_pred EEecHHHHHhcCCCCCeEE-EEEEEEecCcccccccccccHHHHHHHHHHHHHcCCCCChhhCCEEEeccC-----ChHH
Confidence 4667777766554443 55 4554332 1111111122345568999999999997 699998876543 3444
Q ss_pred HHHHHHHhcCc
Q 018518 97 KTFLMQIFEKY 107 (354)
Q Consensus 97 a~~l~~~Lgl~ 107 (354)
.....+.||++
T Consensus 290 ~~~~~e~lGl~ 300 (386)
T PRK08313 290 EPMWLENLGFA 300 (386)
T ss_pred HHHHHHHcCCC
Confidence 55566788874
No 200
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=80.99 E-value=9.8 Score=37.68 Aligned_cols=80 Identities=9% Similarity=-0.090 Sum_probs=46.7
Q ss_pred cccHHHHHHhhCCCcchheeccccE--EEeecCCCCCHHHHHHHHHHHHHHHcCCCc--CCcCEEEEecccCCCCCCCHH
Q 018518 22 CVLQEALEVHDGVSKGKYTVGLGQD--CMAFCSEVEDVISMSLTVVTSLLEKYKIDP--TQIGRLEVGSETVIDKSKSIK 97 (354)
Q Consensus 22 ~v~~e~l~~~~~~~~~~~~~gig~r--~~~~~~~~e~~~~La~~Aa~~aL~~ag~~~--~dId~li~~t~t~~~~~P~~a 97 (354)
+++.+|.++.++.++-|+ .|++.. +..+...+.........|++++++++|+++ +|||.+-+.-+ ++...
T Consensus 224 vl~s~e~A~~l~~~~v~I-~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~aGi~~p~~diD~~ei~D~-----Fs~~~ 297 (392)
T PRK06065 224 VLASEDLARRYTDTPVWV-EGVGWTLDNTEWPNRDLAYPRYVEFAARMAYKMAGIERPRKEIDVAEPYDP-----FDYKE 297 (392)
T ss_pred EEeCHHHHHhcCCCCEEE-EEEEEecCccccccccccccHHHHHHHHHHHHHcCCCCchhhCcEEEecCC-----ChHHH
Confidence 466777777666555554 344432 111111111122223579999999999985 99999976443 23344
Q ss_pred HHHHHHhcCc
Q 018518 98 TFLMQIFEKY 107 (354)
Q Consensus 98 ~~l~~~Lgl~ 107 (354)
....+.||++
T Consensus 298 l~~~E~lG~~ 307 (392)
T PRK06065 298 LHHLEGLQLA 307 (392)
T ss_pred HHHHHHcCCC
Confidence 4555677764
No 201
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=80.77 E-value=9.1 Score=38.34 Aligned_cols=29 Identities=7% Similarity=0.037 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEecc
Q 018518 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSE 87 (354)
Q Consensus 59 ~La~~Aa~~aL~~ag~~~~dId~li~~t~ 87 (354)
.-...|+++||+++|++++|||.+-+.-+
T Consensus 309 ~~~~~a~~~al~~AGl~~~DiD~~Ei~d~ 337 (428)
T PRK08963 309 LGPAYATPLALERAGLTLADLTLIDMHEA 337 (428)
T ss_pred hHHHHHHHHHHHHcCCCHHHCCEEEEccc
Confidence 34567999999999999999999987544
No 202
>PRK06158 thiolase; Provisional
Probab=80.72 E-value=4.7 Score=39.72 Aligned_cols=45 Identities=7% Similarity=0.038 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcC
Q 018518 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYG 108 (354)
Q Consensus 59 ~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g 108 (354)
.-...|+++|++++|++|+|||.+-+..+ ++.......+.||+++
T Consensus 254 ~~~~~aa~~A~~~AGi~p~DId~~ElyD~-----Fs~~~l~~~E~lG~~~ 298 (384)
T PRK06158 254 TAAAESGPRAFAMAGLTPADIDVVELYDA-----FTINTILFLEDLGFCA 298 (384)
T ss_pred hHHHHHHHHHHHHcCCCHHHCcEEEecCC-----chHHHHHHHHHcCCCC
Confidence 33568999999999999999999977543 3344455567888853
No 203
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=80.57 E-value=6.2 Score=38.88 Aligned_cols=44 Identities=5% Similarity=-0.102 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCc
Q 018518 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKY 107 (354)
Q Consensus 59 ~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~ 107 (354)
.-...|++++++++|++|+|||++-+.-+ .+.......+.||++
T Consensus 260 ~~~~~a~~~a~~~agl~~~did~~e~~d~-----f~~~~~~~~e~lg~~ 303 (389)
T PRK07516 260 EGPRRAWQRALAQAGVTLDDLSFVETHDC-----FTIAELIEYEAMGLA 303 (389)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecC-----CCHHHHHHHHHcCCC
Confidence 44468999999999999999999976432 344455667888874
No 204
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=80.19 E-value=3.8 Score=40.27 Aligned_cols=97 Identities=12% Similarity=0.023 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCC-----------eeEEeecC-cChhHHH
Q 018518 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTD-----------IEGVDSTN-ACYGGTA 126 (354)
Q Consensus 59 ~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~-----------~~~~di~~-~C~g~~~ 126 (354)
+...++.+++|++.|+.++|||.+++....+-...++.. .+.+.++. +.. ...=.+++ +|++...
T Consensus 205 ~~~~~~~~~~l~~~g~~~~did~~i~H~p~~~~~~k~~~-~~l~~~~~--~~~~~~~~~~~~s~~~~~~~GN~~sas~~l 281 (379)
T TIGR01835 205 NAFENAWNDYAKRTGLSLADFAAFCFHVPFTKMGLKALR-HILKKNYE--DEDESVQNAYLESIIYNREVGNLYTGSLYL 281 (379)
T ss_pred HHHHHHHHHHHHHhCCCHHHcCEEEECCCCCcHHHHHHH-HHHhhccc--ccHHHHHHHhhhhhhhhhhcCchHhHHHHH
Confidence 455688899999999999999999986532222122222 23345554 110 01113444 5566666
Q ss_pred HHHHHHHHHHhC-C-CCCCEEEEEEeeccccCCCCCCccccceeEEEEEcc
Q 018518 127 ALFNCVNWVESA-S-WDGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIGP 175 (354)
Q Consensus 127 aL~~A~~~l~sg-~-~~~~~vLVV~~e~~~~~~~~~~~lfGDGAaA~lL~~ 175 (354)
+|..+ ++.+ . -+++++++++ ||-|++|-..+-
T Consensus 282 ~L~~~---l~~~~~~~~Gd~ill~s--------------~GsG~~ae~~~~ 315 (379)
T TIGR01835 282 GLASL---LENAFEDTTGDKIGLFS--------------YGSGAVAEFFSG 315 (379)
T ss_pred HHHHH---HHhcccCCCCCEEEEEE--------------ecCCcceeeEEE
Confidence 66544 3332 1 1568888765 888988877654
No 205
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=79.24 E-value=7.2 Score=37.97 Aligned_cols=44 Identities=9% Similarity=-0.010 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCc
Q 018518 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKY 107 (354)
Q Consensus 59 ~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~ 107 (354)
.-...|++++|+++|++++|||++-+..+ ++.......+.||++
T Consensus 251 ~~~~~a~~~al~~Agl~~~did~~ei~d~-----F~~~~l~~~e~lGl~ 294 (375)
T cd00829 251 DAARLAARRAYKMAGITPDDIDVAELYDC-----FTIAELLALEDLGFC 294 (375)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEecCc-----ChHHHHHHHHHcCCC
Confidence 44568999999999999999999977544 344556667888884
No 206
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=78.30 E-value=8.9 Score=37.99 Aligned_cols=80 Identities=10% Similarity=-0.079 Sum_probs=46.9
Q ss_pred cccHHHHHHhhCC-CcchheeccccEEE---eecCCCCCHHH--HHHHHHHHHHHHcCCC--cCCcCEEEEecccCCCCC
Q 018518 22 CVLQEALEVHDGV-SKGKYTVGLGQDCM---AFCSEVEDVIS--MSLTVVTSLLEKYKID--PTQIGRLEVGSETVIDKS 93 (354)
Q Consensus 22 ~v~~e~l~~~~~~-~~~~~~~gig~r~~---~~~~~~e~~~~--La~~Aa~~aL~~ag~~--~~dId~li~~t~t~~~~~ 93 (354)
++..++.++.++. ++-|+. |++...- ....+..+... ....|+++|++++|++ ++|||.+-+.- .+
T Consensus 224 vl~s~~~A~~l~~~~~v~I~-g~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGl~~~~~Did~~Ei~D-----~F 297 (398)
T PRK06157 224 IVTTPEIARALGKKDPVYVK-ALQLAVSNGWELQYNGWDGSYFPTTRIAARKAYREAGITDPREELSMAEVHD-----CF 297 (398)
T ss_pred EEecHHHHHhhCCCCCeEEE-EEEEecccccccccccccccccHHHHHHHHHHHHHcCCCCchhcCCEEEEec-----CC
Confidence 4666777776665 444443 3333210 00001112222 2567999999999997 79999986542 23
Q ss_pred CCHHHHHHHHhcCc
Q 018518 94 KSIKTFLMQIFEKY 107 (354)
Q Consensus 94 P~~a~~l~~~Lgl~ 107 (354)
....-...+.||++
T Consensus 298 s~~~l~~~e~lGl~ 311 (398)
T PRK06157 298 SITELVTMEDLGLS 311 (398)
T ss_pred hHHHHHHHHHcCCC
Confidence 44556667888884
No 207
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=77.32 E-value=4.7 Score=39.86 Aligned_cols=42 Identities=10% Similarity=0.033 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCc
Q 018518 61 SLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKY 107 (354)
Q Consensus 61 a~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~ 107 (354)
...|+++||+++|++++|||++-+.-+ ++.......+.||++
T Consensus 271 ~~~A~~~al~~Agi~~~DID~~Ei~d~-----Fa~~~l~~~e~lgl~ 312 (393)
T cd00826 271 PIEAARKALEKAGLGIGDLDLIEAHDA-----FAANACATNEALGLC 312 (393)
T ss_pred HHHHHHHHHHHcCCCHHHcCeeehhhh-----hHHHHHHHHHHhCCC
Confidence 579999999999999999999876432 344556667888874
No 208
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=75.07 E-value=12 Score=37.54 Aligned_cols=43 Identities=9% Similarity=-0.014 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHcCCC--cCCcCEEEEecccCCCCCCCHHHHHHHHhcCc
Q 018518 60 MSLTVVTSLLEKYKID--PTQIGRLEVGSETVIDKSKSIKTFLMQIFEKY 107 (354)
Q Consensus 60 La~~Aa~~aL~~ag~~--~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~ 107 (354)
....|+++|++++|++ ++|||.+-+.-+ ++...-...+.||++
T Consensus 294 ~~~~a~~~a~~~AGl~~~~~DiD~~Ei~D~-----Fa~~~l~~lE~lGl~ 338 (430)
T PRK06365 294 AGRMAAKEAYEMAGITDPLNDLDLIELHDA-----YTSSEIQTYEDLGLC 338 (430)
T ss_pred HHHHHHHHHHHHcCCCCCHHHCCEEEeecC-----CcHHHHHHHHHcCCC
Confidence 4458999999999997 799999977543 334455667888885
No 209
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=74.34 E-value=10 Score=38.07 Aligned_cols=25 Identities=4% Similarity=0.082 Sum_probs=22.2
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEEec
Q 018518 62 LTVVTSLLEKYKIDPTQIGRLEVGS 86 (354)
Q Consensus 62 ~~Aa~~aL~~ag~~~~dId~li~~t 86 (354)
..|+++||+++|++++|||++-+.-
T Consensus 314 ~~a~~~al~~Agl~~~Did~~Ei~d 338 (430)
T TIGR02446 314 SYATPLALQRAGLALSDLTLIDMHE 338 (430)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecc
Confidence 5799999999999999999997644
No 210
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=74.31 E-value=3.3 Score=39.54 Aligned_cols=39 Identities=18% Similarity=0.288 Sum_probs=31.8
Q ss_pred HHHHHHHHHHhhhcCCCCccCcceeeccccchHHHHHHHHHhcch
Q 018518 224 CYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFN 268 (354)
Q Consensus 224 ~~~~~l~~~~~~~~~g~~~~did~~v~Hq~n~~i~~~~~~~l~~~ 268 (354)
++..+++++ ||..+|||+|=+.-+..-..-...|+|+++
T Consensus 299 aipk~lk~a------G~~~sdVd~~EiNEAFs~v~lA~iK~Lgld 337 (396)
T KOG1390|consen 299 AIPKALKKA------GLEQSDVDYWEINEAFSVVVLANIKKLGLD 337 (396)
T ss_pred HHHHHHHHc------CcchhhhhHHhhhhhhhHHHHHHHHHhCCC
Confidence 445555554 799999999999999988888888999874
No 211
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=73.71 E-value=7.3 Score=37.83 Aligned_cols=81 Identities=12% Similarity=0.073 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHc--CCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCC-ee----EE-eecC-cChhHHHHHH
Q 018518 59 SMSLTVVTSLLEKY--KIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTD-IE----GV-DSTN-ACYGGTAALF 129 (354)
Q Consensus 59 ~La~~Aa~~aL~~a--g~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~-~~----~~-di~~-~C~g~~~aL~ 129 (354)
....++++++|+++ |++++|||.+++..... .+-..+.+.||+ ++. +. .+ +.++ ++++...+|.
T Consensus 259 ~~~~~~i~~~L~~~~~g~~~~did~~~~H~~~~-----~i~~~v~~~lgl--~~~~~~~s~~~l~~~GN~~sasi~~~L~ 331 (361)
T cd00831 259 KNLERVLRKLLARLGIGLFKLAFDHWCVHPGGR-----AVLDAVEKALGL--SPEDLEASRMVLRRYGNMSSSSVLYVLA 331 (361)
T ss_pred HHHHHHHHHHhccccCCCccccceEEEECCCCh-----HHHHHHHHHcCC--CHHHHHHHHHHHHHhCCchhccHHHHHH
Confidence 35566788999999 99999999999865432 334568899998 332 21 12 3444 6666777776
Q ss_pred HHHHHHHhCCC-CCCEEEEEE
Q 018518 130 NCVNWVESASW-DGRYGLVVC 149 (354)
Q Consensus 130 ~A~~~l~sg~~-~~~~vLVV~ 149 (354)
.+. +.|.. +++++|+++
T Consensus 332 ~~~---~~g~~~~Gd~vll~~ 349 (361)
T cd00831 332 YME---AKGRVKRGDRGLLIA 349 (361)
T ss_pred HHH---HhCCCCCCCEEEEEE
Confidence 554 44432 457888776
No 212
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=72.99 E-value=20 Score=35.78 Aligned_cols=46 Identities=11% Similarity=0.099 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEE-EecccCCCCCCCHHHHHHHHhcC
Q 018518 60 MSLTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSKSIKTFLMQIFEK 106 (354)
Q Consensus 60 La~~Aa~~aL~~ag~~~~dId~li-~~t~t~~~~~P~~a~~l~~~Lgl 106 (354)
-..++.++||+++|++|+|||.|- .+|.|+. .-+.=...|++.+|.
T Consensus 287 ~~~~a~~~Al~~agi~~~did~ie~hgtgt~~-~D~~E~~Al~~~fg~ 333 (418)
T PRK07910 287 RAGHAMTRAIELAGLTPGDIDHVNAHATGTSV-GDVAEGKAINNALGG 333 (418)
T ss_pred HHHHHHHHHHHHhCCCHHHCCEEEcCCcCCCC-CCHHHHHHHHHHhCC
Confidence 467899999999999999999997 4555543 224445566777774
No 213
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=72.78 E-value=11 Score=36.59 Aligned_cols=48 Identities=15% Similarity=0.187 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEE-ecccCCCCCCCHHHHHHHHhcC
Q 018518 58 ISMSLTVVTSLLEKYKIDPTQIGRLEV-GSETVIDKSKSIKTFLMQIFEK 106 (354)
Q Consensus 58 ~~La~~Aa~~aL~~ag~~~~dId~li~-~t~t~~~~~P~~a~~l~~~Lgl 106 (354)
..-..+|.++||+++|++|+|||.|-. +|.|+. .-+.=...|.+.+|-
T Consensus 205 ~~~~~~ai~~AL~~Agl~p~dIdyIeaHgtgT~~-~D~~E~~Ai~~~fg~ 253 (342)
T PRK14691 205 GDGAYRAMKIALRQAGITPEQVQHLNAHATSTPV-GDLGEINAIKHLFGE 253 (342)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEecCCCCcC-CCHHHHHHHHHHhCC
Confidence 355678999999999999999999874 555543 234445566677764
No 214
>PRK07855 lipid-transfer protein; Provisional
Probab=72.20 E-value=6.6 Score=38.75 Aligned_cols=43 Identities=12% Similarity=0.083 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcC
Q 018518 61 SLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYG 108 (354)
Q Consensus 61 a~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g 108 (354)
...|+++|++++|++++|||.+-+.-+ ++.......+.||+++
T Consensus 268 ~~~aa~~a~~~AGi~~~DiDv~El~D~-----Ft~~~l~~~E~lG~~~ 310 (386)
T PRK07855 268 MGLVARQLWAQSGLGPADIDTAILYDH-----FTPFVLMQLEELGFCG 310 (386)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEeccC-----CcHHHHHHHHHcCCCC
Confidence 457999999999999999999866433 3445556677888854
No 215
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=67.86 E-value=5.7 Score=38.58 Aligned_cols=61 Identities=13% Similarity=0.201 Sum_probs=39.7
Q ss_pred ccEEEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEE-EecccCCCCCCCHHHHHHHHhcC
Q 018518 44 GQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSKSIKTFLMQIFEK 106 (354)
Q Consensus 44 g~r~~~~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~li-~~t~t~~~~~P~~a~~l~~~Lgl 106 (354)
-..-+|+..|+.+. .=++.|.+++|+++|+.|+|||.|= .+|+||.- --.=+..|.+-++-
T Consensus 287 s~Da~HiT~P~~dG-~Ga~~am~raL~~Agl~pe~i~YvNAHATST~~G-D~aE~~Ai~~vf~~ 348 (440)
T KOG1394|consen 287 SSDAYHITSPDPDG-AGAVLAMERALKDAGLSPEDIDYVNAHATSTPLG-DAAEAEAIKRVFGE 348 (440)
T ss_pred cccccccCCCCCCc-chHHHHHHHHHHHcCCChhhcCeeecccccCcCc-hHHHHHHHHHHhcc
Confidence 33444555554433 3567788999999999999999997 67777642 12223445566654
No 216
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=67.64 E-value=11 Score=37.49 Aligned_cols=42 Identities=7% Similarity=0.023 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcC
Q 018518 60 MSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK 106 (354)
Q Consensus 60 La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl 106 (354)
-...|++++|+++|++|+|||++-+.-+ +....-...+.||+
T Consensus 297 ~~~~a~~~a~~~agl~~~did~~ei~d~-----Fa~~~l~~~e~lg~ 338 (401)
T PRK08131 297 GPVEAIKKALARAGLTLDDMDIIEINEA-----FASQVLGCLKGLGV 338 (401)
T ss_pred hHHHHHHHHHHHcCCCHHHCCeehhccH-----HHHHHHHHHHHcCC
Confidence 3578999999999999999999875322 11223334567787
No 217
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=66.73 E-value=11 Score=37.31 Aligned_cols=78 Identities=13% Similarity=0.146 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEE-EecccCCCCCCCHHHHHHHHhcCcCCCCeeEEe----ecC-cChhHHHHHHHHHHH
Q 018518 61 SLTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVD----STN-ACYGGTAALFNCVNW 134 (354)
Q Consensus 61 a~~Aa~~aL~~ag~~~~dId~li-~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~d----i~~-~C~g~~~aL~~A~~~ 134 (354)
..+|+++||+++|++|+|||++. .+|.|+. .-+.-...+++.+|.. ..+++.-. +++ .+++++..+..+...
T Consensus 278 ~~~a~~~Al~~agi~~~dId~v~~hgtgt~~-~d~~E~~al~~~~~~~-~~~~~v~s~k~~~Gh~~~AsG~~~~i~~~l~ 355 (411)
T PRK07314 278 AARAMKLALKDAGINPEDIDYINAHGTSTPA-GDKAETQAIKRVFGEH-AYKVAVSSTKSMTGHLLGAAGAVEAIFSVLA 355 (411)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEccccCCcc-ccHHHHHHHHHHhccc-CCCCeeECccchhchhHHHHHHHHHHHHHHH
Confidence 46899999999999999999997 4555543 2233334456666631 02232222 233 344555555556666
Q ss_pred HHhCCC
Q 018518 135 VESASW 140 (354)
Q Consensus 135 l~sg~~ 140 (354)
++.+..
T Consensus 356 l~~~~i 361 (411)
T PRK07314 356 IRDQVI 361 (411)
T ss_pred HhCCCc
Confidence 666643
No 218
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=66.13 E-value=19 Score=35.70 Aligned_cols=45 Identities=9% Similarity=-0.127 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEE-EecccCCCCCCCHHHHHHHHhcC
Q 018518 60 MSLTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSKSIKTFLMQIFEK 106 (354)
Q Consensus 60 La~~Aa~~aL~~ag~~~~dId~li-~~t~t~~~~~P~~a~~l~~~Lgl 106 (354)
-..++.++||+++|+ ++|||+|. .+|.|+.. -..=...|.+.++.
T Consensus 281 ~~~~am~~AL~~Agl-~~~IdyI~ahgtgT~~~-D~~E~~Ai~~~f~~ 326 (398)
T PRK06519 281 DLEASLERLLKPAGG-LAAPTAVISGATGAHPA-TAEEKAALEAALAG 326 (398)
T ss_pred HHHHHHHHHHHHCCC-cccCCEEEeCCCCCCCc-cHHHHHHHHHHcCC
Confidence 446899999999999 89999988 45555432 12223445555554
No 219
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=66.12 E-value=11 Score=36.80 Aligned_cols=80 Identities=9% Similarity=0.151 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEE-ecccCCCCCCCHHHHHHHHhcCcCCCCeeEEe----ecC-cChhHHHHHHHHH
Q 018518 59 SMSLTVVTSLLEKYKIDPTQIGRLEV-GSETVIDKSKSIKTFLMQIFEKYGNTDIEGVD----STN-ACYGGTAALFNCV 132 (354)
Q Consensus 59 ~La~~Aa~~aL~~ag~~~~dId~li~-~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~d----i~~-~C~g~~~aL~~A~ 132 (354)
.-..++++++|+++|++++|||.|.. +|.|+. .-+.-...+.+.++.. ...++... +++ .+++++..|..+.
T Consensus 275 ~~~~~~i~~al~~agi~~~dId~v~~h~tgt~~-~d~~E~~al~~~~~~~-~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~ 352 (406)
T cd00834 275 EGAARAMRAALADAGLSPEDIDYINAHGTSTPL-NDAAESKAIKRVFGEH-AKKVPVSSTKSMTGHLLGAAGAVEAIATL 352 (406)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEecccccCcc-ccHHHHHHHHHHhccc-CCCCceeCcchhhccchhhhhHHHHHHHH
Confidence 45567999999999999999999985 444442 2233333455555431 01222222 233 5777777777788
Q ss_pred HHHHhCCC
Q 018518 133 NWVESASW 140 (354)
Q Consensus 133 ~~l~sg~~ 140 (354)
..++.|..
T Consensus 353 ~~l~~~~i 360 (406)
T cd00834 353 LALRDGVL 360 (406)
T ss_pred HHHhcCCc
Confidence 88887754
No 220
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=66.11 E-value=17 Score=34.33 Aligned_cols=85 Identities=14% Similarity=0.060 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCC-Cee-----EEe-ecC-cChhHHHHH
Q 018518 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT-DIE-----GVD-STN-ACYGGTAAL 128 (354)
Q Consensus 57 ~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~-~~~-----~~d-i~~-~C~g~~~aL 128 (354)
......++++++|++.+++ +|||.++...... |..-..+.++|++ ++ .+. .++ +++ +|++....|
T Consensus 221 ~~~~~~~~~~~~l~~~~~~-~~i~~~~~h~~~~----~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~Gn~~sa~~~~~L 293 (324)
T cd00827 221 AHKLIAKVVRKALDRAGLS-EDIDYFVPHQPNG----KKILEAVAKKLGG--PPEKASQTRWILLRRVGNMYAASILLGL 293 (324)
T ss_pred HhHHHHHHHHHHHHHcccc-cccceeeccCchH----HHHHHHHHHHccc--hHhhhccchhhHHHHhCchHHHHHHHHH
Confidence 3466778899999999999 9999887654322 1455678888887 21 222 122 333 666666666
Q ss_pred HHHHHHHHhCCC-CCCEEEEEEee
Q 018518 129 FNCVNWVESASW-DGRYGLVVCTD 151 (354)
Q Consensus 129 ~~A~~~l~sg~~-~~~~vLVV~~e 151 (354)
..+ ++.+.. +++++|+++.-
T Consensus 294 ~~~---~~~~~~~~Gd~vl~~~~G 314 (324)
T cd00827 294 ASL---LESGKLKAGDRVLLFSYG 314 (324)
T ss_pred HHH---HhcCCCCCCCEEEEEEec
Confidence 654 334421 45788887643
No 221
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=64.62 E-value=20 Score=35.48 Aligned_cols=79 Identities=6% Similarity=0.004 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEE-ecccCCCCCCCHHHHHHHHhcCcCCCCeeEEee----cC-cChhHHHHHHHH
Q 018518 58 ISMSLTVVTSLLEKYKIDPTQIGRLEV-GSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDS----TN-ACYGGTAALFNC 131 (354)
Q Consensus 58 ~~La~~Aa~~aL~~ag~~~~dId~li~-~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di----~~-~C~g~~~aL~~A 131 (354)
..-..+|.+++|+++|++|++||+|.. +|.|+.. -+.=...|.+-+|- ..++.-.+ ++ .+++++..+..+
T Consensus 269 ~~~~~~a~~~al~~ag~~~~~i~~v~~hgtgt~~~-D~~E~~al~~~fg~---~~~pv~s~K~~~Gh~~~aaG~~~l~~~ 344 (399)
T cd00832 269 PPGLARAIRLALADAGLTPEDVDVVFADAAGVPEL-DRAEAAALAAVFGP---RGVPVTAPKTMTGRLYAGGAPLDVATA 344 (399)
T ss_pred HHHHHHHHHHHHHHcCCCHHHccEEEeccCcCCCC-CHHHHHHHHHHhCC---CCCceeCCCchhcchHHHHHHHHHHHH
Confidence 344568999999999999999999874 4555432 23434556666664 22222222 22 344555555555
Q ss_pred HHHHHhCCC
Q 018518 132 VNWVESASW 140 (354)
Q Consensus 132 ~~~l~sg~~ 140 (354)
...++.+..
T Consensus 345 ~l~l~~~~i 353 (399)
T cd00832 345 LLALRDGVI 353 (399)
T ss_pred HHHHhCCCc
Confidence 666666643
No 222
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=63.48 E-value=14 Score=36.37 Aligned_cols=79 Identities=10% Similarity=0.132 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEE-ecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeec----C-cChhHHHHHHHHH
Q 018518 59 SMSLTVVTSLLEKYKIDPTQIGRLEV-GSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST----N-ACYGGTAALFNCV 132 (354)
Q Consensus 59 ~La~~Aa~~aL~~ag~~~~dId~li~-~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~----~-~C~g~~~aL~~A~ 132 (354)
.-..++.+++|+++|++|+|||.|.. +|.|+. .-+.-...+.+.++-.+ ..++...+. + ..++++..|..+.
T Consensus 274 ~~~~~a~~~Al~~Agi~~~dId~i~~hgtgt~~-~D~~E~~ai~~~~~~~~-~~~~v~s~K~~~Gh~~~Asg~~~l~~~~ 351 (407)
T cd00828 274 KGIARAIRTALAKAGLSLDDLDVISAHGTSTPA-NDVAESRAIAEVAGALG-APLPVTAQKALFGHSKGAAGALQLIGAL 351 (407)
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEecccccCcc-ccHHHHHHHHHHHhccC-CCceeecccchhccchhhhhHHHHHHHH
Confidence 55678999999999999999999984 455543 22333444555555311 123333332 2 3444444555555
Q ss_pred HHHHhCC
Q 018518 133 NWVESAS 139 (354)
Q Consensus 133 ~~l~sg~ 139 (354)
..++.+.
T Consensus 352 ~~l~~~~ 358 (407)
T cd00828 352 QSLEHGL 358 (407)
T ss_pred HHHhcCc
Confidence 5566553
No 223
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=63.00 E-value=24 Score=28.97 Aligned_cols=40 Identities=10% Similarity=0.108 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHhhhcCCCCccCcceeeccccchHHHHHHHHHhcch
Q 018518 223 SCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFN 268 (354)
Q Consensus 223 ~~~~~~l~~~~~~~~~g~~~~did~~v~Hq~n~~i~~~~~~~l~~~ 268 (354)
.+++.+++++ |++++|||.|=+|-+..-..-...+.|+++
T Consensus 26 ~A~~~al~~a------g~~~~did~~Ei~EaFA~~~l~~~~~lg~~ 65 (123)
T PF02803_consen 26 PAARKALERA------GLTPDDIDVIEINEAFAAQVLAFLEALGLD 65 (123)
T ss_dssp HHHHHHHHHH------T--GGGESEEEE--SBHHHHHHHHHHHTTG
T ss_pred HHHHHHHHHh------CCCccccchhhccchhhhHHHHhhcccccc
Confidence 4556677776 699999999999999988888888999875
No 224
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=62.86 E-value=16 Score=35.99 Aligned_cols=75 Identities=12% Similarity=0.198 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEE-ecccCCCCCCCHHHHHHHHhcCcCCCCeeEEe----ecC-cChhHHHHHHHHHHH
Q 018518 61 SLTVVTSLLEKYKIDPTQIGRLEV-GSETVIDKSKSIKTFLMQIFEKYGNTDIEGVD----STN-ACYGGTAALFNCVNW 134 (354)
Q Consensus 61 a~~Aa~~aL~~ag~~~~dId~li~-~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~d----i~~-~C~g~~~aL~~A~~~ 134 (354)
..++.++||+++|+.|+|||.+.. +|.|+.. -+.=...|.+.+|- +.+.-. +++ .+++++..+..+...
T Consensus 262 ~~~a~~~Al~~Agl~~~dId~v~~hgtgt~~~-D~~E~~al~~~f~~----~~pv~s~K~~~Gh~~~AaG~~~l~~~~~~ 336 (392)
T PRK09185 262 AILAMQQALADAGLAPADIGYINLHGTATPLN-DAMESRAVAAVFGD----GVPCSSTKGLTGHTLGAAGAVEAAICWLA 336 (392)
T ss_pred HHHHHHHHHHHcCCCHHHccEEEeCCCCCcCC-CHHHHHHHHHHhCC----CCceeCCCcccccChhhcchHHHHHHHHH
Confidence 358999999999999999999874 5555432 22223445555553 122222 233 455555556556666
Q ss_pred HHhCCC
Q 018518 135 VESASW 140 (354)
Q Consensus 135 l~sg~~ 140 (354)
++.|..
T Consensus 337 l~~~~i 342 (392)
T PRK09185 337 LRHGLP 342 (392)
T ss_pred HhcCCC
Confidence 676644
No 225
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=62.03 E-value=40 Score=27.02 Aligned_cols=35 Identities=20% Similarity=0.166 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHhhhcCCCCccCcceeeccccchHHHHHH
Q 018518 221 LDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKS 261 (354)
Q Consensus 221 ~~~~~~~~l~~~~~~~~~g~~~~did~~v~Hq~n~~i~~~~ 261 (354)
...++++.++.+ |++++|||++..|-.+....+.+
T Consensus 27 ~~~~i~~al~~a------gi~~~~I~~i~~hg~Gt~~~D~~ 61 (119)
T PF02801_consen 27 LARAIRRALADA------GISPEDIDYIEAHGTGTPLGDAA 61 (119)
T ss_dssp HHHHHHHHHHHH------TS-GGGEEEEE----SSHHHHHH
T ss_pred HHHHHHHHHhhh------ccccccceeeeeeccccccchhh
Confidence 345566666666 59999999999998888776665
No 226
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=61.32 E-value=23 Score=36.67 Aligned_cols=77 Identities=10% Similarity=0.118 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEE-EecccCCCCCCCHHHHHHHHhcCcCCCCeeEEe----ecC-cChhHHHHHHHHHHH
Q 018518 61 SLTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVD----STN-ACYGGTAALFNCVNW 134 (354)
Q Consensus 61 a~~Aa~~aL~~ag~~~~dId~li-~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~d----i~~-~C~g~~~aL~~A~~~ 134 (354)
..++.++||+++|++|+|||+|- .+|.|+.. -+.=...|.+.+|- .+.++.-. +++ -+++++..+..+...
T Consensus 407 ~~~am~~AL~~AGl~p~dIdyInaHGTGT~~g-D~~E~~Ai~~~Fg~--~~~~pV~S~Ks~iGH~~gAAGa~eli~~~la 483 (540)
T PLN02787 407 VILCIEKALAQSGVSKEDVNYINAHATSTKAG-DLKEYQALMRCFGQ--NPELRVNSTKSMIGHLLGAAGAVEAIATVQA 483 (540)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEccCccCCCC-CHHHHHHHHHHhCC--CCCceeeCCCCCcCCCcccchHHHHHHHHHH
Confidence 45899999999999999999987 45555532 22223445666664 22333322 233 333344444445555
Q ss_pred HHhCCC
Q 018518 135 VESASW 140 (354)
Q Consensus 135 l~sg~~ 140 (354)
|+.|..
T Consensus 484 l~~g~i 489 (540)
T PLN02787 484 IRTGWV 489 (540)
T ss_pred HhcCCc
Confidence 666643
No 227
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=60.50 E-value=26 Score=34.41 Aligned_cols=46 Identities=15% Similarity=0.315 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEE-ecccCCCCCCCHHHHHHHHhcC
Q 018518 60 MSLTVVTSLLEKYKIDPTQIGRLEV-GSETVIDKSKSIKTFLMQIFEK 106 (354)
Q Consensus 60 La~~Aa~~aL~~ag~~~~dId~li~-~t~t~~~~~P~~a~~l~~~Lgl 106 (354)
-..+++++||+++|++|+|||++.. +|.|+. .-+.-...+.+.+|-
T Consensus 276 ~~~~ai~~Al~~Agi~~~dId~ve~h~tgt~~-~D~~E~~a~~~~~~~ 322 (407)
T TIGR03150 276 GAARAMRAALKDAGINPEDVDYINAHGTSTPL-GDKAETKAIKRVFGD 322 (407)
T ss_pred HHHHHHHHHHHHcCCCHhHCCEEeCcCCCCCC-CCHHHHHHHHHHhcc
Confidence 3568999999999999999999974 444543 223434456666663
No 228
>TIGR01796 CM_mono_aroH monofunctional chorismate mutase, gram positive type, clade 1. This model represents a family of monofunctional (non-fused) chorismate mutases from gram positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus).
Probab=58.88 E-value=21 Score=29.07 Aligned_cols=58 Identities=12% Similarity=0.048 Sum_probs=36.2
Q ss_pred HHHHHHHHHH----HHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHh-cCcCCCCeeEEeecC
Q 018518 57 VISMSLTVVT----SLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIF-EKYGNTDIEGVDSTN 119 (354)
Q Consensus 57 ~~~La~~Aa~----~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~L-gl~g~~~~~~~di~~ 119 (354)
..+--.+|.+ +.+++.+++++||-.++| |.|+|-.. ..-+..++++ |. .+++-++...
T Consensus 14 t~e~I~~at~eLl~~ii~~N~l~~edivSv~F-T~T~DL~a-~FPA~aaR~~~Gw---~~Vplmc~qE 76 (117)
T TIGR01796 14 EAEEIGEAVAELLTELMERNELTPEDLISVIF-TVTEDLHA-DFPAAAARGLPGW---TDVPVMCAQE 76 (117)
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEE-EecCcccc-cChHHHHHhccCC---CCcceeccCc
Confidence 3344445555 445678999999999988 55676422 2223445566 87 6777776554
No 229
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=58.00 E-value=32 Score=34.24 Aligned_cols=81 Identities=10% Similarity=0.057 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHH-cCCCcCCcCEEEE-ecccCCCCCCCHHHHHHHHhcCcCCCCeeEEe----ecC-cChhHHHHHHHH
Q 018518 59 SMSLTVVTSLLEK-YKIDPTQIGRLEV-GSETVIDKSKSIKTFLMQIFEKYGNTDIEGVD----STN-ACYGGTAALFNC 131 (354)
Q Consensus 59 ~La~~Aa~~aL~~-ag~~~~dId~li~-~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~d----i~~-~C~g~~~aL~~A 131 (354)
.-..+|+++||++ +|++|+|||+|-. +|.|+. .-+.-...+.+.+|-...+.++.-. +++ ..++++..+..+
T Consensus 283 ~~~~~ai~~Al~~~Agi~~~dId~ie~hgtgt~~-~D~~E~~al~~~~~~~~~~~~~v~s~K~~~GH~~~AaG~~~l~~~ 361 (421)
T PTZ00050 283 RGARRCMENALKDGANININDVDYVNAHATSTPI-GDKIELKAIKKVFGDSGAPKLYVSSTKGGLGHLLGAAGAVESIVT 361 (421)
T ss_pred HHHHHHHHHHHHhccCCChhhCCEEECCCccCCC-CCHHHHHHHHHHhccccCCCceEECccccccccHHHHHHHHHHHH
Confidence 3457899999999 9999999999974 444432 2222223455556531001232222 222 334444455555
Q ss_pred HHHHHhCCC
Q 018518 132 VNWVESASW 140 (354)
Q Consensus 132 ~~~l~sg~~ 140 (354)
...|+.+..
T Consensus 362 ~l~l~~~~i 370 (421)
T PTZ00050 362 ILSLYEQII 370 (421)
T ss_pred HHHHHcCcc
Confidence 556666643
No 230
>PF07736 CM_1: Chorismate mutase type I; InterPro: IPR008243 Chorismate mutase (CM; 5.4.99.5 from EC) catalyses the reaction at the branch point of the biosynthetic pathway leading to the three aromatic amino acids, phenylalanine, tryptophan and tyrosine (chorismic acid is the last common intermediate, and CM leads to the L-phenylalanine/L-tyrosine branch). It is part of the shikimate pathway, which is present only in bacteria, fungi and plants. This entry represents a family of monofunctional (non-fused) chorismate mutases from Gram-positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus). They are monofunctional, homotrimeric, nonallosteric enzymes and are not regulated by the end-product aromatic amino acids. The three types of CM are AroQ class, Prokaryotic type (e.g., IPR008239 from INTERPRO amongst others); AroQ class, Eukaryotic type (IPR008238 from INTERPRO); and AroH class. They fall into two structural folds (AroQ class and AroH class) which are completely unrelated []. The two types of the AroQ structural class (the Escherichia coli CM dimer and the yeast CM monomer) can be structurally superimposed, and the topology of the four-helix bundle forming the active site is conserved []. For additional information please see [, , , , , , ].; PDB: 2CHS_K 2CHT_L 1COM_J 1FNJ_A 1FNK_A 1DBF_C 1UI9_A 1ODE_A 1UFY_A 1XHO_C ....
Probab=57.51 E-value=15 Score=30.01 Aligned_cols=47 Identities=13% Similarity=0.102 Sum_probs=28.6
Q ss_pred HHHHHHHcCCCcCCcCEEEEecccCCC--CCCCHHHHHHHHh-cCcCCCCeeEEeec
Q 018518 65 VTSLLEKYKIDPTQIGRLEVGSETVID--KSKSIKTFLMQIF-EKYGNTDIEGVDST 118 (354)
Q Consensus 65 a~~aL~~ag~~~~dId~li~~t~t~~~--~~P~~a~~l~~~L-gl~g~~~~~~~di~ 118 (354)
.++.+++.+++++||-.++| |.|+|- ..|+.+ .+++ |. .+++-|+..
T Consensus 26 l~~i~~~N~l~~~dIvSi~F-T~T~DL~a~fPA~a---~R~~~g~---~~Vpl~c~~ 75 (118)
T PF07736_consen 26 LEEILERNELSPEDIVSIIF-TVTPDLDAAFPAAA---ARELPGW---DDVPLMCAQ 75 (118)
T ss_dssp HHHHHHHTT--GGGEEEEEE-EE-TT--SS-TCHH---HHHTTTG---TTSEEEEEE
T ss_pred HHHHHHHcCCCHHHEEEEEE-EeCCCcCccChHHH---HHccCCC---CccceeccC
Confidence 34455678999999999998 566764 346554 4555 76 667777654
No 231
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=57.02 E-value=30 Score=33.59 Aligned_cols=78 Identities=12% Similarity=0.100 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCC-CeeE--Ee-ecC-cChhHHHHHHHHHH
Q 018518 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT-DIEG--VD-STN-ACYGGTAALFNCVN 133 (354)
Q Consensus 59 ~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~-~~~~--~d-i~~-~C~g~~~aL~~A~~ 133 (354)
.....+.+++|+++|++++|||.+++.-. .+.+-..+.++||+ ++ .+.. ++ .++ +.++...+|..+
T Consensus 242 ~~~~~~i~~~L~~~gl~~~did~~v~HQ~-----~~~i~~~i~~~Lgl--~~ek~~~~~l~~~GNtssasip~~L~~~-- 312 (353)
T PRK12880 242 ECEPKSFKEILEFSKVDEKDIAFHLFHQS-----NAYLVDCIKEELKL--NDDKVPNFIMEKYANLSACSLPALLCEL-- 312 (353)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCC-----CHHHHHHHHHHhCC--CHHHhhhhhHHhhCCHHHHHHHHHHHHH--
Confidence 34456889999999999999999998532 23445678999999 33 2321 23 233 555555666533
Q ss_pred HHHhCCCCCCEEEEEE
Q 018518 134 WVESASWDGRYGLVVC 149 (354)
Q Consensus 134 ~l~sg~~~~~~vLVV~ 149 (354)
+..+.. ++|+++
T Consensus 313 -~~~~~~---~~ll~~ 324 (353)
T PRK12880 313 -DTPKEF---KASLSA 324 (353)
T ss_pred -HHcCCc---EEEEEE
Confidence 555643 355444
No 232
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=56.52 E-value=31 Score=34.41 Aligned_cols=46 Identities=15% Similarity=0.287 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEE-EecccCCCCCCCHHHHHHHHhc
Q 018518 59 SMSLTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSKSIKTFLMQIFE 105 (354)
Q Consensus 59 ~La~~Aa~~aL~~ag~~~~dId~li-~~t~t~~~~~P~~a~~l~~~Lg 105 (354)
+=+.+|.+.||+++|++|+|||.|- .+|.|+.. -+.=+..|.+.+|
T Consensus 276 ~Ga~~am~~AL~~Agl~~~~idYinaHgTsT~~n-D~~E~~ai~~vfg 322 (412)
T COG0304 276 EGAIRAMRAALADAGLTPEDIDYINAHGTSTPAN-DKAESLAIKRVFG 322 (412)
T ss_pred chHHHHHHHHHHHcCCCHhHCCEEeCCCccCCCc-cHHHHHHHHHHhc
Confidence 3456999999999999999999999 56667643 3444445555666
No 233
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=55.48 E-value=28 Score=34.34 Aligned_cols=77 Identities=9% Similarity=0.196 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEE-EecccCCCCCCCHHHHHHHHhcCcCCCCeeEEee----cC-cChhHHHHHHHHH
Q 018518 59 SMSLTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDS----TN-ACYGGTAALFNCV 132 (354)
Q Consensus 59 ~La~~Aa~~aL~~ag~~~~dId~li-~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di----~~-~C~g~~~aL~~A~ 132 (354)
....+|.++||+++|++|+|||+|. .+|.|+.. -+.=...|++.+|- .++...+ ++ ..++++..+..+.
T Consensus 254 ~~~~~ai~~Al~~agi~p~dId~i~~hgtgt~~~-D~~E~~al~~~fg~----~~~v~s~K~~~GH~~~AaG~~~~~~~~ 328 (381)
T PRK05952 254 KSAIAAIQQCLARSGLTPEDIDYIHAHGTATRLN-DQREANLIQALFPH----RVAVSSTKGATGHTLGASGALGVAFSL 328 (381)
T ss_pred HHHHHHHHHHHHHhCCCHHHeeEEEccCCCCCCC-cHHHHHHHHHHcCC----CCeeecchhhhccChHHHHHHHHHHHH
Confidence 4578999999999999999999997 45555432 22223345554442 2333222 22 3344444555555
Q ss_pred HHHHhCCC
Q 018518 133 NWVESASW 140 (354)
Q Consensus 133 ~~l~sg~~ 140 (354)
..++.+..
T Consensus 329 ~~l~~~~i 336 (381)
T PRK05952 329 LALRHQQL 336 (381)
T ss_pred HHHhcCcc
Confidence 55666543
No 234
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=54.38 E-value=38 Score=33.84 Aligned_cols=79 Identities=14% Similarity=0.140 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEE-ecccCCCCCCCHHHHHHHHhcCcCCCCeeEEee----cC-cChhHHHHHHHHHH
Q 018518 60 MSLTVVTSLLEKYKIDPTQIGRLEV-GSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDS----TN-ACYGGTAALFNCVN 133 (354)
Q Consensus 60 La~~Aa~~aL~~ag~~~~dId~li~-~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di----~~-~C~g~~~aL~~A~~ 133 (354)
-..++.+++|+++|++|+|||.+.. +|.|+. ..+.=..-|.+.+|-. ..+++.-.+ ++ ..++++..+..+..
T Consensus 290 ~~~~ai~~AL~~agi~p~dId~i~~Hgtgt~~-~d~~E~~al~~~~~~~-~~~~pv~s~k~~~Gh~~~AsG~~~~~~~~l 367 (425)
T PRK06501 290 PAIGAIRAALADAGLTPEQIDYINAHGTSTPE-NDKMEYLGLSAVFGER-LASIPVSSNKSMIGHTLTAAGAVEAVFSLL 367 (425)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEecCccCcc-hHHHHHHHHHHHhccc-CCCcEEECCCcccCCCchhhhHHHHHHHHH
Confidence 3568899999999999999999985 444443 2233233344445421 122333222 22 23344445545555
Q ss_pred HHHhCCC
Q 018518 134 WVESASW 140 (354)
Q Consensus 134 ~l~sg~~ 140 (354)
.++.|..
T Consensus 368 ~l~~~~i 374 (425)
T PRK06501 368 TIQTGRL 374 (425)
T ss_pred HHhcCcC
Confidence 5666644
No 235
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=54.18 E-value=48 Score=33.01 Aligned_cols=80 Identities=10% Similarity=0.047 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEE-EecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeec----C-cChhHHHHHHHHHH
Q 018518 60 MSLTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST----N-ACYGGTAALFNCVN 133 (354)
Q Consensus 60 La~~Aa~~aL~~ag~~~~dId~li-~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~----~-~C~g~~~aL~~A~~ 133 (354)
...+|.+++|+++|++|+|||.|- .+|.|+. .-+.=...|.+.+|-.+.+.++.-.+. + -.++++..+..+..
T Consensus 279 ~~~~a~~~Al~~agi~~~did~ie~hgtgt~~-~D~~E~~al~~~fg~~~~~~~~v~s~K~~~GH~~~AaG~~~~~~~~l 357 (414)
T PRK08722 279 GGALAMEAAMRDAGVTGEQIGYVNAHGTSTPA-GDVAEIKGIKRALGEAGSKQVLVSSTKSMTGHLLGAAGSVEAIITVM 357 (414)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEccCccCCC-CCHHHHHHHHHHhcccCCCCceeeCcccccccchHHHHHHHHHHHHH
Confidence 457889999999999999999986 4555543 223334556666663111234333332 2 23344444444455
Q ss_pred HHHhCCC
Q 018518 134 WVESASW 140 (354)
Q Consensus 134 ~l~sg~~ 140 (354)
.++.|..
T Consensus 358 ~l~~~~i 364 (414)
T PRK08722 358 SLVDQIV 364 (414)
T ss_pred HHhcCcc
Confidence 5666643
No 236
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=53.71 E-value=37 Score=33.71 Aligned_cols=46 Identities=15% Similarity=0.169 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEE-EecccCCCCCCCHHHHHHHHhc
Q 018518 59 SMSLTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSKSIKTFLMQIFE 105 (354)
Q Consensus 59 ~La~~Aa~~aL~~ag~~~~dId~li-~~t~t~~~~~P~~a~~l~~~Lg 105 (354)
+-..++.+++|++++++|+|||.|. .+|.|+. .-+.=...|.+.+|
T Consensus 275 ~~~~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~-~D~~E~~Ai~~~fg 321 (405)
T PRK09116 275 ETMQIAMELALKDAGLAPEDIGYVNAHGTATDR-GDIAESQATAAVFG 321 (405)
T ss_pred HHHHHHHHHHHHHhCCCHHHcCEEECcCccCCC-CCHHHHHHHHHHhC
Confidence 3446899999999999999999997 4555543 23444556677776
No 237
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=52.70 E-value=56 Score=32.20 Aligned_cols=47 Identities=17% Similarity=0.333 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEE-ecccCCCCCCCHHHHHHHHhcC
Q 018518 59 SMSLTVVTSLLEKYKIDPTQIGRLEV-GSETVIDKSKSIKTFLMQIFEK 106 (354)
Q Consensus 59 ~La~~Aa~~aL~~ag~~~~dId~li~-~t~t~~~~~P~~a~~l~~~Lgl 106 (354)
....++++++|+++|+.++|||.+.. +|.|+.. -..-...+...+|.
T Consensus 279 ~~~~~a~~~al~~Agl~~~dId~i~~h~tgt~~~-d~~E~~al~~~~~~ 326 (424)
T smart00825 279 PAQARLIRQALARAGVDPADVDYVEAHGTGTPLG-DPIEAEALAAVFGQ 326 (424)
T ss_pred HHHHHHHHHHHHHhCCCHHHccEEEeeCCCCCCC-CHHHHHHHHHHHhc
Confidence 45578999999999999999999985 4555431 22223445555553
No 238
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=51.90 E-value=51 Score=32.32 Aligned_cols=82 Identities=16% Similarity=0.160 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEE-ecccCCCCCCCHHHHHHHHhcCcCC--CCeeEEe----ecC-cChhHHHHHH
Q 018518 58 ISMSLTVVTSLLEKYKIDPTQIGRLEV-GSETVIDKSKSIKTFLMQIFEKYGN--TDIEGVD----STN-ACYGGTAALF 129 (354)
Q Consensus 58 ~~La~~Aa~~aL~~ag~~~~dId~li~-~t~t~~~~~P~~a~~l~~~Lgl~g~--~~~~~~d----i~~-~C~g~~~aL~ 129 (354)
..-..+++++||+++|++++|||.+.. +|.|+.. -+.-...|...++-.++ ..++... +++ ..++++..|.
T Consensus 278 ~~~~~~a~~~al~~Agi~~~did~i~~hgtgt~~~-D~~E~~al~~~f~~~~~~~~~~~v~s~k~~~Gh~~~aag~~~l~ 356 (421)
T cd00833 278 GEAQAALIRRAYARAGVDPSDIDYVEAHGTGTPLG-DPIEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLI 356 (421)
T ss_pred HHHHHHHHHHHHHHhCCCHHHCcEEEeeCCCCCCC-CHHHHHHHHHHHhccCCCCCceeeecCcCccccchhhhHHHHHH
Confidence 455678999999999999999999985 4444322 12223344444443100 1122222 222 3444455555
Q ss_pred HHHHHHHhCCC
Q 018518 130 NCVNWVESASW 140 (354)
Q Consensus 130 ~A~~~l~sg~~ 140 (354)
.+...++.+..
T Consensus 357 ~~~~~l~~~~i 367 (421)
T cd00833 357 KVVLALEHGVI 367 (421)
T ss_pred HHHHHHhcCCc
Confidence 66666776643
No 239
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=48.45 E-value=49 Score=32.78 Aligned_cols=46 Identities=13% Similarity=0.171 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEE-EecccCCCCCCCHHHHHHHHhc
Q 018518 59 SMSLTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSKSIKTFLMQIFE 105 (354)
Q Consensus 59 ~La~~Aa~~aL~~ag~~~~dId~li-~~t~t~~~~~P~~a~~l~~~Lg 105 (354)
.-..+|+++||+++|++|+|||.|- .+|.|+. .-+.=...+.+.+|
T Consensus 288 ~~~~~a~~~Al~~Agi~p~dId~i~~hgtgt~~-~D~~E~~al~~~fg 334 (424)
T PRK06333 288 EGARRAMLIALRQAGIPPEEVQHLNAHATSTPV-GDLGEVAAIKKVFG 334 (424)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEeccCCCCcc-chHHHHHHHHHHhC
Confidence 4457899999999999999999997 4554543 12233345566665
No 240
>PLN03169 chalcone synthase family protein; Provisional
Probab=48.36 E-value=50 Score=32.63 Aligned_cols=80 Identities=16% Similarity=0.133 Sum_probs=48.3
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCC-ee----EE-eecC-cChhHHHHHHHHHHH
Q 018518 62 LTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTD-IE----GV-DSTN-ACYGGTAALFNCVNW 134 (354)
Q Consensus 62 ~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~-~~----~~-di~~-~C~g~~~aL~~A~~~ 134 (354)
...++++|+++|++++|||-+.++-.. .-+.+-..++++||+ ++. +. .+ +.+| ++++-..+|..+.
T Consensus 284 ~~~i~~~L~~~gl~~~did~~~~v~Hq---~n~~il~~v~~~Lgl--~~ek~~~s~~~l~~~GNtsSasip~~L~~~~-- 356 (391)
T PLN03169 284 EGFCKKLMKKAGLVEKDYNDLFWAVHP---GGPAILNRLEKKLKL--APEKLECSRRALMDYGNVSSNTIVYVLEYMR-- 356 (391)
T ss_pred HHHHHHHHHHcCCCCCCCCcceEEecC---CCHHHHHHHHHHcCC--CHHHHHHHHHHHHHhCCchHhHHHHHHHHHH--
Confidence 345688999999999999943322211 124556678999999 433 22 12 3444 7777777886654
Q ss_pred HHhCCC----CCCEEEEEE
Q 018518 135 VESASW----DGRYGLVVC 149 (354)
Q Consensus 135 l~sg~~----~~~~vLVV~ 149 (354)
+.+.. +++++|+++
T Consensus 357 -~~~~~~~~~~gd~~ll~a 374 (391)
T PLN03169 357 -EELKKKGEEDEEWGLILA 374 (391)
T ss_pred -HhhcccCCCCCcEEEEEE
Confidence 33221 236777665
No 241
>PRK09604 UGMP family protein; Validated
Probab=46.85 E-value=50 Score=31.85 Aligned_cols=29 Identities=10% Similarity=0.221 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEec
Q 018518 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGS 86 (354)
Q Consensus 58 ~~La~~Aa~~aL~~ag~~~~dId~li~~t 86 (354)
.+......+++|+++|++++|||.|.+..
T Consensus 52 ~~~l~~~i~~~L~~~~~~~~did~iavt~ 80 (332)
T PRK09604 52 VENIVPLIEEALKEAGLTLEDIDAIAVTA 80 (332)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEec
Confidence 46677889999999999999999998754
No 242
>cd02185 AroH Chorismate mutase (AroH) is one of at least five chorismate-utilizing enzymes present in microorganisms that catalyze the rearrangement of chorismate to prephenic acid, the first committed step in the biosynthesis of aromatic amino acids. In prokaryotes, chorismate mutase may be fused to prephenate dehydratase, prephenate dehydrogenase, or 3-deoxy-D-arabino-heptulosonat-7-phosphate (DAHP) as part of a bifunctional enzyme. The AroH domain forms a homotrimer with three-fold symmetry.
Probab=46.05 E-value=35 Score=27.79 Aligned_cols=59 Identities=10% Similarity=0.019 Sum_probs=36.1
Q ss_pred HHHHHHHHHH----HHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecC
Q 018518 57 VISMSLTVVT----SLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTN 119 (354)
Q Consensus 57 ~~~La~~Aa~----~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~ 119 (354)
..+--.+|.+ +.+++.+++++||-.++| |.|+|-. -..-+..++++|. ..+++-++...
T Consensus 14 t~e~I~~at~eLl~~i~~~N~l~~edivSv~F-T~T~DL~-a~FPA~aaR~~~~--~~~Vplmc~qE 76 (117)
T cd02185 14 TAEEILEATRELLEEIIERNNIKPEDIISVIF-TVTPDLD-AAFPAKAARELGG--WKYVPLMCAQE 76 (117)
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEE-EeCCccc-ccChHHHHHhcCC--CCCcceeecCc
Confidence 3344445555 445678999999999988 5667642 1222445666654 35677776554
No 243
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=45.44 E-value=72 Score=31.95 Aligned_cols=46 Identities=13% Similarity=0.249 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEE-ecccCCCCCCCHHHHHHHHhc
Q 018518 59 SMSLTVVTSLLEKYKIDPTQIGRLEV-GSETVIDKSKSIKTFLMQIFE 105 (354)
Q Consensus 59 ~La~~Aa~~aL~~ag~~~~dId~li~-~t~t~~~~~P~~a~~l~~~Lg 105 (354)
.-..+|+++||+++|++|+|||.|-. +|.|+.. -+.=...+...+|
T Consensus 299 ~~~~~a~~~Al~~Agi~~~dId~ve~hgtgt~~~-D~~E~~ai~~~~~ 345 (437)
T PLN02836 299 RGAVLAMTRALQQSGLHPNQVDYVNAHATSTPLG-DAVEARAIKTVFS 345 (437)
T ss_pred HHHHHHHHHHHHHcCCCHhHcCEEEccCCcCcCc-CHHHHHHHHHHhc
Confidence 34568999999999999999999874 4555432 2222333455554
No 244
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=44.70 E-value=24 Score=35.32 Aligned_cols=25 Identities=16% Similarity=0.302 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEe
Q 018518 61 SLTVVTSLLEKYKIDPTQIGRLEVG 85 (354)
Q Consensus 61 a~~Aa~~aL~~ag~~~~dId~li~~ 85 (354)
...|+++||+++|++|+|||++-+.
T Consensus 309 ~~~a~~~al~~aGl~~~did~~ei~ 333 (426)
T PRK08170 309 PVHAATPLLQRHGLTLEDLDLWEIN 333 (426)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEec
Confidence 4689999999999999999998764
No 245
>COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=42.48 E-value=75 Score=28.76 Aligned_cols=62 Identities=10% Similarity=0.070 Sum_probs=41.8
Q ss_pred CCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeec
Q 018518 55 EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST 118 (354)
Q Consensus 55 e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~ 118 (354)
..-.+......+++|.++|+++.|||.|+++..=|-+..=-++.-+++-|.+ ..+++.+-++
T Consensus 35 r~hse~l~~~i~~ll~~~~~~~~dld~iav~~GPGSFTGlRIG~~~AkgLA~--~l~iplvgvs 96 (220)
T COG1214 35 RNHAERLMPMIDELLKEAGLSLQDLDAIAVAKGPGSFTGLRIGVAFAKGLAL--ALNIPLVGVS 96 (220)
T ss_pred ccHHHHHHHHHHHHHHHcCCCHHHCCEEEEccCCCcccchhhHHHHHHHHHH--HcCCCEEEeC
Confidence 3456788899999999999999999999985432222112234555555665 3456666654
No 246
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=40.92 E-value=64 Score=31.96 Aligned_cols=29 Identities=17% Similarity=0.393 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEE-EecccC
Q 018518 61 SLTVVTSLLEKYKIDPTQIGRLE-VGSETV 89 (354)
Q Consensus 61 a~~Aa~~aL~~ag~~~~dId~li-~~t~t~ 89 (354)
..+++++||+++|++|+|||+|. .+|.|+
T Consensus 283 ~~~a~~~Al~~Agi~~~dId~v~~hgtgt~ 312 (410)
T PRK07103 283 EMRVIRAALRRAGLGPEDIDYVNPHGTGSP 312 (410)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEccCCCCC
Confidence 35899999999999999999987 455554
No 247
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=40.61 E-value=35 Score=31.93 Aligned_cols=46 Identities=11% Similarity=0.160 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcC
Q 018518 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYG 108 (354)
Q Consensus 58 ~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g 108 (354)
.||...|++++.++.|+.|+||+.|-..-|.... .-.--+.|||++
T Consensus 271 fdm~~~aa~~l~aksgltpndvqvielhdcfs~n-----elityealglcp 316 (408)
T KOG1406|consen 271 FDMTRLAAKRLFAKSGLTPNDVQVIELHDCFSAN-----ELITYEALGLCP 316 (408)
T ss_pred chHHHHHHHHHHHHcCCCcccceEEEeecccchh-----hhhhHHHhcCCC
Confidence 4899999999999999999999999876653321 222346688853
No 248
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed
Probab=39.53 E-value=75 Score=31.22 Aligned_cols=49 Identities=14% Similarity=0.182 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCC--------HHHHHHHHhcC
Q 018518 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKS--------IKTFLMQIFEK 106 (354)
Q Consensus 57 ~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~--------~a~~l~~~Lgl 106 (354)
...+-.+|++++++++++++++||+|=+.-+|-.+ .|. -...|+.++|+
T Consensus 69 lg~~~a~av~~~~~~~~l~~~~id~IgsHGQTv~H-~P~~~~TlQiG~~~~iA~~tgi 125 (365)
T PRK09585 69 LGRLFAEAVNALLAEAGLSPEDIDAIGSHGQTVRH-RPGEGFTLQIGDGALIAELTGI 125 (365)
T ss_pred HHHHHHHHHHHHHHHcCCCccCccEEEeCCccccc-CCCCCCeEEcCCHHHHHHHHCc
Confidence 34677899999999999999999999887776543 342 46789999998
No 249
>PRK14878 UGMP family protein; Provisional
Probab=37.29 E-value=1.1e+02 Score=29.34 Aligned_cols=27 Identities=22% Similarity=0.274 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEec
Q 018518 60 MSLTVVTSLLEKYKIDPTQIGRLEVGS 86 (354)
Q Consensus 60 La~~Aa~~aL~~ag~~~~dId~li~~t 86 (354)
.-..+.+++|+++|++++|||.|.+..
T Consensus 47 ~l~~~i~~~l~~a~~~~~did~Iavt~ 73 (323)
T PRK14878 47 VAPELLRKALEKAGISIEDIDAVAVSQ 73 (323)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEec
Confidence 344889999999999999999998754
No 250
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family. This subfamily includes the well-studied secreted O-sialoglycoprotein endopeptidase (glycoprotease, EC 3.4.24.57) of Pasteurella haemolytica, a pathogen. A member from Riemerella anatipestifer, associated with cohemolysin activity, likewise is exported without benefit of a classical signal peptide and shows glycoprotease activity on the test substrate glycophorin. However, archaeal members of this subfamily show unrelated activities as demonstrated in Pyrococcus abyssi: DNA binding, iron binding, apurinic endonuclease activity, genomic association with a kinase domain, and no glycoprotease activity. This family thus pulls together a set of proteins as a homology group that appears to be near-universal in life, yet heterogeneous in assayed function between bacteria and archaea.
Probab=36.31 E-value=45 Score=31.69 Aligned_cols=29 Identities=10% Similarity=0.115 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEec
Q 018518 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGS 86 (354)
Q Consensus 58 ~~La~~Aa~~aL~~ag~~~~dId~li~~t 86 (354)
.+......+++|+++|++++|||.|.++.
T Consensus 49 ~~~l~~~i~~~l~~~~~~~~did~iav~~ 77 (305)
T TIGR00329 49 AENIPPLLERALIESNVDKSEIDLIAYTQ 77 (305)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEec
Confidence 45666778999999999999999998754
No 251
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=35.46 E-value=65 Score=31.24 Aligned_cols=83 Identities=10% Similarity=0.067 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCH--HHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHHHHHh
Q 018518 60 MSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSI--KTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVES 137 (354)
Q Consensus 60 La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~--a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~~l~s 137 (354)
-.....+++|+++|++.+|||+|-+ |..|- ..+++ ....++.|.+ .-+.+.+.|++ |-|=+++-. +..
T Consensus 53 ~i~~li~~al~eA~~~~~dID~IA~-T~gPG-L~gaL~VG~~~Ak~LA~--a~~kPli~VnH-~~gHi~a~~-----l~~ 122 (342)
T COG0533 53 NIPPLIEEALAEAGVSLEDIDAIAV-TAGPG-LGGALLVGATAAKALAL--ALNKPLIPVNH-LEGHIEAAR-----LET 122 (342)
T ss_pred HHHHHHHHHHHHcCCCcccCCEEEE-ecCCC-chhHHHHHHHHHHHHHH--HhCCCEeecch-HHHHHHHHH-----hcc
Confidence 3456788999999999999999986 45443 34443 2334555544 23444555544 444443332 222
Q ss_pred C-CCCCCEEEEEEeecc
Q 018518 138 A-SWDGRYGLVVCTDSA 153 (354)
Q Consensus 138 g-~~~~~~vLVV~~e~~ 153 (354)
+ .+| -.+|+|++-..
T Consensus 123 ~~~~p-~v~LlVSGGHT 138 (342)
T COG0533 123 GLAFP-PVALLVSGGHT 138 (342)
T ss_pred CCCCC-cEEEEEecCce
Confidence 2 322 45677766544
No 252
>TIGR01991 HscA Fe-S protein assembly chaperone HscA. The Heat Shock Cognate proteins HscA and HscB act together as chaperones. HscA resembles DnaK but belongs in a separate clade. The apparent function is to aid assembly of iron-sulfur cluster proteins. Homologs from Buchnera and Wolbachia are clearly in the same clade but are highly derived and score lower than some examples of DnaK.
Probab=34.84 E-value=1.4e+02 Score=31.38 Aligned_cols=45 Identities=9% Similarity=0.212 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcC
Q 018518 60 MSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK 106 (354)
Q Consensus 60 La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl 106 (354)
=..+.++++|+++++.+++||.|+++-.+. .+|.+...|.+.+|.
T Consensus 294 ~i~~~i~~~L~~a~~~~~~id~ViLvGGss--riP~V~~~l~~~f~~ 338 (599)
T TIGR01991 294 KTLSICRRALRDAGLSVEEIKGVVLVGGST--RMPLVRRAVAELFGQ 338 (599)
T ss_pred HHHHHHHHHHHHcCCChhhCCEEEEECCcC--CChHHHHHHHHHhCC
Confidence 345677899999999999999999765443 479999999999886
No 253
>PRK05183 hscA chaperone protein HscA; Provisional
Probab=34.84 E-value=1.3e+02 Score=31.64 Aligned_cols=44 Identities=7% Similarity=0.200 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcC
Q 018518 61 SLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK 106 (354)
Q Consensus 61 a~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl 106 (354)
..+.++++|+++++.+++||.|+++-.+. .+|.+...|.+.+|.
T Consensus 311 ~~~~i~~~L~~a~~~~~~i~~ViLvGGss--riP~v~~~l~~~fg~ 354 (616)
T PRK05183 311 TLLACRRALRDAGVEADEVKEVVMVGGST--RVPLVREAVGEFFGR 354 (616)
T ss_pred HHHHHHHHHHHcCCCcccCCEEEEECCcc--cChHHHHHHHHHhcc
Confidence 45667899999999999999999765443 479999999999886
No 254
>TIGR02177 PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family. Several related four-subunit enzymes may exist in the same species. This model describes a subfamily of beta subunits, representing mostly pyruvate and 2-ketoisovalerate specific enzymes.
Probab=34.28 E-value=1.9e+02 Score=27.38 Aligned_cols=20 Identities=25% Similarity=0.459 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHcCCCcCCc
Q 018518 60 MSLTVVTSLLEKYKIDPTQI 79 (354)
Q Consensus 60 La~~Aa~~aL~~ag~~~~dI 79 (354)
....|..++|++.+++|+|.
T Consensus 11 ~i~~~~~~a~~~l~~~p~d~ 30 (287)
T TIGR02177 11 GILSALQRALAELNLDPEQV 30 (287)
T ss_pred HHHHHHHHHHHHhcCCCCCE
Confidence 45688999999999998863
No 255
>TIGR03725 bact_YeaZ universal bacterial protein YeaZ. This family describes a protein family, YeaZ, that appears to be universal in bacteria, but whose function is unknown. This family is related to the gcp (glycoprotease) protein family, also universal in bacteria and unknown in function. In Gram-positive lineages, members of these two related families often belong to the same operon, along with the ribosomal-protein-alanine acetyltransferase gene. Members of this family may occur as fusions with gcp or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI.
Probab=33.74 E-value=51 Score=29.24 Aligned_cols=31 Identities=16% Similarity=0.322 Sum_probs=26.6
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCcCEEEEec
Q 018518 56 DVISMSLTVVTSLLEKYKIDPTQIGRLEVGS 86 (354)
Q Consensus 56 ~~~~La~~Aa~~aL~~ag~~~~dId~li~~t 86 (354)
.-.+......+++|++++++++|||.|+++.
T Consensus 32 ~h~~~l~~~i~~~l~~~~~~~~~i~~iav~~ 62 (202)
T TIGR03725 32 NHSEILLPMIEELLAEAGLSLQDLDAIAVGV 62 (202)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEec
Confidence 3556777889999999999999999999865
No 256
>COG4126 Hydantoin racemase [Amino acid transport and metabolism]
Probab=31.57 E-value=3.8e+02 Score=24.48 Aligned_cols=106 Identities=13% Similarity=0.072 Sum_probs=64.9
Q ss_pred EEEEEcCCccccHHHHHHhhCCCcchhe-eccccEEEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCC
Q 018518 13 ALDIYFPPTCVLQEALEVHDGVSKGKYT-VGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVID 91 (354)
Q Consensus 13 ~ig~~lP~~~v~~e~l~~~~~~~~~~~~-~gig~r~~~~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~ 91 (354)
++-+-.|+.+.-.+++.+.+|++..... .-++..-.....+.+....+....+++++++-| -|.|+.+ |.+.
T Consensus 113 sViTtt~rs~~il~~lv~~~g~s~~~~~vrstdl~vL~l~~~~~~~~~~l~~~~~~a~~edg-----AeaIiLG-CAGm- 185 (230)
T COG4126 113 SVITTTERSRPILEELVRSYGLSRHCRSVRSTDLPVLALEGPPEEAEALLVIEAAEALKEDG-----AEAIILG-CAGM- 185 (230)
T ss_pred EEEecCcccHHHHHHHHHhcCccccccceeeCCCCcccccCChHHHHHHHHHHHHHHhhhcC-----CCEEEEc-CccH-
Confidence 5566777777777788777776543321 112221122233445566777777888777644 6788876 4442
Q ss_pred CCCCHHHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHHHHHhCC
Q 018518 92 KSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESAS 139 (354)
Q Consensus 92 ~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~~l~sg~ 139 (354)
-.++..||..+|. | .+| |-..|..++..+++.+.
T Consensus 186 --s~la~~Lq~~~gv---P---VID------gv~Aav~~a~~L~~~~~ 219 (230)
T COG4126 186 --SDLADQLQKAFGV---P---VID------GVAAAVKLAEGLLGMGL 219 (230)
T ss_pred --HHHHHHHHHHhCC---C---ccc------chHHHHHHHHHHHhhch
Confidence 3568899999986 2 343 34456677777777663
No 257
>PRK13410 molecular chaperone DnaK; Provisional
Probab=31.15 E-value=1.1e+02 Score=32.63 Aligned_cols=47 Identities=11% Similarity=0.241 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcC
Q 018518 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK 106 (354)
Q Consensus 58 ~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl 106 (354)
.+-..+.++++|+++|+.+++||.|+++-.+. .+|.+...|...+|.
T Consensus 308 ~~r~~~~i~~~L~~ag~~~~dId~VvLVGGss--RiP~V~~~l~~~fg~ 354 (668)
T PRK13410 308 LDRLLRPVKRALKDAGLSPEDIDEVVLVGGST--RMPMVQQLVRTLIPR 354 (668)
T ss_pred HHHHHHHHHHHHHHcCCChhhCcEEEEECCcc--ccHHHHHHHHHHcCC
Confidence 34456678899999999999999998755443 479999999988885
No 258
>PLN02854 3-ketoacyl-CoA synthase
Probab=30.25 E-value=2.2e+02 Score=29.37 Aligned_cols=81 Identities=12% Similarity=0.039 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHcCCCc------CCcCEEEEecccCCCCCCCHHHHHHHHhcCcCC-CCeeEEee---cC-cChhHHHHHH
Q 018518 61 SLTVVTSLLEKYKIDP------TQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGN-TDIEGVDS---TN-ACYGGTAALF 129 (354)
Q Consensus 61 a~~Aa~~aL~~ag~~~------~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~-~~~~~~di---~~-~C~g~~~aL~ 129 (354)
+...+++.|.++|+.+ .+||+++.... -+.+--.+++.||+... .......+ +| +.++..++|.
T Consensus 387 ~~~~i~~~L~~~gl~~~~pd~~~didhf~iHqg-----gr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSASI~~~L~ 461 (521)
T PLN02854 387 FVTLVRRKLLKAKVKPYIPDFKLAFEHFCIHAG-----GRAVLDELQKNLQLSDWHMEPSRMTLHRFGNTSSSSLWYELA 461 (521)
T ss_pred HHHHHHHHHHHcCCCccCCcccccCcEEEECCC-----CHHHHHHHHHHcCCCcccccchHHHhhhcCChHhhHHHHHHH
Confidence 4667888899999987 58998876422 23444578999999210 12212222 22 3344444554
Q ss_pred HHHHHHHhCCC-CCCEEEEEE
Q 018518 130 NCVNWVESASW-DGRYGLVVC 149 (354)
Q Consensus 130 ~A~~~l~sg~~-~~~~vLVV~ 149 (354)
.+ .+.|+. +|++++.++
T Consensus 462 ~~---~~kGrik~GD~Vl~ia 479 (521)
T PLN02854 462 YT---EAKGRVSAGDRVWQIA 479 (521)
T ss_pred HH---HHcCCCCCCCEEEEEE
Confidence 43 344532 456677665
No 259
>PTZ00186 heat shock 70 kDa precursor protein; Provisional
Probab=29.77 E-value=1.3e+02 Score=32.05 Aligned_cols=45 Identities=9% Similarity=0.164 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcC
Q 018518 60 MSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK 106 (354)
Q Consensus 60 La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl 106 (354)
=....++++|+++|+++++||.|+++-.+. .+|.+-..|.+.+|.
T Consensus 335 r~~~~v~~~L~~a~~~~~dId~VvLVGGss--riP~V~~~l~~~fg~ 379 (657)
T PTZ00186 335 RSIAPCKQCMKDAGVELKEINDVVLVGGMT--RMPKVVEEVKKFFQK 379 (657)
T ss_pred HHHHHHHHHHHHcCCChhhCCEEEEECCcc--cChHHHHHHHHHhCC
Confidence 345668889999999999999999755433 479999999999985
No 260
>KOG2707 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=29.11 E-value=59 Score=31.72 Aligned_cols=28 Identities=11% Similarity=0.227 Sum_probs=23.2
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEEecccCC
Q 018518 62 LTVVTSLLEKYKIDPTQIGRLEVGSETVI 90 (354)
Q Consensus 62 ~~Aa~~aL~~ag~~~~dId~li~~t~t~~ 90 (354)
.+..++||+++++.|.|+|+|.+ |..|-
T Consensus 87 ~~~iqral~aa~~~p~dldaIAV-T~gPG 114 (405)
T KOG2707|consen 87 PRLIQRALDAAGLSPKDLDAIAV-TRGPG 114 (405)
T ss_pred HHHHHHHHHHcCCCcccceeEEE-ecCCC
Confidence 46789999999999999999976 55554
No 261
>PF01890 CbiG_C: Cobalamin synthesis G C-terminus; InterPro: IPR002750 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. CbiG proteins are specific for anaerobic cobalamin biosynthesis. CbiG, which shows homology with CobE of the aerobic pathway, participates in the conversion of cobalt-precorrin 5 into cobalt-precorrin 6 []. CbiG is responsible for the opening of the delta-lactone ring and extrusion of the C2-unit []. The aerobic pathway uses molecular oxygen to trigger the events at C-20 leading to contraction and expulsion of the C2-unit as acetic acid from a metal-free intermediate, whereas the anaerobic route involves the internal delivery of oxygen from a carboxylic acid terminus to C-20 followed by extrusion of the C2-unit as acetaldehyde, using cobalt complexes as substrates []. This entry represents the core domain of CibG.; GO: 0009236 cobalamin biosynthetic process; PDB: 3BY5_A 2W6K_A 2W6L_A 3EEQ_B.
Probab=28.27 E-value=59 Score=26.46 Aligned_cols=56 Identities=11% Similarity=0.059 Sum_probs=34.8
Q ss_pred eccccEEEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcC
Q 018518 41 VGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK 106 (354)
Q Consensus 41 ~gig~r~~~~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl 106 (354)
.|+|.|+ + ...+...++.+++|++.++++.+|+.|.....-.+ .|++ ..+++++|.
T Consensus 4 ~GiGcrr------~-~~~~~i~~ai~~~l~~~~~~~~~i~~iasi~~K~~--E~~l-~~~A~~l~~ 59 (121)
T PF01890_consen 4 LGIGCRR------G-APAEEIEEAIEQALAEAGLSPRSIAAIASIDIKAD--EPGL-LELAEELGI 59 (121)
T ss_dssp EEEEE-S------S---HHHHHHHHHHHHHHCT--GGGEEEEEESSSSS----HHH-HHHHHHCTS
T ss_pred EEeCcCC------C-CCHHHHHHHHHHHHHHcCCChhhccEEEeccccCC--CHHH-HHHHHHhCC
Confidence 5788764 2 34467789999999999999999999965544332 3433 345666765
No 262
>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=28.11 E-value=1e+02 Score=28.35 Aligned_cols=84 Identities=14% Similarity=0.069 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCH-HHHHHHHhcCcCCCCeeEEeecCcChhHHHHHHHHHHHHHhC
Q 018518 60 MSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSI-KTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESA 138 (354)
Q Consensus 60 La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~-a~~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A~~~l~sg 138 (354)
-...-.+.+|++++++++|||.+-+ |-.|-...|-. .+.+++-|-+. -+.+-+.+ +-|-|-+ .+... +...
T Consensus 52 ~il~Lv~~al~ea~v~~~diD~icy-TKGPGmgaPL~~vaivaRtlsll--w~kPlv~V-NHCigHI---EMGR~-iTgA 123 (336)
T KOG2708|consen 52 WILGLVKQALEEAGVTSDDIDCICY-TKGPGMGAPLSVVAIVARTLSLL--WNKPLVGV-NHCIGHI---EMGRE-ITGA 123 (336)
T ss_pred HHHHHHHHHHHHcCCChhhCCEEEE-cCCCCCCCchhhHHHHHHHHHHH--hCCCcccc-hhhhhhh---hhcce-eccC
Confidence 3445578899999999999999876 44455555533 35566666541 22333332 3465533 22222 2211
Q ss_pred CCCCCEEEEEEeecc
Q 018518 139 SWDGRYGLVVCTDSA 153 (354)
Q Consensus 139 ~~~~~~vLVV~~e~~ 153 (354)
..-.||-|++-..
T Consensus 124 --~nPvvLYvSGGNT 136 (336)
T KOG2708|consen 124 --QNPVVLYVSGGNT 136 (336)
T ss_pred --CCCEEEEEeCCce
Confidence 1246777766554
No 263
>PLN03171 chalcone synthase-like protein; Provisional
Probab=27.53 E-value=2.3e+02 Score=28.00 Aligned_cols=86 Identities=14% Similarity=-0.005 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHHH---------cCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCC-ee----EE-eecC-c
Q 018518 57 VISMSLTVVTSLLEK---------YKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTD-IE----GV-DSTN-A 120 (354)
Q Consensus 57 ~~~La~~Aa~~aL~~---------ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~-~~----~~-di~~-~ 120 (354)
...+..++.+++|++ .|++++||+.++ .+. -+.+-..+.++||+ ++. .. .+ +.++ +
T Consensus 277 vp~~i~~~l~~~l~~~l~~~~~~~~g~~~~di~~~~--Hq~----~~~il~~v~~~Lgl--~~ek~~~s~~~l~~yGNts 348 (399)
T PLN03171 277 VPGLIGDNIERCLLDAFAPLLGGDGGAEWNDLFWAV--HPG----SSAILDQVDAALGL--EPEKLAASRRVLSDYGNMF 348 (399)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccccCCCcccceEEE--cCC----cHHHHHHHHHHcCC--CHHHhHHHHHHHHHhCcch
Confidence 445665666777665 578889998763 322 23556678999999 333 21 12 2333 5
Q ss_pred ChhHHHHHHHHHHHHHhCCCCC---CEEEEEEe
Q 018518 121 CYGGTAALFNCVNWVESASWDG---RYGLVVCT 150 (354)
Q Consensus 121 C~g~~~aL~~A~~~l~sg~~~~---~~vLVV~~ 150 (354)
+++-..+|..+..-.+.+..++ +++|+++.
T Consensus 349 saSip~~L~~~~~~~~~~~~~G~~~d~vll~~f 381 (399)
T PLN03171 349 GATVIFALDELRRQMEEAAAAGAWPELGVMMAF 381 (399)
T ss_pred hhhHHHHHHHHHhhHhhcCCCCCCcceEEEEEE
Confidence 5666667765543221110133 57777653
No 264
>PLN03184 chloroplast Hsp70; Provisional
Probab=27.51 E-value=1.3e+02 Score=32.18 Aligned_cols=46 Identities=13% Similarity=0.168 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcC
Q 018518 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK 106 (354)
Q Consensus 59 ~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl 106 (354)
+-..+.++++|+++++++++||.|+++-.+. .+|.+-..|...+|.
T Consensus 346 ~r~~~~i~~~L~~a~~~~~dId~ViLvGGss--riP~V~~~i~~~fg~ 391 (673)
T PLN03184 346 DRCKTPVENALRDAKLSFKDIDEVILVGGST--RIPAVQELVKKLTGK 391 (673)
T ss_pred HHHHHHHHHHHHHcCCChhHccEEEEECCcc--ccHHHHHHHHHHhCC
Confidence 3345668889999999999999999765443 479999999999986
No 265
>PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase (3.4.24.57 from EC) from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues []. Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 [, ]. Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion [, ]. Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis []. The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 2A6A_A 2GEL_G 2GEM_B 1OKJ_B 3ENO_A 3EN9_B 2VWB_B 3ENH_B 2IVO_D 2IVP_A ....
Probab=26.82 E-value=40 Score=31.43 Aligned_cols=29 Identities=17% Similarity=0.197 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEec
Q 018518 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGS 86 (354)
Q Consensus 58 ~~La~~Aa~~aL~~ag~~~~dId~li~~t 86 (354)
++......+++|++++++++|||.|.++.
T Consensus 30 ~~~L~~~i~~~l~~~~~~~~did~iavt~ 58 (268)
T PF00814_consen 30 SENLPPLIEELLKEAGISLSDIDAIAVTR 58 (268)
T ss_dssp HHHHHHHHHHHHHHHTS-GGGESEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEec
Confidence 35566889999999999999999998754
No 266
>PRK07027 cobalamin biosynthesis protein CbiG; Provisional
Probab=26.49 E-value=55 Score=26.86 Aligned_cols=57 Identities=7% Similarity=-0.007 Sum_probs=38.5
Q ss_pred eeccccEEEeecCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcC
Q 018518 40 TVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK 106 (354)
Q Consensus 40 ~~gig~r~~~~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl 106 (354)
..|||.|+ +. ..+...++.+++|++.++.+.+|+.|.....-.+ .|++ ..+++.||.
T Consensus 5 ~vGIGcr~------~~-~~e~i~~ai~~~L~~~~l~~~si~~lasi~~K~~--E~~L-~~~A~~lg~ 61 (126)
T PRK07027 5 ALGIGCRR------GV-PAEQIEAAIRAALAQRPLASADVRVVATLDLKAD--EAGL-LALCARHGW 61 (126)
T ss_pred EEeeccCC------CC-CHHHHHHHHHHHHHHcCCCHHHhheeEehhhhcC--CHHH-HHHHHHhCC
Confidence 35888764 22 3355679999999999999999999865443222 3433 345677776
No 267
>TIGR03722 arch_KAE1 universal archaeal protein Kae1. This family represents the archaeal protein Kae1. Its partner Bud32 is fused with it in about half of the known archaeal genomes. The pair, which appears universal in the archaea, corresponds to EKC/KEOPS complex in eukaryotes. A recent characterization of the member from Pyrococcus abyssi, as an iron-binding, atypical DNA-binding protein with an apurinic lyase activity, challenges the common annotation of close homologs as O-sialoglycoprotein endopeptidase. The latter annotation is based on a characterized protein from the bacterium Pasteurella haemolytica.
Probab=26.30 E-value=70 Score=30.62 Aligned_cols=26 Identities=12% Similarity=0.213 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEec
Q 018518 61 SLTVVTSLLEKYKIDPTQIGRLEVGS 86 (354)
Q Consensus 61 a~~Aa~~aL~~ag~~~~dId~li~~t 86 (354)
-....+++|+++|++++|||.|.+..
T Consensus 49 l~~~i~~~l~~~~~~~~did~Iavt~ 74 (322)
T TIGR03722 49 APKLIKEALEEAGVSLEDIDAVAFSQ 74 (322)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEec
Confidence 44559999999999999999998854
No 268
>PRK08304 stage V sporulation protein AD; Validated
Probab=26.24 E-value=3.5e+02 Score=26.28 Aligned_cols=87 Identities=14% Similarity=0.071 Sum_probs=47.1
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcC--cCC---CCeeEEe-----ecC-----cChhHHH
Q 018518 62 LTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK--YGN---TDIEGVD-----STN-----ACYGGTA 126 (354)
Q Consensus 62 ~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl--~g~---~~~~~~d-----i~~-----~C~g~~~ 126 (354)
+....+=|++.|.+|+|-|+|+.+--. ... ..+...+..+-|. ..+ ..+..|| +.. ||+.-+.
T Consensus 211 ~dti~~h~~d~~~~~~~yDli~tGDlg-~vG-~~i~~~ll~~~g~~~~~~~~DcG~~iy~~~~q~~~aGgSGc~csa~v~ 288 (337)
T PRK08304 211 ADTIQQHFKDTGRSPEDYDLIVTGDLG-RVG-REILKELLKEEGYDIGDNYNDCGLMIYDSEQQDVFAGGSGCACSAVVT 288 (337)
T ss_pred HHHHHHHHHHcCCChhhccEEEEcchH-HHH-HHHHHHHHHHhCCChhhcccccCeEEeccCCCcccCCCcccchhHHHH
Confidence 333455567889999999999864221 111 1222223322233 100 1345666 321 5555443
Q ss_pred HHHHHHHHHHhCCCCCCEEEEEEeecc
Q 018518 127 ALFNCVNWVESASWDGRYGLVVCTDSA 153 (354)
Q Consensus 127 aL~~A~~~l~sg~~~~~~vLVV~~e~~ 153 (354)
.=. -...|+.|.+ |++|+|+.-..
T Consensus 289 ~~~-~~~~~~~g~~--~rvl~v~tGaL 312 (337)
T PRK08304 289 YGY-LLKELQKGKL--KRVLVVATGAL 312 (337)
T ss_pred HHH-HHHHHhcCCc--eEEEEEEchhh
Confidence 333 3445677877 99999987654
No 269
>PLN03170 chalcone synthase; Provisional
Probab=26.11 E-value=2.4e+02 Score=27.94 Aligned_cols=66 Identities=6% Similarity=-0.182 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCee-----EEe-ecC-cChhHHHHHHHHH
Q 018518 60 MSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIE-----GVD-STN-ACYGGTAALFNCV 132 (354)
Q Consensus 60 La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~-----~~d-i~~-~C~g~~~aL~~A~ 132 (354)
.....++++|+++|+.++|||..++.-. -+.+-..+.+.||+ +++-. .++ .+| +.++-..+|....
T Consensus 282 ~i~~~v~~~L~~~gl~~~di~~~v~Hqg-----g~~il~~v~~~Lgl--~~~~~~~s~~~l~~~GNtsSasv~~vL~~~~ 354 (401)
T PLN03170 282 NIERSLEEAFKPLGITDYNSIFWVAHPG-----GPAILDQVEAKVGL--EKERMRATRHVLSEYGNMSSACVLFILDEMR 354 (401)
T ss_pred HHHHHHHHHHHhcCCCccccCeEEecCC-----cHHHHHHHHHHcCC--ChHHHHHHHHHHHHhCccHHhHHHHHHHHHH
Confidence 3445677888889999999999765322 24455678899999 33321 122 233 4555555665543
No 270
>PRK00290 dnaK molecular chaperone DnaK; Provisional
Probab=25.87 E-value=1.5e+02 Score=31.32 Aligned_cols=46 Identities=9% Similarity=0.221 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcC
Q 018518 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK 106 (354)
Q Consensus 59 ~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl 106 (354)
+=..+.++++|+++++.+.+||.|+++-.+. .+|.+...|.+.+|.
T Consensus 307 ~~~~~~i~~~l~~a~~~~~~id~ViLvGGss--riP~v~~~l~~~fg~ 352 (627)
T PRK00290 307 ERTIEPCKQALKDAGLSVSDIDEVILVGGST--RMPAVQELVKEFFGK 352 (627)
T ss_pred HHHHHHHHHHHHHcCCChhhCcEEEEECCcC--CChHHHHHHHHHhCC
Confidence 3355667899999999999999999765443 479999999999885
No 271
>TIGR03723 bact_gcp putative glycoprotease GCP. This model represents bacterial members of a protein family that is widely distributed. In a few pathogenic species, the protein is exported in a way that may represent an exceptional secondary function. This model plus companion (archaeal) model TIGR03722 together span the prokaryotic member sequences of TIGR00329, a protein family that appears universal in life, and whose broad function is unknown. A member of TIGR03722 has been characterized as a DNA-binding protein with apurinic endopeptidase activity. In contrast, the rare characterized members of the present family show O-sialoglycoprotein endopeptidase (EC. 3.4.24.57) activity after export. These include glycoprotease (gcp) from Pasteurella haemolytica A1 and a cohemolysin from Riemerella anatipestifer (GB|AAG39646.1). The member from Staphylococcus aureus is essential and is related to cell wall dynamics and the modulation of autolysis, but members are also found in the Mycoplasmas
Probab=25.86 E-value=89 Score=29.86 Aligned_cols=59 Identities=5% Similarity=0.013 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCH--HHHHHHHhcCcCCCCeeEEeecC
Q 018518 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSI--KTFLMQIFEKYGNTDIEGVDSTN 119 (354)
Q Consensus 57 ~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~--a~~l~~~Lgl~g~~~~~~~di~~ 119 (354)
-.+......+++|++++++++|||.|.++.. |- ..+++ +...++.|.. .-+++.+-+++
T Consensus 49 H~~~l~~~i~~~l~~~~~~~~~id~iav~~G-PG-sftglrig~~~Ak~la~--~~~~p~~~v~h 109 (314)
T TIGR03723 49 HLEAIPPLIEEALAEAGLTLSDIDAIAVTAG-PG-LIGALLVGVSFAKALAL--ALNKPLIGVNH 109 (314)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecC-CC-hHHhHHHHHHHHHHHHH--HhCCCEEeccc
Confidence 3456678889999999999999999988543 33 23443 3334444443 12345555544
No 272
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=25.53 E-value=1.5e+02 Score=27.02 Aligned_cols=32 Identities=16% Similarity=0.052 Sum_probs=21.3
Q ss_pred CCCCccCcceeecc----ccchHHHHHHHHHhcchh
Q 018518 238 RQFSMLDVDYFVFH----SPYNKLVQKSFARLFFND 269 (354)
Q Consensus 238 ~g~~~~did~~v~H----q~n~~i~~~~~~~l~~~~ 269 (354)
.|++++||+|+|+= ...+.+=-.+.++|||+.
T Consensus 115 ~g~~~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~ 150 (226)
T PF00195_consen 115 AGLDPSDITHLVTVSCTGIAAPGLDARLINRLGLRP 150 (226)
T ss_dssp HTS-GGGECEEEEEESSSSECS-HHHHHHHHHT--T
T ss_pred cCCCCcccceEEEEecCCcCCCchhHHHHhcCCCCC
Confidence 37999999999963 344666667889999863
No 273
>cd01453 vWA_transcription_factor_IIH_type Transcription factors IIH type: TFIIH is a multiprotein complex that is one of the five general transcription factors that binds RNA polymerase II holoenzyme. Orthologues of these genes are found in all completed eukaryotic genomes and all these proteins contain a VWA domain. The p44 subunit of TFIIH functions as a DNA helicase in RNA polymerase II transcription initiation and DNA repair, and its transcriptional activity is dependent on its C-terminal Zn-binding domains. The function of the vWA domain is unclear, but may be involved in complex assembly. The MIDAS motif is not conserved in this sub-group.
Probab=24.84 E-value=3.3e+02 Score=23.48 Aligned_cols=89 Identities=9% Similarity=0.117 Sum_probs=49.2
Q ss_pred CHHHHHHHHHHHHHHHc--CCCcCCcCEEEEecccCCCCCCCHHH--HHHHHhcCcCCCCeeEEeecCcChhHHHHHHHH
Q 018518 56 DVISMSLTVVTSLLEKY--KIDPTQIGRLEVGSETVIDKSKSIKT--FLMQIFEKYGNTDIEGVDSTNACYGGTAALFNC 131 (354)
Q Consensus 56 ~~~~La~~Aa~~aL~~a--g~~~~dId~li~~t~t~~~~~P~~a~--~l~~~Lgl~g~~~~~~~di~~~C~g~~~aL~~A 131 (354)
+-.+-+..++++.+++. .-.-+.|+++++....+....|-+.. .+...|.- . +. ..|=...-.||..|
T Consensus 24 tRl~~ak~~~~~fi~~~~~~~~~~~vglv~f~~~~a~~~~PlT~D~~~~~~~L~~-----~--~~-~~G~t~l~~aL~~A 95 (183)
T cd01453 24 SRLAVVLKLLELFIEEFFDQNPISQLGIISIKNGRAEKLTDLTGNPRKHIQALKT-----A--RE-CSGEPSLQNGLEMA 95 (183)
T ss_pred hHHHHHHHHHHHHHHHHhhcCccccEEEEEEcCCccEEEECCCCCHHHHHHHhhc-----c--cC-CCCchhHHHHHHHH
Confidence 34566667777666542 12234699999843333333443322 23334431 1 21 23446889999999
Q ss_pred HHHHHhCC-CCCCEEEEEEeec
Q 018518 132 VNWVESAS-WDGRYGLVVCTDS 152 (354)
Q Consensus 132 ~~~l~sg~-~~~~~vLVV~~e~ 152 (354)
...++... ...+++||+.+|.
T Consensus 96 ~~~l~~~~~~~~~~iiil~sd~ 117 (183)
T cd01453 96 LESLKHMPSHGSREVLIIFSSL 117 (183)
T ss_pred HHHHhcCCccCceEEEEEEcCC
Confidence 99997521 1135677776653
No 274
>TIGR02350 prok_dnaK chaperone protein DnaK. Members of this family are the chaperone DnaK, of the DnaK-DnaJ-GrpE chaperone system. All members of the seed alignment were taken from completely sequenced bacterial or archaeal genomes and (except for Mycoplasma sequence) found clustered with other genes of this systems. This model excludes DnaK homologs that are not DnaK itself, such as the heat shock cognate protein HscA (TIGR01991). However, it is not designed to distinguish among DnaK paralogs in eukaryotes. Note that a number of dnaK genes have shadow ORFs in the same reverse (relative to dnaK) reading frame, a few of which have been assigned glutamate dehydrogenase activity. The significance of this observation is unclear; lengths of such shadow ORFs are highly variable as if the presumptive protein product is not conserved.
Probab=24.50 E-value=1.4e+02 Score=31.05 Aligned_cols=46 Identities=11% Similarity=0.215 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcC
Q 018518 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK 106 (354)
Q Consensus 59 ~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl 106 (354)
+=..+.++++|+++++.+++||.|+++-.+. .+|.+-..|.+.+|.
T Consensus 305 ~~~~~~i~~~l~~a~~~~~~i~~V~LvGGss--riP~v~~~i~~~f~~ 350 (595)
T TIGR02350 305 ERTKEPVRQALKDAGLSASDIDEVILVGGST--RIPAVQELVKDFFGK 350 (595)
T ss_pred HHHHHHHHHHHHHcCCCHhHCcEEEEECCcc--cChHHHHHHHHHhCC
Confidence 3345667889999999999999999765443 479999999999885
No 275
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional
Probab=24.40 E-value=1.1e+02 Score=29.91 Aligned_cols=57 Identities=16% Similarity=0.105 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCH--HHHHHHHhcCcCCCCeeEEeecC
Q 018518 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSI--KTFLMQIFEKYGNTDIEGVDSTN 119 (354)
Q Consensus 59 ~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~--a~~l~~~Lgl~g~~~~~~~di~~ 119 (354)
+--....+++|+++|++++|||.|.+.. .|- ..+++ ....++.|.. .-+++.+-+++
T Consensus 51 ~~l~~~i~~~l~~a~~~~~did~Iavt~-GPG-l~~~LrVG~~~Ak~LA~--a~~~PligV~H 109 (345)
T PTZ00340 51 EHILSLVKEALEEAKITPSDISLICYTK-GPG-MGAPLSVGAVVARTLSL--LWGKPLVGVNH 109 (345)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEec-CCC-cHhhHHHHHHHHHHHHH--HcCCCEeecch
Confidence 3445678899999999999999998743 333 33443 2333444443 23445555554
No 276
>PLN03173 chalcone synthase; Provisional
Probab=24.37 E-value=2.5e+02 Score=27.70 Aligned_cols=42 Identities=7% Similarity=-0.142 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcC
Q 018518 60 MSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK 106 (354)
Q Consensus 60 La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl 106 (354)
.....++++|++.|+.++|||.+++.- .-+.+-..+++.||+
T Consensus 278 ~~~~~i~~~L~~~gl~~~di~~~v~Hq-----gg~~Il~~v~~~LgL 319 (391)
T PLN03173 278 NVEKSLTEAFKPLGISDWNSLFWIAHP-----GGPAILDQVEAKLAL 319 (391)
T ss_pred HHHHHHHHHHHhcCCCccccCeEEECC-----CcHHHHHHHHHHcCC
Confidence 344567788889999999999976632 224555678999999
No 277
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=23.92 E-value=76 Score=29.65 Aligned_cols=40 Identities=13% Similarity=0.171 Sum_probs=29.9
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcC
Q 018518 62 LTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK 106 (354)
Q Consensus 62 ~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl 106 (354)
+-|.+.+|.++|+..+|||++-+..... +..-.+++.|++
T Consensus 296 vPAI~~vLKksGlkl~DiDl~EvNEAFA-----pQ~LAv~r~L~l 335 (396)
T KOG1391|consen 296 VPAISGVLKKSGLKLKDIDLVEVNEAFA-----PQYLAVERSLDL 335 (396)
T ss_pred cHHHHHHHHHcCCcccccceEEechhhc-----hHHHHHHHhhCC
Confidence 5789999999999999999998754321 223456778887
No 278
>CHL00094 dnaK heat shock protein 70
Probab=23.92 E-value=1.8e+02 Score=30.64 Aligned_cols=46 Identities=15% Similarity=0.260 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcC
Q 018518 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK 106 (354)
Q Consensus 59 ~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl 106 (354)
+-.....+++|+++++.+++||.|+++-.+. .+|.+...|.+.+|.
T Consensus 309 ~~~~~~i~~~L~~a~~~~~~i~~ViLvGGss--riP~v~~~l~~~fg~ 354 (621)
T CHL00094 309 NRCRIPVENALKDAKLDKSDIDEVVLVGGST--RIPAIQELVKKLLGK 354 (621)
T ss_pred HHHHHHHHHHHHHcCCChhhCcEEEEECCcc--CChHHHHHHHHHhCC
Confidence 3445567899999999999999999765443 479999999999985
No 279
>COG4401 AroH Chorismate mutase [Amino acid transport and metabolism]
Probab=23.48 E-value=1.6e+02 Score=23.79 Aligned_cols=60 Identities=13% Similarity=-0.033 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHH----HcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcCcCCCCeeEEeecCcCh
Q 018518 59 SMSLTVVTSLLE----KYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACY 122 (354)
Q Consensus 59 ~La~~Aa~~aL~----~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl~g~~~~~~~di~~~C~ 122 (354)
+=-..|.+++|+ +.-.+|+|+--+++ |.|+|...--.|..+..+-|. .+++.++++.-|.
T Consensus 18 eeI~~at~eLl~~i~~~N~~~pedv~sv~~-svT~Dl~A~FPAka~R~~~gw---~~Vpv~~~Qem~V 81 (125)
T COG4401 18 EEILDATKELLEEIEEENITDPEDVVSVIL-SVTEDLDAIFPAKAVRELPGW---EYVPVMCMQEMPV 81 (125)
T ss_pred HHHHHHHHHHHHHHHHhcCCChhheeeEEE-EeccchhhhCcHHHhccCCCC---cccceeeeeeccC
Confidence 334455555554 56789999887776 456664322224444444455 7788888877554
No 280
>PF12633 Adenyl_cycl_N: Adenylate cyclase NT domain; InterPro: IPR024685 Adenylate cyclase is the enzyme responsible for the synthesis of cAMP from ATP. On the basis of sequence similarity, it has been proposed that there are three different classes of adenylate cyclases [, ]. Class I cyclases are found in enterobacteria and related Gram-negative bacteria. This entry represents the N-terminal domain of class-I adenylate cyclases.
Probab=22.64 E-value=2.4e+02 Score=25.36 Aligned_cols=20 Identities=5% Similarity=-0.062 Sum_probs=14.4
Q ss_pred ccCccchhHHHhHHHhhhcc
Q 018518 327 QVGNMYTASLYAAFASLLHE 346 (354)
Q Consensus 327 ~~GN~~saSi~~~L~~~l~~ 346 (354)
.--|.|||==.+.|.+..+.
T Consensus 173 ~~E~~GSaQh~LLLdEFYRT 192 (204)
T PF12633_consen 173 TGESCGSAQHLLLLDEFYRT 192 (204)
T ss_pred CCCCChHHHHHHHHHHHHHH
Confidence 34478888888888877653
No 281
>PTZ00009 heat shock 70 kDa protein; Provisional
Probab=22.50 E-value=1.7e+02 Score=31.03 Aligned_cols=44 Identities=11% Similarity=0.290 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcC
Q 018518 61 SLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK 106 (354)
Q Consensus 61 a~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl 106 (354)
..+.++++|+++++++++||.|+++-.+. .+|.+-..|.+.+|-
T Consensus 315 ~~~~i~~~L~~a~~~~~~i~~ViLvGGss--riP~v~~~i~~~f~~ 358 (653)
T PTZ00009 315 TLQPVEKVLKDAGMDKRSVHEVVLVGGST--RIPKVQSLIKDFFNG 358 (653)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEEECCCC--CChhHHHHHHHHhCC
Confidence 34568899999999999999999755433 479999999998863
No 282
>cd01458 vWA_ku Ku70/Ku80 N-terminal domain. The Ku78 heterodimer (composed of Ku70 and Ku80) contributes to genomic integrity through its ability to bind DNA double-strand breaks (DSB) in a preferred orientation. DSB's are repaired by either homologues recombination or non-homologues end joining and facilitate repair by the non-homologous end-joining pathway (NHEJ). The Ku heterodimer is required for accurate process that tends to preserve the sequence at the junction. Ku78 is found in all three kingdoms of life. However, only the eukaryotic proteins have a vWA domain fused to them at their N-termini. The vWA domain is not involved in DNA binding but may very likey mediate Ku78's interactions with other proteins. Members of this subgroup lack the conserved MIDAS motif.
Probab=22.44 E-value=5.4e+02 Score=22.66 Aligned_cols=82 Identities=12% Similarity=0.127 Sum_probs=49.7
Q ss_pred CCHHHHHHHHHHHHHHHc--CCCcCCcCEEEEecccCCC------------CCCCHHHHHHHHhcCcCCCCeeEEee---
Q 018518 55 EDVISMSLTVVTSLLEKY--KIDPTQIGRLEVGSETVID------------KSKSIKTFLMQIFEKYGNTDIEGVDS--- 117 (354)
Q Consensus 55 e~~~~La~~Aa~~aL~~a--g~~~~dId~li~~t~t~~~------------~~P~~a~~l~~~Lgl~g~~~~~~~di--- 117 (354)
.+..+.+.+++.+++.+- .-+-+.|++++++|..... ..+.....+...+.+. .++...+..
T Consensus 23 ~s~l~~a~~~i~~~~~~ki~~~~~D~vGlilf~t~~~~~~~~~~~i~v~~~l~~~~~~~l~~l~~~~-~~~~~~~~~~~~ 101 (218)
T cd01458 23 ESPFEEALKCIRQLMKSKIISSPKDLVGVVFYGTEESKNPVGYENIYVLLDLDTPGAERVEDLKELI-EPGGLSFAGQVG 101 (218)
T ss_pred CChHHHHHHHHHHHHHhceeCCCCCeEEEEEEcccCCCCcCCCCceEEeecCCCCCHHHHHHHHHHh-hcchhhhcccCC
Confidence 477899999999999863 2344679999998864111 1122334444444431 111111111
Q ss_pred cCcChhHHHHHHHHHHHHHh
Q 018518 118 TNACYGGTAALFNCVNWVES 137 (354)
Q Consensus 118 ~~~C~g~~~aL~~A~~~l~s 137 (354)
......+..||.+|..++..
T Consensus 102 ~~~~~~l~~aL~~a~~~~~~ 121 (218)
T cd01458 102 DSGQVSLSDALWVCLDLFSK 121 (218)
T ss_pred CCCCccHHHHHHHHHHHHHh
Confidence 23456789999999999986
No 283
>PRK13411 molecular chaperone DnaK; Provisional
Probab=22.14 E-value=1.6e+02 Score=31.32 Aligned_cols=45 Identities=11% Similarity=0.275 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCCCHHHHHHHHhcC
Q 018518 60 MSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK 106 (354)
Q Consensus 60 La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~l~~~Lgl 106 (354)
=..+.++++|+++++.+++||.|+++-.+. .+|.+-..|...+|-
T Consensus 309 ~~~~~i~~~L~~a~~~~~~id~ViLvGGss--riP~v~~~l~~~f~~ 353 (653)
T PRK13411 309 ATIEPMQQALKDAGLKPEDIDRVILVGGST--RIPAVQEAIQKFFGG 353 (653)
T ss_pred HHHHHHHHHHHHcCCCHHHCcEEEEECCCC--CcchHHHHHHHHcCC
Confidence 355678899999999999999999765443 479999999998873
No 284
>PRK12404 stage V sporulation protein AD; Provisional
Probab=21.10 E-value=2.4e+02 Score=27.39 Aligned_cols=26 Identities=12% Similarity=0.236 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHhhhcCCCCccCcceeecccc
Q 018518 222 DSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSP 253 (354)
Q Consensus 222 ~~~~~~~l~~~~~~~~~g~~~~did~~v~Hq~ 253 (354)
.++++..+++ +|++++|||+++....
T Consensus 59 ~EA~~~AL~k------AGI~~~DID~i~vGdL 84 (334)
T PRK12404 59 EEACSRAIEK------AKLRKEDIQFFLAGDL 84 (334)
T ss_pred HHHHHHHHHH------cCCCHHHCCEEEEEec
Confidence 3444444444 4799999999998543
No 285
>PF03702 UPF0075: Uncharacterised protein family (UPF0075); InterPro: IPR005338 Anhydro-N-acetylmuramic acid kinase catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. It is also required for the utilisation of anhMurNAc, either imported from the medium, or derived from its own cell wall murein, and in so doing plays a role in cell wall recycling [, ]. ; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0006040 amino sugar metabolic process, 0009254 peptidoglycan turnover; PDB: 3QBX_B 3QBW_A 3CQY_B.
Probab=21.05 E-value=1.1e+02 Score=29.98 Aligned_cols=49 Identities=16% Similarity=0.179 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEecccCCCCCC----------CHHHHHHHHhcC
Q 018518 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSK----------SIKTFLMQIFEK 106 (354)
Q Consensus 57 ~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P----------~~a~~l~~~Lgl 106 (354)
...+-.+|+++.|+++++++++||+|=...+|-.+ .| +-.+.|+++.|+
T Consensus 66 lg~~~a~av~~~l~~~~i~~~~I~~IgsHGQTv~H-~P~~~~~~TlQiG~~~~iA~~tgi 124 (364)
T PF03702_consen 66 LGELFADAVNQFLKKNGISPSDIDLIGSHGQTVFH-RPEGQHPFTLQIGDPAVIAERTGI 124 (364)
T ss_dssp HHHHHHHHHHHHHHHCT--GGGEEEEEE--EEEEE-ECCCTTTEEEEES-HHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHHcCCCcccccEEEeCCcceec-CcCCCCCceEecCCHHHHHHHHCc
Confidence 34667899999999999999999999876666432 23 347889999998
No 286
>PF05872 DUF853: Bacterial protein of unknown function (DUF853); InterPro: IPR008571 Members of this family have a P-loop containing nucleotide triphosphate hydrolases fold. This family is restricted to bacterial proteins, none of which have currently been characterised.
Probab=20.47 E-value=53 Score=33.25 Aligned_cols=21 Identities=33% Similarity=0.351 Sum_probs=18.2
Q ss_pred ccccCccchhHHHhHHHhhhc
Q 018518 325 PKQVGNMYTASLYAAFASLLH 345 (354)
Q Consensus 325 ~~~~GN~~saSi~~~L~~~l~ 345 (354)
..+|||+|++||-..+..++.
T Consensus 165 ~~~yG~is~aS~gaI~R~ll~ 185 (502)
T PF05872_consen 165 SAEYGNISSASIGAIQRALLV 185 (502)
T ss_pred HHHcCCccHHHHHHHHHHHHH
Confidence 479999999999999888763
No 287
>PRK12342 hypothetical protein; Provisional
Probab=20.35 E-value=3.1e+02 Score=25.47 Aligned_cols=28 Identities=11% Similarity=0.081 Sum_probs=25.2
Q ss_pred cCEEEEecccCCCCCCCHHHHHHHHhcC
Q 018518 79 IGRLEVGSETVIDKSKSIKTFLMQIFEK 106 (354)
Q Consensus 79 Id~li~~t~t~~~~~P~~a~~l~~~Lgl 106 (354)
.|+|+++..+.|...-.+...++..||+
T Consensus 110 ~DLVl~G~~s~D~~tgqvg~~lA~~Lg~ 137 (254)
T PRK12342 110 FDLLLFGEGSGDLYAQQVGLLLGELLQL 137 (254)
T ss_pred CCEEEEcCCcccCCCCCHHHHHHHHhCC
Confidence 8999999999887777888999999998
No 288
>TIGR03285 methan_mark_14 putative methanogenesis marker protein 14. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=20.06 E-value=1e+02 Score=30.15 Aligned_cols=34 Identities=15% Similarity=0.148 Sum_probs=29.8
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEec
Q 018518 53 EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGS 86 (354)
Q Consensus 53 ~~e~~~~La~~Aa~~aL~~ag~~~~dId~li~~t 86 (354)
..|+..+|-.....+++++++++.+|+|.++=.|
T Consensus 61 tresV~elV~dtl~e~~k~A~l~i~DL~FVVRST 94 (445)
T TIGR03285 61 TRESVAELVKDTLKESLKKAGLDIDDLDFVVRST 94 (445)
T ss_pred cHHHHHHHHHHHHHHHHHHcCCChhhccEEEecc
Confidence 3567889999999999999999999999998654
Done!