Query 018519
Match_columns 354
No_of_seqs 265 out of 1745
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 16:32:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018519.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018519hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sgz_A Hydroxyacid oxidase 2; 100.0 6.7E-77 2.3E-81 573.2 33.4 337 4-341 2-349 (352)
2 2nzl_A Hydroxyacid oxidase 1; 100.0 3.3E-70 1.1E-74 537.0 35.5 339 3-342 26-385 (392)
3 2nli_A Lactate oxidase; flavoe 100.0 1.3E-69 4.3E-74 529.3 35.8 339 2-343 11-363 (368)
4 1gox_A (S)-2-hydroxy-acid oxid 100.0 6.7E-68 2.3E-72 518.2 38.5 351 3-354 3-370 (370)
5 1kbi_A Cytochrome B2, L-LCR; f 100.0 6.6E-66 2.3E-70 521.7 37.3 341 3-345 121-484 (511)
6 1p4c_A L(+)-mandelate dehydrog 100.0 1.1E-64 3.9E-69 496.7 36.2 338 3-344 4-358 (380)
7 3sr7_A Isopentenyl-diphosphate 100.0 8.6E-42 3E-46 331.3 25.5 276 41-343 54-357 (365)
8 1vcf_A Isopentenyl-diphosphate 100.0 8.2E-41 2.8E-45 322.3 20.6 283 23-339 8-330 (332)
9 1p0k_A Isopentenyl-diphosphate 100.0 3.3E-38 1.1E-42 306.1 27.3 277 39-342 21-329 (349)
10 2qr6_A IMP dehydrogenase/GMP r 100.0 9.8E-41 3.4E-45 328.7 5.5 311 15-341 13-392 (393)
11 3vkj_A Isopentenyl-diphosphate 100.0 4E-38 1.4E-42 306.5 22.9 277 41-343 27-345 (368)
12 1ypf_A GMP reductase; GUAC, pu 100.0 3.6E-35 1.2E-39 283.3 23.9 267 34-343 7-326 (336)
13 2c6q_A GMP reductase 2; TIM ba 100.0 9.6E-34 3.3E-38 274.5 17.0 263 35-339 14-342 (351)
14 3r2g_A Inosine 5'-monophosphat 100.0 2.1E-32 7.3E-37 264.4 20.7 255 41-337 8-317 (361)
15 1eep_A Inosine 5'-monophosphat 100.0 2.8E-29 9.5E-34 247.9 21.3 258 41-341 10-385 (404)
16 3khj_A Inosine-5-monophosphate 99.9 1.4E-23 4.8E-28 203.7 22.5 251 41-337 13-331 (361)
17 1ea0_A Glutamate synthase [NAD 99.9 1.1E-23 3.8E-28 229.8 19.5 285 39-340 821-1168(1479)
18 4fo4_A Inosine 5'-monophosphat 99.9 4.3E-23 1.5E-27 200.3 20.3 257 41-337 14-335 (366)
19 3ffs_A Inosine-5-monophosphate 99.9 1.9E-22 6.7E-27 197.4 23.1 255 41-337 10-370 (400)
20 1ofd_A Ferredoxin-dependent gl 99.9 4.1E-22 1.4E-26 217.9 23.8 281 41-341 840-1204(1520)
21 2e6f_A Dihydroorotate dehydrog 99.9 5.8E-22 2E-26 189.0 19.9 242 59-338 2-310 (314)
22 1vhn_A Putative flavin oxidore 99.9 4.4E-23 1.5E-27 197.4 11.4 242 69-341 2-274 (318)
23 1jub_A Dihydroorotate dehydrog 99.9 3E-21 1E-25 183.8 22.6 240 61-338 2-308 (311)
24 1gte_A Dihydropyrimidine dehyd 99.9 3.6E-21 1.2E-25 209.8 25.6 250 54-336 526-851 (1025)
25 4af0_A Inosine-5'-monophosphat 99.9 1.8E-20 6.2E-25 186.7 21.8 123 215-337 328-523 (556)
26 4ef8_A Dihydroorotate dehydrog 99.9 1.3E-20 4.6E-25 182.0 20.4 253 49-339 25-344 (354)
27 1ep3_A Dihydroorotate dehydrog 99.9 2.3E-20 7.9E-25 177.2 19.5 243 56-338 2-306 (311)
28 3usb_A Inosine-5'-monophosphat 99.9 4.1E-20 1.4E-24 187.2 22.1 127 211-337 299-481 (511)
29 1me8_A Inosine-5'-monophosphat 99.9 3.8E-20 1.3E-24 187.3 21.5 126 211-336 286-471 (503)
30 4avf_A Inosine-5'-monophosphat 99.8 2E-19 6.9E-24 181.3 24.9 123 215-337 276-459 (490)
31 3oix_A Putative dihydroorotate 99.8 1.4E-19 4.6E-24 174.5 22.4 243 58-337 35-340 (345)
32 3i65_A Dihydroorotate dehydrog 99.8 2.9E-19 9.9E-24 175.2 22.4 111 220-338 286-411 (415)
33 3zwt_A Dihydroorotate dehydrog 99.8 9.8E-19 3.4E-23 170.0 25.8 252 48-338 38-364 (367)
34 4fxs_A Inosine-5'-monophosphat 99.8 3.1E-19 1.1E-23 180.1 21.5 122 215-336 278-457 (496)
35 3b0p_A TRNA-dihydrouridine syn 99.8 1.3E-18 4.4E-23 168.4 23.3 244 70-341 2-282 (350)
36 1tv5_A Dhodehase, dihydroorota 99.8 1.5E-18 5E-23 172.1 23.2 109 222-338 316-439 (443)
37 1f76_A Dihydroorotate dehydrog 99.8 2.7E-18 9.1E-23 165.2 22.7 209 58-298 42-323 (336)
38 1vrd_A Inosine-5'-monophosphat 99.8 4.5E-18 1.5E-22 171.7 23.8 126 212-337 281-462 (494)
39 1zfj_A Inosine monophosphate d 99.8 1E-17 3.6E-22 168.9 21.6 124 215-338 280-462 (491)
40 1jcn_A Inosine monophosphate d 99.8 3.3E-17 1.1E-21 166.3 23.7 121 215-337 302-482 (514)
41 3bo9_A Putative nitroalkan dio 99.8 2.3E-17 8E-22 158.1 20.4 188 68-307 23-219 (326)
42 3tjx_A Dihydroorotate dehydrog 99.8 2.3E-17 7.7E-22 159.9 19.9 247 55-339 31-344 (354)
43 2gjl_A Hypothetical protein PA 99.8 7E-17 2.4E-21 154.8 21.5 195 64-308 10-216 (328)
44 2cu0_A Inosine-5'-monophosphat 99.7 4.3E-17 1.5E-21 164.3 17.3 118 217-337 276-453 (486)
45 2z6i_A Trans-2-enoyl-ACP reduc 99.7 2E-16 7E-21 151.9 20.4 182 65-300 8-198 (332)
46 3bw2_A 2-nitropropane dioxygen 99.7 5.9E-16 2E-20 150.7 20.4 183 71-300 10-244 (369)
47 2uva_G Fatty acid synthase bet 99.5 7.7E-14 2.6E-18 159.2 12.2 206 48-302 558-804 (2060)
48 1z41_A YQJM, probable NADH-dep 99.5 1.1E-11 3.8E-16 119.1 23.6 216 62-298 8-312 (338)
49 1vyr_A Pentaerythritol tetrani 99.4 2.9E-11 9.8E-16 117.4 22.0 215 62-298 8-328 (364)
50 2r14_A Morphinone reductase; H 99.4 2.4E-11 8.2E-16 118.4 19.5 214 62-298 14-333 (377)
51 2gou_A Oxidoreductase, FMN-bin 99.4 2.1E-11 7.3E-16 118.3 19.0 214 62-298 8-327 (365)
52 2hsa_B 12-oxophytodienoate red 99.3 5.9E-10 2E-14 109.4 23.2 76 220-298 263-353 (402)
53 3gr7_A NADPH dehydrogenase; fl 99.3 5.7E-10 1.9E-14 107.3 22.2 78 219-298 231-312 (340)
54 3q58_A N-acetylmannosamine-6-p 99.3 9.6E-11 3.3E-15 106.6 14.8 167 90-298 38-215 (229)
55 3igs_A N-acetylmannosamine-6-p 99.2 3E-10 1E-14 103.6 17.6 167 90-298 38-215 (232)
56 1icp_A OPR1, 12-oxophytodienoa 99.2 3.2E-10 1.1E-14 110.5 18.9 76 220-298 259-335 (376)
57 2uv8_G Fatty acid synthase sub 99.2 5.1E-11 1.7E-15 135.6 12.7 207 48-300 565-809 (2051)
58 3l5a_A NADH/flavin oxidoreduct 99.2 9.2E-10 3.1E-14 108.6 19.5 78 220-298 267-351 (419)
59 3hgj_A Chromate reductase; TIM 99.2 3.8E-09 1.3E-13 101.8 23.2 75 222-298 244-323 (349)
60 1ps9_A 2,4-dienoyl-COA reducta 99.1 1.7E-09 5.7E-14 112.8 20.1 222 62-298 8-315 (671)
61 1y0e_A Putative N-acetylmannos 99.1 1.6E-09 5.3E-14 97.6 16.7 173 90-297 25-208 (223)
62 3k30_A Histamine dehydrogenase 99.1 2.4E-09 8.4E-14 111.9 18.3 221 62-298 17-329 (690)
63 1o94_A Tmadh, trimethylamine d 99.1 3.7E-09 1.3E-13 111.3 19.0 74 222-298 243-326 (729)
64 3kru_A NADH:flavin oxidoreduct 99.1 1.4E-08 4.7E-13 97.7 21.1 75 220-298 233-312 (343)
65 1wv2_A Thiazole moeity, thiazo 99.1 4.2E-09 1.4E-13 96.2 16.4 199 62-298 10-221 (265)
66 3l5l_A Xenobiotic reductase A; 99.0 1.8E-08 6.1E-13 97.7 20.6 76 221-298 250-330 (363)
67 3gka_A N-ethylmaleimide reduct 99.0 1.7E-08 5.8E-13 97.6 20.1 68 220-298 253-321 (361)
68 1xm3_A Thiazole biosynthesis p 99.0 4.2E-08 1.4E-12 90.9 21.8 198 62-298 3-212 (264)
69 4ab4_A Xenobiotic reductase B; 99.0 1.8E-08 6.1E-13 97.5 19.8 68 220-298 245-313 (362)
70 3zen_D Fatty acid synthase; tr 98.9 2.9E-09 9.8E-14 125.3 12.0 208 47-301 402-654 (3089)
71 1yxy_A Putative N-acetylmannos 98.9 6.8E-08 2.3E-12 87.5 18.1 172 90-297 38-219 (234)
72 3aty_A Tcoye, prostaglandin F2 98.9 2.2E-07 7.5E-12 90.5 20.8 72 220-298 269-341 (379)
73 1mzh_A Deoxyribose-phosphate a 98.8 3.6E-08 1.2E-12 89.3 13.4 71 221-295 136-206 (225)
74 3o07_A Pyridoxine biosynthesis 98.8 2E-08 6.8E-13 92.4 11.0 80 216-297 121-233 (291)
75 3qja_A IGPS, indole-3-glycerol 98.7 1.2E-07 4.2E-12 88.1 12.3 166 91-298 75-247 (272)
76 1wa3_A 2-keto-3-deoxy-6-phosph 98.7 3E-07 1E-11 81.4 14.3 152 125-298 12-183 (205)
77 4adt_A Pyridoxine biosynthetic 98.6 3.2E-08 1.1E-12 93.1 6.8 101 216-324 131-263 (297)
78 2qjg_A Putative aldolase MJ040 98.6 1.3E-07 4.4E-12 87.6 10.7 185 68-298 30-242 (273)
79 1yad_A Regulatory protein TENI 98.6 1.1E-06 3.8E-11 78.8 15.0 80 216-298 116-197 (221)
80 1ka9_F Imidazole glycerol phos 98.6 1.9E-07 6.4E-12 85.3 10.0 79 217-298 152-230 (252)
81 3tsm_A IGPS, indole-3-glycerol 98.6 1.3E-06 4.4E-11 81.1 15.2 166 91-298 82-254 (272)
82 3f4w_A Putative hexulose 6 pho 98.6 1.1E-06 3.9E-11 77.9 14.3 91 220-320 117-208 (211)
83 2zbt_A Pyridoxal biosynthesis 98.5 2.6E-08 8.8E-13 93.7 2.5 115 216-338 131-277 (297)
84 1jvn_A Glutamine, bifunctional 98.5 2.4E-07 8.2E-12 94.5 9.6 79 217-298 452-531 (555)
85 1qo2_A Molecule: N-((5-phospho 98.5 1.6E-07 5.4E-12 85.5 7.3 84 212-298 136-228 (241)
86 3nav_A Tryptophan synthase alp 98.5 7.5E-06 2.6E-10 76.0 18.5 152 115-302 89-246 (271)
87 3tjl_A NADPH dehydrogenase; OL 98.5 1.2E-06 4E-11 85.8 13.7 77 220-298 264-351 (407)
88 1thf_D HISF protein; thermophI 98.5 4.4E-07 1.5E-11 82.9 9.8 78 218-298 152-229 (253)
89 4a3u_A NCR, NADH\:flavin oxido 98.5 3.5E-06 1.2E-10 81.3 16.6 74 222-298 246-320 (358)
90 3vnd_A TSA, tryptophan synthas 98.5 9.9E-06 3.4E-10 75.0 18.7 168 115-320 87-264 (267)
91 1h5y_A HISF; histidine biosynt 98.5 8.9E-07 3E-11 80.2 11.2 78 218-298 155-232 (253)
92 2y88_A Phosphoribosyl isomeras 98.5 3.8E-07 1.3E-11 82.9 8.5 77 219-298 151-230 (244)
93 1geq_A Tryptophan synthase alp 98.5 1.6E-06 5.5E-11 79.0 12.7 98 219-319 144-245 (248)
94 2v82_A 2-dehydro-3-deoxy-6-pho 98.4 1.9E-06 6.4E-11 76.7 12.5 99 216-324 107-205 (212)
95 2nv1_A Pyridoxal biosynthesis 98.4 7.6E-08 2.6E-12 91.0 3.3 112 216-335 131-274 (305)
96 2w6r_A Imidazole glycerol phos 98.4 3.9E-07 1.3E-11 83.9 7.8 77 219-298 158-234 (266)
97 2htm_A Thiazole biosynthesis p 98.4 7.4E-07 2.5E-11 81.6 9.0 77 218-298 133-212 (268)
98 1vzw_A Phosphoribosyl isomeras 98.4 6.2E-07 2.1E-11 81.5 8.2 75 219-298 148-227 (244)
99 1qop_A Tryptophan synthase alp 98.3 3.2E-05 1.1E-09 71.5 18.0 82 218-301 158-242 (268)
100 3jr2_A Hexulose-6-phosphate sy 98.3 5.4E-06 1.8E-10 74.3 12.1 186 89-320 20-214 (218)
101 1i4n_A Indole-3-glycerol phosp 98.3 9.7E-06 3.3E-10 74.4 13.7 79 216-298 156-235 (251)
102 1pii_A N-(5'phosphoribosyl)ant 98.3 7E-06 2.4E-10 81.3 13.3 107 216-335 163-269 (452)
103 3tdn_A FLR symmetric alpha-bet 98.3 2.4E-06 8.2E-11 77.9 9.2 78 217-297 35-112 (247)
104 3ngj_A Deoxyribose-phosphate a 98.3 5.5E-06 1.9E-10 75.2 11.3 131 134-294 93-230 (239)
105 1xi3_A Thiamine phosphate pyro 98.3 4E-06 1.4E-10 74.3 10.1 78 217-298 115-195 (215)
106 3oa3_A Aldolase; structural ge 98.2 7.4E-06 2.5E-10 76.2 11.9 174 92-294 78-264 (288)
107 4e38_A Keto-hydroxyglutarate-a 98.2 1.9E-05 6.3E-10 71.6 14.2 160 126-297 36-206 (232)
108 3tdn_A FLR symmetric alpha-bet 98.2 1.4E-07 4.9E-12 86.1 0.0 79 217-298 156-234 (247)
109 2p10_A MLL9387 protein; putati 98.2 3.7E-05 1.2E-09 71.0 15.7 210 72-320 28-279 (286)
110 2agk_A 1-(5-phosphoribosyl)-5- 98.2 1.1E-06 3.8E-11 81.2 5.6 79 216-296 156-239 (260)
111 1rd5_A Tryptophan synthase alp 98.2 2.8E-05 9.5E-10 71.5 14.6 102 218-321 154-259 (262)
112 3o63_A Probable thiamine-phosp 98.2 5.6E-06 1.9E-10 75.7 9.3 81 217-298 142-224 (243)
113 4a29_A Engineered retro-aldol 98.2 3.3E-05 1.1E-09 70.5 13.8 80 216-298 159-238 (258)
114 2tps_A Protein (thiamin phosph 98.1 9.8E-06 3.4E-10 72.5 10.1 79 218-298 124-205 (227)
115 2ekc_A AQ_1548, tryptophan syn 98.1 0.00052 1.8E-08 63.1 21.4 81 218-301 158-242 (262)
116 2yw3_A 4-hydroxy-2-oxoglutarat 98.1 2.4E-05 8.1E-10 69.7 11.2 74 216-297 110-183 (207)
117 1w8s_A FBP aldolase, fructose- 97.9 0.00011 3.9E-09 67.7 13.6 66 223-298 165-236 (263)
118 1rpx_A Protein (ribulose-phosp 97.9 0.00017 5.7E-09 64.8 14.0 167 91-298 26-212 (230)
119 1ka9_F Imidazole glycerol phos 97.9 2.3E-05 7.7E-10 71.3 8.3 77 219-298 33-109 (252)
120 1thf_D HISF protein; thermophI 97.9 2.2E-05 7.6E-10 71.4 8.1 77 219-298 32-108 (253)
121 1vc4_A Indole-3-glycerol phosp 97.9 1.5E-05 5E-10 73.4 6.9 78 217-298 161-241 (254)
122 2yzr_A Pyridoxal biosynthesis 97.9 3.8E-05 1.3E-09 72.5 9.6 45 252-298 230-276 (330)
123 1ujp_A Tryptophan synthase alp 97.9 0.00019 6.5E-09 66.5 14.0 79 218-300 155-236 (271)
124 1ub3_A Aldolase protein; schif 97.9 8.9E-05 3.1E-09 66.6 11.3 170 92-293 23-205 (220)
125 3lab_A Putative KDPG (2-keto-3 97.9 0.00017 5.8E-09 64.5 12.9 118 126-292 15-138 (217)
126 1h5y_A HISF; histidine biosynt 97.9 4.2E-05 1.4E-09 69.0 9.0 77 218-297 34-110 (253)
127 2fli_A Ribulose-phosphate 3-ep 97.9 0.0001 3.6E-09 65.5 11.2 182 91-319 19-218 (220)
128 1h1y_A D-ribulose-5-phosphate 97.8 0.00047 1.6E-08 62.0 15.5 182 92-320 23-222 (228)
129 4gbu_A NADPH dehydrogenase 1; 97.8 0.00048 1.6E-08 67.3 16.2 40 257-298 313-353 (400)
130 1qo2_A Molecule: N-((5-phospho 97.8 2.3E-05 7.7E-10 71.1 5.8 77 218-298 31-107 (241)
131 3vk5_A MOEO5; TIM barrel, tran 97.8 6.4E-05 2.2E-09 69.6 8.5 71 221-297 190-260 (286)
132 3ajx_A 3-hexulose-6-phosphate 97.7 0.00066 2.3E-08 59.6 14.4 75 219-298 115-191 (207)
133 3glc_A Aldolase LSRF; TIM barr 97.7 0.0009 3.1E-08 62.7 15.9 64 222-298 194-262 (295)
134 2y88_A Phosphoribosyl isomeras 97.7 9.1E-05 3.1E-09 66.9 8.8 77 218-298 32-108 (244)
135 2w6r_A Imidazole glycerol phos 97.7 5.3E-05 1.8E-09 69.5 7.2 77 218-297 31-107 (266)
136 1ypf_A GMP reductase; GUAC, pu 97.7 8.7E-05 3E-09 70.9 8.1 129 101-292 46-176 (336)
137 1vhc_A Putative KHG/KDPG aldol 97.6 0.00066 2.3E-08 61.1 13.0 115 129-292 22-136 (224)
138 3ceu_A Thiamine phosphate pyro 97.6 7.3E-05 2.5E-09 66.5 6.7 81 216-298 94-177 (210)
139 1vzw_A Phosphoribosyl isomeras 97.6 0.00012 4E-09 66.3 8.1 76 218-297 33-108 (244)
140 3r12_A Deoxyribose-phosphate a 97.6 0.00016 5.5E-09 66.3 8.9 75 216-294 168-246 (260)
141 3exr_A RMPD (hexulose-6-phosph 97.6 0.00053 1.8E-08 61.5 11.9 97 218-321 122-218 (221)
142 3ovp_A Ribulose-phosphate 3-ep 97.6 0.0011 3.8E-08 59.7 13.8 89 230-326 134-224 (228)
143 3lab_A Putative KDPG (2-keto-3 97.6 0.00046 1.6E-08 61.7 11.0 158 86-295 23-189 (217)
144 3cwo_X Beta/alpha-barrel prote 97.6 0.0003 1E-08 62.0 9.9 77 219-298 132-208 (237)
145 1xg4_A Probable methylisocitra 97.6 0.0021 7.2E-08 60.1 16.0 188 74-299 18-241 (295)
146 3vzx_A Heptaprenylglyceryl pho 97.6 0.00063 2.1E-08 61.3 11.8 72 219-298 138-213 (228)
147 3tha_A Tryptophan synthase alp 97.6 0.00078 2.7E-08 61.6 12.6 86 218-306 152-240 (252)
148 1wbh_A KHG/KDPG aldolase; lyas 97.6 0.0014 4.7E-08 58.6 13.7 117 127-292 19-135 (214)
149 1tqj_A Ribulose-phosphate 3-ep 97.5 0.00023 7.9E-09 64.2 8.4 166 92-297 21-205 (230)
150 3ndo_A Deoxyribose-phosphate a 97.5 0.0004 1.4E-08 62.7 9.5 68 224-294 153-220 (231)
151 2czd_A Orotidine 5'-phosphate 97.5 0.00023 7.8E-09 63.1 7.8 82 221-319 123-205 (208)
152 1q6o_A Humps, 3-keto-L-gulonat 97.5 0.0026 8.8E-08 56.5 14.8 93 220-320 119-212 (216)
153 1vhc_A Putative KHG/KDPG aldol 97.4 0.00096 3.3E-08 60.0 11.4 73 216-297 116-189 (224)
154 3kts_A Glycerol uptake operon 97.4 0.00018 6.1E-09 63.1 5.8 65 223-298 120-184 (192)
155 1qap_A Quinolinic acid phospho 97.4 0.00053 1.8E-08 64.2 9.4 69 217-296 215-283 (296)
156 1wbh_A KHG/KDPG aldolase; lyas 97.3 0.0013 4.5E-08 58.7 10.9 73 216-297 115-188 (214)
157 1mxs_A KDPG aldolase; 2-keto-3 97.3 0.0018 6E-08 58.3 11.2 118 126-292 28-145 (225)
158 2f6u_A GGGPS, (S)-3-O-geranylg 97.3 0.00071 2.4E-08 61.2 8.5 72 219-298 147-223 (234)
159 3inp_A D-ribulose-phosphate 3- 97.2 0.0022 7.6E-08 58.4 11.4 161 114-319 77-243 (246)
160 2b7n_A Probable nicotinate-nuc 97.2 0.00045 1.6E-08 64.0 6.6 71 216-297 188-261 (273)
161 3s1x_A Probable transaldolase; 97.2 0.0077 2.6E-07 53.9 14.2 186 90-315 9-212 (223)
162 1viz_A PCRB protein homolog; s 97.2 0.0009 3.1E-08 60.8 8.0 73 218-298 139-215 (240)
163 3ve9_A Orotidine-5'-phosphate 97.2 0.00076 2.6E-08 60.3 7.3 88 219-324 117-205 (215)
164 1x1o_A Nicotinate-nucleotide p 97.1 0.0017 5.7E-08 60.5 9.7 70 216-296 202-271 (286)
165 2qr6_A IMP dehydrogenase/GMP r 97.1 0.0013 4.4E-08 64.0 8.3 73 219-294 167-240 (393)
166 1n7k_A Deoxyribose-phosphate a 97.1 0.0014 4.6E-08 59.4 7.8 72 216-293 143-221 (234)
167 3r8r_A Transaldolase; pentose 97.0 0.011 3.9E-07 52.4 13.3 185 90-314 9-209 (212)
168 2jbm_A Nicotinate-nucleotide p 97.0 0.0007 2.4E-08 63.6 5.7 70 216-296 203-275 (299)
169 1vcv_A Probable deoxyribose-ph 97.0 0.0024 8.3E-08 57.4 8.7 78 216-293 123-220 (226)
170 1gvf_A Tagatose-bisphosphate a 97.0 0.071 2.4E-06 49.5 18.8 107 218-329 155-281 (286)
171 4gj1_A 1-(5-phosphoribosyl)-5- 97.0 0.0013 4.4E-08 59.8 6.9 78 216-298 150-229 (243)
172 4dbe_A Orotidine 5'-phosphate 96.9 0.0029 9.8E-08 56.8 8.8 88 220-325 125-213 (222)
173 1tqx_A D-ribulose-5-phosphate 96.9 0.0061 2.1E-07 54.8 10.4 94 219-320 126-222 (227)
174 3pm6_A Putative fructose-bisph 96.9 0.075 2.6E-06 49.6 18.0 114 218-331 172-298 (306)
175 3ctl_A D-allulose-6-phosphate 96.8 0.0061 2.1E-07 55.0 10.0 85 229-320 127-218 (231)
176 3tqv_A Nicotinate-nucleotide p 96.8 0.003 1E-07 58.6 8.2 70 216-296 204-273 (287)
177 3nl6_A Thiamine biosynthetic b 96.8 0.0061 2.1E-07 61.7 10.8 81 217-298 115-214 (540)
178 1mxs_A KDPG aldolase; 2-keto-3 96.8 0.0015 5.1E-08 58.8 5.5 72 216-297 125-198 (225)
179 4gj1_A 1-(5-phosphoribosyl)-5- 96.7 0.0027 9.2E-08 57.7 6.9 74 219-295 33-106 (243)
180 3c2e_A Nicotinate-nucleotide p 96.7 0.00076 2.6E-08 63.2 3.1 69 216-295 205-279 (294)
181 1o4u_A Type II quinolic acid p 96.6 0.0012 4.2E-08 61.4 4.2 68 217-295 200-270 (285)
182 3gnn_A Nicotinate-nucleotide p 96.6 0.0039 1.3E-07 58.2 7.6 68 217-295 216-283 (298)
183 1jvn_A Glutamine, bifunctional 96.6 0.0027 9.1E-08 64.6 6.4 78 219-298 282-372 (555)
184 3paj_A Nicotinate-nucleotide p 96.6 0.0071 2.4E-07 57.0 8.8 69 216-295 237-305 (320)
185 3l0g_A Nicotinate-nucleotide p 96.5 0.0056 1.9E-07 57.1 7.7 69 216-295 213-281 (300)
186 2a4a_A Deoxyribose-phosphate a 96.5 0.0043 1.5E-07 57.5 6.9 62 223-288 178-249 (281)
187 3w01_A Heptaprenylglyceryl pho 96.5 0.011 3.7E-07 53.4 9.3 72 219-298 143-219 (235)
188 1qpo_A Quinolinate acid phosph 96.5 0.0041 1.4E-07 57.8 6.6 68 217-295 201-271 (284)
189 1p1x_A Deoxyribose-phosphate a 96.4 0.0048 1.6E-07 56.6 6.7 62 223-288 156-222 (260)
190 2h6r_A Triosephosphate isomera 96.4 0.0055 1.9E-07 54.7 6.9 80 219-298 120-204 (219)
191 3q94_A Fructose-bisphosphate a 96.4 0.42 1.4E-05 44.3 19.6 109 218-329 159-285 (288)
192 1to3_A Putative aldolase YIHT; 96.3 0.012 4.2E-07 55.2 9.0 72 222-299 182-260 (304)
193 1vkf_A Glycerol uptake operon 96.3 0.0034 1.2E-07 54.6 4.4 36 263-299 148-183 (188)
194 3cu2_A Ribulose-5-phosphate 3- 96.2 0.0087 3E-07 54.2 7.0 67 229-297 147-221 (237)
195 1zfj_A Inosine monophosphate d 96.2 0.009 3.1E-07 59.5 7.9 236 41-293 12-302 (491)
196 1vc4_A Indole-3-glycerol phosp 96.2 0.03 1E-06 51.1 10.5 73 219-297 67-139 (254)
197 3r2g_A Inosine 5'-monophosphat 96.1 0.013 4.6E-07 56.2 8.3 69 219-293 101-169 (361)
198 2isw_A Putative fructose-1,6-b 96.0 0.59 2E-05 43.9 18.6 109 218-329 153-304 (323)
199 3nvt_A 3-deoxy-D-arabino-heptu 96.0 0.24 8.1E-06 47.9 16.3 208 55-295 123-348 (385)
200 3iwp_A Copper homeostasis prot 96.0 0.094 3.2E-06 48.5 12.8 128 130-293 105-238 (287)
201 3daq_A DHDPS, dihydrodipicolin 96.0 0.015 5.1E-07 54.1 7.6 94 220-318 26-126 (292)
202 1pii_A N-(5'phosphoribosyl)ant 95.9 0.031 1.1E-06 55.2 10.0 68 215-293 215-282 (452)
203 1vpx_A Protein (transaldolase 95.9 0.19 6.4E-06 45.1 14.1 99 216-317 120-223 (230)
204 2pgw_A Muconate cycloisomerase 95.9 0.24 8.3E-06 47.5 16.1 122 133-296 146-274 (384)
205 3cpr_A Dihydrodipicolinate syn 95.8 0.032 1.1E-06 52.3 9.2 93 220-317 40-139 (304)
206 2agk_A 1-(5-phosphoribosyl)-5- 95.8 0.0089 3.1E-07 54.8 5.2 68 219-297 40-107 (260)
207 3flu_A DHDPS, dihydrodipicolin 95.7 0.027 9.2E-07 52.5 8.3 93 220-317 31-130 (297)
208 1xky_A Dihydrodipicolinate syn 95.7 0.027 9.1E-07 52.7 8.2 93 220-317 36-135 (301)
209 1y0e_A Putative N-acetylmannos 95.7 0.31 1.1E-05 42.7 14.8 72 219-295 77-148 (223)
210 3fkr_A L-2-keto-3-deoxyarabona 95.7 0.022 7.6E-07 53.5 7.5 96 220-317 32-134 (309)
211 3tsm_A IGPS, indole-3-glycerol 95.6 0.044 1.5E-06 50.5 9.2 73 219-297 81-153 (272)
212 1f6k_A N-acetylneuraminate lya 95.6 0.027 9.3E-07 52.4 7.9 94 220-318 27-128 (293)
213 3tak_A DHDPS, dihydrodipicolin 95.6 0.046 1.6E-06 50.8 9.4 93 220-317 25-124 (291)
214 2yxg_A DHDPS, dihydrodipicolin 95.6 0.032 1.1E-06 51.7 8.1 92 221-317 25-123 (289)
215 2wkj_A N-acetylneuraminate lya 95.5 0.047 1.6E-06 51.0 9.2 95 220-319 35-136 (303)
216 2r8w_A AGR_C_1641P; APC7498, d 95.5 0.03 1E-06 53.1 7.9 93 220-317 58-157 (332)
217 3b4u_A Dihydrodipicolinate syn 95.5 0.027 9.1E-07 52.5 7.3 96 220-319 27-129 (294)
218 2ehh_A DHDPS, dihydrodipicolin 95.5 0.031 1E-06 52.1 7.7 92 221-317 25-123 (294)
219 3na8_A Putative dihydrodipicol 95.5 0.02 7E-07 53.9 6.5 93 220-317 48-147 (315)
220 4fo4_A Inosine 5'-monophosphat 95.5 0.035 1.2E-06 53.4 8.2 70 218-293 108-177 (366)
221 3l21_A DHDPS, dihydrodipicolin 95.5 0.039 1.3E-06 51.7 8.4 92 220-316 39-137 (304)
222 3qze_A DHDPS, dihydrodipicolin 95.4 0.05 1.7E-06 51.1 9.0 93 220-317 47-146 (314)
223 2rfg_A Dihydrodipicolinate syn 95.4 0.031 1.1E-06 52.1 7.4 93 220-317 24-123 (297)
224 3si9_A DHDPS, dihydrodipicolin 95.4 0.045 1.5E-06 51.5 8.5 93 220-317 46-145 (315)
225 2ojp_A DHDPS, dihydrodipicolin 95.4 0.031 1.1E-06 52.0 7.2 92 220-316 25-123 (292)
226 2v9d_A YAGE; dihydrodipicolini 95.4 0.049 1.7E-06 51.9 8.7 93 220-317 55-154 (343)
227 3khj_A Inosine-5-monophosphate 95.3 0.041 1.4E-06 52.8 8.2 68 219-293 106-173 (361)
228 3qfe_A Putative dihydrodipicol 95.3 0.037 1.3E-06 52.1 7.7 95 220-317 35-136 (318)
229 3m47_A Orotidine 5'-phosphate 95.3 0.023 7.9E-07 51.0 6.0 83 221-321 141-224 (228)
230 1o5k_A DHDPS, dihydrodipicolin 95.3 0.031 1.1E-06 52.4 7.1 91 221-316 37-134 (306)
231 3s5o_A 4-hydroxy-2-oxoglutarat 95.3 0.03 1E-06 52.5 6.9 94 221-317 39-139 (307)
232 3m5v_A DHDPS, dihydrodipicolin 95.3 0.04 1.4E-06 51.5 7.6 93 220-317 31-131 (301)
233 4e38_A Keto-hydroxyglutarate-a 95.2 0.032 1.1E-06 50.2 6.6 78 200-292 76-153 (232)
234 2ovl_A Putative racemase; stru 95.2 0.18 6.1E-06 48.2 12.4 120 134-294 146-273 (371)
235 4avf_A Inosine-5'-monophosphat 95.2 0.043 1.5E-06 54.8 8.1 238 42-293 11-298 (490)
236 2vc6_A MOSA, dihydrodipicolina 95.2 0.025 8.6E-07 52.6 6.0 93 220-317 24-123 (292)
237 1mdl_A Mandelate racemase; iso 95.2 0.17 5.8E-06 48.1 11.9 121 133-294 143-271 (359)
238 3lye_A Oxaloacetate acetyl hyd 95.2 0.53 1.8E-05 44.0 14.9 190 73-298 25-252 (307)
239 3iv3_A Tagatose 1,6-diphosphat 95.1 0.022 7.5E-07 54.0 5.4 106 223-338 194-318 (332)
240 3ffs_A Inosine-5-monophosphate 95.0 0.037 1.3E-06 53.8 6.9 68 219-293 145-212 (400)
241 3ru6_A Orotidine 5'-phosphate 95.0 0.061 2.1E-06 50.3 8.1 80 221-320 162-251 (303)
242 3ldv_A Orotidine 5'-phosphate 95.0 0.047 1.6E-06 49.8 7.1 80 220-319 165-254 (255)
243 3e96_A Dihydrodipicolinate syn 95.0 0.021 7.2E-07 53.8 4.9 93 221-319 37-136 (316)
244 1jcn_A Inosine monophosphate d 95.0 0.05 1.7E-06 54.5 7.9 69 219-293 256-324 (514)
245 4fxs_A Inosine-5'-monophosphat 95.0 0.058 2E-06 54.0 8.3 233 42-293 12-300 (496)
246 3igs_A N-acetylmannosamine-6-p 94.9 0.71 2.4E-05 41.2 14.7 65 219-292 90-155 (232)
247 3d0c_A Dihydrodipicolinate syn 94.9 0.03 1E-06 52.7 5.7 93 220-318 36-135 (314)
248 3tfx_A Orotidine 5'-phosphate 94.9 0.085 2.9E-06 48.2 8.6 80 221-320 148-237 (259)
249 3h5d_A DHDPS, dihydrodipicolin 94.9 0.058 2E-06 50.6 7.7 94 219-317 30-131 (311)
250 3dz1_A Dihydrodipicolinate syn 94.9 0.074 2.5E-06 49.9 8.4 93 220-319 32-131 (313)
251 3qja_A IGPS, indole-3-glycerol 94.9 0.062 2.1E-06 49.5 7.6 71 219-295 74-144 (272)
252 1nsj_A PRAI, phosphoribosyl an 94.8 0.44 1.5E-05 41.8 12.8 152 91-294 12-181 (205)
253 3q58_A N-acetylmannosamine-6-p 94.8 0.88 3E-05 40.5 14.9 65 219-292 90-155 (229)
254 2hmc_A AGR_L_411P, dihydrodipi 94.8 0.047 1.6E-06 52.1 6.6 90 221-317 51-147 (344)
255 2yyu_A Orotidine 5'-phosphate 94.7 0.086 2.9E-06 47.6 8.1 78 223-320 149-236 (246)
256 3eoo_A Methylisocitrate lyase; 94.7 0.9 3.1E-05 42.2 15.0 189 74-299 23-245 (298)
257 3iwp_A Copper homeostasis prot 94.5 0.11 3.8E-06 48.0 8.4 73 217-293 46-131 (287)
258 2hzg_A Mandelate racemase/muco 94.5 1 3.4E-05 43.4 15.7 126 132-295 143-279 (401)
259 4dpp_A DHDPS 2, dihydrodipicol 94.5 0.044 1.5E-06 52.6 5.7 92 221-317 84-182 (360)
260 3a5f_A Dihydrodipicolinate syn 94.4 0.032 1.1E-06 51.8 4.6 77 221-299 26-109 (291)
261 1rvk_A Isomerase/lactonizing e 94.4 0.64 2.2E-05 44.4 13.9 129 133-296 148-285 (382)
262 1vrd_A Inosine-5'-monophosphat 94.4 0.093 3.2E-06 52.2 8.2 68 220-293 239-306 (494)
263 3tr2_A Orotidine 5'-phosphate 94.3 0.1 3.6E-06 47.0 7.6 81 220-320 147-237 (239)
264 3eb2_A Putative dihydrodipicol 94.1 0.046 1.6E-06 51.0 5.0 93 220-317 28-127 (300)
265 2nql_A AGR_PAT_674P, isomerase 94.1 0.3 1E-05 47.0 10.8 121 133-295 163-291 (388)
266 1s2w_A Phosphoenolpyruvate pho 94.0 0.34 1.2E-05 45.0 10.6 73 219-299 172-244 (295)
267 1l6w_A Fructose-6-phosphate al 94.0 0.31 1.1E-05 43.4 9.8 97 216-315 110-211 (220)
268 1twd_A Copper homeostasis prot 93.9 0.26 8.8E-06 44.8 9.2 74 217-294 8-94 (256)
269 1eep_A Inosine 5'-monophosphat 93.9 0.12 4E-06 50.2 7.5 68 219-293 154-222 (404)
270 2yw3_A 4-hydroxy-2-oxoglutarat 93.9 0.16 5.6E-06 44.6 7.8 110 132-292 21-130 (207)
271 4eiv_A Deoxyribose-phosphate a 93.8 0.27 9.2E-06 45.5 9.4 61 224-288 173-256 (297)
272 1nu5_A Chloromuconate cycloiso 93.8 1.2 4E-05 42.3 14.3 122 133-295 141-271 (370)
273 1eix_A Orotidine 5'-monophosph 93.7 0.16 5.3E-06 45.9 7.6 75 225-319 157-241 (245)
274 4adt_A Pyridoxine biosynthetic 93.6 0.16 5.6E-06 47.3 7.7 72 217-290 28-104 (297)
275 3usb_A Inosine-5'-monophosphat 93.6 0.16 5.5E-06 50.9 8.1 234 41-293 35-325 (511)
276 1dbt_A Orotidine 5'-phosphate 93.5 0.18 6.1E-06 45.3 7.5 79 222-320 147-235 (239)
277 1xm3_A Thiazole biosynthesis p 93.5 0.24 8.1E-06 45.2 8.4 38 201-238 171-208 (264)
278 3ozy_A Putative mandelate race 93.5 0.61 2.1E-05 44.9 11.8 121 132-294 149-278 (389)
279 1v5x_A PRA isomerase, phosphor 93.5 0.81 2.8E-05 40.1 11.6 151 91-294 11-175 (203)
280 2bdq_A Copper homeostasis prot 93.4 2 6.9E-05 38.1 14.0 130 130-293 70-207 (224)
281 2c6q_A GMP reductase 2; TIM ba 93.4 0.19 6.4E-06 47.9 7.9 67 221-293 121-189 (351)
282 2og9_A Mandelate racemase/muco 93.4 0.83 2.9E-05 43.9 12.6 120 134-294 162-289 (393)
283 1w0m_A TIM, triosephosphate is 93.3 0.35 1.2E-05 43.2 9.0 80 219-298 123-207 (226)
284 2rdx_A Mandelate racemase/muco 93.3 0.84 2.9E-05 43.6 12.5 117 133-294 144-268 (379)
285 1wv2_A Thiazole moeity, thiazo 93.2 0.7 2.4E-05 42.0 10.9 108 123-237 102-216 (265)
286 1hg3_A Triosephosphate isomera 93.1 0.63 2.2E-05 41.5 10.4 80 219-298 126-210 (225)
287 2qgy_A Enolase from the enviro 93.1 1.3 4.5E-05 42.5 13.4 120 133-293 148-275 (391)
288 1rvg_A Fructose-1,6-bisphospha 93.0 3 0.0001 38.8 15.3 110 218-329 153-302 (305)
289 1wx0_A Transaldolase; structur 92.9 0.28 9.5E-06 43.8 7.7 85 216-303 117-204 (223)
290 2v82_A 2-dehydro-3-deoxy-6-pho 92.9 0.31 1.1E-05 42.4 8.0 66 220-294 22-88 (212)
291 1vqt_A Orotidine 5'-phosphate 92.8 0.073 2.5E-06 47.1 3.8 73 222-319 131-212 (213)
292 3nav_A Tryptophan synthase alp 92.8 0.42 1.4E-05 43.9 8.9 21 216-236 216-236 (271)
293 1vs1_A 3-deoxy-7-phosphoheptul 92.5 5.8 0.0002 36.3 16.3 209 56-296 20-245 (276)
294 3vnd_A TSA, tryptophan synthas 92.5 0.5 1.7E-05 43.2 9.0 27 211-237 208-235 (267)
295 1tkk_A Similar to chloromucona 92.4 1.4 4.9E-05 41.6 12.7 122 133-295 139-270 (366)
296 3rcy_A Mandelate racemase/muco 92.3 2.1 7.3E-05 41.7 14.0 134 133-295 145-286 (433)
297 4dwd_A Mandelate racemase/muco 92.3 4.6 0.00016 38.8 16.2 127 133-294 138-272 (393)
298 3stp_A Galactonate dehydratase 92.3 1.4 4.6E-05 42.8 12.5 129 133-297 178-315 (412)
299 2pp0_A L-talarate/galactarate 92.3 1.5 5E-05 42.2 12.6 120 134-294 175-302 (398)
300 2wqp_A Polysialic acid capsule 92.2 3.4 0.00012 39.2 14.7 242 63-328 7-273 (349)
301 3n9r_A Fructose-bisphosphate a 92.1 4.5 0.00015 37.6 15.0 110 218-329 155-304 (307)
302 2p8b_A Mandelate racemase/muco 92.1 1.5 5.1E-05 41.6 12.2 121 133-295 140-269 (369)
303 4af0_A Inosine-5'-monophosphat 91.7 0.41 1.4E-05 48.0 7.9 238 41-294 60-351 (556)
304 1zco_A 2-dehydro-3-deoxyphosph 91.6 7.4 0.00025 35.2 15.8 204 60-296 10-230 (262)
305 2qde_A Mandelate racemase/muco 91.6 1.4 4.8E-05 42.3 11.5 120 133-294 144-271 (397)
306 2oz8_A MLL7089 protein; struct 91.3 6.9 0.00024 37.3 16.1 119 134-293 145-273 (389)
307 3ih1_A Methylisocitrate lyase; 91.3 1.1 3.7E-05 41.8 10.0 188 73-299 29-249 (305)
308 3jva_A Dipeptide epimerase; en 91.2 1.8 6.1E-05 40.9 11.7 122 133-296 138-267 (354)
309 2qdd_A Mandelate racemase/muco 91.2 5.5 0.00019 37.8 15.2 120 133-296 144-270 (378)
310 1zlp_A PSR132, petal death pro 91.1 1.3 4.3E-05 41.6 10.3 190 73-299 39-263 (318)
311 1vr6_A Phospho-2-dehydro-3-deo 91.1 1.3 4.4E-05 42.1 10.5 259 24-328 48-347 (350)
312 3zwt_A Dihydroorotate dehydrog 91.1 1.2 4E-05 42.7 10.4 104 123-236 221-326 (367)
313 3eez_A Putative mandelate race 90.9 3.3 0.00011 39.5 13.4 120 132-296 143-270 (378)
314 3i4k_A Muconate lactonizing en 90.8 5 0.00017 38.3 14.6 122 132-294 146-276 (383)
315 2zad_A Muconate cycloisomerase 90.8 4.2 0.00014 38.0 13.9 118 133-292 138-264 (345)
316 2r91_A 2-keto-3-deoxy-(6-phosp 90.7 0.69 2.4E-05 42.6 8.0 91 221-318 23-120 (286)
317 1yxy_A Putative N-acetylmannos 90.6 1.1 3.9E-05 39.4 9.2 68 219-290 90-157 (234)
318 1tzz_A Hypothetical protein L1 90.6 1.6 5.6E-05 41.8 10.9 119 134-293 165-295 (392)
319 2bdq_A Copper homeostasis prot 90.6 0.24 8.1E-06 44.2 4.5 70 218-294 9-97 (224)
320 2htm_A Thiazole biosynthesis p 90.5 0.42 1.4E-05 43.6 6.1 38 200-237 168-207 (268)
321 2zbt_A Pyridoxal biosynthesis 90.4 0.62 2.1E-05 42.9 7.5 69 217-290 28-104 (297)
322 1jub_A Dihydroorotate dehydrog 90.4 1.3 4.5E-05 40.8 9.8 157 71-236 93-270 (311)
323 4e5t_A Mandelate racemase / mu 89.7 1.8 6.2E-05 41.7 10.5 133 133-294 150-290 (404)
324 1twd_A Copper homeostasis prot 89.7 4.3 0.00015 36.7 12.1 127 130-293 67-198 (256)
325 1f76_A Dihydroorotate dehydrog 89.6 1.6 5.5E-05 40.8 9.8 104 123-236 212-317 (336)
326 1vli_A Spore coat polysacchari 89.4 5.2 0.00018 38.4 13.1 140 132-292 40-190 (385)
327 2hxt_A L-fuconate dehydratase; 89.3 4.4 0.00015 39.4 13.0 119 134-293 198-324 (441)
328 2hjp_A Phosphonopyruvate hydro 89.3 1.4 4.9E-05 40.7 8.9 184 90-299 24-241 (290)
329 2gdq_A YITF; mandelate racemas 89.3 2.2 7.5E-05 40.7 10.6 120 133-293 135-266 (382)
330 1ea0_A Glutamate synthase [NAD 89.0 4.3 0.00015 45.4 13.7 118 221-341 591-726 (1479)
331 3sr7_A Isopentenyl-diphosphate 89.0 0.81 2.8E-05 43.8 7.3 73 218-293 155-237 (365)
332 3bjs_A Mandelate racemase/muco 89.0 1.6 5.4E-05 42.5 9.5 119 133-293 183-311 (428)
333 2ps2_A Putative mandelate race 89.0 3.7 0.00013 38.9 11.9 118 133-295 145-271 (371)
334 3rr1_A GALD, putative D-galact 88.9 4.3 0.00015 39.1 12.5 130 132-294 123-260 (405)
335 2gl5_A Putative dehydratase pr 88.8 3.7 0.00012 39.5 11.9 140 134-293 150-299 (410)
336 3ro6_B Putative chloromuconate 88.7 2.4 8.2E-05 40.1 10.4 122 133-296 139-269 (356)
337 1w3i_A EDA, 2-keto-3-deoxy glu 88.7 1 3.5E-05 41.6 7.5 91 220-317 23-120 (293)
338 3mwc_A Mandelate racemase/muco 88.6 4.6 0.00016 38.9 12.4 123 135-295 164-287 (400)
339 3sjn_A Mandelate racemase/muco 88.6 4.6 0.00016 38.4 12.3 121 135-294 147-276 (374)
340 3dg3_A Muconate cycloisomerase 88.6 9.7 0.00033 36.0 14.6 125 132-297 137-270 (367)
341 1vli_A Spore coat polysacchari 88.6 18 0.0006 34.7 16.8 235 63-323 16-280 (385)
342 3q45_A Mandelate racemase/muco 88.5 3.9 0.00013 38.8 11.6 120 133-294 139-266 (368)
343 2wqp_A Polysialic acid capsule 88.4 4.9 0.00017 38.1 12.1 139 132-292 31-180 (349)
344 3toy_A Mandelate racemase/muco 88.4 5 0.00017 38.4 12.4 121 133-294 166-295 (383)
345 3ugv_A Enolase; enzyme functio 88.3 8.7 0.0003 36.7 14.1 123 133-296 170-303 (390)
346 2poz_A Putative dehydratase; o 88.3 3 0.0001 39.9 10.9 137 133-293 136-280 (392)
347 1i4n_A Indole-3-glycerol phosp 88.2 6.1 0.00021 35.6 12.2 86 200-294 93-179 (251)
348 3daq_A DHDPS, dihydrodipicolin 88.2 15 0.00052 33.5 15.5 179 73-294 9-208 (292)
349 2ze3_A DFA0005; organic waste 88.2 2.8 9.5E-05 38.4 10.0 67 219-299 170-238 (275)
350 1sjd_A N-acylamino acid racema 88.1 3.6 0.00012 38.9 11.1 116 133-293 140-263 (368)
351 4e4u_A Mandalate racemase/muco 88.0 3.1 0.00011 40.2 10.9 132 133-293 143-282 (412)
352 3r4e_A Mandelate racemase/muco 88.0 4.4 0.00015 39.2 11.9 151 132-294 141-302 (418)
353 2nuw_A 2-keto-3-deoxygluconate 88.0 1.8 6.1E-05 39.8 8.7 91 220-317 23-120 (288)
354 4a29_A Engineered retro-aldol 87.9 1.9 6.4E-05 39.1 8.4 69 219-293 65-133 (258)
355 1gox_A (S)-2-hydroxy-acid oxid 87.7 2.7 9.4E-05 40.0 10.1 42 250-294 213-254 (370)
356 3tj4_A Mandelate racemase; eno 87.5 7.1 0.00024 37.0 12.9 119 134-293 151-278 (372)
357 3elf_A Fructose-bisphosphate a 87.5 12 0.00041 35.4 14.1 114 218-331 182-340 (349)
358 3i65_A Dihydroorotate dehydrog 87.3 1.5 5.1E-05 42.7 7.9 102 123-236 269-373 (415)
359 2nv1_A Pyridoxal biosynthesis 87.2 1.8 6.1E-05 40.0 8.2 69 216-291 27-105 (305)
360 3o07_A Pyridoxine biosynthesis 87.1 1.2 4.2E-05 40.8 6.7 72 217-290 18-94 (291)
361 1me8_A Inosine-5'-monophosphat 87.0 0.99 3.4E-05 45.0 6.7 70 220-294 244-313 (503)
362 3vcn_A Mannonate dehydratase; 86.8 5.2 0.00018 38.8 11.6 147 132-294 148-309 (425)
363 3sgz_A Hydroxyacid oxidase 2; 86.8 2.3 7.9E-05 40.4 8.8 43 248-293 203-245 (352)
364 3sbf_A Mandelate racemase / mu 86.7 7.1 0.00024 37.4 12.5 144 132-294 131-283 (401)
365 4ef8_A Dihydroorotate dehydrog 86.6 1.6 5.6E-05 41.5 7.7 105 120-236 191-305 (354)
366 3ddm_A Putative mandelate race 86.3 5.8 0.0002 38.0 11.6 118 134-293 155-281 (392)
367 1xky_A Dihydrodipicolinate syn 86.2 20 0.00069 32.9 20.3 183 73-298 18-221 (301)
368 1mzh_A Deoxyribose-phosphate a 86.2 4.9 0.00017 35.4 10.2 87 118-236 112-203 (225)
369 2e6f_A Dihydroorotate dehydrog 86.1 1.7 5.9E-05 40.1 7.5 110 122-236 160-272 (314)
370 2pcq_A Putative dihydrodipicol 86.1 0.92 3.2E-05 41.7 5.5 91 221-317 23-117 (283)
371 3b8i_A PA4872 oxaloacetate dec 86.0 1.7 5.9E-05 40.1 7.3 188 74-299 22-240 (287)
372 3qm3_A Fructose-bisphosphate a 85.7 10 0.00036 35.9 12.7 82 218-299 195-293 (357)
373 2vc6_A MOSA, dihydrodipicolina 85.6 21 0.00072 32.5 21.1 179 73-295 7-207 (292)
374 2zc8_A N-acylamino acid racema 85.6 5.9 0.0002 37.3 11.1 116 133-293 140-262 (369)
375 2nli_A Lactate oxidase; flavoe 85.5 2.4 8.1E-05 40.5 8.3 42 249-293 216-257 (368)
376 3go2_A Putative L-alanine-DL-g 85.5 10 0.00034 36.5 12.9 65 218-294 224-293 (409)
377 2o56_A Putative mandelate race 85.4 7.6 0.00026 37.1 12.0 136 134-293 152-296 (407)
378 1r0m_A N-acylamino acid racema 85.3 5.7 0.0002 37.6 10.9 115 133-293 147-269 (375)
379 1tx2_A DHPS, dihydropteroate s 85.2 3.2 0.00011 38.4 8.8 73 220-294 66-143 (297)
380 1xg4_A Probable methylisocitra 85.2 1.9 6.4E-05 40.0 7.1 80 211-292 18-113 (295)
381 3v3w_A Starvation sensing prot 85.1 10 0.00035 36.7 12.8 151 132-294 147-308 (424)
382 3fa4_A 2,3-dimethylmalate lyas 84.9 3.5 0.00012 38.3 8.9 190 74-299 19-245 (302)
383 1wa3_A 2-keto-3-deoxy-6-phosph 84.7 4.1 0.00014 34.8 8.8 65 221-294 26-90 (205)
384 3eb2_A Putative dihydrodipicol 84.6 24 0.00082 32.3 19.7 179 73-294 10-209 (300)
385 1dos_A Aldolase class II; lyas 84.5 16 0.00054 34.7 13.3 82 218-299 197-294 (358)
386 3sz8_A 2-dehydro-3-deoxyphosph 84.4 16 0.00055 33.5 13.0 105 222-328 153-278 (285)
387 1qop_A Tryptophan synthase alp 84.4 4.2 0.00014 36.8 9.1 28 210-237 206-234 (268)
388 2qq6_A Mandelate racemase/muco 84.2 7.8 0.00027 37.2 11.4 136 134-294 149-292 (410)
389 3flu_A DHDPS, dihydrodipicolin 84.2 25 0.00085 32.1 19.6 180 73-294 13-212 (297)
390 1kbi_A Cytochrome B2, L-LCR; f 84.0 2.8 9.5E-05 41.9 8.3 41 250-293 331-371 (511)
391 3r0u_A Enzyme of enolase super 84.0 13 0.00043 35.4 12.7 122 133-296 141-272 (379)
392 3qze_A DHDPS, dihydrodipicolin 83.8 27 0.00092 32.2 20.8 180 73-294 29-228 (314)
393 1h1y_A D-ribulose-5-phosphate 83.8 7 0.00024 34.2 10.1 124 132-294 15-146 (228)
394 1p0k_A Isopentenyl-diphosphate 83.8 4.5 0.00015 38.0 9.3 73 219-293 128-209 (349)
395 3vkj_A Isopentenyl-diphosphate 83.7 2.6 8.7E-05 40.3 7.6 72 218-292 135-217 (368)
396 2ox4_A Putative mandelate race 83.4 6.7 0.00023 37.5 10.6 138 134-295 146-292 (403)
397 3noy_A 4-hydroxy-3-methylbut-2 83.3 3 0.0001 39.6 7.6 65 219-293 48-112 (366)
398 1aj0_A DHPS, dihydropteroate s 83.2 6.8 0.00023 35.9 10.0 73 220-294 41-118 (282)
399 3my9_A Muconate cycloisomerase 83.0 11 0.00039 35.6 11.9 66 220-295 208-274 (377)
400 1ofd_A Ferredoxin-dependent gl 83.0 15 0.00051 41.3 14.1 121 221-341 585-733 (1520)
401 1tv5_A Dhodehase, dihydroorota 82.9 4 0.00014 40.0 8.8 101 124-236 298-401 (443)
402 3ih1_A Methylisocitrate lyase; 82.9 5 0.00017 37.3 9.0 80 211-293 30-124 (305)
403 3gd6_A Muconate cycloisomerase 82.9 8.6 0.00029 36.7 11.0 120 133-296 141-271 (391)
404 3qw3_A Orotidine-5-phosphate d 82.8 2.3 7.8E-05 38.5 6.5 77 228-322 168-251 (255)
405 1z41_A YQJM, probable NADH-dep 82.7 9.5 0.00033 35.6 11.1 91 122-236 209-306 (338)
406 3m5v_A DHDPS, dihydrodipicolin 82.7 29 0.00099 31.8 19.8 177 73-294 14-213 (301)
407 3eoo_A Methylisocitrate lyase; 82.5 6 0.0002 36.6 9.3 81 211-293 23-118 (298)
408 2vws_A YFAU, 2-keto-3-deoxy su 82.5 5.9 0.0002 35.9 9.2 73 213-293 22-97 (267)
409 3b8i_A PA4872 oxaloacetate dec 82.4 3.7 0.00013 37.9 7.8 83 211-293 22-117 (287)
410 3vav_A 3-methyl-2-oxobutanoate 82.4 5.6 0.00019 36.4 8.9 83 211-293 30-126 (275)
411 3gr7_A NADPH dehydrogenase; fl 82.1 11 0.00037 35.4 11.2 92 121-236 208-306 (340)
412 3na8_A Putative dihydrodipicol 82.0 32 0.0011 31.8 23.4 181 72-294 29-230 (315)
413 3g8r_A Probable spore coat pol 81.8 22 0.00074 33.6 13.0 233 71-329 4-262 (350)
414 2qiw_A PEP phosphonomutase; st 81.7 3.6 0.00012 37.2 7.4 66 219-295 170-238 (255)
415 3mkc_A Racemase; metabolic pro 81.4 23 0.00078 33.8 13.5 65 219-293 218-287 (394)
416 3ik4_A Mandelate racemase/muco 81.3 32 0.0011 32.4 14.3 123 133-294 142-271 (365)
417 2y5s_A DHPS, dihydropteroate s 81.2 8.8 0.0003 35.4 10.0 74 219-294 48-125 (294)
418 3mqt_A Mandelate racemase/muco 81.2 22 0.00074 33.9 13.2 65 219-293 213-282 (394)
419 3tha_A Tryptophan synthase alp 81.1 4.3 0.00015 36.7 7.6 21 216-237 207-227 (252)
420 1tqj_A Ribulose-phosphate 3-ep 81.1 6.4 0.00022 34.7 8.8 127 132-294 13-142 (230)
421 2fli_A Ribulose-phosphate 3-ep 81.1 3.8 0.00013 35.4 7.2 71 219-294 18-92 (220)
422 1o60_A 2-dehydro-3-deoxyphosph 81.1 16 0.00053 33.7 11.6 40 88-130 76-115 (292)
423 1v5x_A PRA isomerase, phosphor 80.8 11 0.00036 32.8 9.9 72 216-293 7-82 (203)
424 2ze3_A DFA0005; organic waste 80.8 7.1 0.00024 35.7 9.1 80 212-293 18-112 (275)
425 3bw2_A 2-nitropropane dioxygen 80.7 3.9 0.00013 38.8 7.6 60 220-292 112-171 (369)
426 3tji_A Mandelate racemase/muco 80.7 5.7 0.00019 38.5 8.9 145 132-294 152-304 (422)
427 3fkr_A L-2-keto-3-deoxyarabona 80.6 35 0.0012 31.3 20.4 183 72-294 13-219 (309)
428 1ep3_A Dihydroorotate dehydrog 80.5 6.3 0.00022 36.0 8.8 36 201-236 234-269 (311)
429 3tr9_A Dihydropteroate synthas 80.4 6.5 0.00022 36.7 8.8 73 220-294 52-133 (314)
430 3tml_A 2-dehydro-3-deoxyphosph 80.4 7.4 0.00025 35.8 9.1 39 89-130 76-114 (288)
431 2r8w_A AGR_C_1641P; APC7498, d 80.3 37 0.0013 31.5 20.8 179 73-294 40-243 (332)
432 2gjl_A Hypothetical protein PA 80.3 4.7 0.00016 37.4 8.0 59 220-292 86-144 (328)
433 1nsj_A PRAI, phosphoribosyl an 80.2 11 0.00037 32.8 9.8 72 216-293 8-83 (205)
434 1vhn_A Putative flavin oxidore 80.1 8.2 0.00028 35.7 9.5 90 118-236 122-212 (318)
435 3h5d_A DHDPS, dihydrodipicolin 80.1 37 0.0013 31.3 22.4 182 73-297 13-215 (311)
436 1o94_A Tmadh, trimethylamine d 80.1 4.8 0.00016 41.8 8.7 74 219-292 151-256 (729)
437 2hjp_A Phosphonopyruvate hydro 79.8 7.7 0.00026 35.7 9.0 82 211-292 16-109 (290)
438 2v5j_A 2,4-dihydroxyhept-2-ENE 79.8 10 0.00036 34.7 10.0 74 213-293 43-118 (287)
439 3fv9_G Mandelate racemase/muco 79.8 27 0.00091 33.2 13.3 125 132-294 143-274 (386)
440 4dye_A Isomerase; enolase fami 79.7 37 0.0013 32.4 14.3 116 136-295 170-293 (398)
441 3b0p_A TRNA-dihydrouridine syn 79.5 11 0.00037 35.5 10.3 80 136-236 144-224 (350)
442 3i6e_A Muconate cycloisomerase 79.5 17 0.00058 34.5 11.8 65 221-295 210-275 (385)
443 3kts_A Glycerol uptake operon 79.4 30 0.001 29.8 12.4 109 92-239 73-181 (192)
444 3a5f_A Dihydrodipicolinate syn 79.3 37 0.0013 30.8 17.5 175 73-295 8-207 (291)
445 2tps_A Protein (thiamin phosph 79.3 3.7 0.00013 35.6 6.5 65 219-294 33-102 (227)
446 4e4f_A Mannonate dehydratase; 79.1 8.1 0.00028 37.4 9.5 68 216-293 237-309 (426)
447 3hgj_A Chromate reductase; TIM 78.9 26 0.0009 32.7 12.8 90 124-236 221-317 (349)
448 2gou_A Oxidoreductase, FMN-bin 78.7 4.3 0.00015 38.6 7.2 74 220-294 164-271 (365)
449 2qiw_A PEP phosphonomutase; st 78.5 6.4 0.00022 35.6 7.9 81 211-293 21-113 (255)
450 3qz6_A HPCH/HPAI aldolase; str 78.4 5.9 0.0002 35.8 7.7 75 213-294 19-96 (261)
451 4aaj_A N-(5'-phosphoribosyl)an 78.4 14 0.00047 32.7 10.0 72 216-293 27-99 (228)
452 4aaj_A N-(5'-phosphoribosyl)an 78.1 3.3 0.00011 36.8 5.8 61 226-294 142-203 (228)
453 1ujp_A Tryptophan synthase alp 78.0 2.8 9.6E-05 38.2 5.4 21 215-237 209-229 (271)
454 2f6u_A GGGPS, (S)-3-O-geranylg 77.7 2.3 7.9E-05 38.0 4.7 62 218-294 21-85 (234)
455 3tak_A DHDPS, dihydrodipicolin 77.3 42 0.0014 30.4 20.1 180 73-294 7-206 (291)
456 2rfg_A Dihydrodipicolinate syn 77.2 43 0.0015 30.5 18.0 179 73-295 7-206 (297)
457 3b4u_A Dihydrodipicolinate syn 77.1 43 0.0015 30.4 18.3 180 73-295 9-214 (294)
458 1vyr_A Pentaerythritol tetrani 77.1 13 0.00044 35.2 10.0 74 220-294 164-272 (364)
459 3l5l_A Xenobiotic reductase A; 77.0 14 0.00047 35.0 10.2 90 124-236 227-324 (363)
460 3fok_A Uncharacterized protein 77.0 1.5 5.2E-05 40.7 3.3 61 223-297 206-277 (307)
461 2nzl_A Hydroxyacid oxidase 1; 76.9 5.7 0.00019 38.2 7.5 41 250-293 240-280 (392)
462 3ovp_A Ribulose-phosphate 3-ep 76.9 14 0.00048 32.5 9.6 37 200-236 160-196 (228)
463 1viz_A PCRB protein homolog; s 76.9 1.9 6.4E-05 38.8 3.8 65 218-294 21-85 (240)
464 3si9_A DHDPS, dihydrodipicolin 76.7 47 0.0016 30.6 21.8 182 72-294 27-228 (315)
465 3g8r_A Probable spore coat pol 76.4 29 0.00098 32.8 12.0 66 216-291 97-166 (350)
466 2ojp_A DHDPS, dihydrodipicolin 76.4 45 0.0015 30.3 18.8 181 73-295 7-207 (292)
467 2z6i_A Trans-2-enoyl-ACP reduc 76.2 5.3 0.00018 37.2 7.0 59 220-292 78-136 (332)
468 1eye_A DHPS 1, dihydropteroate 76.0 8.9 0.0003 35.1 8.2 73 220-294 32-108 (280)
469 1chr_A Chloromuconate cycloiso 75.9 18 0.00062 34.0 10.7 62 223-294 208-270 (370)
470 3o63_A Probable thiamine-phosp 75.9 33 0.0011 30.5 11.9 27 209-236 192-218 (243)
471 1s2w_A Phosphoenolpyruvate pho 75.8 3.9 0.00013 37.8 5.8 81 211-293 20-114 (295)
472 3fa4_A 2,3-dimethylmalate lyas 75.7 8.6 0.00029 35.6 8.1 82 212-293 20-115 (302)
473 3w01_A Heptaprenylglyceryl pho 75.5 1.8 6.1E-05 38.8 3.3 65 218-294 24-88 (235)
474 3s5s_A Mandelate racemase/muco 75.0 53 0.0018 31.1 13.9 123 133-294 143-272 (389)
475 1p4c_A L(+)-mandelate dehydrog 74.8 3.4 0.00012 39.6 5.3 41 250-293 213-253 (380)
476 3lye_A Oxaloacetate acetyl hyd 74.6 7.3 0.00025 36.2 7.3 83 211-293 26-123 (307)
477 3jte_A Response regulator rece 74.5 26 0.0009 26.8 9.9 72 218-296 34-108 (143)
478 2i1o_A Nicotinate phosphoribos 74.3 8.5 0.00029 37.1 8.0 73 220-297 224-302 (398)
479 3ngj_A Deoxyribose-phosphate a 74.3 4.1 0.00014 36.5 5.3 76 220-295 98-179 (239)
480 4e8g_A Enolase, mandelate race 74.3 45 0.0015 31.7 13.1 122 133-295 163-290 (391)
481 1m3u_A 3-methyl-2-oxobutanoate 74.2 12 0.00043 33.9 8.6 81 211-292 18-113 (264)
482 3bo9_A Putative nitroalkan dio 74.0 7.4 0.00025 36.2 7.3 59 220-292 92-150 (326)
483 2ash_A Queuine tRNA-ribosyltra 73.9 15 0.00052 35.1 9.5 74 221-300 206-282 (381)
484 1ps9_A 2,4-dienoyl-COA reducta 73.9 13 0.00045 37.9 9.8 74 220-293 144-248 (671)
485 1o66_A 3-methyl-2-oxobutanoate 73.8 15 0.0005 33.6 9.0 81 211-292 18-114 (275)
486 1f8m_A Isocitrate lyase, ICL; 73.5 6.2 0.00021 38.4 6.7 79 216-294 71-184 (429)
487 3qw4_B UMP synthase; N-termina 73.5 2.9 0.0001 41.1 4.5 77 228-322 169-252 (453)
488 2r14_A Morphinone reductase; H 73.2 13 0.00045 35.3 9.0 74 220-294 169-276 (377)
489 2dqw_A Dihydropteroate synthas 73.1 8.7 0.0003 35.4 7.4 72 219-292 54-129 (294)
490 1f6y_A 5-methyltetrahydrofolat 72.8 13 0.00043 33.6 8.4 65 220-291 28-96 (262)
491 2vp8_A Dihydropteroate synthas 72.8 9.6 0.00033 35.6 7.7 71 220-293 68-144 (318)
492 3oix_A Putative dihydroorotate 72.3 9.9 0.00034 35.9 7.8 28 209-236 276-303 (345)
493 3eol_A Isocitrate lyase; seatt 72.2 4.9 0.00017 39.2 5.6 83 212-294 63-181 (433)
494 1o5k_A DHDPS, dihydrodipicolin 72.0 60 0.002 29.7 20.5 179 73-295 19-222 (306)
495 4hb7_A Dihydropteroate synthas 71.9 15 0.00052 33.4 8.6 70 220-291 33-106 (270)
496 3bld_A Queuine tRNA-ribosyltra 71.5 12 0.00042 35.8 8.3 72 221-298 213-287 (386)
497 1geq_A Tryptophan synthase alp 71.4 1.7 5.9E-05 38.5 2.2 42 251-294 69-116 (248)
498 1dxe_A 2-dehydro-3-deoxy-galac 71.4 21 0.0007 31.9 9.4 73 213-293 23-98 (256)
499 1izc_A Macrophomate synthase i 71.3 17 0.00057 34.2 9.1 72 213-292 46-123 (339)
500 4a35_A Mitochondrial enolase s 71.0 63 0.0021 31.3 13.5 120 134-293 201-329 (441)
No 1
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=100.00 E-value=6.7e-77 Score=573.20 Aligned_cols=337 Identities=44% Similarity=0.685 Sum_probs=305.4
Q ss_pred CCChHHHHHHHHHhCCccccccccCCccchHHHHHhHhhcccceeeccccCCCCCCccceeEcCeeeccceEeccccccc
Q 018519 4 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQK 83 (354)
Q Consensus 4 ~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~N~~~~~~i~l~pr~l~~~~~vd~st~l~g~~l~~Pi~iAPm~~~~ 83 (354)
++|++|||+.||++||+++|+|++||++||.|+++|+.+|++|+|+||+|++++++||+|+|||+++++||++||+++++
T Consensus 2 ~~~~~d~~~~A~~~lp~~~~~Y~~~ga~~e~t~~~N~~af~~~~l~prvl~dv~~~d~~t~llG~~~~~P~~iaP~g~~~ 81 (352)
T 3sgz_A 2 LVCLADFKAHAQKQLSKTSWDFIEGEADDGITYSENIAAFKRIRLRPRYLRDMSKVDTRTTIQGQEISAPICISPTAFHS 81 (352)
T ss_dssp CCSHHHHHHHHHHTSCHHHHHHHHCCCTTCHHHHHHHHHHHTCCBCCCCSSCCSSCBCCEEETTEEESSSEEECCCSCGG
T ss_pred CCCHHHHHHHHHHHCCHHHHHHHhcCCcchHHHHHHHHHHHhceeeccccCCCCCCCCceEECCcccCCcceechHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCChhhHHHHHHHHHcCCcEEecCCCCCCHHHHHhhCC-CceEEEEeecCChHHHHHHHHHHHHcCCCEEEEecCCCCC
Q 018519 84 MAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRL 162 (354)
Q Consensus 84 l~~~~~e~~la~aa~~~G~~~~~s~~~~~~~eei~~~~~-~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~ 162 (354)
+.||+||.++|++|+++|+++++|+++++++|||+++.+ ++.|||||+++|++.+.++++||+++||++|++|+|.|+.
T Consensus 82 l~~~~ge~~~araa~~~gi~~~lSt~ss~s~e~v~~~~~~~~~wfQlY~~~d~~~~~~l~~ra~~aG~~alvlTvD~p~~ 161 (352)
T 3sgz_A 82 IAWPDGEKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVL 161 (352)
T ss_dssp GTCTTHHHHHHHHHHHHTCEEEECTTCSSCHHHHHHHSTTCEEEEECCCCSCHHHHHHHHHHHHHTTCCCEEEECSCSSC
T ss_pred hcCccHHHHHHHHHHHcCCCeEeCCCCCCCHHHHHHhccCccceeccccCCCHHHHHHHHHHHHHcCCCEEEEEeCCCCC
Confidence 999999999999999999999999999999999999887 7899999999999999999999999999999999999999
Q ss_pred CchhHHhhhccCCCCcCccccccCCcc---------CcCcccchh-hHHHHHhhhcCCcccccccCCHHHHHHHHHhCCC
Q 018519 163 GRREADIKNRFTLPPFLTLKNFQGLDL---------GKMDEANDS-GLAAYVAGQIDRSLSWKGVLTAEDARIAVQAGAA 232 (354)
Q Consensus 163 g~r~~~~r~~~~~p~~~~~~~~~~~~~---------~~~~~~~~~-~~~~~~~~~~~~~~~w~Gi~~~~~a~~~~~~G~d 232 (354)
|+|++|+|++|.+|..++.+++.+... ...+..... .++.+.+. ...++..|+++++++|+.+.++|+|
T Consensus 162 g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~w~~i~~lr~~-~~~PvivK~v~~~e~A~~a~~~GaD 240 (352)
T 3sgz_A 162 GNRRRDKRNQLNLEANILKAALRALKEEKPTQSVPVLFPKASFCWNDLSLLQSI-TRLPIILKGILTKEDAELAMKHNVQ 240 (352)
T ss_dssp CCCHHHHHHHHHSCHHHHTTCC---------------CCCTTCCHHHHHHHHHH-CCSCEEEEEECSHHHHHHHHHTTCS
T ss_pred CcchhhhhcCCCCCcccchhhhcccccccccchhhhhccCCCCCHHHHHHHHHh-cCCCEEEEecCcHHHHHHHHHcCCC
Confidence 999999999998887666555432110 000111111 23333333 3445566789999999999999999
Q ss_pred EEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHHHHHhhcCHHHHHHHH
Q 018519 233 GIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVL 312 (354)
Q Consensus 233 ~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l~~~~~~G~~gv~~~l 312 (354)
+|+|+||||+|+++++++++.|+++++++++++|||++|||+++.|++|+|++|||+|++||||+|++++.|++|+.+++
T Consensus 241 ~I~vsn~GG~~~d~~~~~~~~L~~i~~av~~~ipVia~GGI~~g~Dv~kaLalGA~aV~iGr~~l~~l~~~G~~gv~~~l 320 (352)
T 3sgz_A 241 GIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLGRPILWGLACKGEDGVKEVL 320 (352)
T ss_dssp EEEECCGGGTSSCSSCCHHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCccCCCccHHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhcCcHHHHHHH
Confidence 99999999999999999999999999998778999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCChhhhcccceee
Q 018519 313 EMLREEFELAMALSGCRSLKEITRDHIVT 341 (354)
Q Consensus 313 ~~l~~el~~~m~~~G~~~i~~l~~~~l~~ 341 (354)
+.+++||+.+|.++|+++++||+++.++.
T Consensus 321 ~~l~~el~~~m~~~G~~~i~el~~~~~~y 349 (352)
T 3sgz_A 321 DILTAELHRCMTLSGCQSVAEISPDLIQF 349 (352)
T ss_dssp HHHHHHHHHHHHHHTCSBGGGCCGGGBSS
T ss_pred HHHHHHHHHHHHHhCCCcHHHHhhhcchh
Confidence 99999999999999999999999998863
No 2
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=100.00 E-value=3.3e-70 Score=536.99 Aligned_cols=339 Identities=54% Similarity=0.853 Sum_probs=300.9
Q ss_pred CCCChHHHHHHHHHhCCccccccccCCccchHHHHHhHhhcccceeeccccCCCCCCccceeEcCeeeccceEecccccc
Q 018519 3 EITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQ 82 (354)
Q Consensus 3 ~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~N~~~~~~i~l~pr~l~~~~~vd~st~l~g~~l~~Pi~iAPm~~~ 82 (354)
.++|++|||+.||++||+.+|+|++||++||.|+++|+.+|++|+|+||+|++++++||+|+|+|++++.||++|||+++
T Consensus 26 ~~~~~~d~~~~A~~~lp~~~~~y~~~ga~~e~t~~~N~~~f~~i~l~pr~L~~~~~~d~st~i~G~~l~~Pi~iAPmg~~ 105 (392)
T 2nzl_A 26 RLICINDYEQHAKSVLPKSIYDYYRSGANDEETLADNIAAFSRWKLYPRMLRNVAETDLSTSVLGQRVSMPICVGATAMQ 105 (392)
T ss_dssp CCCSHHHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHHHHHSCBCCCCSSCCTTCBCCEEETTEEESSSEEECCCSCG
T ss_pred cCCCHHHHHHHHHhhCCHHHHhhcCCCCCccHHHHHHHHhhheEEeehhhccCCcCCCcceEECCEecCCceEecccccc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCChhhHHHHHHHHHcCCcEEecCCCCCCHHHHHhhCC-CceEEEEeecCChHHHHHHHHHHHHcCCCEEEEecCCCC
Q 018519 83 KMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPR 161 (354)
Q Consensus 83 ~l~~~~~e~~la~aa~~~G~~~~~s~~~~~~~eei~~~~~-~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~ 161 (354)
.+.||++|.++|++|+++|+++++|++++.++|++.+..+ ++.|||||.++|++.+.+++++++++|++++++|+|||+
T Consensus 106 ~l~~~~~e~~laraA~~~G~~~~~s~~~s~~le~v~~~~~~~~~~~QLy~~~d~~~~~~~~~ra~~~G~~al~itvd~p~ 185 (392)
T 2nzl_A 106 RMAHVDGELATVRACQSLGTGMMLSSWATSSIEEVAEAGPEALRWLQLYIYKDREVTKKLVRQAEKMGYKAIFVTVDTPY 185 (392)
T ss_dssp GGTSTTHHHHHHHHHHHHTCEEEECTTCSSCHHHHHHHCTTSEEEEEECCBSSHHHHHHHHHHHHHTTCCCEEEECSCSS
T ss_pred ccccchHHHHHHHHHHHcCCCeeccchHHHHHHHHHHhcCCCcEEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 9999999999999999999999999999899999987754 789999999999999999999999999999999999999
Q ss_pred CCchhHHhhhccCCCCcCccccccCCcc--------C-cC----------ccc-chhhHHHHHhhhcCCcccccccCCHH
Q 018519 162 LGRREADIKNRFTLPPFLTLKNFQGLDL--------G-KM----------DEA-NDSGLAAYVAGQIDRSLSWKGVLTAE 221 (354)
Q Consensus 162 ~g~r~~~~r~~~~~p~~~~~~~~~~~~~--------~-~~----------~~~-~~~~~~~~~~~~~~~~~~w~Gi~~~~ 221 (354)
.|+|++|+|+++.+|..++.+++..... . .. +.. ....++.+.+.. ..++..+|+.+++
T Consensus 186 ~g~R~~d~r~~~~lp~~~~~~n~~~~~~~~~p~~~~~~g~~~~~~~~~~~d~~~~~~~i~~lr~~~-~~PvivKgv~~~e 264 (392)
T 2nzl_A 186 LGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDSGLAAYVAKAIDPSISWEDIKWLRRLT-SLPIVAKGILRGD 264 (392)
T ss_dssp CCCCHHHHHHTCCCCTTCCCTTC-----------------CHHHHHHHHBCTTCCHHHHHHHC--C-CSCEEEEEECCHH
T ss_pred ccchhHhHhhccCCccccchhhhhhhhcccCccccccCcchHHHHHhhcCChHHHHHHHHHHHHhh-CCCEEEEecCCHH
Confidence 9999999999998887665444321000 0 00 000 111133333222 3345556889999
Q ss_pred HHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHHHHHh
Q 018519 222 DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLA 301 (354)
Q Consensus 222 ~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l~~~~ 301 (354)
+|+.+.++|+|+|+|+||||+|.++++++++.|+++++++++++|||++|||+++.|++|+|++|||+|++||||++++.
T Consensus 265 ~A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av~~~ipVia~GGI~~g~Dv~kalalGAd~V~iGr~~l~~~~ 344 (392)
T 2nzl_A 265 DAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIVWGLA 344 (392)
T ss_dssp HHHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHHTTSSEEEECSSCCSHHHHHHHHHTTCSEEEECHHHHHHHH
T ss_pred HHHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHcCCCCEEEEECCCCCHHHHHHHHHhCCCeeEECHHHHHHHH
Confidence 99999999999999999999999999999999999999987789999999999999999999999999999999999999
Q ss_pred hcCHHHHHHHHHHHHHHHHHHHHHhCCCChhhhcccceeec
Q 018519 302 AEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTE 342 (354)
Q Consensus 302 ~~G~~gv~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l~~~ 342 (354)
+.|++|++++++.+.+||+.+|.++|+++++||++..|+..
T Consensus 345 ~~g~~gv~~~l~~l~~el~~~m~~~G~~~i~el~~~~l~~~ 385 (392)
T 2nzl_A 345 FQGEKGVQDVLEILKEEFRLAMALSGCQNVKVIDKTLVRKN 385 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCSBGGGCCGGGBC--
T ss_pred hcChHHHHHHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhC
Confidence 99999999999999999999999999999999999988654
No 3
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=100.00 E-value=1.3e-69 Score=529.30 Aligned_cols=339 Identities=34% Similarity=0.557 Sum_probs=291.8
Q ss_pred CCCCChHHHHHHHHHhCCccccccccCCccchHHHHHhHhhcccceeeccccCCCCCCccceeEcCeeeccceEeccccc
Q 018519 2 GEITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAM 81 (354)
Q Consensus 2 ~~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~N~~~~~~i~l~pr~l~~~~~vd~st~l~g~~l~~Pi~iAPm~~ 81 (354)
..++|++|||+.||++||+.+|+|++||++||.|+++|+.+|++|+|+||+|++++++||+|+|+|++++.||++|||++
T Consensus 11 ~~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~N~~~f~~i~l~pr~L~~~~~~d~st~i~G~~l~~Pi~iAPma~ 90 (368)
T 2nli_A 11 IDVVNTYDLEEEASKVVPHGGFNYIAGASGDEWTKRANDRAWKHKLLYPRLAQDVEAPDTSTEILGHKIKAPFIMAPIAA 90 (368)
T ss_dssp CCCSCSHHHHHHHHTTSCHHHHHHHHCCSBTSHHHHHHHHGGGGEEECCCCCCCCSCCCCCEEETTEEESSSEEECCCSC
T ss_pred ccCCCHHHHHHHHHHhCCHHHHhhcccCCCccHHHHHHHHHHhheeeeccccCCCccCCcceEECCEecCCceeecchhh
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCChhhHHHHHHHHHcCCcEEecCCCCCCHHHHHhhCC-CceEEEEeecCChHHHHHHHHHHHHcCCCEEEEecCCC
Q 018519 82 QKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTP 160 (354)
Q Consensus 82 ~~l~~~~~e~~la~aa~~~G~~~~~s~~~~~~~eei~~~~~-~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~i~vd~p 160 (354)
+++.||++|.++|++|+++|+++++|++++.++|++.+..+ .+.|||||.++|++.+.+++++++++|+++|+||+|||
T Consensus 91 ~g~~~~~~e~~la~aa~~~G~~~~~s~~~s~~le~v~~~~~~~~~~~QLy~~~d~~~~~~~~~ra~~aG~~ai~it~d~p 170 (368)
T 2nli_A 91 HGLAHTTKEAGTARAVSEFGTIMSISAYSGATFEEISEGLNGGPRWFQIYMAKDDQQNRDILDEAKSDGATAIILTADST 170 (368)
T ss_dssp GGGTCTTHHHHHHHHHHHHTCCEEECTTCSSCHHHHHHHHTTCCEEEEECCBSSHHHHHHHHHHHHHTTCSCEEEESBCC
T ss_pred ccCCCcHHHHHHHHHHHHcCCCEEeechHhHHHHHHHHhCCCCCEEEEEeccCCHHHHHHHHHHHHHCCCCEEEEcCCCC
Confidence 99999999999999999999999999999889999987644 78999999999999999999999999999999999999
Q ss_pred CCCchhHHhhhccCCCCcCcccccc----------CC--ccCcCccc-chhhHHHHHhhhcCCcccccccCCHHHHHHHH
Q 018519 161 RLGRREADIKNRFTLPPFLTLKNFQ----------GL--DLGKMDEA-NDSGLAAYVAGQIDRSLSWKGVLTAEDARIAV 227 (354)
Q Consensus 161 ~~g~r~~~~r~~~~~p~~~~~~~~~----------~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~w~Gi~~~~~a~~~~ 227 (354)
+.|+|++|+++++.+| ++.+++. .+ .....+.. ....++.+.+.. ..++..+|++++++|+.+.
T Consensus 171 ~~g~r~~d~~~~~~~p--~~~~~~~~~~~~~~~g~~l~~~~~~~d~~~~~~~i~~lr~~~-~~PvivK~v~~~e~a~~a~ 247 (368)
T 2nli_A 171 VSGNRDRDVKNKFVYP--FGMPIVQRYLRGTAEGMSLNNIYGASKQKISPRDIEEIAGHS-GLPVFVKGIQHPEDADMAI 247 (368)
T ss_dssp ---CBC--------CC--SCCHHHHHHHTTSGGGC-----CTTBCSBCCHHHHHHHHHHS-SSCEEEEEECSHHHHHHHH
T ss_pred cccchhHHHhhcccCc--chhhhhhcccccCCCCchHHhhhhccCchhhHHHHHHHHHHc-CCCEEEEcCCCHHHHHHHH
Confidence 9999999999998767 2212221 00 00000111 122244444433 4456667899999999999
Q ss_pred HhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHHHHHhhcCHHH
Q 018519 228 QAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKG 307 (354)
Q Consensus 228 ~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l~~~~~~G~~g 307 (354)
++|+|+|+|+||||+|+++++++++.|+++++++++++|||++|||+++.|++|+|++|||+|+|||||++++++.|++|
T Consensus 248 ~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~~~ipVia~GGI~~g~D~~kalalGAd~V~iGr~~l~~~~~~G~~g 327 (368)
T 2nli_A 248 KRGASGIWVSNHGARQLYEAPGSFDTLPAIAERVNKRVPIVFDSGVRRGEHVAKALASGADVVALGRPVLFGLALGGWQG 327 (368)
T ss_dssp HTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHHTTSSCEEECSSCCSHHHHHHHHHTTCSEEEECHHHHHHHHHHHHHH
T ss_pred HcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhcChHH
Confidence 99999999999999999999999999999999987789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCChhhhcccceeecc
Q 018519 308 VRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEW 343 (354)
Q Consensus 308 v~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l~~~~ 343 (354)
++++++.+++||+.+|.++|++++++|++..++...
T Consensus 328 v~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l~~~~ 363 (368)
T 2nli_A 328 AYSVLDYFQKDLTRVMQLTGSQNVEDLKGLDLFDNP 363 (368)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSSHHHHHTCCEEECT
T ss_pred HHHHHHHHHHHHHHHHHHhCCcCHHHhccccEeecc
Confidence 999999999999999999999999999999987654
No 4
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=100.00 E-value=6.7e-68 Score=518.23 Aligned_cols=351 Identities=83% Similarity=1.227 Sum_probs=307.2
Q ss_pred CCCChHHHHHHHHHhCCccccccccCCccchHHHHHhHhhcccceeeccccCCCCCCccceeEcCeeeccceEecccccc
Q 018519 3 EITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQ 82 (354)
Q Consensus 3 ~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~N~~~~~~i~l~pr~l~~~~~vd~st~l~g~~l~~Pi~iAPm~~~ 82 (354)
+++|++|||+.||++||+.+|+|++||++||.|+++|+.+|++|+|+||+|++++++||+|+|+|++++.||++|||+++
T Consensus 3 ~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~N~~~f~~i~l~pr~l~~~~~~d~~t~i~G~~~~~Pi~iAPmg~~ 82 (370)
T 1gox_A 3 EITNVNEYEAIAKQKLPKMVYDYYASGAEDQWTLAENRNAFSRILFRPRILIDVTNIDMTTTILGFKISMPIMIAPTAMQ 82 (370)
T ss_dssp CCCSTTHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHGGGGEEECCCCSCCCSCCBCCEEETTEEESSSEEECCCSCG
T ss_pred cCCCHHHHHHHHHHhCCHHHHhhhCCCCCccHHHHHHHHHHhhheeeccccCCCCCCCCceEECCcccCCceeEcccchh
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCChhhHHHHHHHHHcCCcEEecCCCCCCHHHHHhhCCCceEEEEeecCChHHHHHHHHHHHHcCCCEEEEecCCCCC
Q 018519 83 KMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRL 162 (354)
Q Consensus 83 ~l~~~~~e~~la~aa~~~G~~~~~s~~~~~~~eei~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~ 162 (354)
.+.||++|.++|++|+++|+++++|++++.++|++.+..+++.|||||.+.|++.+.+.+++++++|+++|+||+|||+.
T Consensus 83 ~l~~~~~e~a~a~aa~~~G~~~~~s~~~~~~ieev~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~it~d~p~~ 162 (370)
T 1gox_A 83 KMAHPEGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRL 162 (370)
T ss_dssp GGTCTTHHHHHHHHHHHTTCCEEECTTCSSCHHHHHTTCCCCEEEEECCBSSHHHHHHHHHHHHHTTCCEEEEECSCSSC
T ss_pred hhccchHHHHHHHHHHHcCCCeeccCCCCCCHHHHHhhcCCCceEEEecCCCchHHHHHHHHHHHCCCCEEEEeCCCCcc
Confidence 99999999999999999999999999999999999987778899999999999999999999999999999999999999
Q ss_pred CchhHHhhhccCCCCcCccccccCCc-------cC---------cCccc-chhhHHHHHhhhcCCcccccccCCHHHHHH
Q 018519 163 GRREADIKNRFTLPPFLTLKNFQGLD-------LG---------KMDEA-NDSGLAAYVAGQIDRSLSWKGVLTAEDARI 225 (354)
Q Consensus 163 g~r~~~~r~~~~~p~~~~~~~~~~~~-------~~---------~~~~~-~~~~~~~~~~~~~~~~~~w~Gi~~~~~a~~ 225 (354)
|+|++++|+++.+|...+.+++.... .. ..+.. ....+.++.+.. ..++..+++.++++++.
T Consensus 163 g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~~~~~i~~l~~~~-~~pv~vK~~~~~e~a~~ 241 (370)
T 1gox_A 163 GRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSYVAGQIDRSLSWKDVAWLQTIT-SLPILVKGVITAEDARL 241 (370)
T ss_dssp CCCHHHHHTTCCCCTTCCCGGGSSSCCC---------HHHHHHHTBCTTCCHHHHHHHHHHC-CSCEEEECCCSHHHHHH
T ss_pred cccHHHHHhccCCCcccchhhhhhhhhhccccccCccHHHHHHhhcCccchHHHHHHHHHHh-CCCEEEEecCCHHHHHH
Confidence 99999999999878766554443210 00 00001 112244444433 33444568899999999
Q ss_pred HHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHHHHHhhcCH
Q 018519 226 AVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGE 305 (354)
Q Consensus 226 ~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l~~~~~~G~ 305 (354)
+.++|+|+|+|+||||+++++++++++.|.++++.+++++|||++|||+++.|++|++++|||+|++||||++++++.|+
T Consensus 242 a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~~~ipvia~GGI~~~~D~~k~l~~GAdaV~iGr~~l~~~~~~G~ 321 (370)
T 1gox_A 242 AVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFSLAAEGE 321 (370)
T ss_dssp HHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTTSSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHHHHHHH
T ss_pred HHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHHHcCCCEEeecHHHHHHHhhccH
Confidence 99999999999999999999999999999999999877899999999999999999999999999999999999988899
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCChhhhcccceeeccCCCCCCCCCCC
Q 018519 306 KGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDASLPRPVPRL 354 (354)
Q Consensus 306 ~gv~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l~~~~~~~~~~~~~~~ 354 (354)
+|+.++++.+.+||+.+|.++|+++++|++++.+....+..++.+|.+|
T Consensus 322 ~gv~~~~~~l~~el~~~m~~~G~~~i~el~~~~l~~~~~~~~~~~~~~~ 370 (370)
T 1gox_A 322 AGVKKVLQMMRDEFELTMALSGCRSLKEISRSHIAADWDGPSSRAVARL 370 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCSBTTTCCGGGEEETTC----------
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCHHHhhhcceeccccccccchhhcC
Confidence 9999999999999999999999999999999999988888888887765
No 5
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=100.00 E-value=6.6e-66 Score=521.65 Aligned_cols=341 Identities=38% Similarity=0.628 Sum_probs=299.9
Q ss_pred CCCChHHHHHHHHHhCCccccccccCCccchHHHHHhHhhcccceeeccccCCCCCCccceeEcCeeeccceEecccccc
Q 018519 3 EITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQ 82 (354)
Q Consensus 3 ~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~N~~~~~~i~l~pr~l~~~~~vd~st~l~g~~l~~Pi~iAPm~~~ 82 (354)
.++|++|||+.||++||+.+|+|+.||++||.|+++|+.+|++|+|+||+|++++++||+|+|+|+++++||+||||+++
T Consensus 121 ~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~e~t~~~N~~af~~i~l~pr~L~dv~~~d~st~i~G~~l~~Pi~iAPma~~ 200 (511)
T 1kbi_A 121 NIINLYDFEYLASQTLTKQAWAYYSSGANDEVTHRENHNAYHRIFFKPKILVDVRKVDISTDMLGSHVDVPFYVSATALC 200 (511)
T ss_dssp GCCSHHHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHGGGGCEECCCCSCCCSSCBCCEEETTEEESSSEEECCCSCG
T ss_pred ccCCHHHHHHHHHhhCCHHHhhhccCCCCchhHHHHHHHHhhhhccccccccCcccccCccccCCccCCCCeEeccchhc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCC-hhhHHHHHHHHH--cCCcEEecCCCCCCHHHHHhhC---CCceEEEEeecCChHHHHHHHHHHHHcCCCEEEEe
Q 018519 83 KMAHP-EGEYATARAASA--AGTIMTLSSWSTSSVEEVASTG---PGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALT 156 (354)
Q Consensus 83 ~l~~~-~~e~~la~aa~~--~G~~~~~s~~~~~~~eei~~~~---~~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~i~ 156 (354)
++.|| ++|.++|++|++ +|+++++|++++.++|++.+.. ..+.|||||.+.|++.+.+++++++++|+++|+||
T Consensus 201 ~l~~~~~~e~alaraA~~~~~G~~~~~s~~a~~s~e~v~~~~~~~~~~~~~QLy~~~d~~~~~~~~~rae~aG~~al~it 280 (511)
T 1kbi_A 201 KLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEEIIEAAPSDKQIQWYQLYVNSDRKITDDLVKNVEKLGVKALFVT 280 (511)
T ss_dssp GGTCTTTTHHHHHHHHHSSSSCCCEEECTTCSSCHHHHHHTCCCSSCCEEEEECCCSSHHHHHHHHHHHHHHTCSCEEEE
T ss_pred cccChhhHHHHHHHHHHHhCCCeeEEeCCcccCCHHHHHhhcCCCCCCeEEEEeecCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 99999 999999999999 9999999999899999998765 27899999988999999999999999999999999
Q ss_pred cCCCCCCchhHHhhhccCCCCcCcccc--------ccCC---ccCcCccc-chhhHHHHHhhhcCCcccccccCCHHHHH
Q 018519 157 VDTPRLGRREADIKNRFTLPPFLTLKN--------FQGL---DLGKMDEA-NDSGLAAYVAGQIDRSLSWKGVLTAEDAR 224 (354)
Q Consensus 157 vd~p~~g~r~~~~r~~~~~p~~~~~~~--------~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~w~Gi~~~~~a~ 224 (354)
+|||+.|+|++++|++|..|... ... ..++ .....+.. ....+..+.+.. ..++..+|+.++++|+
T Consensus 281 vd~p~~g~R~~~~r~g~~~p~~~-~~~~~g~~~~~~~g~~~~~~~~~d~~~~~~~i~~lr~~~-~~PvivKgv~~~e~A~ 358 (511)
T 1kbi_A 281 VDAPSLGQREKDMKLKFSNTKAG-PKAMKKTNVEESQGASRALSKFIDPSLTWKDIEELKKKT-KLPIVIKGVQRTEDVI 358 (511)
T ss_dssp CSCSSCCCCHHHHHHHHTTCC--------CCCCSSCCCGGGGCBTTBCTTCCHHHHHHHHHHC-SSCEEEEEECSHHHHH
T ss_pred CCCCCccccHHHHhccCCCCccc-ccccccccccccccHHHHHhhccChHhHHHHHHHHHHHh-CCcEEEEeCCCHHHHH
Confidence 99999999999999998766311 000 0000 00000011 112244444433 4456667888999999
Q ss_pred HHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHh-----cCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHHHH
Q 018519 225 IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAT-----QGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYS 299 (354)
Q Consensus 225 ~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~-----~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l~~ 299 (354)
.+.++|+|+|+|+||||+|++.++++++.|+++++++ .+++|||++|||+++.|++|+|++|||+|+|||||+|+
T Consensus 359 ~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~~~~~~~~ipVia~GGI~~g~Dv~kaLalGAdaV~iGr~~l~~ 438 (511)
T 1kbi_A 359 KAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVDGGVRRGTDVLKALCLGAKGVGLGRPFLYA 438 (511)
T ss_dssp HHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHH
T ss_pred HHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHHHhhccCCCcEEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHH
Confidence 9999999999999999999999999999999999988 35899999999999999999999999999999999999
Q ss_pred HhhcCHHHHHHHHHHHHHHHHHHHHHhCCCChhhhcccceeeccCC
Q 018519 300 LAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDA 345 (354)
Q Consensus 300 ~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l~~~~~~ 345 (354)
+.+.|++|+.++++.+++||+.+|.++|++++++|+++.+......
T Consensus 439 ~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~i~el~~~~l~~~~~~ 484 (511)
T 1kbi_A 439 NSCYGRNGVEKAIEILRDEIEMSMRLLGVTSIAELKPDLLDLSTLK 484 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBGGGCCGGGEECTTTT
T ss_pred HHhcChHHHHHHHHHHHHHHHHHHHHhCCCcHHHHhHHHhhhhhhh
Confidence 9989999999999999999999999999999999999988766543
No 6
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=100.00 E-value=1.1e-64 Score=496.69 Aligned_cols=338 Identities=41% Similarity=0.682 Sum_probs=298.1
Q ss_pred CCCChHHHHHHHHHhCCccccccccCCccchHHHHHhHhhcccceeeccccCCCCCCccceeEcCeeeccceEecccccc
Q 018519 3 EITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQ 82 (354)
Q Consensus 3 ~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~N~~~~~~i~l~pr~l~~~~~vd~st~l~g~~l~~Pi~iAPm~~~ 82 (354)
+++|++|||+.||++||+.+|+||+||++||.|+++|+.+|++|+|+||+|++++++||+|+|+|++++.||++|||+++
T Consensus 4 ~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~n~~~f~~i~l~pr~L~~~~~~d~st~i~G~~l~~Pv~iap~~~~ 83 (380)
T 1p4c_A 4 NLFNVEDYRKLAQKRLPKMVYDYLEGGAEDEYGVKHNRDVFQQWRFKPKRLVDVSRRSLQAEVLGKRQSMPLLIGPTGLN 83 (380)
T ss_dssp CCSSHHHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHGGGGEEECCCCSCCCSSCBCCEEETTEEESSSEEECCCSCG
T ss_pred cCCCHHHHHHHHHHhCCHHHHHHhCCCCCccHHHHHHHHHHhheeeeccccCCCccCcceeEECCeecCCceEecCcccc
Confidence 56799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCChhhHHHHHHHHHcCCcEEecCCCCCCHHHHHhhCCCceEEEEeecCChHHHHHHHHHHHHcCCCEEEEecCCCCC
Q 018519 83 KMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRL 162 (354)
Q Consensus 83 ~l~~~~~e~~la~aa~~~G~~~~~s~~~~~~~eei~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~ 162 (354)
++.||++|.++|++|+++|+++++|+.+++++|++.+...++.|||||.+. ++...+.+++++++|+++++||+|.|+.
T Consensus 84 ~~~~~~~~~~~a~aa~~~G~~~~vss~s~~~le~i~~~~~~~~~fQly~~~-~~~~~~~i~~a~~aG~~al~vTvd~p~~ 162 (380)
T 1p4c_A 84 GALWPKGDLALARAATKAGIPFVLSTASNMSIEDLARQCDGDLWFQLYVIH-REIAQGMVLKALHTGYTTLVLTTDVAVN 162 (380)
T ss_dssp GGTSTTHHHHHHHHHHHHTCCEEECTTCSSCHHHHHHHCCSCEEEEECCSS-HHHHHHHHHHHHHTTCCEEEEECSCSSC
T ss_pred ccCCCcHHHHHHHHHHHcCCCeecCccccCCHHHHHhccCCCeEEEEEech-HHHHHHHHHHHHHcCCCEEEEeecCccc
Confidence 999999999999999999999999999889999998764578999999887 8999999999999999999999999999
Q ss_pred CchhHHhhhccCCCCcCccccc-----cCCccC-----------cCccc-chhhHHHHHhhhcCCcccccccCCHHHHHH
Q 018519 163 GRREADIKNRFTLPPFLTLKNF-----QGLDLG-----------KMDEA-NDSGLAAYVAGQIDRSLSWKGVLTAEDARI 225 (354)
Q Consensus 163 g~r~~~~r~~~~~p~~~~~~~~-----~~~~~~-----------~~~~~-~~~~~~~~~~~~~~~~~~w~Gi~~~~~a~~ 225 (354)
|+|++|+++++..|..++..++ ..+... ..+.. ....++.+.+.. ..++..+|+.++++|+.
T Consensus 163 g~r~~d~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~ala~~~~~~~~p~~~~~~i~~i~~~~-~~Pv~vkgv~t~e~a~~ 241 (380)
T 1p4c_A 163 GYRERDLHNRFKIPPFLTLKNFEGIDLGKMDKANLEMQAALMSRQMDASFNWEALRWLRDLW-PHKLLVKGLLSAEDADR 241 (380)
T ss_dssp CCCHHHHHHTCCCCTTCCCGGGTTCCCSCCSSTTTTTHHHHTSSCCCTTCCHHHHHHHHHHC-CSEEEEEEECCHHHHHH
T ss_pred cchhHHHhcCCCCccccCHHHhhhhhhhccCcccchHHHHHHHhhcCccccHHHHHHHHHhc-CCCEEEEecCcHHHHHH
Confidence 9999999999876654443322 111000 00111 112234444443 33444468999999999
Q ss_pred HHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHHHHHhhcCH
Q 018519 226 AVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGE 305 (354)
Q Consensus 226 ~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l~~~~~~G~ 305 (354)
+.++|+|+|+|+||||+|+++++++++.++++++.+ ++|||++|||+++.|++|+|++|||+|++||++++++.+.|+
T Consensus 242 a~~aGad~I~vs~~gg~~~d~~~~~~~~l~~v~~~~--~~pVia~GGI~~~~dv~kal~~GAdaV~iGr~~l~~~~~~g~ 319 (380)
T 1p4c_A 242 CIAEGADGVILSNHGGRQLDCAISPMEVLAQSVAKT--GKPVLIDSGFRRGSDIVKALALGAEAVLLGRATLYGLAARGE 319 (380)
T ss_dssp HHHTTCSEEEECCGGGTSCTTCCCGGGTHHHHHHHH--CSCEEECSSCCSHHHHHHHHHTTCSCEEESHHHHHHHHHHHH
T ss_pred HHHcCCCEEEEcCCCCCcCCCCcCHHHHHHHHHHHc--CCeEEEECCCCCHHHHHHHHHhCCcHhhehHHHHHHHHhcCH
Confidence 999999999999999999999999999999999988 569999999999999999999999999999999999888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCChhhhcccceeeccC
Q 018519 306 KGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWD 344 (354)
Q Consensus 306 ~gv~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l~~~~~ 344 (354)
+++.++++.+.+||+.+|.++|+.++++++++.++..+.
T Consensus 320 ~~v~~~~~~l~~el~~~m~~~G~~~i~el~~~~l~~~g~ 358 (380)
T 1p4c_A 320 TGVDEVLTLLKADIDRTLAQIGCPDITSLSPDYLQNEGV 358 (380)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCBGGGCCGGGEEEC--
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCHHHhccCeEEeccc
Confidence 999999999999999999999999999999999887654
No 7
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=100.00 E-value=8.6e-42 Score=331.29 Aligned_cols=276 Identities=18% Similarity=0.271 Sum_probs=207.6
Q ss_pred hhcccceeecccc--CCCCCCccceeEcCeeeccceEecccccccccCChhhHHHHHHHHHcCCcEEecCCCCCCHHH--
Q 018519 41 NAFSRILFRPRIL--IDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEE-- 116 (354)
Q Consensus 41 ~~~~~i~l~pr~l--~~~~~vd~st~l~g~~l~~Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~s~~~~~~~ee-- 116 (354)
..||+|+|+|+.| .++++|||+|+|+|++++.||+++||++++..+++.+.++|++|+++|++|++|+++.. +|+
T Consensus 54 ~~fd~i~l~~~~lP~~~~~~vd~st~i~g~~l~~Pi~iapMtgg~~~~~~in~~lA~~a~~~G~~~~vGs~~~~-le~~~ 132 (365)
T 3sr7_A 54 NSFDDIELIHHSLPDYDLAEIDLSTHFAGQDFDFPFYINAMTGGSQKGKEVNEKLAQVADTCGLLFVTGSYSTA-LKNPD 132 (365)
T ss_dssp CGGGGEEECCCSSCCSCGGGCCCCEEETTEEESSSEEEECC----CCCHHHHHHHHHHHHHHTCCEEC------------
T ss_pred CCcceEEEECCCCCcCCcccccceEEECCEEccCceEeccccCCCcchhHHHHHHHHHHHHcCCCeeccccccc-ccCcc
Confidence 5899999999999 57899999999999999999999999999988889999999999999999999998642 222
Q ss_pred -----HHhhCC-CceEEEEeecCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccC
Q 018519 117 -----VASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLG 190 (354)
Q Consensus 117 -----i~~~~~-~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~ 190 (354)
+.+..| .+.+.+|-..... .+..+.++..|++++.+|++..+ ...+|++. .++.+
T Consensus 133 ~~~~~v~r~~P~~~~ianig~~~~~---e~~~~~ve~~~adal~ihln~~q----------e~~~p~Gd--~~~~~---- 193 (365)
T 3sr7_A 133 DTSYQVKKSRPHLLLATNIGLDKPY---QAGLQAVRDLQPLFLQVHINLMQ----------ELLMPEGE--REFRS---- 193 (365)
T ss_dssp ------------CCEEEEEETTSCH---HHHHHHHHHHCCSCEEEEECHHH----------HHTSSSSC--CCCHH----
T ss_pred ccceEehhhCCCCcEEEEeCCCCCH---HHHHHHHHhcCCCEEEEeccccc----------cccCCCCC--CcHHH----
Confidence 223334 4555555432222 34556677889999999998542 12334431 11111
Q ss_pred cCcccchhhHHHHHhhhcCCccccccc---CCHHHHHHHHHhCCCEEEEecCCcCCC---------------CCCcChHH
Q 018519 191 KMDEANDSGLAAYVAGQIDRSLSWKGV---LTAEDARIAVQAGAAGIIVSNHGARQL---------------DYVPATIM 252 (354)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~w~Gi---~~~~~a~~~~~~G~d~I~vs~~gg~~~---------------~~~~~~~~ 252 (354)
-...++.+++....| +..|++ .++++|+.+.++|+|+|+|+||||+++ +++.|+.+
T Consensus 194 -----~~~~I~~l~~~~~~P-VivK~vg~g~s~e~A~~l~~aGad~I~V~g~GGt~~a~ie~~r~~~~~~~~~~g~pt~~ 267 (365)
T 3sr7_A 194 -----WKKHLSDYAKKLQLP-FILKEVGFGMDVKTIQTAIDLGVKTVDISGRGGTSFAYIENRRGGNRSYLNQWGQTTAQ 267 (365)
T ss_dssp -----HHHHHHHHHHHCCSC-EEEEECSSCCCHHHHHHHHHHTCCEEECCCBC--------------CGGGTTCSCBHHH
T ss_pred -----HHHHHHHHHHhhCCC-EEEEECCCCCCHHHHHHHHHcCCCEEEEeCCCCcccchhhccccccccccccccccHHH
Confidence 012245555544344 444556 799999999999999999999999864 67899999
Q ss_pred HHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHhCCCChh
Q 018519 253 ALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLK 332 (354)
Q Consensus 253 ~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~i~ 332 (354)
.|+++. .+.+++|||++|||+++.|++|+|++|||+|++||||++++.+.|++++.++++.+.+||+.+|.++|+++++
T Consensus 268 ~L~~v~-~~~~~ipvia~GGI~~g~Dv~KaLalGAdaV~ig~~~l~a~~~~G~~~v~~~l~~l~~eL~~~m~~~G~~si~ 346 (365)
T 3sr7_A 268 VLLNAQ-PLMDKVEILASGGIRHPLDIIKALVLGAKAVGLSRTMLELVEQHSVHEVIAIVNGWKEDLRLIMCALNCQTIA 346 (365)
T ss_dssp HHHHHG-GGTTTSEEEECSSCCSHHHHHHHHHHTCSEEEESHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHTTCSSTG
T ss_pred HHHHHH-HhcCCCeEEEeCCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhCCcCHH
Confidence 998764 4555899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccceeecc
Q 018519 333 EITRDHIVTEW 343 (354)
Q Consensus 333 ~l~~~~l~~~~ 343 (354)
||++..+...+
T Consensus 347 eL~~~~~~~~~ 357 (365)
T 3sr7_A 347 ELRNVDYLLYG 357 (365)
T ss_dssp GGGGCCEEECH
T ss_pred HhccCCEEEcc
Confidence 99998877654
No 8
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=100.00 E-value=8.2e-41 Score=322.34 Aligned_cols=283 Identities=26% Similarity=0.273 Sum_probs=204.6
Q ss_pred cccccCCccchHHHHHhHhhcccceeeccccC--CCCCCccceeEcCeeeccceEecccccccccCChh---hHHHHHHH
Q 018519 23 FDYYASGAEDQWTLQENRNAFSRILFRPRILI--DVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEG---EYATARAA 97 (354)
Q Consensus 23 ~~y~~~ga~~~~t~~~N~~~~~~i~l~pr~l~--~~~~vd~st~l~g~~l~~Pi~iAPm~~~~l~~~~~---e~~la~aa 97 (354)
.+|+..+.+++.|+++|+.+|++|+|+||+|+ +++++||+|+|+|++++.||++|||++. ++.+ +.++|++|
T Consensus 8 ~~hi~~~~~~~~~~~~~~~~f~~~~l~p~~l~~~~~~~~d~~~~i~g~~l~~P~~iapm~g~---~~~~~~~~~~la~~a 84 (332)
T 1vcf_A 8 RKHLEACLEGEVAYQKTTTGLEGFRLRYQALAGLALSEVDLTTPFLGKTLKAPFLIGAMTGG---EENGERINLALAEAA 84 (332)
T ss_dssp ---------------CCCCSGGGEEECCCTTCCCCGGGCCCCEEETTEEESSSEEECCCC------CCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCcccccchhhhhhcEEehhhCCCCCCCCCCcceEECCcccCCceEEeccccC---CcchhHHHHHHHHHH
Confidence 48899999999999999999999999999998 7899999999999999999999999864 5544 47999999
Q ss_pred HHcCCcEEecCCCCCCHHHH--------HhhCC-CceE-----EEEeecCChHHHHHHHHHHHHcCCCEEEEecCCCCCC
Q 018519 98 SAAGTIMTLSSWSTSSVEEV--------ASTGP-GIRF-----FQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLG 163 (354)
Q Consensus 98 ~~~G~~~~~s~~~~~~~eei--------~~~~~-~~~~-----~QLy~~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g 163 (354)
+++|+++++|++++. +|+. ....+ .|.+ .|++ ..+++...+. ++..+++++.+++++..
T Consensus 85 ~~~G~~~~~~~~~~~-le~~~~~~~~ql~~~~~d~pv~~~~~~~q~~-~~~~~~~~~a---~~~~~~~a~~i~~n~~~-- 157 (332)
T 1vcf_A 85 EALGVGMMLGSGRIL-LERPEALRSFRVRKVAPKALLIANLGLAQLR-RYGRDDLLRL---VEMLEADALAFHVNPLQ-- 157 (332)
T ss_dssp HHHTCEEEEEECHHH-HHCTTTHHHHCCTTTCSSSCEEEEEEGGGGG-TCCHHHHHHH---HHHHTCSEEEEECCHHH--
T ss_pred HHcCCCEEeCCchhc-ccCCCccceEEeeccCCCceeecccChhhhh-ccChHHHHHH---HhhcCCCceeeccchHH--
Confidence 999999999998653 4431 11111 2332 2222 1233443333 34558899999886421
Q ss_pred chhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCccccccc---CCHHHHHHHHHhCCCEEEEecCC
Q 018519 164 RREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKGV---LTAEDARIAVQAGAAGIIVSNHG 240 (354)
Q Consensus 164 ~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~Gi---~~~~~a~~~~~~G~d~I~vs~~g 240 (354)
+ .+ + .+ ...+.. ....+.++.+ . ..++..+++ +++++|+.+.++|+|+|+|||||
T Consensus 158 ----~---~~-~-~~--~~~~~~---------~~~~i~~vr~-~-~~Pv~vK~v~~g~~~e~a~~~~~~G~d~I~vs~~g 215 (332)
T 1vcf_A 158 ----E---AV-Q-RG--DTDFRG---------LVERLAELLP-L-PFPVMVKEVGHGLSREAALALRDLPLAAVDVAGAG 215 (332)
T ss_dssp ----H---HH-T-TS--CCCCTT---------HHHHHHHHCS-C-SSCEEEECSSSCCCHHHHHHHTTSCCSEEECCCBT
T ss_pred ----H---Hh-c-CC--CccHHH---------HHHHHHHHHc-C-CCCEEEEecCCCCCHHHHHHHHHcCCCEEEeCCCC
Confidence 0 01 0 00 000100 0112333333 3 344555656 89999999999999999999998
Q ss_pred c---------CC---------CCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHHHHHhh
Q 018519 241 A---------RQ---------LDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAA 302 (354)
Q Consensus 241 g---------~~---------~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l~~~~~ 302 (354)
| ++ .++++++++.|.+++++++ ++|||++|||+++.|++|+|++|||+|++||||++++ +
T Consensus 216 gt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~v~~~~~-~ipvia~GGI~~~~d~~kal~~GAd~V~igr~~l~~~-~ 293 (332)
T 1vcf_A 216 GTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREVLP-HLPLVASGGVYTGTDGAKALALGADLLAVARPLLRPA-L 293 (332)
T ss_dssp SCCHHHHHHTC--------CCTTCSCBHHHHHHHHHHHCS-SSCEEEESSCCSHHHHHHHHHHTCSEEEECGGGHHHH-T
T ss_pred CCcchhHHHhhccccchhhhHhhccccHHHHHHHHHHhcC-CCeEEEECCCCCHHHHHHHHHhCCChHhhhHHHHHHH-h
Confidence 8 55 6789999999999999875 6999999999999999999999999999999999998 7
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHhCCCChhhhcccce
Q 018519 303 EGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHI 339 (354)
Q Consensus 303 ~G~~gv~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l 339 (354)
.|++++.++++.+.+||+.+|.++|+++++||+++.-
T Consensus 294 ~G~~gv~~~~~~l~~el~~~m~~~G~~~i~el~~~~~ 330 (332)
T 1vcf_A 294 EGAERVAAWIGDYLEELRTALFAIGARNPKEARGRVE 330 (332)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHTCSSGGGGTTCEE
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHhhhhc
Confidence 8999999999999999999999999999999987643
No 9
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=100.00 E-value=3.3e-38 Score=306.10 Aligned_cols=277 Identities=23% Similarity=0.307 Sum_probs=214.5
Q ss_pred hHhhcccceeeccccC--CCCCCccceeEcCeeeccceEeccccccc-ccCChhhHHHHHHHHHcCCcEEecCCCCCCHH
Q 018519 39 NRNAFSRILFRPRILI--DVSKIDMNTTVLGFKISMPIMIAPTAMQK-MAHPEGEYATARAASAAGTIMTLSSWSTSSVE 115 (354)
Q Consensus 39 N~~~~~~i~l~pr~l~--~~~~vd~st~l~g~~l~~Pi~iAPm~~~~-l~~~~~e~~la~aa~~~G~~~~~s~~~~~~~e 115 (354)
++.+|++|+|+||+|+ +++++||+|+|+|++++.||++|||++.. ..+++++.+++++|+++|+++++|++++. ++
T Consensus 21 ~~~~f~~~~l~p~~l~~~~~~~~d~~~~i~g~~~~~P~~iApm~g~~~~~~~~~~~~~a~aa~~~G~~~~~~~~~~~-l~ 99 (349)
T 1p0k_A 21 RETGLDDITFVHVSLPDLALEQVDISTKIGELSSSSPIFINAMTGGGGKLTYEINKSLARAASQAGIPLAVGSQMSA-LK 99 (349)
T ss_dssp CCCSGGGEEECCCSCCCCCGGGCBCCEEETTEEESCSEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCEECCCCTTT-TT
T ss_pred ccCccceEEEEccccCCCCcccCCceeEECCcccCCceEEcCccccchhhhhHHHHHHHHHHHHcCCcEEeccchhc-cc
Confidence 3568999999999998 77999999999999999999999996544 44566789999999999999999998653 32
Q ss_pred H---------HHhhCC-CceEEEEeecCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCcccccc
Q 018519 116 E---------VASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQ 185 (354)
Q Consensus 116 e---------i~~~~~-~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~ 185 (354)
+ +.+..+ .|.+.|+....+.+... +.++++|+++|.+|++||.. +..|.+ .+.+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~pv~~~i~~~~~~~~~~---~~~~~~gad~i~i~~~~~~~----------~~~~~~--~~~~~ 164 (349)
T 1p0k_A 100 DPSERLSYEIVRKENPNGLIFANLGSEATAAQAK---EAVEMIGANALQIHLNVIQE----------IVMPEG--DRSFS 164 (349)
T ss_dssp CHHHHHHHHHHHHHCSSSCEEEEEETTCCHHHHH---HHHHHTTCSEEEEEECTTTT----------C----------CT
T ss_pred CcccccceehhhhhCCCceeEEeecCCCCHHHHH---HHHHhcCCCeEEecccchhh----------hcCCCC--CcchH
Confidence 2 222333 67888987445555433 44667899999999999862 111211 01110
Q ss_pred CCccCcCcccchhhHHHHHhhhcCCccccccc---CCHHHHHHHHHhCCCEEEEecCCc---------CC-------CCC
Q 018519 186 GLDLGKMDEANDSGLAAYVAGQIDRSLSWKGV---LTAEDARIAVQAGAAGIIVSNHGA---------RQ-------LDY 246 (354)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~Gi---~~~~~a~~~~~~G~d~I~vs~~gg---------~~-------~~~ 246 (354)
+ ....+.++.+....| +..+++ .++++++.+.++|+|+|+|+|||| ++ .++
T Consensus 165 ~---------~~~~i~~vr~~~~~P-v~vK~~~~~~~~~~a~~a~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~ 234 (349)
T 1p0k_A 165 G---------ALKRIEQICSRVSVP-VIVKEVGFGMSKASAGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSW 234 (349)
T ss_dssp T---------HHHHHHHHHHHCSSC-EEEEEESSCCCHHHHHHHHHHTCSEEEEEC---------------CCGGGGTTC
T ss_pred H---------HHHHHHHHHHHcCCC-EEEEecCCCCCHHHHHHHHHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhcc
Confidence 0 011234444443334 333433 789999999999999999999998 43 477
Q ss_pred CcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHh
Q 018519 247 VPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALS 326 (354)
Q Consensus 247 ~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~ 326 (354)
++++++.|.++++.+ .++|||++|||++++|+.|++++|||+|++||||++...+.|++++.++++.+.+||+.+|.++
T Consensus 235 g~~~~~~l~~v~~~~-~~ipvia~GGI~~~~d~~k~l~~GAd~V~iG~~~l~~~~~~g~~~~~~~~~~~~~~l~~~m~~~ 313 (349)
T 1p0k_A 235 GISTAASLAEIRSEF-PASTMIASGGLQDALDVAKAIALGASCTGMAGHFLKALTDSGEEGLLEEIQLILEELKLIMTVL 313 (349)
T ss_dssp SCCHHHHHHHHHHHC-TTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHhc-CCCeEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 899999999999876 4799999999999999999999999999999999999887788999999999999999999999
Q ss_pred CCCChhhhcccceeec
Q 018519 327 GCRSLKEITRDHIVTE 342 (354)
Q Consensus 327 G~~~i~~l~~~~l~~~ 342 (354)
|+.+++|++++.+...
T Consensus 314 G~~~i~el~~~~~~~~ 329 (349)
T 1p0k_A 314 GARTIADLQKAPLVIK 329 (349)
T ss_dssp TCCBHHHHTTCCEEEC
T ss_pred CCCCHHHHhhCCeecc
Confidence 9999999999988764
No 10
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=100.00 E-value=9.8e-41 Score=328.72 Aligned_cols=311 Identities=18% Similarity=0.238 Sum_probs=226.7
Q ss_pred HHhCCccccccccCCccchHHHHHhHhhcccceeecc-ccCCCCCCccceeEcCeeeccceEecccccccccCChhhHHH
Q 018519 15 KEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPR-ILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYAT 93 (354)
Q Consensus 15 ~~~l~~~~~~y~~~ga~~~~t~~~N~~~~~~i~l~pr-~l~~~~~vd~st~l~g~~l~~Pi~iAPm~~~~l~~~~~e~~l 93 (354)
..+||+..|+|+.+|++++ ++|..+||+|+|+|+ .+++++++||+|+|+|++++.||++|||++.+ ++ ++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~---~~~~~~fd~v~l~p~~~~~~~~~vdlst~l~g~~l~~Pii~Apm~g~~--~~----~~ 83 (393)
T 2qr6_A 13 ENLYFQGMRDHVEIGIGRE---ARRTYSLDDISVVSSRRTRSSKDVDTTWHIDAYKFDLPFMNHPSDALA--SP----EF 83 (393)
T ss_dssp -CHHHHHHHHEEEEETTEE---EECCCCGGGEEECCCSCCCCGGGCBCCEEETTEEESSSEEECCCTTTC--CH----HH
T ss_pred ccccccchHHHHhcccccc---cccCCChhhEEEccCCCCCChhHCCceeEEcccccCCCeEeCCCCCcc--cH----HH
Confidence 3578999999999999999 458999999999998 88999999999999999999999999998543 44 79
Q ss_pred HHHHHHcCCcEEecC--------CCCCCHHHHHhhCC-------CceEEEEeecC-ChHHHHHHHHHHHHcCCCEEEEec
Q 018519 94 ARAASAAGTIMTLSS--------WSTSSVEEVASTGP-------GIRFFQLYVYK-DRNVVAQLVRRAERAGFKAIALTV 157 (354)
Q Consensus 94 a~aa~~~G~~~~~s~--------~~~~~~eei~~~~~-------~~~~~QLy~~~-d~~~~~~~~~~a~~~G~~ai~i~v 157 (354)
|++++++|+++++++ ..+.++|++++..+ .+.|+|+|... |++...+.+++++++|+.++. .+
T Consensus 84 a~a~a~~G~~gvl~~~~~~~~~~~~~~~~eeia~~~~~~d~~~g~~~~~q~~~~~~d~~~~~~~i~~~~~~g~~v~~-~v 162 (393)
T 2qr6_A 84 VIEMGKQGGLGVINAEGLWGRHADLDEAIAKVIAAYEEGDQAAATRTLQELHAAPLDTELLSERIAQVRDSGEIVAV-RV 162 (393)
T ss_dssp HHHHHHTTSBCEEETTSSTTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTSCCEE-EE
T ss_pred HHHHHHcCCcEEEEecceecccCCchhHHHHHHHHHHhcCCCccchhhhhcccccCCHHHHHHHHHHHhhcCCeEEE-Ee
Confidence 999999999999987 22235567765422 35789988544 899999999999999887765 23
Q ss_pred CCCCCCchhHHhhhccCCCCcCcccccc--CCccCcCcc-cchhhHHHHHhhhcCCcccccccCCHHHHHHHHHhCCCEE
Q 018519 158 DTPRLGRREADIKNRFTLPPFLTLKNFQ--GLDLGKMDE-ANDSGLAAYVAGQIDRSLSWKGVLTAEDARIAVQAGAAGI 234 (354)
Q Consensus 158 d~p~~g~r~~~~r~~~~~p~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~w~Gi~~~~~a~~~~~~G~d~I 234 (354)
. +.+..+....+. ..+...-.+. ......... .....+..+++....|.+. +|+.++++|+.+.++|+|+|
T Consensus 163 ~----~~~~~e~a~~~~-~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~~~~pvi~-ggi~t~e~a~~~~~~Gad~i 236 (393)
T 2qr6_A 163 S----PQNVREIAPIVI-KAGADLLVIQGTLISAEHVNTGGEALNLKEFIGSLDVPVIA-GGVNDYTTALHMMRTGAVGI 236 (393)
T ss_dssp C----TTTHHHHHHHHH-HTTCSEEEEECSSCCSSCCCC-----CHHHHHHHCSSCEEE-ECCCSHHHHHHHHTTTCSEE
T ss_pred C----CccHHHHHHHHH-HCCCCEEEEeCCccccccCCCcccHHHHHHHHHhcCCCEEE-CCcCCHHHHHHHHHcCCCEE
Confidence 2 223333222211 0011000000 000000000 0112355555554444333 78999999999999999999
Q ss_pred EEec--CCcCCCC-CCcChHHHHHHHHHH-------hcCC-ccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHH-------
Q 018519 235 IVSN--HGARQLD-YVPATIMALEEVVKA-------TQGR-IPVFLDGGVRRGTDVFKALALGASGIFIGRPV------- 296 (354)
Q Consensus 235 ~vs~--~gg~~~~-~~~~~~~~l~~i~~~-------~~~~-i~vi~~GGi~~g~dv~kalalGAd~V~igr~~------- 296 (354)
+|++ |++++++ +++++++.|++++++ ++++ +|||++|||+++.|++|+|++|||+|++||+|
T Consensus 237 ~vg~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~~~~dv~kalalGA~~V~iG~~~l~~~es~ 316 (393)
T 2qr6_A 237 IVGGGENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIADGSIENSGDVVKAIACGADAVVLGSPLARAEEAA 316 (393)
T ss_dssp EESCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCCSHHHHHHHHHHTCSEEEECGGGGGSTTCT
T ss_pred EECCCcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEECCCCCHHHHHHHHHcCCCEEEECHHHHcCCCCC
Confidence 9977 6666554 479999999999887 5434 99999999999999999999999999999996
Q ss_pred ----HHHHhhcCH---HHH--------------HHHH----------HHHHHHHHHHHHHhCCCChhhhcccceee
Q 018519 297 ----VYSLAAEGE---KGV--------------RRVL----------EMLREEFELAMALSGCRSLKEITRDHIVT 341 (354)
Q Consensus 297 ----l~~~~~~G~---~gv--------------~~~l----------~~l~~el~~~m~~~G~~~i~~l~~~~l~~ 341 (354)
+|++++.|. +|+ .+++ ..+.+||+..|.++|+++++||++..+..
T Consensus 317 ~~~~~~g~~~~~~~~~~Gv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~el~~~m~~~G~~~i~el~~~~~~~ 392 (393)
T 2qr6_A 317 GKGYFWPAVAAHPRFPRGVVTESVDLDEAAPSLEQILHGPSTMPWGVENFEGGLKRALAKCGYTDLKSFQKVSLHV 392 (393)
T ss_dssp TTTEECCGGGGCSSSCCCCCEECC----CCCCHHHHHHCCCSCTTSSSCHHHHHHHHHHHHTCSBHHHHTTCCEEE
T ss_pred CceEEEecccCcccCCCccccccccccccchhHHHHhccchhHHHHHHHHHHHHHHHHHHhCCCCHHHHhhccEec
Confidence 555554432 232 2333 36689999999999999999999887764
No 11
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=100.00 E-value=4e-38 Score=306.48 Aligned_cols=277 Identities=21% Similarity=0.201 Sum_probs=212.3
Q ss_pred hhcccceeeccccC--CCCCCccceeEcCeeeccceEecccccccccCChhhHHHHHHHHHcCCcEEecCCCCC------
Q 018519 41 NAFSRILFRPRILI--DVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTS------ 112 (354)
Q Consensus 41 ~~~~~i~l~pr~l~--~~~~vd~st~l~g~~l~~Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~s~~~~~------ 112 (354)
+.|++|+|+|+.|+ +.+++||+|+|+|++++.||++|||+|++....+.+..||++|+++|+++++|+++..
T Consensus 27 ~~~~~v~l~~~~lp~~~~~~vd~st~~~g~~l~~Pv~ia~MtGgt~~~~~in~~la~~a~~~G~~~~vGs~~~~l~~~~~ 106 (368)
T 3vkj_A 27 TFLNDVILVHQGFPGISFSEINTKTKFFRKEISVPVMVTGMTGGRNELGRINKIIAEVAEKFGIPMGVGSQRVAIEKAEA 106 (368)
T ss_dssp CSGGGEEECCCSSCBSBGGGCBCCEEETTEEESSSEEECCCCCSSHHHHHHHHHHHHHHHHHTCCEECCCCHHHHHCGGG
T ss_pred CCcceEEEEcCCCCccCcccccceeEECCEeccCCeEEecCCCCCchhhHHHHHHHHHHHHhCCCeeeecchhccCCHHH
Confidence 48999999999998 7899999999999999999999999887754445677899999999999999998421
Q ss_pred --CHHHHHhhCC-CceEEEEee----c-CChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccc
Q 018519 113 --SVEEVASTGP-GIRFFQLYV----Y-KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNF 184 (354)
Q Consensus 113 --~~eei~~~~~-~~~~~QLy~----~-~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~ 184 (354)
+.+-+++.+| .+.+-++.. . .+.+...+ .++..+++++.|+++... +...|.+. +.+
T Consensus 107 ~~s~~~vr~~ap~~~~~anlg~~ql~~~~~~~~~~~---av~~~~a~al~Ihln~~~----------~~~~p~g~--~~~ 171 (368)
T 3vkj_A 107 RESFAIVRKVAPTIPIIANLGMPQLVKGYGLKEFQD---AIQMIEADAIAVHLNPAQ----------EVFQPEGE--PEY 171 (368)
T ss_dssp SHHHHHHHHHCSSSCEEEEEEGGGGGTTCCHHHHHH---HHHHTTCSEEEEECCHHH----------HHHSSSCC--CBC
T ss_pred HhhHHHHHHhCcCcceecCcCeeecCCCCCHHHHHH---HHHHhcCCCeEEEecchh----------hhhCCCCC--chh
Confidence 1112444566 445555554 1 23333322 344458899999987321 11123321 111
Q ss_pred cCCccCcCcccchhhHHHHHhhhcCCccccccc---CCHHHHHHHHHhCCCEEEEecCCc---------CC---------
Q 018519 185 QGLDLGKMDEANDSGLAAYVAGQIDRSLSWKGV---LTAEDARIAVQAGAAGIIVSNHGA---------RQ--------- 243 (354)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~Gi---~~~~~a~~~~~~G~d~I~vs~~gg---------~~--------- 243 (354)
. ......++.+++....|. ..|++ +++++|+.+.++|+|+|+|+|||| |+
T Consensus 172 ~--------~~~~~~i~~i~~~~~vPV-ivK~vG~g~s~~~A~~l~~aGad~I~V~g~GGt~~~~iE~~R~~~~~~~~~~ 242 (368)
T 3vkj_A 172 Q--------IYALEKLRDISKELSVPI-IVKESGNGISMETAKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKAE 242 (368)
T ss_dssp B--------THHHHHHHHHHTTCSSCE-EEECSSSCCCHHHHHHHHHTTCCEEECCCBTSBCHHHHHHHHHHHTTCTHHH
T ss_pred h--------HHHHHHHHHHHHHcCCCE-EEEeCCCCCCHHHHHHHHhCCCCEEEEeCCCCCcccchhhhhcccccccchh
Confidence 1 001223455555444444 44444 799999999999999999999999 43
Q ss_pred -----CCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHHHHHhhcCHHHHHHHHHHHHHH
Q 018519 244 -----LDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREE 318 (354)
Q Consensus 244 -----~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l~~~~~~G~~gv~~~l~~l~~e 318 (354)
.+++.|+...|.+++++++ ++|||++|||+++.|++|+|++|||+|++||||++++. .|++++.++++.+.+|
T Consensus 243 ~~~~~~~~g~pt~~~l~~v~~~~~-~ipvia~GGI~~~~d~~kal~lGA~~v~ig~~~l~~~~-~G~~~v~~~l~~l~~e 320 (368)
T 3vkj_A 243 SAKNFLDWGVPTAASIMEVRYSVP-DSFLVGSGGIRSGLDAAKAIALGADIAGMALPVLKSAI-EGKESLEQFFRKIIFE 320 (368)
T ss_dssp HHHHTTTCSCBHHHHHHHHHHHST-TCEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHHH-HCHHHHHHHHHHHHHH
T ss_pred hccccccccccHHHHHHHHHHHcC-CCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHHHHh-cChHHHHHHHHHHHHH
Confidence 3458999999999998874 69999999999999999999999999999999999876 6899999999999999
Q ss_pred HHHHHHHhCCCChhhhcccceeecc
Q 018519 319 FELAMALSGCRSLKEITRDHIVTEW 343 (354)
Q Consensus 319 l~~~m~~~G~~~i~~l~~~~l~~~~ 343 (354)
|+.+|.++|+++++||++..+...+
T Consensus 321 L~~~m~~~G~~~i~el~~~~l~~~~ 345 (368)
T 3vkj_A 321 LKAAMMLTGSKDVDALKKTSIVILG 345 (368)
T ss_dssp HHHHHHHTTCCBHHHHHTCCEEECH
T ss_pred HHHHHHHhCCCCHHHhccCCEEech
Confidence 9999999999999999998887643
No 12
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=100.00 E-value=3.6e-35 Score=283.32 Aligned_cols=267 Identities=18% Similarity=0.178 Sum_probs=189.3
Q ss_pred HHHHHhHhhcccceeeccc--cCCCCCCccceeEcCeeeccceEecccccccccCChhhHHHHHHHHHcC-CcEEecCCC
Q 018519 34 WTLQENRNAFSRILFRPRI--LIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAG-TIMTLSSWS 110 (354)
Q Consensus 34 ~t~~~N~~~~~~i~l~pr~--l~~~~~vd~st~l~g~~l~~Pi~iAPm~~~~l~~~~~e~~la~aa~~~G-~~~~~s~~~ 110 (354)
+-.-.|..+||+|.|+||+ +++++++||+|+|+|++++.||++|||++.+ +..+++++.+.| +.+...++.
T Consensus 7 ~~~~~~~~~fd~v~l~p~~~~~~~~~~vdl~t~i~g~~l~~Pi~~a~mag~s------~~~la~a~~~~gg~g~~~~~~~ 80 (336)
T 1ypf_A 7 HHHMGNVFDYEDIQLIPAKCIVNSRSECDTTVTLGKHKFKLPVVPANMQTII------DERIATYLAENNYFYIMHRFQP 80 (336)
T ss_dssp -----CCCCGGGEEECCCCCCCSSGGGCBCCEEETTEEESSSEEECSSTTTC------CHHHHHHHHHTTCCCCCCCSSG
T ss_pred cccccccCCcceEEEecccCCCCCcccCcceEEECCEEecCcEEECCCCCCC------hHHHHHHHHhCCCEEEecCCCC
Confidence 3456799999999999999 5789999999999999999999999999876 457877655554 444444332
Q ss_pred CCCHHHHHhh--CCCceEEEEeecCChHHHHHHHHHHHHcC--CCEEEEecCCCCCCchhHHhhhccCCCCcCccccccC
Q 018519 111 TSSVEEVAST--GPGIRFFQLYVYKDRNVVAQLVRRAERAG--FKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQG 186 (354)
Q Consensus 111 ~~~~eei~~~--~~~~~~~QLy~~~d~~~~~~~~~~a~~~G--~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~ 186 (354)
....+.+.+. ..-+..+|+ ..+.+. .+.++.+.++| ++++.+|+. . |. +.
T Consensus 81 ~~~~~~i~~~~~~g~~v~v~~--g~~~~~-~~~a~~~~~~g~~~~~i~i~~~--~-G~-----------~~--------- 134 (336)
T 1ypf_A 81 EKRISFIRDMQSRGLIASISV--GVKEDE-YEFVQQLAAEHLTPEYITIDIA--H-GH-----------SN--------- 134 (336)
T ss_dssp GGHHHHHHHHHHTTCCCEEEE--CCSHHH-HHHHHHHHHTTCCCSEEEEECS--S-CC-----------SH---------
T ss_pred HHHHHHHHHHHhcCCeEEEeC--CCCHHH-HHHHHHHHhcCCCCCEEEEECC--C-CC-----------cH---------
Confidence 2111222222 122466774 234443 35577778888 888887652 1 10 00
Q ss_pred CccCcCcccchhhHHHHHhhhcCCcccccc-cCCHHHHHHHHHhCCCEEEEecCCcCCCC------CCcC--hHHHHHHH
Q 018519 187 LDLGKMDEANDSGLAAYVAGQIDRSLSWKG-VLTAEDARIAVQAGAAGIIVSNHGARQLD------YVPA--TIMALEEV 257 (354)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~w~G-i~~~~~a~~~~~~G~d~I~vs~~gg~~~~------~~~~--~~~~l~~i 257 (354)
.....++.+.+....++ .++| +.++++|+.+.++|||+|+|+||||++.+ ++.+ +++.|+++
T Consensus 135 --------~~~~~i~~lr~~~~~~~-vi~G~v~s~e~A~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g~~g~~~~~l~~v 205 (336)
T 1ypf_A 135 --------AVINMIQHIKKHLPESF-VIAGNVGTPEAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWC 205 (336)
T ss_dssp --------HHHHHHHHHHHHCTTSE-EEEEEECSHHHHHHHHHHTCSEEEECSSCSTTCHHHHHHSCSSTTCHHHHHHHH
T ss_pred --------HHHHHHHHHHHhCCCCE-EEECCcCCHHHHHHHHHcCCCEEEEecCCCceeecccccCcCCchhHHHHHHHH
Confidence 00112344444332333 3456 89999999999999999999999998754 4555 78999999
Q ss_pred HHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHH--------------------HHHhhcCHHHHH--------
Q 018519 258 VKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV--------------------YSLAAEGEKGVR-------- 309 (354)
Q Consensus 258 ~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l--------------------~~~~~~G~~gv~-------- 309 (354)
++++ ++|||++|||+++.|++|||++|||+|++||+|+ |++++.|++|+.
T Consensus 206 ~~~~--~ipVIa~GGI~~g~Dv~kalalGAdaV~iGr~~l~t~Es~~~~~~~~g~~~k~~~g~~~~~~~g~~~~~~g~~~ 283 (336)
T 1ypf_A 206 AKAA--SKPIIADGGIRTNGDVAKSIRFGATMVMIGSLFAGHEESPGETIEKDGKLYKEYFGSASEFQKGEKKNVEGKKM 283 (336)
T ss_dssp HHTC--SSCEEEESCCCSTHHHHHHHHTTCSEEEESGGGTTCTTSSSCCC-----------------------CTTSCCS
T ss_pred HHHc--CCcEEEeCCCCCHHHHHHHHHcCCCEEEeChhhhccccCCCceeeeCCeEeeeeecccchhhccCcccccccee
Confidence 9987 8999999999999999999999999999999999 888887877666
Q ss_pred ---------HHHHHHHHHHHHHHHHhCCCChhhhcccceeecc
Q 018519 310 ---------RVLEMLREEFELAMALSGCRSLKEITRDHIVTEW 343 (354)
Q Consensus 310 ---------~~l~~l~~el~~~m~~~G~~~i~~l~~~~l~~~~ 343 (354)
++++.+.+||+..|.++|+++++||++..+....
T Consensus 284 ~~~~~g~~~~~~~~l~~el~~~m~~~G~~~i~el~~~~~~~~~ 326 (336)
T 1ypf_A 284 FVEHKGSLEDTLIEMEQDLQSSISYAGGTKLDSIRTVDYVVVK 326 (336)
T ss_dssp SSSCCCCHHHHHHHHHHHHHHHHHHTTSSBGGGGGGCCEEECS
T ss_pred eecccccHHHHHHHHHHHHHHHHHHhCcccHHHhCcCCEEEEc
Confidence 8999999999999999999999999988776543
No 13
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=100.00 E-value=9.6e-34 Score=274.50 Aligned_cols=263 Identities=18% Similarity=0.196 Sum_probs=194.9
Q ss_pred HHHHhHhhcccceeeccccC-CC-CCCccceeEc-----CeeeccceEecccccccccCChhhHHHHHHHHHcCCcEEec
Q 018519 35 TLQENRNAFSRILFRPRILI-DV-SKIDMNTTVL-----GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLS 107 (354)
Q Consensus 35 t~~~N~~~~~~i~l~pr~l~-~~-~~vd~st~l~-----g~~l~~Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~s 107 (354)
-.++|..+||+|.|+|+++. ++ +++||+|+|+ +++++.||++|||++.+ +.++|++++++|..++++
T Consensus 14 ~~~~~~~~fddv~l~p~~~~~~~~~~vdl~t~l~~~~~~~~~l~~PIi~ApM~~~~------~~~lA~Ava~~Gglg~i~ 87 (351)
T 2c6q_A 14 LVPRGSLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQTYSGVPIIAANMDTVG------TFEMAKVLCKFSLFTAVH 87 (351)
T ss_dssp -----CCCGGGEEECCCCBCCCCGGGCBCCEEEECTTTCCEEEECCEEECSSTTTS------CHHHHHHHHHTTCEEECC
T ss_pred ccccCCCCcceEEEECCCCCCCccccceeEEEeccccCcCccccCCEEECCCCCCC------cHHHHHHHHHCCCEEEEc
Confidence 35779999999999999986 67 7999999998 99999999999998654 679999999999988887
Q ss_pred CCCCCCHHHHHhh---CCC---ceEEEEeecCChHHHHHHHHHHHHc--CCCEEEEecCCCCCCchhHHhhhccCCCCcC
Q 018519 108 SWSTSSVEEVAST---GPG---IRFFQLYVYKDRNVVAQLVRRAERA--GFKAIALTVDTPRLGRREADIKNRFTLPPFL 179 (354)
Q Consensus 108 ~~~~~~~eei~~~---~~~---~~~~QLy~~~d~~~~~~~~~~a~~~--G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~ 179 (354)
. +.++|++.+. .|. .....+ ..+.+.. +.++.+.+. |++++.+++.. |. +.
T Consensus 88 ~--~~s~e~~~~~i~~~p~~l~~v~~~~--g~~~~~~-~~~~~l~~~~~g~~~i~i~~~~---g~-----------~~-- 146 (351)
T 2c6q_A 88 K--HYSLVQWQEFAGQNPDCLEHLAASS--GTGSSDF-EQLEQILEAIPQVKYICLDVAN---GY-----------SE-- 146 (351)
T ss_dssp T--TCCHHHHHHHHHHCGGGCTTEEEEE--CSSHHHH-HHHHHHHHHCTTCCEEEEECSC---TT-----------BH--
T ss_pred C--CCCHHHHHHHHhhCchhhheeEeec--CCChHHH-HHHHHHHhccCCCCEEEEEecC---CC-----------cH--
Confidence 4 5677776543 231 222232 2233332 344444554 89988876531 10 00
Q ss_pred ccccccCCccCcCcccchhhHHHHHhhhcCCcccccccCCHHHHHHHHHhCCCEEEEecCCcC-----CC-CCCcChHHH
Q 018519 180 TLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKGVLTAEDARIAVQAGAAGIIVSNHGAR-----QL-DYVPATIMA 253 (354)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~Gi~~~~~a~~~~~~G~d~I~vs~~gg~-----~~-~~~~~~~~~ 253 (354)
. ....++++.+....-++...++.++++|+.+.++|+|+|+|++|||+ ++ .++.|++..
T Consensus 147 ---~------------~~~~i~~lr~~~~~~~vi~g~v~t~e~A~~a~~aGaD~I~v~~g~G~~~~~r~~~g~~~p~~~~ 211 (351)
T 2c6q_A 147 ---H------------FVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSA 211 (351)
T ss_dssp ---H------------HHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTBCHHHHHCBCCCHHHH
T ss_pred ---H------------HHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHhCCCEEEECCCCCcCcCccccCCCCccHHHH
Confidence 0 01113333333212234445789999999999999999999998763 22 247889999
Q ss_pred HHHHHHHhcC-CccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHH--------------------HHHhhcC--------
Q 018519 254 LEEVVKATQG-RIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV--------------------YSLAAEG-------- 304 (354)
Q Consensus 254 l~~i~~~~~~-~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l--------------------~~~~~~G-------- 304 (354)
|+++.++++. ++|||++|||+++.|++|||++|||+|++||+|+ |++++.|
T Consensus 212 l~~v~~~~~~~~ipvIa~GGI~~g~di~kAlalGA~~V~vG~~fl~~~Es~~~~~~~~g~~~k~~~g~~~~~a~~~~~g~ 291 (351)
T 2c6q_A 212 VMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGELIERDGKKYKLFYGMSSEMAMKKYAGG 291 (351)
T ss_dssp HHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSCSCEEEETTEEEEEEECTTBHHHHHHHSSS
T ss_pred HHHHHHHHhhcCCcEEEeCCCCCHHHHHHHHHcCCCceeccHHHhcCccCcchhhhhcCeeeeeccccccHhhhhccccc
Confidence 9999877643 7999999999999999999999999999999997 6665443
Q ss_pred ------HHH----------HHHHHHHHHHHHHHHHHHhCCCChhhhcccce
Q 018519 305 ------EKG----------VRRVLEMLREEFELAMALSGCRSLKEITRDHI 339 (354)
Q Consensus 305 ------~~g----------v~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l 339 (354)
++| +.++++.|..||+..|.++|+++++||++...
T Consensus 292 ~~~~~~~~g~~~~~~~~g~v~~~~~~l~~~l~~~m~~~G~~~i~~l~~~~~ 342 (351)
T 2c6q_A 292 VAEYRASEGKTVEVPFKGDVEHTIRDILGGIRSTCTYVGAAKLKELSRRTT 342 (351)
T ss_dssp CCTTCCCCBCEEEEECCBCHHHHHHHHHHHHHHHHHHHTCSBGGGHHHHCC
T ss_pred ccccccccceEEEeeccCcHHHHHHHHHHHHHHHHHHcCCCCHHHHhhCCc
Confidence 367 99999999999999999999999999986543
No 14
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=100.00 E-value=2.1e-32 Score=264.42 Aligned_cols=255 Identities=18% Similarity=0.216 Sum_probs=196.4
Q ss_pred hhcccceeeccccCCCC--CCccc--eeEcCeeeccceEecccccccccCChhhHHHHHHHHHcCCcEEecCCCCCCHHH
Q 018519 41 NAFSRILFRPRILIDVS--KIDMN--TTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEE 116 (354)
Q Consensus 41 ~~~~~i~l~pr~l~~~~--~vd~s--t~l~g~~l~~Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~s~~~~~~~ee 116 (354)
.+||+|.|+|+.+.+++ ++|++ |+|+|++++.||++|||.. .+|.++|++++++|.+++++.+ .++|+
T Consensus 8 ~~fddv~l~P~~~~~~~r~~vd~~~~t~l~g~~l~~Pii~ApM~~------vte~~lA~A~a~~Gg~gvi~~~--~s~ee 79 (361)
T 3r2g_A 8 ITFDDVLLVPSYNHHESRRVVETTSTDRLGKLTLNLPVISANMDT------ITESNMANFMHSKGAMGALHRF--MTIEE 79 (361)
T ss_dssp CCGGGEEECCCCCCSCTTCCCCCCEECTTSSCEESSCEEECCSTT------TCSHHHHHHHHHTTCEEBCCSC--SCHHH
T ss_pred cccceEEEECCCCCCCccccccceeeEEECCEEcCCCEEECCCCC------chHHHHHHHHHHcCCCEEEeCC--CCHHH
Confidence 48999999999998876 76655 5999999999999999943 4588999999999999999864 78998
Q ss_pred HHhhCCCceEEEEeecCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccc
Q 018519 117 VASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEAN 196 (354)
Q Consensus 117 i~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~ 196 (354)
+.+..+...|+|.|...+++...+.++++.++|++.|.++. +. |. +. .+
T Consensus 80 ~~~~i~~~~~~~~~~~g~~~~~~e~~~~a~~aGvdvI~id~--a~-G~-----------~~-----~~------------ 128 (361)
T 3r2g_A 80 NIQEFKKCKGPVFVSVGCTENELQRAEALRDAGADFFCVDV--AH-AH-----------AK-----YV------------ 128 (361)
T ss_dssp HHHHHHTCCSCCBEEECSSHHHHHHHHHHHHTTCCEEEEEC--SC-CS-----------SH-----HH------------
T ss_pred HHHHHhhcceEEEEEcCCCHHHHHHHHHHHHcCCCEEEEeC--CC-CC-----------cH-----hH------------
Confidence 87654445678888777778888999999999999776654 32 11 00 00
Q ss_pred hhhHHHHHhhhcCCcccccccCCHHHHHHHHHhCCCEEEEecCCcCCCC------CCcChHHHHHHHHHHhcCCccEEEc
Q 018519 197 DSGLAAYVAGQIDRSLSWKGVLTAEDARIAVQAGAAGIIVSNHGARQLD------YVPATIMALEEVVKATQGRIPVFLD 270 (354)
Q Consensus 197 ~~~~~~~~~~~~~~~~~w~Gi~~~~~a~~~~~~G~d~I~vs~~gg~~~~------~~~~~~~~l~~i~~~~~~~i~vi~~ 270 (354)
...++.+.+.....++..+++.++++|+.++++|+|+|+|++|+|++.+ .+.|++..|.++++.+ . |||++
T Consensus 129 ~e~I~~ir~~~~~~~Vi~G~V~T~e~A~~a~~aGaD~I~Vg~g~G~~~~tr~~~g~g~p~l~aI~~~~~~~--~-PVIAd 205 (361)
T 3r2g_A 129 GKTLKSLRQLLGSRCIMAGNVATYAGADYLASCGADIIKAGIGGGSVCSTRIKTGFGVPMLTCIQDCSRAD--R-SIVAD 205 (361)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECSHHHHHHHHHTTCSEEEECCSSSSCHHHHHHHCCCCCHHHHHHHHTTSS--S-EEEEE
T ss_pred HHHHHHHHHhcCCCeEEEcCcCCHHHHHHHHHcCCCEEEEcCCCCcCccccccCCccHHHHHHHHHHHHhC--C-CEEEE
Confidence 0112333332222233333589999999999999999999999887542 3567888888777654 2 99999
Q ss_pred CCCCCHHHHHHHHHcCcCEEEEcHHHHHHH---------------------hh-----------------cCH-------
Q 018519 271 GGVRRGTDVFKALALGASGIFIGRPVVYSL---------------------AA-----------------EGE------- 305 (354)
Q Consensus 271 GGi~~g~dv~kalalGAd~V~igr~~l~~~---------------------~~-----------------~G~------- 305 (354)
|||+++.|+.|||++|||+||+||+|+-.. +. .|.
T Consensus 206 GGI~~~~di~kALa~GAd~V~iGr~f~~t~Espg~~~~~~~g~~~k~y~Gm~s~~~~~~~~~~~~~~~~~eG~~~~v~~~ 285 (361)
T 3r2g_A 206 GGIKTSGDIVKALAFGADFVMIGGMLAGSAPTPGEVFQKDDGSKVKRYRGMASREAQEAFLGQMHEWKTAEGVATEVPFK 285 (361)
T ss_dssp SCCCSHHHHHHHHHTTCSEEEESGGGTTBTTSSSCEEECTTSCEEEEESCCHHHHHHHHHTTCCSTTCCSCCCCEEEECB
T ss_pred CCCCCHHHHHHHHHcCCCEEEEChHHhCCccCCceeEEecCCeEEEEEecCCCcchhhhhhccccccccCCcceeecCCC
Confidence 999999999999999999999999986321 00 010
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCChhhhccc
Q 018519 306 KGVRRVLEMLREEFELAMALSGCRSLKEITRD 337 (354)
Q Consensus 306 ~gv~~~l~~l~~el~~~m~~~G~~~i~~l~~~ 337 (354)
..+++++..|...|+..|.++|+.+|+||+..
T Consensus 286 g~~~~~~~~~~~glr~~m~y~G~~~i~~l~~~ 317 (361)
T 3r2g_A 286 ENPDGIIADIIGGLRSGLTYAGADSISELQRK 317 (361)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTCSSHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHhhhcCcccHHHHHhC
Confidence 13788999999999999999999999999543
No 15
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=99.97 E-value=2.8e-29 Score=247.87 Aligned_cols=258 Identities=19% Similarity=0.229 Sum_probs=181.2
Q ss_pred hhcccceeeccccC-CCCCCccceeEc-CeeeccceEecccccccccCChhhHHHHHHHHHcCCcEEecCCCCCCHHHHH
Q 018519 41 NAFSRILFRPRILI-DVSKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA 118 (354)
Q Consensus 41 ~~~~~i~l~pr~l~-~~~~vd~st~l~-g~~l~~Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~s~~~~~~~eei~ 118 (354)
.+||+|.|+|+.+. +++++||+|+|+ |++++.||++|||++.+ +..++.+++++|...+++ ++.++|++.
T Consensus 10 ~~fd~v~l~p~~~~~~~~~vdlst~l~~g~~l~~Pii~Apm~~~~------~~ela~a~a~aGglg~i~--~~~s~e~~~ 81 (404)
T 1eep_A 10 LTFDDVSLIPRKSSVLPSEVSLKTQLTKNISLNIPFLSSAMDTVT------ESQMAIAIAKEGGIGIIH--KNMSIEAQR 81 (404)
T ss_dssp CCGGGEEECCCCCCSCGGGCCCCEESSSSCEESSSEEECCCTTTC------SHHHHHHHHHHTSEEEEC--SSSCHHHHH
T ss_pred CCcccEEEccCCCCcCccccccceeccCCcccCCCEEeCCCCCCC------CHHHHHHHHHCCCEEEEC--CCCCHHHHH
Confidence 58999999999997 789999999999 99999999999999754 557777899999988887 456777664
Q ss_pred hhCCC---------------------------------------------c-----------eEEEEeecCChHHHHHHH
Q 018519 119 STGPG---------------------------------------------I-----------RFFQLYVYKDRNVVAQLV 142 (354)
Q Consensus 119 ~~~~~---------------------------------------------~-----------~~~QLy~~~d~~~~~~~~ 142 (354)
+..+. | ....+. .+.+ ..+.+
T Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~i~--~~~~-~~~~a 158 (404)
T 1eep_A 82 KEIEKVKTYKFQKTINTNGDTNEQKPEIFTAKQHLEKSDAYKNAEHKEDFPNACKDLNNKLRVGAAVS--IDID-TIERV 158 (404)
T ss_dssp HHHHHHHTCC--------------------------------------CCTTCCBCTTSCBCCEEEEC--SCTT-HHHHH
T ss_pred HHHHHHHhhccCCCceeccccccccccccccCCCCCHHHHHHHHHHhhhcchhhhhcccCceEEEEeC--CChh-HHHHH
Confidence 32110 0 011111 1111 34455
Q ss_pred HHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhh-HHHHHhhhcCCcccccccCCHH
Q 018519 143 RRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSG-LAAYVAGQIDRSLSWKGVLTAE 221 (354)
Q Consensus 143 ~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~w~Gi~~~~ 221 (354)
+.+.++|++++.++. +. |. | ....+ ++.+.+.....++...++.+++
T Consensus 159 ~~~~~~G~d~i~i~~--~~-g~-----------~------------------~~~~e~i~~ir~~~~~~pviv~~v~~~~ 206 (404)
T 1eep_A 159 EELVKAHVDILVIDS--AH-GH-----------S------------------TRIIELIKKIKTKYPNLDLIAGNIVTKE 206 (404)
T ss_dssp HHHHHTTCSEEEECC--SC-CS-----------S------------------HHHHHHHHHHHHHCTTCEEEEEEECSHH
T ss_pred HHHHHCCCCEEEEeC--CC-CC-----------h------------------HHHHHHHHHHHHHCCCCeEEEcCCCcHH
Confidence 666667777776642 21 10 0 00011 2222332212222224678999
Q ss_pred HHHHHHHhCCCEEEEecCCcCC------CCCCcChHHHHHHHHHHhc-CCccEEEcCCCCCHHHHHHHHHcCcCEEEEcH
Q 018519 222 DARIAVQAGAAGIIVSNHGARQ------LDYVPATIMALEEVVKATQ-GRIPVFLDGGVRRGTDVFKALALGASGIFIGR 294 (354)
Q Consensus 222 ~a~~~~~~G~d~I~vs~~gg~~------~~~~~~~~~~l~~i~~~~~-~~i~vi~~GGi~~g~dv~kalalGAd~V~igr 294 (354)
+|+.+.++|+|+|+|++++|+- .+++.+.++.+.++.+.+. .++|||++|||+++.|+.|++++|||+|++||
T Consensus 207 ~a~~a~~~Gad~I~vg~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipVia~GGI~~~~d~~~ala~GAd~V~iG~ 286 (404)
T 1eep_A 207 AALDLISVGADCLKVGIGPGSICTTRIVAGVGVPQITAICDVYEACNNTNICIIADGGIRFSGDVVKAIAAGADSVMIGN 286 (404)
T ss_dssp HHHHHHTTTCSEEEECSSCSTTSHHHHHHCCCCCHHHHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHHHHTCSEEEECH
T ss_pred HHHHHHhcCCCEEEECCCCCcCcCccccCCCCcchHHHHHHHHHHHhhcCceEEEECCCCCHHHHHHHHHcCCCHHhhCH
Confidence 9999999999999996555531 1246678888888888664 37999999999999999999999999999999
Q ss_pred HHH--------------------HHHhh-------------------------cCHHH-------HHHHHHHHHHHHHHH
Q 018519 295 PVV--------------------YSLAA-------------------------EGEKG-------VRRVLEMLREEFELA 322 (354)
Q Consensus 295 ~~l--------------------~~~~~-------------------------~G~~g-------v~~~l~~l~~el~~~ 322 (354)
+|+ |+++. .|.++ |.++++.+.+||+..
T Consensus 287 ~~l~~~e~~~~~~~~~g~~~k~~~g~~~~g~~~~g~~~~~~~g~~~~~~~l~~~g~~~~v~~~~~v~~~~~~l~~el~~~ 366 (404)
T 1eep_A 287 LFAGTKESPSEEIIYNGKKFKSYVGMGSISAMKRGSKSRYFQLENNEPKKLVPEGIEGMVPYSGKLKDILTQLKGGLMSG 366 (404)
T ss_dssp HHHTBTTSSSCEEEETTEEEEC------------------------------------CEECCBCHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCCcchhhhCCeEEeecCCCCCHHHHhhccccchhcccccccccccCceeEEeccCCccHHHHHHHHHHHHHHH
Confidence 994 43332 23333 889999999999999
Q ss_pred HHHhCCCChhhhcccceee
Q 018519 323 MALSGCRSLKEITRDHIVT 341 (354)
Q Consensus 323 m~~~G~~~i~~l~~~~l~~ 341 (354)
|.++|+++++||++..+..
T Consensus 367 m~~~G~~~i~~l~~~~~~~ 385 (404)
T 1eep_A 367 MGYLGAATISDLKINSKFV 385 (404)
T ss_dssp HHHHTCSSHHHHHHSCCEE
T ss_pred HHHhCCCCHHHHhhcCcEE
Confidence 9999999999999775543
No 16
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=99.92 E-value=1.4e-23 Score=203.73 Aligned_cols=251 Identities=21% Similarity=0.266 Sum_probs=179.4
Q ss_pred hhcccceeeccccC--CCCCCccceeEc-CeeeccceEecccccccccCChhhHHHHHHHHHcCCcEEecCCCCCCHHHH
Q 018519 41 NAFSRILFRPRILI--DVSKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEV 117 (354)
Q Consensus 41 ~~~~~i~l~pr~l~--~~~~vd~st~l~-g~~l~~Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~s~~~~~~~eei 117 (354)
..||++.|+|+ +. +.+++|++|+|. ++.+..||++|||.+.+ +..+|.++++.|...++.. +.+++++
T Consensus 13 ~~fddv~l~p~-~~~~~~~~vdl~t~l~~~~~l~~Pii~apM~~vt------~~~lA~avA~~GGlgii~~--~~s~e~~ 83 (361)
T 3khj_A 13 LTFEDILLVPN-YSEVLPREVSLETKLTKNVSLKIPLISSAMDTVT------EHLMAVGMARLGGIGIIHK--NMDMESQ 83 (361)
T ss_dssp CCGGGEEECCC-CBCCCGGGCCCCEESSSSCEESSSEEECSSTTTC------SHHHHHHHHHTTCEEEECS--SSCHHHH
T ss_pred CCcceEEEECC-CCCCCHHHccCceecccccccCCCEEeecCCCCC------cHHHHHHHHHcCCCeEEec--CCCHHHH
Confidence 48999999998 44 357899999997 78999999999998765 6689998888887777753 4556543
Q ss_pred H----hh---CCCceEEEEeecCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccC
Q 018519 118 A----ST---GPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLG 190 (354)
Q Consensus 118 ~----~~---~~~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~ 190 (354)
. +. ...+..+++.. .+ .+.++.+.++|++.|.|+. +. |. +. .
T Consensus 84 ~~~I~~vk~~~~~pvga~ig~-~~----~e~a~~l~eaGad~I~ld~--a~-G~-----------~~-----~------- 132 (361)
T 3khj_A 84 VNEVLKVKNSGGLRVGAAIGV-NE----IERAKLLVEAGVDVIVLDS--AH-GH-----------SL-----N------- 132 (361)
T ss_dssp HHHHHHHHHTTCCCCEEEECT-TC----HHHHHHHHHTTCSEEEECC--SC-CS-----------BH-----H-------
T ss_pred HHHHHHHHhccCceEEEEeCC-CH----HHHHHHHHHcCcCeEEEeC--CC-CC-----------cH-----H-------
Confidence 2 21 22456677654 22 5677888899999887753 32 10 00 0
Q ss_pred cCcccchhhHHHHHhhhcCCcccccccCCHHHHHHHHHhCCCEEEEecCCcCC------CCCCcChHHHHHHHHHHhcC-
Q 018519 191 KMDEANDSGLAAYVAGQIDRSLSWKGVLTAEDARIAVQAGAAGIIVSNHGARQ------LDYVPATIMALEEVVKATQG- 263 (354)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~w~Gi~~~~~a~~~~~~G~d~I~vs~~gg~~------~~~~~~~~~~l~~i~~~~~~- 263 (354)
....++++.+.. ..++...++.++++++.+.++|+|+|+|++++|.- ...+.|++..+.++++.+..
T Consensus 133 -----~~~~i~~i~~~~-~~~Vivg~v~t~e~A~~l~~aGaD~I~VG~~~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~ 206 (361)
T 3khj_A 133 -----IIRTLKEIKSKM-NIDVIVGNVVTEEATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKF 206 (361)
T ss_dssp -----HHHHHHHHHHHC-CCEEEEEEECSHHHHHHHHHTTCSEEEECSSCCTTCCHHHHTCBCCCHHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHhc-CCcEEEccCCCHHHHHHHHHcCcCEEEEecCCCcCCCcccccCCCCCcHHHHHHHHHHHhhc
Confidence 001133333333 22222246789999999999999999996554421 23467888888888765432
Q ss_pred CccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHH--------------------HHHhh-------------c-C-----
Q 018519 264 RIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV--------------------YSLAA-------------E-G----- 304 (354)
Q Consensus 264 ~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l--------------------~~~~~-------------~-G----- 304 (354)
++|||++|||+++.|+.|++++|||+|++|++|+ |+++. . +
T Consensus 207 ~iPVIA~GGI~~~~di~kala~GAd~V~vGs~~~~t~Esp~~~~~~~g~~~k~y~gm~s~~a~~~~~~~~y~~~~~~~~~ 286 (361)
T 3khj_A 207 GIPIIADGGIRYSGDIGKALAVGASSVMIGSILAGTEESPGEKELIGDTVYKYYRGMGSVGAMKSGSGDRYFQEKRPENK 286 (361)
T ss_dssp TCCEEEESCCCSHHHHHHHHHHTCSEEEESTTTTTBTTSSCEEEEETTEEEEEC--------------------------
T ss_pred CCeEEEECCCCCHHHHHHHHHcCCCEEEEChhhhcCCcCCcchhhcCCeEEEEeeccchHHHHhccchhhhhcccccccc
Confidence 7999999999999999999999999999999875 23321 0 1
Q ss_pred --HH----------HHHHHHHHHHHHHHHHHHHhCCCChhhhccc
Q 018519 305 --EK----------GVRRVLEMLREEFELAMALSGCRSLKEITRD 337 (354)
Q Consensus 305 --~~----------gv~~~l~~l~~el~~~m~~~G~~~i~~l~~~ 337 (354)
++ .+++++..+...|+..|.++|+.+|+||+..
T Consensus 287 ~~~eg~~~~v~~~g~~~~~~~~~~~gl~~~~~~~g~~~~~~~~~~ 331 (361)
T 3khj_A 287 MVPEGIEGRVKYKGEMEGVVYQLVGGLRSCMGYLGSASIEELWKK 331 (361)
T ss_dssp -------CEEECCBCHHHHHHHHHHHHHHHHHHTTCSSHHHHHHH
T ss_pred cCCCccEEeCCCCCCHHHHHHHHHHHHHHhhhhcCCccHHHHHhC
Confidence 12 2678899999999999999999999999754
No 17
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=99.91 E-value=1.1e-23 Score=229.80 Aligned_cols=285 Identities=19% Similarity=0.172 Sum_probs=190.7
Q ss_pred hHhhcccceeeccccCC--CCCCccceeEcCeeeccceEecccccccccCChhhHHHHHHHHHcCCcEEecCCCCCCHHH
Q 018519 39 NRNAFSRILFRPRILID--VSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEE 116 (354)
Q Consensus 39 N~~~~~~i~l~pr~l~~--~~~vd~st~l~g~~l~~Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~s~~~~~~~ee 116 (354)
....|+++.+.+..+.. ++++++++ ++..||+++||+++.+ +++.+.+||++|++.|+.+.+++. ..+.++
T Consensus 821 ~~~~~~dl~~~~~~l~~i~~~ev~~~~-----~I~~Pf~isaMS~Gal-S~ea~~aLA~Aa~~aGg~~~tGeG-g~~pe~ 893 (1479)
T 1ea0_A 821 PPMQLRDLLELRSTKAPVPVDEVESIT-----AIRKRFITPGMSMGAL-SPEAHGTLNVAMNRIGAKSDSGEG-GEDPAR 893 (1479)
T ss_dssp CCCSGGGGEEECCSSCCCCGGGSCCHH-----HHHTTEEEEECCBTTB-CHHHHHHHHHHHHHTTCEEECCTT-CCCGGG
T ss_pred CCCchhhhhhccCCCCCCCcccccccc-----cccCCeEecCcccccc-CHHHHHHHHHHHHHcCCeeEcCCC-ccCHHH
Confidence 33568888888776643 46677666 5689999999997754 667888999999999999998875 345555
Q ss_pred HHhh--C--CCceEEEEeecCChHHHHHHHHHHHHcCCCEEEEecCCCCC--------CchhHHhhhcc-CCCCcCcccc
Q 018519 117 VAST--G--PGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRL--------GRREADIKNRF-TLPPFLTLKN 183 (354)
Q Consensus 117 i~~~--~--~~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~--------g~r~~~~r~~~-~~p~~~~~~~ 183 (354)
.... . ....+.|+.. .........+ ..++++.|.++.-.+ +.+....-... ..+.+...
T Consensus 894 ~~~~~~g~~~~~~IrQ~as-g~FGVn~~~l-----~~a~~ieIKigQGAKpG~GG~Lp~~kv~~~IA~~R~~~~Gv~l-- 965 (1479)
T 1ea0_A 894 FRPDKNGDNWNSAIKQVAS-GRFGVTAEYL-----NQCRELEIKVAQGAKPGEGGQLPGFKVTEMIARLRHSTPGVML-- 965 (1479)
T ss_dssp SSBCTTSCBCCCSEEEECS-SCTTCCHHHH-----TSCSEEEEECCCTTSTTTCCEECGGGCCHHHHHHHTCCTTCCE--
T ss_pred hhhccccchhhhhhhhhcC-CCCCcChHHc-----cccchHHHHHhccCCCCcCCCCCHHHHHHHHHHHcCCCCCCCc--
Confidence 4311 0 1235678753 3333332322 467889998854222 11211110000 11211110
Q ss_pred ccCCccCcCcccchhh----HHHHHhhhcCCccccccc---CCHHHHHHHHHhCCCEEEEecC-CcCC-------CCCCc
Q 018519 184 FQGLDLGKMDEANDSG----LAAYVAGQIDRSLSWKGV---LTAEDARIAVQAGAAGIIVSNH-GARQ-------LDYVP 248 (354)
Q Consensus 184 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~w~Gi---~~~~~a~~~~~~G~d~I~vs~~-gg~~-------~~~~~ 248 (354)
+.... +.+-..... +.++.+.....++..+.+ ...++|+.+.++|||+|+|+|| ||+. .++|.
T Consensus 966 isP~~--~~d~~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~gi~~~A~~a~~AGAD~IvVsG~eGGTgasp~~~~~~~G~ 1043 (1479)
T 1ea0_A 966 ISPPP--HHDIYSIEDLAQLIYDLKQINPDAKVTVKLVSRSGIGTIAAGVAKANADIILISGNSGGTGASPQTSIKFAGL 1043 (1479)
T ss_dssp ECCSS--CTTCSSHHHHHHHHHHHHHHCTTCEEEEEEECCTTHHHHHHHHHHTTCSEEEEECTTCCCSSEETTHHHHSCC
T ss_pred cCCCC--CcCcCCHHHHHHHHHHHHHhCCCCCEEEEEcCCCChHHHHHHHHHcCCcEEEEcCCCCCCCCCchhhhcCCch
Confidence 10000 000011122 222332221234444433 2478899999999999999999 4431 24678
Q ss_pred ChHHHHHHHHHHh-----cCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHHHHHhh---------------------
Q 018519 249 ATIMALEEVVKAT-----QGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAA--------------------- 302 (354)
Q Consensus 249 ~~~~~l~~i~~~~-----~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l~~~~~--------------------- 302 (354)
|+...|+++.+++ ++++|||++|||+++.|++||++|||++|++||+||+++.|
T Consensus 1044 Pt~~aL~ev~~al~~~glr~~VpVIAdGGIrtG~DVakALaLGAdaV~iGTafL~a~gc~~~r~Ch~~~CP~Gvatqdp~ 1123 (1479)
T 1ea0_A 1044 PWEMGLSEVHQVLTLNRLRHRVRLRTDGGLKTGRDIVIAAMLGAEEFGIGTASLIAMGCIMVRQCHSNTCPVGVCVQDDK 1123 (1479)
T ss_dssp CHHHHHHHHHHHHHTTTCTTTSEEEEESSCCSHHHHHHHHHTTCSEEECCHHHHHHHTCCCCCCTTTTCCTTSSSCCCTT
T ss_pred hHHHHHHHHHHHHHHcCCCCCceEEEECCCCCHHHHHHHHHcCCCeeeEcHHHHHHHHHHHHhhccCCCCCceeEEeCHH
Confidence 8999999999876 34799999999999999999999999999999999998853
Q ss_pred ------cCHHHHHHHHHHHHHHHHHHHHHhCCCChhhh-ccccee
Q 018519 303 ------EGEKGVRRVLEMLREEFELAMALSGCRSLKEI-TRDHIV 340 (354)
Q Consensus 303 ------~G~~gv~~~l~~l~~el~~~m~~~G~~~i~~l-~~~~l~ 340 (354)
.|+++|.++++.+.+||+.+|..+|+++++|| .+.++.
T Consensus 1124 l~~~~~gg~e~V~n~l~~l~~ELr~~Ma~lG~~si~eL~g~~~ll 1168 (1479)
T 1ea0_A 1124 LRQKFVGTPEKVVNLFTFLAEEVREILAGLGFRSLNEVIGRTDLL 1168 (1479)
T ss_dssp GGGSCCCCHHHHHHHHHHHHHHHHHHHHHHTCSCSGGGTTCGGGE
T ss_pred HHhhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCHHHHhCchhee
Confidence 36889999999999999999999999999999 344443
No 18
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=99.91 E-value=4.3e-23 Score=200.27 Aligned_cols=257 Identities=20% Similarity=0.233 Sum_probs=180.0
Q ss_pred hhcccceeecccc-CCCCCCccceeEc-CeeeccceEecccccccccCChhhHHHHHHHHHcCCcEEecCCCCCCHHHHH
Q 018519 41 NAFSRILFRPRIL-IDVSKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA 118 (354)
Q Consensus 41 ~~~~~i~l~pr~l-~~~~~vd~st~l~-g~~l~~Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~s~~~~~~~eei~ 118 (354)
..||++.|+|..- .+.+++|++|+|. .+.+..||+.|||.+.+ +..+|.++++.|...++.. +.+.|++.
T Consensus 14 ~~fddv~lvp~~~~~~~~~vdl~t~lt~~~~l~~Pii~apM~~vs------~~~lA~avA~aGGlg~i~~--~~s~e~~~ 85 (366)
T 4fo4_A 14 LTFDDVLLVPAHSTVLPNTADLRTRLTKNIALNIPMVSASMDTVT------EARLAIALAQEGGIGFIHK--NMSIEQQA 85 (366)
T ss_dssp CCGGGEEECCCCCCCCGGGCBCCEEEETTEEESSSEEECCCTTTC------SHHHHHHHHHTTCEEEECS--SSCHHHHH
T ss_pred CCcceEEEECCCCCCChhhcccceecccccccCCCEEeCCCCCCC------hHHHHHHHHHcCCceEeec--CCCHHHHH
Confidence 4799999999732 2456899999997 68999999999998765 6689999999998888864 35666543
Q ss_pred h----hCC-CceEEEEeecCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCc
Q 018519 119 S----TGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMD 193 (354)
Q Consensus 119 ~----~~~-~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~ 193 (354)
+ ... ++..+.+-...+. ...+.++.+.++|++.|.++. .. |. +..
T Consensus 86 ~~i~~vk~~~~l~vga~vg~~~-~~~~~~~~lieaGvd~I~idt--a~-G~-----------~~~--------------- 135 (366)
T 4fo4_A 86 AQVHQVKISGGLRVGAAVGAAP-GNEERVKALVEAGVDVLLIDS--SH-GH-----------SEG--------------- 135 (366)
T ss_dssp HHHHHHHTTTSCCCEEECCSCT-TCHHHHHHHHHTTCSEEEEEC--SC-TT-----------SHH---------------
T ss_pred HHHHHHHhcCceeEEEEeccCh-hHHHHHHHHHhCCCCEEEEeC--CC-CC-----------CHH---------------
Confidence 2 111 2233333222222 245667888899999988763 21 00 000
Q ss_pred ccchhhHHHHHhhhcCCcccccccCCHHHHHHHHHhCCCEEEEecCCcCC------CCCCcChHHHHHHHHHHhc-CCcc
Q 018519 194 EANDSGLAAYVAGQIDRSLSWKGVLTAEDARIAVQAGAAGIIVSNHGARQ------LDYVPATIMALEEVVKATQ-GRIP 266 (354)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~w~Gi~~~~~a~~~~~~G~d~I~vs~~gg~~------~~~~~~~~~~l~~i~~~~~-~~i~ 266 (354)
....++++.+.....++....+.++++|+.+.++|+|+|+++.++|.. ..++.+.+..|.+++++++ .++|
T Consensus 136 --~~~~I~~ik~~~p~v~Vi~G~v~t~e~A~~a~~aGAD~I~vG~gpGs~~~tr~~~g~g~p~~~~l~~v~~~~~~~~iP 213 (366)
T 4fo4_A 136 --VLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIP 213 (366)
T ss_dssp --HHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCC
T ss_pred --HHHHHHHHHHhcCCCceEeeeeCCHHHHHHHHHcCCCEEEEecCCCCCCCcccccCcccchHHHHHHHHHHHhhcCCe
Confidence 001123333332121222234789999999999999999994333321 1356788999999887653 2799
Q ss_pred EEEcCCCCCHHHHHHHHHcCcCEEEEcHHHHH--------------------HHhh-----c---------C-------H
Q 018519 267 VFLDGGVRRGTDVFKALALGASGIFIGRPVVY--------------------SLAA-----E---------G-------E 305 (354)
Q Consensus 267 vi~~GGi~~g~dv~kalalGAd~V~igr~~l~--------------------~~~~-----~---------G-------~ 305 (354)
||++|||+++.|+.|+|++|||+|++|++|+. +++. + + +
T Consensus 214 VIA~GGI~~~~di~kala~GAd~V~vGs~f~~t~Esp~~~~~~~g~~~k~y~gm~s~~am~~~~~~ry~~~~~~~~~~~~ 293 (366)
T 4fo4_A 214 VIADGGIRFSGDISKAIAAGASCVMVGSMFAGTEEAPGEVILYQGRSYKAYRGMGSLGAMSKGSSDRYFQTDNAADKLVP 293 (366)
T ss_dssp EEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSSSCCEEETTEEEEEEECTTSHHHHCC---------------CCC
T ss_pred EEEeCCCCCHHHHHHHHHcCCCEEEEChHhhcCCCCCchhhhhCCceeEEeeccccHHHHhcccccchhccccccccccC
Confidence 99999999999999999999999999998853 1110 0 0 0
Q ss_pred H----------HHHHHHHHHHHHHHHHHHHhCCCChhhhccc
Q 018519 306 K----------GVRRVLEMLREEFELAMALSGCRSLKEITRD 337 (354)
Q Consensus 306 ~----------gv~~~l~~l~~el~~~m~~~G~~~i~~l~~~ 337 (354)
+ .+++++..+...|+..|.++|+.+|+||++.
T Consensus 294 eg~~~~v~~~g~~~~~~~~~~~glr~~~~y~g~~~~~~~~~~ 335 (366)
T 4fo4_A 294 EGIEGRIAYKGHLKEIIHQQMGGLRSCMGLTGSATVEDLRTK 335 (366)
T ss_dssp SBCEEEEECCBCHHHHHHHHHHHHHHHHHHHTCSBHHHHHHH
T ss_pred CCcEEecCCCCCHHHHHHHHHHHHHHhhhccCcccHHHHHhC
Confidence 1 3678999999999999999999999999753
No 19
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=99.90 E-value=1.9e-22 Score=197.41 Aligned_cols=255 Identities=20% Similarity=0.248 Sum_probs=171.6
Q ss_pred hhcccceeecccc-CCCCCCccceeEc-CeeeccceEecccccccccCChhhHHHHHHHHHcCCcEEecCCCCCCHHHHH
Q 018519 41 NAFSRILFRPRIL-IDVSKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA 118 (354)
Q Consensus 41 ~~~~~i~l~pr~l-~~~~~vd~st~l~-g~~l~~Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~s~~~~~~~eei~ 118 (354)
..||++.|+|... ...+++|++|.|- .+.+..||+.|||++.+ +..||.+.+++|...+++. ..++|+++
T Consensus 10 ~t~ddvll~P~~~~~~~~~v~l~t~lt~~l~l~~PIi~a~M~~Vs------~~~lA~Ava~aGGlGvi~~--~~~~e~~~ 81 (400)
T 3ffs_A 10 LTFEDILLVPNYSEVLPREVSLETKLTKNVSLKIPLISSAMDTVT------EHLMAVGMARLGGIGIIHK--NMDMESQV 81 (400)
T ss_dssp CCGGGEEECCCCBCSCGGGCCCCEESSSSCEESSSEEECSCTTTC------SSHHHHHHHTTTCEEEECS--SSCHHHHH
T ss_pred CCceeEEEecCCCccCHHHccCccchhcccCCCCCEEeCCCCCcC------cHHHHHHHHHCCCEEEeCC--CCCHHHHH
Confidence 3799999999644 3457899999985 57899999999998655 4489999999999999985 56676553
Q ss_pred hh-------CC----CceE--EEEe------------------ecC--C-------------hHHHHHHHHHHHHcCCCE
Q 018519 119 ST-------GP----GIRF--FQLY------------------VYK--D-------------RNVVAQLVRRAERAGFKA 152 (354)
Q Consensus 119 ~~-------~~----~~~~--~QLy------------------~~~--d-------------~~~~~~~~~~a~~~G~~a 152 (354)
+. .. .|+. .+|+ +.. | .+ .+.++.+.++|++.
T Consensus 82 ~~i~~vk~~~~g~~~~P~~~~~nL~~~~~~~~~~~~~~~~~~~p~~~~d~~g~l~v~~~v~~~~--~e~~~~lveaGvdv 159 (400)
T 3ffs_A 82 NEVLKVKNWISNLEKNESTPDQNLDKESTDGKDTKSNNNIDAYSNENLDNKGRLRVGAAIGVNE--IERAKLLVEAGVDV 159 (400)
T ss_dssp HHHHHHHCCC-------------------------------CCTTCCBCTTSSBCCEEEECCC---CHHHHHHHHHTCSE
T ss_pred HHHHHHHhhccCcccCCCCccccccCCCCCHHHHHHHHHhhhCcchhhccccceeEEeecCCCH--HHHHHHHHHcCCCE
Confidence 21 11 1111 2222 100 0 00 35566667778887
Q ss_pred EEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCcccccccCCHHHHHHHHHhCCC
Q 018519 153 IALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKGVLTAEDARIAVQAGAA 232 (354)
Q Consensus 153 i~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~Gi~~~~~a~~~~~~G~d 232 (354)
|+++..... |. .....++++.+....+ +.-.++.+.++|+.++++|+|
T Consensus 160 Ivldta~G~--------------~~-----------------~~~e~I~~ik~~~~i~-Vi~g~V~t~e~A~~a~~aGAD 207 (400)
T 3ffs_A 160 IVLDSAHGH--------------SL-----------------NIIRTLKEIKSKMNID-VIVGNVVTEEATKELIENGAD 207 (400)
T ss_dssp EEECCSCCS--------------BH-----------------HHHHHHHHHHTTCCCE-EEEEEECSHHHHHHHHHTTCS
T ss_pred EEEeCCCCC--------------cc-----------------cHHHHHHHHHhcCCCe-EEEeecCCHHHHHHHHHcCCC
Confidence 766432110 00 0001123333322112 222467899999999999999
Q ss_pred EEEEecCCcC-----CC-CCCcChHHHHHHHHHHhcC-CccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHH--------
Q 018519 233 GIIVSNHGAR-----QL-DYVPATIMALEEVVKATQG-RIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV-------- 297 (354)
Q Consensus 233 ~I~vs~~gg~-----~~-~~~~~~~~~l~~i~~~~~~-~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l-------- 297 (354)
+|++++.+|+ .. ..+.|++..+.+++++++. ++|||++|||+++.|+.|+|++|||+||+|++|+
T Consensus 208 ~I~vG~g~Gs~~~tr~~~g~g~p~~~al~~v~~~~~~~~IPVIA~GGI~~~~di~kalalGAd~V~vGt~f~~t~Es~~~ 287 (400)
T 3ffs_A 208 GIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVMIGSILAGTEESPGE 287 (400)
T ss_dssp EEEECC---------CCSCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHTTTCSEEEECGGGTTBTTSSCC
T ss_pred EEEEeCCCCcCcccccccccchhHHHHHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcCCCEEEEChHHhcCCCCCch
Confidence 9999533332 22 3467889999999887643 7999999999999999999999999999999884
Q ss_pred ------------HHHhhc--------------C-------HHH----------HHHHHHHHHHHHHHHHHHhCCCChhhh
Q 018519 298 ------------YSLAAE--------------G-------EKG----------VRRVLEMLREEFELAMALSGCRSLKEI 334 (354)
Q Consensus 298 ------------~~~~~~--------------G-------~~g----------v~~~l~~l~~el~~~m~~~G~~~i~~l 334 (354)
|+++.. + ++| +++++..+...|+..|.++|+.+|+||
T Consensus 288 ~~~~~g~~~k~y~Gm~s~~am~~~~~~ry~~~~~~~~~~~~eG~~~~v~~~g~~~~~~~~~~~glr~~~~y~G~~~i~el 367 (400)
T 3ffs_A 288 KELIGDTVYKYYRGMGSVGAMKSGSGDRYFQEKRPENKMVPEGIEGRVKYKGEMEGVVYQLVGGLRSCMGYLGSASIEEL 367 (400)
T ss_dssp EEESSSSEEEC-----------------------------------CEECCBCHHHHHHHHHHHHHHHHHHTTCSSHHHH
T ss_pred hhhcCCeeeeeecCcchHHHHhccccchhhcccccccccCCCCcEEecCCCCCHHHHHHHHHHHHHHhhhhcCcccHHHH
Confidence 343210 0 122 678899999999999999999999999
Q ss_pred ccc
Q 018519 335 TRD 337 (354)
Q Consensus 335 ~~~ 337 (354)
+..
T Consensus 368 ~~~ 370 (400)
T 3ffs_A 368 WKK 370 (400)
T ss_dssp HHH
T ss_pred HhC
Confidence 754
No 20
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=99.89 E-value=4.1e-22 Score=217.93 Aligned_cols=281 Identities=18% Similarity=0.126 Sum_probs=186.2
Q ss_pred hhcccceeeccccC--CCCCCccceeEcCeeeccceEecccccccccCChhhHHHHHHHHHcCCcEEecCCCCCCHHHHH
Q 018519 41 NAFSRILFRPRILI--DVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA 118 (354)
Q Consensus 41 ~~~~~i~l~pr~l~--~~~~vd~st~l~g~~l~~Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~s~~~~~~~eei~ 118 (354)
..|+++.+.+..+. ++++++..+ ++..||+++||+++. ..++.+.+||.+|+++|+.+.+++.. .+.++..
T Consensus 840 ~~~r~l~~~~~~~~~i~~~ev~~~~-----~I~~Pfii~aMS~Gs-lS~ea~~aLA~Aas~aGg~~~tGeGg-~~pe~~~ 912 (1520)
T 1ofd_A 840 TALRDLLDFNADQPAISLEEVESVE-----SIVKRFCTGGMSLGA-LSREAHETLAIAMNRLGAKSNSGEGG-EDVVRYL 912 (1520)
T ss_dssp CSGGGGEEECCSSCCCCGGGSCCHH-----HHHTTEECCCBCTTT-SCHHHHHHHHHHHHHHTCBCEECTTC-CCGGGGS
T ss_pred cchhhhccccCCCCCCCchhhcccc-----cccCceEecCcCccc-ccHHHHHHHHHHHHHcCCceEeCCCC-CCHHHHH
Confidence 46778877766554 345666555 568999999999875 35567889999999999999998763 3454442
Q ss_pred -----------hhCC-----------CceEEEEeecCChHHHHHHHHHHHHcCCCEEEEecCCCCC--------CchhH-
Q 018519 119 -----------STGP-----------GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRL--------GRREA- 167 (354)
Q Consensus 119 -----------~~~~-----------~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~--------g~r~~- 167 (354)
..+| ...+.|+- ........+.+. .++.|.|.++.-.+ +.+..
T Consensus 913 ~eir~~~~~~~~~~p~~~~~~nG~~~~~~I~Ql~-sg~FGVn~~~l~-----~ad~IeIKi~QGAKpG~GG~Lp~~kV~~ 986 (1520)
T 1ofd_A 913 TLDDVDSEGNSPTLPHLHGLQNGDTANSAIKQIA-SGRFGVTPEYLM-----SGKQLEIKMAQGAKPGEGGQLPGKKVSE 986 (1520)
T ss_dssp CCCCCCTTSCCTTSTTCCSCCTTCCCCCSEEEEC-TTCTTCCHHHHH-----HCSEEEEECCCTTSTTSCCEECGGGCCH
T ss_pred hhhccccccccccccccccccCcchHHHHHHHhc-CCCCccChhhcc-----chHHHHHHHhccCCCCCCCCCCHHHHHH
Confidence 1111 13577872 122233222222 27888888744322 11111
Q ss_pred ---HhhhccCCCCcCccccccCCccCcCcccchhh----HHHHHhhhcCCccccccc---CCHHHHHHHHHhCCCEEEEe
Q 018519 168 ---DIKNRFTLPPFLTLKNFQGLDLGKMDEANDSG----LAAYVAGQIDRSLSWKGV---LTAEDARIAVQAGAAGIIVS 237 (354)
Q Consensus 168 ---~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~w~Gi---~~~~~a~~~~~~G~d~I~vs 237 (354)
.+| ..+.+... +.... +.+-..... +.++.+.....++..+.+ ...++|..+.++|||+|+|+
T Consensus 987 ~iA~~R---~~~~Gv~l--isP~~--~~d~~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~gi~~~A~~a~kAGAD~IvVs 1059 (1520)
T 1ofd_A 987 YIAMLR---RSKPGVTL--ISPPP--HHDIYSIEDLAQLIYDLHQINPEAQVSVKLVAEIGIGTIAAGVAKANADIIQIS 1059 (1520)
T ss_dssp HHHHHH---TSCTTCCE--ECCSS--CTTCSSHHHHHHHHHHHHHHCTTSEEEEEEECSTTHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHc---CCCCCCCe--eCCCC--CcCcCCHHHHHHHHHHHHHhCCCCCEEEEecCCCChHHHHHHHHHcCCCEEEEe
Confidence 111 11222111 10000 000011122 222332221233444433 24789999999999999999
Q ss_pred cCC-cCC-------CCCCcChHHHHHHHHHHh-----cCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHHHHHhh--
Q 018519 238 NHG-ARQ-------LDYVPATIMALEEVVKAT-----QGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAA-- 302 (354)
Q Consensus 238 ~~g-g~~-------~~~~~~~~~~l~~i~~~~-----~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l~~~~~-- 302 (354)
||+ |+. .++|.|+...|+++.+++ ++++|||++|||+++.|++|||+|||++|++||+||+++.|
T Consensus 1060 G~eGGTgasp~~~~~~~GlPt~~aL~ev~~al~~~glr~~IpVIAdGGIrtG~DVakALaLGAdaV~iGTafL~algc~~ 1139 (1520)
T 1ofd_A 1060 GHDGGTGASPLSSIKHAGSPWELGVTEVHRVLMENQLRDRVLLRADGGLKTGWDVVMAALMGAEEYGFGSIAMIAEGCIM 1139 (1520)
T ss_dssp CTTCCCSSEEHHHHHHBCCCHHHHHHHHHHHHHHTTCGGGCEEEEESSCCSHHHHHHHHHTTCSEEECSHHHHHHTTCCC
T ss_pred CCCCccCCCcchhhcCCchhHHHHHHHHHHHHHhcCCCCCceEEEECCCCCHHHHHHHHHcCCCeeEEcHHHHHHHHHHH
Confidence 995 432 246788999999998876 34799999999999999999999999999999999998754
Q ss_pred -------------------------cCHHHHHHHHHHHHHHHHHHHHHhCCCChhhhc-ccceee
Q 018519 303 -------------------------EGEKGVRRVLEMLREEFELAMALSGCRSLKEIT-RDHIVT 341 (354)
Q Consensus 303 -------------------------~G~~gv~~~l~~l~~el~~~m~~~G~~~i~~l~-~~~l~~ 341 (354)
.|+++|.++++.+.+||+.+|..+|+++++||. +..+..
T Consensus 1140 ~r~Ch~~~CP~Gvatqdp~L~~~~~gg~e~V~n~l~~l~~ELr~~Ma~lG~~si~eL~gr~dll~ 1204 (1520)
T 1ofd_A 1140 ARVCHTNNCPVGVATQQERLRQRFKGVPGQVVNFFYFIAEEVRSLLAHLGYRSLDDIIGRTDLLK 1204 (1520)
T ss_dssp CCCGGGTCCTTSSSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHTCSCGGGTTTCGGGEE
T ss_pred HHhccCCCCCceeEeeCHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHhCcceEEe
Confidence 268899999999999999999999999999994 444443
No 21
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=99.89 E-value=5.8e-22 Score=189.01 Aligned_cols=242 Identities=17% Similarity=0.149 Sum_probs=170.6
Q ss_pred CccceeEcCeeeccceEecccccccccCChhhHHHHHHHHHcCCcEEecCCC---------------------------C
Q 018519 59 IDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWS---------------------------T 111 (354)
Q Consensus 59 vd~st~l~g~~l~~Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~s~~~---------------------------~ 111 (354)
+|++++++|+++++||++|++... . +..+.+.+.+.|+.+++..+. +
T Consensus 2 ~dl~~~i~g~~l~nPi~~Aag~~~----~--~~~~~~~~~~~G~g~v~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~ 75 (314)
T 2e6f_A 2 MCLKLNLLDHVFANPFMNAAGVLC----S--TEEDLRCMTASSSGALVSKSCTSAPRDGNPEPRYMAFPLGSINSMGLPN 75 (314)
T ss_dssp CCCCEEETTEEESSSEEECTTSSC----S--SHHHHHHHHHSSCSCEECCCBCSSCBCCSCSCCEEEETTEEEECCCCCB
T ss_pred CCcceEECCEecCCCcEECCCCCC----C--CHHHHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCC
Confidence 589999999999999999985422 1 345567789999988664321 1
Q ss_pred CCHH----HHHhh-C-C-CceEEEEeecCChHHHHHHHHHHHHcCCC---EEEEecCCCCCCchhHHhhhccCCCCcCcc
Q 018519 112 SSVE----EVAST-G-P-GIRFFQLYVYKDRNVVAQLVRRAERAGFK---AIALTVDTPRLGRREADIKNRFTLPPFLTL 181 (354)
Q Consensus 112 ~~~e----ei~~~-~-~-~~~~~QLy~~~d~~~~~~~~~~a~~~G~~---ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~ 181 (354)
...+ ++.+. . + .+.+.||.. .+.+...+.+++++++|++ +|.||+.||.. .+.+
T Consensus 76 ~g~~~~~~~~~~~~~~~~~p~~~~i~g-~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~-~g~~-------------- 139 (314)
T 2e6f_A 76 LGFDFYLKYASDLHDYSKKPLFLSISG-LSVEENVAMVRRLAPVAQEKGVLLELNLSCPNV-PGKP-------------- 139 (314)
T ss_dssp SCHHHHHHHHHHTCCTTTCCEEEEECC-SSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCS-TTCC--------------
T ss_pred cCHHHHHHHHHHHhhcCCCcEEEEeCC-CCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCC-CCch--------------
Confidence 1122 23332 2 2 678899874 6888889999999999999 99999999974 1100
Q ss_pred ccccCCccCcCcccchhh-HHHHHhhhcCCccccc-ccCCHHH----HHHHHHhC-CCEEEEecCCcC--CCC-------
Q 018519 182 KNFQGLDLGKMDEANDSG-LAAYVAGQIDRSLSWK-GVLTAED----ARIAVQAG-AAGIIVSNHGAR--QLD------- 245 (354)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~w~-Gi~~~~~----a~~~~~~G-~d~I~vs~~gg~--~~~------- 245 (354)
.+.. .+ ....+ ++++.+....|.+..- .-.+.++ ++.+.++| +|+|+++|+.++ ..+
T Consensus 140 -~~g~----~~--~~~~~ii~~vr~~~~~Pv~vK~~~~~~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~ 212 (314)
T 2e6f_A 140 -QVAY----DF--EAMRTYLQQVSLAYGLPFGVKMPPYFDIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVV 212 (314)
T ss_dssp -CGGG----SH--HHHHHHHHHHHHHHCSCEEEEECCCCCHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEES
T ss_pred -hhcC----CH--HHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcc
Confidence 0000 00 01112 2333333333433222 1135555 78889999 999999886531 110
Q ss_pred ----------CC----cChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHHHHHhhcCHHHHHHH
Q 018519 246 ----------YV----PATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRV 311 (354)
Q Consensus 246 ----------~~----~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l~~~~~~G~~gv~~~ 311 (354)
.+ +..++.+.++++.+ +++|||++|||+|++|+.+++++|||+|++||++++ +|+ .+
T Consensus 213 ~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~-~~ipvi~~GGI~~~~da~~~l~~GAd~V~ig~~~l~----~~p----~~ 283 (314)
T 2e6f_A 213 IKPKQGFGGLGGKYILPTALANVNAFYRRC-PDKLVFGCGGVYSGEDAFLHILAGASMVQVGTALQE----EGP----GI 283 (314)
T ss_dssp CCGGGGEEEEESGGGHHHHHHHHHHHHHHC-TTSEEEEESSCCSHHHHHHHHHHTCSSEEECHHHHH----HCT----TH
T ss_pred cccCcCCCccCcccccHHHHHHHHHHHHhc-CCCCEEEECCCCCHHHHHHHHHcCCCEEEEchhhHh----cCc----HH
Confidence 12 12367888888887 589999999999999999999999999999999997 243 37
Q ss_pred HHHHHHHHHHHHHHhCCCChhhhcccc
Q 018519 312 LEMLREEFELAMALSGCRSLKEITRDH 338 (354)
Q Consensus 312 l~~l~~el~~~m~~~G~~~i~~l~~~~ 338 (354)
++.+.++++.+|...|+++++|+++..
T Consensus 284 ~~~i~~~l~~~~~~~g~~~i~~~~g~~ 310 (314)
T 2e6f_A 284 FTRLEDELLEIMARKGYRTLEEFRGRV 310 (314)
T ss_dssp HHHHHHHHHHHHHHHTCCSSTTTTTCC
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHhchH
Confidence 889999999999999999999998754
No 22
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=99.88 E-value=4.4e-23 Score=197.38 Aligned_cols=242 Identities=19% Similarity=0.222 Sum_probs=168.5
Q ss_pred eeccceEecccccccccCChhhHHHHHHHHHcCCcEEecCCCCC------CHHHHHh-h--CCCceEEEEeecCChHHHH
Q 018519 69 KISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTS------SVEEVAS-T--GPGIRFFQLYVYKDRNVVA 139 (354)
Q Consensus 69 ~l~~Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~s~~~~~------~~eei~~-~--~~~~~~~QLy~~~d~~~~~ 139 (354)
+++.||++|||++.+ +.++++.+++.|..++++++.+. ..+.+.. . ...+.++||+ ..+++...
T Consensus 2 ~l~nri~~APM~~~t------~~~~r~~~~~~G~gli~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~QL~-g~~~~~~~ 74 (318)
T 1vhn_A 2 SLEVKVGLAPMAGYT------DSAFRTLAFEWGADFAFSEMVSAKGFLMNSQKTEELLPQPHERNVAVQIF-GSEPNELS 74 (318)
T ss_dssp ---CEEEECCCTTTC------SHHHHHHHHTTTCCCEECSCEEHHHHHTTCHHHHHHSCCTTCTTEEEEEE-CSCHHHHH
T ss_pred ccCCCEEECCCCCCC------cHHHHHHHHHHCcCEEEeCCEEEcccccCCHhHHHhhhCcCCCeEEEEeC-CCCHHHHH
Confidence 567899999998654 57899999999999999887431 1111111 1 2268999998 57899999
Q ss_pred HHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhh-HHHHHhhhcCCc-----cc
Q 018519 140 QLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSG-LAAYVAGQIDRS-----LS 213 (354)
Q Consensus 140 ~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~ 213 (354)
+.+++++++ +++|+||++||....|. .++ +.....+. ....+ +.++.+....|. .+
T Consensus 75 ~aa~~a~~~-~d~Iein~gcP~~~~r~----~~~------G~~l~~~~-------~~~~eiv~~v~~~~~~pv~vKir~G 136 (318)
T 1vhn_A 75 EAARILSEK-YKWIDLNAGCPVRKVVK----EGA------GGALLKDL-------RHFRYIVRELRKSVSGKFSVKTRLG 136 (318)
T ss_dssp HHHHHHTTT-CSEEEEEECCCCHHHHH----TTC------GGGGGSCH-------HHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred HHHHHHHHh-CCEEEEECCCCcHhcCC----CCc------ccchhhCH-------HHHHHHHHHHHHhhCCCEEEEecCC
Confidence 999999999 99999999999842221 111 11111110 01112 222333222221 13
Q ss_pred ccccCCHHHHHHHHHhCCCEEEEecCCcCCC--CCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHH-cCcCEE
Q 018519 214 WKGVLTAEDARIAVQAGAAGIIVSNHGARQL--DYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA-LGASGI 290 (354)
Q Consensus 214 w~Gi~~~~~a~~~~~~G~d~I~vs~~gg~~~--~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kala-lGAd~V 290 (354)
|+.-...+.++.+.++|+|+|+| ||+++. ..+++.++.+.++++ ++|||++|||+|++|+.++++ .|||+|
T Consensus 137 ~~~~~~~~~a~~l~~~G~d~i~v--~g~~~~~~~~~~~~~~~i~~i~~----~ipVi~~GgI~s~~da~~~l~~~gad~V 210 (318)
T 1vhn_A 137 WEKNEVEEIYRILVEEGVDEVFI--HTRTVVQSFTGRAEWKALSVLEK----RIPTFVSGDIFTPEDAKRALEESGCDGL 210 (318)
T ss_dssp SSSCCHHHHHHHHHHTTCCEEEE--ESSCTTTTTSSCCCGGGGGGSCC----SSCEEEESSCCSHHHHHHHHHHHCCSEE
T ss_pred CChHHHHHHHHHHHHhCCCEEEE--cCCCccccCCCCcCHHHHHHHHc----CCeEEEECCcCCHHHHHHHHHcCCCCEE
Confidence 33212348899999999999999 555533 346677776665554 799999999999999999999 899999
Q ss_pred EEcHHH-----HHHHhhc----CH---HHHHHHHHHHHHHHHHHHHHhCCC-Chhhhcccceee
Q 018519 291 FIGRPV-----VYSLAAE----GE---KGVRRVLEMLREEFELAMALSGCR-SLKEITRDHIVT 341 (354)
Q Consensus 291 ~igr~~-----l~~~~~~----G~---~gv~~~l~~l~~el~~~m~~~G~~-~i~~l~~~~l~~ 341 (354)
|+||++ ++..... |. .++.++++.+.++++..|.+.|.. .+.+++++..+.
T Consensus 211 ~iGR~~l~~P~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 274 (318)
T 1vhn_A 211 LVARGAIGRPWIFKQIKDFLRSGKYSEPSREEILRTFERHLELLIKTKGERKAVVEMRKFLAGY 274 (318)
T ss_dssp EESGGGTTCTTHHHHHHHHHHHSCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHTTHHHH
T ss_pred EECHHHHhCcchHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Confidence 999965 4444332 43 467889999999999999999975 788888876554
No 23
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=99.88 E-value=3e-21 Score=183.81 Aligned_cols=240 Identities=18% Similarity=0.154 Sum_probs=167.8
Q ss_pred cceeEcCeeeccceEecccccccccCChhhHHHHHHHHHcCCcEEecCCCCC-------C--------------------
Q 018519 61 MNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTS-------S-------------------- 113 (354)
Q Consensus 61 ~st~l~g~~l~~Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~s~~~~~-------~-------------------- 113 (354)
++++++|.++++||++||... +. +..+.+.+.+.|..+++..+.+. .
T Consensus 2 l~~~i~g~~l~npv~~Aag~~----~~--~~~~~~~~~~~G~g~i~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g 75 (311)
T 1jub_A 2 LNTTFANAKFANPFMNASGVH----CM--TIEDLEELKASQAGAYITKSSTLEKREGNPLPRYVDLELGSINSMGLPNLG 75 (311)
T ss_dssp CCEEETTEEESSSEEECTTSS----CS--SHHHHHHHHHSSCSCCBCCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSC
T ss_pred CceEECCEEcCCCcEECCCCC----CC--CHHHHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCcc
Confidence 689999999999999997321 22 45777889999998887544211 1
Q ss_pred HH----HHHh---hC--CCceEEEEeecCChHHHHHHHHHHHHcCCC-EEEEecCCCCCCchhHHhhhccCCCCcCcccc
Q 018519 114 VE----EVAS---TG--PGIRFFQLYVYKDRNVVAQLVRRAERAGFK-AIALTVDTPRLGRREADIKNRFTLPPFLTLKN 183 (354)
Q Consensus 114 ~e----ei~~---~~--~~~~~~QLy~~~d~~~~~~~~~~a~~~G~~-ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~ 183 (354)
.+ ++.+ .. ..+.++||.. .+.+...+.+++++++|++ +|++|++||.. .+. ..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~p~~~~i~g-~~~~~~~~~a~~~~~~g~d~~iein~~~P~~-~g~---------------~~ 138 (311)
T 1jub_A 76 FDYYLDYVLKNQKENAQEGPIFFSIAG-MSAAENIAMLKKIQESDFSGITELNLSCPNV-PGE---------------PQ 138 (311)
T ss_dssp HHHHHHHHHHHHHHTCSSSCCEEEECC-SSHHHHHHHHHHHHHSCCCSEEEEESCCCCS-SSC---------------CC
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEcCC-CCHHHHHHHHHHHHhcCCCeEEEEeccCCCC-CCc---------------cc
Confidence 22 2322 23 3578899874 6888899999999999999 99999999974 110 00
Q ss_pred ccCCccCcCcccchhhH-HHHHhhhcCCccccc--ccCCHH----HHHHHHHhCCCEEEEecCCc--CCCC---------
Q 018519 184 FQGLDLGKMDEANDSGL-AAYVAGQIDRSLSWK--GVLTAE----DARIAVQAGAAGIIVSNHGA--RQLD--------- 245 (354)
Q Consensus 184 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~w~--Gi~~~~----~a~~~~~~G~d~I~vs~~gg--~~~~--------- 245 (354)
+.. . .....++ .++.+....|.+..- + .+.+ .|+.+.++|+|+|+++|+.+ .+.+
T Consensus 139 ~g~----~--~e~~~~iv~~vr~~~~~Pv~vKi~~~-~~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~ 211 (311)
T 1jub_A 139 LAY----D--FEATEKLLKEVFTFFTKPLGVKLPPY-FDLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIK 211 (311)
T ss_dssp GGG----C--HHHHHHHHHHHTTTCCSCEEEEECCC-CSHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCS
T ss_pred ccC----C--HHHHHHHHHHHHHhcCCCEEEEECCC-CCHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccc
Confidence 100 0 0011122 222222222332211 2 2333 37888999999999988742 1111
Q ss_pred --------CCcC----hHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHHHHHhhcCHHHHHHHHH
Q 018519 246 --------YVPA----TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLE 313 (354)
Q Consensus 246 --------~~~~----~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l~~~~~~G~~gv~~~l~ 313 (354)
.+++ .++.+.++++.+++++|||++|||++++|+.+++++|||+|++||++++ .|+ .+++
T Consensus 212 ~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~vg~~~l~----~~p----~~~~ 283 (311)
T 1jub_A 212 PKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGTGGIETGQDAFEHLLCGATMLQIGTALHK----EGP----AIFD 283 (311)
T ss_dssp GGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHH----HCT----HHHH
T ss_pred cCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEchHHHh----cCc----HHHH
Confidence 0222 3667888887776689999999999999999999999999999999997 243 3788
Q ss_pred HHHHHHHHHHHHhCCCChhhhcccc
Q 018519 314 MLREEFELAMALSGCRSLKEITRDH 338 (354)
Q Consensus 314 ~l~~el~~~m~~~G~~~i~~l~~~~ 338 (354)
.+.++++.+|...|+++++|+++..
T Consensus 284 ~i~~~l~~~l~~~g~~si~e~~g~~ 308 (311)
T 1jub_A 284 RIIKELEEIMNQKGYQSIADFHGKL 308 (311)
T ss_dssp HHHHHHHHHHHHHTCCSGGGTTTCC
T ss_pred HHHHHHHHHHHHcCCCCHHHHhChh
Confidence 9999999999999999999998753
No 24
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.88 E-value=3.6e-21 Score=209.75 Aligned_cols=250 Identities=20% Similarity=0.201 Sum_probs=177.9
Q ss_pred CCCCCCccceeEcCeeeccceEecccccccccCChhhHHHHHHHHHcCCcEEecC-CC-------CC-------------
Q 018519 54 IDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSS-WS-------TS------------- 112 (354)
Q Consensus 54 ~~~~~vd~st~l~g~~l~~Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~s~-~~-------~~------------- 112 (354)
..+.++|++++++|+++++||++|||++.. +.++++.+.+.|..+++.. .. +.
T Consensus 526 ~ev~~v~ls~~~~G~~~~nPv~lAa~~~~~------~~~~~~~~~~~g~G~vv~~t~~~~~~~~gn~~pr~~~~~~~g~~ 599 (1025)
T 1gte_A 526 TPVDLVDISVEMAGLKFINPFGLASAAPTT------SSSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIVRGTTSGPM 599 (1025)
T ss_dssp CGGGGCCCCEEETTEEESSSEEECSSGGGS------SHHHHHHHHHHTCSEEECCCBCCGGGCCCCCSSCEEECCTTCSC
T ss_pred cccccccceeeeccccccCcccccCCCCCC------CHHHHHHHHHCCcCeEEeceecccccccCCCCccEEeccccccc
Confidence 356889999999999999999999998654 5678888898898887611 11 00
Q ss_pred -----------------C-------HHHHHhhCC-CceEEEEeecCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhH
Q 018519 113 -----------------S-------VEEVASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREA 167 (354)
Q Consensus 113 -----------------~-------~eei~~~~~-~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~ 167 (354)
. ++++++..| .+.++|++...+.+...+.+++++++|+++|.||++||.. .+.+
T Consensus 600 ~~~~~~~~~n~e~~~~~~~~~~~~~i~~~~~~~~~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~-~~~~ 678 (1025)
T 1gte_A 600 YGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHG-MGER 678 (1025)
T ss_dssp CSSCCSCEEECCCSCSSCHHHHHHHHHHHHHHCTTSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCC-CC--
T ss_pred cCCchhheeeeccccchhHHHHHHHHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCC-CCCC
Confidence 1 123344454 6889999777889999999999999999999999999974 1111
Q ss_pred HhhhccCCCCcCccccccCCccCcCcccchhhH-HHHHhhhcCCccccc--ccC-CHHHHHHHHHhCCCEEEEecC----
Q 018519 168 DIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGL-AAYVAGQIDRSLSWK--GVL-TAEDARIAVQAGAAGIIVSNH---- 239 (354)
Q Consensus 168 ~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~w~--Gi~-~~~~a~~~~~~G~d~I~vs~~---- 239 (354)
+.+.....+. .....+ ..+.+....|.+.+- ++. ..+.|+.+.++|+|+|+++|+
T Consensus 679 ----------~~G~~~~~~~-------~~~~~iv~~v~~~~~~Pv~vK~~~~~~~~~~~a~~~~~~G~d~i~v~Nt~~~~ 741 (1025)
T 1gte_A 679 ----------GMGLACGQDP-------ELVRNICRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGL 741 (1025)
T ss_dssp -------------SBGGGCH-------HHHHHHHHHHHHHCSSCEEEEECSCSSCHHHHHHHHHHHTCSEEEECCCEEEC
T ss_pred ----------CcccccccCH-------HHHHHHHHHHHHhhCCceEEEeCCChHHHHHHHHHHHHcCCCEEEEecccccc
Confidence 1111111110 111222 222222233333221 222 366799999999999999873
Q ss_pred ----------------CcCCC--CCCcCh----HHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHH
Q 018519 240 ----------------GARQL--DYVPAT----IMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 297 (354)
Q Consensus 240 ----------------gg~~~--~~~~~~----~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l 297 (354)
|++.. ..+++. ++.+.++++.+ +++|||++|||+|++|+.++|++|||+|++||+++
T Consensus 742 ~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~~-~~ipvi~~GGI~s~~da~~~l~~Ga~~v~vg~~~l 820 (1025)
T 1gte_A 742 MGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARAL-PGFPILATGGIDSAESGLQFLHSGASVLQVCSAVQ 820 (1025)
T ss_dssp CCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHHS-TTCCEEEESSCCSHHHHHHHHHTTCSEEEESHHHH
T ss_pred ccccccccccccccccccccCCCCCcccchhHHHHHHHHHHHHc-CCCCEEEecCcCCHHHHHHHHHcCCCEEEEeeccc
Confidence 33221 123333 46788888877 46999999999999999999999999999999998
Q ss_pred HHHhhcCHHHHHHHHHHHHHHHHHHHHHhCCCChhhhcc
Q 018519 298 YSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITR 336 (354)
Q Consensus 298 ~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~i~~l~~ 336 (354)
+ .+. .+++.+.+||+.+|...|+.++.++..
T Consensus 821 ~----~~~----~~~~~~~~~l~~~l~~~G~~~i~~l~g 851 (1025)
T 1gte_A 821 N----QDF----TVIQDYCTGLKALLYLKSIEELQGWDG 851 (1025)
T ss_dssp T----SCT----THHHHHHHHHHHHHHHTTCGGGTTSBT
T ss_pred c----CCc----cHHHHHHHHHHHHHHHcCCCCHHHHhC
Confidence 6 233 367889999999999999999999986
No 25
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.86 E-value=1.8e-20 Score=186.73 Aligned_cols=123 Identities=23% Similarity=0.322 Sum_probs=100.5
Q ss_pred cccCCHHHHHHHHHhCCCEEEEecCCcC------CCCCCcChHHHHHHHHHHhcC-CccEEEcCCCCCHHHHHHHHHcCc
Q 018519 215 KGVLTAEDARIAVQAGAAGIIVSNHGAR------QLDYVPATIMALEEVVKATQG-RIPVFLDGGVRRGTDVFKALALGA 287 (354)
Q Consensus 215 ~Gi~~~~~a~~~~~~G~d~I~vs~~gg~------~~~~~~~~~~~l~~i~~~~~~-~i~vi~~GGi~~g~dv~kalalGA 287 (354)
.+|.+.+.++.++++|||+|.|.-.+|. ....|.|.+.++.+++++.++ .+|||+||||+++.|++|||++||
T Consensus 328 GNVaT~e~a~~Li~aGAD~vkVGiGpGSiCtTr~v~GvG~PQ~tAi~~~a~~a~~~~vpvIADGGI~~sGDi~KAlaaGA 407 (556)
T 4af0_A 328 GNVVTREQAAQLIAAGADGLRIGMGSGSICITQEVMAVGRPQGTAVYAVAEFASRFGIPCIADGGIGNIGHIAKALALGA 407 (556)
T ss_dssp EEECSHHHHHHHHHHTCSEEEECSSCSTTBCCTTTCCSCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTC
T ss_pred ccccCHHHHHHHHHcCCCEEeecCCCCcccccccccCCCCcHHHHHHHHHHHHHHcCCCEEecCCcCcchHHHHHhhcCC
Confidence 3688999999999999999999655452 123478999999999887654 699999999999999999999999
Q ss_pred CEEEEcHHHH--------------------HHHhh-----c----------------------------------CH---
Q 018519 288 SGIFIGRPVV--------------------YSLAA-----E----------------------------------GE--- 305 (354)
Q Consensus 288 d~V~igr~~l--------------------~~~~~-----~----------------------------------G~--- 305 (354)
|+||+|+.|- |+++. + |.
T Consensus 408 d~VMlGsllAGt~EsPGe~~~~~G~~~K~YrGMgS~~Am~~~~~~~~~~~~~~~~~~~~s~dRyfq~~~~~~v~EGveg~ 487 (556)
T 4af0_A 408 SAVMMGGLLAGTTESPGEYFYHEGKRVKVYRGMGSIEAMEHTQRGSASGKRSILGLDNAATARYFSEADAVKVAQGVSGD 487 (556)
T ss_dssp SEEEESTTTTTBTTSSSCCEEETTEEEEEEECTTSHHHHTTC------------CCSCSSEEECCCBSSSSCBCCBCEEE
T ss_pred CEEEEchhhccccCCCCcEEEECCEEEEeecccccHHHHHhcccCCcccccccccccccchhhhcccccccccCCccEEe
Confidence 9999999772 11111 0 00
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHhCCCChhhhccc
Q 018519 306 ----KGVRRVLEMLREEFELAMALSGCRSLKEITRD 337 (354)
Q Consensus 306 ----~gv~~~l~~l~~el~~~m~~~G~~~i~~l~~~ 337 (354)
..+++++..|...|+..|.++|+.+|+||+..
T Consensus 488 VpykG~v~~~i~~l~gGlrs~m~y~Ga~~i~el~~~ 523 (556)
T 4af0_A 488 VADKGSINKFVPYLFTGLQHSLQDAAIKSVSELHSC 523 (556)
T ss_dssp EECCBCHHHHHHHHHHHHHHHHHHTTCSSHHHHHHH
T ss_pred ccCCCcHHHHHHHHHHHHHHhhhccCCCcHHHHHHh
Confidence 12788999999999999999999999999864
No 26
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=99.86 E-value=1.3e-20 Score=182.00 Aligned_cols=253 Identities=16% Similarity=0.076 Sum_probs=164.9
Q ss_pred eccccCCCCCCccceeEcCeeeccceEecccccccccCChhhHHHHHHHHHcCCcEEe-cCCC-----------------
Q 018519 49 RPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL-SSWS----------------- 110 (354)
Q Consensus 49 ~pr~l~~~~~vd~st~l~g~~l~~Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~-s~~~----------------- 110 (354)
-|+.-..++++|++++++|++|+.||++|.=.... +....+.+...|..+++ .+..
T Consensus 25 ~~~~~~~~~~~~L~~~~~Gl~~~NPv~lAAG~~~~------~~e~~~~l~~~G~G~v~~ktvt~~pq~GNp~PR~~~~~~ 98 (354)
T 4ef8_A 25 TGGQQMGRGSMSLQVNLLNNTFANPFMNAAGVMCT------TTEELVAMTESASGSLVSKSCTPALREGNPTPRYQALPL 98 (354)
T ss_dssp ---------CCCCCEEETTEEESSSEEECTTSSCS------SHHHHHHHHHSSCSCEEEEEECSSCBCCSCSCCEEEETT
T ss_pred CchhhcCCCCCCcceEECCEECCCCCEeccCCCCC------CHHHHHHHHHcCCCeEEeCcccCcccCCCCCCcEEecch
Confidence 34444567889999999999999999998743211 45677778888876554 2111
Q ss_pred ---------CCCHH----HHHhh--CC-CceEEEEeecCChHHHHHHHHHHH---HcCCCEEEEecCCCCCCchhHHhhh
Q 018519 111 ---------TSSVE----EVAST--GP-GIRFFQLYVYKDRNVVAQLVRRAE---RAGFKAIALTVDTPRLGRREADIKN 171 (354)
Q Consensus 111 ---------~~~~e----ei~~~--~~-~~~~~QLy~~~d~~~~~~~~~~a~---~~G~~ai~i~vd~p~~g~r~~~~r~ 171 (354)
+..++ ++.+. .+ .|.++||+. .+.+...+.+++++ +.|+++|+||++||..
T Consensus 99 ~~iN~~G~~n~G~~~~~~~l~~~~~~~~~pvivsI~G-~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~--------- 168 (354)
T 4ef8_A 99 GSINSMGLPNNGFDFYLAYAAEQHDYGKKPLFLSMSG-LSMRENVEMCKRLAAVATEKGVILELNLSCPNV--------- 168 (354)
T ss_dssp EEEECCCCCBCCHHHHHHHHHHTCCTTTCCEEEEECC-SSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCS---------
T ss_pred hhhccCCCCCcCHHHHHHHHHHHhhcCCCcEEEEecc-CCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCC---------
Confidence 11233 33332 12 578999975 68888888888888 5799999999999973
Q ss_pred ccCCCCcCccccccCCccCcCcccchhhH-HHHHhhhcCCccccc--ccCCH---HHHHHHHHhC-CCEEEEecCC----
Q 018519 172 RFTLPPFLTLKNFQGLDLGKMDEANDSGL-AAYVAGQIDRSLSWK--GVLTA---EDARIAVQAG-AAGIIVSNHG---- 240 (354)
Q Consensus 172 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~w~--Gi~~~---~~a~~~~~~G-~d~I~vs~~g---- 240 (354)
| + ......+ .....++ +.+.+....|.+.+- +.... +.++.+.++| +|+|+++|+-
T Consensus 169 ----~-g-g~~l~~~-------~e~~~~il~av~~~~~~PV~vKi~p~~d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~ 235 (354)
T 4ef8_A 169 ----P-G-KPQVAYD-------FDAMRQCLTAVSEVYPHSFGVKMPPYFDFAHFDAAAEILNEFPKVQFITCINSIGNGL 235 (354)
T ss_dssp ----T-T-SCCGGGS-------HHHHHHHHHHHHHHCCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEECCCEEEEE
T ss_pred ----C-C-chhhccC-------HHHHHHHHHHHHHhhCCCeEEEecCCCCHHHHHHHHHHHHhCCCccEEEEecccCcce
Confidence 1 1 0111101 0112222 222222233432221 32111 2234445887 9999987753
Q ss_pred ------cC------CCCC---C----cChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHHHHHh
Q 018519 241 ------AR------QLDY---V----PATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLA 301 (354)
Q Consensus 241 ------g~------~~~~---~----~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l~~~~ 301 (354)
.+ +..+ | +..++.+.++++.. .++|||++|||+|++|+.+++++|||+||+||++++
T Consensus 236 ~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~-~~ipII~~GGI~s~~da~~~l~aGAd~V~vgra~l~--- 311 (354)
T 4ef8_A 236 VIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRC-PGKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQE--- 311 (354)
T ss_dssp CEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHC-TTSEEEEESCCCSHHHHHHHHHHTEEEEEECHHHHH---
T ss_pred eeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHhC-CCCCEEEECCcCCHHHHHHHHHcCCCEEEEhHHHHH---
Confidence 11 0111 2 23577888888873 479999999999999999999999999999999987
Q ss_pred hcCHHHHHHHHHHHHHHHHHHHHHhCCCChhhhcccce
Q 018519 302 AEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHI 339 (354)
Q Consensus 302 ~~G~~gv~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l 339 (354)
+|+. +++.+.++|+.+|...|+++++|+++..-
T Consensus 312 -~GP~----~~~~i~~~l~~~m~~~G~~si~el~G~~~ 344 (354)
T 4ef8_A 312 -EGPS----IFERLTSELLGVMAKKRYQTLDEFRGKVR 344 (354)
T ss_dssp -HCTT----HHHHHHHHHHHHHHHHTCCSGGGTTTCCB
T ss_pred -hCHH----HHHHHHHHHHHHHHHcCCCCHHHHHHHHh
Confidence 3443 78889999999999999999999987643
No 27
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=99.85 E-value=2.3e-20 Score=177.24 Aligned_cols=243 Identities=16% Similarity=0.127 Sum_probs=161.2
Q ss_pred CCCCccceeEcCeeeccceEecc-cccccccCChhhHHHHHHHHHcCCcEEe-------------------------cCC
Q 018519 56 VSKIDMNTTVLGFKISMPIMIAP-TAMQKMAHPEGEYATARAASAAGTIMTL-------------------------SSW 109 (354)
Q Consensus 56 ~~~vd~st~l~g~~l~~Pi~iAP-m~~~~l~~~~~e~~la~aa~~~G~~~~~-------------------------s~~ 109 (354)
.+++|++++|+|++++.||++|| |.+.+ + .+.+.+.+.|..+++ +..
T Consensus 2 ~~~~~l~~~~~g~~l~npi~~aag~~~~~------~-~~~~~~~~~g~G~~~~~si~~~p~~g~~~p~l~~~~~g~~~~~ 74 (311)
T 1ep3_A 2 TENNRLSVKLPGLDLKNPIIPASGCFGFG------E-EYAKYYDLNKLGSIMVKATTLHPRFGNPTPRVAETASGMLNAI 74 (311)
T ss_dssp CCCTTTCEEETTEEESSSEEECTTSSTTS------T-TGGGTSCGGGSSCEEEEEECSSCBCCCCSCCEEEETTEEEECC
T ss_pred CCCCccceEECCEECCCCcEECCCCCCCC------H-HHHHHHHhcCCCEEEeCeeccCccCCCCCCeEEECCccccccc
Confidence 36899999999999999999999 54432 1 233443333333332 222
Q ss_pred --CCCCHHHH--------HhhC-CCceEEEEeecCChHHHHHHHHHHHH-cCCCEEEEecCCCCCCchhHHhhhccCCCC
Q 018519 110 --STSSVEEV--------ASTG-PGIRFFQLYVYKDRNVVAQLVRRAER-AGFKAIALTVDTPRLGRREADIKNRFTLPP 177 (354)
Q Consensus 110 --~~~~~eei--------~~~~-~~~~~~QLy~~~d~~~~~~~~~~a~~-~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~ 177 (354)
.+.+.+++ .+.. ..+.++||+. .+.+...+.++++++ +|+++|.||+.||..-.+ +
T Consensus 75 g~~~~~~~~~~~~~~~~~~~~~~~~p~~v~l~~-~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g------~----- 142 (311)
T 1ep3_A 75 GLQNPGLEVIMTEKLPWLNENFPELPIIANVAG-SEEADYVAVCAKIGDAANVKAIELNISCPNVKHG------G----- 142 (311)
T ss_dssp CCCBCCHHHHHHTHHHHHHHHCTTSCEEEEECC-SSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGT------T-----
T ss_pred CCCCcCHHHHHHHHHHHHHhcCCCCcEEEEEcC-CCHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCc------h-----
Confidence 12233332 2214 3678999975 567888888888888 899999999999963100 0
Q ss_pred cCccccccCCccCcCcccchhh-HHHHHhhhcCCccccc--ccCC-HHHHHHHHHhCCCEEEEec-------CCcCCC--
Q 018519 178 FLTLKNFQGLDLGKMDEANDSG-LAAYVAGQIDRSLSWK--GVLT-AEDARIAVQAGAAGIIVSN-------HGARQL-- 244 (354)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~w~--Gi~~-~~~a~~~~~~G~d~I~vs~-------~gg~~~-- 244 (354)
.....+. ....+ ++++.+....|.+..- ++.+ .+.++.+.++|+|+|+++| |+.+..
T Consensus 143 ---~~~g~~~-------~~~~eii~~v~~~~~~pv~vk~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~ 212 (311)
T 1ep3_A 143 ---QAFGTDP-------EVAAALVKACKAVSKVPLYVKLSPNVTDIVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPI 212 (311)
T ss_dssp ---EEGGGCH-------HHHHHHHHHHHHHCSSCEEEEECSCSSCSHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBS
T ss_pred ---hhhcCCH-------HHHHHHHHHHHHhcCCCEEEEECCChHHHHHHHHHHHHcCCCEEEEeCCCcccccCcccCCcc
Confidence 0000000 01112 2233332233332111 3333 5669999999999999987 331110
Q ss_pred -------CCCcCh----HHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHHHHHhhcCHHHHHHHHH
Q 018519 245 -------DYVPAT----IMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLE 313 (354)
Q Consensus 245 -------~~~~~~----~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l~~~~~~G~~gv~~~l~ 313 (354)
..+++. ++.+.++++.+ ++|||++|||++++|+.+++++|||+|++||+++. +++ .++
T Consensus 213 ~~~~~~g~~g~~~~~~~~~~i~~i~~~~--~ipvia~GGI~~~~d~~~~l~~GAd~V~vg~~~l~-----~p~----~~~ 281 (311)
T 1ep3_A 213 LANITGGLSGPAIKPVALKLIHQVAQDV--DIPIIGMGGVANAQDVLEMYMAGASAVAVGTANFA-----DPF----VCP 281 (311)
T ss_dssp STTSCEEEESGGGHHHHHHHHHHHHTTC--SSCEEECSSCCSHHHHHHHHHHTCSEEEECTHHHH-----CTT----HHH
T ss_pred ccCCCCcccCccchHHHHHHHHHHHHhc--CCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHHc-----CcH----HHH
Confidence 123322 46667777665 89999999999999999999999999999999987 333 678
Q ss_pred HHHHHHHHHHHHhCCCChhhhcccc
Q 018519 314 MLREEFELAMALSGCRSLKEITRDH 338 (354)
Q Consensus 314 ~l~~el~~~m~~~G~~~i~~l~~~~ 338 (354)
.++++++.+|...|+++++|+++..
T Consensus 282 ~i~~~l~~~~~~~g~~~~~~~~g~~ 306 (311)
T 1ep3_A 282 KIIDKLPELMDQYRIESLESLIQEV 306 (311)
T ss_dssp HHHHHHHHHHHHTTCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCHHHHhChh
Confidence 8899999999999999999998653
No 28
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.85 E-value=4.1e-20 Score=187.17 Aligned_cols=127 Identities=23% Similarity=0.334 Sum_probs=100.8
Q ss_pred cccccccCCHHHHHHHHHhCCCEEEEecCCcCC------CCCCcChHHHHHHHHHHhcC-CccEEEcCCCCCHHHHHHHH
Q 018519 211 SLSWKGVLTAEDARIAVQAGAAGIIVSNHGARQ------LDYVPATIMALEEVVKATQG-RIPVFLDGGVRRGTDVFKAL 283 (354)
Q Consensus 211 ~~~w~Gi~~~~~a~~~~~~G~d~I~vs~~gg~~------~~~~~~~~~~l~~i~~~~~~-~i~vi~~GGi~~g~dv~kal 283 (354)
++...+|.+.++|+.+.++|+|+|+|+.++|.- ..++.|++..+.+++++++. ++|||++|||+++.|++||+
T Consensus 299 ~vi~g~v~t~e~a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal 378 (511)
T 3usb_A 299 NIIAGNVATAEATKALIEAGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARKHGIPVIADGGIKYSGDMVKAL 378 (511)
T ss_dssp EEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHH
T ss_pred eEEeeeeccHHHHHHHHHhCCCEEEECCCCccccccccccCCCCCcHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHH
Confidence 344447889999999999999999996555431 23568899999998877653 69999999999999999999
Q ss_pred HcCcCEEEEcHHHH--------------------HHHhhc----------------------CHHH-------HHHHHHH
Q 018519 284 ALGASGIFIGRPVV--------------------YSLAAE----------------------GEKG-------VRRVLEM 314 (354)
Q Consensus 284 alGAd~V~igr~~l--------------------~~~~~~----------------------G~~g-------v~~~l~~ 314 (354)
++|||+|++|++|+ |+++.. |.+| +.++++.
T Consensus 379 a~GA~~V~vGs~~~~~~es~g~~~~~~g~~~k~~~gm~s~~a~~~~~~~r~~~~~~~~~~~eG~~~~~~~~~~~~~~~~~ 458 (511)
T 3usb_A 379 AAGAHVVMLGSMFAGVAESPGETEIYQGRQFKVYRGMGSVGAMEKGSKDRYFQEGNKKLVPEGIEGRVPYKGPLADTVHQ 458 (511)
T ss_dssp HTTCSEEEESTTTTTBTTSSSCEEECSSSEEEC----------------------------------CBCCBCHHHHHHH
T ss_pred HhCchhheecHHHhcCccCchhhhhccCeeeeeeeccccHHHHhcccccchhccccccccCCCcEEeCCCCCCHHHHHHH
Confidence 99999999999874 333321 2222 6789999
Q ss_pred HHHHHHHHHHHhCCCChhhhccc
Q 018519 315 LREEFELAMALSGCRSLKEITRD 337 (354)
Q Consensus 315 l~~el~~~m~~~G~~~i~~l~~~ 337 (354)
|..+|+..|.++|+.++++|+..
T Consensus 459 ~~~~lr~~m~~~G~~~i~~l~~~ 481 (511)
T 3usb_A 459 LVGGLRAGMGYCGAQDLEFLREN 481 (511)
T ss_dssp HHHHHHHHHHHTTCSBHHHHHHH
T ss_pred HHHHHHHHHHhcCcccHHHHHhC
Confidence 99999999999999999999754
No 29
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.85 E-value=3.8e-20 Score=187.34 Aligned_cols=126 Identities=21% Similarity=0.271 Sum_probs=104.6
Q ss_pred cccccccCCHHHHHHHHHhCCCEEEEecCCcC-----C-CCCCcChHHHHHHHHHHhcC-------CccEEEcCCCCCHH
Q 018519 211 SLSWKGVLTAEDARIAVQAGAAGIIVSNHGAR-----Q-LDYVPATIMALEEVVKATQG-------RIPVFLDGGVRRGT 277 (354)
Q Consensus 211 ~~~w~Gi~~~~~a~~~~~~G~d~I~vs~~gg~-----~-~~~~~~~~~~l~~i~~~~~~-------~i~vi~~GGi~~g~ 277 (354)
++...++.+.++++.+.++|+|+|+|+.+||. + ..++.|++.+|.++.++++. ++|||++|||+++.
T Consensus 286 ~Vi~G~V~t~~~a~~l~~aGad~I~Vg~~~g~~~~~r~~~~~g~p~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~~~~ 365 (503)
T 1me8_A 286 KVGAGNIVDGEGFRYLADAGADFIKIGIGGGSICITREQKGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDGGIVYDY 365 (503)
T ss_dssp CEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTCCSTTTTCCCCCHHHHHHHHHHHHHHHHHHHSEECCEEEESCCCSHH
T ss_pred eEeeccccCHHHHHHHHHhCCCeEEecccCCcCcccccccCCCCchHHHHHHHHHHHHHHhhhcCCCceEEEeCCCCCHH
Confidence 34445689999999999999999999555542 2 24578999999999877642 59999999999999
Q ss_pred HHHHHHHcCcCEEEEcHHHH--------------------HHHhhcCH---------------------------HHHHH
Q 018519 278 DVFKALALGASGIFIGRPVV--------------------YSLAAEGE---------------------------KGVRR 310 (354)
Q Consensus 278 dv~kalalGAd~V~igr~~l--------------------~~~~~~G~---------------------------~gv~~ 310 (354)
|++|||++|||+|++|++|+ |++++.|+ .++.+
T Consensus 366 di~kAlalGA~~V~iG~~~~~~~E~~~~~~~~~g~~~k~~~g~~s~~~~~~~~~~~~~~~~~~~~eg~~~~~~~~~~v~~ 445 (503)
T 1me8_A 366 HMTLALAMGADFIMLGRYFARFEESPTRKVTINGSVMKEYWGEGSSRARNWQRYDLGGKQKLSFEEGVDSYVPYAGKLKD 445 (503)
T ss_dssp HHHHHHHTTCSEEEESHHHHTBTTSSSCEEEETTEEEEEEECTTSHHHHCC--------------CCCEEEEECCBCHHH
T ss_pred HHHHHHHcCCCEEEECchhhccccCCCceEEECCeEEEeecCccchhHhhccccccccccceecccceeEecCCCCcHHH
Confidence 99999999999999999996 33332221 35789
Q ss_pred HHHHHHHHHHHHHHHhCCCChhhhcc
Q 018519 311 VLEMLREEFELAMALSGCRSLKEITR 336 (354)
Q Consensus 311 ~l~~l~~el~~~m~~~G~~~i~~l~~ 336 (354)
+++.|..||+..|.++|++++++|++
T Consensus 446 ~~~~~~~~l~~~m~~~G~~~i~~l~~ 471 (503)
T 1me8_A 446 NVEASLNKVKSTMCNCGALTIPQLQS 471 (503)
T ss_dssp HHHHHHHHHHHHHHHTTCSBHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCcchHHHHHh
Confidence 99999999999999999999999986
No 30
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.84 E-value=2e-19 Score=181.33 Aligned_cols=123 Identities=24% Similarity=0.376 Sum_probs=99.5
Q ss_pred cccCCHHHHHHHHHhCCCEEEEecCCcCC------CCCCcChHHHHHHHHHHhcC-CccEEEcCCCCCHHHHHHHHHcCc
Q 018519 215 KGVLTAEDARIAVQAGAAGIIVSNHGARQ------LDYVPATIMALEEVVKATQG-RIPVFLDGGVRRGTDVFKALALGA 287 (354)
Q Consensus 215 ~Gi~~~~~a~~~~~~G~d~I~vs~~gg~~------~~~~~~~~~~l~~i~~~~~~-~i~vi~~GGi~~g~dv~kalalGA 287 (354)
.++.+.++|+.+.++|+|+|.|++.+|.. ...+.+++..+.+++++++. ++|||++|||+++.|+.|++++||
T Consensus 276 g~v~t~e~a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal~~GA 355 (490)
T 4avf_A 276 GNIATAEAAKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIADGGIRFSGDLAKAMVAGA 355 (490)
T ss_dssp EEECSHHHHHHHHHTTCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHHHTC
T ss_pred eeeCcHHHHHHHHHcCCCEEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhccCCCcEEEeCCCCCHHHHHHHHHcCC
Confidence 34899999999999999999996544431 24578899999999998743 799999999999999999999999
Q ss_pred CEEEEcHHHH--------------------HHHhhcC------------------------HH----------HHHHHHH
Q 018519 288 SGIFIGRPVV--------------------YSLAAEG------------------------EK----------GVRRVLE 313 (354)
Q Consensus 288 d~V~igr~~l--------------------~~~~~~G------------------------~~----------gv~~~l~ 313 (354)
|+||+|++|+ |+++..| ++ .+++++.
T Consensus 356 d~V~vGs~~~~~~Esp~~~~~~~g~~~k~~~gm~s~~a~~~~~~~~~r~~~~~~~~~~~~~~eg~~~~v~~~g~~~~~~~ 435 (490)
T 4avf_A 356 YCVMMGSMFAGTEEAPGEIELFQGRSYKSYRGMGSLGAMSGSQGSSDRYFQDASAGAEKLVPEGIEGRVPYKGALSAIVH 435 (490)
T ss_dssp SEEEECTTTTTBTTSSSCEEEETTEEEEC---------------------------------------CBCCBCHHHHHH
T ss_pred CeeeecHHHhcCCCCCCceEeECCeEeeeecCcccHHHHhhcccccchhhcccccccccccCCCcEEcCCcCCCHHHHHH
Confidence 9999999874 3332200 12 3568999
Q ss_pred HHHHHHHHHHHHhCCCChhhhccc
Q 018519 314 MLREEFELAMALSGCRSLKEITRD 337 (354)
Q Consensus 314 ~l~~el~~~m~~~G~~~i~~l~~~ 337 (354)
.|..+|+..|.++|+.+|+||+..
T Consensus 436 ~~~~~lr~~~~~~g~~~i~~l~~~ 459 (490)
T 4avf_A 436 QLMGGLRAAMGYTGSADIQQMRTQ 459 (490)
T ss_dssp HHHHHHHHHHHHHTCSSHHHHHHS
T ss_pred HHHHHHHHHHHhcCcCcHHHHHhC
Confidence 999999999999999999999764
No 31
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=99.84 E-value=1.4e-19 Score=174.50 Aligned_cols=243 Identities=14% Similarity=0.129 Sum_probs=165.7
Q ss_pred CCccceeEcCeeeccceEecccccccccCChhhHHHHHHHHHcCCcEEecCCCC--------------------------
Q 018519 58 KIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWST-------------------------- 111 (354)
Q Consensus 58 ~vd~st~l~g~~l~~Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~s~~~~-------------------------- 111 (354)
..|++++++|++++.||++|.=.... +....+.+...|..+++....+
T Consensus 35 m~~L~~~~~Gl~~~NPv~lAaG~~~~------~~e~~~~~~~~G~G~v~~ktvt~~pq~gnp~PR~~~~~~~~iN~~G~~ 108 (345)
T 3oix_A 35 MVSTHTTIGSFDFDNCLMNAAGVYCM------TREELAAIDHSEAGSFVTXTGTLEERAGNPQPRYADTKLGSINSMGLP 108 (345)
T ss_dssp -CCCCEEETTEEESCSEEECTTSSCS------SHHHHHHHHTSSCSBCBCCCBCSSCBCCSCSCCEEECSSEEEECCCCC
T ss_pred cCCcCeEECCEECCCCCEEcCCCCCC------CHHHHHHHHHcCCCeEEeeeecCCCCCCCCCCcEEecccchhccCCCC
Confidence 36899999999999999999522111 4467788888887766532211
Q ss_pred -CCHH----HHHhh----CCCceEEEEeecCChHHHHHHHHHHHHcCCC-EEEEecCCCCCCchhHHhhhccCCCCcCcc
Q 018519 112 -SSVE----EVAST----GPGIRFFQLYVYKDRNVVAQLVRRAERAGFK-AIALTVDTPRLGRREADIKNRFTLPPFLTL 181 (354)
Q Consensus 112 -~~~e----ei~~~----~~~~~~~QLy~~~d~~~~~~~~~~a~~~G~~-ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~ 181 (354)
..+| ++.+. ...|.++||.. .+.+...+.+++++++|++ +|+||+.||.. | +. .
T Consensus 109 n~G~~~~~~~l~~~~~~~~~~pvivsI~g-~~~~d~~~~a~~l~~~g~~d~ielNisCPn~-------------~-G~-~ 172 (345)
T 3oix_A 109 NLGINYYLDYVTELQKQPDSKNHFLSLVG-MSPEETHTILXMVEASKYQGLVELNLSCPNV-------------P-GX-P 172 (345)
T ss_dssp BSCHHHHHHHHHHHHHSTTCCCCEEEECC-SSHHHHHHHHHHHHHSSCCSEEEEECSCCCS-------------T-TC-C
T ss_pred ChhHHHHHHHHHHHhhccCCCCEEEEecC-CCHHHHHHHHHHHhccCCCcEEEEecCCCCc-------------C-Cc-h
Confidence 1122 33321 22678999974 6888889999999999987 99999999973 1 11 1
Q ss_pred ccccCCccCcCcccchhhHHHHHhh-hcCCccccc--ccCCHHHHHHHHHhCCCEEEEec-----------CCcC-CC--
Q 018519 182 KNFQGLDLGKMDEANDSGLAAYVAG-QIDRSLSWK--GVLTAEDARIAVQAGAAGIIVSN-----------HGAR-QL-- 244 (354)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~w~--Gi~~~~~a~~~~~~G~d~I~vs~-----------~gg~-~~-- 244 (354)
....+. ....++.+.+.+ ...|.+.+- +....+.++.+.++|+++|++.| |..+ .+
T Consensus 173 ~l~~~~-------e~l~~il~av~~~~~~PV~vKi~p~~~~~~~a~~~~~aga~~i~~int~nt~g~~~~i~~~~~~~~~ 245 (345)
T 3oix_A 173 QIAYDF-------ETTDQILSEVFTYFTKPLGIKLPPYFDIVHFDQAAAIFNXYPLTFVNCINSIGNGLVIEDETVVIXP 245 (345)
T ss_dssp CGGGCH-------HHHHHHHHHHTTTCCSCEEEEECCCCCHHHHHHHHHHHTTSCCSEEEECCCEEEEECEETTEESCSG
T ss_pred hhcCCH-------HHHHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHhCCCceEEEEeecccccceeeccCcccccc
Confidence 111110 111222222222 223332221 33456677888899988775432 1111 11
Q ss_pred ------CCCcCh----HHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHHHHHhhcCHHHHHHHHHH
Q 018519 245 ------DYVPAT----IMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEM 314 (354)
Q Consensus 245 ------~~~~~~----~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l~~~~~~G~~gv~~~l~~ 314 (354)
.+|++. ++.+.++++.+++++|||++|||+|++|+.+++++|||+|++||+|++. |+ .+++.
T Consensus 246 ~~~~gGlSG~ai~p~a~~~v~~i~~~~~~~ipIIg~GGI~s~~da~~~l~aGAd~V~igra~~~~----gP----~~~~~ 317 (345)
T 3oix_A 246 KNGFGGIGGDYVKPTALANVHAFYKRLNPSIQIIGTGGVXTGRDAFEHILCGASMVQIGTALHQE----GP----QIFKR 317 (345)
T ss_dssp GGGEEEEEEGGGHHHHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHH----CT----HHHHH
T ss_pred ccccCCcCCccccHHHHHHHHHHHHHcCCCCcEEEECCCCChHHHHHHHHhCCCEEEEChHHHhc----Ch----HHHHH
Confidence 123332 6778888888866899999999999999999999999999999998773 44 37888
Q ss_pred HHHHHHHHHHHhCCCChhhhccc
Q 018519 315 LREEFELAMALSGCRSLKEITRD 337 (354)
Q Consensus 315 l~~el~~~m~~~G~~~i~~l~~~ 337 (354)
+.++|+.+|...|+++++|+++.
T Consensus 318 i~~~L~~~l~~~G~~si~e~~G~ 340 (345)
T 3oix_A 318 ITKELXAIMTEKGYETLEDFRGK 340 (345)
T ss_dssp HHHHHHHHHHHHTCCSGGGTTTC
T ss_pred HHHHHHHHHHHcCCCCHHHHHhH
Confidence 99999999999999999999875
No 32
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=99.83 E-value=2.9e-19 Score=175.16 Aligned_cols=111 Identities=23% Similarity=0.312 Sum_probs=94.7
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCC--------C---CcC----hHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHH
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLD--------Y---VPA----TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA 284 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~--------~---~~~----~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kala 284 (354)
.+.|+.+.++|+|+|+++|+...+.+ + |++ +++.+.++++++++++|||++|||+|++|+.++++
T Consensus 286 ~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~eDa~e~l~ 365 (415)
T 3i65_A 286 KEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIE 365 (415)
T ss_dssp HHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECSSCCSHHHHHHHHH
T ss_pred HHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHH
Confidence 56788999999999999998754332 2 332 35788999998877899999999999999999999
Q ss_pred cCcCEEEEcHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHhCCCChhhhcccc
Q 018519 285 LGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDH 338 (354)
Q Consensus 285 lGAd~V~igr~~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~i~~l~~~~ 338 (354)
+|||+|++||++++. |+. +++.+.++|+.+|...|+++++|+++..
T Consensus 366 aGAd~VqIgra~l~~----GP~----~~~~i~~~L~~~l~~~G~~si~e~~G~~ 411 (415)
T 3i65_A 366 AGASVCQLYSCLVFN----GMK----SAVQIKRELNHLLYQRGYYNLKEAIGRK 411 (415)
T ss_dssp HTEEEEEESHHHHHH----GGG----HHHHHHHHHHHHHHHTTCSSSTTTTTTT
T ss_pred cCCCEEEEcHHHHhc----CHH----HHHHHHHHHHHHHHHcCCCCHHHHhChh
Confidence 999999999999983 443 6788999999999999999999998754
No 33
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=99.83 E-value=9.8e-19 Score=169.97 Aligned_cols=252 Identities=19% Similarity=0.230 Sum_probs=158.0
Q ss_pred eeccccCCCCCCccceeEcCeeeccceEecccccccccCChhhHHHHHHHHHcCCcEEe-cCCC------C---------
Q 018519 48 FRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL-SSWS------T--------- 111 (354)
Q Consensus 48 l~pr~l~~~~~vd~st~l~g~~l~~Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~-s~~~------~--------- 111 (354)
+.|+. ...++.+++++++|.++++||++|.= . ...++ ......+.|..++. .+.. +
T Consensus 38 ~~~~~-~~~~~~~L~~~~~Gl~~~NPvglAaG-~----~~~~~--~~~~~~~~g~G~v~~ktvt~~pq~GNp~PR~~~~~ 109 (367)
T 3zwt_A 38 LLPRA-RFQDSDMLEVRVLGHKFRNPVGIAAG-F----DKHGE--AVDGLYKMGFGFVEIGSVTPKPQEGNPRPRVFRLP 109 (367)
T ss_dssp CC----CCCCCGGGCEEETTEEESSSEEECTT-S----STTSS--SHHHHHHTTCSEEEEEEECSSCBCCSCSCCEEEEG
T ss_pred ccccc-ccCCCCCCcEEECCEEcCCCCEeCCC-c----CCCHH--HHHHHHhcCcCeEEeCCccCCCCCCCCCCeEEEec
Confidence 44442 23567899999999999999999942 1 12222 22333345665554 2211 1
Q ss_pred -------------CCHH----HHHhh---------CCCceEEEEeecCC-hHHHHHHHHHHHHc--CCCEEEEecCCCCC
Q 018519 112 -------------SSVE----EVAST---------GPGIRFFQLYVYKD-RNVVAQLVRRAERA--GFKAIALTVDTPRL 162 (354)
Q Consensus 112 -------------~~~e----ei~~~---------~~~~~~~QLy~~~d-~~~~~~~~~~a~~~--G~~ai~i~vd~p~~ 162 (354)
..++ ++.+. ...+.++||..+++ .+...++++.++.. .+++|+||++||..
T Consensus 110 ~~~~~iN~~G~~N~G~~~~~~~l~~~~~~~~~~~~~~~pv~vniggn~~t~~~~~dy~~~~~~~~~~ad~ielNisCPn~ 189 (367)
T 3zwt_A 110 EDQAVINRYGFNSHGLSVVEHRLRARQQKQAKLTEDGLPLGVNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSPNT 189 (367)
T ss_dssp GGTEEEECCCCCBCCHHHHHHHHHTTHHHHHHHHHTTCCEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCTTS
T ss_pred CccceeeccCCCCccHHHHHHHHHHHhhhccccccCCceEEEEEecCCCCCcCHHHHHHHHHHHhhhCCEEEEECCCCCC
Confidence 1122 23221 12478999965421 12334444444443 48999999999973
Q ss_pred CchhHHhhhccCCCCcCccccccCCccCcCcccchhhH-HHHHhh---h---cCCccccc---ccC---CHHHHHHHHHh
Q 018519 163 GRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGL-AAYVAG---Q---IDRSLSWK---GVL---TAEDARIAVQA 229 (354)
Q Consensus 163 g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~---~~~~~~w~---Gi~---~~~~a~~~~~~ 229 (354)
+ +. +.+.+ ......+ ..+.+. . ...++..| ++. ..+.|+.+.++
T Consensus 190 -------------~-G~--~~l~~-------~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~~~~~~ia~~~~~a 246 (367)
T 3zwt_A 190 -------------A-GL--RSLQG-------KAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKEL 246 (367)
T ss_dssp -------------T-TG--GGGGS-------HHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHHHHHHHHHHH
T ss_pred -------------C-Cc--cccCC-------HHHHHHHHHHHHHHHhhccccCCceEEEEeCCCCCHHHHHHHHHHHHHc
Confidence 1 11 11111 0111121 111111 0 12222222 221 24568889999
Q ss_pred CCCEEEEecCC-cCC---------CCC---CcC----hHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEE
Q 018519 230 GAAGIIVSNHG-ARQ---------LDY---VPA----TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFI 292 (354)
Q Consensus 230 G~d~I~vs~~g-g~~---------~~~---~~~----~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~i 292 (354)
|+|+|+++|+. ++. ..+ |++ +++.+.++++.+++++|||++|||+|++|+.+++++|||+|++
T Consensus 247 Gadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s~~da~~~l~~GAd~V~v 326 (367)
T 3zwt_A 247 GIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQL 326 (367)
T ss_dssp TCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHHTCSEEEE
T ss_pred CCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 99999999874 221 112 222 3578899999887789999999999999999999999999999
Q ss_pred cHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHhCCCChhhhcccc
Q 018519 293 GRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDH 338 (354)
Q Consensus 293 gr~~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~i~~l~~~~ 338 (354)
||++++. |+. +++.+.++|+.+|...|+++++|+.+..
T Consensus 327 gra~l~~----gP~----~~~~i~~~l~~~m~~~G~~~i~e~~G~~ 364 (367)
T 3zwt_A 327 YTALTFW----GPP----VVGKVKRELEALLKEQGFGGVTDAIGAD 364 (367)
T ss_dssp SHHHHHH----CTH----HHHHHHHHHHHHHHHTTCSSHHHHTTGG
T ss_pred CHHHHhc----CcH----HHHHHHHHHHHHHHHcCCCCHHHhhCcc
Confidence 9999873 443 7888999999999999999999998753
No 34
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.83 E-value=3.1e-19 Score=180.14 Aligned_cols=122 Identities=25% Similarity=0.385 Sum_probs=100.4
Q ss_pred cccCCHHHHHHHHHhCCCEEEEecCCcCC------CCCCcChHHHHHHHHHHhcC-CccEEEcCCCCCHHHHHHHHHcCc
Q 018519 215 KGVLTAEDARIAVQAGAAGIIVSNHGARQ------LDYVPATIMALEEVVKATQG-RIPVFLDGGVRRGTDVFKALALGA 287 (354)
Q Consensus 215 ~Gi~~~~~a~~~~~~G~d~I~vs~~gg~~------~~~~~~~~~~l~~i~~~~~~-~i~vi~~GGi~~g~dv~kalalGA 287 (354)
.++.+.+.|+.+.++|+|+|+|++.+|.. ...+.|.+..+.+++++++. ++|||++|||+++.|+.|++++||
T Consensus 278 g~v~t~e~a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~kala~GA 357 (496)
T 4fxs_A 278 GNVATAEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGA 357 (496)
T ss_dssp EEECSHHHHHHHHHHTCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTC
T ss_pred cccCcHHHHHHHHHhCCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHHHHHcCC
Confidence 35889999999999999999997654321 13467899999999987743 699999999999999999999999
Q ss_pred CEEEEcHHHHHH--------------------Hhh-------------c-----------CH-------HHHHHHHHHHH
Q 018519 288 SGIFIGRPVVYS--------------------LAA-------------E-----------GE-------KGVRRVLEMLR 316 (354)
Q Consensus 288 d~V~igr~~l~~--------------------~~~-------------~-----------G~-------~gv~~~l~~l~ 316 (354)
|+||+|++|+.. ++. . |. ..+++++..|.
T Consensus 358 d~V~iGs~f~~t~Espg~~~~~~g~~~k~~~gm~s~~a~~~~~~~r~~~~~~~~~~~~~eg~~~~v~~~g~~~~~~~~~~ 437 (496)
T 4fxs_A 358 SCVMVGSMFAGTEEAPGEVILYQGRSYKAYRGMGSLGAMSKGSSDRYFQTDNAADKLVPEGIEGRIAYKGHLKEIIHQQM 437 (496)
T ss_dssp SEEEESTTTTTBTTSSSCCEESSSCEEEEEECTTSHHHHHSSSCCSTTTC---CCCCCCSBCEEEEECCBCHHHHHHHHH
T ss_pred CeEEecHHHhcCCCCCcceeeeCCeEeeeecccchHHHHhccccccccccccccccccCCccEEeCCCCCCHHHHHHHHH
Confidence 999999988532 111 0 00 24679999999
Q ss_pred HHHHHHHHHhCCCChhhhcc
Q 018519 317 EEFELAMALSGCRSLKEITR 336 (354)
Q Consensus 317 ~el~~~m~~~G~~~i~~l~~ 336 (354)
.+|+..|.++|+.+|+||+.
T Consensus 438 ~~l~~~~~~~g~~~i~~l~~ 457 (496)
T 4fxs_A 438 GGLRSCMGLTGSATVEDLRT 457 (496)
T ss_dssp HHHHHHHHHHTCSBHHHHHH
T ss_pred HHHHHHHHhcCcCcHHHHHh
Confidence 99999999999999999975
No 35
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=99.82 E-value=1.3e-18 Score=168.42 Aligned_cols=244 Identities=17% Similarity=0.166 Sum_probs=164.1
Q ss_pred eccceEecccccccccCChhhHHHHHHHHHcCC-cEEecCCCCCC------HHHHHhhCC--CceEEEEeecCChHHHHH
Q 018519 70 ISMPIMIAPTAMQKMAHPEGEYATARAASAAGT-IMTLSSWSTSS------VEEVASTGP--GIRFFQLYVYKDRNVVAQ 140 (354)
Q Consensus 70 l~~Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~-~~~~s~~~~~~------~eei~~~~~--~~~~~QLy~~~d~~~~~~ 140 (354)
++.||++|||++.+ +..++..++++|. .++++++.+.. .+++.+..+ .+.++||+. .+++.+.+
T Consensus 2 l~nriv~APM~g~t------d~~~r~~~r~~Gg~gli~te~~~~~~~~~~~~~~~~~~~~~~~p~~vQL~g-~~p~~~~~ 74 (350)
T 3b0p_A 2 LDPRLSVAPMVDRT------DRHFRFLVRQVSLGVRLYTEMTVDQAVLRGNRERLLAFRPEEHPIALQLAG-SDPKSLAE 74 (350)
T ss_dssp CCCSEEECCCTTTS------SHHHHHHHHHHCSSSBEECCCEEHHHHHHSCHHHHHCCCGGGCSEEEEEEC-SCHHHHHH
T ss_pred CCCCEEECCCCCCC------HHHHHHHHHHcCCCCEEEeCCEEechhhcCCHHHHhccCCCCCeEEEEeCC-CCHHHHHH
Confidence 57899999998755 7788999999996 77888874321 113333333 689999984 78999999
Q ss_pred HHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhh-HHHHHhhhcCCc-----ccc
Q 018519 141 LVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSG-LAAYVAGQIDRS-----LSW 214 (354)
Q Consensus 141 ~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~w 214 (354)
.+++++++|++.|+||++||..-.| ..++ +.....+. ..... +.++.+....|. ++|
T Consensus 75 aA~~a~~~G~D~IeIn~gcP~~~~~----~d~~------G~~l~~~~-------~~~~eiv~av~~~v~~PV~vKiR~g~ 137 (350)
T 3b0p_A 75 AARIGEAFGYDEINLNLGCPSEKAQ----EGGY------GACLLLDL-------ARVREILKAMGEAVRVPVTVKMRLGL 137 (350)
T ss_dssp HHHHHHHTTCSEEEEEECCCSHHHH----HTTC------GGGGGGCH-------HHHHHHHHHHHHHCSSCEEEEEESCB
T ss_pred HHHHHHHcCCCEEEECCcCCCCcCc----CCCc------chhHHhCH-------HHHHHHHHHHHHHhCCceEEEEecCc
Confidence 9999999999999999999974211 1111 11111110 01112 222333233332 345
Q ss_pred cccC----CHHHHHHHHHhCCCEEEEecCCcCCCC-------CCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHH
Q 018519 215 KGVL----TAEDARIAVQAGAAGIIVSNHGARQLD-------YVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKAL 283 (354)
Q Consensus 215 ~Gi~----~~~~a~~~~~~G~d~I~vs~~gg~~~~-------~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kal 283 (354)
+... ..+.++.+.++|+|+|+|++.-..+.. ..+..++.+.++++.++ ++|||++|||+|++|+.+++
T Consensus 138 ~~~~~~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~-~iPVianGgI~s~eda~~~l 216 (350)
T 3b0p_A 138 EGKETYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFP-QLTFVTNGGIRSLEEALFHL 216 (350)
T ss_dssp TTCCCHHHHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCT-TSEEEEESSCCSHHHHHHHH
T ss_pred CccccHHHHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCC-CCeEEEECCcCCHHHHHHHH
Confidence 4322 356788999999999999542110111 11346888999988763 79999999999999999999
Q ss_pred HcCcCEEEEcHHHHHH-----Hh---hcC---HHHHHHHHHHHHHHHHHHHHHhCCCChhhhcccceee
Q 018519 284 ALGASGIFIGRPVVYS-----LA---AEG---EKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVT 341 (354)
Q Consensus 284 alGAd~V~igr~~l~~-----~~---~~G---~~gv~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l~~ 341 (354)
+ |||+||+||+++.. .. ..| .....+.++.+.++++..+. .|. .+.+++++.++.
T Consensus 217 ~-GaD~V~iGRa~l~~P~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~g~-~~~~~~kh~~~~ 282 (350)
T 3b0p_A 217 K-RVDGVMLGRAVYEDPFVLEEADRRVFGLPRRPSRLEVARRMRAYLEEEVL-KGT-PPWAVLRHMLNL 282 (350)
T ss_dssp T-TSSEEEECHHHHHCGGGGTTHHHHTTCCSCCCCHHHHHHHHHHHHHHHHH-HTC-CHHHHHTTSTTT
T ss_pred h-CCCEEEECHHHHhCcHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHH-cCc-cHHHHHHHHHHH
Confidence 8 99999999987631 11 112 12345677888888887777 476 688888887654
No 36
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=99.82 E-value=1.5e-18 Score=172.15 Aligned_cols=109 Identities=22% Similarity=0.306 Sum_probs=92.3
Q ss_pred HHHHHHHhCCCEEEEecCCcCCCC--------CC---cC----hHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcC
Q 018519 222 DARIAVQAGAAGIIVSNHGARQLD--------YV---PA----TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG 286 (354)
Q Consensus 222 ~a~~~~~~G~d~I~vs~~gg~~~~--------~~---~~----~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalG 286 (354)
.|+.+.++|+|+|+++|+...+.+ +| ++ +++.+.++++++++++|||++|||+|++|+.++|++|
T Consensus 316 iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~~DA~e~l~aG 395 (443)
T 1tv5_A 316 IADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAG 395 (443)
T ss_dssp HHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHTT
T ss_pred HHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEECCCCCHHHHHHHHHcC
Confidence 488999999999999998654322 12 21 3577888998887789999999999999999999999
Q ss_pred cCEEEEcHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHhCCCChhhhcccc
Q 018519 287 ASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDH 338 (354)
Q Consensus 287 Ad~V~igr~~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~i~~l~~~~ 338 (354)
||+|++||++++. |+ .+++.++++++.+|...|+++++|+.+..
T Consensus 396 Ad~Vqigrall~~----gP----~l~~~i~~~l~~~l~~~G~~si~e~~G~~ 439 (443)
T 1tv5_A 396 ASVCQLYSCLVFN----GM----KSAVQIKRELNHLLYQRGYYNLKEAIGRK 439 (443)
T ss_dssp EEEEEESHHHHHH----GG----GHHHHHHHHHHHHHHHHTCSSSGGGTTTT
T ss_pred CCEEEEcHHHHhc----Ch----HHHHHHHHHHHHHHHHhCCCCHHHHhhhh
Confidence 9999999999972 33 37888999999999999999999998765
No 37
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=99.81 E-value=2.7e-18 Score=165.21 Aligned_cols=209 Identities=19% Similarity=0.149 Sum_probs=136.2
Q ss_pred CCccceeEcCeeeccceEecccccccccCChhhHHHHHHHHHcCCcEEecCCCC--------------------------
Q 018519 58 KIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWST-------------------------- 111 (354)
Q Consensus 58 ~vd~st~l~g~~l~~Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~s~~~~-------------------------- 111 (354)
.+|++++++|+++++||++|++ . +++++ +++++++.|+++++.+..+
T Consensus 42 ~~~l~~~i~g~~l~npi~~aag-~----~~~~~--~~~~~a~~G~g~i~~~~~~~~~~~g~~~pr~~~~~~d~~~in~~g 114 (336)
T 1f76_A 42 VPAKPVNCMGLTFKNPLGLAAG-L----DKDGE--CIDALGAMGFGSIEIGTVTPRPQPGNDKPRLFRLVDAEGLINRMG 114 (336)
T ss_dssp CCCCCEEETTEEESSSEEECTT-S----STTCC--CHHHHHHTTCSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCC
T ss_pred CCCCCeEECCEEcCCCcEeCcc-c----CCcHH--HHHHHHHcCccEEEeCCCCCCCCCCCCCcceeeccccceeeecCC
Confidence 4899999999999999999953 2 33333 8888999999886532211
Q ss_pred ---CCHHH----HHhhC-CCceEEEEeecCC------hHHHHHHHHHHHHcCCCEEEEecCCCCCC-chhHHhhhccCCC
Q 018519 112 ---SSVEE----VASTG-PGIRFFQLYVYKD------RNVVAQLVRRAERAGFKAIALTVDTPRLG-RREADIKNRFTLP 176 (354)
Q Consensus 112 ---~~~ee----i~~~~-~~~~~~QLy~~~d------~~~~~~~~~~a~~~G~~ai~i~vd~p~~g-~r~~~~r~~~~~p 176 (354)
...++ +.+.. ..+..+|+....+ .+...+.++++.+ |++++++|+.||... .|
T Consensus 115 ~~~~g~~~~~~~~~~~~~~~~~~v~i~~~~~~~i~~~~~~~~~aa~~~~~-g~d~iein~~sP~~~g~~----------- 182 (336)
T 1f76_A 115 FNNLGVDNLVENVKKAHYDGVLGINIGKNKDTPVEQGKDDYLICMEKIYA-YAGYIAINISSPNTPGLR----------- 182 (336)
T ss_dssp CCBCCHHHHHHHHHHCCCCSEEEEEECCCTTSCGGGTHHHHHHHHHHHGG-GCSEEEEECCCSSSTTGG-----------
T ss_pred CCCcCHHHHHHHHHhcccCCcEEEEecCCCCCcccccHHHHHHHHHHHhc-cCCEEEEEccCCCCCCcc-----------
Confidence 01222 22222 2478889865331 4555566666655 899999999999731 11
Q ss_pred CcCccccccCCccCcCcccchhh-HHHHHhhh---------cCCccccc-ccCC----HHHHHHHHHhCCCEEEEecCC-
Q 018519 177 PFLTLKNFQGLDLGKMDEANDSG-LAAYVAGQ---------IDRSLSWK-GVLT----AEDARIAVQAGAAGIIVSNHG- 240 (354)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---------~~~~~~w~-Gi~~----~~~a~~~~~~G~d~I~vs~~g- 240 (354)
.+.+. ....+ +..+.+.. ..|.+..- .-.+ .+.|+.+.++|+|+|+|+|++
T Consensus 183 ------~~~~~-------~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~ 249 (336)
T 1f76_A 183 ------TLQYG-------EALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTL 249 (336)
T ss_dssp ------GGGSH-------HHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCCBC
T ss_pred ------cccCH-------HHHHHHHHHHHHHHHhhhhcccccCceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCcc
Confidence 00000 01111 12222222 22332221 1133 344789999999999999874
Q ss_pred cCC---------CCC---Cc----ChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHHH
Q 018519 241 ARQ---------LDY---VP----ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 298 (354)
Q Consensus 241 g~~---------~~~---~~----~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l~ 298 (354)
+++ ..+ |+ .+++.+.++++.+++++|||++|||++++|+.++|++|||+|++||++++
T Consensus 250 ~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~~~da~~~l~~GAd~V~igr~~l~ 323 (336)
T 1f76_A 250 DRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGASLVQIYSGFIF 323 (336)
T ss_dssp CCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHH
T ss_pred cccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHCCCCEEEeeHHHHh
Confidence 222 011 22 23567888888887789999999999999999999999999999999997
No 38
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.80 E-value=4.5e-18 Score=171.74 Aligned_cols=126 Identities=25% Similarity=0.415 Sum_probs=103.2
Q ss_pred ccccccCCHHHHHHHHHhCCCEEEEecCCcCC-----C-CCCcChHHHHHHHHHHhcC-CccEEEcCCCCCHHHHHHHHH
Q 018519 212 LSWKGVLTAEDARIAVQAGAAGIIVSNHGARQ-----L-DYVPATIMALEEVVKATQG-RIPVFLDGGVRRGTDVFKALA 284 (354)
Q Consensus 212 ~~w~Gi~~~~~a~~~~~~G~d~I~vs~~gg~~-----~-~~~~~~~~~l~~i~~~~~~-~i~vi~~GGi~~g~dv~kala 284 (354)
+...++.+.++++.+.++|+|+|+|+++||.. . .++.|++..++++.+.++. ++|||++|||+++.|+.|+|+
T Consensus 281 vi~g~~~t~e~a~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipvia~GGI~~~~di~kala 360 (494)
T 1vrd_A 281 VVAGNVATPEGTEALIKAGADAVKVGVGPGSICTTRVVAGVGVPQLTAVMECSEVARKYDVPIIADGGIRYSGDIVKALA 360 (494)
T ss_dssp EEEEEECSHHHHHHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHH
T ss_pred EEeCCcCCHHHHHHHHHcCCCEEEEcCCCCccccccccCCCCccHHHHHHHHHHHHhhcCCCEEEECCcCCHHHHHHHHH
Confidence 33356789999999999999999999887631 1 2467888999999887654 799999999999999999999
Q ss_pred cCcCEEEEcHHHHH--------------------HHhh-----cC--------------HHH----------HHHHHHHH
Q 018519 285 LGASGIFIGRPVVY--------------------SLAA-----EG--------------EKG----------VRRVLEML 315 (354)
Q Consensus 285 lGAd~V~igr~~l~--------------------~~~~-----~G--------------~~g----------v~~~l~~l 315 (354)
+|||+|++||+|+. ++++ .| ++| +.++++.+
T Consensus 361 ~GAd~V~iGr~~l~~~e~~~~~~~~~~~~~k~~~g~~~~~a~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~l 440 (494)
T 1vrd_A 361 AGAESVMVGSIFAGTEEAPGETILYQGRKYKAYRGMGSLGAMRSGSADRYGQEGENKFVPEGIEGMVPYKGTVKDVVHQL 440 (494)
T ss_dssp TTCSEEEESHHHHTBTTSSSEEEEETTEEEEECBCCC-------------------------CBCCEECCBCHHHHHHHH
T ss_pred cCCCEEEECHHHhcCCcCCcceEEECCEEEEEEeccchHHHHhhccccchhhcccccccCCcceEccCcCCCHHHHHHHH
Confidence 99999999999972 2221 00 233 67999999
Q ss_pred HHHHHHHHHHhCCCChhhhccc
Q 018519 316 REEFELAMALSGCRSLKEITRD 337 (354)
Q Consensus 316 ~~el~~~m~~~G~~~i~~l~~~ 337 (354)
..+|+..|.++|+.++.+|++.
T Consensus 441 ~~~l~~~~~~~G~~~~~~l~~~ 462 (494)
T 1vrd_A 441 VGGLRSGMGYIGARTIKELQEK 462 (494)
T ss_dssp HHHHHHHHHHHTCSSHHHHHHH
T ss_pred HHHHHHHhhhcCCCCHHHHHhh
Confidence 9999999999999999999865
No 39
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.78 E-value=1e-17 Score=168.90 Aligned_cols=124 Identities=19% Similarity=0.295 Sum_probs=102.2
Q ss_pred cccCCHHHHHHHHHhCCCEEEEecCCcCC------CCCCcChHHHHHHHHHHhc-CCccEEEcCCCCCHHHHHHHHHcCc
Q 018519 215 KGVLTAEDARIAVQAGAAGIIVSNHGARQ------LDYVPATIMALEEVVKATQ-GRIPVFLDGGVRRGTDVFKALALGA 287 (354)
Q Consensus 215 ~Gi~~~~~a~~~~~~G~d~I~vs~~gg~~------~~~~~~~~~~l~~i~~~~~-~~i~vi~~GGi~~g~dv~kalalGA 287 (354)
.++.+.+++..+.++|+|+|.|++.+|.. ..++.++++.+.++.++++ .++|||++|||+++.|++|++++||
T Consensus 280 G~v~t~~~a~~~~~~Gad~I~vg~g~g~~~~tr~~~~~~~p~~~~l~~~~~~~~~~~ipvia~GGi~~~~di~kal~~GA 359 (491)
T 1zfj_A 280 GNIATAEGARALYDAGVDVVKVGIGPGSICTTRVVAGVGVPQVTAIYDAAAVAREYGKTIIADGGIKYSGDIVKALAAGG 359 (491)
T ss_dssp EEECSHHHHHHHHHTTCSEEEECSSCCTTBCHHHHTCCCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTC
T ss_pred CCccCHHHHHHHHHcCCCEEEECccCCcceEEeeecCCCCCcHHHHHHHHHHHhhcCCCEEeeCCCCCHHHHHHHHHcCC
Confidence 46889999999999999999997765532 1346788889988887653 3799999999999999999999999
Q ss_pred CEEEEcHHHHH--------------------HHhhc-------------C---------HHH----------HHHHHHHH
Q 018519 288 SGIFIGRPVVY--------------------SLAAE-------------G---------EKG----------VRRVLEML 315 (354)
Q Consensus 288 d~V~igr~~l~--------------------~~~~~-------------G---------~~g----------v~~~l~~l 315 (354)
|+|++||+|+. +++.. | ++| +.++++.+
T Consensus 360 ~~v~vG~~~~~~~e~~~~~~~~~g~~~k~~~g~~~~~a~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l 439 (491)
T 1zfj_A 360 NAVMLGSMFAGTDEAPGETEIYQGRKYKTYRGMGSIAAMKKGSSDRYFQGSVNEANKLVPEGIEGRVAYKGAASDIVFQM 439 (491)
T ss_dssp SEEEESTTTTTBSSCCCCEEEETTEEEEEEECTTSHHHHCC--------------CCCCCSBCEEEEECCBCHHHHHHHH
T ss_pred cceeeCHHhhCCCcCcceEEEECCEEEEEEecccCHHHHhccccccccccccccccccCcCcceEecCcCCCHHHHHHHH
Confidence 99999999972 11110 0 233 88999999
Q ss_pred HHHHHHHHHHhCCCChhhhcccc
Q 018519 316 REEFELAMALSGCRSLKEITRDH 338 (354)
Q Consensus 316 ~~el~~~m~~~G~~~i~~l~~~~ 338 (354)
..||+..|.++|+.++.+|+...
T Consensus 440 ~~~l~~~~~~~G~~~~~~l~~~~ 462 (491)
T 1zfj_A 440 LGGIRSGMGYVGAGDIQELHENA 462 (491)
T ss_dssp HHHHHHHHHHTTCSSHHHHHHHC
T ss_pred HHHHHHHhhhcCcccHHHHHhcC
Confidence 99999999999999999998653
No 40
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.77 E-value=3.3e-17 Score=166.26 Aligned_cols=121 Identities=25% Similarity=0.348 Sum_probs=93.2
Q ss_pred cccCCHHHHHHHHHhCCCEEEEecCCcCC------CCCCcChH---HHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHc
Q 018519 215 KGVLTAEDARIAVQAGAAGIIVSNHGARQ------LDYVPATI---MALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL 285 (354)
Q Consensus 215 ~Gi~~~~~a~~~~~~G~d~I~vs~~gg~~------~~~~~~~~---~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalal 285 (354)
+++.+.++|+.+.++|+|+|+|++|+|.. .+++.+.. ..+.++++.+ ++|||++|||+++.|+.|++++
T Consensus 302 ~~v~t~~~a~~l~~aGad~I~vg~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~--~ipVia~GGI~~~~di~kala~ 379 (514)
T 1jcn_A 302 GNVVTAAQAKNLIDAGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRF--GVPIIADGGIQTVGHVVKALAL 379 (514)
T ss_dssp EEECSHHHHHHHHHHTCSEEEECSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGG--TCCEEEESCCCSHHHHHHHHHT
T ss_pred cccchHHHHHHHHHcCCCEEEECCCCCcccccccccCCCccchhHHHHHHHHHhhC--CCCEEEECCCCCHHHHHHHHHc
Confidence 46899999999999999999997764421 22454443 4445555444 7999999999999999999999
Q ss_pred CcCEEEEcHHHHH--------------------HHhh---------------------cCHHHH----------HHHHHH
Q 018519 286 GASGIFIGRPVVY--------------------SLAA---------------------EGEKGV----------RRVLEM 314 (354)
Q Consensus 286 GAd~V~igr~~l~--------------------~~~~---------------------~G~~gv----------~~~l~~ 314 (354)
|||+|++||+|+. ++.. .+++|+ .++++.
T Consensus 380 GAd~V~iG~~~l~~~e~~~~~~~~~g~~~k~~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~g~~~~~i~~ 459 (514)
T 1jcn_A 380 GASTVMMGSLLAATTEAPGEYFFSDGVRLKKYRGMGSLDAMEKSSSSQKRYFSEGDKVKIAQGVSGSIQDKGSIQKFVPY 459 (514)
T ss_dssp TCSEEEESTTTTTSTTSSCC--------------------------------------------------CCCHHHHHHH
T ss_pred CCCeeeECHHHHcCCcCCcceEeECCEEEEEecCcCCHHHHhhccccchhhccccccceecccceecCCCcccHHHHHHH
Confidence 9999999998753 1210 023554 899999
Q ss_pred HHHHHHHHHHHhCCCChhhhccc
Q 018519 315 LREEFELAMALSGCRSLKEITRD 337 (354)
Q Consensus 315 l~~el~~~m~~~G~~~i~~l~~~ 337 (354)
|..||+..|.++|+++++||++.
T Consensus 460 l~~~l~~~m~~~G~~~i~~l~~~ 482 (514)
T 1jcn_A 460 LIAGIQHGCQDIGARSLSVLRSM 482 (514)
T ss_dssp HHHHHHHHHHHHTCSBHHHHHHH
T ss_pred HHHHHHHHHHhhCcccHHHHHhh
Confidence 99999999999999999999874
No 41
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=99.77 E-value=2.3e-17 Score=158.12 Aligned_cols=188 Identities=20% Similarity=0.235 Sum_probs=137.4
Q ss_pred eeeccceEecccccccccCChhhHHHHHHHHHcCCcEEecCCCCCCHHHHH-------hhCCCceEEEEeecCChHHHHH
Q 018519 68 FKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA-------STGPGIRFFQLYVYKDRNVVAQ 140 (354)
Q Consensus 68 ~~l~~Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~s~~~~~~~eei~-------~~~~~~~~~QLy~~~d~~~~~~ 140 (354)
+.++.||+++||++.+ +..++.++.++|...+++.. ..+.+++. +....++.++++.. ++. ..+
T Consensus 23 l~~~~Pii~apM~gvs------~~~la~av~~aGglG~i~~~-~~~~~~l~~~i~~i~~~~~~p~gVnl~~~-~~~-~~~ 93 (326)
T 3bo9_A 23 LEIEHPILMGGMAWAG------TPTLAAAVSEAGGLGIIGSG-AMKPDDLRKAISELRQKTDKPFGVNIILV-SPW-ADD 93 (326)
T ss_dssp HTCSSSEEECCCTTTS------CHHHHHHHHHTTSBEEEECT-TCCHHHHHHHHHHHHTTCSSCEEEEEETT-STT-HHH
T ss_pred cCCCCCEEECCCCCCC------CHHHHHHHHhCCCcEEeCCC-CCCHHHHHHHHHHHHHhcCCCEEEEEecc-CCC-HHH
Confidence 3467999999999755 56899999999987777532 23554432 22225678888752 332 356
Q ss_pred HHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCcccccccCCH
Q 018519 141 LVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKGVLTA 220 (354)
Q Consensus 141 ~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~Gi~~~ 220 (354)
.++.+.+.|++.+.++.++|.. +.+.+.... ...+..+.+.
T Consensus 94 ~~~~~~~~g~d~V~l~~g~p~~-------------------------------------~~~~l~~~g--~~v~~~v~s~ 134 (326)
T 3bo9_A 94 LVKVCIEEKVPVVTFGAGNPTK-------------------------------------YIRELKENG--TKVIPVVASD 134 (326)
T ss_dssp HHHHHHHTTCSEEEEESSCCHH-------------------------------------HHHHHHHTT--CEEEEEESSH
T ss_pred HHHHHHHCCCCEEEECCCCcHH-------------------------------------HHHHHHHcC--CcEEEEcCCH
Confidence 7888889999999998877620 011111111 1233367899
Q ss_pred HHHHHHHHhCCCEEEEec--CCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHHH
Q 018519 221 EDARIAVQAGAAGIIVSN--HGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 298 (354)
Q Consensus 221 ~~a~~~~~~G~d~I~vs~--~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l~ 298 (354)
++++.+.++|+|+|+++| +||++ +..++++.++++++.+ ++|||++|||++++|+.+++++||++|++||+|+.
T Consensus 135 ~~a~~a~~~GaD~i~v~g~~~GG~~--G~~~~~~ll~~i~~~~--~iPviaaGGI~~~~dv~~al~~GA~gV~vGs~~~~ 210 (326)
T 3bo9_A 135 SLARMVERAGADAVIAEGMESGGHI--GEVTTFVLVNKVSRSV--NIPVIAAGGIADGRGMAAAFALGAEAVQMGTRFVA 210 (326)
T ss_dssp HHHHHHHHTTCSCEEEECTTSSEEC--CSSCHHHHHHHHHHHC--SSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHT
T ss_pred HHHHHHHHcCCCEEEEECCCCCccC--CCccHHHHHHHHHHHc--CCCEEEECCCCCHHHHHHHHHhCCCEEEechHHHc
Confidence 999999999999999988 46653 2467899999999887 89999999999999999999999999999999987
Q ss_pred HHhhcCHHH
Q 018519 299 SLAAEGEKG 307 (354)
Q Consensus 299 ~~~~~G~~g 307 (354)
...+.+.++
T Consensus 211 ~~e~~~~~~ 219 (326)
T 3bo9_A 211 SVESDVHPV 219 (326)
T ss_dssp BSSCCSCHH
T ss_pred CccccccHH
Confidence 554433333
No 42
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=99.76 E-value=2.3e-17 Score=159.93 Aligned_cols=247 Identities=16% Similarity=0.074 Sum_probs=145.8
Q ss_pred CCCCCccceeEcCeeeccceEecccccccccCChhhHHHHHHHHHcCCcEEe-cCCC-----------------------
Q 018519 55 DVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL-SSWS----------------------- 110 (354)
Q Consensus 55 ~~~~vd~st~l~g~~l~~Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~-s~~~----------------------- 110 (354)
...+.+++|+++|++|++||++|+-.+. . +....+.....|..++. ++..
T Consensus 31 g~~~~~L~v~~~Gl~f~NPvglAaG~~~----~--~~e~~~~l~~~G~G~v~~~tvt~~pq~GNp~PR~~~l~~~~iN~~ 104 (354)
T 3tjx_A 31 GRGSMSLQVNLLNNTFANPFMNAAGVMC----T--TTEELVAMTESASGSLVSKSCTPALREGNPTPRYQALPLGSINSM 104 (354)
T ss_dssp --CCCCCCEEETTEEESSSEEECTTSSC----S--SHHHHHHHHHSSCSCEEEEEECSSCBCCSCSCCEEEETTEEEECC
T ss_pred CCCCCceeEEECCEEcCCCcEEccCCCC----C--CHHHHHHHHHcCCCEEEeCCcCcccccCCCCCeEEEccccccccc
Confidence 3467899999999999999999952222 2 45677777777876554 2211
Q ss_pred ---CCCHH----HHHhhC---CCceEEEEeecCChHHHHHHHHHHHH---cCCCEEEEecCCCCCCchhHHhhhccCCCC
Q 018519 111 ---TSSVE----EVASTG---PGIRFFQLYVYKDRNVVAQLVRRAER---AGFKAIALTVDTPRLGRREADIKNRFTLPP 177 (354)
Q Consensus 111 ---~~~~e----ei~~~~---~~~~~~QLy~~~d~~~~~~~~~~a~~---~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~ 177 (354)
+..++ ++.+.. ..+.++++.. .+.+...+..+++++ .++++|+||+.||.. |.
T Consensus 105 G~~n~G~~~~~~~~~~~~~~~~~pvivsi~g-~~~~~~~~~~~~~~~~~~~~ad~ielNiScPn~-------------~g 170 (354)
T 3tjx_A 105 GLPNNGFDFYLAYAAEQHDYGKKPLFLSMSG-LSMRENVEMCKRLAAVATEKGVILELNLSCPNV-------------PG 170 (354)
T ss_dssp CCCBCCHHHHHHHHHHTCCTTTCCEEEEECC-SSHHHHHHHHHHHHHHHHHHCCEEEEECC-------------------
T ss_pred ccCCHHHHHHHHHHHHhhccCCceEEEEEec-CChHHHHHHHHHHHHhhhcCCCEEEeeeCCCCC-------------cc
Confidence 11222 222221 1567888864 566666666655544 378999999999963 10
Q ss_pred cCccccccCCccCcCcccchhhHHHHHhh-hcCCccccc--ccC---CHHHHHHHHHhC-CCEEEEecCCc---------
Q 018519 178 FLTLKNFQGLDLGKMDEANDSGLAAYVAG-QIDRSLSWK--GVL---TAEDARIAVQAG-AAGIIVSNHGA--------- 241 (354)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~w~--Gi~---~~~~a~~~~~~G-~d~I~vs~~gg--------- 241 (354)
+ +.+.. +......+.+.+.. ...|...+. ++. ....+..+.+.+ ++++..-|+-.
T Consensus 171 ~---~~l~~------~~~~~~~i~~~v~~~~~~pv~vK~~p~~~~~~~~~~~~~~~~~~~~~~i~~i~t~~~~~~id~~~ 241 (354)
T 3tjx_A 171 K---PQVAY------DFDAMRQCLTAVSEVYPHSFGVKMPPYFDFAAFDAAAEILNEFPKVQFITCINSIGNGLVIDAET 241 (354)
T ss_dssp ------CTT------SHHHHHHHHHHHHHHCCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTT
T ss_pred h---hhhcc------CHHHHHHHHHHHHHHhhcccccccCCCCCchhHHHHHHHHHhhcccchhheeccccccccccccc
Confidence 0 00000 00111222222222 222322221 111 112233334443 44443322210
Q ss_pred ----------CCCCCCcChHHH----HHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHHHHHhhcCHHH
Q 018519 242 ----------RQLDYVPATIMA----LEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKG 307 (354)
Q Consensus 242 ----------~~~~~~~~~~~~----l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l~~~~~~G~~g 307 (354)
.+..+|++.+.. +.++++.+ .++|||++|||+|++|++++|.+|||+||+||.++| .|+.
T Consensus 242 ~~~~~~~~~~~GGlSG~~~~~~a~~~v~~~~~~~-~~~pIIg~GGI~s~~Da~e~i~aGAs~Vqv~Ta~~y----~GP~- 315 (354)
T 3tjx_A 242 ESVVIKPKQGFGGLGGRYVLPTALANINAFYRRC-PGKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQE----EGPS- 315 (354)
T ss_dssp TEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHC-TTSEEEEESSCCSHHHHHHHHHHTEEEEEECHHHHH----HCTT-
T ss_pred ccccccCcccccccCchhhHHHHHHHHHHHHHhc-CCCcEEEeCCcCCHHHHHHHHHcCCCEEEEChhhhh----cCch-
Confidence 111235555543 34444443 378999999999999999999999999999999988 3544
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCChhhhcccce
Q 018519 308 VRRVLEMLREEFELAMALSGCRSLKEITRDHI 339 (354)
Q Consensus 308 v~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l 339 (354)
++..+.+||+.+|...|+++++|+++..-
T Consensus 316 ---~~~~I~~~L~~~L~~~G~~si~e~~G~~~ 344 (354)
T 3tjx_A 316 ---IFERLTSELLGVMAKKRYQTLDEFRGKVR 344 (354)
T ss_dssp ---HHHHHHHHHHHHHHHHTCCSGGGTTTCCB
T ss_pred ---HHHHHHHHHHHHHHHcCCCCHHHHhChhh
Confidence 67889999999999999999999998643
No 43
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=99.75 E-value=7e-17 Score=154.81 Aligned_cols=195 Identities=19% Similarity=0.201 Sum_probs=138.7
Q ss_pred eEcCeeeccceEecccccccccCChhhHHHHHHHHHcCCcEEecCCCCCCHHHH-------HhhCCCceEEEEeecC---
Q 018519 64 TVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEV-------ASTGPGIRFFQLYVYK--- 133 (354)
Q Consensus 64 ~l~g~~l~~Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~s~~~~~~~eei-------~~~~~~~~~~QLy~~~--- 133 (354)
++++ ++.||+++||++.+ +..++.++.++|...++......+.+++ ++....++.++++...
T Consensus 10 ~~l~--~~~Pii~apM~gvs------~~~la~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~~ 81 (328)
T 2gjl_A 10 ETFG--VEHPIMQGGMQWVG------RAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQK 81 (328)
T ss_dssp HHHT--CSSSEEECCCTTTC------SHHHHHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHHCSSCCEEEEEECCCSS
T ss_pred HHhC--CCCCEEECCCCCCC------cHHHHHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecccccc
Confidence 3555 56899999998654 5689999999998777754332335443 2223357788988741
Q ss_pred ChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCccc
Q 018519 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLS 213 (354)
Q Consensus 134 d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (354)
+++ ..+.++.+.+.|++.+.++.++|. . +.+.+.....+ .
T Consensus 82 ~~~-~~~~~~~~~~~g~d~V~~~~g~p~---~----------------------------------~~~~l~~~gi~--v 121 (328)
T 2gjl_A 82 PVP-YAEYRAAIIEAGIRVVETAGNDPG---E----------------------------------HIAEFRRHGVK--V 121 (328)
T ss_dssp CCC-HHHHHHHHHHTTCCEEEEEESCCH---H----------------------------------HHHHHHHTTCE--E
T ss_pred Ccc-HHHHHHHHHhcCCCEEEEcCCCcH---H----------------------------------HHHHHHHcCCC--E
Confidence 222 457788889999999999987662 0 01111111111 2
Q ss_pred ccccCCHHHHHHHHHhCCCEEEEecC--CcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEE
Q 018519 214 WKGVLTAEDARIAVQAGAAGIIVSNH--GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIF 291 (354)
Q Consensus 214 w~Gi~~~~~a~~~~~~G~d~I~vs~~--gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~ 291 (354)
|..+.+.++++.+.++|+|+|+++|. ||+......++++.++++++.+ ++|||++|||++++|+.+++++|||+|+
T Consensus 122 i~~v~t~~~a~~~~~~GaD~i~v~g~~~GG~~G~~~~~~~~~l~~v~~~~--~iPviaaGGI~~~~~v~~al~~GAdgV~ 199 (328)
T 2gjl_A 122 IHKCTAVRHALKAERLGVDAVSIDGFECAGHPGEDDIPGLVLLPAAANRL--RVPIIASGGFADGRGLVAALALGADAIN 199 (328)
T ss_dssp EEEESSHHHHHHHHHTTCSEEEEECTTCSBCCCSSCCCHHHHHHHHHTTC--CSCEEEESSCCSHHHHHHHHHHTCSEEE
T ss_pred EeeCCCHHHHHHHHHcCCCEEEEECCCCCcCCCCccccHHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCCCEEE
Confidence 23467899999999999999999774 4442222457889999988876 7999999999999999999999999999
Q ss_pred EcHHHHHHHhhcCHHHH
Q 018519 292 IGRPVVYSLAAEGEKGV 308 (354)
Q Consensus 292 igr~~l~~~~~~G~~gv 308 (354)
+||+|+....+.+.+..
T Consensus 200 vGs~~~~~~e~~~~~~~ 216 (328)
T 2gjl_A 200 MGTRFLATRECPIHPAV 216 (328)
T ss_dssp ESHHHHTSSSSCSCHHH
T ss_pred ECHHHHcCccccccHHH
Confidence 99999876544443433
No 44
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.73 E-value=4.3e-17 Score=164.33 Aligned_cols=118 Identities=25% Similarity=0.360 Sum_probs=87.3
Q ss_pred cCCHHHHHHHHHhCCCEEEEecCCcCC-------CCCCcChHHHHHHHHHHhcC-CccEEEcCCCCCHHHHHHHHHcCcC
Q 018519 217 VLTAEDARIAVQAGAAGIIVSNHGARQ-------LDYVPATIMALEEVVKATQG-RIPVFLDGGVRRGTDVFKALALGAS 288 (354)
Q Consensus 217 i~~~~~a~~~~~~G~d~I~vs~~gg~~-------~~~~~~~~~~l~~i~~~~~~-~i~vi~~GGi~~g~dv~kalalGAd 288 (354)
|.++++++.+. |+|+|.| |.|+.. ..+|.++...|.++.+.... ++|||++|||+++.|++|||++|||
T Consensus 276 v~~~~~a~~l~--G~d~v~v-g~g~g~~~~~r~~~~~g~~~~~~l~~~~~~~~~~~vpVia~GGi~~~~di~kalalGA~ 352 (486)
T 2cu0_A 276 IANPKAVDDLT--FADAVKV-GIGPGSICTTRIVAGVGVPQITAVAMVADRAQEYGLYVIADGGIRYSGDIVKAIAAGAD 352 (486)
T ss_dssp ECCHHHHTTCT--TSSEEEE-CSSCSTTBCHHHHTCCCCCHHHHHHHHHHHHHHHTCEEEEESCCCSHHHHHHHHHTTCS
T ss_pred cCCHHHHHHhh--CCCeEEE-eeeeccceeeeEEeecCcchHHHHHHHHHHHHHcCCcEEecCCCCCHHHHHHHHHcCCC
Confidence 33555555555 6666666 433322 23456677766666554321 7999999999999999999999999
Q ss_pred EEEEcHHHHH--------------------HHhhcC----------------------HHH----------HHHHHHHHH
Q 018519 289 GIFIGRPVVY--------------------SLAAEG----------------------EKG----------VRRVLEMLR 316 (354)
Q Consensus 289 ~V~igr~~l~--------------------~~~~~G----------------------~~g----------v~~~l~~l~ 316 (354)
+|++|++|+. ++++.| ++| +..+++.|.
T Consensus 353 ~v~~g~~~~~~~e~~~~~~~~~g~~~k~~~g~~~~~a~~~~~~~r~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~ 432 (486)
T 2cu0_A 353 AVMLGNLLAGTKEAPGKEVIINGRKYKQYRGMGSLGAMMKGGAERYYQGGYMKTRKFVPEGVEGVVPYRGTVSEVLYQLV 432 (486)
T ss_dssp EEEESTTTTTBTTCCSCEEEETTEEEEEEECTTSHHHHTC----------CCCCSCSSCCBCEEEEECCBCHHHHHHHHH
T ss_pred ceeeChhhhcCccCchhheeeCCcEEEEeecCCCHHHHhcccccccccccccccccccccceEEeecccCCHHHHHHHHH
Confidence 9999999983 221111 233 889999999
Q ss_pred HHHHHHHHHhCCCChhhhccc
Q 018519 317 EEFELAMALSGCRSLKEITRD 337 (354)
Q Consensus 317 ~el~~~m~~~G~~~i~~l~~~ 337 (354)
.+|+..|.++|+.++.+|+..
T Consensus 433 ~~lr~~m~~~G~~~~~~l~~~ 453 (486)
T 2cu0_A 433 GGLKAGMGYVGARNIRELKEK 453 (486)
T ss_dssp HHHHHHHHHTTCSBHHHHHHH
T ss_pred HHHHHhcccCCcCCHHHHHhh
Confidence 999999999999999999754
No 45
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=99.73 E-value=2e-16 Score=151.93 Aligned_cols=182 Identities=21% Similarity=0.227 Sum_probs=133.0
Q ss_pred EcCeeeccceEecccccccccCChhhHHHHHHHHHcCCcEEecCCCCCCHHHH-------HhhCCCceEEEEeecCChHH
Q 018519 65 VLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEV-------ASTGPGIRFFQLYVYKDRNV 137 (354)
Q Consensus 65 l~g~~l~~Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~s~~~~~~~eei-------~~~~~~~~~~QLy~~~d~~~ 137 (354)
++| ++.||+++||++.+ +..++.++.++|...++... ..+.+++ .+....++.+|++.. ++.
T Consensus 8 ~l~--~~~Pii~apM~g~s------~~~la~av~~aG~lG~i~~~-~~~~~~~~~~i~~i~~~~~~p~gvnl~~~-~~~- 76 (332)
T 2z6i_A 8 LLK--IDYPIFQGGMAWVA------DGDLAGAVSKAGGLGIIGGG-NAPKEVVKANIDKIKSLTDKPFGVNIMLL-SPF- 76 (332)
T ss_dssp HHT--CSSSEEECCCTTTC------CHHHHHHHHHHTSBEEEECT-TCCHHHHHHHHHHHHHHCCSCEEEEECTT-STT-
T ss_pred HhC--CCCCEEeCCCCCCC------cHHHHHHHHhCCCcEEeCCC-CCCHHHHHHHHHHHHHhcCCCEEEEecCC-CCC-
Confidence 455 67999999998644 45799999999985555432 2344433 222335788999752 333
Q ss_pred HHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCccccccc
Q 018519 138 VAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKGV 217 (354)
Q Consensus 138 ~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~Gi 217 (354)
..+.++++.++|++.+.++.++|.. + +..+ .....+. +-.+
T Consensus 77 ~~~~~~~a~~~g~d~V~~~~g~p~~----------~--------------------------i~~l-~~~g~~v--~~~v 117 (332)
T 2z6i_A 77 VEDIVDLVIEEGVKVVTTGAGNPSK----------Y--------------------------MERF-HEAGIIV--IPVV 117 (332)
T ss_dssp HHHHHHHHHHTTCSEEEECSSCGGG----------T--------------------------HHHH-HHTTCEE--EEEE
T ss_pred HHHHHHHHHHCCCCEEEECCCChHH----------H--------------------------HHHH-HHcCCeE--EEEe
Confidence 4577888999999999998876621 0 1111 1111111 1235
Q ss_pred CCHHHHHHHHHhCCCEEEEecC--CcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHH
Q 018519 218 LTAEDARIAVQAGAAGIIVSNH--GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRP 295 (354)
Q Consensus 218 ~~~~~a~~~~~~G~d~I~vs~~--gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~ 295 (354)
.+.++++.+.++|+|+|+++|. ||+. +..++++.++++++.+ ++|||++|||.+++|+.+++++|||+|++||+
T Consensus 118 ~~~~~a~~~~~~GaD~i~v~g~~~GG~~--g~~~~~~ll~~i~~~~--~iPViaaGGI~~~~~~~~al~~GAdgV~vGs~ 193 (332)
T 2z6i_A 118 PSVALAKRMEKIGADAVIAEGMEAGGHI--GKLTTMTLVRQVATAI--SIPVIAAGGIADGEGAAAGFMLGAEAVQVGTR 193 (332)
T ss_dssp SSHHHHHHHHHTTCSCEEEECTTSSEEC--CSSCHHHHHHHHHHHC--SSCEEEESSCCSHHHHHHHHHTTCSEEEECHH
T ss_pred CCHHHHHHHHHcCCCEEEEECCCCCCCC--CCccHHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCCCEEEecHH
Confidence 7899999999999999999875 5542 2467889999999887 89999999999999999999999999999999
Q ss_pred HHHHH
Q 018519 296 VVYSL 300 (354)
Q Consensus 296 ~l~~~ 300 (354)
|+...
T Consensus 194 ~l~~~ 198 (332)
T 2z6i_A 194 FVVAK 198 (332)
T ss_dssp HHTBT
T ss_pred HhcCc
Confidence 98754
No 46
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=99.71 E-value=5.9e-16 Score=150.73 Aligned_cols=183 Identities=21% Similarity=0.219 Sum_probs=128.1
Q ss_pred ccceEeccccc-ccccCChhhHHHHHHHHHcCCcEEecCCCCCCHHHHH-------hhCCCceEEEEeecCCh----H--
Q 018519 71 SMPIMIAPTAM-QKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA-------STGPGIRFFQLYVYKDR----N-- 136 (354)
Q Consensus 71 ~~Pi~iAPm~~-~~l~~~~~e~~la~aa~~~G~~~~~s~~~~~~~eei~-------~~~~~~~~~QLy~~~d~----~-- 136 (354)
..||+.|||++ .+ +..++.++.++|...+++.. ..+.+++. +..+.|+.+|++...+. +
T Consensus 10 ~~Pii~apMaggvs------~~~la~av~~aGglG~i~~~-~~s~~~l~~~i~~~~~~~~~p~gVnl~~~~~~~~~~~~~ 82 (369)
T 3bw2_A 10 PLPIVQAPMAGGVS------VPQLAAAVCEAGGLGFLAAG-YKTADGMYQEIKRLRGLTGRPFGVNVFMPQPELAESGAV 82 (369)
T ss_dssp SSSEEECCCTTTTS------CHHHHHHHHHTTSBEEEECT-TSCHHHHHHHHHHHHHHCCSCEEEEEECCCCCC---CHH
T ss_pred cCCEEeCCCCCCCC------cHHHHHHHHHCCCEEEcCCC-CCCHHHHHHHHHHHHHhCCCCeEEEEecCCCCcccHHHH
Confidence 78999999985 44 56899999999987777642 34555442 22345778888764331 0
Q ss_pred ---------------------------HHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCcc
Q 018519 137 ---------------------------VVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDL 189 (354)
Q Consensus 137 ---------------------------~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~ 189 (354)
...+.++.+.+.|++.+.++.++|..
T Consensus 83 ~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~V~~~~g~~~~--------------------------- 135 (369)
T 3bw2_A 83 EVYAHQLAGEAAWYETELGDPDGGRDDGYDAKLAVLLDDPVPVVSFHFGVPDR--------------------------- 135 (369)
T ss_dssp HHHHHHTHHHHHHTTCCCCCSCSCSSTTHHHHHHHHHHSCCSEEEEESSCCCH---------------------------
T ss_pred HHHHHHHHHHHHHcCCCcCcccccccccHHHHHHHHHhcCCCEEEEeCCCCcH---------------------------
Confidence 12445566666777777777665520
Q ss_pred CcCcccchhhHHHHHhhhcCCcccccccCCHHHHHHHHHhCCCEEEEecC--CcC---CCCC----C--cChHHHHHHHH
Q 018519 190 GKMDEANDSGLAAYVAGQIDRSLSWKGVLTAEDARIAVQAGAAGIIVSNH--GAR---QLDY----V--PATIMALEEVV 258 (354)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~w~Gi~~~~~a~~~~~~G~d~I~vs~~--gg~---~~~~----~--~~~~~~l~~i~ 258 (354)
.-+..+.+ . ....|..+.++++++.+.++|+|+|+++|. ||+ .... + .++++.+++++
T Consensus 136 --------~~i~~~~~-~--g~~v~~~v~t~~~a~~a~~~GaD~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~ 204 (369)
T 3bw2_A 136 --------EVIARLRR-A--GTLTLVTATTPEEARAVEAAGADAVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVR 204 (369)
T ss_dssp --------HHHHHHHH-T--TCEEEEEESSHHHHHHHHHTTCSEEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHH
T ss_pred --------HHHHHHHH-C--CCeEEEECCCHHHHHHHHHcCCCEEEEeCCCcCCcCCCcccccccccccccHHHHHHHHH
Confidence 00111111 1 123445678999999999999999999774 333 2111 1 34588899998
Q ss_pred HHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHHHHH
Q 018519 259 KATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSL 300 (354)
Q Consensus 259 ~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l~~~ 300 (354)
+.+ ++|||++|||++++++.+++++|||+|++||.|+..-
T Consensus 205 ~~~--~iPViaaGGI~~~~~~~~~l~~GAd~V~vGs~~~~~~ 244 (369)
T 3bw2_A 205 EAV--DIPVVAAGGIMRGGQIAAVLAAGADAAQLGTAFLATD 244 (369)
T ss_dssp HHC--SSCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTST
T ss_pred Hhc--CceEEEECCCCCHHHHHHHHHcCCCEEEEChHHhCCc
Confidence 876 8999999999999999999999999999999998643
No 47
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=99.49 E-value=7.7e-14 Score=159.22 Aligned_cols=206 Identities=17% Similarity=0.204 Sum_probs=139.4
Q ss_pred eeccccCC-CCCCccceeE---cCeeeccceEeccccc-ccccCChhhHHHHHHHHHcCCcEEecCCCCCCHHHHH----
Q 018519 48 FRPRILID-VSKIDMNTTV---LGFKISMPIMIAPTAM-QKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA---- 118 (354)
Q Consensus 48 l~pr~l~~-~~~vd~st~l---~g~~l~~Pi~iAPm~~-~~l~~~~~e~~la~aa~~~G~~~~~s~~~~~~~eei~---- 118 (354)
|.||..+. ..+++++|.| +| ..||+.|||++ .+ +..|+.+++++|...+++.....+.|++.
T Consensus 558 f~prlv~~~~~~~~l~t~~t~~lg---~~PIi~a~M~~~vs------~~~LaaAva~aGglG~i~g~g~~~~e~l~~~i~ 628 (2060)
T 2uva_G 558 HGPRLVKTSVGQTFVDTKMSRLLG---VPPVMVAGMTPTTV------PWDFVAATMNAGYHIELAGGGYYNAQKMSDAIS 628 (2060)
T ss_dssp HCCEEEECTTCCEEEECHHHHHHT---SCSEEECCCTTTTC------SHHHHHHHHHTTCEECEEGGGCCSHHHHHHHHH
T ss_pred cCCcceecCCCceecchhhhhccc---cceEEecCCCCccc------cHHHHHHHHHCCCEEEECcCCCCCHHHHHHHHH
Confidence 46766542 3345566554 45 58999999984 33 55899999999999999444445565442
Q ss_pred ---hhC--CCceEEEEeecCChH---HHHHHHHHHHHcCCCE--EEEecCCCCCCchhHHhhhccCCCCcCccccccCCc
Q 018519 119 ---STG--PGIRFFQLYVYKDRN---VVAQLVRRAERAGFKA--IALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLD 188 (354)
Q Consensus 119 ---~~~--~~~~~~QLy~~~d~~---~~~~~~~~a~~~G~~a--i~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~ 188 (354)
+.. ..++.+++... ++. ...++++.+.+.|++. +.+..+.|..
T Consensus 629 ~vk~~~~~~~p~gvN~~~~-~p~~~~~~~~~~~~~~~~gv~i~gv~~~~G~p~~-------------------------- 681 (2060)
T 2uva_G 629 KIEKAIPPGRGITVNLIYV-NPRAMGWQIPLLGRLRADGVPIEGLTIGAGVPSI-------------------------- 681 (2060)
T ss_dssp HHGGGSCTTCCEEEEEETT-CTTHHHHHHHHHHHHHTTTCCEEEEEEESSCCCH--------------------------
T ss_pred HHHhhcccCCCeEeccccc-CcccchhHHHHHHHHHHcCCCcceEeecCCCCCH--------------------------
Confidence 223 25677887643 333 2457888889999988 6665544420
Q ss_pred cCcCcccchhhHHHHHhhhcCCcccccccCCHHHHHHH----HHhCCCEEE---EecC--CcC-C-CCCCcChHHHHHHH
Q 018519 189 LGKMDEANDSGLAAYVAGQIDRSLSWKGVLTAEDARIA----VQAGAAGII---VSNH--GAR-Q-LDYVPATIMALEEV 257 (354)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~w~Gi~~~~~a~~~----~~~G~d~I~---vs~~--gg~-~-~~~~~~~~~~l~~i 257 (354)
..+.++++....+.+. -+.+..+|.++ .++|+|+|+ +.|. ||+ . .+...+.+..+++|
T Consensus 682 ---------e~~~~~l~~~gi~~i~--~v~~~~~a~~~v~~l~~aG~D~iV~~q~~G~eaGGH~g~~d~~~~~l~lv~~i 750 (2060)
T 2uva_G 682 ---------EVANEYIQTLGIRHIS--FKPGSVDAIQQVINIAKANPTFPIILQWTGGRGGGHHSFEDFHQPILLMYSRI 750 (2060)
T ss_dssp ---------HHHHHHHHHSCCSEEE--ECCCSHHHHHHHHHHHHHCTTSCEEEEECCTTSSSSCCSCCSHHHHHHHHHHH
T ss_pred ---------HHHHHHHHHcCCeEEE--ecCCHHHHHHHHHHHHHcCCCEEEEeeeEcccCCCCCCcccccchHHHHHHHH
Confidence 0122333333223322 23455677766 999999999 7652 343 1 22335677888999
Q ss_pred HHHhcCCccEEEcCCCCCHHHHHHHH-----------HcCcCEEEEcHHHHHHHhh
Q 018519 258 VKATQGRIPVFLDGGVRRGTDVFKAL-----------ALGASGIFIGRPVVYSLAA 302 (354)
Q Consensus 258 ~~~~~~~i~vi~~GGi~~g~dv~kal-----------alGAd~V~igr~~l~~~~~ 302 (354)
++.+ ++|||++|||.++.|+++|| ++|||+|++|+.|+.+.-+
T Consensus 751 ~~~~--~ipviaaGGI~~g~~i~aaltg~ws~~~g~palGAdgV~~GT~f~~t~Ea 804 (2060)
T 2uva_G 751 RKCS--NIVLVAGSGFGGSEDTYPYLTGSWSTKFGYPPMPFDGCMFGSRMMTAKEA 804 (2060)
T ss_dssp HTST--TEEEEEESSCCSHHHHHHHHHTCGGGTTTSCCCCCSCEEESGGGGGBTTS
T ss_pred HHHc--CCCEEEeCCCCCHHHHHHHhcCcchhhcCCCCCCCCEEEEchhhhcCcCC
Confidence 8877 79999999999999999999 9999999999999865444
No 48
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=99.46 E-value=1.1e-11 Score=119.15 Aligned_cols=216 Identities=18% Similarity=0.148 Sum_probs=130.0
Q ss_pred ceeEcCeeeccceEecccccccccCChh---hH--H-HHHHHHHcCCcEEecCCCCC--------------CHH------
Q 018519 62 NTTVLGFKISMPIMIAPTAMQKMAHPEG---EY--A-TARAASAAGTIMTLSSWSTS--------------SVE------ 115 (354)
Q Consensus 62 st~l~g~~l~~Pi~iAPm~~~~l~~~~~---e~--~-la~aa~~~G~~~~~s~~~~~--------------~~e------ 115 (354)
..+|++.+++++|++|||+...-..+++ +. . +++-| +.|+.++++++... +.+
T Consensus 8 p~~ig~~~l~NRiv~aPm~~~~~~~~~g~~~~~~~~~y~~rA-~gG~gliite~~~v~~~g~~~~~~~~i~~d~~~~~~~ 86 (338)
T 1z41_A 8 PITIKDMTLKNRIVMSPMCMYSSHEKDGKLTPFHMAHYISRA-IGQVGLIIVEASAVNPQGRITDQDLGIWSDEHIEGFA 86 (338)
T ss_dssp CEEETTEEESSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHH-HTTCSEEEEEEEESSGGGCSSTTSCBCSSTHHHHHHH
T ss_pred CeeECCEEEcCccEECCcCCCcCCCCCCCCCHHHHHHHHHHH-cCCCCEEEeCCeeccccccCCCCCcccCCHHHHHHHH
Confidence 3678999999999999998664210222 22 2 23333 45788887765311 112
Q ss_pred HHHh---hCCCceEEEEeec----------------------CCh------------HHHHHHHHHHHHcCCCEEEEecC
Q 018519 116 EVAS---TGPGIRFFQLYVY----------------------KDR------------NVVAQLVRRAERAGFKAIALTVD 158 (354)
Q Consensus 116 ei~~---~~~~~~~~QLy~~----------------------~d~------------~~~~~~~~~a~~~G~~ai~i~vd 158 (354)
++.+ ....+.++||+.. ..+ +...+.+++++++||++|.||..
T Consensus 87 ~~~~~vh~~g~~i~~QL~h~Gr~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~~i~~~~~aA~~a~~aGfDgVeih~~ 166 (338)
T 1z41_A 87 KLTEQVKEQGSKIGIQLAHAGRKAELEGDIFAPSAIAFDEQSATPVEMSAEKVKETVQEFKQAAARAKEAGFDVIEIHAA 166 (338)
T ss_dssp HHHHHHHHTTCEEEEEEECCGGGCCCSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEC
T ss_pred HHHHHHHhcCCEEEEEecCCCcccCCCCCCcCCCCCCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeccc
Confidence 2221 2236789999742 112 34556778888999999999998
Q ss_pred C---------CCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhh-HHHHHhhhcCCccccc---------cc--
Q 018519 159 T---------PRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSG-LAAYVAGQIDRSLSWK---------GV-- 217 (354)
Q Consensus 159 ~---------p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~w~---------Gi-- 217 (354)
| |....|.. .+ |-+.. .+. ....+ +.++.+.+..| +..+ |.
T Consensus 167 ~gyLl~qFlsp~~n~R~d----~y----GGsle--nr~-------r~~~eiv~avr~~v~~p-v~vris~~~~~~~g~~~ 228 (338)
T 1z41_A 167 HGYLIHEFLSPLSNHRTD----EY----GGSPE--NRY-------RFLREIIDEVKQVWDGP-LFVRVSASDYTDKGLDI 228 (338)
T ss_dssp TTSHHHHHHCTTTCCCCS----TT----SSSHH--HHH-------HHHHHHHHHHHHHCCSC-EEEEEECCCCSTTSCCH
T ss_pred cchHHHHccCCCcCCcCc----cc----Ccchh--hhH-------HHHHHHHHHHHHHcCCc-EEEEecCcccCCCCCCH
Confidence 7 43211110 00 00000 000 00111 22222222222 2111 32
Q ss_pred -CCHHHHHHHHHhCCCEEEEecCCcC-C-CCCCc-ChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcC-cCEEEE
Q 018519 218 -LTAEDARIAVQAGAAGIIVSNHGAR-Q-LDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFI 292 (354)
Q Consensus 218 -~~~~~a~~~~~~G~d~I~vs~~gg~-~-~~~~~-~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalG-Ad~V~i 292 (354)
...+.++.+.++|+|+|.|++.... + ...++ ..++.+.++++.+ ++|||+.|||++++++.++|+.| ||+|++
T Consensus 229 ~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~--~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~i 306 (338)
T 1z41_A 229 ADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQA--DMATGAVGMITDGSMAEEILQNGRADLIFI 306 (338)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH--CCEEEECSSCCSHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHC--CCCEEEECCCCCHHHHHHHHHcCCceEEee
Confidence 1235567888999999999763211 1 11222 2467788888888 89999999999999999999998 999999
Q ss_pred cHHHHH
Q 018519 293 GRPVVY 298 (354)
Q Consensus 293 gr~~l~ 298 (354)
||+++.
T Consensus 307 GR~~i~ 312 (338)
T 1z41_A 307 GRELLR 312 (338)
T ss_dssp CHHHHH
T ss_pred cHHHHh
Confidence 999885
No 49
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=99.40 E-value=2.9e-11 Score=117.41 Aligned_cols=215 Identities=15% Similarity=0.118 Sum_probs=133.0
Q ss_pred ceeEcCeeeccceEecccccccccCChh---hHHHHHHHHHcCCcEEecCCCCC--------------CHHH------HH
Q 018519 62 NTTVLGFKISMPIMIAPTAMQKMAHPEG---EYATARAASAAGTIMTLSSWSTS--------------SVEE------VA 118 (354)
Q Consensus 62 st~l~g~~l~~Pi~iAPm~~~~l~~~~~---e~~la~aa~~~G~~~~~s~~~~~--------------~~ee------i~ 118 (354)
..+|.+.++++.|++|||+...-..+++ +..++--++++|+.++++++... +.+. +.
T Consensus 8 P~~ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rAg~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~~~l~ 87 (364)
T 1vyr_A 8 PLKVGAVTAPNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRASAGLIISEATQISAQAKGYAGAPGLHSPEQIAAWKKIT 87 (364)
T ss_dssp CEEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHHTTTSSEEEEEEEESSSTTCCSTTCCBSSSHHHHHHHHHHH
T ss_pred CeeECCEEECCccEECCCCCCcccCCCCCCCHHHHHHHHHHhcCCEEEEccccccccccCCCCCcccCCHHHHHHHHHHH
Confidence 3678899999999999998754212332 56777778888988888765211 2222 22
Q ss_pred h---hCCCceEEEEeec-----------------------------------------CCh------------HHHHHHH
Q 018519 119 S---TGPGIRFFQLYVY-----------------------------------------KDR------------NVVAQLV 142 (354)
Q Consensus 119 ~---~~~~~~~~QLy~~-----------------------------------------~d~------------~~~~~~~ 142 (354)
+ ....+.++||+.. ..+ +...+.+
T Consensus 88 ~~vh~~g~~i~~QL~H~Gr~~~~~~~~~g~~~~apS~i~~~~~~~~~~~~g~~~~~~~~~p~~mt~~eI~~~i~~f~~aA 167 (364)
T 1vyr_A 88 AGVHAEDGRIAVQLWHTGRISHSSIQPGGQAPVSASALNANTRTSLRDENGNAIRVDTTTPRALELDEIPGIVNDFRQAV 167 (364)
T ss_dssp HHHHHTTCCEEEEEECCTTSSCGGGSGGGCCCEESSSCCCCSEEEEECTTSCEEEEECCCCEECCGGGHHHHHHHHHHHH
T ss_pred HHHHhcCCeEEEEeccCCcccCcccccCCCccccCCCcccccccccccccccccccCCCCCCcCCHHHHHHHHHHHHHHH
Confidence 1 2236789999720 112 3556677
Q ss_pred HHHHHcCCCEEEEecCC---------CCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhh-HHHHHhhhcCCcc
Q 018519 143 RRAERAGFKAIALTVDT---------PRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSG-LAAYVAGQIDRSL 212 (354)
Q Consensus 143 ~~a~~~G~~ai~i~vd~---------p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 212 (354)
++|+++||++|.||..| |..-.|.. .+ |-+.. .+. ....+ +.++.+.+...++
T Consensus 168 ~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D----~y----GGsle--nr~-------r~~~eiv~avr~~vg~~~v 230 (364)
T 1vyr_A 168 ANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTD----QY----GGSVE--NRA-------RLVLEVVDAVCNEWSADRI 230 (364)
T ss_dssp HHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCS----TT----SSSHH--HHT-------HHHHHHHHHHHHHSCGGGE
T ss_pred HHHHHcCCCEEEEcCccchHHHhccCCcccccCC----cC----Ccchh--cCh-------hhHHHHHHHHHHhcCCCcE
Confidence 88899999999999987 33211100 00 00000 000 00111 2222222221122
Q ss_pred c--------cccc----CCHH----HHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCH
Q 018519 213 S--------WKGV----LTAE----DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG 276 (354)
Q Consensus 213 ~--------w~Gi----~~~~----~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g 276 (354)
+ |.|+ .+.+ .++.+.++|+|+|.+++.+-.+.. ...++.+.++++.+ ++|||+.||| ++
T Consensus 231 ~vrls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~--~~~~~~~~~v~~~~--~iPvi~~Ggi-t~ 305 (364)
T 1vyr_A 231 GIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGGK--PYSEAFRQKVRERF--HGVIIGAGAY-TA 305 (364)
T ss_dssp EEEECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBCC--CCCHHHHHHHHHHC--CSEEEEESSC-CH
T ss_pred EEEEccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCCC--cccHHHHHHHHHHC--CCCEEEECCc-CH
Confidence 1 3221 1333 478889999999999763211111 12467788888887 7999999999 99
Q ss_pred HHHHHHHHcC-cCEEEEcHHHHH
Q 018519 277 TDVFKALALG-ASGIFIGRPVVY 298 (354)
Q Consensus 277 ~dv~kalalG-Ad~V~igr~~l~ 298 (354)
+++.++|+.| ||+|++||+++.
T Consensus 306 ~~a~~~l~~g~aD~V~~gR~~l~ 328 (364)
T 1vyr_A 306 EKAEDLIGKGLIDAVAFGRDYIA 328 (364)
T ss_dssp HHHHHHHHTTSCSEEEESHHHHH
T ss_pred HHHHHHHHCCCccEEEECHHHHh
Confidence 9999999988 999999999875
No 50
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=99.37 E-value=2.4e-11 Score=118.45 Aligned_cols=214 Identities=14% Similarity=0.109 Sum_probs=130.7
Q ss_pred ceeEcCeeeccceEecccccccccCChh---hHHHHHHHHHcCCcEEecCCCCC--------------CHHH------HH
Q 018519 62 NTTVLGFKISMPIMIAPTAMQKMAHPEG---EYATARAASAAGTIMTLSSWSTS--------------SVEE------VA 118 (354)
Q Consensus 62 st~l~g~~l~~Pi~iAPm~~~~l~~~~~---e~~la~aa~~~G~~~~~s~~~~~--------------~~ee------i~ 118 (354)
..+|.+.++++.|++|||+...- +++ +..++--++++|+.++++++... +.+. +.
T Consensus 14 P~~ig~~~l~NRiv~aPm~~~~a--~~g~pt~~~~~~y~~rA~~GLiitE~~~v~~~g~~~~~~~gi~~d~~i~~~k~l~ 91 (377)
T 2r14_A 14 PLQLGSLSLPNRVIMAPLTRSRT--PDSVPGRLQQIYYGQRASAGLIISEATNISPTARGYVYTPGIWTDAQEAGWKGVV 91 (377)
T ss_dssp CEEETTEEESCSEEECCCCCCCC--TTSCCCHHHHHHHHHTTTSSCEEEEEEESSGGGCCBTTCCBSSSHHHHHHHHHHH
T ss_pred CeeECCEEecCCeEECCCcCCcC--CCCCCCHHHHHHHHHHhcCCEEEEcceeeccccccCCCCcccCCHHHHHHHHHHH
Confidence 46889999999999999986532 332 56777778888888887765321 1222 22
Q ss_pred h---hCCCceEEEEeec------------------------------------------CCh------------HHHHHH
Q 018519 119 S---TGPGIRFFQLYVY------------------------------------------KDR------------NVVAQL 141 (354)
Q Consensus 119 ~---~~~~~~~~QLy~~------------------------------------------~d~------------~~~~~~ 141 (354)
+ ....+.++||+.. ..+ +...+.
T Consensus 92 ~avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~apS~i~~~~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~~i~~f~~a 171 (377)
T 2r14_A 92 EAVHAKGGRIALQLWHVGRVSHELVQPDGQQPVAPSALKAEGAECFVEFEDGTAGLHPTSTPRALETDEIPGIVEDYRQA 171 (377)
T ss_dssp HHHHHTTCCEEEEEECCTTSCCTTTSGGGCCCEESSSCCCTTCEEEEECTTSCEEEEECCCCEECCGGGHHHHHHHHHHH
T ss_pred HHHhhcCCeEEEEccCCccccccccccCCCcccCCCcccccccccccccccccccccCCCCCccCCHHHHHHHHHHHHHH
Confidence 1 2236789999741 112 355667
Q ss_pred HHHHHHcCCCEEEEecCC---------CCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhh-HHHHHhhhcCCc
Q 018519 142 VRRAERAGFKAIALTVDT---------PRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSG-LAAYVAGQIDRS 211 (354)
Q Consensus 142 ~~~a~~~G~~ai~i~vd~---------p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 211 (354)
+++|+++||++|.||..| |..-.|.. .+ |-+.. .+. ....+ +.++.+.+...+
T Consensus 172 A~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D----~y----GGsle--nR~-------r~~~eiv~aVr~avg~~~ 234 (377)
T 2r14_A 172 AQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTD----QY----GGSIE--NRA-------RFPLEVVDAVAEVFGPER 234 (377)
T ss_dssp HHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCS----TT----SSSHH--HHH-------HHHHHHHHHHHHHHCGGG
T ss_pred HHHHHHcCCCEEEEcCcccchHHhccCCccccCCC----cc----Ccchh--hch-------HHHHHHHHHHHHHcCCCc
Confidence 788889999999999987 54222210 00 00000 000 00111 122222222102
Q ss_pred cccc--------cc---C----CHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCH
Q 018519 212 LSWK--------GV---L----TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG 276 (354)
Q Consensus 212 ~~w~--------Gi---~----~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g 276 (354)
++.+ |+ . ..+.++.+.++|+|+|.|++..-.+...+ ..++.+.++++.+ ++|||++||| ++
T Consensus 235 v~vrls~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~-~~~~~~~~ik~~~--~iPvi~~Ggi-~~ 310 (377)
T 2r14_A 235 VGIRLTPFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDIT-YPEGFREQMRQRF--KGGLIYCGNY-DA 310 (377)
T ss_dssp EEEEECTTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC------C-CCTTHHHHHHHHC--CSEEEEESSC-CH
T ss_pred EEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCc-chHHHHHHHHHHC--CCCEEEECCC-CH
Confidence 2111 11 1 23447888999999999965321111111 1456778888887 7999999999 69
Q ss_pred HHHHHHHHcC-cCEEEEcHHHHH
Q 018519 277 TDVFKALALG-ASGIFIGRPVVY 298 (354)
Q Consensus 277 ~dv~kalalG-Ad~V~igr~~l~ 298 (354)
+++.++|+.| ||+|++||+++.
T Consensus 311 ~~a~~~l~~g~aD~V~igR~~l~ 333 (377)
T 2r14_A 311 GRAQARLDDNTADAVAFGRPFIA 333 (377)
T ss_dssp HHHHHHHHTTSCSEEEESHHHHH
T ss_pred HHHHHHHHCCCceEEeecHHHHh
Confidence 9999999988 999999999885
No 51
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=99.37 E-value=2.1e-11 Score=118.35 Aligned_cols=214 Identities=17% Similarity=0.140 Sum_probs=131.6
Q ss_pred ceeEcCeeeccceEecccccccccCChh---hHHHHHHHHHcCCcEEecCCCCC--------------CHHH------HH
Q 018519 62 NTTVLGFKISMPIMIAPTAMQKMAHPEG---EYATARAASAAGTIMTLSSWSTS--------------SVEE------VA 118 (354)
Q Consensus 62 st~l~g~~l~~Pi~iAPm~~~~l~~~~~---e~~la~aa~~~G~~~~~s~~~~~--------------~~ee------i~ 118 (354)
..+|.+.++++.|++|||+...-..+++ +..++--++++++.++++++... +.+. +.
T Consensus 8 P~~ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rA~~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~~~l~ 87 (365)
T 2gou_A 8 PITLGALTLKNRIVMPPMTRSRASQPGDVANHMMAIYYAQRASAGLIVSEGTQISPTAKGYAWTPGIYTPEQIAGWRIVT 87 (365)
T ss_dssp CEEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHTTTTSSEEEEEEEESSGGGCCSTTCCBSSSHHHHHHHHHHH
T ss_pred CeeECCEEEcCceEECCCCCCcccCCCCCCCHHHHHHHHHHhcCCEEEECceeecccccCCCCCCccCCHHHHHHHHHHH
Confidence 3678899999999999998764211333 56777778888888888765321 1222 22
Q ss_pred h---hCCCceEEEEeec-----------------------------------------CCh------------HHHHHHH
Q 018519 119 S---TGPGIRFFQLYVY-----------------------------------------KDR------------NVVAQLV 142 (354)
Q Consensus 119 ~---~~~~~~~~QLy~~-----------------------------------------~d~------------~~~~~~~ 142 (354)
+ ....+.++||+.. ..+ +...+.+
T Consensus 88 ~~vh~~g~~i~~QL~H~Gr~~~~~~~~g~~~~apS~i~~~~~~~~~~~~~g~~~~~~~~~p~~mt~~eI~~~i~~f~~aA 167 (365)
T 2gou_A 88 EAVHAKGCAIFAQLWHVGRVTHPDNIDGQQPISSSTLKAENVKVFVDNGSDEPGFVDVAVPRAMTKADIAQVIADYRQAA 167 (365)
T ss_dssp HHHHHHSCEEEEEEECCTTSSCGGGTTTCCCEESSSCCCTTCEEEECCSSSSCEEEECCCCEECCHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCeEEEEeecCCCcccccccCCCCccCCCCccccccccccccccccccccCCCCCCcCCHHHHHHHHHHHHHHH
Confidence 1 1235788999730 112 3556677
Q ss_pred HHHHHcCCCEEEEecCC---------CCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhh-HHHHHhhhcCCcc
Q 018519 143 RRAERAGFKAIALTVDT---------PRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSG-LAAYVAGQIDRSL 212 (354)
Q Consensus 143 ~~a~~~G~~ai~i~vd~---------p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 212 (354)
++|+++||++|.||..| |....|.. .+ +-+.. .+. ....+ +.++.+.+...++
T Consensus 168 ~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D----~y----GGsle--nr~-------r~~~eiv~avr~~vg~~pv 230 (365)
T 2gou_A 168 LNAMEAGFDGIELHAANGYLINQFIDSEANNRSD----EY----GGSLE--NRL-------RFLDEVVAALVDAIGAERV 230 (365)
T ss_dssp HHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCS----TT----SSSHH--HHT-------HHHHHHHHHHHHHHCGGGE
T ss_pred HHHHHcCCCEEEEecccchhHhhccCCCccCcCc----cc----Ccchh--hhH-------HHHHHHHHHHHHHcCCCcE
Confidence 78889999999999987 32211100 00 00000 000 00111 2222222211022
Q ss_pred -------ccc----ccCCHHH----HHHHHHhCCCEEEEecCCcCCCCCCc-ChHHHHHHHHHHhcCCccEEEcCCCCCH
Q 018519 213 -------SWK----GVLTAED----ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRG 276 (354)
Q Consensus 213 -------~w~----Gi~~~~~----a~~~~~~G~d~I~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~i~vi~~GGi~~g 276 (354)
.|. +-.+.++ ++.+.++|+|+|.+++.. . ...+ -.++.+.++++.+ ++|||+.||| ++
T Consensus 231 ~vris~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~-~--~~~~~~~~~~~~~i~~~~--~iPvi~~Ggi-~~ 304 (365)
T 2gou_A 231 GVRLAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVD-W--DDAPDTPVSFKRALREAY--QGVLIYAGRY-NA 304 (365)
T ss_dssp EEEECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCB-T--TBCCCCCHHHHHHHHHHC--CSEEEEESSC-CH
T ss_pred EEEEccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCC-c--CCCCCccHHHHHHHHHHC--CCcEEEeCCC-CH
Confidence 221 1123344 788899999999997632 1 1111 1356778888887 7999999999 99
Q ss_pred HHHHHHHHcC-cCEEEEcHHHHH
Q 018519 277 TDVFKALALG-ASGIFIGRPVVY 298 (354)
Q Consensus 277 ~dv~kalalG-Ad~V~igr~~l~ 298 (354)
+++.++|+.| ||+|++||+++.
T Consensus 305 ~~a~~~l~~g~aD~V~igR~~i~ 327 (365)
T 2gou_A 305 EKAEQAINDGLADMIGFGRPFIA 327 (365)
T ss_dssp HHHHHHHHTTSCSEEECCHHHHH
T ss_pred HHHHHHHHCCCcceehhcHHHHh
Confidence 9999999998 999999999885
No 52
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=99.28 E-value=5.9e-10 Score=109.45 Aligned_cols=76 Identities=14% Similarity=0.039 Sum_probs=58.6
Q ss_pred HHHHHHHHHhC------CCEEEEecCCcCCCCCCc--------ChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHc
Q 018519 220 AEDARIAVQAG------AAGIIVSNHGARQLDYVP--------ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL 285 (354)
Q Consensus 220 ~~~a~~~~~~G------~d~I~vs~~gg~~~~~~~--------~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalal 285 (354)
.+.++.+.++| +|+|.|++....+....+ ..++.+.++++.+ ++|||++||| +++++.++|+.
T Consensus 263 ~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~--~iPvi~~G~i-~~~~a~~~l~~ 339 (402)
T 2hsa_B 263 LAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAY--QGTFICSGGY-TRELGIEAVAQ 339 (402)
T ss_dssp HHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHC--SSCEEEESSC-CHHHHHHHHHT
T ss_pred HHHHHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHHC--CCCEEEeCCC-CHHHHHHHHHC
Confidence 45677888999 999999653211111111 2356677788877 7999999999 99999999998
Q ss_pred C-cCEEEEcHHHHH
Q 018519 286 G-ASGIFIGRPVVY 298 (354)
Q Consensus 286 G-Ad~V~igr~~l~ 298 (354)
| ||+|++||++|.
T Consensus 340 g~aD~V~igR~~l~ 353 (402)
T 2hsa_B 340 GDADLVSYGRLFIS 353 (402)
T ss_dssp TSCSEEEESHHHHH
T ss_pred CCCceeeecHHHHh
Confidence 7 999999999875
No 53
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=99.27 E-value=5.7e-10 Score=107.30 Aligned_cols=78 Identities=21% Similarity=0.216 Sum_probs=62.4
Q ss_pred CHHHHHHHHHhCCCEEEEecCCcCC--CCCCc-ChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcC-cCEEEEcH
Q 018519 219 TAEDARIAVQAGAAGIIVSNHGARQ--LDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGR 294 (354)
Q Consensus 219 ~~~~a~~~~~~G~d~I~vs~~gg~~--~~~~~-~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalG-Ad~V~igr 294 (354)
..+.++.+.++|+|+|.|++.+-.. ...++ ..++.+.++++.+ ++|||+.|||++++++.++|+.| ||+|++||
T Consensus 231 ~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~--~iPVi~~GgI~s~e~a~~~L~~G~aD~V~iGR 308 (340)
T 3gr7_A 231 YVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREA--DIPTGAVGLITSGWQAEEILQNGRADLVFLGR 308 (340)
T ss_dssp HHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHT--TCCEEEESSCCCHHHHHHHHHTTSCSEEEECH
T ss_pred HHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHc--CCcEEeeCCCCCHHHHHHHHHCCCeeEEEecH
Confidence 4567888999999999997532111 11122 2567788888888 89999999999999999999998 99999999
Q ss_pred HHHH
Q 018519 295 PVVY 298 (354)
Q Consensus 295 ~~l~ 298 (354)
+++.
T Consensus 309 ~~la 312 (340)
T 3gr7_A 309 ELLR 312 (340)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9885
No 54
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=99.25 E-value=9.6e-11 Score=106.62 Aligned_cols=167 Identities=18% Similarity=0.104 Sum_probs=106.7
Q ss_pred hHHHHHHHHHcCCcEEecCCCCCCHHHHH---hhCCCceEE---EEeec----CChHHHHHHHHHHHHcCCCEEEEecCC
Q 018519 90 EYATARAASAAGTIMTLSSWSTSSVEEVA---STGPGIRFF---QLYVY----KDRNVVAQLVRRAERAGFKAIALTVDT 159 (354)
Q Consensus 90 e~~la~aa~~~G~~~~~s~~~~~~~eei~---~~~~~~~~~---QLy~~----~d~~~~~~~~~~a~~~G~~ai~i~vd~ 159 (354)
-..+|+++.+.|+..+-. .+.+++. +...-|.+- +-|.. .++ +.+.++.+.++|++.+.+....
T Consensus 38 ~~~~A~a~~~~Ga~~i~~----~~~~~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~--~~~~i~~~~~aGad~I~l~~~~ 111 (229)
T 3q58_A 38 VAAMAQAAASAGAVAVRI----EGIENLRTVRPHLSVPIIGIIKRDLTGSPVRITP--YLQDVDALAQAGADIIAFDASF 111 (229)
T ss_dssp HHHHHHHHHHTTCSEEEE----ESHHHHHHHGGGCCSCEEEECBCCCSSCCCCBSC--SHHHHHHHHHHTCSEEEEECCS
T ss_pred HHHHHHHHHHCCCcEEEE----CCHHHHHHHHHhcCCCEEEEEeecCCCCceEeCc--cHHHHHHHHHcCCCEEEECccc
Confidence 358999999999986542 2355554 333333321 11110 111 2244667788999988765421
Q ss_pred CCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCcccccccCCHHHHHHHHHhCCCEEEEecC
Q 018519 160 PRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKGVLTAEDARIAVQAGAAGIIVSNH 239 (354)
Q Consensus 160 p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~Gi~~~~~a~~~~~~G~d~I~vs~~ 239 (354)
-. + |. ....+.+...+.. ....-.+.+.++++++.++|+|.|.+.++
T Consensus 112 ~~---~----------p~------------------~l~~~i~~~~~~g--~~v~~~v~t~eea~~a~~~Gad~Ig~~~~ 158 (229)
T 3q58_A 112 RS---R----------PV------------------DIDSLLTRIRLHG--LLAMADCSTVNEGISCHQKGIEFIGTTLS 158 (229)
T ss_dssp SC---C----------SS------------------CHHHHHHHHHHTT--CEEEEECSSHHHHHHHHHTTCSEEECTTT
T ss_pred cC---C----------hH------------------HHHHHHHHHHHCC--CEEEEecCCHHHHHHHHhCCCCEEEecCc
Confidence 00 0 10 0111222222211 11112578999999999999999987666
Q ss_pred CcCCC-CCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHHH
Q 018519 240 GARQL-DYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 298 (354)
Q Consensus 240 gg~~~-~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l~ 298 (354)
|.+.. ....++++.+.++++. ++|||++|||.|++|+.+++++|||+|++|+.++.
T Consensus 159 g~t~~~~~~~~~~~li~~l~~~---~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsai~~ 215 (229)
T 3q58_A 159 GYTGPITPVEPDLAMVTQLSHA---GCRVIAEGRYNTPALAANAIEHGAWAVTVGSAITR 215 (229)
T ss_dssp TSSSSCCCSSCCHHHHHHHHTT---TCCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHC
T ss_pred cCCCCCcCCCCCHHHHHHHHHc---CCCEEEECCCCCHHHHHHHHHcCCCEEEEchHhcC
Confidence 64321 2245678888888763 79999999999999999999999999999998763
No 55
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=99.24 E-value=3e-10 Score=103.56 Aligned_cols=167 Identities=17% Similarity=0.099 Sum_probs=106.2
Q ss_pred hHHHHHHHHHcCCcEEecCCCCCCHHHH---HhhCCCceEEEE---eec----CChHHHHHHHHHHHHcCCCEEEEecCC
Q 018519 90 EYATARAASAAGTIMTLSSWSTSSVEEV---ASTGPGIRFFQL---YVY----KDRNVVAQLVRRAERAGFKAIALTVDT 159 (354)
Q Consensus 90 e~~la~aa~~~G~~~~~s~~~~~~~eei---~~~~~~~~~~QL---y~~----~d~~~~~~~~~~a~~~G~~ai~i~vd~ 159 (354)
-..+|+++.+.|+..+.. . +.+++ ++...-|.+-+. |.. .++ ..+.++.+.++|++.+.+....
T Consensus 38 ~~~~A~a~~~~Ga~~i~~-~---~~~~i~~ir~~v~~Pvig~~k~d~~~~~~~I~~--~~~~i~~~~~~Gad~V~l~~~~ 111 (232)
T 3igs_A 38 VAAMALAAEQAGAVAVRI-E---GIDNLRMTRSLVSVPIIGIIKRDLDESPVRITP--FLDDVDALAQAGAAIIAVDGTA 111 (232)
T ss_dssp HHHHHHHHHHTTCSEEEE-E---SHHHHHHHHTTCCSCEEEECBCCCSSCCCCBSC--SHHHHHHHHHHTCSEEEEECCS
T ss_pred HHHHHHHHHHCCCeEEEE-C---CHHHHHHHHHhcCCCEEEEEeecCCCcceEeCc--cHHHHHHHHHcCCCEEEECccc
Confidence 358999999999986532 2 35554 443333332111 100 111 2344677888999988765421
Q ss_pred CCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCcccccccCCHHHHHHHHHhCCCEEEEecC
Q 018519 160 PRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKGVLTAEDARIAVQAGAAGIIVSNH 239 (354)
Q Consensus 160 p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~Gi~~~~~a~~~~~~G~d~I~vs~~ 239 (354)
-. + |. ....+.+...+.. ....-.+.+.++++++.++|+|.|.+.++
T Consensus 112 ~~---~----------p~------------------~l~~~i~~~~~~g--~~v~~~v~t~eea~~a~~~Gad~Ig~~~~ 158 (232)
T 3igs_A 112 RQ---R----------PV------------------AVEALLARIHHHH--LLTMADCSSVDDGLACQRLGADIIGTTMS 158 (232)
T ss_dssp SC---C----------SS------------------CHHHHHHHHHHTT--CEEEEECCSHHHHHHHHHTTCSEEECTTT
T ss_pred cC---C----------HH------------------HHHHHHHHHHHCC--CEEEEeCCCHHHHHHHHhCCCCEEEEcCc
Confidence 00 0 10 0111222222211 11112568999999999999999977666
Q ss_pred CcCCC-CCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHHH
Q 018519 240 GARQL-DYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 298 (354)
Q Consensus 240 gg~~~-~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l~ 298 (354)
|.+.. ....++++.+.++++. ++|||++|||.+++|+.+++++|||+|++|+.++.
T Consensus 159 g~t~~~~~~~~~~~~i~~l~~~---~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsal~~ 215 (232)
T 3igs_A 159 GYTTPDTPEEPDLPLVKALHDA---GCRVIAEGRYNSPALAAEAIRYGAWAVTVGSAITR 215 (232)
T ss_dssp TSSSSSCCSSCCHHHHHHHHHT---TCCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHC
T ss_pred cCCCCCCCCCCCHHHHHHHHhc---CCcEEEECCCCCHHHHHHHHHcCCCEEEEehHhcC
Confidence 54321 1245678888888774 79999999999999999999999999999998763
No 56
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=99.24 E-value=3.2e-10 Score=110.49 Aligned_cols=76 Identities=17% Similarity=-0.003 Sum_probs=56.3
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcC-cCEEEEcHHHHH
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVY 298 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalG-Ad~V~igr~~l~ 298 (354)
.+.++.+.++|+|+|.+++..-.+...+...++.+.++++.+ ++|||++||| +++++.++|+.| ||+|++||+++.
T Consensus 259 ~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~vr~~~--~iPvi~~G~i-~~~~a~~~l~~g~aD~V~~gR~~l~ 335 (376)
T 1icp_A 259 LYMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAY--KGTFIVAGGY-DREDGNRALIEDRADLVAYGRLFIS 335 (376)
T ss_dssp HHHHHHHGGGCCSEEEEECCSCCC------CCCCSHHHHHHC--CSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred HHHHHHHHHcCCCEEEEcCCcccCCCCccccHHHHHHHHHHc--CCCEEEeCCC-CHHHHHHHHHCCCCcEEeecHHHHh
Confidence 456778889999999996532111111111234466777777 7999999999 999999999987 999999999875
No 57
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=99.20 E-value=5.1e-11 Score=135.60 Aligned_cols=207 Identities=14% Similarity=0.196 Sum_probs=133.1
Q ss_pred eeccccCCC-CC--Cccc-eeEcCeeeccceEecccccccccCChhhHHHHHHHHHcCCcEEecCCCCCCHHHHH-----
Q 018519 48 FRPRILIDV-SK--IDMN-TTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA----- 118 (354)
Q Consensus 48 l~pr~l~~~-~~--vd~s-t~l~g~~l~~Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~s~~~~~~~eei~----- 118 (354)
|.||..+.. .. .+|. |+++|+ .||+++||+..+ .+..|+.|+.++|....+...+..+.|+++
T Consensus 565 f~PrLv~~~~g~~~~~t~~t~llg~---~PIi~~gM~~~~-----~~~~lvaAvsnAGglg~l~~~~~~~~e~l~~~I~~ 636 (2051)
T 2uv8_G 565 YHPKLIKNKSGKIFVETKFSKLIGR---PPLLVPGMTPCT-----VSPDFVAATTNAGYTIELAGGGYFSAAGMTAAIDS 636 (2051)
T ss_dssp TCCEEEECSSCCEEEECHHHHHHSS---CSEEECCCHHHH-----TCHHHHHHHHHTTCEEEEEGGGCCSHHHHHHHHHH
T ss_pred cCCccccCCCCchhHHHHHHHhhCc---cceecCCCcccc-----ccHHHHHHHHcCCcEEEEccCCCCCHHHHHHHHHH
Confidence 456655421 22 2333 446782 699999998432 145899999999999999544445555443
Q ss_pred --hhC--CCceEEEEeecCChH---HHHHHHHHHHHcCCCE--EEEecCCCCCCchhHHhhhccCCCCcCccccccCCcc
Q 018519 119 --STG--PGIRFFQLYVYKDRN---VVAQLVRRAERAGFKA--IALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDL 189 (354)
Q Consensus 119 --~~~--~~~~~~QLy~~~d~~---~~~~~~~~a~~~G~~a--i~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~ 189 (354)
+.. +.++.+++... ++. ...++++.+.+.|+.. +.+..+.|..
T Consensus 637 ~~~~t~~~~~~gvN~~~~-~~~~~~~~~~~~~~~~~~gv~i~~v~~~ag~p~~--------------------------- 688 (2051)
T 2uv8_G 637 VVSQIEKGSTFGINLIYV-NPFMLQWGIPLIKELRSKGYPIQFLTIGAGVPSL--------------------------- 688 (2051)
T ss_dssp HHHHSCTTCCEEEEEETT-CTTHHHHHHHHHHHHHHTTCSEEEEEEESSCCCH---------------------------
T ss_pred HHHhcCCCCceEEEEeec-ChhhhhhhHHHHHHHHHcCCCcceEEecCCCCch---------------------------
Confidence 222 25677886532 332 1237788888999988 5555444320
Q ss_pred CcCcccchhhHHHHHhhhcCCccccc-c-cCCHHHHHHHHHhCCCEE---EEecC--CcCC--CCCCcChHHHHHHHHHH
Q 018519 190 GKMDEANDSGLAAYVAGQIDRSLSWK-G-VLTAEDARIAVQAGAAGI---IVSNH--GARQ--LDYVPATIMALEEVVKA 260 (354)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~w~-G-i~~~~~a~~~~~~G~d~I---~vs~~--gg~~--~~~~~~~~~~l~~i~~~ 260 (354)
....+++.....+.+..+ | +.....+..+.++|+|++ ++.|. ||+- .+...+++..+++|+++
T Consensus 689 --------~~~~~~i~~lG~~vi~~~~~~~~a~~~~~~~~~~g~d~~ii~~~~G~eaGGH~g~~d~~~~~l~l~~~v~~~ 760 (2051)
T 2uv8_G 689 --------EVASEYIETLGLKYLGLKPGSIDAISQVINIAKAHPNFPIALQWTGGRGGGHHSFEDAHTPMLQMYSKIRRH 760 (2051)
T ss_dssp --------HHHHHHHHHSCCSCEEECCCSHHHHHHHHHHHHHSTTSCEEEEECCSSCSEECCSCCSSHHHHHHHHHHTTC
T ss_pred --------hhHHHHHHHcCCEEEEecCchHHHHHHHHHHHHhCCCceeEEEEEccCcCCCCCcccccccHHHHHHHHHhc
Confidence 011223333333333323 2 234556688889999993 44453 5542 12234556678888887
Q ss_pred hcCCccEEEcCCCCCHHHHHHHH-----------HcCcCEEEEcHHHHHHH
Q 018519 261 TQGRIPVFLDGGVRRGTDVFKAL-----------ALGASGIFIGRPVVYSL 300 (354)
Q Consensus 261 ~~~~i~vi~~GGi~~g~dv~kal-----------alGAd~V~igr~~l~~~ 300 (354)
+ +||||+.|||.+|.+++.|| +||||+|++|+.|+-+.
T Consensus 761 ~--~ipviaaGGi~dg~~~~aaL~g~w~~~~g~~~lgadGv~~GTrf~~t~ 809 (2051)
T 2uv8_G 761 P--NIMLIFGSGFGSADDTYPYLTGEWSTKFDYPPMPFDGFLFGSRVMIAK 809 (2051)
T ss_dssp T--TBCCEEESSCCSHHHHTHHHHTCGGGTTTCCCCCCSCEECSGGGTTST
T ss_pred C--CceEEEeCCCCCHHHHHHHHccccccccCccCCCCceeeechHHHhCc
Confidence 7 89999999999999999999 89999999999988643
No 58
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=99.19 E-value=9.2e-10 Score=108.59 Aligned_cols=78 Identities=17% Similarity=0.184 Sum_probs=59.2
Q ss_pred HHHHHHHHH-hCCCEEEEecCCc----C-CCCCCc-ChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEE
Q 018519 220 AEDARIAVQ-AGAAGIIVSNHGA----R-QLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFI 292 (354)
Q Consensus 220 ~~~a~~~~~-~G~d~I~vs~~gg----~-~~~~~~-~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~i 292 (354)
.+.++.+.+ +|+|+|.|++.+. . +...++ ..+..+..+++.+++++|||+.|||++++++.++|+. ||+|++
T Consensus 267 ~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~~~iPVI~~GgI~t~e~Ae~~L~~-aDlVai 345 (419)
T 3l5a_A 267 NQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAGRIPLIASGGINSPESALDALQH-ADMVGM 345 (419)
T ss_dssp HHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHTTSSCEEECSSCCSHHHHHHHGGG-CSEEEE
T ss_pred HHHHHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcCCCCeEEEECCCCCHHHHHHHHHh-CCcHHH
Confidence 344667788 9999999976432 1 111122 1345677788877667999999999999999999999 999999
Q ss_pred cHHHHH
Q 018519 293 GRPVVY 298 (354)
Q Consensus 293 gr~~l~ 298 (354)
||++|.
T Consensus 346 GR~~Ia 351 (419)
T 3l5a_A 346 SSPFVT 351 (419)
T ss_dssp STHHHH
T ss_pred HHHHHH
Confidence 999874
No 59
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=99.19 E-value=3.8e-09 Score=101.84 Aligned_cols=75 Identities=19% Similarity=0.161 Sum_probs=59.6
Q ss_pred HHHHHHHhCCCEEEEecCCcC-C--CCCCc-ChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcC-cCEEEEcHHH
Q 018519 222 DARIAVQAGAAGIIVSNHGAR-Q--LDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRPV 296 (354)
Q Consensus 222 ~a~~~~~~G~d~I~vs~~gg~-~--~~~~~-~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalG-Ad~V~igr~~ 296 (354)
.++.+.++|+|+|.|++.+-. + ...++ ..++.+.++++.+ ++|||+.|||++++++.++|+.| ||+|++||++
T Consensus 244 la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~--~iPVi~~Ggi~t~e~a~~~l~~G~aD~V~iGR~~ 321 (349)
T 3hgj_A 244 FARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRV--GLRTGAVGLITTPEQAETLLQAGSADLVLLGRVL 321 (349)
T ss_dssp HHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHH--CCEEEECSSCCCHHHHHHHHHTTSCSEEEESTHH
T ss_pred HHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHc--CceEEEECCCCCHHHHHHHHHCCCceEEEecHHH
Confidence 367888999999999752211 1 11122 3467788888887 89999999999999999999999 9999999998
Q ss_pred HH
Q 018519 297 VY 298 (354)
Q Consensus 297 l~ 298 (354)
+.
T Consensus 322 la 323 (349)
T 3hgj_A 322 LR 323 (349)
T ss_dssp HH
T ss_pred Hh
Confidence 85
No 60
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.15 E-value=1.7e-09 Score=112.81 Aligned_cols=222 Identities=14% Similarity=0.081 Sum_probs=124.9
Q ss_pred ceeEcCeeeccceEecccccccccCChh-h--HHHHHHHHHcCCcEEecCCCCC--------------CHH------HHH
Q 018519 62 NTTVLGFKISMPIMIAPTAMQKMAHPEG-E--YATARAASAAGTIMTLSSWSTS--------------SVE------EVA 118 (354)
Q Consensus 62 st~l~g~~l~~Pi~iAPm~~~~l~~~~~-e--~~la~aa~~~G~~~~~s~~~~~--------------~~e------ei~ 118 (354)
..+|.+.+++++|++|||+...-..+.+ + ...-+.-++.|+.++++++.+. +.+ ++.
T Consensus 8 p~~ig~~~l~nRi~~apm~~~~~~~~~~~~~~~~~y~~ra~gg~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (671)
T 1ps9_A 8 PLDLGFTTLKNRVLMGSMHTGLEEYPDGAERLAAFYAERARHGVALIVSGGIAPDLTGVGMEGGAMLNDASQIPHHRTIT 87 (671)
T ss_dssp CEECSSCEESSSEEECCCCCSCTTSTTHHHHHHHHHHHHHHTTCSEEEEEEEBSSSTTCSBTTCCBCCSGGGHHHHHHHH
T ss_pred CeeECCEEEcCceEECCccCCcCCCCCCcHHHHHHHHHHhcCCCCEEEecccccCccccCCCCCCccCCHHHHHHHHHHH
Confidence 4678899999999999998532112211 1 2222222356788887665221 112 222
Q ss_pred h---hCCCceEEEEeecC---------------------Ch------------HHHHHHHHHHHHcCCCEEEEecCCCCC
Q 018519 119 S---TGPGIRFFQLYVYK---------------------DR------------NVVAQLVRRAERAGFKAIALTVDTPRL 162 (354)
Q Consensus 119 ~---~~~~~~~~QLy~~~---------------------d~------------~~~~~~~~~a~~~G~~ai~i~vd~p~~ 162 (354)
+ ....+.++||+... .+ +...+.+++++++||++|.||..|...
T Consensus 88 ~~vh~~g~~i~~Ql~h~Gr~~~~~~~~~ps~~~~~~~~~~p~~~t~~ei~~~i~~~~~aA~~a~~aGfd~veih~~~gyl 167 (671)
T 1ps9_A 88 EAVHQEGGKIALQILHTGRYSYQPHLVAPSALQAPINRFVPHELSHEEILQLIDNFARCAQLAREAGYDGVEVMGSEGYL 167 (671)
T ss_dssp HHHHHTTCCEEEEECCCGGGSBSTTCEESSSCCCTTCSSCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECBTSH
T ss_pred HHHHhcCCEEEEEeccCCcccCCCCCcCCCCcccccCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchH
Confidence 1 23367899997420 12 345667788889999999999986320
Q ss_pred CchhHHhhhccCCCCc-CccccccCCccCcCcccc---hhh-HHHHHhhhc-CCccc-------c--cccCCH----HHH
Q 018519 163 GRREADIKNRFTLPPF-LTLKNFQGLDLGKMDEAN---DSG-LAAYVAGQI-DRSLS-------W--KGVLTA----EDA 223 (354)
Q Consensus 163 g~r~~~~r~~~~~p~~-~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~-~~~~~-------w--~Gi~~~----~~a 223 (354)
-+.|--|.. .....+.+ .. ..+ ..+ +.++.+.+. +.++. | .| .+. +.+
T Consensus 168 -------~~qFlsp~~n~r~d~yGg----s~-~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~~g-~~~~~~~~~a 234 (671)
T 1ps9_A 168 -------INEFLTLRTNQRSDQWGG----DY-RNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDG-GTFAETVELA 234 (671)
T ss_dssp -------HHHHHCTTTCCCCSTTSS----SH-HHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCSTTC-CCHHHHHHHH
T ss_pred -------HHHhCCCccCCCcCcCCC----cH-HHHHHHHHHHHHHHHHHcCCCceEEEEECccccCCCC-CCHHHHHHHH
Confidence 001100100 00000000 00 001 111 122222221 11221 1 13 233 456
Q ss_pred HHHHHhCCCEEEEecCCcCC------CCCCcC-hHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcC-cCEEEEcHH
Q 018519 224 RIAVQAGAAGIIVSNHGARQ------LDYVPA-TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRP 295 (354)
Q Consensus 224 ~~~~~~G~d~I~vs~~gg~~------~~~~~~-~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalG-Ad~V~igr~ 295 (354)
+.+.++|+|+|.+++....+ .+..+. .++.+.++++.+ ++|||+.|||.+++++.++++.| ||+|++||+
T Consensus 235 ~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~iPvi~~Ggi~~~~~a~~~l~~g~aD~V~~gR~ 312 (671)
T 1ps9_A 235 QAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHV--SLPLVTTNRINDPQVADDILSRGDADMVSMARP 312 (671)
T ss_dssp HHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSC--SSCEEECSSCCSHHHHHHHHHTTSCSEEEESTH
T ss_pred HHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhc--CceEEEeCCCCCHHHHHHHHHcCCCCEEEeCHH
Confidence 78889999999997521111 111111 245666776666 79999999999999999999998 999999999
Q ss_pred HHH
Q 018519 296 VVY 298 (354)
Q Consensus 296 ~l~ 298 (354)
++.
T Consensus 313 ~l~ 315 (671)
T 1ps9_A 313 FLA 315 (671)
T ss_dssp HHH
T ss_pred HHh
Confidence 885
No 61
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=99.13 E-value=1.6e-09 Score=97.56 Aligned_cols=173 Identities=17% Similarity=0.169 Sum_probs=108.3
Q ss_pred hHHHHHHHHHcCCcEEecCCCCCCHHHHHhhCCCceEEEEeecCCh-H------HHHHHHHHHHHcCCCEEEEecCCCCC
Q 018519 90 EYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDR-N------VVAQLVRRAERAGFKAIALTVDTPRL 162 (354)
Q Consensus 90 e~~la~aa~~~G~~~~~s~~~~~~~eei~~~~~~~~~~QLy~~~d~-~------~~~~~~~~a~~~G~~ai~i~vd~p~~ 162 (354)
-..+++++.+.|+..+... +...++++++....|. +.+.. ++. + ...+.++.+.++|++.+.++...-.
T Consensus 25 ~~~~a~~~~~~Ga~~i~~~-~~~~i~~i~~~~~~pv-~~~~~-~~~~~~~~~i~~~~~~i~~~~~~Gad~v~l~~~~~~- 100 (223)
T 1y0e_A 25 MSKMALAAYEGGAVGIRAN-TKEDILAIKETVDLPV-IGIVK-RDYDHSDVFITATSKEVDELIESQCEVIALDATLQQ- 100 (223)
T ss_dssp HHHHHHHHHHHTCSEEEEE-SHHHHHHHHHHCCSCE-EEECB-CCCTTCCCCBSCSHHHHHHHHHHTCSEEEEECSCSC-
T ss_pred HHHHHHHHHHCCCeeeccC-CHHHHHHHHHhcCCCE-Eeeec-cCCCccccccCCcHHHHHHHHhCCCCEEEEeeeccc-
Confidence 4589999999998865321 1122344555443332 22111 110 0 1234567778899999887653210
Q ss_pred CchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCcccccccCCHHHHHHHHHhCCCEEEEecCCcC
Q 018519 163 GRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKGVLTAEDARIAVQAGAAGIIVSNHGAR 242 (354)
Q Consensus 163 g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~Gi~~~~~a~~~~~~G~d~I~vs~~gg~ 242 (354)
. |. . ...++.+.+.+.......+.++.+++++..+.++|+|.|.++++|.+
T Consensus 101 -----------~-p~-~----------------~~~~~i~~~~~~~~~~~v~~~~~t~~e~~~~~~~G~d~i~~~~~g~t 151 (223)
T 1y0e_A 101 -----------R-PK-E----------------TLDELVSYIRTHAPNVEIMADIATVEEAKNAARLGFDYIGTTLHGYT 151 (223)
T ss_dssp -----------C-SS-S----------------CHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTCSEEECTTTTSS
T ss_pred -----------C-cc-c----------------CHHHHHHHHHHhCCCceEEecCCCHHHHHHHHHcCCCEEEeCCCcCc
Confidence 0 10 0 01112222222211111223567899999999999999988777654
Q ss_pred CC--CC--CcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHH
Q 018519 243 QL--DY--VPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 297 (354)
Q Consensus 243 ~~--~~--~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l 297 (354)
.. +. ..+.++.+.++++.+ ++||+++|||++++|+.+++++|||+|++|++++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~--~ipvia~GGI~~~~~~~~~~~~Gad~v~vG~al~ 208 (223)
T 1y0e_A 152 SYTQGQLLYQNDFQFLKDVLQSV--DAKVIAEGNVITPDMYKRVMDLGVHCSVVGGAIT 208 (223)
T ss_dssp TTSTTCCTTHHHHHHHHHHHHHC--CSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred CCCCCCCCCcccHHHHHHHHhhC--CCCEEEecCCCCHHHHHHHHHcCCCEEEEChHHc
Confidence 21 22 345677888888877 7999999999999999999999999999999854
No 62
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.09 E-value=2.4e-09 Score=111.94 Aligned_cols=221 Identities=14% Similarity=0.063 Sum_probs=123.8
Q ss_pred ceeEcCeeeccceEecccccccccCChhh--HHHHHHHHHcCCcEEecCCCCC---------------CHH------HHH
Q 018519 62 NTTVLGFKISMPIMIAPTAMQKMAHPEGE--YATARAASAAGTIMTLSSWSTS---------------SVE------EVA 118 (354)
Q Consensus 62 st~l~g~~l~~Pi~iAPm~~~~l~~~~~e--~~la~aa~~~G~~~~~s~~~~~---------------~~e------ei~ 118 (354)
..+|.+.+++++|++|||+... ..+..+ ..+.+..++-|+.++++++... +.+ ++.
T Consensus 17 p~~ig~~~l~NRiv~apm~~~~-~~~~~~~~~~~~~~~a~gG~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (690)
T 3k30_A 17 PVQIGPFTTKNRFYQVPHCNGM-GYRDPSAQASMRKIKAEGGWSAVCTEQVEIHATSDIAPFIELRIWDDQDLPALKRIA 95 (690)
T ss_dssp CCEETTEECSSSEEECCCCCSC-SSSCHHHHHHHHHHHHHTTCSEEEEEEEECSGGGCCTTSCCEECSSGGGHHHHHHHH
T ss_pred CeeECCEEECCCeEeCCCcCCC-CCCChHHHHHHHHHHhccCCEEEEecceEeccccccCCCcCCccCCHHHHHHHHHHH
Confidence 4688899999999999997532 233222 2344556677888887664221 111 121
Q ss_pred h---hCCCceEEEEeecC-------------------------C---------------hHHHHHHHHHHHHcCCCEEEE
Q 018519 119 S---TGPGIRFFQLYVYK-------------------------D---------------RNVVAQLVRRAERAGFKAIAL 155 (354)
Q Consensus 119 ~---~~~~~~~~QLy~~~-------------------------d---------------~~~~~~~~~~a~~~G~~ai~i 155 (354)
+ ....+.++||+... + .+...+.+++|+++||+.|.|
T Consensus 96 ~~vh~~g~~i~~Ql~h~Gr~~~~~~~~~~~~~ps~~~~~~~~~~~~~p~~~t~~ei~~~i~~f~~aA~~a~~aGfDgVei 175 (690)
T 3k30_A 96 DAIHEGGGLAGIELAHNGMNAPNQLSRETPLGPGHLPVAPDTIAPIQARAMTKQDIDDLRRWHRNAVRRSIEAGYDIVYV 175 (690)
T ss_dssp HHHHHTTCEEEEEEECCGGGCCCTTTCCCCEESSSCBSCSSCCCSCBCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHhcCCEEEEEccCCcccccccccCCCccCCCCCcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 1 23367899998310 0 144566778889999999999
Q ss_pred ecCCCC-CCchhHHhhhccCCCCcCccccccCCccCcCcccc---hhh-HHHHHhhhcCC-c----cccc-----ccCCH
Q 018519 156 TVDTPR-LGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEAN---DSG-LAAYVAGQIDR-S----LSWK-----GVLTA 220 (354)
Q Consensus 156 ~vd~p~-~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~-~----~~w~-----Gi~~~ 220 (354)
|..++. . -+.|.-|. +.+.-... .... +++ ..+ +.++.+.+... + +.+. | .+.
T Consensus 176 h~a~gy~L-------~~qFlsp~--~N~R~D~y-GGs~-enR~r~~~ei~~avr~~~g~~~~v~~r~s~~~~~~~g-~~~ 243 (690)
T 3k30_A 176 YGAHGYSG-------VHHFLSKR--YNQRTDEY-GGSL-ENRMRLLRELLEDTLDECAGRAAVACRITVEEEIDGG-ITR 243 (690)
T ss_dssp EECTTCSH-------HHHHHCTT--TCCCCSTT-SSSH-HHHTHHHHHHHHHHHHHHTTSSEEEEEEECCCCSTTS-CCH
T ss_pred cccccchH-------HHHhCCCc--cCCCcccc-CCCH-HHHHHHHHHHHHHHHHHhCCCceEEEEECccccCCCC-CCH
Confidence 987754 1 01111110 00000000 0000 001 111 12222222211 1 2111 3 334
Q ss_pred HH----HHHHHHhCCCEEEEecCCc---C--CCCCCc-ChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcC-cCE
Q 018519 221 ED----ARIAVQAGAAGIIVSNHGA---R--QLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASG 289 (354)
Q Consensus 221 ~~----a~~~~~~G~d~I~vs~~gg---~--~~~~~~-~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalG-Ad~ 289 (354)
++ ++.+.+ |+|.|.|++.+- . +....+ ..++.+.++++.+ ++|||++|||++++++.++|+.| ||+
T Consensus 244 ~~~~~~~~~l~~-~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pvi~~G~i~~~~~a~~~l~~g~~d~ 320 (690)
T 3k30_A 244 EDIEGVLRELGE-LPDLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKLT--TKPVVGVGRFTSPDAMVRQIKAGILDL 320 (690)
T ss_dssp HHHHHHHHHHTT-SSSEEEEECSCHHHHTCCTTTCCTTTTHHHHTTSGGGC--SSCEEECSCCCCHHHHHHHHHTTSCSE
T ss_pred HHHHHHHHHHHh-hcCEEEEecccccccCCCCccCCccccHHHHHHHHHHc--CCeEEEeCCCCCHHHHHHHHHCCCcce
Confidence 44 444444 899999964210 0 111111 1245566666666 89999999999999999999987 999
Q ss_pred EEEcHHHHH
Q 018519 290 IFIGRPVVY 298 (354)
Q Consensus 290 V~igr~~l~ 298 (354)
|++||+++.
T Consensus 321 v~~gR~~~~ 329 (690)
T 3k30_A 321 IGAARPSIA 329 (690)
T ss_dssp EEESHHHHH
T ss_pred EEEcHHhHh
Confidence 999998874
No 63
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.07 E-value=3.7e-09 Score=111.29 Aligned_cols=74 Identities=18% Similarity=0.084 Sum_probs=54.3
Q ss_pred HHHHHHHhCCCEEEEecCCc-----C---CCCCCcC-hHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcC-cCEEE
Q 018519 222 DARIAVQAGAAGIIVSNHGA-----R---QLDYVPA-TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIF 291 (354)
Q Consensus 222 ~a~~~~~~G~d~I~vs~~gg-----~---~~~~~~~-~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalG-Ad~V~ 291 (354)
.++.+. .|+|.|.|++.+. . +....+. .+..+.++++.+ ++|||+.|||.+++++.++|+.| ||+|+
T Consensus 243 ~~~~l~-~~~d~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pvi~~G~i~~~~~a~~~l~~g~aD~V~ 319 (729)
T 1o94_A 243 FVEMAD-SLVDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVS--KKPVLGVGRYTDPEKMIEIVTKGYADIIG 319 (729)
T ss_dssp HHHHHG-GGCSEEEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHHTTC--SSCEECCSCCCCHHHHHHHHHTTSCSBEE
T ss_pred HHHHHH-hhcCEEEEeeecccccccccCCccccCccccHHHHHHHHHHC--CCEEEEeCCCCCHHHHHHHHHCCCCCEEE
Confidence 344444 4899999965321 0 1111111 356677777776 89999999999999999999988 99999
Q ss_pred EcHHHHH
Q 018519 292 IGRPVVY 298 (354)
Q Consensus 292 igr~~l~ 298 (354)
+||++|.
T Consensus 320 ~gR~~l~ 326 (729)
T 1o94_A 320 CARPSIA 326 (729)
T ss_dssp ESHHHHH
T ss_pred eCchhhc
Confidence 9999874
No 64
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=99.07 E-value=1.4e-08 Score=97.69 Aligned_cols=75 Identities=19% Similarity=0.110 Sum_probs=58.3
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCC---CCCc-ChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcC-cCEEEEcH
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQL---DYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGR 294 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~---~~~~-~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalG-Ad~V~igr 294 (354)
.+.++.+.++ +|+|.|+. |++.. ...+ ..++.+.++++.+ ++|||++|||++++++.++|+.| ||+|++||
T Consensus 233 ~~~a~~l~~~-vd~i~vs~-g~~~~~~~~~~~~~~~~~~~~ir~~~--~iPVi~~Ggi~t~e~Ae~~l~~G~aD~V~iGR 308 (343)
T 3kru_A 233 VEYINMIKDK-VDLIDVSS-GGLLNVDINLYPGYQVKYAETIKKRC--NIKTSAVGLITTQELAEEILSNERADLVALGR 308 (343)
T ss_dssp HHHHHHHTTT-CSEEEEEC-CCSSCCCCCCCTTTTHHHHHHHHHHH--TCEEEEESSCCCHHHHHHHHHTTSCSEEEESH
T ss_pred HHHHHHhhcc-ccEEeccC-CceEeeeecccCceeehHHHHHHHhc--CcccceeeeeeHHHHHHHHHhchhhHHHHHHH
Confidence 3446677888 99999973 33211 1111 2467778888888 79999999999999999999998 99999999
Q ss_pred HHHH
Q 018519 295 PVVY 298 (354)
Q Consensus 295 ~~l~ 298 (354)
+++.
T Consensus 309 ~~la 312 (343)
T 3kru_A 309 ELLR 312 (343)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 9874
No 65
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=99.07 E-value=4.2e-09 Score=96.17 Aligned_cols=199 Identities=14% Similarity=0.166 Sum_probs=115.4
Q ss_pred ceeEcCeeeccceEecccccccccCChhhHHHHHHHHHcCCcEEecCCCCCC------HHHHHhhCCCceEEEEeec---
Q 018519 62 NTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSS------VEEVASTGPGIRFFQLYVY--- 132 (354)
Q Consensus 62 st~l~g~~l~~Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~s~~~~~~------~eei~~~~~~~~~~QLy~~--- 132 (354)
..+|.|++|...+++.-=-+.. ...+.++....|+-++.=...-.. .+.+.+.-+. .-+.+.++
T Consensus 10 ~l~i~~~~f~SRl~~Gtgky~~------~~~~~~a~~asg~e~vtva~rR~~~~~~~~~~~~~~~i~~-~~~~~lpNTag 82 (265)
T 1wv2_A 10 PFVIAGRTYGSRLLVGTGKYKD------LDETRRAIEASGAEIVTVAVRRTNIGQNPDEPNLLDVIPP-DRYTILPNTAG 82 (265)
T ss_dssp CEEETTEEESCCEEECCSCSSS------HHHHHHHHHHSCCSEEEEEGGGCCC-------------CT-TTSEEEEECTT
T ss_pred CeEECCEEeecceEEecCCCCC------HHHHHHHHHHhCCCeEEEEEEeeccccCCCcchHHhhhhh-cCCEECCcCCC
Confidence 4889999999999986422211 336777778888876642221111 2333333221 11223343
Q ss_pred -CChHHHHHHHHHHHH-c-CCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcC
Q 018519 133 -KDRNVVAQLVRRAER-A-GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQID 209 (354)
Q Consensus 133 -~d~~~~~~~~~~a~~-~-G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (354)
.+.+.-....+.+.+ + |-+.|-+.+-.-. .+.+|.. . ...+..+.+++. ..
T Consensus 83 ~~ta~eAv~~a~lare~~~~~~~iKlEv~~d~----------~~llpD~--------------~-~tv~aa~~L~~~-Gf 136 (265)
T 1wv2_A 83 CYDAVEAVRTCRLARELLDGHNLVKLEVLADQ----------KTLFPNV--------------V-ETLKAAEQLVKD-GF 136 (265)
T ss_dssp CCSHHHHHHHHHHHHTTTTSCCEEEECCBSCT----------TTCCBCH--------------H-HHHHHHHHHHTT-TC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCeEEEEeecCc----------cccCcCH--------------H-HHHHHHHHHHHC-CC
Confidence 233444445566667 5 5677766542110 0111110 0 011111222221 11
Q ss_pred CcccccccCCHHHHHHHHHhCCCEEEEecC-CcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcC
Q 018519 210 RSLSWKGVLTAEDARIAVQAGAAGIIVSNH-GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGAS 288 (354)
Q Consensus 210 ~~~~w~Gi~~~~~a~~~~~~G~d~I~vs~~-gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd 288 (354)
.++.. -..++..++++.++|+++|..-+. -|+ ..|..+++.|..+++.. ++|||++|||.+++|+.+++.+|||
T Consensus 137 ~Vlpy-~~dd~~~akrl~~~G~~aVmPlg~pIGs--G~Gi~~~~lI~~I~e~~--~vPVI~eGGI~TPsDAa~AmeLGAd 211 (265)
T 1wv2_A 137 DVMVY-TSDDPIIARQLAEIGCIAVMPLAGLIGS--GLGICNPYNLRIILEEA--KVPVLVDAGVGTASDAAIAMELGCE 211 (265)
T ss_dssp EEEEE-ECSCHHHHHHHHHSCCSEEEECSSSTTC--CCCCSCHHHHHHHHHHC--SSCBEEESCCCSHHHHHHHHHHTCS
T ss_pred EEEEE-eCCCHHHHHHHHHhCCCEEEeCCccCCC--CCCcCCHHHHHHHHhcC--CCCEEEeCCCCCHHHHHHHHHcCCC
Confidence 11111 125799999999999999977343 122 12566788999998865 8999999999999999999999999
Q ss_pred EEEEcHHHHH
Q 018519 289 GIFIGRPVVY 298 (354)
Q Consensus 289 ~V~igr~~l~ 298 (354)
+|++|+.+..
T Consensus 212 gVlVgSAI~~ 221 (265)
T 1wv2_A 212 AVLMNTAIAH 221 (265)
T ss_dssp EEEESHHHHT
T ss_pred EEEEChHHhC
Confidence 9999998763
No 66
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=99.04 E-value=1.8e-08 Score=97.68 Aligned_cols=76 Identities=21% Similarity=0.098 Sum_probs=60.4
Q ss_pred HHHHHHHHhCCCEEEEecCCcC---CCCCCc-ChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcC-cCEEEEcHH
Q 018519 221 EDARIAVQAGAAGIIVSNHGAR---QLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRP 295 (354)
Q Consensus 221 ~~a~~~~~~G~d~I~vs~~gg~---~~~~~~-~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalG-Ad~V~igr~ 295 (354)
+.++.+.++|+|+|.|++.+-. ....++ ..++.+.++++.+ ++|||+.|||++++++.++|+.| ||+|++||+
T Consensus 250 ~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~--~iPVi~~GgI~s~e~a~~~l~~G~aD~V~iGR~ 327 (363)
T 3l5l_A 250 ELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREA--KLPVTSAWGFGTPQLAEAALQANQLDLVSVGRA 327 (363)
T ss_dssp HHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH--TCCEEECSSTTSHHHHHHHHHTTSCSEEECCHH
T ss_pred HHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHc--CCcEEEeCCCCCHHHHHHHHHCCCccEEEecHH
Confidence 3477889999999999763211 111222 2467778888888 79999999999999999999998 999999999
Q ss_pred HHH
Q 018519 296 VVY 298 (354)
Q Consensus 296 ~l~ 298 (354)
++.
T Consensus 328 ~la 330 (363)
T 3l5l_A 328 HLA 330 (363)
T ss_dssp HHH
T ss_pred HHh
Confidence 885
No 67
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=99.03 E-value=1.7e-08 Score=97.65 Aligned_cols=68 Identities=15% Similarity=0.035 Sum_probs=55.6
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcC-cCEEEEcHHHHH
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVY 298 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalG-Ad~V~igr~~l~ 298 (354)
.+.++.+.++|+|.|.|++. + .++ +.+.++++.+ ++|||++||| +++++.++|+.| ||+|++||+++.
T Consensus 253 ~~la~~l~~~Gvd~i~v~~~--~---~~~---~~~~~ik~~~--~iPvi~~Ggi-t~e~a~~~l~~G~aD~V~iGR~~la 321 (361)
T 3gka_A 253 GHVARELGRRRIAFLFARES--F---GGD---AIGQQLKAAF--GGPFIVNENF-TLDSAQAALDAGQADAVAWGKLFIA 321 (361)
T ss_dssp HHHHHHHHHTTCSEEEEECC--C---STT---CCHHHHHHHH--CSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred HHHHHHHHHcCCCEEEECCC--C---CCH---HHHHHHHHHc--CCCEEEeCCC-CHHHHHHHHHcCCccEEEECHHhHh
Confidence 44577889999999999653 2 122 3456777777 7899999999 999999999988 999999999885
No 68
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=99.03 E-value=4.2e-08 Score=90.95 Aligned_cols=198 Identities=13% Similarity=0.103 Sum_probs=110.1
Q ss_pred ceeEcCeeeccceEecccccccccCChhhHHHHHHHHHcCCcEEe-cC-CC---CCCHHHHHhhCC---CceEEEEeecC
Q 018519 62 NTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL-SS-WS---TSSVEEVASTGP---GIRFFQLYVYK 133 (354)
Q Consensus 62 st~l~g~~l~~Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~-s~-~~---~~~~eei~~~~~---~~~~~QLy~~~ 133 (354)
.++|.|++|++|++++.-+. |+.+ .+.++..+.|+.++. +- .+ ..+++++.+..+ .+...+.....
T Consensus 3 ~~~i~~~~~~~~~~~~t~g~-----p~~~-~~~~~l~~~Gad~ielg~pr~~~~g~~~~~~~~~l~~~~~~~~pn~~~~~ 76 (264)
T 1xm3_A 3 MLTIGGKSFQSRLLLGTGKY-----PSFD-IQKEAVAVSESDILTFAVRRMNIFEASQPNFLEQLDLSKYTLLPNTAGAS 76 (264)
T ss_dssp CEEETTEEESCCEEEECSCS-----SCHH-HHHHHHHHHTCSEEEEETTSSTTC-------CTTCCGGGSEEEEECTTCS
T ss_pred CeEECCEEecCCCEEEecCC-----CCHH-HHHHHHHHcCCeEEEEcccccccCCCCHHHHHHHHHhcCCeEcCCccccC
Confidence 46799999999999997654 3333 345677777876542 21 11 123344433322 12222332223
Q ss_pred ChHHHHHHHHHHHHcC-CCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCc-
Q 018519 134 DRNVVAQLVRRAERAG-FKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRS- 211 (354)
Q Consensus 134 d~~~~~~~~~~a~~~G-~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 211 (354)
+.+.....++.+.++| ...+.+++ ... .|.. +. ....+.+.+++...+.
T Consensus 77 ~~~~~~~f~~~a~~agg~~~i~l~i--~~d------------~~~~-----~~----------e~~~~~~~a~~~~~~g~ 127 (264)
T 1xm3_A 77 TAEEAVRIARLAKASGLCDMIKVEV--IGC------------SRSL-----LP----------DPVETLKASEQLLEEGF 127 (264)
T ss_dssp SHHHHHHHHHHHHHTTCCSSEEECC--BCC------------TTTC-----CB----------CHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHcCCCCeEEEee--cCC------------Cccc-----cc----------chHHHHHHHHHHHCCCe
Confidence 4444445566777764 45444332 110 0100 00 0111222222221111
Q ss_pred -ccccccCCHHHHHHHHHhCCCEEEEecC-CcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCE
Q 018519 212 -LSWKGVLTAEDARIAVQAGAAGIIVSNH-GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASG 289 (354)
Q Consensus 212 -~~w~Gi~~~~~a~~~~~~G~d~I~vs~~-gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~ 289 (354)
+...-..+.+.++++.+.|+|+|...+. -|+. .+..+.+.|..+++.. ++||++.|||++++|+.+++++|||+
T Consensus 128 ~vi~~~~~~~~~a~~~~~~gad~v~~~~~~~Gt~--~~~~~~~~l~~i~~~~--~iPviv~gGI~t~eda~~~~~~GAdg 203 (264)
T 1xm3_A 128 IVLPYTSDDVVLARKLEELGVHAIMPGASPIGSG--QGILNPLNLSFIIEQA--KVPVIVDAGIGSPKDAAYAMELGADG 203 (264)
T ss_dssp CEEEEECSCHHHHHHHHHHTCSCBEECSSSTTCC--CCCSCHHHHHHHHHHC--SSCBEEESCCCSHHHHHHHHHTTCSE
T ss_pred EEEEEcCCCHHHHHHHHHhCCCEEEECCcccCCC--CCCCCHHHHHHHHhcC--CCCEEEEeCCCCHHHHHHHHHcCCCE
Confidence 1111124688999999999999944221 1211 2333467788888754 89999999999999999999999999
Q ss_pred EEEcHHHHH
Q 018519 290 IFIGRPVVY 298 (354)
Q Consensus 290 V~igr~~l~ 298 (354)
|.+|+.++.
T Consensus 204 ViVGSAi~~ 212 (264)
T 1xm3_A 204 VLLNTAVSG 212 (264)
T ss_dssp EEESHHHHT
T ss_pred EEEcHHHhC
Confidence 999998764
No 69
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=99.02 E-value=1.8e-08 Score=97.53 Aligned_cols=68 Identities=21% Similarity=0.103 Sum_probs=55.4
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcC-cCEEEEcHHHHH
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVY 298 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalG-Ad~V~igr~~l~ 298 (354)
.+.++.+.++|+|.|.|++.. .++ +.+.++++.+ ++|||++||| +++++.++|+.| ||+|++||+++.
T Consensus 245 ~~la~~l~~~Gvd~i~v~~~~-----~~~---~~~~~ik~~~--~iPvi~~Ggi-t~e~a~~~l~~g~aD~V~iGR~~la 313 (362)
T 4ab4_A 245 TYVARELGKRGIAFICSRERE-----ADD---SIGPLIKEAF--GGPYIVNERF-DKASANAALASGKADAVAFGVPFIA 313 (362)
T ss_dssp HHHHHHHHHTTCSEEEEECCC-----CTT---CCHHHHHHHH--CSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred HHHHHHHHHhCCCEEEECCCC-----CCH---HHHHHHHHHC--CCCEEEeCCC-CHHHHHHHHHcCCccEEEECHHhHh
Confidence 344778899999999996532 122 3456777777 7899999999 999999999988 999999999875
No 70
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=98.93 E-value=2.9e-09 Score=125.35 Aligned_cols=208 Identities=17% Similarity=0.197 Sum_probs=132.7
Q ss_pred eeeccccCC-CCCCccc---eeEcCeeeccceEecccccccccCChhhHHHHHHHHHcCCcEEecCCCCCCHHHH-----
Q 018519 47 LFRPRILID-VSKIDMN---TTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEV----- 117 (354)
Q Consensus 47 ~l~pr~l~~-~~~vd~s---t~l~g~~l~~Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~s~~~~~~~eei----- 117 (354)
.|.|+..+. ...+.++ ++++| ..||+++||++.. . ...|+.++.++|....++.....+.+.+
T Consensus 402 ~f~P~l~~~~~g~~~~~t~~~~~lg---~~PIi~a~M~~~~-s----~~~LaaAVs~AGglG~l~~~g~~~~~~l~~~i~ 473 (3089)
T 3zen_D 402 SYAPTVVKLPDGSVKLETKFTRLTG---RSPILLAGMTPTT-V----DAKIVAAAANAGHWAELAGGGQVTEQIFNDRIA 473 (3089)
T ss_dssp GGCCEEEECTTCCEEEECHHHHHHS---SCSEEECCCHHHH-T----SHHHHHHHHHTTCEEEECSTTCCSHHHHHHHHH
T ss_pred ccCCcccccCCCcccccchhhhhcC---CCCEEeCCCcCCc-C----CHHHHHHHHhCCCceeecCCCCCCHHHHHHHHH
Confidence 366766543 2232233 34567 6899999998643 1 3489999999999999966544455533
Q ss_pred --HhhC--CCceEEEEeecCChHH------HHHHHHHHHHcC--CCEEEEecCCCCCCchhHHhhhccCCCCcCcccccc
Q 018519 118 --ASTG--PGIRFFQLYVYKDRNV------VAQLVRRAERAG--FKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQ 185 (354)
Q Consensus 118 --~~~~--~~~~~~QLy~~~d~~~------~~~~~~~a~~~G--~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~ 185 (354)
++.. +.++.+++.. .++.. ..+.++.+.+.| ++.+.++.|.|-. .+
T Consensus 474 ~~r~~~~~~~p~~vNl~~-~~p~~~~~~~g~~~~~~~~~~~g~~vdgv~~~aG~P~~--ee------------------- 531 (3089)
T 3zen_D 474 ELETLLEPGRAIQFNTLF-LDPYLWKLQVGGKRLVQRARQSGAPIDGLVVSAGIPDL--EE------------------- 531 (3089)
T ss_dssp HHHHHSCTTCCCEEEEEC-SCHHHHHHHHHHHHHHHHHHHTTCSCCEEEEESSCCCH--HH-------------------
T ss_pred HHHHhcCCCCceeechhh-cChhhhhhccCHHHHHHHHHHcCCCceEEEEeCCCCch--hH-------------------
Confidence 2233 2345555532 34433 146788889999 6678888777621 00
Q ss_pred CCccCcCcccchhhHHHHHhhh---cCCcccccccCCHHHHHHHHHhCCC------EEEEecC--CcCCCCCCcChHHHH
Q 018519 186 GLDLGKMDEANDSGLAAYVAGQ---IDRSLSWKGVLTAEDARIAVQAGAA------GIIVSNH--GARQLDYVPATIMAL 254 (354)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~w~Gi~~~~~a~~~~~~G~d------~I~vs~~--gg~~~~~~~~~~~~l 254 (354)
..++++.. ... +.+--+.+.++++++.+.|+| +|++.|. ||+.. .......+
T Consensus 532 --------------~~~~i~~l~~~Gi~-~i~~~~~t~~~a~~~~~i~~d~~~~~y~vv~~G~eaGGH~g--~~~~~~ll 594 (3089)
T 3zen_D 532 --------------AVDIIDELNEVGIS-HVVFKPGTVEQIRSVIRIAAEVPTKPVIVHIEGGRAGGHHS--WEDLDDLL 594 (3089)
T ss_dssp --------------HHHHHTSTTHHHHC-SEEECCCSHHHHHHHHHHHTTSTTSCEEEEECCSSSSEECC--SCCHHHHH
T ss_pred --------------hHHHHHHHHHcCCE-EEEEeCCCHHHHHHHHHhhhhcCCCcEEEEEeCCCcCCCCC--cccHHHHH
Confidence 00111111 111 122113588999999999999 8888774 44432 23445556
Q ss_pred HHHHHHhc--CCccEEEcCCCCCHHHHHHHH-----------HcCcCEEEEcHHHHHHHh
Q 018519 255 EEVVKATQ--GRIPVFLDGGVRRGTDVFKAL-----------ALGASGIFIGRPVVYSLA 301 (354)
Q Consensus 255 ~~i~~~~~--~~i~vi~~GGi~~g~dv~kal-----------alGAd~V~igr~~l~~~~ 301 (354)
.+....++ .++|||+.|||.+++++..+| ++|||+|++|+.|+....
T Consensus 595 ~~~~~~ir~~~~iPViaaGGI~d~~~vaaal~g~ws~~~~~p~lGAdGV~vGTrfl~t~E 654 (3089)
T 3zen_D 595 LATYSELRSRSNITICVGGGIGTPERSAEYLSGRWAEVHGYPLMPIDGILVGTAAMATLE 654 (3089)
T ss_dssp HHHHHHHTTCTTEEEEEESSCCCTTTTHHHHHTGGGGTTTCCCCCCSEEECSSTTTTCTT
T ss_pred HHHHHHHhhcCCCeEEEEeCCCCHHHHHHHhccccccccCccCCCCCEEEecHHHHhCcc
Confidence 34444332 279999999999999999999 999999999999986543
No 71
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=98.91 E-value=6.8e-08 Score=87.47 Aligned_cols=172 Identities=17% Similarity=0.185 Sum_probs=103.7
Q ss_pred hHHHHHHHHHcCCcEEecCCCCCCHHHHHhhCCCceEEEEeecC--Ch----HHHHHHHHHHHHcCCCEEEEecCCCCCC
Q 018519 90 EYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYK--DR----NVVAQLVRRAERAGFKAIALTVDTPRLG 163 (354)
Q Consensus 90 e~~la~aa~~~G~~~~~s~~~~~~~eei~~~~~~~~~~QLy~~~--d~----~~~~~~~~~a~~~G~~ai~i~vd~p~~g 163 (354)
-..+++++.+.|+..+.-. +...++.+++...-| ++-+.... +. ....+.++.+.++|++.+.++...-..
T Consensus 38 ~~~~a~~~~~~G~~~i~~~-~~~~i~~i~~~~~~p-~i~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~V~l~~~~~~~- 114 (234)
T 1yxy_A 38 MPLMAKAAQEAGAVGIRAN-SVRDIKEIQAITDLP-IIGIIKKDYPPQEPFITATMTEVDQLAALNIAVIAMDCTKRDR- 114 (234)
T ss_dssp HHHHHHHHHHHTCSEEEEE-SHHHHHHHHTTCCSC-EEEECBCCCTTSCCCBSCSHHHHHHHHTTTCSEEEEECCSSCC-
T ss_pred HHHHHHHHHHCCCcEeecC-CHHHHHHHHHhCCCC-EEeeEcCCCCccccccCChHHHHHHHHHcCCCEEEEcccccCC-
Confidence 3589999999998765321 111233444443323 22221100 00 012356778889999998877542110
Q ss_pred chhHHhhhccCCCCcCccccccCCccCcCcccchhh-HHHHHhhhcCCcccccccCCHHHHHHHHHhCCCEE--EEecC-
Q 018519 164 RREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSG-LAAYVAGQIDRSLSWKGVLTAEDARIAVQAGAAGI--IVSNH- 239 (354)
Q Consensus 164 ~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~w~Gi~~~~~a~~~~~~G~d~I--~vs~~- 239 (354)
|.+. ...+ +..+.+.. ......-++.++++++.+.++|+|.| .+.+.
T Consensus 115 ------------~~~~----------------~~~~~i~~i~~~~-~~~~v~~~~~t~~ea~~a~~~Gad~i~~~v~g~~ 165 (234)
T 1yxy_A 115 ------------HDGL----------------DIASFIRQVKEKY-PNQLLMADISTFDEGLVAHQAGIDFVGTTLSGYT 165 (234)
T ss_dssp ------------TTCC----------------CHHHHHHHHHHHC-TTCEEEEECSSHHHHHHHHHTTCSEEECTTTTSS
T ss_pred ------------CCCc----------------cHHHHHHHHHHhC-CCCeEEEeCCCHHHHHHHHHcCCCEEeeeccccC
Confidence 1000 0011 22222221 11122225678999999999999999 55432
Q ss_pred CcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHH
Q 018519 240 GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 297 (354)
Q Consensus 240 gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l 297 (354)
.+.+ ....+.++.+.++++. ++||+++|||+|.+|+.+++++|||+|++|++++
T Consensus 166 ~~~~-~~~~~~~~~i~~~~~~---~ipvia~GGI~s~~~~~~~~~~Gad~v~vGsal~ 219 (234)
T 1yxy_A 166 PYSR-QEAGPDVALIEALCKA---GIAVIAEGKIHSPEEAKKINDLGVAGIVVGGAIT 219 (234)
T ss_dssp TTSC-CSSSCCHHHHHHHHHT---TCCEEEESCCCSHHHHHHHHTTCCSEEEECHHHH
T ss_pred CCCc-CCCCCCHHHHHHHHhC---CCCEEEECCCCCHHHHHHHHHCCCCEEEEchHHh
Confidence 1222 1234567778877764 6999999999999999999999999999999865
No 72
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=98.86 E-value=2.2e-07 Score=90.47 Aligned_cols=72 Identities=6% Similarity=-0.117 Sum_probs=55.8
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcC-cCEEEEcHHHHH
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVY 298 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalG-Ad~V~igr~~l~ 298 (354)
.+.++.+.++|+|+|.+++.+-.. ...+. + +.++++.+ ++|||+.||| +++++.++|+.| ||+|++||+++.
T Consensus 269 ~~la~~l~~~Gvd~i~v~~~~~~~--~~~~~-~-~~~ir~~~--~iPvi~~G~i-t~~~a~~~l~~g~aD~V~igR~~l~ 341 (379)
T 3aty_A 269 KHLCKKIEPLSLAYLHYLRGDMVN--QQIGD-V-VAWVRGSY--SGVKISNLRY-DFEEADQQIREGKVDAVAFGAKFIA 341 (379)
T ss_dssp HHHHHHHGGGCCSEEEEECSCTTS--CCCCC-H-HHHHHTTC--CSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred HHHHHHHHHhCCCEEEEcCCCcCC--CCccH-H-HHHHHHHC--CCcEEEECCC-CHHHHHHHHHcCCCeEEEecHHHHh
Confidence 345667789999999997632111 11122 5 67777766 7999999999 999999999988 999999999986
No 73
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=98.83 E-value=3.6e-08 Score=89.26 Aligned_cols=71 Identities=24% Similarity=0.293 Sum_probs=58.6
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHH
Q 018519 221 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRP 295 (354)
Q Consensus 221 ~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~ 295 (354)
+.++.+.++|+|+|.. ++|. ..+..+++.+..+++.+++++||+++|||+|++|+.+++.+|||.|++++.
T Consensus 136 ~~a~~a~eaGad~I~t-stg~---~~gga~~~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l~aGA~~iG~s~~ 206 (225)
T 1mzh_A 136 KAVEICIEAGADFIKT-STGF---APRGTTLEEVRLIKSSAKGRIKVKASGGIRDLETAISMIEAGADRIGTSSG 206 (225)
T ss_dssp HHHHHHHHHTCSEEEC-CCSC---SSSCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEESCH
T ss_pred HHHHHHHHhCCCEEEE-CCCC---CCCCCCHHHHHHHHHHhCCCCcEEEECCCCCHHHHHHHHHhCchHHHHccH
Confidence 3477889999999944 4432 234467889999998887789999999999999999999999998888874
No 74
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=98.82 E-value=2e-08 Score=92.38 Aligned_cols=80 Identities=26% Similarity=0.461 Sum_probs=65.0
Q ss_pred ccCCHHHHHHHHHhCCCEEEEecCCcCC---------------------CC----------CCcChHHHHHHHHHHhcCC
Q 018519 216 GVLTAEDARIAVQAGAAGIIVSNHGARQ---------------------LD----------YVPATIMALEEVVKATQGR 264 (354)
Q Consensus 216 Gi~~~~~a~~~~~~G~d~I~vs~~gg~~---------------------~~----------~~~~~~~~l~~i~~~~~~~ 264 (354)
|+.+.++|.++++.|+|.|-..+..|+. +. .-.++|+.|.++++.. +
T Consensus 121 ~~~~l~EAlrri~eGA~mIrTtge~gtg~v~~av~h~r~~~~~i~~l~g~~t~~el~~~a~~~~ad~elI~~Ike~~--~ 198 (291)
T 3o07_A 121 GAKDLGEALRRINEGAAMIRTKGEAGTGDVSEAVKHIRRITEEIKACQQLKSEDDIAKVAEEMRVPVSLLKDVLEKG--K 198 (291)
T ss_dssp EESSHHHHHHHHHHTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHHHT--S
T ss_pred eCCCHHHHHHHHHCCCCEEEecCcCCCccHHHHHHHHHHHHHHHHHHHcCCCHHHhhhcccccCCCHHHHHHHHHcc--C
Confidence 7789999999999999999876543321 20 0146788999998876 7
Q ss_pred ccE--EEcCCCCCHHHHHHHHHcCcCEEEEcHHHH
Q 018519 265 IPV--FLDGGVRRGTDVFKALALGASGIFIGRPVV 297 (354)
Q Consensus 265 i~v--i~~GGi~~g~dv~kalalGAd~V~igr~~l 297 (354)
+|| |++|||.|++|+.+++.+|||+||+||.++
T Consensus 199 IPVV~IAnGGI~TpedA~~~le~GaDGVmVGrAI~ 233 (291)
T 3o07_A 199 LPVVNFAAGGVATPADAALLMQLGCDGVFVGSGIF 233 (291)
T ss_dssp CSSCEEBCSSCCSHHHHHHHHHTTCSCEEECGGGG
T ss_pred CCEEEecCCCCCCHHHHHHHHHhCCCEEEEchHHh
Confidence 888 569999999999999999999999999654
No 75
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=98.69 E-value=1.2e-07 Score=88.14 Aligned_cols=166 Identities=18% Similarity=0.154 Sum_probs=103.6
Q ss_pred HHHHHHHHHcCCcEE--ecCCCC--CCHH---HHHhhCCCceEEEEeecCChHHHHHHHHHHHHcCCCEEEEecCCCCCC
Q 018519 91 YATARAASAAGTIMT--LSSWST--SSVE---EVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLG 163 (354)
Q Consensus 91 ~~la~aa~~~G~~~~--~s~~~~--~~~e---ei~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g 163 (354)
..+|++..+.|+..+ +.+... -+++ ++++...-|... +|.-.....++.|.++|++++.+....-
T Consensus 75 ~~~A~~y~~~GA~~isvltd~~~f~Gs~~~l~~ir~~v~lPvl~-----kdfiid~~qv~~A~~~GAD~VlLi~a~l--- 146 (272)
T 3qja_A 75 AKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASVSIPVLR-----KDFVVQPYQIHEARAHGADMLLLIVAAL--- 146 (272)
T ss_dssp HHHHHHHHHTTCSEEEEECCGGGHHHHHHHHHHHHHHCSSCEEE-----ESCCCSHHHHHHHHHTTCSEEEEEGGGS---
T ss_pred HHHHHHHHHcCCCEEEEecChhhcCCCHHHHHHHHHhCCCCEEE-----CccccCHHHHHHHHHcCCCEEEEecccC---
Confidence 378999999887643 111110 1344 444443333322 2333333346778889999988743210
Q ss_pred chhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCcccccccCCHHHHHHHHHhCCCEEEEecCCcCC
Q 018519 164 RREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKGVLTAEDARIAVQAGAAGIIVSNHGARQ 243 (354)
Q Consensus 164 ~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~Gi~~~~~a~~~~~~G~d~I~vs~~gg~~ 243 (354)
+. . ....+.+....... ..|-.+.+.+++.++.++|+|.|-+.|.-
T Consensus 147 ------------~~----~-------------~l~~l~~~a~~lGl--~~lvev~t~ee~~~A~~~Gad~IGv~~r~--- 192 (272)
T 3qja_A 147 ------------EQ----S-------------VLVSMLDRTESLGM--TALVEVHTEQEADRALKAGAKVIGVNARD--- 192 (272)
T ss_dssp ------------CH----H-------------HHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHTCSEEEEESBC---
T ss_pred ------------CH----H-------------HHHHHHHHHHHCCC--cEEEEcCCHHHHHHHHHCCCCEEEECCCc---
Confidence 00 0 00111222222111 12335679999999999999999996532
Q ss_pred CCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHHH
Q 018519 244 LDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 298 (354)
Q Consensus 244 ~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l~ 298 (354)
+..-.+.++.+.++.+.++.++||++.|||.+++|+.+++.+|||+|.||+.++.
T Consensus 193 l~~~~~dl~~~~~l~~~v~~~~pvVaegGI~t~edv~~l~~~GadgvlVGsal~~ 247 (272)
T 3qja_A 193 LMTLDVDRDCFARIAPGLPSSVIRIAESGVRGTADLLAYAGAGADAVLVGEGLVT 247 (272)
T ss_dssp TTTCCBCTTHHHHHGGGSCTTSEEEEESCCCSHHHHHHHHHTTCSEEEECHHHHT
T ss_pred ccccccCHHHHHHHHHhCcccCEEEEECCCCCHHHHHHHHHcCCCEEEEcHHHhC
Confidence 2222334556667777665579999999999999999999999999999999875
No 76
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=98.69 E-value=3e-07 Score=81.43 Aligned_cols=152 Identities=13% Similarity=0.075 Sum_probs=83.9
Q ss_pred eEEEEeecCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCc--CccccccCCccCcCcccchhhHHH
Q 018519 125 RFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPF--LTLKNFQGLDLGKMDEANDSGLAA 202 (354)
Q Consensus 125 ~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~ 202 (354)
.+.-+. ..+.+...+.++.+.+.|++.+.+++.+|..-.-.+.+|..+ |.. ++..... .......
T Consensus 12 ~i~~~~-~~~~~~~~~~~~~~~~~G~~~iev~~~~~~~~~~i~~ir~~~--~~~~~ig~~~v~----------~~~~~~~ 78 (205)
T 1wa3_A 12 IVAVLR-ANSVEEAKEKALAVFEGGVHLIEITFTVPDADTVIKELSFLK--EKGAIIGAGTVT----------SVEQCRK 78 (205)
T ss_dssp EEEEEC-CSSHHHHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHTHHHH--HTTCEEEEESCC----------SHHHHHH
T ss_pred EEEEEe-cCCHHHHHHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHHC--CCCcEEEecccC----------CHHHHHH
Confidence 344343 468888888999999999999999998763211012222211 100 0000000 0001111
Q ss_pred HHhhh----cCCccc--------------ccccCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCC
Q 018519 203 YVAGQ----IDRSLS--------------WKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGR 264 (354)
Q Consensus 203 ~~~~~----~~~~~~--------------w~Gi~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~ 264 (354)
..+.- ..+.+. +-|+.+++++.++.+.|+|.|.+.. . ....++.+.++++.++ +
T Consensus 79 a~~~Gad~iv~~~~~~~~~~~~~~~g~~vi~g~~t~~e~~~a~~~Gad~vk~~~--~-----~~~g~~~~~~l~~~~~-~ 150 (205)
T 1wa3_A 79 AVESGAEFIVSPHLDEEISQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLFP--G-----EVVGPQFVKAMKGPFP-N 150 (205)
T ss_dssp HHHHTCSEEECSSCCHHHHHHHHHHTCEEECEECSHHHHHHHHHTTCCEEEETT--H-----HHHHHHHHHHHHTTCT-T
T ss_pred HHHcCCCEEEcCCCCHHHHHHHHHcCCcEECCcCCHHHHHHHHHcCCCEEEEcC--c-----cccCHHHHHHHHHhCC-C
Confidence 11100 000000 0033456666666666666665521 0 0112345555555443 7
Q ss_pred ccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHHH
Q 018519 265 IPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 298 (354)
Q Consensus 265 i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l~ 298 (354)
+||+++|||. .+++.+++.+|||+|.+|+.++.
T Consensus 151 ~pvia~GGI~-~~~~~~~~~~Ga~~v~vGs~i~~ 183 (205)
T 1wa3_A 151 VKFVPTGGVN-LDNVCEWFKAGVLAVGVGSALVK 183 (205)
T ss_dssp CEEEEBSSCC-TTTHHHHHHHTCSCEEECHHHHC
T ss_pred CcEEEcCCCC-HHHHHHHHHCCCCEEEECccccC
Confidence 9999999996 78999999999999999998764
No 77
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=98.64 E-value=3.2e-08 Score=93.09 Aligned_cols=101 Identities=20% Similarity=0.263 Sum_probs=75.9
Q ss_pred ccCCHHHHHHHHHhCCCEEEEecCCcCCC-----------------------CC-------CcChHHHHHHHHHHhcCCc
Q 018519 216 GVLTAEDARIAVQAGAAGIIVSNHGARQL-----------------------DY-------VPATIMALEEVVKATQGRI 265 (354)
Q Consensus 216 Gi~~~~~a~~~~~~G~d~I~vs~~gg~~~-----------------------~~-------~~~~~~~l~~i~~~~~~~i 265 (354)
++.+.+++.++.++|+|.|.+.|.+|+.. +. ..++++.+.++.+.+ ++
T Consensus 131 ~v~~~~Ea~~a~~~Gad~I~v~g~~gTG~~~~~v~h~~~~~~eir~l~~~~~d~L~t~~~~~~~~~~ll~~i~~~~--~i 208 (297)
T 4adt_A 131 GCTNLGEALRRISEGASMIRTKGEAGTGNIIEAIKHIRTVNNEIKYLCSLDESEVYNFAKKLRAPIDLILLTRKLK--RL 208 (297)
T ss_dssp EESSHHHHHHHHHHTCSEEEECCCTTSCCCHHHHHHHHHHHHHHHHHHHSCTTTHHHHHHHHTCCHHHHHHHHHHT--SC
T ss_pred EeCCHHHHHHHHhCCCCEEEECCCcCCCchHHHHHHHHHhhhhhhhhccccccccccccccCCCCHHHHHHHHHhc--CC
Confidence 57899999999999999999987755431 01 145678888888876 67
Q ss_pred cEE--EcCCCCCHHHHHHHHHcCcCEEEEcHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHH
Q 018519 266 PVF--LDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMA 324 (354)
Q Consensus 266 ~vi--~~GGi~~g~dv~kalalGAd~V~igr~~l~~~~~~G~~gv~~~l~~l~~el~~~m~ 324 (354)
||+ +.|||++++|+.+++.+|||+|++|+.++.+ +.....++.+.+.+..++.
T Consensus 209 PVivvA~GGI~t~~dv~~~~~~GAdgVlVGsai~~a------~dp~~~~~~l~~ai~~~~~ 263 (297)
T 4adt_A 209 PVVNFAAGGIATPADAAMCMQLGMDGVFVGSGIFES------ENPQKMASSIVMAVSNFNN 263 (297)
T ss_dssp SSEEEEESCCCSHHHHHHHHHTTCSCEEESHHHHTS------SCHHHHHHHHHHHHHTTTC
T ss_pred CeEEEecCCCCCHHHHHHHHHcCCCEEEEhHHHHcC------CCHHHHHHHHHHHHHhhCC
Confidence 776 9999999999999999999999999988742 2233445555555544433
No 78
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=98.64 E-value=1.3e-07 Score=87.62 Aligned_cols=185 Identities=19% Similarity=0.178 Sum_probs=109.9
Q ss_pred eeeccceEecccccccccCChhhHHHHHHHHHcCCcEEecCCCCCCHHHHHhhC-C-CceEEEEeecCC----h--HHHH
Q 018519 68 FKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTG-P-GIRFFQLYVYKD----R--NVVA 139 (354)
Q Consensus 68 ~~l~~Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~s~~~~~~~eei~~~~-~-~~~~~QLy~~~d----~--~~~~ 139 (354)
..+..|+.++||.... . -..+++++.+.|+..++.+.. -++.+.+.. . .+..+|+....+ . +...
T Consensus 30 ~~id~~~~l~p~~~~~--~---~~~~~~~~~~~g~~~i~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~~~ 102 (273)
T 2qjg_A 30 VPMDHGVSNGPIKGLI--D---IRKTVNDVAEGGANAVLLHKG--IVRHGHRGYGKDVGLIIHLSGGTAISPNPLKKVIV 102 (273)
T ss_dssp EECCHHHHHCSCTTSS--S---HHHHHHHHHHHTCSEEEECHH--HHHSCCCSSSCCCEEEEECEECCTTSSSTTCCEEC
T ss_pred EEcccccccCCCcchh--h---HHHHHHHHHhcCCCEEEeCHH--HHHHHHHhhcCCCCEEEEEcCCCcCCCCcccchHH
Confidence 3456788888985433 1 137899999999988764320 011111111 1 345667654221 1 1124
Q ss_pred HHHHHHHHcCCCEE--EEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCccccc--
Q 018519 140 QLVRRAERAGFKAI--ALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWK-- 215 (354)
Q Consensus 140 ~~~~~a~~~G~~ai--~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~-- 215 (354)
+.++.+.++|++.| .++..++.. ++ ++ .....+.+.......+.+.+-
T Consensus 103 ~~v~~a~~~Ga~~v~~~l~~~~~~~--~~----------------~~----------~~~~~v~~~~~~~g~~viv~~~~ 154 (273)
T 2qjg_A 103 TTVEEAIRMGADAVSIHVNVGSDED--WE----------------AY----------RDLGMIAETCEYWGMPLIAMMYP 154 (273)
T ss_dssp SCHHHHHHTTCSEEEEEEEETSTTH--HH----------------HH----------HHHHHHHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHHHcCCCEEEEEEecCCCCH--HH----------------HH----------HHHHHHHHHHHHcCCCEEEEeCC
Confidence 56778889999999 555554421 00 00 001112222222222322211
Q ss_pred -cc-----CCH---HHH-HHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCC--HHH----H
Q 018519 216 -GV-----LTA---EDA-RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR--GTD----V 279 (354)
Q Consensus 216 -Gi-----~~~---~~a-~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~--g~d----v 279 (354)
|+ .+. +++ +.+.++|+|.|.++. +..++.+.++++.+ ++||++.|||++ .+| +
T Consensus 155 ~G~~l~~~~~~~~~~~~a~~a~~~Gad~i~~~~---------~~~~~~l~~i~~~~--~ipvva~GGi~~~~~~~~~~~~ 223 (273)
T 2qjg_A 155 RGKHIQNERDPELVAHAARLGAELGADIVKTSY---------TGDIDSFRDVVKGC--PAPVVVAGGPKTNTDEEFLQMI 223 (273)
T ss_dssp CSTTCSCTTCHHHHHHHHHHHHHTTCSEEEECC---------CSSHHHHHHHHHHC--SSCEEEECCSCCSSHHHHHHHH
T ss_pred CCcccCCCCCHhHHHHHHHHHHHcCCCEEEECC---------CCCHHHHHHHHHhC--CCCEEEEeCCCCCCHHHHHHHH
Confidence 21 233 444 888999999999853 13578888888877 799999999995 777 5
Q ss_pred HHHHHcCcCEEEEcHHHHH
Q 018519 280 FKALALGASGIFIGRPVVY 298 (354)
Q Consensus 280 ~kalalGAd~V~igr~~l~ 298 (354)
.+++.+||++|.+||.++.
T Consensus 224 ~~~~~~Ga~gv~vg~~i~~ 242 (273)
T 2qjg_A 224 KDAMEAGAAGVAVGRNIFQ 242 (273)
T ss_dssp HHHHHHTCSEEECCHHHHT
T ss_pred HHHHHcCCcEEEeeHHhhC
Confidence 5556799999999998764
No 79
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=98.58 E-value=1.1e-06 Score=78.79 Aligned_cols=80 Identities=19% Similarity=0.180 Sum_probs=62.4
Q ss_pred ccCCHHHHHHHHHhCCCEEEEecCCcCC-CCC-CcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEc
Q 018519 216 GVLTAEDARIAVQAGAAGIIVSNHGARQ-LDY-VPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 293 (354)
Q Consensus 216 Gi~~~~~a~~~~~~G~d~I~vs~~gg~~-~~~-~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~ig 293 (354)
.+.++++++.+.+.|+|+|.+++-.+++ ..+ .+..++.+.++++.+ ++||+++||| +++++.+++++||++|.+|
T Consensus 116 sv~t~~~~~~a~~~gaD~i~~~~~f~~~~~~g~~~~~~~~l~~~~~~~--~~pvia~GGI-~~~nv~~~~~~Ga~gv~vg 192 (221)
T 1yad_A 116 SVHSLEEAVQAEKEDADYVLFGHVFETDCKKGLEGRGVSLLSDIKQRI--SIPVIAIGGM-TPDRLRDVKQAGADGIAVM 192 (221)
T ss_dssp EECSHHHHHHHHHTTCSEEEEECCC----------CHHHHHHHHHHHC--CSCEEEESSC-CGGGHHHHHHTTCSEEEES
T ss_pred EcCCHHHHHHHHhCCCCEEEECCccccCCCCCCCCCCHHHHHHHHHhC--CCCEEEECCC-CHHHHHHHHHcCCCEEEEh
Confidence 3568999999999999999986542222 112 244677888887766 8999999999 9999999999999999999
Q ss_pred HHHHH
Q 018519 294 RPVVY 298 (354)
Q Consensus 294 r~~l~ 298 (354)
+.++.
T Consensus 193 s~i~~ 197 (221)
T 1yad_A 193 SGIFS 197 (221)
T ss_dssp HHHHT
T ss_pred HHhhC
Confidence 98764
No 80
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=98.58 E-value=1.9e-07 Score=85.30 Aligned_cols=79 Identities=20% Similarity=0.249 Sum_probs=64.7
Q ss_pred cCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHH
Q 018519 217 VLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPV 296 (354)
Q Consensus 217 i~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~ 296 (354)
....+.++.+.+.|++.|++.+....+...+ +.++.+.++++.+ ++|||++|||++.+|+.+++.+|||+|++|+.+
T Consensus 152 ~~~~e~~~~~~~~G~~~i~~~~~~~~g~~~g-~~~~~i~~l~~~~--~ipvia~GGI~~~~d~~~~~~~Gadgv~vgsal 228 (252)
T 1ka9_F 152 LHAVEWAVKGVELGAGEILLTSMDRDGTKEG-YDLRLTRMVAEAV--GVPVIASGGAGRMEHFLEAFQAGAEAALAASVF 228 (252)
T ss_dssp EEHHHHHHHHHHHTCCEEEEEETTTTTTCSC-CCHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHHTTCSEEEESHHH
T ss_pred CcHHHHHHHHHHcCCCEEEEecccCCCCcCC-CCHHHHHHHHHHc--CCCEEEeCCCCCHHHHHHHHHCCCHHHHHHHHH
Confidence 3457889999999999999854322122223 3688999999887 899999999999999999999999999999988
Q ss_pred HH
Q 018519 297 VY 298 (354)
Q Consensus 297 l~ 298 (354)
+.
T Consensus 229 ~~ 230 (252)
T 1ka9_F 229 HF 230 (252)
T ss_dssp HT
T ss_pred Hc
Confidence 75
No 81
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=98.56 E-value=1.3e-06 Score=81.12 Aligned_cols=166 Identities=15% Similarity=0.103 Sum_probs=106.1
Q ss_pred HHHHHHHHHcCCcEE--ecCCC--CCCHHHHH---hhCCCceEEEEeecCChHHHHHHHHHHHHcCCCEEEEecCCCCCC
Q 018519 91 YATARAASAAGTIMT--LSSWS--TSSVEEVA---STGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLG 163 (354)
Q Consensus 91 ~~la~aa~~~G~~~~--~s~~~--~~~~eei~---~~~~~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g 163 (354)
..+|+...+.|+..+ +.... .-+++.+. +...-|...+=|. .|+. .+..+.++|++++.+....-
T Consensus 82 ~~~A~~y~~~GA~~IsVltd~~~f~Gs~~~L~~ir~~v~lPVl~Kdfi-~d~~----qi~ea~~~GAD~VlLi~a~L--- 153 (272)
T 3tsm_A 82 PALAKAYEEGGAACLSVLTDTPSFQGAPEFLTAARQACSLPALRKDFL-FDPY----QVYEARSWGADCILIIMASV--- 153 (272)
T ss_dssp HHHHHHHHHTTCSEEEEECCSTTTCCCHHHHHHHHHTSSSCEEEESCC-CSTH----HHHHHHHTTCSEEEEETTTS---
T ss_pred HHHHHHHHHCCCCEEEEeccccccCCCHHHHHHHHHhcCCCEEECCcc-CCHH----HHHHHHHcCCCEEEEccccc---
Confidence 479999999997543 22211 12555554 3333333322121 3443 46677899999988764311
Q ss_pred chhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCcccccccCCHHHHHHHHHhCCCEEEEecCCcCC
Q 018519 164 RREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKGVLTAEDARIAVQAGAAGIIVSNHGARQ 243 (354)
Q Consensus 164 ~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~Gi~~~~~a~~~~~~G~d~I~vs~~gg~~ 243 (354)
+ .. ....+.+......-.++. -+.+.+++.++.++|+|.|-+.|...+.
T Consensus 154 ------------~----~~-------------~l~~l~~~a~~lGl~~lv--evh~~eEl~~A~~~ga~iIGinnr~l~t 202 (272)
T 3tsm_A 154 ------------D----DD-------------LAKELEDTAFALGMDALI--EVHDEAEMERALKLSSRLLGVNNRNLRS 202 (272)
T ss_dssp ------------C----HH-------------HHHHHHHHHHHTTCEEEE--EECSHHHHHHHTTSCCSEEEEECBCTTT
T ss_pred ------------C----HH-------------HHHHHHHHHHHcCCeEEE--EeCCHHHHHHHHhcCCCEEEECCCCCcc
Confidence 0 00 011122222221111111 3579999999999999999887654332
Q ss_pred CCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHHH
Q 018519 244 LDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 298 (354)
Q Consensus 244 ~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l~ 298 (354)
-..+++...++.+.++.++|+|+.|||+|++|+.++..+|||+|.||+.++.
T Consensus 203 ---~~~dl~~~~~L~~~ip~~~~vIaesGI~t~edv~~l~~~Ga~gvLVG~almr 254 (272)
T 3tsm_A 203 ---FEVNLAVSERLAKMAPSDRLLVGESGIFTHEDCLRLEKSGIGTFLIGESLMR 254 (272)
T ss_dssp ---CCBCTHHHHHHHHHSCTTSEEEEESSCCSHHHHHHHHTTTCCEEEECHHHHT
T ss_pred ---CCCChHHHHHHHHhCCCCCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHcC
Confidence 2344666777777777689999999999999999999999999999999885
No 82
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=98.56 E-value=1.1e-06 Score=77.93 Aligned_cols=91 Identities=15% Similarity=0.207 Sum_probs=65.9
Q ss_pred HHHHHHHHHhCCCEEEEecC-CcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHHH
Q 018519 220 AEDARIAVQAGAAGIIVSNH-GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 298 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~-gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l~ 298 (354)
.+.++.+.+.|+|.|.+... +|.. .++..++.+.++++.++ ++||+++|||+ ++++.+++.+|||+|.+||+++.
T Consensus 117 ~~~~~~~~~~g~d~i~v~~g~~g~~--~~~~~~~~i~~l~~~~~-~~~i~~~gGI~-~~~~~~~~~~Gad~vvvGsai~~ 192 (211)
T 3f4w_A 117 PARVRLLEEAGADMLAVHTGTDQQA--AGRKPIDDLITMLKVRR-KARIAVAGGIS-SQTVKDYALLGPDVVIVGSAITH 192 (211)
T ss_dssp HHHHHHHHHHTCCEEEEECCHHHHH--TTCCSHHHHHHHHHHCS-SCEEEEESSCC-TTTHHHHHTTCCSEEEECHHHHT
T ss_pred HHHHHHHHHcCCCEEEEcCCCcccc--cCCCCHHHHHHHHHHcC-CCcEEEECCCC-HHHHHHHHHcCCCEEEECHHHcC
Confidence 47789999999999988531 1111 12345778888887653 69999999996 99999999999999999998764
Q ss_pred HHhhcCHHHHHHHHHHHHHHHH
Q 018519 299 SLAAEGEKGVRRVLEMLREEFE 320 (354)
Q Consensus 299 ~~~~~G~~gv~~~l~~l~~el~ 320 (354)
+ +...+.++.++++++
T Consensus 193 ~------~d~~~~~~~l~~~~~ 208 (211)
T 3f4w_A 193 A------ADPAGEARKISQVLL 208 (211)
T ss_dssp C------SSHHHHHHHHHHHHH
T ss_pred C------CCHHHHHHHHHHHHh
Confidence 2 223345555555544
No 83
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=98.52 E-value=2.6e-08 Score=93.72 Aligned_cols=115 Identities=20% Similarity=0.223 Sum_probs=84.3
Q ss_pred ccCCHHHHHHHHHhCCCEEEEecC-----------------------CcCCCC-------CCcChHHHHHHHHHHhcCCc
Q 018519 216 GVLTAEDARIAVQAGAAGIIVSNH-----------------------GARQLD-------YVPATIMALEEVVKATQGRI 265 (354)
Q Consensus 216 Gi~~~~~a~~~~~~G~d~I~vs~~-----------------------gg~~~~-------~~~~~~~~l~~i~~~~~~~i 265 (354)
++.+++++..+.++|+|.|.+.|- +|.... ..++.++.+.++++.. ++
T Consensus 131 ~v~~~~~~~~a~~~Gad~I~v~G~~~~g~~~e~~~~~~~~~~~i~~~~g~t~~~~~~~~~~~~~~~~~i~~l~~~~--~~ 208 (297)
T 2zbt_A 131 GARNLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRHARTMWKEIRYVQSLREDELMAYAKEIGAPFELVKWVHDHG--RL 208 (297)
T ss_dssp EESSHHHHHHHHHTTCSEEEECCCSSSCCTHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHS--SC
T ss_pred ecCCHHHHHHHHHcCCCEEEEcccccCcchHHHHhhHHHHHHHHHHcCCcCCCCchhhhhcchhhHHHHHHHHHhc--CC
Confidence 357899999999999999988531 011000 0234466777777765 68
Q ss_pred cEE--EcCCCCCHHHHHHHHHcCcCEEEEcHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHhCCCChhhhcccc
Q 018519 266 PVF--LDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDH 338 (354)
Q Consensus 266 ~vi--~~GGi~~g~dv~kalalGAd~V~igr~~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~i~~l~~~~ 338 (354)
||+ ++|||++++|+.+++.+|||+|++|+.++.+ ......++.+++.++..+...++.++.++.+..
T Consensus 209 pvi~~a~GGI~~~e~i~~~~~aGadgvvvGsai~~~------~dp~~~~~~l~~~i~~~~~~~~~~~~~~~~g~~ 277 (297)
T 2zbt_A 209 PVVNFAAGGIATPADAALMMHLGMDGVFVGSGIFKS------GDPRKRARAIVRAVAHYNDPEVLAEVSEDLGEP 277 (297)
T ss_dssp SSCEEBCSSCCSHHHHHHHHHTTCSEEEECGGGGGS------SCHHHHHHHHHHHHHTTTCHHHHHHHHTTCCCC
T ss_pred CcEEEeeCCCCCHHHHHHHHHcCCCEEEEchHHhCC------CCHHHHHHHHHHHHHHHhchHhhhHHHHhcCce
Confidence 888 9999999999999999999999999987631 123456777777777777666677788877655
No 84
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=98.51 E-value=2.4e-07 Score=94.55 Aligned_cols=79 Identities=18% Similarity=0.102 Sum_probs=65.6
Q ss_pred cCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHH-cCcCEEEEcHH
Q 018519 217 VLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA-LGASGIFIGRP 295 (354)
Q Consensus 217 i~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kala-lGAd~V~igr~ 295 (354)
+...+.++.+.++|++.|++.+--.-+...| +.++.+.++++++ ++|||++|||++.+|+.+++. +||++|++||.
T Consensus 452 ~~~~e~a~~~~~~Ga~~il~t~~~~dG~~~G-~d~~li~~l~~~~--~iPVIasGGi~s~~d~~~~~~~~G~~gvivg~a 528 (555)
T 1jvn_A 452 LGVWELTRACEALGAGEILLNCIDKDGSNSG-YDLELIEHVKDAV--KIPVIASSGAGVPEHFEEAFLKTRADACLGAGM 528 (555)
T ss_dssp EEHHHHHHHHHHTTCCEEEECCGGGTTTCSC-CCHHHHHHHHHHC--SSCEEECSCCCSHHHHHHHHHHSCCSEEEESHH
T ss_pred CCHHHHHHHHHHcCCCEEEEeCCCCCCCCCC-CCHHHHHHHHHhC--CccEEEECCCCCHHHHHHHHHhcCChHHHHHHH
Confidence 4568999999999999999933211122234 4899999999987 899999999999999999998 89999999998
Q ss_pred HHH
Q 018519 296 VVY 298 (354)
Q Consensus 296 ~l~ 298 (354)
++.
T Consensus 529 ~~~ 531 (555)
T 1jvn_A 529 FHR 531 (555)
T ss_dssp HHT
T ss_pred HHc
Confidence 865
No 85
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=98.50 E-value=1.6e-07 Score=85.47 Aligned_cols=84 Identities=13% Similarity=0.214 Sum_probs=66.4
Q ss_pred cccc---ccCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHc---
Q 018519 212 LSWK---GVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL--- 285 (354)
Q Consensus 212 ~~w~---Gi~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalal--- 285 (354)
-+|+ +....|.++.+.++|++.|++++....+...+ +.++.+.++++.+ ++|||++|||++++|+.+.+.+
T Consensus 136 ~g~~~~~~~~~~e~~~~~~~~G~~~i~~t~~~~~g~~~g-~~~~~i~~l~~~~--~iPvia~GGI~~~~d~~~~~~~~~~ 212 (241)
T 1qo2_A 136 KGWLAEEEIDPVSLLKRLKEYGLEEIVHTEIEKDGTLQE-HDFSLTKKIAIEA--EVKVLAAGGISSENSLKTAQKVHTE 212 (241)
T ss_dssp TTCSSCSCCCHHHHHHHHHTTTCCEEEEEETTHHHHTCC-CCHHHHHHHHHHH--TCEEEEESSCCSHHHHHHHHHHHHH
T ss_pred CCceecCCCCHHHHHHHHHhCCCCEEEEEeecccccCCc-CCHHHHHHHHHhc--CCcEEEECCCCCHHHHHHHHhcccc
Confidence 3565 22345667899999999999966432111123 3689999999888 8999999999999999999998
Q ss_pred --C-cCEEEEcHHHHH
Q 018519 286 --G-ASGIFIGRPVVY 298 (354)
Q Consensus 286 --G-Ad~V~igr~~l~ 298 (354)
| ||+|++|+.++.
T Consensus 213 ~~G~adgv~vgsal~~ 228 (241)
T 1qo2_A 213 TNGLLKGVIVGRAFLE 228 (241)
T ss_dssp TTTSEEEEEECHHHHT
T ss_pred cCCeEeEEEeeHHHHc
Confidence 9 999999999875
No 86
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=98.50 E-value=7.5e-06 Score=75.97 Aligned_cols=152 Identities=18% Similarity=0.213 Sum_probs=93.2
Q ss_pred HHHHhhCC-CceEEEEeecC-ChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcC
Q 018519 115 EEVASTGP-GIRFFQLYVYK-DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM 192 (354)
Q Consensus 115 eei~~~~~-~~~~~QLy~~~-d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~ 192 (354)
+++++..+ .|.++..|.+. ..--.++.++.+.++|++.+.+ .|.|.. +
T Consensus 89 ~~~r~~~~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIi-pDlp~e---e-------------------------- 138 (271)
T 3nav_A 89 AQIRARNPETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLI-ADVPTN---E-------------------------- 138 (271)
T ss_dssp HHHHHHCTTSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEE-TTSCGG---G--------------------------
T ss_pred HHHHhcCCCCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEE-CCCCHH---H--------------------------
Confidence 45554423 45666556421 0111366788999999999776 465531 0
Q ss_pred cccchhhHHHHHhhhcCC-cccccccCCHHHHHHHHHhCCCEEEE-ecCCcCCCCC--CcChHHHHHHHHHHhcCCccEE
Q 018519 193 DEANDSGLAAYVAGQIDR-SLSWKGVLTAEDARIAVQAGAAGIIV-SNHGARQLDY--VPATIMALEEVVKATQGRIPVF 268 (354)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~-~~~w~Gi~~~~~a~~~~~~G~d~I~v-s~~gg~~~~~--~~~~~~~l~~i~~~~~~~i~vi 268 (354)
...+.+..++.... .+...-..+.+.++...+.+.++|.. |..|-+.... .....+.+.++++.. ++||+
T Consensus 139 ----~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~~~gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr~~~--~~Pv~ 212 (271)
T 3nav_A 139 ----SQPFVAAAEKFGIQPIFIAPPTASDETLRAVAQLGKGYTYLLSRAGVTGAETKANMPVHALLERLQQFD--APPAL 212 (271)
T ss_dssp ----CHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHHCCSCEEECCCC--------CCHHHHHHHHHHHHTT--CCCEE
T ss_pred ----HHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHHCCCeEEEEeccCCCCcccCCchhHHHHHHHHHHhc--CCCEE
Confidence 01122222222111 11111224678899999999999987 4333121111 122345677777765 79999
Q ss_pred EcCCCCCHHHHHHHHHcCcCEEEEcHHHHHHHhh
Q 018519 269 LDGGVRRGTDVFKALALGASGIFIGRPVVYSLAA 302 (354)
Q Consensus 269 ~~GGi~~g~dv~kalalGAd~V~igr~~l~~~~~ 302 (354)
+.+||++++++.++++.|||+|.+|+.++..+..
T Consensus 213 vGfGIst~e~~~~~~~~gADgvIVGSAiv~~i~~ 246 (271)
T 3nav_A 213 LGFGISEPAQVKQAIEAGAAGAISGSAVVKIIET 246 (271)
T ss_dssp ECSSCCSHHHHHHHHHTTCSEEEESHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHcCCCEEEECHHHHHHHHh
Confidence 9999999999999999999999999999876643
No 87
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=98.50 E-value=1.2e-06 Score=85.80 Aligned_cols=77 Identities=17% Similarity=0.028 Sum_probs=53.0
Q ss_pred HHHHHHH---HHhC--CCEEEEecCC-cCCCCCCcC-hHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHc---C-cC
Q 018519 220 AEDARIA---VQAG--AAGIIVSNHG-ARQLDYVPA-TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL---G-AS 288 (354)
Q Consensus 220 ~~~a~~~---~~~G--~d~I~vs~~g-g~~~~~~~~-~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalal---G-Ad 288 (354)
.+.++.+ .+.| +|.|.|+... ..+.+..+. .+..+..+++.. ++|||++|||.+..|+.+++.. | ||
T Consensus 264 ~~l~~~L~~~~~~G~~l~ylhv~~~~~~~~~~~~~~~~~~~~~~ir~~~--~~PvI~~Ggi~~~~dA~~~i~~~~~g~aD 341 (407)
T 3tjl_A 264 SYLVHELQQRADKGQGIAYISVVEPRVSGNVDVSEEDQAGDNEFVSKIW--KGVILKAGNYSYDAPEFKTLKEDIADKRT 341 (407)
T ss_dssp HHHHHHHHHHHHTTCCCSEEEEECTTEETTEECCGGGCCCCSHHHHHHC--CSEEEEESCGGGGTTTTHHHHHHHTTSSE
T ss_pred HHHHHHHHhHhhcCCceeEEEEEccccCCCCcCCccchhHHHHHHHHHh--CCCEEecCCCCCHHHHHHHHHhhccCCCe
Confidence 3455677 7789 9999996321 111111111 113345566666 6899999999999988888775 5 99
Q ss_pred EEEEcHHHHH
Q 018519 289 GIFIGRPVVY 298 (354)
Q Consensus 289 ~V~igr~~l~ 298 (354)
+|++||+++.
T Consensus 342 lVa~GR~~ia 351 (407)
T 3tjl_A 342 LVGFSRYFTS 351 (407)
T ss_dssp EEECSHHHHH
T ss_pred EEEeChhhhh
Confidence 9999999885
No 88
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=98.49 E-value=4.4e-07 Score=82.87 Aligned_cols=78 Identities=15% Similarity=0.184 Sum_probs=62.5
Q ss_pred CCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHH
Q 018519 218 LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 297 (354)
Q Consensus 218 ~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l 297 (354)
...+.++.+.+.|++.|.+.+....+...+ +.++.+.++++.+ ++|||++|||++.+|+.+++.+|||+|++|+.++
T Consensus 152 ~~~e~~~~~~~~G~~~i~~~~~~~~g~~~g-~~~~~~~~l~~~~--~ipvia~GGI~~~~d~~~~~~~Gadgv~vGsal~ 228 (253)
T 1thf_D 152 LLRDWVVEVEKRGAGEILLTSIDRDGTKSG-YDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLAGADAALAASVFH 228 (253)
T ss_dssp EHHHHHHHHHHTTCSEEEEEETTTTTSCSC-CCHHHHHHHGGGC--CSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHH
T ss_pred CHHHHHHHHHHCCCCEEEEEeccCCCCCCC-CCHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCChHHHHHHHHH
Confidence 356778999999999999854221111123 3688888888766 8999999999999999999999999999999887
Q ss_pred H
Q 018519 298 Y 298 (354)
Q Consensus 298 ~ 298 (354)
.
T Consensus 229 ~ 229 (253)
T 1thf_D 229 F 229 (253)
T ss_dssp T
T ss_pred c
Confidence 5
No 89
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=98.48 E-value=3.5e-06 Score=81.30 Aligned_cols=74 Identities=18% Similarity=0.058 Sum_probs=50.2
Q ss_pred HHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcC-cCEEEEcHHHHH
Q 018519 222 DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVY 298 (354)
Q Consensus 222 ~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalG-Ad~V~igr~~l~ 298 (354)
.++.+.+.|++.+.++...-..............++++.. ..||+ .||+.+++++.++|+-| ||.|++|||+|.
T Consensus 246 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~ik~~~--~~~v~-~~g~~~~~~ae~~l~~G~aD~V~~gR~~la 320 (358)
T 4a3u_A 246 AAKMLSDLDIAFLGMREGAVDGTFGKTDQPKLSPEIRKVF--KPPLV-LNQDYTFETAQAALDSGVADAISFGRPFIG 320 (358)
T ss_dssp HHHHHHHHTCSEEEEECCBTTCSSSBCSSCCCHHHHHHHC--CSCEE-EESSCCHHHHHHHHHHTSCSEEEESHHHHH
T ss_pred HHHhhhccCccccccccccccCcccccccHHHHHHHHHhc--CCcEE-EeCCCCHHHHHHHHHcCCceEeHhhHHHHh
Confidence 3567788999999986532111111111112234556655 55665 57789999999999999 999999999985
No 90
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=98.48 E-value=9.9e-06 Score=74.99 Aligned_cols=168 Identities=17% Similarity=0.171 Sum_probs=100.3
Q ss_pred HHHHhh-CCCceEEEEeecCChH---HHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccC
Q 018519 115 EEVAST-GPGIRFFQLYVYKDRN---VVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLG 190 (354)
Q Consensus 115 eei~~~-~~~~~~~QLy~~~d~~---~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~ 190 (354)
+++++. ..-|..+..|. ++- -.++.++.+.++|++.+.+. |.|.. +
T Consensus 87 ~~ir~~~~~~Pivlm~Y~--npv~~~g~e~f~~~~~~aGvdgvii~-Dlp~e---e------------------------ 136 (267)
T 3vnd_A 87 TKVRAQHPDMPIGLLLYA--NLVFANGIDEFYTKAQAAGVDSVLIA-DVPVE---E------------------------ 136 (267)
T ss_dssp HHHHHHCTTCCEEEEECH--HHHHHHCHHHHHHHHHHHTCCEEEET-TSCGG---G------------------------
T ss_pred HHHHhcCCCCCEEEEecC--cHHHHhhHHHHHHHHHHcCCCEEEeC-CCCHh---h------------------------
Confidence 455544 23456665564 231 13667889999999998773 55530 0
Q ss_pred cCcccchhhHHHHHhhhcC-CcccccccCCHHHHHHHHHhCCCEEEE-ecCCcCCCCC--CcChHHHHHHHHHHhcCCcc
Q 018519 191 KMDEANDSGLAAYVAGQID-RSLSWKGVLTAEDARIAVQAGAAGIIV-SNHGARQLDY--VPATIMALEEVVKATQGRIP 266 (354)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~-~~~~w~Gi~~~~~a~~~~~~G~d~I~v-s~~gg~~~~~--~~~~~~~l~~i~~~~~~~i~ 266 (354)
...+.+..++... ..+...-..+.+..+...+.+-++|.+ |..|.+.... .....+.+.++++.. ++|
T Consensus 137 ------~~~~~~~~~~~gl~~i~liaP~t~~eri~~i~~~~~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~--~~p 208 (267)
T 3vnd_A 137 ------SAPFSKAAKAHGIAPIFIAPPNADADTLKMVSEQGEGYTYLLSRAGVTGTESKAGEPIENILTQLAEFN--APP 208 (267)
T ss_dssp ------CHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHHCCSCEEESCCCCCC--------CHHHHHHHHHTTT--CCC
T ss_pred ------HHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHhCCCcEEEEecCCCCCCccCCcHHHHHHHHHHHHhc--CCC
Confidence 0112222222211 111111224678888888888888887 4444332111 233456777777765 799
Q ss_pred EEEcCCCCCHHHHHHHHHcCcCEEEEcHHHHHHHhhc--CHHHHHHHHHHHHHHHH
Q 018519 267 VFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAE--GEKGVRRVLEMLREEFE 320 (354)
Q Consensus 267 vi~~GGi~~g~dv~kalalGAd~V~igr~~l~~~~~~--G~~gv~~~l~~l~~el~ 320 (354)
|++.|||++++++.+++..|||+|.+|+.++..+... ..+...+.+..+.++|+
T Consensus 209 v~vGfGI~~~e~~~~~~~~gADgvVVGSaiv~~i~~~~~~~~~~~~~~~~~~~~l~ 264 (267)
T 3vnd_A 209 PLLGFGIAEPEQVRAAIKAGAAGAISGSAVVKIIEAHQHDEATLLAKLAEFTTAMK 264 (267)
T ss_dssp EEECSSCCSHHHHHHHHHTTCSEEEECHHHHHHHHHTSSCHHHHHHHHHHHHHHHH
T ss_pred EEEECCcCCHHHHHHHHHcCCCEEEECHHHHHHHHHhccChHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988765432 12222233444445554
No 91
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=98.46 E-value=8.9e-07 Score=80.18 Aligned_cols=78 Identities=21% Similarity=0.307 Sum_probs=62.1
Q ss_pred CCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHH
Q 018519 218 LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 297 (354)
Q Consensus 218 ~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l 297 (354)
...+.++.+.+.|+|.|.+.+-....... .+.++.+.++++.+ ++||+++|||.+.+|+.+++.+|||+|++|+.++
T Consensus 155 ~~~e~~~~~~~~G~d~i~~~~~~~~g~~~-~~~~~~i~~l~~~~--~~pvia~GGi~~~~~~~~~~~~Ga~~v~vgsal~ 231 (253)
T 1h5y_A 155 DAVKWAKEVEELGAGEILLTSIDRDGTGL-GYDVELIRRVADSV--RIPVIASGGAGRVEHFYEAAAAGADAVLAASLFH 231 (253)
T ss_dssp EHHHHHHHHHHHTCSEEEEEETTTTTTCS-CCCHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHH
T ss_pred CHHHHHHHHHhCCCCEEEEecccCCCCcC-cCCHHHHHHHHHhc--CCCEEEeCCCCCHHHHHHHHHcCCcHHHHHHHHH
Confidence 34677899999999999985432111111 23678888888876 8999999999999999999999999999999886
Q ss_pred H
Q 018519 298 Y 298 (354)
Q Consensus 298 ~ 298 (354)
.
T Consensus 232 ~ 232 (253)
T 1h5y_A 232 F 232 (253)
T ss_dssp T
T ss_pred c
Confidence 4
No 92
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=98.46 E-value=3.8e-07 Score=82.85 Aligned_cols=77 Identities=19% Similarity=0.216 Sum_probs=62.3
Q ss_pred CHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHc---CcCEEEEcHH
Q 018519 219 TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL---GASGIFIGRP 295 (354)
Q Consensus 219 ~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalal---GAd~V~igr~ 295 (354)
..+.++.+.++|++.|.+.+....+...+ +.++.+.++++.+ ++|||++|||.+.+|+.+++.+ |||+|++||.
T Consensus 151 ~~e~~~~~~~~G~~~i~~~~~~~~~~~~g-~~~~~~~~l~~~~--~ipvia~GGI~~~~d~~~~~~~~~~Gad~v~vG~a 227 (244)
T 2y88_A 151 LWDVLERLDSEGCSRFVVTDITKDGTLGG-PNLDLLAGVADRT--DAPVIASGGVSSLDDLRAIATLTHRGVEGAIVGKA 227 (244)
T ss_dssp HHHHHHHHHHTTCCCEEEEETTTTTTTSC-CCHHHHHHHHTTC--SSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHH
T ss_pred HHHHHHHHHhCCCCEEEEEecCCccccCC-CCHHHHHHHHHhC--CCCEEEECCCCCHHHHHHHHhhccCCCCEEEEcHH
Confidence 47888999999999999965311111123 4788888888765 8999999999999999999998 9999999998
Q ss_pred HHH
Q 018519 296 VVY 298 (354)
Q Consensus 296 ~l~ 298 (354)
++.
T Consensus 228 l~~ 230 (244)
T 2y88_A 228 LYA 230 (244)
T ss_dssp HHT
T ss_pred HHC
Confidence 874
No 93
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=98.46 E-value=1.6e-06 Score=78.97 Aligned_cols=98 Identities=19% Similarity=0.252 Sum_probs=63.2
Q ss_pred CHHHHHHHHHhCCC-EEEE-ecCC--cCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcH
Q 018519 219 TAEDARIAVQAGAA-GIIV-SNHG--ARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 294 (354)
Q Consensus 219 ~~~~a~~~~~~G~d-~I~v-s~~g--g~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr 294 (354)
++.+.......++| .|.+ +-.| |......+..++.+.++++.+ ++||+++|||++++++.+++.+|||+|.+|+
T Consensus 144 t~~e~~~~~~~~~d~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~~~~--~~pi~~~GGI~~~e~i~~~~~~Gad~vivGs 221 (248)
T 1geq_A 144 TPDERLKVIDDMTTGFVYLVSLYGTTGAREEIPKTAYDLLRRAKRIC--RNKVAVGFGVSKREHVVSLLKEGANGVVVGS 221 (248)
T ss_dssp CCHHHHHHHHHHCSSEEEEECCC-------CCCHHHHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHHTTCSEEEECH
T ss_pred CHHHHHHHHHhcCCCeEEEEECCccCCCCCCCChhHHHHHHHHHhhc--CCCEEEEeecCCHHHHHHHHHcCCCEEEEcH
Confidence 45555555666678 5433 2212 211111233467888888876 7999999999999999999999999999999
Q ss_pred HHHHHHhhcCHHHHHHHHHHHHHHH
Q 018519 295 PVVYSLAAEGEKGVRRVLEMLREEF 319 (354)
Q Consensus 295 ~~l~~~~~~G~~gv~~~l~~l~~el 319 (354)
.++.....+. +.+.++++.+++.|
T Consensus 222 ai~~~~~~~~-~~~~~~~~~~~~~~ 245 (248)
T 1geq_A 222 ALVKIIGEKG-REATEFLKKKVEEL 245 (248)
T ss_dssp HHHHHHHHHG-GGCHHHHHHHHHHH
T ss_pred HHHhhHhhCh-HHHHHHHHHHHHHh
Confidence 9876532111 33445555555444
No 94
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=98.44 E-value=1.9e-06 Score=76.69 Aligned_cols=99 Identities=18% Similarity=0.229 Sum_probs=70.6
Q ss_pred ccCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHH
Q 018519 216 GVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRP 295 (354)
Q Consensus 216 Gi~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~ 295 (354)
|+.+++++..+.+.|+|.|.+.. + .+..++.+.++++.++.++||+++|||. .+++.+++.+||++|.+|+.
T Consensus 107 g~~t~~e~~~a~~~G~d~v~v~~--t-----~~~g~~~~~~l~~~~~~~ipvia~GGI~-~~~i~~~~~~Ga~gv~vGsa 178 (212)
T 2v82_A 107 GCATATEAFTALEAGAQALKIFP--S-----SAFGPQYIKALKAVLPSDIAVFAVGGVT-PENLAQWIDAGCAGAGLGSD 178 (212)
T ss_dssp EECSHHHHHHHHHTTCSEEEETT--H-----HHHCHHHHHHHHTTSCTTCEEEEESSCC-TTTHHHHHHHTCSEEEECTT
T ss_pred ecCCHHHHHHHHHCCCCEEEEec--C-----CCCCHHHHHHHHHhccCCCeEEEeCCCC-HHHHHHHHHcCCCEEEEChH
Confidence 57899999999999999998822 1 1223566777766553259999999997 99999999999999999997
Q ss_pred HHHHHhhcCHHHHHHHHHHHHHHHHHHHH
Q 018519 296 VVYSLAAEGEKGVRRVLEMLREEFELAMA 324 (354)
Q Consensus 296 ~l~~~~~~G~~gv~~~l~~l~~el~~~m~ 324 (354)
++.+. +..+.+.+.++.+.+.++....
T Consensus 179 i~~~~--~~~~d~~~~~~~l~~~~~~~~~ 205 (212)
T 2v82_A 179 LYRAG--QSVERTAQQAAAFVKAYREAVQ 205 (212)
T ss_dssp TCCTT--CCHHHHHHHHHHHHHHHHHHHH
T ss_pred HhCCC--CCHHHHHHHHHHHHHHHHHHHH
Confidence 65311 1123455566666555554443
No 95
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=98.43 E-value=7.6e-08 Score=90.99 Aligned_cols=112 Identities=21% Similarity=0.254 Sum_probs=77.9
Q ss_pred ccCCHHHHHHHHHhCCCEEEEecCCcC-----------------------CCCC-------CcChHHHHHHHHHHhcCCc
Q 018519 216 GVLTAEDARIAVQAGAAGIIVSNHGAR-----------------------QLDY-------VPATIMALEEVVKATQGRI 265 (354)
Q Consensus 216 Gi~~~~~a~~~~~~G~d~I~vs~~gg~-----------------------~~~~-------~~~~~~~l~~i~~~~~~~i 265 (354)
++.+.+++.++.+.|+|.|.++|..|+ ..+. .+.+++.+.++++.. ++
T Consensus 131 ~~~~~~e~~~a~~~Gad~V~~~G~~g~g~~~~~~~h~rt~~~~i~~l~gi~~~~~~~~~~~~~~~~~~i~~i~~~~--~i 208 (305)
T 2nv1_A 131 GCRDLGEATRRIAEGASMLRTKGEPGTGNIVEAVRHMRKVNAQVRKVVAMSEDELMTEAKNLGAPYELLLQIKKDG--KL 208 (305)
T ss_dssp EESSHHHHHHHHHTTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHT--SC
T ss_pred EeCCHHHHHHHHHCCCCEEEeccccCccchHHHHhhhhhhhccchhhccccchhhhcccccccccHHHHHHHHHhc--CC
Confidence 557888999999999999999643221 0000 234567788887765 78
Q ss_pred cEE--EcCCCCCHHHHHHHHHcCcCEEEEcHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHhCCCChhhhc
Q 018519 266 PVF--LDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEIT 335 (354)
Q Consensus 266 ~vi--~~GGi~~g~dv~kalalGAd~V~igr~~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~i~~l~ 335 (354)
||+ ++|||++++|+.+++.+|||+|++||.++.. +. ....++.+.+.+..++...+..++.++.
T Consensus 209 Pvi~~a~GGI~~~~d~~~~~~~GadgV~vGsai~~~----~~--p~~~~~~l~~~~~~~~~~~~~~~~~~~~ 274 (305)
T 2nv1_A 209 PVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKS----DN--PAKFAKAIVEATTHFTDYKLIAELSKEL 274 (305)
T ss_dssp SSCEEBCSCCCSHHHHHHHHHTTCSCEEECGGGGGS----SC--HHHHHHHHHHHHHTTTCHHHHHHHTSCC
T ss_pred CEEEEeccCCCCHHHHHHHHHcCCCEEEEcHHHHcC----CC--HHHHHHHHHHHHHHhcChhhHHHHHHHh
Confidence 998 9999999999999999999999999987642 11 2235555666665555444444444443
No 96
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=98.43 E-value=3.9e-07 Score=83.92 Aligned_cols=77 Identities=14% Similarity=0.169 Sum_probs=61.4
Q ss_pred CHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHHH
Q 018519 219 TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 298 (354)
Q Consensus 219 ~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l~ 298 (354)
..+.++.+.+.|++.|.+.+........+ +.++.+.++++.+ ++|||++|||++++|+.+++.+|||+|++|+.++.
T Consensus 158 ~~e~~~~~~~~G~~~i~~t~~~~~g~~~g-~~~~~i~~l~~~~--~ipvia~GGI~~~ed~~~~~~~Gadgv~vgsal~~ 234 (266)
T 2w6r_A 158 LRDWVVEVEKRGAGEILLTSIDRDGTKSG-YDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLAGADAALAASVFHF 234 (266)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTTTTTCSC-CCHHHHHHHGGGC--CSCEEEESCCCSHHHHHHHHHHTCSEEEESTTTC-
T ss_pred HHHHHHHHHHcCCCEEEEEeecCCCCcCC-CCHHHHHHHHHHc--CCCEEEeCCCCCHHHHHHHHHcCCHHHHccHHHHc
Confidence 45678999999999999954321111223 3588888888776 89999999999999999999999999999998765
No 97
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=98.41 E-value=7.4e-07 Score=81.57 Aligned_cols=77 Identities=16% Similarity=0.186 Sum_probs=62.6
Q ss_pred CCHHHHHHHHHhCCCEEEEecC-CcCCCCCCcChHHHHHHHHH-HhcCC-ccEEEcCCCCCHHHHHHHHHcCcCEEEEcH
Q 018519 218 LTAEDARIAVQAGAAGIIVSNH-GARQLDYVPATIMALEEVVK-ATQGR-IPVFLDGGVRRGTDVFKALALGASGIFIGR 294 (354)
Q Consensus 218 ~~~~~a~~~~~~G~d~I~vs~~-gg~~~~~~~~~~~~l~~i~~-~~~~~-i~vi~~GGi~~g~dv~kalalGAd~V~igr 294 (354)
.+++.++++.++|+++|.--+. -|+ ..|..+.+.|..+++ .. + +|||++|||.+++|+.+++.+|||+|++|+
T Consensus 133 ~D~~~ak~l~~~G~~aVmPlg~pIGs--G~Gi~~~~~L~~i~~~~~--~~vPVI~~GGI~tpsDAa~AmeLGAdgVlVgS 208 (268)
T 2htm_A 133 PDLVLAKRLAALGTATVMPLAAPIGS--GWGVRTRALLELFAREKA--SLPPVVVDAGLGLPSHAAEVMELGLDAVLVNT 208 (268)
T ss_dssp SCHHHHHHHHHHTCSCBEEBSSSTTT--CCCSTTHHHHHHHHHTTT--TSSCBEEESCCCSHHHHHHHHHTTCCEEEESH
T ss_pred CCHHHHHHHHhcCCCEEEecCccCcC--CcccCCHHHHHHHHHhcC--CCCeEEEeCCCCCHHHHHHHHHcCCCEEEECh
Confidence 5789999999999999965332 122 125666777888877 43 6 999999999999999999999999999999
Q ss_pred HHHH
Q 018519 295 PVVY 298 (354)
Q Consensus 295 ~~l~ 298 (354)
.+..
T Consensus 209 AI~~ 212 (268)
T 2htm_A 209 AIAE 212 (268)
T ss_dssp HHHT
T ss_pred HHhC
Confidence 8763
No 98
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=98.39 E-value=6.2e-07 Score=81.55 Aligned_cols=75 Identities=24% Similarity=0.294 Sum_probs=61.0
Q ss_pred CHHHHHHHHHhCCCEEEEecC--CcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHc---CcCEEEEc
Q 018519 219 TAEDARIAVQAGAAGIIVSNH--GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL---GASGIFIG 293 (354)
Q Consensus 219 ~~~~a~~~~~~G~d~I~vs~~--gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalal---GAd~V~ig 293 (354)
..+.++.+.+.|++.|.+.+. +++ ..+ ..++.+.++++.+ ++|||++|||++++|+.+++++ |||+|++|
T Consensus 148 ~~e~~~~~~~~G~~~i~~~~~~~~~~--~~g-~~~~~~~~i~~~~--~ipvia~GGI~~~~d~~~~~~~~~~Gadgv~vG 222 (244)
T 1vzw_A 148 LYETLDRLNKEGCARYVVTDIAKDGT--LQG-PNLELLKNVCAAT--DRPVVASGGVSSLDDLRAIAGLVPAGVEGAIVG 222 (244)
T ss_dssp HHHHHHHHHHTTCCCEEEEEC---------C-CCHHHHHHHHHTC--SSCEEEESCCCSHHHHHHHHTTGGGTEEEEEEC
T ss_pred HHHHHHHHHhCCCCEEEEeccCcccc--cCC-CCHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHhhccCCCceeeee
Confidence 466689999999999998652 221 112 4688899998876 7999999999999999999998 99999999
Q ss_pred HHHHH
Q 018519 294 RPVVY 298 (354)
Q Consensus 294 r~~l~ 298 (354)
+.++.
T Consensus 223 ~al~~ 227 (244)
T 1vzw_A 223 KALYA 227 (244)
T ss_dssp HHHHT
T ss_pred HHHHc
Confidence 98874
No 99
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=98.31 E-value=3.2e-05 Score=71.51 Aligned_cols=82 Identities=15% Similarity=0.118 Sum_probs=61.0
Q ss_pred CCHHHHHHHHHhCCCEEEEec---CCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcH
Q 018519 218 LTAEDARIAVQAGAAGIIVSN---HGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 294 (354)
Q Consensus 218 ~~~~~a~~~~~~G~d~I~vs~---~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr 294 (354)
.+.+.++...+.+.+++.+.. ..|.+....++..+.+.++++.. ++||+++|||++++++.+++..|||+|.+|+
T Consensus 158 t~~~~i~~i~~~~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~lr~~~--~~pi~vggGI~t~e~~~~~~~agAD~vVVGS 235 (268)
T 1qop_A 158 ADDDLLRQVASYGRGYTYLLSRSGVTGAENRGALPLHHLIEKLKEYH--AAPALQGFGISSPEQVSAAVRAGAAGAISGS 235 (268)
T ss_dssp CCHHHHHHHHHHCCSCEEEESSSSCCCSSSCC--CCHHHHHHHHHTT--CCCEEEESSCCSHHHHHHHHHTTCSEEEECH
T ss_pred CCHHHHHHHHhhCCCcEEEEecCCcCCCccCCCchHHHHHHHHHhcc--CCcEEEECCCCCHHHHHHHHHcCCCEEEECh
Confidence 456777777777776775532 22322222345567888888866 7999999999999999999999999999999
Q ss_pred HHHHHHh
Q 018519 295 PVVYSLA 301 (354)
Q Consensus 295 ~~l~~~~ 301 (354)
.+.....
T Consensus 236 ai~~~~~ 242 (268)
T 1qop_A 236 AIVKIIE 242 (268)
T ss_dssp HHHHHHH
T ss_pred HHhhhHh
Confidence 9887653
No 100
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=98.30 E-value=5.4e-06 Score=74.31 Aligned_cols=186 Identities=17% Similarity=0.168 Sum_probs=104.2
Q ss_pred hhHHHHHHHHHcCCcEE-ecC-----CCCCCHHHHHhhCC-CceEEEEeecCChHHHHHHHHHHHHcCCCEEEEecCCCC
Q 018519 89 GEYATARAASAAGTIMT-LSS-----WSTSSVEEVASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPR 161 (354)
Q Consensus 89 ~e~~la~aa~~~G~~~~-~s~-----~~~~~~eei~~~~~-~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~ 161 (354)
..+.+++.. +.|+..+ ++. .+...++++++..+ .+.++-++....++. .++.+.++|++.+.++.-.+.
T Consensus 20 ~~~~~~~~~-~~~vd~ie~g~~~~~~~G~~~i~~lr~~~~~~~i~ld~~l~d~p~~---~~~~~~~aGad~i~vh~~~~~ 95 (218)
T 3jr2_A 20 DAVAVASNV-ASYVDVIEVGTILAFAEGMKAVSTLRHNHPNHILVCDMKTTDGGAI---LSRMAFEAGADWITVSAAAHI 95 (218)
T ss_dssp HHHHHHHHH-GGGCSEEEECHHHHHHHTTHHHHHHHHHCTTSEEEEEEEECSCHHH---HHHHHHHHTCSEEEEETTSCH
T ss_pred HHHHHHHHh-cCCceEEEeCcHHHHhcCHHHHHHHHHhCCCCcEEEEEeecccHHH---HHHHHHhcCCCEEEEecCCCH
Confidence 345666654 3345443 321 11123456666644 345555555433332 467788999999988753220
Q ss_pred CCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCccc-ccccCCHHHHHHHHHhCCCEEEEecCC
Q 018519 162 LGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLS-WKGVLTAEDARIAVQAGAAGIIVSNHG 240 (354)
Q Consensus 162 ~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-w~Gi~~~~~a~~~~~~G~d~I~vs~~g 240 (354)
+ ......+.+++....... .-|+.++++++.+.+.|+|.+++.- +
T Consensus 96 ----~-----------------------------~~~~~~~~~~~~g~~~~~d~l~~~T~~~~~~~~~~g~d~v~~~~-~ 141 (218)
T 3jr2_A 96 ----A-----------------------------TIAACKKVADELNGEIQIEIYGNWTMQDAKAWVDLGITQAIYHR-S 141 (218)
T ss_dssp ----H-----------------------------HHHHHHHHHHHHTCEEEEECCSSCCHHHHHHHHHTTCCEEEEEC-C
T ss_pred ----H-----------------------------HHHHHHHHHHHhCCccceeeeecCCHHHHHHHHHcCccceeeee-c
Confidence 0 000111112221111111 2355678899999999999987621 1
Q ss_pred cC-CCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHHHHHhhcCHHHHHHHHHHHHHHH
Q 018519 241 AR-QLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEF 319 (354)
Q Consensus 241 g~-~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l~~~~~~G~~gv~~~l~~l~~el 319 (354)
-. +..+.....+.+..+++..+.++||+++||| +.+.+.+++.+|||+|.+||++..+ +.....+ .+++++
T Consensus 142 ~~~~~~g~~~~~~~l~~i~~~~~~~~pi~v~GGI-~~~~~~~~~~aGAd~vvvGsaI~~a------~dp~~a~-~l~~~~ 213 (218)
T 3jr2_A 142 RDAELAGIGWTTDDLDKMRQLSALGIELSITGGI-VPEDIYLFEGIKTKTFIAGRALAGA------EGQQTAA-ALREQI 213 (218)
T ss_dssp HHHHHHTCCSCHHHHHHHHHHHHTTCEEEEESSC-CGGGGGGGTTSCEEEEEESGGGSHH------HHHHHHH-HHHHHH
T ss_pred cccccCCCcCCHHHHHHHHHHhCCCCCEEEECCC-CHHHHHHHHHcCCCEEEEchhhcCC------CCHHHHH-HHHHHH
Confidence 10 0011111234455555544347999999999 5899999999999999999986542 2333444 666555
Q ss_pred H
Q 018519 320 E 320 (354)
Q Consensus 320 ~ 320 (354)
+
T Consensus 214 ~ 214 (218)
T 3jr2_A 214 D 214 (218)
T ss_dssp H
T ss_pred H
Confidence 4
No 101
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=98.29 E-value=9.7e-06 Score=74.36 Aligned_cols=79 Identities=11% Similarity=0.136 Sum_probs=64.4
Q ss_pred ccCCHHHHHHHHHh-CCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcH
Q 018519 216 GVLTAEDARIAVQA-GAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 294 (354)
Q Consensus 216 Gi~~~~~a~~~~~~-G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr 294 (354)
-+.+.+++.++.++ |+|.|-+.|.+-+ .-..+++...++.+.++.++++|+.|||.|++|+.++..+ ||+|.+|+
T Consensus 156 Ev~~~eE~~~A~~l~g~~iIGinnr~l~---t~~~d~~~~~~l~~~ip~~~~vIaEsGI~t~edv~~~~~~-a~avLVG~ 231 (251)
T 1i4n_A 156 EVHSREDLEKVFSVIRPKIIGINTRDLD---TFEIKKNVLWELLPLVPDDTVVVAESGIKDPRELKDLRGK-VNAVLVGT 231 (251)
T ss_dssp EECSHHHHHHHHTTCCCSEEEEECBCTT---TCCBCTTHHHHHGGGSCTTSEEEEESCCCCGGGHHHHTTT-CSEEEECH
T ss_pred EeCCHHHHHHHHhcCCCCEEEEeCcccc---cCCCCHHHHHHHHHhCCCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEcH
Confidence 45799999999999 9999999875422 2233455555666666667899999999999999999999 99999999
Q ss_pred HHHH
Q 018519 295 PVVY 298 (354)
Q Consensus 295 ~~l~ 298 (354)
.++.
T Consensus 232 aimr 235 (251)
T 1i4n_A 232 SIMK 235 (251)
T ss_dssp HHHH
T ss_pred HHcC
Confidence 9886
No 102
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=98.28 E-value=7e-06 Score=81.34 Aligned_cols=107 Identities=15% Similarity=0.196 Sum_probs=81.2
Q ss_pred ccCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHH
Q 018519 216 GVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRP 295 (354)
Q Consensus 216 Gi~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~ 295 (354)
-+.+.+++.++.++|+|.|-+.|.+-+ .-..+++...++.+.++.++++|+.|||+|++|+.++..+ ||+|.||+.
T Consensus 163 Evh~~eE~~~A~~lga~iIGinnr~L~---t~~~dl~~~~~L~~~ip~~~~vIaEsGI~t~edv~~~~~~-a~avLVGea 238 (452)
T 1pii_A 163 EVSNEEEQERAIALGAKVVGINNRDLR---DLSIDLNRTRELAPKLGHNVTVISESGINTYAQVRELSHF-ANGFLIGSA 238 (452)
T ss_dssp EECSHHHHHHHHHTTCSEEEEESEETT---TTEECTHHHHHHHHHHCTTSEEEEESCCCCHHHHHHHTTT-CSEEEECHH
T ss_pred EeCCHHHHHHHHHCCCCEEEEeCCCCC---CCCCCHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHHHh-CCEEEEcHH
Confidence 467999999999999999999876532 2244566677777777767899999999999999999999 999999999
Q ss_pred HHHHHhhcCHHHHHHHHHHHHHHHHHHHHHhCCCChhhhc
Q 018519 296 VVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEIT 335 (354)
Q Consensus 296 ~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~i~~l~ 335 (354)
++.. +.+...++.|.. .....||.++.++..
T Consensus 239 lmr~------~d~~~~~~~l~~---~~~KICGit~~eda~ 269 (452)
T 1pii_A 239 LMAH------DDLHAAVRRVLL---GENKVCGLTRGQDAK 269 (452)
T ss_dssp HHTC------SCHHHHHHHHHH---CSCEECCCCSHHHHH
T ss_pred HcCC------cCHHHHHHHHHH---HhccccCCCcHHHHH
Confidence 8863 223334444432 234678888877765
No 103
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=98.27 E-value=2.4e-06 Score=77.94 Aligned_cols=78 Identities=18% Similarity=0.203 Sum_probs=63.3
Q ss_pred cCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHH
Q 018519 217 VLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPV 296 (354)
Q Consensus 217 i~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~ 296 (354)
+...+.|+.+.++|+|.|.+..--+. .......++.+.++++.+ ++||+++|||++.+|+.++++.|||+|++|+++
T Consensus 35 ~~~~~~a~~~~~~G~~~i~v~d~~~~-~~~~~~~~~~i~~i~~~~--~ipvi~~Ggi~~~~~~~~~l~~Gad~V~ig~~~ 111 (247)
T 3tdn_A 35 ILLRDWVVEVEKRGAGEILLTSIDRD-GTKSGYDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLRGADKVSINTAA 111 (247)
T ss_dssp EEHHHHHHHHHHTTCSEEEEEETTTT-TCSSCCCHHHHHHHGGGC--CSCEEEESCCCSHHHHHHHHHTTCSEECCSHHH
T ss_pred CCHHHHHHHHHHcCCCEEEEEecCcc-cCCCcccHHHHHHHHHhC--CCCEEEeCCCCCHHHHHHHHHcCCCeeehhhHH
Confidence 44678899999999999998653211 112245678888888776 899999999999999999999999999999976
Q ss_pred H
Q 018519 297 V 297 (354)
Q Consensus 297 l 297 (354)
+
T Consensus 112 l 112 (247)
T 3tdn_A 112 V 112 (247)
T ss_dssp H
T ss_pred h
Confidence 6
No 104
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=98.27 E-value=5.5e-06 Score=75.24 Aligned_cols=131 Identities=21% Similarity=0.158 Sum_probs=84.6
Q ss_pred ChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcC---C
Q 018519 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQID---R 210 (354)
Q Consensus 134 d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 210 (354)
..+.-...++.|.+.|++.|++.++... ++ .+ +. ..-...+.++++.... +
T Consensus 93 ~~~~Kv~Ea~~Ai~~GAdEIDmViNig~-------lk------~g----~~---------~~v~~eI~~v~~a~~~~~lK 146 (239)
T 3ngj_A 93 PSEVKAYETKVAVEQGAEEVDMVINIGM-------VK------AK----KY---------DDVEKDVKAVVDASGKALTK 146 (239)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCHHH-------HH------TT----CH---------HHHHHHHHHHHHHHTTSEEE
T ss_pred chHHHHHHHHHHHHcCCCEEEEEeehHH-------hc------cc----cH---------HHHHHHHHHHHHHhcCCceE
Confidence 4455555667788889999999876421 00 00 00 0011124444433321 1
Q ss_pred cccccccCCHHHHHHH----HHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcC
Q 018519 211 SLSWKGVLTAEDARIA----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG 286 (354)
Q Consensus 211 ~~~w~Gi~~~~~a~~~----~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalG 286 (354)
.|.=.|-++.+...++ .++|+|+|..|..- ..+.++++.+...++.++++++|-++||||+.+|+++++.+|
T Consensus 147 VIlEt~~Lt~eei~~a~~ia~~aGADfVKTSTGf----~~ggAt~~dv~lmr~~vg~~v~VKasGGIrt~~da~~~i~aG 222 (239)
T 3ngj_A 147 VIIECCYLTNEEKVEVCKRCVAAGAEYVKTSTGF----GTHGATPEDVKLMKDTVGDKALVKAAGGIRTFDDAMKMINNG 222 (239)
T ss_dssp EECCGGGSCHHHHHHHHHHHHHHTCSEEECCCSS----SSCCCCHHHHHHHHHHHGGGSEEEEESSCCSHHHHHHHHHTT
T ss_pred EEEecCCCCHHHHHHHHHHHHHHCcCEEECCCCC----CCCCCCHHHHHHHHHhhCCCceEEEeCCCCCHHHHHHHHHhc
Confidence 2221265677766655 89999999987321 123456666666777777789999999999999999999999
Q ss_pred cCEEEEcH
Q 018519 287 ASGIFIGR 294 (354)
Q Consensus 287 Ad~V~igr 294 (354)
|+.++..+
T Consensus 223 A~riGtS~ 230 (239)
T 3ngj_A 223 ASRIGASA 230 (239)
T ss_dssp EEEEEESC
T ss_pred ccceeccc
Confidence 99877665
No 105
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=98.26 E-value=4e-06 Score=74.35 Aligned_cols=78 Identities=23% Similarity=0.281 Sum_probs=62.7
Q ss_pred cCCHHHHHHHHHhCCCEEEEecC---CcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEc
Q 018519 217 VLTAEDARIAVQAGAAGIIVSNH---GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 293 (354)
Q Consensus 217 i~~~~~a~~~~~~G~d~I~vs~~---gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~ig 293 (354)
+.+++++..+.+.|+|.|.+++- ++.+. ..+..++.+.++++.. ++||++.|||. ++++.+++.+||++|.+|
T Consensus 115 ~~t~~e~~~~~~~g~d~i~~~~~~~~~~~~~-~~~~~~~~l~~l~~~~--~~pvia~GGI~-~~nv~~~~~~Ga~gv~vg 190 (215)
T 1xi3_A 115 VYSLEEALEAEKKGADYLGAGSVFPTKTKED-ARVIGLEGLRKIVESV--KIPVVAIGGIN-KDNAREVLKTGVDGIAVI 190 (215)
T ss_dssp ESSHHHHHHHHHHTCSEEEEECSSCC----C-CCCCHHHHHHHHHHHC--SSCEEEESSCC-TTTHHHHHTTTCSEEEES
T ss_pred cCCHHHHHHHHhcCCCEEEEcCCccCCCCCC-CCCcCHHHHHHHHHhC--CCCEEEECCcC-HHHHHHHHHcCCCEEEEh
Confidence 46888899999999999998651 22221 3456788888888776 79999999999 999999999999999999
Q ss_pred HHHHH
Q 018519 294 RPVVY 298 (354)
Q Consensus 294 r~~l~ 298 (354)
+.+..
T Consensus 191 s~i~~ 195 (215)
T 1xi3_A 191 SAVMG 195 (215)
T ss_dssp HHHHT
T ss_pred HHHhC
Confidence 98764
No 106
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=98.25 E-value=7.4e-06 Score=76.19 Aligned_cols=174 Identities=16% Similarity=0.135 Sum_probs=97.3
Q ss_pred HHHHHHHHcCCcEEecCCCCCCHHHHHhhCC--CceEEEE--ee--cCChHHHHHHHHHHHHcCCCEEEEecCCCCCCch
Q 018519 92 ATARAASAAGTIMTLSSWSTSSVEEVASTGP--GIRFFQL--YV--YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRR 165 (354)
Q Consensus 92 ~la~aa~~~G~~~~~s~~~~~~~eei~~~~~--~~~~~QL--y~--~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r 165 (354)
.+.+.|.++|...++-. ..-+....+... +....-+ |+ ....+.-...++.|.+.|++.|++.++...
T Consensus 78 ~lc~eA~~~g~aaVCV~--P~~V~~a~~~L~~s~V~V~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdEIDmVINig~---- 151 (288)
T 3oa3_A 78 VLCAEAKEYGFATVCVR--PDYVSRAVQYLQGTQVGVTCVIGFHEGTYSTDQKVSEAKRAMQNGASELDMVMNYPW---- 151 (288)
T ss_dssp HHHHHHHHHTCSEEEEC--GGGHHHHHHHTTTSSCEEEEEESTTTSCSCHHHHHHHHHHHHHTTCSEEEEECCHHH----
T ss_pred HHHHHHHhcCCcEEEEC--HHHHHHHHHHcCCCCCeEEEEeCCCCCCCcHHHHHHHHHHHHHcCCCEEEEEeehhh----
Confidence 67788888887754421 112333322221 1111111 22 123344445567778889999998776421
Q ss_pred hHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCC---cccccccCCHHH----HHHHHHhCCCEEEEec
Q 018519 166 EADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDR---SLSWKGVLTAED----ARIAVQAGAAGIIVSN 238 (354)
Q Consensus 166 ~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~w~Gi~~~~~----a~~~~~~G~d~I~vs~ 238 (354)
++ .+ +. ..-...+.++++....+ .|...+.++.++ ++.+.++|+|+|.-|.
T Consensus 152 ---lk------~g----~~---------~~v~~eI~~V~~a~~~~~lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKTST 209 (288)
T 3oa3_A 152 ---LS------EK----RY---------TDVFQDIRAVRLAAKDAILKVILETSQLTADEIIAGCVLSSLAGADYVKTST 209 (288)
T ss_dssp ---HH------TT----CH---------HHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHHTTCSEEECCC
T ss_pred ---hc------CC----cH---------HHHHHHHHHHHHHhcCCCceEEEECCCCCHHHHHHHHHHHHHcCCCEEEcCC
Confidence 00 00 00 00112244444433322 233336677777 6678899999999873
Q ss_pred CCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcH
Q 018519 239 HGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 294 (354)
Q Consensus 239 ~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr 294 (354)
|-......+..+..+.++.+..+.+++|.++||||+.+|+++++.+||+.++..+
T Consensus 210 -Gf~~~GAT~edv~lmr~~v~~~g~~v~VKAAGGIrt~edAl~mi~aGA~RiGtS~ 264 (288)
T 3oa3_A 210 -GFNGPGASIENVSLMSAVCDSLQSETRVKASGGIRTIEDCVKMVRAGAERLGASA 264 (288)
T ss_dssp -SSSSCCCCHHHHHHHHHHHHHSSSCCEEEEESSCCSHHHHHHHHHTTCSEEEESC
T ss_pred -CCCCCCCCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHcCCceeehhh
Confidence 3111001123344444544433568999999999999999999999999665554
No 107
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=98.24 E-value=1.9e-05 Score=71.59 Aligned_cols=160 Identities=11% Similarity=0.068 Sum_probs=94.4
Q ss_pred EEEEeecCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCC-cCccccccCCc----------cCcCcc
Q 018519 126 FFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPP-FLTLKNFQGLD----------LGKMDE 194 (354)
Q Consensus 126 ~~QLy~~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~-~~~~~~~~~~~----------~~~~~~ 194 (354)
.+-+....+.+...+.++.+.+.|++.|.+++..|..-.-.+.++..+ |. ..+..++.... ......
T Consensus 36 vv~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~e~I~~l~~~~--~~~~iGaGTVlt~~~a~~Ai~AGA~fIvsP 113 (232)
T 4e38_A 36 VIPVIAIDNAEDIIPLGKVLAENGLPAAEITFRSDAAVEAIRLLRQAQ--PEMLIGAGTILNGEQALAAKEAGATFVVSP 113 (232)
T ss_dssp EEEEECCSSGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHC--TTCEEEEECCCSHHHHHHHHHHTCSEEECS
T ss_pred EEEEEEcCCHHHHHHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHhC--CCCEEeECCcCCHHHHHHHHHcCCCEEEeC
Confidence 333444567777777888888888888888887775322223334333 21 01111110000 000000
Q ss_pred cchhhHHHHHhhhcCCcccccccCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCC
Q 018519 195 ANDSGLAAYVAGQIDRSLSWKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVR 274 (354)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~w~Gi~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~ 274 (354)
.....+.+.......+ ..-|+.++.++.+|.++|+|.|.+.-.+ + ....+.|..++..++ ++|++..|||.
T Consensus 114 ~~~~~vi~~~~~~gi~--~ipGv~TptEi~~A~~~Gad~vK~FPa~--~----~gG~~~lkal~~p~p-~ip~~ptGGI~ 184 (232)
T 4e38_A 114 GFNPNTVRACQEIGID--IVPGVNNPSTVEAALEMGLTTLKFFPAE--A----SGGISMVKSLVGPYG-DIRLMPTGGIT 184 (232)
T ss_dssp SCCHHHHHHHHHHTCE--EECEECSHHHHHHHHHTTCCEEEECSTT--T----TTHHHHHHHHHTTCT-TCEEEEBSSCC
T ss_pred CCCHHHHHHHHHcCCC--EEcCCCCHHHHHHHHHcCCCEEEECcCc--c----ccCHHHHHHHHHHhc-CCCeeeEcCCC
Confidence 0111222222221111 1128899999999999999999984321 1 113567777766553 79999999995
Q ss_pred CHHHHHHHHHcCcCEEEEcHHHH
Q 018519 275 RGTDVFKALALGASGIFIGRPVV 297 (354)
Q Consensus 275 ~g~dv~kalalGAd~V~igr~~l 297 (354)
.+.+..++++||.++.+|+.+.
T Consensus 185 -~~n~~~~l~aGa~~~vgGs~l~ 206 (232)
T 4e38_A 185 -PSNIDNYLAIPQVLACGGTWMV 206 (232)
T ss_dssp -TTTHHHHHTSTTBCCEEECGGG
T ss_pred -HHHHHHHHHCCCeEEEECchhc
Confidence 8999999999999998888543
No 108
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=98.23 E-value=1.4e-07 Score=86.12 Aligned_cols=79 Identities=18% Similarity=0.198 Sum_probs=0.0
Q ss_pred cCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHH
Q 018519 217 VLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPV 296 (354)
Q Consensus 217 i~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~ 296 (354)
+...+.++.+.++|++.|.+++........+ +.++.+.++++.+ ++|||+.|||++.+|+.+++.+|||+|++||++
T Consensus 156 ~~~~~~a~~~~~~G~~~i~~t~~~~~g~~~g-~~~~~~~~i~~~~--~iPvia~GGI~~~~d~~~~~~~Gad~v~vg~al 232 (247)
T 3tdn_A 156 ILLRDWVVEVEKRGAGEILLTSIDRDGTKSG-YDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLRGADKVSINTAA 232 (247)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCHHHHHHHHHhcCCCEEEEecccCCCCcCC-CCHHHHHHHHHhC--CCCEEEECCCCCHHHHHHHHHcCCcHhhccHHH
Confidence 4456778889999999999855321111112 4567788888776 899999999999999999999999999999987
Q ss_pred HH
Q 018519 297 VY 298 (354)
Q Consensus 297 l~ 298 (354)
+.
T Consensus 233 ~~ 234 (247)
T 3tdn_A 233 VE 234 (247)
T ss_dssp --
T ss_pred Hc
Confidence 64
No 109
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=98.22 E-value=3.7e-05 Score=71.03 Aligned_cols=210 Identities=17% Similarity=0.199 Sum_probs=119.6
Q ss_pred cceEecccccccccCChhhHHHHHHHHHcCCcEEecCCC---------CC--------C----H---HHHHhhCC-CceE
Q 018519 72 MPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWS---------TS--------S----V---EEVASTGP-GIRF 126 (354)
Q Consensus 72 ~Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~s~~~---------~~--------~----~---eei~~~~~-~~~~ 126 (354)
.||+-+..| .+ -.|+.+.+-|+.+++--.+ +. + + +|+....+ -|.+
T Consensus 28 ~~iig~gaG-tG--------lsAk~~e~gGaDlii~ynsGrfR~~G~~slag~lpygnaN~iv~e~~~evlp~v~~iPV~ 98 (286)
T 2p10_A 28 EPIIGGGAG-TG--------LSAKSEEAGDIDLIVIYNSGRYRMAGRGSLAGLLAYGNANQIVVDMAREVLPVVRHTPVL 98 (286)
T ss_dssp CCEEEEEES-SH--------HHHHHHHHTTCSEEEECHHHHHHHTTCCGGGGGBTEEEHHHHHHHHHHHHGGGCSSSCEE
T ss_pred CceEEEecc-cc--------hhhHHHHhCCCCEEEEeccchhhhcCccchhhhccccCHHHHHHHHHHhhhccCCCCCEE
Confidence 477666543 33 4899999999988873211 10 0 0 13333332 5789
Q ss_pred EEEeecCChH-HHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHh
Q 018519 127 FQLYVYKDRN-VVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVA 205 (354)
Q Consensus 127 ~QLy~~~d~~-~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (354)
.|+.. .|+. .+...++..+++||..+ +|. |..|--.-..|+ +++.... ......+.++
T Consensus 99 Agv~~-~DP~~~~g~~Le~lk~~Gf~Gv-~N~--ptvglidG~fr~-----------~LEE~gm------~~~~eve~I~ 157 (286)
T 2p10_A 99 AGVNG-TDPFMVMSTFLRELKEIGFAGV-QNF--PTVGLIDGLFRQ-----------NLEETGM------SYAQEVEMIA 157 (286)
T ss_dssp EEECT-TCTTCCHHHHHHHHHHHTCCEE-EEC--SCGGGCCHHHHH-----------HHHHTTC------CHHHHHHHHH
T ss_pred EEECC-cCCCcCHHHHHHHHHHhCCceE-EEC--CCcccccchhhh-----------hHhhcCC------CHHHHHHHHH
Confidence 99654 5554 56677788899999998 665 432211111111 1100000 0111122222
Q ss_pred hhcCCc-ccccccCCHHHHHHHHHhCCCEEEEecCCcCC----C--CCCcCh---HHHHHHHHHH---hcCCccEEEcC-
Q 018519 206 GQIDRS-LSWKGVLTAEDARIAVQAGAAGIIVSNHGARQ----L--DYVPAT---IMALEEVVKA---TQGRIPVFLDG- 271 (354)
Q Consensus 206 ~~~~~~-~~w~Gi~~~~~a~~~~~~G~d~I~vs~~gg~~----~--~~~~~~---~~~l~~i~~~---~~~~i~vi~~G- 271 (354)
...... ++.-=+.++++|+.+.++|+|.|++ |-|.. . ....+. .+.+.++.++ ++.++-|+.-|
T Consensus 158 ~A~~~gL~Ti~~v~~~eeA~amA~agpDiI~~--h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc~gG 235 (286)
T 2p10_A 158 EAHKLDLLTTPYVFSPEDAVAMAKAGADILVC--HMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILSHGG 235 (286)
T ss_dssp HHHHTTCEECCEECSHHHHHHHHHHTCSEEEE--ECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCEEEEEST
T ss_pred HHHHCCCeEEEecCCHHHHHHHHHcCCCEEEE--CCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEEecCC
Confidence 111111 1111246999999999999999999 53310 1 112222 2344444444 34577666666
Q ss_pred CCCCHHHHHHHHHc--CcCEEEEcHHHHHHHhhcCHHHHHHHHHHHHHHHH
Q 018519 272 GVRRGTDVFKALAL--GASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFE 320 (354)
Q Consensus 272 Gi~~g~dv~kalal--GAd~V~igr~~l~~~~~~G~~gv~~~l~~l~~el~ 320 (354)
||.+++|+.+++.+ |++++..++.+... + +++.+..+.++++
T Consensus 236 pIstpeDv~~~l~~t~G~~G~~gASsier~------p-~e~ai~~~~~~fk 279 (286)
T 2p10_A 236 PIANPEDARFILDSCQGCHGFYGASSMERL------P-AEEAIRSQTLAFK 279 (286)
T ss_dssp TCCSHHHHHHHHHHCTTCCEEEESHHHHHH------H-HHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHhcCCCccEEEeehhhhcC------C-HHHHHHHHHHHHH
Confidence 99999999999999 99999999987763 2 4555555555554
No 110
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=98.21 E-value=1.1e-06 Score=81.17 Aligned_cols=79 Identities=11% Similarity=0.134 Sum_probs=61.7
Q ss_pred ccCCH-HHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcC--CccEEEcCCCCCHHHHHHHHHc--CcCEE
Q 018519 216 GVLTA-EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQG--RIPVFLDGGVRRGTDVFKALAL--GASGI 290 (354)
Q Consensus 216 Gi~~~-~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~--~i~vi~~GGi~~g~dv~kalal--GAd~V 290 (354)
++... +.++.+.++ ++.|++.+--.-+...|+ .++.+.++.++++. ++|||++|||++.+|+.+++.+ ||++|
T Consensus 156 ~~~~~~e~a~~~~~~-a~~il~t~i~~dG~~~G~-d~eli~~l~~~~~~~~~iPVIasGGi~s~ed~~~l~~~~~G~~gv 233 (260)
T 2agk_A 156 DLELNADTFRELRKY-TNEFLIHAADVEGLCGGI-DELLVSKLFEWTKDYDDLKIVYAGGAKSVDDLKLVDELSHGKVDL 233 (260)
T ss_dssp EEEESHHHHHHHTTT-CSEEEEEC-------CCC-CHHHHHHHHHHHTTCSSCEEEEESCCCCTHHHHHHHHHHTTCEEE
T ss_pred CccHHHHHHHHHHHh-cCEEEEEeeccccCcCCC-CHHHHHHHHHhhcccCCceEEEeCCCCCHHHHHHHHHhcCCCCEE
Confidence 33345 899999999 999999432111233454 89999999988732 6999999999999999999997 99999
Q ss_pred EEcHHH
Q 018519 291 FIGRPV 296 (354)
Q Consensus 291 ~igr~~ 296 (354)
++||.+
T Consensus 234 ivg~al 239 (260)
T 2agk_A 234 TFGSSL 239 (260)
T ss_dssp ECCTTB
T ss_pred EeeCCH
Confidence 999986
No 111
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=98.19 E-value=2.8e-05 Score=71.50 Aligned_cols=102 Identities=21% Similarity=0.256 Sum_probs=69.5
Q ss_pred CCHHHHHHHHHhCCCEEEEecCCc---CCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcH
Q 018519 218 LTAEDARIAVQAGAAGIIVSNHGA---RQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 294 (354)
Q Consensus 218 ~~~~~a~~~~~~G~d~I~vs~~gg---~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr 294 (354)
.+.+.++.+.+.+.+++.+....| ......+...+.+.++++.. ++||++.|||.+++++.+++.+|||+|.+|+
T Consensus 154 t~~e~~~~~~~~~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~v~~~~--~~pI~vgGGI~~~e~~~~~~~~GAdgvvVGS 231 (262)
T 1rd5_A 154 IPEDRMKEITKASEGFVYLVSVNGVTGPRANVNPRVESLIQEVKKVT--NKPVAVGFGISKPEHVKQIAQWGADGVIIGS 231 (262)
T ss_dssp SCHHHHHHHHHHCCSCEEEECSSCCBCTTSCBCTHHHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHHTTCSEEEECH
T ss_pred CCHHHHHHHHhcCCCeEEEecCCCCCCCCcCCCchHHHHHHHHHhhc--CCeEEEECCcCCHHHHHHHHHcCCCEEEECh
Confidence 456676777777777776644333 21122233456788888776 7999999999999999999999999999999
Q ss_pred HHHHHHhh-cCHHHHHHHHHHHHHHHHH
Q 018519 295 PVVYSLAA-EGEKGVRRVLEMLREEFEL 321 (354)
Q Consensus 295 ~~l~~~~~-~G~~gv~~~l~~l~~el~~ 321 (354)
.+...... .......+.+..+.++|+.
T Consensus 232 ai~~~~~~~~~~~~~~~~~~~~~~~l~~ 259 (262)
T 1rd5_A 232 AMVRQLGEAASPKQGLRRLEEYARGMKN 259 (262)
T ss_dssp HHHHHHHSSSSHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHhccChhHHHHHHHHHHHHHHH
Confidence 98876532 2222222345555555554
No 112
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=98.17 E-value=5.6e-06 Score=75.68 Aligned_cols=81 Identities=15% Similarity=0.130 Sum_probs=61.7
Q ss_pred cCCHHHHHHHHHhCCCEEEEecCCcCC-C-CCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcH
Q 018519 217 VLTAEDARIAVQAGAAGIIVSNHGARQ-L-DYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 294 (354)
Q Consensus 217 i~~~~~a~~~~~~G~d~I~vs~~gg~~-~-~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr 294 (354)
+.+++++.++.+.|+|.|.+++-..+. . +..+..++.+.++++....++||++.||| +.+++.+.+.+||++|.+++
T Consensus 142 ~ht~~Ea~~A~~~GaDyI~vgpvf~T~tK~~~~~~gl~~l~~~~~~~~~~iPvvAiGGI-~~~ni~~~~~aGa~gvav~s 220 (243)
T 3o63_A 142 THDPDQVAAAAAGDADYFCVGPCWPTPTKPGRAAPGLGLVRVAAELGGDDKPWFAIGGI-NAQRLPAVLDAGARRIVVVR 220 (243)
T ss_dssp ECSHHHHHHHHHSSCSEEEECCSSCCCC-----CCCHHHHHHHHTC---CCCEEEESSC-CTTTHHHHHHTTCCCEEESH
T ss_pred CCCHHHHHHHhhCCCCEEEEcCccCCCCCCCcchhhHHHHHHHHHhccCCCCEEEecCC-CHHHHHHHHHcCCCEEEEeH
Confidence 578999999999999999996532221 1 11244577777776542237999999999 99999999999999999999
Q ss_pred HHHH
Q 018519 295 PVVY 298 (354)
Q Consensus 295 ~~l~ 298 (354)
.++.
T Consensus 221 ai~~ 224 (243)
T 3o63_A 221 AITS 224 (243)
T ss_dssp HHHT
T ss_pred HHhC
Confidence 8764
No 113
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=98.15 E-value=3.3e-05 Score=70.54 Aligned_cols=80 Identities=13% Similarity=0.163 Sum_probs=67.2
Q ss_pred ccCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHH
Q 018519 216 GVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRP 295 (354)
Q Consensus 216 Gi~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~ 295 (354)
-|.+.++.+++.++|++.|-|.|. .+..-..+++...++...++.++.+|+.+||++++|+.+....|+|+|.||..
T Consensus 159 EVh~~~El~rAl~~~a~iIGINNR---nL~tf~vdl~~t~~L~~~ip~~~~~VsESGI~t~~dv~~l~~~G~~a~LVGea 235 (258)
T 4a29_A 159 LINDENDLDIALRIGARFIGIMSR---DFETGEINKENQRKLISMIPSNVVKVAKLGISERNEIEELRKLGVNAFLISSS 235 (258)
T ss_dssp EESSHHHHHHHHHTTCSEEEECSB---CTTTCCBCHHHHHHHHTTSCTTSEEEEEESSCCHHHHHHHHHTTCCEEEECHH
T ss_pred hcchHHHHHHHhcCCCcEEEEeCC---CccccccCHHHHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHCCCCEEEECHH
Confidence 367999999999999999988664 34444445666667777777788999999999999999999999999999999
Q ss_pred HHH
Q 018519 296 VVY 298 (354)
Q Consensus 296 ~l~ 298 (354)
++.
T Consensus 236 lmr 238 (258)
T 4a29_A 236 LMR 238 (258)
T ss_dssp HHH
T ss_pred HhC
Confidence 987
No 114
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=98.14 E-value=9.8e-06 Score=72.52 Aligned_cols=79 Identities=16% Similarity=0.196 Sum_probs=61.6
Q ss_pred CCHHHHHHHHHhCCCEEEEec--C-CcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcH
Q 018519 218 LTAEDARIAVQAGAAGIIVSN--H-GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 294 (354)
Q Consensus 218 ~~~~~a~~~~~~G~d~I~vs~--~-gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr 294 (354)
.+++++..+.+.|+|.|.++. . +..+....+..++.+.++++.++ ++||++.|||. ++++.+++.+||++|.+|+
T Consensus 124 ~t~~e~~~a~~~g~d~v~~~~v~~t~~~~~~~~~~~~~~l~~~~~~~~-~~pvia~GGI~-~~nv~~~~~~Ga~gv~vgs 201 (227)
T 2tps_A 124 HTMSEVKQAEEDGADYVGLGPIYPTETKKDTRAVQGVSLIEAVRRQGI-SIPIVGIGGIT-IDNAAPVIQAGADGVSMIS 201 (227)
T ss_dssp CSHHHHHHHHHHTCSEEEECCSSCCCSSSSCCCCCTTHHHHHHHHTTC-CCCEEEESSCC-TTTSHHHHHTTCSEEEESH
T ss_pred CCHHHHHHHHhCCCCEEEECCCcCCCCCCCCCCccCHHHHHHHHHhCC-CCCEEEEcCCC-HHHHHHHHHcCCCEEEEhH
Confidence 688889999999999999842 1 11111123446788888887662 39999999999 9999999999999999999
Q ss_pred HHHH
Q 018519 295 PVVY 298 (354)
Q Consensus 295 ~~l~ 298 (354)
.++.
T Consensus 202 ~i~~ 205 (227)
T 2tps_A 202 AISQ 205 (227)
T ss_dssp HHHT
T ss_pred Hhhc
Confidence 8764
No 115
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=98.11 E-value=0.00052 Score=63.14 Aligned_cols=81 Identities=16% Similarity=0.150 Sum_probs=56.1
Q ss_pred CCHHHHHHHHHhCCCEEEEecC-CcCCCCCC---cChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEc
Q 018519 218 LTAEDARIAVQAGAAGIIVSNH-GARQLDYV---PATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 293 (354)
Q Consensus 218 ~~~~~a~~~~~~G~d~I~vs~~-gg~~~~~~---~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~ig 293 (354)
.+.+..+...+.+..++.+... |.+....+ ....+.+.++++.. ++||++.+||++++++.+ +..|||+|.+|
T Consensus 158 t~~~rl~~ia~~a~gfiy~vs~~g~TG~~~~~~~~~~~~~v~~vr~~~--~~pv~vG~GI~t~e~~~~-~~~gADgvIVG 234 (262)
T 2ekc_A 158 STRKRIKLICEAADEMTYFVSVTGTTGAREKLPYERIKKKVEEYRELC--DKPVVVGFGVSKKEHARE-IGSFADGVVVG 234 (262)
T ss_dssp CCHHHHHHHHHHCSSCEEEESSCC---------CHHHHHHHHHHHHHC--CSCEEEESSCCSHHHHHH-HHTTSSEEEEC
T ss_pred CCHHHHHHHHHhCCCCEEEEecCCccCCCCCcCcccHHHHHHHHHhhc--CCCEEEeCCCCCHHHHHH-HHcCCCEEEEC
Confidence 4556777777777777755322 22111111 22346677777765 799999999999999998 88999999999
Q ss_pred HHHHHHHh
Q 018519 294 RPVVYSLA 301 (354)
Q Consensus 294 r~~l~~~~ 301 (354)
+.+.....
T Consensus 235 Sai~~~~~ 242 (262)
T 2ekc_A 235 SALVKLAG 242 (262)
T ss_dssp HHHHHHHH
T ss_pred HHHHhhhh
Confidence 99987653
No 116
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=98.08 E-value=2.4e-05 Score=69.72 Aligned_cols=74 Identities=18% Similarity=0.186 Sum_probs=59.6
Q ss_pred ccCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHH
Q 018519 216 GVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRP 295 (354)
Q Consensus 216 Gi~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~ 295 (354)
|+.+++++.++.+.|+|.|.+ +.. .. ....+.|..++..++ ++|+++.|||. .+++...+++||++|.+|+.
T Consensus 110 G~~t~~e~~~A~~~Gad~v~~--fpa-~~---~gG~~~lk~l~~~~~-~ipvvaiGGI~-~~n~~~~l~aGa~~vavgSa 181 (207)
T 2yw3_A 110 GVLTPTEVERALALGLSALKF--FPA-EP---FQGVRVLRAYAEVFP-EVRFLPTGGIK-EEHLPHYAALPNLLAVGGSW 181 (207)
T ss_dssp EECSHHHHHHHHHTTCCEEEE--TTT-TT---TTHHHHHHHHHHHCT-TCEEEEBSSCC-GGGHHHHHTCSSBSCEEESG
T ss_pred cCCCHHHHHHHHHCCCCEEEE--ecC-cc---ccCHHHHHHHHhhCC-CCcEEEeCCCC-HHHHHHHHhCCCcEEEEehh
Confidence 788999999999999999999 331 11 113466777776653 79999999997 79999999999999999997
Q ss_pred HH
Q 018519 296 VV 297 (354)
Q Consensus 296 ~l 297 (354)
++
T Consensus 182 i~ 183 (207)
T 2yw3_A 182 LL 183 (207)
T ss_dssp GG
T ss_pred hh
Confidence 54
No 117
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=97.95 E-value=0.00011 Score=67.67 Aligned_cols=66 Identities=33% Similarity=0.552 Sum_probs=53.8
Q ss_pred HHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCC--CHHHHHHHH----HcCcCEEEEcHHH
Q 018519 223 ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVR--RGTDVFKAL----ALGASGIFIGRPV 296 (354)
Q Consensus 223 a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~--~g~dv~kal----alGAd~V~igr~~ 296 (354)
++.+.++|+|+|.++-. .+.+.+.++++.+ +.+||+++|||+ +.+|+++.+ ..||+++.+||.+
T Consensus 165 ~~~a~~~GAD~vkt~~~---------~~~e~~~~~~~~~-~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~GvsvgraI 234 (263)
T 1w8s_A 165 ARIALELGADAMKIKYT---------GDPKTFSWAVKVA-GKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRNV 234 (263)
T ss_dssp HHHHHHHTCSEEEEECC---------SSHHHHHHHHHHT-TTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEESHHH
T ss_pred HHHHHHcCCCEEEEcCC---------CCHHHHHHHHHhC-CCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEehhh
Confidence 45778999999998621 2567788888877 345999999999 889988777 7999999999987
Q ss_pred HH
Q 018519 297 VY 298 (354)
Q Consensus 297 l~ 298 (354)
+.
T Consensus 235 ~~ 236 (263)
T 1w8s_A 235 WQ 236 (263)
T ss_dssp HT
T ss_pred cC
Confidence 64
No 118
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=97.93 E-value=0.00017 Score=64.81 Aligned_cols=167 Identities=14% Similarity=0.091 Sum_probs=94.1
Q ss_pred HHHHHHHHHcCCcEE-ecC-------CCCCCHHH---HHhhCCCceEEEEeecCChHHHHHHHHHHHHcCCCEEEEecC-
Q 018519 91 YATARAASAAGTIMT-LSS-------WSTSSVEE---VASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVD- 158 (354)
Q Consensus 91 ~~la~aa~~~G~~~~-~s~-------~~~~~~ee---i~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~i~vd- 158 (354)
...++++.+.|+.++ +.. .....++. +++..+.+..+-+|. +|++ +.++.+.++|++.+.++.+
T Consensus 26 ~~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~~~~~~~v~l~v-nd~~---~~v~~~~~~Gad~v~vh~~~ 101 (230)
T 1rpx_A 26 GEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPITDLPLDVHLMI-VEPD---QRVPDFIKAGADIVSVHCEQ 101 (230)
T ss_dssp HHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGGCCSCEEEEEES-SSHH---HHHHHHHHTTCSEEEEECST
T ss_pred HHHHHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhccCCcEEEEEEe-cCHH---HHHHHHHHcCCCEEEEEecC
Confidence 466777888886532 221 11233443 444433456677776 4533 5677788899999998865
Q ss_pred -CCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCccccccc--CCHHHHHHHHHhCCCEEE
Q 018519 159 -TPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKGV--LTAEDARIAVQAGAAGII 235 (354)
Q Consensus 159 -~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~Gi--~~~~~a~~~~~~G~d~I~ 235 (354)
.+.. - ....+.+... ...++ .-+ .+..+.......++|.|.
T Consensus 102 ~~~~~--~--------------------------------~~~~~~~~~~-g~~ig-~~~~p~t~~e~~~~~~~~~d~vl 145 (230)
T 1rpx_A 102 SSTIH--L--------------------------------HRTINQIKSL-GAKAG-VVLNPGTPLTAIEYVLDAVDLVL 145 (230)
T ss_dssp TTCSC--H--------------------------------HHHHHHHHHT-TSEEE-EEECTTCCGGGGTTTTTTCSEEE
T ss_pred ccchh--H--------------------------------HHHHHHHHHc-CCcEE-EEeCCCCCHHHHHHHHhhCCEEE
Confidence 3210 0 0011111111 01111 111 122233333456899886
Q ss_pred EecC--CcCCCCCCcChHHHHHHHHHHhc---CCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHHH
Q 018519 236 VSNH--GARQLDYVPATIMALEEVVKATQ---GRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 298 (354)
Q Consensus 236 vs~~--gg~~~~~~~~~~~~l~~i~~~~~---~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l~ 298 (354)
+... |.......+..++.+.++++.++ .++|++++|||+ .+.+.+++..|||+|.+||++..
T Consensus 146 ~~~~~pg~~g~~~~~~~~~~i~~l~~~~~~~~~~~pi~v~GGI~-~~n~~~~~~aGad~vvvgSaI~~ 212 (230)
T 1rpx_A 146 IMSVNPGFGGQSFIESQVKKISDLRKICAERGLNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFG 212 (230)
T ss_dssp EESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESSCC-TTTHHHHHHHTCCEEEESHHHHT
T ss_pred EEEEcCCCCCccccHHHHHHHHHHHHHHHhcCCCceEEEECCCC-HHHHHHHHHcCCCEEEEChhhhC
Confidence 5442 22111223344556666666542 268999999998 78888888999999999998763
No 119
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=97.92 E-value=2.3e-05 Score=71.33 Aligned_cols=77 Identities=26% Similarity=0.298 Sum_probs=59.4
Q ss_pred CHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHHH
Q 018519 219 TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 298 (354)
Q Consensus 219 ~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l~ 298 (354)
..+.++.+.++|+|.|.++.-.+. .......++.+.++++.+ ++||++.|||++..++.+++++|||+|.+|+..+-
T Consensus 33 ~~~~a~~~~~~Gad~i~v~d~~~~-~~~~~~~~~~i~~i~~~~--~iPvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~ 109 (252)
T 1ka9_F 33 PVEAARAYDEAGADELVFLDISAT-HEERAILLDVVARVAERV--FIPLTVGGGVRSLEDARKLLLSGADKVSVNSAAVR 109 (252)
T ss_dssp HHHHHHHHHHHTCSCEEEEECCSS-TTCHHHHHHHHHHHHTTC--CSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEcCCcc-ccCccccHHHHHHHHHhC--CCCEEEECCcCCHHHHHHHHHcCCCEEEEChHHHh
Confidence 467788999999999998643211 011123455677776655 79999999999999999999999999999997763
No 120
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=97.92 E-value=2.2e-05 Score=71.44 Aligned_cols=77 Identities=17% Similarity=0.223 Sum_probs=59.0
Q ss_pred CHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHHH
Q 018519 219 TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 298 (354)
Q Consensus 219 ~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l~ 298 (354)
..+.++.+.++|+|.|.++.-.+.. ......++.+.++++.+ ++||++.|||++..|+.++++.|||+|.+|+..+.
T Consensus 32 ~~~~a~~~~~~Gad~i~v~d~~~~~-~~~~~~~~~i~~i~~~~--~ipvi~~ggI~~~~~~~~~~~~Gad~V~lg~~~l~ 108 (253)
T 1thf_D 32 PVELGKFYSEIGIDELVFLDITASV-EKRKTMLELVEKVAEQI--DIPFTVGGGIHDFETASELILRGADKVSINTAAVE 108 (253)
T ss_dssp HHHHHHHHHHTTCCEEEEEESSCSS-SHHHHHHHHHHHHHTTC--CSCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEECCchhh-cCCcccHHHHHHHHHhC--CCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHHHh
Confidence 4567888999999999987532211 11223455666666654 79999999999999999999999999999997653
No 121
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=97.92 E-value=1.5e-05 Score=73.36 Aligned_cols=78 Identities=17% Similarity=0.204 Sum_probs=62.2
Q ss_pred cCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcC---CccEEEcCCCCCHHHHHHHHHcCcCEEEEc
Q 018519 217 VLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQG---RIPVFLDGGVRRGTDVFKALALGASGIFIG 293 (354)
Q Consensus 217 i~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~---~i~vi~~GGi~~g~dv~kalalGAd~V~ig 293 (354)
+.+.+++.++.+.|+|.|-+.|..-+.. .+.++.+.++.+.++. ++|+|+.|||.|++|+.+... |||+|.||
T Consensus 161 v~~~~E~~~a~~~gad~IGvn~~~l~~~---~~dl~~~~~L~~~i~~~~~~~~vIAegGI~s~~dv~~l~~-Ga~gvlVG 236 (254)
T 1vc4_A 161 VHTERELEIALEAGAEVLGINNRDLATL---HINLETAPRLGRLARKRGFGGVLVAESGYSRKEELKALEG-LFDAVLIG 236 (254)
T ss_dssp ECSHHHHHHHHHHTCSEEEEESBCTTTC---CBCTTHHHHHHHHHHHTTCCSEEEEESCCCSHHHHHTTTT-TCSEEEEC
T ss_pred ECCHHHHHHHHHcCCCEEEEccccCcCC---CCCHHHHHHHHHhCccccCCCeEEEEcCCCCHHHHHHHHc-CCCEEEEe
Confidence 4678899999999999999877543322 3334555566665543 689999999999999999999 99999999
Q ss_pred HHHHH
Q 018519 294 RPVVY 298 (354)
Q Consensus 294 r~~l~ 298 (354)
+.++.
T Consensus 237 sAl~~ 241 (254)
T 1vc4_A 237 TSLMR 241 (254)
T ss_dssp HHHHT
T ss_pred HHHcC
Confidence 99875
No 122
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=97.90 E-value=3.8e-05 Score=72.49 Aligned_cols=45 Identities=38% Similarity=0.626 Sum_probs=39.7
Q ss_pred HHHHHHHHHhcCCccE--EEcCCCCCHHHHHHHHHcCcCEEEEcHHHHH
Q 018519 252 MALEEVVKATQGRIPV--FLDGGVRRGTDVFKALALGASGIFIGRPVVY 298 (354)
Q Consensus 252 ~~l~~i~~~~~~~i~v--i~~GGi~~g~dv~kalalGAd~V~igr~~l~ 298 (354)
+.|.++.+.. ++|| |+.|||.|++|+.+++.+|||+|++|+.++.
T Consensus 230 ell~~i~~~~--~IPVV~VAeGGI~Tpeda~~~l~~GaDgV~VGsaI~~ 276 (330)
T 2yzr_A 230 EVLLEVKKLG--RLPVVNFAAGGVATPADAALMMQLGSDGVFVGSGIFK 276 (330)
T ss_dssp HHHHHHHHHT--SCSSEEEECSCCCSHHHHHHHHHTTCSCEEESHHHHT
T ss_pred HHHHHHHHhC--CCCeEEEEECCCCCHHHHHHHHHcCcCEEeeHHHHhc
Confidence 6777777755 7888 6999999999999999999999999998874
No 123
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=97.89 E-value=0.00019 Score=66.48 Aligned_cols=79 Identities=18% Similarity=0.185 Sum_probs=54.0
Q ss_pred CCHHHHHHHHHhCCCEEEEe-cCCcC--CCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcH
Q 018519 218 LTAEDARIAVQAGAAGIIVS-NHGAR--QLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 294 (354)
Q Consensus 218 ~~~~~a~~~~~~G~d~I~vs-~~gg~--~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr 294 (354)
.+.+.++...+.+..++.+. -.|-+ ......+..+.+.++++.. ++||++-|||++++++.++ .|||+|.+|+
T Consensus 155 s~~eri~~ia~~~~gfiy~vs~~G~TG~~~~~~~~~~~~v~~vr~~~--~~Pv~vGfGI~t~e~a~~~--~~ADgVIVGS 230 (271)
T 1ujp_A 155 STDARIATVVRHATGFVYAVSVTGVTGMRERLPEEVKDLVRRIKART--ALPVAVGFGVSGKATAAQA--AVADGVVVGS 230 (271)
T ss_dssp CCHHHHHHHHTTCCSCEEEECC------------CCHHHHHHHHTTC--CSCEEEESCCCSHHHHHHH--TTSSEEEECH
T ss_pred CCHHHHHHHHHhCCCCEEEEecCcccCCCCCCCccHHHHHHHHHhhc--CCCEEEEcCCCCHHHHHHh--cCCCEEEECh
Confidence 45676666666666666543 22222 1112234456777887765 7999999999999999996 9999999999
Q ss_pred HHHHHH
Q 018519 295 PVVYSL 300 (354)
Q Consensus 295 ~~l~~~ 300 (354)
.+...+
T Consensus 231 Ai~~~~ 236 (271)
T 1ujp_A 231 ALVRAL 236 (271)
T ss_dssp HHHHHH
T ss_pred HHhccc
Confidence 998764
No 124
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=97.88 E-value=8.9e-05 Score=66.61 Aligned_cols=170 Identities=20% Similarity=0.179 Sum_probs=95.3
Q ss_pred HHHHHHHHcCCcEEecCCCCCCHHHHHhhCC--Cce--EEEEeec--CChHHHHHHHHHHHHcCCCEEEEecCCCCCCch
Q 018519 92 ATARAASAAGTIMTLSSWSTSSVEEVASTGP--GIR--FFQLYVY--KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRR 165 (354)
Q Consensus 92 ~la~aa~~~G~~~~~s~~~~~~~eei~~~~~--~~~--~~QLy~~--~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r 165 (354)
.+.+.|.++|...++-.- .-+....+... +.. .+--|+. ...+.....++.|.+.|++.|++.++....
T Consensus 23 ~l~~~a~~~~~~aVcv~p--~~v~~~~~~l~~~~v~v~~vigFP~G~~~~~~k~~e~~~Ai~~GAdevd~vinig~~--- 97 (220)
T 1ub3_A 23 KAAEEALEYGFYGLCIPP--SYVAWVRARYPHAPFRLVTVVGFPLGYQEKEVKALEAALACARGADEVDMVLHLGRA--- 97 (220)
T ss_dssp HHHHHHHHHTCSEEECCG--GGHHHHHHHCTTCSSEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSEEEEECCHHHH---
T ss_pred HHHHHHHHhCCCEEEECH--HHHHHHHHHhCCCCceEEEEecCCCCCCchHHHHHHHHHHHHcCCCEEEecccchhh---
Confidence 677777788876554211 11222222211 111 1111221 233444455677788999999998764210
Q ss_pred hHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCC---cccccccCCHHHH----HHHHHhCCCEEEEec
Q 018519 166 EADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDR---SLSWKGVLTAEDA----RIAVQAGAAGIIVSN 238 (354)
Q Consensus 166 ~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~w~Gi~~~~~a----~~~~~~G~d~I~vs~ 238 (354)
+ .+ +. ......+.++++....+ .+.-.+.++.+.. +.+.++|+|+|..|.
T Consensus 98 ----~------~g----~~---------~~v~~ei~~v~~a~~~~~lkvIlet~~l~~e~i~~a~~ia~eaGADfVKTsT 154 (220)
T 1ub3_A 98 ----K------AG----DL---------DYLEAEVRAVREAVPQAVLKVILETGYFSPEEIARLAEAAIRGGADFLKTST 154 (220)
T ss_dssp ----H------TT----CH---------HHHHHHHHHHHHHSTTSEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECCC
T ss_pred ----h------CC----CH---------HHHHHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhCCCEEEeCC
Confidence 0 00 00 00112244444433222 1111144555543 466899999999864
Q ss_pred CCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEc
Q 018519 239 HGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 293 (354)
Q Consensus 239 ~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~ig 293 (354)
. +..+.++.+.+...++.++.++||-++|||++.+|+++.+.+||+.++..
T Consensus 155 G----f~~~gat~~dv~~m~~~vg~~v~VkaaGGirt~~~al~~i~aGa~RiG~S 205 (220)
T 1ub3_A 155 G----FGPRGASLEDVALLVRVAQGRAQVKAAGGIRDRETALRMLKAGASRLGTS 205 (220)
T ss_dssp S----SSSCCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEET
T ss_pred C----CCCCCCCHHHHHHHHHhhCCCCeEEEECCCCCHHHHHHHHHCCCcccchh
Confidence 1 11234566666666666666899999999999999999999999944433
No 125
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=97.88 E-value=0.00017 Score=64.48 Aligned_cols=118 Identities=19% Similarity=0.193 Sum_probs=83.9
Q ss_pred EEEEeecCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHh
Q 018519 126 FFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVA 205 (354)
Q Consensus 126 ~~QLy~~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (354)
.+-+....+.+....+++.+.+.|++.|.+|+.+|.. ...++++.+
T Consensus 15 vi~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a----------------------------------~~~I~~l~~ 60 (217)
T 3lab_A 15 LIPVIVIDDLVHAIPMAKALVAGGVHLLEVTLRTEAG----------------------------------LAAISAIKK 60 (217)
T ss_dssp EEEEECCSCGGGHHHHHHHHHHTTCCEEEEETTSTTH----------------------------------HHHHHHHHH
T ss_pred EEEEEEcCCHHHHHHHHHHHHHcCCCEEEEeCCCccH----------------------------------HHHHHHHHH
Confidence 4444556788888899999999999999999987641 112344444
Q ss_pred hhcCCcccccccCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCc------cEEEcCCCCCHHHH
Q 018519 206 GQIDRSLSWKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRI------PVFLDGGVRRGTDV 279 (354)
Q Consensus 206 ~~~~~~~~w~Gi~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i------~vi~~GGi~~g~dv 279 (354)
......++-..|++.++++.+.++|+++|+- -+ .+.+.+....+. ++ |++- |+.|++++
T Consensus 61 ~~p~~~IGAGTVlt~~~a~~ai~AGA~fivs-P~---------~~~evi~~~~~~---~v~~~~~~~~~P--G~~TptE~ 125 (217)
T 3lab_A 61 AVPEAIVGAGTVCTADDFQKAIDAGAQFIVS-PG---------LTPELIEKAKQV---KLDGQWQGVFLP--GVATASEV 125 (217)
T ss_dssp HCTTSEEEEECCCSHHHHHHHHHHTCSEEEE-SS---------CCHHHHHHHHHH---HHHCSCCCEEEE--EECSHHHH
T ss_pred HCCCCeEeeccccCHHHHHHHHHcCCCEEEe-CC---------CcHHHHHHHHHc---CCCccCCCeEeC--CCCCHHHH
Confidence 4333334433578999999999999999964 21 123444443332 46 7776 79999999
Q ss_pred HHHHHcCcCEEEE
Q 018519 280 FKALALGASGIFI 292 (354)
Q Consensus 280 ~kalalGAd~V~i 292 (354)
.+|+.+|+|.|-+
T Consensus 126 ~~A~~~Gad~vK~ 138 (217)
T 3lab_A 126 MIAAQAGITQLKC 138 (217)
T ss_dssp HHHHHTTCCEEEE
T ss_pred HHHHHcCCCEEEE
Confidence 9999999999976
No 126
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=97.87 E-value=4.2e-05 Score=68.96 Aligned_cols=77 Identities=26% Similarity=0.286 Sum_probs=60.7
Q ss_pred CCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHH
Q 018519 218 LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 297 (354)
Q Consensus 218 ~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l 297 (354)
...+.++.+.++|+|+|.++.-.+.. ......++.+.++++.+ ++||++.|||.+..++.+++++|||+|.++++.+
T Consensus 34 ~~~~~a~~~~~~G~d~i~v~~~~~~~-~~~~~~~~~i~~i~~~~--~ipvi~~g~i~~~~~~~~~~~~Gad~V~i~~~~~ 110 (253)
T 1h5y_A 34 DPVEMAVRYEEEGADEIAILDITAAP-EGRATFIDSVKRVAEAV--SIPVLVGGGVRSLEDATTLFRAGADKVSVNTAAV 110 (253)
T ss_dssp CHHHHHHHHHHTTCSCEEEEECCCCT-TTHHHHHHHHHHHHHHC--SSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHH
T ss_pred cHHHHHHHHHHcCCCEEEEEeCCccc-cCCcccHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCCCEEEEChHHh
Confidence 35678899999999999997532211 11223456677777766 7999999999999999999999999999999865
No 127
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=97.85 E-value=0.0001 Score=65.48 Aligned_cols=182 Identities=13% Similarity=0.145 Sum_probs=99.9
Q ss_pred HHHHHHHHHcCCcE---Ee--cCC-CC--CCHHHH---HhhCCCceEEEEeecCChHHHHHHHHHHHHcCCCEEEEecCC
Q 018519 91 YATARAASAAGTIM---TL--SSW-ST--SSVEEV---ASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDT 159 (354)
Q Consensus 91 ~~la~aa~~~G~~~---~~--s~~-~~--~~~eei---~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~i~vd~ 159 (354)
...++.+.+.|+.+ .+ ++. .. ..++.+ ++..+.+..+-++. +|++. .++.+.++|++.+.+|...
T Consensus 19 ~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g~~~i~~i~~~~~~~~~v~l~v-~d~~~---~i~~~~~~gad~v~vh~~~ 94 (220)
T 2fli_A 19 ASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHSKLVFDCHLMV-VDPER---YVEAFAQAGADIMTIHTES 94 (220)
T ss_dssp HHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCHHHHHHHHTTCCSEEEEEEES-SSGGG---GHHHHHHHTCSEEEEEGGG
T ss_pred HHHHHHHHHcCCCEEEEEeecCCCCCccccCHHHHHHHHHhCCCCEEEEEee-cCHHH---HHHHHHHcCCCEEEEccCc
Confidence 36677788888754 11 221 11 124444 33333345555654 45432 3577788999999998654
Q ss_pred CCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCccccccc--CCHHHHHHHHHhCCCEEEEe
Q 018519 160 PRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKGV--LTAEDARIAVQAGAAGIIVS 237 (354)
Q Consensus 160 p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~Gi--~~~~~a~~~~~~G~d~I~vs 237 (354)
+.. + ....+.+... ...+ +..+ .+..+.......++|.|.+.
T Consensus 95 ~~~-------------~---------------------~~~~~~~~~~-g~~i-~~~~~~~t~~e~~~~~~~~~d~vl~~ 138 (220)
T 2fli_A 95 TRH-------------I---------------------HGALQKIKAA-GMKA-GVVINPGTPATALEPLLDLVDQVLIM 138 (220)
T ss_dssp CSC-------------H---------------------HHHHHHHHHT-TSEE-EEEECTTSCGGGGGGGTTTCSEEEEE
T ss_pred ccc-------------H---------------------HHHHHHHHHc-CCcE-EEEEcCCCCHHHHHHHHhhCCEEEEE
Confidence 310 0 0011111111 1111 1111 23333333445679988763
Q ss_pred c-C-CcCCCCCCcChHHHHHHHHHHhc---CCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHHHHHhhcCHHHHHHHH
Q 018519 238 N-H-GARQLDYVPATIMALEEVVKATQ---GRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVL 312 (354)
Q Consensus 238 ~-~-gg~~~~~~~~~~~~l~~i~~~~~---~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l~~~~~~G~~gv~~~l 312 (354)
+ + |+......+..++.+.++++.+. .++||+++|||+ .+++.+++.+|||+|.+||++.. + +...+.+
T Consensus 139 ~~~~g~~g~~~~~~~~~~i~~~~~~~~~~~~~~~i~v~GGI~-~~~~~~~~~~Gad~vvvGsai~~-----~-~d~~~a~ 211 (220)
T 2fli_A 139 TVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGGVD-NKTIRACYEAGANVFVAGSYLFK-----A-SDLVSQV 211 (220)
T ss_dssp SSCTTCSSCCCCGGGHHHHHHHHHHHHHTTCCCEEEEESSCC-TTTHHHHHHHTCCEEEESHHHHT-----S-SCHHHHH
T ss_pred EECCCCcccccCHHHHHHHHHHHHHHHhcCCCceEEEECcCC-HHHHHHHHHcCCCEEEEChHHhC-----C-CCHHHHH
Confidence 3 2 22111223444555666665542 268999999999 89999988899999999999764 2 2244555
Q ss_pred HHHHHHH
Q 018519 313 EMLREEF 319 (354)
Q Consensus 313 ~~l~~el 319 (354)
+.+++++
T Consensus 212 ~~~~~~~ 218 (220)
T 2fli_A 212 QTLRTAL 218 (220)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 5665544
No 128
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=97.85 E-value=0.00047 Score=61.97 Aligned_cols=182 Identities=16% Similarity=0.150 Sum_probs=102.1
Q ss_pred HHHHHHHHcCCcEE-ec----C---CCCCCHHH---HHhhCCCceEEEEeecCChHHHHHHHHHHHHcCCCEEEEecCCC
Q 018519 92 ATARAASAAGTIMT-LS----S---WSTSSVEE---VASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTP 160 (354)
Q Consensus 92 ~la~aa~~~G~~~~-~s----~---~~~~~~ee---i~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~i~vd~p 160 (354)
...+.+.+.|+.++ +- . ..+..++. +++..+.+.-+-|+. +|++. .++.+.++|++.+.+|.+..
T Consensus 23 ~~i~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~~~~~~~v~lmv-~d~~~---~i~~~~~agad~v~vH~~~~ 98 (228)
T 1h1y_A 23 AEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYLDCHLMV-TNPSD---YVEPLAKAGASGFTFHIEVS 98 (228)
T ss_dssp HHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTTCCSEEEEEEES-SCGGG---GHHHHHHHTCSEEEEEGGGC
T ss_pred HHHHHHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhhcCCcEEEEEEe-cCHHH---HHHHHHHcCCCEEEECCCCc
Confidence 56677777886643 22 1 11223443 343333355556666 56533 46777779999999987543
Q ss_pred CCC-chhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCccccc-ccCC-HHHHHHHHHh--CCCEEE
Q 018519 161 RLG-RREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWK-GVLT-AEDARIAVQA--GAAGII 235 (354)
Q Consensus 161 ~~g-~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~-Gi~~-~~~a~~~~~~--G~d~I~ 235 (354)
-.. .+ .+..+.+. . ..++.. ...+ .+..+...+. ++|.|.
T Consensus 99 ~~~~~~---------------------------------~~~~i~~~-g-~~igv~~~p~t~~e~~~~~~~~~~~~d~vl 143 (228)
T 1h1y_A 99 RDNWQE---------------------------------LIQSIKAK-G-MRPGVSLRPGTPVEEVFPLVEAENPVELVL 143 (228)
T ss_dssp TTTHHH---------------------------------HHHHHHHT-T-CEEEEEECTTSCGGGGHHHHHSSSCCSEEE
T ss_pred ccHHHH---------------------------------HHHHHHHc-C-CCEEEEEeCCCCHHHHHHHHhcCCCCCEEE
Confidence 210 00 01111111 0 011110 1112 2333444444 999998
Q ss_pred Eec-CCc-CCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHHHHHhhcCHHHHHHHHH
Q 018519 236 VSN-HGA-RQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLE 313 (354)
Q Consensus 236 vs~-~gg-~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l~~~~~~G~~gv~~~l~ 313 (354)
+.. ++| ......+..++.+.++++... ++||+++|||.. +.+.+++..|||.+.+||.++.+ +..+..++
T Consensus 144 ~~sv~pg~~g~~~~~~~l~~i~~~~~~~~-~~pi~v~GGI~~-~ni~~~~~aGaD~vvvGsai~~~------~d~~~~~~ 215 (228)
T 1h1y_A 144 VMTVEPGFGGQKFMPEMMEKVRALRKKYP-SLDIEVDGGLGP-STIDVAASAGANCIVAGSSIFGA------AEPGEVIS 215 (228)
T ss_dssp EESSCTTCSSCCCCGGGHHHHHHHHHHCT-TSEEEEESSCST-TTHHHHHHHTCCEEEESHHHHTS------SCHHHHHH
T ss_pred EEeecCCCCcccCCHHHHHHHHHHHHhcC-CCCEEEECCcCH-HHHHHHHHcCCCEEEECHHHHCC------CCHHHHHH
Confidence 843 222 112233455667777777653 789999999997 78888889999999999987531 22444555
Q ss_pred HHHHHHH
Q 018519 314 MLREEFE 320 (354)
Q Consensus 314 ~l~~el~ 320 (354)
.+++.++
T Consensus 216 ~l~~~~~ 222 (228)
T 1h1y_A 216 ALRKSVE 222 (228)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6655544
No 129
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=97.82 E-value=0.00048 Score=67.31 Aligned_cols=40 Identities=20% Similarity=0.129 Sum_probs=34.3
Q ss_pred HHHHhcCCccEEEcCCCCCHHHHHHHHHc-CcCEEEEcHHHHH
Q 018519 257 VVKATQGRIPVFLDGGVRRGTDVFKALAL-GASGIFIGRPVVY 298 (354)
Q Consensus 257 i~~~~~~~i~vi~~GGi~~g~dv~kalal-GAd~V~igr~~l~ 298 (354)
+++.+ ++|||+.|||.+..++.+.+.. +||.|.+|||+|.
T Consensus 313 ir~~~--~~pvi~~G~~~~~~~~~~~~~~~~aDlV~~gR~~ia 353 (400)
T 4gbu_A 313 VYSIW--KGPVIRAGNFALHPEVVREEVKDKRTLIGYGRFFIS 353 (400)
T ss_dssp HHHHC--CSCEEEESSCTTCHHHHHHHTTSTTEEEECCHHHHH
T ss_pred HHHHh--CCCEEEeCCCCChHHHHHHHHcCCCeEhHHHHHHHH
Confidence 45555 7999999999999999888875 5999999999985
No 130
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=97.79 E-value=2.3e-05 Score=71.08 Aligned_cols=77 Identities=17% Similarity=0.120 Sum_probs=60.3
Q ss_pred CCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHH
Q 018519 218 LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 297 (354)
Q Consensus 218 ~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l 297 (354)
...+.++.+.++|+|.|.++...+.. ......++.+.+++ .+ ++||++.|||++..|+.+++++|||+|++|+..+
T Consensus 31 ~~~~~a~~~~~~Gad~i~v~d~~~~~-~~~~~~~~~i~~i~-~~--~ipvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l 106 (241)
T 1qo2_A 31 DPVELVEKLIEEGFTLIHVVDLSNAI-ENSGENLPVLEKLS-EF--AEHIQIGGGIRSLDYAEKLRKLGYRRQIVSSKVL 106 (241)
T ss_dssp CHHHHHHHHHHTTCCCEEEEEHHHHH-HCCCTTHHHHHHGG-GG--GGGEEEESSCCSHHHHHHHHHTTCCEEEECHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEecccccc-cCCchhHHHHHHHH-hc--CCcEEEECCCCCHHHHHHHHHCCCCEEEECchHh
Confidence 35678899999999999996521100 01234577777777 55 7999999999999999999999999999999765
Q ss_pred H
Q 018519 298 Y 298 (354)
Q Consensus 298 ~ 298 (354)
.
T Consensus 107 ~ 107 (241)
T 1qo2_A 107 E 107 (241)
T ss_dssp H
T ss_pred h
Confidence 3
No 131
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=97.77 E-value=6.4e-05 Score=69.56 Aligned_cols=71 Identities=17% Similarity=0.146 Sum_probs=58.7
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHH
Q 018519 221 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 297 (354)
Q Consensus 221 ~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l 297 (354)
.-+..+.+.|...|.+...+ .+...+.+.++++.+.+.+||++-|||+|.+|+.+++.+|||.|.+|+.++
T Consensus 190 aYa~~gad~G~~lV~LD~~~------~~v~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~aGAD~VVVGSAav 260 (286)
T 3vk5_A 190 RYLHVARAFGFHMVYLYSRN------EHVPPEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLDSGADYVGFAGALE 260 (286)
T ss_dssp HHHHHHHHTTCSEEEEECSS------SCCCHHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHHTTCSEEEESGGGS
T ss_pred HHHHHHHHcCCCEEEEcCCC------CcCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHcCCCEEEECchhh
Confidence 34556678899999997533 345568889998877447999999999999999999999999999999765
No 132
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=97.74 E-value=0.00066 Score=59.64 Aligned_cols=75 Identities=20% Similarity=0.166 Sum_probs=49.8
Q ss_pred CHHH-HHHHHHhCCCEEEEecCCcCCCCCCcChH-HHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHH
Q 018519 219 TAED-ARIAVQAGAAGIIVSNHGARQLDYVPATI-MALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPV 296 (354)
Q Consensus 219 ~~~~-a~~~~~~G~d~I~vs~~gg~~~~~~~~~~-~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~ 296 (354)
++++ ++.+.+.|+|.|.+.- +......+.... +.+.++... ++|++++|||+ .+.+.++++.|||+|.+||++
T Consensus 115 ~p~~~~~~~~~~g~d~v~~~~-~~~~~~~g~~~~~~~i~~~~~~---~~pi~v~GGI~-~~~~~~~~~aGad~vvvGsaI 189 (207)
T 3ajx_A 115 DKATRAQEVRALGAKFVEMHA-GLDEQAKPGFDLNGLLAAGEKA---RVPFSVAGGVK-VATIPAVQKAGAEVAVAGGAI 189 (207)
T ss_dssp SHHHHHHHHHHTTCSEEEEEC-CHHHHTSTTCCTHHHHHHHHHH---TSCEEEESSCC-GGGHHHHHHTTCSEEEESHHH
T ss_pred ChHHHHHHHHHhCCCEEEEEe-cccccccCCCchHHHHHHhhCC---CCCEEEECCcC-HHHHHHHHHcCCCEEEEeeec
Confidence 5555 6677788999994421 110001122222 334433332 68999999998 788889999999999999997
Q ss_pred HH
Q 018519 297 VY 298 (354)
Q Consensus 297 l~ 298 (354)
..
T Consensus 190 ~~ 191 (207)
T 3ajx_A 190 YG 191 (207)
T ss_dssp HT
T ss_pred cC
Confidence 64
No 133
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=97.74 E-value=0.0009 Score=62.65 Aligned_cols=64 Identities=28% Similarity=0.447 Sum_probs=48.3
Q ss_pred HHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCH-H----HHHHHHHcCcCEEEEcHHH
Q 018519 222 DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG-T----DVFKALALGASGIFIGRPV 296 (354)
Q Consensus 222 ~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g-~----dv~kalalGAd~V~igr~~ 296 (354)
.++.+.++|+|+|.++-.+ +.+.++.+.+ ++||++.||+... . .+.+++.+||+++.+||.+
T Consensus 194 aariA~elGAD~VKt~~t~-----------e~~~~vv~~~--~vPVv~~GG~~~~~~~~l~~v~~ai~aGA~Gv~vGRnI 260 (295)
T 3glc_A 194 ATRIAAEMGAQIIKTYYVE-----------KGFERIVAGC--PVPIVIAGGKKLPEREALEMCWQAIDQGASGVDMGRNI 260 (295)
T ss_dssp HHHHHHHTTCSEEEEECCT-----------TTHHHHHHTC--SSCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEESHHH
T ss_pred HHHHHHHhCCCEEEeCCCH-----------HHHHHHHHhC--CCcEEEEECCCCCHHHHHHHHHHHHHhCCeEEEeHHHH
Confidence 5678889999999985211 2356666655 7999999999954 3 3456678999999999987
Q ss_pred HH
Q 018519 297 VY 298 (354)
Q Consensus 297 l~ 298 (354)
+.
T Consensus 261 ~q 262 (295)
T 3glc_A 261 FQ 262 (295)
T ss_dssp HT
T ss_pred hc
Confidence 64
No 134
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=97.72 E-value=9.1e-05 Score=66.94 Aligned_cols=77 Identities=25% Similarity=0.235 Sum_probs=61.1
Q ss_pred CCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHH
Q 018519 218 LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 297 (354)
Q Consensus 218 ~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l 297 (354)
...+.++.+.++|+|.|.+..--+.. ...+.. +.+.++++.+ ++|+++.|||++++++.+++++|||.|.+|+..+
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~~-~~~~~~-~~i~~i~~~~--~ipv~v~ggi~~~~~~~~~l~~Gad~V~lg~~~l 107 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAAF-GRGSNH-ELLAEVVGKL--DVQVELSGGIRDDESLAAALATGCARVNVGTAAL 107 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHHT-TSCCCH-HHHHHHHHHC--SSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEEcCcccc-cCCChH-HHHHHHHHhc--CCcEEEECCCCCHHHHHHHHHcCCCEEEECchHh
Confidence 35678889999999999996521111 123344 7788888876 8999999999999999999999999999999765
Q ss_pred H
Q 018519 298 Y 298 (354)
Q Consensus 298 ~ 298 (354)
.
T Consensus 108 ~ 108 (244)
T 2y88_A 108 E 108 (244)
T ss_dssp H
T ss_pred h
Confidence 3
No 135
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=97.72 E-value=5.3e-05 Score=69.49 Aligned_cols=77 Identities=16% Similarity=0.157 Sum_probs=60.3
Q ss_pred CCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHH
Q 018519 218 LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 297 (354)
Q Consensus 218 ~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l 297 (354)
...+.++.+.++|+|.|.++.-.+... .....++.+.++++.+ ++||++.|||++..|+.+++.+|||+|.+|+.++
T Consensus 31 ~~~~~a~~~~~~Ga~~i~v~d~~~~~~-~~g~~~~~i~~i~~~~--~iPvi~~ggi~~~~~i~~~~~~Gad~v~lg~~~~ 107 (266)
T 2w6r_A 31 LLRDWVVEVEKRGAGEILLTSIDRDGT-KSGYDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLAGADKALAASVFH 107 (266)
T ss_dssp EHHHHHHHHHHHTCSEEEEEETTTSSC-SSCCCHHHHHHHGGGC--CSCEEEESCCCSTHHHHHHHHHTCSEEECCCCC-
T ss_pred CHHHHHHHHHHCCCCEEEEEecCcccC-CCcccHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCCcHhhhhHHHH
Confidence 356788899999999999965321111 1224577788887765 8999999999999999999999999999998665
No 136
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=97.67 E-value=8.7e-05 Score=70.85 Aligned_cols=129 Identities=13% Similarity=0.069 Sum_probs=88.0
Q ss_pred CCcEEecCCCCCCHHHHHhhCCCceEEEEeecCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCc
Q 018519 101 GTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLT 180 (354)
Q Consensus 101 G~~~~~s~~~~~~~eei~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~ 180 (354)
..|++++.|+..+.++++++.....|+|+|...+++.+.+.++++++.|+. ++++.+ .++
T Consensus 46 ~~Pi~~a~mag~s~~~la~a~~~~gg~g~~~~~~~~~~~~~i~~~~~~g~~---v~v~~g---~~~-------------- 105 (336)
T 1ypf_A 46 KLPVVPANMQTIIDERIATYLAENNYFYIMHRFQPEKRISFIRDMQSRGLI---ASISVG---VKE-------------- 105 (336)
T ss_dssp SSSEEECSSTTTCCHHHHHHHHHTTCCCCCCCSSGGGHHHHHHHHHHTTCC---CEEEEC---CSH--------------
T ss_pred cCcEEECCCCCCChHHHHHHHHhCCCEEEecCCCCHHHHHHHHHHHhcCCe---EEEeCC---CCH--------------
Confidence 357888999888888886532234689999888888888888888876541 111100 000
Q ss_pred cccccCCccCcCcccchhhHHHHHhhhcCCcccccccCCHHHHHHHHHhC--CCEEEEecCCcCCCCCCcChHHHHHHHH
Q 018519 181 LKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKGVLTAEDARIAVQAG--AAGIIVSNHGARQLDYVPATIMALEEVV 258 (354)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~Gi~~~~~a~~~~~~G--~d~I~vs~~gg~~~~~~~~~~~~l~~i~ 258 (354)
...+.++.+.++| ++.|.+....| .....++.+.+++
T Consensus 106 -------------------------------------~~~~~a~~~~~~g~~~~~i~i~~~~G----~~~~~~~~i~~lr 144 (336)
T 1ypf_A 106 -------------------------------------DEYEFVQQLAAEHLTPEYITIDIAHG----HSNAVINMIQHIK 144 (336)
T ss_dssp -------------------------------------HHHHHHHHHHHTTCCCSEEEEECSSC----CSHHHHHHHHHHH
T ss_pred -------------------------------------HHHHHHHHHHhcCCCCCEEEEECCCC----CcHHHHHHHHHHH
Confidence 0113466778888 99988743111 1234567788888
Q ss_pred HHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEE
Q 018519 259 KATQGRIPVFLDGGVRRGTDVFKALALGASGIFI 292 (354)
Q Consensus 259 ~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~i 292 (354)
+.. +.+++..|.|.+.+++.++..+|||+|.+
T Consensus 145 ~~~--~~~~vi~G~v~s~e~A~~a~~aGad~Ivv 176 (336)
T 1ypf_A 145 KHL--PESFVIAGNVGTPEAVRELENAGADATKV 176 (336)
T ss_dssp HHC--TTSEEEEEEECSHHHHHHHHHHTCSEEEE
T ss_pred HhC--CCCEEEECCcCCHHHHHHHHHcCCCEEEE
Confidence 876 33455556699999999999999999999
No 137
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=97.64 E-value=0.00066 Score=61.05 Aligned_cols=115 Identities=17% Similarity=0.211 Sum_probs=75.9
Q ss_pred EeecCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc
Q 018519 129 LYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI 208 (354)
Q Consensus 129 Ly~~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (354)
+....+.+...+.++.+.+.|++.+.++...+.. ...++++.+...
T Consensus 22 vir~~~~~~~~~~~~al~~gGv~~iel~~k~~~~----------------------------------~~~i~~l~~~~~ 67 (224)
T 1vhc_A 22 VIALDNADDILPLADTLAKNGLSVAEITFRSEAA----------------------------------ADAIRLLRANRP 67 (224)
T ss_dssp EECCSSGGGHHHHHHHHHHTTCCEEEEETTSTTH----------------------------------HHHHHHHHHHCT
T ss_pred EEeCCCHHHHHHHHHHHHHcCCCEEEEeccCchH----------------------------------HHHHHHHHHhCc
Confidence 3334677777888899999999999998654320 001233333321
Q ss_pred CCcccccccCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcC
Q 018519 209 DRSLSWKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGAS 288 (354)
Q Consensus 209 ~~~~~w~Gi~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd 288 (354)
.-.++..-+++.+++..|.++|||+|.. |+ .+.+.+...++ + .++++. |+.|++++.+|+.+|||
T Consensus 68 ~l~vgaGtvl~~d~~~~A~~aGAd~v~~---p~-------~d~~v~~~ar~-~--g~~~i~--Gv~t~~e~~~A~~~Gad 132 (224)
T 1vhc_A 68 DFLIAAGTVLTAEQVVLAKSSGADFVVT---PG-------LNPKIVKLCQD-L--NFPITP--GVNNPMAIEIALEMGIS 132 (224)
T ss_dssp TCEEEEESCCSHHHHHHHHHHTCSEEEC---SS-------CCHHHHHHHHH-T--TCCEEC--EECSHHHHHHHHHTTCC
T ss_pred CcEEeeCcEeeHHHHHHHHHCCCCEEEE---CC-------CCHHHHHHHHH-h--CCCEEe--ccCCHHHHHHHHHCCCC
Confidence 1112222356889999999999999943 21 12334444444 4 556665 49999999999999999
Q ss_pred EEEE
Q 018519 289 GIFI 292 (354)
Q Consensus 289 ~V~i 292 (354)
.|.+
T Consensus 133 ~vk~ 136 (224)
T 1vhc_A 133 AVKF 136 (224)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9999
No 138
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.64 E-value=7.3e-05 Score=66.48 Aligned_cols=81 Identities=16% Similarity=0.080 Sum_probs=60.4
Q ss_pred ccCCHHHHHHHHHhCCCEEEEecCCcCC---CCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEE
Q 018519 216 GVLTAEDARIAVQAGAAGIIVSNHGARQ---LDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFI 292 (354)
Q Consensus 216 Gi~~~~~a~~~~~~G~d~I~vs~~gg~~---~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~i 292 (354)
++.+++++..+. .|+|+|.++.-..+. ..+.+..++.+.++.+.+..++||++.|||. ++++.+++.+||++|.+
T Consensus 94 s~~t~~e~~~A~-~GaDyv~~g~vf~t~sk~~~~~~~g~~~l~~~~~~~~~~iPviaiGGI~-~~nv~~~~~~Ga~gVav 171 (210)
T 3ceu_A 94 SCHSVEEVKNRK-HFYDYVFMSPIYDSISKVNYYSTYTAEELREAQKAKIIDSKVMALGGIN-EDNLLEIKDFGFGGAVV 171 (210)
T ss_dssp EECSHHHHHTTG-GGSSEEEECCCC---------CCCCHHHHHHHHHTTCSSTTEEEESSCC-TTTHHHHHHTTCSEEEE
T ss_pred ecCCHHHHHHHh-hCCCEEEECCcCCCCCCCCCCCCCCHHHHHHHHHhcCCCCCEEEECCCC-HHHHHHHHHhCCCEEEE
Confidence 457899999998 999999985421111 1112345777877776521279999999998 89999999999999999
Q ss_pred cHHHHH
Q 018519 293 GRPVVY 298 (354)
Q Consensus 293 gr~~l~ 298 (354)
++.+..
T Consensus 172 ~s~i~~ 177 (210)
T 3ceu_A 172 LGDLWN 177 (210)
T ss_dssp SHHHHT
T ss_pred hHHhHc
Confidence 998753
No 139
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=97.63 E-value=0.00012 Score=66.33 Aligned_cols=76 Identities=25% Similarity=0.271 Sum_probs=60.3
Q ss_pred CCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHH
Q 018519 218 LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 297 (354)
Q Consensus 218 ~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l 297 (354)
...+.++.+.++|+|.|.|..--+.. ...... +.+.++++.. ++|+++.|||++++++.+++.+|||.|.+|+..+
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~-~~~~~~-~~i~~i~~~~--~ipv~v~ggI~~~~~~~~~l~~Gad~V~lg~~~l 108 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAF-GTGDNR-ALIAEVAQAM--DIKVELSGGIRDDDTLAAALATGCTRVNLGTAAL 108 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHH-TSCCCH-HHHHHHHHHC--SSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhh-cCCChH-HHHHHHHHhc--CCcEEEECCcCCHHHHHHHHHcCCCEEEECchHh
Confidence 35677889999999999986521111 122444 7788888776 8999999999999999999999999999999654
No 140
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=97.63 E-value=0.00016 Score=66.31 Aligned_cols=75 Identities=25% Similarity=0.209 Sum_probs=57.0
Q ss_pred ccCCHHHH----HHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEE
Q 018519 216 GVLTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIF 291 (354)
Q Consensus 216 Gi~~~~~a----~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~ 291 (354)
+-++.+.. +.+.++|+|+|.-|. | +..+.++.+.+.-.++.++++++|-++||||+.+|+++.+.+||+.++
T Consensus 168 ~~Lt~eei~~A~~ia~eaGADfVKTST-G---f~~~GAT~edV~lm~~~vg~~v~VKaAGGIrt~~~al~mi~aGA~RiG 243 (260)
T 3r12_A 168 CYLDTEEKIAACVISKLAGAHFVKTST-G---FGTGGATAEDVHLMKWIVGDEMGVKASGGIRTFEDAVKMIMYGADRIG 243 (260)
T ss_dssp GGCCHHHHHHHHHHHHHTTCSEEECCC-S---SSSCCCCHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEE
T ss_pred CCCCHHHHHHHHHHHHHhCcCEEEcCC-C---CCCCCCCHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHcCCceee
Confidence 54555544 456799999999863 2 123456677777777777779999999999999999999999999765
Q ss_pred EcH
Q 018519 292 IGR 294 (354)
Q Consensus 292 igr 294 (354)
..+
T Consensus 244 tS~ 246 (260)
T 3r12_A 244 TSS 246 (260)
T ss_dssp ESC
T ss_pred cch
Confidence 554
No 141
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=97.61 E-value=0.00053 Score=61.52 Aligned_cols=97 Identities=16% Similarity=0.115 Sum_probs=66.0
Q ss_pred CCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHH
Q 018519 218 LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 297 (354)
Q Consensus 218 ~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l 297 (354)
++.+.++.+.+.|++-+++.-....+.++...+.+.+..+++.++.+++|.++||| +..++.++...|||.+.+||++.
T Consensus 122 ~~~~~~~~~~~~~~~~~v~~~a~~~~~~Gvv~s~~e~~~ir~~~~~~~~i~v~gGI-~~~~~~~~~~aGad~~VvG~~I~ 200 (221)
T 3exr_A 122 WTYDQAQQWLDAGISQAIYHQSRDALLAGETWGEKDLNKVKKLIEMGFRVSVTGGL-SVDTLKLFEGVDVFTFIAGRGIT 200 (221)
T ss_dssp CCHHHHHHHHHTTCCEEEEECCHHHHHHTCCCCHHHHHHHHHHHHHTCEEEEESSC-CGGGGGGGTTCCCSEEEECHHHH
T ss_pred CCHHHHHHHHcCCHHHHHHHHHHhcCCCccccCHHHHHHHHHhhcCCceEEEECCC-CHHHHHHHHHCCCCEEEECchhh
Confidence 47888888888899998883211112233344455666777766547889999999 56677788889999999999855
Q ss_pred HHHhhcCHHHHHHHHHHHHHHHHH
Q 018519 298 YSLAAEGEKGVRRVLEMLREEFEL 321 (354)
Q Consensus 298 ~~~~~~G~~gv~~~l~~l~~el~~ 321 (354)
.+ +.....++.++++++.
T Consensus 201 ~a------~dp~~a~~~~~~~~~~ 218 (221)
T 3exr_A 201 EA------KNPAGAARAFKDEIKR 218 (221)
T ss_dssp TS------SSHHHHHHHHHHHHHH
T ss_pred CC------CCHHHHHHHHHHHHHH
Confidence 31 2233456666666654
No 142
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=97.59 E-value=0.0011 Score=59.71 Aligned_cols=89 Identities=19% Similarity=0.232 Sum_probs=61.7
Q ss_pred CCCEEEEec-C-CcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHHHHHhhcCHHH
Q 018519 230 GAAGIIVSN-H-GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKG 307 (354)
Q Consensus 230 G~d~I~vs~-~-gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l~~~~~~G~~g 307 (354)
.+|.|.+-. + |.......+..++-+.++++.. .+++|.++|||+ .+.+.++..+|||.+.+||++.. . +.
T Consensus 134 ~~D~Vl~msv~pGf~Gq~f~~~~l~ki~~lr~~~-~~~~I~VdGGI~-~~t~~~~~~aGAd~~VvGsaIf~-----a-~d 205 (228)
T 3ovp_A 134 QIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF-PSLDIEVDGGVG-PDTVHKCAEAGANMIVSGSAIMR-----S-ED 205 (228)
T ss_dssp GCSEEEEESSCTTTCSCCCCGGGHHHHHHHHHHC-TTCEEEEESSCS-TTTHHHHHHHTCCEEEESHHHHT-----C-SC
T ss_pred cCCeEEEeeecCCCCCcccCHHHHHHHHHHHHhc-CCCCEEEeCCcC-HHHHHHHHHcCCCEEEEeHHHhC-----C-CC
Confidence 478886632 2 2211223466677787777754 368999999995 88999999999999999997552 1 22
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 018519 308 VRRVLEMLREEFELAMALS 326 (354)
Q Consensus 308 v~~~l~~l~~el~~~m~~~ 326 (354)
....++.++++++......
T Consensus 206 p~~~~~~l~~~~~~~~~~~ 224 (228)
T 3ovp_A 206 PRSVINLLRNVCSEAAQKR 224 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhhc
Confidence 3456777777777766543
No 143
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=97.59 E-value=0.00046 Score=61.65 Aligned_cols=158 Identities=22% Similarity=0.171 Sum_probs=100.5
Q ss_pred CChhhHHHHHHHHHcCCcEEecCCCC-C---CHHHHHhhCCCceEEEEeecCChHHHHHHHHHHHHcCCCEEEEecCCCC
Q 018519 86 HPEGEYATARAASAAGTIMTLSSWST-S---SVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPR 161 (354)
Q Consensus 86 ~~~~e~~la~aa~~~G~~~~~s~~~~-~---~~eei~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~ 161 (354)
+++--..+++++-+.|+..+==++.+ . .++.+++..|.. .+= . ..=.+.+.++.+.++|++.++. |.
T Consensus 23 ~~~~a~~~a~al~~gGi~~iEvt~~t~~a~~~I~~l~~~~p~~-~IG--A--GTVlt~~~a~~ai~AGA~fivs----P~ 93 (217)
T 3lab_A 23 DLVHAIPMAKALVAGGVHLLEVTLRTEAGLAAISAIKKAVPEA-IVG--A--GTVCTADDFQKAIDAGAQFIVS----PG 93 (217)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTS-EEE--E--ECCCSHHHHHHHHHHTCSEEEE----SS
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCccHHHHHHHHHHHCCCC-eEe--e--ccccCHHHHHHHHHcCCCEEEe----CC
Confidence 44445699999999998865333332 2 334555566642 111 1 1112356688899999999864 32
Q ss_pred CCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCccccc-----ccCCHHHHHHHHHhCCCEEEE
Q 018519 162 LGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWK-----GVLTAEDARIAVQAGAAGIIV 236 (354)
Q Consensus 162 ~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~-----Gi~~~~~a~~~~~~G~d~I~v 236 (354)
. . | ++.+....... .=-|. |+.+++++.++.++|+|.|.+
T Consensus 94 ~-----------~-~----------------------evi~~~~~~~v-~~~~~~~~~PG~~TptE~~~A~~~Gad~vK~ 138 (217)
T 3lab_A 94 L-----------T-P----------------------ELIEKAKQVKL-DGQWQGVFLPGVATASEVMIAAQAGITQLKC 138 (217)
T ss_dssp C-----------C-H----------------------HHHHHHHHHHH-HCSCCCEEEEEECSHHHHHHHHHTTCCEEEE
T ss_pred C-----------c-H----------------------HHHHHHHHcCC-CccCCCeEeCCCCCHHHHHHHHHcCCCEEEE
Confidence 1 0 0 11122211111 01232 889999999999999999998
Q ss_pred ecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHH
Q 018519 237 SNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRP 295 (354)
Q Consensus 237 s~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~ 295 (354)
.- +.+ ......|..++..+ .++|++..|||. .+.+..++++|+.+|..|+.
T Consensus 139 FP--a~~----~gG~~~lkal~~p~-p~i~~~ptGGI~-~~N~~~~l~aGa~~~vgGs~ 189 (217)
T 3lab_A 139 FP--ASA----IGGAKLLKAWSGPF-PDIQFCPTGGIS-KDNYKEYLGLPNVICAGGSW 189 (217)
T ss_dssp TT--TTT----TTHHHHHHHHHTTC-TTCEEEEBSSCC-TTTHHHHHHSTTBCCEEESG
T ss_pred Cc--ccc----ccCHHHHHHHHhhh-cCceEEEeCCCC-HHHHHHHHHCCCEEEEEChh
Confidence 43 111 11246677776655 379999999998 89999999999998877753
No 144
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=97.58 E-value=0.0003 Score=62.04 Aligned_cols=77 Identities=14% Similarity=0.163 Sum_probs=59.0
Q ss_pred CHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHHH
Q 018519 219 TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 298 (354)
Q Consensus 219 ~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l~ 298 (354)
..+.++++...|+..+.+.+-+......+.. ++.+.++.+.. ++|+|+.||+.+++|+.+++.+|||+|++|++++.
T Consensus 132 ~~~~i~~~~~~~~~~vli~~~~~~g~~~g~~-~~~i~~~~~~~--~~Pvia~~g~~~~~~~~~~~~~G~~~~~vg~a~~~ 208 (237)
T 3cwo_X 132 LRDWVVEVEKRGAGEILLTSIDRDGTKSGYD-TEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLAGADAALAASVFHF 208 (237)
T ss_dssp HHHHHHHHHHHTCSEEEEEETTTTTCCSCCC-HHHHHHHGGGC--CSCEEEESCCCSHHHHHHHHHHTCSEEEESHHHHT
T ss_pred HHHHHHHHhhcCCCeEEEEecCCCCcccccc-HHHHHHHHHhc--CCCEEecCCCCCHHHHHHHHHcCcHHHhhhHHHHc
Confidence 3566778888999978775422111122333 67777777655 89999999999999999999999999999998874
No 145
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=97.58 E-value=0.0021 Score=60.11 Aligned_cols=188 Identities=14% Similarity=0.074 Sum_probs=113.3
Q ss_pred eEecccccccccCChhhHHHHHHHHHcCCcEEecCCC-------------CCCHHHHH-------hhCCCceEEEE---e
Q 018519 74 IMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWS-------------TSSVEEVA-------STGPGIRFFQL---Y 130 (354)
Q Consensus 74 i~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~s~~~-------------~~~~eei~-------~~~~~~~~~QL---y 130 (354)
.++.|.++ |...|+.+.++|...++.+.+ ..+++|+. +..+.|....+ |
T Consensus 18 ~i~~~~a~--------D~~sA~~~~~aG~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gy 89 (295)
T 1xg4_A 18 PLQIVGTI--------NANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCSLPLLVDADIGF 89 (295)
T ss_dssp SEEEEECS--------SHHHHHHHHHTTCSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHCCSCEEEECTTCS
T ss_pred cEEEecCc--------CHHHHHHHHHcCCCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhCCCCEEecCCccc
Confidence 45556555 458999999999876652211 13555543 33445677776 5
Q ss_pred ecCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCC
Q 018519 131 VYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDR 210 (354)
Q Consensus 131 ~~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (354)
. .+++...+.+++.+++|+.++.|.=.+. |+..+ .+.+-.. .+.......++..+.....+
T Consensus 90 g-~~~~~~~~~v~~l~~aGa~gv~iEd~~~---------------~k~cg--H~~gk~L-~p~~~~~~~I~Aa~~a~~~~ 150 (295)
T 1xg4_A 90 G-SSAFNVARTVKSMIKAGAAGLHIEDQVG---------------AKRSG--HRPNKAI-VSKEEMVDRIRAAVDAKTDP 150 (295)
T ss_dssp S-SSHHHHHHHHHHHHHHTCSEEEEECBCS---------------SCCCT--TSSSCCB-CCHHHHHHHHHHHHHHCSST
T ss_pred C-CCHHHHHHHHHHHHHcCCeEEEECCCCC---------------CcccC--CCCCCcc-CCHHHHHHHHHHHHHhccCC
Confidence 2 3778888899999999999998874331 11100 0000000 00001122344444433233
Q ss_pred ccccc---------cc-CCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCC--CCHHH
Q 018519 211 SLSWK---------GV-LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGV--RRGTD 278 (354)
Q Consensus 211 ~~~w~---------Gi-~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi--~~g~d 278 (354)
.+... |+ -..+.|+...++|||.|++ ++ .++.+.+.++.+.+ ++|++++.-. .++..
T Consensus 151 ~~~i~aRtda~~~~gl~~ai~ra~ay~eAGAd~i~~--e~-------~~~~~~~~~i~~~~--~iP~~~N~~~~g~~p~~ 219 (295)
T 1xg4_A 151 DFVIMARTDALAVEGLDAAIERAQAYVEAGAEMLFP--EA-------ITELAMYRQFADAV--QVPILANITEFGATPLF 219 (295)
T ss_dssp TSEEEEEECCHHHHCHHHHHHHHHHHHHTTCSEEEE--TT-------CCSHHHHHHHHHHH--CSCBEEECCSSSSSCCC
T ss_pred CcEEEEecHHhhhcCHHHHHHHHHHHHHcCCCEEEE--eC-------CCCHHHHHHHHHHc--CCCEEEEecccCCCCCC
Confidence 22221 22 2467788999999999999 43 45678889999988 7999876543 34443
Q ss_pred HHHHHH-cCcCEEEEcHHHHHH
Q 018519 279 VFKALA-LGASGIFIGRPVVYS 299 (354)
Q Consensus 279 v~kala-lGAd~V~igr~~l~~ 299 (354)
-.+-|+ +|.+.|++|...+.+
T Consensus 220 ~~~eL~~~G~~~v~~~~~~~~a 241 (295)
T 1xg4_A 220 TTDELRSAHVAMALYPLSAFRA 241 (295)
T ss_dssp CHHHHHHTTCSEEEESSHHHHH
T ss_pred CHHHHHHcCCCEEEEChHHHHH
Confidence 345555 999999999977664
No 146
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=97.57 E-value=0.00063 Score=61.31 Aligned_cols=72 Identities=14% Similarity=0.152 Sum_probs=55.4
Q ss_pred CHHHHH----HHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcH
Q 018519 219 TAEDAR----IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 294 (354)
Q Consensus 219 ~~~~a~----~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr 294 (354)
+++++. .+.-.|...|.+... |+ ....+.+.++++.+. ++||++-|||++++++.+++ .|||+|.+|+
T Consensus 138 ~~e~~~~~a~~a~~~g~~~VYld~s-G~-----~~~~~~i~~i~~~~~-~~Pv~vGGGI~t~e~a~~~~-~gAD~VVVGS 209 (228)
T 3vzx_A 138 NMDDIVAYARVSELLQLPIFYLEYS-GV-----LGDIEAVKKTKAVLE-TSTLFYGGGIKDAETAKQYA-EHADVIVVGN 209 (228)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECT-TS-----CCCHHHHHHHHHHCS-SSEEEEESSCCSHHHHHHHH-TTCSEEEECT
T ss_pred CHHHHHHHHHHHHHcCCCEEEecCC-CC-----cCCHHHHHHHHHhcC-CCCEEEeCCCCCHHHHHHHH-hCCCEEEECh
Confidence 445544 333456899999773 32 125788888888762 59999999999999999887 7999999999
Q ss_pred HHHH
Q 018519 295 PVVY 298 (354)
Q Consensus 295 ~~l~ 298 (354)
.+..
T Consensus 210 a~v~ 213 (228)
T 3vzx_A 210 AVYE 213 (228)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 8875
No 147
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=97.57 E-value=0.00078 Score=61.60 Aligned_cols=86 Identities=19% Similarity=0.256 Sum_probs=57.7
Q ss_pred CCHHHHHHHHHhCCCEEEEecC-CcCCCCCCc--ChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcH
Q 018519 218 LTAEDARIAVQAGAAGIIVSNH-GARQLDYVP--ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 294 (354)
Q Consensus 218 ~~~~~a~~~~~~G~d~I~vs~~-gg~~~~~~~--~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr 294 (354)
.+.+..+...+.+-.+|.+-.+ |-+...... ...+.+.++++.. ++||++.+||++++++.++.. +||+|.+|+
T Consensus 152 t~~eRi~~ia~~a~gFiY~Vs~~GvTG~~~~~~~~~~~~v~~vr~~~--~~Pv~vGfGIst~e~a~~~~~-~ADGVIVGS 228 (252)
T 3tha_A 152 TPKERVKKLVKHAKGFIYLLASIGITGTKSVEEAILQDKVKEIRSFT--NLPIFVGFGIQNNQDVKRMRK-VADGVIVGT 228 (252)
T ss_dssp SCHHHHHHHHTTCCSCEEEECCSCSSSCSHHHHHHHHHHHHHHHTTC--CSCEEEESSCCSHHHHHHHTT-TSSEEEECH
T ss_pred CcHHHHHHHHHhCCCeEEEEecCCCCCcccCCCHHHHHHHHHHHHhc--CCcEEEEcCcCCHHHHHHHHh-cCCEEEECH
Confidence 4578888888887777765333 211111111 1123455555543 799999999999999977655 699999999
Q ss_pred HHHHHHhhcCHH
Q 018519 295 PVVYSLAAEGEK 306 (354)
Q Consensus 295 ~~l~~~~~~G~~ 306 (354)
.++..+...+.+
T Consensus 229 AiVk~i~~~~~~ 240 (252)
T 3tha_A 229 SIVKCFKQGNLD 240 (252)
T ss_dssp HHHHHTTSSCHH
T ss_pred HHHHHHHhcCHH
Confidence 999876544433
No 148
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=97.55 E-value=0.0014 Score=58.56 Aligned_cols=117 Identities=16% Similarity=0.187 Sum_probs=77.3
Q ss_pred EEEeecCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhh
Q 018519 127 FQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAG 206 (354)
Q Consensus 127 ~QLy~~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (354)
+-+....+.+...+.++.+.+.|++.+.++...+.. ...++++.+.
T Consensus 19 i~v~r~~~~~~~~~~~~al~~gGv~~iel~~k~~~~----------------------------------~~~i~~l~~~ 64 (214)
T 1wbh_A 19 VPVIVVKKLEHAVPMAKALVAGGVRVLNVTLRTECA----------------------------------VDAIRAIAKE 64 (214)
T ss_dssp EEEECCSSGGGHHHHHHHHHHTTCCEEEEESCSTTH----------------------------------HHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHHcCCCEEEEeCCChhH----------------------------------HHHHHHHHHH
Confidence 334445677777888899999999999998754421 0012223332
Q ss_pred hcCCcccccccCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcC
Q 018519 207 QIDRSLSWKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG 286 (354)
Q Consensus 207 ~~~~~~~w~Gi~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalG 286 (354)
.....++-.-+++.+++..+.++|+|+|+. |+ . +.+.+ +.++.. .++++. |+.|++++.+|+.+|
T Consensus 65 ~~~~~vgagtvi~~d~~~~A~~aGAd~v~~---p~--~-----d~~v~-~~~~~~--g~~~i~--G~~t~~e~~~A~~~G 129 (214)
T 1wbh_A 65 VPEAIVGAGTVLNPQQLAEVTEAGAQFAIS---PG--L-----TEPLL-KAATEG--TIPLIP--GISTVSELMLGMDYG 129 (214)
T ss_dssp CTTSEEEEESCCSHHHHHHHHHHTCSCEEE---SS--C-----CHHHH-HHHHHS--SSCEEE--EESSHHHHHHHHHTT
T ss_pred CcCCEEeeCEEEEHHHHHHHHHcCCCEEEc---CC--C-----CHHHH-HHHHHh--CCCEEE--ecCCHHHHHHHHHCC
Confidence 221122222367889999999999999964 11 1 22322 333333 567776 499999999999999
Q ss_pred cCEEEE
Q 018519 287 ASGIFI 292 (354)
Q Consensus 287 Ad~V~i 292 (354)
||.|.+
T Consensus 130 ad~v~~ 135 (214)
T 1wbh_A 130 LKEFKF 135 (214)
T ss_dssp CCEEEE
T ss_pred CCEEEE
Confidence 999999
No 149
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=97.52 E-value=0.00023 Score=64.24 Aligned_cols=166 Identities=14% Similarity=0.129 Sum_probs=95.0
Q ss_pred HHHHHHHHcCCcEE-ecCC-------CCCCHH---HHHhhCCCceEEEEeecCChHHHHHHHHHHHHcCCCEEEEecC--
Q 018519 92 ATARAASAAGTIMT-LSSW-------STSSVE---EVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVD-- 158 (354)
Q Consensus 92 ~la~aa~~~G~~~~-~s~~-------~~~~~e---ei~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~i~vd-- 158 (354)
...+.+.+.|+.+. +-.+ -+...+ ++++.+..++-+.|.. .|++. .++.+.++|++.+.++..
T Consensus 21 ~~i~~~~~~Gad~ihldi~DG~fvp~~~~g~~~v~~lr~~~~~~~~vhlmv-~dp~~---~i~~~~~aGadgv~vh~e~~ 96 (230)
T 1tqj_A 21 EEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLTKKTLDVHLMI-VEPEK---YVEDFAKAGADIISVHVEHN 96 (230)
T ss_dssp HHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHGGGCCSEEEEEEES-SSGGG---THHHHHHHTCSEEEEECSTT
T ss_pred HHHHHHHHcCCCEEEEEEEecCCCcchhhhHHHHHHHHhhcCCcEEEEEEc-cCHHH---HHHHHHHcCCCEEEECcccc
Confidence 55667777786643 2211 112233 4444433355556665 56643 467788999999998865
Q ss_pred CCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCccccc-ccCCHHHHHHHHHhCCCEEEEe
Q 018519 159 TPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWK-GVLTAEDARIAVQAGAAGIIVS 237 (354)
Q Consensus 159 ~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~-Gi~~~~~a~~~~~~G~d~I~vs 237 (354)
.+-. .....+.+.... ..++.. ...++.+.......++|.|.+-
T Consensus 97 ~~~~----------------------------------~~~~~~~i~~~g-~~~gv~~~p~t~~e~~~~~~~~~D~v~~m 141 (230)
T 1tqj_A 97 ASPH----------------------------------LHRTLCQIRELG-KKAGAVLNPSTPLDFLEYVLPVCDLILIM 141 (230)
T ss_dssp TCTT----------------------------------HHHHHHHHHHTT-CEEEEEECTTCCGGGGTTTGGGCSEEEEE
T ss_pred cchh----------------------------------HHHHHHHHHHcC-CcEEEEEeCCCcHHHHHHHHhcCCEEEEE
Confidence 3210 001111111110 011110 1123444444555689988664
Q ss_pred c-CCcCC-CCCCcChHHHHHHHHHHhc---CCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHH
Q 018519 238 N-HGARQ-LDYVPATIMALEEVVKATQ---GRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 297 (354)
Q Consensus 238 ~-~gg~~-~~~~~~~~~~l~~i~~~~~---~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l 297 (354)
. ++|.. ....+..++.|.++++... -++||.++|||.. +.+.+....|||.+.+||.++
T Consensus 142 sv~pg~ggq~~~~~~~~~i~~lr~~~~~~~~~~~I~v~GGI~~-~~~~~~~~aGad~vvvGSai~ 205 (230)
T 1tqj_A 142 SVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEVDGGLKP-NNTWQVLEAGANAIVAGSAVF 205 (230)
T ss_dssp SSCC----CCCCGGGHHHHHHHHHHHHHHTCCCEEEEESSCCT-TTTHHHHHHTCCEEEESHHHH
T ss_pred EeccccCCccCcHHHHHHHHHHHHHHHhcCCCCcEEEECCcCH-HHHHHHHHcCCCEEEECHHHH
Confidence 3 33321 1234556777888777652 2699999999997 888888899999999999865
No 150
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=97.50 E-value=0.0004 Score=62.66 Aligned_cols=68 Identities=25% Similarity=0.266 Sum_probs=52.9
Q ss_pred HHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcH
Q 018519 224 RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 294 (354)
Q Consensus 224 ~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr 294 (354)
+.+.++|+|+|.-|..-+ ..+.++.+.+...++.++++++|-++||||+.+|+++.+.+||+.++..+
T Consensus 153 ~ia~~aGADfVKTSTGf~---~~~gAt~edv~lm~~~v~~~v~VKaaGGIrt~~~a~~~i~aGa~RiGtS~ 220 (231)
T 3ndo_A 153 RVARDAGADFVKTSTGFH---PSGGASVQAVEIMARTVGERLGVKASGGIRTAEQAAAMLDAGATRLGLSG 220 (231)
T ss_dssp HHHHHTTCSEEECCCSCC---TTCSCCHHHHHHHHHHHTTTSEEEEESSCCSHHHHHHHHHTTCSEEEESS
T ss_pred HHHHHHCcCEEEcCCCCC---CCCCCCHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHhcchhcccch
Confidence 356799999998764211 02446677777777778789999999999999999999999999665544
No 151
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=97.49 E-value=0.00023 Score=63.09 Aligned_cols=82 Identities=17% Similarity=0.216 Sum_probs=59.1
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCC-HHHHHHHHHcCcCEEEEcHHHHHH
Q 018519 221 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR-GTDVFKALALGASGIFIGRPVVYS 299 (354)
Q Consensus 221 ~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~-g~dv~kalalGAd~V~igr~~l~~ 299 (354)
.-+..+.+.|+++++++.+ ..+.+.++++.++ .-+++++|||+. +.++.+++++|||.+.+||+++.+
T Consensus 123 ~~~~~a~~~G~~G~~~~~~----------~~~~i~~lr~~~~-~~~~iv~gGI~~~g~~~~~~~~aGad~vvvGr~I~~a 191 (208)
T 2czd_A 123 RFIEVANEIEPFGVIAPGT----------RPERIGYIRDRLK-EGIKILAPGIGAQGGKAKDAVKAGADYIIVGRAIYNA 191 (208)
T ss_dssp HHHHHHHHHCCSEEECCCS----------STHHHHHHHHHSC-TTCEEEECCCCSSTTHHHHHHHHTCSEEEECHHHHTS
T ss_pred HHHHHHHHhCCcEEEECCC----------ChHHHHHHHHhCC-CCeEEEECCCCCCCCCHHHHHHcCCCEEEEChHHhcC
Confidence 3466778999999987543 2345666777664 334779999996 568999999999999999998752
Q ss_pred HhhcCHHHHHHHHHHHHHHH
Q 018519 300 LAAEGEKGVRRVLEMLREEF 319 (354)
Q Consensus 300 ~~~~G~~gv~~~l~~l~~el 319 (354)
+...+.++.+++++
T Consensus 192 ------~dp~~~~~~l~~~i 205 (208)
T 2czd_A 192 ------PNPREAAKAIYDEI 205 (208)
T ss_dssp ------SSHHHHHHHHHHHH
T ss_pred ------CCHHHHHHHHHHHH
Confidence 22445666666655
No 152
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=97.49 E-value=0.0026 Score=56.50 Aligned_cols=93 Identities=12% Similarity=0.084 Sum_probs=60.5
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcC-hHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHHH
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPA-TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 298 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l~ 298 (354)
...+..+.+.|.+-+++.- +......|.. ..+.+.++++.++.++||+++|||+ .+.+.+++..|||.+.+||++..
T Consensus 119 ~~~~~~l~~~~~~~~vl~~-a~~~~~~G~~g~~~~i~~lr~~~~~~~~i~v~GGI~-~~~~~~~~~aGad~ivvG~~I~~ 196 (216)
T 1q6o_A 119 WEQAQQWRDAGIGQVVYHR-SRDAQAAGVAWGEADITAIKRLSDMGFKVTVTGGLA-LEDLPLFKGIPIHVFIAGRSIRD 196 (216)
T ss_dssp HHHHHHHHHTTCCEEEEEC-CHHHHHTTCCCCHHHHHHHHHHHHTTCEEEEESSCC-GGGGGGGTTSCCSEEEESHHHHT
T ss_pred hhhHHHHHhcCcHHHHHHH-HHHHHhcCCCCCHHHHHHHHHhcCCCCcEEEECCcC-hhhHHHHHHcCCCEEEEeehhcC
Confidence 5566677777888777721 1110001111 3566677777665578899999998 77788889999999999998764
Q ss_pred HHhhcCHHHHHHHHHHHHHHHH
Q 018519 299 SLAAEGEKGVRRVLEMLREEFE 320 (354)
Q Consensus 299 ~~~~~G~~gv~~~l~~l~~el~ 320 (354)
+ +...+.++.++++++
T Consensus 197 a------~dp~~~~~~~~~~i~ 212 (216)
T 1q6o_A 197 A------ASPVEAARQFKRSIA 212 (216)
T ss_dssp S------SCHHHHHHHHHHHHH
T ss_pred C------CCHHHHHHHHHHHHH
Confidence 2 123345556665554
No 153
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=97.45 E-value=0.00096 Score=59.99 Aligned_cols=73 Identities=16% Similarity=0.248 Sum_probs=57.5
Q ss_pred ccCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHc-CcCEEEEcH
Q 018519 216 GVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL-GASGIFIGR 294 (354)
Q Consensus 216 Gi~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalal-GAd~V~igr 294 (354)
|+.+++++.++.+.|+|.|.+ +... .....+.|.+++..++ ++|+++.||| +...+...+++ |+++|. |+
T Consensus 116 Gv~t~~e~~~A~~~Gad~vk~--Fpa~----~~gG~~~lk~l~~~~~-~ipvvaiGGI-~~~N~~~~l~agga~~v~-gS 186 (224)
T 1vhc_A 116 GVNNPMAIEIALEMGISAVKF--FPAE----ASGGVKMIKALLGPYA-QLQIMPTGGI-GLHNIRDYLAIPNIVACG-GS 186 (224)
T ss_dssp EECSHHHHHHHHHTTCCEEEE--TTTT----TTTHHHHHHHHHTTTT-TCEEEEBSSC-CTTTHHHHHTSTTBCCEE-EC
T ss_pred ccCCHHHHHHHHHCCCCEEEE--eeCc----cccCHHHHHHHHhhCC-CCeEEEECCc-CHHHHHHHHhcCCCEEEE-Ec
Confidence 789999999999999999999 3311 1112567777776653 6999999999 56889999998 999999 87
Q ss_pred HHH
Q 018519 295 PVV 297 (354)
Q Consensus 295 ~~l 297 (354)
.+.
T Consensus 187 ~i~ 189 (224)
T 1vhc_A 187 WFV 189 (224)
T ss_dssp GGG
T ss_pred hhc
Confidence 654
No 154
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=97.40 E-value=0.00018 Score=63.09 Aligned_cols=65 Identities=14% Similarity=0.184 Sum_probs=53.3
Q ss_pred HHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHHH
Q 018519 223 ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 298 (354)
Q Consensus 223 a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l~ 298 (354)
.+...+...|+|-+- . |+.+ ..+.++++.+ ++|||+.|+|++.+|+.+|+..||++|..+++.||
T Consensus 120 ~~~i~~~~PD~iEiL-------P-Gi~p-~iI~~i~~~~--~~PiIaGGlI~~~edv~~al~aGA~aVsTs~~~LW 184 (192)
T 3kts_A 120 VALIQKVQPDCIELL-------P-GIIP-EQVQKMTQKL--HIPVIAGGLIETSEQVNQVIASGAIAVTTSNKHLW 184 (192)
T ss_dssp HHHHHHHCCSEEEEE-------C-TTCH-HHHHHHHHHH--CCCEEEESSCCSHHHHHHHHTTTEEEEEECCGGGG
T ss_pred HHHHhhcCCCEEEEC-------C-chhH-HHHHHHHHhc--CCCEEEECCcCCHHHHHHHHHcCCeEEEeCCHHHh
Confidence 345566677888662 1 2333 6788888887 89999999999999999999999999999999888
No 155
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=97.40 E-value=0.00053 Score=64.23 Aligned_cols=69 Identities=23% Similarity=0.268 Sum_probs=58.8
Q ss_pred cCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHH
Q 018519 217 VLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPV 296 (354)
Q Consensus 217 i~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~ 296 (354)
+-+.++++.+.++|+|+|.++| .+.+.+.++++.++++++|.++||| +.+.+.+....|+|.+.+|+..
T Consensus 215 v~tlee~~eA~~aGaD~I~ld~----------~~~e~l~~~v~~~~~~~~I~ASGGI-t~~~i~~~a~~GvD~isvGsli 283 (296)
T 1qap_A 215 VENLDELDDALKAGADIIMLDN----------FNTDQMREAVKRVNGQARLEVSGNV-TAETLREFAETGVDFISVGALT 283 (296)
T ss_dssp ESSHHHHHHHHHTTCSEEEESS----------CCHHHHHHHHHTTCTTCCEEECCCS-CHHHHHHHHHTTCSEEECSHHH
T ss_pred eCCHHHHHHHHHcCCCEEEECC----------CCHHHHHHHHHHhCCCCeEEEECCC-CHHHHHHHHHcCCCEEEEeHHH
Confidence 4578999999999999999966 2346677777777668999999999 9999999999999999999843
No 156
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=97.35 E-value=0.0013 Score=58.68 Aligned_cols=73 Identities=19% Similarity=0.235 Sum_probs=57.5
Q ss_pred ccCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHc-CcCEEEEcH
Q 018519 216 GVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL-GASGIFIGR 294 (354)
Q Consensus 216 Gi~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalal-GAd~V~igr 294 (354)
|+.+++++.++.++|+|.|.+ +... .....+.|.+++..++ ++|+++.||| +.+.+...+++ |+++|. |+
T Consensus 115 G~~t~~e~~~A~~~Gad~v~~--Fpa~----~~gG~~~lk~i~~~~~-~ipvvaiGGI-~~~n~~~~l~agg~~~v~-gS 185 (214)
T 1wbh_A 115 GISTVSELMLGMDYGLKEFKF--FPAE----ANGGVKALQAIAGPFS-QVRFCPTGGI-SPANYRDYLALKSVLCIG-GS 185 (214)
T ss_dssp EESSHHHHHHHHHTTCCEEEE--TTTT----TTTHHHHHHHHHTTCT-TCEEEEBSSC-CTTTHHHHHTSTTBSCEE-EG
T ss_pred ecCCHHHHHHHHHCCCCEEEE--ecCc----cccCHHHHHHHhhhCC-CCeEEEECCC-CHHHHHHHHhcCCCeEEE-ec
Confidence 789999999999999999999 4311 1112567777776553 7999999999 46889999998 899999 88
Q ss_pred HHH
Q 018519 295 PVV 297 (354)
Q Consensus 295 ~~l 297 (354)
.+.
T Consensus 186 ~i~ 188 (214)
T 1wbh_A 186 WLV 188 (214)
T ss_dssp GGS
T ss_pred ccc
Confidence 654
No 157
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=97.30 E-value=0.0018 Score=58.30 Aligned_cols=118 Identities=14% Similarity=0.177 Sum_probs=76.2
Q ss_pred EEEEeecCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHh
Q 018519 126 FFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVA 205 (354)
Q Consensus 126 ~~QLy~~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (354)
.+-+....+.+...+.++.+.+.|++.+.++...+.. ...++++.+
T Consensus 28 ii~V~r~~~~~~~~~~~~al~~gGv~~iel~~k~~~~----------------------------------~~~i~~l~~ 73 (225)
T 1mxs_A 28 ILPVITIAREEDILPLADALAAGGIRTLEVTLRSQHG----------------------------------LKAIQVLRE 73 (225)
T ss_dssp EEEEECCSCGGGHHHHHHHHHHTTCCEEEEESSSTHH----------------------------------HHHHHHHHH
T ss_pred EEEEEeCCCHHHHHHHHHHHHHCCCCEEEEecCCccH----------------------------------HHHHHHHHH
Confidence 3334444677777788888999999999998654320 001222232
Q ss_pred hhcCCcccccccCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHc
Q 018519 206 GQIDRSLSWKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL 285 (354)
Q Consensus 206 ~~~~~~~~w~Gi~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalal 285 (354)
....-.++-.-+++.+++..|.++|+|+|++ |+ . +.+ +.+.++.+ .++++. |+.|++++.+|+.+
T Consensus 74 ~~~~~~igagtvl~~d~~~~A~~aGAd~v~~---p~--~-----d~~-v~~~~~~~--g~~~i~--G~~t~~e~~~A~~~ 138 (225)
T 1mxs_A 74 QRPELCVGAGTVLDRSMFAAVEAAGAQFVVT---PG--I-----TED-ILEAGVDS--EIPLLP--GISTPSEIMMGYAL 138 (225)
T ss_dssp HCTTSEEEEECCCSHHHHHHHHHHTCSSEEC---SS--C-----CHH-HHHHHHHC--SSCEEC--EECSHHHHHHHHTT
T ss_pred hCcccEEeeCeEeeHHHHHHHHHCCCCEEEe---CC--C-----CHH-HHHHHHHh--CCCEEE--eeCCHHHHHHHHHC
Confidence 2211112222357889999999999999953 21 1 222 22333334 567665 49999999999999
Q ss_pred CcCEEEE
Q 018519 286 GASGIFI 292 (354)
Q Consensus 286 GAd~V~i 292 (354)
|||.|.+
T Consensus 139 Gad~vk~ 145 (225)
T 1mxs_A 139 GYRRFKL 145 (225)
T ss_dssp TCCEEEE
T ss_pred CCCEEEE
Confidence 9999999
No 158
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=97.29 E-value=0.00071 Score=61.25 Aligned_cols=72 Identities=19% Similarity=0.195 Sum_probs=59.8
Q ss_pred CHHHHHHHHHhCC-----CEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEc
Q 018519 219 TAEDARIAVQAGA-----AGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 293 (354)
Q Consensus 219 ~~~~a~~~~~~G~-----d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~ig 293 (354)
+++.++...++|. ..|.+... |. ....+.+.++++... ++||++-|||++++++.+++. |||+|.+|
T Consensus 147 ~~e~~~~~a~~g~~~l~~~~Vyl~~~-G~-----~~~~~~i~~i~~~~~-~~Pv~vGgGI~s~e~a~~~~~-gAd~VIVG 218 (234)
T 2f6u_A 147 DKELAASYALVGEKLFNLPIIYIEYS-GT-----YGNPELVAEVKKVLD-KARLFYGGGIDSREKAREMLR-YADTIIVG 218 (234)
T ss_dssp CHHHHHHHHHHHHHTTCCSEEEEECT-TS-----CCCHHHHHHHHHHCS-SSEEEEESCCCSHHHHHHHHH-HSSEEEEC
T ss_pred CHHHHHHHHHhhhhhcCCCEEEEeCC-CC-----cchHHHHHHHHHhCC-CCCEEEEecCCCHHHHHHHHh-CCCEEEEC
Confidence 6788888888887 88887653 32 446788888888652 689999999999999999999 99999999
Q ss_pred HHHHH
Q 018519 294 RPVVY 298 (354)
Q Consensus 294 r~~l~ 298 (354)
+.++.
T Consensus 219 Sa~v~ 223 (234)
T 2f6u_A 219 NVIYE 223 (234)
T ss_dssp HHHHH
T ss_pred hHHHh
Confidence 98875
No 159
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=97.25 E-value=0.0022 Score=58.40 Aligned_cols=161 Identities=16% Similarity=0.237 Sum_probs=90.3
Q ss_pred HHHHHhhCC-CceEEEEeecCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcC
Q 018519 114 VEEVASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKM 192 (354)
Q Consensus 114 ~eei~~~~~-~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~ 192 (354)
++++++..| .+.-+.|.. .|++. .++.+.++|++.+-++......-.|
T Consensus 77 v~~lr~~~p~~~ldvHLmv-~~p~~---~i~~~~~aGAd~itvH~Ea~~~~~~--------------------------- 125 (246)
T 3inp_A 77 LKALRDYGITAGMDVHLMV-KPVDA---LIESFAKAGATSIVFHPEASEHIDR--------------------------- 125 (246)
T ss_dssp HHHHHHHTCCSCEEEEEEC-SSCHH---HHHHHHHHTCSEEEECGGGCSCHHH---------------------------
T ss_pred HHHHHHhCCCCeEEEEEee-CCHHH---HHHHHHHcCCCEEEEccccchhHHH---------------------------
Confidence 456666664 556677764 56654 4677789999999888654311000
Q ss_pred cccchhhHHHHHhhhcCCcccccccCCHHHHHHHHHhCCCEEEEec-CCcC-CCCCCcChHHHHHHHHHHhc---CCccE
Q 018519 193 DEANDSGLAAYVAGQIDRSLSWKGVLTAEDARIAVQAGAAGIIVSN-HGAR-QLDYVPATIMALEEVVKATQ---GRIPV 267 (354)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~w~Gi~~~~~a~~~~~~G~d~I~vs~-~gg~-~~~~~~~~~~~l~~i~~~~~---~~i~v 267 (354)
.+..+.+.-....+....-...+.++...+ .+|.|.+-. +.|. ...+.+.+++-+.++++..+ .+++|
T Consensus 126 ------~i~~ir~~G~k~Gvalnp~Tp~e~l~~~l~-~vD~VlvMsV~PGfgGQ~fi~~~l~KI~~lr~~~~~~~~~~~I 198 (246)
T 3inp_A 126 ------SLQLIKSFGIQAGLALNPATGIDCLKYVES-NIDRVLIMSVNPGFGGQKFIPAMLDKAKEISKWISSTDRDILL 198 (246)
T ss_dssp ------HHHHHHTTTSEEEEEECTTCCSGGGTTTGG-GCSEEEEECSCTTC--CCCCTTHHHHHHHHHHHHHHHTSCCEE
T ss_pred ------HHHHHHHcCCeEEEEecCCCCHHHHHHHHh-cCCEEEEeeecCCCCCcccchHHHHHHHHHHHHHHhcCCCeeE
Confidence 011111100000011110012222222222 589887622 3221 12345777777877777653 26899
Q ss_pred EEcCCCCCHHHHHHHHHcCcCEEEEcHHHHHHHhhcCHHHHHHHHHHHHHHH
Q 018519 268 FLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEF 319 (354)
Q Consensus 268 i~~GGi~~g~dv~kalalGAd~V~igr~~l~~~~~~G~~gv~~~l~~l~~el 319 (354)
.++|||. .+.+.++..+|||.+.+||++.. .+..++.++.|++.+
T Consensus 199 ~VDGGI~-~~ti~~~~~aGAD~~V~GSaIf~------a~dp~~~i~~l~~~i 243 (246)
T 3inp_A 199 EIDGGVN-PYNIAEIAVCGVNAFVAGSAIFN------SDSYKQTIDKMRDEL 243 (246)
T ss_dssp EEESSCC-TTTHHHHHTTTCCEEEESHHHHT------SSCHHHHHHHHHHHH
T ss_pred EEECCcC-HHHHHHHHHcCCCEEEEehHHhC------CCCHHHHHHHHHHHH
Confidence 9999999 67788888999999999996542 122334556665554
No 160
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=97.22 E-value=0.00045 Score=64.00 Aligned_cols=71 Identities=17% Similarity=0.209 Sum_probs=57.1
Q ss_pred ccCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhc---CCccEEEcCCCCCHHHHHHHHHcCcCEEEE
Q 018519 216 GVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQ---GRIPVFLDGGVRRGTDVFKALALGASGIFI 292 (354)
Q Consensus 216 Gi~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~---~~i~vi~~GGi~~g~dv~kalalGAd~V~i 292 (354)
.+.+.++++.+.++|+|+|.+++-+ .+.+.++++.++ .+++|.++||| +.+.+.+.+..|||.+.+
T Consensus 188 ev~tlee~~~A~~aGaD~I~ld~~~----------~~~l~~~v~~l~~~~~~~~i~AsGGI-~~~ni~~~~~aGaD~i~v 256 (273)
T 2b7n_A 188 ECESFEEAKNAMNAGADIVMCDNLS----------VLETKEIAAYRDAHYPFVLLEASGNI-SLESINAYAKSGVDAISV 256 (273)
T ss_dssp EESSHHHHHHHHHHTCSEEEEETCC----------HHHHHHHHHHHHHHCTTCEEEEESSC-CTTTHHHHHTTTCSEEEC
T ss_pred EcCCHHHHHHHHHcCCCEEEECCCC----------HHHHHHHHHHhhccCCCcEEEEECCC-CHHHHHHHHHcCCcEEEE
Confidence 4568899999999999999997621 355555555553 24999999999 899999999999999999
Q ss_pred cHHHH
Q 018519 293 GRPVV 297 (354)
Q Consensus 293 gr~~l 297 (354)
|+.+.
T Consensus 257 Gs~i~ 261 (273)
T 2b7n_A 257 GALIH 261 (273)
T ss_dssp THHHH
T ss_pred cHHhc
Confidence 98743
No 161
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=97.20 E-value=0.0077 Score=53.90 Aligned_cols=186 Identities=13% Similarity=0.133 Sum_probs=113.1
Q ss_pred hHHHHHHHHHcCCcEEecCC------C---CCCH----HHHHhhCCCceEEEEeecCChHHHHHHHHHHHHcCCCEEEEe
Q 018519 90 EYATARAASAAGTIMTLSSW------S---TSSV----EEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALT 156 (354)
Q Consensus 90 e~~la~aa~~~G~~~~~s~~------~---~~~~----eei~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~i~ 156 (354)
++.-.+.+.+.|..-.+++. + .... .++++..+++..+|+.. .|.+.+.+..++..+.+ +-++|-
T Consensus 9 n~~ei~~~~~~g~i~GVTTNPsli~k~~~~g~~~~~~~~ei~~~v~G~Vs~EV~a-~d~e~mi~eA~~L~~~~-~nv~IK 86 (223)
T 3s1x_A 9 NIDEIRTGVNWGIVDGVTTNPTLISKEAVNGKKYGDIIREILKIVDGPVSVEVVS-TKYEGMVEEARKIHGLG-DNAVVK 86 (223)
T ss_dssp CHHHHHHHHHHTCCCEEECCHHHHHHHSCTTCCHHHHHHHHHHHCSSCEEEECCC-CSHHHHHHHHHHHHHTC-TTEEEE
T ss_pred CHHHHHHHHhcCCcccccCCHHHHHhhhccCCCHHHHHHHHHHhCCCCEEEEEcc-CCHHHHHHHHHHHHHhC-CCEEEE
Confidence 44555556666654444432 1 1233 34555567888899864 67777766666666664 345554
Q ss_pred cCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCcccccccCCHHHHHHHHHhCCCEEEE
Q 018519 157 VDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKGVLTAEDARIAVQAGAAGIIV 236 (354)
Q Consensus 157 vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~Gi~~~~~a~~~~~~G~d~I~v 236 (354)
+ |.. ++| ...++.+.+. . -.....-|.+.+.|..|.++|++.|..
T Consensus 87 I--P~T-------------~eG------------------l~A~~~L~~~-G-I~vn~TlifS~~QA~~Aa~AGa~yISP 131 (223)
T 3s1x_A 87 I--PMT-------------EDG------------------LRAIKTLSSE-H-INTNCTLVFNPIQALLAAKAGVTYVSP 131 (223)
T ss_dssp E--ESS-------------HHH------------------HHHHHHHHHT-T-CCEEEEEECSHHHHHHHHHTTCSEEEE
T ss_pred e--CCC-------------HHH------------------HHHHHHHHHC-C-CcEEEEEeCCHHHHHHHHHcCCeEEEe
Confidence 4 221 000 1112222221 1 112222568999999999999998755
Q ss_pred ecCCcCCCCCCcChHHHHHHHHHHhc---CCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHHHHHhhcC--HHHHHHH
Q 018519 237 SNHGARQLDYVPATIMALEEVVKATQ---GRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEG--EKGVRRV 311 (354)
Q Consensus 237 s~~gg~~~~~~~~~~~~l~~i~~~~~---~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l~~~~~~G--~~gv~~~ 311 (354)
.-||-.|++.+.+..+.++.+..+ .+..|++.+ +|+..++.++..+|||.+-+.-.++..+...- ..|++++
T Consensus 132 --fvgRi~d~g~dG~~~v~~i~~~~~~~~~~T~IlaAS-~Rn~~~v~~aa~~G~d~~Tip~~vl~~l~~hpltd~~~~~F 208 (223)
T 3s1x_A 132 --FVGRLDDIGEDGMQIIDMIRTIFNNYIIKTQILVAS-IRNPIHVLRSAVIGADVVTVPFNVLKSLMKHPKTDEGLAKF 208 (223)
T ss_dssp --BSHHHHHTTSCTHHHHHHHHHHHHHTTCCSEEEEBS-CCSHHHHHHHHHHTCSEEEECHHHHHHTTCCHHHHHHHHHH
T ss_pred --ecchHhhcCCCHHHHHHHHHHHHHHcCCCCEEEEEe-CCCHHHHHHHHHcCCCEEEeCHHHHHHHHcCCcHHHHHHHH
Confidence 556655667777777777776542 356666665 99999999999999999999987777654321 2445444
Q ss_pred HHHH
Q 018519 312 LEML 315 (354)
Q Consensus 312 l~~l 315 (354)
.+.|
T Consensus 209 ~~Dw 212 (223)
T 3s1x_A 209 LEDW 212 (223)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4444
No 162
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=97.18 E-value=0.0009 Score=60.80 Aligned_cols=73 Identities=15% Similarity=0.189 Sum_probs=58.5
Q ss_pred CCHHHHHHHHHhCC----CEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEc
Q 018519 218 LTAEDARIAVQAGA----AGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 293 (354)
Q Consensus 218 ~~~~~a~~~~~~G~----d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~ig 293 (354)
.+++.++...++|. -.|.+... |. ....+.+.++++... ++||++-|||++++++.+++. |||+|.+|
T Consensus 139 ~~~~~~~~~a~~g~~~~~~~VYl~s~-G~-----~~~~~~i~~i~~~~~-~~Pv~vGgGI~t~e~a~~~~~-gAd~VIVG 210 (240)
T 1viz_A 139 LNMDDIVAYARVSELLQLPIFYLEYS-GV-----LGDIEAVKKTKAVLE-TSTLFYGGGIKDAETAKQYAE-HADVIVVG 210 (240)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECT-TS-----CCCHHHHHHHHHTCS-SSEEEEESSCCSHHHHHHHHT-TCSEEEEC
T ss_pred CCHHHHHHHHHhCcccCCCEEEEeCC-Cc-----cChHHHHHHHHHhcC-CCCEEEEeccCCHHHHHHHHh-CCCEEEEC
Confidence 35788888888774 77877552 32 446778888887642 689999999999999999888 99999999
Q ss_pred HHHHH
Q 018519 294 RPVVY 298 (354)
Q Consensus 294 r~~l~ 298 (354)
+.++.
T Consensus 211 Sa~v~ 215 (240)
T 1viz_A 211 NAVYE 215 (240)
T ss_dssp THHHH
T ss_pred hHHHh
Confidence 98875
No 163
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=97.17 E-value=0.00076 Score=60.30 Aligned_cols=88 Identities=20% Similarity=0.186 Sum_probs=63.5
Q ss_pred CHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCC-HHHHHHHHHcCcCEEEEcHHHH
Q 018519 219 TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR-GTDVFKALALGASGIFIGRPVV 297 (354)
Q Consensus 219 ~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~-g~dv~kalalGAd~V~igr~~l 297 (354)
..+-++.+.++|+|++++|.+ ..+.+..+++.++ + .+++++||+- +.+..+++..|||.+.+|||+.
T Consensus 117 v~~~a~~a~~~G~~GvV~sat----------~~~e~~~ir~~~~-~-f~~v~pGI~~~g~~~~~a~~~Gad~iVvGr~I~ 184 (215)
T 3ve9_A 117 YPYLREVARRVNPKGFVAPAT----------RPSMISRVKGDFP-D-KLVISPGVGTQGAKPGIALCHGADYEIVGRSVY 184 (215)
T ss_dssp HHHHHHHHHHHCCSEEECCTT----------SHHHHHHHHHHCT-T-SEEEECCTTSTTCCTTHHHHTTCSEEEECHHHH
T ss_pred HHHHHHHHHHcCCCceeeCCC----------CHHHHHHHHHhCC-C-cEEEcCCCCcCcCCHHHHHHcCCCEEEeCHHHc
Confidence 456778889999999987432 1345677777775 4 6899999984 3367788899999999999987
Q ss_pred HHHhhcCHHHHHHHHHHHHHHHHHHHH
Q 018519 298 YSLAAEGEKGVRRVLEMLREEFELAMA 324 (354)
Q Consensus 298 ~~~~~~G~~gv~~~l~~l~~el~~~m~ 324 (354)
.+ +.....++.+++|++....
T Consensus 185 ~a------~dp~~a~~~i~~~i~~~~~ 205 (215)
T 3ve9_A 185 QS------ADPVRKLEEIVRSQEEVLS 205 (215)
T ss_dssp TS------SSHHHHHHHHHHHHHHHC-
T ss_pred CC------CCHHHHHHHHHHHHHHHHH
Confidence 53 2334566777777766544
No 164
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=97.15 E-value=0.0017 Score=60.53 Aligned_cols=70 Identities=27% Similarity=0.355 Sum_probs=56.8
Q ss_pred ccCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHH
Q 018519 216 GVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRP 295 (354)
Q Consensus 216 Gi~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~ 295 (354)
.+.+.++++.+.++|+|.|.++|- ..+.+.++.+.+++++|+.++|||. .+.+.+..+.|+|.+.+|+.
T Consensus 202 ev~t~eea~eA~~aGaD~I~ld~~----------~~~~~k~av~~v~~~ipi~AsGGIt-~eni~~~a~tGvD~IsVgs~ 270 (286)
T 1x1o_A 202 EVRSLEELEEALEAGADLILLDNF----------PLEALREAVRRVGGRVPLEASGNMT-LERAKAAAEAGVDYVSVGAL 270 (286)
T ss_dssp EESSHHHHHHHHHHTCSEEEEESC----------CHHHHHHHHHHHTTSSCEEEESSCC-HHHHHHHHHHTCSEEECTHH
T ss_pred EeCCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhCCCCeEEEEcCCC-HHHHHHHHHcCCCEEEEcHH
Confidence 346899999999999999999662 2344566666665679999999994 88888888899999999985
Q ss_pred H
Q 018519 296 V 296 (354)
Q Consensus 296 ~ 296 (354)
+
T Consensus 271 ~ 271 (286)
T 1x1o_A 271 T 271 (286)
T ss_dssp H
T ss_pred H
Confidence 4
No 165
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=97.06 E-value=0.0013 Score=63.97 Aligned_cols=73 Identities=26% Similarity=0.398 Sum_probs=53.5
Q ss_pred CHHHHHHHHHhCCCEEEEecCCcCCCCCCc-ChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcH
Q 018519 219 TAEDARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 294 (354)
Q Consensus 219 ~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr 294 (354)
..+.+..+.++|+|+|.+++....+...++ .++..+.++++.. ++||++ ||+.+++|+.+++.+|||+|.+|+
T Consensus 167 ~~e~a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~~--~~pvi~-ggi~t~e~a~~~~~~Gad~i~vg~ 240 (393)
T 2qr6_A 167 VREIAPIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGSL--DVPVIA-GGVNDYTTALHMMRTGAVGIIVGG 240 (393)
T ss_dssp HHHHHHHHHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHHC--SSCEEE-ECCCSHHHHHHHHTTTCSEEEESC
T ss_pred HHHHHHHHHHCCCCEEEEeCCccccccCCCcccHHHHHHHHHhc--CCCEEE-CCcCCHHHHHHHHHcCCCEEEECC
Confidence 456677888999999998643211212222 1566677888876 799999 999999999999999999999986
No 166
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=97.05 E-value=0.0014 Score=59.38 Aligned_cols=72 Identities=21% Similarity=0.174 Sum_probs=51.1
Q ss_pred ccCCHHH----HHHHHHhCCCEEEEecCCcCCCCC-CcChHHHHHH--HHHHhcCCccEEEcCCCCCHHHHHHHHHcCcC
Q 018519 216 GVLTAED----ARIAVQAGAAGIIVSNHGARQLDY-VPATIMALEE--VVKATQGRIPVFLDGGVRRGTDVFKALALGAS 288 (354)
Q Consensus 216 Gi~~~~~----a~~~~~~G~d~I~vs~~gg~~~~~-~~~~~~~l~~--i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd 288 (354)
+.++.+. ++.+.++|+|+|..|... .. +.++.+.+.. .++.++ +||-++|||++.+|+++.+.+||+
T Consensus 143 ~~L~~e~i~~a~ria~eaGADfVKTsTG~----~~~~gAt~~dv~l~~m~~~v~--v~VKaaGGirt~~~al~~i~aGa~ 216 (234)
T 1n7k_A 143 PLWDDKTLSLLVDSSRRAGADIVKTSTGV----YTKGGDPVTVFRLASLAKPLG--MGVKASGGIRSGIDAVLAVGAGAD 216 (234)
T ss_dssp GGSCHHHHHHHHHHHHHTTCSEEESCCSS----SCCCCSHHHHHHHHHHHGGGT--CEEEEESSCCSHHHHHHHHHTTCS
T ss_pred cCCCHHHHHHHHHHHHHhCCCEEEeCCCC----CCCCCCCHHHHHHHHHHHHHC--CCEEEecCCCCHHHHHHHHHcCcc
Confidence 4445443 346689999999976421 11 3456555544 566664 999999999999999999999999
Q ss_pred EEEEc
Q 018519 289 GIFIG 293 (354)
Q Consensus 289 ~V~ig 293 (354)
.++..
T Consensus 217 RiG~S 221 (234)
T 1n7k_A 217 IIGTS 221 (234)
T ss_dssp EEEET
T ss_pred ccchH
Confidence 44443
No 167
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis}
Probab=97.02 E-value=0.011 Score=52.39 Aligned_cols=185 Identities=16% Similarity=0.105 Sum_probs=115.7
Q ss_pred hHHHHHHHHHcCCcEEecCC------C-CCCHH----HHHhhCCCceEEEEeecCChHHHHHHHHHHHHcCCCEEEEecC
Q 018519 90 EYATARAASAAGTIMTLSSW------S-TSSVE----EVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVD 158 (354)
Q Consensus 90 e~~la~aa~~~G~~~~~s~~------~-~~~~e----ei~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~i~vd 158 (354)
++.-.+.+.+.|..-.+++. + ....+ +|++..+++..+|+. ..|.+.+.+..++..+.+ +.++|-+
T Consensus 9 n~~ei~~~~~~g~i~GVTTNPsli~k~~g~~~~~~~~eI~~~v~G~Vs~EV~-a~d~e~mi~ea~~l~~~~-~nv~IKI- 85 (212)
T 3r8r_A 9 NIDEIREANELGILAGVTTNPSLVAKEANVSFHDRLREITDVVKGSVSAEVI-SLKAEEMIEEGKELAKIA-PNITVKI- 85 (212)
T ss_dssp CHHHHHHHHHTTCEEEEECCHHHHHTSCSSCHHHHHHHHHHHCCSCEEEECC-CSSHHHHHHHHHHHHTTC-TTEEEEE-
T ss_pred CHHHHHHHHhcCCcccccCCHHHHHHccCCCHHHHHHHHHHhcCCCEEEEEe-cCCHHHHHHHHHHHHHhC-CCEEEEe-
Confidence 55666777778876666553 1 12333 455556788889985 467777766666655554 3445544
Q ss_pred CCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCcccccccCCHHHHHHHHHhCCCEEEEec
Q 018519 159 TPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKGVLTAEDARIAVQAGAAGIIVSN 238 (354)
Q Consensus 159 ~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~Gi~~~~~a~~~~~~G~d~I~vs~ 238 (354)
|.. ++| ...++.+.+. . -.....-|.+...|..|.++|++.|..
T Consensus 86 -P~T-------------~eG------------------l~A~~~L~~~-G-I~vn~TlifS~~Qa~~Aa~AGa~yISP-- 129 (212)
T 3r8r_A 86 -PMT-------------SDG------------------LKAVRALTDL-G-IKTNVTLIFNANQALLAARAGATYVSP-- 129 (212)
T ss_dssp -ESS-------------HHH------------------HHHHHHHHHT-T-CCEEEEEECSHHHHHHHHHHTCSEEEE--
T ss_pred -CCC-------------HHH------------------HHHHHHHHHC-C-CcEEEEEeCCHHHHHHHHHcCCeEEEe--
Confidence 221 000 1112222221 1 112222568999999999999998755
Q ss_pred CCcCCCCCCcChHHHHHHHHHHhc---CCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHHHHHhhcC--HHHHHHHHH
Q 018519 239 HGARQLDYVPATIMALEEVVKATQ---GRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEG--EKGVRRVLE 313 (354)
Q Consensus 239 ~gg~~~~~~~~~~~~l~~i~~~~~---~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l~~~~~~G--~~gv~~~l~ 313 (354)
.-||-.|++.+.+..+.++.+..+ .+..|++.+ +|+..++.++..+|||.+-+.-.++..+...- ..|++++.+
T Consensus 130 fvgRi~d~~~dG~~~v~~i~~~~~~~~~~t~ilaAS-~R~~~~v~~~a~~G~d~~Tip~~vl~~l~~hpltd~~~~~F~~ 208 (212)
T 3r8r_A 130 FLGRLDDIGHNGLDLISEVKQIFDIHGLDTQIIAAS-IRHPQHVTEAALRGAHIGTMPLKVIHALTKHPLTDKGIEQFLA 208 (212)
T ss_dssp BHHHHHHTTSCHHHHHHHHHHHHHHHTCCCEEEEBS-CCSHHHHHHHHHTTCSEEEECHHHHHHHTCCHHHHHHHHHHHH
T ss_pred ccchhhhcCCChHHHHHHHHHHHHHcCCCCEEEEec-CCCHHHHHHHHHcCCCEEEcCHHHHHHHHcCCcHHHHHHHHHH
Confidence 545655667777777777776552 356666666 99999999999999999999877776654321 245555444
Q ss_pred H
Q 018519 314 M 314 (354)
Q Consensus 314 ~ 314 (354)
.
T Consensus 209 D 209 (212)
T 3r8r_A 209 D 209 (212)
T ss_dssp H
T ss_pred H
Confidence 3
No 168
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=97.01 E-value=0.0007 Score=63.56 Aligned_cols=70 Identities=17% Similarity=0.151 Sum_probs=56.5
Q ss_pred ccCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhc---CCccEEEcCCCCCHHHHHHHHHcCcCEEEE
Q 018519 216 GVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQ---GRIPVFLDGGVRRGTDVFKALALGASGIFI 292 (354)
Q Consensus 216 Gi~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~---~~i~vi~~GGi~~g~dv~kalalGAd~V~i 292 (354)
.+.+.++++.+.++|+|+|-+++.+ .+.+.++++.++ .+++|.++||| +.+.+.+.+..|||.+.+
T Consensus 203 ev~tlee~~~A~~aGaD~I~ld~~~----------~~~l~~~v~~l~~~~~~~~I~ASGGI-t~~ni~~~~~aGaD~i~v 271 (299)
T 2jbm_A 203 ECSSLQEAVQAAEAGADLVLLDNFK----------PEELHPTATVLKAQFPSVAVEASGGI-TLDNLPQFCGPHIDVISM 271 (299)
T ss_dssp EESSHHHHHHHHHTTCSEEEEESCC----------HHHHHHHHHHHHHHCTTSEEEEESSC-CTTTHHHHCCTTCCEEEC
T ss_pred ecCCHHHHHHHHHcCCCEEEECCCC----------HHHHHHHHHHhhccCCCeeEEEECCC-CHHHHHHHHHCCCCEEEE
Confidence 4568899999999999999997722 355555555553 24999999999 899998888899999999
Q ss_pred cHHH
Q 018519 293 GRPV 296 (354)
Q Consensus 293 gr~~ 296 (354)
|+.+
T Consensus 272 Gs~i 275 (299)
T 2jbm_A 272 GMLT 275 (299)
T ss_dssp THHH
T ss_pred Chhh
Confidence 9954
No 169
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=96.97 E-value=0.0024 Score=57.38 Aligned_cols=78 Identities=23% Similarity=0.171 Sum_probs=53.3
Q ss_pred ccCCHHHH----HHHHHhCCCEEEEecCCc-----C-CCCCCcChHHHHHHHHHH---hcCCccEEEcCCCCCHHHHHHH
Q 018519 216 GVLTAEDA----RIAVQAGAAGIIVSNHGA-----R-QLDYVPATIMALEEVVKA---TQGRIPVFLDGGVRRGTDVFKA 282 (354)
Q Consensus 216 Gi~~~~~a----~~~~~~G~d~I~vs~~gg-----~-~~~~~~~~~~~l~~i~~~---~~~~i~vi~~GGi~~g~dv~ka 282 (354)
+-++.+.. +.+.++|+|+|..|..-+ . ..+.+.++.+.+.-+++. ++++++|-++||||+.+|+++.
T Consensus 123 ~~Lt~eei~~a~~ia~eaGADfVKTSTGf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~g~~v~vKaaGGirt~~~al~~ 202 (226)
T 1vcv_A 123 PYLRDEERYTLYDIIAEAGAHFIKSSTGFAEEAYAARQGNPVHSTPERAAAIARYIKEKGYRLGVKMAGGIRTREQAKAI 202 (226)
T ss_dssp GGCCHHHHHHHHHHHHHHTCSEEECCCSCCCHHHHHHTTCCSSCCHHHHHHHHHHHHHHTCCCEEEEESSCCSHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHcCCCEEEeCCCCCccccccccCCCCCCCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHH
Confidence 44555543 466899999999864211 0 111244455544444444 7778999999999999999999
Q ss_pred HHc---CcC----EEEEc
Q 018519 283 LAL---GAS----GIFIG 293 (354)
Q Consensus 283 lal---GAd----~V~ig 293 (354)
+.+ ||+ .++..
T Consensus 203 i~a~~~Ga~~~~fRiGtS 220 (226)
T 1vcv_A 203 VDAIGWGEDPARVRLGTS 220 (226)
T ss_dssp HHHHCSCSCTTTEEEEES
T ss_pred HHHHHCCCCcCCceEecC
Confidence 999 999 66554
No 170
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=96.96 E-value=0.071 Score=49.46 Aligned_cols=107 Identities=18% Similarity=0.327 Sum_probs=78.1
Q ss_pred CCHHHHHHHH-HhCCCEEEEec---CCcCCCCCCcC--hHHHHHHHHHHhcCCccEEEcCCCCCHHH-HHHHHHcCcCEE
Q 018519 218 LTAEDARIAV-QAGAAGIIVSN---HGARQLDYVPA--TIMALEEVVKATQGRIPVFLDGGVRRGTD-VFKALALGASGI 290 (354)
Q Consensus 218 ~~~~~a~~~~-~~G~d~I~vs~---~gg~~~~~~~~--~~~~l~~i~~~~~~~i~vi~~GGi~~g~d-v~kalalGAd~V 290 (354)
.+|++|+... +.|+|.+-++- ||-+. +.| .++.|.+|++.+ ++|++.=||=..+.+ +.|++.+|..-|
T Consensus 155 T~Peea~~Fv~~TgvD~LAvaiGt~HG~Y~---~~p~Ld~~~L~~I~~~~--~vpLVlHGgSG~~~e~i~~ai~~Gv~Ki 229 (286)
T 1gvf_A 155 TDPQEAKRFVELTGVDSLAVAIGTAHGLYS---KTPKIDFQRLAEIREVV--DVPLVLHGASDVPDEFVRRTIELGVTKV 229 (286)
T ss_dssp CCHHHHHHHHHHHCCSEEEECSSCCSSCCS---SCCCCCHHHHHHHHHHC--CSCEEECCCTTCCHHHHHHHHHTTEEEE
T ss_pred CCHHHHHHHHHHHCCCEEEeecCccccCcC---CCCccCHHHHHHHHHhc--CCCEEEECCCCCCHHHHHHHHHCCCeEE
Confidence 6899999887 79999999864 56442 333 468899999988 799999997776655 678999999999
Q ss_pred EEcHHHHHHHhh-------cC-----HH-HHHHHHHHHHHHHHHHHHHhCCC
Q 018519 291 FIGRPVVYSLAA-------EG-----EK-GVRRVLEMLREEFELAMALSGCR 329 (354)
Q Consensus 291 ~igr~~l~~~~~-------~G-----~~-gv~~~l~~l~~el~~~m~~~G~~ 329 (354)
-+++-+-++... .. +. -+....+.+++.++..|..+|..
T Consensus 230 Ni~Tdl~~a~~~~~r~~~~~~~~~~dpr~~~~~~~~a~~~~v~~~~~~~gs~ 281 (286)
T 1gvf_A 230 NVATELKIAFAGAVKAWFAENPQGNDPRYYMRVGMDAMKEVVRNKINVCGSA 281 (286)
T ss_dssp EECHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred EEChHHHHHHHHHHHHHHHhCcccCChHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999976554321 11 11 12334467778888888888764
No 171
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=96.96 E-value=0.0013 Score=59.83 Aligned_cols=78 Identities=15% Similarity=0.158 Sum_probs=57.7
Q ss_pred ccCCHHHHHHHHHhCCCEEEEecC--CcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEc
Q 018519 216 GVLTAEDARIAVQAGAAGIIVSNH--GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 293 (354)
Q Consensus 216 Gi~~~~~a~~~~~~G~d~I~vs~~--gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~ig 293 (354)
++...+.++.+.+.|+..|++..- =|+ ..-+.++.+..+.+.+. ++|||++||+++.+|+.+ +..++++|.+|
T Consensus 150 ~~~~~~~~~~~~~~g~~eil~t~Id~DGt---~~G~d~~l~~~l~~~~~-~ipviasGGv~~~~Dl~~-l~~~~~gvivg 224 (243)
T 4gj1_A 150 DKKLMEVLDFYSNKGLKHILCTDISKDGT---MQGVNVRLYKLIHEIFP-NICIQASGGVASLKDLEN-LKGICSGVIVG 224 (243)
T ss_dssp CCBHHHHHHHHHTTTCCEEEEEETTC--------CCCHHHHHHHHHHCT-TSEEEEESCCCSHHHHHH-TTTTCSEEEEC
T ss_pred cchHHHHHHHHhhcCCcEEEeeeeccccc---ccCCCHHHHHHHHHhcC-CCCEEEEcCCCCHHHHHH-HHccCchhehH
Confidence 344567788899999999998431 111 12346778888887652 699999999999999865 56679999999
Q ss_pred HHHHH
Q 018519 294 RPVVY 298 (354)
Q Consensus 294 r~~l~ 298 (354)
+++.+
T Consensus 225 ~Al~~ 229 (243)
T 4gj1_A 225 KALLD 229 (243)
T ss_dssp HHHHT
T ss_pred HHHHC
Confidence 98765
No 172
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=96.93 E-value=0.0029 Score=56.78 Aligned_cols=88 Identities=14% Similarity=0.155 Sum_probs=64.0
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCH-HHHHHHHHcCcCEEEEcHHHHH
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG-TDVFKALALGASGIFIGRPVVY 298 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g-~dv~kalalGAd~V~igr~~l~ 298 (354)
.+.++.+.++|+|++++|.+ ..+.+..+++.++ + -+++..||+-. .+..+++..|||.+.+|||+..
T Consensus 125 ~~~a~~a~~~g~~GvV~sat----------~p~e~~~ir~~~~-~-~~~vtPGI~~~g~tp~~a~~~Gad~iVVGR~I~~ 192 (222)
T 4dbe_A 125 DYIKNVIREISPKGIVVGGT----------KLDHITQYRRDFE-K-MTIVSPGMGSQGGSYGDAVCAGADYEIIGRSIYN 192 (222)
T ss_dssp HHHHHHHHHHCCSEEEECTT----------CHHHHHHHHHHCT-T-CEEEECCBSTTSBCTTHHHHHTCSEEEECHHHHT
T ss_pred HHHHHHHHHhCCCEEEECCC----------CHHHHHHHHHhCC-C-CEEEcCCcccCccCHHHHHHcCCCEEEECHHhcC
Confidence 67888899999999988432 1245677777775 4 68889999853 2566888899999999999885
Q ss_pred HHhhcCHHHHHHHHHHHHHHHHHHHHH
Q 018519 299 SLAAEGEKGVRRVLEMLREEFELAMAL 325 (354)
Q Consensus 299 ~~~~~G~~gv~~~l~~l~~el~~~m~~ 325 (354)
+ +......+.++++++.....
T Consensus 193 A------~dP~~aa~~i~~~i~~~~~~ 213 (222)
T 4dbe_A 193 A------GNPLTALRTINKIIEDKVMK 213 (222)
T ss_dssp S------SSHHHHHHHHHHHHHHHHHH
T ss_pred C------CCHHHHHHHHHHHHHHHHHH
Confidence 3 33345666777777765544
No 173
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=96.86 E-value=0.0061 Score=54.82 Aligned_cols=94 Identities=12% Similarity=0.179 Sum_probs=65.3
Q ss_pred CHHHHHHHHHhC-CCEEEEec-CCcC-CCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHH
Q 018519 219 TAEDARIAVQAG-AAGIIVSN-HGAR-QLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRP 295 (354)
Q Consensus 219 ~~~~a~~~~~~G-~d~I~vs~-~gg~-~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~ 295 (354)
..+..+...+.| +|.|.+-. |.|. +....+..++-+.++++..+ +++|.++|||. .+.+.++.++|||.+.+||.
T Consensus 126 p~~~~~~~l~~g~~D~VlvmsV~pGf~gq~f~~~~l~ki~~lr~~~~-~~~I~VdGGI~-~~ti~~~~~aGAd~~V~Gsa 203 (227)
T 1tqx_A 126 DVQKLVPILDTNLINTVLVMTVEPGFGGQSFMHDMMGKVSFLRKKYK-NLNIQVDGGLN-IETTEISASHGANIIVAGTS 203 (227)
T ss_dssp CGGGGHHHHTTTCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCT-TCEEEEESSCC-HHHHHHHHHHTCCEEEESHH
T ss_pred cHHHHHHHhhcCCcCEEEEeeeccCCCCcccchHHHHHHHHHHHhcc-CCeEEEECCCC-HHHHHHHHHcCCCEEEEeHH
Confidence 345566666666 99996632 3221 22346677888888888764 78999999997 67888889999999999987
Q ss_pred HHHHHhhcCHHHHHHHHHHHHHHHH
Q 018519 296 VVYSLAAEGEKGVRRVLEMLREEFE 320 (354)
Q Consensus 296 ~l~~~~~~G~~gv~~~l~~l~~el~ 320 (354)
+.. .+...+.++.+++.++
T Consensus 204 If~------~~d~~~~i~~l~~~~~ 222 (227)
T 1tqx_A 204 IFN------AEDPKYVIDTMRVSVQ 222 (227)
T ss_dssp HHT------CSSHHHHHHHHHHHHH
T ss_pred HhC------CCCHHHHHHHHHHHHH
Confidence 552 1224455666665544
No 174
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=96.86 E-value=0.075 Score=49.62 Aligned_cols=114 Identities=18% Similarity=0.176 Sum_probs=82.2
Q ss_pred CCHHHHHHHHHhCCCEEEEec---CCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHH-HHHHHHcCcCEEEEc
Q 018519 218 LTAEDARIAVQAGAAGIIVSN---HGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTD-VFKALALGASGIFIG 293 (354)
Q Consensus 218 ~~~~~a~~~~~~G~d~I~vs~---~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~d-v~kalalGAd~V~ig 293 (354)
.++++|....+.|+|.+-++- ||-+......-.++.|.+|.+.++.++|++.=||=..+.| +.|++.+|..-|-|+
T Consensus 172 T~Peea~~Fv~TgvD~LAvaiGt~HG~Yk~~~p~Ld~~~L~~I~~~v~~~vpLVlHGgSG~p~e~i~~ai~~GV~KiNi~ 251 (306)
T 3pm6_A 172 TTPEESEEFVATGINWLAPAFGNVHGNYGPRGVQLDYERLQRINEAVGERVGLVLHGADPFTKEIFEKCIERGVAKVNVN 251 (306)
T ss_dssp CCHHHHHHHHTTTCSEECCCSSCCSSCCCTTCCCCCHHHHHHHHHHHTTTSEEEECSCTTCCHHHHHHHHHTTEEEEEES
T ss_pred CCHHHHHHHHHcCCCEEEEEcCccccCcCCCCCccCHHHHHHHHHHhCCCCCEEeeCCCCCCHHHHHHHHHcCCeEEEeC
Confidence 589999999999999988753 5654211223457889999998855799999998877765 668889999999999
Q ss_pred HHHHHHHhh-----cC---H-HHHHHHHHHHHHHHHHHHHHhCCCCh
Q 018519 294 RPVVYSLAA-----EG---E-KGVRRVLEMLREEFELAMALSGCRSL 331 (354)
Q Consensus 294 r~~l~~~~~-----~G---~-~gv~~~l~~l~~el~~~m~~~G~~~i 331 (354)
+-+..+... -+ . .-+....+.+++.++..|..+|...-
T Consensus 252 Tdl~~a~~~~~r~~~~~~~~~~~~~~~~~a~~~~v~~~i~~fgs~gk 298 (306)
T 3pm6_A 252 RAVNNEYVKVMREKAGSLPITRLHEEVTNAMQAAVEKIMDMIDSTGK 298 (306)
T ss_dssp HHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHHHHHTTCTTG
T ss_pred hHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 966443211 01 1 12234456778888889999987643
No 175
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=96.82 E-value=0.0061 Score=54.97 Aligned_cols=85 Identities=15% Similarity=0.198 Sum_probs=56.8
Q ss_pred hCCCEEEE-ecCCcC-CCCCCcChHHHHHHHHHHhc---CCccEEEcCCCCCHHHHHHHHHcCcCEEEEc-HHHHHHHhh
Q 018519 229 AGAAGIIV-SNHGAR-QLDYVPATIMALEEVVKATQ---GRIPVFLDGGVRRGTDVFKALALGASGIFIG-RPVVYSLAA 302 (354)
Q Consensus 229 ~G~d~I~v-s~~gg~-~~~~~~~~~~~l~~i~~~~~---~~i~vi~~GGi~~g~dv~kalalGAd~V~ig-r~~l~~~~~ 302 (354)
.++|.|.+ +-+.|. .....+..++-+.++++... .+++|.++|||. .+.+.++...|||.+.+| |.+..
T Consensus 127 ~~~D~VlvmsV~pGfggQ~f~~~~l~kI~~lr~~~~~~~~~~~I~VdGGI~-~~~~~~~~~aGAd~~V~G~saif~---- 201 (231)
T 3ctl_A 127 HKADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCN-QATYEKLMAAGADVFIVGTSGLFN---- 201 (231)
T ss_dssp GGCSEEEEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESCCS-TTTHHHHHHHTCCEEEECTTTTGG----
T ss_pred hcCCEEEEeeeccCcCCccccHHHHHHHHHHHHHHhccCCCceEEEECCcC-HHHHHHHHHcCCCEEEEccHHHhC----
Confidence 37998865 223332 12345677777777777653 268999999998 577888899999999999 76442
Q ss_pred cCHHH-HHHHHHHHHHHHH
Q 018519 303 EGEKG-VRRVLEMLREEFE 320 (354)
Q Consensus 303 ~G~~g-v~~~l~~l~~el~ 320 (354)
.+. ..+.++.+++.++
T Consensus 202 --~~d~~~~~~~~l~~~~~ 218 (231)
T 3ctl_A 202 --HAENIDEAWRIMTAQIL 218 (231)
T ss_dssp --GCSSHHHHHHHHHHHHH
T ss_pred --CCCcHHHHHHHHHHHHH
Confidence 112 3445666665554
No 176
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=96.81 E-value=0.003 Score=58.63 Aligned_cols=70 Identities=16% Similarity=0.254 Sum_probs=57.9
Q ss_pred ccCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHH
Q 018519 216 GVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRP 295 (354)
Q Consensus 216 Gi~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~ 295 (354)
.+-+.++++.+.++|+|.|.++|- +.+.+.++++.+++++++.++||| +.+.+.+....|+|.+.+|..
T Consensus 204 Ev~tl~ea~eAl~aGaD~I~LDn~----------~~~~l~~av~~~~~~v~ieaSGGI-t~~~i~~~a~tGVD~IsvGal 272 (287)
T 3tqv_A 204 EVTNLDELNQAIAAKADIVMLDNF----------SGEDIDIAVSIARGKVALEVSGNI-DRNSIVAIAKTGVDFISVGAI 272 (287)
T ss_dssp EESSHHHHHHHHHTTCSEEEEESC----------CHHHHHHHHHHHTTTCEEEEESSC-CTTTHHHHHTTTCSEEECSHH
T ss_pred EeCCHHHHHHHHHcCCCEEEEcCC----------CHHHHHHHHHhhcCCceEEEECCC-CHHHHHHHHHcCCCEEEEChh
Confidence 456889999999999999999772 235677777777678999999999 677777777799999999975
Q ss_pred H
Q 018519 296 V 296 (354)
Q Consensus 296 ~ 296 (354)
.
T Consensus 273 t 273 (287)
T 3tqv_A 273 T 273 (287)
T ss_dssp H
T ss_pred h
Confidence 4
No 177
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=96.79 E-value=0.0061 Score=61.72 Aligned_cols=81 Identities=16% Similarity=0.088 Sum_probs=61.5
Q ss_pred cCCHHHHHHHHHhC---CCEEEEecCCcCC-CCC---CcChHHHHHHHHHHhc----CCccEEEcCCCCCHHHHHHHHH-
Q 018519 217 VLTAEDARIAVQAG---AAGIIVSNHGARQ-LDY---VPATIMALEEVVKATQ----GRIPVFLDGGVRRGTDVFKALA- 284 (354)
Q Consensus 217 i~~~~~a~~~~~~G---~d~I~vs~~gg~~-~~~---~~~~~~~l~~i~~~~~----~~i~vi~~GGi~~g~dv~kala- 284 (354)
+.++++++.+.+.| +|+|.++.-..+. ... .+..++.+.++.+.+. .++||++.||| +.+++.+.++
T Consensus 115 ~ht~eea~~A~~~G~~~aDYv~~Gpvf~T~tK~~~~~~~~G~~~l~~i~~~~~~~~~~~iPvvAIGGI-~~~ni~~v~~~ 193 (540)
T 3nl6_A 115 VGFPEEVDELSKMGPDMVDYIGVGTLFPTLTKKNPKKAPMGTAGAIRVLDALERNNAHWCRTVGIGGL-HPDNIERVLYQ 193 (540)
T ss_dssp ECSHHHHHHHHHTCC--CCEEEESCCSCCCCCC----CCCHHHHHHHHHHHHHHTTCTTCEEEEESSC-CTTTHHHHHHH
T ss_pred CCCHHHHHHHHHcCCCCCCEEEEcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHhhccCCCCEEEEcCC-CHHHHHHHHHh
Confidence 46899999999999 9999984322221 111 1234777877777641 37999999999 7899999997
Q ss_pred -------cCcCEEEEcHHHHH
Q 018519 285 -------LGASGIFIGRPVVY 298 (354)
Q Consensus 285 -------lGAd~V~igr~~l~ 298 (354)
.|||+|.+++.++.
T Consensus 194 ~~~~g~~~GadgvAVvsaI~~ 214 (540)
T 3nl6_A 194 CVSSNGKRSLDGICVVSDIIA 214 (540)
T ss_dssp CBCTTSSCBCSCEEESHHHHT
T ss_pred hcccccccCceEEEEeHHHhc
Confidence 89999999998763
No 178
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=96.76 E-value=0.0015 Score=58.77 Aligned_cols=72 Identities=15% Similarity=0.115 Sum_probs=56.5
Q ss_pred ccCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcC-hHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHH-cCcCEEEEc
Q 018519 216 GVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPA-TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA-LGASGIFIG 293 (354)
Q Consensus 216 Gi~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kala-lGAd~V~ig 293 (354)
|+.+++++.++.++|+|.|.+ +.. ... ..+.|.+++..++ ++|+++.||| +...+...++ .||++|. |
T Consensus 125 G~~t~~e~~~A~~~Gad~vk~--FPa-----~~~~G~~~lk~i~~~~~-~ipvvaiGGI-~~~N~~~~l~~~Ga~~v~-g 194 (225)
T 1mxs_A 125 GISTPSEIMMGYALGYRRFKL--FPA-----EISGGVAAIKAFGGPFG-DIRFCPTGGV-NPANVRNYMALPNVMCVG-T 194 (225)
T ss_dssp EECSHHHHHHHHTTTCCEEEE--TTH-----HHHTHHHHHHHHHTTTT-TCEEEEBSSC-CTTTHHHHHHSTTBCCEE-E
T ss_pred eeCCHHHHHHHHHCCCCEEEE--ccC-----ccccCHHHHHHHHhhCC-CCeEEEECCC-CHHHHHHHHhccCCEEEE-E
Confidence 789999999999999999998 321 111 2456666666553 7999999999 5778999999 6999999 8
Q ss_pred HHHH
Q 018519 294 RPVV 297 (354)
Q Consensus 294 r~~l 297 (354)
+.+.
T Consensus 195 Sai~ 198 (225)
T 1mxs_A 195 TWML 198 (225)
T ss_dssp CTTS
T ss_pred chhc
Confidence 8654
No 179
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=96.71 E-value=0.0027 Score=57.69 Aligned_cols=74 Identities=19% Similarity=0.266 Sum_probs=59.5
Q ss_pred CHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHH
Q 018519 219 TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRP 295 (354)
Q Consensus 219 ~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~ 295 (354)
..+.|+...+.|+|.+.+-.-.+. ..+.....+.+.++.+.+ .+|+.+.||||+-+|+.+.|.+|||-|.+++.
T Consensus 33 P~~~a~~~~~~gad~lhvvDld~a-~~~~~~~~~~i~~i~~~~--~~pl~vGGGIrs~e~~~~~l~~GadkVii~t~ 106 (243)
T 4gj1_A 33 PLKKFKEYEKAGAKELHLVDLTGA-KDPSKRQFALIEKLAKEV--SVNLQVGGGIRSKEEVKALLDCGVKRVVIGSM 106 (243)
T ss_dssp HHHHHHHHHHHTCCEEEEEEHHHH-HCGGGCCHHHHHHHHHHC--CSEEEEESSCCCHHHHHHHHHTTCSEEEECTT
T ss_pred HHHHHHHHHHCCCCEEEEEecCcc-cccchhHHHHHHHHHHhc--CCCeEeccccccHHHHHHHHHcCCCEEEEccc
Confidence 456788899999999987321110 123455678888888877 89999999999999999999999999999994
No 180
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=96.68 E-value=0.00076 Score=63.16 Aligned_cols=69 Identities=17% Similarity=0.162 Sum_probs=42.5
Q ss_pred ccCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCC------ccEEEcCCCCCHHHHHHHHHcCcCE
Q 018519 216 GVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGR------IPVFLDGGVRRGTDVFKALALGASG 289 (354)
Q Consensus 216 Gi~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~------i~vi~~GGi~~g~dv~kalalGAd~ 289 (354)
.+.+.++++.+.++|+|+|-++|.+ .+.+.++++.+++. ++|.++||| +.+.+.+....|||.
T Consensus 205 ev~tlee~~~A~~aGaD~I~ld~~~----------~~~l~~~v~~l~~~~~g~~~v~I~ASGGI-t~~ni~~~~~~GvD~ 273 (294)
T 3c2e_A 205 ECLSEDEATEAIEAGADVIMLDNFK----------GDGLKMCAQSLKNKWNGKKHFLLECSGGL-NLDNLEEYLCDDIDI 273 (294)
T ss_dssp ECSSSHHHHHHHHHTCSEEECCC-------------------------------CCEEEEECCC-CC------CCCSCSE
T ss_pred ecCCHHHHHHHHHcCCCEEEECCCC----------HHHHHHHHHHhcccccCCCCeEEEEECCC-CHHHHHHHHHcCCCE
Confidence 4567799999999999999987621 24445555555433 999999999 899998888899999
Q ss_pred EEEcHH
Q 018519 290 IFIGRP 295 (354)
Q Consensus 290 V~igr~ 295 (354)
+.+|+.
T Consensus 274 i~vGs~ 279 (294)
T 3c2e_A 274 YSTSSI 279 (294)
T ss_dssp EECGGG
T ss_pred EEEech
Confidence 999986
No 181
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=96.64 E-value=0.0012 Score=61.39 Aligned_cols=68 Identities=24% Similarity=0.214 Sum_probs=54.7
Q ss_pred cCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcC---CccEEEcCCCCCHHHHHHHHHcCcCEEEEc
Q 018519 217 VLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQG---RIPVFLDGGVRRGTDVFKALALGASGIFIG 293 (354)
Q Consensus 217 i~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~---~i~vi~~GGi~~g~dv~kalalGAd~V~ig 293 (354)
+.+.++++.+.++|+|.|.++|- +.+.+.++++.+++ ++++.++||| +.+.+.+..++|+|.+.+|
T Consensus 200 V~tleea~eA~~aGaD~I~LDn~----------~~e~l~~av~~l~~~~~~v~ieASGGI-t~eni~~~a~tGVD~IsvG 268 (285)
T 1o4u_A 200 VENLEDALRAVEAGADIVMLDNL----------SPEEVKDISRRIKDINPNVIVEVSGGI-TEENVSLYDFETVDVISSS 268 (285)
T ss_dssp ESSHHHHHHHHHTTCSEEEEESC----------CHHHHHHHHHHHHHHCTTSEEEEEECC-CTTTGGGGCCTTCCEEEEG
T ss_pred eCCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhhccCCCceEEEECCC-CHHHHHHHHHcCCCEEEEe
Confidence 45899999999999999999772 23555566655543 7999999999 5777877778999999999
Q ss_pred HH
Q 018519 294 RP 295 (354)
Q Consensus 294 r~ 295 (354)
+.
T Consensus 269 sl 270 (285)
T 1o4u_A 269 RL 270 (285)
T ss_dssp GG
T ss_pred HH
Confidence 84
No 182
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=96.64 E-value=0.0039 Score=58.18 Aligned_cols=68 Identities=29% Similarity=0.406 Sum_probs=56.0
Q ss_pred cCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHH
Q 018519 217 VLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRP 295 (354)
Q Consensus 217 i~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~ 295 (354)
+-+.++++.+.++|+|.|.++|- +.+.+.++.+.+.+++++.++||| +...+.+....|+|.+.+|+.
T Consensus 216 vdtlde~~eAl~aGaD~I~LDn~----------~~~~l~~av~~i~~~v~ieaSGGI-~~~~i~~~a~tGVD~isvG~l 283 (298)
T 3gnn_A 216 VETLDQLRTALAHGARSVLLDNF----------TLDMMRDAVRVTEGRAVLEVSGGV-NFDTVRAIAETGVDRISIGAL 283 (298)
T ss_dssp ESSHHHHHHHHHTTCEEEEEESC----------CHHHHHHHHHHHTTSEEEEEESSC-STTTHHHHHHTTCSEEECGGG
T ss_pred eCCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhCCCCeEEEEcCC-CHHHHHHHHHcCCCEEEECCe
Confidence 56889999999999999999872 235566666666668999999999 567777777899999999983
No 183
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=96.56 E-value=0.0027 Score=64.61 Aligned_cols=78 Identities=23% Similarity=0.296 Sum_probs=58.4
Q ss_pred CHHHHHHHHHhCCCEEEEecCCc-CCCC-CCcChHHHHHHHHHHhcCCccEEEcCCCCCHHH-----------HHHHHHc
Q 018519 219 TAEDARIAVQAGAAGIIVSNHGA-RQLD-YVPATIMALEEVVKATQGRIPVFLDGGVRRGTD-----------VFKALAL 285 (354)
Q Consensus 219 ~~~~a~~~~~~G~d~I~vs~~gg-~~~~-~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~d-----------v~kalal 285 (354)
..+.|+.+.+.|+|.|.+.+-.+ .... ......+.+.++++.+ .+||++.|||++.+| +.+.+.+
T Consensus 282 p~~~A~~~~~~Ga~~l~~~dl~~~~~~~~~~~~~~~~i~~i~~~~--~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l~a 359 (555)
T 1jvn_A 282 PVQLAQKYYQQGADEVTFLNITSFRDCPLKDTPMLEVLKQAAKTV--FVPLTVGGGIKDIVDVDGTKIPALEVASLYFRS 359 (555)
T ss_dssp HHHHHHHHHHTTCSEEEEEEEC---CCCGGGCHHHHHHHHHTTTC--CSCEEEESSCSCEECTTCCEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEeCCccccccCCCchHHHHHHHHHhhC--CCcEEEeCccccchhcccccchHHHHHHHHHHc
Confidence 45678888999999998866432 1111 1233467777777665 899999999999955 9999999
Q ss_pred CcCEEEEcHHHHH
Q 018519 286 GASGIFIGRPVVY 298 (354)
Q Consensus 286 GAd~V~igr~~l~ 298 (354)
|||.|.||+..+.
T Consensus 360 Gad~V~igt~~~~ 372 (555)
T 1jvn_A 360 GADKVSIGTDAVY 372 (555)
T ss_dssp TCSEEEECHHHHH
T ss_pred CCCEEEECCHHhh
Confidence 9999999997654
No 184
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=96.56 E-value=0.0071 Score=56.96 Aligned_cols=69 Identities=23% Similarity=0.287 Sum_probs=56.5
Q ss_pred ccCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHH
Q 018519 216 GVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRP 295 (354)
Q Consensus 216 Gi~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~ 295 (354)
-+-+.++++.++++|+|.|.++|- +.+.+.++++.++++++|.++|||. .+.+.+..+.|+|.+.+|..
T Consensus 237 EVdtldea~eAl~aGaD~I~LDn~----------~~~~l~~av~~l~~~v~ieaSGGIt-~~~I~~~a~tGVD~isvGal 305 (320)
T 3paj_A 237 ETETLAELEEAISAGADIIMLDNF----------SLEMMREAVKINAGRAALENSGNIT-LDNLKECAETGVDYISVGAL 305 (320)
T ss_dssp EESSHHHHHHHHHTTCSEEEEESC----------CHHHHHHHHHHHTTSSEEEEESSCC-HHHHHHHHTTTCSEEECTHH
T ss_pred EECCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhCCCCeEEEECCCC-HHHHHHHHHcCCCEEEECce
Confidence 456889999999999999999872 2466777777776789999999995 66666666699999999984
No 185
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=96.52 E-value=0.0056 Score=57.06 Aligned_cols=69 Identities=17% Similarity=0.178 Sum_probs=57.0
Q ss_pred ccCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHH
Q 018519 216 GVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRP 295 (354)
Q Consensus 216 Gi~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~ 295 (354)
-+-+.++++.++++|+|.|.++|- +.+.+.++++.+++++.+.++||| +.+.+.++...|+|.+.+|..
T Consensus 213 Ev~tl~e~~eAl~aGaDiImLDn~----------s~~~l~~av~~~~~~v~leaSGGI-t~~~i~~~A~tGVD~IsvGal 281 (300)
T 3l0g_A 213 ECDNISQVEESLSNNVDMILLDNM----------SISEIKKAVDIVNGKSVLEVSGCV-NIRNVRNIALTGVDYISIGCI 281 (300)
T ss_dssp EESSHHHHHHHHHTTCSEEEEESC----------CHHHHHHHHHHHTTSSEEEEESSC-CTTTHHHHHTTTCSEEECGGG
T ss_pred EECCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHhhcCceEEEEECCC-CHHHHHHHHHcCCCEEEeCcc
Confidence 456899999999999999999873 236677777777778999999999 567777777799999999974
No 186
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=96.51 E-value=0.0043 Score=57.45 Aligned_cols=62 Identities=19% Similarity=0.177 Sum_probs=45.1
Q ss_pred HHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHh----------cCCccEEEcCCCCCHHHHHHHHHcCcC
Q 018519 223 ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAT----------QGRIPVFLDGGVRRGTDVFKALALGAS 288 (354)
Q Consensus 223 a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~----------~~~i~vi~~GGi~~g~dv~kalalGAd 288 (354)
++.+.++|+|+|..|.. ...+.++.+.+.-.++.+ +.+++|-++||||+.+|+++.+.+||+
T Consensus 178 ~~ia~eaGADfVKTSTG----f~~~gAT~edv~lm~~~v~~~~~~~~~tg~~vgVKaaGGIrt~e~al~~i~aga~ 249 (281)
T 2a4a_A 178 TLAVLNGNADFIKTSTG----KVQINATPSSVEYIIKAIKEYIKNNPEKNNKIGLKVSGGISDLNTASHYILLARR 249 (281)
T ss_dssp HHHHHTTTCSEEECCCS----CSSCCCCHHHHHHHHHHHHHHHHHCGGGTTCCEEEEESSCCSHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCEEEeCCC----CCCCCCCHHHHHHHHHHHHHhhcccccCCCCceEEEeCCCCCHHHHHHHHHHhhh
Confidence 45778999999997642 111334444443333433 568999999999999999999999986
No 187
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=96.50 E-value=0.011 Score=53.38 Aligned_cols=72 Identities=18% Similarity=0.224 Sum_probs=54.1
Q ss_pred CHHHHHHHHHh-----CCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEc
Q 018519 219 TAEDARIAVQA-----GAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 293 (354)
Q Consensus 219 ~~~~a~~~~~~-----G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~ig 293 (354)
+++++.....+ |...|.+-..| . +...+.+.++++.. .++||++-|||++++++.+++. |||+|.+|
T Consensus 143 ~~e~iaa~A~~a~~~~g~~~vY~e~sG-~-----~g~~~~v~~ir~~~-~~~pv~vGfGI~~~e~a~~~~~-gAD~VVVG 214 (235)
T 3w01_A 143 TTEDLEAYAQMVNHMYRLPVMYIEYSG-I-----YGDVSKVQAVSEHL-TETQLFYGGGISSEQQATEMAA-IADTIIVG 214 (235)
T ss_dssp CHHHHHHHHHHHHHTTCCSEEEEECTT-S-----CCCHHHHHHHHTTC-SSSEEEEESCCCSHHHHHHHHT-TSSEEEEC
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEecCC-C-----cCCHHHHHHHHHhc-CCCCEEEECCcCCHHHHHHHHc-CCCEEEEC
Confidence 56665554443 88888885533 2 22567788887754 2689999999999999988776 99999999
Q ss_pred HHHHH
Q 018519 294 RPVVY 298 (354)
Q Consensus 294 r~~l~ 298 (354)
+.+..
T Consensus 215 Sai~~ 219 (235)
T 3w01_A 215 DIIYK 219 (235)
T ss_dssp THHHH
T ss_pred Cceec
Confidence 98875
No 188
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=96.47 E-value=0.0041 Score=57.83 Aligned_cols=68 Identities=13% Similarity=0.151 Sum_probs=54.2
Q ss_pred cCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcC---CccEEEcCCCCCHHHHHHHHHcCcCEEEEc
Q 018519 217 VLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQG---RIPVFLDGGVRRGTDVFKALALGASGIFIG 293 (354)
Q Consensus 217 i~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~---~i~vi~~GGi~~g~dv~kalalGAd~V~ig 293 (354)
+.+.++++.+.++|+|.|.++|- +.+.+.++++.+++ +++|.++||| +.+.+.+....|+|.+.+|
T Consensus 201 v~t~eea~eal~aGaD~I~LDn~----------~~~~~~~~v~~l~~~~~~v~ieaSGGI-t~~~i~~~a~tGVD~isvG 269 (284)
T 1qpo_A 201 VDSLEQLDAVLPEKPELILLDNF----------AVWQTQTAVQRRDSRAPTVMLESSGGL-SLQTAATYAETGVDYLAVG 269 (284)
T ss_dssp ESSHHHHHHHGGGCCSEEEEETC----------CHHHHHHHHHHHHHHCTTCEEEEESSC-CTTTHHHHHHTTCSEEECG
T ss_pred eCCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhhccCCCeEEEEECCC-CHHHHHHHHhcCCCEEEEC
Confidence 45889999999999999999772 22444455554443 7999999999 6888888888999999999
Q ss_pred HH
Q 018519 294 RP 295 (354)
Q Consensus 294 r~ 295 (354)
+.
T Consensus 270 ~l 271 (284)
T 1qpo_A 270 AL 271 (284)
T ss_dssp GG
T ss_pred HH
Confidence 84
No 189
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=96.44 E-value=0.0048 Score=56.60 Aligned_cols=62 Identities=27% Similarity=0.262 Sum_probs=45.6
Q ss_pred HHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHH-----hcCCccEEEcCCCCCHHHHHHHHHcCcC
Q 018519 223 ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKA-----TQGRIPVFLDGGVRRGTDVFKALALGAS 288 (354)
Q Consensus 223 a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~-----~~~~i~vi~~GGi~~g~dv~kalalGAd 288 (354)
++.+.++|+|+|..|.. +..+.++.+.+.-.++. ++.+++|-++||||+.+|+++.+.+||+
T Consensus 156 ~~ia~eaGADfVKTSTG----f~~~gAt~e~v~lm~~~I~~~~~g~~v~VKaaGGIrt~~~al~~i~aga~ 222 (260)
T 1p1x_A 156 SEISIKAGADFIKTSTG----KVAVNATPESARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLAIADE 222 (260)
T ss_dssp HHHHHHTTCSEEECCCS----CSSCCCCHHHHHHHHHHHHHHTCTTTCEEECBSSCCSHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCEEEeCCC----CCCCCCCHHHHHHHHHHHHHhcCCCCceEEEeCCCCCHHHHHHHHHhhhh
Confidence 45778999999997642 11233455544444444 4568999999999999999999999886
No 190
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=96.43 E-value=0.0055 Score=54.71 Aligned_cols=80 Identities=23% Similarity=0.323 Sum_probs=52.2
Q ss_pred CHHHHHHHHHhCCCEEEEecCC--cCC---CCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEc
Q 018519 219 TAEDARIAVQAGAAGIIVSNHG--ARQ---LDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 293 (354)
Q Consensus 219 ~~~~a~~~~~~G~d~I~vs~~g--g~~---~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~ig 293 (354)
+.++..++.+.|.+.|.+.+.- |+. ....+..++...+..+.+..++||++.|||.++.++.++...|||+|.+|
T Consensus 120 ~~~e~~~~~~~~~~~i~~~~~~~iGtG~~~~t~~~~~~~~~~~~ir~~~~~~~ii~ggGI~~~~~~~~~~~~gaDgvlVG 199 (219)
T 2h6r_A 120 NINTSKAVAALSPDCIAVEPPELIGTGIPVSKANPEVVEGTVRAVKEINKDVKVLCGAGISKGEDVKAALDLGAEGVLLA 199 (219)
T ss_dssp SSHHHHHHTTTCCSEEEECCCC--------------CSHHHHHHHHHHCTTCEEEECSSCCSHHHHHHHHTTTCCCEEES
T ss_pred CchHHHHHHhCCCCEEEEEeccccccCCCCccCCHHHHHHHHHHHHhccCCCeEEEEeCcCcHHHHHHHhhCCCCEEEEc
Confidence 4455677778898888774421 121 11112112233233333334799999999999999999989999999999
Q ss_pred HHHHH
Q 018519 294 RPVVY 298 (354)
Q Consensus 294 r~~l~ 298 (354)
+.++.
T Consensus 200 sAi~~ 204 (219)
T 2h6r_A 200 SGVVK 204 (219)
T ss_dssp HHHHT
T ss_pred HHHhC
Confidence 98875
No 191
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=96.38 E-value=0.42 Score=44.25 Aligned_cols=109 Identities=18% Similarity=0.204 Sum_probs=78.0
Q ss_pred CCHHHHHHHH-HhCCCEEEEec---CCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHH-HHHHHHcCcCEEEE
Q 018519 218 LTAEDARIAV-QAGAAGIIVSN---HGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTD-VFKALALGASGIFI 292 (354)
Q Consensus 218 ~~~~~a~~~~-~~G~d~I~vs~---~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~d-v~kalalGAd~V~i 292 (354)
.+||+|+... +.|+|.+-++- ||-+.. .-.-.++.|.+|.+.+ ++|++.=||=..+.+ +.|++.+|..-|-+
T Consensus 159 T~Peea~~Fv~~TgvD~LAvaiGt~HG~Y~~-~p~Ld~~~L~~I~~~v--~vpLVlHGgSG~~~e~i~~ai~~Gv~KiNi 235 (288)
T 3q94_A 159 ADPAECKHLVEATGIDCLAPALGSVHGPYKG-EPNLGFAEMEQVRDFT--GVPLVLHGGTGIPTADIEKAISLGTSKINV 235 (288)
T ss_dssp CCHHHHHHHHHHHCCSEEEECSSCBSSCCSS-SCCCCHHHHHHHHHHH--CSCEEECCCTTCCHHHHHHHHHTTEEEEEE
T ss_pred CCHHHHHHHHHHHCCCEEEEEcCcccCCcCC-CCccCHHHHHHHHHhc--CCCEEEeCCCCCCHHHHHHHHHcCCeEEEE
Confidence 6899998876 69999999863 665421 1223578899999998 799999998777765 66899999999999
Q ss_pred cHHHHHHHhh-------cC------HHHHHHHHHHHHHHHHHHHHHhCCC
Q 018519 293 GRPVVYSLAA-------EG------EKGVRRVLEMLREEFELAMALSGCR 329 (354)
Q Consensus 293 gr~~l~~~~~-------~G------~~gv~~~l~~l~~el~~~m~~~G~~ 329 (354)
++-+-++... .. ..-+....+.+++.++..|..+|..
T Consensus 236 ~Tdl~~a~~~~~r~~~~~~~~~~dpr~~~~~~~~a~~~~v~~~~~~~gs~ 285 (288)
T 3q94_A 236 NTENQIEFTKAVREVLNKDQEVYDPRKFIGPGRDAIKATVIGKIREFGSN 285 (288)
T ss_dssp CHHHHHHHHHHHHHHHHHCSSCCCTHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred ChHHHHHHHHHHHHHHHhCCCcCCHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9976554321 00 1122334456777777888888764
No 192
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=96.33 E-value=0.012 Score=55.16 Aligned_cols=72 Identities=28% Similarity=0.213 Sum_probs=51.2
Q ss_pred HHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhc--CCcc-EEEcCCCCCHHH----HHHHHHcCcCEEEEcH
Q 018519 222 DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQ--GRIP-VFLDGGVRRGTD----VFKALALGASGIFIGR 294 (354)
Q Consensus 222 ~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~--~~i~-vi~~GGi~~g~d----v~kalalGAd~V~igr 294 (354)
-++.+.+.|+|.|.+ +... + +..+++.+.++.+... ..+| |++.||+ +.++ +..++..||++|.+||
T Consensus 182 aa~~a~~lGaD~iKv--~~~~--~-~~g~~~~~~~vv~~~~~~~~~P~Vv~aGG~-~~~~~~~~~~~a~~aGa~Gv~vGR 255 (304)
T 1to3_A 182 AAKELGDSGADLYKV--EMPL--Y-GKGARSDLLTASQRLNGHINMPWVILSSGV-DEKLFPRAVRVAMEAGASGFLAGR 255 (304)
T ss_dssp HHHHHTTSSCSEEEE--CCGG--G-GCSCHHHHHHHHHHHHHTCCSCEEECCTTS-CTTTHHHHHHHHHHTTCCEEEESH
T ss_pred HHHHHHHcCCCEEEe--CCCc--C-CCCCHHHHHHHHHhccccCCCCeEEEecCC-CHHHHHHHHHHHHHcCCeEEEEeh
Confidence 377888999999988 3211 1 1125666777766611 1789 9999999 5644 6677789999999999
Q ss_pred HHHHH
Q 018519 295 PVVYS 299 (354)
Q Consensus 295 ~~l~~ 299 (354)
.+...
T Consensus 256 aI~q~ 260 (304)
T 1to3_A 256 AVWSS 260 (304)
T ss_dssp HHHGG
T ss_pred HHhCc
Confidence 87653
No 193
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=96.26 E-value=0.0034 Score=54.63 Aligned_cols=36 Identities=14% Similarity=0.128 Sum_probs=33.9
Q ss_pred CCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHHHH
Q 018519 263 GRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYS 299 (354)
Q Consensus 263 ~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l~~ 299 (354)
-++|||+.|+|++.+|+.+ +..||++|..+++-||.
T Consensus 148 ~~~PiIaGGlI~t~edv~~-l~aGA~aIsTs~~~LW~ 183 (188)
T 1vkf_A 148 PGRTVIAAGLVETEEEARE-ILKHVSAISTSSRILWK 183 (188)
T ss_dssp TTSEEEEESCCCSHHHHHH-HTTTSSEEEECCHHHHT
T ss_pred cCCCEEEECCcCCHHHHHH-HHCCCeEEEeCCHHHhC
Confidence 3899999999999999999 99999999999998884
No 194
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=96.22 E-value=0.0087 Score=54.17 Aligned_cols=67 Identities=9% Similarity=-0.071 Sum_probs=48.1
Q ss_pred hCCCEEEE-ecCCc--CCCCCCcChHHHHHHHHHHhcC---CccEEEcCCCCCHHHHHHHHH--cCcCEEEEcHHHH
Q 018519 229 AGAAGIIV-SNHGA--RQLDYVPATIMALEEVVKATQG---RIPVFLDGGVRRGTDVFKALA--LGASGIFIGRPVV 297 (354)
Q Consensus 229 ~G~d~I~v-s~~gg--~~~~~~~~~~~~l~~i~~~~~~---~i~vi~~GGi~~g~dv~kala--lGAd~V~igr~~l 297 (354)
.++|.|.+ +=+.| .| ...+..++-+.++++.+.. +++|.++|||. .+.+.+... .|||.+.+||.+.
T Consensus 147 ~~~D~vlvMsv~pgfggq-~f~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI~-~~~~~~~~~~~aGad~~VvGSaIf 221 (237)
T 3cu2_A 147 DQIDVIQLLTLDPRNGTK-YPSELILDRVIQVEKRLGNRRVEKLINIDGSMT-LELAKYFKQGTHQIDWLVSGSALF 221 (237)
T ss_dssp TTCSEEEEESEETTTTEE-CCHHHHHHHHHHHHHHHGGGGGGCEEEEESSCC-HHHHHHHHHSSSCCCCEEECGGGG
T ss_pred hcCceeeeeeeccCcCCe-ecChhHHHHHHHHHHHHHhcCCCceEEEECCcC-HHHHHHHHHhCCCCcEEEEeeHHh
Confidence 47998866 22322 22 1234456667777776632 58999999997 788889999 9999999999754
No 195
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=96.21 E-value=0.009 Score=59.54 Aligned_cols=236 Identities=17% Similarity=0.204 Sum_probs=131.6
Q ss_pred hhcccceeecccc-CCCCCCccceeEc-CeeeccceEecccccccccCChhhHHHHHHHHHcCCcEEecCCCCCCHHHHH
Q 018519 41 NAFSRILFRPRIL-IDVSKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA 118 (354)
Q Consensus 41 ~~~~~i~l~pr~l-~~~~~vd~st~l~-g~~l~~Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~s~~~~~~~eei~ 118 (354)
..||++.|+|... .+.+++++++.|- ...+..||+.+||...+ +..++.+..+.|....+.. ..+.++..
T Consensus 12 ~~~~d~~~~p~~~~~~p~~v~~~t~lt~~l~~~~Piv~a~M~~vt------~~eLa~av~~~Gg~G~i~~--~~~~e~~~ 83 (491)
T 1zfj_A 12 YTFDDVLLIPAESHVLPNEVDLKTKLADNLTLNIPIITAAMDTVT------GSKMAIAIARAGGLGVIHK--NMSITEQA 83 (491)
T ss_dssp CCGGGEEECCCCCCSCGGGCCCCEEEETTEEESSSEEECCCTTTC------SHHHHHHHHHTTCEEEECC--SSCHHHHH
T ss_pred CChhhEEeccCcCCcCccccccchhhhhcceecCceEecCchhcc------HHHHHHHHHHcCCceEEeC--CCCHHHHH
Confidence 5799999999765 3447899999885 47789999999998654 5578889999998877753 24555432
Q ss_pred h-------hCC--CceEEEEeecCChHHHHHHHHHHHHcCCCEEEEecC-CC--CCC-chhHHhhhcc--CCC--CcCcc
Q 018519 119 S-------TGP--GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVD-TP--RLG-RREADIKNRF--TLP--PFLTL 181 (354)
Q Consensus 119 ~-------~~~--~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~i~vd-~p--~~g-~r~~~~r~~~--~~p--~~~~~ 181 (354)
+ ... .+..+-+. ......+.++...+.+...+-+.=+ .- ..| -..+|+.... ..+ .-+..
T Consensus 84 ~~i~~v~~~~~im~~~~~~v~---~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~~~~~~~~v~~im~~ 160 (491)
T 1zfj_A 84 EEVRKVKRSENGVIIDPFFLT---PEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRFISDYNAPISEHMTS 160 (491)
T ss_dssp HHHHHHHHHTTTTSSSCCCBC---SSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHHCSCSSSBTTTSCCC
T ss_pred HHHHHHhhHHhcCcCCCeEEC---CCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhhhccCCCcHHHHcCC
Confidence 2 111 11111111 1223456777777778777655320 00 000 0112221100 000 00000
Q ss_pred ---ccc------c---------CCccCc-Ccc-c------chhhHHHHHhh---hcC--Cccccc-cc----CCHHHHHH
Q 018519 182 ---KNF------Q---------GLDLGK-MDE-A------NDSGLAAYVAG---QID--RSLSWK-GV----LTAEDARI 225 (354)
Q Consensus 182 ---~~~------~---------~~~~~~-~~~-~------~~~~~~~~~~~---~~~--~~~~w~-Gi----~~~~~a~~ 225 (354)
..+ . +...-+ .+. . ....+.+.+.. ..+ ..+.+. .+ ...+.+..
T Consensus 161 ~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~~~~~~~d~~~~~~vg~~i~~~~~~~~~a~~ 240 (491)
T 1zfj_A 161 EHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEFPHAAKDEFGRLLVAAAVGVTSDTFERAEA 240 (491)
T ss_dssp SCCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHHCTTCCBCTTSCBCCEEEECSSTTHHHHHHH
T ss_pred CCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHhccccccCcCCcEEEEEeccCchhHHHHHHH
Confidence 000 0 000000 000 0 00111111111 000 001111 11 23689999
Q ss_pred HHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEc
Q 018519 226 AVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 293 (354)
Q Consensus 226 ~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~ig 293 (354)
+.++|+|+|++++.+|+ ....++.+.++++.++ .+|++ .|++.+.+++.+++.+|||+|.+|
T Consensus 241 l~~~G~d~ivi~~a~g~----~~~~~~~i~~l~~~~p-~~pvi-~G~v~t~~~a~~~~~~Gad~I~vg 302 (491)
T 1zfj_A 241 LFEAGADAIVIDTAHGH----SAGVLRKIAEIRAHFP-NRTLI-AGNIATAEGARALYDAGVDVVKVG 302 (491)
T ss_dssp HHHHTCSEEEECCSCTT----CHHHHHHHHHHHHHCS-SSCEE-EEEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHcCCCeEEEeeecCc----chhHHHHHHHHHHHCC-CCcEe-CCCccCHHHHHHHHHcCCCEEEEC
Confidence 99999999999765442 1235667777777663 78888 899999999999999999999887
No 196
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=96.17 E-value=0.03 Score=51.09 Aligned_cols=73 Identities=21% Similarity=0.210 Sum_probs=58.6
Q ss_pred CHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHH
Q 018519 219 TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 297 (354)
Q Consensus 219 ~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l 297 (354)
..+.|+...++||++|.|-.--+ .-....+.|..+++.+ ++||+.-++|.+..++..++++|||+|.++...+
T Consensus 67 p~~~A~~~~~~GA~~isvlt~~~----~f~G~~~~l~~i~~~v--~lPvl~kdfI~d~~qi~~a~~~GAD~VlL~~~~l 139 (254)
T 1vc4_A 67 PVEAALAYARGGARAVSVLTEPH----RFGGSLLDLKRVREAV--DLPLLRKDFVVDPFMLEEARAFGASAALLIVALL 139 (254)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCS----SSCCCHHHHHHHHHHC--CSCEEEESCCCSHHHHHHHHHTTCSEEEEEHHHH
T ss_pred HHHHHHHHHHcCCCEEEEecchh----hhccCHHHHHHHHHhc--CCCEEECCcCCCHHHHHHHHHcCCCEEEECccch
Confidence 46889999999999998832211 1112456777888877 8999999999999999999999999999998755
No 197
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=96.14 E-value=0.013 Score=56.19 Aligned_cols=69 Identities=19% Similarity=0.049 Sum_probs=52.9
Q ss_pred CHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEc
Q 018519 219 TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 293 (354)
Q Consensus 219 ~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~ig 293 (354)
..+.++.+.++|+|.|+++...|. ....++.+..+++..+ ++||++ |++.|.+++.++..+|||+|.+|
T Consensus 101 ~~e~~~~a~~aGvdvI~id~a~G~----~~~~~e~I~~ir~~~~-~~~Vi~-G~V~T~e~A~~a~~aGaD~I~Vg 169 (361)
T 3r2g_A 101 ELQRAEALRDAGADFFCVDVAHAH----AKYVGKTLKSLRQLLG-SRCIMA-GNVATYAGADYLASCGADIIKAG 169 (361)
T ss_dssp HHHHHHHHHHTTCCEEEEECSCCS----SHHHHHHHHHHHHHHT-TCEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCC----cHhHHHHHHHHHHhcC-CCeEEE-cCcCCHHHHHHHHHcCCCEEEEc
Confidence 457788999999999999642222 1223567777777653 688887 67999999999999999999985
No 198
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=95.99 E-value=0.59 Score=43.91 Aligned_cols=109 Identities=17% Similarity=0.236 Sum_probs=77.5
Q ss_pred CCHHHHHHHH-HhCCCEEEEec---CCcCCCCCCcCh----HHHHHHHHHHhcCCccEEEcCCC----------------
Q 018519 218 LTAEDARIAV-QAGAAGIIVSN---HGARQLDYVPAT----IMALEEVVKATQGRIPVFLDGGV---------------- 273 (354)
Q Consensus 218 ~~~~~a~~~~-~~G~d~I~vs~---~gg~~~~~~~~~----~~~l~~i~~~~~~~i~vi~~GGi---------------- 273 (354)
.+|++|.... +.|+|.+-++- ||-+... +.|. ++.|.+|.+.+ ++|++.=||=
T Consensus 153 TdPeea~~Fv~~TgvD~LAvaiGt~HG~Yk~~-~~p~~~L~~~~L~~I~~~~--~vpLVlHGgSsvp~~~~~~~~~~gg~ 229 (323)
T 2isw_A 153 TEPQDAKKFVELTGVDALAVAIGTSHGAYKFK-SESDIRLAIDRVKTISDLT--GIPLVMHGSSSVPKDVKDMINKYGGK 229 (323)
T ss_dssp CCHHHHHHHHHHHCCSEEEECSSCCSSSBCCC-C----CCCCHHHHHHHHHH--CSCEEECSCCCCCHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHCCCEEEEecCccccccCCC-CCcccccCHHHHHHHHHHh--CCCeEEECCCCCCHHHHHHHHHhccc
Confidence 6899998876 79999999863 6654322 3333 67899999988 7999999954
Q ss_pred -----C-CHHHHHHHHHcCcCEEEEcHHHHHHHhh-------cC------HHHHHHHHHHHHHHHHHHHHHhCCC
Q 018519 274 -----R-RGTDVFKALALGASGIFIGRPVVYSLAA-------EG------EKGVRRVLEMLREEFELAMALSGCR 329 (354)
Q Consensus 274 -----~-~g~dv~kalalGAd~V~igr~~l~~~~~-------~G------~~gv~~~l~~l~~el~~~m~~~G~~ 329 (354)
. .-+++.||+.+|..-|-+++-+-++... .. ..-+....+.+++.++..|..+|..
T Consensus 230 ~~~~~Gvp~e~i~~ai~~GV~KiNi~Tdl~~A~~~~vr~~~~~~~~~~dpr~~l~~~~~a~~~~v~~~~~~~gs~ 304 (323)
T 2isw_A 230 MPDAVGVPIESIVHAIGEGVCKINVDSDSRMAMTGAIRKVFVEHPEKFDPRDYLGPGRDAITEMLIPKIKAFGSA 304 (323)
T ss_dssp CTTCBCCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHHCTTCCCTHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred cccCCCCCHHHHHHHHHCCCeEEEEChHHHHHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 2 3467889999999999999966544321 11 1123344567888888889998865
No 199
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=95.99 E-value=0.24 Score=47.89 Aligned_cols=208 Identities=22% Similarity=0.201 Sum_probs=113.2
Q ss_pred CCCCCccceeEcCeeec---cceEecccccccccCChhhHHHHHHHHHcCCcEEecCCCCCCHHHHHhhCCCceEEEEee
Q 018519 55 DVSKIDMNTTVLGFKIS---MPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLYV 131 (354)
Q Consensus 55 ~~~~vd~st~l~g~~l~---~Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~s~~~~~~~eei~~~~~~~~~~QLy~ 131 (354)
....-++.+++.+..+. .+++++|.+.. ..+.-..++++++++|+.++.... ...+ .. +..||
T Consensus 123 ~~~~~~t~i~i~~~~iG~~~~~~Iigpcsve---s~e~a~~~a~~~k~aGa~~vk~q~--fkpr----ts--~~~f~--- 188 (385)
T 3nvt_A 123 KNKKEDTIVTVKGLPIGNGEPVFVFGPCSVE---SYEQVAAVAESIKAKGLKLIRGGA--FKPR----TS--PYDFQ--- 188 (385)
T ss_dssp TTCCSCCCEEETTEEETSSSCEEEEECSBCC---CHHHHHHHHHHHHHTTCCEEECBS--SCCC----SS--TTSCC---
T ss_pred ccCCCCcEEEECCEEECCCCeEEEEEeCCcC---CHHHHHHHHHHHHHcCCCeEEccc--ccCC----CC--hHhhc---
Confidence 34445667777776664 36788887754 233345899999999998776422 1110 11 22233
Q ss_pred cCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCC-cCccccccCCccCcCcccchhhHHHHHhhhcCC
Q 018519 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPP-FLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDR 210 (354)
Q Consensus 132 ~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (354)
.-..+....+.+.+++.|...+.=-.|... -+.-..+ ++. .++..++.+ ..+-+.+.+...|
T Consensus 189 gl~~egl~~L~~~~~~~Gl~~~te~~d~~~-----~~~l~~~-vd~lkIgs~~~~n-----------~~LL~~~a~~gkP 251 (385)
T 3nvt_A 189 GLGLEGLKILKRVSDEYGLGVISEIVTPAD-----IEVALDY-VDVIQIGARNMQN-----------FELLKAAGRVDKP 251 (385)
T ss_dssp CCTHHHHHHHHHHHHHHTCEEEEECCSGGG-----HHHHTTT-CSEEEECGGGTTC-----------HHHHHHHHTSSSC
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEecCCHHH-----HHHHHhh-CCEEEECcccccC-----------HHHHHHHHccCCc
Confidence 113455555666677788765432222111 1111111 010 011111111 1234445566667
Q ss_pred ccccccc-CCHHHHHHH----HHhCCCEEEEecCCcCCCCC---CcChHHHHHHHHHHhcCCccEEEc----CCCCCHH-
Q 018519 211 SLSWKGV-LTAEDARIA----VQAGAAGIIVSNHGARQLDY---VPATIMALEEVVKATQGRIPVFLD----GGVRRGT- 277 (354)
Q Consensus 211 ~~~w~Gi-~~~~~a~~~----~~~G~d~I~vs~~gg~~~~~---~~~~~~~l~~i~~~~~~~i~vi~~----GGi~~g~- 277 (354)
.+...|. .+.++...+ .+.|.+-|++--.|.+.... ....+..++.+++.. .+||+.| +|-+.-.
T Consensus 252 Vilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~~~~~ldl~~i~~lk~~~--~lpV~~D~th~~G~r~~v~ 329 (385)
T 3nvt_A 252 ILLKRGLSATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLDISAVPILKKET--HLPVMVDVTHSTGRKDLLL 329 (385)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHB--SSCEEEEHHHHHCCGGGHH
T ss_pred EEEecCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccccCHHHHHHHHHhc--CCCEEEcCCCCCCccchHH
Confidence 7776787 688877655 45687666664334443322 123456777777755 6899887 3333322
Q ss_pred -HHHHHHHcCcCEEEEcHH
Q 018519 278 -DVFKALALGASGIFIGRP 295 (354)
Q Consensus 278 -dv~kalalGAd~V~igr~ 295 (354)
=...|+++|||+++|-+-
T Consensus 330 ~~a~AAvA~GA~gl~iE~H 348 (385)
T 3nvt_A 330 PCAKAALAIEADGVMAEVH 348 (385)
T ss_dssp HHHHHHHHTTCSEEEEEBC
T ss_pred HHHHHHHHhCCCEEEEEec
Confidence 245788999999999873
No 200
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=95.98 E-value=0.094 Score=48.49 Aligned_cols=128 Identities=16% Similarity=0.194 Sum_probs=78.5
Q ss_pred eecCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcC
Q 018519 130 YVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQID 209 (354)
Q Consensus 130 y~~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (354)
|...+.+.+.+.++.+.++|++.+++.+=.|- + .+ ......++++....
T Consensus 105 Ys~~E~~~M~~dI~~~~~~GAdGvVfG~L~~d----------------g----~i-----------D~~~~~~Li~~a~~ 153 (287)
T 3iwp_A 105 YSDREIEVMKADIRLAKLYGADGLVFGALTED----------------G----HI-----------DKELCMSLMAICRP 153 (287)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCSEEEECCBCTT----------------S----CB-----------CHHHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHHHHHHHcCCCEEEEeeeCCC----------------C----Cc-----------CHHHHHHHHHHcCC
Confidence 43334567888888999999999988642221 0 00 01122333333222
Q ss_pred Ccccc----cccCCHHHH-HHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHH
Q 018519 210 RSLSW----KGVLTAEDA-RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA 284 (354)
Q Consensus 210 ~~~~w----~Gi~~~~~a-~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kala 284 (354)
..+++ +-+.++..| +.+++.|+|.|-.|| + .......++.|.++.+..+++++|++.|||+. ..+.+.+.
T Consensus 154 l~vTFHRAFD~~~d~~~Ale~Li~lGvdrILTSG--~--~~~a~~Gl~~Lk~Lv~~a~~rI~ImaGGGV~~-~Ni~~l~~ 228 (287)
T 3iwp_A 154 LPVTFHRAFDMVHDPMAALETLLTLGFERVLTSG--C--DSSALEGLPLIKRLIEQAKGRIVVMPGGGITD-RNLQRILE 228 (287)
T ss_dssp SCEEECGGGGGCSCHHHHHHHHHHHTCSEEEECT--T--SSSTTTTHHHHHHHHHHHTTSSEEEECTTCCT-TTHHHHHH
T ss_pred CcEEEECchhccCCHHHHHHHHHHcCCCEEECCC--C--CCChHHhHHHHHHHHHHhCCCCEEEECCCcCH-HHHHHHHH
Confidence 22222 233345544 577888999998744 2 22345667778888777767899999999964 45555555
Q ss_pred -cCcCEEEEc
Q 018519 285 -LGASGIFIG 293 (354)
Q Consensus 285 -lGAd~V~ig 293 (354)
+|++.+=+.
T Consensus 229 ~tG~~~~H~S 238 (287)
T 3iwp_A 229 GSGATEFHCS 238 (287)
T ss_dssp HHCCSEEEEC
T ss_pred hhCCCEEeEC
Confidence 899887654
No 201
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=95.97 E-value=0.015 Score=54.14 Aligned_cols=94 Identities=22% Similarity=0.350 Sum_probs=62.8
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcCh---HHHHHHHHHHhcCCccEEEcCCCCCHHHHHH----HHHcCcCEEEE
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPAT---IMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFI 292 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~---~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~k----alalGAd~V~i 292 (354)
.+.+..+++.|+|+|++.|+-|-. ...+. .+.+..+++.+++++|||+--|=.+-.++++ |-.+|||++++
T Consensus 26 ~~lv~~li~~Gv~gl~v~GttGE~--~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv 103 (292)
T 3daq_A 26 KAHVNFLLENNAQAIIVNGTTAES--PTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIML 103 (292)
T ss_dssp HHHHHHHHHTTCCEEEESSGGGTG--GGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEECcccccc--ccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEE
Confidence 355667789999999997664421 11222 2345556666677899998766666677664 44489999999
Q ss_pred cHHHHHHHhhcCHHHHHHHHHHHHHH
Q 018519 293 GRPVVYSLAAEGEKGVRRVLEMLREE 318 (354)
Q Consensus 293 gr~~l~~~~~~G~~gv~~~l~~l~~e 318 (354)
-.|+++.. .++++.++++.+.+.
T Consensus 104 ~~P~y~~~---~~~~l~~~f~~ia~a 126 (292)
T 3daq_A 104 ITPYYNKT---NQRGLVKHFEAIADA 126 (292)
T ss_dssp ECCCSSCC---CHHHHHHHHHHHHHH
T ss_pred CCCCCCCC---CHHHHHHHHHHHHHh
Confidence 99987642 456666666655543
No 202
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=95.93 E-value=0.031 Score=55.23 Aligned_cols=68 Identities=25% Similarity=0.205 Sum_probs=49.9
Q ss_pred cccCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEc
Q 018519 215 KGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 293 (354)
Q Consensus 215 ~Gi~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~ig 293 (354)
.||.+++|++++.++ +|++.|.. .+-.....-..+.++.. +++.| .||++.+|+..+..+|||++++=
T Consensus 215 sGI~t~edv~~~~~~-a~avLVGe----almr~~d~~~~~~~l~~---~~~KI---CGit~~eda~~a~~~Gad~iGfI 282 (452)
T 1pii_A 215 SGINTYAQVRELSHF-ANGFLIGS----ALMAHDDLHAAVRRVLL---GENKV---CGLTRGQDAKAAYDAGAIYGGLI 282 (452)
T ss_dssp SCCCCHHHHHHHTTT-CSEEEECH----HHHTCSCHHHHHHHHHH---CSCEE---CCCCSHHHHHHHHHHTCSEEEEE
T ss_pred CCCCCHHHHHHHHHh-CCEEEEcH----HHcCCcCHHHHHHHHHH---Hhccc---cCCCcHHHHHHHHhcCCCEEEee
Confidence 499999999999999 99999922 12122333445555543 23333 68999999999999999999875
No 203
>1vpx_A Protein (transaldolase (EC 2.2.1.2)); TM0295, structural genomics, JOI for structural genomics, JCSG; HET: GOL; 2.40A {Thermotoga maritima} SCOP: c.1.10.1
Probab=95.90 E-value=0.19 Score=45.12 Aligned_cols=99 Identities=20% Similarity=0.220 Sum_probs=71.0
Q ss_pred ccCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHh---cCCccEEEcCCCCCHHHHHHHHHcCcCEEEE
Q 018519 216 GVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAT---QGRIPVFLDGGVRRGTDVFKALALGASGIFI 292 (354)
Q Consensus 216 Gi~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~---~~~i~vi~~GGi~~g~dv~kalalGAd~V~i 292 (354)
-|.+.+.|..+.++|++.|.. .-||-.+++.+....+.++++.. +-+..|++.+ +|++.++.++...|+|.+-+
T Consensus 120 liFS~~QA~laa~AGa~~iSp--FVgRidd~g~dG~~~v~~i~~~~~~~~~~t~iL~AS-~r~~~~v~~~~l~G~d~~Ti 196 (230)
T 1vpx_A 120 LVFSPAQAILAAKAGATYVSP--FVGRMDDLSNDGMRMLGEIVEIYNNYGFETEIIAAS-IRHPMHVVEAALMGVDIVTM 196 (230)
T ss_dssp EECSHHHHHHHHHHTCSEEEE--BHHHHHHTTSCHHHHHHHHHHHHHHHTCSCEEEEBS-CCSHHHHHHHHHHTCSEEEE
T ss_pred EeCCHHHHHHHHhCCCeEEEe--ccchhhhccccHHHHHHHHHHHHHHcCCCeEEEeec-cCCHHHHHHHHHhCCCEEEC
Confidence 467999999999999997755 44454445556666666666554 2256677765 99999999999999999888
Q ss_pred cHHHHHHHhhcC--HHHHHHHHHHHHH
Q 018519 293 GRPVVYSLAAEG--EKGVRRVLEMLRE 317 (354)
Q Consensus 293 gr~~l~~~~~~G--~~gv~~~l~~l~~ 317 (354)
.-.++..+...+ .+|++++.+.+.+
T Consensus 197 p~~~l~~l~~h~lt~~gv~~F~~d~~~ 223 (230)
T 1vpx_A 197 PFAVLEKLFKHPMTDLGIERFMEDWKK 223 (230)
T ss_dssp CHHHHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 888887775433 3555555555544
No 204
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=95.90 E-value=0.24 Score=47.50 Aligned_cols=122 Identities=22% Similarity=0.082 Sum_probs=80.9
Q ss_pred CChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCcc
Q 018519 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (354)
Q Consensus 133 ~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (354)
.+++.+.+.++++.+.||+++.+++++. .+.. ...+.++.+...+.++
T Consensus 146 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~-----~~~~---------------------------~e~v~avr~a~gd~~l 193 (384)
T 2pgw_A 146 ETAEELARDAAVGHAQGERVFYLKVGRG-----EKLD---------------------------LEITAAVRGEIGDARL 193 (384)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEECCSC-----HHHH---------------------------HHHHHHHHTTSTTCEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECcCCC-----HHHH---------------------------HHHHHHHHHHcCCcEE
Confidence 5778888888888999999999998751 1100 0011222222111111
Q ss_pred --cccccCCHHHH----HHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcC
Q 018519 213 --SWKGVLTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG 286 (354)
Q Consensus 213 --~w~Gi~~~~~a----~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalG 286 (354)
...+-.+.+++ +.+.+.|++.|- |. ..+..++.+.++++.+ ++||++++.+.+..|+.+++..|
T Consensus 194 ~vD~n~~~~~~~a~~~~~~l~~~~i~~iE-------qP-~~~~~~~~~~~l~~~~--~iPI~~de~i~~~~~~~~~i~~~ 263 (384)
T 2pgw_A 194 RLDANEGWSVHDAINMCRKLEKYDIEFIE-------QP-TVSWSIPAMAHVREKV--GIPIVADQAAFTLYDVYEICRQR 263 (384)
T ss_dssp EEECTTCCCHHHHHHHHHHHGGGCCSEEE-------CC-SCTTCHHHHHHHHHHC--SSCEEESTTCCSHHHHHHHHHTT
T ss_pred EEecCCCCCHHHHHHHHHHHHhcCCCEEe-------CC-CChhhHHHHHHHHhhC--CCCEEEeCCcCCHHHHHHHHHcC
Confidence 11122345554 456678998875 11 1344688888888877 89999999999999999999987
Q ss_pred -cCEEEEcHHH
Q 018519 287 -ASGIFIGRPV 296 (354)
Q Consensus 287 -Ad~V~igr~~ 296 (354)
+|.|++....
T Consensus 264 ~~d~v~ik~~~ 274 (384)
T 2pgw_A 264 AADMICIGPRE 274 (384)
T ss_dssp CCSEEEECHHH
T ss_pred CCCEEEEcchh
Confidence 8999997644
No 205
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=95.83 E-value=0.032 Score=52.25 Aligned_cols=93 Identities=15% Similarity=0.229 Sum_probs=60.4
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcCh---HHHHHHHHHHhcCCccEEEcCCCCCHHHHHH----HHHcCcCEEEE
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPAT---IMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFI 292 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~---~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~k----alalGAd~V~i 292 (354)
.+.+..+++.|+|+|++.|+-|-. ...+. .+.+..+++.+++++|||+--|=.+-.++++ |-.+|||++++
T Consensus 40 ~~lv~~li~~Gv~gl~v~GttGE~--~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Gadavlv 117 (304)
T 3cpr_A 40 REVAAYLVDKGLDSLVLAGTTGES--PTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGADGLLV 117 (304)
T ss_dssp HHHHHHHHHTTCCEEEESSTTTTT--TTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEECccccCh--hhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 345567788999999997664421 12222 2345556666777899987666555555553 34489999999
Q ss_pred cHHHHHHHhhcCHHHHHHHHHHHHH
Q 018519 293 GRPVVYSLAAEGEKGVRRVLEMLRE 317 (354)
Q Consensus 293 gr~~l~~~~~~G~~gv~~~l~~l~~ 317 (354)
-.|+++.. .++++.++++.+.+
T Consensus 118 ~~P~y~~~---~~~~l~~~f~~ia~ 139 (304)
T 3cpr_A 118 VTPYYSKP---SQEGLLAHFGAIAA 139 (304)
T ss_dssp ECCCSSCC---CHHHHHHHHHHHHH
T ss_pred CCCCCCCC---CHHHHHHHHHHHHH
Confidence 99976532 45666666655554
No 206
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=95.80 E-value=0.0089 Score=54.80 Aligned_cols=68 Identities=16% Similarity=0.156 Sum_probs=55.4
Q ss_pred CHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHH
Q 018519 219 TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 297 (354)
Q Consensus 219 ~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l 297 (354)
..+.|+...+.|++.+.+-.-.+ ...+.+.++.+.+ .+||.+.|||++- |+.+.+ +||+-|.+|+..+
T Consensus 40 p~~~A~~~~~~Ga~~l~vvDL~~-------~n~~~i~~i~~~~--~~pv~vgGGir~~-~~~~~l-~Ga~~Viigs~a~ 107 (260)
T 2agk_A 40 SSYYAKLYKDRDVQGCHVIKLGP-------NNDDAAREALQES--PQFLQVGGGINDT-NCLEWL-KWASKVIVTSWLF 107 (260)
T ss_dssp HHHHHHHHHHTTCTTCEEEEESS-------SCHHHHHHHHHHS--TTTSEEESSCCTT-THHHHT-TTCSCEEECGGGB
T ss_pred HHHHHHHHHHcCCCEEEEEeCCC-------CCHHHHHHHHhcC--CceEEEeCCCCHH-HHHHHh-cCCCEEEECcHHH
Confidence 45788999999999988722111 4577888888877 7999999999986 999999 9999999999654
No 207
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=95.73 E-value=0.027 Score=52.53 Aligned_cols=93 Identities=18% Similarity=0.268 Sum_probs=60.7
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcCh---HHHHHHHHHHhcCCccEEEcCCCCCHHHHHH----HHHcCcCEEEE
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPAT---IMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFI 292 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~---~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~k----alalGAd~V~i 292 (354)
.+.+..+++.|+|+|++.|+-|-. ...+. .+.+..+++.+++++|||+--|=.+-.++++ |-.+|||++++
T Consensus 31 ~~lv~~li~~Gv~gl~~~GttGE~--~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv 108 (297)
T 3flu_A 31 RDLIDWHIENGTDGIVAVGTTGES--ATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLS 108 (297)
T ss_dssp HHHHHHHHHTTCCEEEESSTTTTG--GGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEeCccccCc--ccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEE
Confidence 345667789999999997664421 11222 2345555666777899998666556666553 34589999999
Q ss_pred cHHHHHHHhhcCHHHHHHHHHHHHH
Q 018519 293 GRPVVYSLAAEGEKGVRRVLEMLRE 317 (354)
Q Consensus 293 gr~~l~~~~~~G~~gv~~~l~~l~~ 317 (354)
-.|+++.. .++++.++++.+.+
T Consensus 109 ~~P~y~~~---~~~~l~~~f~~va~ 130 (297)
T 3flu_A 109 VVPYYNKP---SQEGIYQHFKTIAE 130 (297)
T ss_dssp ECCCSSCC---CHHHHHHHHHHHHH
T ss_pred CCCCCCCC---CHHHHHHHHHHHHH
Confidence 99987632 45666656555544
No 208
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=95.71 E-value=0.027 Score=52.68 Aligned_cols=93 Identities=15% Similarity=0.292 Sum_probs=59.8
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcCh---HHHHHHHHHHhcCCccEEEcCCCCCHHHHHH----HHHcCcCEEEE
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPAT---IMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFI 292 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~---~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~k----alalGAd~V~i 292 (354)
.+.++.+++.|+|+|++.|+-|-. ...+. .+.+..+++.+++++|||+--|=.+-.++++ |-.+|||++++
T Consensus 36 ~~lv~~li~~Gv~gl~v~GtTGE~--~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv 113 (301)
T 1xky_A 36 TKLVNYLIDNGTTAIVVGGTTGES--PTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVDAVML 113 (301)
T ss_dssp HHHHHHHHHTTCCEEEESSTTTTG--GGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEECccccCh--hhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 355667789999999996654421 11222 2345555666677899987666555555553 34489999999
Q ss_pred cHHHHHHHhhcCHHHHHHHHHHHHH
Q 018519 293 GRPVVYSLAAEGEKGVRRVLEMLRE 317 (354)
Q Consensus 293 gr~~l~~~~~~G~~gv~~~l~~l~~ 317 (354)
-.|+++.. .++++.++++.+.+
T Consensus 114 ~~P~y~~~---s~~~l~~~f~~va~ 135 (301)
T 1xky_A 114 VAPYYNKP---SQEGMYQHFKAIAE 135 (301)
T ss_dssp ECCCSSCC---CHHHHHHHHHHHHH
T ss_pred cCCCCCCC---CHHHHHHHHHHHHH
Confidence 99987632 45666555555443
No 209
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=95.69 E-value=0.31 Score=42.69 Aligned_cols=72 Identities=8% Similarity=-0.016 Sum_probs=51.3
Q ss_pred CHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHH
Q 018519 219 TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRP 295 (354)
Q Consensus 219 ~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~ 295 (354)
+.+.+..+.++|+|.|.++..-. .+......+.+.++++.++ ..+++. ++.+..++.++..+|+|.++++.+
T Consensus 77 ~~~~i~~~~~~Gad~v~l~~~~~--~~p~~~~~~~i~~~~~~~~-~~~v~~--~~~t~~e~~~~~~~G~d~i~~~~~ 148 (223)
T 1y0e_A 77 TSKEVDELIESQCEVIALDATLQ--QRPKETLDELVSYIRTHAP-NVEIMA--DIATVEEAKNAARLGFDYIGTTLH 148 (223)
T ss_dssp SHHHHHHHHHHTCSEEEEECSCS--CCSSSCHHHHHHHHHHHCT-TSEEEE--ECSSHHHHHHHHHTTCSEEECTTT
T ss_pred cHHHHHHHHhCCCCEEEEeeecc--cCcccCHHHHHHHHHHhCC-CceEEe--cCCCHHHHHHHHHcCCCEEEeCCC
Confidence 56788899999999999843211 0000233566777777663 566665 578999999999999999988654
No 210
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=95.67 E-value=0.022 Score=53.46 Aligned_cols=96 Identities=15% Similarity=0.198 Sum_probs=59.5
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcCh---HHHHHHHHHHhcCCccEEEcCCCCCHHHHH----HHHHcCcCEEEE
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPAT---IMALEEVVKATQGRIPVFLDGGVRRGTDVF----KALALGASGIFI 292 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~---~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~----kalalGAd~V~i 292 (354)
.+.+..+++.|+|+|++.|+-|-. ...+. .+.+..+++.+++++|||+--|=.+-.+++ .|-.+|||++++
T Consensus 32 ~~lv~~li~~Gv~gl~v~GtTGE~--~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv 109 (309)
T 3fkr_A 32 KRAVDFMIDAGSDGLCILANFSEQ--FAITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMA 109 (309)
T ss_dssp HHHHHHHHHTTCSCEEESSGGGTG--GGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEECccccCc--ccCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHHHHcCCCEEEE
Confidence 345567789999999996654421 11222 234555566667789999865555555554 334489999999
Q ss_pred cHHHHHHHhhcCHHHHHHHHHHHHH
Q 018519 293 GRPVVYSLAAEGEKGVRRVLEMLRE 317 (354)
Q Consensus 293 gr~~l~~~~~~G~~gv~~~l~~l~~ 317 (354)
-.|+.+....-.++++.++++.+.+
T Consensus 110 ~~Pyy~~~~~~s~~~l~~~f~~va~ 134 (309)
T 3fkr_A 110 MPPYHGATFRVPEAQIFEFYARVSD 134 (309)
T ss_dssp CCSCBTTTBCCCHHHHHHHHHHHHH
T ss_pred cCCCCccCCCCCHHHHHHHHHHHHH
Confidence 9996521111245666666555544
No 211
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=95.64 E-value=0.044 Score=50.50 Aligned_cols=73 Identities=21% Similarity=0.136 Sum_probs=58.1
Q ss_pred CHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHH
Q 018519 219 TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 297 (354)
Q Consensus 219 ~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l 297 (354)
..+.|+...+.||++|.|-.-.+. .. ...+.|..+++.+ ++||+.-..|.+..++.++.++|||+|.++...+
T Consensus 81 p~~~A~~y~~~GA~~IsVltd~~~--f~--Gs~~~L~~ir~~v--~lPVl~Kdfi~d~~qi~ea~~~GAD~VlLi~a~L 153 (272)
T 3tsm_A 81 PPALAKAYEEGGAACLSVLTDTPS--FQ--GAPEFLTAARQAC--SLPALRKDFLFDPYQVYEARSWGADCILIIMASV 153 (272)
T ss_dssp HHHHHHHHHHTTCSEEEEECCSTT--TC--CCHHHHHHHHHTS--SSCEEEESCCCSTHHHHHHHHTTCSEEEEETTTS
T ss_pred HHHHHHHHHHCCCCEEEEeccccc--cC--CCHHHHHHHHHhc--CCCEEECCccCCHHHHHHHHHcCCCEEEEccccc
Confidence 457889999999999988432211 11 2466788888877 8999999999999999999999999999997543
No 212
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=95.63 E-value=0.027 Score=52.37 Aligned_cols=94 Identities=13% Similarity=0.191 Sum_probs=61.6
Q ss_pred HHHHHHHHH-hCCCEEEEecCCcCCCCCCcCh---HHHHHHHHHHhcCCccEEEcCCCCCHHHHHH----HHHcCcCEEE
Q 018519 220 AEDARIAVQ-AGAAGIIVSNHGARQLDYVPAT---IMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIF 291 (354)
Q Consensus 220 ~~~a~~~~~-~G~d~I~vs~~gg~~~~~~~~~---~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~k----alalGAd~V~ 291 (354)
.+.+..+++ .|+|+|++.|+-|-. ...+. .+.+..+++.+++++|||+--|=.+-.++++ |-.+|||+++
T Consensus 27 ~~lv~~li~~~Gv~gl~~~GttGE~--~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavl 104 (293)
T 1f6k_A 27 RQIIRHNIDKMKVDGLYVGGSTGEN--FMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLS 104 (293)
T ss_dssp HHHHHHHHHTSCCSEEEESSGGGTG--GGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHhhCCCcEEEeCccccch--hhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 345667788 999999996654421 11222 2345556666777899987666656666653 3348999999
Q ss_pred EcHHHHHHHhhcCHHHHHHHHHHHHHH
Q 018519 292 IGRPVVYSLAAEGEKGVRRVLEMLREE 318 (354)
Q Consensus 292 igr~~l~~~~~~G~~gv~~~l~~l~~e 318 (354)
+-.|+++.. .++++.++++.+.+.
T Consensus 105 v~~P~y~~~---~~~~l~~~f~~va~a 128 (293)
T 1f6k_A 105 AVTPFYYKF---SFPEIKHYYDTIIAE 128 (293)
T ss_dssp EECCCSSCC---CHHHHHHHHHHHHHH
T ss_pred ECCCCCCCC---CHHHHHHHHHHHHHh
Confidence 999987642 456666666665543
No 213
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=95.62 E-value=0.046 Score=50.78 Aligned_cols=93 Identities=15% Similarity=0.302 Sum_probs=61.3
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcCh---HHHHHHHHHHhcCCccEEEcCCCCCHHHHHH----HHHcCcCEEEE
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPAT---IMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFI 292 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~---~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~k----alalGAd~V~i 292 (354)
...+..+++.|+|+|++.|+-|-. ...+. .+.+..+++.+++++|||+--|=.+-.++++ |-.+|||++++
T Consensus 25 ~~lv~~li~~Gv~gl~~~GttGE~--~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv 102 (291)
T 3tak_A 25 EKLVEWHIEQGTNSIVAVGTTGEA--STLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGADAALL 102 (291)
T ss_dssp HHHHHHHHHHTCCEEEESSTTTTG--GGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHCCCCEEEECcccccc--ccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 345667789999999996654421 11222 2345555666677899998666556666653 44589999999
Q ss_pred cHHHHHHHhhcCHHHHHHHHHHHHH
Q 018519 293 GRPVVYSLAAEGEKGVRRVLEMLRE 317 (354)
Q Consensus 293 gr~~l~~~~~~G~~gv~~~l~~l~~ 317 (354)
-.|+++.. .++++.++++.+.+
T Consensus 103 ~~P~y~~~---~~~~l~~~f~~ia~ 124 (291)
T 3tak_A 103 VTPYYNKP---TQEGLYQHYKAIAE 124 (291)
T ss_dssp ECCCSSCC---CHHHHHHHHHHHHH
T ss_pred cCCCCCCC---CHHHHHHHHHHHHH
Confidence 99987632 45666666655544
No 214
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=95.57 E-value=0.032 Score=51.75 Aligned_cols=92 Identities=20% Similarity=0.346 Sum_probs=59.1
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCCCcCh---HHHHHHHHHHhcCCccEEEcCCCCCHHHHHH----HHHcCcCEEEEc
Q 018519 221 EDARIAVQAGAAGIIVSNHGARQLDYVPAT---IMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIG 293 (354)
Q Consensus 221 ~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~---~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~k----alalGAd~V~ig 293 (354)
+.+..+++.|+|+|++.|+-|-. ...+. .+.+..+++.+++++|||+--|=.+-.++++ |-.+|||++++-
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~--~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~ 102 (289)
T 2yxg_A 25 ENINFLIENGVSGIVAVGTTGES--PTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSI 102 (289)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTG--GGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHCCCCEEEECccccCh--hhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEC
Confidence 45566789999999996664421 11222 2345555666677899987655555555543 334899999999
Q ss_pred HHHHHHHhhcCHHHHHHHHHHHHH
Q 018519 294 RPVVYSLAAEGEKGVRRVLEMLRE 317 (354)
Q Consensus 294 r~~l~~~~~~G~~gv~~~l~~l~~ 317 (354)
.|+++.. .++++.++++.+.+
T Consensus 103 ~P~y~~~---s~~~l~~~f~~ia~ 123 (289)
T 2yxg_A 103 TPYYNKP---TQEGLRKHFGKVAE 123 (289)
T ss_dssp CCCSSCC---CHHHHHHHHHHHHH
T ss_pred CCCCCCC---CHHHHHHHHHHHHH
Confidence 9987632 45666656555544
No 215
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=95.54 E-value=0.047 Score=51.03 Aligned_cols=95 Identities=16% Similarity=0.221 Sum_probs=62.2
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcCh---HHHHHHHHHHhcCCccEEEcCCCCCHHHHHH----HHHcCcCEEEE
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPAT---IMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFI 292 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~---~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~k----alalGAd~V~i 292 (354)
.+.+..+++.|+|+|++.|+-|-. ...+. .+.+..+++.+++++|||+--|=.+-.++++ |-.+|||++++
T Consensus 35 ~~lv~~li~~Gv~Gl~v~GtTGE~--~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv 112 (303)
T 2wkj_A 35 RRLVQFNIQQGIDGLYVGGSTGEA--FVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSA 112 (303)
T ss_dssp HHHHHHHHHTTCSEEEESSTTTTG--GGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEECeeccCh--hhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEe
Confidence 345667789999999996654421 11222 2345555666677899987555545555543 33489999999
Q ss_pred cHHHHHHHhhcCHHHHHHHHHHHHHHH
Q 018519 293 GRPVVYSLAAEGEKGVRRVLEMLREEF 319 (354)
Q Consensus 293 gr~~l~~~~~~G~~gv~~~l~~l~~el 319 (354)
-.|+++.. .++++.++++.+.+..
T Consensus 113 ~~P~y~~~---s~~~l~~~f~~va~a~ 136 (303)
T 2wkj_A 113 VTPFYYPF---SFEEHCDHYRAIIDSA 136 (303)
T ss_dssp ECCCSSCC---CHHHHHHHHHHHHHHH
T ss_pred cCCCCCCC---CHHHHHHHHHHHHHhC
Confidence 99987642 5677777777666543
No 216
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=95.53 E-value=0.03 Score=53.08 Aligned_cols=93 Identities=12% Similarity=0.052 Sum_probs=59.5
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcCh---HHHHHHHHHHhcCCccEEEcCCCCCHHHHHH----HHHcCcCEEEE
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPAT---IMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFI 292 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~---~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~k----alalGAd~V~i 292 (354)
...+..+++.|+|+|++.|+-|-. ...+. .+.+..+++.+++++|||+--|=.+-.++++ |-.+|||+|++
T Consensus 58 ~~lv~~li~~Gv~Gl~v~GtTGE~--~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv 135 (332)
T 2r8w_A 58 SALIARLDAAEVDSVGILGSTGIY--MYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAGADALLL 135 (332)
T ss_dssp HHHHHHHHHHTCSEEEESSTTTTG--GGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEECccccCh--hhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 345567789999999997664421 11222 2345555666777899987544444455542 33489999999
Q ss_pred cHHHHHHHhhcCHHHHHHHHHHHHH
Q 018519 293 GRPVVYSLAAEGEKGVRRVLEMLRE 317 (354)
Q Consensus 293 gr~~l~~~~~~G~~gv~~~l~~l~~ 317 (354)
-.|+++. -.++++.++++.+.+
T Consensus 136 ~~P~Y~~---~s~~~l~~~f~~VA~ 157 (332)
T 2r8w_A 136 APVSYTP---LTQEEAYHHFAAVAG 157 (332)
T ss_dssp CCCCSSC---CCHHHHHHHHHHHHH
T ss_pred CCCCCCC---CCHHHHHHHHHHHHH
Confidence 9998764 245666666655554
No 217
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=95.51 E-value=0.027 Score=52.50 Aligned_cols=96 Identities=15% Similarity=0.167 Sum_probs=61.9
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcCh---HHHHHHHHHHhcCCccEEEcCCCCCHHHHHH----HHHcCcCEEEE
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPAT---IMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFI 292 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~---~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~k----alalGAd~V~i 292 (354)
.+.+..+++.|+|+|++.|+-|-. ...+. .+.+..+++.+++++|||+--|=.+-.++++ |-.+|||++++
T Consensus 27 ~~lv~~li~~Gv~gl~~~GttGE~--~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv 104 (294)
T 3b4u_A 27 IAHARRCLSNGCDSVTLFGTTGEG--CSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGARNILL 104 (294)
T ss_dssp HHHHHHHHHTTCSEEEESSTTTTG--GGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEECccccCh--hhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcCCCEEEE
Confidence 355667789999999997664421 11222 2345555566667899986655555555543 33489999999
Q ss_pred cHHHHHHHhhcCHHHHHHHHHHHHHHH
Q 018519 293 GRPVVYSLAAEGEKGVRRVLEMLREEF 319 (354)
Q Consensus 293 gr~~l~~~~~~G~~gv~~~l~~l~~el 319 (354)
-.|+++. ...++++.++++.+.+..
T Consensus 105 ~~P~y~~--~~s~~~l~~~f~~va~a~ 129 (294)
T 3b4u_A 105 APPSYFK--NVSDDGLFAWFSAVFSKI 129 (294)
T ss_dssp CCCCSSC--SCCHHHHHHHHHHHHHHH
T ss_pred cCCcCCC--CCCHHHHHHHHHHHHHhc
Confidence 9998764 015677777776666544
No 218
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=95.51 E-value=0.031 Score=52.06 Aligned_cols=92 Identities=20% Similarity=0.260 Sum_probs=59.1
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCCCcCh---HHHHHHHHHHhcCCccEEEcCCCCCHHHHHH----HHHcCcCEEEEc
Q 018519 221 EDARIAVQAGAAGIIVSNHGARQLDYVPAT---IMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIG 293 (354)
Q Consensus 221 ~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~---~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~k----alalGAd~V~ig 293 (354)
+.+..+++.|+|+|++.|+-|-. ...+. .+.+..+++.+++++|||+--|=.+-.++++ |-.+|||++++-
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~--~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~ 102 (294)
T 2ehh_A 25 NLIEFHVDNGTDAILVCGTTGES--PTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVV 102 (294)
T ss_dssp HHHHHHHTTTCCEEEESSTTTTG--GGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHCCCCEEEECccccCh--hhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEEC
Confidence 45566788999999997664421 11222 2345555666677899987666555555553 334899999999
Q ss_pred HHHHHHHhhcCHHHHHHHHHHHHH
Q 018519 294 RPVVYSLAAEGEKGVRRVLEMLRE 317 (354)
Q Consensus 294 r~~l~~~~~~G~~gv~~~l~~l~~ 317 (354)
.|+++.. .++++.++++.+.+
T Consensus 103 ~P~y~~~---s~~~l~~~f~~va~ 123 (294)
T 2ehh_A 103 VPYYNKP---TQRGLYEHFKTVAQ 123 (294)
T ss_dssp CCCSSCC---CHHHHHHHHHHHHH
T ss_pred CCCCCCC---CHHHHHHHHHHHHH
Confidence 9987632 45666555555544
No 219
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=95.50 E-value=0.02 Score=53.87 Aligned_cols=93 Identities=14% Similarity=0.150 Sum_probs=60.6
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcCh---HHHHHHHHHHhcCCccEEEcCCCCCHHHHHH----HHHcCcCEEEE
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPAT---IMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFI 292 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~---~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~k----alalGAd~V~i 292 (354)
...+..+++.|+|+|++.|+-|-. ...+. .+.+..+++.+++++|||+--|=.+-.|+++ |-.+|||++++
T Consensus 48 ~~lv~~li~~Gv~Gi~v~GtTGE~--~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv 125 (315)
T 3na8_A 48 GRSIERLIDGGVHAIAPLGSTGEG--AYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMV 125 (315)
T ss_dssp HHHHHHHHHTTCSEEECSSGGGTG--GGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEECccccCh--hhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 345567789999999996654421 11222 2345555666677899988666556666553 44589999999
Q ss_pred cHHHHHHHhhcCHHHHHHHHHHHHH
Q 018519 293 GRPVVYSLAAEGEKGVRRVLEMLRE 317 (354)
Q Consensus 293 gr~~l~~~~~~G~~gv~~~l~~l~~ 317 (354)
-.|+++.. .++++.++++.+.+
T Consensus 126 ~~P~y~~~---s~~~l~~~f~~va~ 147 (315)
T 3na8_A 126 LPISYWKL---NEAEVFQHYRAVGE 147 (315)
T ss_dssp CCCCSSCC---CHHHHHHHHHHHHH
T ss_pred CCCCCCCC---CHHHHHHHHHHHHH
Confidence 99987642 45666655555544
No 220
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=95.50 E-value=0.035 Score=53.40 Aligned_cols=70 Identities=16% Similarity=0.258 Sum_probs=52.8
Q ss_pred CCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEc
Q 018519 218 LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 293 (354)
Q Consensus 218 ~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~ig 293 (354)
...+.+..+.++|+|.|+|+...|+ .....+.+.++++..+ +++|++ |.+.|.+++.++..+|||+|.+|
T Consensus 108 ~~~~~~~~lieaGvd~I~idta~G~----~~~~~~~I~~ik~~~p-~v~Vi~-G~v~t~e~A~~a~~aGAD~I~vG 177 (366)
T 4fo4_A 108 GNEERVKALVEAGVDVLLIDSSHGH----SEGVLQRIRETRAAYP-HLEIIG-GNVATAEGARALIEAGVSAVKVG 177 (366)
T ss_dssp TCHHHHHHHHHTTCSEEEEECSCTT----SHHHHHHHHHHHHHCT-TCEEEE-EEECSHHHHHHHHHHTCSEEEEC
T ss_pred hHHHHHHHHHhCCCCEEEEeCCCCC----CHHHHHHHHHHHHhcC-CCceEe-eeeCCHHHHHHHHHcCCCEEEEe
Confidence 3578899999999999998543332 1223455667776653 577776 67999999999999999999995
No 221
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=95.49 E-value=0.039 Score=51.68 Aligned_cols=92 Identities=22% Similarity=0.307 Sum_probs=60.1
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcCh---HHHHHHHHHHhcCCccEEEcCCCCCHHHHHH----HHHcCcCEEEE
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPAT---IMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFI 292 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~---~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~k----alalGAd~V~i 292 (354)
.+.+..+++.|+|+|++.|+-|-. ...+. .+.+..+++.+++++|||+--|=.+-.++++ |-.+|||+|++
T Consensus 39 ~~lv~~li~~Gv~gi~v~GttGE~--~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv 116 (304)
T 3l21_A 39 ARLANHLVDQGCDGLVVSGTTGES--PTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLV 116 (304)
T ss_dssp HHHHHHHHHTTCSEEEESSTTTTG--GGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEeCccccch--hhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 345667789999999996654421 11222 2345556666777899998766566666653 33489999999
Q ss_pred cHHHHHHHhhcCHHHHHHHHHHHH
Q 018519 293 GRPVVYSLAAEGEKGVRRVLEMLR 316 (354)
Q Consensus 293 gr~~l~~~~~~G~~gv~~~l~~l~ 316 (354)
-.|+++.. .++++.++++.+.
T Consensus 117 ~~P~y~~~---s~~~l~~~f~~va 137 (304)
T 3l21_A 117 VTPYYSKP---PQRGLQAHFTAVA 137 (304)
T ss_dssp ECCCSSCC---CHHHHHHHHHHHH
T ss_pred CCCCCCCC---CHHHHHHHHHHHH
Confidence 99987642 4555555554443
No 222
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=95.43 E-value=0.05 Score=51.13 Aligned_cols=93 Identities=20% Similarity=0.306 Sum_probs=61.0
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcCh---HHHHHHHHHHhcCCccEEEcCCCCCHHHHHH----HHHcCcCEEEE
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPAT---IMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFI 292 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~---~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~k----alalGAd~V~i 292 (354)
.+.+..+++.|+|+|++.|+-|-. ...+. .+.+..+++.+++++|||+--|=.+-.++++ |-.+|||++++
T Consensus 47 ~~lv~~li~~Gv~Gl~v~GtTGE~--~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv 124 (314)
T 3qze_A 47 AKLVDFHLQEGTNAIVAVGTTGES--ATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLL 124 (314)
T ss_dssp HHHHHHHHHHTCCEEEESSGGGTG--GGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEECccccCh--hhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEE
Confidence 345566789999999996654421 11222 2345555666777899998666556666653 34589999999
Q ss_pred cHHHHHHHhhcCHHHHHHHHHHHHH
Q 018519 293 GRPVVYSLAAEGEKGVRRVLEMLRE 317 (354)
Q Consensus 293 gr~~l~~~~~~G~~gv~~~l~~l~~ 317 (354)
-.|+++.. .++++.++++.+.+
T Consensus 125 ~~P~y~~~---s~~~l~~~f~~va~ 146 (314)
T 3qze_A 125 VTPYYNKP---TQEGMYQHFRHIAE 146 (314)
T ss_dssp ECCCSSCC---CHHHHHHHHHHHHH
T ss_pred cCCCCCCC---CHHHHHHHHHHHHH
Confidence 99987632 45666666655544
No 223
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=95.40 E-value=0.031 Score=52.09 Aligned_cols=93 Identities=17% Similarity=0.271 Sum_probs=59.9
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcCh---HHHHHHHHHHhcCCccEEEcCCCCCHHHHHH----HHHcCcCEEEE
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPAT---IMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFI 292 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~---~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~k----alalGAd~V~i 292 (354)
.+.+..+++.|+|+|++.|+-|-. ...+. .+.+..+++.+++++|||+--|=.+-.++++ |-.+|||++++
T Consensus 24 ~~lv~~li~~Gv~gi~v~GttGE~--~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv 101 (297)
T 2rfg_A 24 AGLVDWQIKHGAHGLVPVGTTGES--PTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLC 101 (297)
T ss_dssp HHHHHHHHHTTCSEEECSSGGGTG--GGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEECccccch--hhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 345667789999999996654421 11222 2345555666677899886655555555543 33489999999
Q ss_pred cHHHHHHHhhcCHHHHHHHHHHHHH
Q 018519 293 GRPVVYSLAAEGEKGVRRVLEMLRE 317 (354)
Q Consensus 293 gr~~l~~~~~~G~~gv~~~l~~l~~ 317 (354)
-.|+++.. .++++.++++.+.+
T Consensus 102 ~~P~y~~~---s~~~l~~~f~~va~ 123 (297)
T 2rfg_A 102 VAGYYNRP---SQEGLYQHFKMVHD 123 (297)
T ss_dssp CCCTTTCC---CHHHHHHHHHHHHH
T ss_pred cCCCCCCC---CHHHHHHHHHHHHH
Confidence 99987642 45666666665554
No 224
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=95.38 E-value=0.045 Score=51.52 Aligned_cols=93 Identities=14% Similarity=0.224 Sum_probs=61.1
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcCh---HHHHHHHHHHhcCCccEEEcCCCCCHHHHHH----HHHcCcCEEEE
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPAT---IMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFI 292 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~---~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~k----alalGAd~V~i 292 (354)
.+.+..+++.|+|+|++.|+-|-. ...+. .+.+..+++.+++++|||+--|=.+-.++++ |-.+|||++++
T Consensus 46 ~~li~~li~~Gv~Gl~v~GtTGE~--~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv 123 (315)
T 3si9_A 46 CNFVEWQITQGINGVSPVGTTGES--PTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLV 123 (315)
T ss_dssp HHHHHHHHHTTCSEEECSSTTTTG--GGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEeCccccCc--cccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 345567789999999996654421 11222 2345556666777899988666556666663 44589999999
Q ss_pred cHHHHHHHhhcCHHHHHHHHHHHHH
Q 018519 293 GRPVVYSLAAEGEKGVRRVLEMLRE 317 (354)
Q Consensus 293 gr~~l~~~~~~G~~gv~~~l~~l~~ 317 (354)
-.|+++.. .++++.++++.+.+
T Consensus 124 ~~P~y~~~---~~~~l~~~f~~va~ 145 (315)
T 3si9_A 124 VTPYYNRP---NQRGLYTHFSSIAK 145 (315)
T ss_dssp ECCCSSCC---CHHHHHHHHHHHHH
T ss_pred CCCCCCCC---CHHHHHHHHHHHHH
Confidence 99987632 45666666555544
No 225
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=95.37 E-value=0.031 Score=51.96 Aligned_cols=92 Identities=14% Similarity=0.212 Sum_probs=59.1
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcCh---HHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHH----HcCcCEEEE
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPAT---IMALEEVVKATQGRIPVFLDGGVRRGTDVFKAL----ALGASGIFI 292 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~---~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kal----alGAd~V~i 292 (354)
.+.+..+++.|+|+|++.|+-|-. ...+. .+.+..+++.+++++|||+--|=.+-.++++.. .+|||++++
T Consensus 25 ~~lv~~li~~Gv~gl~~~GttGE~--~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv 102 (292)
T 2ojp_A 25 KKLIDYHVASGTSAIVSVGTTGES--ATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLT 102 (292)
T ss_dssp HHHHHHHHHHTCCEEEESSTTTTG--GGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEE
T ss_pred HHHHHHHHHcCCCEEEECccccch--hhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcCCCEEEE
Confidence 355667789999999997664421 11222 234555566667789998766655666665432 379999999
Q ss_pred cHHHHHHHhhcCHHHHHHHHHHHH
Q 018519 293 GRPVVYSLAAEGEKGVRRVLEMLR 316 (354)
Q Consensus 293 gr~~l~~~~~~G~~gv~~~l~~l~ 316 (354)
-.|+++.. .++++.++++.+.
T Consensus 103 ~~P~y~~~---s~~~l~~~f~~ia 123 (292)
T 2ojp_A 103 VTPYYNRP---SQEGLYQHFKAIA 123 (292)
T ss_dssp ECCCSSCC---CHHHHHHHHHHHH
T ss_pred CCCCCCCC---CHHHHHHHHHHHH
Confidence 99987532 4555555555443
No 226
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=95.36 E-value=0.049 Score=51.91 Aligned_cols=93 Identities=19% Similarity=0.309 Sum_probs=59.7
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcCh---HHHHHHHHHHhcCCccEEEcCCCCCHHHHHH----HHHcCcCEEEE
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPAT---IMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFI 292 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~---~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~k----alalGAd~V~i 292 (354)
.+.+..+++.|+|+|++.|+-|-. ...+. .+.+..+++.+++++|||+--|=.+-.++++ |-.+|||+|++
T Consensus 55 ~~lv~~li~~Gv~Gl~v~GtTGE~--~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv 132 (343)
T 2v9d_A 55 AALIDDLIKAGVDGLFFLGSGGEF--SQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVV 132 (343)
T ss_dssp HHHHHHHHHTTCSCEEESSTTTTG--GGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEeCccccCh--hhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 345567789999999996654421 11222 2345556666777899987666555555553 34489999999
Q ss_pred cHHHHHHHhhcCHHHHHHHHHHHHH
Q 018519 293 GRPVVYSLAAEGEKGVRRVLEMLRE 317 (354)
Q Consensus 293 gr~~l~~~~~~G~~gv~~~l~~l~~ 317 (354)
-.|+++.. .++++.++++.+.+
T Consensus 133 ~~P~Y~~~---s~~~l~~~f~~VA~ 154 (343)
T 2v9d_A 133 INPYYWKV---SEANLIRYFEQVAD 154 (343)
T ss_dssp ECCSSSCC---CHHHHHHHHHHHHH
T ss_pred CCCCCCCC---CHHHHHHHHHHHHH
Confidence 99987632 45565555554443
No 227
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=95.34 E-value=0.041 Score=52.77 Aligned_cols=68 Identities=26% Similarity=0.377 Sum_probs=51.8
Q ss_pred CHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEc
Q 018519 219 TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 293 (354)
Q Consensus 219 ~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~ig 293 (354)
..+.++.+.++|+|.|+|....|. .....+.+.++++.+ ++||++ |.+.+.+++.++..+|||+|.+|
T Consensus 106 ~~e~a~~l~eaGad~I~ld~a~G~----~~~~~~~i~~i~~~~--~~~Viv-g~v~t~e~A~~l~~aGaD~I~VG 173 (361)
T 3khj_A 106 EIERAKLLVEAGVDVIVLDSAHGH----SLNIIRTLKEIKSKM--NIDVIV-GNVVTEEATKELIENGADGIKVG 173 (361)
T ss_dssp CHHHHHHHHHTTCSEEEECCSCCS----BHHHHHHHHHHHHHC--CCEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHcCcCeEEEeCCCCC----cHHHHHHHHHHHHhc--CCcEEE-ccCCCHHHHHHHHHcCcCEEEEe
Confidence 478899999999999998432221 112245667777766 788887 67899999999999999999985
No 228
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=95.33 E-value=0.037 Score=52.14 Aligned_cols=95 Identities=14% Similarity=0.236 Sum_probs=58.3
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcCh---HHHHHHHHHHhcCCccEEEcCCCCCHHHHHH----HHHcCcCEEEE
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPAT---IMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFI 292 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~---~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~k----alalGAd~V~i 292 (354)
.+.+..+++.|+|+|++.|+-|-. ...+. .+.+..+++.+++++|||+--|=.+-.++++ |-.+|||++++
T Consensus 35 ~~lv~~li~~Gv~gl~v~GtTGE~--~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv 112 (318)
T 3qfe_A 35 ERYYAYLARSGLTGLVILGTNAEA--FLLTREERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDASVAGANYVLV 112 (318)
T ss_dssp HHHHHHHHTTTCSEEEESSGGGTG--GGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEeCccccCh--hhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 345667788999999997664421 11222 2345555666777899988655555665553 33489999999
Q ss_pred cHHHHHHHhhcCHHHHHHHHHHHHH
Q 018519 293 GRPVVYSLAAEGEKGVRRVLEMLRE 317 (354)
Q Consensus 293 gr~~l~~~~~~G~~gv~~~l~~l~~ 317 (354)
-.|++|.-- ..++++.++++.+.+
T Consensus 113 ~~P~y~~kp-~~~~~l~~~f~~ia~ 136 (318)
T 3qfe_A 113 LPPAYFGKA-TTPPVIKSFFDDVSC 136 (318)
T ss_dssp CCCCC---C-CCHHHHHHHHHHHHH
T ss_pred eCCcccCCC-CCHHHHHHHHHHHHh
Confidence 999766310 134566555554443
No 229
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=95.32 E-value=0.023 Score=50.96 Aligned_cols=83 Identities=17% Similarity=0.124 Sum_probs=50.6
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCH-HHHHHHHHcCcCEEEEcHHHHHH
Q 018519 221 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG-TDVFKALALGASGIFIGRPVVYS 299 (354)
Q Consensus 221 ~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g-~dv~kalalGAd~V~igr~~l~~ 299 (354)
+-++.+.++|+++++++.+ ..+.+.++++.++.+.++ ++.||+-. .+. +++..|||.+.+||++..+
T Consensus 141 ~~a~~a~~~G~~GvV~~at----------~~~e~~~ir~~~~~~~~i-v~PGI~~~g~~p-~~~~aGad~iVvGr~I~~a 208 (228)
T 3m47_A 141 EIARMGVDLGVKNYVGPST----------RPERLSRLREIIGQDSFL-ISPGVGAQGGDP-GETLRFADAIIVGRSIYLA 208 (228)
T ss_dssp HHHHHHHHTTCCEEECCSS----------CHHHHHHHHHHHCSSSEE-EECC----------CGGGTCSEEEECHHHHTS
T ss_pred HHHHHHHHhCCcEEEECCC----------ChHHHHHHHHhcCCCCEE-EecCcCcCCCCH-hHHHcCCCEEEECHHHhCC
Confidence 4567788999999886321 235567777777544555 88899753 356 8889999999999996431
Q ss_pred HhhcCHHHHHHHHHHHHHHHHH
Q 018519 300 LAAEGEKGVRRVLEMLREEFEL 321 (354)
Q Consensus 300 ~~~~G~~gv~~~l~~l~~el~~ 321 (354)
+.....++.++++++.
T Consensus 209 ------~dp~~a~~~~~~~~~~ 224 (228)
T 3m47_A 209 ------DNPAAAAAGAIESIKD 224 (228)
T ss_dssp ------SCHHHHHHHHHHHC--
T ss_pred ------CCHHHHHHHHHHHHHH
Confidence 2233456666666553
No 230
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=95.32 E-value=0.031 Score=52.36 Aligned_cols=91 Identities=19% Similarity=0.331 Sum_probs=58.1
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCCCcCh---HHHHHHHHHHhcCCccEEEcCCCCCHHHHHH----HHHcCcCEEEEc
Q 018519 221 EDARIAVQAGAAGIIVSNHGARQLDYVPAT---IMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIG 293 (354)
Q Consensus 221 ~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~---~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~k----alalGAd~V~ig 293 (354)
..++.+++.|+|+|++.|+-|-. ...+. .+.+..+++.+++++|||+--|=.+-.++++ |-.+|||++++-
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~--~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~ 114 (306)
T 1o5k_A 37 RLVRYQLENGVNALIVLGTTGES--PTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVV 114 (306)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTG--GGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHcCCCEEEeCccccch--hhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEEC
Confidence 45566789999999996664421 11222 2345556666677899987666555555553 334899999999
Q ss_pred HHHHHHHhhcCHHHHHHHHHHHH
Q 018519 294 RPVVYSLAAEGEKGVRRVLEMLR 316 (354)
Q Consensus 294 r~~l~~~~~~G~~gv~~~l~~l~ 316 (354)
.|+++.. .++++.++++.+.
T Consensus 115 ~P~y~~~---s~~~l~~~f~~va 134 (306)
T 1o5k_A 115 TPYYNKP---TQEGLYQHYKYIS 134 (306)
T ss_dssp CCCSSCC---CHHHHHHHHHHHH
T ss_pred CCCCCCC---CHHHHHHHHHHHH
Confidence 9987532 4455555554443
No 231
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=95.30 E-value=0.03 Score=52.47 Aligned_cols=94 Identities=11% Similarity=0.112 Sum_probs=59.8
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCCCcCh---HHHHHHHHHHhcCCccEEEcCCCCCHHHHH----HHHHcCcCEEEEc
Q 018519 221 EDARIAVQAGAAGIIVSNHGARQLDYVPAT---IMALEEVVKATQGRIPVFLDGGVRRGTDVF----KALALGASGIFIG 293 (354)
Q Consensus 221 ~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~---~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~----kalalGAd~V~ig 293 (354)
+.+..+++.|+|+|++.|+-|-. ...+. .+.+..+++.+++++|||+--|=.+-.+++ .|-.+|||++++-
T Consensus 39 ~lv~~li~~Gv~Gl~v~GtTGE~--~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~ 116 (307)
T 3s5o_A 39 ENLHKLGTFPFRGFVVQGSNGEF--PFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVV 116 (307)
T ss_dssp HHHHHHTTSCCSEEEESSGGGTG--GGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHcCCCEEEECccccch--hhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEc
Confidence 44556778999999997664421 11222 234555566666789988765555555555 3445899999999
Q ss_pred HHHHHHHhhcCHHHHHHHHHHHHH
Q 018519 294 RPVVYSLAAEGEKGVRRVLEMLRE 317 (354)
Q Consensus 294 r~~l~~~~~~G~~gv~~~l~~l~~ 317 (354)
.|+.+.- .-.++++.++++.+.+
T Consensus 117 ~P~y~~~-~~s~~~l~~~f~~ia~ 139 (307)
T 3s5o_A 117 TPCYYRG-RMSSAALIHHYTKVAD 139 (307)
T ss_dssp CCCTTGG-GCCHHHHHHHHHHHHH
T ss_pred CCCcCCC-CCCHHHHHHHHHHHHh
Confidence 9987631 0145666666665544
No 232
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=95.25 E-value=0.04 Score=51.47 Aligned_cols=93 Identities=15% Similarity=0.238 Sum_probs=60.9
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcCh---HHHHHHHHHHhcC-CccEEEcCCCCCHHHHHH----HHHcCcCEEE
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPAT---IMALEEVVKATQG-RIPVFLDGGVRRGTDVFK----ALALGASGIF 291 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~---~~~l~~i~~~~~~-~i~vi~~GGi~~g~dv~k----alalGAd~V~ 291 (354)
.+.++.+++.|+|+|++.|+-|-. ...+. .+.+..+++.+++ ++|||+--|=.+-.++++ |-.+|||+++
T Consensus 31 ~~lv~~li~~Gv~gl~v~GttGE~--~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Gadavl 108 (301)
T 3m5v_A 31 ARLIKRQIENGIDAVVPVGTTGES--ATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGADGIL 108 (301)
T ss_dssp HHHHHHHHHTTCCEEECSSTTTTG--GGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHcCCCEEEECccccCh--hhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 345567789999999996654421 11222 2345566677777 899998666556666653 3448999999
Q ss_pred EcHHHHHHHhhcCHHHHHHHHHHHHH
Q 018519 292 IGRPVVYSLAAEGEKGVRRVLEMLRE 317 (354)
Q Consensus 292 igr~~l~~~~~~G~~gv~~~l~~l~~ 317 (354)
+-.|+++.. .++++.++++.+.+
T Consensus 109 v~~P~y~~~---s~~~l~~~f~~va~ 131 (301)
T 3m5v_A 109 SVAPYYNKP---TQQGLYEHYKAIAQ 131 (301)
T ss_dssp EECCCSSCC---CHHHHHHHHHHHHH
T ss_pred EcCCCCCCC---CHHHHHHHHHHHHH
Confidence 999987642 45666555555544
No 233
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=95.24 E-value=0.032 Score=50.22 Aligned_cols=78 Identities=19% Similarity=0.193 Sum_probs=54.5
Q ss_pred HHHHHhhhcCCcccccccCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHH
Q 018519 200 LAAYVAGQIDRSLSWKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDV 279 (354)
Q Consensus 200 ~~~~~~~~~~~~~~w~Gi~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv 279 (354)
++++.+......++-..+++.++++.+.++|+|+|+. ++ .+.+.+..+++ . .+|++. |+.|++++
T Consensus 76 I~~l~~~~~~~~iGaGTVlt~~~a~~Ai~AGA~fIvs---P~-------~~~~vi~~~~~-~--gi~~ip--Gv~TptEi 140 (232)
T 4e38_A 76 IRLLRQAQPEMLIGAGTILNGEQALAAKEAGATFVVS---PG-------FNPNTVRACQE-I--GIDIVP--GVNNPSTV 140 (232)
T ss_dssp HHHHHHHCTTCEEEEECCCSHHHHHHHHHHTCSEEEC---SS-------CCHHHHHHHHH-H--TCEEEC--EECSHHHH
T ss_pred HHHHHHhCCCCEEeECCcCCHHHHHHHHHcCCCEEEe---CC-------CCHHHHHHHHH-c--CCCEEc--CCCCHHHH
Confidence 4444444323333333578999999999999999963 21 12344444333 2 677777 69999999
Q ss_pred HHHHHcCcCEEEE
Q 018519 280 FKALALGASGIFI 292 (354)
Q Consensus 280 ~kalalGAd~V~i 292 (354)
.+|+.+|||.|.+
T Consensus 141 ~~A~~~Gad~vK~ 153 (232)
T 4e38_A 141 EAALEMGLTTLKF 153 (232)
T ss_dssp HHHHHTTCCEEEE
T ss_pred HHHHHcCCCEEEE
Confidence 9999999999987
No 234
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=95.24 E-value=0.18 Score=48.19 Aligned_cols=120 Identities=17% Similarity=0.107 Sum_probs=79.7
Q ss_pred ChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-CCcc
Q 018519 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI-DRSL 212 (354)
Q Consensus 134 d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 212 (354)
+++.+.+.++++.+.||+++.++++++.. + .+ ...+.++.+... +.++
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKik~g~~~~--~-~~----------------------------~e~v~avr~a~G~d~~l 194 (371)
T 2ovl_A 146 PVADLKTQADRFLAGGFRAIKMKVGRPDL--K-ED----------------------------VDRVSALREHLGDSFPL 194 (371)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCCSSH--H-HH----------------------------HHHHHHHHHHHCTTSCE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCH--H-HH----------------------------HHHHHHHHHHhCCCCeE
Confidence 67778888888889999999999876311 0 00 011222222221 1222
Q ss_pred ccc--ccCCHHHH----HHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcC
Q 018519 213 SWK--GVLTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG 286 (354)
Q Consensus 213 ~w~--Gi~~~~~a----~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalG 286 (354)
..+ +-.+.+++ +.+.+.|++.|- |. ..+..++.+.++++.+ ++||++++.+.+..|+.+++..|
T Consensus 195 ~vDan~~~~~~~a~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~iPI~~dE~~~~~~~~~~~i~~~ 264 (371)
T 2ovl_A 195 MVDANMKWTVDGAIRAARALAPFDLHWIE-------EP-TIPDDLVGNARIVRES--GHTIAGGENLHTLYDFHNAVRAG 264 (371)
T ss_dssp EEECTTCSCHHHHHHHHHHHGGGCCSEEE-------CC-SCTTCHHHHHHHHHHH--CSCEEECTTCCSHHHHHHHHHHT
T ss_pred EEECCCCCCHHHHHHHHHHHHhcCCCEEE-------CC-CCcccHHHHHHHHhhC--CCCEEeCCCCCCHHHHHHHHHcC
Confidence 222 22355555 455677888773 11 1234688888888887 79999999999999999999976
Q ss_pred -cCEEEEcH
Q 018519 287 -ASGIFIGR 294 (354)
Q Consensus 287 -Ad~V~igr 294 (354)
+|.|++..
T Consensus 265 ~~d~v~ik~ 273 (371)
T 2ovl_A 265 SLTLPEPDV 273 (371)
T ss_dssp CCSEECCCT
T ss_pred CCCEEeeCc
Confidence 89999964
No 235
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=95.21 E-value=0.043 Score=54.83 Aligned_cols=238 Identities=17% Similarity=0.180 Sum_probs=111.0
Q ss_pred hcccceeeccccC-CCCCCccceeEc-CeeeccceEecccccccccCChhhHHHHHHHHHcCCcEEecCCCCCCHHHHHh
Q 018519 42 AFSRILFRPRILI-DVSKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVAS 119 (354)
Q Consensus 42 ~~~~i~l~pr~l~-~~~~vd~st~l~-g~~l~~Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~s~~~~~~~eei~~ 119 (354)
.||++.|+|.... ..+++|++|.+- +.++..|++.|||...+ +..+|.+.++.|...++.. +.+.++.++
T Consensus 11 t~~d~~~~p~~~~~~~~~~~~~t~lt~~i~l~iPivsa~M~tVT------e~~lA~ala~~GGiGvI~~--~~~~e~~a~ 82 (490)
T 4avf_A 11 TFDDVLLIPGYSEVLPKDVSLKTRLTRGIELNIPLVSAAMDTVT------EARLAIAMAQEGGIGIIHK--NMGIEQQAA 82 (490)
T ss_dssp CGGGEEECCCCBCSCGGGSCCCEEEETTEEESSSEEECSCTTTC------SHHHHHHHHHHTSEEEECC--SSCHHHHHH
T ss_pred CcceEEEeCCCCcccccceeeecccccCcccCCCccccchhhhC------HHHHHHHHHHcCCCccccC--CCCHHHHHH
Confidence 6999999997552 335799999885 68899999999998765 6689999999988888863 455654332
Q ss_pred h------CCCceEEEEeecCChHHHHHHHHHHHHcCCCEEEEecCCCCCC-chhHHhhh-----------------ccCC
Q 018519 120 T------GPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLG-RREADIKN-----------------RFTL 175 (354)
Q Consensus 120 ~------~~~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g-~r~~~~r~-----------------~~~~ 175 (354)
. ......-....-.......+.++...+.++..+-+.=+.-..| -..+|++. -..+
T Consensus 83 ~v~~vk~~~~~m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd~g~lvGIVt~rDl~~~~~~~~~V~~vMtp~~~~vtv 162 (490)
T 4avf_A 83 EVRKVKKHETAIVRDPVTVTPSTKIIELLQMAREYGFSGFPVVEQGELVGIVTGRDLRVKPNAGDTVAAIMTPKDKLVTA 162 (490)
T ss_dssp HHHHHHHCCC----------------------------------------------------------------------
T ss_pred HhhhhcccccCcccCceEeCCCCcHHHHHHHHHHhCCCEEEEEECCEEEEEEEhHHhhhccccCCcHHHHhccCCCCEEE
Confidence 1 1110000111101122334445555555554432210100000 00111110 0001
Q ss_pred CCcCccccccCCccC------c-Ccc-cchhh---HHHHHhhhcCCccccc-----------cc--CCHHHHHHHHHhCC
Q 018519 176 PPFLTLKNFQGLDLG------K-MDE-ANDSG---LAAYVAGQIDRSLSWK-----------GV--LTAEDARIAVQAGA 231 (354)
Q Consensus 176 p~~~~~~~~~~~~~~------~-~~~-~~~~~---~~~~~~~~~~~~~~w~-----------Gi--~~~~~a~~~~~~G~ 231 (354)
++............. + .++ ....+ ...+.+....|....+ |. ...+.++.+.++|+
T Consensus 163 ~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~p~a~kd~~grl~v~aavG~~~~~~~~a~~l~~aG~ 242 (490)
T 4avf_A 163 REGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAKTYPLASKDEQGRLRVGAAVGTGADTGERVAALVAAGV 242 (490)
T ss_dssp --------------------------------------------CTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHTTC
T ss_pred CCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhhccCcchhhhccCcceeeeeeccccchHHHHHHHhhccc
Confidence 111000000000000 0 000 00001 1112221111111111 22 34788899999999
Q ss_pred CEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEc
Q 018519 232 AGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 293 (354)
Q Consensus 232 d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~ig 293 (354)
|.|++....|+ ....++.+.++++..+ ++||++ |.+.+.+++.++..+|||+|.+|
T Consensus 243 d~I~id~a~g~----~~~~~~~v~~i~~~~p-~~~Vi~-g~v~t~e~a~~l~~aGaD~I~vg 298 (490)
T 4avf_A 243 DVVVVDTAHGH----SKGVIERVRWVKQTFP-DVQVIG-GNIATAEAAKALAEAGADAVKVG 298 (490)
T ss_dssp SEEEEECSCCS----BHHHHHHHHHHHHHCT-TSEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred ceEEecccCCc----chhHHHHHHHHHHHCC-CceEEE-eeeCcHHHHHHHHHcCCCEEEEC
Confidence 99999543221 2344567788877663 678887 77999999999999999999985
No 236
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=95.17 E-value=0.025 Score=52.58 Aligned_cols=93 Identities=17% Similarity=0.331 Sum_probs=58.5
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcCh---HHHHHHHHHHhcCCccEEEcCCCCCHHHHHH----HHHcCcCEEEE
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPAT---IMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFI 292 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~---~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~k----alalGAd~V~i 292 (354)
.+.++.+++.|+|+|++.|+-|-. ...+. .+.+..+++.+++++|||+--|=.+-.++++ |-.+|||+|++
T Consensus 24 ~~lv~~li~~Gv~gl~~~GttGE~--~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv 101 (292)
T 2vc6_A 24 HDLVEWQIEEGSFGLVPCGTTGES--PTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLI 101 (292)
T ss_dssp HHHHHHHHHTTCSEEETTSGGGTG--GGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEECccccCh--hhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEE
Confidence 345667789999999986654321 11222 2345555666667899876555445455543 34489999999
Q ss_pred cHHHHHHHhhcCHHHHHHHHHHHHH
Q 018519 293 GRPVVYSLAAEGEKGVRRVLEMLRE 317 (354)
Q Consensus 293 gr~~l~~~~~~G~~gv~~~l~~l~~ 317 (354)
-.|+++.. .++++.++++.+.+
T Consensus 102 ~~P~y~~~---s~~~l~~~f~~ia~ 123 (292)
T 2vc6_A 102 VSPYYNKP---TQEGIYQHFKAIDA 123 (292)
T ss_dssp ECCCSSCC---CHHHHHHHHHHHHH
T ss_pred cCCCCCCC---CHHHHHHHHHHHHH
Confidence 99987532 45666555555544
No 237
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=95.17 E-value=0.17 Score=48.06 Aligned_cols=121 Identities=17% Similarity=0.182 Sum_probs=79.4
Q ss_pred CChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-CCc
Q 018519 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI-DRS 211 (354)
Q Consensus 133 ~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 211 (354)
.+++.+.+.++++.+.||+++.++++++.. +. + ...+.++.+... +.+
T Consensus 143 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~~~--~~-~----------------------------~e~v~avr~a~g~~~~ 191 (359)
T 1mdl_A 143 DGVKLATERAVTAAELGFRAVKTRIGYPAL--DQ-D----------------------------LAVVRSIRQAVGDDFG 191 (359)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEEEECCCSSH--HH-H----------------------------HHHHHHHHHHHCSSSE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCH--HH-H----------------------------HHHHHHHHHHhCCCCE
Confidence 466777778888888999999999876210 00 0 011222222221 112
Q ss_pred cccc--ccCCHHHH----HHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHc
Q 018519 212 LSWK--GVLTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL 285 (354)
Q Consensus 212 ~~w~--Gi~~~~~a----~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalal 285 (354)
+..+ +-.+.+++ +.+.+.|++.|- |. ..+..++.+.++++.+ ++||++++.+.+..|+.+++..
T Consensus 192 l~vDan~~~~~~~a~~~~~~l~~~~i~~iE-------~P-~~~~~~~~~~~l~~~~--~iPI~~de~~~~~~~~~~~i~~ 261 (359)
T 1mdl_A 192 IMVDYNQSLDVPAAIKRSQALQQEGVTWIE-------EP-TLQHDYEGHQRIQSKL--NVPVQMGENWLGPEEMFKALSI 261 (359)
T ss_dssp EEEECTTCSCHHHHHHHHHHHHHHTCSCEE-------CC-SCTTCHHHHHHHHHTC--SSCEEECTTCCSHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhCCCeEE-------CC-CChhhHHHHHHHHHhC--CCCEEeCCCCCCHHHHHHHHHc
Confidence 2222 22345544 566788999873 11 1234678888888876 7999999999999999999998
Q ss_pred C-cCEEEEcH
Q 018519 286 G-ASGIFIGR 294 (354)
Q Consensus 286 G-Ad~V~igr 294 (354)
| +|.|++-.
T Consensus 262 ~~~d~v~ik~ 271 (359)
T 1mdl_A 262 GACRLAMPDA 271 (359)
T ss_dssp TCCSEECCBT
T ss_pred CCCCEEeecc
Confidence 6 89999964
No 238
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=95.16 E-value=0.53 Score=43.97 Aligned_cols=190 Identities=19% Similarity=0.164 Sum_probs=98.9
Q ss_pred ceEecccccccccCChhhHHHHHHHHHcCCcEEecC-CC------------CCCHHHHHh-------hCC--CceEEEE-
Q 018519 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSS-WS------------TSSVEEVAS-------TGP--GIRFFQL- 129 (354)
Q Consensus 73 Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~s~-~~------------~~~~eei~~-------~~~--~~~~~QL- 129 (354)
+.++.|.++ |...|+.+.++|...++.+ .+ ..+++|+.. ..+ -|...=+
T Consensus 25 ~~i~~~~a~--------D~~sA~l~e~aGf~ai~vsG~~~a~s~~G~pD~~~vt~~em~~~~~~i~r~~~~~~PviaD~d 96 (307)
T 3lye_A 25 ELIVCPGVY--------DGLSARTAMELGFKSLYMTGAGTTASRLGQPDLAIAQLHDMRDNADMIANLDPFGPPLIADMD 96 (307)
T ss_dssp CCEEEEEEC--------SHHHHHHHHHTTCSCEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHTSSTTSCCEEEECT
T ss_pred CeEEEecCc--------CHHHHHHHHHcCCCEEEeccHHHHHHhcCCCCCCCCCHHHHHHHHHhhhccCCCCCcEEEECC
Confidence 456666655 4589999999998766532 11 135555432 222 2222211
Q ss_pred eecCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-
Q 018519 130 YVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI- 208 (354)
Q Consensus 130 y~~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 208 (354)
+.+.++....+.+++.+++|+.++-|- |. +..+| .++. + -+.+.. .......++..+....
T Consensus 97 ~Gyg~~~~v~~~v~~l~~aGaagv~iE-Dq-~~~k~-----cgh~-~----gk~l~~------~~e~~~rI~Aa~~A~~~ 158 (307)
T 3lye_A 97 TGYGGPIMVARTVEHYIRSGVAGAHLE-DQ-ILTKR-----CGHL-S----GKKVVS------RDEYLVRIRAAVATKRR 158 (307)
T ss_dssp TCSSSHHHHHHHHHHHHHTTCCEEEEC-CB-CCCC------------------CBCC------HHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCeEEEEc-CC-CCCcc-----cCCC-C----CCeecC------HHHHHHHHHHHHHHHHh
Confidence 112356677788899999999887664 21 11111 0000 0 000000 0001122333332211
Q ss_pred -CCccccc---------cc-CCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEE---cCCCC
Q 018519 209 -DRSLSWK---------GV-LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL---DGGVR 274 (354)
Q Consensus 209 -~~~~~w~---------Gi-~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~---~GGi~ 274 (354)
.+.+... |+ -..+.++...++|||.|.+ +| +.+.+.+.++.+.++ .+|+++ .+|-.
T Consensus 159 ~~~d~~I~ARTDa~~~~gldeAi~Ra~ay~eAGAD~ifi--~~-------~~~~~~~~~i~~~~~-~~Pv~~n~~~~g~~ 228 (307)
T 3lye_A 159 LRSDFVLIARTDALQSLGYEECIERLRAARDEGADVGLL--EG-------FRSKEQAAAAVAALA-PWPLLLNSVENGHS 228 (307)
T ss_dssp TTCCCEEEEEECCHHHHCHHHHHHHHHHHHHTTCSEEEE--CC-------CSCHHHHHHHHHHHT-TSCBEEEEETTSSS
T ss_pred cCCCeEEEEechhhhccCHHHHHHHHHHHHHCCCCEEEe--cC-------CCCHHHHHHHHHHcc-CCceeEEeecCCCC
Confidence 2322211 22 1345556779999999998 43 456778888888874 377754 34422
Q ss_pred CHHHHHHHHHcCcCEEEEcHHHHH
Q 018519 275 RGTDVFKALALGASGIFIGRPVVY 298 (354)
Q Consensus 275 ~g~dv~kalalGAd~V~igr~~l~ 298 (354)
....+.+.-.+|.+.|..+...+.
T Consensus 229 p~~t~~eL~~lGv~~v~~~~~~~r 252 (307)
T 3lye_A 229 PLITVEEAKAMGFRIMIFSFATLA 252 (307)
T ss_dssp CCCCHHHHHHHTCSEEEEETTTHH
T ss_pred CCCCHHHHHHcCCeEEEEChHHHH
Confidence 222333444589999988875554
No 239
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=95.14 E-value=0.022 Score=53.97 Aligned_cols=106 Identities=20% Similarity=0.221 Sum_probs=63.4
Q ss_pred HHHH--HHhCCCEEEEecCCcCC----C---CCCcChH---HHHHHHHHHhcCCccEE-EcCCCCCHHHHHHH----HHc
Q 018519 223 ARIA--VQAGAAGIIVSNHGARQ----L---DYVPATI---MALEEVVKATQGRIPVF-LDGGVRRGTDVFKA----LAL 285 (354)
Q Consensus 223 a~~~--~~~G~d~I~vs~~gg~~----~---~~~~~~~---~~l~~i~~~~~~~i~vi-~~GGi~~g~dv~ka----lal 285 (354)
++.+ .+.|+|.+.+--.|-.. + ....+.- +.+.++.++. .+|+| ++||+ +..+.++. +..
T Consensus 194 ~R~~~~~elGaDv~Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~a~--~~P~v~lsgG~-~~~~fl~~v~~A~~a 270 (332)
T 3iv3_A 194 MKVFSAERFGIDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAFREQEAST--DLPYIYLSAGV-SAELFQETLVFAHKA 270 (332)
T ss_dssp HHHHTSGGGCCSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHHTC--SSCEEEECTTC-CHHHHHHHHHHHHHH
T ss_pred HHHHhhcCcCCcEEEEecCCChhhhcccccccccccHHHHHHHHHHHHhcC--CCCEEEECCCC-CHHHHHHHHHHHHHc
Confidence 4455 57799999984222100 0 1112222 3455555554 79955 79998 56666654 458
Q ss_pred Cc--CEEEEcHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHhCCCChhhhcccc
Q 018519 286 GA--SGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDH 338 (354)
Q Consensus 286 GA--d~V~igr~~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~i~~l~~~~ 338 (354)
|| .+|.+||..-. .++..+.+.=.+..+.++.-.|..+|++|+.-.
T Consensus 271 Ga~f~Gv~~GRnvwq-------~~v~~~~~~~~~~~~~~l~~~g~~~i~~l~~v~ 318 (332)
T 3iv3_A 271 GAKFNGVLCGRATWA-------GSVQVYMEEGKEAARQWLRTSGLQNINELNKVL 318 (332)
T ss_dssp TCCCCEEEECHHHHT-------THHHHHHHHCHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred CCCcceEEeeHHHHH-------hhhhhhccccHHHHHHHHHHHhHHHHHHHHHHH
Confidence 99 99999997543 233334433344556677777777777776543
No 240
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=95.05 E-value=0.037 Score=53.84 Aligned_cols=68 Identities=26% Similarity=0.377 Sum_probs=50.7
Q ss_pred CHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEc
Q 018519 219 TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 293 (354)
Q Consensus 219 ~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~ig 293 (354)
..+.++.++++|+|.|++..+.|. .....+.+.++++.. ++||++ |++.+.+++.++..+|||+|.+|
T Consensus 145 ~~e~~~~lveaGvdvIvldta~G~----~~~~~e~I~~ik~~~--~i~Vi~-g~V~t~e~A~~a~~aGAD~I~vG 212 (400)
T 3ffs_A 145 EIERAKLLVEAGVDVIVLDSAHGH----SLNIIRTLKEIKSKM--NIDVIV-GNVVTEEATKELIENGADGIKVG 212 (400)
T ss_dssp -CHHHHHHHHHTCSEEEECCSCCS----BHHHHHHHHHHHTTC--CCEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCC----cccHHHHHHHHHhcC--CCeEEE-eecCCHHHHHHHHHcCCCEEEEe
Confidence 368899999999999998433221 111245566666544 678887 67999999999999999999996
No 241
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=95.04 E-value=0.061 Score=50.28 Aligned_cols=80 Identities=20% Similarity=0.242 Sum_probs=53.8
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHH----------HHHHHHHcCcCEE
Q 018519 221 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT----------DVFKALALGASGI 290 (354)
Q Consensus 221 ~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~----------dv~kalalGAd~V 290 (354)
+.|+.+.++|+|+++.|.+ + +..+++.++ .-.+++++||+-.. .+.+++..|||.+
T Consensus 162 ~lA~~a~~~G~dGvV~s~~------------E-~~~IR~~~~-~~fl~VTPGIr~qG~~~~DQ~Rv~t~~~a~~aGAd~i 227 (303)
T 3ru6_A 162 NFSKISYENGLDGMVCSVF------------E-SKKIKEHTS-SNFLTLTPGIRPFGETNDDQKRVANLAMARENLSDYI 227 (303)
T ss_dssp HHHHHHHHTTCSEEECCTT------------T-HHHHHHHSC-TTSEEEECCCCTTC--------CCSHHHHHHTTCSEE
T ss_pred HHHHHHHHcCCCEEEECHH------------H-HHHHHHhCC-CccEEECCCcCcccCCcccccccCCHHHHHHcCCCEE
Confidence 5677888999999876321 1 456666664 33488999998432 3567788999999
Q ss_pred EEcHHHHHHHhhcCHHHHHHHHHHHHHHHH
Q 018519 291 FIGRPVVYSLAAEGEKGVRRVLEMLREEFE 320 (354)
Q Consensus 291 ~igr~~l~~~~~~G~~gv~~~l~~l~~el~ 320 (354)
.+||++..+ +.....++.++++++
T Consensus 228 VvGr~I~~a------~dp~~a~~~i~~~i~ 251 (303)
T 3ru6_A 228 VVGRPIYKN------ENPRAVCEKILNKIH 251 (303)
T ss_dssp EECHHHHTS------SCHHHHHHHHHHHHC
T ss_pred EEChHHhCC------CCHHHHHHHHHHHHH
Confidence 999986642 223345555655554
No 242
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=95.00 E-value=0.047 Score=49.85 Aligned_cols=80 Identities=21% Similarity=0.333 Sum_probs=55.0
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCH-HH---------HHHHHHcCcCE
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG-TD---------VFKALALGASG 289 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g-~d---------v~kalalGAd~ 289 (354)
.+.|+.+.++|+|++++|. ..+..+++.++.+. ++++.||+-. .+ ..+++..|||.
T Consensus 165 ~~~A~~a~~aG~~GvV~sa-------------~e~~~iR~~~g~~f-l~VtPGIr~qg~~~~dQ~Rv~t~~~a~~aGad~ 230 (255)
T 3ldv_A 165 LRLATLTKNAGLDGVVCSA-------------QEASLLKQHLGREF-KLVTPGIRPAGSEQGDQRRIMTPAQAIASGSDY 230 (255)
T ss_dssp HHHHHHHHHTTCSEEECCH-------------HHHHHHHHHHCTTS-EEEEECCCCTTSTTSSCSSSCCHHHHHHTTCSE
T ss_pred HHHHHHHHHcCCCEEEECH-------------HHHHHHHHhcCCCc-EEEeCCcccCcCCccceeccCCHHHHHHcCCCE
Confidence 3456677899999998742 24566677665444 7788999853 23 56788899999
Q ss_pred EEEcHHHHHHHhhcCHHHHHHHHHHHHHHH
Q 018519 290 IFIGRPVVYSLAAEGEKGVRRVLEMLREEF 319 (354)
Q Consensus 290 V~igr~~l~~~~~~G~~gv~~~l~~l~~el 319 (354)
+.+|||+..+ +.....++.+++|+
T Consensus 231 iVvGr~I~~a------~dp~~a~~~i~~ei 254 (255)
T 3ldv_A 231 LVIGRPITQA------AHPEVVLEEINSSL 254 (255)
T ss_dssp EEECHHHHTC------SCHHHHHHHHHHHC
T ss_pred EEECHHHhCC------CCHHHHHHHHHHhh
Confidence 9999997642 23345566666664
No 243
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=94.99 E-value=0.021 Score=53.79 Aligned_cols=93 Identities=20% Similarity=0.220 Sum_probs=62.6
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCCCcCh---HHHHHHHHHHhcCCccEEEcCCCCCHHHHHH----HHHcCcCEEEEc
Q 018519 221 EDARIAVQAGAAGIIVSNHGARQLDYVPAT---IMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIG 293 (354)
Q Consensus 221 ~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~---~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~k----alalGAd~V~ig 293 (354)
+.+..+++.|+|+|++.|+-|-. ...+. .+.+..+++.+++++|||+--|- +-.++++ |-.+|||+|++-
T Consensus 37 ~lv~~li~~Gv~Gl~v~GtTGE~--~~Ls~eEr~~v~~~~v~~~~grvpViaGvg~-~t~~ai~la~~A~~~Gadavlv~ 113 (316)
T 3e96_A 37 ETVDRIVDNGIDVIVPCGNTSEF--YALSLEEAKEEVRRTVEYVHGRALVVAGIGY-ATSTAIELGNAAKAAGADAVMIH 113 (316)
T ss_dssp HHHHHHHTTTCCEECTTSGGGTG--GGSCHHHHHHHHHHHHHHHTTSSEEEEEECS-SHHHHHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHcCCCEEEeCccccCc--ccCCHHHHHHHHHHHHHHhCCCCcEEEEeCc-CHHHHHHHHHHHHhcCCCEEEEc
Confidence 45567788999999996654421 11222 23455566667778999987674 7777664 445899999999
Q ss_pred HHHHHHHhhcCHHHHHHHHHHHHHHH
Q 018519 294 RPVVYSLAAEGEKGVRRVLEMLREEF 319 (354)
Q Consensus 294 r~~l~~~~~~G~~gv~~~l~~l~~el 319 (354)
.|+.+. ..++++.++++.+.+..
T Consensus 114 ~P~y~~---~s~~~l~~~f~~va~a~ 136 (316)
T 3e96_A 114 MPIHPY---VTAGGVYAYFRDIIEAL 136 (316)
T ss_dssp CCCCSC---CCHHHHHHHHHHHHHHH
T ss_pred CCCCCC---CCHHHHHHHHHHHHHhC
Confidence 997642 25677777777666553
No 244
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=94.99 E-value=0.05 Score=54.53 Aligned_cols=69 Identities=16% Similarity=0.220 Sum_probs=53.0
Q ss_pred CHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEc
Q 018519 219 TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 293 (354)
Q Consensus 219 ~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~ig 293 (354)
..+.+..+.++|+|+|.++.+.|. ....++.+.++++.+ +++||++ |++.+.+++.++..+|||++.+|
T Consensus 256 ~~~~a~~~~~aG~d~v~i~~~~G~----~~~~~~~i~~i~~~~-~~~pvi~-~~v~t~~~a~~l~~aGad~I~vg 324 (514)
T 1jcn_A 256 DKYRLDLLTQAGVDVIVLDSSQGN----SVYQIAMVHYIKQKY-PHLQVIG-GNVVTAAQAKNLIDAGVDGLRVG 324 (514)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCC----SHHHHHHHHHHHHHC-TTCEEEE-EEECSHHHHHHHHHHTCSEEEEC
T ss_pred hHHHHHHHHHcCCCEEEeeccCCc----chhHHHHHHHHHHhC-CCCceEe-cccchHHHHHHHHHcCCCEEEEC
Confidence 467888999999999999432221 112457788888876 3688876 67999999999999999999773
No 245
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=94.98 E-value=0.058 Score=53.95 Aligned_cols=233 Identities=15% Similarity=0.173 Sum_probs=131.5
Q ss_pred hcccceeeccccC-CCCCCccceeEc-CeeeccceEecccccccccCChhhHHHHHHHHHcCCcEEecCCCCCCHHHHHh
Q 018519 42 AFSRILFRPRILI-DVSKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVAS 119 (354)
Q Consensus 42 ~~~~i~l~pr~l~-~~~~vd~st~l~-g~~l~~Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~s~~~~~~~eei~~ 119 (354)
.||++.|+|.... ..+++|++|.+- +..+..|++.|||...+ +..+|.+.++.|...+++. +.+.++.++
T Consensus 12 t~~d~~~~p~~~~~~~~~~~~~t~lt~~i~l~iPivsa~MdtVT------e~~ma~a~a~~GGiGvI~~--n~s~e~qa~ 83 (496)
T 4fxs_A 12 TFDDVLLVPAHSTVLPNTADLRTRLTKNIALNIPMVSASMDTVT------EARLAIALAQEGGIGFIHK--NMSIEQQAA 83 (496)
T ss_dssp CGGGEEECCCCCCCCGGGCBCCEEEETTEEESSSEEECCCTTTC------SHHHHHHHHHHTCEEEECS--SSCHHHHHH
T ss_pred CcccEEEecCccccccccccccceeccccccCCCceecCcchhh------HHHHHHHHHHcCCcceecC--CCCHHHHHH
Confidence 6999999997542 335799999884 68899999999997765 6788888899998888863 455554321
Q ss_pred ----h--CC-----CceEEEEeecCChHHHHHHHHHHHHcCCCEEEEecCCC-CCC-chhHHhhhcc-------------
Q 018519 120 ----T--GP-----GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTP-RLG-RREADIKNRF------------- 173 (354)
Q Consensus 120 ----~--~~-----~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~i~vd~p-~~g-~r~~~~r~~~------------- 173 (354)
. .. .+.++ .......+.++...+.++..+-+.=+.- ..| -..+|++...
T Consensus 84 ~V~~Vk~~~~~m~~d~v~v-----~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~~~~~~~~~v~diM~p~ 158 (496)
T 4fxs_A 84 QVHQVKIFEAGVVTHPVTV-----RPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVRFVTDLTKSVAAVMTPK 158 (496)
T ss_dssp HHHHHHHCCC--CBCCCCB-----CSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHTTCCCTTSBGGGTSEEG
T ss_pred HHHhccccccccccCceEE-----CCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHhhcccCCCcHHHHhcCC
Confidence 1 11 22222 1223345666777777887776542110 000 0123332100
Q ss_pred ----CCCCcCccccccCCccC------c-Ccc-cchh---hHHHHHhhhcCCccccc-----------c--cCCHHHHHH
Q 018519 174 ----TLPPFLTLKNFQGLDLG------K-MDE-ANDS---GLAAYVAGQIDRSLSWK-----------G--VLTAEDARI 225 (354)
Q Consensus 174 ----~~p~~~~~~~~~~~~~~------~-~~~-~~~~---~~~~~~~~~~~~~~~w~-----------G--i~~~~~a~~ 225 (354)
..++............+ + .++ .... ..+++.+....|....+ | ....+.++.
T Consensus 159 ~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl~~~~~p~a~~d~~grL~v~aavG~~~d~~~~a~~ 238 (496)
T 4fxs_A 159 ERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKAESKPNACKDEQGRLRVGAAVGAAPGNEERVKA 238 (496)
T ss_dssp GGCCEEECC----CGGGTCC---CCCEEEECTTSBCCEEECCC-----CCCTTCCBCTTSCBCCEEECCSSSCCHHHHHH
T ss_pred CCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHHHhhcccchhhhcccceeeeeeeccccchHHHHHH
Confidence 00111000000000000 0 000 0000 01111111111111000 2 246899999
Q ss_pred HHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEc
Q 018519 226 AVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 293 (354)
Q Consensus 226 ~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~ig 293 (354)
+.++|+|.|.+...-+ .....++.+.++++..+ ++||++ |.+.+.+++.++..+|||+|.+|
T Consensus 239 l~~aG~d~I~id~a~g----~~~~~~~~i~~ir~~~p-~~~Vi~-g~v~t~e~a~~l~~aGaD~I~Vg 300 (496)
T 4fxs_A 239 LVEAGVDVLLIDSSHG----HSEGVLQRIRETRAAYP-HLEIIG-GNVATAEGARALIEAGVSAVKVG 300 (496)
T ss_dssp HHHTTCSEEEEECSCT----TSHHHHHHHHHHHHHCT-TCCEEE-EEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHhccCceEEeccccc----cchHHHHHHHHHHHHCC-CceEEE-cccCcHHHHHHHHHhCCCEEEEC
Confidence 9999999999964322 12334577888887763 688888 77999999999999999999986
No 246
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=94.95 E-value=0.71 Score=41.20 Aligned_cols=65 Identities=23% Similarity=0.218 Sum_probs=45.0
Q ss_pred CHHHHHHHHHhCCCEEEEecCCcCCCCCCcChH-HHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEE
Q 018519 219 TAEDARIAVQAGAAGIIVSNHGARQLDYVPATI-MALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFI 292 (354)
Q Consensus 219 ~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~-~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~i 292 (354)
+.+++..+.++|+|.|.+...... .|..+ +.+..+.+ . .+++++ .+.+.+++.++..+|||.|.+
T Consensus 90 ~~~~i~~~~~~Gad~V~l~~~~~~----~p~~l~~~i~~~~~-~--g~~v~~--~v~t~eea~~a~~~Gad~Ig~ 155 (232)
T 3igs_A 90 FLDDVDALAQAGAAIIAVDGTARQ----RPVAVEALLARIHH-H--HLLTMA--DCSSVDDGLACQRLGADIIGT 155 (232)
T ss_dssp SHHHHHHHHHHTCSEEEEECCSSC----CSSCHHHHHHHHHH-T--TCEEEE--ECCSHHHHHHHHHTTCSEEEC
T ss_pred cHHHHHHHHHcCCCEEEECccccC----CHHHHHHHHHHHHH-C--CCEEEE--eCCCHHHHHHHHhCCCCEEEE
Confidence 567899999999999988543211 12233 33333333 2 456665 589999999999999999965
No 247
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=94.93 E-value=0.03 Score=52.72 Aligned_cols=93 Identities=18% Similarity=0.247 Sum_probs=59.9
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcCh---HHHHHHHHHHhcCCccEEEcCCCCCHHHHHH----HHHcCcCEEEE
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPAT---IMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFI 292 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~---~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~k----alalGAd~V~i 292 (354)
.+.+..+++.|+|+|++.|+-|-. ...+. .+.+..+++.+++++|||+--|= +-.++++ |-.+|||++++
T Consensus 36 ~~lv~~li~~Gv~gl~v~GtTGE~--~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~-st~~ai~la~~A~~~Gadavlv 112 (314)
T 3d0c_A 36 DDNVEFLLQNGIEVIVPNGNTGEF--YALTIEEAKQVATRVTELVNGRATVVAGIGY-SVDTAIELGKSAIDSGADCVMI 112 (314)
T ss_dssp HHHHHHHHHTTCSEECTTSGGGTG--GGSCHHHHHHHHHHHHHHHTTSSEEEEEECS-SHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEECcccCCh--hhCCHHHHHHHHHHHHHHhCCCCeEEecCCc-CHHHHHHHHHHHHHcCCCEEEE
Confidence 345667789999999986654321 11222 23455566667778998864444 5555553 33489999999
Q ss_pred cHHHHHHHhhcCHHHHHHHHHHHHHH
Q 018519 293 GRPVVYSLAAEGEKGVRRVLEMLREE 318 (354)
Q Consensus 293 gr~~l~~~~~~G~~gv~~~l~~l~~e 318 (354)
-.|+++.. .++++.++++.+.+.
T Consensus 113 ~~P~y~~~---s~~~l~~~f~~va~a 135 (314)
T 3d0c_A 113 HQPVHPYI---TDAGAVEYYRNIIEA 135 (314)
T ss_dssp CCCCCSCC---CHHHHHHHHHHHHHH
T ss_pred CCCCCCCC---CHHHHHHHHHHHHHh
Confidence 99987642 456776666666543
No 248
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=94.91 E-value=0.085 Score=48.23 Aligned_cols=80 Identities=24% Similarity=0.444 Sum_probs=54.2
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHH----------HHHHHHcCcCEE
Q 018519 221 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTD----------VFKALALGASGI 290 (354)
Q Consensus 221 ~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~d----------v~kalalGAd~V 290 (354)
+.|+.+.++|+|+++.|. ..+..+++.++ +-.++++.||+-..+ ..+++..|||.+
T Consensus 148 ~~A~~a~~~G~dGvV~s~-------------~e~~~ir~~~~-~~f~~vtPGIr~~g~~~gDQ~Rv~T~~~a~~aGad~i 213 (259)
T 3tfx_A 148 SLAKMAKHSGADGVICSP-------------LEVKKLHENIG-DDFLYVTPGIRPAGNAKDDQSRVATPKMAKEWGSSAI 213 (259)
T ss_dssp HHHHHHHHTTCCEEECCG-------------GGHHHHHHHHC-SSSEEEECCCCCC-----------CHHHHHHTTCSEE
T ss_pred HHHHHHHHhCCCEEEECH-------------HHHHHHHhhcC-CccEEEcCCcCCCCCCcCCccccCCHHHHHHcCCCEE
Confidence 457778899999998631 22455666664 334788999986432 668889999999
Q ss_pred EEcHHHHHHHhhcCHHHHHHHHHHHHHHHH
Q 018519 291 FIGRPVVYSLAAEGEKGVRRVLEMLREEFE 320 (354)
Q Consensus 291 ~igr~~l~~~~~~G~~gv~~~l~~l~~el~ 320 (354)
.+|||+..+ +.....++.++++++
T Consensus 214 VvGr~I~~a------~dp~~a~~~i~~~~~ 237 (259)
T 3tfx_A 214 VVGRPITLA------SDPKAAYEAIKKEFN 237 (259)
T ss_dssp EECHHHHTS------SSHHHHHHHHHHHHT
T ss_pred EEChHHhCC------CCHHHHHHHHHHHHH
Confidence 999986532 223345666666653
No 249
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=94.91 E-value=0.058 Score=50.65 Aligned_cols=94 Identities=14% Similarity=0.222 Sum_probs=61.2
Q ss_pred CHHHHHHHHHhCCCEEEEecCCcCCCCCCcCh---HHHHHHHHHHhcCCccEEEcCCCCCHHHHHH----HHHcCc-CEE
Q 018519 219 TAEDARIAVQAGAAGIIVSNHGARQLDYVPAT---IMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGA-SGI 290 (354)
Q Consensus 219 ~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~---~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~k----alalGA-d~V 290 (354)
..+.+..+++.|+|+|++.|+-|-. ...+. .+.+..+++.+++++|||+--|=.+-.++++ |-.+|| |++
T Consensus 30 l~~lv~~li~~Gv~Gl~v~GtTGE~--~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga~dav 107 (311)
T 3h5d_A 30 IPALIEHLLAHHTDGILLAGTTAES--PTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAG 107 (311)
T ss_dssp HHHHHHHHHHTTCCCEEESSTTTTG--GGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCCCSEE
T ss_pred HHHHHHHHHHcCCCEEEECccccCh--hhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEE
Confidence 3456677889999999997664421 11222 2345555666677899998766656666663 334797 999
Q ss_pred EEcHHHHHHHhhcCHHHHHHHHHHHHH
Q 018519 291 FIGRPVVYSLAAEGEKGVRRVLEMLRE 317 (354)
Q Consensus 291 ~igr~~l~~~~~~G~~gv~~~l~~l~~ 317 (354)
++-.|+++.. .++++.++++.+.+
T Consensus 108 lv~~P~y~~~---s~~~l~~~f~~va~ 131 (311)
T 3h5d_A 108 LAIVPYYNKP---SQEGMYQHFKAIAD 131 (311)
T ss_dssp EEECCCSSCC---CHHHHHHHHHHHHH
T ss_pred EEcCCCCCCC---CHHHHHHHHHHHHH
Confidence 9999987642 34565555554443
No 250
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=94.89 E-value=0.074 Score=49.92 Aligned_cols=93 Identities=12% Similarity=0.149 Sum_probs=61.4
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcCh---HHHHHHHHHHhcCCccEEEcCCCCCHHHHHH----HHHcCcCEEEE
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPAT---IMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFI 292 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~---~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~k----alalGAd~V~i 292 (354)
.+.+..+++.|+|+|++.|+-|-. ...+. .+.+..+++.+ +++|||+--|=.+-.++++ |-.+|||++++
T Consensus 32 ~~lv~~li~~Gv~Gl~v~GtTGE~--~~Lt~~Er~~v~~~~v~~~-grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv 108 (313)
T 3dz1_A 32 DRLTDFYAEVGCEGVTVLGILGEA--PKLDAAEAEAVATRFIKRA-KSMQVIVGVSAPGFAAMRRLARLSMDAGAAGVMI 108 (313)
T ss_dssp HHHHHHHHHTTCSEEEESTGGGTG--GGSCHHHHHHHHHHHHHHC-TTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHCCCCEEEeCccCcCh--hhCCHHHHHHHHHHHHHHc-CCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 345667789999999996654421 11222 23555666777 7999998666556666553 33489999999
Q ss_pred cHHHHHHHhhcCHHHHHHHHHHHHHHH
Q 018519 293 GRPVVYSLAAEGEKGVRRVLEMLREEF 319 (354)
Q Consensus 293 gr~~l~~~~~~G~~gv~~~l~~l~~el 319 (354)
-.|+ +. ..++++.++++.+.+..
T Consensus 109 ~~P~-~~---~s~~~l~~~f~~va~a~ 131 (313)
T 3dz1_A 109 APPP-SL---RTDEQITTYFRQATEAI 131 (313)
T ss_dssp CCCT-TC---CSHHHHHHHHHHHHHHH
T ss_pred CCCC-CC---CCHHHHHHHHHHHHHhC
Confidence 9997 42 35677777776666554
No 251
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=94.86 E-value=0.062 Score=49.48 Aligned_cols=71 Identities=21% Similarity=0.182 Sum_probs=55.4
Q ss_pred CHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHH
Q 018519 219 TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRP 295 (354)
Q Consensus 219 ~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~ 295 (354)
..+.|+...+.||++|.|-.-.+ +-....+.|.++++.+ ++||+.-+.|.+..++..|.++|||+|.++.+
T Consensus 74 p~~~A~~y~~~GA~~isvltd~~----~f~Gs~~~l~~ir~~v--~lPvl~kdfiid~~qv~~A~~~GAD~VlLi~a 144 (272)
T 3qja_A 74 PAKLAQAYQDGGARIVSVVTEQR----RFQGSLDDLDAVRASV--SIPVLRKDFVVQPYQIHEARAHGADMLLLIVA 144 (272)
T ss_dssp HHHHHHHHHHTTCSEEEEECCGG----GHHHHHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHHTTCSEEEEEGG
T ss_pred HHHHHHHHHHcCCCEEEEecChh----hcCCCHHHHHHHHHhC--CCCEEECccccCHHHHHHHHHcCCCEEEEecc
Confidence 45678888999999998832111 0012356788888877 89999999999999999999999999999754
No 252
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=94.85 E-value=0.44 Score=41.82 Aligned_cols=152 Identities=17% Similarity=0.173 Sum_probs=89.1
Q ss_pred HHHHHHHHHcCCc---EEecCCC--CCCHHHHH---hhCC-CceEEEEeecCChHHHHHHHHHHHHcCCCEEEEecCCCC
Q 018519 91 YATARAASAAGTI---MTLSSWS--TSSVEEVA---STGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPR 161 (354)
Q Consensus 91 ~~la~aa~~~G~~---~~~s~~~--~~~~eei~---~~~~-~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~ 161 (354)
..-+++|.++|+. +++-.-| ..++++.+ +..| ...-+-++.+.+.+.+ .+.+++.+.+.+.+|=+-+.
T Consensus 12 ~eda~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~~~~~~~VgVfvn~~~~~i---~~~~~~~~ld~vQLHG~e~~ 88 (205)
T 1nsj_A 12 LEDALFSVESGADAVGFVFYPKSKRYISPEDARRISVELPPFVFRVGVFVNEEPEKI---LDVASYVQLNAVQLHGEEPI 88 (205)
T ss_dssp HHHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHSCSSSEEEEEESSCCHHHH---HHHHHHHTCSEEEECSCCCH
T ss_pred HHHHHHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHHhCCCCCCEEEEEeCCCHHHH---HHHHHhhCCCEEEECCCCCH
Confidence 4667777888853 3332222 23555443 3333 4555666766665554 45567779999999833210
Q ss_pred CCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCccccc--ccCCHHHHHHHHHhCCCEEEEecC
Q 018519 162 LGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWK--GVLTAEDARIAVQAGAAGIIVSNH 239 (354)
Q Consensus 162 ~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~--Gi~~~~~a~~~~~~G~d~I~vs~~ 239 (354)
..+..+.. ..-.|+ .+.+.++...+.+..+|++.++..
T Consensus 89 ------------------------------------~~~~~l~~----~~~vika~~v~~~~~l~~~~~~~~d~~LlD~~ 128 (205)
T 1nsj_A 89 ------------------------------------ELCRKIAE----RILVIKAVGVSNERDMERALNYREFPILLDTK 128 (205)
T ss_dssp ------------------------------------HHHHHHHT----TSEEEEEEEESSHHHHHHHGGGTTSCEEEEES
T ss_pred ------------------------------------HHHHHHhc----CCCEEEEEEcCCHHHHHHHHHcCCCEEEECCC
Confidence 00111110 112344 344555655555556999999864
Q ss_pred ----CcC--CCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHH-cCcCEEEEcH
Q 018519 240 ----GAR--QLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA-LGASGIFIGR 294 (354)
Q Consensus 240 ----gg~--~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kala-lGAd~V~igr 294 (354)
||+ .+|| +.+.++. ..+.|++..||+ +++.+.+|+. +++.+|=+.+
T Consensus 129 ~~~~GGtG~~fdw-----~~l~~~~---~~~~p~~LAGGL-~peNV~~ai~~~~p~gVDvsS 181 (205)
T 1nsj_A 129 TPEYGGSGKTFDW-----SLILPYR---DRFRYLVLSGGL-NPENVRSAIDVVRPFAVDVSS 181 (205)
T ss_dssp CSSSSSCCSCCCG-----GGTGGGG---GGSSCEEEESSC-CTTTHHHHHHHHCCSEEEESG
T ss_pred CCCCCCCCCccCH-----HHHHhhh---cCCCcEEEECCC-CHHHHHHHHHhcCCCEEEECC
Confidence 443 3444 3333321 126799999999 7889999987 7999999987
No 253
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=94.81 E-value=0.88 Score=40.54 Aligned_cols=65 Identities=17% Similarity=0.057 Sum_probs=45.1
Q ss_pred CHHHHHHHHHhCCCEEEEecCCcCCCCCCcChH-HHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEE
Q 018519 219 TAEDARIAVQAGAAGIIVSNHGARQLDYVPATI-MALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFI 292 (354)
Q Consensus 219 ~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~-~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~i 292 (354)
+.+++..+.++|+|.|.+....+. .|..+ +.+..+.+ . .+++++ ++.+.+++.++..+|||.|.+
T Consensus 90 ~~~~i~~~~~aGad~I~l~~~~~~----~p~~l~~~i~~~~~-~--g~~v~~--~v~t~eea~~a~~~Gad~Ig~ 155 (229)
T 3q58_A 90 YLQDVDALAQAGADIIAFDASFRS----RPVDIDSLLTRIRL-H--GLLAMA--DCSTVNEGISCHQKGIEFIGT 155 (229)
T ss_dssp SHHHHHHHHHHTCSEEEEECCSSC----CSSCHHHHHHHHHH-T--TCEEEE--ECSSHHHHHHHHHTTCSEEEC
T ss_pred cHHHHHHHHHcCCCEEEECccccC----ChHHHHHHHHHHHH-C--CCEEEE--ecCCHHHHHHHHhCCCCEEEe
Confidence 567899999999999988543211 12222 33444433 2 466665 589999999999999999965
No 254
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=94.75 E-value=0.047 Score=52.06 Aligned_cols=90 Identities=12% Similarity=0.135 Sum_probs=56.3
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCCCcChHH--HHHHHHHHhcCCccEEEcCCCCCHHHHHH----HHHcCcCEEEEcH
Q 018519 221 EDARIAVQAGAAGIIVSNHGARQLDYVPATIM--ALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGR 294 (354)
Q Consensus 221 ~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~--~l~~i~~~~~~~i~vi~~GGi~~g~dv~k----alalGAd~V~igr 294 (354)
+.+..+++.|+|+|++.|+-|-. ...+.-+ .+.++ .+++++|||+--|=.+-.++++ |-.+|||+|++-.
T Consensus 51 ~lv~~li~~Gv~Gl~v~GtTGE~--~~Ls~eEr~~vi~~--~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~ 126 (344)
T 2hmc_A 51 RKGKELIADGMSAVVYCGSMGDW--PLLTDEQRMEGVER--LVKAGIPVIVGTGAVNTASAVAHAVHAQKVGAKGLMVIP 126 (344)
T ss_dssp HHHHHHHHTTCCCEEESSGGGTG--GGSCHHHHHHHHHH--HHHTTCCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccCcCh--hhCCHHHHHHHHHH--HhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 45566789999999996654421 1122222 23333 4456899987666555555543 3448999999999
Q ss_pred HHHHH-HhhcCHHHHHHHHHHHHH
Q 018519 295 PVVYS-LAAEGEKGVRRVLEMLRE 317 (354)
Q Consensus 295 ~~l~~-~~~~G~~gv~~~l~~l~~ 317 (354)
|+++. . .++++.++++.+.+
T Consensus 127 P~y~~~~---s~~~l~~~f~~IA~ 147 (344)
T 2hmc_A 127 RVLSRGS---VIAAQKAHFKAILS 147 (344)
T ss_dssp CCSSSTT---CHHHHHHHHHHHHH
T ss_pred CccCCCC---CHHHHHHHHHHHHh
Confidence 98763 2 35666666655544
No 255
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=94.71 E-value=0.086 Score=47.64 Aligned_cols=78 Identities=24% Similarity=0.287 Sum_probs=51.1
Q ss_pred HHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCH-HH---------HHHHHHcCcCEEEE
Q 018519 223 ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG-TD---------VFKALALGASGIFI 292 (354)
Q Consensus 223 a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g-~d---------v~kalalGAd~V~i 292 (354)
+..+.+.|.++++.+ ..+ +.++++.++ ..+++++|||+-. .+ +.+++..|||.+.+
T Consensus 149 a~~~~~~G~~g~V~~------------~~e-i~~lr~~~~-~~~i~V~gGI~~~g~~~~dq~rv~t~~~a~~aGad~iVv 214 (246)
T 2yyu_A 149 AALAKESGLDGVVCS------------ANE-AAFIKERCG-ASFLAVTPGIRFADDAAHDQVRVVTPRKARALGSDYIVI 214 (246)
T ss_dssp HHHHHHHTCCEEECC------------HHH-HHHHHHHHC-TTSEEEECCCCCCC-------CCCCHHHHHHHTCSEEEE
T ss_pred HHHHHHhCCCEEEeC------------HHH-HHHHHHhcC-CCCEEEeCCcCCCCCCcccccccCCHHHHHHcCCCEEEE
Confidence 333567888887541 234 667777664 3459999999853 22 66778899999999
Q ss_pred cHHHHHHHhhcCHHHHHHHHHHHHHHHH
Q 018519 293 GRPVVYSLAAEGEKGVRRVLEMLREEFE 320 (354)
Q Consensus 293 gr~~l~~~~~~G~~gv~~~l~~l~~el~ 320 (354)
||+++.+ +...+.++.++++++
T Consensus 215 Gr~I~~a------~dp~~a~~~l~~~i~ 236 (246)
T 2yyu_A 215 GRSLTRA------ADPLRTYARLQHEWN 236 (246)
T ss_dssp CHHHHTS------SSHHHHHHHHHHHCC
T ss_pred CHhhcCC------CCHHHHHHHHHHHHH
Confidence 9997642 223445566655543
No 256
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=94.65 E-value=0.9 Score=42.22 Aligned_cols=189 Identities=16% Similarity=0.078 Sum_probs=102.0
Q ss_pred eEecccccccccCChhhHHHHHHHHHcCCcEEecCC---C----------CCCHHHHHh-------hCCCceEEEE-eec
Q 018519 74 IMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSW---S----------TSSVEEVAS-------TGPGIRFFQL-YVY 132 (354)
Q Consensus 74 i~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~s~~---~----------~~~~eei~~-------~~~~~~~~QL-y~~ 132 (354)
.++.|.++ |...|+.+.++|...++.+. + ..+++|+.. ....|...=+ +..
T Consensus 23 ~i~~~~a~--------D~~sA~l~e~aGf~ai~vs~~s~a~~~~G~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~Gy 94 (298)
T 3eoo_A 23 PLQVVGAI--------TAYAAKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNATNLPLLVDIDTGW 94 (298)
T ss_dssp SEEEEECS--------SHHHHHHHHHHTCSCEEECHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHHCCSCEEEECTTCS
T ss_pred cEEEecCC--------CHHHHHHHHHcCCCEEEECcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhhcCCeEEEECCCCC
Confidence 45556554 45788999998876554221 1 135555432 2222222211 112
Q ss_pred CChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCcc
Q 018519 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (354)
Q Consensus 133 ~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (354)
.++....+.+++.+++|+.++-|. |.-. |+..+-...+.+ . +.......++..+.....+.+
T Consensus 95 g~~~~v~~~v~~l~~aGaagv~iE-Dq~~--------------~k~cGh~~gk~l--~-~~~e~~~ri~Aa~~A~~~~~~ 156 (298)
T 3eoo_A 95 GGAFNIARTIRSFIKAGVGAVHLE-DQVG--------------QKRCGHRPGKEC--V-PAGEMVDRIKAAVDARTDETF 156 (298)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEE-CBCC--------------CCCTTCCCCCCB--C-CHHHHHHHHHHHHHHCSSTTS
T ss_pred CCHHHHHHHHHHHHHhCCeEEEEC-CCCC--------------CcccCCCCCCee--c-CHHHHHHHHHHHHHhccCCCe
Confidence 467777788899999999988764 2110 111000000000 0 000112223333333223333
Q ss_pred ccc---------cc-CCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEc---CCCCCHHHH
Q 018519 213 SWK---------GV-LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD---GGVRRGTDV 279 (354)
Q Consensus 213 ~w~---------Gi-~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~---GGi~~g~dv 279 (354)
... |+ -..+.++...++|||.|.+ +| +.+.+.+.++.+.+ ++||+++ +|-.-.-.+
T Consensus 157 ~I~ARTDa~~~~gldeai~Ra~ay~~AGAD~if~--~~-------~~~~ee~~~~~~~~--~~Pl~~n~~~~g~tp~~~~ 225 (298)
T 3eoo_A 157 VIMARTDAAAAEGIDAAIERAIAYVEAGADMIFP--EA-------MKTLDDYRRFKEAV--KVPILANLTEFGSTPLFTL 225 (298)
T ss_dssp EEEEEECTHHHHHHHHHHHHHHHHHHTTCSEEEE--CC-------CCSHHHHHHHHHHH--CSCBEEECCTTSSSCCCCH
T ss_pred EEEEeehhhhhcCHHHHHHHHHhhHhcCCCEEEe--CC-------CCCHHHHHHHHHHc--CCCeEEEeccCCCCCCCCH
Confidence 221 22 1445667789999999999 43 45678888898888 5887664 442212234
Q ss_pred HHHHHcCcCEEEEcHHHHHH
Q 018519 280 FKALALGASGIFIGRPVVYS 299 (354)
Q Consensus 280 ~kalalGAd~V~igr~~l~~ 299 (354)
.+.-++|.+.|..|...+.+
T Consensus 226 ~eL~~lGv~~v~~~~~~~ra 245 (298)
T 3eoo_A 226 DELKGANVDIALYCCGAYRA 245 (298)
T ss_dssp HHHHHTTCCEEEECSHHHHH
T ss_pred HHHHHcCCeEEEEchHHHHH
Confidence 44456999999999876654
No 257
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=94.53 E-value=0.11 Score=47.99 Aligned_cols=73 Identities=27% Similarity=0.322 Sum_probs=54.3
Q ss_pred cCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEc-----CCCCCH--------HHHHHHH
Q 018519 217 VLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD-----GGVRRG--------TDVFKAL 283 (354)
Q Consensus 217 i~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~-----GGi~~g--------~dv~kal 283 (354)
+.+.+++..|++.|||-|-+... ....+--|+...+..+++.+ ++||.+- |++... .|+..+.
T Consensus 46 ~~s~~~a~~A~~gGAdRIELc~~--l~~GGlTPS~g~i~~a~~~~--~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~ 121 (287)
T 3iwp_A 46 VDSVESAVNAERGGADRIELCSG--LSEGGTTPSMGVLQVVKQSV--QIPVFVMIRPRGGDFLYSDREIEVMKADIRLAK 121 (287)
T ss_dssp ESSHHHHHHHHHHTCSEEEECBC--GGGTCBCCCHHHHHHHHTTC--CSCEEEECCSSSSCSCCCHHHHHHHHHHHHHHH
T ss_pred eCCHHHHHHHHHhCCCEEEECCC--CCCCCCCCCHHHHHHHHHhc--CCCeEEEEecCCCCcccCHHHHHHHHHHHHHHH
Confidence 46999999999999999998532 11112245567777777765 6888774 444444 7999999
Q ss_pred HcCcCEEEEc
Q 018519 284 ALGASGIFIG 293 (354)
Q Consensus 284 alGAd~V~ig 293 (354)
++|||+|.+|
T Consensus 122 ~~GAdGvVfG 131 (287)
T 3iwp_A 122 LYGADGLVFG 131 (287)
T ss_dssp HTTCSEEEEC
T ss_pred HcCCCEEEEe
Confidence 9999999999
No 258
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=94.50 E-value=1 Score=43.41 Aligned_cols=126 Identities=17% Similarity=0.105 Sum_probs=80.9
Q ss_pred cCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-CC
Q 018519 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI-DR 210 (354)
Q Consensus 132 ~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 210 (354)
..+.+.+.+.++++.+.||+++.++. +|+.+. ++ + .....+.++.+... +.
T Consensus 143 ~~~~~~~~~~a~~~~~~Gf~~iKik~-spvG~~-----------~~----~------------~~~e~v~avr~a~G~d~ 194 (401)
T 2hzg_A 143 GDTPQETLERARAARRDGFAAVKFGW-GPIGRG-----------TV----A------------ADADQIMAAREGLGPDG 194 (401)
T ss_dssp CSSHHHHHHHHHHHHHTTCSEEEEES-TTTTSS-----------CH----H------------HHHHHHHHHHHHHCSSS
T ss_pred CCCHHHHHHHHHHHHHhCCCeEEEcC-CCCCCC-----------HH----H------------HHHHHHHHHHHHhCCCC
Confidence 35788888888888899999999985 443110 00 0 00111233333221 12
Q ss_pred ccccc--ccC--CHHHH----HHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHH-HhcCCccEEEcCCCCCHHHHHH
Q 018519 211 SLSWK--GVL--TAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVK-ATQGRIPVFLDGGVRRGTDVFK 281 (354)
Q Consensus 211 ~~~w~--Gi~--~~~~a----~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~-~~~~~i~vi~~GGi~~g~dv~k 281 (354)
++..| +-. +.+++ +.+.+.|++.|- |. ..+..++.+.++++ .+ ++||++++.+.+..|+.+
T Consensus 195 ~l~vDan~~~~~~~~~a~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~~--~iPI~~dE~~~~~~~~~~ 264 (401)
T 2hzg_A 195 DLMVDVGQIFGEDVEAAAARLPTLDAAGVLWLE-------EP-FDAGALAAHAALAGRGA--RVRIAGGEAAHNFHMAQH 264 (401)
T ss_dssp EEEEECTTTTTTCHHHHHTTHHHHHHTTCSEEE-------CC-SCTTCHHHHHHHHTTCC--SSEEEECTTCSSHHHHHH
T ss_pred eEEEECCCCCCCCHHHHHHHHHHHHhcCCCEEE-------CC-CCccCHHHHHHHHhhCC--CCCEEecCCcCCHHHHHH
Confidence 22222 224 55554 466788998874 11 12346788888877 55 799999999999999999
Q ss_pred HHHcC-cCEEEEcHH
Q 018519 282 ALALG-ASGIFIGRP 295 (354)
Q Consensus 282 alalG-Ad~V~igr~ 295 (354)
++..| +|.|++-..
T Consensus 265 ~i~~~~~d~v~ik~~ 279 (401)
T 2hzg_A 265 LMDYGRIGFIQIDCG 279 (401)
T ss_dssp HHHHSCCSEEEECHH
T ss_pred HHHCCCCCEEEeCcc
Confidence 99976 899999653
No 259
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=94.50 E-value=0.044 Score=52.56 Aligned_cols=92 Identities=20% Similarity=0.268 Sum_probs=58.5
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCCCcCh---HHHHHHHHHHhcCCccEEEcCCCCCHHHHHH----HHHcCcCEEEEc
Q 018519 221 EDARIAVQAGAAGIIVSNHGARQLDYVPAT---IMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIG 293 (354)
Q Consensus 221 ~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~---~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~k----alalGAd~V~ig 293 (354)
+.+..+++.|+|+|++.|+-|-. ...+. .+.+..+++.+++++|||+--|=.+-.++++ |-.+|||++++-
T Consensus 84 ~lv~~li~~Gv~Gl~v~GTTGE~--~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlvv 161 (360)
T 4dpp_A 84 DLVNIQIQNGAEGVIVGGTTGEG--QLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHI 161 (360)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTG--GGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHcCCCEEEecccccCh--hhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHHcCCCEEEEc
Confidence 44556789999999996654421 11222 2345556666777899998555445555553 334899999999
Q ss_pred HHHHHHHhhcCHHHHHHHHHHHHH
Q 018519 294 RPVVYSLAAEGEKGVRRVLEMLRE 317 (354)
Q Consensus 294 r~~l~~~~~~G~~gv~~~l~~l~~ 317 (354)
.|+.+. -.++++.++++.+.+
T Consensus 162 ~PyY~k---~sq~gl~~hf~~IA~ 182 (360)
T 4dpp_A 162 NPYYGK---TSIEGLIAHFQSVLH 182 (360)
T ss_dssp CCCSSC---CCHHHHHHHHHTTGG
T ss_pred CCCCCC---CCHHHHHHHHHHHHH
Confidence 997653 245666555555443
No 260
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=94.44 E-value=0.032 Score=51.82 Aligned_cols=77 Identities=18% Similarity=0.263 Sum_probs=51.5
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCCCcCh---HHHHHHHHHHhcCCccEEEcCCCCCHHHHHH----HHHcCcCEEEEc
Q 018519 221 EDARIAVQAGAAGIIVSNHGARQLDYVPAT---IMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIG 293 (354)
Q Consensus 221 ~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~---~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~k----alalGAd~V~ig 293 (354)
+.++.+++.|+|+|++.|+-|-. ...+. .+.+..+++.+++++|||+--|=.+-.++++ |-.+|||++++-
T Consensus 26 ~lv~~li~~Gv~gl~~~GttGE~--~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~Gadavlv~ 103 (291)
T 3a5f_A 26 ELIEWHIKSKTDAIIVCGTTGEA--TTMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVI 103 (291)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTG--GGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHcCCCEEEECccccCh--hhCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHhcCCCEEEEc
Confidence 45566788999999997664421 11222 2345556666677899987666556566553 334899999999
Q ss_pred HHHHHH
Q 018519 294 RPVVYS 299 (354)
Q Consensus 294 r~~l~~ 299 (354)
.|+++.
T Consensus 104 ~P~y~~ 109 (291)
T 3a5f_A 104 TPYYNK 109 (291)
T ss_dssp CCCSSC
T ss_pred CCCCCC
Confidence 998753
No 261
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=94.40 E-value=0.64 Score=44.41 Aligned_cols=129 Identities=15% Similarity=0.073 Sum_probs=82.5
Q ss_pred CChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-CCc
Q 018519 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI-DRS 211 (354)
Q Consensus 133 ~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 211 (354)
.+++.+.+.++++.+.||+++-++++++..+ + . +... .....+.++.+... +.+
T Consensus 148 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~---------~--~-----~~~~---------~~~e~v~avr~a~g~d~~ 202 (382)
T 1rvk_A 148 ATPEDYGRFAETLVKRGYKGIKLHTWMPPVS---------W--A-----PDVK---------MDLKACAAVREAVGPDIR 202 (382)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEECCCTTST---------T--C-----CCHH---------HHHHHHHHHHHHHCTTSE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCcCccc---------c--c-----cchH---------HHHHHHHHHHHHhCCCCe
Confidence 4677788888888889999999998764211 0 0 0000 01112333333221 222
Q ss_pred cccc--ccCCHHHH----HHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCC-HHHHHHHHH
Q 018519 212 LSWK--GVLTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR-GTDVFKALA 284 (354)
Q Consensus 212 ~~w~--Gi~~~~~a----~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~-g~dv~kala 284 (354)
+..+ +-.+.+++ +.+.+.|++.|- |. ..+..++.+.++++.+ ++||++++.+.+ ..|+.+++.
T Consensus 203 l~vDan~~~~~~~a~~~~~~l~~~~i~~iE-------~P-~~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~~i~ 272 (382)
T 1rvk_A 203 LMIDAFHWYSRTDALALGRGLEKLGFDWIE-------EP-MDEQSLSSYKWLSDNL--DIPVVGPESAAGKHWHRAEWIK 272 (382)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHTTTCSEEE-------CC-SCTTCHHHHHHHHHHC--SSCEEECSSCSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHhcCCCEEe-------CC-CChhhHHHHHHHHhhC--CCCEEEeCCccCcHHHHHHHHH
Confidence 3223 22455555 455677888774 11 1234678888888877 799999999999 999999999
Q ss_pred cC-cCEEEEcHHH
Q 018519 285 LG-ASGIFIGRPV 296 (354)
Q Consensus 285 lG-Ad~V~igr~~ 296 (354)
.| +|.|++--..
T Consensus 273 ~~~~d~v~ik~~~ 285 (382)
T 1rvk_A 273 AGACDILRTGVND 285 (382)
T ss_dssp TTCCSEEEECHHH
T ss_pred cCCCCEEeeCchh
Confidence 87 8999996543
No 262
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=94.39 E-value=0.093 Score=52.22 Aligned_cols=68 Identities=22% Similarity=0.297 Sum_probs=53.7
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEc
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 293 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~ig 293 (354)
.+.+..+.++|+|.|.++...|. ....++.+.++++.++ ++||++ |++.+.+++.++..+|||++.++
T Consensus 239 ~~~a~~l~~aGvd~v~i~~~~G~----~~~~~e~i~~i~~~~p-~~pvi~-g~~~t~e~a~~l~~~G~d~I~v~ 306 (494)
T 1vrd_A 239 MERVEKLVKAGVDVIVIDTAHGH----SRRVIETLEMIKADYP-DLPVVA-GNVATPEGTEALIKAGADAVKVG 306 (494)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCS----SHHHHHHHHHHHHHCT-TSCEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHhCCCEEEEEecCCc----hHHHHHHHHHHHHHCC-CceEEe-CCcCCHHHHHHHHHcCCCEEEEc
Confidence 67888999999999999543221 1235678888888774 588887 78899999999889999999984
No 263
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=94.32 E-value=0.1 Score=47.03 Aligned_cols=81 Identities=25% Similarity=0.388 Sum_probs=51.3
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHH----------HHHHHHcCcCE
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTD----------VFKALALGASG 289 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~d----------v~kalalGAd~ 289 (354)
.+.|+.+.++|+|+++.|.+ -...+++.++.+. ++++.||+-..+ ..+++..|||.
T Consensus 147 ~~~A~~a~~~g~~GvV~s~~-------------e~~~ir~~~~~~f-l~vtPGIr~~g~~~~dQ~rv~t~~~~~~aGad~ 212 (239)
T 3tr2_A 147 CRMATLAKSAGLDGVVCSAQ-------------EAALLRKQFDRNF-LLVTPGIRLETDEKGDQKRVMTPRAAIQAGSDY 212 (239)
T ss_dssp HHHHHHHHHHTCCEEECCHH-------------HHHHHHTTCCTTS-EEEECCBC----------CCBCHHHHHHHTCSE
T ss_pred HHHHHHHHHcCCCEEEECch-------------hHHHHHHhcCCCc-EEECCCcCCCCCCcCcccccCCHHHHHHcCCCE
Confidence 34667778899999986421 1234555554333 788999985432 55788899999
Q ss_pred EEEcHHHHHHHhhcCHHHHHHHHHHHHHHHH
Q 018519 290 IFIGRPVVYSLAAEGEKGVRRVLEMLREEFE 320 (354)
Q Consensus 290 V~igr~~l~~~~~~G~~gv~~~l~~l~~el~ 320 (354)
+.+|||+..+ +.....++.+++|+.
T Consensus 213 lVvGr~I~~a------~dp~~a~~~i~~~i~ 237 (239)
T 3tr2_A 213 LVIGRPITQS------TDPLKALEAIDKDIK 237 (239)
T ss_dssp EEECHHHHTS------SSHHHHHHHHHHHC-
T ss_pred EEEChHHhCC------CCHHHHHHHHHHHHh
Confidence 9999986642 223345666666653
No 264
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=94.13 E-value=0.046 Score=51.04 Aligned_cols=93 Identities=18% Similarity=0.215 Sum_probs=59.3
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcCh---HHHHHHHHHHhcCCccEEEcCCCCCHHHHHH----HHHcCcCEEEE
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPAT---IMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFI 292 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~---~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~k----alalGAd~V~i 292 (354)
...+..+++.|+|+|++.|+-|-. ...+. .+.+..+++.+++++|||+--|=.+-.++++ |-.+|||++++
T Consensus 28 ~~lv~~li~~Gv~gl~v~GttGE~--~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv 105 (300)
T 3eb2_A 28 GRLCDDLIQAGVHGLTPLGSTGEF--AYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKLGADGILA 105 (300)
T ss_dssp HHHHHHHHHTTCSCBBTTSGGGTG--GGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEECccccCc--cccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 345667789999999986654321 11222 2345556666777899887555445555553 34489999999
Q ss_pred cHHHHHHHhhcCHHHHHHHHHHHHH
Q 018519 293 GRPVVYSLAAEGEKGVRRVLEMLRE 317 (354)
Q Consensus 293 gr~~l~~~~~~G~~gv~~~l~~l~~ 317 (354)
-.|+++.. .++++.++++.+.+
T Consensus 106 ~~P~y~~~---~~~~l~~~f~~va~ 127 (300)
T 3eb2_A 106 ILEAYFPL---KDAQIESYFRAIAD 127 (300)
T ss_dssp EECCSSCC---CHHHHHHHHHHHHH
T ss_pred cCCCCCCC---CHHHHHHHHHHHHH
Confidence 99987642 45666555555544
No 265
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=94.07 E-value=0.3 Score=46.95 Aligned_cols=121 Identities=15% Similarity=0.042 Sum_probs=78.8
Q ss_pred CChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-CCc
Q 018519 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI-DRS 211 (354)
Q Consensus 133 ~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 211 (354)
.+++.+.+.++++.+.||+++.++++++-.. . ...+.++.+... +.+
T Consensus 163 ~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~-------------------------------~-~e~v~avr~a~g~d~~ 210 (388)
T 2nql_A 163 RTLKARGELAKYWQDRGFNAFKFATPVADDG-------------------------------P-AAEIANLRQVLGPQAK 210 (388)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEEGGGCTTC-------------------------------H-HHHHHHHHHHHCTTSE
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEeCCCCChH-------------------------------H-HHHHHHHHHHhCCCCE
Confidence 4777788888888899999999998642110 0 011222222221 112
Q ss_pred cccc--ccCCHHHH----HHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHc
Q 018519 212 LSWK--GVLTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL 285 (354)
Q Consensus 212 ~~w~--Gi~~~~~a----~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalal 285 (354)
+..+ +-.+.+++ +.+.+.|++.|- |. ..+..++.+.++++.+ ++||++++.+.+..|+.+++..
T Consensus 211 l~vDan~~~~~~~a~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~iPI~~dE~~~~~~~~~~~i~~ 280 (388)
T 2nql_A 211 IAADMHWNQTPERALELIAEMQPFDPWFAE-------AP-VWTEDIAGLEKVSKNT--DVPIAVGEEWRTHWDMRARIER 280 (388)
T ss_dssp EEEECCSCSCHHHHHHHHHHHGGGCCSCEE-------CC-SCTTCHHHHHHHHTSC--CSCEEECTTCCSHHHHHHHHTT
T ss_pred EEEECCCCCCHHHHHHHHHHHhhcCCCEEE-------CC-CChhhHHHHHHHHhhC--CCCEEEeCCcCCHHHHHHHHHc
Confidence 2222 22355554 455677888773 11 1234678888888766 7999999999999999999998
Q ss_pred C-cCEEEEcHH
Q 018519 286 G-ASGIFIGRP 295 (354)
Q Consensus 286 G-Ad~V~igr~ 295 (354)
| +|.|++-..
T Consensus 281 ~~~d~v~ik~~ 291 (388)
T 2nql_A 281 CRIAIVQPEMG 291 (388)
T ss_dssp SCCSEECCCHH
T ss_pred CCCCEEEecCC
Confidence 7 899999543
No 266
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=93.99 E-value=0.34 Score=45.04 Aligned_cols=73 Identities=21% Similarity=0.155 Sum_probs=51.5
Q ss_pred CHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHHH
Q 018519 219 TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 298 (354)
Q Consensus 219 ~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l~ 298 (354)
..++|+...++|||.|++ ++ +.++.+.+.++.+.+..++|++++-+-....++.+.-.+|...|..+...+.
T Consensus 172 ai~Ra~ay~eAGAd~i~~--e~------~~~~~~~~~~i~~~~~~~~P~i~~~~~~~~~~~~eL~~lGv~~v~~~~~~~r 243 (295)
T 1s2w_A 172 ALKRAEAYRNAGADAILM--HS------KKADPSDIEAFMKAWNNQGPVVIVPTKYYKTPTDHFRDMGVSMVIWANHNLR 243 (295)
T ss_dssp HHHHHHHHHHTTCSEEEE--CC------CSSSSHHHHHHHHHHTTCSCEEECCSTTTTSCHHHHHHHTCCEEEECSHHHH
T ss_pred HHHHHHHHHHcCCCEEEE--cC------CCCCHHHHHHHHHHcCCCCCEEEeCCCCCCCCHHHHHHcCCcEEEEChHHHH
Confidence 456778889999999999 32 2455677888888885569999873311112344445599999999987665
Q ss_pred H
Q 018519 299 S 299 (354)
Q Consensus 299 ~ 299 (354)
+
T Consensus 244 a 244 (295)
T 1s2w_A 244 A 244 (295)
T ss_dssp H
T ss_pred H
Confidence 4
No 267
>1l6w_A Fructose-6-phosphate aldolase 1; alpha-beta barrel, domain swapping, lyase; 1.93A {Escherichia coli} SCOP: c.1.10.1
Probab=93.96 E-value=0.31 Score=43.39 Aligned_cols=97 Identities=13% Similarity=0.101 Sum_probs=68.6
Q ss_pred ccCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHh---cCCccEEEcCCCCCHHHHHHHHHcCcCEEEE
Q 018519 216 GVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAT---QGRIPVFLDGGVRRGTDVFKALALGASGIFI 292 (354)
Q Consensus 216 Gi~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~---~~~i~vi~~GGi~~g~dv~kalalGAd~V~i 292 (354)
-|.+.+.|..+.++|++.|.. .-||-.+++.+....+.++++.. +-+..|++. ++|++.++.++..+|+|.+-+
T Consensus 110 liFS~~QA~~aa~AGa~~iSp--fvgRidd~g~~G~~~i~~~~~~y~~~~~~t~il~A-S~r~~~~v~~~~l~G~d~~Ti 186 (220)
T 1l6w_A 110 AVYGAAQGLLSALAGAEYVAP--YVNRIDAQGGSGIQTVTDLHQLLKMHAPQAKVLAA-SFKTPRQALDCLLAGCESITL 186 (220)
T ss_dssp EECSHHHHHHHHHHTCSEEEE--BHHHHHHTTSCHHHHHHHHHHHHHHHCTTCEEEEB-CCSSHHHHHHHHHTTCSEEEE
T ss_pred EeCCHHHHHHHHHCCCeEEEe--ccchhhcccccHHHHHHHHHHHHHhcCCCeEEeec-ccCCHHHHHHHHHhCCCeEEC
Confidence 467999999999999998765 44454445556667776666554 225566666 599999999999999999988
Q ss_pred cHHHHHHHhhcC--HHHHHHHHHHH
Q 018519 293 GRPVVYSLAAEG--EKGVRRVLEML 315 (354)
Q Consensus 293 gr~~l~~~~~~G--~~gv~~~l~~l 315 (354)
.-.++..+...+ ..+++.+.+.+
T Consensus 187 p~~~l~~l~~h~lt~~~v~~F~~D~ 211 (220)
T 1l6w_A 187 PLDVAQQMISYPAVDAAVAKFEQDW 211 (220)
T ss_dssp CHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHcCCChHHHHHHHHHHH
Confidence 888887765433 23444444333
No 268
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=93.90 E-value=0.26 Score=44.79 Aligned_cols=74 Identities=24% Similarity=0.262 Sum_probs=54.6
Q ss_pred cCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEE-----cCCCCCH--------HHHHHHH
Q 018519 217 VLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL-----DGGVRRG--------TDVFKAL 283 (354)
Q Consensus 217 i~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~-----~GGi~~g--------~dv~kal 283 (354)
+.+.++|..|.+.|||-|-+...- ...+--|++..+..+++.+ ++||.+ .|++... .|+..+.
T Consensus 8 ~~s~~~a~~A~~~GAdRIELc~~L--~~GGlTPS~g~i~~~~~~~--~ipv~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~ 83 (256)
T 1twd_A 8 CYSMECALTAQQNGADRVELCAAP--KEGGLTPSLGVLKSVRQRV--TIPVHPIIRPRGGDFCYSDGEFAAILEDVRTVR 83 (256)
T ss_dssp ESSHHHHHHHHHTTCSEEEECBCG--GGTCBCCCHHHHHHHHHHC--CSCEEEBCCSSSSCSCCCHHHHHHHHHHHHHHH
T ss_pred eCCHHHHHHHHHcCCCEEEEcCCc--ccCCCCCCHHHHHHHHHHc--CCceEEEECCCCCCCcCCHHHHHHHHHHHHHHH
Confidence 368999999999999999996531 1112245677787888777 788876 4555554 3777778
Q ss_pred HcCcCEEEEcH
Q 018519 284 ALGASGIFIGR 294 (354)
Q Consensus 284 alGAd~V~igr 294 (354)
.+|||+|.+|-
T Consensus 84 ~~GadGvV~G~ 94 (256)
T 1twd_A 84 ELGFPGLVTGV 94 (256)
T ss_dssp HTTCSEEEECC
T ss_pred HcCCCEEEEee
Confidence 89999999994
No 269
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=93.89 E-value=0.12 Score=50.22 Aligned_cols=68 Identities=16% Similarity=0.312 Sum_probs=51.1
Q ss_pred CHHHHHHHHHhCCCEEEEec-CCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEc
Q 018519 219 TAEDARIAVQAGAAGIIVSN-HGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 293 (354)
Q Consensus 219 ~~~~a~~~~~~G~d~I~vs~-~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~ig 293 (354)
..+.+..+.++|+|+|.+.. || + ....++.+.++++.++ ++||++ |++.+.+++.++..+|||+|.+|
T Consensus 154 ~~~~a~~~~~~G~d~i~i~~~~g----~-~~~~~e~i~~ir~~~~-~~pviv-~~v~~~~~a~~a~~~Gad~I~vg 222 (404)
T 1eep_A 154 TIERVEELVKAHVDILVIDSAHG----H-STRIIELIKKIKTKYP-NLDLIA-GNIVTKEAALDLISVGADCLKVG 222 (404)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCC----S-SHHHHHHHHHHHHHCT-TCEEEE-EEECSHHHHHHHHTTTCSEEEEC
T ss_pred HHHHHHHHHHCCCCEEEEeCCCC----C-hHHHHHHHHHHHHHCC-CCeEEE-cCCCcHHHHHHHHhcCCCEEEEC
Confidence 35777888999999999832 22 1 1224566777777663 688887 77899999999999999999993
No 270
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=93.88 E-value=0.16 Score=44.59 Aligned_cols=110 Identities=26% Similarity=0.251 Sum_probs=71.6
Q ss_pred cCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCc
Q 018519 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRS 211 (354)
Q Consensus 132 ~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (354)
..+.+...+.++.+.+.|++.+.++..+|.. + ..+.... + ....
T Consensus 21 ~~~~~~~~~~~~~l~~gGv~~iel~~k~~~~--~--------------------------------~~i~~~~-~-~~~~ 64 (207)
T 2yw3_A 21 VRGGEDLLGLARVLEEEGVGALEITLRTEKG--L--------------------------------EALKALR-K-SGLL 64 (207)
T ss_dssp CCSCCCHHHHHHHHHHTTCCEEEEECSSTHH--H--------------------------------HHHHHHT-T-SSCE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCChHH--H--------------------------------HHHHHHh-C-CCCE
Confidence 4566666788888889999999998765521 0 0011111 1 1111
Q ss_pred ccccccCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEE
Q 018519 212 LSWKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIF 291 (354)
Q Consensus 212 ~~w~Gi~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~ 291 (354)
++..-+++.+++..+.++|+|+++. ++ . +.+.+...++ . .++++. |+.|.+++.+|+.+|||.|.
T Consensus 65 ~gag~vl~~d~~~~A~~~GAd~v~~---~~--~-----d~~v~~~~~~-~--g~~~i~--G~~t~~e~~~A~~~Gad~v~ 129 (207)
T 2yw3_A 65 LGAGTVRSPKEAEAALEAGAAFLVS---PG--L-----LEEVAALAQA-R--GVPYLP--GVLTPTEVERALALGLSALK 129 (207)
T ss_dssp EEEESCCSHHHHHHHHHHTCSEEEE---SS--C-----CHHHHHHHHH-H--TCCEEE--EECSHHHHHHHHHTTCCEEE
T ss_pred EEeCeEeeHHHHHHHHHcCCCEEEc---CC--C-----CHHHHHHHHH-h--CCCEEe--cCCCHHHHHHHHHCCCCEEE
Confidence 2222356789999999999999964 11 1 2233333333 4 567665 49999999999999999999
Q ss_pred E
Q 018519 292 I 292 (354)
Q Consensus 292 i 292 (354)
+
T Consensus 130 ~ 130 (207)
T 2yw3_A 130 F 130 (207)
T ss_dssp E
T ss_pred E
Confidence 8
No 271
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=93.85 E-value=0.27 Score=45.53 Aligned_cols=61 Identities=16% Similarity=0.084 Sum_probs=41.8
Q ss_pred HHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHh----------------------cCCccEEEc-CCCCCHHHHH
Q 018519 224 RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAT----------------------QGRIPVFLD-GGVRRGTDVF 280 (354)
Q Consensus 224 ~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~----------------------~~~i~vi~~-GGi~~g~dv~ 280 (354)
+.+.++|+|+|.-|..-+ .+.++.+.+.-+++.+ ++++-|=++ ||||+.+|+.
T Consensus 173 ~ia~~AGADFVKTSTGf~----~~gAT~edV~lM~~~v~~~~~~~~~~~~~~~~~~~~~tg~~vgvKAs~GGIrt~e~A~ 248 (297)
T 4eiv_A 173 VAALEGGADFLQTSSGLG----ATHATMFTVHLISIALREYMVRENERIRVEGINREGAAVRCIGIKIEVGDVHMAETAD 248 (297)
T ss_dssp HHHHHHTCSEEECCCSSS----SCCCCHHHHHHHHHHHHHHHCC------------------CCEEEEECTTCCHHHHHH
T ss_pred HHHHHhCCCEEEcCCCCC----CCCCCHHHHHHHHHHHHHHhccccccccccccccccccCCceeEEecCCCCCCHHHHH
Confidence 567899999998764321 2334454444444433 357899999 9999999999
Q ss_pred HHHHcCcC
Q 018519 281 KALALGAS 288 (354)
Q Consensus 281 kalalGAd 288 (354)
+.+.+..+
T Consensus 249 ~~i~~~~e 256 (297)
T 4eiv_A 249 FLMQMIFE 256 (297)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99995444
No 272
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=93.75 E-value=1.2 Score=42.33 Aligned_cols=122 Identities=11% Similarity=0.012 Sum_probs=80.2
Q ss_pred CChHHHHHHHHHHHH-cCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-CC
Q 018519 133 KDRNVVAQLVRRAER-AGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI-DR 210 (354)
Q Consensus 133 ~d~~~~~~~~~~a~~-~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 210 (354)
.+++.+.+.++++.+ .||+++-++++++.. + .+ ...+..+.+... +.
T Consensus 141 ~~~e~~~~~a~~~~~~~Gf~~iKik~g~~~~--~-~~----------------------------~e~v~avr~a~g~~~ 189 (370)
T 1nu5_A 141 GDTARDIDSALEMIETRRHNRFKVKLGARTP--A-QD----------------------------LEHIRSIVKAVGDRA 189 (370)
T ss_dssp SCHHHHHHHHHHHHHTTSCSEEEEECSSSCH--H-HH----------------------------HHHHHHHHHHHGGGC
T ss_pred CCHHHHHHHHHHHHHhCCccEEEEecCCCCh--H-HH----------------------------HHHHHHHHHhcCCCC
Confidence 577778888888888 999999999875311 0 00 011222222221 11
Q ss_pred ccccc--ccCCHHHH----HHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHH
Q 018519 211 SLSWK--GVLTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA 284 (354)
Q Consensus 211 ~~~w~--Gi~~~~~a----~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kala 284 (354)
.+..+ +-.+.+++ +.+.+.|++.|- |. ..+..++.+.++++.+ ++||++++.+.+..|+.+++.
T Consensus 190 ~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE-------qP-~~~~~~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i~ 259 (370)
T 1nu5_A 190 SVRVDVNQGWDEQTASIWIPRLEEAGVELVE-------QP-VPRANFGALRRLTEQN--GVAILADESLSSLSSAFELAR 259 (370)
T ss_dssp EEEEECTTCCCHHHHHHHHHHHHHHTCCEEE-------CC-SCTTCHHHHHHHHHHC--SSEEEESTTCCSHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhcCcceEe-------CC-CCcccHHHHHHHHHhC--CCCEEeCCCCCCHHHHHHHHH
Confidence 22222 22355554 456788998874 11 1234678888888877 899999999999999999999
Q ss_pred cC-cCEEEEcHH
Q 018519 285 LG-ASGIFIGRP 295 (354)
Q Consensus 285 lG-Ad~V~igr~ 295 (354)
.| +|.|++--.
T Consensus 260 ~~~~d~v~ik~~ 271 (370)
T 1nu5_A 260 DHAVDAFSLKLC 271 (370)
T ss_dssp TTCCSEEEECHH
T ss_pred hCCCCEEEEchh
Confidence 87 899999643
No 273
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=93.75 E-value=0.16 Score=45.89 Aligned_cols=75 Identities=20% Similarity=0.285 Sum_probs=50.2
Q ss_pred HHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHH----------HHHHHHHcCcCEEEEcH
Q 018519 225 IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT----------DVFKALALGASGIFIGR 294 (354)
Q Consensus 225 ~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~----------dv~kalalGAd~V~igr 294 (354)
...+.|.++++.+ ..+ +.++++.++ +.+++++|||+-.. .+.+++..|||.+.+||
T Consensus 157 ~~~~~G~~g~V~~------------~~e-i~~lr~~~~-~~~i~v~gGI~~~g~~~~dq~rv~t~~~a~~aGad~iVvGr 222 (245)
T 1eix_A 157 LTQKCGLDGVVCS------------AQE-AVRFKQVFG-QEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAGVDYMVIGR 222 (245)
T ss_dssp HHHHTTCSEEECC------------GGG-HHHHHHHHC-SSSEEEECCBCCTTCCCTTCCSCBCHHHHHHTTCSEEEECH
T ss_pred HHHHcCCCeEEeC------------HHH-HHHHHHhcC-CCCEEEECCcCCCCCCccchhccCCHHHHHHcCCCEEEECH
Confidence 3567888887542 124 666666664 46899999998531 36677889999999999
Q ss_pred HHHHHHhhcCHHHHHHHHHHHHHHH
Q 018519 295 PVVYSLAAEGEKGVRRVLEMLREEF 319 (354)
Q Consensus 295 ~~l~~~~~~G~~gv~~~l~~l~~el 319 (354)
+++.+ +...+.++.+++++
T Consensus 223 ~I~~a------~dp~~a~~~l~~~i 241 (245)
T 1eix_A 223 PVTQS------VDPAQTLKAINASL 241 (245)
T ss_dssp HHHTS------SSHHHHHHHHHHHT
T ss_pred HHcCC------CCHHHHHHHHHHHH
Confidence 97642 12334555555543
No 274
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=93.64 E-value=0.16 Score=47.26 Aligned_cols=72 Identities=21% Similarity=0.204 Sum_probs=54.2
Q ss_pred cCCHHHHHHHHHhCCCEEEEecCCcC--CCCCC---cChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEE
Q 018519 217 VLTAEDARIAVQAGAAGIIVSNHGAR--QLDYV---PATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGI 290 (354)
Q Consensus 217 i~~~~~a~~~~~~G~d~I~vs~~gg~--~~~~~---~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V 290 (354)
+.+++.|+...++||+.|.+=-..-+ ...+| ....+.|.++++.+ .+||++-+++..-.++..+.++|||+|
T Consensus 28 ~~~~e~A~~ye~~GA~~lsvLe~~~~Di~~~~g~~R~~~~~~i~~i~~~v--~iPvl~k~~i~~ide~qil~aaGAD~I 104 (297)
T 4adt_A 28 VKNVEQAKIAEKAGAIGVMILENIPSELRNTDGVARSVDPLKIEEIRKCI--SINVLAKVRIGHFVEAQILEELKVDML 104 (297)
T ss_dssp ESSHHHHHHHHHHTCSEEEECCCCC-----CCCCCCCCCHHHHHHHHTTC--CSEEEEEEETTCHHHHHHHHHTTCSEE
T ss_pred CCcHHHHHHHHHcCCCEEEEecCCCCcchhcCCcccCCCHHHHHHHHHhc--CCCEEEeccCCcHHHHHHHHHcCCCEE
Confidence 45889999999999999988411100 01111 24678889999887 899999988888777777778999999
No 275
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=93.60 E-value=0.16 Score=50.92 Aligned_cols=234 Identities=15% Similarity=0.152 Sum_probs=131.2
Q ss_pred hhcccceeecccc-CCCCCCccceeEc-CeeeccceEecccccccccCChhhHHHHHHHHHcCCcEEecCCCCCCHHHHH
Q 018519 41 NAFSRILFRPRIL-IDVSKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA 118 (354)
Q Consensus 41 ~~~~~i~l~pr~l-~~~~~vd~st~l~-g~~l~~Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~s~~~~~~~eei~ 118 (354)
..||++.|+|... ...+++|++|.+- +..+..|++.|||...+ +..+|.+.++.|...++.. +.++++..
T Consensus 35 ~t~~d~~~~p~~~~~~~~~~~~~t~lt~~i~l~iPivsa~MdtvT------e~~lAia~a~~GgiGvIh~--~~~~~~q~ 106 (511)
T 3usb_A 35 LTFDDVLLVPAKSDVLPREVSVKTVLSESLQLNIPLISAGMDTVT------EADMAIAMARQGGLGIIHK--NMSIEQQA 106 (511)
T ss_dssp CCGGGEEECCCCCCCCTTTSBCCEEEETTEEESSSEEECSCTTTC------SHHHHHHHHHHTCEEEECS--SSCHHHHH
T ss_pred cceEEEEEECCcccccccceEeeeEeecccccCCCccccCchhhc------HHHHHHHHHhcCCceeecc--cCCHHHHH
Confidence 3799999999754 2346799999875 68899999999997665 6789999999998888864 44554322
Q ss_pred ----hh--C-----CCceEEEEeecCChHHHHHHHHHHHHcCCCEEEEecCC-C--CCC-chhHHhhhccC---------
Q 018519 119 ----ST--G-----PGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDT-P--RLG-RREADIKNRFT--------- 174 (354)
Q Consensus 119 ----~~--~-----~~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~i~vd~-p--~~g-~r~~~~r~~~~--------- 174 (354)
+. . +.+.+ + .......+.++...+.++..+-+.=+. . ..| -..+|++....
T Consensus 107 ~~V~~V~~~~~~m~~d~v~--l---~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~~~~~~~~V~~vM 181 (511)
T 3usb_A 107 EQVDKVKRSESGVISDPFF--L---TPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRFIQDYSIKISDVM 181 (511)
T ss_dssp HHHHHHHTSSSCSSSSCCC--B---CTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTTCCCSSSBHHHHC
T ss_pred HHHHHhhccccccccCCEE--E---CCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhhhccCCCcHHHhc
Confidence 21 1 12222 1 123345677777788888887664320 0 001 01233321000
Q ss_pred -------CCCcCcccccc------CCcc-CcCcc-cc---hhhHHHHHhhhcCCccccc-----------cc--CCHHHH
Q 018519 175 -------LPPFLTLKNFQ------GLDL-GKMDE-AN---DSGLAAYVAGQIDRSLSWK-----------GV--LTAEDA 223 (354)
Q Consensus 175 -------~p~~~~~~~~~------~~~~-~~~~~-~~---~~~~~~~~~~~~~~~~~w~-----------Gi--~~~~~a 223 (354)
+|+........ +... ..+++ .. ....+++++....|.-..+ |. ...+.+
T Consensus 182 ~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~p~a~~D~~~rl~V~aavg~~~d~~era 261 (511)
T 3usb_A 182 TKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEFPNSAKDKQGRLLVGAAVGVTADAMTRI 261 (511)
T ss_dssp CCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHCTTCCBCTTSCBCCEEEECSSTTHHHHH
T ss_pred ccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhcccchhhhccceeeeeeeeeccchHHHH
Confidence 00000000000 0000 00000 00 0011222221111110000 21 236778
Q ss_pred HHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEc
Q 018519 224 RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 293 (354)
Q Consensus 224 ~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~ig 293 (354)
..+.++|+|.|+|....+ .....++.+.++++..+ ++||++ |+|.+.+++.++..+|||+|.+|
T Consensus 262 ~aLveaGvd~I~Id~a~g----~~~~v~~~i~~i~~~~~-~~~vi~-g~v~t~e~a~~~~~aGad~i~vg 325 (511)
T 3usb_A 262 DALVKASVDAIVLDTAHG----HSQGVIDKVKEVRAKYP-SLNIIA-GNVATAEATKALIEAGANVVKVG 325 (511)
T ss_dssp HHHHHTTCSEEEEECSCT----TSHHHHHHHHHHHHHCT-TSEEEE-EEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHhhccceEEeccccc----chhhhhhHHHHHHHhCC-CceEEe-eeeccHHHHHHHHHhCCCEEEEC
Confidence 889999999999964322 12334567777777653 477775 77999999999999999999874
No 276
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=93.49 E-value=0.18 Score=45.28 Aligned_cols=79 Identities=22% Similarity=0.317 Sum_probs=51.8
Q ss_pred HHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHH----------HHHHHHcCcCEEE
Q 018519 222 DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTD----------VFKALALGASGIF 291 (354)
Q Consensus 222 ~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~d----------v~kalalGAd~V~ 291 (354)
.+..+.+.|.++++.+. +.+.++++.++ ..+++++|||+-... ..+++..|||.+.
T Consensus 147 ma~~~~~~G~~g~v~~~-------------~~i~~lr~~~~-~~~i~v~gGI~~~~~~~~dq~rv~tp~~a~~aGad~iV 212 (239)
T 1dbt_A 147 YSKQAEESGLDGVVCSV-------------HEAKAIYQAVS-PSFLTVTPGIRMSEDAANDQVRVATPAIAREKGSSAIV 212 (239)
T ss_dssp HHHHHHHTTCSEEECCG-------------GGHHHHTTTSC-TTCEEEECCBCCTTSCCTTCSSCBCHHHHHHTTCSEEE
T ss_pred HHHHHHHhCCCEEEECH-------------HHHHHHHHhcC-CCcEEEeCCcCCCCCCccceeccCCHHHHHHcCCCEEE
Confidence 33445678999876421 23445555443 468999999986544 3678899999999
Q ss_pred EcHHHHHHHhhcCHHHHHHHHHHHHHHHH
Q 018519 292 IGRPVVYSLAAEGEKGVRRVLEMLREEFE 320 (354)
Q Consensus 292 igr~~l~~~~~~G~~gv~~~l~~l~~el~ 320 (354)
+||+++.+ +...+.++.+++++.
T Consensus 213 vGr~I~~a------~dp~~a~~~l~~~i~ 235 (239)
T 1dbt_A 213 VGRSITKA------EDPVKAYKAVRLEWE 235 (239)
T ss_dssp ECHHHHTS------SCHHHHHHHHHHHHH
T ss_pred EChhhcCC------CCHHHHHHHHHHHHH
Confidence 99997642 123445666665543
No 277
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=93.48 E-value=0.24 Score=45.22 Aligned_cols=38 Identities=18% Similarity=0.285 Sum_probs=27.5
Q ss_pred HHHHhhhcCCcccccccCCHHHHHHHHHhCCCEEEEec
Q 018519 201 AAYVAGQIDRSLSWKGVLTAEDARIAVQAGAAGIIVSN 238 (354)
Q Consensus 201 ~~~~~~~~~~~~~w~Gi~~~~~a~~~~~~G~d~I~vs~ 238 (354)
..+.+....|.+.--||.+++++..+.++|+|+|+|..
T Consensus 171 ~~i~~~~~iPviv~gGI~t~eda~~~~~~GAdgViVGS 208 (264)
T 1xm3_A 171 SFIIEQAKVPVIVDAGIGSPKDAAYAMELGADGVLLNT 208 (264)
T ss_dssp HHHHHHCSSCBEEESCCCSHHHHHHHHHTTCSEEEESH
T ss_pred HHHHhcCCCCEEEEeCCCCHHHHHHHHHcCCCEEEEcH
Confidence 33333333444444489999999999999999999943
No 278
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=93.48 E-value=0.61 Score=44.89 Aligned_cols=121 Identities=16% Similarity=0.054 Sum_probs=79.7
Q ss_pred cCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-CC
Q 018519 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI-DR 210 (354)
Q Consensus 132 ~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 210 (354)
..+++.+.+.++++.+.|++++-+.+++.. ..|+ ..+.++.+.+. +.
T Consensus 149 ~~~~e~~~~~a~~~~~~G~~~iKiKvG~~~----~~d~----------------------------~~v~avR~a~g~d~ 196 (389)
T 3ozy_A 149 DLTPDQAADELAGWVEQGFTAAKLKVGRAP----RKDA----------------------------ANLRAMRQRVGADV 196 (389)
T ss_dssp SCCHHHHHHHHHHHHHTTCSEEEEECCSCH----HHHH----------------------------HHHHHHHHHHCTTS
T ss_pred CCCHHHHHHHHHHHHHCCCCEEeeccCCCH----HHHH----------------------------HHHHHHHHHcCCCc
Confidence 467888888888888899999999987621 1110 11222222221 11
Q ss_pred ccccc--ccCCHHHH----HHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHH-HHhcCCccEEEcCCCCCHHHHHHHH
Q 018519 211 SLSWK--GVLTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVV-KATQGRIPVFLDGGVRRGTDVFKAL 283 (354)
Q Consensus 211 ~~~w~--Gi~~~~~a----~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~-~~~~~~i~vi~~GGi~~g~dv~kal 283 (354)
++..| +-.+.++| +.+.+.|++.|- |. ..+..++.+.+++ +.+ ++||++++.+.+..|+.+++
T Consensus 197 ~l~vDan~~~~~~~A~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~~--~iPIa~dE~i~~~~~~~~~i 266 (389)
T 3ozy_A 197 EILVDANQSLGRHDALAMLRILDEAGCYWFE-------EP-LSIDDIEGHRILRAQGT--PVRIATGENLYTRNAFNDYI 266 (389)
T ss_dssp EEEEECTTCCCHHHHHHHHHHHHHTTCSEEE-------SC-SCTTCHHHHHHHHTTCC--SSEEEECTTCCHHHHHHHHH
T ss_pred eEEEECCCCcCHHHHHHHHHHHHhcCCCEEE-------CC-CCcccHHHHHHHHhcCC--CCCEEeCCCCCCHHHHHHHH
Confidence 22222 22355555 456778988884 11 1233577788887 655 79999999999999999999
Q ss_pred HcC-cCEEEEcH
Q 018519 284 ALG-ASGIFIGR 294 (354)
Q Consensus 284 alG-Ad~V~igr 294 (354)
..| +|.|++--
T Consensus 267 ~~~~~d~v~ik~ 278 (389)
T 3ozy_A 267 RNDAIDVLQADA 278 (389)
T ss_dssp HTTCCSEECCCT
T ss_pred HcCCCCEEEeCc
Confidence 976 89998854
No 279
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=93.47 E-value=0.81 Score=40.07 Aligned_cols=151 Identities=15% Similarity=0.085 Sum_probs=84.6
Q ss_pred HHHHHHHHHcCCc---EEecCCC--CCCHHHHH---hhCC-CceEEEEeecCChHHHHHHHHHHHHcCCCEEEEecCCCC
Q 018519 91 YATARAASAAGTI---MTLSSWS--TSSVEEVA---STGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPR 161 (354)
Q Consensus 91 ~~la~aa~~~G~~---~~~s~~~--~~~~eei~---~~~~-~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~ 161 (354)
..-+++|.++|+. +++-.-| ..++++.+ +..| ...-+-+|.+.+.+.+ .+.+++.+.+.+.+|=+-+.
T Consensus 11 ~eda~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~~~~~~~VgVfvn~~~~~i---~~~~~~~~ld~vQLHG~e~~ 87 (203)
T 1v5x_A 11 LEDALLAEALGAFALGFVLAPGSRRRIAPEAARAIGEALGPFVVRVGVFRDQPPEEV---LRLMEEARLQVAQLHGEEPP 87 (203)
T ss_dssp HHHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHSCSSSEEEEEESSCCHHHH---HHHHHHTTCSEEEECSCCCH
T ss_pred HHHHHHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHHhCCCCCCEEEEEeCCCHHHH---HHHHHhhCCCEEEECCCCCH
Confidence 3567777888854 3332212 23555443 3333 4555666766665544 55567789999999843211
Q ss_pred CCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCccccc--ccCCHHHHHHHHHhCCCEEEEecC
Q 018519 162 LGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWK--GVLTAEDARIAVQAGAAGIIVSNH 239 (354)
Q Consensus 162 ~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~--Gi~~~~~a~~~~~~G~d~I~vs~~ 239 (354)
.. +..+ .. ..-.|+ .+.+.++. .+.+..+|++.++..
T Consensus 88 -----~~-------------------------------~~~l-~~---~~~vika~~v~~~~~l-~~~~~~~d~~LlD~~ 126 (203)
T 1v5x_A 88 -----EW-------------------------------AEAV-GR---FYPVIKAFPLEGPARP-EWADYPAQALLLDGK 126 (203)
T ss_dssp -----HH-------------------------------HHHH-TT---TSCEEEEEECSSSCCG-GGGGSSCSEEEEECS
T ss_pred -----HH-------------------------------HHHh-cc---CCCEEEEEEcCChHhh-hhhhcCCCEEEEcCC
Confidence 00 1111 00 011222 11111222 223334899999874
Q ss_pred -CcC--CCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcH
Q 018519 240 -GAR--QLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 294 (354)
Q Consensus 240 -gg~--~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr 294 (354)
||+ .+|| +.+.++.. .+.|++..||+ +++.+.+|+.+++.+|=+.+
T Consensus 127 ~gGtG~~fdW-----~~l~~~~~---~~~p~~LAGGL-~peNV~~ai~~~p~gVDvsS 175 (203)
T 1v5x_A 127 RPGSGEAYPR-----AWAKPLLA---TGRRVILAGGI-APENLEEVLALRPYALDLAS 175 (203)
T ss_dssp STTSCCCCCG-----GGGHHHHH---TTSCEEECSSC-CSTTHHHHHHHCCSEEEESG
T ss_pred CCCCCCccCH-----HHHHhhhc---cCCcEEEECCC-CHHHHHHHHhcCCCEEEeCC
Confidence 443 3444 44444211 26799999999 78889898877999999987
No 280
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=93.42 E-value=2 Score=38.15 Aligned_cols=130 Identities=15% Similarity=0.216 Sum_probs=78.6
Q ss_pred eecCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcC
Q 018519 130 YVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQID 209 (354)
Q Consensus 130 y~~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (354)
|...+.+.+.+-++.+.++|++.+++-+=.+- + .+ ....++++++....
T Consensus 70 Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~d----------------g----~i-----------D~~~~~~Li~~a~~ 118 (224)
T 2bdq_A 70 YNDLELRIMEEDILRAVELESDALVLGILTSN----------------N----HI-----------DTEAIEQLLPATQG 118 (224)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCSEEEECCBCTT----------------S----SB-----------CHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHcCCCEEEEeeECCC----------------C----Cc-----------CHHHHHHHHHHhCC
Confidence 65556678888899999999999988543221 1 00 01123444433222
Q ss_pred Ccccc----ccc--CCHHHH-HHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHH
Q 018519 210 RSLSW----KGV--LTAEDA-RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKA 282 (354)
Q Consensus 210 ~~~~w----~Gi--~~~~~a-~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~ka 282 (354)
-++++ |-+ .++..| +.+.+.|++.|-- +|+..-......++.|.++.+..++++.|++-|||+. ..+.+-
T Consensus 119 ~~vTFHRAFD~~~~~d~~~ale~L~~lGv~rILT--SG~~~~~~a~~g~~~L~~Lv~~a~~ri~Im~GgGV~~-~Ni~~l 195 (224)
T 2bdq_A 119 LPLVFHMAFDVIPKSDQKKSIDQLVALGFTRILL--HGSSNGEPIIENIKHIKALVEYANNRIEIMVGGGVTA-ENYQYI 195 (224)
T ss_dssp CCEEECGGGGGSCTTTHHHHHHHHHHTTCCEEEE--CSCSSCCCGGGGHHHHHHHHHHHTTSSEEEECSSCCT-TTHHHH
T ss_pred CeEEEECchhccCCcCHHHHHHHHHHcCCCEEEC--CCCCCCCcHHHHHHHHHHHHHhhCCCeEEEeCCCCCH-HHHHHH
Confidence 22222 233 444444 6789999999986 4443211234456667777666566899999999974 444444
Q ss_pred H-HcCcCEEEEc
Q 018519 283 L-ALGASGIFIG 293 (354)
Q Consensus 283 l-alGAd~V~ig 293 (354)
+ .+|++.+=..
T Consensus 196 ~~~tGv~e~H~s 207 (224)
T 2bdq_A 196 CQETGVKQAHGT 207 (224)
T ss_dssp HHHHTCCEEEET
T ss_pred HHhhCCCEEccc
Confidence 5 4799888754
No 281
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=93.41 E-value=0.19 Score=47.94 Aligned_cols=67 Identities=21% Similarity=0.216 Sum_probs=48.6
Q ss_pred HHHHHHHHh--CCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEc
Q 018519 221 EDARIAVQA--GAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 293 (354)
Q Consensus 221 ~~a~~~~~~--G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~ig 293 (354)
+.+..+.+. |+|.|.++...| .....++.+.++++..+ ++||++ |++.+.+|+.++..+|||+|.++
T Consensus 121 ~~~~~l~~~~~g~~~i~i~~~~g----~~~~~~~~i~~lr~~~~-~~~vi~-g~v~t~e~A~~a~~aGaD~I~v~ 189 (351)
T 2c6q_A 121 EQLEQILEAIPQVKYICLDVANG----YSEHFVEFVKDVRKRFP-QHTIMA-GNVVTGEMVEELILSGADIIKVG 189 (351)
T ss_dssp HHHHHHHHHCTTCCEEEEECSCT----TBHHHHHHHHHHHHHCT-TSEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHhccCCCCEEEEEecCC----CcHHHHHHHHHHHHhcC-CCeEEE-EeCCCHHHHHHHHHhCCCEEEEC
Confidence 445556666 999998853222 11234677888877653 578885 67899999999999999999775
No 282
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=93.36 E-value=0.83 Score=43.89 Aligned_cols=120 Identities=10% Similarity=-0.056 Sum_probs=78.3
Q ss_pred ChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-CCcc
Q 018519 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI-DRSL 212 (354)
Q Consensus 134 d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 212 (354)
+++.+.+.++++.+.||+++-++++.+.. +. ....+.++.+.+. +..+
T Consensus 162 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~--~~-----------------------------~~e~v~avR~avg~d~~l 210 (393)
T 2og9_A 162 PIDQLMVNASASIERGIGGIKLKVGQPDG--AL-----------------------------DIARVTAVRKHLGDAVPL 210 (393)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECCCSCH--HH-----------------------------HHHHHHHHHHHHCTTSCE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCH--HH-----------------------------HHHHHHHHHHHcCCCCEE
Confidence 67778888888889999999998753210 00 0011222222221 1222
Q ss_pred ccc--ccCCHHHHH----HHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcC
Q 018519 213 SWK--GVLTAEDAR----IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG 286 (354)
Q Consensus 213 ~w~--Gi~~~~~a~----~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalG 286 (354)
..+ +-.+.+++. .+.+.|++.|- |. ..+..++.+.++++.+ ++||++++.+.+..|+.+++..|
T Consensus 211 ~vDan~~~~~~~a~~~~~~l~~~~i~~iE-------~P-~~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~~ 280 (393)
T 2og9_A 211 MVDANQQWDRPTAQRMCRIFEPFNLVWIE-------EP-LDAYDHEGHAALALQF--DTPIATGEMLTSAAEHGDLIRHR 280 (393)
T ss_dssp EEECTTCCCHHHHHHHHHHHGGGCCSCEE-------CC-SCTTCHHHHHHHHHHC--SSCEEECTTCCSHHHHHHHHHTT
T ss_pred EEECCCCCCHHHHHHHHHHHHhhCCCEEE-------CC-CCcccHHHHHHHHHhC--CCCEEeCCCcCCHHHHHHHHHCC
Confidence 222 224566553 45567888774 11 1234678888888877 79999999999999999999987
Q ss_pred -cCEEEEcH
Q 018519 287 -ASGIFIGR 294 (354)
Q Consensus 287 -Ad~V~igr 294 (354)
+|.|++--
T Consensus 281 ~~d~v~ik~ 289 (393)
T 2og9_A 281 AADYLMPDA 289 (393)
T ss_dssp CCSEECCCH
T ss_pred CCCEEeeCc
Confidence 89998864
No 283
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=93.32 E-value=0.35 Score=43.23 Aligned_cols=80 Identities=21% Similarity=0.251 Sum_probs=52.8
Q ss_pred CHHHHHHHHHhCCCEEEEecC--CcCCCCCCcChHHHHHHHHH---HhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEc
Q 018519 219 TAEDARIAVQAGAAGIIVSNH--GARQLDYVPATIMALEEVVK---ATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 293 (354)
Q Consensus 219 ~~~~a~~~~~~G~d~I~vs~~--gg~~~~~~~~~~~~l~~i~~---~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~ig 293 (354)
..++...+...+.+.|-+-+. -|+.......+.+.+.++.+ .+..+++|+.-|||.++.|+..+...|+|++.||
T Consensus 123 e~~e~~~~~~~~~~iIayep~waiGtG~~v~t~~~d~~~~~~~~ir~~~~~~~ilyggsV~~~n~~~~~~~~giDG~LVG 202 (226)
T 1w0m_A 123 DPRTSLAAAALGPHAVAVEPPELIGTGRAVSRYKPEAIVETVGLVSRHFPEVSVITGAGIESGDDVAAALRLGTRGVLLA 202 (226)
T ss_dssp SHHHHHHHHHTCCSEEEECCGGGTTTSCCHHHHCHHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred CHHHHHHHhcCCCCEEEEcChhhhccCCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCcHHHHHHHHhCCCCEEEEC
Confidence 556667777888876655332 11110000222333333332 2335789999999999999999999999999999
Q ss_pred HHHHH
Q 018519 294 RPVVY 298 (354)
Q Consensus 294 r~~l~ 298 (354)
+.++.
T Consensus 203 ~a~l~ 207 (226)
T 1w0m_A 203 SAAVK 207 (226)
T ss_dssp HHHHT
T ss_pred HHHHC
Confidence 99885
No 284
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=93.31 E-value=0.84 Score=43.56 Aligned_cols=117 Identities=13% Similarity=0.031 Sum_probs=75.6
Q ss_pred CChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-CCc
Q 018519 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI-DRS 211 (354)
Q Consensus 133 ~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 211 (354)
.+++.+.+.++++.+.||+++.+++++.. +. + ...+.++.+... +.+
T Consensus 144 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~~---~~-~----------------------------~e~v~avr~a~g~d~~ 191 (379)
T 2rdx_A 144 RSEAETRAELARHRAAGYRQFQIKVGADW---QS-D----------------------------IDRIRACLPLLEPGEK 191 (379)
T ss_dssp SCSHHHHHHHHHHHHTTCCEEEEECCSCH---HH-H----------------------------HHHHHHHGGGSCTTCE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccCCH---HH-H----------------------------HHHHHHHHHhcCCCCE
Confidence 57788888888999999999999886521 10 0 001222222221 112
Q ss_pred cccc--ccCCHHHHH----HHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHc
Q 018519 212 LSWK--GVLTAEDAR----IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL 285 (354)
Q Consensus 212 ~~w~--Gi~~~~~a~----~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalal 285 (354)
+..+ +-.+.+++. .+.+.|+ .|- |.. + .++.+.++++.+ ++||++++.+.+..|+.+++..
T Consensus 192 l~vDan~~~~~~~a~~~~~~l~~~~i-~iE-------~P~--~-~~~~~~~l~~~~--~iPI~~de~i~~~~~~~~~i~~ 258 (379)
T 2rdx_A 192 AMADANQGWRVDNAIRLARATRDLDY-ILE-------QPC--R-SYEECQQVRRVA--DQPMKLDECVTGLHMAQRIVAD 258 (379)
T ss_dssp EEEECTTCSCHHHHHHHHHHTTTSCC-EEE-------CCS--S-SHHHHHHHHTTC--CSCEEECTTCCSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHhCCe-EEe-------CCc--C-CHHHHHHHHhhC--CCCEEEeCCcCCHHHHHHHHHc
Confidence 2222 224556654 3445676 542 111 2 678888888766 7999999999999999999998
Q ss_pred C-cCEEEEcH
Q 018519 286 G-ASGIFIGR 294 (354)
Q Consensus 286 G-Ad~V~igr 294 (354)
| +|.|++-.
T Consensus 259 ~~~d~v~ik~ 268 (379)
T 2rdx_A 259 RGAEICCLKI 268 (379)
T ss_dssp TCCSEEEEET
T ss_pred CCCCEEEEec
Confidence 7 89999954
No 285
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=93.23 E-value=0.7 Score=42.05 Aligned_cols=108 Identities=23% Similarity=0.272 Sum_probs=72.8
Q ss_pred CceEEEEeec-------CChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCccc
Q 018519 123 GIRFFQLYVY-------KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEA 195 (354)
Q Consensus 123 ~~~~~QLy~~-------~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~ 195 (354)
+..|++|+.- .|...+.+..++..+.|++.+..+.|.|+.++|..++.....+|.+.-.....++ .
T Consensus 102 ~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~Vlpy~~dd~~~akrl~~~G~~aVmPlg~pIGsG~Gi-------~ 174 (265)
T 1wv2_A 102 GHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVMVYTSDDPIIARQLAEIGCIAVMPLAGLIGSGLGI-------C 174 (265)
T ss_dssp SCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHSCCSEEEECSSSTTCCCCC-------S
T ss_pred CCCeEEEEeecCccccCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhCCCEEEeCCccCCCCCCc-------C
Confidence 4568888765 5666777777777778999998899999988888877655545532100000011 1
Q ss_pred chhhHHHHHhhhcCCcccccccCCHHHHHHHHHhCCCEEEEe
Q 018519 196 NDSGLAAYVAGQIDRSLSWKGVLTAEDARIAVQAGAAGIIVS 237 (354)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~w~Gi~~~~~a~~~~~~G~d~I~vs 237 (354)
+..-++.+++....|++.=.||.+++|+..+++.|+|+|.|.
T Consensus 175 ~~~lI~~I~e~~~vPVI~eGGI~TPsDAa~AmeLGAdgVlVg 216 (265)
T 1wv2_A 175 NPYNLRIILEEAKVPVLVDAGVGTASDAAIAMELGCEAVLMN 216 (265)
T ss_dssp CHHHHHHHHHHCSSCBEEESCCCSHHHHHHHHHHTCSEEEES
T ss_pred CHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHHHcCCCEEEEC
Confidence 122245555544455555348999999999999999999983
No 286
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=93.14 E-value=0.63 Score=41.48 Aligned_cols=80 Identities=21% Similarity=0.273 Sum_probs=52.4
Q ss_pred CHHHHHHHHHhCCCEEEEecC--CcCCCCCCcCh---HHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEc
Q 018519 219 TAEDARIAVQAGAAGIIVSNH--GARQLDYVPAT---IMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 293 (354)
Q Consensus 219 ~~~~a~~~~~~G~d~I~vs~~--gg~~~~~~~~~---~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~ig 293 (354)
..++...+...+.+.|-+-+. -|+.......+ ++...+..+.+..+++|+.-|||.++.|+..+...|+|++.||
T Consensus 126 e~~e~~~~~~~~~~iIayep~waiGtG~~v~t~~~d~~~~~~~~ir~~~~~~~ilyggsV~~~n~~~~~~~~~vDG~LVG 205 (225)
T 1hg3_A 126 NPAVSAAVAALNPDYVAVEPPELIGTGIPVSKAKPEVITNTVELVKKVNPEVKVLCGAGISTGEDVKKAIELGTVGVLLA 205 (225)
T ss_dssp SHHHHHHHHTTCCSEEEECCTTTTTTSCCTTTSCTHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEES
T ss_pred CHHHHHHHhcCCCCEEEEeChhhhccCCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCcHHHHHHHHhCCCCEEEeC
Confidence 556666777777776655442 12210001222 3322222333345799999999999999999999999999999
Q ss_pred HHHHH
Q 018519 294 RPVVY 298 (354)
Q Consensus 294 r~~l~ 298 (354)
+.++.
T Consensus 206 ~a~l~ 210 (225)
T 1hg3_A 206 SGVTK 210 (225)
T ss_dssp HHHHT
T ss_pred HHHHC
Confidence 99885
No 287
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=93.06 E-value=1.3 Score=42.46 Aligned_cols=120 Identities=9% Similarity=-0.093 Sum_probs=78.2
Q ss_pred CChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-CCc
Q 018519 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI-DRS 211 (354)
Q Consensus 133 ~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 211 (354)
.+++.+.+.++++.+.||+++-|+++... .+. ....+.++.+... +.+
T Consensus 148 ~~~~~~~~~a~~~~~~Gf~~vKik~g~~~--~~~-----------------------------~~e~v~avR~a~G~d~~ 196 (391)
T 2qgy_A 148 KDTNDYLRQIEKFYGKKYGGIKIYPMLDS--LSI-----------------------------SIQFVEKVREIVGDELP 196 (391)
T ss_dssp CCHHHHHHHHHHHHHTTCSCEEECCCCSS--HHH-----------------------------HHHHHHHHHHHHCSSSC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEccCCCh--HHH-----------------------------HHHHHHHHHHHhCCCCE
Confidence 47788888888888999999998864210 000 0011222222221 122
Q ss_pred cccc--ccCCHHHH----HHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHc
Q 018519 212 LSWK--GVLTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL 285 (354)
Q Consensus 212 ~~w~--Gi~~~~~a----~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalal 285 (354)
+..+ +-.+.+++ +.+.+.|++.|- |. ..+..++.+.++++.+ ++||++++.+.+..|+.+++..
T Consensus 197 l~vDan~~~~~~~a~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~ 266 (391)
T 2qgy_A 197 LMLDLAVPEDLDQTKSFLKEVSSFNPYWIE-------EP-VDGENISLLTEIKNTF--NMKVVTGEKQSGLVHFRELISR 266 (391)
T ss_dssp EEEECCCCSCHHHHHHHHHHHGGGCCSEEE-------CS-SCTTCHHHHHHHHHHC--SSCEEECTTCCSHHHHHHHHHT
T ss_pred EEEEcCCCCCHHHHHHHHHHHHhcCCCeEe-------CC-CChhhHHHHHHHHhhC--CCCEEEcCCcCCHHHHHHHHHc
Confidence 2222 22455555 455677888774 11 1234678888888877 8999999999999999999998
Q ss_pred C-cCEEEEc
Q 018519 286 G-ASGIFIG 293 (354)
Q Consensus 286 G-Ad~V~ig 293 (354)
| +|.|++-
T Consensus 267 ~~~d~v~ik 275 (391)
T 2qgy_A 267 NAADIFNPD 275 (391)
T ss_dssp TCCSEECCB
T ss_pred CCCCEEEEC
Confidence 7 8999984
No 288
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=93.05 E-value=3 Score=38.75 Aligned_cols=110 Identities=25% Similarity=0.289 Sum_probs=77.6
Q ss_pred CCHHHHHHHH-HhCCCEEEEec---CCcCCCCC-CcChHHHHHHHHHHhcCCccEEEcCCC-------------------
Q 018519 218 LTAEDARIAV-QAGAAGIIVSN---HGARQLDY-VPATIMALEEVVKATQGRIPVFLDGGV------------------- 273 (354)
Q Consensus 218 ~~~~~a~~~~-~~G~d~I~vs~---~gg~~~~~-~~~~~~~l~~i~~~~~~~i~vi~~GGi------------------- 273 (354)
.+|++|.... +.|+|.+-++- ||-+...+ -.-.++.|.+|.+.+ ++|++.=||=
T Consensus 153 T~Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~~g~p~L~~~~L~~I~~~~--~vpLVlHGgSsv~~~~~~~~~~~gg~~~~ 230 (305)
T 1rvg_A 153 TNPEEARIFMERTGADYLAVAIGTSHGAYKGKGRPFIDHARLERIARLV--PAPLVLHGASAVPPELVERFRASGGEIGE 230 (305)
T ss_dssp CCHHHHHHHHHHHCCSEEEECSSCCSSSBCSSSSCCCCHHHHHHHHHHC--CSCEEECSCCCCCHHHHHHHHHTTCCCCS
T ss_pred CCHHHHHHHHHHHCCCEEEEecCccccccCCCCCCccCHHHHHHHHHhc--CCCEEEeCCCCCcHHHHHHHHhhcccccc
Confidence 6899999887 59999999863 66543222 123578899999988 6999999977
Q ss_pred --CCH-HHHHHHHHcCcCEEEEcHHHHHHHhh-------cC-----H-HHHHHHHHHHHHHHHHHHHHhCCC
Q 018519 274 --RRG-TDVFKALALGASGIFIGRPVVYSLAA-------EG-----E-KGVRRVLEMLREEFELAMALSGCR 329 (354)
Q Consensus 274 --~~g-~dv~kalalGAd~V~igr~~l~~~~~-------~G-----~-~gv~~~l~~l~~el~~~m~~~G~~ 329 (354)
..+ +++.||+.+|..-|-+++-+-++... .. + .-+....+.+++.++..|..+|..
T Consensus 231 ~~G~p~e~i~~ai~~GV~KiNi~Tdl~~A~~~~vr~~~~~~~~~~dpr~~l~~~~~a~~~~v~~~~~~~gs~ 302 (305)
T 1rvg_A 231 AAGIHPEDIKKAISLGIAKINTDTDLRLAFTALIREALNKNPKEFDPRKYLGPAREAVKEVVKSRMELFGSV 302 (305)
T ss_dssp CBCCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHHCTTCCCTHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred CCCCCHHHHHHHHHCCCeEEEEChHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 444 56678999999999999976554321 11 1 123334467777888888888764
No 289
>1wx0_A Transaldolase; structural genomics, riken structural genomics/proteomics initiative, RSGI, transferas; 2.27A {Thermus thermophilus HB8} SCOP: c.1.10.1
Probab=92.87 E-value=0.28 Score=43.77 Aligned_cols=85 Identities=25% Similarity=0.177 Sum_probs=64.1
Q ss_pred ccCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhc---CCccEEEcCCCCCHHHHHHHHHcCcCEEEE
Q 018519 216 GVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQ---GRIPVFLDGGVRRGTDVFKALALGASGIFI 292 (354)
Q Consensus 216 Gi~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~---~~i~vi~~GGi~~g~dv~kalalGAd~V~i 292 (354)
-|.+.+.|..+.++|++.|.. .-||-.+++.+....+.++++..+ -+..|++. ++|++.++.++..+|+|.+-+
T Consensus 117 liFS~~Qa~~aa~AGa~~iSp--FVgRidd~g~~G~~~v~~i~~~~~~~~~~t~vl~A-S~r~~~~v~~~~l~G~d~~Ti 193 (223)
T 1wx0_A 117 LIFSANQALLAARAGASYVSP--FLGRVDDISWDGGELLREIVEMIQVQDLPVKVIAA-SIRHPRHVTEAALLGADIATM 193 (223)
T ss_dssp EECSHHHHHHHHHTTCSEEEE--BHHHHHHTTSCHHHHHHHHHHHHHHTTCSCEEEEB-CCCSHHHHHHHHHTTCSEEEE
T ss_pred EeCCHHHHHHHHHCCCeEEEe--ccchHhhcCCCHHHHHHHHHHHHHHcCCCeEEeec-ccCCHHHHHHHHHhCCCEEEC
Confidence 467999999999999997755 445544556666777777766542 24556665 599999999999999999988
Q ss_pred cHHHHHHHhhc
Q 018519 293 GRPVVYSLAAE 303 (354)
Q Consensus 293 gr~~l~~~~~~ 303 (354)
.-.++..+...
T Consensus 194 p~~~l~~l~~h 204 (223)
T 1wx0_A 194 PHAVFKQLLKH 204 (223)
T ss_dssp CHHHHHHHTCC
T ss_pred CHHHHHHHHcC
Confidence 88888776543
No 290
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=92.85 E-value=0.31 Score=42.42 Aligned_cols=66 Identities=15% Similarity=0.130 Sum_probs=49.8
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCcc-EEEcCCCCCHHHHHHHHHcCcCEEEEcH
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIP-VFLDGGVRRGTDVFKALALGASGIFIGR 294 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~-vi~~GGi~~g~dv~kalalGAd~V~igr 294 (354)
.+.++.+.+.|++.|.+... .+...+.+.++.+.. +++ ++..|++++..++-.++++|||+|.++.
T Consensus 22 ~~~~~~~~~~G~~~i~l~~~-------~~~~~~~i~~i~~~~--~~~l~vg~g~~~~~~~i~~a~~~Gad~V~~~~ 88 (212)
T 2v82_A 22 LAHVGAVIDAGFDAVEIPLN-------SPQWEQSIPAIVDAY--GDKALIGAGTVLKPEQVDALARMGCQLIVTPN 88 (212)
T ss_dssp HHHHHHHHHHTCCEEEEETT-------STTHHHHHHHHHHHH--TTTSEEEEECCCSHHHHHHHHHTTCCEEECSS
T ss_pred HHHHHHHHHCCCCEEEEeCC-------ChhHHHHHHHHHHhC--CCCeEEEeccccCHHHHHHHHHcCCCEEEeCC
Confidence 45677888999999988322 134456677776655 444 4567899999999999999999998875
No 291
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=92.80 E-value=0.073 Score=47.15 Aligned_cols=73 Identities=15% Similarity=0.175 Sum_probs=44.6
Q ss_pred HHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHH---H------HHHHHHcCcCEEEE
Q 018519 222 DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT---D------VFKALALGASGIFI 292 (354)
Q Consensus 222 ~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~---d------v~kalalGAd~V~i 292 (354)
.|+. .+.|+| ++.+. +.+.++++.++ .+ ++++||+--. | ..+ +..|||.+.+
T Consensus 131 ~a~~-~e~G~d-vV~~~-------------~~~~~ir~~~~--~~-~v~pGI~~~~~~~dq~rv~t~~~-i~aGad~iVv 191 (213)
T 1vqt_A 131 IEKL-NKLGCD-FVLPG-------------PWAKALREKIK--GK-ILVPGIRMEVKADDQKDVVTLEE-MKGIANFAVL 191 (213)
T ss_dssp HHHH-HHHTCE-EECCH-------------HHHHHHTTTCC--SC-EEECCBC---------CCBCHHH-HTTTCSEEEE
T ss_pred HHHH-hcCCCE-EEEcH-------------HHHHHHHHHCC--CC-EEECCCCCCCCccchhhcCCHHH-HHCCCCEEEE
Confidence 4556 889999 44311 44556665553 35 8889997543 2 567 8899999999
Q ss_pred cHHHHHHHhhcCHHHHHHHHHHHHHHH
Q 018519 293 GRPVVYSLAAEGEKGVRRVLEMLREEF 319 (354)
Q Consensus 293 gr~~l~~~~~~G~~gv~~~l~~l~~el 319 (354)
||++..+ +.....++.+++++
T Consensus 192 GR~I~~a------~dP~~aa~~i~~~i 212 (213)
T 1vqt_A 192 GREIYLS------ENPREKIKRIKEMR 212 (213)
T ss_dssp SHHHHTS------SCHHHHHHHHTC--
T ss_pred ChhhcCC------CCHHHHHHHHHHHh
Confidence 9998752 22334555555543
No 292
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=92.76 E-value=0.42 Score=43.90 Aligned_cols=21 Identities=38% Similarity=0.626 Sum_probs=20.2
Q ss_pred ccCCHHHHHHHHHhCCCEEEE
Q 018519 216 GVLTAEDARIAVQAGAAGIIV 236 (354)
Q Consensus 216 Gi~~~~~a~~~~~~G~d~I~v 236 (354)
||.++++++.+..+|+|+++|
T Consensus 216 GIst~e~~~~~~~~gADgvIV 236 (271)
T 3nav_A 216 GISEPAQVKQAIEAGAAGAIS 236 (271)
T ss_dssp SCCSHHHHHHHHHTTCSEEEE
T ss_pred CCCCHHHHHHHHHcCCCEEEE
Confidence 899999999999999999999
No 293
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=92.50 E-value=5.8 Score=36.30 Aligned_cols=209 Identities=22% Similarity=0.221 Sum_probs=108.2
Q ss_pred CCCCccceeEcCeeec--cceEecccccccccCChhhHHHHHHHHHcCCcEEecCCCCCCHHHHHhhCCCceEEEEeecC
Q 018519 56 VSKIDMNTTVLGFKIS--MPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYK 133 (354)
Q Consensus 56 ~~~vd~st~l~g~~l~--~Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~s~~~~~~~eei~~~~~~~~~~QLy~~~ 133 (354)
...-++.+++.+..+. .|++||-.+ ...+.+.-..+++.+++.|.-++-... ...+ ..+ ..||- .
T Consensus 20 ~~~~~~~i~i~~~~iG~~~~~vIAgpc--~~~~~e~a~~~a~~~k~~ga~~~k~~~--~kpr----ts~--~~f~g---~ 86 (276)
T 1vs1_A 20 EERRETVVEVEGVRIGGGSKAVIAGPC--SVESWEQVREAALAVKEAGAHMLRGGA--FKPR----TSP--YSFQG---L 86 (276)
T ss_dssp SSCSCCCEEETTEEEBTTBCEEEEECS--BCCCHHHHHHHHHHHHHHTCSEEECBS--SCCC----SST--TSCCC---C
T ss_pred cCCCCcEEEECCEEECCCCeEEEEecC--CCCCHHHHHHHHHHHHHhCCCEEEeEE--EeCC----CCh--hhhcC---C
Confidence 3344556666655542 477877664 222223335889999999987664321 1110 011 12331 1
Q ss_pred ChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCC-CcCccccccCCccCcCcccchhhHHHHHhhhcCCcc
Q 018519 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLP-PFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (354)
Q Consensus 134 d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (354)
..+....+.+.+++.|...+.==+|... -+.-..+ ++ -.++..++.+ ..+-+.+.+...|++
T Consensus 87 g~~gl~~l~~~~~~~Gl~~~te~~d~~~-----~~~l~~~-vd~~kIgs~~~~n-----------~~ll~~~a~~~kPV~ 149 (276)
T 1vs1_A 87 GLEGLKLLRRAGDEAGLPVVTEVLDPRH-----VETVSRY-ADMLQIGARNMQN-----------FPLLREVGRSGKPVL 149 (276)
T ss_dssp THHHHHHHHHHHHHHTCCEEEECCCGGG-----HHHHHHH-CSEEEECGGGTTC-----------HHHHHHHHHHTCCEE
T ss_pred CHHHHHHHHHHHHHcCCcEEEecCCHHH-----HHHHHHh-CCeEEECcccccC-----------HHHHHHHHccCCeEE
Confidence 2445555556667778766542222111 1111111 01 0111122211 123334445566777
Q ss_pred cccccC-CHHHHHHHH----HhCCCEEEEecCCcCCCC---CCcChHHHHHHHHHHhcCCccEEEcCC----CCC--HHH
Q 018519 213 SWKGVL-TAEDARIAV----QAGAAGIIVSNHGARQLD---YVPATIMALEEVVKATQGRIPVFLDGG----VRR--GTD 278 (354)
Q Consensus 213 ~w~Gi~-~~~~a~~~~----~~G~d~I~vs~~gg~~~~---~~~~~~~~l~~i~~~~~~~i~vi~~GG----i~~--g~d 278 (354)
...|.. +.++...++ ..|.+-|++--.|.+... .....+..++.+++.. .+||+++.+ .+. ..=
T Consensus 150 lk~G~~~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~yp~y~~~~vdl~~i~~lk~~~--~lpVi~dssH~~g~~~~~~~~ 227 (276)
T 1vs1_A 150 LKRGFGNTVEELLAAAEYILLEGNWQVVLVERGIRTFEPSTRFTLDVAAVAVLKEAT--HLPVIVDPSHPAGRRSLVPAL 227 (276)
T ss_dssp EECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCBHHHHHHHHHHB--SSCEEECCHHHHCSGGGHHHH
T ss_pred EcCCCCCCHHHHHHHHHHHHHcCCCeEEEEeCCcCCCCCcCcchhCHHHHHHHHHHh--CCCEEEeCCCCCCccchHHHH
Confidence 666874 777776554 568744444322554332 2334566777777754 689987643 332 233
Q ss_pred HHHHHHcCcCEEEEcHHH
Q 018519 279 VFKALALGASGIFIGRPV 296 (354)
Q Consensus 279 v~kalalGAd~V~igr~~ 296 (354)
.+.|+++||++++|-+.+
T Consensus 228 ~~aAva~Ga~Gl~IE~H~ 245 (276)
T 1vs1_A 228 AKAGLAAGADGLIVEVHP 245 (276)
T ss_dssp HHHHHHTTCSEEEEEBCS
T ss_pred HHHHHHcCCCEEEEEecC
Confidence 557788999999999854
No 294
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=92.47 E-value=0.5 Score=43.23 Aligned_cols=27 Identities=37% Similarity=0.512 Sum_probs=22.5
Q ss_pred ccccc-ccCCHHHHHHHHHhCCCEEEEe
Q 018519 211 SLSWK-GVLTAEDARIAVQAGAAGIIVS 237 (354)
Q Consensus 211 ~~~w~-Gi~~~~~a~~~~~~G~d~I~vs 237 (354)
++... ||.++++++.+..+|+|+++|.
T Consensus 208 pv~vGfGI~~~e~~~~~~~~gADgvVVG 235 (267)
T 3vnd_A 208 PPLLGFGIAEPEQVRAAIKAGAAGAISG 235 (267)
T ss_dssp CEEECSSCCSHHHHHHHHHTTCSEEEEC
T ss_pred CEEEECCcCCHHHHHHHHHcCCCEEEEC
Confidence 34334 8889999999999999999993
No 295
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=92.45 E-value=1.4 Score=41.62 Aligned_cols=122 Identities=18% Similarity=0.158 Sum_probs=78.1
Q ss_pred CChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-CCc
Q 018519 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI-DRS 211 (354)
Q Consensus 133 ~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 211 (354)
.+++.+.+.++++.+.||+++-++++++-. + .+ ...+.++.+... +..
T Consensus 139 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~~~--~-~d----------------------------~~~v~avr~a~g~~~~ 187 (366)
T 1tkk_A 139 NSPEEMAADAENYLKQGFQTLKIKVGKDDI--A-TD----------------------------IARIQEIRKRVGSAVK 187 (366)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCSSCH--H-HH----------------------------HHHHHHHHHHHCSSSE
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEeCCCCH--H-HH----------------------------HHHHHHHHHHhCCCCe
Confidence 577777788888888999999999875210 0 00 011222222221 112
Q ss_pred cccc--ccCCHHHH----HHHHH--hCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHH
Q 018519 212 LSWK--GVLTAEDA----RIAVQ--AGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKAL 283 (354)
Q Consensus 212 ~~w~--Gi~~~~~a----~~~~~--~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kal 283 (354)
+..| +-.+.++| +.+.+ .|++.|- |. ..+..++.+.++++.+ ++||++++.+.+..|+.+++
T Consensus 188 l~vDan~~~~~~~a~~~~~~l~~~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i 257 (366)
T 1tkk_A 188 LRLDANQGWRPKEAVTAIRKMEDAGLGIELVE-------QP-VHKDDLAGLKKVTDAT--DTPIMADESVFTPRQAFEVL 257 (366)
T ss_dssp EEEECTTCSCHHHHHHHHHHHHHTTCCEEEEE-------CC-SCTTCHHHHHHHHHHC--SSCEEECTTCCSHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHhhcCCCceEEE-------CC-CCcccHHHHHHHHhhC--CCCEEEcCCCCCHHHHHHHH
Confidence 2222 22355555 45556 5666552 21 2244678888888877 79999999999999999999
Q ss_pred HcC-cCEEEEcHH
Q 018519 284 ALG-ASGIFIGRP 295 (354)
Q Consensus 284 alG-Ad~V~igr~ 295 (354)
..| +|.|++--.
T Consensus 258 ~~~~~d~v~ik~~ 270 (366)
T 1tkk_A 258 QTRSADLINIKLM 270 (366)
T ss_dssp HHTCCSEEEECHH
T ss_pred HhCCCCEEEeehh
Confidence 976 899999653
No 296
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=92.35 E-value=2.1 Score=41.74 Aligned_cols=134 Identities=16% Similarity=0.136 Sum_probs=83.7
Q ss_pred CChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-CCc
Q 018519 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI-DRS 211 (354)
Q Consensus 133 ~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 211 (354)
.+++.+.+.++++.+.||+++-+.+++|... ..+.. |. ..++ ......++++.+.+. +..
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~------~~G~~-~~------~~~~------~~d~e~v~avR~avG~d~~ 205 (433)
T 3rcy_A 145 TSADMAAESAADCVARGYTAVKFDPAGPYTL------RGGHM-PA------MTDI------SLSVEFCRKIRAAVGDKAD 205 (433)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEECCSCCCBT------TCCBC-CC------HHHH------HHHHHHHHHHHHHHTTSSE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCccc------ccCCC-cc------hhhH------HHHHHHHHHHHHHhCCCCe
Confidence 4778888888888889999999998877420 00000 00 0000 001112333333321 223
Q ss_pred cccc--ccCCHHHHH----HHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHc
Q 018519 212 LSWK--GVLTAEDAR----IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL 285 (354)
Q Consensus 212 ~~w~--Gi~~~~~a~----~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalal 285 (354)
+..+ +-.+.++|. .+.+.|++.|- | ...+..++.+.++++.+ .+||++++-+.+..|+.+++..
T Consensus 206 L~vDan~~~t~~~A~~~~~~Le~~~i~~iE-------e-P~~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~l~~ 275 (433)
T 3rcy_A 206 LLFGTHGQFTTAGAIRLGQAIEPYSPLWYE-------E-PVPPDNVGAMAQVARAV--RIPVATGERLTTKAEFAPVLRE 275 (433)
T ss_dssp EEECCCSCBCHHHHHHHHHHHGGGCCSEEE-------C-CSCTTCHHHHHHHHHHS--SSCEEECTTCCSHHHHHHHHHT
T ss_pred EEEeCCCCCCHHHHHHHHHHhhhcCCCEEE-------C-CCChhhHHHHHHHHhcc--CCCEEecCCCCCHHHHHHHHHc
Confidence 3333 335666664 45567888774 1 11233578888888877 8999999999999999999998
Q ss_pred C-cCEEEEcHH
Q 018519 286 G-ASGIFIGRP 295 (354)
Q Consensus 286 G-Ad~V~igr~ 295 (354)
| +|.|++--.
T Consensus 276 g~~D~v~~d~~ 286 (433)
T 3rcy_A 276 GAAAILQPALG 286 (433)
T ss_dssp TCCSEECCCHH
T ss_pred CCCCEEEeCch
Confidence 7 899988753
No 297
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=92.34 E-value=4.6 Score=38.77 Aligned_cols=127 Identities=14% Similarity=0.024 Sum_probs=81.0
Q ss_pred CChHHHHHHH-HHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-CC
Q 018519 133 KDRNVVAQLV-RRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI-DR 210 (354)
Q Consensus 133 ~d~~~~~~~~-~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 210 (354)
.+++.+.+.+ +++.+.||+++-+.++++.. .. +. .. + .....+.++.+.+. +.
T Consensus 138 ~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~----------~~-~~-----~~--------~-~d~~~v~avR~a~g~~~ 192 (393)
T 4dwd_A 138 RSVDEVVREVARRVEAEQPAAVKIRWDGDRT----------RC-DV-----DI--------P-GDIAKARAVRELLGPDA 192 (393)
T ss_dssp SCHHHHHHHHHHHHHHHCCSEEEEECCCCTT----------CC-SC-----CH--------H-HHHHHHHHHHHHHCTTC
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEccCCCCc----------cc-cc-----CH--------H-HHHHHHHHHHHHhCCCC
Confidence 4567777777 77777899999999876531 00 00 00 0 01112333333321 22
Q ss_pred ccccc--ccCCHHHHH----HHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHH
Q 018519 211 SLSWK--GVLTAEDAR----IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA 284 (354)
Q Consensus 211 ~~~w~--Gi~~~~~a~----~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kala 284 (354)
.+..| +-.+.++|. .+.+.|++.|- | ...+..++.+.++++.. .+||+++.-+.+..|+.+++.
T Consensus 193 ~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE-------q-P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~ 262 (393)
T 4dwd_A 193 VIGFDANNGYSVGGAIRVGRALEDLGYSWFE-------E-PVQHYHVGAMGEVAQRL--DITVSAGEQTYTLQALKDLIL 262 (393)
T ss_dssp CEEEECTTCCCHHHHHHHHHHHHHTTCSEEE-------C-CSCTTCHHHHHHHHHHC--SSEEEBCTTCCSHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHHHHhhCCCEEE-------C-CCCcccHHHHHHHHhhC--CCCEEecCCcCCHHHHHHHHH
Confidence 33323 334666654 56678888874 1 11233577888888876 899999999999999999999
Q ss_pred cCcCEEEEcH
Q 018519 285 LGASGIFIGR 294 (354)
Q Consensus 285 lGAd~V~igr 294 (354)
.|+|.|++--
T Consensus 263 ~~~d~v~~k~ 272 (393)
T 4dwd_A 263 SGVRMVQPDI 272 (393)
T ss_dssp HTCCEECCCT
T ss_pred cCCCEEEeCc
Confidence 8899999853
No 298
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=92.33 E-value=1.4 Score=42.85 Aligned_cols=129 Identities=11% Similarity=0.015 Sum_probs=83.2
Q ss_pred CChHHHHHHHHHHHHcCCCEEEEecCCCCC-CchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-CC
Q 018519 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRL-GRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI-DR 210 (354)
Q Consensus 133 ~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~-g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 210 (354)
.+++.+.+.++++.+.||+++-+.+++... |. .+++ .....++++.+... +.
T Consensus 178 ~~~e~~~~~a~~~~~~Gf~~iKik~g~gp~dg~--~~~~------------------------~die~v~avReavG~d~ 231 (412)
T 3stp_A 178 GSIEAMQKEAEEAMKGGYKAFKSRFGYGPKDGM--PGMR------------------------ENLKRVEAVREVIGYDN 231 (412)
T ss_dssp CCHHHHHHHHHHHHTTTCSEEEEECCCCGGGHH--HHHH------------------------HHHHHHHHHHHHHCSSS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCccccc--chHH------------------------HHHHHHHHHHHHcCCCC
Confidence 477888888888888999999999875310 00 0000 01112233333321 22
Q ss_pred ccccc--ccCCHHHHH----HHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHH
Q 018519 211 SLSWK--GVLTAEDAR----IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA 284 (354)
Q Consensus 211 ~~~w~--Gi~~~~~a~----~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kala 284 (354)
++..+ +-.++++|. .+.+.|++.|- | ...+..++.+.++++.. ++||++++-+.+..|+.+.+.
T Consensus 232 ~L~vDaN~~~~~~~Ai~~~~~Le~~~i~~iE-------e-P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~li~ 301 (412)
T 3stp_A 232 DLMLECYMGWNLDYAKRMLPKLAPYEPRWLE-------E-PVIADDVAGYAELNAMN--IVPISGGEHEFSVIGCAELIN 301 (412)
T ss_dssp EEEEECTTCSCHHHHHHHHHHHGGGCCSEEE-------C-CSCTTCHHHHHHHHHTC--SSCEEECTTCCSHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHHHHhcCCCEEE-------C-CCCcccHHHHHHHHhCC--CCCEEeCCCCCCHHHHHHHHH
Confidence 33333 334666664 45667888874 1 11233578888888876 899999999999999999999
Q ss_pred cC-cCEEEEcHHHH
Q 018519 285 LG-ASGIFIGRPVV 297 (354)
Q Consensus 285 lG-Ad~V~igr~~l 297 (354)
.| +|.|++--..+
T Consensus 302 ~~a~D~v~ik~~~~ 315 (412)
T 3stp_A 302 RKAVSVLQYDTNRV 315 (412)
T ss_dssp TTCCSEECCCHHHH
T ss_pred cCCCCEEecChhhc
Confidence 87 89999876443
No 299
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=92.28 E-value=1.5 Score=42.23 Aligned_cols=120 Identities=14% Similarity=-0.008 Sum_probs=77.8
Q ss_pred ChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-CCcc
Q 018519 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI-DRSL 212 (354)
Q Consensus 134 d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 212 (354)
+++.+.+.++++.+.||+++-++++.+.. + . ....+..+.+.+. +..+
T Consensus 175 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~--~-~----------------------------d~e~v~avR~avG~d~~l 223 (398)
T 2pp0_A 175 PLDQVLKNVVISRENGIGGIKLKVGQPNC--A-E----------------------------DIRRLTAVREALGDEFPL 223 (398)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCCSCH--H-H----------------------------HHHHHHHHHHHHCSSSCE
T ss_pred CHHHHHHHHHHHHHhCCCeEEEecCCCCH--H-H----------------------------HHHHHHHHHHHcCCCCeE
Confidence 67777788888889999999998764210 0 0 0011222222221 1222
Q ss_pred ccc--ccCCHHHHH----HHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcC
Q 018519 213 SWK--GVLTAEDAR----IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG 286 (354)
Q Consensus 213 ~w~--Gi~~~~~a~----~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalG 286 (354)
..+ +-.+.+++. .+.+.|++.|- |. ..+..++.+.++++.+ ++||++++.+.+..|+.+++..|
T Consensus 224 ~vDan~~~~~~~ai~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~~ 293 (398)
T 2pp0_A 224 MVDANQQWDRETAIRMGRKMEQFNLIWIE-------EP-LDAYDIEGHAQLAAAL--DTPIATGEMLTSFREHEQLILGN 293 (398)
T ss_dssp EEECTTCSCHHHHHHHHHHHGGGTCSCEE-------CC-SCTTCHHHHHHHHHHC--SSCEEECTTCCSHHHHHHHHHTT
T ss_pred EEECCCCCCHHHHHHHHHHHHHcCCceee-------CC-CChhhHHHHHHHHhhC--CCCEEecCCcCCHHHHHHHHHcC
Confidence 222 224555553 45567887763 11 1234578888888877 79999999999999999999987
Q ss_pred -cCEEEEcH
Q 018519 287 -ASGIFIGR 294 (354)
Q Consensus 287 -Ad~V~igr 294 (354)
+|.|++--
T Consensus 294 ~~d~v~ik~ 302 (398)
T 2pp0_A 294 ASDFVQPDA 302 (398)
T ss_dssp CCSEECCCH
T ss_pred CCCEEEeCc
Confidence 89998864
No 300
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=92.22 E-value=3.4 Score=39.20 Aligned_cols=242 Identities=14% Similarity=0.106 Sum_probs=123.5
Q ss_pred eeEcCeee---ccceEecccccccccCChhhHHHHHHHHHcCCcEEecCCCCCCHHHH-Hhh---CCCc-eEEEE---ee
Q 018519 63 TTVLGFKI---SMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEV-AST---GPGI-RFFQL---YV 131 (354)
Q Consensus 63 t~l~g~~l---~~Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~s~~~~~~~eei-~~~---~~~~-~~~QL---y~ 131 (354)
+.+.|.++ ..|++||.++.....+.+--..++++|+++|+-.+=.. ....+.+ ... .... ..-|+ |.
T Consensus 7 i~i~~~~iG~~~~~~iIAe~g~NH~gs~e~a~~li~~ak~aGadavKfq--~~k~~tl~s~~~~~fq~~~~~~~~y~~~~ 84 (349)
T 2wqp_A 7 FKIGNRSVGYNHEPLIICEIGINHEGSLKTAFEMVDAAYNAGAEVVKHQ--THIVEDEMSDEAKQVIPGNADVSIYEIME 84 (349)
T ss_dssp EEETTEEEETTSCCEEEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEEE--ECCHHHHCCGGGGGCCCTTCSSCHHHHHH
T ss_pred EEECCEEECCCCceEEEEecCCcccCCHHHHHHHHHHHHHhCCCEEeee--ecccccccCcchhccccCCCCccHHHHHH
Confidence 44555555 24899998875321122223588999999998866432 2334443 111 1100 00011 10
Q ss_pred --cCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCC-CcCccccccCCccCcCcccchhhHHHHHhhhc
Q 018519 132 --YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLP-PFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI 208 (354)
Q Consensus 132 --~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (354)
.-..+....+.+.+++.|...+.--+|. +.-+.-..+.++ -+++..++.++ .+-+.+.+..
T Consensus 85 ~~~l~~e~~~~L~~~~~~~Gi~~~st~~d~-----~svd~l~~~~v~~~KI~S~~~~n~-----------~LL~~va~~g 148 (349)
T 2wqp_A 85 RCALNEEDEIKLKEYVESKGMIFISTLFSR-----AAALRLQRMDIPAYKIGSGECNNY-----------PLIKLVASFG 148 (349)
T ss_dssp HHCCCHHHHHHHHHHHHHTTCEEEEEECSH-----HHHHHHHHHTCSCEEECGGGTTCH-----------HHHHHHHTTC
T ss_pred HhCCCHHHHHHHHHHHHHhCCeEEEeeCCH-----HHHHHHHhcCCCEEEECcccccCH-----------HHHHHHHhcC
Confidence 1245666777788888887655332221 111211122111 11222232221 2334455556
Q ss_pred CCcccccccCCHHHHHHH----HHhCCCEEEEecCCcCCCCC--CcChHHHHHHHHHHhcCCccEEEcCCCCCHHH-HHH
Q 018519 209 DRSLSWKGVLTAEDARIA----VQAGAAGIIVSNHGARQLDY--VPATIMALEEVVKATQGRIPVFLDGGVRRGTD-VFK 281 (354)
Q Consensus 209 ~~~~~w~Gi~~~~~a~~~----~~~G~d~I~vs~~gg~~~~~--~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~d-v~k 281 (354)
.|.+.-.|..+.++...+ .+.|.+.+.+ |+-+.... ....+..++.+++..+ .+||..+ +=..|.. .+.
T Consensus 149 kPviLstGmat~~Ei~~Ave~i~~~G~~iiLl--hc~s~Yp~~~~~~nL~ai~~lk~~f~-~lpVg~s-dHt~G~~~~~A 224 (349)
T 2wqp_A 149 KPIILSTGMNSIESIKKSVEIIREAGVPYALL--HCTNIYPTPYEDVRLGGMNDLSEAFP-DAIIGLS-DHTLDNYACLG 224 (349)
T ss_dssp SCEEEECTTCCHHHHHHHHHHHHHHTCCEEEE--ECCCCSSCCGGGCCTHHHHHHHHHCT-TSEEEEE-CCSSSSHHHHH
T ss_pred CeEEEECCCCCHHHHHHHHHHHHHcCCCEEEE--eccCCCCCChhhcCHHHHHHHHHHCC-CCCEEeC-CCCCcHHHHHH
Confidence 676666687777776654 4678877766 54332222 1223556777776531 4788654 3333433 346
Q ss_pred HHHcCcCEEEEcHHHHHHHhhcCHHH---H-HHHHHHHHHHHHHHHHHhCC
Q 018519 282 ALALGASGIFIGRPVVYSLAAEGEKG---V-RRVLEMLREEFELAMALSGC 328 (354)
Q Consensus 282 alalGAd~V~igr~~l~~~~~~G~~g---v-~~~l~~l~~el~~~m~~~G~ 328 (354)
|+++||+ +|-+.|-..-...|.++ + -+-+..|.++++..-..+|.
T Consensus 225 AvAlGA~--iIEkH~tld~a~~G~D~~~SL~p~ef~~lv~~ir~~~~alG~ 273 (349)
T 2wqp_A 225 AVALGGS--ILERHFTDRMDRPGPDIVCSMNPDTFKELKQGAHALKLARGG 273 (349)
T ss_dssp HHHHTCC--EEEEEBCSCTTCCSTTGGGCBCHHHHHHHHHHHHHHHHHSSC
T ss_pred HHHhCCC--EEEeCCCccccCCCCChhhhCCHHHHHHHHHHHHHHHHHhCC
Confidence 7789999 55553321112223221 1 13467777888888787885
No 301
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=92.07 E-value=4.5 Score=37.65 Aligned_cols=110 Identities=19% Similarity=0.161 Sum_probs=75.1
Q ss_pred CCHHHHHHHH-HhCCCEEEEec---CCcCCCCCC-cChHHHHHHHHHHhcCCccEEEcCCC-------------------
Q 018519 218 LTAEDARIAV-QAGAAGIIVSN---HGARQLDYV-PATIMALEEVVKATQGRIPVFLDGGV------------------- 273 (354)
Q Consensus 218 ~~~~~a~~~~-~~G~d~I~vs~---~gg~~~~~~-~~~~~~l~~i~~~~~~~i~vi~~GGi------------------- 273 (354)
.+|++|.... +.|+|.+-++- ||-+...+. .-.++.|.+|.+.. ++|++.=||=
T Consensus 155 T~Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~Ld~~~L~~I~~~~--~~PLVlHGgS~vp~~~~~~~~~~gg~~~~ 232 (307)
T 3n9r_A 155 VNPKEAEQFVKESQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEVKRLT--NIPLVLHGASAIPDNVRKSYLDAGGDLKG 232 (307)
T ss_dssp CCHHHHHHHHHHHCCSEEEECSSCCSSSBCCSSSCCCCHHHHHHHHHHH--CSCEEESSCCCCCHHHHHHHHHTTCCCTT
T ss_pred CCHHHHHHHHHHHCCCEEEEecCCcccccCCCCCCccCHHHHHHHHhcC--CCCeEEeCCCCcchHHHHHHHHhcCccCC
Confidence 5899998865 69999999863 665432222 33678899996655 6999999965
Q ss_pred --CC-HHHHHHHHHcCcCEEEEcHHHHHHHhh-------cC-----H-HHHHHHHHHHHHHHHHHHHHhCCC
Q 018519 274 --RR-GTDVFKALALGASGIFIGRPVVYSLAA-------EG-----E-KGVRRVLEMLREEFELAMALSGCR 329 (354)
Q Consensus 274 --~~-g~dv~kalalGAd~V~igr~~l~~~~~-------~G-----~-~gv~~~l~~l~~el~~~m~~~G~~ 329 (354)
.. -+++.|++.+|..-|-+++-+-++... .. + .-+....+.+++.++..|..+|+.
T Consensus 233 ~~G~p~e~i~~ai~~GV~KiNi~Tdl~~a~~~~vr~~~~~~~~~~dpr~~~~~~~~a~~~~v~~~~~~~gs~ 304 (307)
T 3n9r_A 233 SKGVPFEFLQESVKGGINKVNTDTDLRIAFIAEVRKVANEDKSQFDLRKFFSPAQLALKNVVKERMKLLGSA 304 (307)
T ss_dssp CBCCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred CCCCCHHHHHHHHHcCceEEEechHHHHHHHHHHHHHHHhCCCcCCHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 33 467779999999999999976554321 11 1 112333456677777788887764
No 302
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=92.05 E-value=1.5 Score=41.58 Aligned_cols=121 Identities=16% Similarity=0.170 Sum_probs=76.7
Q ss_pred CChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-CCc
Q 018519 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI-DRS 211 (354)
Q Consensus 133 ~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 211 (354)
.+++.+.+.++++.+.||+++-++++... + .+ ...+.++.+... +.+
T Consensus 140 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~~---~-~~----------------------------~e~v~avr~a~g~~~~ 187 (369)
T 2p8b_A 140 ADPENMAEEAASMIQKGYQSFKMKVGTNV---K-ED----------------------------VKRIEAVRERVGNDIA 187 (369)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCSCH---H-HH----------------------------HHHHHHHHHHHCTTSE
T ss_pred CChHHHHHHHHHHHHcCcCEEEEEeCCCH---H-HH----------------------------HHHHHHHHHHhCCCCe
Confidence 57788888888888999999999876421 0 00 001222222221 111
Q ss_pred cccc--ccCCHHHHH-----HHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHH
Q 018519 212 LSWK--GVLTAEDAR-----IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA 284 (354)
Q Consensus 212 ~~w~--Gi~~~~~a~-----~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kala 284 (354)
+..+ +-.+.+++. .+.+.|++.|- |. ..+..++.+.++++.+ ++||++++.+.+..|+.+++.
T Consensus 188 l~vDan~~~~~~~a~~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~iPI~~dE~~~~~~~~~~~i~ 257 (369)
T 2p8b_A 188 IRVDVNQGWKNSANTLTALRSLGHLNIDWIE-------QP-VIADDIDAMAHIRSKT--DLPLMIDEGLKSSREMRQIIK 257 (369)
T ss_dssp EEEECTTTTBSHHHHHHHHHTSTTSCCSCEE-------CC-BCTTCHHHHHHHHHTC--CSCEEESTTCCSHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhCCCcEEE-------CC-CCcccHHHHHHHHHhC--CCCEEeCCCCCCHHHHHHHHH
Confidence 2111 213444554 33455666653 11 1234578888888876 899999999999999999999
Q ss_pred cC-cCEEEEcHH
Q 018519 285 LG-ASGIFIGRP 295 (354)
Q Consensus 285 lG-Ad~V~igr~ 295 (354)
.| +|.|++-..
T Consensus 258 ~~~~d~v~ik~~ 269 (369)
T 2p8b_A 258 LEAADKVNIKLM 269 (369)
T ss_dssp HTCCSEEEECHH
T ss_pred hCCCCEEEeecc
Confidence 76 899999653
No 303
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=91.69 E-value=0.41 Score=47.99 Aligned_cols=238 Identities=18% Similarity=0.212 Sum_probs=112.9
Q ss_pred hhcccceeecccc-CCCCCCccceeEc-CeeeccceEecccccccccCChhhHHHHHHHHHcCCcEEecCCCCCCHHHHH
Q 018519 41 NAFSRILFRPRIL-IDVSKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA 118 (354)
Q Consensus 41 ~~~~~i~l~pr~l-~~~~~vd~st~l~-g~~l~~Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~s~~~~~~~eei~ 118 (354)
..||++.|+|... ...++|||+|.|- +.++..||+-|||.-.+ |..||.+.++.|...++.- ++++|+.+
T Consensus 60 LTfDDVlLvP~~s~v~p~~Vdl~t~lt~~i~L~iPlvSA~MDTVT------e~~MAIamAr~GGiGvIH~--n~sie~Qa 131 (556)
T 4af0_A 60 LTYNDFLVLPGHINFPASDVSLQSKATKNIVLNTPFLSSPMDTVT------EDRMAIALALHGGLGIIHH--NCSAEEQA 131 (556)
T ss_dssp CCGGGEEECCCCCCSCGGGCCCCEEEETTEEESSCEEECCCTTTC------SHHHHHHHHHTTCEEEECC--SSCHHHHH
T ss_pred CChhhEEEccCCCCCCcccceeeeeccCCcEeCCCEEecCccccc------CHHHHHHHHHCCCeEEEcC--CCCHHHHH
Confidence 5899999999754 2346899999994 79999999999997666 7799999999999999964 56777543
Q ss_pred h------hCCCceEEE--EeecCChHHHHHHHHHHHHcCCCEEEEecCCCCC----C-chhHHhhhc-------------
Q 018519 119 S------TGPGIRFFQ--LYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRL----G-RREADIKNR------------- 172 (354)
Q Consensus 119 ~------~~~~~~~~Q--Ly~~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~----g-~r~~~~r~~------------- 172 (354)
+ .+. ..++. +.. .......+.++..++.++..+-++-+.... | .-.+|+|..
T Consensus 132 ~~V~~VKr~e-~g~i~dPvtl-~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~d~~~~V~evMT~~ 209 (556)
T 4af0_A 132 AMVRRVKKYE-NGFITDPLCL-GPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQDAETPIKSVMTTE 209 (556)
T ss_dssp HHHHHHHHCC-C--------------------------------------------------------------------
T ss_pred HHHHHHHhcc-cCccCCCeEc-CCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEecccccccccceEhhhhcccc
Confidence 2 122 11111 111 112334455555566666665544321100 0 011222200
Q ss_pred -cCCCCcCccccccCCccC-------cCcc-cchhh---HHHHHhhhcCCcccc-c-----------ccC--CHHHHHHH
Q 018519 173 -FTLPPFLTLKNFQGLDLG-------KMDE-ANDSG---LAAYVAGQIDRSLSW-K-----------GVL--TAEDARIA 226 (354)
Q Consensus 173 -~~~p~~~~~~~~~~~~~~-------~~~~-~~~~~---~~~~~~~~~~~~~~w-~-----------Gi~--~~~~a~~~ 226 (354)
...+.+.+......+..+ .++. ....+ .+.+.+....|.-.. + |+. ..+-+..+
T Consensus 210 lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~k~~~~p~A~k~d~~grL~VgAAVgv~~d~~eR~~aL 289 (556)
T 4af0_A 210 VVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKNQNYPYASKVPESKQLYCGAAIGTRPGDKDRLKLL 289 (556)
T ss_dssp ------------------------------------------------CTTCCBCTTTCCBCCEEEECSSHHHHHHHHHH
T ss_pred eEEecCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEechhhhhhhCCcchhcchhhceeeEEEeccCccHHHHHHHH
Confidence 001111111111111000 0000 00001 111111111111111 0 321 34567788
Q ss_pred HHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcH
Q 018519 227 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 294 (354)
Q Consensus 227 ~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr 294 (354)
.++|+|.|+|+..-|+ ....++.+..|++.. .+++||+ |.|.|++.+...+..|||+|-+|-
T Consensus 290 v~AGvD~iviD~ahGh----s~~v~~~i~~ik~~~-p~~~via-GNVaT~e~a~~Li~aGAD~vkVGi 351 (556)
T 4af0_A 290 AEAGLDVVVLDSSQGN----SVYQIEFIKWIKQTY-PKIDVIA-GNVVTREQAAQLIAAGADGLRIGM 351 (556)
T ss_dssp HHTTCCEEEECCSCCC----SHHHHHHHHHHHHHC-TTSEEEE-EEECSHHHHHHHHHHTCSEEEECS
T ss_pred HhcCCcEEEEeccccc----cHHHHHHHHHHHhhC-CcceEEe-ccccCHHHHHHHHHcCCCEEeecC
Confidence 9999999999764333 233467777777765 3676655 889999988888889999997763
No 304
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=91.60 E-value=7.4 Score=35.21 Aligned_cols=204 Identities=18% Similarity=0.210 Sum_probs=103.5
Q ss_pred ccceeEcCeee--ccceEecccccccccCChhhHHHHHHHHHcCCcEEecCCCCCCHHHHHhhCCCceEEEEeecCChHH
Q 018519 60 DMNTTVLGFKI--SMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNV 137 (354)
Q Consensus 60 d~st~l~g~~l--~~Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~s~~~~~~~eei~~~~~~~~~~QLy~~~d~~~ 137 (354)
++.+++.+..+ . |++||-+ ....+++.-..+++.++++|+..+--.. ... +..+ +.+| . ...+.
T Consensus 10 ~~~i~i~~~~iG~~-~~vIAgp--c~~~~~e~a~~~a~~l~~~Ga~~vk~~~--fkp----rts~--~~~~--g-~~~eg 75 (262)
T 1zco_A 10 KTVVKINDVKFGEG-FTIIAGP--CSIESREQIMKVAEFLAEVGIKVLRGGA--FKP----RTSP--YSFQ--G-YGEKA 75 (262)
T ss_dssp CCCEEETTEEETSS-CEEEEEC--SBCCCHHHHHHHHHHHHHTTCCEEECBS--SCC----CSST--TSCC--C-CTHHH
T ss_pred CceEEECCEEECCC-cEEEEeC--CCCCCHHHHHHHHHHHHHcCCCEEEEEe--ccc----CCCc--cccc--C-ccHHH
Confidence 44444544333 2 8787755 2222334446899999999987664322 111 1111 1222 1 12444
Q ss_pred HHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCC-CcCccccccCCccCcCcccchhhHHHHHhhhcCCcccccc
Q 018519 138 VAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLP-PFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKG 216 (354)
Q Consensus 138 ~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~G 216 (354)
...+.+.+++.|...+.==+| |. .. +.-..+ ++ -.++.+++.+ ..+-+.+.+...|.+...|
T Consensus 76 l~~l~~~~~~~Gl~~~te~~d-~~---~~-~~l~~~-vd~~kIga~~~~n-----------~~ll~~~a~~~kPV~lk~G 138 (262)
T 1zco_A 76 LRWMREAADEYGLVTVTEVMD-TR---HV-ELVAKY-SDILQIGARNSQN-----------FELLKEVGKVENPVLLKRG 138 (262)
T ss_dssp HHHHHHHHHHHTCEEEEECCC-GG---GH-HHHHHH-CSEEEECGGGTTC-----------HHHHHHHTTSSSCEEEECC
T ss_pred HHHHHHHHHHcCCcEEEeeCC-HH---hH-HHHHhh-CCEEEECcccccC-----------HHHHHHHHhcCCcEEEecC
Confidence 555555566777654432112 11 11 111111 01 0111122211 1122334445556666568
Q ss_pred cC-CHHHHHHHH----HhCCCEEEEecCCcCCC--C-CCcChHHHHHHHHHHhcCCccEEEcCCCCCHH-----HHH-HH
Q 018519 217 VL-TAEDARIAV----QAGAAGIIVSNHGARQL--D-YVPATIMALEEVVKATQGRIPVFLDGGVRRGT-----DVF-KA 282 (354)
Q Consensus 217 i~-~~~~a~~~~----~~G~d~I~vs~~gg~~~--~-~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~-----dv~-ka 282 (354)
.. +.+++..+. ..|..-|.+--.|++.. + .....+..++.+++.. .+||+++..=.+|. .+. .|
T Consensus 139 ~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~--~~pVi~d~sH~~g~~~~v~~~~~aA 216 (262)
T 1zco_A 139 MGNTIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELS--HLPIIVDPSHPAGRRSLVIPLAKAA 216 (262)
T ss_dssp TTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHB--SSCEEECSSTTTCSGGGHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhh--CCCEEEEcCCCCCccchHHHHHHHH
Confidence 64 888887665 56775555543454432 1 1223445677777654 68998887655554 543 56
Q ss_pred HHcCcCEEEEcHHH
Q 018519 283 LALGASGIFIGRPV 296 (354)
Q Consensus 283 lalGAd~V~igr~~ 296 (354)
.++||+++||-+-+
T Consensus 217 va~Ga~Gl~iE~H~ 230 (262)
T 1zco_A 217 YAIGADGIMVEVHP 230 (262)
T ss_dssp HHTTCSEEEEEBCS
T ss_pred HHcCCCEEEEEecC
Confidence 77999999999854
No 305
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=91.57 E-value=1.4 Score=42.33 Aligned_cols=120 Identities=20% Similarity=0.223 Sum_probs=77.4
Q ss_pred CChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-CCc
Q 018519 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI-DRS 211 (354)
Q Consensus 133 ~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 211 (354)
.+++.+.+.++++.+.||+++-++++... + .+ ...+.++.+... +..
T Consensus 144 ~~~e~~~~~a~~~~~~Gf~~vKik~g~~~---~-~~----------------------------~e~v~avR~a~g~d~~ 191 (397)
T 2qde_A 144 GEPEAVAEEALAVLREGFHFVKLKAGGPL---K-AD----------------------------IAMVAEVRRAVGDDVD 191 (397)
T ss_dssp SCHHHHHHHHHHHHHHTCSCEEEECCSCH---H-HH----------------------------HHHHHHHHHHHCTTSC
T ss_pred CCHHHHHHHHHHHHHhhhhheeecccCCH---H-HH----------------------------HHHHHHHHHhhCCCCE
Confidence 57788888888888899999999876321 0 00 011222222221 122
Q ss_pred cccc--ccCCHHHHH----HHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHc
Q 018519 212 LSWK--GVLTAEDAR----IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL 285 (354)
Q Consensus 212 ~~w~--Gi~~~~~a~----~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalal 285 (354)
+..+ +-.+.+++. .+.+.|++.|- |. ..+..++.+.++++.+ ++||++++.+.+..|+.+++..
T Consensus 192 l~vDan~~~~~~~a~~~~~~l~~~~i~~iE-------qP-~~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~ 261 (397)
T 2qde_A 192 LFIDINGAWTYDQALTTIRALEKYNLSKIE-------QP-LPAWDLDGMARLRGKV--ATPIYADESAQELHDLLAIINK 261 (397)
T ss_dssp EEEECTTCCCHHHHHHHHHHHGGGCCSCEE-------CC-SCTTCHHHHHHHHTTC--SSCEEESTTCCSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHhCCCCEEE-------CC-CChhhHHHHHHHHhhC--CCCEEEeCCcCCHHHHHHHHHc
Confidence 2222 224555554 45567888763 11 1234577788887766 7999999999999999999997
Q ss_pred C-cCEEEEcH
Q 018519 286 G-ASGIFIGR 294 (354)
Q Consensus 286 G-Ad~V~igr 294 (354)
| +|.|++--
T Consensus 262 ~~~d~v~ik~ 271 (397)
T 2qde_A 262 GAADGLMIKT 271 (397)
T ss_dssp TCCSEEEECH
T ss_pred CCCCEEEEec
Confidence 6 89999854
No 306
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=91.32 E-value=6.9 Score=37.30 Aligned_cols=119 Identities=12% Similarity=0.023 Sum_probs=74.3
Q ss_pred ChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-CCcc
Q 018519 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI-DRSL 212 (354)
Q Consensus 134 d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 212 (354)
+.+.+.+.++++.+.||+++-++++++-. + .+ ...+..+.+... +..+
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~vKik~g~~~~--~-~~----------------------------~e~v~avR~a~G~~~~l 193 (389)
T 2oz8_A 145 DDDAFVSLFSHAASIGYSAFKIKVGHRDF--D-RD----------------------------LRRLELLKTCVPAGSKV 193 (389)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCCSSH--H-HH----------------------------HHHHHHHHTTSCTTCEE
T ss_pred CHHHHHHHHHHHHHhCCCEEEEccCCCCH--H-HH----------------------------HHHHHHHHHhhCCCCeE
Confidence 67778888888889999999999865210 0 00 011222222211 1112
Q ss_pred ccc--ccCCHHHH----HHHHH--hCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHH
Q 018519 213 SWK--GVLTAEDA----RIAVQ--AGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA 284 (354)
Q Consensus 213 ~w~--Gi~~~~~a----~~~~~--~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kala 284 (354)
..+ +-.+.+++ +.+.+ .+++.|- |. ..+..++.+.++++.++ ++||++++.+ +..|+.+++.
T Consensus 194 ~vDan~~~~~~~a~~~~~~l~~~g~~i~~iE-------qP-~~~~~~~~~~~l~~~~~-~iPIa~dE~~-~~~~~~~~i~ 263 (389)
T 2oz8_A 194 MIDPNEAWTSKEALTKLVAIREAGHDLLWVE-------DP-ILRHDHDGLRTLRHAVT-WTQINSGEYL-DLQGKRLLLE 263 (389)
T ss_dssp EEECTTCBCHHHHHHHHHHHHHTTCCCSEEE-------SC-BCTTCHHHHHHHHHHCC-SSEEEECTTC-CHHHHHHHHH
T ss_pred EEECCCCCCHHHHHHHHHHHHhcCCCceEEe-------CC-CCCcCHHHHHHHHhhCC-CCCEEeCCCC-CHHHHHHHHH
Confidence 222 22345554 45566 5555442 11 12335778888887652 6999999999 9999999999
Q ss_pred cC-cCEEEEc
Q 018519 285 LG-ASGIFIG 293 (354)
Q Consensus 285 lG-Ad~V~ig 293 (354)
.| +|.|++.
T Consensus 264 ~~~~d~v~ik 273 (389)
T 2oz8_A 264 AHAADILNVH 273 (389)
T ss_dssp TTCCSEEEEC
T ss_pred cCCCCEEEEC
Confidence 87 8999996
No 307
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=91.31 E-value=1.1 Score=41.79 Aligned_cols=188 Identities=17% Similarity=0.058 Sum_probs=103.4
Q ss_pred ceEecccccccccCChhhHHHHHHHHHcCCcEEecCC------------CCCCHHHHHh-------hCCCceEEEE-eec
Q 018519 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSW------------STSSVEEVAS-------TGPGIRFFQL-YVY 132 (354)
Q Consensus 73 Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~s~~------------~~~~~eei~~-------~~~~~~~~QL-y~~ 132 (354)
..++.|.++ |...|+.+.++|...++.+. ...+++|+.. ..+.|...=+ +..
T Consensus 29 ~~i~~~~ay--------D~~sA~l~e~aG~dai~vs~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~~~pviaD~d~Gy 100 (305)
T 3ih1_A 29 EILQIPGAH--------DAMAALVARNTGFLALYLSGAAYTASKGLPDLGIVTSTEVAERARDLVRATDLPVLVDIDTGF 100 (305)
T ss_dssp SCEEEEBCS--------SHHHHHHHHHTTCSCEEECHHHHHHHHTCCSSSCSCHHHHHHHHHHHHHHHCCCEEEECTTCS
T ss_pred CcEEEecCc--------CHHHHHHHHHcCCCEEEECcHHHHHhCCCCCCCcCCHHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 345566554 45799999999987665321 1235665532 2222222211 112
Q ss_pred CChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCcc
Q 018519 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (354)
Q Consensus 133 ~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (354)
.++....+.+++.+++|+.++-|-=... |+..+-...+.+ . +.......++..++. .+.+
T Consensus 101 g~~~~v~~~v~~l~~aGaagv~iED~~~---------------~krcGh~~gk~l--~-~~~e~~~rI~Aa~~A--~~~~ 160 (305)
T 3ih1_A 101 GGVLNVARTAVEMVEAKVAAVQIEDQQL---------------PKKCGHLNGKKL--V-TTEELVQKIKAIKEV--APSL 160 (305)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEECBCS---------------SCCTTCTTCCCB--C-CHHHHHHHHHHHHHH--CTTS
T ss_pred CCHHHHHHHHHHHHHhCCcEEEECCCCC---------------CcccCCCCCCcc--c-CHHHHHHHHHHHHHc--CCCe
Confidence 4566677888889999999887752111 111000000000 0 000112234444443 2222
Q ss_pred ccc---------cc-CCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEc---CCCCCHHHH
Q 018519 213 SWK---------GV-LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD---GGVRRGTDV 279 (354)
Q Consensus 213 ~w~---------Gi-~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~---GGi~~g~dv 279 (354)
... |+ -..+.++...++|||+|.+ ++ +++.+.+.++.+.+ ++|++++ +|-.-.-.+
T Consensus 161 ~I~ARtda~~~~g~~~ai~Ra~ay~eAGAD~i~~--e~-------~~~~~~~~~i~~~~--~~P~~~n~~~~g~tp~~~~ 229 (305)
T 3ih1_A 161 YIVARTDARGVEGLDEAIERANAYVKAGADAIFP--EA-------LQSEEEFRLFNSKV--NAPLLANMTEFGKTPYYSA 229 (305)
T ss_dssp EEEEEECCHHHHCHHHHHHHHHHHHHHTCSEEEE--TT-------CCSHHHHHHHHHHS--CSCBEEECCTTSSSCCCCH
T ss_pred EEEEeeccccccCHHHHHHHHHHHHHcCCCEEEE--cC-------CCCHHHHHHHHHHc--CCCEEEeecCCCCCCCCCH
Confidence 111 21 2456778889999999999 43 45678888999888 6788753 443222234
Q ss_pred HHHHHcCcCEEEEcHHHHHH
Q 018519 280 FKALALGASGIFIGRPVVYS 299 (354)
Q Consensus 280 ~kalalGAd~V~igr~~l~~ 299 (354)
.+.-++|.+.|..|...+.+
T Consensus 230 ~eL~~lGv~~v~~~~~~~ra 249 (305)
T 3ih1_A 230 EEFANMGFQMVIYPVTSLRV 249 (305)
T ss_dssp HHHHHTTCSEEEECSHHHHH
T ss_pred HHHHHcCCCEEEEchHHHHH
Confidence 44456999999999876654
No 308
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=91.21 E-value=1.8 Score=40.94 Aligned_cols=122 Identities=22% Similarity=0.187 Sum_probs=77.6
Q ss_pred CChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-CCc
Q 018519 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI-DRS 211 (354)
Q Consensus 133 ~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 211 (354)
.+++.+.+.++++.+.||+++-+.+++.. ..|+ ..+.++.+... +..
T Consensus 138 ~~~~~~~~~a~~~~~~G~~~~K~K~g~~~----~~d~----------------------------~~v~avR~a~g~~~~ 185 (354)
T 3jva_A 138 DEPNVMAQKAVEKVKLGFDTLKIKVGTGI----EADI----------------------------ARVKAIREAVGFDIK 185 (354)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCSCH----HHHH----------------------------HHHHHHHHHHCTTSE
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEEeCCCH----HHHH----------------------------HHHHHHHHHcCCCCe
Confidence 57788888888888899999999887531 1111 11222222221 112
Q ss_pred cccc--ccCCHHHHHHH----HHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHc
Q 018519 212 LSWK--GVLTAEDARIA----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL 285 (354)
Q Consensus 212 ~~w~--Gi~~~~~a~~~----~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalal 285 (354)
+..| +-.+.++|.+. .+.|++.|- | ...+..++.+.++++.. ++||++++.+.+..|+.+.+..
T Consensus 186 l~vDan~~~~~~~a~~~~~~L~~~~i~~iE-------q-P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~l~~ 255 (354)
T 3jva_A 186 LRLDANQAWTPKDAVKAIQALADYQIELVE-------Q-PVKRRDLEGLKYVTSQV--NTTIMADESCFDAQDALELVKK 255 (354)
T ss_dssp EEEECTTCSCHHHHHHHHHHTTTSCEEEEE-------C-CSCTTCHHHHHHHHHHC--SSEEEESTTCCSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHhcCCCEEE-------C-CCChhhHHHHHHHHHhC--CCCEEEcCCcCCHHHHHHHHHc
Confidence 2222 22466666543 344555543 1 11233577888888876 7999999999999999999997
Q ss_pred C-cCEEEEcHHH
Q 018519 286 G-ASGIFIGRPV 296 (354)
Q Consensus 286 G-Ad~V~igr~~ 296 (354)
| +|.|++--..
T Consensus 256 ~~~d~v~~k~~~ 267 (354)
T 3jva_A 256 GTVDVINIKLMK 267 (354)
T ss_dssp TCCSEEEECHHH
T ss_pred CCCCEEEECchh
Confidence 6 7999997533
No 309
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=91.16 E-value=5.5 Score=37.77 Aligned_cols=120 Identities=18% Similarity=0.202 Sum_probs=76.7
Q ss_pred CChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-CCc
Q 018519 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI-DRS 211 (354)
Q Consensus 133 ~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 211 (354)
.+++.+.+.++++.+.||+++.+++++|-. +. + ...+.++.+... +.+
T Consensus 144 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~--~~-~----------------------------~e~v~avr~a~g~~~~ 192 (378)
T 2qdd_A 144 GTPDQMLGLIAEAAAQGYRTHSAKIGGSDP--AQ-D----------------------------IARIEAISAGLPDGHR 192 (378)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCSSCH--HH-H----------------------------HHHHHHHHHSCCTTCE
T ss_pred CCHHHHHHHHHHHHHHhhhheeecCCCCCh--HH-H----------------------------HHHHHHHHHHhCCCCE
Confidence 578888888888888999999999876410 00 0 011222222221 112
Q ss_pred cccc--ccCCHHHHHHHHH---hCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcC
Q 018519 212 LSWK--GVLTAEDARIAVQ---AGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG 286 (354)
Q Consensus 212 ~~w~--Gi~~~~~a~~~~~---~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalG 286 (354)
+..| +-.+.+++.+..+ .|+ .|- |. -+ .++.+.++++.+ ++||++++.+.+..|+.+++..|
T Consensus 193 l~vDan~~~~~~~a~~~~~~l~~~i-~iE-------qP--~~-d~~~~~~l~~~~--~iPI~~dE~~~~~~~~~~~i~~~ 259 (378)
T 2qdd_A 193 VTFDVNRAWTPAIAVEVLNSVRARD-WIE-------QP--CQ-TLDQCAHVARRV--ANPIMLDECLHEFSDHLAAWSRG 259 (378)
T ss_dssp EEEECTTCCCHHHHHHHHTSCCCCC-EEE-------CC--SS-SHHHHHHHHTTC--CSCEEECTTCCSHHHHHHHHHHT
T ss_pred EEEeCCCCCCHHHHHHHHHHhCCCc-EEE-------cC--CC-CHHHHHHHHHhC--CCCEEECCCcCCHHHHHHHHHhC
Confidence 2222 2246677654432 344 331 11 12 778888888766 79999999999999999999976
Q ss_pred -cCEEEEcHHH
Q 018519 287 -ASGIFIGRPV 296 (354)
Q Consensus 287 -Ad~V~igr~~ 296 (354)
+|.|++-...
T Consensus 260 ~~d~v~ik~~~ 270 (378)
T 2qdd_A 260 ACEGVKIKPNR 270 (378)
T ss_dssp CCSEEEECHHH
T ss_pred CCCEEEecccc
Confidence 8999996543
No 310
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=91.15 E-value=1.3 Score=41.62 Aligned_cols=190 Identities=21% Similarity=0.153 Sum_probs=106.0
Q ss_pred ceEecccccccccCChhhHHHHHHHHHcCCcEEecCC---C----------CCCHHHHH-------hhCC-CceEEEE-e
Q 018519 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSW---S----------TSSVEEVA-------STGP-GIRFFQL-Y 130 (354)
Q Consensus 73 Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~s~~---~----------~~~~eei~-------~~~~-~~~~~QL-y 130 (354)
..++.|.++ |...|+.+.++|...++.+. + ..+++|+. +..+ -|...=+ +
T Consensus 39 ~~i~~~~ay--------D~~sA~i~e~aGfdai~vs~~~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~~PviaD~d~ 110 (318)
T 1zlp_A 39 GSVLMPGVQ--------DALSAAVVEKTGFHAAFVSGYSVSAAMLGLPDFGLLTTTEVVEATRRITAAAPNLCVVVDGDT 110 (318)
T ss_dssp SSEEEEEEC--------SHHHHHHHHHTTCSEEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHHHSSSSEEEEECTT
T ss_pred CcEEEecCC--------CHHHHHHHHHcCCCEEEECcHHHhhHhcCCCCCCCCCHHHHHHHHHHHHhhccCCCEEEeCCC
Confidence 345566655 45899999999987665332 1 13555543 3332 2222211 1
Q ss_pred ecCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCC
Q 018519 131 VYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDR 210 (354)
Q Consensus 131 ~~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (354)
.+.++....+.+++.+++|+.++-|- |... |+..+ .+.+-... +.......++..+.....+
T Consensus 111 Gyg~~~~v~~tv~~l~~aGaagv~iE-D~~~--------------~k~cg--H~~gk~L~-p~~e~~~rI~Aa~~A~~~~ 172 (318)
T 1zlp_A 111 GGGGPLNVQRFIRELISAGAKGVFLE-DQVW--------------PKKCG--HMRGKAVV-PAEEHALKIAAAREAIGDS 172 (318)
T ss_dssp CSSSHHHHHHHHHHHHHTTCCEEEEE-CBCS--------------SCCCS--SSSCCCBC-CHHHHHHHHHHHHHHHTTS
T ss_pred CCCCHHHHHHHHHHHHHcCCcEEEEC-CCCC--------------Ccccc--CCCCCccC-CHHHHHHHHHHHHHhcccC
Confidence 12367777888899999999988775 2211 11100 00000000 0001112344444433223
Q ss_pred ccccc---------cc-CCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEE---cCCCCCHH
Q 018519 211 SLSWK---------GV-LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL---DGGVRRGT 277 (354)
Q Consensus 211 ~~~w~---------Gi-~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~---~GGi~~g~ 277 (354)
.+... |+ -..++++...++|||.|++ + ++++.+.+.++.+.+ ++|+++ .+|-...-
T Consensus 173 ~~~I~ARtda~a~~gl~~ai~Ra~Ay~eAGAd~i~~--e-------~~~~~e~~~~i~~~l--~~P~lan~~~~g~~~~~ 241 (318)
T 1zlp_A 173 DFFLVARTDARAPHGLEEGIRRANLYKEAGADATFV--E-------APANVDELKEVSAKT--KGLRIANMIEGGKTPLH 241 (318)
T ss_dssp CCEEEEEECTHHHHHHHHHHHHHHHHHHTTCSEEEE--C-------CCCSHHHHHHHHHHS--CSEEEEEECTTSSSCCC
T ss_pred CcEEEEeeHHhhhcCHHHHHHHHHHHHHcCCCEEEE--c-------CCCCHHHHHHHHHhc--CCCEEEEeccCCCCCCC
Confidence 22211 21 2456788899999999999 3 346678888999988 689854 34322223
Q ss_pred HHHHHHHcCcCEEEEcHHHHHH
Q 018519 278 DVFKALALGASGIFIGRPVVYS 299 (354)
Q Consensus 278 dv~kalalGAd~V~igr~~l~~ 299 (354)
+..+.-++|.+.|.++...+.+
T Consensus 242 ~~~eL~~lGv~~v~~~~~~~ra 263 (318)
T 1zlp_A 242 TPEEFKEMGFHLIAHSLTAVYA 263 (318)
T ss_dssp CHHHHHHHTCCEEEECSHHHHH
T ss_pred CHHHHHHcCCeEEEEchHHHHH
Confidence 3445556999999999876654
No 311
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=91.13 E-value=1.3 Score=42.14 Aligned_cols=259 Identities=17% Similarity=0.188 Sum_probs=134.3
Q ss_pred ccccCCccchHHH-HHhHhhcccceeeccccC-------CCCCCccceeEcCeeec--cceEecccccccccCChhhHHH
Q 018519 24 DYYASGAEDQWTL-QENRNAFSRILFRPRILI-------DVSKIDMNTTVLGFKIS--MPIMIAPTAMQKMAHPEGEYAT 93 (354)
Q Consensus 24 ~y~~~ga~~~~t~-~~N~~~~~~i~l~pr~l~-------~~~~vd~st~l~g~~l~--~Pi~iAPm~~~~l~~~~~e~~l 93 (354)
..+-|--||+..+ .....++.-+.=+-|+.. ....-++.+++.+..+. .|++||-.+. .-..+--..+
T Consensus 48 ~~~ig~~g~~~~~~~~~~~~~~~v~~~~~i~~~~k~~sr~~~~~~~~i~i~~~~iG~~~~~vIAgpcs--~es~e~a~~~ 125 (350)
T 1vr6_A 48 RTVIGIIGDDRYVVADKFESLDCVESVVRVLKPYKLVSREFHPEDTVIDLGDVKIGNGYFTIIAGPCS--VEGREMLMET 125 (350)
T ss_dssp CEEEEEEEEESSCCHHHHHTSTTEEEEEECSCSCCTTBTTTCCSCCCEECSSCEESTTEEEEEEECSB--CCCHHHHHHH
T ss_pred eEEEEEECCcCcCCHHHhhCCccceeeccCCCChhhhhhhcCCcCCEEEECCEEECCCCeEEEEeCCC--cCCHHHHHHH
Confidence 3445556776655 344455555443333332 23344555666655442 3777776543 2233444689
Q ss_pred HHHHHHcCCcEEecC-CCC---------CCHH---HHHhhCC--CceEEEEeecCChHHHHHHHHHHHHcCCCEEEEecC
Q 018519 94 ARAASAAGTIMTLSS-WST---------SSVE---EVASTGP--GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVD 158 (354)
Q Consensus 94 a~aa~~~G~~~~~s~-~~~---------~~~e---ei~~~~~--~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~i~vd 158 (354)
++.++++|.-++-.. +.. ...+ .+.+... +..++- -.-|+... +.+.+. ++.+.|--
T Consensus 126 a~~~k~aGa~~vr~q~fKprTs~~~f~glg~egl~~l~~~~~e~Gl~~~t--e~~d~~~~----~~l~~~-vd~lkIgA- 197 (350)
T 1vr6_A 126 AHFLSELGVKVLRGGAYKPRTSPYSFQGLGEKGLEYLREAADKYGMYVVT--EALGEDDL----PKVAEY-ADIIQIGA- 197 (350)
T ss_dssp HHHHHHTTCCEEECBSCCCCCSTTSCCCCTHHHHHHHHHHHHHHTCEEEE--ECSSGGGH----HHHHHH-CSEEEECG-
T ss_pred HHHHHHcCCCeeeeeEEeCCCChHhhcCCCHHHHHHHHHHHHHcCCcEEE--EeCCHHHH----HHHHHh-CCEEEECc-
Confidence 999999998766421 111 1122 2222221 333321 12355443 333444 66666521
Q ss_pred CCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCcccccccC-CHHHHHHH----HHhCCCE
Q 018519 159 TPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKGVL-TAEDARIA----VQAGAAG 233 (354)
Q Consensus 159 ~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~Gi~-~~~~a~~~----~~~G~d~ 233 (354)
| ++.+. .+-+.+.+...|.+...|.. +.++...+ ...|.+-
T Consensus 198 ------r-----------------~~~n~-----------~LL~~va~~~kPVilk~G~~~tl~ei~~Ave~i~~~GN~~ 243 (350)
T 1vr6_A 198 ------R-----------------NAQNF-----------RLLSKAGSYNKPVLLKRGFMNTIEEFLLSAEYIANSGNTK 243 (350)
T ss_dssp ------G-----------------GTTCH-----------HHHHHHHTTCSCEEEECCTTCCHHHHHHHHHHHHHTTCCC
T ss_pred ------c-----------------cccCH-----------HHHHHHHccCCcEEEcCCCCCCHHHHHHHHHHHHHCCCCe
Confidence 1 11111 12222334556666666864 77776655 4578877
Q ss_pred EEEecCCcCCCC---CCcChHHHHHHHHHHhcCCccEEEcCCCCCH------HHHHHHHHcCcCEEEEcHHHHHHHh-hc
Q 018519 234 IIVSNHGARQLD---YVPATIMALEEVVKATQGRIPVFLDGGVRRG------TDVFKALALGASGIFIGRPVVYSLA-AE 303 (354)
Q Consensus 234 I~vs~~gg~~~~---~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g------~dv~kalalGAd~V~igr~~l~~~~-~~ 303 (354)
|++.-||.+... .-...+..++.+++.. .+||+++.+=.+| .=...|+++||++++|-+-+--.-+ +.
T Consensus 244 viLceRG~~typ~~~~~~vdl~ai~~lk~~~--~lpVi~dssHs~G~~~~v~~~a~AAvA~GA~Gl~IE~H~~pd~al~D 321 (350)
T 1vr6_A 244 IILCERGIRTFEKATRNTLDISAVPIIRKES--HLPILVDPSHSGGRRDLVIPLSRAAIAVGAHGIIVEVHPEPEKALSD 321 (350)
T ss_dssp EEEEECCBCCSCCSSSSBCCTTHHHHHHHHB--SSCEEECHHHHHCSGGGHHHHHHHHHHHTCSEEEEEBCSCGGGCSSC
T ss_pred EEEEeCCCCCCCCcChhhhhHHHHHHHHHhh--CCCEEEeCCCCCcccchHHHHHHHHHHhCCCEEEEEecCCcccCCCc
Confidence 777656765432 1223455677777654 6899885432222 3355778899999999985422111 13
Q ss_pred CHHHH-HHHHHHHHHHHHHHHHHhCC
Q 018519 304 GEKGV-RRVLEMLREEFELAMALSGC 328 (354)
Q Consensus 304 G~~gv-~~~l~~l~~el~~~m~~~G~ 328 (354)
|...+ -+-++.|.++++..-...|.
T Consensus 322 ~~~sL~p~e~~~lv~~ir~i~~alg~ 347 (350)
T 1vr6_A 322 GKQSLDFELFKELVQEMKKLADALGV 347 (350)
T ss_dssp GGGCBCHHHHHHHHHHHHHHHHHHTC
T ss_pred hhhcCCHHHHHHHHHHHHHHHHHhCc
Confidence 32111 12456666677766666663
No 312
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=91.12 E-value=1.2 Score=42.65 Aligned_cols=104 Identities=15% Similarity=0.105 Sum_probs=58.9
Q ss_pred CceEEEEeecCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHH
Q 018519 123 GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAA 202 (354)
Q Consensus 123 ~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (354)
.|.++-|-+..+.+.+.+.++.++++|+++|.++=-.. + |.. ...|. .. ....+++..........-+.+
T Consensus 221 ~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ntt~--~-r~~-----~~~~~-~~-~~~gGlSG~~i~p~a~~~v~~ 290 (367)
T 3zwt_A 221 PAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTV--S-RPA-----GLQGA-LR-SETGGLSGKPLRDLSTQTIRE 290 (367)
T ss_dssp CEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEECCCBS--C-CCT-----TCCCT-TT-TSSSEEEEGGGHHHHHHHHHH
T ss_pred ceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCc--c-ccc-----ccccc-cc-cccCCcCCcccchhHHHHHHH
Confidence 57788876555666788899999999999998862211 0 100 00000 00 000001000000001112344
Q ss_pred HHhhh--cCCcccccccCCHHHHHHHHHhCCCEEEE
Q 018519 203 YVAGQ--IDRSLSWKGVLTAEDARIAVQAGAAGIIV 236 (354)
Q Consensus 203 ~~~~~--~~~~~~w~Gi~~~~~a~~~~~~G~d~I~v 236 (354)
+.+.+ ..|.+.-.||.+.+||..++++|||+|.|
T Consensus 291 i~~~v~~~ipvI~~GGI~s~~da~~~l~~GAd~V~v 326 (367)
T 3zwt_A 291 MYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQL 326 (367)
T ss_dssp HHHHTTTCSCEEEESSCCSHHHHHHHHHHTCSEEEE
T ss_pred HHHHcCCCceEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 44444 34555555899999999999999999998
No 313
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=90.91 E-value=3.3 Score=39.49 Aligned_cols=120 Identities=15% Similarity=0.067 Sum_probs=75.7
Q ss_pred cCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-CC
Q 018519 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI-DR 210 (354)
Q Consensus 132 ~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 210 (354)
..+++.+.+.++++.+.|++++-+.+++.. ..|+. .+.++.+... +.
T Consensus 143 ~~~~e~~~~~a~~~~~~G~~~iKiK~G~~~----~~d~~----------------------------~v~avR~a~g~~~ 190 (378)
T 3eez_A 143 AKSVEETRAVIDRYRQRGYVAHSVKIGGDV----ERDIA----------------------------RIRDVEDIREPGE 190 (378)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEECCSCH----HHHHH----------------------------HHHHHTTSCCTTC
T ss_pred CCCHHHHHHHHHHHHhCCCCEEEeccCCCH----HHHHH----------------------------HHHHHHHHcCCCc
Confidence 357888888888888899999999988631 11110 1111111110 11
Q ss_pred ccccc--ccCCHHHHH----HHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHH
Q 018519 211 SLSWK--GVLTAEDAR----IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA 284 (354)
Q Consensus 211 ~~~w~--Gi~~~~~a~----~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kala 284 (354)
.+..| +-.+.++|. .+.+.|+ .|- |. .+.++.+.++++.+ ++||++++.+.+..|+.+++.
T Consensus 191 ~l~vDan~~~~~~~a~~~~~~l~~~~i-~iE-------qP---~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~l~ 257 (378)
T 3eez_A 191 IVLYDVNRGWTRQQALRVMRATEDLHV-MFE-------QP---GETLDDIAAIRPLH--SAPVSVDECLVTLQDAARVAR 257 (378)
T ss_dssp EEEEECTTCCCHHHHHHHHHHTGGGTC-CEE-------CC---SSSHHHHHHTGGGC--CCCEEECTTCCSHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHHhccCCe-EEe-------cC---CCCHHHHHHHHhhC--CCCEEECCCCCCHHHHHHHHH
Confidence 12112 223555554 3445565 442 11 12567777777665 799999999999999999999
Q ss_pred cC-cCEEEEcHHH
Q 018519 285 LG-ASGIFIGRPV 296 (354)
Q Consensus 285 lG-Ad~V~igr~~ 296 (354)
.| +|.|++....
T Consensus 258 ~~~~d~v~ik~~~ 270 (378)
T 3eez_A 258 DGLAEVFGIKLNR 270 (378)
T ss_dssp TTCCSEEEEEHHH
T ss_pred cCCCCEEEeCchh
Confidence 87 8999998644
No 314
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=90.85 E-value=5 Score=38.25 Aligned_cols=122 Identities=16% Similarity=0.143 Sum_probs=77.9
Q ss_pred cCChHHHHHHHHHHHHc-CCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-C
Q 018519 132 YKDRNVVAQLVRRAERA-GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI-D 209 (354)
Q Consensus 132 ~~d~~~~~~~~~~a~~~-G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 209 (354)
..+++.+.+.++++.+. ||+++-+.++.+.. ..| ...+.++.+... +
T Consensus 146 ~~~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~---~~d----------------------------~~~v~avR~a~g~~ 194 (383)
T 3i4k_A 146 VLPLDVAVAEIEERIEEFGNRSFKLKMGAGDP---AED----------------------------TRRVAELAREVGDR 194 (383)
T ss_dssp SCCHHHHHHHHHHHHHHHCCSEEEEECCSSCH---HHH----------------------------HHHHHHHHHTTTTT
T ss_pred CCCHHHHHHHHHHHHHhcCCcEEEEeeCCCCH---HHH----------------------------HHHHHHHHHHcCCC
Confidence 35677777777666666 99999998875311 111 111222222221 1
Q ss_pred Cccccc--ccCCHHHH----HHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHH
Q 018519 210 RSLSWK--GVLTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKAL 283 (354)
Q Consensus 210 ~~~~w~--Gi~~~~~a----~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kal 283 (354)
..+..| +-.+.++| +.+.+.|++.|- | ...+..++.+.++++.. .+||++++.+.+..|+.+++
T Consensus 195 ~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iE-------q-P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i 264 (383)
T 3i4k_A 195 VSLRIDINARWDRRTALHYLPILAEAGVELFE-------Q-PTPADDLETLREITRRT--NVSVMADESVWTPAEALAVV 264 (383)
T ss_dssp SEEEEECTTCSCHHHHHHHHHHHHHTTCCEEE-------S-CSCTTCHHHHHHHHHHH--CCEEEESTTCSSHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhcCCCEEE-------C-CCChhhHHHHHHHHhhC--CCCEEecCccCCHHHHHHHH
Confidence 122222 22455554 456778988874 1 11233577888888877 79999999999999999999
Q ss_pred HcC-cCEEEEcH
Q 018519 284 ALG-ASGIFIGR 294 (354)
Q Consensus 284 alG-Ad~V~igr 294 (354)
..| +|.|++--
T Consensus 265 ~~~~~d~v~~k~ 276 (383)
T 3i4k_A 265 KAQAADVIALKT 276 (383)
T ss_dssp HHTCCSEEEECT
T ss_pred HcCCCCEEEEcc
Confidence 987 89999864
No 315
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=90.83 E-value=4.2 Score=38.03 Aligned_cols=118 Identities=19% Similarity=0.140 Sum_probs=76.6
Q ss_pred CChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCcc
Q 018519 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (354)
Q Consensus 133 ~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (354)
.+++.+.+.++++.+.||+++-++++... + .++ ..+.++.+.-.+..+
T Consensus 138 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~~---~-~d~----------------------------~~v~avr~~g~~~~l 185 (345)
T 2zad_A 138 DTVENRVKEAKKIFEEGFRVIKIKVGENL---K-EDI----------------------------EAVEEIAKVTRGAKY 185 (345)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCSCH---H-HHH----------------------------HHHHHHHHHSTTCEE
T ss_pred CCHHHHHHHHHHHHHcCcCEEEEeecCCH---H-HHH----------------------------HHHHHHHhhCCCCeE
Confidence 47777778888888899999999876411 1 110 012222221001112
Q ss_pred ccc--ccCCHHHH----HHHHHhCCC--EEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHH
Q 018519 213 SWK--GVLTAEDA----RIAVQAGAA--GIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA 284 (354)
Q Consensus 213 ~w~--Gi~~~~~a----~~~~~~G~d--~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kala 284 (354)
..+ +-.+.++| +.+.+.|++ .|- |. ..+..++.+.++++.+ ++||++++.+.+..|+.+.+.
T Consensus 186 ~vDan~~~~~~~a~~~~~~l~~~~i~~~~iE-------~P-~~~~~~~~~~~l~~~~--~ipia~dE~~~~~~~~~~~i~ 255 (345)
T 2zad_A 186 IVDANMGYTQKEAVEFARAVYQKGIDIAVYE-------QP-VRREDIEGLKFVRFHS--PFPVAADESARTKFDVMRLVK 255 (345)
T ss_dssp EEECTTCSCHHHHHHHHHHHHHTTCCCSEEE-------CC-SCTTCHHHHHHHHHHS--SSCEEESTTCCSHHHHHHHHH
T ss_pred EEECCCCCCHHHHHHHHHHHHhcCCCeeeee-------CC-CCcccHHHHHHHHHhC--CCCEEEeCCcCCHHHHHHHHH
Confidence 122 22355554 456778888 653 11 1234577888888877 899999999999999999999
Q ss_pred cC-cCEEEE
Q 018519 285 LG-ASGIFI 292 (354)
Q Consensus 285 lG-Ad~V~i 292 (354)
.| +|.|++
T Consensus 256 ~~~~d~v~i 264 (345)
T 2zad_A 256 EEAVDYVNI 264 (345)
T ss_dssp HTCCSEEEE
T ss_pred hCCCCEEEE
Confidence 87 899999
No 316
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=90.68 E-value=0.69 Score=42.56 Aligned_cols=91 Identities=10% Similarity=0.108 Sum_probs=54.2
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCCCcCh---HHHHHHHHHHhcCCccEEEcCCCCCHHHHH----HHHHcCcCEEEEc
Q 018519 221 EDARIAVQAGAAGIIVSNHGARQLDYVPAT---IMALEEVVKATQGRIPVFLDGGVRRGTDVF----KALALGASGIFIG 293 (354)
Q Consensus 221 ~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~---~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~----kalalGAd~V~ig 293 (354)
+.+..+++.|+|+|++.|+-|-. ...+. .+.+..+++.+++ -|+..|+..+ .+++ .|-.+|||++++-
T Consensus 23 ~lv~~li~~Gv~gl~v~GttGE~--~~Ls~~Er~~v~~~~~~~~~g--vi~Gvg~~~t-~~ai~la~~A~~~Gadavlv~ 97 (286)
T 2r91_A 23 NHVKNITSKGVDVVFVAGTTGLG--PALSLQEKMELTDAATSAARR--VIVQVASLNA-DEAIALAKYAESRGAEAVASL 97 (286)
T ss_dssp HHHHHHHHTTCCEEEETSTTTTG--GGSCHHHHHHHHHHHHHHCSS--EEEECCCSSH-HHHHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHCCCCEEEECccccCh--hhCCHHHHHHHHHHHHHHhCC--EEEeeCCCCH-HHHHHHHHHHHhcCCCEEEEc
Confidence 45566788999999996654421 11222 2344555555544 3445555444 4443 2334899999999
Q ss_pred HHHHHHHhhcCHHHHHHHHHHHHHH
Q 018519 294 RPVVYSLAAEGEKGVRRVLEMLREE 318 (354)
Q Consensus 294 r~~l~~~~~~G~~gv~~~l~~l~~e 318 (354)
.|+++. .-.++++.++++.+.+.
T Consensus 98 ~P~y~~--~~s~~~l~~~f~~va~a 120 (286)
T 2r91_A 98 PPYYFP--RLSERQIAKYFRDLCSA 120 (286)
T ss_dssp CSCSST--TCCHHHHHHHHHHHHHH
T ss_pred CCcCCC--CCCHHHHHHHHHHHHHh
Confidence 998764 01456766666655543
No 317
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=90.63 E-value=1.1 Score=39.42 Aligned_cols=68 Identities=9% Similarity=-0.048 Sum_probs=49.1
Q ss_pred CHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEE
Q 018519 219 TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGI 290 (354)
Q Consensus 219 ~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V 290 (354)
+.+.+..+.++|+|.|.++..-.... .+....+.+..+++..+ +++|+. ++++..++.++..+|||.|
T Consensus 90 ~~~~i~~~~~~Gad~V~l~~~~~~~~-~~~~~~~~i~~i~~~~~-~~~v~~--~~~t~~ea~~a~~~Gad~i 157 (234)
T 1yxy_A 90 TMTEVDQLAALNIAVIAMDCTKRDRH-DGLDIASFIRQVKEKYP-NQLLMA--DISTFDEGLVAHQAGIDFV 157 (234)
T ss_dssp SHHHHHHHHTTTCSEEEEECCSSCCT-TCCCHHHHHHHHHHHCT-TCEEEE--ECSSHHHHHHHHHTTCSEE
T ss_pred hHHHHHHHHHcCCCEEEEcccccCCC-CCccHHHHHHHHHHhCC-CCeEEE--eCCCHHHHHHHHHcCCCEE
Confidence 56889999999999999854321111 12234567777777653 455555 6899999999999999999
No 318
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=90.59 E-value=1.6 Score=41.78 Aligned_cols=119 Identities=10% Similarity=0.063 Sum_probs=75.9
Q ss_pred ChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-CCcc
Q 018519 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI-DRSL 212 (354)
Q Consensus 134 d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 212 (354)
+++.+.+.++++.+.||+++-++++.+.. + . ....+.++.+... +..+
T Consensus 165 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~--~-~----------------------------~~e~v~avr~a~g~~~~l 213 (392)
T 1tzz_A 165 GLSMLRGEMRGYLDRGYNVVKMKIGGAPI--E-E----------------------------DRMRIEAVLEEIGKDAQL 213 (392)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECSSSCH--H-H----------------------------HHHHHHHHHHHHTTTCEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCH--H-H----------------------------HHHHHHHHHHhcCCCCeE
Confidence 67777778888888999999999875210 0 0 0011222222221 1122
Q ss_pred ccc--ccCCHHHHH----HHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcC
Q 018519 213 SWK--GVLTAEDAR----IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG 286 (354)
Q Consensus 213 ~w~--Gi~~~~~a~----~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalG 286 (354)
..+ +-.+.+++. .+.+.|++.|- |. ..+..++.+.++++.+ ++||++++.+.+..|+.+.+..|
T Consensus 214 ~vDan~~~~~~~a~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~~ 283 (392)
T 1tzz_A 214 AVDANGRFNLETGIAYAKMLRDYPLFWYE-------EV-GDPLDYALQAALAEFY--PGPMATGENLFSHQDARNLLRYG 283 (392)
T ss_dssp EEECTTCCCHHHHHHHHHHHTTSCCSEEE-------CC-SCTTCHHHHHHHTTTC--CSCEEECTTCCSHHHHHHHHHHS
T ss_pred EEECCCCCCHHHHHHHHHHHHHcCCCeec-------CC-CChhhHHHHHHHHhhC--CCCEEECCCCCCHHHHHHHHHcC
Confidence 222 224555554 44566777663 11 1234577787777766 79999999999999999999988
Q ss_pred -----cCEEEEc
Q 018519 287 -----ASGIFIG 293 (354)
Q Consensus 287 -----Ad~V~ig 293 (354)
+|.|++-
T Consensus 284 ~~~~~~d~v~ik 295 (392)
T 1tzz_A 284 GMRPDRDWLQFD 295 (392)
T ss_dssp CCCTTTCEECCC
T ss_pred CCccCCcEEEEC
Confidence 8999985
No 319
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=90.55 E-value=0.24 Score=44.18 Aligned_cols=70 Identities=16% Similarity=0.242 Sum_probs=52.0
Q ss_pred CCHHHHHHHHHhCCCEEEEecC---CcCCCCCCcChHHHHHHHH---HHhcCCccEEE-----cCCCCCH--------HH
Q 018519 218 LTAEDARIAVQAGAAGIIVSNH---GARQLDYVPATIMALEEVV---KATQGRIPVFL-----DGGVRRG--------TD 278 (354)
Q Consensus 218 ~~~~~a~~~~~~G~d~I~vs~~---gg~~~~~~~~~~~~l~~i~---~~~~~~i~vi~-----~GGi~~g--------~d 278 (354)
.+.++|..|.+.|||-|-+... ||. -|++..+..++ +.+ ++||.+ .|++... .|
T Consensus 9 ~s~~~a~~A~~~GAdRIELc~~L~~GGl-----TPS~g~i~~~~~~~~~~--~ipV~vMIRPR~GdF~Ys~~E~~~M~~D 81 (224)
T 2bdq_A 9 ENLTDLTRLDKAIISRVELCDNLAVGGT-----TPSYGVIKEANQYLHEK--GISVAVMIRPRGGNFVYNDLELRIMEED 81 (224)
T ss_dssp ETTTTGGGCCTTTCCEEEEEBCGGGTCB-----CCCHHHHHHHHHHHHHT--TCEEEEECCSSSSCSCCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCEEEEcCCcccCCc-----CCCHHHHHHHHHhhhhc--CCceEEEECCCCCCCcCCHHHHHHHHHH
Confidence 4678899999999999999653 432 45566677776 666 688766 4556554 37
Q ss_pred HHHHHHcCcCEEEEcH
Q 018519 279 VFKALALGASGIFIGR 294 (354)
Q Consensus 279 v~kalalGAd~V~igr 294 (354)
+..+..+|||+|.+|-
T Consensus 82 i~~~~~~GadGvV~G~ 97 (224)
T 2bdq_A 82 ILRAVELESDALVLGI 97 (224)
T ss_dssp HHHHHHTTCSEEEECC
T ss_pred HHHHHHcCCCEEEEee
Confidence 7778889999999994
No 320
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=90.47 E-value=0.42 Score=43.59 Aligned_cols=38 Identities=13% Similarity=0.157 Sum_probs=28.2
Q ss_pred HHHHHh-hhc-CCcccccccCCHHHHHHHHHhCCCEEEEe
Q 018519 200 LAAYVA-GQI-DRSLSWKGVLTAEDARIAVQAGAAGIIVS 237 (354)
Q Consensus 200 ~~~~~~-~~~-~~~~~w~Gi~~~~~a~~~~~~G~d~I~vs 237 (354)
+..+++ ... .|++.=.||.+++||..+++.|+|+|.|.
T Consensus 168 L~~i~~~~~~~vPVI~~GGI~tpsDAa~AmeLGAdgVlVg 207 (268)
T 2htm_A 168 LELFAREKASLPPVVVDAGLGLPSHAAEVMELGLDAVLVN 207 (268)
T ss_dssp HHHHHHTTTTSSCBEEESCCCSHHHHHHHHHTTCCEEEES
T ss_pred HHHHHHhcCCCCeEEEeCCCCCHHHHHHHHHcCCCEEEEC
Confidence 445555 333 45554348999999999999999999983
No 321
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=90.42 E-value=0.62 Score=42.92 Aligned_cols=69 Identities=26% Similarity=0.307 Sum_probs=51.3
Q ss_pred cCCHHHHHHHHHhCCCEEEEec--------CCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcC
Q 018519 217 VLTAEDARIAVQAGAAGIIVSN--------HGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGAS 288 (354)
Q Consensus 217 i~~~~~a~~~~~~G~d~I~vs~--------~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd 288 (354)
+...+.++.+.++|+++|.+.. .+|.. .....+.+.++++.. ++|+++..++.+..++-.++++|||
T Consensus 28 ~~~~~~a~~~~~~Ga~~i~~~e~v~~~~~~~~G~~---~~~~~~~i~~i~~~~--~~Pvi~~~~~~~~~~~~~~~~aGad 102 (297)
T 2zbt_A 28 VTTPEQAVIAEEAGAVAVMALERVPADIRAQGGVA---RMSDPKIIKEIMAAV--SIPVMAKVRIGHFVEAMILEAIGVD 102 (297)
T ss_dssp ESSHHHHHHHHHHTCSEEEECSSCHHHHHHTTCCC---CCCCHHHHHHHHTTC--SSCEEEEEETTCHHHHHHHHHTTCS
T ss_pred echHHHHHHHHHCCCcEEEeccccchHHHhhcCCc---cCCCHHHHHHHHHhc--CCCeEEEeccCCHHHHHHHHHCCCC
Confidence 3468999999999999998721 11211 123456677777655 7899998888888888888899999
Q ss_pred EE
Q 018519 289 GI 290 (354)
Q Consensus 289 ~V 290 (354)
+|
T Consensus 103 ~v 104 (297)
T 2zbt_A 103 FI 104 (297)
T ss_dssp EE
T ss_pred EE
Confidence 99
No 322
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=90.41 E-value=1.3 Score=40.85 Aligned_cols=157 Identities=13% Similarity=0.080 Sum_probs=78.1
Q ss_pred ccceEecccccccccCChhhHHHHHHHHHcCCc-E-EecCCC---------CCCHH---HHH----hhCCCceEEEEeec
Q 018519 71 SMPIMIAPTAMQKMAHPEGEYATARAASAAGTI-M-TLSSWS---------TSSVE---EVA----STGPGIRFFQLYVY 132 (354)
Q Consensus 71 ~~Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~-~-~~s~~~---------~~~~e---ei~----~~~~~~~~~QLy~~ 132 (354)
..|+++.-++. .++.-...++.+.++|.. + .++-.+ ..+.| ++. +...-|.++.+...
T Consensus 93 ~~p~~~~i~g~----~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~Pv~vKi~~~ 168 (311)
T 1jub_A 93 EGPIFFSIAGM----SAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLGVKLPPY 168 (311)
T ss_dssp SSCCEEEECCS----SHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCC
T ss_pred CCCEEEEcCCC----CHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcCCCEEEEECCC
Confidence 45766654421 222234777777888865 3 332110 01232 222 22234678888765
Q ss_pred CChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhh-hccCCCCcCccccccCCccCcCcccchhhHHHHHhhh--cC
Q 018519 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIK-NRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQ--ID 209 (354)
Q Consensus 133 ~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 209 (354)
.+.+...+.++.++++|+++|.++- ....|... +.+ ....++.. ....++............+.++.+.. ..
T Consensus 169 ~~~~~~~~~a~~~~~~G~d~i~v~~-~~~~g~~i-~~~~~~~~~~~~---~~~gG~sg~~~~~~~~~~i~~v~~~~~~~i 243 (311)
T 1jub_A 169 FDLVHFDIMAEILNQFPLTYVNSVN-SIGNGLFI-DPEAESVVIKPK---DGFGGIGGAYIKPTALANVRAFYTRLKPEI 243 (311)
T ss_dssp CSHHHHHHHHHHHTTSCCCEEEECC-CEEEEECE-ETTTTEESCSGG---GGEEEEESGGGHHHHHHHHHHHHTTSCTTS
T ss_pred CCHHHHHHHHHHHHHcCCcEEEecC-CCCcCcee-ccCCCCcccccC---CCCCccccccccHHHHHHHHHHHHhcCCCC
Confidence 5666777888999999999998752 11000000 000 00000000 00000000000000011233444433 33
Q ss_pred CcccccccCCHHHHHHHHHhCCCEEEE
Q 018519 210 RSLSWKGVLTAEDARIAVQAGAAGIIV 236 (354)
Q Consensus 210 ~~~~w~Gi~~~~~a~~~~~~G~d~I~v 236 (354)
|.+.-.||.+.+|+.+++.+|||+|.+
T Consensus 244 pvi~~GGI~~~~da~~~l~~GAd~V~v 270 (311)
T 1jub_A 244 QIIGTGGIETGQDAFEHLLCGATMLQI 270 (311)
T ss_dssp EEEEESSCCSHHHHHHHHHHTCSEEEE
T ss_pred CEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 444445899999999999999999998
No 323
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=89.72 E-value=1.8 Score=41.73 Aligned_cols=133 Identities=19% Similarity=0.174 Sum_probs=81.0
Q ss_pred CChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-CCc
Q 018519 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI-DRS 211 (354)
Q Consensus 133 ~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 211 (354)
.+++.+.+.++++.+.||+++-+.++++..+.. +. .+. ...+ ......+.++.+... +..
T Consensus 150 ~~~e~~~~~a~~~~~~G~~~~KlK~g~~~~~~~------g~-~~~---~~~~---------~~d~~~v~avR~a~G~d~~ 210 (404)
T 4e5t_A 150 NDADMAAEAAAKAVDQGFTAVKFDPAGAYTIYD------GH-QPS---LEDL---------ERSEAFCKQIRAAVGTKAD 210 (404)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEECCSCCCBTTC------SB-CCC---HHHH---------HHHHHHHHHHHHHHGGGSE
T ss_pred CCHHHHHHHHHHHHHcCCCEEeeCCCCCCcccc------cc-ccc---HHHH---------HHHHHHHHHHHHHcCCCCe
Confidence 366777777788888899999998876532100 00 000 0000 001112333333321 222
Q ss_pred cccc--ccCCHHHHH----HHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHc
Q 018519 212 LSWK--GVLTAEDAR----IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL 285 (354)
Q Consensus 212 ~~w~--Gi~~~~~a~----~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalal 285 (354)
+..+ +-.+.++|. .+.+.|++.|- |. ..+..++.+.++++.+ ++||++++.+.+..|+.+++..
T Consensus 211 l~vDan~~~~~~~A~~~~~~l~~~~i~~iE-------eP-~~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~ 280 (404)
T 4e5t_A 211 LLFGTHGQFTVSGAKRLARRLEAYDPLWFE-------EP-IPPEKPEDMAEVARYT--SIPVATGERLCTKYEFSRVLET 280 (404)
T ss_dssp EEECCCSCBCHHHHHHHHHHHGGGCCSEEE-------CC-SCTTCHHHHHHHHHHC--SSCEEECTTCCHHHHHHHHHHH
T ss_pred EEEeCCCCcCHHHHHHHHHHHhhcCCcEEE-------CC-CCcccHHHHHHHHhhC--CCCEEeCCCcCCHHHHHHHHHh
Confidence 3223 334666654 45567888874 11 1233577888888877 8999999999999999999998
Q ss_pred C-cCEEEEcH
Q 018519 286 G-ASGIFIGR 294 (354)
Q Consensus 286 G-Ad~V~igr 294 (354)
| +|.|++--
T Consensus 281 ~a~d~v~~d~ 290 (404)
T 4e5t_A 281 GAASILQMNL 290 (404)
T ss_dssp TCCSEECCCT
T ss_pred CCCCEEecCc
Confidence 7 78888753
No 324
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=89.68 E-value=4.3 Score=36.72 Aligned_cols=127 Identities=13% Similarity=0.153 Sum_probs=76.0
Q ss_pred eecCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcC
Q 018519 130 YVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQID 209 (354)
Q Consensus 130 y~~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (354)
|...+.+.+.+-++.+.++|++.+++-+=.+- + .+ ....++++++....
T Consensus 67 Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~d----------------g----~i-----------D~~~~~~Li~~a~~ 115 (256)
T 1twd_A 67 YSDGEFAAILEDVRTVRELGFPGLVTGVLDVD----------------G----NV-----------DMPRMEKIMAAAGP 115 (256)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCSEEEECCBCTT----------------S----SB-----------CHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHcCCCEEEEeeECCC----------------C----Cc-----------CHHHHHHHHHHhCC
Confidence 54445667888889999999999988543221 1 00 11123444433222
Q ss_pred Cccc----ccccCCHHHH-HHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHH
Q 018519 210 RSLS----WKGVLTAEDA-RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA 284 (354)
Q Consensus 210 ~~~~----w~Gi~~~~~a-~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kala 284 (354)
-+++ +|-+.++..| +.+.+.|++.|--|| +. ......++.|.++.+..+ ++.|++-|||+. ..+.+-+.
T Consensus 116 ~~vTFHRAfD~~~d~~~ale~L~~lG~~rILTSG--~~--~~a~~g~~~L~~Lv~~a~-~i~Im~GgGv~~-~Ni~~l~~ 189 (256)
T 1twd_A 116 LAVTFHRAFDMCANPLYTLNNLAELGIARVLTSG--QK--SDALQGLSKIMELIAHRD-APIIMAGAGVRA-ENLHHFLD 189 (256)
T ss_dssp SEEEECGGGGGCSCHHHHHHHHHHHTCCEEEECT--TS--SSTTTTHHHHHHHHTSSS-CCEEEEESSCCT-TTHHHHHH
T ss_pred CcEEEECchhccCCHHHHHHHHHHcCCCEEECCC--CC--CCHHHHHHHHHHHHHhhC-CcEEEecCCcCH-HHHHHHHH
Confidence 2222 2234455554 578899999998644 32 123444566666665544 888999999964 33444447
Q ss_pred cCcCEEEEc
Q 018519 285 LGASGIFIG 293 (354)
Q Consensus 285 lGAd~V~ig 293 (354)
+|++.+=.+
T Consensus 190 tGv~e~H~S 198 (256)
T 1twd_A 190 AGVLEVHSS 198 (256)
T ss_dssp HTCSEEEEC
T ss_pred cCCCeEeEC
Confidence 899888754
No 325
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=89.60 E-value=1.6 Score=40.81 Aligned_cols=104 Identities=12% Similarity=0.031 Sum_probs=56.7
Q ss_pred CceEEEEeecCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHH
Q 018519 123 GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAA 202 (354)
Q Consensus 123 ~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (354)
-|.++.+-...+.+.+.+.++.++++|+++|.++-.... +. +.+. .+......-+.+.. ........+.+
T Consensus 212 ~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~---~~-~~~~---~~~~~~~gg~~g~~---~~~~~~~~i~~ 281 (336)
T 1f76_A 212 VPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLD---RS-LVQG---MKNCDQTGGLSGRP---LQLKSTEIIRR 281 (336)
T ss_dssp CCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCCBCC---CT-TSTT---STTTTCSSEEEEGG---GHHHHHHHHHH
T ss_pred CceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCccc---cc-cccc---ccccccCCCcCCch---hHHHHHHHHHH
Confidence 467777644345556778889999999999998632211 11 0000 00000000000000 00000111333
Q ss_pred HHhhh--cCCcccccccCCHHHHHHHHHhCCCEEEE
Q 018519 203 YVAGQ--IDRSLSWKGVLTAEDARIAVQAGAAGIIV 236 (354)
Q Consensus 203 ~~~~~--~~~~~~w~Gi~~~~~a~~~~~~G~d~I~v 236 (354)
+.+.+ ..|.+.-.||.+.+++.+++++|||+|.+
T Consensus 282 i~~~~~~~ipVi~~GGI~~~~da~~~l~~GAd~V~i 317 (336)
T 1f76_A 282 LSLELNGRLPIIGVGGIDSVIAAREKIAAGASLVQI 317 (336)
T ss_dssp HHHHHTTSSCEEEESSCCSHHHHHHHHHHTCSEEEE
T ss_pred HHHHhCCCCCEEEECCCCCHHHHHHHHHCCCCEEEe
Confidence 44433 34555555899999999999999999988
No 326
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=89.39 E-value=5.2 Score=38.41 Aligned_cols=140 Identities=15% Similarity=0.104 Sum_probs=77.8
Q ss_pred cCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhh----ccCCCCcCcc---ccccCCccCcCcccchhhHHHHH
Q 018519 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKN----RFTLPPFLTL---KNFQGLDLGKMDEANDSGLAAYV 204 (354)
Q Consensus 132 ~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~----~~~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 204 (354)
+.|.+...++++.|.++|++++-.-.=.| +.+-+ .|..+.+.+. ..++.+. ........+.+..
T Consensus 40 ~Gsle~A~~li~~Ak~aGAdavKfQ~~k~------~tl~s~~~~~fq~~~~~~~~~ye~~~~~~---l~~e~~~~L~~~~ 110 (385)
T 1vli_A 40 DGKLDQAFALIDAAAEAGADAVKFQMFQA------DRMYQKDPGLYKTAAGKDVSIFSLVQSME---MPAEWILPLLDYC 110 (385)
T ss_dssp TTCHHHHHHHHHHHHHHTCSEEEECCBCG------GGGTSCCC---------CCCHHHHGGGBS---SCGGGHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhCCCEEeeeeecc------CcccCcchhhhccCCCCCccHHHHHHhcC---CCHHHHHHHHHHH
Confidence 35778888999999999999986532111 11000 0110100000 0011000 0011222344444
Q ss_pred hhhcCCcccccccCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHH
Q 018519 205 AGQIDRSLSWKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA 284 (354)
Q Consensus 205 ~~~~~~~~~w~Gi~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kala 284 (354)
+....+.+ .-+++.+.+..+.+.|+|.+.|.. + ....+..|.++.+ ...|||.+-|+.|-+++..|+.
T Consensus 111 ~~~Gi~~~--stpfD~~svd~l~~~~vd~~KIgS---~----~~~N~pLL~~va~---~gKPViLStGmaTl~Ei~~Ave 178 (385)
T 1vli_A 111 REKQVIFL--STVCDEGSADLLQSTSPSAFKIAS---Y----EINHLPLLKYVAR---LNRPMIFSTAGAEISDVHEAWR 178 (385)
T ss_dssp HHTTCEEE--CBCCSHHHHHHHHTTCCSCEEECG---G----GTTCHHHHHHHHT---TCSCEEEECTTCCHHHHHHHHH
T ss_pred HHcCCcEE--EccCCHHHHHHHHhcCCCEEEECc---c----cccCHHHHHHHHh---cCCeEEEECCCCCHHHHHHHHH
Confidence 44322211 246788999999999999999921 1 2334566766654 2789999999999999887764
Q ss_pred ----cCcCEEEE
Q 018519 285 ----LGASGIFI 292 (354)
Q Consensus 285 ----lGAd~V~i 292 (354)
.|.+-|.+
T Consensus 179 ~i~~~Gn~~iiL 190 (385)
T 1vli_A 179 TIRAEGNNQIAI 190 (385)
T ss_dssp HHHTTTCCCEEE
T ss_pred HHHHCCCCcEEE
Confidence 46633333
No 327
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=89.30 E-value=4.4 Score=39.43 Aligned_cols=119 Identities=17% Similarity=0.115 Sum_probs=76.4
Q ss_pred ChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-CCcc
Q 018519 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI-DRSL 212 (354)
Q Consensus 134 d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 212 (354)
+++.+.+.++++.+.||+++-|+++... + .+ ...+..+.+... +..+
T Consensus 198 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~---~-~d----------------------------~e~v~avR~a~G~d~~l 245 (441)
T 2hxt_A 198 SDEKLVRLAKEAVADGFRTIKLKVGANV---Q-DD----------------------------IRRCRLARAAIGPDIAM 245 (441)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCH---H-HH----------------------------HHHHHHHHHHHCSSSEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCH---H-HH----------------------------HHHHHHHHHhcCCCCeE
Confidence 6777888888888999999999876421 0 00 011222222221 1222
Q ss_pred ccc--ccCCHHHHHHH----HHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcC
Q 018519 213 SWK--GVLTAEDARIA----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG 286 (354)
Q Consensus 213 ~w~--Gi~~~~~a~~~----~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalG 286 (354)
..+ +-.+.++|.+. .+.|++.|- |. ..+..++.+.++++.+. .+||++++.+.+..|+.+.+..|
T Consensus 246 ~vDan~~~~~~~a~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~~-~iPIa~dE~~~~~~~~~~~i~~~ 316 (441)
T 2hxt_A 246 AVDANQRWDVGPAIDWMRQLAEFDIAWIE-------EP-TSPDDVLGHAAIRQGIT-PVPVSTGEHTQNRVVFKQLLQAG 316 (441)
T ss_dssp EEECTTCCCHHHHHHHHHTTGGGCCSCEE-------CC-SCTTCHHHHHHHHHHHT-TSCEEECTTCCSHHHHHHHHHHT
T ss_pred EEECCCCCCHHHHHHHHHHHHhcCCCeee-------CC-CCHHHHHHHHHHHhhCC-CCCEEEeCCcCCHHHHHHHHHcC
Confidence 222 33466666544 456777653 11 12335777888887763 59999999999999999999987
Q ss_pred -cCEEEEc
Q 018519 287 -ASGIFIG 293 (354)
Q Consensus 287 -Ad~V~ig 293 (354)
+|.|++-
T Consensus 317 ~~d~v~ik 324 (441)
T 2hxt_A 317 AVDLIQID 324 (441)
T ss_dssp CCSEECCC
T ss_pred CCCEEEeC
Confidence 7999884
No 328
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=89.30 E-value=1.4 Score=40.67 Aligned_cols=184 Identities=21% Similarity=0.138 Sum_probs=99.4
Q ss_pred hHHHHHHHHHcCCcEEecCC---C---------CCCHHHHHh-------hCCCceEEEE-eecCChHHHHHHHHHHHHcC
Q 018519 90 EYATARAASAAGTIMTLSSW---S---------TSSVEEVAS-------TGPGIRFFQL-YVYKDRNVVAQLVRRAERAG 149 (354)
Q Consensus 90 e~~la~aa~~~G~~~~~s~~---~---------~~~~eei~~-------~~~~~~~~QL-y~~~d~~~~~~~~~~a~~~G 149 (354)
|...|+.+.++|...++.+. + ..+++|+.. ..+.|...=+ +.+.++....+.+++.+++|
T Consensus 24 D~~sA~~~~~aG~~ai~vs~~~~a~~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~~~~~v~~l~~aG 103 (290)
T 2hjp_A 24 NPLVAKLAEQAGFGGIWGSGFELSASYAVPDANILSMSTHLEMMRAIASTVSIPLIADIDTGFGNAVNVHYVVPQYEAAG 103 (290)
T ss_dssp SHHHHHHHHHHTCSEEEECHHHHHHHTTSCTTTCSCHHHHHHHHHHHHTTCSSCEEEECTTTTSSHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHcCCCEEEEChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCHHHHHHHHHHHHHhC
Confidence 45899999999987665331 1 135555532 2233322211 11236777788889999999
Q ss_pred CCEEEEecCCCCCCchhHHhhhccCCCCcCcccccc--CCccCcCcccchhhHHHHHhhhcCCccccc----------cc
Q 018519 150 FKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQ--GLDLGKMDEANDSGLAAYVAGQIDRSLSWK----------GV 217 (354)
Q Consensus 150 ~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~----------Gi 217 (354)
+.++-|- |... |+..+ .+. +-... +.......++..+.....+.+... |+
T Consensus 104 a~gv~iE-D~~~--------------~k~cg--H~~~~~k~l~-p~~e~~~kI~Aa~~a~~~~~~~i~aRtda~~a~~g~ 165 (290)
T 2hjp_A 104 ASAIVME-DKTF--------------PKDTS--LRTDGRQELV-RIEEFQGKIAAATAARADRDFVVIARVEALIAGLGQ 165 (290)
T ss_dssp CSEEEEE-CBCS--------------SCCC---------CCBC-CHHHHHHHHHHHHHHCSSTTSEEEEEECTTTTTCCH
T ss_pred CeEEEEc-CCCC--------------Ccccc--ccccCCCccc-CHHHHHHHHHHHHHhcccCCcEEEEeehHhhccccH
Confidence 9998775 2211 11000 000 00000 000011223433333222222111 21
Q ss_pred -CCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcC-cCEEEEcHH
Q 018519 218 -LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRP 295 (354)
Q Consensus 218 -~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalG-Ad~V~igr~ 295 (354)
-..++|+...++|||.|++ +++ +++.+.+.++.+.+..++|++++-.-....++.+.-++| .+.|..|..
T Consensus 166 ~~ai~Ra~ay~eAGAd~i~~--e~~------~~~~~~~~~i~~~~~~~vP~i~n~~~~~~~~~~eL~~lG~v~~v~~~~~ 237 (290)
T 2hjp_A 166 QEAVRRGQAYEEAGADAILI--HSR------QKTPDEILAFVKSWPGKVPLVLVPTAYPQLTEADIAALSKVGIVIYGNH 237 (290)
T ss_dssp HHHHHHHHHHHHTTCSEEEE--CCC------CSSSHHHHHHHHHCCCSSCEEECGGGCTTSCHHHHHTCTTEEEEEECSH
T ss_pred HHHHHHHHHHHHcCCcEEEe--CCC------CCCHHHHHHHHHHcCCCCCEEEeccCCCCCCHHHHHhcCCeeEEEechH
Confidence 2456777889999999999 432 455577788888885559999752100122343444599 999999987
Q ss_pred HHHH
Q 018519 296 VVYS 299 (354)
Q Consensus 296 ~l~~ 299 (354)
.+.+
T Consensus 238 ~~ra 241 (290)
T 2hjp_A 238 AIRA 241 (290)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
No 329
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=89.27 E-value=2.2 Score=40.74 Aligned_cols=120 Identities=9% Similarity=-0.002 Sum_probs=75.2
Q ss_pred CCh---HHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-
Q 018519 133 KDR---NVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI- 208 (354)
Q Consensus 133 ~d~---~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 208 (354)
.++ +.+.+.++++.+.||+++-++++.+-. + . ....+.++.+...
T Consensus 135 ~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~--~-~----------------------------d~e~v~avR~a~G~ 183 (382)
T 2gdq_A 135 DSPQWISRSVSNVEAQLKKGFEQIKVKIGGTSF--K-E----------------------------DVRHINALQHTAGS 183 (382)
T ss_dssp SSTTHHHHHHHHHHHHHTTTCCEEEEECSSSCH--H-H----------------------------HHHHHHHHHHHHCT
T ss_pred CCcccHHHHHHHHHHHHHcCCCEEEEcCCCCCH--H-H----------------------------HHHHHHHHHHhhCC
Confidence 466 777788888888999999998764210 0 0 0011222222221
Q ss_pred CCccccc--ccCCHHHHH----HHHHh-CCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHH
Q 018519 209 DRSLSWK--GVLTAEDAR----IAVQA-GAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK 281 (354)
Q Consensus 209 ~~~~~w~--Gi~~~~~a~----~~~~~-G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~k 281 (354)
+..+..+ +-.+.+++. .+.+. |++.|- |. ..+..++.+.++++.+ ++||++++.+.+..|+.+
T Consensus 184 d~~l~vDan~~~~~~~a~~~~~~l~~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~ 253 (382)
T 2gdq_A 184 SITMILDANQSYDAAAAFKWERYFSEWTNIGWLE-------EP-LPFDQPQDYAMLRSRL--SVPVAGGENMKGPAQYVP 253 (382)
T ss_dssp TSEEEEECTTCCCHHHHHTTHHHHTTCSCEEEEE-------CC-SCSSCHHHHHHHHTTC--SSCEEECTTCCSHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHhhccCCeEEE-------CC-CCcccHHHHHHHHhhC--CCCEEecCCcCCHHHHHH
Confidence 1222222 334666664 33444 555542 11 1234577888888766 799999999999999999
Q ss_pred HHHcC-cCEEEEc
Q 018519 282 ALALG-ASGIFIG 293 (354)
Q Consensus 282 alalG-Ad~V~ig 293 (354)
.+..| +|.|++-
T Consensus 254 ~i~~~~~d~v~ik 266 (382)
T 2gdq_A 254 LLSQRCLDIIQPD 266 (382)
T ss_dssp HHHTTCCSEECCC
T ss_pred HHHcCCCCEEecC
Confidence 99987 8999883
No 330
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=89.04 E-value=4.3 Score=45.40 Aligned_cols=118 Identities=14% Similarity=0.117 Sum_probs=86.4
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHh-----cCCcc-EEEcCCCCCHHHHHHHHHcCcCEEEEcH
Q 018519 221 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAT-----QGRIP-VFLDGGVRRGTDVFKALALGASGIFIGR 294 (354)
Q Consensus 221 ~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~-----~~~i~-vi~~GGi~~g~dv~kalalGAd~V~igr 294 (354)
++|..|++.|+..|++|-.+-..-....|++-++..+..++ +.++. |+=+|.+|+.-+++-.+-.||++|.
T Consensus 591 ~~a~~av~~g~~iliLsDr~~~~~~~~ip~lla~~avh~~L~~~~~R~~~~lvvesg~~r~~Hh~a~l~GyGA~av~--- 667 (1479)
T 1ea0_A 591 QETEDAVRGGATHVILTDEAMGPARAAIPAILATGAVHTHLIRSNLRTFTSLNVRTAEGLDTHYFAVLIGVGATTVN--- 667 (1479)
T ss_dssp HHHHHHHHHTCCEEEEECTTCBTTEEECCHHHHHHHHHHHHHTTTCGGGCEEEEECSSCCSHHHHHHHHTTTCSEEE---
T ss_pred HHHHHHHHCCCcEEEECCCCCCCCccCcCHHHHHHHHHHHHHhcCccccceEEEEeCCchhHHHHHHHHhcCccccC---
Confidence 46678889999999999875321112466666666666654 22454 5556888999999888889999995
Q ss_pred HHH-----HHHhhcC-------HHHHHHHHHHHHHHHHHHHHHhCCCChhhhcccceee
Q 018519 295 PVV-----YSLAAEG-------EKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVT 341 (354)
Q Consensus 295 ~~l-----~~~~~~G-------~~gv~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l~~ 341 (354)
|+| ..+...| ++.+.+|.+.+.+.|...|..+|.+++..-++.-+..
T Consensus 668 Pyla~e~~~~~~~~~~~~~~~~~~~~~ny~~a~~~Gl~KimskmGIst~~sY~gaqiFe 726 (1479)
T 1ea0_A 668 AYLAQEAIAERHRRGLFGSMPLEKGMANYKKAIDDGLLKIMSKMGISVISSYRGGGNFE 726 (1479)
T ss_dssp CHHHHHHHHHHHTTTTTTTCCHHHHHHHHHHHHHHHHHHHHHTTTCCCHHHHTTSCCEE
T ss_pred HHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhccHhhhhhcCCceeee
Confidence 443 2232223 3578899999999999999999999999988776553
No 331
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=89.04 E-value=0.81 Score=43.78 Aligned_cols=73 Identities=16% Similarity=0.104 Sum_probs=50.9
Q ss_pred CCHHHHHHHH-HhCCCEEEEecCCcC--CCCCCcC---hH-HHHHHHHHHhcCCccEEEcCCC---CCHHHHHHHHHcCc
Q 018519 218 LTAEDARIAV-QAGAAGIIVSNHGAR--QLDYVPA---TI-MALEEVVKATQGRIPVFLDGGV---RRGTDVFKALALGA 287 (354)
Q Consensus 218 ~~~~~a~~~~-~~G~d~I~vs~~gg~--~~~~~~~---~~-~~l~~i~~~~~~~i~vi~~GGi---~~g~dv~kalalGA 287 (354)
...+++.++. .+|+|++.+.-.... ....+.+ .| +.|.++++.+ ++||++-+ + .+.+++.++..+||
T Consensus 155 ~~~e~~~~~ve~~~adal~ihln~~qe~~~p~Gd~~~~~~~~~I~~l~~~~--~~PVivK~-vg~g~s~e~A~~l~~aGa 231 (365)
T 3sr7_A 155 KPYQAGLQAVRDLQPLFLQVHINLMQELLMPEGEREFRSWKKHLSDYAKKL--QLPFILKE-VGFGMDVKTIQTAIDLGV 231 (365)
T ss_dssp SCHHHHHHHHHHHCCSCEEEEECHHHHHTSSSSCCCCHHHHHHHHHHHHHC--CSCEEEEE-CSSCCCHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHhcCCCEEEEeccccccccCCCCCCcHHHHHHHHHHHHHhh--CCCEEEEE-CCCCCCHHHHHHHHHcCC
Confidence 3566666555 889999998532211 0111222 33 5677888776 79999985 7 78999999999999
Q ss_pred CEEEEc
Q 018519 288 SGIFIG 293 (354)
Q Consensus 288 d~V~ig 293 (354)
|+|.++
T Consensus 232 d~I~V~ 237 (365)
T 3sr7_A 232 KTVDIS 237 (365)
T ss_dssp CEEECC
T ss_pred CEEEEe
Confidence 999884
No 332
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=89.04 E-value=1.6 Score=42.51 Aligned_cols=119 Identities=15% Similarity=0.108 Sum_probs=76.3
Q ss_pred CCh-HHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-CC
Q 018519 133 KDR-NVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI-DR 210 (354)
Q Consensus 133 ~d~-~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 210 (354)
.++ +.+.+.++++.+.||+++-++++... +. + ...+.++.+... +.
T Consensus 183 ~~~~e~~~~~a~~~~~~Gf~~vKik~g~~~---~~-d----------------------------~e~v~avR~avG~d~ 230 (428)
T 3bjs_A 183 YQPKESLAEEAQEYIARGYKALKLRIGDAA---RV-D----------------------------IERVRHVRKVLGDEV 230 (428)
T ss_dssp SCCHHHHHHHHHHHHHHTCSEEEEECCSCH---HH-H----------------------------HHHHHHHHHHHCTTS
T ss_pred CChHHHHHHHHHHHHHCCCCEEEECCCCCH---HH-H----------------------------HHHHHHHHHhcCCCC
Confidence 467 77778888888899999999876411 00 0 011222222221 11
Q ss_pred cc--cccccCCHHHH----HHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCC-ccEEEcCCCCCHHHHHHHH
Q 018519 211 SL--SWKGVLTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGR-IPVFLDGGVRRGTDVFKAL 283 (354)
Q Consensus 211 ~~--~w~Gi~~~~~a----~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~-i~vi~~GGi~~g~dv~kal 283 (354)
.+ ...+-.+.+++ +.+.+.|++.|- |. ..+..++.+.++++.+ + +||++++.+.+..|+.+++
T Consensus 231 ~l~vDan~~~~~~eai~~~~~L~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~~iPIa~dE~~~~~~~~~~~i 300 (428)
T 3bjs_A 231 DILTDANTAYTMADARRVLPVLAEIQAGWLE-------EP-FACNDFASYREVAKIT--PLVPIAAGENHYTRFEFGQML 300 (428)
T ss_dssp EEEEECTTCCCHHHHHHHHHHHHHTTCSCEE-------CC-SCTTCHHHHHHHTTTC--SSSCEEECTTCCSHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhcCCCEEE-------CC-CCccCHHHHHHHHHhC--CCCcEEcCCCcCCHHHHHHHH
Confidence 22 22233455655 456678888764 11 1233577777777665 6 9999999999999999999
Q ss_pred HcC-cCEEEEc
Q 018519 284 ALG-ASGIFIG 293 (354)
Q Consensus 284 alG-Ad~V~ig 293 (354)
..| +|.|++-
T Consensus 301 ~~~~~d~v~ik 311 (428)
T 3bjs_A 301 DAGAVQVWQPD 311 (428)
T ss_dssp TTCCEEEECCB
T ss_pred HhCCCCEEEeC
Confidence 987 7888873
No 333
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=89.02 E-value=3.7 Score=38.89 Aligned_cols=118 Identities=20% Similarity=0.188 Sum_probs=74.2
Q ss_pred CChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-CCc
Q 018519 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI-DRS 211 (354)
Q Consensus 133 ~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 211 (354)
.+++.+.+.++++.+.||+++-++++.+. + .++ ..+.++.+... +..
T Consensus 145 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~~---~-~~~----------------------------e~v~avr~a~g~~~~ 192 (371)
T 2ps2_A 145 GEPEDMRARVAKYRAKGYKGQSVKISGEP---V-TDA----------------------------KRITAALANQQPDEF 192 (371)
T ss_dssp CCHHHHHHHHHHHHTTTCCEEEEECCSCH---H-HHH----------------------------HHHHHHTTTCCTTCE
T ss_pred CCHHHHHHHHHHHHHhChheEEeecCCCH---H-HHH----------------------------HHHHHHHHhcCCCCE
Confidence 57888888888888999999999886421 0 000 01111111111 111
Q ss_pred cccc--ccCCHHHHH----HH-HHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHH
Q 018519 212 LSWK--GVLTAEDAR----IA-VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA 284 (354)
Q Consensus 212 ~~w~--Gi~~~~~a~----~~-~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kala 284 (354)
+..+ +-.+.+++. .+ .+.|+ .|- |. .+.++.+.++++.+ ++||++++.+.+..|+.+++.
T Consensus 193 l~vDan~~~~~~~a~~~~~~l~~~~~i-~iE-------~P---~~~~~~~~~l~~~~--~iPI~~dE~~~~~~~~~~~i~ 259 (371)
T 2ps2_A 193 FIVDANGKLSVETALRLLRLLPHGLDF-ALE-------AP---CATWRECISLRRKT--DIPIIYDELATNEMSIVKILA 259 (371)
T ss_dssp EEEECTTBCCHHHHHHHHHHSCTTCCC-EEE-------CC---BSSHHHHHHHHTTC--CSCEEESTTCCSHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHHHHhhcCC-cCc-------CC---cCCHHHHHHHHhhC--CCCEEeCCCcCCHHHHHHHHH
Confidence 2112 224556654 33 44465 442 11 11677788887766 799999999999999999999
Q ss_pred cC-cCEEEEcHH
Q 018519 285 LG-ASGIFIGRP 295 (354)
Q Consensus 285 lG-Ad~V~igr~ 295 (354)
.| +|.|++--.
T Consensus 260 ~~~~d~v~ik~~ 271 (371)
T 2ps2_A 260 DDAAEGIDLKIS 271 (371)
T ss_dssp HTCCSEEEEEHH
T ss_pred hCCCCEEEechh
Confidence 87 899999653
No 334
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=88.92 E-value=4.3 Score=39.13 Aligned_cols=130 Identities=14% Similarity=0.062 Sum_probs=79.4
Q ss_pred cCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-CC
Q 018519 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI-DR 210 (354)
Q Consensus 132 ~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 210 (354)
..+++.+.+.++++.+.||+++-+ ++++..+.. . ....+. .....++++.+.+. +.
T Consensus 123 ~~~~e~~~~~a~~~~~~G~~~iKl-~G~~~~~~~----------~---~~~~~~---------~d~e~v~avR~avG~d~ 179 (405)
T 3rr1_A 123 GDRPADVIAGMKALQAGGFDHFKL-NGCEEMGII----------D---TSRAVD---------AAVARVAEIRSAFGNTV 179 (405)
T ss_dssp CSSHHHHHHHHHHHHHTTCCEEEE-ESCCSSSCB----------C---SHHHHH---------HHHHHHHHHHHTTGGGS
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEE-ecCCccccc----------c---cchhHH---------HHHHHHHHHHHHhCCCc
Confidence 357788888888888899999998 776531100 0 000000 01112333333321 12
Q ss_pred ccccc--ccCCHHHHH----HHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHH
Q 018519 211 SLSWK--GVLTAEDAR----IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA 284 (354)
Q Consensus 211 ~~~w~--Gi~~~~~a~----~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kala 284 (354)
.+..+ +-.+.++|. .+.+.|++.|- |. ..+..++.+.++++.+ ++||++++.+.+..|+.+++.
T Consensus 180 ~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iE-------eP-~~~~d~~~~~~l~~~~--~iPIa~dE~i~~~~~~~~~l~ 249 (405)
T 3rr1_A 180 EFGLDFHGRVSAPMAKVLIKELEPYRPLFIE-------EP-VLAEQAETYARLAAHT--HLPIAAGERMFSRFDFKRVLE 249 (405)
T ss_dssp EEEEECCSCBCHHHHHHHHHHHGGGCCSCEE-------CS-SCCSSTHHHHHHHTTC--SSCEEECTTCCSHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHHHHhcCCCEEE-------CC-CCcccHHHHHHHHhcC--CCCEEecCCcCCHHHHHHHHH
Confidence 23223 334666664 45567887774 11 1223567777887765 799999999999999999999
Q ss_pred cC-cCEEEEcH
Q 018519 285 LG-ASGIFIGR 294 (354)
Q Consensus 285 lG-Ad~V~igr 294 (354)
.| +|.|++--
T Consensus 250 ~~a~d~v~~d~ 260 (405)
T 3rr1_A 250 AGGVSILQPDL 260 (405)
T ss_dssp HCCCSEECCBT
T ss_pred HhCCCeEEECh
Confidence 86 89998853
No 335
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=88.79 E-value=3.7 Score=39.47 Aligned_cols=140 Identities=16% Similarity=0.095 Sum_probs=78.1
Q ss_pred ChHHHHHHHHHHHHcCCCEEEEecCC-CCCCchhHHhhhccCCCCcCccccccCCcc-CcCcccchhhHHHHHhhhc-CC
Q 018519 134 DRNVVAQLVRRAERAGFKAIALTVDT-PRLGRREADIKNRFTLPPFLTLKNFQGLDL-GKMDEANDSGLAAYVAGQI-DR 210 (354)
Q Consensus 134 d~~~~~~~~~~a~~~G~~ai~i~vd~-p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~ 210 (354)
+++.+.+.++++.+.||+++-+++-. ...|.. + +...+.....+... ... ......+.++.+... +.
T Consensus 150 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~-------~--~~~~~~~~~GG~~~~~~~-~~~~e~v~avR~a~G~d~ 219 (410)
T 2gl5_A 150 TPEEYAEAARAALDDGYDAIKVDPLEIDRNGDD-------C--VFQNRNRNYSGLLLADQL-KMGEARIAAMREAMGDDA 219 (410)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCB-------T--TTSSCCGGGGSCCCHHHH-HHHHHHHHHHHHHHCSSS
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCcccc-------c--ccccccccccCccchhHH-HHHHHHHHHHHHhcCCCC
Confidence 67778888888889999999988620 000110 0 00000000000000 000 001112333333331 22
Q ss_pred ccccc--ccCCHHHHH----HHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHH
Q 018519 211 SLSWK--GVLTAEDAR----IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA 284 (354)
Q Consensus 211 ~~~w~--Gi~~~~~a~----~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kala 284 (354)
.+..+ +-.+.+++. .+.+.|++.|- + ...+..++.+.++++.+ ++||++++.+.+..++.+++.
T Consensus 220 ~l~vDan~~~~~~~ai~~~~~l~~~~i~~iE-------~-P~~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~ 289 (410)
T 2gl5_A 220 DIIVEIHSLLGTNSAIQFAKAIEKYRIFLYE-------E-PIHPLNSDNMQKVSRST--TIPIATGERSYTRWGYRELLE 289 (410)
T ss_dssp EEEEECTTCSCHHHHHHHHHHHGGGCEEEEE-------C-SSCSSCHHHHHHHHHHC--SSCEEECTTCCTTHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhcCCCeEE-------C-CCChhhHHHHHHHHhhC--CCCEEecCCcCCHHHHHHHHH
Confidence 23333 334666664 44556666553 1 11234678888888877 799999999999999999999
Q ss_pred cC-cCEEEEc
Q 018519 285 LG-ASGIFIG 293 (354)
Q Consensus 285 lG-Ad~V~ig 293 (354)
.| +|.|++-
T Consensus 290 ~~~~d~v~ik 299 (410)
T 2gl5_A 290 KQSIAVAQPD 299 (410)
T ss_dssp TTCCSEECCC
T ss_pred cCCCCEEecC
Confidence 87 7999884
No 336
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=88.74 E-value=2.4 Score=40.07 Aligned_cols=122 Identities=16% Similarity=0.088 Sum_probs=78.3
Q ss_pred CChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-CCc
Q 018519 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI-DRS 211 (354)
Q Consensus 133 ~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 211 (354)
.+++.+.+.++++.+.|++++-+.+++.. +.|+ ..+.++.+... +..
T Consensus 139 ~~~~~~~~~a~~~~~~G~~~~K~K~G~~~----~~d~----------------------------~~v~avR~~~g~~~~ 186 (356)
T 3ro6_B 139 KPVEETLAEAREHLALGFRVLKVKLCGDE----EQDF----------------------------ERLRRLHETLAGRAV 186 (356)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCSCH----HHHH----------------------------HHHHHHHHHHTTSSE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEeCCCH----HHHH----------------------------HHHHHHHHHhCCCCE
Confidence 57788888888888899999999887521 1111 11222222221 112
Q ss_pred cccc--ccCCHHHH----HHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHc
Q 018519 212 LSWK--GVLTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL 285 (354)
Q Consensus 212 ~~w~--Gi~~~~~a----~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalal 285 (354)
+..| +-.+.++| +.+.+.|++.|- |. ..+..++.+.++++.. ++||++++-+.+..|+.+.+..
T Consensus 187 l~vDan~~~~~~~a~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~~~~ 256 (356)
T 3ro6_B 187 VRVDPNQSYDRDGLLRLDRLVQELGIEFIE-------QP-FPAGRTDWLRALPKAI--RRRIAADESLLGPADAFALAAP 256 (356)
T ss_dssp EEEECTTCCCHHHHHHHHHHHHHTTCCCEE-------CC-SCTTCHHHHHTSCHHH--HHTEEESTTCCSHHHHHHHHSS
T ss_pred EEEeCCCCCCHHHHHHHHHHHHhcCCCEEE-------CC-CCCCcHHHHHHHHhcC--CCCEEeCCcCCCHHHHHHHHhc
Confidence 2222 22345554 456677888874 11 1233577777777766 7999999999999999999997
Q ss_pred C--cCEEEEcHHH
Q 018519 286 G--ASGIFIGRPV 296 (354)
Q Consensus 286 G--Ad~V~igr~~ 296 (354)
| +|.|++--..
T Consensus 257 ~~~~d~v~~k~~~ 269 (356)
T 3ro6_B 257 PAACGIFNIKLMK 269 (356)
T ss_dssp SCSCSEEEECHHH
T ss_pred CCcCCEEEEcccc
Confidence 5 8999987543
No 337
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=88.69 E-value=1 Score=41.58 Aligned_cols=91 Identities=20% Similarity=0.216 Sum_probs=52.1
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcChH---HHHHHHHHHhcCCccEEEcCCCCCHHHHHHH----HHcCcCEEEE
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPATI---MALEEVVKATQGRIPVFLDGGVRRGTDVFKA----LALGASGIFI 292 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~---~~l~~i~~~~~~~i~vi~~GGi~~g~dv~ka----lalGAd~V~i 292 (354)
.+.+..+++.|+|+|++.|+-|-. ...+.- +.+..+++.+++ -|+..|+..+ .++++. -.+|||++++
T Consensus 23 ~~lv~~li~~Gv~gl~~~GttGE~--~~Ls~eEr~~v~~~~~~~~~g--viaGvg~~~t-~~ai~la~~A~~~Gadavlv 97 (293)
T 1w3i_A 23 KIHAENLIRKGIDKLFVNGTTGLG--PSLSPEEKLENLKAVYDVTNK--IIFQVGGLNL-DDAIRLAKLSKDFDIVGIAS 97 (293)
T ss_dssp HHHHHHHHHTTCCEEEESSTTTTG--GGSCHHHHHHHHHHHHTTCSC--EEEECCCSCH-HHHHHHHHHGGGSCCSEEEE
T ss_pred HHHHHHHHHcCCCEEEECccccCh--hhCCHHHHHHHHHHHHHHcCC--EEEecCCCCH-HHHHHHHHHHHhcCCCEEEE
Confidence 355667789999999996654421 122222 233333444433 3444555444 444432 2379999999
Q ss_pred cHHHHHHHhhcCHHHHHHHHHHHHH
Q 018519 293 GRPVVYSLAAEGEKGVRRVLEMLRE 317 (354)
Q Consensus 293 gr~~l~~~~~~G~~gv~~~l~~l~~ 317 (354)
-.|+++. .-.++++.++++.+.+
T Consensus 98 ~~P~y~~--~~s~~~l~~~f~~va~ 120 (293)
T 1w3i_A 98 YAPYYYP--RMSEKHLVKYFKTLCE 120 (293)
T ss_dssp ECCCSCS--SCCHHHHHHHHHHHHH
T ss_pred cCCCCCC--CCCHHHHHHHHHHHHh
Confidence 9998764 0145666666655554
No 338
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=88.60 E-value=4.6 Score=38.86 Aligned_cols=123 Identities=13% Similarity=0.050 Sum_probs=76.9
Q ss_pred hHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCcccc
Q 018519 135 RNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSW 214 (354)
Q Consensus 135 ~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 214 (354)
++.+.+.++++.+.||+++-+.++....-.|.+.+|..+. | .. .. ..+..-.|
T Consensus 164 ~e~~~~~a~~~~~~G~~~iKlKv~~~~d~~~v~avR~a~G-~-~~--~L-----------------------~vDaN~~w 216 (400)
T 3mwc_A 164 IETLIHQVEESLQEGYRRIKIKIKPGWDVEPLQETRRAVG-D-HF--PL-----------------------WTDANSSF 216 (400)
T ss_dssp HHHHHHHHHHHHHHTCSCEEEECBTTBSHHHHHHHHHHHC-T-TS--CE-----------------------EEECTTCC
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeCcchHHHHHHHHHHhcC-C-CC--EE-----------------------EEeCCCCC
Confidence 7777788888888899999998742110011111121110 0 00 00 00112244
Q ss_pred cccCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcC-cCEEEEc
Q 018519 215 KGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIG 293 (354)
Q Consensus 215 ~Gi~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalG-Ad~V~ig 293 (354)
+--. .+.++.+.+.|++.|- | ...+..++.+.++++.. .+||+++.-+.+..|+.+++..| +|.|++-
T Consensus 217 ~~~~-~~~~~~l~~~~i~~iE-------q-P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k 285 (400)
T 3mwc_A 217 ELDQ-WETFKAMDAAKCLFHE-------Q-PLHYEALLDLKELGERI--ETPICLDESLISSRVAEFVAKLGISNIWNIK 285 (400)
T ss_dssp CGGG-HHHHHHHGGGCCSCEE-------S-CSCTTCHHHHHHHHHHS--SSCEEESTTCCSHHHHHHHHHTTCCSEEEEC
T ss_pred CHHH-HHHHHHHHhcCCCEEe-------C-CCChhhHHHHHHHHhhC--CCCEEEeCCcCCHHHHHHHHhcCCCCEEEEc
Confidence 3223 5666777788888774 1 11233577888888877 79999999999999999999987 7999886
Q ss_pred HH
Q 018519 294 RP 295 (354)
Q Consensus 294 r~ 295 (354)
-.
T Consensus 286 ~~ 287 (400)
T 3mwc_A 286 IQ 287 (400)
T ss_dssp HH
T ss_pred ch
Confidence 43
No 339
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=88.57 E-value=4.6 Score=38.35 Aligned_cols=121 Identities=7% Similarity=0.009 Sum_probs=77.6
Q ss_pred hHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-CCccc
Q 018519 135 RNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI-DRSLS 213 (354)
Q Consensus 135 ~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 213 (354)
++.+.+.++++.+.||+++-+.++++.. .-.. ....+.++.+.+. +.++.
T Consensus 147 ~e~~~~~a~~~~~~Gf~~iKlk~g~~g~-~~~~----------------------------d~~~v~avR~a~g~~~~l~ 197 (374)
T 3sjn_A 147 PEDNVAIVQGLKDQGFSSIKFGGGVMGD-DPDT----------------------------DYAIVKAVREAAGPEMEVQ 197 (374)
T ss_dssp GGGGHHHHHHHHTTTCSEEEEECTTTTS-CHHH----------------------------HHHHHHHHHHHHCSSSEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEeccCCCCC-CHHH----------------------------HHHHHHHHHHHhCCCCeEE
Confidence 3777788888888999999999876420 0000 0111222222221 12232
Q ss_pred cc--ccCC-HHHHHH----HHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcC
Q 018519 214 WK--GVLT-AEDARI----AVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG 286 (354)
Q Consensus 214 w~--Gi~~-~~~a~~----~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalG 286 (354)
.+ +-.+ .++|.+ +.+.|++.|- |. ..+..++.+.++++.. ++||++++-+.+..|+.+++..|
T Consensus 198 vDan~~~~d~~~A~~~~~~l~~~~i~~iE-------qP-~~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~l~~~ 267 (374)
T 3sjn_A 198 IDLASKWHTCGHSAMMAKRLEEFNLNWIE-------EP-VLADSLISYEKLSRQV--SQKIAGGESLTTRYEFQEFITKS 267 (374)
T ss_dssp EECTTTTCSHHHHHHHHHHSGGGCCSEEE-------CS-SCTTCHHHHHHHHHHC--SSEEEECTTCCHHHHHHHHHHHH
T ss_pred EECCCCCCCHHHHHHHHHHhhhcCceEEE-------CC-CCcccHHHHHHHHhhC--CCCEEeCCCcCCHHHHHHHHHcC
Confidence 22 2345 676654 4566887774 11 1233578888888876 89999999999999999999975
Q ss_pred -cCEEEEcH
Q 018519 287 -ASGIFIGR 294 (354)
Q Consensus 287 -Ad~V~igr 294 (354)
+|.|++--
T Consensus 268 ~~d~v~~k~ 276 (374)
T 3sjn_A 268 NADIVQPDI 276 (374)
T ss_dssp CCSEECCBT
T ss_pred CCCEEEeCc
Confidence 79998753
No 340
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=88.57 E-value=9.7 Score=35.97 Aligned_cols=125 Identities=15% Similarity=0.114 Sum_probs=78.4
Q ss_pred cCChHHHHHHHHHHHHc-CCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhh-cC
Q 018519 132 YKDRNVVAQLVRRAERA-GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQ-ID 209 (354)
Q Consensus 132 ~~d~~~~~~~~~~a~~~-G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 209 (354)
..+++.+.+.++++.+. |++++-+.++... . ..| ...+.++.+.. .+
T Consensus 137 ~~~~~~~~~~a~~~~~~~G~~~~K~K~g~~~--~-~~d----------------------------~~~v~avR~a~g~~ 185 (367)
T 3dg3_A 137 FDDPVKMVAEAERIRETYGINTFKVKVGRRP--V-QLD----------------------------TAVVRALRERFGDA 185 (367)
T ss_dssp SSCHHHHHHHHHHHHHHHCCCEEEEECCCSS--T-HHH----------------------------HHHHHHHHHHHGGG
T ss_pred CCCHHHHHHHHHHHHHhcCccEEEEeeCCCh--h-hhH----------------------------HHHHHHHHHHhCCC
Confidence 35778877778777777 9999999886421 0 001 01122222222 11
Q ss_pred Cccccc--ccCCHHHHHHH----HHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHH
Q 018519 210 RSLSWK--GVLTAEDARIA----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKAL 283 (354)
Q Consensus 210 ~~~~w~--Gi~~~~~a~~~----~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kal 283 (354)
..+..| +-.+.++|.+. .+.|++.|- | ...+..++.+.++++.. ++||++++.+.+..|+.+++
T Consensus 186 ~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE-------q-P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i 255 (367)
T 3dg3_A 186 IELYVDGNRGWSAAESLRAMREMADLDLLFAE-------E-LCPADDVLSRRRLVGQL--DMPFIADESVPTPADVTREV 255 (367)
T ss_dssp SEEEEECTTCSCHHHHHHHHHHTTTSCCSCEE-------S-CSCTTSHHHHHHHHHHC--SSCEEECTTCSSHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHhCCCEEE-------C-CCCcccHHHHHHHHHhC--CCCEEecCCcCCHHHHHHHH
Confidence 222222 33466666543 445666653 1 11223577788888876 79999999999999999999
Q ss_pred HcC-cCEEEEcHHHH
Q 018519 284 ALG-ASGIFIGRPVV 297 (354)
Q Consensus 284 alG-Ad~V~igr~~l 297 (354)
..| +|.|++--..+
T Consensus 256 ~~~~~d~v~~k~~~~ 270 (367)
T 3dg3_A 256 LGGSATAISIKTART 270 (367)
T ss_dssp HHTSCSEEEECHHHH
T ss_pred HcCCCCEEEeehhhh
Confidence 987 89999965443
No 341
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=88.56 E-value=18 Score=34.69 Aligned_cols=235 Identities=12% Similarity=0.068 Sum_probs=115.3
Q ss_pred eeEcCeee---ccceEecccccccccCChhhHHHHHHHHHcCCcEEecCCCCCCHHHHHhhCCCceEEEE----------
Q 018519 63 TTVLGFKI---SMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQL---------- 129 (354)
Q Consensus 63 t~l~g~~l---~~Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~s~~~~~~~eei~~~~~~~~~~QL---------- 129 (354)
.+|.++.+ ..|++||=+|..-...-+--..++++|+++|+-.+=... ...+++. .|...-||.
T Consensus 16 ~~~~~~~ig~~~~~~IIAEiG~NH~Gsle~A~~li~~Ak~aGAdavKfQ~--~k~~tl~--s~~~~~fq~~~~~~~~~ye 91 (385)
T 1vli_A 16 FQIANKTVGKDAPVFIIAEAGINHDGKLDQAFALIDAAAEAGADAVKFQM--FQADRMY--QKDPGLYKTAAGKDVSIFS 91 (385)
T ss_dssp EEETTEEEETTSCCEEEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEECC--BCGGGGT--SCCC---------CCCHHH
T ss_pred eeECCEEeCCCCCcEEEEeecCcccccHHHHHHHHHHHHHhCCCEEeeee--eccCccc--CcchhhhccCCCCCccHHH
Confidence 45556665 358999988653211112224889999999988664321 2222221 110001221
Q ss_pred -ee--cCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCC-cCccccccCCccCcCcccchhhHHHHHh
Q 018519 130 -YV--YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPP-FLTLKNFQGLDLGKMDEANDSGLAAYVA 205 (354)
Q Consensus 130 -y~--~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (354)
|- .-..+....+.+.+++.|...+ .+|.. .+.-+.-..+.+|. ++...++.++ .+-+.+.
T Consensus 92 ~~~~~~l~~e~~~~L~~~~~~~Gi~~~----stpfD-~~svd~l~~~~vd~~KIgS~~~~N~-----------pLL~~va 155 (385)
T 1vli_A 92 LVQSMEMPAEWILPLLDYCREKQVIFL----STVCD-EGSADLLQSTSPSAFKIASYEINHL-----------PLLKYVA 155 (385)
T ss_dssp HGGGBSSCGGGHHHHHHHHHHTTCEEE----CBCCS-HHHHHHHHTTCCSCEEECGGGTTCH-----------HHHHHHH
T ss_pred HHHhcCCCHHHHHHHHHHHHHcCCcEE----EccCC-HHHHHHHHhcCCCEEEECcccccCH-----------HHHHHHH
Confidence 11 1245667777788888886543 23331 12222222222110 1122222221 2334455
Q ss_pred hhcCCcccccccCCHHHHHHH----HHhCC-CEEEEecCCcCCCCC--CcChHHHHHHHHHHhcCCccEEEcCCCCCH--
Q 018519 206 GQIDRSLSWKGVLTAEDARIA----VQAGA-AGIIVSNHGARQLDY--VPATIMALEEVVKATQGRIPVFLDGGVRRG-- 276 (354)
Q Consensus 206 ~~~~~~~~w~Gi~~~~~a~~~----~~~G~-d~I~vs~~gg~~~~~--~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g-- 276 (354)
+...|.+.-.|..+.++...| .+.|. +.+.+ |+-+.... ....+..++.+++..+ .+||..+ +=..|
T Consensus 156 ~~gKPViLStGmaTl~Ei~~Ave~i~~~Gn~~iiLl--hc~s~YPtp~~~~nL~aI~~Lk~~f~-~lpVG~S-dHt~G~~ 231 (385)
T 1vli_A 156 RLNRPMIFSTAGAEISDVHEAWRTIRAEGNNQIAIM--HCVAKYPAPPEYSNLSVIPMLAAAFP-EAVIGFS-DHSEHPT 231 (385)
T ss_dssp TTCSCEEEECTTCCHHHHHHHHHHHHTTTCCCEEEE--EECSSSSCCGGGCCTTHHHHHHHHST-TSEEEEE-ECCSSSS
T ss_pred hcCCeEEEECCCCCHHHHHHHHHHHHHCCCCcEEEE--eccCCCCCChhhcCHHHHHHHHHHcC-CCCEEeC-CCCCCch
Confidence 556677666687788876655 45787 55555 43222211 1123456776666531 4788544 34444
Q ss_pred HHHHHHHHcCcCEEEEcHHHHHHHhhcCHHH---H-HHHHHHHHHHHHHHH
Q 018519 277 TDVFKALALGASGIFIGRPVVYSLAAEGEKG---V-RRVLEMLREEFELAM 323 (354)
Q Consensus 277 ~dv~kalalGAd~V~igr~~l~~~~~~G~~g---v-~~~l~~l~~el~~~m 323 (354)
.=.+.|+++||+ +|=+-|-..-...|.++ + -+-+..|.++++..-
T Consensus 232 ~~~~AAvAlGA~--iIEkHftldra~~G~D~~~SL~P~ef~~lv~~ir~i~ 280 (385)
T 1vli_A 232 EAPCAAVRLGAK--LIEKHFTIDKNLPGADHSFALNPDELKEMVDGIRKTE 280 (385)
T ss_dssp HHHHHHHHTTCS--EEEEEBCSCTTSSCSSCTTSBCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCC--EEEeCCCccccCCCCchhhhCCHHHHHHHHHHHHHHH
Confidence 344577889999 45543321111223211 1 124566777777777
No 342
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=88.45 E-value=3.9 Score=38.84 Aligned_cols=120 Identities=15% Similarity=0.167 Sum_probs=76.3
Q ss_pred CChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-CCc
Q 018519 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI-DRS 211 (354)
Q Consensus 133 ~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 211 (354)
.+++.+.+.++++.+.||+++-+.++... +.|+ ..+.++.+... +..
T Consensus 139 ~~~e~~~~~a~~~~~~G~~~~K~KvG~~~----~~d~----------------------------~~v~avR~~~g~~~~ 186 (368)
T 3q45_A 139 DEPHKMAADAVQIKKNGFEIIKVKVGGSK----ELDV----------------------------ERIRMIREAAGDSIT 186 (368)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCSCH----HHHH----------------------------HHHHHHHHHHCSSSE
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEecCCH----HHHH----------------------------HHHHHHHHHhCCCCe
Confidence 57788888888888899999999876421 1111 11222222221 112
Q ss_pred cccc--ccCCHHHHH----HHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHc
Q 018519 212 LSWK--GVLTAEDAR----IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL 285 (354)
Q Consensus 212 ~~w~--Gi~~~~~a~----~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalal 285 (354)
+..| +-.+.++|. .+.+.|++.|- | ...+..++.+.++++.. .+||++++.+.+..|+.+.+..
T Consensus 187 l~vDaN~~~~~~~A~~~~~~l~~~~i~~iE-------q-P~~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~~~~ 256 (368)
T 3q45_A 187 LRIDANQGWSVETAIETLTLLEPYNIQHCE-------E-PVSRNLYTALPKIRQAC--RIPIMADESCCNSFDAERLIQI 256 (368)
T ss_dssp EEEECTTCBCHHHHHHHHHHHGGGCCSCEE-------C-CBCGGGGGGHHHHHHTC--SSCEEESTTCCSHHHHHHHHHT
T ss_pred EEEECCCCCChHHHHHHHHHHhhcCCCEEE-------C-CCChhHHHHHHHHHhhC--CCCEEEcCCcCCHHHHHHHHHc
Confidence 2222 224566654 45567777774 1 11222456677777766 7999999999999999999997
Q ss_pred C-cCEEEEcH
Q 018519 286 G-ASGIFIGR 294 (354)
Q Consensus 286 G-Ad~V~igr 294 (354)
| +|.|++--
T Consensus 257 ~~~d~v~~k~ 266 (368)
T 3q45_A 257 QACDSFNLKL 266 (368)
T ss_dssp TCCSEEEECT
T ss_pred CCCCeEEech
Confidence 6 79998864
No 343
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=88.44 E-value=4.9 Score=38.08 Aligned_cols=139 Identities=12% Similarity=0.097 Sum_probs=79.4
Q ss_pred cCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHh-h-h--ccCCCCcCcccc---ccCCccCcCcccchhhHHHHH
Q 018519 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADI-K-N--RFTLPPFLTLKN---FQGLDLGKMDEANDSGLAAYV 204 (354)
Q Consensus 132 ~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~-r-~--~~~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 204 (354)
..|.+...++++.|.++|++++-.-.=.| +.+ . . .|..+.. +... ++... ........+.+..
T Consensus 31 ~gs~e~a~~li~~ak~aGadavKfq~~k~------~tl~s~~~~~fq~~~~-~~~~y~~~~~~~---l~~e~~~~L~~~~ 100 (349)
T 2wqp_A 31 EGSLKTAFEMVDAAYNAGAEVVKHQTHIV------EDEMSDEAKQVIPGNA-DVSIYEIMERCA---LNEEDEIKLKEYV 100 (349)
T ss_dssp TTCHHHHHHHHHHHHHHTCSEEEEEECCH------HHHCCGGGGGCCCTTC-SSCHHHHHHHHC---CCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCEEeeeeccc------ccccCcchhccccCCC-CccHHHHHHHhC---CCHHHHHHHHHHH
Confidence 35888899999999999999986532221 111 0 0 0211100 0000 00000 0001112233444
Q ss_pred hhhcCCcccccccCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHH
Q 018519 205 AGQIDRSLSWKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA 284 (354)
Q Consensus 205 ~~~~~~~~~w~Gi~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kala 284 (354)
+....+.+ .-+++.+.+..+.+.|+|.+.|. .+ -...+..|.++.+ .+.|||.+-|+.|-+++..|+.
T Consensus 101 ~~~Gi~~~--st~~d~~svd~l~~~~v~~~KI~---S~----~~~n~~LL~~va~---~gkPviLstGmat~~Ei~~Ave 168 (349)
T 2wqp_A 101 ESKGMIFI--STLFSRAAALRLQRMDIPAYKIG---SG----ECNNYPLIKLVAS---FGKPIILSTGMNSIESIKKSVE 168 (349)
T ss_dssp HHTTCEEE--EEECSHHHHHHHHHHTCSCEEEC---GG----GTTCHHHHHHHHT---TCSCEEEECTTCCHHHHHHHHH
T ss_pred HHhCCeEE--EeeCCHHHHHHHHhcCCCEEEEC---cc----cccCHHHHHHHHh---cCCeEEEECCCCCHHHHHHHHH
Confidence 33221111 14578999999999999999992 11 2334666766664 2789999999999999887764
Q ss_pred ----cCcCEEEE
Q 018519 285 ----LGASGIFI 292 (354)
Q Consensus 285 ----lGAd~V~i 292 (354)
.|.+.+.+
T Consensus 169 ~i~~~G~~iiLl 180 (349)
T 2wqp_A 169 IIREAGVPYALL 180 (349)
T ss_dssp HHHHHTCCEEEE
T ss_pred HHHHcCCCEEEE
Confidence 46665554
No 344
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=88.42 E-value=5 Score=38.36 Aligned_cols=121 Identities=18% Similarity=0.106 Sum_probs=77.9
Q ss_pred CChHHHHHHHHHHHHc-CCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-CC
Q 018519 133 KDRNVVAQLVRRAERA-GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI-DR 210 (354)
Q Consensus 133 ~d~~~~~~~~~~a~~~-G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 210 (354)
.+++.+.+.++++.+. |++++-+.++.+.. ..| ...+.++.+... +.
T Consensus 166 ~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~---~~d----------------------------~~~v~avR~a~G~~~ 214 (383)
T 3toy_A 166 LDARDDERTLRTACDEHGFRAIKSKGGHGDL---ATD----------------------------EAMIKGLRALLGPDI 214 (383)
T ss_dssp CCHHHHHHHHHHHHHTSCCCEEEEECCSSCH---HHH----------------------------HHHHHHHHHHHCTTS
T ss_pred CCHHHHHHHHHHHHHccCCcEEEEecCCCCH---HHH----------------------------HHHHHHHHHHhCCCC
Confidence 4777888888888888 99999998865311 011 111222222221 12
Q ss_pred ccccc--ccCCHHHHH----HHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHH
Q 018519 211 SLSWK--GVLTAEDAR----IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA 284 (354)
Q Consensus 211 ~~~w~--Gi~~~~~a~----~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kala 284 (354)
.+..| +-.+.++|. .+.+.|++.|- | ...+..++.+.++++.. .+||+++.-+.+..|+.+++.
T Consensus 215 ~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iE-------e-P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~ 284 (383)
T 3toy_A 215 ALMLDFNQSLDPAEATRRIARLADYDLTWIE-------E-PVPQENLSGHAAVRERS--EIPIQAGENWWFPRGFAEAIA 284 (383)
T ss_dssp EEEEECTTCSCHHHHHHHHHHHGGGCCSEEE-------C-CSCTTCHHHHHHHHHHC--SSCEEECTTCCHHHHHHHHHH
T ss_pred eEEEeCCCCCCHHHHHHHHHHHHhhCCCEEE-------C-CCCcchHHHHHHHHhhc--CCCEEeCCCcCCHHHHHHHHH
Confidence 22222 234566654 45567877773 1 11233577888888876 799999999999999999999
Q ss_pred cC-cCEEEEcH
Q 018519 285 LG-ASGIFIGR 294 (354)
Q Consensus 285 lG-Ad~V~igr 294 (354)
.| +|.|++--
T Consensus 285 ~~a~d~v~ik~ 295 (383)
T 3toy_A 285 AGASDFIMPDL 295 (383)
T ss_dssp HTCCSEECCCT
T ss_pred cCCCCEEEeCc
Confidence 87 78888753
No 345
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=88.35 E-value=8.7 Score=36.73 Aligned_cols=123 Identities=16% Similarity=0.122 Sum_probs=77.4
Q ss_pred CChHHHHHHHHHHHHc---CCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-
Q 018519 133 KDRNVVAQLVRRAERA---GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI- 208 (354)
Q Consensus 133 ~d~~~~~~~~~~a~~~---G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 208 (354)
.+++.+.+.++++.+. |++++-+.++.+.. ..| ...+.++.+...
T Consensus 170 ~~~e~~~~~a~~~~~~~~~G~~~iKlKvG~~~~---~~d----------------------------~~~v~avR~a~G~ 218 (390)
T 3ugv_A 170 SPAEVAAEAVELKAEGQGTGFKGLKLRMGRDDP---AVD----------------------------IETAEAVWDAVGR 218 (390)
T ss_dssp CHHHHHHHHHHHHHTTCTTCCSEEEEECCCSSH---HHH----------------------------HHHHHHHHHHHCT
T ss_pred CCHHHHHHHHHHHHHhhhCCCcEEEEecCCCCH---HHH----------------------------HHHHHHHHHHhCC
Confidence 4566777777777778 99999998865321 001 111222222221
Q ss_pred CCccccc--ccCCHHHHH----HHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHH
Q 018519 209 DRSLSWK--GVLTAEDAR----IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKA 282 (354)
Q Consensus 209 ~~~~~w~--Gi~~~~~a~----~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~ka 282 (354)
+..+..| +-.++++|. .+.+.|++.|- |. ..+..++.+.++++.. ++||+++.-+.+..|+.++
T Consensus 219 ~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~ 288 (390)
T 3ugv_A 219 DTALMVDFNQGLDMAEAMHRTRQIDDLGLEWIE-------EP-VVYDNFDGYAQLRHDL--KTPLMIGENFYGPREMHQA 288 (390)
T ss_dssp TSEEEEECTTCCCHHHHHHHHHHHTTSCCSEEE-------CC-SCTTCHHHHHHHHHHC--SSCEEECTTCCSHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHhhCCCEEE-------CC-CCcccHHHHHHHHHhc--CCCEEeCCCcCCHHHHHHH
Confidence 1222222 334666654 44456777663 11 1233577888888876 7999999999999999999
Q ss_pred HHcC-cCEEEEcHHH
Q 018519 283 LALG-ASGIFIGRPV 296 (354)
Q Consensus 283 lalG-Ad~V~igr~~ 296 (354)
+..| +|.|++--..
T Consensus 289 i~~~a~d~v~ik~~~ 303 (390)
T 3ugv_A 289 LQAGACDLVMPDFMR 303 (390)
T ss_dssp HHTTCCSEECCBHHH
T ss_pred HHcCCCCEEEeCccc
Confidence 9987 7898886543
No 346
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=88.33 E-value=3 Score=39.85 Aligned_cols=137 Identities=16% Similarity=0.118 Sum_probs=79.1
Q ss_pred CChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-CCc
Q 018519 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI-DRS 211 (354)
Q Consensus 133 ~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 211 (354)
.+++.+.+.++++.+.||+++-+++++...|.. .+++. .-+-....+ ......+.++.+... +..
T Consensus 136 ~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~----~~~~~-~gg~~~~~~---------~~~~e~v~avr~a~G~d~~ 201 (392)
T 2poz_A 136 DTPDEFARAVERPLKEGYGALKFYPLAQRVGSA----LQHVT-RRSMSAEAI---------ELAYRRVKAVRDAAGPEIE 201 (392)
T ss_dssp CSHHHHHHHTHHHHHTTCSEEEECCCCEEETTE----EECCB-TTBCCHHHH---------HHHHHHHHHHHHHHCTTSE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccccccccc----ccccc-cCCcchhhH---------HHHHHHHHHHHHhcCCCCE
Confidence 467777788888889999999998875321110 00000 000000000 001112333333221 222
Q ss_pred cccc--ccCCHHHHH----HHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHc
Q 018519 212 LSWK--GVLTAEDAR----IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL 285 (354)
Q Consensus 212 ~~w~--Gi~~~~~a~----~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalal 285 (354)
+..+ +-.+.+++. .+.+.|++.|- + ...+..++.+.++++.+ ++||++++.+.+..++.+.+..
T Consensus 202 l~vD~n~~~~~~~a~~~~~~l~~~~i~~iE-------~-P~~~~~~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i~~ 271 (392)
T 2poz_A 202 LMVDLSGGLTTDETIRFCRKIGELDICFVE-------E-PCDPFDNGALKVISEQI--PLPIAVGERVYTRFGFRKIFEL 271 (392)
T ss_dssp EEEECTTCSCHHHHHHHHHHHGGGCEEEEE-------C-CSCTTCHHHHHHHHHHC--SSCEEECTTCCHHHHHHHHHTT
T ss_pred EEEECCCCCCHHHHHHHHHHHHhcCCCEEE-------C-CCCcccHHHHHHHHhhC--CCCEEecCCcCCHHHHHHHHHc
Confidence 3223 334666664 44556666553 1 11234678888888877 7999999999999999999998
Q ss_pred C-cCEEEEc
Q 018519 286 G-ASGIFIG 293 (354)
Q Consensus 286 G-Ad~V~ig 293 (354)
| +|.|++-
T Consensus 272 ~~~d~v~ik 280 (392)
T 2poz_A 272 QACGIIQPD 280 (392)
T ss_dssp TCCSEECCC
T ss_pred CCCCEEecC
Confidence 7 8999873
No 347
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=88.24 E-value=6.1 Score=35.62 Aligned_cols=86 Identities=16% Similarity=0.148 Sum_probs=54.4
Q ss_pred HHHHHhhhcCCcccccccCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHH
Q 018519 200 LAAYVAGQIDRSLSWKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDV 279 (354)
Q Consensus 200 ~~~~~~~~~~~~~~w~Gi~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv 279 (354)
+..+.+.+..|.+-.+=|.+.-....+..+|||+|.+...- + ...++..+.+..+.+ .+.++++ +++.+++
T Consensus 93 L~~ir~~v~lPvLrKDfi~~~~qi~ea~~~GAD~ilLi~a~---l--~~~~l~~l~~~a~~l--Gl~~lvE--v~~~eE~ 163 (251)
T 1i4n_A 93 VRAARNLTCRPILAKDFYIDTVQVKLASSVGADAILIIARI---L--TAEQIKEIYEAAEEL--GMDSLVE--VHSREDL 163 (251)
T ss_dssp HHHHHTTCCSCEEEECCCCSTHHHHHHHHTTCSEEEEEGGG---S--CHHHHHHHHHHHHTT--TCEEEEE--ECSHHHH
T ss_pred HHHHHHhCCCCEEEeeCCCCHHHHHHHHHcCCCEEEEeccc---C--CHHHHHHHHHHHHHc--CCeEEEE--eCCHHHH
Confidence 44444444445553332344445666999999999985431 1 112333333333333 5667776 7899999
Q ss_pred HHHHHc-CcCEEEEcH
Q 018519 280 FKALAL-GASGIFIGR 294 (354)
Q Consensus 280 ~kalal-GAd~V~igr 294 (354)
.+|+.+ |++.|++-.
T Consensus 164 ~~A~~l~g~~iIGinn 179 (251)
T 1i4n_A 164 EKVFSVIRPKIIGINT 179 (251)
T ss_dssp HHHHTTCCCSEEEEEC
T ss_pred HHHHhcCCCCEEEEeC
Confidence 999999 999998875
No 348
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=88.18 E-value=15 Score=33.50 Aligned_cols=179 Identities=16% Similarity=0.101 Sum_probs=98.8
Q ss_pred ceEecccccccccCChhhHHHHHHHHHcCCcEEe--c---CCCCCCHHHHHh-------h-CC-CceEEEEeecCChHHH
Q 018519 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--S---SWSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNVV 138 (354)
Q Consensus 73 Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~--s---~~~~~~~eei~~-------~-~~-~~~~~QLy~~~d~~~~ 138 (354)
|.++.||.-.+ .+.++-..+.+-.-+.|+...+ + +..+.+.||-.+ . .. -+.+...- ..+....
T Consensus 9 ~a~vTPf~~d~-iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~a 86 (292)
T 3daq_A 9 VALTTPFTNNK-VNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTG-TNDTEKS 86 (292)
T ss_dssp EECCCCEETTE-ECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSCHHHH
T ss_pred EeeecCcCCCC-cCHHHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCC-cccHHHH
Confidence 55566764322 2333334666666678875443 2 233456665322 1 22 45666653 4677888
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCccccc---
Q 018519 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWK--- 215 (354)
Q Consensus 139 ~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~--- 215 (354)
.++++.|+++|++++.+. .|.. .-| +.. ....-++++.+....|.+...
T Consensus 87 i~la~~a~~~Gadavlv~--~P~y-----------~~~---~~~------------~l~~~f~~ia~a~~lPiilYn~P~ 138 (292)
T 3daq_A 87 IQASIQAKALGADAIMLI--TPYY-----------NKT---NQR------------GLVKHFEAIADAVKLPVVLYNVPS 138 (292)
T ss_dssp HHHHHHHHHHTCSEEEEE--CCCS-----------SCC---CHH------------HHHHHHHHHHHHHCSCEEEEECHH
T ss_pred HHHHHHHHHcCCCEEEEC--CCCC-----------CCC---CHH------------HHHHHHHHHHHhCCCCEEEEeccc
Confidence 899999999999998875 2321 101 000 011113344444444544433
Q ss_pred --cc-CCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcC-CccEEEcCCCCCHHHHHHHHHcCcCEEE
Q 018519 216 --GV-LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQG-RIPVFLDGGVRRGTDVFKALALGASGIF 291 (354)
Q Consensus 216 --Gi-~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~-~i~vi~~GGi~~g~dv~kalalGAd~V~ 291 (354)
|+ ++++...++.+.. ..+-+= + ...++..+.++.+..++ +..| .+|. -.-++.++++||+++.
T Consensus 139 ~tg~~l~~~~~~~La~~p-nivgiK-------~-ssgd~~~~~~~~~~~~~~~f~v-~~G~---d~~~~~~l~~G~~G~i 205 (292)
T 3daq_A 139 RTNMTIEPETVEILSQHP-YIVALK-------D-ATNDFEYLEEVKKRIDTNSFAL-YSGN---DDNVVEYYQRGGQGVI 205 (292)
T ss_dssp HHSCCCCHHHHHHHHTST-TEEEEE-------E-CCCCHHHHHHHHTTSCTTTSEE-EESC---GGGHHHHHHTTCCEEE
T ss_pred ccCCCCCHHHHHHHhcCC-CEEEEE-------e-CCCCHHHHHHHHHHCCCCCEEE-EECC---HHHHHHHHhcCCCEEE
Confidence 54 6888888887632 222221 1 11135556666665554 4544 4443 2347788999999999
Q ss_pred EcH
Q 018519 292 IGR 294 (354)
Q Consensus 292 igr 294 (354)
-+.
T Consensus 206 s~~ 208 (292)
T 3daq_A 206 SVI 208 (292)
T ss_dssp ESG
T ss_pred eCH
Confidence 887
No 349
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=88.16 E-value=2.8 Score=38.42 Aligned_cols=67 Identities=21% Similarity=0.279 Sum_probs=48.1
Q ss_pred CHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCC--CCCHHHHHHHHHcCcCEEEEcHHH
Q 018519 219 TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGG--VRRGTDVFKALALGASGIFIGRPV 296 (354)
Q Consensus 219 ~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GG--i~~g~dv~kalalGAd~V~igr~~ 296 (354)
..++++...++|||.|++ + +.++.+.+.++.+.+ ++|+-+..+ ..+ +.+.-.+|.+.|..+...
T Consensus 170 ai~Ra~ay~eAGAd~i~~--e-------~~~~~~~~~~i~~~~--~~P~n~~~~~~~~~---~~eL~~lGv~~v~~~~~~ 235 (275)
T 2ze3_A 170 TVRRGQAYADAGADGIFV--P-------LALQSQDIRALADAL--RVPLNVMAFPGSPV---PRALLDAGAARVSFGQSL 235 (275)
T ss_dssp HHHHHHHHHHTTCSEEEC--T-------TCCCHHHHHHHHHHC--SSCEEEECCTTSCC---HHHHHHTTCSEEECTTHH
T ss_pred HHHHHHHHHHCCCCEEEE--C-------CCCCHHHHHHHHHhc--CCCEEEecCCCCCC---HHHHHHcCCcEEEEChHH
Confidence 345667889999999998 3 356678888999988 577755533 333 334445999999999876
Q ss_pred HHH
Q 018519 297 VYS 299 (354)
Q Consensus 297 l~~ 299 (354)
+.+
T Consensus 236 ~ra 238 (275)
T 2ze3_A 236 MLA 238 (275)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 350
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=88.09 E-value=3.6 Score=38.89 Aligned_cols=116 Identities=16% Similarity=0.125 Sum_probs=74.1
Q ss_pred CChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-CCc
Q 018519 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI-DRS 211 (354)
Q Consensus 133 ~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 211 (354)
.+.+.+.+.++++.+.||+++-++++ |.. . ...+.++.+... +..
T Consensus 140 ~~~~~~~~~a~~~~~~Gf~~vKik~~-~~~---~------------------------------~e~v~avr~~~g~~~~ 185 (368)
T 1sjd_A 140 DTIPQLLDVVGGYLDEGYVRIKLKIE-PGW---D------------------------------VEPVRAVRERFGDDVL 185 (368)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEECB-TTB---S------------------------------HHHHHHHHHHHCTTSE
T ss_pred CCHHHHHHHHHHHHHhCccEEEEecC-chh---H------------------------------HHHHHHHHHhcCCCce
Confidence 36777778888888899999999874 210 0 001122211110 111
Q ss_pred ------ccccccCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHc
Q 018519 212 ------LSWKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL 285 (354)
Q Consensus 212 ------~~w~Gi~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalal 285 (354)
-.|+--. .+.++.+.+.|++.|- |. ..+..++.+.++++.+ ++||++++-+.+..|+.+.+..
T Consensus 186 l~vDan~~~~~~~-~~~~~~l~~~~i~~iE-------~P-~~~~~~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i~~ 254 (368)
T 1sjd_A 186 LQVDANTAYTLGD-APQLARLDPFGLLLIE-------QP-LEEEDVLGHAELARRI--QTPICLDESIVSARAAADAIKL 254 (368)
T ss_dssp EEEECTTCCCGGG-HHHHHTTGGGCCSEEE-------CC-SCTTCHHHHHHHHTTC--SSCEEESTTCCSHHHHHHHHHT
T ss_pred EEEeccCCCCHHH-HHHHHHHHhcCCCeEe-------CC-CChhhHHHHHHHHHhC--CCCEEECCCcCCHHHHHHHHHc
Confidence 1232112 4555556677888763 11 1233577788887765 7999999999999999999998
Q ss_pred C-cCEEEEc
Q 018519 286 G-ASGIFIG 293 (354)
Q Consensus 286 G-Ad~V~ig 293 (354)
| +|.|++=
T Consensus 255 ~~~d~v~ik 263 (368)
T 1sjd_A 255 GAVQIVNIK 263 (368)
T ss_dssp TCCSEEEEC
T ss_pred CCCCEEEec
Confidence 7 7999983
No 351
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=88.05 E-value=3.1 Score=40.19 Aligned_cols=132 Identities=17% Similarity=0.145 Sum_probs=81.0
Q ss_pred CChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-CCc
Q 018519 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI-DRS 211 (354)
Q Consensus 133 ~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 211 (354)
.+++.+.+.++++.+.||+++-+.++.+..+.. +. .+. ...+ ......+.++.+.+. +..
T Consensus 143 ~~~e~~~~~a~~~~~~G~~~iKlK~g~~~~~~~------g~-~~~---~~~~---------~~d~~~v~avR~a~G~d~~ 203 (412)
T 4e4u_A 143 DDPDLAAECAAENVKLGFTAVKFDPAGPYTAYS------GH-QLS---LEVL---------DRCELFCRRVREAVGSKAD 203 (412)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEECCSCCCBTTC------CB-CCC---HHHH---------HHHHHHHHHHHHHHTTSSE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCcccc------cc-ccc---hhhH---------HHHHHHHHHHHHHhCCCCe
Confidence 467788888888888899999998876532100 00 000 0000 001112333333321 223
Q ss_pred cccc--ccCCHHHHH----HHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHc
Q 018519 212 LSWK--GVLTAEDAR----IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL 285 (354)
Q Consensus 212 ~~w~--Gi~~~~~a~----~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalal 285 (354)
+..+ +-.+.++|. .+.+.|++.|- |. ..+..++.+.++++.+ ++||++++-+.+..|+.+++..
T Consensus 204 l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE-------eP-~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~ 273 (412)
T 4e4u_A 204 LLFGTHGQMVPSSAIRLAKRLEKYDPLWFE-------EP-VPPGQEEAIAQVAKHT--SIPIATGERLTTKYEFHKLLQA 273 (412)
T ss_dssp EEECCCSCBCHHHHHHHHHHHGGGCCSEEE-------CC-SCSSCHHHHHHHHHTC--SSCEEECTTCCHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHhhhcCCcEEE-------CC-CChhhHHHHHHHHhhC--CCCEEecCccCCHHHHHHHHHc
Confidence 3333 334666664 45567888774 11 1233578888888876 8999999999999999999998
Q ss_pred C-cCEEEEc
Q 018519 286 G-ASGIFIG 293 (354)
Q Consensus 286 G-Ad~V~ig 293 (354)
| +|.|++-
T Consensus 274 ~a~d~v~~d 282 (412)
T 4e4u_A 274 GGASILQLN 282 (412)
T ss_dssp TCCSEECCC
T ss_pred CCCCEEEeC
Confidence 7 7999884
No 352
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=87.98 E-value=4.4 Score=39.18 Aligned_cols=151 Identities=15% Similarity=0.012 Sum_probs=82.2
Q ss_pred cCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchh--HHhhhccCCCCcCccccccCCc-cCcCcccchhhHHHHHhhhc
Q 018519 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRRE--ADIKNRFTLPPFLTLKNFQGLD-LGKMDEANDSGLAAYVAGQI 208 (354)
Q Consensus 132 ~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~--~~~r~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 208 (354)
..+++.+.+.++++.+.||+++-+.+++|...... .+-+..+. |..-..+.-.... .+.+ ......+.++.+.+.
T Consensus 141 ~~~~e~~~~~a~~~~~~Gf~~~K~k~G~~~~~~~~g~~~~~~~~~-~~~~~~p~~~~~~~~~~~-~~d~~~v~avR~a~G 218 (418)
T 3r4e_A 141 GSDIAETVEAVGHYIDMGYKAIRAQTGVPGIKDAYGVGRGKLYYE-PADASLPSVTGWDTRKAL-NYVPKLFEELRKTYG 218 (418)
T ss_dssp ESSHHHHHHHHHHHHHTTCSEEEEEECCTTC-------------------CCCCEEEECHHHHH-HHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCccccccccccccccccc-cccccccccccccchhHH-HHHHHHHHHHHHHcC
Confidence 46788888888888889999999999876310000 00000000 0000000000000 0000 001112333333331
Q ss_pred -CCccccc--ccCCHHHHH----HHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHH
Q 018519 209 -DRSLSWK--GVLTAEDAR----IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK 281 (354)
Q Consensus 209 -~~~~~w~--Gi~~~~~a~----~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~k 281 (354)
+..+..+ +-.+.++|. .+.+.|++.|- |. ..+..++.+.++++.+ ++||++++-+.+..|+.+
T Consensus 219 ~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~ 288 (418)
T 3r4e_A 219 FDHHLLHDGHHRYTPQEAANLGKMLEPYQLFWLE-------DC-TPAENQEAFRLVRQHT--VTPLAVGEIFNTIWDAKD 288 (418)
T ss_dssp SSSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEE-------SC-SCCSSGGGGHHHHHHC--CSCEEECTTCCSGGGTHH
T ss_pred CCCeEEEeCCCCCCHHHHHHHHHHHHhhCCCEEE-------CC-CCccCHHHHHHHHhcC--CCCEEEcCCcCCHHHHHH
Confidence 2233223 334666654 45667888874 11 1223456677888876 899999999999999999
Q ss_pred HHHcC-cCEEEEcH
Q 018519 282 ALALG-ASGIFIGR 294 (354)
Q Consensus 282 alalG-Ad~V~igr 294 (354)
++..| +|.|++--
T Consensus 289 ~l~~~a~d~v~~k~ 302 (418)
T 3r4e_A 289 LIQNQLIDYIRATV 302 (418)
T ss_dssp HHHTTCCSEECCCT
T ss_pred HHHcCCCCeEecCc
Confidence 99987 79998864
No 353
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=87.97 E-value=1.8 Score=39.80 Aligned_cols=91 Identities=18% Similarity=0.200 Sum_probs=51.5
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcChHH---HHHHHHHHhcCCccEEEcCCCCCHHHHH---H-HHHcCcCEEEE
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIM---ALEEVVKATQGRIPVFLDGGVRRGTDVF---K-ALALGASGIFI 292 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~---~l~~i~~~~~~~i~vi~~GGi~~g~dv~---k-alalGAd~V~i 292 (354)
.+.+..+++.|+|+|++.|+-|-. ...+.-+ .+..+++.+++ -|...|+..+ .+++ + |-.+|||++++
T Consensus 23 ~~lv~~li~~Gv~gl~v~GtTGE~--~~Ls~eEr~~v~~~~~~~~~g--ViaGvg~~~t-~~ai~la~~A~~~Gadavlv 97 (288)
T 2nuw_A 23 KTHAKNLLEKGIDAIFVNGTTGLG--PALSKDEKRQNLNALYDVTHK--LIFQVGSLNL-NDVMELVKFSNEMDILGVSS 97 (288)
T ss_dssp HHHHHHHHHTTCCEEEETSTTTTG--GGSCHHHHHHHHHHHTTTCSC--EEEECCCSCH-HHHHHHHHHHHTSCCSEEEE
T ss_pred HHHHHHHHHcCCCEEEECccccCh--hhCCHHHHHHHHHHHHHHhCC--eEEeeCCCCH-HHHHHHHHHHHhcCCCEEEE
Confidence 355667789999999996654321 1222222 23333333333 3444554443 4443 2 33389999999
Q ss_pred cHHHHHHHhhcCHHHHHHHHHHHHH
Q 018519 293 GRPVVYSLAAEGEKGVRRVLEMLRE 317 (354)
Q Consensus 293 gr~~l~~~~~~G~~gv~~~l~~l~~ 317 (354)
-.|+++. .-.++++.++++.+.+
T Consensus 98 ~~P~y~~--~~s~~~l~~~f~~va~ 120 (288)
T 2nuw_A 98 HSPYYFP--RLPEKFLAKYYEEIAR 120 (288)
T ss_dssp CCCCSSC--SCCHHHHHHHHHHHHH
T ss_pred cCCcCCC--CCCHHHHHHHHHHHHH
Confidence 9998764 0145666666665554
No 354
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=87.89 E-value=1.9 Score=39.14 Aligned_cols=69 Identities=14% Similarity=0.297 Sum_probs=50.7
Q ss_pred CHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEc
Q 018519 219 TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 293 (354)
Q Consensus 219 ~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~ig 293 (354)
++.+..+..++||++|.|-.-. .+=..+.+.|.++++++ ++||+--==|-++-++.+|-++|||+|.+=
T Consensus 65 dp~~iA~~~~~GA~aiSVLTd~----~~F~Gs~~~L~~vr~~v--~lPvLrKDFiid~yQI~eAr~~GADaILLI 133 (258)
T 4a29_A 65 DPIEYAKFMERYAVGLSITTEE----KYFNGSYETLRKIASSV--SIPILMSDFIVKESQIDDAYNLGADTVLLI 133 (258)
T ss_dssp CHHHHHHHHTTTCSEEEEECCS----TTTCCCHHHHHHHHTTC--SSCEEEESCCCSHHHHHHHHHHTCSEEEEE
T ss_pred CHHHHHHHHhCCCeEEEEeCCC----CCCCCCHHHHHHHHHhc--CCCEeeccccccHHHHHHHHHcCCCeeehH
Confidence 4444445678999999884321 11122356788888777 899998877999999999999999999763
No 355
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=87.70 E-value=2.7 Score=40.00 Aligned_cols=42 Identities=24% Similarity=0.386 Sum_probs=34.7
Q ss_pred hHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcH
Q 018519 250 TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 294 (354)
Q Consensus 250 ~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr 294 (354)
.++.+.++++.. ++||++ +|+.+.+++.++..+|||+|.++.
T Consensus 213 ~~~~i~~l~~~~--~~pv~v-K~~~~~e~a~~a~~~Gad~I~vs~ 254 (370)
T 1gox_A 213 SWKDVAWLQTIT--SLPILV-KGVITAEDARLAVQHGAAGIIVSN 254 (370)
T ss_dssp CHHHHHHHHHHC--CSCEEE-ECCCSHHHHHHHHHTTCSEEEECC
T ss_pred hHHHHHHHHHHh--CCCEEE-EecCCHHHHHHHHHcCCCEEEECC
Confidence 456677777766 789986 678999999999999999999953
No 356
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=87.52 E-value=7.1 Score=37.00 Aligned_cols=119 Identities=12% Similarity=0.043 Sum_probs=74.5
Q ss_pred ChHHHHHHHHHHHHc-CCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-CCc
Q 018519 134 DRNVVAQLVRRAERA-GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI-DRS 211 (354)
Q Consensus 134 d~~~~~~~~~~a~~~-G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 211 (354)
+++.+.+.++++.+. |++++-+.++.+.. ..| ...+.++.+... +..
T Consensus 151 ~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~---~~d----------------------------~~~v~avR~~~g~~~~ 199 (372)
T 3tj4_A 151 TLEDLLAGSARAVEEDGFTRLKIKVGHDDP---NID----------------------------IARLTAVRERVDSAVR 199 (372)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEEECCCSSH---HHH----------------------------HHHHHHHHHHSCTTCE
T ss_pred CHHHHHHHHHHHHHccCCCEEEEcCCCCCH---HHH----------------------------HHHHHHHHHHcCCCCc
Confidence 677777777777788 99999999875421 001 111222222221 112
Q ss_pred cccc--ccCCHHHHHHHH----HhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHc
Q 018519 212 LSWK--GVLTAEDARIAV----QAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL 285 (354)
Q Consensus 212 ~~w~--Gi~~~~~a~~~~----~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalal 285 (354)
+..| +-.+.++|.+.. +.|++.|- |. ..+..++.+.++++.. .+||+++..+.+..|+.+++..
T Consensus 200 l~vDan~~~~~~~a~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~ 269 (372)
T 3tj4_A 200 IAIDGNGKWDLPTCQRFCAAAKDLDIYWFE-------EP-LWYDDVTSHARLARNT--SIPIALGEQLYTVDAFRSFIDA 269 (372)
T ss_dssp EEEECTTCCCHHHHHHHHHHTTTSCEEEEE-------SC-SCTTCHHHHHHHHHHC--SSCEEECTTCCSHHHHHHHHHT
T ss_pred EEeeCCCCCCHHHHHHHHHHHhhcCCCEEE-------CC-CCchhHHHHHHHHhhc--CCCEEeCCCccCHHHHHHHHHc
Confidence 2222 334667765443 33444442 11 1233577888888876 7999999999999999999998
Q ss_pred C-cCEEEEc
Q 018519 286 G-ASGIFIG 293 (354)
Q Consensus 286 G-Ad~V~ig 293 (354)
| +|.|++-
T Consensus 270 ~~~d~v~~k 278 (372)
T 3tj4_A 270 GAVAYVQPD 278 (372)
T ss_dssp TCCSEECCC
T ss_pred CCCCEEEeC
Confidence 7 7999884
No 357
>3elf_A Fructose-bisphosphate aldolase; zinc enzyme, dihydroxyacetone, glyceraldehyd phosphate, aldol condensation, glycolysis, lyase; HET: 2FP; 1.31A {Mycobacterium tuberculosis} PDB: 3ekz_A* 3ekl_A* 4a22_A* 4a21_A*
Probab=87.52 E-value=12 Score=35.40 Aligned_cols=114 Identities=13% Similarity=0.136 Sum_probs=75.6
Q ss_pred CCHHHHHHHH-HhC-----CCEEEEec---CCcCCCCCCcChHHHHHHHHHHhc---------CCccEEEcCCCCCHH-H
Q 018519 218 LTAEDARIAV-QAG-----AAGIIVSN---HGARQLDYVPATIMALEEVVKATQ---------GRIPVFLDGGVRRGT-D 278 (354)
Q Consensus 218 ~~~~~a~~~~-~~G-----~d~I~vs~---~gg~~~~~~~~~~~~l~~i~~~~~---------~~i~vi~~GGi~~g~-d 278 (354)
.++|+|.... +.| +|.+-++- ||-+....-.-.++.|.+|.+.++ ..+|++.=||=.++. +
T Consensus 182 T~Peea~~Fv~~tg~~~~gvD~LAvaiGt~HG~Yk~g~p~L~~~~L~~I~~~v~~~~~~~~~~~~vpLVlHGgSG~p~e~ 261 (349)
T 3elf_A 182 TSPEDFEKTIEALGAGEHGKYLLAATFGNVHGVYKPGNVKLRPDILAQGQQVAAAKLGLPADAKPFDFVFHGGSGSLKSE 261 (349)
T ss_dssp CCHHHHHHHHHHHTTSTTSCEEEEECSSCBSSCCCTTSSCCCTHHHHHHHHHHHHHHTCCTTCCCCCEEECCCTTCCHHH
T ss_pred CCHHHHHHHHHHhCCCCCCceEEEEecCCcccCCCCCCCccCHHHHHHHHHHHHhhcCCccccCCCcEEEeCCCCCCHHH
Confidence 5799998865 577 89998863 665421111234678888887762 158999999877765 6
Q ss_pred HHHHHHcCcCEEEEcHHHHHHHh-------hcCHH-------------------HHHHHHHHHHHHHHHHHHHhCCCCh
Q 018519 279 VFKALALGASGIFIGRPVVYSLA-------AEGEK-------------------GVRRVLEMLREEFELAMALSGCRSL 331 (354)
Q Consensus 279 v~kalalGAd~V~igr~~l~~~~-------~~G~~-------------------gv~~~l~~l~~el~~~m~~~G~~~i 331 (354)
+.+++.+|..-|-|++-+-++.. ...++ -+....+.+++-++..|..+|+.+.
T Consensus 262 i~~ai~~GV~KiNi~Tdl~~A~~~~vr~~~~~~~~~~~~~~g~~~n~~~~Dpr~~l~~~~~a~~~~v~~~~~~~gs~~~ 340 (349)
T 3elf_A 262 IEEALRYGVVKMNVDTDTQYAFTRPIAGHMFTNYDGVLKVDGEVGVKKVYDPRSYLKKAEASMSQRVVQACNDLHCAGK 340 (349)
T ss_dssp HHHHHHTTEEEEEECHHHHHHHHHHHHHHHHHTHHHHSCCTTCCCCHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCTTC
T ss_pred HHHHHHcCCEEEEcchHHHHHHHHHHHHHHHhCccccccccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 77899999999999997655432 11111 1122235667777778888877543
No 358
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=87.29 E-value=1.5 Score=42.66 Aligned_cols=102 Identities=13% Similarity=0.085 Sum_probs=58.1
Q ss_pred Cc-eEEEEeecCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHH
Q 018519 123 GI-RFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLA 201 (354)
Q Consensus 123 ~~-~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (354)
.| .++-|-+..+.+.+.+.++.++++|+++|.++=-.. .|. ++...-....+ +.+.. .......-+.
T Consensus 269 ~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~---~r~-dl~~~~~~~GG-----lSG~a---~~p~al~~I~ 336 (415)
T 3i65_A 269 KPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTT---QIN-DIKSFENKKGG-----VSGAK---LKDISTKFIC 336 (415)
T ss_dssp CCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBS---CCC-CCGGGTTCCSE-----EEEGG---GHHHHHHHHH
T ss_pred CCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCc---ccc-cccccccccCC-----cCCcc---chHHHHHHHH
Confidence 45 677776555666788999999999999998752111 111 01000000000 00000 0000111234
Q ss_pred HHHhhh--cCCcccccccCCHHHHHHHHHhCCCEEEE
Q 018519 202 AYVAGQ--IDRSLSWKGVLTAEDARIAVQAGAAGIIV 236 (354)
Q Consensus 202 ~~~~~~--~~~~~~w~Gi~~~~~a~~~~~~G~d~I~v 236 (354)
++.+.+ ..|.+.-.||.+.+||.+++.+|||+|.|
T Consensus 337 ~v~~~v~~~iPIIg~GGI~s~eDa~e~l~aGAd~VqI 373 (415)
T 3i65_A 337 EMYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQL 373 (415)
T ss_dssp HHHHHTTTCSCEEECSSCCSHHHHHHHHHHTEEEEEE
T ss_pred HHHHHhCCCCCEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 444443 34556656899999999999999999998
No 359
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=87.19 E-value=1.8 Score=40.04 Aligned_cols=69 Identities=32% Similarity=0.333 Sum_probs=48.1
Q ss_pred ccCCHHHHHHHHHhCCCEEEEec-------C-CcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCC--HHHHHHHHHc
Q 018519 216 GVLTAEDARIAVQAGAAGIIVSN-------H-GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR--GTDVFKALAL 285 (354)
Q Consensus 216 Gi~~~~~a~~~~~~G~d~I~vs~-------~-gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~--g~dv~kalal 285 (354)
++...+.|+.+.++|+|+|.+-+ . +|. ......+.+.++++.+ ++||++ +++. -.++-.++++
T Consensus 27 ~~~~~~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~---~~~~~~~~i~~I~~~~--~iPv~~--k~r~g~~~~~~~~~a~ 99 (305)
T 2nv1_A 27 DVINAEQAKIAEEAGAVAVMALERVPADIRAAGGV---ARMADPTIVEEVMNAV--SIPVMA--KARIGHIVEARVLEAM 99 (305)
T ss_dssp EESSHHHHHHHHHTTCSEEEECCC-------CCCC---CCCCCHHHHHHHHHHC--SSCEEE--EECTTCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHcCCCEEEEcCCCcchhhhccCc---ccCCCHHHHHHHHHhC--CCCEEe--cccccchHHHHHHHHC
Confidence 34578999999999999994322 1 111 1233467788888776 789885 4555 5666777789
Q ss_pred CcCEEE
Q 018519 286 GASGIF 291 (354)
Q Consensus 286 GAd~V~ 291 (354)
|||+|.
T Consensus 100 GAd~V~ 105 (305)
T 2nv1_A 100 GVDYID 105 (305)
T ss_dssp TCSEEE
T ss_pred CCCEEE
Confidence 999996
No 360
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=87.09 E-value=1.2 Score=40.84 Aligned_cols=72 Identities=19% Similarity=0.212 Sum_probs=52.7
Q ss_pred cCCHHHHHHHHHhCCCEEEEecCCcC--CCCCC---cChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEE
Q 018519 217 VLTAEDARIAVQAGAAGIIVSNHGAR--QLDYV---PATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGI 290 (354)
Q Consensus 217 i~~~~~a~~~~~~G~d~I~vs~~gg~--~~~~~---~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V 290 (354)
+.++|.|+.+.++|+.+|.+--.--. ...+| .++.+.|.+|++++ ++||++==-|..-.++...-++|||.|
T Consensus 18 v~~~eqa~iae~aGa~av~~l~~~p~d~r~~gGv~Rm~dp~~I~~I~~aV--sIPVm~k~righ~~EAqilea~GaD~I 94 (291)
T 3o07_A 18 VVTPEQAKIAEKSGACAVMALESIPADMRKSGKVCRMSDPKMIKDIMNSV--SIPVMAKVRIGHFVEAQIIEALEVDYI 94 (291)
T ss_dssp ESSHHHHHHHHHHTCSEEEECSSCHHHHHTTTCCCCCCCHHHHHHHHTTC--SSCEEEEEETTCHHHHHHHHHTTCSEE
T ss_pred cCCHHHHHHHHHhCchhhhhccCCCchhhhcCCccccCCHHHHHHHHHhC--CCCeEEEEecCcHHHHHHHHHcCCCEE
Confidence 57999999999999999987411000 01122 35677889999888 899998877776556655566999988
No 361
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=87.04 E-value=0.99 Score=44.96 Aligned_cols=70 Identities=19% Similarity=0.153 Sum_probs=50.1
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcH
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 294 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr 294 (354)
.+.+..+.++|++.+.++...|.. ...++.+..+++..++++||+ .|+|.+.+++.++..+|||++.+|.
T Consensus 244 ~e~~~~l~e~gv~~l~Vd~~~g~~----~~~~~~i~~lk~~~~~~~~Vi-~G~V~t~~~a~~l~~aGad~I~Vg~ 313 (503)
T 1me8_A 244 RERVPALVEAGADVLCIDSSDGFS----EWQKITIGWIREKYGDKVKVG-AGNIVDGEGFRYLADAGADFIKIGI 313 (503)
T ss_dssp HHHHHHHHHHTCSEEEECCSCCCS----HHHHHHHHHHHHHHGGGSCEE-EEEECSHHHHHHHHHHTCSEEEECS
T ss_pred HHHHHHHHhhhccceEEecccCcc----cchhhHHHHHHHhCCCCceEe-eccccCHHHHHHHHHhCCCeEEecc
Confidence 455778889999999984332221 124556666666553227777 5889999999999999999998764
No 362
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=86.76 E-value=5.2 Score=38.80 Aligned_cols=147 Identities=12% Similarity=-0.056 Sum_probs=82.7
Q ss_pred cCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccC-----C-CCcCccccccCCc-cCcCcccchhhHHHHH
Q 018519 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFT-----L-PPFLTLKNFQGLD-LGKMDEANDSGLAAYV 204 (354)
Q Consensus 132 ~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~-----~-p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 204 (354)
..+++.+.+.++++.+.||+++-+.++.|..... .+.. . |.....+.-.... .... ......++++.
T Consensus 148 ~~~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~~-----~g~~~~~~~~~~~~~~~p~~~~~d~~~~~-~~d~e~v~avR 221 (425)
T 3vcn_A 148 GETIEDTIAEAVKYKAMGYKAIRLQTGVPGLAST-----YGVSKDKMFYEPADNDLPTENIWSTAKYL-NSVPKLFERAR 221 (425)
T ss_dssp ESSHHHHHHHHHHHHHTTCSEEEEEECCTTCSCC-----TTCSSCSSCCCCCCBSSCCEEEECHHHHH-TTTHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeecCcccccc-----ccccccccccCcccccccccccccchhHH-HHHHHHHHHHH
Confidence 3678888888888888999999999886421000 0000 0 0000000000000 0000 00112233443
Q ss_pred hhhc-CCccccc--ccCCHHHHH----HHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHH
Q 018519 205 AGQI-DRSLSWK--GVLTAEDAR----IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT 277 (354)
Q Consensus 205 ~~~~-~~~~~w~--Gi~~~~~a~----~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~ 277 (354)
+.+. +..+..+ +-.+.++|. .+.+.|++.|-- . ..+..++.+.++++.+ ++||++++.+.+..
T Consensus 222 ~a~G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEq-------P-~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~ 291 (425)
T 3vcn_A 222 EVLGWDVHLLHDVHHRLTPIEAARLGKDLEPYRLFWLED-------S-VPAENQAGFRLIRQHT--TTPLAVGEIFAHVW 291 (425)
T ss_dssp HHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEEC-------C-SCCSSTTHHHHHHHHC--CSCEEECTTCCSGG
T ss_pred HHcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEEC-------C-CChhhHHHHHHHHhcC--CCCEEeCCCcCCHH
Confidence 3332 2233333 335666664 456778888741 1 1123456778888877 89999999999999
Q ss_pred HHHHHHHcC-cCEEEEcH
Q 018519 278 DVFKALALG-ASGIFIGR 294 (354)
Q Consensus 278 dv~kalalG-Ad~V~igr 294 (354)
|+.+++..| +|.|++--
T Consensus 292 ~~~~~i~~~a~d~v~~k~ 309 (425)
T 3vcn_A 292 DAKQLIEEQLIDYLRATV 309 (425)
T ss_dssp GTHHHHHTTCCSEECCCT
T ss_pred HHHHHHHcCCCCeEecCh
Confidence 999999987 79998864
No 363
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=86.76 E-value=2.3 Score=40.40 Aligned_cols=43 Identities=23% Similarity=0.336 Sum_probs=36.8
Q ss_pred cChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEc
Q 018519 248 PATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 293 (354)
Q Consensus 248 ~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~ig 293 (354)
..+|+.+..+++.. ++||++=| +.+.+|+.++..+|||+|.+.
T Consensus 203 ~~~w~~i~~lr~~~--~~PvivK~-v~~~e~A~~a~~~GaD~I~vs 245 (352)
T 3sgz_A 203 SFCWNDLSLLQSIT--RLPIILKG-ILTKEDAELAMKHNVQGIVVS 245 (352)
T ss_dssp TCCHHHHHHHHHHC--CSCEEEEE-ECSHHHHHHHHHTTCSEEEEC
T ss_pred CCCHHHHHHHHHhc--CCCEEEEe-cCcHHHHHHHHHcCCCEEEEe
Confidence 35688899988876 78998875 789999999999999999983
No 364
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=86.68 E-value=7.1 Score=37.43 Aligned_cols=144 Identities=12% Similarity=-0.071 Sum_probs=80.8
Q ss_pred cCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCcc-CcCcccchhhHHHHHhhhc-C
Q 018519 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDL-GKMDEANDSGLAAYVAGQI-D 209 (354)
Q Consensus 132 ~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~ 209 (354)
..+++.+.+.++++.+.||+++-+.++.+... . +. ..-|.+.... ..+.. ..+ ......+.++.+.+. +
T Consensus 131 ~~~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~-~--~~---~~~~~~~~~g--~~~~~~~~~-~~d~~~v~avR~a~G~d 201 (401)
T 3sbf_A 131 SDTMEGIYDLVEGFLEKGYKHIRCQLGFYGGV-P--TD---LHTTQNPTEG--SYYDQDQYM-DNTLTMFKSLREKYGNQ 201 (401)
T ss_dssp ESSHHHHHHHHHHHHHTTCCEEEEEESCCCSC-G--GG---SCCCSSCCSS--EECCHHHHH-HHHHHHHHHHHHHHTTS
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeeccCCcc-c--cc---cccccccccc--ccccchHHH-HHHHHHHHHHHHHcCCC
Confidence 46788888888888889999999998764210 0 00 0000000000 00000 000 000111233333321 2
Q ss_pred Cccccc--ccCCHHHHH----HHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHH
Q 018519 210 RSLSWK--GVLTAEDAR----IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKAL 283 (354)
Q Consensus 210 ~~~~w~--Gi~~~~~a~----~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kal 283 (354)
..+..+ +-.+.++|. .+.+.|++.|- |. ..+..++.+.++++.+ .+||++++.+.+..|+.+++
T Consensus 202 ~~l~vDan~~~~~~~A~~~~~~L~~~~i~~iE-------qP-~~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i 271 (401)
T 3sbf_A 202 FHILHDVHERLFPNQAIQFAKEVEQYKPYFIE-------DI-LPPNQTEWLDNIRSQS--SVSLGLGELFNNPEEWKSLI 271 (401)
T ss_dssp SEEEEECTTCSCHHHHHHHHHHHGGGCCSCEE-------CS-SCTTCGGGHHHHHTTC--CCCEEECTTCCSHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhcCCCEEE-------CC-CChhHHHHHHHHHhhC--CCCEEeCCccCCHHHHHHHH
Confidence 233333 334666664 44567887774 11 1122456677777765 79999999999999999999
Q ss_pred HcC-cCEEEEcH
Q 018519 284 ALG-ASGIFIGR 294 (354)
Q Consensus 284 alG-Ad~V~igr 294 (354)
..| +|.|++--
T Consensus 272 ~~~~~d~v~~k~ 283 (401)
T 3sbf_A 272 ANRRIDFIRCHV 283 (401)
T ss_dssp HTTCCSEECCCG
T ss_pred hcCCCCEEecCc
Confidence 987 79998864
No 365
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=86.63 E-value=1.6 Score=41.46 Aligned_cols=105 Identities=20% Similarity=0.143 Sum_probs=56.1
Q ss_pred hCCCceEEEEeecCChHHHHHHHHHHHHcC-CCEEEEe--------cCCCCCCchhHHhhhccCCCCcCccccccCCccC
Q 018519 120 TGPGIRFFQLYVYKDRNVVAQLVRRAERAG-FKAIALT--------VDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLG 190 (354)
Q Consensus 120 ~~~~~~~~QLy~~~d~~~~~~~~~~a~~~G-~~ai~i~--------vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~ 190 (354)
....|.++-|-+..|.+.+.+.++.++++| +++|.++ +|.- +.+ ..+... ....++..+
T Consensus 191 ~~~~PV~vKi~p~~d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~--~~~-------~~~~~~---~~~gGlSG~ 258 (354)
T 4ef8_A 191 VYPHSFGVKMPPYFDFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAE--TES-------VVIKPK---QGFGGLGGR 258 (354)
T ss_dssp HCCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETT--TTE-------ESCSGG---GGEEEEEGG
T ss_pred hhCCCeEEEecCCCCHHHHHHHHHHHHhCCCccEEEEecccCcceeeecc--CCc-------cccccc---cccCCCCCC
Confidence 344678888866567666777777777887 9988752 1110 000 000000 000011100
Q ss_pred cCcccchhhHHHHHhhh-cCCcccccccCCHHHHHHHHHhCCCEEEE
Q 018519 191 KMDEANDSGLAAYVAGQ-IDRSLSWKGVLTAEDARIAVQAGAAGIIV 236 (354)
Q Consensus 191 ~~~~~~~~~~~~~~~~~-~~~~~~w~Gi~~~~~a~~~~~~G~d~I~v 236 (354)
........-+.++.+.. ..|.+.-.||.+.+|+.+++.+|||+|.|
T Consensus 259 ~i~p~a~~~i~~v~~~~~~ipII~~GGI~s~~da~~~l~aGAd~V~v 305 (354)
T 4ef8_A 259 YVLPTALANINAFYRRCPGKLIFGCGGVYTGEDAFLHVLAGASMVQV 305 (354)
T ss_dssp GGHHHHHHHHHHHHHHCTTSEEEEESCCCSHHHHHHHHHHTEEEEEE
T ss_pred CCchHHHHHHHHHHHhCCCCCEEEECCcCCHHHHHHHHHcCCCEEEE
Confidence 00000111233343332 23444545899999999999999999998
No 366
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=86.27 E-value=5.8 Score=37.99 Aligned_cols=118 Identities=14% Similarity=0.018 Sum_probs=75.9
Q ss_pred ChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-CCcc
Q 018519 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI-DRSL 212 (354)
Q Consensus 134 d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 212 (354)
+++.+.+.++++.+.||+++-+.++... ..| ...+.++.+.+. +..+
T Consensus 155 ~~e~~~~~a~~~~~~G~~~iKlK~g~~~----~~d----------------------------~~~v~avR~a~g~~~~l 202 (392)
T 3ddm_A 155 NPENPEDVVARKAAEGYRAFKLKVGFDD----ARD----------------------------VRNALHVRELLGAATPL 202 (392)
T ss_dssp CSSSHHHHHHHHHHHTCCCEEEECSSCH----HHH----------------------------HHHHHHHHHHHCSSSCE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCH----HHH----------------------------HHHHHHHHHhcCCCceE
Confidence 4566777888888899999999876411 111 111222222221 1223
Q ss_pred ccc--ccCCHHHHH----HHHHhCCCEEEEecCCcCCCCCCcCh-HHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHc
Q 018519 213 SWK--GVLTAEDAR----IAVQAGAAGIIVSNHGARQLDYVPAT-IMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL 285 (354)
Q Consensus 213 ~w~--Gi~~~~~a~----~~~~~G~d~I~vs~~gg~~~~~~~~~-~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalal 285 (354)
..| +-.+.++|. .+.+.|++.|- |. ..+.. ++.+.++++.. .+||++++.+.+..|+.+++..
T Consensus 203 ~vDaN~~~~~~~A~~~~~~L~~~~i~~iE-------eP-~~~~d~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~ 272 (392)
T 3ddm_A 203 MADANQGWDLPRARQMAQRLGPAQLDWLE-------EP-LRADRPAAEWAELAQAA--PMPLAGGENIAGVAAFETALAA 272 (392)
T ss_dssp EEECTTCCCHHHHHHHHHHHGGGCCSEEE-------CC-SCTTSCHHHHHHHHHHC--SSCEEECTTCCSHHHHHHHHHH
T ss_pred EEeCCCCCCHHHHHHHHHHHHHhCCCEEE-------CC-CCccchHHHHHHHHHhc--CCCEEeCCCCCCHHHHHHHHHc
Confidence 222 224566654 45567888774 11 12234 77888888876 7999999999999999999997
Q ss_pred C-cCEEEEc
Q 018519 286 G-ASGIFIG 293 (354)
Q Consensus 286 G-Ad~V~ig 293 (354)
| +|.|++-
T Consensus 273 ~a~d~v~~k 281 (392)
T 3ddm_A 273 RSLRVMQPD 281 (392)
T ss_dssp TCEEEECCC
T ss_pred CCCCEEEeC
Confidence 7 7888884
No 367
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=86.24 E-value=20 Score=32.86 Aligned_cols=183 Identities=16% Similarity=0.184 Sum_probs=98.4
Q ss_pred ceEecccccccccCChhhHHHHHHHHHcCCcEEe--cCC---CCCCHHHHHh-------h-CC-CceEEEEeecCChHHH
Q 018519 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--SSW---STSSVEEVAS-------T-GP-GIRFFQLYVYKDRNVV 138 (354)
Q Consensus 73 Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~--s~~---~~~~~eei~~-------~-~~-~~~~~QLy~~~d~~~~ 138 (354)
|-++.|+.-..-.+.++-..+.+-..+.|+...+ ++. .+.+.||-.+ . .+ -+.+...- ..+....
T Consensus 18 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg-~~~t~~a 96 (301)
T 1xky_A 18 TAMVTPFDINGNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTG-SNNTHAS 96 (301)
T ss_dssp EECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSCHHHH
T ss_pred EeeECcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCC-CCCHHHH
Confidence 4455666322212222223556666678875543 332 3456665322 1 22 45666653 4577778
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCccccc---
Q 018519 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWK--- 215 (354)
Q Consensus 139 ~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~--- 215 (354)
.++++.|+++|++++.+.. |.. .-| +.. ....-++++.+....|.+...
T Consensus 97 i~la~~A~~~Gadavlv~~--P~y-----------~~~---s~~------------~l~~~f~~va~a~~lPiilYn~P~ 148 (301)
T 1xky_A 97 IDLTKKATEVGVDAVMLVA--PYY-----------NKP---SQE------------GMYQHFKAIAESTPLPVMLYNVPG 148 (301)
T ss_dssp HHHHHHHHHTTCSEEEEEC--CCS-----------SCC---CHH------------HHHHHHHHHHHTCSSCEEEEECHH
T ss_pred HHHHHHHHhcCCCEEEEcC--CCC-----------CCC---CHH------------HHHHHHHHHHHhcCCCEEEEeCcc
Confidence 8899999999999988752 421 101 000 001113334444444444433
Q ss_pred --cc-CCHHHHHHHHHhCCCEEE-EecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEE
Q 018519 216 --GV-LTAEDARIAVQAGAAGII-VSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIF 291 (354)
Q Consensus 216 --Gi-~~~~~a~~~~~~G~d~I~-vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~ 291 (354)
|+ ++++...++.+. ..|+ + .+. ..++..+.++.+..+++..| .+|. -.-++.++++|++++.
T Consensus 149 ~tg~~l~~~~~~~La~~--pnIvgi-------Kds-sgd~~~~~~~~~~~~~~f~v-~~G~---d~~~l~~l~~G~~G~i 214 (301)
T 1xky_A 149 RSIVQISVDTVVRLSEI--ENIVAI-------KDA-GGDVLTMTEIIEKTADDFAV-YSGD---DGLTLPAMAVGAKGIV 214 (301)
T ss_dssp HHSSCCCHHHHHHHHTS--TTEEEE-------EEC-SSCHHHHHHHHHHSCTTCEE-EESS---GGGHHHHHHTTCCEEE
T ss_pred ccCCCCCHHHHHHHHcC--CCEEEE-------EcC-CCCHHHHHHHHHhcCCCeEE-EECc---HHHHHHHHHcCCCEEE
Confidence 54 688888887653 3332 2 011 11345566666665445544 4553 2347788999999999
Q ss_pred EcHHHHH
Q 018519 292 IGRPVVY 298 (354)
Q Consensus 292 igr~~l~ 298 (354)
-+..-++
T Consensus 215 s~~an~~ 221 (301)
T 1xky_A 215 SVASHVI 221 (301)
T ss_dssp ESTHHHH
T ss_pred cCHHHhC
Confidence 8875443
No 368
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=86.19 E-value=4.9 Score=35.41 Aligned_cols=87 Identities=18% Similarity=0.141 Sum_probs=51.7
Q ss_pred HhhCCCceEEEE---eecCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcc
Q 018519 118 ASTGPGIRFFQL---YVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDE 194 (354)
Q Consensus 118 ~~~~~~~~~~QL---y~~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~ 194 (354)
++..+ |.++.+ -...+.+...+..+.++++|+++|..+.+ +. +.+.+
T Consensus 112 ~~a~~-pv~vKvi~e~~~l~~~~~~~~a~~a~eaGad~I~tstg--------------~~-~gga~-------------- 161 (225)
T 1mzh_A 112 FRETP-SAVHKVIVETPYLNEEEIKKAVEICIEAGADFIKTSTG--------------FA-PRGTT-------------- 161 (225)
T ss_dssp HHTCT-TSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEECCCS--------------CS-SSCCC--------------
T ss_pred HHHhc-CceEEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEECCC--------------CC-CCCCC--------------
Confidence 33443 566766 22345666788889999999999943321 11 11100
Q ss_pred cchhhHHHHHhhh--cCCcccccccCCHHHHHHHHHhCCCEEEE
Q 018519 195 ANDSGLAAYVAGQ--IDRSLSWKGVLTAEDARIAVQAGAAGIIV 236 (354)
Q Consensus 195 ~~~~~~~~~~~~~--~~~~~~w~Gi~~~~~a~~~~~~G~d~I~v 236 (354)
...+..+.+.. ..|.+.-.||.+.+++...+++|||.|-+
T Consensus 162 --~~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l~aGA~~iG~ 203 (225)
T 1mzh_A 162 --LEEVRLIKSSAKGRIKVKASGGIRDLETAISMIEAGADRIGT 203 (225)
T ss_dssp --HHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred --HHHHHHHHHHhCCCCcEEEECCCCCHHHHHHHHHhCchHHHH
Confidence 11123333322 23444444899999999999999997644
No 369
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=86.07 E-value=1.7 Score=40.09 Aligned_cols=110 Identities=17% Similarity=0.088 Sum_probs=57.3
Q ss_pred CCceEEEEeecCChHHHHHHHHHHHHcC-CCEEEEecCCCCCCchhHHh-hhccCCCCcCccccccCCccCcCcccchhh
Q 018519 122 PGIRFFQLYVYKDRNVVAQLVRRAERAG-FKAIALTVDTPRLGRREADI-KNRFTLPPFLTLKNFQGLDLGKMDEANDSG 199 (354)
Q Consensus 122 ~~~~~~QLy~~~d~~~~~~~~~~a~~~G-~~ai~i~vd~p~~g~r~~~~-r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 199 (354)
.-|.++-+....+.+.+.+.++.++++| +++|.++--.. .+... +. +....++.. ....++............
T Consensus 160 ~~Pv~vK~~~~~~~~~~~~~a~~~~~aG~~d~i~v~~~~~-~~~~i-~~~~~~~~~~~~---~~~gG~sg~~~~p~~~~~ 234 (314)
T 2e6f_A 160 GLPFGVKMPPYFDIAHFDTAAAVLNEFPLVKFVTCVNSVG-NGLVI-DAESESVVIKPK---QGFGGLGGKYILPTALAN 234 (314)
T ss_dssp CSCEEEEECCCCCHHHHHHHHHHHHTCTTEEEEEECCCEE-EEECE-ETTTTEESCCGG---GGEEEEESGGGHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHhcCCceEEEEeCCCC-ccccc-cCCCCCcccccC---cCCCccCcccccHHHHHH
Confidence 3467887776557777778889999999 99988652110 00000 00 000000000 000000000000000112
Q ss_pred HHHHHhhh-cCCcccccccCCHHHHHHHHHhCCCEEEE
Q 018519 200 LAAYVAGQ-IDRSLSWKGVLTAEDARIAVQAGAAGIIV 236 (354)
Q Consensus 200 ~~~~~~~~-~~~~~~w~Gi~~~~~a~~~~~~G~d~I~v 236 (354)
+.++.+.. ..|.+.-.||.+.+++.+++.+|||+|.+
T Consensus 235 i~~v~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~i 272 (314)
T 2e6f_A 235 VNAFYRRCPDKLVFGCGGVYSGEDAFLHILAGASMVQV 272 (314)
T ss_dssp HHHHHHHCTTSEEEEESSCCSHHHHHHHHHHTCSSEEE
T ss_pred HHHHHHhcCCCCEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 33344433 34444545899999999999999999998
No 370
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=86.06 E-value=0.92 Score=41.67 Aligned_cols=91 Identities=20% Similarity=0.131 Sum_probs=55.1
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHH----HHHcCcCEEEEcHHH
Q 018519 221 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPV 296 (354)
Q Consensus 221 ~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~k----alalGAd~V~igr~~ 296 (354)
+.+..+++. +|+|++.|+-|- ....+ .+.-.++.+.+..++|||+--|=.+-.++++ |-.+|||++++-.|+
T Consensus 23 ~lv~~li~~-v~gl~v~GttGE--~~~Ls-~~Er~~v~~~~~~rvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 98 (283)
T 2pcq_A 23 ELAQALEPL-VDGLLVYGSNGE--GVHLT-PEERARGLRALRPRKPFLVGLMEETLPQAEGALLEAKAAGAMALLATPPR 98 (283)
T ss_dssp HHHHHHGGG-SSCCEETCTTTT--GGGSC-HHHHHHHHHTCCCSSCCEEEECCSSHHHHHHHHHHHHHHTCSEEEECCCC
T ss_pred HHHHHHHhh-CCEEEECCcCcC--chhcC-HHHHHHHHHHHHhCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEecCCc
Confidence 455566788 999999665431 11222 2333344444323788876555444455543 344899999999998
Q ss_pred HHHHhhcCHHHHHHHHHHHHH
Q 018519 297 VYSLAAEGEKGVRRVLEMLRE 317 (354)
Q Consensus 297 l~~~~~~G~~gv~~~l~~l~~ 317 (354)
++... .++++.++++.+.+
T Consensus 99 y~~~~--~~~~l~~~f~~va~ 117 (283)
T 2pcq_A 99 YYHGS--LGAGLLRYYEALAE 117 (283)
T ss_dssp TTGGG--TTTHHHHHHHHHHH
T ss_pred CCCCC--CHHHHHHHHHHHhc
Confidence 77531 35677777766655
No 371
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=86.01 E-value=1.7 Score=40.10 Aligned_cols=188 Identities=19% Similarity=0.164 Sum_probs=104.8
Q ss_pred eEecccccccccCChhhHHHHHHHHHcCCcEEecCCC-------------CCCHHHHHh-------hCCCceEEEE-eec
Q 018519 74 IMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWS-------------TSSVEEVAS-------TGPGIRFFQL-YVY 132 (354)
Q Consensus 74 i~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~s~~~-------------~~~~eei~~-------~~~~~~~~QL-y~~ 132 (354)
.++.|.++ |...|+.+.++|...++.+.+ ..+++|+.. ..+.|...=+ +.+
T Consensus 22 ~i~~~~a~--------D~~sA~i~e~aGf~ai~vs~s~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~Gy 93 (287)
T 3b8i_A 22 CYHTASVF--------DPMSARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVARLPVIADADHGY 93 (287)
T ss_dssp CEECEECC--------SHHHHHHHHHTTCSCEEECHHHHHHHHHSCCSSSCSCHHHHHHHHHHHHTTCSSCEEEECTTCS
T ss_pred cEEEecCC--------CHHHHHHHHHcCCCEEEeCcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 45566655 458999999999876553211 135555532 2233322211 112
Q ss_pred CChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCcc
Q 018519 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (354)
Q Consensus 133 ~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (354)
.+++...+.+++.+++|+.++-|- |... .+| .+.. +. + +.. .+.....++..++....+.+
T Consensus 94 g~~~~~~~~v~~l~~aGa~gv~iE-D~~~-pKr-----cgh~-~g----k-l~~------~~e~~~~I~aa~~a~~~~~~ 154 (287)
T 3b8i_A 94 GNALNVMRTVVELERAGIAALTIE-DTLL-PAQ-----FGRK-ST----D-LIC------VEEGVGKIRAALEARVDPAL 154 (287)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEE-CBCC-SCC-----TTTC-TT----C-BCC------HHHHHHHHHHHHHHCCSTTS
T ss_pred CCHHHHHHHHHHHHHhCCeEEEEc-CCCC-ccc-----cCCC-CC----C-ccC------HHHHHHHHHHHHHcCCCCCc
Confidence 377777888899999999998775 2211 111 1110 00 0 100 00112234444443222322
Q ss_pred ccc--------cc-CCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEc-CCCCCHHHHHHH
Q 018519 213 SWK--------GV-LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD-GGVRRGTDVFKA 282 (354)
Q Consensus 213 ~w~--------Gi-~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~-GGi~~g~dv~ka 282 (354)
... |+ -..++|+...++|||+|++ + ++++.+.+.++.+.+ ++|++.. +|-...-+..+.
T Consensus 155 ~i~aRtdaa~~gl~~ai~Ra~ay~eAGAd~i~~--e-------~~~~~~~~~~i~~~~--~~P~ii~~~g~~~~~~~~eL 223 (287)
T 3b8i_A 155 TIIARTNAELIDVDAVIQRTLAYQEAGADGICL--V-------GVRDFAHLEAIAEHL--HIPLMLVTYGNPQLRDDARL 223 (287)
T ss_dssp EEEEEEETTTSCHHHHHHHHHHHHHTTCSEEEE--E-------CCCSHHHHHHHHTTC--CSCEEEECTTCGGGCCHHHH
T ss_pred EEEEechhhhcCHHHHHHHHHHHHHcCCCEEEe--c-------CCCCHHHHHHHHHhC--CCCEEEeCCCCCCCCCHHHH
Confidence 111 11 1456778899999999999 3 256677888888887 6887743 332222334444
Q ss_pred HHcCcCEEEEcHHHHHH
Q 018519 283 LALGASGIFIGRPVVYS 299 (354)
Q Consensus 283 lalGAd~V~igr~~l~~ 299 (354)
-.+|.+.|..|...+++
T Consensus 224 ~~lGv~~v~~~~~~~ra 240 (287)
T 3b8i_A 224 ARLGVRVVVNGHAAYFA 240 (287)
T ss_dssp HHTTEEEEECCCHHHHH
T ss_pred HHcCCcEEEEChHHHHH
Confidence 56999999999877664
No 372
>3qm3_A Fructose-bisphosphate aldolase; structural genomics, center for structural genomics of infec diseases, csgid, TIM beta/alpha-barrel, lyase; 1.85A {Campylobacter jejuni} SCOP: c.1.10.2
Probab=85.68 E-value=10 Score=35.90 Aligned_cols=82 Identities=22% Similarity=0.259 Sum_probs=56.6
Q ss_pred CCHHHHHHHHH-hC----CCEEEEec---CCcCCCCCCcChHHHHHHHHHHhc--------CCccEEEcCCCCCHH-HHH
Q 018519 218 LTAEDARIAVQ-AG----AAGIIVSN---HGARQLDYVPATIMALEEVVKATQ--------GRIPVFLDGGVRRGT-DVF 280 (354)
Q Consensus 218 ~~~~~a~~~~~-~G----~d~I~vs~---~gg~~~~~~~~~~~~l~~i~~~~~--------~~i~vi~~GGi~~g~-dv~ 280 (354)
++|++|....+ .| +|.+-++- ||-+....-.-.++.|.+|.+.++ .++|++.=||=.++. ++.
T Consensus 195 T~Peea~~Fv~~tg~~~gvD~LAvaiGt~HG~Yk~g~p~L~~~~L~~i~~~i~~~~~~~~~~~vpLVlHGgSG~p~e~i~ 274 (357)
T 3qm3_A 195 TQPEDVALAYERLGKISDKFSIAASFGNVHGVYKPGNVSLQPEILKNSQKFVKDKFALNSDKPINFVFHGGSGSELKDIK 274 (357)
T ss_dssp CCHHHHHHHHHHHTTTCSCEEEECCSSCCCSSCCSSCCCCCTHHHHHHHHHHHHHTTCSCSCCSCEEECSCTTCCHHHHH
T ss_pred CCHHHHHHHHHHhCCCCcccEEEEecCCccCCcCCCCCCCCHHHHHHHHHHHHHHhccccCCCCcEEEeCCCCCCHHHHH
Confidence 57999998876 34 56777753 665421111235677887766431 168999998876665 677
Q ss_pred HHHHcCcCEEEEcHHHHHH
Q 018519 281 KALALGASGIFIGRPVVYS 299 (354)
Q Consensus 281 kalalGAd~V~igr~~l~~ 299 (354)
|++.+|..-|-|++-+-++
T Consensus 275 ~ai~~GV~KiNi~Tdl~~A 293 (357)
T 3qm3_A 275 NAVSYGVIKMNIDTDTQWA 293 (357)
T ss_dssp HHHHTTEEEEEECHHHHHH
T ss_pred HHHHCCceEEEechHHHHH
Confidence 8999999999999976554
No 373
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=85.60 E-value=21 Score=32.51 Aligned_cols=179 Identities=13% Similarity=0.095 Sum_probs=97.7
Q ss_pred ceEecccccccccCChhhHHHHHHHHHcCCcEEe--c---CCCCCCHHHHHh-------h-CC-CceEEEEeecCChHHH
Q 018519 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--S---SWSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNVV 138 (354)
Q Consensus 73 Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~--s---~~~~~~~eei~~-------~-~~-~~~~~QLy~~~d~~~~ 138 (354)
|.++.|+ -..-.+.++-..+.+-..+.|+...+ + +..+.+.||-.+ . .. -+.+...- ..+....
T Consensus 7 ~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~a 84 (292)
T 2vc6_A 7 TALVTPF-ADDRIDEVALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAG-SNSTAEA 84 (292)
T ss_dssp EECCCCE-ETTEECHHHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHHH
T ss_pred EeeecCc-CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CccHHHH
Confidence 4445565 22222333334566666678876554 2 233456665422 1 22 45666653 4577778
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCccccc---
Q 018519 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWK--- 215 (354)
Q Consensus 139 ~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~--- 215 (354)
.++.+.|+++|++++.+.. |.. .-| +.. ....-++++.+....|.+...
T Consensus 85 i~la~~A~~~Gadavlv~~--P~y-----------~~~---s~~------------~l~~~f~~ia~a~~lPiilYn~P~ 136 (292)
T 2vc6_A 85 IAFVRHAQNAGADGVLIVS--PYY-----------NKP---TQE------------GIYQHFKAIDAASTIPIIVYNIPG 136 (292)
T ss_dssp HHHHHHHHHTTCSEEEEEC--CCS-----------SCC---CHH------------HHHHHHHHHHHHCSSCEEEEECHH
T ss_pred HHHHHHHHHcCCCEEEEcC--CCC-----------CCC---CHH------------HHHHHHHHHHHhCCCCEEEEeCcc
Confidence 8899999999999988753 321 101 000 001113334444444544433
Q ss_pred --cc-CCHHHHHHHHH-h-CCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEE
Q 018519 216 --GV-LTAEDARIAVQ-A-GAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGI 290 (354)
Q Consensus 216 --Gi-~~~~~a~~~~~-~-G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V 290 (354)
|+ ++++...++.+ . .+-+|.-+ . .++..+.++.+..+++..|+ +|. -.-++.++++||+++
T Consensus 137 ~tg~~l~~~~~~~La~~~pnIvgiK~s--~--------gd~~~~~~~~~~~~~~f~v~-~G~---d~~~~~~l~~G~~G~ 202 (292)
T 2vc6_A 137 RSAIEIHVETLARIFEDCPNVKGVXDA--T--------GNLLRPSLERMACGEDFNLL-TGE---DGTALGYMAHGGHGC 202 (292)
T ss_dssp HHSCCCCHHHHHHHHHHCTTEEEEEEC--S--------CCTHHHHHHHHHSCTTSEEE-ESC---GGGHHHHHHTTCCEE
T ss_pred ccCcCCCHHHHHHHHhhCCCEEEEecC--C--------CCHHHHHHHHHHcCCCEEEE-ECc---hHHHHHHHHcCCCEE
Confidence 64 68888888776 3 23333321 1 12344556666555566554 552 345778899999999
Q ss_pred EEcHH
Q 018519 291 FIGRP 295 (354)
Q Consensus 291 ~igr~ 295 (354)
.-+..
T Consensus 203 is~~~ 207 (292)
T 2vc6_A 203 ISVTA 207 (292)
T ss_dssp EESGG
T ss_pred EecHH
Confidence 88873
No 374
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=85.56 E-value=5.9 Score=37.35 Aligned_cols=116 Identities=16% Similarity=0.167 Sum_probs=74.1
Q ss_pred CChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc----
Q 018519 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI---- 208 (354)
Q Consensus 133 ~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 208 (354)
.+++.+.+.++++.+.||+++-++++ |.. + ...+.++.+...
T Consensus 140 ~~~~~~~~~a~~~~~~G~~~iKik~~-~~~-----d----------------------------~~~v~avr~a~~~~~l 185 (369)
T 2zc8_A 140 PSVEDTLRVVERHLEEGYRRIKLKIK-PGW-----D----------------------------YEVLKAVREAFPEATL 185 (369)
T ss_dssp SSHHHHHHHHHHHHHTTCSCEEEECB-TTB-----S----------------------------HHHHHHHHHHCTTSCE
T ss_pred CCHHHHHHHHHHHHHhhhheeeeecC-hhH-----H----------------------------HHHHHHHHHHcCCCeE
Confidence 36777778888888899999998873 210 0 001111111110
Q ss_pred --CCcccccccCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcC
Q 018519 209 --DRSLSWKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG 286 (354)
Q Consensus 209 --~~~~~w~Gi~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalG 286 (354)
+..-.|+--. .+.++.+.+.|++.|- |. ..+..++.+.++++.. ++||+++.-+.+..|+.+++..|
T Consensus 186 ~vDan~~~~~~~-~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i~~~ 254 (369)
T 2zc8_A 186 TADANSAYSLAN-LAQLKRLDELRLDYIE-------QP-LAYDDLLDHAKLQREL--STPICLDESLTGAEKARKAIELG 254 (369)
T ss_dssp EEECTTCCCGGG-HHHHHGGGGGCCSCEE-------CC-SCTTCSHHHHHHHHHC--SSCEEESTTCCSHHHHHHHHHHT
T ss_pred EEecCCCCCHHH-HHHHHHHHhCCCcEEE-------CC-CCcccHHHHHHHHhhC--CCCEEEcCccCCHHHHHHHHHhC
Confidence 1112333212 4555556677777775 11 1233467778888776 79999999999999999999988
Q ss_pred -cCEEEEc
Q 018519 287 -ASGIFIG 293 (354)
Q Consensus 287 -Ad~V~ig 293 (354)
+|.|++-
T Consensus 255 ~~d~v~ik 262 (369)
T 2zc8_A 255 AGRVFNVK 262 (369)
T ss_dssp CCSEEEEC
T ss_pred CCCEEEEc
Confidence 8999984
No 375
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=85.52 E-value=2.4 Score=40.48 Aligned_cols=42 Identities=31% Similarity=0.568 Sum_probs=35.3
Q ss_pred ChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEc
Q 018519 249 ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 293 (354)
Q Consensus 249 ~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~ig 293 (354)
.+++.+..+++.. ++||++=| +.+.+|+.++..+|||+|.+.
T Consensus 216 ~~~~~i~~lr~~~--~~PvivK~-v~~~e~a~~a~~~Gad~I~vs 257 (368)
T 2nli_A 216 ISPRDIEEIAGHS--GLPVFVKG-IQHPEDADMAIKRGASGIWVS 257 (368)
T ss_dssp CCHHHHHHHHHHS--SSCEEEEE-ECSHHHHHHHHHTTCSEEEEC
T ss_pred hhHHHHHHHHHHc--CCCEEEEc-CCCHHHHHHHHHcCCCEEEEc
Confidence 3567788888876 78998874 789999999999999999994
No 376
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=85.48 E-value=10 Score=36.49 Aligned_cols=65 Identities=6% Similarity=-0.124 Sum_probs=50.5
Q ss_pred CCHHHHHH----HHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcC-cCEEEE
Q 018519 218 LTAEDARI----AVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFI 292 (354)
Q Consensus 218 ~~~~~a~~----~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalG-Ad~V~i 292 (354)
.+.++|.+ +.+.|++.|-. . ...++.+.++++.+ ++||++++.+.+..|+.+++..| +|.|++
T Consensus 224 ~~~~~A~~~~~~L~~~~i~~iE~-------P---~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~ 291 (409)
T 3go2_A 224 AKPEGYLKILRELADFDLFWVEI-------D---SYSPQGLAYVRNHS--PHPISSCETLFGIREFKPFFDANAVDVAIV 291 (409)
T ss_dssp SCHHHHHHHHHHTTTSCCSEEEC-------C---CSCHHHHHHHHHTC--SSCEEECTTCCHHHHHHHHHHTTCCSEEEE
T ss_pred CCHHHHHHHHHHHhhcCCeEEEe-------C---cCCHHHHHHHHhhC--CCCEEeCCCcCCHHHHHHHHHhCCCCEEEe
Confidence 56676654 45568888763 1 13677788888876 79999999999999999999987 799988
Q ss_pred cH
Q 018519 293 GR 294 (354)
Q Consensus 293 gr 294 (354)
--
T Consensus 292 k~ 293 (409)
T 3go2_A 292 DT 293 (409)
T ss_dssp CH
T ss_pred CC
Confidence 64
No 377
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=85.35 E-value=7.6 Score=37.13 Aligned_cols=136 Identities=15% Similarity=0.029 Sum_probs=78.7
Q ss_pred ChHHHHHHHHHHHHcCCCEEEEecCC-CCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-CCc
Q 018519 134 DRNVVAQLVRRAERAGFKAIALTVDT-PRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI-DRS 211 (354)
Q Consensus 134 d~~~~~~~~~~a~~~G~~ai~i~vd~-p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 211 (354)
+++.+.+.++++.+.||+++-+++-. ...|.. +.-|.+ +.. . .... ......+.++.+... +..
T Consensus 152 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~-------~~s~~~----~~~-~-~~~~-~~~~e~v~avR~a~G~d~~ 217 (407)
T 2o56_A 152 EPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNW-------NQQNLN----GPL-T-DKIL-RLGYDRMAAIRDAVGPDVD 217 (407)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCB-------SCSCCC----SSC-C-HHHH-HHHHHHHHHHHHHHCTTSE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcccccCCcCcc-------ccCccc----CCC-c-hhHH-HHHHHHHHHHHHhcCCCCE
Confidence 67777788888889999999987520 000110 100111 000 0 0000 001112333333321 222
Q ss_pred cccc--ccCCHHHHH----HHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHc
Q 018519 212 LSWK--GVLTAEDAR----IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL 285 (354)
Q Consensus 212 ~~w~--Gi~~~~~a~----~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalal 285 (354)
+..+ +-.+.+++. .+.+.|++.|-- ...+..++.+.++++.+ ++||++++.+.+..++.+.+..
T Consensus 218 l~vDan~~~~~~~a~~~~~~l~~~~i~~iE~--------P~~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~ 287 (407)
T 2o56_A 218 IIAEMHAFTDTTSAIQFGRMIEELGIFYYEE--------PVMPLNPAQMKQVADKV--NIPLAAGERIYWRWGYRPFLEN 287 (407)
T ss_dssp EEEECTTCSCHHHHHHHHHHHGGGCCSCEEC--------SSCSSSHHHHHHHHHHC--CSCEEECTTCCHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHHhcCCCEEeC--------CCChhhHHHHHHHHHhC--CCCEEeCCCcCCHHHHHHHHHc
Confidence 3223 334666654 455677777641 11234678888888877 8999999999999999999998
Q ss_pred C-cCEEEEc
Q 018519 286 G-ASGIFIG 293 (354)
Q Consensus 286 G-Ad~V~ig 293 (354)
| +|.|++-
T Consensus 288 ~~~d~v~ik 296 (407)
T 2o56_A 288 GSLSVIQPD 296 (407)
T ss_dssp TCCSEECCC
T ss_pred CCCCEEecC
Confidence 7 8999883
No 378
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=85.34 E-value=5.7 Score=37.58 Aligned_cols=115 Identities=25% Similarity=0.263 Sum_probs=74.1
Q ss_pred CChHHHHHHHHHHHHcCCCEEEEecCCCC-CCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcC--
Q 018519 133 KDRNVVAQLVRRAERAGFKAIALTVDTPR-LGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQID-- 209 (354)
Q Consensus 133 ~d~~~~~~~~~~a~~~G~~ai~i~vd~p~-~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 209 (354)
.+++.+.+.++++.+.||+++-++++ |. .-.+ +.++.+...+
T Consensus 147 ~~~~~~~~~a~~~~~~G~~~iKik~~-~~~d~~~----------------------------------v~avr~a~~~~~ 191 (375)
T 1r0m_A 147 ADEQATVDLVRRHVEQGYRRIKLKIK-PGWDVQP----------------------------------VRATREAFPDIR 191 (375)
T ss_dssp SSHHHHHHHHHHHHHTTCSCEEEECB-TTBSHHH----------------------------------HHHHHHHCTTSC
T ss_pred CCHHHHHHHHHHHHHhcccEEEEecC-hHHHHHH----------------------------------HHHHHHHcCCCe
Confidence 36777778888888899999998873 21 0011 1111111101
Q ss_pred ----CcccccccCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHc
Q 018519 210 ----RSLSWKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL 285 (354)
Q Consensus 210 ----~~~~w~Gi~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalal 285 (354)
..-.|+--. .+.++.+.+.|++.|- |. ..+..++.+.++++.+ ++||++++-+.+..|+.+.+..
T Consensus 192 l~vDan~~~~~~~-~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i~~ 260 (375)
T 1r0m_A 192 LTVDANSAYTLAD-AGRLRQLDEYDLTYIE-------QP-LAWDDLVDHAELARRI--RTPLCLDESVASASDARKALAL 260 (375)
T ss_dssp EEEECTTCCCGGG-HHHHHTTGGGCCSCEE-------CC-SCTTCSHHHHHHHHHC--SSCEEESTTCCSHHHHHHHHHH
T ss_pred EEEeCCCCCCHHH-HHHHHHHHhCCCcEEE-------CC-CCcccHHHHHHHHHhC--CCCEEecCccCCHHHHHHHHHh
Confidence 112333112 4455555677777774 11 1233567788888776 7999999999999999999998
Q ss_pred C-cCEEEEc
Q 018519 286 G-ASGIFIG 293 (354)
Q Consensus 286 G-Ad~V~ig 293 (354)
| +|.|++-
T Consensus 261 ~~~d~v~ik 269 (375)
T 1r0m_A 261 GAGGVINLK 269 (375)
T ss_dssp TSCSEEEEC
T ss_pred CCCCEEEEC
Confidence 7 8999983
No 379
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=85.25 E-value=3.2 Score=38.41 Aligned_cols=73 Identities=19% Similarity=0.115 Sum_probs=46.6
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHH---HHhc--CCccEEEcCCCCCHHHHHHHHHcCcCEEEEcH
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVV---KATQ--GRIPVFLDGGVRRGTDVFKALALGASGIFIGR 294 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~---~~~~--~~i~vi~~GGi~~g~dv~kalalGAd~V~igr 294 (354)
.+.|++..+.|||.|.|.+-+.+......+.-+.+.++. +.+. -++||.+|. .+++-+.+|+..||+.+.=-+
T Consensus 66 ~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~vpiSIDT--~~~~V~~aAl~aGa~iINdvs 143 (297)
T 1tx2_A 66 VRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVKLPISIDT--YKAEVAKQAIEAGAHIINDIW 143 (297)
T ss_dssp HHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSCSCEEEEC--SCHHHHHHHHHHTCCEEEETT
T ss_pred HHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCCceEEEeC--CCHHHHHHHHHcCCCEEEECC
Confidence 356678899999999996543222112233333333333 2222 178999988 688888899999999887544
No 380
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=85.21 E-value=1.9 Score=40.00 Aligned_cols=80 Identities=26% Similarity=0.422 Sum_probs=51.7
Q ss_pred cccccccCCHHHHHHHHHhCCCEEEEecCC-c-C---CCCCCcChHHH----HHHHHHHhcCCccEEEcC--CCC-CHHH
Q 018519 211 SLSWKGVLTAEDARIAVQAGAAGIIVSNHG-A-R---QLDYVPATIMA----LEEVVKATQGRIPVFLDG--GVR-RGTD 278 (354)
Q Consensus 211 ~~~w~Gi~~~~~a~~~~~~G~d~I~vs~~g-g-~---~~~~~~~~~~~----l~~i~~~~~~~i~vi~~G--Gi~-~g~d 278 (354)
++..-++.+.-.|+.+.++|+|+|.+++.+ + . ..|.++-+++. +..|.+.. ++||++|. |.. ++..
T Consensus 18 ~i~~~~a~D~~sA~~~~~aG~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~--~~PviaD~d~Gyg~~~~~ 95 (295)
T 1xg4_A 18 PLQIVGTINANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVC--SLPLLVDADIGFGSSAFN 95 (295)
T ss_dssp SEEEEECSSHHHHHHHHHTTCSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHC--CSCEEEECTTCSSSSHHH
T ss_pred cEEEecCcCHHHHHHHHHcCCCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhC--CCCEEecCCcccCCCHHH
Confidence 343345567778999999999999998752 1 1 13445556543 33344444 68999987 333 4555
Q ss_pred HHH----HHHcCcCEEEE
Q 018519 279 VFK----ALALGASGIFI 292 (354)
Q Consensus 279 v~k----alalGAd~V~i 292 (354)
+.+ .+..||++|.|
T Consensus 96 ~~~~v~~l~~aGa~gv~i 113 (295)
T 1xg4_A 96 VARTVKSMIKAGAAGLHI 113 (295)
T ss_dssp HHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHcCCeEEEE
Confidence 543 44589999987
No 381
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=85.15 E-value=10 Score=36.67 Aligned_cols=151 Identities=15% Similarity=0.060 Sum_probs=82.2
Q ss_pred cCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchh--HHhhhccCCCCcCccccccCCc-cCcCcccchhhHHHHHhhhc
Q 018519 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRRE--ADIKNRFTLPPFLTLKNFQGLD-LGKMDEANDSGLAAYVAGQI 208 (354)
Q Consensus 132 ~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~--~~~r~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 208 (354)
..+++.+.+.++++.+.||+++-+.++.|...... ..-+..+. |.....+...... .... ......+.++.+.+.
T Consensus 147 ~~~~e~~~~~a~~~~~~Gf~~iKlKvG~~~~~~~~g~~~~~~~~~-~~~~~~p~~~~~d~~~~~-~~d~e~v~avR~avG 224 (424)
T 3v3w_A 147 GKDLDSTLEAVRKAKDKGYKAIRVQCGIPGIAKTYGVSTNTKSYE-PADADLPSVEVWSTEKYL-NYIPDVFAAVRKEFG 224 (424)
T ss_dssp ESSHHHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCC-----CC-SCCBSSCCEEEECHHHHH-HHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeccCccccccccccccccccc-cccccccccccccchhHH-HHHHHHHHHHHHHcC
Confidence 36788888888888889999999998864210000 00000000 0000000000000 0000 001112333333331
Q ss_pred -CCccccc--ccCCHHHHH----HHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHH
Q 018519 209 -DRSLSWK--GVLTAEDAR----IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK 281 (354)
Q Consensus 209 -~~~~~w~--Gi~~~~~a~----~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~k 281 (354)
+..+..+ +-.+.++|. .+.+.|++.|- |. ..+..++.+.++++.+ ++||++++.+.+..|+.+
T Consensus 225 ~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~ 294 (424)
T 3v3w_A 225 PDIHLLHDVHHRLTPIEAARLGKALEPYHLFWME-------DA-VPAENQESFKLIRQHT--TTPLAVGEVFNSIHDCRE 294 (424)
T ss_dssp SSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEE-------CC-SCCSSTTHHHHHHHHC--CSCEEECTTCCSGGGTHH
T ss_pred CCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCEEE-------CC-CChHhHHHHHHHHhhC--CCCEEEccCcCCHHHHHH
Confidence 2233333 335666664 45567888874 11 1123456778888876 899999999999999999
Q ss_pred HHHcC-cCEEEEcH
Q 018519 282 ALALG-ASGIFIGR 294 (354)
Q Consensus 282 alalG-Ad~V~igr 294 (354)
++..| +|.|++--
T Consensus 295 ~i~~ga~d~v~~k~ 308 (424)
T 3v3w_A 295 LIQNQWIDYIRTTI 308 (424)
T ss_dssp HHHTTCCSEECCCT
T ss_pred HHHcCCCCeEeecc
Confidence 99987 79998864
No 382
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=84.87 E-value=3.5 Score=38.25 Aligned_cols=190 Identities=17% Similarity=0.173 Sum_probs=98.2
Q ss_pred eEecccccccccCChhhHHHHHHHHHcCCcEEecC-CC------------CCCHHHHH-------hhCC-CceEEEE-ee
Q 018519 74 IMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSS-WS------------TSSVEEVA-------STGP-GIRFFQL-YV 131 (354)
Q Consensus 74 i~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~s~-~~------------~~~~eei~-------~~~~-~~~~~QL-y~ 131 (354)
.++.|.++ |...|+.+.++|...++.+ .+ ..+++|+. +..+ -|...=+ +.
T Consensus 19 ~i~~~~a~--------D~~sA~l~e~aGf~ai~vsG~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~~PviaD~d~G 90 (302)
T 3fa4_A 19 FIVAPGVY--------DGLSARVALSAGFDALYMTGAGTAASVHGQADLGICTLNDMRANAEMISNISPSTPVIADADTG 90 (302)
T ss_dssp CEEEEEEC--------SHHHHHHHHTTTCSCEEECHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHTTSTTSCEEEECTTT
T ss_pred eEEEecCc--------CHHHHHHHHHcCCCEEEeCcHHHHHHHcCCCCCCcCCHHHHHHHHHHHHhhccCCCEEEECCCC
Confidence 45566554 4479999999998766432 11 13555543 2222 2222221 11
Q ss_pred cCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc--C
Q 018519 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI--D 209 (354)
Q Consensus 132 ~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 209 (354)
+.++....+.+++.+++|+.++-|. |. +..+| .+.. + + +.+.. .+.....++..+.... .
T Consensus 91 yg~~~~v~~tv~~l~~aGaagv~iE-Dq-~~~Kr-----cgh~-~-g---k~l~~------~~e~~~rI~Aa~~A~~~~~ 152 (302)
T 3fa4_A 91 YGGPIMVARTTEQYSRSGVAAFHIE-DQ-VQTKR-----CGHL-A-G---KILVD------TDTYVTRIRAAVQARQRIG 152 (302)
T ss_dssp TSSHHHHHHHHHHHHHTTCCEEEEC-SB-CCC--------------C---CCBCC------HHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEC-CC-CCCcc-----cCCC-C-C---CeecC------HHHHHHHHHHHHHHHHhcC
Confidence 2356667788899999999887764 21 11111 1110 0 0 00000 0011222333333211 2
Q ss_pred Cccccc---------cc-CCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEc---CCCCCH
Q 018519 210 RSLSWK---------GV-LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD---GGVRRG 276 (354)
Q Consensus 210 ~~~~w~---------Gi-~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~---GGi~~g 276 (354)
+.+..- |+ -..+-++...++|||.|.+ +| +.+.+.+.++.+.++ .+|+.++ +|-...
T Consensus 153 ~d~~I~ARTDa~~~~gldeAi~Ra~ay~eAGAD~ifi--~g-------~~~~~ei~~~~~~~~-~~Pl~~n~~~~g~~p~ 222 (302)
T 3fa4_A 153 SDIVVIARTDSLQTHGYEESVARLRAARDAGADVGFL--EG-------ITSREMARQVIQDLA-GWPLLLNMVEHGATPS 222 (302)
T ss_dssp CCCEEEEEECCHHHHCHHHHHHHHHHHHTTTCSEEEE--TT-------CCCHHHHHHHHHHTT-TSCEEEECCTTSSSCC
T ss_pred CCEEEEEEecccccCCHHHHHHHHHHHHHcCCCEEee--cC-------CCCHHHHHHHHHHhc-CCceeEEEecCCCCCC
Confidence 322111 21 1334455678999999998 44 345677888888874 3677653 332212
Q ss_pred HHHHHHHHcCcCEEEEcHHHHHH
Q 018519 277 TDVFKALALGASGIFIGRPVVYS 299 (354)
Q Consensus 277 ~dv~kalalGAd~V~igr~~l~~ 299 (354)
..+.+.-.+|.+.|..+...+.+
T Consensus 223 ~~~~eL~~lGv~~v~~~~~~~ra 245 (302)
T 3fa4_A 223 ISAAEAKEMGFRIIIFPFAALGP 245 (302)
T ss_dssp CCHHHHHHHTCSEEEETTTTHHH
T ss_pred CCHHHHHHcCCCEEEEchHHHHH
Confidence 23444445899999999866653
No 383
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=84.69 E-value=4.1 Score=34.85 Aligned_cols=65 Identities=20% Similarity=0.173 Sum_probs=45.3
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcH
Q 018519 221 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 294 (354)
Q Consensus 221 ~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr 294 (354)
+.++.+.+.|++.|.+.. +. +...+.+.++++.++.++ ++.-|-+.+..++.+++..|||++ ++.
T Consensus 26 ~~~~~~~~~G~~~iev~~--~~-----~~~~~~i~~ir~~~~~~~-~ig~~~v~~~~~~~~a~~~Gad~i-v~~ 90 (205)
T 1wa3_A 26 EKALAVFEGGVHLIEITF--TV-----PDADTVIKELSFLKEKGA-IIGAGTVTSVEQCRKAVESGAEFI-VSP 90 (205)
T ss_dssp HHHHHHHHTTCCEEEEET--TS-----TTHHHHHHHTHHHHHTTC-EEEEESCCSHHHHHHHHHHTCSEE-ECS
T ss_pred HHHHHHHHCCCCEEEEeC--CC-----hhHHHHHHHHHHHCCCCc-EEEecccCCHHHHHHHHHcCCCEE-EcC
Confidence 345677889999998832 21 233456777777654334 344455789999999999999999 653
No 384
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=84.61 E-value=24 Score=32.31 Aligned_cols=179 Identities=11% Similarity=0.044 Sum_probs=97.0
Q ss_pred ceEecccccccccCChhhHHHHHHHHHcCCcEEe-----cCCCCCCHHHHHh-------h-CC-CceEEEEeecCChHHH
Q 018519 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL-----SSWSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNVV 138 (354)
Q Consensus 73 Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~-----s~~~~~~~eei~~-------~-~~-~~~~~QLy~~~d~~~~ 138 (354)
|.++.|+.-..-.+.++-..+.+-..+.|+...+ |+..+.+.||-.+ . .. -+.+...- ..+....
T Consensus 10 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~a 88 (300)
T 3eb2_A 10 PYLVSPVDAEGRVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVA-STSVADA 88 (300)
T ss_dssp EBCCCCBCTTSCBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEE-ESSHHHH
T ss_pred EEEeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHHH
Confidence 5556676422212222233555566677875443 3334566765432 1 22 45777764 4678888
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCccccc---
Q 018519 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWK--- 215 (354)
Q Consensus 139 ~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~--- 215 (354)
.++++.|+++|++++.+.. |.. .-| +.. ....-++++.+....|.+...
T Consensus 89 i~la~~a~~~Gadavlv~~--P~y-----------~~~---~~~------------~l~~~f~~va~a~~lPiilYn~P~ 140 (300)
T 3eb2_A 89 VAQAKLYEKLGADGILAIL--EAY-----------FPL---KDA------------QIESYFRAIADAVEIPVVIYTNPQ 140 (300)
T ss_dssp HHHHHHHHHHTCSEEEEEE--CCS-----------SCC---CHH------------HHHHHHHHHHHHCSSCEEEEECTT
T ss_pred HHHHHHHHHcCCCEEEEcC--CCC-----------CCC---CHH------------HHHHHHHHHHHHCCCCEEEEECcc
Confidence 8999999999999988743 321 101 000 011113344444444433332
Q ss_pred --cc-CCHHHHHHHHHhCCCEEE-EecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEE
Q 018519 216 --GV-LTAEDARIAVQAGAAGII-VSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIF 291 (354)
Q Consensus 216 --Gi-~~~~~a~~~~~~G~d~I~-vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~ 291 (354)
|+ ++++...++.+. ..|+ + .+ ...++..+.++.+..++++.|+ +|.= .-++.++++|++++.
T Consensus 141 ~tg~~l~~~~~~~La~~--pnIvgi-------Kd-ssgd~~~~~~~~~~~~~~f~v~-~G~d---~~~~~~l~~G~~G~i 206 (300)
T 3eb2_A 141 FQRSDLTLDVIARLAEH--PRIRYI-------KD-ASTNTGRLLSIINRCGDALQVF-SASA---HIPAAVMLIGGVGWM 206 (300)
T ss_dssp TCSSCCCHHHHHHHHTS--TTEEEE-------EE-CSSBHHHHHHHHHHHGGGSEEE-ECTT---SCHHHHHHTTCCEEE
T ss_pred ccCCCCCHHHHHHHHcC--CCEEEE-------Ec-CCCCHHHHHHHHHHcCCCeEEE-eCcH---HHHHHHHhCCCCEEE
Confidence 54 688888887543 3332 2 11 1123455666666655455544 3422 235788999999999
Q ss_pred EcH
Q 018519 292 IGR 294 (354)
Q Consensus 292 igr 294 (354)
.+.
T Consensus 207 s~~ 209 (300)
T 3eb2_A 207 AGP 209 (300)
T ss_dssp EGG
T ss_pred eCh
Confidence 887
No 385
>1dos_A Aldolase class II; lyase, classii fructose 1,6-bisphosphate aldolase, glycolysis; 1.67A {Escherichia coli} SCOP: c.1.10.2 PDB: 1b57_A* 1gyn_A 1zen_A
Probab=84.52 E-value=16 Score=34.71 Aligned_cols=82 Identities=17% Similarity=0.223 Sum_probs=58.6
Q ss_pred CCHHHHHHHHHh--CCC---EEEEec---CCcCCCCCCcChHHHHHHHHHHh----c---CCccEEEcCCCCCHH-HHHH
Q 018519 218 LTAEDARIAVQA--GAA---GIIVSN---HGARQLDYVPATIMALEEVVKAT----Q---GRIPVFLDGGVRRGT-DVFK 281 (354)
Q Consensus 218 ~~~~~a~~~~~~--G~d---~I~vs~---~gg~~~~~~~~~~~~l~~i~~~~----~---~~i~vi~~GGi~~g~-dv~k 281 (354)
.+|++|....+. |+| .+-++- ||-+....-.-.++.|.+|.+.+ + .++|++.=||=.++. ++.+
T Consensus 197 T~Peea~~fv~~ttgvd~~d~LAvaiGt~HG~Yk~g~p~L~~~~L~~i~~~i~~~~g~~~~~vpLVlHGgSG~~~e~i~~ 276 (358)
T 1dos_A 197 TQPEDVDYAYTELSKISPRFTIAASFGNVHGVYKAGNVVLTPTILRDSQEYVSKKHNLPHNSLNFVFHGGSGSTAQEIKD 276 (358)
T ss_dssp CCHHHHHHHHHHHHTTCSCEEEECCSSCCCSSCCCSCCCCCTHHHHHHHHHHHHHHTCCTTCSCEEECSCTTCCHHHHHH
T ss_pred CCHHHHHHHHHHhcCCChhceEEEecccccCccCCCCCCcCHHHHHHHHHHHHHHhCCCCCCCcEEEeCCCCCCHHHHHH
Confidence 689999999875 899 777753 56442111122456788887752 1 269999999877665 5678
Q ss_pred HHHcCcCEEEEcHHHHHH
Q 018519 282 ALALGASGIFIGRPVVYS 299 (354)
Q Consensus 282 alalGAd~V~igr~~l~~ 299 (354)
|+.+|..-|-|++-+-++
T Consensus 277 ai~~GV~KiNi~Tdl~~A 294 (358)
T 1dos_A 277 SVSYGVVKMNIDTDTQWA 294 (358)
T ss_dssp HHHTTEEEEEECHHHHHH
T ss_pred HHHCCCeEEEEcHHHHHH
Confidence 999999999999976554
No 386
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=84.43 E-value=16 Score=33.50 Aligned_cols=105 Identities=18% Similarity=0.281 Sum_probs=55.5
Q ss_pred HHHHHHHhCCCEEEEecCCcCCCCCC--cChHHHHHHHHHHhcCCccEEEcCCCC-----------CH-----H-HHHHH
Q 018519 222 DARIAVQAGAAGIIVSNHGARQLDYV--PATIMALEEVVKATQGRIPVFLDGGVR-----------RG-----T-DVFKA 282 (354)
Q Consensus 222 ~a~~~~~~G~d~I~vs~~gg~~~~~~--~~~~~~l~~i~~~~~~~i~vi~~GGi~-----------~g-----~-dv~ka 282 (354)
-++.+.+.|.+-|++--.|- ..... ...+..++.+++.. +.+||+.|..=. .| . =...|
T Consensus 153 ave~i~~~Gn~~i~L~erg~-~y~~~~~~vdl~~i~~lk~~~-~~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AA 230 (285)
T 3sz8_A 153 VVSKCGEVGNDRVMLCERGS-SFGYDNLVVDMLGFRQMAETT-GGCPVIFDVTHSLQCRDPLGDASGGRRRQVLDLARAG 230 (285)
T ss_dssp HHHHHHHTTCCCEEEEECCE-ECSSSCEECCTTHHHHHHHHT-TSCCEEEETTTTCC---------------HHHHHHHH
T ss_pred HHHHHHHcCCCcEEEEeCCC-CCCCCcCccCHHHHHHHHHhC-CCCCEEEeCCCccccCCCcCCCCCCchhhHHHHHHHH
Confidence 34455677887777643332 22111 13466777777654 148999863221 23 2 24578
Q ss_pred HHcCcCEEEEcHHHHHHHh-hcCHHHH-HHHHHHHHHHHHHHHHHhCC
Q 018519 283 LALGASGIFIGRPVVYSLA-AEGEKGV-RRVLEMLREEFELAMALSGC 328 (354)
Q Consensus 283 lalGAd~V~igr~~l~~~~-~~G~~gv-~~~l~~l~~el~~~m~~~G~ 328 (354)
+++|||+++|-..+--.-+ +.|...+ -+-++.+.++++..-...|.
T Consensus 231 vA~GA~gl~IE~H~~pd~al~D~~~sl~p~el~~lv~~i~~i~~~lg~ 278 (285)
T 3sz8_A 231 IAVGIAGLFLEAHPDPDRARCDGPSALPLHQLEGLLSQMKAIDDLVKR 278 (285)
T ss_dssp HHHCCSEEEEEEESCGGGCSCSSCCCEEGGGHHHHHHHHHHHHHHHTT
T ss_pred HHhCCCEEEEEeccChhccCCchhhccCHHHHHHHHHHHHHHHHHhCC
Confidence 8899999999874321110 1332110 02355566666666666664
No 387
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=84.36 E-value=4.2 Score=36.80 Aligned_cols=28 Identities=36% Similarity=0.430 Sum_probs=23.2
Q ss_pred Cccccc-ccCCHHHHHHHHHhCCCEEEEe
Q 018519 210 RSLSWK-GVLTAEDARIAVQAGAAGIIVS 237 (354)
Q Consensus 210 ~~~~w~-Gi~~~~~a~~~~~~G~d~I~vs 237 (354)
.++..+ ||.+++++..+..+|||+++|.
T Consensus 206 ~pi~vggGI~t~e~~~~~~~agAD~vVVG 234 (268)
T 1qop_A 206 APALQGFGISSPEQVSAAVRAGAAGAISG 234 (268)
T ss_dssp CCEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred CcEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 344445 7888999999999999999994
No 388
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=84.21 E-value=7.8 Score=37.15 Aligned_cols=136 Identities=19% Similarity=0.121 Sum_probs=77.7
Q ss_pred ChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-CCcc
Q 018519 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI-DRSL 212 (354)
Q Consensus 134 d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 212 (354)
+++.+.+.++++.+.||+++-+++..+. |.. . .|.+-+.....++ ......+.++.+... +..+
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~-G~~-------~-~~~~G~~~~~~~~------~~~~e~v~avRea~G~d~~l 213 (410)
T 2qq6_A 149 SNEEYIAVAREAVERGFDAIKLDVDDIT-GPL-------H-RDFWNGAISPREH------EAMVARVAAVREAVGPEVEV 213 (410)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCSS-STT-------C-SCSSSCCCCHHHH------HHHHHHHHHHHHHHCSSSEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEeeccccC-Ccc-------c-CCcCccccchhhH------HHHHHHHHHHHHhcCCCCEE
Confidence 5666777778888899999999872111 100 0 0100000000000 001112333333331 2223
Q ss_pred ccc--ccCCHHHHH----HHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcC
Q 018519 213 SWK--GVLTAEDAR----IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG 286 (354)
Q Consensus 213 ~w~--Gi~~~~~a~----~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalG 286 (354)
..+ +-.+.+++. .+.+.|++.|-- ...+..++.+.++++.+ ++||++++.+.+..++.+++..|
T Consensus 214 ~vDan~~~~~~~a~~~~~~l~~~~i~~iEe--------P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~~ 283 (410)
T 2qq6_A 214 AIDMHGRFDIPSSIRFARAMEPFGLLWLEE--------PTPPENLDALAEVRRST--STPICAGENVYTRFDFRELFAKR 283 (410)
T ss_dssp EEECTTCCCHHHHHHHHHHHGGGCCSEEEC--------CSCTTCHHHHHHHHTTC--SSCEEECTTCCSHHHHHHHHHTT
T ss_pred EEECCCCCCHHHHHHHHHHHhhcCCCeEEC--------CCChhhHHHHHHHHhhC--CCCEEeCCCcCCHHHHHHHHHcC
Confidence 223 334666664 445678887641 11234577888888766 79999999999999999999987
Q ss_pred -cCEEEEcH
Q 018519 287 -ASGIFIGR 294 (354)
Q Consensus 287 -Ad~V~igr 294 (354)
+|.|++--
T Consensus 284 ~~d~v~ik~ 292 (410)
T 2qq6_A 284 AVDYVMPDV 292 (410)
T ss_dssp CCSEECCBH
T ss_pred CCCEEecCc
Confidence 89998853
No 389
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=84.17 E-value=25 Score=32.13 Aligned_cols=180 Identities=16% Similarity=0.087 Sum_probs=97.9
Q ss_pred ceEecccccccccCChhhHHHHHHHHHcCCcEEe--cCC---CCCCHHHHHh-------h-CC-CceEEEEeecCChHHH
Q 018519 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--SSW---STSSVEEVAS-------T-GP-GIRFFQLYVYKDRNVV 138 (354)
Q Consensus 73 Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~--s~~---~~~~~eei~~-------~-~~-~~~~~QLy~~~d~~~~ 138 (354)
|.++.|+.-..-.+.++-..+.+-.-+.|+...+ ++. .+.+.||-.+ . .. -+.+...- ..+....
T Consensus 13 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~a 91 (297)
T 3flu_A 13 VALITPMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTG-ANNTVEA 91 (297)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHH
T ss_pred EeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CcCHHHH
Confidence 5556666422212222233566666678875443 332 3456665432 1 22 45666653 4677888
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCccccc---
Q 018519 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWK--- 215 (354)
Q Consensus 139 ~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~--- 215 (354)
.++++.|+++|++++.+. +|.. .-|. .. ....-++++.+....|.+...
T Consensus 92 i~la~~a~~~Gadavlv~--~P~y-----------~~~~---~~------------~l~~~f~~va~a~~lPiilYn~P~ 143 (297)
T 3flu_A 92 IALSQAAEKAGADYTLSV--VPYY-----------NKPS---QE------------GIYQHFKTIAEATSIPMIIYNVPG 143 (297)
T ss_dssp HHHHHHHHHTTCSEEEEE--CCCS-----------SCCC---HH------------HHHHHHHHHHHHCCSCEEEEECHH
T ss_pred HHHHHHHHHcCCCEEEEC--CCCC-----------CCCC---HH------------HHHHHHHHHHHhCCCCEEEEECCc
Confidence 899999999999998874 2431 1010 00 011113344444444544443
Q ss_pred --cc-CCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEE
Q 018519 216 --GV-LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFI 292 (354)
Q Consensus 216 --Gi-~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~i 292 (354)
|+ ++++...++.+.. ..+-+= + ...++..+.++.+..+++..| .+|. -.-++.++++|++++..
T Consensus 144 ~tg~~l~~~~~~~La~~p-nivgiK-------d-ssgd~~~~~~~~~~~~~~f~v-~~G~---d~~~l~~l~~G~~G~is 210 (297)
T 3flu_A 144 RTVVSMTNDTILRLAEIP-NIVGVK-------E-ASGNIGSNIELINRAPEGFVV-LSGD---DHTALPFMLCGGHGVIT 210 (297)
T ss_dssp HHSSCCCHHHHHHHTTST-TEEEEE-------E-CSCCHHHHHHHHHHSCTTCEE-EECC---GGGHHHHHHTTCCEEEE
T ss_pred hhccCCCHHHHHHHHcCC-CEEEEE-------e-CCCCHHHHHHHHHhcCCCeEE-EECc---HHHHHHHHhCCCCEEEe
Confidence 54 6888888776432 222221 1 112355566666666555654 4452 34477889999999988
Q ss_pred cH
Q 018519 293 GR 294 (354)
Q Consensus 293 gr 294 (354)
+.
T Consensus 211 ~~ 212 (297)
T 3flu_A 211 VA 212 (297)
T ss_dssp SG
T ss_pred ch
Confidence 77
No 390
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=84.01 E-value=2.8 Score=41.86 Aligned_cols=41 Identities=39% Similarity=0.709 Sum_probs=34.6
Q ss_pred hHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEc
Q 018519 250 TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 293 (354)
Q Consensus 250 ~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~ig 293 (354)
+|+.+.++++.. ++||++= |+.+.+|+.++..+|||+|.++
T Consensus 331 ~~~~i~~lr~~~--~~PvivK-gv~~~e~A~~a~~aGad~I~vs 371 (511)
T 1kbi_A 331 TWKDIEELKKKT--KLPIVIK-GVQRTEDVIKAAEIGVSGVVLS 371 (511)
T ss_dssp CHHHHHHHHHHC--SSCEEEE-EECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHHh--CCcEEEE-eCCCHHHHHHHHHcCCCEEEEc
Confidence 477788888876 7899987 4778999999999999999994
No 391
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=83.99 E-value=13 Score=35.43 Aligned_cols=122 Identities=18% Similarity=0.097 Sum_probs=75.9
Q ss_pred CChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-CCc
Q 018519 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI-DRS 211 (354)
Q Consensus 133 ~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 211 (354)
.+++.+.+.++++.+.||+++-+.++... +.| ...+.++.+... +..
T Consensus 141 ~~~e~~~~~a~~~~~~Gf~~~KlK~g~~~----~~d----------------------------~~~v~avR~a~g~~~~ 188 (379)
T 3r0u_A 141 GNVAETIQNIQNGVEANFTAIKVKTGADF----NRD----------------------------IQLLKALDNEFSKNIK 188 (379)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECSSCH----HHH----------------------------HHHHHHHHHHCCTTSE
T ss_pred CCHHHHHHHHHHHHHcCCCEEeeecCCCH----HHH----------------------------HHHHHHHHHhcCCCCe
Confidence 46777777777777889999999876421 011 111222222221 122
Q ss_pred cccc--ccCCHHHHHHH----HH--hCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHH
Q 018519 212 LSWK--GVLTAEDARIA----VQ--AGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKAL 283 (354)
Q Consensus 212 ~~w~--Gi~~~~~a~~~----~~--~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kal 283 (354)
+..| +-.+.++|.+. .+ .++..|- | ...+..++.+.++++.. .+||.++.-+.+..|+.+++
T Consensus 189 L~vDaN~~w~~~~A~~~~~~l~~~~~~l~~iE-------e-P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i 258 (379)
T 3r0u_A 189 FRFDANQGWNLAQTKQFIEEINKYSLNVEIIE-------Q-PVKYYDIKAMAEITKFS--NIPVVADESVFDAKDAERVI 258 (379)
T ss_dssp EEEECTTCCCHHHHHHHHHHHHTSCCCEEEEE-------C-CSCTTCHHHHHHHHHHC--SSCEEESTTCSSHHHHHHHH
T ss_pred EEEeCCCCcCHHHHHHHHHHHhhcCCCcEEEE-------C-CCCcccHHHHHHHHhcC--CCCEEeCCccCCHHHHHHHH
Confidence 3222 33466666543 34 3444432 1 11223477888888876 79999999999999999999
Q ss_pred HcC-cCEEEEcHHH
Q 018519 284 ALG-ASGIFIGRPV 296 (354)
Q Consensus 284 alG-Ad~V~igr~~ 296 (354)
..| +|.|++--..
T Consensus 259 ~~~a~d~v~~k~~~ 272 (379)
T 3r0u_A 259 DEQACNMINIKLAK 272 (379)
T ss_dssp HTTCCSEEEECHHH
T ss_pred HcCCCCEEEECccc
Confidence 987 7999886543
No 392
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=83.81 E-value=27 Score=32.25 Aligned_cols=180 Identities=14% Similarity=0.084 Sum_probs=98.0
Q ss_pred ceEecccccccccCChhhHHHHHHHHHcCCcEEe--c---CCCCCCHHHHHh-------h-CC-CceEEEEeecCChHHH
Q 018519 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--S---SWSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNVV 138 (354)
Q Consensus 73 Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~--s---~~~~~~~eei~~-------~-~~-~~~~~QLy~~~d~~~~ 138 (354)
|.++.|+.-..-.+.++-..+.+-.-+.|+...+ + +..+.+.||-.+ . .. -+.+...- ..+....
T Consensus 29 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg-~~st~ea 107 (314)
T 3qze_A 29 VALVTPFDAQGRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTG-ANSTREA 107 (314)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHH
T ss_pred EeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CcCHHHH
Confidence 5566676422212222233555556677875433 2 233456665432 1 22 35666653 4577788
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCccccc---
Q 018519 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWK--- 215 (354)
Q Consensus 139 ~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~--- 215 (354)
.++++.|+++|++++.+. +|.. .-|. .. ....-++++.+....|.+...
T Consensus 108 i~la~~A~~~Gadavlv~--~P~y-----------~~~s---~~------------~l~~~f~~va~a~~lPiilYn~P~ 159 (314)
T 3qze_A 108 VALTEAAKSGGADACLLV--TPYY-----------NKPT---QE------------GMYQHFRHIAEAVAIPQILYNVPG 159 (314)
T ss_dssp HHHHHHHHHTTCSEEEEE--CCCS-----------SCCC---HH------------HHHHHHHHHHHHSCSCEEEEECHH
T ss_pred HHHHHHHHHcCCCEEEEc--CCCC-----------CCCC---HH------------HHHHHHHHHHHhcCCCEEEEeCcc
Confidence 889999999999998875 3431 1010 00 001113444444444544433
Q ss_pred --cc-CCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEE
Q 018519 216 --GV-LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFI 292 (354)
Q Consensus 216 --Gi-~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~i 292 (354)
|+ ++++...++.+.. ..+-+= + ...++..+.++.+..+++..| .+|. -.-++.++++||+++.-
T Consensus 160 ~tg~~l~~~~~~~La~~p-nIvgiK-------d-ssgd~~~~~~~~~~~~~~f~v-~~G~---d~~~l~~l~~Ga~G~is 226 (314)
T 3qze_A 160 RTSCDMLPETVERLSKVP-NIIGIK-------E-ATGDLQRAKEVIERVGKDFLV-YSGD---DATAVELMLLGGKGNIS 226 (314)
T ss_dssp HHSCCCCHHHHHHHHTST-TEEEEE-------E-CSCCHHHHHHHHHHSCTTSEE-EESC---GGGHHHHHHTTCCEEEE
T ss_pred ccCCCCCHHHHHHHhcCC-CEEEEE-------c-CCCCHHHHHHHHHHcCCCeEE-EecC---hHHHHHHHHCCCCEEEe
Confidence 54 6888888877532 222221 1 112355566666666555654 4453 23377899999999988
Q ss_pred cH
Q 018519 293 GR 294 (354)
Q Consensus 293 gr 294 (354)
+.
T Consensus 227 ~~ 228 (314)
T 3qze_A 227 VT 228 (314)
T ss_dssp SG
T ss_pred cH
Confidence 77
No 393
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=83.79 E-value=7 Score=34.22 Aligned_cols=124 Identities=12% Similarity=0.090 Sum_probs=71.4
Q ss_pred cCChHHHHHHHHHHHHcCCCEEEEec-CCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCC
Q 018519 132 YKDRNVVAQLVRRAERAGFKAIALTV-DTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDR 210 (354)
Q Consensus 132 ~~d~~~~~~~~~~a~~~G~~ai~i~v-d~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (354)
..|...+.+.++.+++.|++.+.+.+ |.+ |. |. + .. ....++++.+.. ..
T Consensus 15 a~d~~~l~~~i~~~~~~Gad~i~l~i~Dg~------------fv-~~------~-~~--------~~~~~~~lr~~~-~~ 65 (228)
T 1h1y_A 15 SSDFANLAAEADRMVRLGADWLHMDIMDGH------------FV-PN------L-TI--------GAPVIQSLRKHT-KA 65 (228)
T ss_dssp GSCGGGHHHHHHHHHHTTCSEEEEEEEBSS------------SS-SC------B-CB--------CHHHHHHHHTTC-CS
T ss_pred eCCHHHHHHHHHHHHHcCCCEEEEEEecCC------------cC-cc------h-hh--------CHHHHHHHHhhc-CC
Confidence 46777888899999999999987654 221 11 11 0 00 011123332221 11
Q ss_pred ccccccc--C-CHHHHHHHHHhCCCEEEEecCCcCCCCCCcCh-HHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHc-
Q 018519 211 SLSWKGV--L-TAEDARIAVQAGAAGIIVSNHGARQLDYVPAT-IMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL- 285 (354)
Q Consensus 211 ~~~w~Gi--~-~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~-~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalal- 285 (354)
++.- ++ . ..+.+..+.++|+|+|++ |++.. ... ...+..+++. .+.++.+=.-.+..+.++.+.-
T Consensus 66 ~~~v-~lmv~d~~~~i~~~~~agad~v~v--H~~~~----~~~~~~~~~~i~~~---g~~igv~~~p~t~~e~~~~~~~~ 135 (228)
T 1h1y_A 66 YLDC-HLMVTNPSDYVEPLAKAGASGFTF--HIEVS----RDNWQELIQSIKAK---GMRPGVSLRPGTPVEEVFPLVEA 135 (228)
T ss_dssp EEEE-EEESSCGGGGHHHHHHHTCSEEEE--EGGGC----TTTHHHHHHHHHHT---TCEEEEEECTTSCGGGGHHHHHS
T ss_pred cEEE-EEEecCHHHHHHHHHHcCCCEEEE--CCCCc----ccHHHHHHHHHHHc---CCCEEEEEeCCCCHHHHHHHHhc
Confidence 1110 11 1 233577888899999999 66521 223 3444444432 4556665556777777777776
Q ss_pred --CcCEEEEcH
Q 018519 286 --GASGIFIGR 294 (354)
Q Consensus 286 --GAd~V~igr 294 (354)
++|.|.+++
T Consensus 136 ~~~~d~vl~~s 146 (228)
T 1h1y_A 136 ENPVELVLVMT 146 (228)
T ss_dssp SSCCSEEEEES
T ss_pred CCCCCEEEEEe
Confidence 999999975
No 394
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=83.76 E-value=4.5 Score=37.97 Aligned_cols=73 Identities=19% Similarity=0.231 Sum_probs=47.2
Q ss_pred CHHHH-HHHHHhCCCEEEEecCCcCCC--CCCcC----hHHHHHHHHHHhcCCccEEEc--CCCCCHHHHHHHHHcCcCE
Q 018519 219 TAEDA-RIAVQAGAAGIIVSNHGARQL--DYVPA----TIMALEEVVKATQGRIPVFLD--GGVRRGTDVFKALALGASG 289 (354)
Q Consensus 219 ~~~~a-~~~~~~G~d~I~vs~~gg~~~--~~~~~----~~~~l~~i~~~~~~~i~vi~~--GGi~~g~dv~kalalGAd~ 289 (354)
+.+.. +.+.++|+|+|.+......+. ..+.+ .++.+.++++.+ ++||++- |...+.+++.++..+|||+
T Consensus 128 ~~~~~~~~~~~~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~~--~~Pv~vK~~~~~~~~~~a~~a~~~Gad~ 205 (349)
T 1p0k_A 128 TAAQAKEAVEMIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRV--SVPVIVKEVGFGMSKASAGKLYEAGAAA 205 (349)
T ss_dssp CHHHHHHHHHHTTCSEEEEEECTTTTC--------CTTHHHHHHHHHHHC--SSCEEEEEESSCCCHHHHHHHHHHTCSE
T ss_pred CHHHHHHHHHhcCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHHc--CCCEEEEecCCCCCHHHHHHHHHcCCCE
Confidence 44444 445678999998842211110 01111 356777887776 7899885 4446789998888999999
Q ss_pred EEEc
Q 018519 290 IFIG 293 (354)
Q Consensus 290 V~ig 293 (354)
|.+.
T Consensus 206 I~v~ 209 (349)
T 1p0k_A 206 VDIG 209 (349)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 9994
No 395
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=83.70 E-value=2.6 Score=40.31 Aligned_cols=72 Identities=15% Similarity=0.134 Sum_probs=50.0
Q ss_pred CCHHHHHHHH-HhCCCEEEEecCCcC---CCCCCcC-----hHHHHHHHHHHhcCCccEEEc--CCCCCHHHHHHHHHcC
Q 018519 218 LTAEDARIAV-QAGAAGIIVSNHGAR---QLDYVPA-----TIMALEEVVKATQGRIPVFLD--GGVRRGTDVFKALALG 286 (354)
Q Consensus 218 ~~~~~a~~~~-~~G~d~I~vs~~gg~---~~~~~~~-----~~~~l~~i~~~~~~~i~vi~~--GGi~~g~dv~kalalG 286 (354)
..++.+.++. .+++|++.|+-.-.. + ..+.. .++.|.++++.+ ++||++- |+-.+++++.++..+|
T Consensus 135 ~~~~~~~~av~~~~a~al~Ihln~~~~~~~-p~g~~~~~~~~~~~i~~i~~~~--~vPVivK~vG~g~s~~~A~~l~~aG 211 (368)
T 3vkj_A 135 YGLKEFQDAIQMIEADAIAVHLNPAQEVFQ-PEGEPEYQIYALEKLRDISKEL--SVPIIVKESGNGISMETAKLLYSYG 211 (368)
T ss_dssp CCHHHHHHHHHHTTCSEEEEECCHHHHHHS-SSCCCBCBTHHHHHHHHHHTTC--SSCEEEECSSSCCCHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHhcCCCeEEEecchhhhhC-CCCCchhhHHHHHHHHHHHHHc--CCCEEEEeCCCCCCHHHHHHHHhCC
Confidence 3567777654 468888888421110 1 11222 566777777766 7999996 5557899999999999
Q ss_pred cCEEEE
Q 018519 287 ASGIFI 292 (354)
Q Consensus 287 Ad~V~i 292 (354)
||+|-+
T Consensus 212 ad~I~V 217 (368)
T 3vkj_A 212 IKNFDT 217 (368)
T ss_dssp CCEEEC
T ss_pred CCEEEE
Confidence 999998
No 396
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=83.42 E-value=6.7 Score=37.49 Aligned_cols=138 Identities=14% Similarity=-0.012 Sum_probs=78.6
Q ss_pred ChHHHHHHHHHHHHcCCCEEEEecCC-CCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-CCc
Q 018519 134 DRNVVAQLVRRAERAGFKAIALTVDT-PRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI-DRS 211 (354)
Q Consensus 134 d~~~~~~~~~~a~~~G~~ai~i~vd~-p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 211 (354)
+++.+.+.++++.+.||+++-+++.. ...|.. |.-|.+ +.. . .... ......+..+.+... +..
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~-------~~s~~~----g~~-~-~~~~-~~~~e~v~avr~avG~d~~ 211 (403)
T 2ox4_A 146 RKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSR-------EGVFLE----GPL-P-SETI-KIGVERVEAIRNAVGPDVD 211 (403)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCC-------TTCCCS----SSC-C-HHHH-HHHHHHHHHHHHHHCTTSE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCcccc-------ccCccc----CCC-c-hHHH-HHHHHHHHHHHHHhCCCCe
Confidence 67778888888889999999988520 000110 100110 000 0 0000 001112333333331 222
Q ss_pred cccc--ccCCHHHHH----HHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHc
Q 018519 212 LSWK--GVLTAEDAR----IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL 285 (354)
Q Consensus 212 ~~w~--Gi~~~~~a~----~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalal 285 (354)
+..+ +-.+.+++. .+.+.|++.|- + ...+..++.+.++++.+ ++||++++.+.+..++.+++..
T Consensus 212 l~vDan~~~~~~~ai~~~~~l~~~~i~~iE-------~-P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~ 281 (403)
T 2ox4_A 212 IIVENHGHTDLVSAIQFAKAIEEFNIFFYE-------E-INTPLNPRLLKEAKKKI--DIPLASGERIYSRWGFLPFLED 281 (403)
T ss_dssp EEEECTTCSCHHHHHHHHHHHGGGCEEEEE-------C-CSCTTSTHHHHHHHHTC--CSCEEECTTCCHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHHhhCCCEEe-------C-CCChhhHHHHHHHHHhC--CCCEEecCCcCCHHHHHHHHHc
Confidence 3223 334666664 44556666553 1 11234577888888876 7999999999999999999998
Q ss_pred C-cCEEEEcHH
Q 018519 286 G-ASGIFIGRP 295 (354)
Q Consensus 286 G-Ad~V~igr~ 295 (354)
| +|.|++--.
T Consensus 282 ~~~d~v~ik~~ 292 (403)
T 2ox4_A 282 RSIDVIQPDLG 292 (403)
T ss_dssp TCCSEECCCHH
T ss_pred CCCCEEecCcc
Confidence 7 899998643
No 397
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=83.26 E-value=3 Score=39.57 Aligned_cols=65 Identities=28% Similarity=0.316 Sum_probs=51.2
Q ss_pred CHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEc
Q 018519 219 TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 293 (354)
Q Consensus 219 ~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~ig 293 (354)
+.+.+..+.++|+|.|.++-- .....+++++|++.. ++|+++|-= .++.-+++|+..|+|.+=|-
T Consensus 48 tv~Qi~~l~~aG~diVRvavp-------~~~~a~al~~I~~~~--~vPlvaDiH-f~~~lal~a~e~G~dklRIN 112 (366)
T 3noy_A 48 TLNQIKRLYEAGCEIVRVAVP-------HKEDVEALEEIVKKS--PMPVIADIH-FAPSYAFLSMEKGVHGIRIN 112 (366)
T ss_dssp HHHHHHHHHHTTCCEEEEECC-------SHHHHHHHHHHHHHC--SSCEEEECC-SCHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHcCCCEEEeCCC-------ChHHHHHHHHHHhcC--CCCEEEeCC-CCHHHHHHHHHhCCCeEEEC
Confidence 667788999999999998321 123357889998877 899998842 67889999999999998765
No 398
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=83.23 E-value=6.8 Score=35.91 Aligned_cols=73 Identities=22% Similarity=0.141 Sum_probs=47.0
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHH---HHHhc--CCccEEEcCCCCCHHHHHHHHHcCcCEEEEcH
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEV---VKATQ--GRIPVFLDGGVRRGTDVFKALALGASGIFIGR 294 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i---~~~~~--~~i~vi~~GGi~~g~dv~kalalGAd~V~igr 294 (354)
.+.|++..+.|||.|.|.+.+.|......+..+.+.++ .+.+. .++||-+|. .+++-+.+|+..||+.|.=-+
T Consensus 41 ~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~~piSIDT--~~~~va~aAl~aGa~iINdvs 118 (282)
T 1aj0_A 41 VKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWISVDT--SKPEVIRESAKVGAHIINDIR 118 (282)
T ss_dssp HHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEC--CCHHHHHHHHHTTCCEEEETT
T ss_pred HHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcCCeEEEeC--CCHHHHHHHHHcCCCEEEECC
Confidence 35677889999999999764433221223333333322 22222 167888876 778888899999999987655
No 399
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=83.04 E-value=11 Score=35.61 Aligned_cols=66 Identities=15% Similarity=0.048 Sum_probs=50.2
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcC-cCEEEEcHH
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRP 295 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalG-Ad~V~igr~ 295 (354)
.+.++.+.+.|++.|- |. ..+..++.+.++++.. .+||++++-+.+..|+.+++..| +|.|++--.
T Consensus 208 ~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~ 274 (377)
T 3my9_A 208 MKILRDVDAFRPTFIE-------QP-VPRRHLDAMAGFAAAL--DTPILADESCFDAVDLMEVVRRQAADAISVKIM 274 (377)
T ss_dssp HHHHHHHHTTCCSCEE-------CC-SCTTCHHHHHHHHHHC--SSCEEESTTCSSHHHHHHHHHHTCCSEEECCHH
T ss_pred HHHHHHHhhcCCCEEE-------CC-CCccCHHHHHHHHHhC--CCCEEECCccCCHHHHHHHHHcCCCCEEEeccc
Confidence 3455667778888874 11 1233577888888876 79999999999999999999977 899988643
No 400
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=83.04 E-value=15 Score=41.31 Aligned_cols=121 Identities=14% Similarity=0.120 Sum_probs=85.6
Q ss_pred HHHHHHHHhCCCEEEEecCCc---CCCCC-CcChHHHHHHHHHHh-----cCCcc-EEEcCCCCCHHHHHHHHHcCcCEE
Q 018519 221 EDARIAVQAGAAGIIVSNHGA---RQLDY-VPATIMALEEVVKAT-----QGRIP-VFLDGGVRRGTDVFKALALGASGI 290 (354)
Q Consensus 221 ~~a~~~~~~G~d~I~vs~~gg---~~~~~-~~~~~~~l~~i~~~~-----~~~i~-vi~~GGi~~g~dv~kalalGAd~V 290 (354)
++|..|++.|+..|++|-.+. ...+. ..|++-++..+..++ +.++. |+=+|-+|+.-+++-.+-.||++|
T Consensus 585 ~~a~~av~~g~~iliLsDr~~~~~~~~~~~~ip~lla~~avh~~Li~~~~R~~~~lvvesg~~r~~Hh~a~l~GyGA~av 664 (1520)
T 1ofd_A 585 KTAIATVQAGAEILVLTDRPNGAILTENQSFIPPLLAVGAVHHHLIRAGLRLKASLIVDTAQCWSTHHFACLVGYGASAI 664 (1520)
T ss_dssp HHHHHHHHTTCSEEEEESSGGGCCCCTTEEECCHHHHHHHHHHHHHHTTCGGGCEEEEECSSCCSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHCCCcEEEEcCCCCcCCCCCCccCcCHHHHHHHHHHHHHhcCCcccccEEEEeCCcChHHHHHHHHHcchhhh
Confidence 466788999999999998762 12222 356666666666554 23454 555688999999988888999999
Q ss_pred EEcHHH--HHHH---------hhcC-------HHHHHHHHHHHHHHHHHHHHHhCCCChhhhcccceee
Q 018519 291 FIGRPV--VYSL---------AAEG-------EKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVT 341 (354)
Q Consensus 291 ~igr~~--l~~~---------~~~G-------~~gv~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l~~ 341 (354)
.=-=+| +..+ ...| ++.+.+|.+.+.+.|...|..+|.+.+..-++.-+..
T Consensus 665 ~Pyla~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ny~~a~~~Gl~KimskmGIst~~sY~gaqiFe 733 (1520)
T 1ofd_A 665 CPYLALESVRQWWLDEKTQKLMENGRLDRIDLPTALKNYRQSVEAGLFKILSKMGISLLASYHGAQIFE 733 (1520)
T ss_dssp ECHHHHHHHHHHHSCHHHHHHHTTSSCCCCCHHHHHHHHHHHHHHHHHHHHHHTTCCBHHHHHTCCCEE
T ss_pred cHHHHHHHHHHHHhcccchhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhccHhhhhhcCCceeee
Confidence 522111 2222 1122 3578899999999999999999999999988776553
No 401
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=82.94 E-value=4 Score=39.97 Aligned_cols=101 Identities=14% Similarity=0.147 Sum_probs=57.1
Q ss_pred c-eEEEEeecCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHH
Q 018519 124 I-RFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAA 202 (354)
Q Consensus 124 ~-~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (354)
| .++-|-+..+.+.+.+.++.++++|+++|.++-.... |. +.. .+. .. ..-+.+.. .......-+.+
T Consensus 298 P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~---~~-d~~-~~~-~~---~GGlSG~~---~~~~sl~~i~~ 365 (443)
T 1tv5_A 298 PLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQ---IN-DIK-SFE-NK---KGGVSGAK---LKDISTKFICE 365 (443)
T ss_dssp CEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSC---CC-CCG-GGT-TC---CSEEEEHH---HHHHHHHHHHH
T ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcc---cc-ccc-ccc-cc---cCCcCCCc---chHHHHHHHHH
Confidence 5 6777755445557788899999999999988643221 10 000 000 00 00000000 00000111333
Q ss_pred HHhhh--cCCcccccccCCHHHHHHHHHhCCCEEEE
Q 018519 203 YVAGQ--IDRSLSWKGVLTAEDARIAVQAGAAGIIV 236 (354)
Q Consensus 203 ~~~~~--~~~~~~w~Gi~~~~~a~~~~~~G~d~I~v 236 (354)
+.+.+ ..|.+.-.||.+.+||.+++.+|||+|.+
T Consensus 366 v~~~v~~~iPVIg~GGI~s~~DA~e~l~aGAd~Vqi 401 (443)
T 1tv5_A 366 MYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQL 401 (443)
T ss_dssp HHHHTTTCSCEEEESSCCSHHHHHHHHHTTEEEEEE
T ss_pred HHHHcCCCCcEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 44444 34566666899999999999999999988
No 402
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=82.88 E-value=5 Score=37.29 Aligned_cols=80 Identities=21% Similarity=0.194 Sum_probs=52.1
Q ss_pred cccccccCCHHHHHHHHHhCCCEEEEecCC-----cCCCCCCcChHH----HHHHHHHHhcCCccEEEcCCCC--CHHHH
Q 018519 211 SLSWKGVLTAEDARIAVQAGAAGIIVSNHG-----ARQLDYVPATIM----ALEEVVKATQGRIPVFLDGGVR--RGTDV 279 (354)
Q Consensus 211 ~~~w~Gi~~~~~a~~~~~~G~d~I~vs~~g-----g~~~~~~~~~~~----~l~~i~~~~~~~i~vi~~GGi~--~g~dv 279 (354)
++..-+..+.-.|+.+.++|+|+|.+++.+ | ..|.++-+++ .+..|.+.. ++||++|..-. ++.++
T Consensus 30 ~i~~~~ayD~~sA~l~e~aG~dai~vs~~s~a~~~G-~pD~~~vt~~em~~~~~~I~r~~--~~pviaD~d~Gyg~~~~v 106 (305)
T 3ih1_A 30 ILQIPGAHDAMAALVARNTGFLALYLSGAAYTASKG-LPDLGIVTSTEVAERARDLVRAT--DLPVLVDIDTGFGGVLNV 106 (305)
T ss_dssp CEEEEBCSSHHHHHHHHHTTCSCEEECHHHHHHHHT-CCSSSCSCHHHHHHHHHHHHHHH--CCCEEEECTTCSSSHHHH
T ss_pred cEEEecCcCHHHHHHHHHcCCCEEEECcHHHHHhCC-CCCCCcCCHHHHHHHHHHHHHhc--CCCEEEECCCCCCCHHHH
Confidence 444446667788999999999999998721 2 2345555554 234444444 78999987654 44444
Q ss_pred H---H-HHHcCcCEEEEc
Q 018519 280 F---K-ALALGASGIFIG 293 (354)
Q Consensus 280 ~---k-alalGAd~V~ig 293 (354)
. + ....||++|.|-
T Consensus 107 ~~~v~~l~~aGaagv~iE 124 (305)
T 3ih1_A 107 ARTAVEMVEAKVAAVQIE 124 (305)
T ss_dssp HHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHhCCcEEEEC
Confidence 3 3 334899999764
No 403
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=82.86 E-value=8.6 Score=36.71 Aligned_cols=120 Identities=15% Similarity=0.057 Sum_probs=76.4
Q ss_pred CChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-CCc
Q 018519 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI-DRS 211 (354)
Q Consensus 133 ~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 211 (354)
.+++.+.+.++++.+.|++++-+.+++.. ..|+ ..+.++.+... +..
T Consensus 141 ~~~e~~~~~a~~~~~~G~~~~KiKvG~~~----~~d~----------------------------~~v~avR~a~g~~~~ 188 (391)
T 3gd6_A 141 EEVESNLDVVRQKLEQGFDVFRLYVGKNL----DADE----------------------------EFLSRVKEEFGSRVR 188 (391)
T ss_dssp THHHHHHHHHHHHHHTTCCEEEEECSSCH----HHHH----------------------------HHHHHHHHHHGGGCE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeeCCCH----HHHH----------------------------HHHHHHHHHcCCCCc
Confidence 45677777777777889999999887521 1110 11222222221 122
Q ss_pred cc-cc--ccCCHHHHH----HHHHhCC--CEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHH
Q 018519 212 LS-WK--GVLTAEDAR----IAVQAGA--AGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKA 282 (354)
Q Consensus 212 ~~-w~--Gi~~~~~a~----~~~~~G~--d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~ka 282 (354)
+. .+ +-.++++|. .+.+.|+ +.|- |. ..+..++.+.++++.+ ++|| +..+.+..|+.++
T Consensus 189 l~~vDan~~~~~~~A~~~~~~l~~~~i~~~~iE-------qP-~~~~d~~~~~~l~~~~--~iPI--dE~~~~~~~~~~~ 256 (391)
T 3gd6_A 189 IKSYDFSHLLNWKDAHRAIKRLTKYDLGLEMIE-------SP-APRNDFDGLYQLRLKT--DYPI--SEHVWSFKQQQEM 256 (391)
T ss_dssp EEEEECTTCSCHHHHHHHHHHHTTCCSSCCEEE-------CC-SCTTCHHHHHHHHHHC--SSCE--EEECCCHHHHHHH
T ss_pred EEEecCCCCcCHHHHHHHHHHHHhcCCCcceec-------CC-CChhhHHHHHHHHHHc--CCCc--CCCCCCHHHHHHH
Confidence 33 33 334666665 4455677 5553 11 1233578888888877 7999 8899999999999
Q ss_pred HHcC-cCEEEEcHHH
Q 018519 283 LALG-ASGIFIGRPV 296 (354)
Q Consensus 283 lalG-Ad~V~igr~~ 296 (354)
+..| +|.|++--..
T Consensus 257 ~~~~~~d~v~~k~~~ 271 (391)
T 3gd6_A 257 IKKDAIDIFNISPVF 271 (391)
T ss_dssp HHHTCCSEEEECHHH
T ss_pred HHcCCCCEEEECchh
Confidence 9987 7999998644
No 404
>3qw3_A Orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative (OMPDCASE-OPRTASE,...; orotidine monophosphate decarboxylase; 1.70A {Leishmania infantum}
Probab=82.81 E-value=2.3 Score=38.53 Aligned_cols=77 Identities=22% Similarity=0.290 Sum_probs=48.3
Q ss_pred HhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCC-HHHHHHHHHcCcC----E--EEEcHHHHHHH
Q 018519 228 QAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR-GTDVFKALALGAS----G--IFIGRPVVYSL 300 (354)
Q Consensus 228 ~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~-g~dv~kalalGAd----~--V~igr~~l~~~ 300 (354)
++|.++++++.+- .+.+..+++.+++ .+++ .=||+- +.+...+++.|+| . +.+|||++.+
T Consensus 168 ~~g~~GvV~~at~----------~~e~~~ir~~~~~-~~~l-~PGIg~qg~tp~~a~~~G~d~~~~~~livvGR~I~~A- 234 (255)
T 3qw3_A 168 VNGNVGLVVGATD----------PVALARVRARAPT-LWFL-VPGIGAQGGSLKASLDAGLRADGSGMLINVSRGLARA- 234 (255)
T ss_dssp GGSCEEEEECSSC----------HHHHHHHHHHCSS-CCEE-ECCC-----CHHHHHHHHCCTTSCCEEEEESHHHHTS-
T ss_pred hhCCeEEEECCCC----------HHHHHHHHHHCCC-CeEE-ECCcCCCCCCHHHHHHcCCCcccCeeEEEeChhhcCC-
Confidence 3799999984321 2346677777653 4454 455653 3356677778999 4 9999999874
Q ss_pred hhcCHHHHHHHHHHHHHHHHHH
Q 018519 301 AAEGEKGVRRVLEMLREEFELA 322 (354)
Q Consensus 301 ~~~G~~gv~~~l~~l~~el~~~ 322 (354)
+......+.+++|++..
T Consensus 235 -----~dp~~aa~~i~~~i~~~ 251 (255)
T 3qw3_A 235 -----ADPRAAAKELCEEINAI 251 (255)
T ss_dssp -----SCHHHHHHHHHHHHHHH
T ss_pred -----CCHHHHHHHHHHHHHHH
Confidence 12345666777777654
No 405
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=82.71 E-value=9.5 Score=35.63 Aligned_cols=91 Identities=14% Similarity=0.019 Sum_probs=55.4
Q ss_pred CCceEEEEee------cCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCccc
Q 018519 122 PGIRFFQLYV------YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEA 195 (354)
Q Consensus 122 ~~~~~~QLy~------~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~ 195 (354)
.-+.++-|-. ..+.+...+.+++++++|++.|.++-..... .. .|.+ + . .
T Consensus 209 ~~pv~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~--------~~--~~~~---~---~--------~ 264 (338)
T 1z41_A 209 DGPLFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVH--------AD--INVF---P---G--------Y 264 (338)
T ss_dssp CSCEEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSC--------CC--CCCC---T---T--------T
T ss_pred CCcEEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCcccc--------CC--CCCC---c---c--------c
Confidence 4456666643 2345667788899999999999887532110 00 0100 0 0 0
Q ss_pred chhhHHHHHhhhcCCcccccccCCHHHHHHHHHhC-CCEEEE
Q 018519 196 NDSGLAAYVAGQIDRSLSWKGVLTAEDARIAVQAG-AAGIIV 236 (354)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~w~Gi~~~~~a~~~~~~G-~d~I~v 236 (354)
...-+.++.+....|.+.-.||.+++++..+++.| +|.|.+
T Consensus 265 ~~~~~~~ir~~~~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~i 306 (338)
T 1z41_A 265 QVSFAEKIREQADMATGAVGMITDGSMAEEILQNGRADLIFI 306 (338)
T ss_dssp THHHHHHHHHHHCCEEEECSSCCSHHHHHHHHHTTSCSEEEE
T ss_pred hHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHcCCceEEee
Confidence 01112334444445555555788999999999999 999988
No 406
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=82.66 E-value=29 Score=31.75 Aligned_cols=177 Identities=14% Similarity=0.110 Sum_probs=97.6
Q ss_pred ceEecccccccccCChhhHHHHHHHHHcCCcEEe--cC---CCCCCHHHHHh-------h-CC--CceEEEEeecCChHH
Q 018519 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--SS---WSTSSVEEVAS-------T-GP--GIRFFQLYVYKDRNV 137 (354)
Q Consensus 73 Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~--s~---~~~~~~eei~~-------~-~~--~~~~~QLy~~~d~~~ 137 (354)
|.++.|+ -..-.+.++-..+.+-.-+.|+...+ ++ ..+.+.||-.+ . .+ -+.+...- ..+...
T Consensus 14 ~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg-~~~t~~ 91 (301)
T 3m5v_A 14 TALITPF-KNGKVDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAG-SNATHE 91 (301)
T ss_dssp EECCCCE-ETTEECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECC-CSSHHH
T ss_pred EeeecCc-CCCCCCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCC-CCCHHH
Confidence 4555666 22222333334566666678875544 22 23456665322 1 22 35555543 457778
Q ss_pred HHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCccccc--
Q 018519 138 VAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWK-- 215 (354)
Q Consensus 138 ~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~-- 215 (354)
..++++.|+++|++++.+. +|.. .-| +.. ....-++++.+....|.+...
T Consensus 92 ai~la~~a~~~Gadavlv~--~P~y-----------~~~---s~~------------~l~~~f~~va~a~~lPiilYn~P 143 (301)
T 3m5v_A 92 AVGLAKFAKEHGADGILSV--APYY-----------NKP---TQQ------------GLYEHYKAIAQSVDIPVLLYNVP 143 (301)
T ss_dssp HHHHHHHHHHTTCSEEEEE--CCCS-----------SCC---CHH------------HHHHHHHHHHHHCSSCEEEEECH
T ss_pred HHHHHHHHHHcCCCEEEEc--CCCC-----------CCC---CHH------------HHHHHHHHHHHhCCCCEEEEeCc
Confidence 8889999999999998875 3431 101 000 011113444444444544333
Q ss_pred ---cc-CCHHHHHHHHHh--CCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCE
Q 018519 216 ---GV-LTAEDARIAVQA--GAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASG 289 (354)
Q Consensus 216 ---Gi-~~~~~a~~~~~~--G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~ 289 (354)
|+ ++++...++.+. .+-+|.-+ ..++..+.++.+.. ++..| .+|. -.-++.++++|+++
T Consensus 144 ~~tg~~l~~~~~~~La~~~pnivgiKds----------sgd~~~~~~~~~~~-~~f~v-~~G~---d~~~~~~l~~G~~G 208 (301)
T 3m5v_A 144 GRTGCEISTDTIIKLFRDCENIYGVKEA----------SGNIDKCVDLLAHE-PRMML-ISGE---DAINYPILSNGGKG 208 (301)
T ss_dssp HHHSCCCCHHHHHHHHHHCTTEEEEEEC----------SSCHHHHHHHHHHC-TTSEE-EECC---GGGHHHHHHTTCCE
T ss_pred hhhCcCCCHHHHHHHHhcCCCEEEEEeC----------CCCHHHHHHHHHhC-CCeEE-EEcc---HHHHHHHHHcCCCE
Confidence 54 688888888776 23333321 12345566666655 45544 4553 23467889999999
Q ss_pred EEEcH
Q 018519 290 IFIGR 294 (354)
Q Consensus 290 V~igr 294 (354)
+.-+.
T Consensus 209 ~is~~ 213 (301)
T 3m5v_A 209 VISVT 213 (301)
T ss_dssp EEESG
T ss_pred EEehH
Confidence 99876
No 407
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=82.48 E-value=6 Score=36.64 Aligned_cols=81 Identities=21% Similarity=0.311 Sum_probs=51.9
Q ss_pred cccccccCCHHHHHHHHHhCCCEEEEecCC-c-C---CCCCCcChHHH----HHHHHHHhcCCccEEEcCCCC--CHHHH
Q 018519 211 SLSWKGVLTAEDARIAVQAGAAGIIVSNHG-A-R---QLDYVPATIMA----LEEVVKATQGRIPVFLDGGVR--RGTDV 279 (354)
Q Consensus 211 ~~~w~Gi~~~~~a~~~~~~G~d~I~vs~~g-g-~---~~~~~~~~~~~----l~~i~~~~~~~i~vi~~GGi~--~g~dv 279 (354)
++..-++.+.-.|+.+.++|+|+|.+++.+ + . ..|.++-+++. +..|.+.. ++||++|..-. ++.++
T Consensus 23 ~i~~~~a~D~~sA~l~e~aGf~ai~vs~~s~a~~~~G~pD~~~vt~~em~~~~~~I~r~~--~~PviaD~d~Gyg~~~~v 100 (298)
T 3eoo_A 23 PLQVVGAITAYAAKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNAT--NLPLLVDIDTGWGGAFNI 100 (298)
T ss_dssp SEEEEECSSHHHHHHHHHHTCSCEEECHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHHC--CSCEEEECTTCSSSHHHH
T ss_pred cEEEecCCCHHHHHHHHHcCCCEEEECcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhhc--CCeEEEECCCCCCCHHHH
Confidence 444445667788999999999999998731 1 0 23556655543 33444444 78999987554 44444
Q ss_pred H---H-HHHcCcCEEEEc
Q 018519 280 F---K-ALALGASGIFIG 293 (354)
Q Consensus 280 ~---k-alalGAd~V~ig 293 (354)
. + ....||.+|.|-
T Consensus 101 ~~~v~~l~~aGaagv~iE 118 (298)
T 3eoo_A 101 ARTIRSFIKAGVGAVHLE 118 (298)
T ss_dssp HHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHhCCeEEEEC
Confidence 4 3 344899999774
No 408
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=82.46 E-value=5.9 Score=35.85 Aligned_cols=73 Identities=23% Similarity=0.242 Sum_probs=48.9
Q ss_pred cccccCCHHHHHHHHHhCCCEEEEec-CCcCCCCCCcChHHHHHHHHHHhc-CCccEE-EcCCCCCHHHHHHHHHcCcCE
Q 018519 213 SWKGVLTAEDARIAVQAGAAGIIVSN-HGARQLDYVPATIMALEEVVKATQ-GRIPVF-LDGGVRRGTDVFKALALGASG 289 (354)
Q Consensus 213 ~w~Gi~~~~~a~~~~~~G~d~I~vs~-~gg~~~~~~~~~~~~l~~i~~~~~-~~i~vi-~~GGi~~g~dv~kalalGAd~ 289 (354)
.|-.+.+++.++.+..+|+|+|+++. |+ +...+.+.....++. ...+++ =.- -.++.|+.+++..|+++
T Consensus 22 ~~~~~~~p~~~e~a~~~GaD~v~lDlE~~-------~~~~~~~~~~~~a~~~~~~~~~VRv~-~~~~~~i~~~l~~g~~~ 93 (267)
T 2vws_A 22 LWLSSTTAYMAEIAATSGYDWLLIDGEHA-------PNTIQDLYHQLQAVAPYASQPVIRPV-EGSKPLIKQVLDIGAQT 93 (267)
T ss_dssp EEECSCCHHHHHHHHTTCCSEEEEETTTS-------CCCHHHHHHHHHHHTTSSSEEEEECS-SCCHHHHHHHHHTTCCE
T ss_pred EEEeCCCHHHHHHHHhCCCCEEEEcCCCC-------CCCHHHHHHHHHHHHhCCCcEEEEeC-CCCHHHHHHHHHhCCCE
Confidence 56666799999999999999999975 33 333444444333332 123332 222 23688998888999999
Q ss_pred EEEc
Q 018519 290 IFIG 293 (354)
Q Consensus 290 V~ig 293 (354)
|++=
T Consensus 94 I~~P 97 (267)
T 2vws_A 94 LLIP 97 (267)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 9884
No 409
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=82.39 E-value=3.7 Score=37.86 Aligned_cols=83 Identities=20% Similarity=0.284 Sum_probs=53.9
Q ss_pred cccccccCCHHHHHHHHHhCCCEEEEecCC-c-C---CCCCCcChHHH-HHHHHHHhc-CCccEEEcCC--CCCHHHHH-
Q 018519 211 SLSWKGVLTAEDARIAVQAGAAGIIVSNHG-A-R---QLDYVPATIMA-LEEVVKATQ-GRIPVFLDGG--VRRGTDVF- 280 (354)
Q Consensus 211 ~~~w~Gi~~~~~a~~~~~~G~d~I~vs~~g-g-~---~~~~~~~~~~~-l~~i~~~~~-~~i~vi~~GG--i~~g~dv~- 280 (354)
++..-++.+.-.|+.+.++|+|+|.+++.+ + . ..|.++-+++. +..++...+ -++||++|.. ..++.++.
T Consensus 22 ~i~~~~a~D~~sA~i~e~aGf~ai~vs~s~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~Gyg~~~~~~~ 101 (287)
T 3b8i_A 22 CYHTASVFDPMSARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVARLPVIADADHGYGNALNVMR 101 (287)
T ss_dssp CEECEECCSHHHHHHHHHTTCSCEEECHHHHHHHHHSCCSSSCSCHHHHHHHHHHHHTTCSSCEEEECTTCSSSHHHHHH
T ss_pred cEEEecCCCHHHHHHHHHcCCCEEEeCcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCHHHHHH
Confidence 344445667788999999999999998752 1 0 23556666654 333333322 2789999865 44665554
Q ss_pred ---HHHHcCcCEEEEc
Q 018519 281 ---KALALGASGIFIG 293 (354)
Q Consensus 281 ---kalalGAd~V~ig 293 (354)
+.+..||++|.|-
T Consensus 102 ~v~~l~~aGa~gv~iE 117 (287)
T 3b8i_A 102 TVVELERAGIAALTIE 117 (287)
T ss_dssp HHHHHHHHTCSEEEEE
T ss_pred HHHHHHHhCCeEEEEc
Confidence 3445899999884
No 410
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=82.37 E-value=5.6 Score=36.39 Aligned_cols=83 Identities=16% Similarity=0.112 Sum_probs=52.7
Q ss_pred cccccccCCHHHHHHHHHhCCCEEEEecCCcC----CCCCCcChHHH-HHHHHHHhc--CCccEEEcC---CCCCHHHHH
Q 018519 211 SLSWKGVLTAEDARIAVQAGAAGIIVSNHGAR----QLDYVPATIMA-LEEVVKATQ--GRIPVFLDG---GVRRGTDVF 280 (354)
Q Consensus 211 ~~~w~Gi~~~~~a~~~~~~G~d~I~vs~~gg~----~~~~~~~~~~~-l~~i~~~~~--~~i~vi~~G---Gi~~g~dv~ 280 (354)
++..-+..+.-.|+.+.++|+|.|.+....+. ..|..+-+++. +..++...+ .+.||++|- |..++++++
T Consensus 30 ~i~m~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r~~~~~~vvaD~pfgsY~s~~~a~ 109 (275)
T 3vav_A 30 KIAMLTCYDASFAALLDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVARAQPRALIVADLPFGTYGTPADAF 109 (275)
T ss_dssp CEEEEECCSHHHHHHHHHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTCCSSEEEEECCTTSCSSHHHHH
T ss_pred cEEEEeCcCHHHHHHHHHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHHhcCCCCCEEEecCCCCCCCHHHHH
Confidence 34444556778999999999999955322211 12445666543 333333222 258899985 456788875
Q ss_pred ----HHHHcCcCEEEEc
Q 018519 281 ----KALALGASGIFIG 293 (354)
Q Consensus 281 ----kalalGAd~V~ig 293 (354)
+.+..||++|-+-
T Consensus 110 ~~a~rl~kaGa~aVklE 126 (275)
T 3vav_A 110 ASAVKLMRAGAQMVKFE 126 (275)
T ss_dssp HHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHcCCCEEEEC
Confidence 4566899999885
No 411
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=82.12 E-value=11 Score=35.40 Aligned_cols=92 Identities=11% Similarity=0.028 Sum_probs=55.6
Q ss_pred CCCceEEEEeec------CChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcc
Q 018519 121 GPGIRFFQLYVY------KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDE 194 (354)
Q Consensus 121 ~~~~~~~QLy~~------~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~ 194 (354)
..-+.++-|-+. .+.+...++++.++++|++.|.++.+.... . . .+.+ + .
T Consensus 208 v~~pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~-~-------~--~~~~---~---~-------- 263 (340)
T 3gr7_A 208 WDGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVP-A-------R--MNVY---P---G-------- 263 (340)
T ss_dssp CCSCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSC-C-------C--CCCC---T---T--------
T ss_pred cCCceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccC-C-------C--CCCC---c---c--------
Confidence 344567766432 235667788999999999999887532110 0 0 0000 0 0
Q ss_pred cchhhHHHHHhhhcCCcccccccCCHHHHHHHHHhC-CCEEEE
Q 018519 195 ANDSGLAAYVAGQIDRSLSWKGVLTAEDARIAVQAG-AAGIIV 236 (354)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~w~Gi~~~~~a~~~~~~G-~d~I~v 236 (354)
....-+.++.+....|.+.-.||.++++|+.+++.| +|.|.+
T Consensus 264 ~~~~~~~~ik~~~~iPVi~~GgI~s~e~a~~~L~~G~aD~V~i 306 (340)
T 3gr7_A 264 YQVPFAELIRREADIPTGAVGLITSGWQAEEILQNGRADLVFL 306 (340)
T ss_dssp TTHHHHHHHHHHTTCCEEEESSCCCHHHHHHHHHTTSCSEEEE
T ss_pred ccHHHHHHHHHHcCCcEEeeCCCCCHHHHHHHHHCCCeeEEEe
Confidence 001112333334445555555788999999999999 999988
No 412
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=81.98 E-value=32 Score=31.76 Aligned_cols=181 Identities=13% Similarity=0.044 Sum_probs=100.1
Q ss_pred cceEecccccccccCChhhHHHHHHHHHcCCcEEe--c---CCCCCCHHHHHh-------h-CC-CceEEEEeecCChHH
Q 018519 72 MPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--S---SWSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNV 137 (354)
Q Consensus 72 ~Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~--s---~~~~~~~eei~~-------~-~~-~~~~~QLy~~~d~~~ 137 (354)
.|.++.|+.-..-.+.++-..+.+-..+.|+..++ + +..+.+.+|-.+ . .. -+.+...- ..+...
T Consensus 29 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg-~~~t~~ 107 (315)
T 3na8_A 29 IGYTITPFAADGGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVS-DLTTAK 107 (315)
T ss_dssp EEECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHH
T ss_pred EEEeeCcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHH
Confidence 35666777432222333334666666678876544 2 233456665322 1 22 45666653 467778
Q ss_pred HHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCccccc--
Q 018519 138 VAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWK-- 215 (354)
Q Consensus 138 ~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~-- 215 (354)
..++++.|+++|++++.+. +|.. .-| +.. ....-++++.+....|.+...
T Consensus 108 ai~la~~A~~~Gadavlv~--~P~y-----------~~~---s~~------------~l~~~f~~va~a~~lPiilYn~P 159 (315)
T 3na8_A 108 TVRRAQFAESLGAEAVMVL--PISY-----------WKL---NEA------------EVFQHYRAVGEAIGVPVMLYNNP 159 (315)
T ss_dssp HHHHHHHHHHTTCSEEEEC--CCCS-----------SCC---CHH------------HHHHHHHHHHHHCSSCEEEEECH
T ss_pred HHHHHHHHHhcCCCEEEEC--CCCC-----------CCC---CHH------------HHHHHHHHHHHhCCCcEEEEeCc
Confidence 8899999999999998874 3421 101 000 011113344444444544333
Q ss_pred ---cc-CCHHHHHHH-HHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEE
Q 018519 216 ---GV-LTAEDARIA-VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGI 290 (354)
Q Consensus 216 ---Gi-~~~~~a~~~-~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V 290 (354)
|+ ++++...++ .+.. ..+-|= + ...++..+.++.+..++++.|+. |. -.-++.++++|++++
T Consensus 160 ~~tg~~l~~~~~~~L~a~~p-nIvgiK-------d-ssgd~~~~~~~~~~~~~~f~v~~-G~---D~~~l~~l~~G~~G~ 226 (315)
T 3na8_A 160 GTSGIDMSVELILRIVREVD-NVTMVK-------E-STGDIQRMHKLRLLGEGRVPFYN-GC---NPLALEAFVAGAKGW 226 (315)
T ss_dssp HHHSCCCCHHHHHHHHHHST-TEEEEE-------E-CSSCHHHHHHHHHHTTTCSCEEE-CC---GGGHHHHHHHTCSEE
T ss_pred chhCcCCCHHHHHHHHhcCC-CEEEEE-------C-CCCCHHHHHHHHHHcCCCEEEEe-Cc---hHHHHHHHHCCCCEE
Confidence 54 688888877 5532 322221 1 11234556667766655666554 32 234678899999999
Q ss_pred EEcH
Q 018519 291 FIGR 294 (354)
Q Consensus 291 ~igr 294 (354)
.-+.
T Consensus 227 is~~ 230 (315)
T 3na8_A 227 CSAA 230 (315)
T ss_dssp EESG
T ss_pred Eech
Confidence 8887
No 413
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=81.76 E-value=22 Score=33.64 Aligned_cols=233 Identities=15% Similarity=0.133 Sum_probs=113.1
Q ss_pred ccceEecccccccccCChhh--HHHHHHHHHcCCcE----EecCCCCCCHHHHHhh-C---CCceEEEEee--cCChHHH
Q 018519 71 SMPIMIAPTAMQKMAHPEGE--YATARAASAAGTIM----TLSSWSTSSVEEVAST-G---PGIRFFQLYV--YKDRNVV 138 (354)
Q Consensus 71 ~~Pi~iAPm~~~~l~~~~~e--~~la~aa~~~G~~~----~~s~~~~~~~eei~~~-~---~~~~~~QLy~--~~d~~~~ 138 (354)
..|++||=+|..- +.+-+ ..+..+|+++|... ++= +-....+++... . .+..+++.|- .-..+..
T Consensus 4 ~~~~IIAEig~NH--nGdle~Ak~lI~~A~~aGad~~~d~avK-fQt~~~d~l~~~~~~~~~~~~~~~~~~~~el~~e~~ 80 (350)
T 3g8r_A 4 SKPLFIFEMANNH--MGNVEHGVALIRAIRESCQGFDFDFGFK-LQYRNLDTFIHSSFKGRDDVKYVKRFEETRLQPEQM 80 (350)
T ss_dssp -CCEEEEECTTTT--TTCSHHHHHHHHHHHHHTTTCCSEEEEE-EEECCHHHHBCGGGTTCCSSSSHHHHHHTCCCHHHH
T ss_pred CCCEEEEEECCCc--cCcHHHHHHHHHHHHHhCCcccCCeeEE-ccccchhhhcChhccCccHHHHHHHHHHhcCCHHHH
Confidence 4699999997532 11223 36777889988741 111 111234443211 0 1111222221 1245666
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCC-cCccccccCCccCcCcccchhhHHHHHhhhcCCccccccc
Q 018519 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPP-FLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKGV 217 (354)
Q Consensus 139 ~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~Gi 217 (354)
..+.+.+++.|...+.--+|. +.-+.-..+.+|. +++..++.++ .+-+.+.+...|.+.-.|.
T Consensus 81 ~~L~~~~~~~Gi~~~st~fD~-----~svd~l~~~~v~~~KI~S~~~~N~-----------pLL~~va~~gKPviLstGm 144 (350)
T 3g8r_A 81 QKLVAEMKANGFKAICTPFDE-----ESVDLIEAHGIEIIKIASCSFTDW-----------PLLERIARSDKPVVASTAG 144 (350)
T ss_dssp HHHHHHHHHTTCEEEEEECSH-----HHHHHHHHTTCCEEEECSSSTTCH-----------HHHHHHHTSCSCEEEECTT
T ss_pred HHHHHHHHHcCCcEEeccCCH-----HHHHHHHHcCCCEEEECcccccCH-----------HHHHHHHhhCCcEEEECCC
Confidence 777778888887655432221 1112222222120 1122222221 2334455556676666687
Q ss_pred CCHHHHHHHH----HhCCCEEEEecCCcCCCCC--CcChHHHHHHHHHHhcCCccEEEc----CCCCCHHHHHHHHHcCc
Q 018519 218 LTAEDARIAV----QAGAAGIIVSNHGARQLDY--VPATIMALEEVVKATQGRIPVFLD----GGVRRGTDVFKALALGA 287 (354)
Q Consensus 218 ~~~~~a~~~~----~~G~d~I~vs~~gg~~~~~--~~~~~~~l~~i~~~~~~~i~vi~~----GGi~~g~dv~kalalGA 287 (354)
.+.++...++ +.|.+.+.+ |.-+.... ....+..++.+++..+ .+||..+ |+. . .-++.|+++||
T Consensus 145 stl~Ei~~Ave~i~~~g~~viLl--hC~s~YPt~~~~~nL~aI~~Lk~~fp-~lpVG~SdHt~g~~-~-~~~~AAvAlGA 219 (350)
T 3g8r_A 145 ARREDIDKVVSFMLHRGKDLTIM--HCVAEYPTPDDHLHLARIKTLRQQYA-GVRIGYSTHEDPDL-M-EPIMLAVAQGA 219 (350)
T ss_dssp CCHHHHHHHHHHHHTTTCCEEEE--ECCCCSSCCGGGCCTTHHHHHHHHCT-TSEEEEEECCCSSC-C-HHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEE--ecCCCCCCCcccCCHHHHHHHHHHCC-CCCEEcCCCCCCCc-c-HHHHHHHHcCC
Confidence 7888777664 357775555 33222111 1123456777776552 4788665 322 1 23457899999
Q ss_pred CEEEEcHHHHHHH--hhcCHHHH-HHHHHHHHHHHHHHHHHhCCC
Q 018519 288 SGIFIGRPVVYSL--AAEGEKGV-RRVLEMLREEFELAMALSGCR 329 (354)
Q Consensus 288 d~V~igr~~l~~~--~~~G~~gv-~~~l~~l~~el~~~m~~~G~~ 329 (354)
+ +|=+-|-..- ...+...+ -.-+..|.++++..-..+|..
T Consensus 220 ~--vIEkH~tldr~~g~D~~~Sl~P~ef~~lv~~ir~i~~alG~~ 262 (350)
T 3g8r_A 220 T--VFEKHVGLPTDQYGINNYSANPEQVRRWLAAAARALAMLGDG 262 (350)
T ss_dssp C--EEEEEBCCCBTTBCCCTTCBCHHHHHHHHHHHHHHHHHHCCT
T ss_pred C--EEEEecCcccCCCCcccccCCHHHHHHHHHHHHHHHHHcCCC
Confidence 7 4444221111 11111000 124566777777777777763
No 414
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=81.67 E-value=3.6 Score=37.23 Aligned_cols=66 Identities=23% Similarity=0.266 Sum_probs=46.4
Q ss_pred CHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEc--CCCCCH-HHHHHHHHcCcCEEEEcHH
Q 018519 219 TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD--GGVRRG-TDVFKALALGASGIFIGRP 295 (354)
Q Consensus 219 ~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~--GGi~~g-~dv~kalalGAd~V~igr~ 295 (354)
..++++...++|||.|++ + ++++.+.+.++.+.+ ++|+.+. .+-+++ -.+.+.-.+|.+.|..|..
T Consensus 170 ai~ra~a~~eAGAd~i~~--e-------~~~~~~~~~~i~~~~--~~P~n~~~~~~~~~p~~~~~eL~~lGv~~v~~~~~ 238 (255)
T 2qiw_A 170 AIKRIKLMEQAGARSVYP--V-------GLSTAEQVERLVDAV--SVPVNITAHPVDGHGAGDLATLAGLGVRRVTFGPL 238 (255)
T ss_dssp HHHHHHHHHHHTCSEEEE--C-------CCCSHHHHHHHHTTC--SSCBEEECBTTTBBTTBCHHHHHHTTCCEEECTTH
T ss_pred HHHHHHHHHHcCCcEEEE--c-------CCCCHHHHHHHHHhC--CCCEEEEecCCCCCCCCCHHHHHHcCCCEEEEHHH
Confidence 456778889999999999 3 356667888888877 5665554 333222 2344555699999999976
No 415
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=81.45 E-value=23 Score=33.78 Aligned_cols=65 Identities=6% Similarity=-0.130 Sum_probs=49.5
Q ss_pred CHHHHH----HHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcC-cCEEEEc
Q 018519 219 TAEDAR----IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIG 293 (354)
Q Consensus 219 ~~~~a~----~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalG-Ad~V~ig 293 (354)
+.++|. .+.+.|++.|- | ...+..++.+.++++.+ ++||++++.+.+..|+.+++..| +|.|++-
T Consensus 218 ~~~~A~~~~~~L~~~~i~~iE-------e-P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k 287 (394)
T 3mkc_A 218 DWYEVARLLNSIEDLELYFAE-------A-TLQHDDLSGHAKLVENT--RSRICGAEMSTTRFEAEEWITKGKVHLLQSD 287 (394)
T ss_dssp CHHHHHHHHHHTGGGCCSEEE-------S-CSCTTCHHHHHHHHHHC--SSCBEECTTCCHHHHHHHHHHTTCCSEECCC
T ss_pred CHHHHHHHHHHhhhcCCeEEE-------C-CCCchhHHHHHHHHhhC--CCCEEeCCCCCCHHHHHHHHHcCCCCeEecC
Confidence 566654 44567888774 1 11233577888888877 79999999999999999999987 8999885
No 416
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=81.28 E-value=32 Score=32.36 Aligned_cols=123 Identities=19% Similarity=0.116 Sum_probs=75.5
Q ss_pred CChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCcc
Q 018519 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (354)
Q Consensus 133 ~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (354)
.+++.+.+.++++.+.|++++-+.++..-. ..| ...+.++.+...+..+
T Consensus 142 ~~~e~~~~~a~~~~~~G~~~iK~Kvg~~~~---~~d----------------------------~~~v~avr~~~~~~~l 190 (365)
T 3ik4_A 142 GDEVHAAASAKAILARGIKSIKVKTAGVDV---AYD----------------------------LARLRAIHQAAPTAPL 190 (365)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEECCSSCH---HHH----------------------------HHHHHHHHHHSSSCCE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEeCCCCH---HHH----------------------------HHHHHHHHHhCCCCeE
Confidence 577888788888888899999988764310 000 1112233332222223
Q ss_pred ccc--ccCCHHHHHHHHH----hCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcC
Q 018519 213 SWK--GVLTAEDARIAVQ----AGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG 286 (354)
Q Consensus 213 ~w~--Gi~~~~~a~~~~~----~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalG 286 (354)
..| +-.++++|.+..+ ...+...+- | ...+..++.+.++++.. .+||.++--+.+..|+.+++..|
T Consensus 191 ~vDaN~~~~~~~A~~~~~~L~~~~~~i~~iE-----e-P~~~~d~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i~~~ 262 (365)
T 3ik4_A 191 IVDGNCGYDVERALAFCAACKAESIPMVLFE-----Q-PLPREDWAGMAQVTAQS--GFAVAADESARSAHDVLRIAREG 262 (365)
T ss_dssp EEECTTCCCHHHHHHHHHHHHHTTCCEEEEE-----C-CSCTTCHHHHHHHHHHS--SSCEEESTTCSSHHHHHHHHHHT
T ss_pred EEECCCCCCHHHHHHHHHHHhhCCCCceEEE-----C-CCCcccHHHHHHHHhhC--CCCEEECCCCCCHHHHHHHHHhC
Confidence 222 3356777653321 233333331 1 11233578888888876 79999999999999999999987
Q ss_pred -cCEEEEcH
Q 018519 287 -ASGIFIGR 294 (354)
Q Consensus 287 -Ad~V~igr 294 (354)
+|.|++--
T Consensus 263 a~d~v~ik~ 271 (365)
T 3ik4_A 263 TASVINIKL 271 (365)
T ss_dssp CCSEEEECH
T ss_pred CCCEEEEcC
Confidence 78888763
No 417
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=81.25 E-value=8.8 Score=35.41 Aligned_cols=74 Identities=20% Similarity=0.103 Sum_probs=47.8
Q ss_pred CHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHH---HHhc-CCccEEEcCCCCCHHHHHHHHHcCcCEEEEcH
Q 018519 219 TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVV---KATQ-GRIPVFLDGGVRRGTDVFKALALGASGIFIGR 294 (354)
Q Consensus 219 ~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~---~~~~-~~i~vi~~GGi~~g~dv~kalalGAd~V~igr 294 (354)
..+.|++..+.|||.|.|.+-..+......+.-+.+.++. +.+. .++||-.|. .+++-+.+|+..||+.|.=-+
T Consensus 48 a~~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~~vpiSIDT--~~~~Va~aAl~aGa~iINdVs 125 (294)
T 2y5s_A 48 ALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPLNVPLSIDT--YKPAVMRAALAAGADLINDIW 125 (294)
T ss_dssp HHHHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGGCSCEEEEC--CCHHHHHHHHHHTCSEEEETT
T ss_pred HHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhCCCeEEEEC--CCHHHHHHHHHcCCCEEEECC
Confidence 3467788999999999996533221111233333333332 3332 278888876 778888899999999887544
No 418
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=81.24 E-value=22 Score=33.90 Aligned_cols=65 Identities=9% Similarity=-0.104 Sum_probs=49.5
Q ss_pred CHHHHH----HHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcC-cCEEEEc
Q 018519 219 TAEDAR----IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIG 293 (354)
Q Consensus 219 ~~~~a~----~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalG-Ad~V~ig 293 (354)
+.++|. .+.+.|++.|- | ...+..++.+.++++.+ ++||++++.+.+..|+.+++..| +|.|++-
T Consensus 213 ~~~~A~~~~~~L~~~~i~~iE-------e-P~~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k 282 (394)
T 3mqt_A 213 DWQKARWTFRQLEDIDLYFIE-------A-CLQHDDLIGHQKLAAAI--NTRLCGAEMSTTRFEAQEWLEKTGISVVQSD 282 (394)
T ss_dssp CHHHHHHHHHHTGGGCCSEEE-------S-CSCTTCHHHHHHHHHHS--SSEEEECTTCCHHHHHHHHHHHHCCSEECCC
T ss_pred CHHHHHHHHHHHhhcCCeEEE-------C-CCCcccHHHHHHHHhhC--CCCEEeCCCcCCHHHHHHHHHcCCCCeEecC
Confidence 566654 44567888774 1 11233577888888877 89999999999999999999986 8999885
No 419
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=81.15 E-value=4.3 Score=36.70 Aligned_cols=21 Identities=29% Similarity=0.480 Sum_probs=18.5
Q ss_pred ccCCHHHHHHHHHhCCCEEEEe
Q 018519 216 GVLTAEDARIAVQAGAAGIIVS 237 (354)
Q Consensus 216 Gi~~~~~a~~~~~~G~d~I~vs 237 (354)
||.++++++.+.+ ++|+++|.
T Consensus 207 GIst~e~a~~~~~-~ADGVIVG 227 (252)
T 3tha_A 207 GIQNNQDVKRMRK-VADGVIVG 227 (252)
T ss_dssp SCCSHHHHHHHTT-TSSEEEEC
T ss_pred CcCCHHHHHHHHh-cCCEEEEC
Confidence 8999999998876 69999993
No 420
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=81.14 E-value=6.4 Score=34.73 Aligned_cols=127 Identities=17% Similarity=0.106 Sum_probs=72.2
Q ss_pred cCChHHHHHHHHHHHHcCCCEEEEec-CCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCC
Q 018519 132 YKDRNVVAQLVRRAERAGFKAIALTV-DTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDR 210 (354)
Q Consensus 132 ~~d~~~~~~~~~~a~~~G~~ai~i~v-d~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (354)
..|...+.+.++++++.|++.+.+.+ |.+ | +| ++. . ...-++++. +..+.
T Consensus 13 a~D~~~l~~~i~~~~~~Gad~ihldi~DG~------------f-vp------~~~---~------g~~~v~~lr-~~~~~ 63 (230)
T 1tqj_A 13 SADFSRLGEEIKAVDEAGADWIHVDVMDGR------------F-VP------NIT---I------GPLIVDAIR-PLTKK 63 (230)
T ss_dssp GSCGGGHHHHHHHHHHTTCSEEEEEEEBSS------------S-SS------CBC---B------CHHHHHHHG-GGCCS
T ss_pred ecCHhHHHHHHHHHHHcCCCEEEEEEEecC------------C-Cc------chh---h------hHHHHHHHH-hhcCC
Confidence 46778888999999999999987765 222 1 11 110 0 011122332 22221
Q ss_pred cccccc-cCC-HHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcC
Q 018519 211 SLSWKG-VLT-AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGAS 288 (354)
Q Consensus 211 ~~~w~G-i~~-~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd 288 (354)
++.-.= +.+ .+....+.++|+|+|++ |.... ........+..+++. .+.+..+=...|+.+.++++.-++|
T Consensus 64 ~~~vhlmv~dp~~~i~~~~~aGadgv~v--h~e~~--~~~~~~~~~~~i~~~---g~~~gv~~~p~t~~e~~~~~~~~~D 136 (230)
T 1tqj_A 64 TLDVHLMIVEPEKYVEDFAKAGADIISV--HVEHN--ASPHLHRTLCQIREL---GKKAGAVLNPSTPLDFLEYVLPVCD 136 (230)
T ss_dssp EEEEEEESSSGGGTHHHHHHHTCSEEEE--ECSTT--TCTTHHHHHHHHHHT---TCEEEEEECTTCCGGGGTTTGGGCS
T ss_pred cEEEEEEccCHHHHHHHHHHcCCCEEEE--Ccccc--cchhHHHHHHHHHHc---CCcEEEEEeCCCcHHHHHHHHhcCC
Confidence 221100 122 23467889999999999 43200 011233444444432 4445555566888889999999999
Q ss_pred EEEEcH
Q 018519 289 GIFIGR 294 (354)
Q Consensus 289 ~V~igr 294 (354)
.|.+++
T Consensus 137 ~v~~ms 142 (230)
T 1tqj_A 137 LILIMS 142 (230)
T ss_dssp EEEEES
T ss_pred EEEEEE
Confidence 999887
No 421
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=81.11 E-value=3.8 Score=35.43 Aligned_cols=71 Identities=11% Similarity=-0.016 Sum_probs=48.1
Q ss_pred CHHHHHHHHHhCCCEEEEe---cCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHH-HHHHHHcCcCEEEEcH
Q 018519 219 TAEDARIAVQAGAAGIIVS---NHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTD-VFKALALGASGIFIGR 294 (354)
Q Consensus 219 ~~~~a~~~~~~G~d~I~vs---~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~d-v~kalalGAd~V~igr 294 (354)
..+.++.+.+.|+|.+-+. ++--+....+ .+.+.++++.+ +.|+.+.+.+.+..+ +-.+..+|||.|.+..
T Consensus 18 ~~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g---~~~i~~i~~~~--~~~~~v~l~v~d~~~~i~~~~~~gad~v~vh~ 92 (220)
T 2fli_A 18 FASELARIEETDAEYVHIDIMDGQFVPNISFG---ADVVASMRKHS--KLVFDCHLMVVDPERYVEAFAQAGADIMTIHT 92 (220)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBC---HHHHHHHHTTC--CSEEEEEEESSSGGGGHHHHHHHTCSEEEEEG
T ss_pred HHHHHHHHHHcCCCEEEEEeecCCCCCccccC---HHHHHHHHHhC--CCCEEEEEeecCHHHHHHHHHHcCCCEEEEcc
Confidence 4577888899999996543 2211111111 45666666654 679999999999874 5556669999999864
No 422
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=81.08 E-value=16 Score=33.66 Aligned_cols=40 Identities=18% Similarity=0.146 Sum_probs=27.7
Q ss_pred hhhHHHHHHHHHcCCcEEecCCCCCCHHHHHhhCCCceEEEEe
Q 018519 88 EGEYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLY 130 (354)
Q Consensus 88 ~~e~~la~aa~~~G~~~~~s~~~~~~~eei~~~~~~~~~~QLy 130 (354)
++-..+.+.|++.|++++..-+...+++.+.+. .-|+||-
T Consensus 76 ~gl~~l~~~~~~~Glp~~te~~d~~~~~~l~~~---vd~~kIg 115 (292)
T 1o60_A 76 EGLKIFQELKDTFGVKIITDVHEIYQCQPVADV---VDIIQLP 115 (292)
T ss_dssp HHHHHHHHHHHHHCCEEEEECCSGGGHHHHHTT---CSEEEEC
T ss_pred HHHHHHHHHHHHcCCcEEEecCCHHHHHHHHhc---CCEEEEC
Confidence 334578888899999988765655566666553 3588883
No 423
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=80.83 E-value=11 Score=32.80 Aligned_cols=72 Identities=18% Similarity=0.094 Sum_probs=48.0
Q ss_pred ccCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCcc---EEEcCCCCCHHHHHHHHH-cCcCEEE
Q 018519 216 GVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIP---VFLDGGVRRGTDVFKALA-LGASGIF 291 (354)
Q Consensus 216 Gi~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~---vi~~GGi~~g~dv~kala-lGAd~V~ 291 (354)
|+.+++||+.+.++|+|+|-+--.... --.-+.+...++.+.++..+. |+.+- +.+.+.+... ++.|.|+
T Consensus 7 Git~~eda~~a~~~GaD~iGfif~~~S---pR~V~~~~a~~i~~~~~~~~~~VgVfvn~---~~~~i~~~~~~~~ld~vQ 80 (203)
T 1v5x_A 7 GITRLEDALLAEALGAFALGFVLAPGS---RRRIAPEAARAIGEALGPFVVRVGVFRDQ---PPEEVLRLMEEARLQVAQ 80 (203)
T ss_dssp CCCCHHHHHHHHHHTCSEEEEECCTTC---TTBCCHHHHHHHHHHSCSSSEEEEEESSC---CHHHHHHHHHHTTCSEEE
T ss_pred CCCcHHHHHHHHHcCCCEEEEEecCCC---CCcCCHHHHHHHHHhCCCCCCEEEEEeCC---CHHHHHHHHHhhCCCEEE
Confidence 889999999999999999976422111 112234666677777654333 44333 4666666665 7999999
Q ss_pred Ec
Q 018519 292 IG 293 (354)
Q Consensus 292 ig 293 (354)
+-
T Consensus 81 LH 82 (203)
T 1v5x_A 81 LH 82 (203)
T ss_dssp EC
T ss_pred EC
Confidence 84
No 424
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=80.80 E-value=7.1 Score=35.68 Aligned_cols=80 Identities=26% Similarity=0.260 Sum_probs=52.3
Q ss_pred ccccccCCHHHHHHHHHhCCCEEEEecCC--cC--CCCCCcChHHH----HHHHHHHhcCCccEEEcCCCCC---HHHHH
Q 018519 212 LSWKGVLTAEDARIAVQAGAAGIIVSNHG--AR--QLDYVPATIMA----LEEVVKATQGRIPVFLDGGVRR---GTDVF 280 (354)
Q Consensus 212 ~~w~Gi~~~~~a~~~~~~G~d~I~vs~~g--g~--~~~~~~~~~~~----l~~i~~~~~~~i~vi~~GGi~~---g~dv~ 280 (354)
+..-++.+.-.|+.+.++|+|+|.+++.+ .. ..|.++-+++. +..|.+.+ ++||++|..-.. +.++.
T Consensus 18 i~~~~a~D~~sA~~~~~aG~~ai~vsg~s~a~~~G~pD~~~vt~~em~~~~~~I~~~~--~~pviaD~d~Gyg~~~~~~~ 95 (275)
T 2ze3_A 18 FLLPNAWDVASARLLEAAGFTAIGTTSAGIAHARGRTDGQTLTRDEMGREVEAIVRAV--AIPVNADIEAGYGHAPEDVR 95 (275)
T ss_dssp EEECEESSHHHHHHHHHHTCSCEEECHHHHHHHSCCCSSSSSCHHHHHHHHHHHHHHC--SSCEEEECTTCSSSSHHHHH
T ss_pred eeEecccCHHHHHHHHHcCCCEEEECcHHHHHhCCCCCCCCCCHHHHHHHHHHHHhhc--CCCEEeecCCCCCCCHHHHH
Confidence 44445667788999999999999998631 11 13455555543 33444444 689999876653 34443
Q ss_pred ----HHHHcCcCEEEEc
Q 018519 281 ----KALALGASGIFIG 293 (354)
Q Consensus 281 ----kalalGAd~V~ig 293 (354)
+.+..||.+|.|-
T Consensus 96 ~~v~~l~~aGaagv~iE 112 (275)
T 2ze3_A 96 RTVEHFAALGVAGVNLE 112 (275)
T ss_dssp HHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHcCCcEEEEC
Confidence 4455899999873
No 425
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=80.72 E-value=3.9 Score=38.79 Aligned_cols=60 Identities=8% Similarity=0.063 Sum_probs=46.1
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEE
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFI 292 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~i 292 (354)
.+.+..+.+.|+|.|.+ |+| .++.+.+.++++. .++|+. .+.+.+++.++...|+|+|.+
T Consensus 112 ~~~~~~~~~~g~~~V~~--~~g------~~~~~~i~~~~~~---g~~v~~--~v~t~~~a~~a~~~GaD~i~v 171 (369)
T 3bw2_A 112 DAKLAVLLDDPVPVVSF--HFG------VPDREVIARLRRA---GTLTLV--TATTPEEARAVEAAGADAVIA 171 (369)
T ss_dssp HHHHHHHHHSCCSEEEE--ESS------CCCHHHHHHHHHT---TCEEEE--EESSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHhcCCCEEEE--eCC------CCcHHHHHHHHHC---CCeEEE--ECCCHHHHHHHHHcCCCEEEE
Confidence 56778889999999998 543 2345566666552 567776 478999999999999999999
No 426
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=80.67 E-value=5.7 Score=38.50 Aligned_cols=145 Identities=12% Similarity=-0.031 Sum_probs=81.5
Q ss_pred cCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-CC
Q 018519 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI-DR 210 (354)
Q Consensus 132 ~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 210 (354)
..+++.+.+.++++.+.||+++-+.++..... . +. ..-|.+.......+.. ... ......+.++.+.+. +.
T Consensus 152 ~~~~e~~~~~a~~~~~~G~~~iKlKvG~~~~~-~--~~---~~~~~~~~~~~~~~~~-~~~-~~d~e~v~avR~avG~d~ 223 (422)
T 3tji_A 152 GETLEALFASVDALIAQGYRHIRCQLGFYGGT-P--SA---LHAPDNPTPGAWFDQQ-EYM-SNTVEMFHALREKYGWKL 223 (422)
T ss_dssp ESSHHHHHHHHHHHHHTTCSEEEEEESCCCBC-G--GG---SCCCSSCCSSEECCHH-HHH-HHHHHHHHHHHHHHCSSS
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeeccCCcc-c--cc---ccccccccccccccch-hHH-HHHHHHHHHHHHHcCCCC
Confidence 46788888888888889999999998764210 0 00 0000000000000000 000 001111333333321 22
Q ss_pred ccccc--ccCCHHHHH----HHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHH
Q 018519 211 SLSWK--GVLTAEDAR----IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA 284 (354)
Q Consensus 211 ~~~w~--Gi~~~~~a~----~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kala 284 (354)
.+..+ +-.+.++|. .+.+.|++.|- |. ..+..++.+.++++.+ .+||++++-+.+..|+.+++.
T Consensus 224 ~L~vDaN~~~~~~~A~~~~~~Le~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~ll~ 293 (422)
T 3tji_A 224 HILHDVHERLFPQQAVQLAKQLEPFQPYFIE-------DI-LPPQQSAWLEQVRQQS--CVPLALGELFNNPAEWHDLIV 293 (422)
T ss_dssp EEEEECTTCSCHHHHHHHHHHHGGGCCSEEE-------CC-SCGGGGGGHHHHHHHC--CCCEEECTTCCSGGGTHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhhCCCeEE-------CC-CChhhHHHHHHHHhhC--CCCEEEeCCcCCHHHHHHHHh
Confidence 23223 335666665 44567877774 11 1123456778888876 899999999999999999999
Q ss_pred cC-cCEEEEcH
Q 018519 285 LG-ASGIFIGR 294 (354)
Q Consensus 285 lG-Ad~V~igr 294 (354)
.| +|.|++--
T Consensus 294 ~ga~d~v~~k~ 304 (422)
T 3tji_A 294 NRRIDFIRCHV 304 (422)
T ss_dssp TTCCSEECCCG
T ss_pred cCCCCEEecCc
Confidence 87 79998853
No 427
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=80.57 E-value=35 Score=31.35 Aligned_cols=183 Identities=16% Similarity=0.054 Sum_probs=94.5
Q ss_pred cceEecccccccccCChhhHHHHHHHHHcCCcEE--ecC---CCCCCHHHHHh-------h-CC-CceEEEEeecCChHH
Q 018519 72 MPIMIAPTAMQKMAHPEGEYATARAASAAGTIMT--LSS---WSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNV 137 (354)
Q Consensus 72 ~Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~--~s~---~~~~~~eei~~-------~-~~-~~~~~QLy~~~d~~~ 137 (354)
.|.++.||.-..-.+.++-..+.+-.-+.|+... .++ ..+.+.||-.+ . .+ -+.+...- ..+...
T Consensus 13 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ 91 (309)
T 3fkr_A 13 FPVVPTTFADTGDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTS-HYSTQV 91 (309)
T ss_dssp CCBCCCCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHH
T ss_pred EEeeeCCCCcCCCcCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecC-CchHHH
Confidence 3556677743222222223355555667787433 232 33456665322 1 22 45666653 467788
Q ss_pred HHHHHHHHHHcCCCEEEEecCCCCCC--chhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCcccc-
Q 018519 138 VAQLVRRAERAGFKAIALTVDTPRLG--RREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSW- 214 (354)
Q Consensus 138 ~~~~~~~a~~~G~~ai~i~vd~p~~g--~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w- 214 (354)
..++.+.|+++|++++.+. +|... .+ | +.. ....-++++.+....|.+..
T Consensus 92 ai~la~~A~~~Gadavlv~--~Pyy~~~~~----------~---s~~------------~l~~~f~~va~a~~lPiilYn 144 (309)
T 3fkr_A 92 CAARSLRAQQLGAAMVMAM--PPYHGATFR----------V---PEA------------QIFEFYARVSDAIAIPIMVQD 144 (309)
T ss_dssp HHHHHHHHHHTTCSEEEEC--CSCBTTTBC----------C---CHH------------HHHHHHHHHHHHCSSCEEEEE
T ss_pred HHHHHHHHHHcCCCEEEEc--CCCCccCCC----------C---CHH------------HHHHHHHHHHHhcCCCEEEEe
Confidence 8899999999999998874 24310 00 1 000 00111333444433343322
Q ss_pred ---ccc-CCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHH---HHHHHHcCc
Q 018519 215 ---KGV-LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTD---VFKALALGA 287 (354)
Q Consensus 215 ---~Gi-~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~d---v~kalalGA 287 (354)
.|+ ++++...++.+.-...+-|= +.....+..+.++.+..++.+..+.+ |.| .+.++++|+
T Consensus 145 ~P~tg~~l~~~~~~~La~~~pnIvgiK-------~~~~~~~~~~~~~~~~~~~~~~~~~~-----G~d~~~l~~~l~~G~ 212 (309)
T 3fkr_A 145 APASGTALSAPFLARMAREIEQVAYFX-------IETPGAANKLRELIRLGGDAIEGPWD-----GEEAITLLADLHAGA 212 (309)
T ss_dssp CGGGCCCCCHHHHHHHHHHSTTEEEEE-------ECSSSHHHHHHHHHHHHGGGCCEEEE-----CGGGTTHHHHHHTTC
T ss_pred CCCCCCCCCHHHHHHHHhhCCCEEEEE-------CCCcchHHHHHHHHHhcCCceeeecC-----CchHHHHHHHHHCCC
Confidence 254 68888888875322333221 01112345555666554333322333 444 458899999
Q ss_pred CEEEEcH
Q 018519 288 SGIFIGR 294 (354)
Q Consensus 288 d~V~igr 294 (354)
+++..+.
T Consensus 213 ~G~i~~n 219 (309)
T 3fkr_A 213 TGAMTGG 219 (309)
T ss_dssp CEECCCS
T ss_pred cEEEEhh
Confidence 9987664
No 428
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=80.46 E-value=6.3 Score=35.95 Aligned_cols=36 Identities=22% Similarity=0.154 Sum_probs=26.6
Q ss_pred HHHHhhhcCCcccccccCCHHHHHHHHHhCCCEEEE
Q 018519 201 AAYVAGQIDRSLSWKGVLTAEDARIAVQAGAAGIIV 236 (354)
Q Consensus 201 ~~~~~~~~~~~~~w~Gi~~~~~a~~~~~~G~d~I~v 236 (354)
.++.+....|.+.-.||.+.+++.+++++|||+|.+
T Consensus 234 ~~i~~~~~ipvia~GGI~~~~d~~~~l~~GAd~V~v 269 (311)
T 1ep3_A 234 HQVAQDVDIPIIGMGGVANAQDVLEMYMAGASAVAV 269 (311)
T ss_dssp HHHHTTCSSCEEECSSCCSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHhcCCCEEEECCcCCHHHHHHHHHcCCCEEEE
Confidence 333333334445445899999999999999999998
No 429
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=80.44 E-value=6.5 Score=36.65 Aligned_cols=73 Identities=21% Similarity=0.181 Sum_probs=45.0
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCC----CcChHHHHHHH---HHHhc--CCccEEEcCCCCCHHHHHHHHHcCcCEE
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDY----VPATIMALEEV---VKATQ--GRIPVFLDGGVRRGTDVFKALALGASGI 290 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~----~~~~~~~l~~i---~~~~~--~~i~vi~~GGi~~g~dv~kalalGAd~V 290 (354)
.+.|++..+.|||.|.|.+-..+.... ..+.-+.+.++ .+.+. .++||-+|. .+++-+.+|+..||+.|
T Consensus 52 l~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~vpISIDT--~~~~Va~aAl~aGa~iI 129 (314)
T 3tr9_A 52 LRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRFPQLISVDT--SRPRVMREAVNTGADMI 129 (314)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHCCSEEEEEC--SCHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhCCCeEEEeC--CCHHHHHHHHHcCCCEE
Confidence 466788899999999996543322111 12222222222 22221 268888876 78888889999999887
Q ss_pred EEcH
Q 018519 291 FIGR 294 (354)
Q Consensus 291 ~igr 294 (354)
.=-+
T Consensus 130 NDVs 133 (314)
T 3tr9_A 130 NDQR 133 (314)
T ss_dssp EETT
T ss_pred EECC
Confidence 6543
No 430
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=80.37 E-value=7.4 Score=35.81 Aligned_cols=39 Identities=21% Similarity=0.130 Sum_probs=27.5
Q ss_pred hhHHHHHHHHHcCCcEEecCCCCCCHHHHHhhCCCceEEEEe
Q 018519 89 GEYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLY 130 (354)
Q Consensus 89 ~e~~la~aa~~~G~~~~~s~~~~~~~eei~~~~~~~~~~QLy 130 (354)
|=..+.+.|++.|++++..-+...+++.+.+..+ |+|+-
T Consensus 76 GL~~L~~~~~e~Glp~~tev~d~~~v~~l~~~vd---~lkIg 114 (288)
T 3tml_A 76 GLRILSEVKRQLGLPVLTDVHSIDEIEQVASVVD---VLQTP 114 (288)
T ss_dssp HHHHHHHHHHHHCCCEEEECCSGGGHHHHHHHCS---EEEEC
T ss_pred HHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHhCC---EEEEC
Confidence 3347899999999998866555566666655533 78873
No 431
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=80.34 E-value=37 Score=31.54 Aligned_cols=179 Identities=14% Similarity=-0.031 Sum_probs=95.7
Q ss_pred ceEecccccccccCChhhHHHHHHHHHcCCcEEe--cCC---CCCCHHHHHh-------h-CC-CceEEEEeecCChHHH
Q 018519 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--SSW---STSSVEEVAS-------T-GP-GIRFFQLYVYKDRNVV 138 (354)
Q Consensus 73 Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~--s~~---~~~~~eei~~-------~-~~-~~~~~QLy~~~d~~~~ 138 (354)
|.++.|+.-..-.+.++-..+.+-..+.|+..++ ++. .+.+.||-.+ . .. -+.+...- ..+....
T Consensus 40 ~a~vTPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg-~~st~ea 118 (332)
T 2r8w_A 40 AFPITPADEAGRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIG-ALRTDEA 118 (332)
T ss_dssp ECCCCCBCTTCCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC-CSSHHHH
T ss_pred EEeeCCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHHH
Confidence 4555666322212222223555555677875543 332 3456665322 2 22 45666653 4577778
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCccccc---
Q 018519 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWK--- 215 (354)
Q Consensus 139 ~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~--- 215 (354)
.++++.|+++|++++.+. +|.. .-| +.. ....-++++.+....|.+...
T Consensus 119 i~la~~A~~~Gadavlv~--~P~Y-----------~~~---s~~------------~l~~~f~~VA~a~~lPiilYn~P~ 170 (332)
T 2r8w_A 119 VALAKDAEAAGADALLLA--PVSY-----------TPL---TQE------------EAYHHFAAVAGATALPLAIYNNPT 170 (332)
T ss_dssp HHHHHHHHHHTCSEEEEC--CCCS-----------SCC---CHH------------HHHHHHHHHHHHCSSCEEEECCHH
T ss_pred HHHHHHHHhcCCCEEEEC--CCCC-----------CCC---CHH------------HHHHHHHHHHHhcCCCEEEEeCcc
Confidence 889999999999998774 3431 101 000 001113344444444544443
Q ss_pred --cc-CCHHHHHHHHHhCCCEEE-EecCCcCCCCCCcCh----HHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCc
Q 018519 216 --GV-LTAEDARIAVQAGAAGII-VSNHGARQLDYVPAT----IMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGA 287 (354)
Q Consensus 216 --Gi-~~~~~a~~~~~~G~d~I~-vs~~gg~~~~~~~~~----~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGA 287 (354)
|+ ++++...++.+. ..|+ | .+.. .+ +..+.++.+..++++. +.+| +-.-++.++++|+
T Consensus 171 ~tg~~l~~e~~~~La~~--pnIvgi-------Kdss-gd~~~~~~~~~~l~~~~~~~f~-v~~G---~D~~~l~~l~~G~ 236 (332)
T 2r8w_A 171 TTRFTFSDELLVRLAYI--PNIRAI-------KMPL-PADADYAGELARLRPKLSDDFA-IGYS---GDWGCTDATLAGG 236 (332)
T ss_dssp HHCCCCCHHHHHHHHTS--TTEEEE-------EECC-CTTCCHHHHHHHHTTTSCTTCE-EEEC---CHHHHHHHHHTTC
T ss_pred ccCcCCCHHHHHHHHcC--CCEEEE-------EeCC-CCchhHHHHHHHHHHhcCCCEE-EEeC---chHHHHHHHHCCC
Confidence 64 688888887753 3332 2 1111 12 4555555554433443 3444 2456778899999
Q ss_pred CEEEEcH
Q 018519 288 SGIFIGR 294 (354)
Q Consensus 288 d~V~igr 294 (354)
+++.-+.
T Consensus 237 ~G~is~~ 243 (332)
T 2r8w_A 237 DTWYSVV 243 (332)
T ss_dssp SEEEESG
T ss_pred CEEEeCH
Confidence 9999886
No 432
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=80.32 E-value=4.7 Score=37.43 Aligned_cols=59 Identities=20% Similarity=0.202 Sum_probs=44.6
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEE
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFI 292 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~i 292 (354)
.+.++.+.++|+|+|.+ |++. | .+.+..+++. .++|+.+ +.+..++.++...|||++.+
T Consensus 86 ~~~~~~~~~~g~d~V~~--~~g~------p-~~~~~~l~~~---gi~vi~~--v~t~~~a~~~~~~GaD~i~v 144 (328)
T 2gjl_A 86 AEYRAAIIEAGIRVVET--AGND------P-GEHIAEFRRH---GVKVIHK--CTAVRHALKAERLGVDAVSI 144 (328)
T ss_dssp HHHHHHHHHTTCCEEEE--EESC------C-HHHHHHHHHT---TCEEEEE--ESSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHhcCCCEEEE--cCCC------c-HHHHHHHHHc---CCCEEee--CCCHHHHHHHHHcCCCEEEE
Confidence 36778889999999998 4331 2 4455555442 5788854 88999999999999999998
No 433
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=80.22 E-value=11 Score=32.80 Aligned_cols=72 Identities=13% Similarity=0.126 Sum_probs=47.8
Q ss_pred ccCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCcc---EEEcCCCCCHHHHHHHHH-cCcCEEE
Q 018519 216 GVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIP---VFLDGGVRRGTDVFKALA-LGASGIF 291 (354)
Q Consensus 216 Gi~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~---vi~~GGi~~g~dv~kala-lGAd~V~ 291 (354)
|+.++||++.+.++|+|+|-+--.... --.-+.+...++.+.++..+. |+.+- +.+.+.+... +|.|.|+
T Consensus 8 Git~~eda~~a~~~GaD~iGfif~~~S---pR~V~~~~a~~i~~~~~~~~~~VgVfvn~---~~~~i~~~~~~~~ld~vQ 81 (205)
T 1nsj_A 8 GITNLEDALFSVESGADAVGFVFYPKS---KRYISPEDARRISVELPPFVFRVGVFVNE---EPEKILDVASYVQLNAVQ 81 (205)
T ss_dssp CCCSHHHHHHHHHHTCSEEEEECCTTC---TTBCCHHHHHHHHHHSCSSSEEEEEESSC---CHHHHHHHHHHHTCSEEE
T ss_pred CCCcHHHHHHHHHcCCCEEEEEecCCC---CCcCCHHHHHHHHHhCCCCCCEEEEEeCC---CHHHHHHHHHhhCCCEEE
Confidence 899999999999999999976422111 112234666777777654333 33333 4666666665 7999999
Q ss_pred Ec
Q 018519 292 IG 293 (354)
Q Consensus 292 ig 293 (354)
+-
T Consensus 82 LH 83 (205)
T 1nsj_A 82 LH 83 (205)
T ss_dssp EC
T ss_pred EC
Confidence 94
No 434
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=80.07 E-value=8.2 Score=35.70 Aligned_cols=90 Identities=19% Similarity=0.248 Sum_probs=51.3
Q ss_pred HhhCCCceEEEEeecCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccch
Q 018519 118 ASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEAND 197 (354)
Q Consensus 118 ~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~ 197 (354)
++..+.|.++-+-...+.+...+.+++++++|++.|.++-.... .++. + ...+.
T Consensus 122 ~~~~~~pv~vKir~G~~~~~~~~~a~~l~~~G~d~i~v~g~~~~---------~~~~-~----~~~~~------------ 175 (318)
T 1vhn_A 122 RKSVSGKFSVKTRLGWEKNEVEEIYRILVEEGVDEVFIHTRTVV---------QSFT-G----RAEWK------------ 175 (318)
T ss_dssp HHHCSSEEEEEEESCSSSCCHHHHHHHHHHTTCCEEEEESSCTT---------TTTS-S----CCCGG------------
T ss_pred HHhhCCCEEEEecCCCChHHHHHHHHHHHHhCCCEEEEcCCCcc---------ccCC-C----CcCHH------------
Confidence 33334456666543333333338889999999999998632211 0111 0 00110
Q ss_pred hhHHHHHhhhcCCcccccccCCHHHHHHHHH-hCCCEEEE
Q 018519 198 SGLAAYVAGQIDRSLSWKGVLTAEDARIAVQ-AGAAGIIV 236 (354)
Q Consensus 198 ~~~~~~~~~~~~~~~~w~Gi~~~~~a~~~~~-~G~d~I~v 236 (354)
-+.++.+ ..|.+.=.||.+++++.++++ .|+|+|.+
T Consensus 176 -~i~~i~~--~ipVi~~GgI~s~~da~~~l~~~gad~V~i 212 (318)
T 1vhn_A 176 -ALSVLEK--RIPTFVSGDIFTPEDAKRALEESGCDGLLV 212 (318)
T ss_dssp -GGGGSCC--SSCEEEESSCCSHHHHHHHHHHHCCSEEEE
T ss_pred -HHHHHHc--CCeEEEECCcCCHHHHHHHHHcCCCCEEEE
Confidence 0111111 334444447999999999998 79999988
No 435
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=80.07 E-value=37 Score=31.27 Aligned_cols=182 Identities=15% Similarity=0.069 Sum_probs=101.9
Q ss_pred ceEecccccccccCChhhHHHHHHHHHcCCcEE--ecCC---CCCCHHHHH-------hhCC--CceEEEEeecCChHHH
Q 018519 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMT--LSSW---STSSVEEVA-------STGP--GIRFFQLYVYKDRNVV 138 (354)
Q Consensus 73 Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~--~s~~---~~~~~eei~-------~~~~--~~~~~QLy~~~d~~~~ 138 (354)
|.++.|+.-..-.+.++-..+.+-..+.|+... .++. .+.+.||-. +... -+.+...- ..+....
T Consensus 13 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg-~~~t~~a 91 (311)
T 3h5d_A 13 TAFITPFHEDGSINFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVG-TNDTRDS 91 (311)
T ss_dssp EECCCCBCTTSSBCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECC-CSSHHHH
T ss_pred EeeecCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CcCHHHH
Confidence 556677743322344444566777777887543 3333 345666543 2222 35666653 4577788
Q ss_pred HHHHHHHHHcCC-CEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCccccc--
Q 018519 139 AQLVRRAERAGF-KAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWK-- 215 (354)
Q Consensus 139 ~~~~~~a~~~G~-~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~-- 215 (354)
.++.+.|+++|+ +++.+. +|.. .-|. .. ....-++++.+....|.+...
T Consensus 92 i~la~~A~~~Ga~davlv~--~P~y-----------~~~s---~~------------~l~~~f~~va~a~~lPiilYn~P 143 (311)
T 3h5d_A 92 IEFVKEVAEFGGFAAGLAI--VPYY-----------NKPS---QE------------GMYQHFKAIADASDLPIIIYNIP 143 (311)
T ss_dssp HHHHHHHHHSCCCSEEEEE--CCCS-----------SCCC---HH------------HHHHHHHHHHHSCSSCEEEEECH
T ss_pred HHHHHHHHhcCCCcEEEEc--CCCC-----------CCCC---HH------------HHHHHHHHHHHhCCCCEEEEecc
Confidence 889999999997 998774 2321 1010 00 011113344444444444433
Q ss_pred ---cc-CCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEE
Q 018519 216 ---GV-LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIF 291 (354)
Q Consensus 216 ---Gi-~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~ 291 (354)
|+ ++++...++.+. ...+-+ .+.. ++..+.++.+..+++..| .+|. -.-++.++++|++++.
T Consensus 144 ~~tg~~l~~~~~~~La~~-pnIvgi-------Kdss--d~~~~~~~~~~~~~~f~v-~~G~---d~~~l~~l~~Ga~G~i 209 (311)
T 3h5d_A 144 GRVVVELTPETMLRLADH-PNIIGV-------KECT--SLANMAYLIEHKPEEFLI-YTGE---DGDAFHAMNLGADGVI 209 (311)
T ss_dssp HHHSSCCCHHHHHHHHTS-TTEEEE-------EECS--CHHHHHHHHHHCCSSCEE-EECC---GGGHHHHHHHTCCEEE
T ss_pred cccCCCCCHHHHHHHhcC-CCEEEE-------EeCC--CHHHHHHHHHHcCCCEEE-EECc---HHHHHHHHHcCCCEEE
Confidence 54 688888888764 222222 2222 466667777666545544 4442 3346788999999999
Q ss_pred EcHHHH
Q 018519 292 IGRPVV 297 (354)
Q Consensus 292 igr~~l 297 (354)
.+..-+
T Consensus 210 s~~an~ 215 (311)
T 3h5d_A 210 SVASHT 215 (311)
T ss_dssp ESTHHH
T ss_pred echhhh
Confidence 887543
No 436
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=80.05 E-value=4.8 Score=41.77 Aligned_cols=74 Identities=18% Similarity=0.100 Sum_probs=47.6
Q ss_pred CHHHHHHHHHhCCCEEEEecCCcC---C----------CCCCcC-------hHHHHHHHHHHhcCCccEEE---------
Q 018519 219 TAEDARIAVQAGAAGIIVSNHGAR---Q----------LDYVPA-------TIMALEEVVKATQGRIPVFL--------- 269 (354)
Q Consensus 219 ~~~~a~~~~~~G~d~I~vs~~gg~---~----------~~~~~~-------~~~~l~~i~~~~~~~i~vi~--------- 269 (354)
-.+-|++|.++|+|+|-|++.-|+ | -.+|-+ ..+.+..++++++.+.||.+
T Consensus 151 f~~aA~~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~pv~vrls~~~~~~ 230 (729)
T 1o94_A 151 YVDAAKRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDCAIATRFGVDTVYG 230 (729)
T ss_dssp HHHHHHHHHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEECSSC
T ss_pred HHHHHHHHHHcCCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCceEEEEEccccCcC
Confidence 346788999999999999542222 1 112322 34566667777766777654
Q ss_pred cCCCC---CHHHHHHHHHcCcCEEEE
Q 018519 270 DGGVR---RGTDVFKALALGASGIFI 292 (354)
Q Consensus 270 ~GGi~---~g~dv~kalalGAd~V~i 292 (354)
.||+. ...++++.+.-|+|++-+
T Consensus 231 ~~G~~~~~~~~~~~~~l~~~~d~~~v 256 (729)
T 1o94_A 231 PGQIEAEVDGQKFVEMADSLVDMWDI 256 (729)
T ss_dssp TTSCCTTTHHHHHHHHHGGGCSEEEE
T ss_pred CCCCCchHHHHHHHHHHHhhcCEEEE
Confidence 46775 355677888778887644
No 437
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=79.82 E-value=7.7 Score=35.73 Aligned_cols=82 Identities=24% Similarity=0.193 Sum_probs=51.9
Q ss_pred cccccccCCHHHHHHHHHhCCCEEEEecCC-c--C-CCCCCcChHHH-HHHHHHHhc-CCccEEEcCCCC--CHHHHH--
Q 018519 211 SLSWKGVLTAEDARIAVQAGAAGIIVSNHG-A--R-QLDYVPATIMA-LEEVVKATQ-GRIPVFLDGGVR--RGTDVF-- 280 (354)
Q Consensus 211 ~~~w~Gi~~~~~a~~~~~~G~d~I~vs~~g-g--~-~~~~~~~~~~~-l~~i~~~~~-~~i~vi~~GGi~--~g~dv~-- 280 (354)
++..-++.+.-.|+.+.++|+|+|.+++.+ + . ..|.++-+++. +..++...+ -++||++|..-. ++.++.
T Consensus 16 ~i~~~~a~D~~sA~~~~~aG~~ai~vs~~~~a~~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~~~~~ 95 (290)
T 2hjp_A 16 LFTAMAAHNPLVAKLAEQAGFGGIWGSGFELSASYAVPDANILSMSTHLEMMRAIASTVSIPLIADIDTGFGNAVNVHYV 95 (290)
T ss_dssp CEEEEECSSHHHHHHHHHHTCSEEEECHHHHHHHTTSCTTTCSCHHHHHHHHHHHHTTCSSCEEEECTTTTSSHHHHHHH
T ss_pred cEEEecCCCHHHHHHHHHcCCCEEEEChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCHHHHHHH
Confidence 344445667788999999999999998631 1 1 13445666653 333333222 278999986544 555444
Q ss_pred --HHHHcCcCEEEE
Q 018519 281 --KALALGASGIFI 292 (354)
Q Consensus 281 --kalalGAd~V~i 292 (354)
+.+..||.+|.|
T Consensus 96 v~~l~~aGa~gv~i 109 (290)
T 2hjp_A 96 VPQYEAAGASAIVM 109 (290)
T ss_dssp HHHHHHHTCSEEEE
T ss_pred HHHHHHhCCeEEEE
Confidence 344589999987
No 438
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=79.81 E-value=10 Score=34.67 Aligned_cols=74 Identities=14% Similarity=0.263 Sum_probs=48.8
Q ss_pred cccccCCHHHHHHHHHhCCCEEEEec-CCcCCCCCCcChHHHHHHHHHHhc-CCccEEEcCCCCCHHHHHHHHHcCcCEE
Q 018519 213 SWKGVLTAEDARIAVQAGAAGIIVSN-HGARQLDYVPATIMALEEVVKATQ-GRIPVFLDGGVRRGTDVFKALALGASGI 290 (354)
Q Consensus 213 ~w~Gi~~~~~a~~~~~~G~d~I~vs~-~gg~~~~~~~~~~~~l~~i~~~~~-~~i~vi~~GGi~~g~dv~kalalGAd~V 290 (354)
.|-.+.+++.++.+..+|+|+|+++. |+ +...+.+....+++. ...++++==--.+..|+.+++..|+++|
T Consensus 43 l~~~~~~p~~~e~a~~~GaD~v~lDlEh~-------~~~~~~~~~~l~a~~~~~~~~~VRv~~~d~~di~~~ld~ga~~I 115 (287)
T 2v5j_A 43 LWLGLSSSYSAELLAGAGFDWLLIDGEHA-------PNNVQTVLTQLQAIAPYPSQPVVRPSWNDPVQIKQLLDVGTQTL 115 (287)
T ss_dssp EEECSCCHHHHHHHHTSCCSEEEEESSSS-------SCCHHHHHHHHHHHTTSSSEEEEECSSSCHHHHHHHHHTTCCEE
T ss_pred EEEECCCHHHHHHHHhCCCCEEEEeCCCc-------cchHHHHHHHHHHHHhcCCCEEEEECCCCHHHHHHHHhCCCCEE
Confidence 56666799999999999999999975 43 333444444333332 1333332111234669989999999999
Q ss_pred EEc
Q 018519 291 FIG 293 (354)
Q Consensus 291 ~ig 293 (354)
++=
T Consensus 116 mlP 118 (287)
T 2v5j_A 116 LVP 118 (287)
T ss_dssp EES
T ss_pred EeC
Confidence 884
No 439
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=79.77 E-value=27 Score=33.18 Aligned_cols=125 Identities=16% Similarity=0.165 Sum_probs=76.6
Q ss_pred cCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-CC
Q 018519 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI-DR 210 (354)
Q Consensus 132 ~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 210 (354)
..+++.+.+.++++.+.|++++-+.++++..... .. .....+.++.+... +.
T Consensus 143 ~~~~e~~~~~a~~~~~~G~~~~K~Kvg~~~~~~~---~~------------------------~d~~~v~avR~a~G~~~ 195 (386)
T 3fv9_G 143 GDTPEAMRAKVARHRAQGFKGHSIKIGASEAEGG---PA------------------------LDAERITACLADRQPGE 195 (386)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEECCCCTTTTH---HH------------------------HHHHHHHHHTTTCCTTC
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEeccCCCCCCC---HH------------------------HHHHHHHHHHHHcCCCC
Confidence 3578888888888888999999999886521000 00 00111222222221 11
Q ss_pred ccccc--ccCCHHHHHHHHH-h--CCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHc
Q 018519 211 SLSWK--GVLTAEDARIAVQ-A--GAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL 285 (354)
Q Consensus 211 ~~~w~--Gi~~~~~a~~~~~-~--G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalal 285 (354)
.+..| +-.++++|.+..+ . +.+. .+- |. .+.++.+.++++.. .+||.++.-+.+..|+.+++..
T Consensus 196 ~L~vDaN~~~~~~~A~~~~~~l~~~~~i-~iE-----eP---~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~~~~ 264 (386)
T 3fv9_G 196 WYLADANNGLTVEHALRMLSLLPPGLDI-VLE-----AP---CASWAETKSLRARC--ALPLLLDELIQTETDLIAAIRD 264 (386)
T ss_dssp EEEEECTTCCCHHHHHHHHHHSCSSCCC-EEE-----CC---CSSHHHHHHHHTTC--CSCEEESTTCCSHHHHHHHHHT
T ss_pred eEEEECCCCCCHHHHHHHHHHhhccCCc-EEe-----cC---CCCHHHHHHHHhhC--CCCEEeCCCcCCHHHHHHHHHh
Confidence 23222 3357788766533 2 2222 231 11 12567777777655 7999999999999999999998
Q ss_pred C-cCEEEEcH
Q 018519 286 G-ASGIFIGR 294 (354)
Q Consensus 286 G-Ad~V~igr 294 (354)
| +|.|++--
T Consensus 265 ~a~d~v~~k~ 274 (386)
T 3fv9_G 265 DLCDGVGLKV 274 (386)
T ss_dssp TCCSEEEEEH
T ss_pred CCCCEEEECc
Confidence 7 89998864
No 440
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=79.69 E-value=37 Score=32.39 Aligned_cols=116 Identities=20% Similarity=0.110 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHHc-CCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCcccc
Q 018519 136 NVVAQLVRRAERA-GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSW 214 (354)
Q Consensus 136 ~~~~~~~~~a~~~-G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 214 (354)
+.+.+.++++.+. |++++-+.++... ..| ...+.++.+...+..+..
T Consensus 170 e~~~~~a~~~~~~~G~~~~K~KvG~~~----~~d----------------------------~~~v~avR~~~~~~~l~v 217 (398)
T 4dye_A 170 KAMAEHAVRVVEEGGFDAVKLKGTTDC----AGD----------------------------VAILRAVREALPGVNLRV 217 (398)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECCSCH----HHH----------------------------HHHHHHHHHHCTTSEEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEEecCCCH----HHH----------------------------HHHHHHHHHhCCCCeEEe
Confidence 5666666667777 9999998876210 111 111222222221112222
Q ss_pred c--ccCCHHHHHH----HHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcC-c
Q 018519 215 K--GVLTAEDARI----AVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-A 287 (354)
Q Consensus 215 ~--Gi~~~~~a~~----~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalG-A 287 (354)
| +-.++++|.+ +.+.|++.|- |. .+.++.+.++++.. .+||.++.-+.+..|+.+++..| +
T Consensus 218 DaN~~w~~~~A~~~~~~l~~~~i~~iE-------qP---~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~~a~ 285 (398)
T 4dye_A 218 DPNAAWSVPDSVRAGIALEELDLEYLE-------DP---CVGIEGMAQVKAKV--RIPLCTNMCVVRFEDFAPAMRLNAV 285 (398)
T ss_dssp ECTTCSCHHHHHHHHHHHGGGCCSEEE-------CC---SSHHHHHHHHHHHC--CSCEEESSSCCSGGGHHHHHHTTCC
T ss_pred eCCCCCCHHHHHHHHHHHhhcCCCEEc-------CC---CCCHHHHHHHHhhC--CCCEEeCCcCCCHHHHHHHHHhCCC
Confidence 2 3356666654 4456777663 21 11677888888876 79999999999999999999987 7
Q ss_pred CEEEEcHH
Q 018519 288 SGIFIGRP 295 (354)
Q Consensus 288 d~V~igr~ 295 (354)
|.|++--.
T Consensus 286 d~v~~k~~ 293 (398)
T 4dye_A 286 DVIHGDVY 293 (398)
T ss_dssp SEEEECHH
T ss_pred CEEEeCcc
Confidence 99988753
No 441
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=79.54 E-value=11 Score=35.50 Aligned_cols=80 Identities=14% Similarity=0.152 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhh-cCCcccc
Q 018519 136 NVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQ-IDRSLSW 214 (354)
Q Consensus 136 ~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~w 214 (354)
+...+.+++++++|+++|.++-..... ++. +.. .+.... ....-+.++.+.. ..|.+.=
T Consensus 144 ~~~~~~a~~l~~aG~d~I~V~~r~~~~---------g~~-g~~--~~~~~~--------~~~~~i~~ik~~~~~iPVian 203 (350)
T 3b0p_A 144 RGLAQSVEAMAEAGVKVFVVHARSALL---------ALS-TKA--NREIPP--------LRHDWVHRLKGDFPQLTFVTN 203 (350)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSCBC----------------------CCC--------CCHHHHHHHHHHCTTSEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEecCchhc---------ccC-ccc--ccCCCc--------ccHHHHHHHHHhCCCCeEEEE
Confidence 356778899999999999987432210 111 000 000000 0111234444443 3444544
Q ss_pred cccCCHHHHHHHHHhCCCEEEE
Q 018519 215 KGVLTAEDARIAVQAGAAGIIV 236 (354)
Q Consensus 215 ~Gi~~~~~a~~~~~~G~d~I~v 236 (354)
.||.+++++..+++ |+|+|.+
T Consensus 204 GgI~s~eda~~~l~-GaD~V~i 224 (350)
T 3b0p_A 204 GGIRSLEEALFHLK-RVDGVML 224 (350)
T ss_dssp SSCCSHHHHHHHHT-TSSEEEE
T ss_pred CCcCCHHHHHHHHh-CCCEEEE
Confidence 47999999999998 9999998
No 442
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=79.54 E-value=17 Score=34.55 Aligned_cols=65 Identities=18% Similarity=0.123 Sum_probs=48.3
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcC-cCEEEEcHH
Q 018519 221 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRP 295 (354)
Q Consensus 221 ~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalG-Ad~V~igr~ 295 (354)
+.++.+.+.|++.|- | ...+..++.+.++++.. .+||.++.-+.+..|+.+++..| +|.|++--.
T Consensus 210 ~~~~~L~~~~i~~iE-------q-P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~ 275 (385)
T 3i6e_A 210 PRVLDVAQFQPDFIE-------Q-PVRAHHFELMARLRGLT--DVPLLADESVYGPEDMVRAAHEGICDGVSIKIM 275 (385)
T ss_dssp HHHHHHHTTCCSCEE-------C-CSCTTCHHHHHHHHTTC--SSCEEESTTCCSHHHHHHHHHHTCCSEEEECHH
T ss_pred HHHHHHHhcCCCEEE-------C-CCCcccHHHHHHHHHhC--CCCEEEeCCcCCHHHHHHHHHcCCCCEEEeccc
Confidence 445566777887774 1 11233477787877765 79999999999999999999977 799988643
No 443
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=79.40 E-value=30 Score=29.79 Aligned_cols=109 Identities=15% Similarity=0.106 Sum_probs=67.7
Q ss_pred HHHHHHHHcCCcEEecCCCCCCHHHHHhhCCCceEEEEeecCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhh
Q 018519 92 ATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKN 171 (354)
Q Consensus 92 ~la~aa~~~G~~~~~s~~~~~~~eei~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~ 171 (354)
++-=.+...+..+++|+-.+ .+.. ++.. +...+|=+.--|.......++.+++...+++.+- |.
T Consensus 73 ai~fL~~~~~pdGIIsTk~~-~i~~-Ak~~-gL~tIqR~FliDS~al~~~~~~i~~~~PD~iEiL---PG---------- 136 (192)
T 3kts_A 73 AIDFLCTEICPDGIISTRGN-AIMK-AKQH-KMLAIQRLFMIDSSAYNKGVALIQKVQPDCIELL---PG---------- 136 (192)
T ss_dssp HHHHHHHTTCCSEEEESCHH-HHHH-HHHT-TCEEEEEEECCSHHHHHHHHHHHHHHCCSEEEEE---CT----------
T ss_pred HHHHHHhCCCCCEEEeCcHH-HHHH-HHHC-CCeEEEEEEEEEcchHHHHHHHHhhcCCCEEEEC---Cc----------
Confidence 33333445688888876532 1111 2222 4455554445787777778888888888888663 21
Q ss_pred ccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCcccccccCCHHHHHHHHHhCCCEEEEecC
Q 018519 172 RFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKGVLTAEDARIAVQAGAAGIIVSNH 239 (354)
Q Consensus 172 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~Gi~~~~~a~~~~~~G~d~I~vs~~ 239 (354)
. +| +-+.++.+....|.+.=.+|.+.|++..+.++||++|+.|+.
T Consensus 137 -i-~p---------------------~iI~~i~~~~~~PiIaGGlI~~~edv~~al~aGA~aVsTs~~ 181 (192)
T 3kts_A 137 -I-IP---------------------EQVQKMTQKLHIPVIAGGLIETSEQVNQVIASGAIAVTTSNK 181 (192)
T ss_dssp -T-CH---------------------HHHHHHHHHHCCCEEEESSCCSHHHHHHHHTTTEEEEEECCG
T ss_pred -h-hH---------------------HHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcCCeEEEeCCH
Confidence 0 01 113444444444544434589999999999999999999874
No 444
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=79.31 E-value=37 Score=30.84 Aligned_cols=175 Identities=14% Similarity=0.161 Sum_probs=96.3
Q ss_pred ceEecccccccccCChhhHHHHHHHHHcCCcEEe--cC---CCCCCHHHHHh-------h-CC-CceEEEEeecCChHHH
Q 018519 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--SS---WSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNVV 138 (354)
Q Consensus 73 Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~--s~---~~~~~~eei~~-------~-~~-~~~~~QLy~~~d~~~~ 138 (354)
|.++.|+.-.. .+.++-..+.+-.-+.|+...+ ++ ..+.+.||-.+ . .. -+.+...- ..+....
T Consensus 8 ~a~vTPf~~dg-iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg-~~~t~~a 85 (291)
T 3a5f_A 8 VAIITPFTNTG-VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTG-SNNTAAS 85 (291)
T ss_dssp EECCCCBCSSS-BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHH
T ss_pred eeeEcCcCCCC-cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-cccHHHH
Confidence 55667774333 4444444666666678875543 32 33456665422 1 22 45666653 4577778
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHH----HhhhcCCcccc
Q 018519 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAY----VAGQIDRSLSW 214 (354)
Q Consensus 139 ~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~w 214 (354)
.++.+.|+++|++++.+. +|.. .-| + ..++.++ .+....|.+..
T Consensus 86 i~la~~a~~~Gadavlv~--~P~y-----------~~~---s----------------~~~l~~~f~~ia~a~~lPiilY 133 (291)
T 3a5f_A 86 IAMSKWAESIGVDGLLVI--TPYY-----------NKT---T----------------QKGLVKHFKAVSDAVSTPIIIY 133 (291)
T ss_dssp HHHHHHHHHTTCSEEEEE--CCCS-----------SCC---C----------------HHHHHHHC-CTGGGCCSCEEEE
T ss_pred HHHHHHHHhcCCCEEEEc--CCCC-----------CCC---C----------------HHHHHHHHHHHHHhcCCCEEEE
Confidence 889999999999998875 3431 101 0 0112222 22222333333
Q ss_pred c-----cc-CCHHHHHHHHHhCCCEEE-EecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCc
Q 018519 215 K-----GV-LTAEDARIAVQAGAAGII-VSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGA 287 (354)
Q Consensus 215 ~-----Gi-~~~~~a~~~~~~G~d~I~-vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGA 287 (354)
. |+ ++++...++.+. ..|+ += + ...++..+.++.+..+++..| .+|. -.-++.++++|+
T Consensus 134 n~P~~tg~~l~~~~~~~La~~--pnivgiK-------~-s~gd~~~~~~~~~~~~~~f~v-~~G~---d~~~~~~l~~G~ 199 (291)
T 3a5f_A 134 NVPGRTGLNITPGTLKELCED--KNIVAVX-------E-ASGNISQIAQIKALCGDKLDI-YSGN---DDQIIPILALGG 199 (291)
T ss_dssp ECHHHHSCCCCHHHHHHHTTS--TTEEEEE-------E-CSCCHHHHHHHHHHHGGGSEE-EESC---GGGHHHHHHTTC
T ss_pred eCccccCCCCCHHHHHHHHcC--CCEEEEe-------C-CCCCHHHHHHHHHhcCCCeEE-EeCc---HHHHHHHHHCCC
Confidence 2 54 688888877653 3232 20 1 111244555666555434544 4552 234678899999
Q ss_pred CEEEEcHH
Q 018519 288 SGIFIGRP 295 (354)
Q Consensus 288 d~V~igr~ 295 (354)
+++.-+..
T Consensus 200 ~G~is~~a 207 (291)
T 3a5f_A 200 IGVISVLA 207 (291)
T ss_dssp CEEEESGG
T ss_pred CEEEecHH
Confidence 99998873
No 445
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=79.27 E-value=3.7 Score=35.62 Aligned_cols=65 Identities=28% Similarity=0.317 Sum_probs=41.2
Q ss_pred CHHHHHHHHHhCCCEEEEecCCcCCCCCCcChH----HHHHHHHHHhc-CCccEEEcCCCCCHHHHHHHHHcCcCEEEEc
Q 018519 219 TAEDARIAVQAGAAGIIVSNHGARQLDYVPATI----MALEEVVKATQ-GRIPVFLDGGVRRGTDVFKALALGASGIFIG 293 (354)
Q Consensus 219 ~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~----~~l~~i~~~~~-~~i~vi~~GGi~~g~dv~kalalGAd~V~ig 293 (354)
..+.++.+.+.|+|.|.+....+ .+..+ +.+..+.+... -.++|+.+ .++-.++++|||+|.+|
T Consensus 33 ~~~~~~~~~~~G~~~i~l~~~~~-----~~~~~~~~~~~~~~l~~~~~~~~v~v~v~------~~~~~a~~~gad~v~l~ 101 (227)
T 2tps_A 33 PVTVVQKALKGGATLYQFREKGG-----DALTGEARIKFAEKAQAACREAGVPFIVN------DDVELALNLKADGIHIG 101 (227)
T ss_dssp HHHHHHHHHHHTCSEEEECCCST-----TCCCHHHHHHHHHHHHHHHHHHTCCEEEE------SCHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHHCCCCEEEEecCCC-----CHhHHHHHHHHHHHHHHHHHHcCCeEEEc------CHHHHHHHcCCCEEEEC
Confidence 45678999999999998843221 12222 23333332221 16889887 34556778999999998
Q ss_pred H
Q 018519 294 R 294 (354)
Q Consensus 294 r 294 (354)
.
T Consensus 102 ~ 102 (227)
T 2tps_A 102 Q 102 (227)
T ss_dssp T
T ss_pred C
Confidence 5
No 446
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=79.10 E-value=8.1 Score=37.44 Aligned_cols=68 Identities=10% Similarity=-0.115 Sum_probs=48.9
Q ss_pred ccCCHHHHHH----HHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcC-cCEE
Q 018519 216 GVLTAEDARI----AVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGI 290 (354)
Q Consensus 216 Gi~~~~~a~~----~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalG-Ad~V 290 (354)
+-.+.++|.+ +.+.|++.|-- . ..+..++.+.++++.+ .+||++++-+.+..|+.+++..| +|.|
T Consensus 237 ~~~~~~~A~~~~~~L~~~~i~~iEe-------P-~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~ga~d~v 306 (426)
T 4e4f_A 237 HRLTPIEAARFGKSVEDYRLFWMED-------P-TPAENQACFRLIRQHT--VTPIAVGEVFNSIWDCKQLIEEQLIDYI 306 (426)
T ss_dssp TCSCHHHHHHHHHHTGGGCCSEEEC-------C-SCCSSGGGGHHHHTTC--CSCEEECTTCCSGGGTHHHHHTTCCSEE
T ss_pred CCCCHHHHHHHHHHHhhcCCCEEEC-------C-CChHHHHHHHHHHhcC--CCCEEeCCCcCCHHHHHHHHHcCCCCEE
Confidence 3356777654 45667777741 1 1122455677777765 79999999999999999999987 7998
Q ss_pred EEc
Q 018519 291 FIG 293 (354)
Q Consensus 291 ~ig 293 (354)
++-
T Consensus 307 ~~k 309 (426)
T 4e4f_A 307 RTT 309 (426)
T ss_dssp CCC
T ss_pred EeC
Confidence 874
No 447
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=78.88 E-value=26 Score=32.73 Aligned_cols=90 Identities=19% Similarity=0.098 Sum_probs=53.9
Q ss_pred ceEEEEee------cCChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccch
Q 018519 124 IRFFQLYV------YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEAND 197 (354)
Q Consensus 124 ~~~~QLy~------~~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~ 197 (354)
+.++-|-+ ..+.+...+++++++++|++.|.++.+.... ....|.+ + . ...
T Consensus 221 pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~---------~~~~~~~---~---~--------~~~ 277 (349)
T 3hgj_A 221 PLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVL---------RVRIPLA---P---G--------FQV 277 (349)
T ss_dssp CEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCS---------SSCCCCC---T---T--------TTH
T ss_pred eEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCc---------ccccCCC---c---c--------ccH
Confidence 46666643 1355667788899999999999887532110 0000100 0 0 001
Q ss_pred hhHHHHHhhhcCCcccccccCCHHHHHHHHHhC-CCEEEE
Q 018519 198 SGLAAYVAGQIDRSLSWKGVLTAEDARIAVQAG-AAGIIV 236 (354)
Q Consensus 198 ~~~~~~~~~~~~~~~~w~Gi~~~~~a~~~~~~G-~d~I~v 236 (354)
.-+.++.+....|.+.-.||.++++|+.+++.| +|.|.+
T Consensus 278 ~~~~~ir~~~~iPVi~~Ggi~t~e~a~~~l~~G~aD~V~i 317 (349)
T 3hgj_A 278 PFADAVRKRVGLRTGAVGLITTPEQAETLLQAGSADLVLL 317 (349)
T ss_dssp HHHHHHHHHHCCEEEECSSCCCHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHHcCceEEEECCCCCHHHHHHHHHCCCceEEEe
Confidence 112333333445555555788999999999999 999987
No 448
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=78.72 E-value=4.3 Score=38.58 Aligned_cols=74 Identities=18% Similarity=0.069 Sum_probs=44.6
Q ss_pred HHHHHHHHHhCCCEEEEecCCcC-------------CCCCCcC-------hHHHHHHHHHHhcCCccEEE--cC-C----
Q 018519 220 AEDARIAVQAGAAGIIVSNHGAR-------------QLDYVPA-------TIMALEEVVKATQGRIPVFL--DG-G---- 272 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~-------------~~~~~~~-------~~~~l~~i~~~~~~~i~vi~--~G-G---- 272 (354)
.+-|+++.++|+|+|-|.+..|+ ...+|-+ ..+.+..++++++.+ ||.+ +. +
T Consensus 164 ~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~-pv~vris~~~~~~~ 242 (365)
T 2gou_A 164 RQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAE-RVGVRLAPLTTLNG 242 (365)
T ss_dssp HHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGG-GEEEEECSSCCTTS
T ss_pred HHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCC-cEEEEEccccccCC
Confidence 46678889999999999542221 1112222 234566666767544 7776 32 1
Q ss_pred C---CC---HHHHHHHHH-cCcCEEEEcH
Q 018519 273 V---RR---GTDVFKALA-LGASGIFIGR 294 (354)
Q Consensus 273 i---~~---g~dv~kala-lGAd~V~igr 294 (354)
+ .+ ...+++.+. .|+|++-+..
T Consensus 243 ~~~~~~~~~~~~~a~~l~~~G~d~i~v~~ 271 (365)
T 2gou_A 243 TVDADPILTYTAAAALLNKHRIVYLHIAE 271 (365)
T ss_dssp CCCSSHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 1 12 234567775 8999998864
No 449
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=78.51 E-value=6.4 Score=35.55 Aligned_cols=81 Identities=23% Similarity=0.288 Sum_probs=52.4
Q ss_pred cccccccCCHHHHHHHHHhCCCEEEEecC--CcC--CCCCCcChHHH----HHHHHHHhcCCccEEEcCCCCCH----HH
Q 018519 211 SLSWKGVLTAEDARIAVQAGAAGIIVSNH--GAR--QLDYVPATIMA----LEEVVKATQGRIPVFLDGGVRRG----TD 278 (354)
Q Consensus 211 ~~~w~Gi~~~~~a~~~~~~G~d~I~vs~~--gg~--~~~~~~~~~~~----l~~i~~~~~~~i~vi~~GGi~~g----~d 278 (354)
++..-++.+.-.|+.+.++|+|+|.+++. +.. ..|.++-+++. ...|.+.+ ++||++|.....+ .-
T Consensus 21 ~i~~~~ayD~~sA~~~~~aG~dai~vg~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~--~~pviaD~~~Gyg~~~~~~ 98 (255)
T 2qiw_A 21 LLVLPTVWDTWSAGLVEEAGFSGLTIGSHPVADATGSSDGENMNFADYMAVVKKITSAV--SIPVSVDVESGYGLSPADL 98 (255)
T ss_dssp CEECCEESSHHHHHHHHHTTCSCEEECHHHHHHHTTCCTTTCSCHHHHHHHHHHHHHHC--SSCEEEECTTCTTCCHHHH
T ss_pred cEEEecCcCHHHHHHHHHcCCCEEEEChHHHHHhCCCCCCCCcCHHHHHHHHHHHHhcC--CCCEEeccCCCcCcHHHHH
Confidence 34433556777899999999999999863 110 13445555543 33344444 6999998765543 23
Q ss_pred HHHHHHcCcCEEEEc
Q 018519 279 VFKALALGASGIFIG 293 (354)
Q Consensus 279 v~kalalGAd~V~ig 293 (354)
+.+.+..||++|.|-
T Consensus 99 ~~~l~~aGa~gv~iE 113 (255)
T 2qiw_A 99 IAQILEAGAVGINVE 113 (255)
T ss_dssp HHHHHHTTCCEEEEC
T ss_pred HHHHHHcCCcEEEEC
Confidence 555666999999873
No 450
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=78.42 E-value=5.9 Score=35.79 Aligned_cols=75 Identities=21% Similarity=0.239 Sum_probs=48.4
Q ss_pred ccccc-CCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHh--cCCccEEEcCCCCCHHHHHHHHHcCcCE
Q 018519 213 SWKGV-LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAT--QGRIPVFLDGGVRRGTDVFKALALGASG 289 (354)
Q Consensus 213 ~w~Gi-~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~--~~~i~vi~~GGi~~g~dv~kalalGAd~ 289 (354)
.|-.. .+++.++++..+|+|+|+++.- .++.+.+.+.....+. .+..+++=--+. +..|+.+++..|+++
T Consensus 19 ~~~~~~~~p~~~e~a~~~g~D~vilDlE------hav~~~~k~~~~l~a~~~~~~~~~VRVn~~-~~~di~~~ld~G~~g 91 (261)
T 3qz6_A 19 TMLNLVYNPDIVRIYAEAGLDYFIVDCE------HAAYTFREINHLVSVAKNAGVSVLVRIPQV-DRAHVQRLLDIGAEG 91 (261)
T ss_dssp EEESSCCCTTHHHHHHHTTCSEEEEESS------SSCCCHHHHHHHHHHHHHHTCEEEEECSSC-CHHHHHHHHHHTCCE
T ss_pred EEEecCCCHHHHHHHhcCCcCEEEEecc------CCCCCHHHHHHHHHHHhhcCCeEEEEeCCC-CHHHHHHHHhcCCCE
Confidence 67666 7899999999999999999752 2333333332222221 122233333333 457999999999999
Q ss_pred EEEcH
Q 018519 290 IFIGR 294 (354)
Q Consensus 290 V~igr 294 (354)
|++=.
T Consensus 92 I~lP~ 96 (261)
T 3qz6_A 92 FMIPG 96 (261)
T ss_dssp EEETT
T ss_pred EEECC
Confidence 99854
No 451
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=78.37 E-value=14 Score=32.70 Aligned_cols=72 Identities=21% Similarity=0.215 Sum_probs=49.7
Q ss_pred ccCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHH-cCcCEEEEc
Q 018519 216 GVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA-LGASGIFIG 293 (354)
Q Consensus 216 Gi~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kala-lGAd~V~ig 293 (354)
|+.++||++ +.++|+|+|=+--+... --.-+.+...+|.+.. ..++...|=..+..++.+.+. +|.|.|++=
T Consensus 27 Git~~ed~~-a~~~gaD~iGfIf~~~S---pR~V~~~~A~~i~~~~--~~~~~~v~v~v~~~ei~~~i~~~~ld~vQLH 99 (228)
T 4aaj_A 27 GIKSLEELE-IVEKHADATGVVVNSNS---KRRIPLEKAREIIENS--AIPVFLVSTMVGFSEWAMAIERTGAQYIQVH 99 (228)
T ss_dssp CCCSHHHHH-HHHTTCSEEEEECSSSS---TTBCCHHHHHHHHHHC--SSCEEEEECCCCHHHHHHHHHHHTCSEEEEC
T ss_pred CCCcHHHHH-HHHcCCCEEEEEecCCC---CCCCCHHHHHHHHHhh--CCCCEEEeccCchHHHHHHHHhccchheecc
Confidence 999999986 67999999865322211 0112345556666655 567777776677888888776 799999984
No 452
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=78.08 E-value=3.3 Score=36.84 Aligned_cols=61 Identities=15% Similarity=0.277 Sum_probs=41.4
Q ss_pred HHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHH-cCcCEEEEcH
Q 018519 226 AVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA-LGASGIFIGR 294 (354)
Q Consensus 226 ~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kala-lGAd~V~igr 294 (354)
+....+|++.++..||+. ..-+|+.+..+.. +.|+|..||+ +++.|.+|+. .+..+|=+.+
T Consensus 142 ~~~~~~d~~LlDs~GGtG---~~fDW~~~~~~~~----~~p~iLAGGL-~peNV~~Ai~~~~P~gVDVsS 203 (228)
T 4aaj_A 142 ISRYNADMVLLDTGAGSG---KLHDLRVSSLVAR----KIPVIVAGGL-NAENVEEVIKVVKPYGVDVSS 203 (228)
T ss_dssp HHHSCCSEEEEEC----------CCCHHHHHHHH----HSCEEEESSC-CTTTHHHHHHHHCCSEEEESG
T ss_pred HhccCCCEEccCCCCCCc---CcCChHHHHHhhh----cCCeEEECCC-CHHHHHHHHHHhCCCEEEeCC
Confidence 345679999998877652 1123455555443 5799999999 6889999998 7988888877
No 453
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=77.96 E-value=2.8 Score=38.22 Aligned_cols=21 Identities=38% Similarity=0.370 Sum_probs=18.7
Q ss_pred cccCCHHHHHHHHHhCCCEEEEe
Q 018519 215 KGVLTAEDARIAVQAGAAGIIVS 237 (354)
Q Consensus 215 ~Gi~~~~~a~~~~~~G~d~I~vs 237 (354)
-||.++|++..+ .|+|+++|.
T Consensus 209 fGI~t~e~a~~~--~~ADgVIVG 229 (271)
T 1ujp_A 209 FGVSGKATAAQA--AVADGVVVG 229 (271)
T ss_dssp SCCCSHHHHHHH--TTSSEEEEC
T ss_pred cCCCCHHHHHHh--cCCCEEEEC
Confidence 389899999997 999999993
No 454
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=77.68 E-value=2.3 Score=38.01 Aligned_cols=62 Identities=13% Similarity=0.215 Sum_probs=43.4
Q ss_pred CCHHHHHHHHHhCCCEEEEecCCcCCCCCCcC---hHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcH
Q 018519 218 LTAEDARIAVQAGAAGIIVSNHGARQLDYVPA---TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 294 (354)
Q Consensus 218 ~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~---~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr 294 (354)
.+.+.++.+.++|+|+|.|.+. .|.. .++.+.++++ .++||+.-+...++- ..|+|++.+=.
T Consensus 21 ~t~~~~~~l~~~GaD~IelG~S------~g~t~~~~~~~v~~ir~---~~~Pivl~~y~~n~i------~~gvDg~iipd 85 (234)
T 2f6u_A 21 NTDEIIKAVADSGTDAVMISGT------QNVTYEKARTLIEKVSQ---YGLPIVVEPSDPSNV------VYDVDYLFVPT 85 (234)
T ss_dssp CCHHHHHHHHTTTCSEEEECCC------TTCCHHHHHHHHHHHTT---SCCCEEECCSSCCCC------CCCSSEEEEEE
T ss_pred ccHHHHHHHHHcCCCEEEECCC------CCCCHHHHHHHHHHhcC---CCCCEEEecCCcchh------hcCCCEEEEcc
Confidence 4678889999999999999542 2222 2334444443 379999998875433 67999999865
No 455
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=77.28 E-value=42 Score=30.42 Aligned_cols=180 Identities=17% Similarity=0.130 Sum_probs=97.5
Q ss_pred ceEecccccccccCChhhHHHHHHHHHcCCcEEe--cCC---CCCCHHHHHh-------h-CC-CceEEEEeecCChHHH
Q 018519 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--SSW---STSSVEEVAS-------T-GP-GIRFFQLYVYKDRNVV 138 (354)
Q Consensus 73 Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~--s~~---~~~~~eei~~-------~-~~-~~~~~QLy~~~d~~~~ 138 (354)
|-++.|+.-..-.+.++-..+.+-.-+.|+...+ ++. .+.+.||-.+ . .+ -+.+...- ..+....
T Consensus 7 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~a 85 (291)
T 3tak_A 7 VAIVTPMLKDGGVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTG-ANSTREA 85 (291)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHH
T ss_pred eeeECCCCCCCCcCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCC-CCCHHHH
Confidence 4556676422222223333566666677875443 332 3456665432 1 22 45666653 4577888
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCccccc---
Q 018519 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWK--- 215 (354)
Q Consensus 139 ~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~--- 215 (354)
.++++.|+++|++++.+. +|.. .-|. .. ....-++++.+....|.+...
T Consensus 86 i~la~~a~~~Gadavlv~--~P~y-----------~~~~---~~------------~l~~~f~~ia~a~~lPiilYn~P~ 137 (291)
T 3tak_A 86 IELTKAAKDLGADAALLV--TPYY-----------NKPT---QE------------GLYQHYKAIAEAVELPLILYNVPG 137 (291)
T ss_dssp HHHHHHHHHHTCSEEEEE--CCCS-----------SCCC---HH------------HHHHHHHHHHHHCCSCEEEEECHH
T ss_pred HHHHHHHHhcCCCEEEEc--CCCC-----------CCCC---HH------------HHHHHHHHHHHhcCCCEEEEeccc
Confidence 889999999999998874 3431 1010 00 011113444444444544333
Q ss_pred --cc-CCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEE
Q 018519 216 --GV-LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFI 292 (354)
Q Consensus 216 --Gi-~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~i 292 (354)
|+ ++++...++.+.. ..+-+= + ...++..+.++.+..+++..| .+|. -.-++.++++|++++.-
T Consensus 138 ~tg~~l~~~~~~~La~~p-nivgiK-------~-ssgd~~~~~~~~~~~~~~f~v-~~G~---d~~~~~~l~~G~~G~is 204 (291)
T 3tak_A 138 RTGVDLSNDTAVRLAEIP-NIVGIK-------D-ATGDVPRGKALIDALNGKMAV-YSGD---DETAWELMLLGADGNIS 204 (291)
T ss_dssp HHSCCCCHHHHHHHTTST-TEEEEE-------E-CSCCHHHHHHHHHHHTTSSEE-EECC---HHHHHHHHHTTCCEEEE
T ss_pred ccCCCCCHHHHHHHHcCC-CEEEEE-------e-CCCCHHHHHHHHHHcCCCeEE-EECc---HHHHHHHHHCCCCEEEe
Confidence 54 6888888776432 222221 1 112345566666666555655 4453 34567889999999988
Q ss_pred cH
Q 018519 293 GR 294 (354)
Q Consensus 293 gr 294 (354)
+.
T Consensus 205 ~~ 206 (291)
T 3tak_A 205 VT 206 (291)
T ss_dssp SG
T ss_pred ch
Confidence 76
No 456
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=77.16 E-value=43 Score=30.49 Aligned_cols=179 Identities=12% Similarity=0.036 Sum_probs=94.6
Q ss_pred ceEecccccccccCChhhHHHHHHHHHcCCcEEe--c---CCCCCCHHHHHh-------h-CC-CceEEEEeecCChHHH
Q 018519 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--S---SWSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNVV 138 (354)
Q Consensus 73 Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~--s---~~~~~~~eei~~-------~-~~-~~~~~QLy~~~d~~~~ 138 (354)
|.++.|| -..-.+.++-..+.+-..+.|+...+ + +..+.+.||-.+ . .. -+.+...- ..+....
T Consensus 7 ~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~a 84 (297)
T 2rfg_A 7 IAMITPF-INGQVDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAG-SNNPVEA 84 (297)
T ss_dssp EECCCCE-ETTEECHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHHH
T ss_pred EeeecCc-CCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccC-CCCHHHH
Confidence 4455565 22222333334566666678876544 3 233456665422 1 22 45666653 4577778
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCccccc---
Q 018519 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWK--- 215 (354)
Q Consensus 139 ~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~--- 215 (354)
.++.+.|+++|++++.+. +|.. .-| +.. ....-++++.+....|.+...
T Consensus 85 i~la~~A~~~Gadavlv~--~P~y-----------~~~---s~~------------~l~~~f~~va~a~~lPiilYn~P~ 136 (297)
T 2rfg_A 85 VRYAQHAQQAGADAVLCV--AGYY-----------NRP---SQE------------GLYQHFKMVHDAIDIPIIVYNIPP 136 (297)
T ss_dssp HHHHHHHHHHTCSEEEEC--CCTT-----------TCC---CHH------------HHHHHHHHHHHHCSSCEEEEECHH
T ss_pred HHHHHHHHhcCCCEEEEc--CCCC-----------CCC---CHH------------HHHHHHHHHHHhcCCCEEEEeCcc
Confidence 889999999999998874 3431 101 000 001113334444444544333
Q ss_pred --cc-CCHHHHHHHHHhCCCEEE-EecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEE
Q 018519 216 --GV-LTAEDARIAVQAGAAGII-VSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIF 291 (354)
Q Consensus 216 --Gi-~~~~~a~~~~~~G~d~I~-vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~ 291 (354)
|+ ++++...++.+. ..|+ |=-..| ++..+.++.+..+++..| .+|. -.-++.++++|++++.
T Consensus 137 ~tg~~l~~~~~~~La~~--pnIvgiKds~g--------d~~~~~~~~~~~~~~f~v-~~G~---d~~~l~~l~~G~~G~i 202 (297)
T 2rfg_A 137 RAVVDIKPETMARLAAL--PRIVGVKDATT--------DLARISRERMLINKPFSF-LSGD---DMTAIAYNASGGQGCI 202 (297)
T ss_dssp HHSCCCCHHHHHHHHTS--TTEEEEEECSC--------CTTHHHHHHTTCCSCCEE-EESC---GGGHHHHHHTTCCEEE
T ss_pred ccCCCCCHHHHHHHHcC--CCEEEEEeCCC--------CHHHHHHHHHhcCCCEEE-EeCc---HHHHHHHHHCCCCEEE
Confidence 64 688888887653 3332 211111 123344555444434444 4553 2346788999999999
Q ss_pred EcHH
Q 018519 292 IGRP 295 (354)
Q Consensus 292 igr~ 295 (354)
-+..
T Consensus 203 s~~a 206 (297)
T 2rfg_A 203 SVSA 206 (297)
T ss_dssp ESGG
T ss_pred ecHH
Confidence 8873
No 457
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=77.12 E-value=43 Score=30.44 Aligned_cols=180 Identities=17% Similarity=0.137 Sum_probs=97.5
Q ss_pred ceEecccccccccCChhhHHHHHHHHHcCCcEEe--cCC---CCCCHHHHHh-------hCC--CceEEEEeecCChHHH
Q 018519 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--SSW---STSSVEEVAS-------TGP--GIRFFQLYVYKDRNVV 138 (354)
Q Consensus 73 Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~--s~~---~~~~~eei~~-------~~~--~~~~~QLy~~~d~~~~ 138 (354)
|.++.|+.-..-.+.++-..+.+-..+.|+...+ ++. .+.+.||-.+ ... -+.+...- ..+....
T Consensus 9 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~a 87 (294)
T 3b4u_A 9 AALTTPFKTDGTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVL-VDSIEDA 87 (294)
T ss_dssp EECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEEC-CSSHHHH
T ss_pred EEEECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CccHHHH
Confidence 4455666322212222233566666678875543 332 3456665432 222 35666653 4577788
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhh---cCCccccc
Q 018519 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQ---IDRSLSWK 215 (354)
Q Consensus 139 ~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~w~ 215 (354)
.++.+.|+++|++++.+. .|.. . + ..+.. ....-++++.+.. ..|.+...
T Consensus 88 i~la~~A~~~Gadavlv~--~P~y-----------~-~-~~s~~------------~l~~~f~~va~a~p~~~lPiilYn 140 (294)
T 3b4u_A 88 ADQSAEALNAGARNILLA--PPSY-----------F-K-NVSDD------------GLFAWFSAVFSKIGKDARDILVYN 140 (294)
T ss_dssp HHHHHHHHHTTCSEEEEC--CCCS-----------S-C-SCCHH------------HHHHHHHHHHHHHCTTCCCEEEEE
T ss_pred HHHHHHHHhcCCCEEEEc--CCcC-----------C-C-CCCHH------------HHHHHHHHHHHhcCCCCCcEEEEE
Confidence 889999999999998874 3431 1 1 00000 0111134444444 34544433
Q ss_pred -----cc-CCHHHHHHHH-HhC--CCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcC
Q 018519 216 -----GV-LTAEDARIAV-QAG--AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG 286 (354)
Q Consensus 216 -----Gi-~~~~~a~~~~-~~G--~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalG 286 (354)
|+ ++++...++. +.. +-+|.-+ ..++..+.++.+..+ +..| .+|. ..-++.++++|
T Consensus 141 ~P~~tg~~l~~~~~~~La~~~pn~ivgiKds----------~gd~~~~~~~~~~~~-~f~v-~~G~---d~~~l~~l~~G 205 (294)
T 3b4u_A 141 IPSVTMVTLSVELVGRLKAAFPGIVTGVKDS----------SGNWSHTERLLKEHG-DLAI-LIGD---ERDLARGVRLG 205 (294)
T ss_dssp CHHHHSCCCCHHHHHHHHHHCTTTEEEEEEC----------CCCHHHHHHHHHHHT-TSEE-EECC---HHHHHHHHHTT
T ss_pred CcchhCcCCCHHHHHHHHHhCCCcEEEEEEC----------CCCHHHHHHHHHhCC-CeEE-EEcc---HHHHHHHHHCC
Confidence 64 6888888887 542 2233321 112455556666554 4444 4442 34567889999
Q ss_pred cCEEEEcHH
Q 018519 287 ASGIFIGRP 295 (354)
Q Consensus 287 Ad~V~igr~ 295 (354)
++++.-+..
T Consensus 206 ~~G~is~~~ 214 (294)
T 3b4u_A 206 GQGAISGVA 214 (294)
T ss_dssp CCEEEESGG
T ss_pred CCEEEeCHH
Confidence 999998863
No 458
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=77.08 E-value=13 Score=35.23 Aligned_cols=74 Identities=12% Similarity=0.096 Sum_probs=45.1
Q ss_pred HHHHHHHHHhCCCEEEEecCCcC---C----------CCCCcC-------hHHHHHHHHHHhcCCccEEE--cCC--CC-
Q 018519 220 AEDARIAVQAGAAGIIVSNHGAR---Q----------LDYVPA-------TIMALEEVVKATQGRIPVFL--DGG--VR- 274 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~---~----------~~~~~~-------~~~~l~~i~~~~~~~i~vi~--~GG--i~- 274 (354)
.+.|+++.++|+|+|-|.+..|+ | -.+|-+ ..+.+..++++++.+ ||.+ +.+ ..
T Consensus 164 ~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~-~v~vrls~~~~~~~ 242 (364)
T 1vyr_A 164 RQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSAD-RIGIRVSPIGTFQN 242 (364)
T ss_dssp HHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGG-GEEEEECCSSCBTT
T ss_pred HHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCC-cEEEEEcccccccc
Confidence 46778899999999999542222 1 112222 234566666766545 7777 322 11
Q ss_pred ------C---HHHHHHHHH-cCcCEEEEcH
Q 018519 275 ------R---GTDVFKALA-LGASGIFIGR 294 (354)
Q Consensus 275 ------~---g~dv~kala-lGAd~V~igr 294 (354)
+ ...+++.|. .|+|++-+..
T Consensus 243 ~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~ 272 (364)
T 1vyr_A 243 VDNGPNEEADALYLIEELAKRGIAYLHMSE 272 (364)
T ss_dssp BCCCTTHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred ccCCCCCHHHHHHHHHHHHHhCCCEEEEec
Confidence 2 233577776 8999998864
No 459
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=77.05 E-value=14 Score=34.98 Aligned_cols=90 Identities=17% Similarity=-0.009 Sum_probs=52.8
Q ss_pred ceEEEEeec-------CChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccc
Q 018519 124 IRFFQLYVY-------KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEAN 196 (354)
Q Consensus 124 ~~~~QLy~~-------~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~ 196 (354)
+.++-|-.. .+.+...++++.++++|++.|.++....... ...|.+ . . ..
T Consensus 227 pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~---------~~~~~~--~----~--------~~ 283 (363)
T 3l5l_A 227 PLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPD---------TNIPWG--P----A--------FM 283 (363)
T ss_dssp CEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSC---------CCCCCC--T----T--------TT
T ss_pred eEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccc---------cccCCC--c----c--------hh
Confidence 466665431 2334566778888999999998876432110 000100 0 0 00
Q ss_pred hhhHHHHHhhhcCCcccccccCCHHHHHHHHHhC-CCEEEE
Q 018519 197 DSGLAAYVAGQIDRSLSWKGVLTAEDARIAVQAG-AAGIIV 236 (354)
Q Consensus 197 ~~~~~~~~~~~~~~~~~w~Gi~~~~~a~~~~~~G-~d~I~v 236 (354)
..-++.+.+....|.+.-.||.++++|+.+++.| +|.|.+
T Consensus 284 ~~~~~~ir~~~~iPVi~~GgI~s~e~a~~~l~~G~aD~V~i 324 (363)
T 3l5l_A 284 GPIAERVRREAKLPVTSAWGFGTPQLAEAALQANQLDLVSV 324 (363)
T ss_dssp HHHHHHHHHHHTCCEEECSSTTSHHHHHHHHHTTSCSEEEC
T ss_pred HHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHCCCccEEEe
Confidence 1112333333445656555788999999999999 999977
No 460
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=77.04 E-value=1.5 Score=40.74 Aligned_cols=61 Identities=28% Similarity=0.474 Sum_probs=44.3
Q ss_pred HHHHHHhCCC----EEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCC--HHHHH----HHHH-cCcCEEE
Q 018519 223 ARIAVQAGAA----GIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR--GTDVF----KALA-LGASGIF 291 (354)
Q Consensus 223 a~~~~~~G~d----~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~--g~dv~----kala-lGAd~V~ 291 (354)
++.+.+.|+| .|.+- .+ +.+.++.+.+ .+||++.||=.+ .++++ +++. .||.++.
T Consensus 206 aRiAaELGADs~~tivK~~-----------y~-e~f~~Vv~a~--~vPVViaGG~k~~~~~e~L~~v~~A~~~aGa~Gv~ 271 (307)
T 3fok_A 206 VAIAAGLGNDSSYTWMKLP-----------VV-EEMERVMEST--TMPTLLLGGEGGNDPDATFASWEHALTLPGVRGLT 271 (307)
T ss_dssp HHHHHTCSSCCSSEEEEEE-----------CC-TTHHHHGGGC--SSCEEEECCSCC--CHHHHHHHHHHTTSTTEEEEE
T ss_pred HHHHHHhCCCcCCCEEEeC-----------Cc-HHHHHHHHhC--CCCEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEe
Confidence 4566788999 88871 11 3456777666 799999999884 45665 5667 5999999
Q ss_pred EcHHHH
Q 018519 292 IGRPVV 297 (354)
Q Consensus 292 igr~~l 297 (354)
+||-+.
T Consensus 272 vGRNIf 277 (307)
T 3fok_A 272 VGRTLL 277 (307)
T ss_dssp ECTTTS
T ss_pred echhhc
Confidence 999654
No 461
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=76.95 E-value=5.7 Score=38.19 Aligned_cols=41 Identities=24% Similarity=0.485 Sum_probs=31.3
Q ss_pred hHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEc
Q 018519 250 TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 293 (354)
Q Consensus 250 ~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~ig 293 (354)
+++.+.++++.. ++||++= |+.+.+|+.++..+|||+|.+.
T Consensus 240 ~~~~i~~lr~~~--~~PvivK-gv~~~e~A~~a~~aGad~I~vs 280 (392)
T 2nzl_A 240 SWEDIKWLRRLT--SLPIVAK-GILRGDDAREAVKHGLNGILVS 280 (392)
T ss_dssp CHHHHHHHC--C--CSCEEEE-EECCHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHHhh--CCCEEEE-ecCCHHHHHHHHHcCCCEEEeC
Confidence 455566666555 6899887 4789999999999999999993
No 462
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=76.91 E-value=14 Score=32.53 Aligned_cols=37 Identities=14% Similarity=0.102 Sum_probs=24.6
Q ss_pred HHHHHhhhcCCcccccccCCHHHHHHHHHhCCCEEEE
Q 018519 200 LAAYVAGQIDRSLSWKGVLTAEDARIAVQAGAAGIIV 236 (354)
Q Consensus 200 ~~~~~~~~~~~~~~w~Gi~~~~~a~~~~~~G~d~I~v 236 (354)
++++.+......+..+|=.+++.+..+.++|||.+++
T Consensus 160 i~~lr~~~~~~~I~VdGGI~~~t~~~~~~aGAd~~Vv 196 (228)
T 3ovp_A 160 VHWLRTQFPSLDIEVDGGVGPDTVHKCAEAGANMIVS 196 (228)
T ss_dssp HHHHHHHCTTCEEEEESSCSTTTHHHHHHHTCCEEEE
T ss_pred HHHHHHhcCCCCEEEeCCcCHHHHHHHHHcCCCEEEE
Confidence 4444433222334455324789999999999999998
No 463
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=76.87 E-value=1.9 Score=38.77 Aligned_cols=65 Identities=17% Similarity=0.261 Sum_probs=42.8
Q ss_pred CCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcH
Q 018519 218 LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 294 (354)
Q Consensus 218 ~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr 294 (354)
.+.+.++.+.++|+|+|.+.+..|.. -...++.+.++++ . ++||+.-++..+.- ..|+|++.+=.
T Consensus 21 ~t~~~~~~l~~~GaD~ielG~S~Gvt---~~~~~~~v~~ir~-~--~~Pivlm~y~~n~i------~~G~dg~iiPd 85 (240)
T 1viz_A 21 LPDEQLEILCESGTDAVIIGGSDGVT---EDNVLRMMSKVRR-F--LVPCVLEVSAIEAI------VPGFDLYFIPS 85 (240)
T ss_dssp CCHHHHHHHHTSCCSEEEECC----C---HHHHHHHHHHHTT-S--SSCEEEECSCGGGC------CSCCSEEEEEE
T ss_pred ccHHHHHHHHHcCCCEEEECCCCCCC---HHHHHHHHHHhhC-c--CCCEEEecCccccc------cCCCCEEEEcc
Confidence 46788899999999999995422211 0113344555544 3 79999988885332 67999998865
No 464
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=76.72 E-value=47 Score=30.63 Aligned_cols=182 Identities=14% Similarity=0.061 Sum_probs=99.2
Q ss_pred cceEecccccccccCChhhHHHHHHHHHcCCcEEe--cCC---CCCCHHHHHh-------h-CC-CceEEEEeecCChHH
Q 018519 72 MPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--SSW---STSSVEEVAS-------T-GP-GIRFFQLYVYKDRNV 137 (354)
Q Consensus 72 ~Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~--s~~---~~~~~eei~~-------~-~~-~~~~~QLy~~~d~~~ 137 (354)
.|.++.|+.-..-.+.++-..+.+-.-+.|+...+ ++. .+.+.+|-.+ . .. -+.+...- ..+...
T Consensus 27 ~~alvTPf~~dg~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg-~~st~~ 105 (315)
T 3si9_A 27 VTALITPFDDNGAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAG-SNSTSE 105 (315)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHH
T ss_pred eEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHH
Confidence 35566776422212222334566666678875544 322 3456665322 1 22 45666653 467788
Q ss_pred HHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCccccc--
Q 018519 138 VAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWK-- 215 (354)
Q Consensus 138 ~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~-- 215 (354)
..++.+.|+++|++++.+. +|.. .-|. .. ....-++++.+....|.+...
T Consensus 106 ai~la~~A~~~Gadavlv~--~P~y-----------~~~~---~~------------~l~~~f~~va~a~~lPiilYn~P 157 (315)
T 3si9_A 106 AVELAKHAEKAGADAVLVV--TPYY-----------NRPN---QR------------GLYTHFSSIAKAISIPIIIYNIP 157 (315)
T ss_dssp HHHHHHHHHHTTCSEEEEE--CCCS-----------SCCC---HH------------HHHHHHHHHHHHCSSCEEEEECH
T ss_pred HHHHHHHHHhcCCCEEEEC--CCCC-----------CCCC---HH------------HHHHHHHHHHHcCCCCEEEEeCc
Confidence 8899999999999998875 3431 1010 00 011113444444444544443
Q ss_pred ---cc-CCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEE
Q 018519 216 ---GV-LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIF 291 (354)
Q Consensus 216 ---Gi-~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~ 291 (354)
|+ ++++...++.+.-...+-|=-.. .++..+.++.+..+++..| .+|. -.-++.++++|++++.
T Consensus 158 ~~tg~~l~~~~~~~La~~~pnIvgiKdss--------gd~~~~~~l~~~~~~~f~v-~~G~---d~~~l~~l~~G~~G~i 225 (315)
T 3si9_A 158 SRSVIDMAVETMRDLCRDFKNIIGVKDAT--------GKIERASEQREKCGKDFVQ-LSGD---DCTALGFNAHGGVGCI 225 (315)
T ss_dssp HHHSCCCCHHHHHHHHHHCTTEEEEEECS--------CCTHHHHHHHHHHCSSSEE-EESC---GGGHHHHHHTTCCEEE
T ss_pred hhhCCCCCHHHHHHHHhhCCCEEEEEeCC--------CCHHHHHHHHHHcCCCeEE-EecC---HHHHHHHHHcCCCEEE
Confidence 54 68888888877222333221111 1234455666666556655 4553 3346788999999999
Q ss_pred EcH
Q 018519 292 IGR 294 (354)
Q Consensus 292 igr 294 (354)
-+.
T Consensus 226 s~~ 228 (315)
T 3si9_A 226 SVS 228 (315)
T ss_dssp ESG
T ss_pred ecH
Confidence 876
No 465
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=76.41 E-value=29 Score=32.79 Aligned_cols=66 Identities=17% Similarity=0.155 Sum_probs=49.8
Q ss_pred ccCCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHH----cCcCEEE
Q 018519 216 GVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA----LGASGIF 291 (354)
Q Consensus 216 Gi~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kala----lGAd~V~ 291 (354)
-+++.+.+..+.+.|+|.+.|. .+ ....+..|..+.+ .+.|||.+-|..|-+++..|+. .|.+.+.
T Consensus 97 t~fD~~svd~l~~~~v~~~KI~---S~----~~~N~pLL~~va~---~gKPviLstGmstl~Ei~~Ave~i~~~g~~viL 166 (350)
T 3g8r_A 97 TPFDEESVDLIEAHGIEIIKIA---SC----SFTDWPLLERIAR---SDKPVVASTAGARREDIDKVVSFMLHRGKDLTI 166 (350)
T ss_dssp EECSHHHHHHHHHTTCCEEEEC---SS----STTCHHHHHHHHT---SCSCEEEECTTCCHHHHHHHHHHHHTTTCCEEE
T ss_pred ccCCHHHHHHHHHcCCCEEEEC---cc----cccCHHHHHHHHh---hCCcEEEECCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 4578999999999999999992 11 2344667776664 2789999999999999988765 3666444
No 466
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=76.36 E-value=45 Score=30.26 Aligned_cols=181 Identities=13% Similarity=0.108 Sum_probs=93.9
Q ss_pred ceEecccccccccCChhhHHHHHHHHHcCCcEEe--cCC---CCCCHHHHHh-------h-CC-CceEEEEeecCChHHH
Q 018519 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--SSW---STSSVEEVAS-------T-GP-GIRFFQLYVYKDRNVV 138 (354)
Q Consensus 73 Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~--s~~---~~~~~eei~~-------~-~~-~~~~~QLy~~~d~~~~ 138 (354)
|.++.|+.-..-.+.++-..+.+-..+.|+...+ ++. .+.+.||-.+ . .. -+.+...- ..+....
T Consensus 7 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~a 85 (292)
T 2ojp_A 7 VAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTG-ANATAEA 85 (292)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHH
T ss_pred eeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CccHHHH
Confidence 4556666322212222233555555677875543 332 3456665322 1 22 35666653 3566777
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCccccc---
Q 018519 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWK--- 215 (354)
Q Consensus 139 ~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~--- 215 (354)
.++.+.|+++|++++.+. +|.. .-| +.. ....-++++.+....|.+...
T Consensus 86 i~la~~a~~~Gadavlv~--~P~y-----------~~~---s~~------------~l~~~f~~ia~a~~lPiilYn~P~ 137 (292)
T 2ojp_A 86 ISLTQRFNDSGIVGCLTV--TPYY-----------NRP---SQE------------GLYQHFKAIAEHTDLPQILYNVPS 137 (292)
T ss_dssp HHHHHHTTTSSCSEEEEE--CCCS-----------SCC---CHH------------HHHHHHHHHHTTCSSCEEEECCHH
T ss_pred HHHHHHHHhcCCCEEEEC--CCCC-----------CCC---CHH------------HHHHHHHHHHHhcCCCEEEEeCcc
Confidence 788888999999998775 3431 101 000 001112333443334444333
Q ss_pred --cc-CCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEE
Q 018519 216 --GV-LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFI 292 (354)
Q Consensus 216 --Gi-~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~i 292 (354)
|+ ++++...++.+. ..|+- -.+. ..++..+.++.+..+++..| .+|. -.-++.++++|++++.-
T Consensus 138 ~tg~~l~~~~~~~La~~--pnivg------iK~s-~gd~~~~~~~~~~~~~~f~v-~~G~---d~~~~~~l~~G~~G~is 204 (292)
T 2ojp_A 138 RTGCDLLPETVGRLAKV--KNIIG------IXEA-TGNLTRVNQIKELVSDDFVL-LSGD---DASALDFMQYGGHGVIS 204 (292)
T ss_dssp HHSCCCCHHHHHHHHTS--TTEEE------C-CC-SCCTHHHHHHHTTSCTTSBC-EESC---GGGHHHHHHTTCCEEEE
T ss_pred hhccCCCHHHHHHHHcC--CCEEE------EeCC-CCCHHHHHHHHHhcCCCEEE-EECc---HHHHHHHHHCCCcEEEe
Confidence 54 688888887653 33321 0111 12234455555544444544 3442 23467889999999998
Q ss_pred cHH
Q 018519 293 GRP 295 (354)
Q Consensus 293 gr~ 295 (354)
+..
T Consensus 205 ~~~ 207 (292)
T 2ojp_A 205 VTA 207 (292)
T ss_dssp SGG
T ss_pred CHH
Confidence 873
No 467
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=76.16 E-value=5.3 Score=37.24 Aligned_cols=59 Identities=15% Similarity=0.168 Sum_probs=43.7
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEE
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFI 292 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~i 292 (354)
.+.+..+.++|+|+|.+ |+|. | .+.+..+++. .+||+.. +.+.+++.++...|+|++.+
T Consensus 78 ~~~~~~a~~~g~d~V~~--~~g~-----p--~~~i~~l~~~---g~~v~~~--v~~~~~a~~~~~~GaD~i~v 136 (332)
T 2z6i_A 78 EDIVDLVIEEGVKVVTT--GAGN-----P--SKYMERFHEA---GIIVIPV--VPSVALAKRMEKIGADAVIA 136 (332)
T ss_dssp HHHHHHHHHTTCSEEEE--CSSC-----G--GGTHHHHHHT---TCEEEEE--ESSHHHHHHHHHTTCSCEEE
T ss_pred HHHHHHHHHCCCCEEEE--CCCC-----h--HHHHHHHHHc---CCeEEEE--eCCHHHHHHHHHcCCCEEEE
Confidence 46678899999999998 5442 1 2344445442 5788754 78899988888899999999
No 468
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=75.97 E-value=8.9 Score=35.09 Aligned_cols=73 Identities=22% Similarity=0.100 Sum_probs=42.1
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHH---HHHHhc-CCccEEEcCCCCCHHHHHHHHHcCcCEEEEcH
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEE---VVKATQ-GRIPVFLDGGVRRGTDVFKALALGASGIFIGR 294 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~---i~~~~~-~~i~vi~~GGi~~g~dv~kalalGAd~V~igr 294 (354)
.+.|++..+.|||.|.|.+-..+......+.-+.+.+ +.+.+. .++||-+|. .+++-+.+|+..||+.|.=-+
T Consensus 32 ~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~~~piSIDT--~~~~va~aAl~aGa~iINdvs 108 (280)
T 1eye_A 32 VKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQGITVSIDT--MRADVARAALQNGAQMVNDVS 108 (280)
T ss_dssp HHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHTTCCEEEEC--SCHHHHHHHHHTTCCEEEETT
T ss_pred HHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcCCCEEEEeC--CCHHHHHHHHHcCCCEEEECC
Confidence 3567788999999999965321111011111222222 222221 268888876 788888899999999887544
No 469
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=75.87 E-value=18 Score=34.05 Aligned_cols=62 Identities=13% Similarity=0.043 Sum_probs=46.9
Q ss_pred HHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcC-cCEEEEcH
Q 018519 223 ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGR 294 (354)
Q Consensus 223 a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalG-Ad~V~igr 294 (354)
++.+.+.|++.|- | ...+..++.+.++++.. .+||+++.-+.+..|+.+.+..| +|.|++--
T Consensus 208 ~~~l~~~~i~~iE-------q-P~~~~~~~~~~~l~~~~--~iPia~dE~~~~~~~~~~~~~~~~~d~v~~k~ 270 (370)
T 1chr_A 208 IPELEALGVELIE-------Q-PVGRENTQALRRLSDNN--RVAIMADESLSTLASAFDLARDRSVDVFSLKL 270 (370)
T ss_dssp THHHHTTTEEEEE-------C-CSCTTCHHHHHHHHHHS--CSEEEESSSCCSHHHHHHHHTTTSCSEEEECT
T ss_pred HHHHHhcCCCEEE-------C-CCCcccHHHHHHHHhhC--CCCEEeCCCcCCHHHHHHHHHcCCCCEEEECc
Confidence 4456667776663 1 11233567788888876 89999999999999999999986 89999853
No 470
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=75.86 E-value=33 Score=30.47 Aligned_cols=27 Identities=26% Similarity=0.380 Sum_probs=22.4
Q ss_pred CCcccccccCCHHHHHHHHHhCCCEEEE
Q 018519 209 DRSLSWKGVLTAEDARIAVQAGAAGIIV 236 (354)
Q Consensus 209 ~~~~~w~Gi~~~~~a~~~~~~G~d~I~v 236 (354)
.|.+.-.|| +++++..+.++|+|+|.|
T Consensus 192 iPvvAiGGI-~~~ni~~~~~aGa~gvav 218 (243)
T 3o63_A 192 KPWFAIGGI-NAQRLPAVLDAGARRIVV 218 (243)
T ss_dssp CCEEEESSC-CTTTHHHHHHTTCCCEEE
T ss_pred CCEEEecCC-CHHHHHHHHHcCCCEEEE
Confidence 455555587 899999999999999998
No 471
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=75.82 E-value=3.9 Score=37.81 Aligned_cols=81 Identities=22% Similarity=0.185 Sum_probs=47.9
Q ss_pred cccccccCCHHHHHHHHHhCCCEEEEecCC-cC---CCCCCcChHH-HH---HHHHHHhcCCccEEEcCCC--CCHHHHH
Q 018519 211 SLSWKGVLTAEDARIAVQAGAAGIIVSNHG-AR---QLDYVPATIM-AL---EEVVKATQGRIPVFLDGGV--RRGTDVF 280 (354)
Q Consensus 211 ~~~w~Gi~~~~~a~~~~~~G~d~I~vs~~g-g~---~~~~~~~~~~-~l---~~i~~~~~~~i~vi~~GGi--~~g~dv~ 280 (354)
++..-++.+.-.|+.+.++|+|+|.+|+.+ +. ..|.++-+++ .+ ..|.+.. ++||++|..- .+..++.
T Consensus 20 ~i~~~~a~D~~sA~~~~~aG~~ai~vsg~~~a~~lG~pD~~~vt~~em~~~~~~I~~~~--~~PviaD~d~Gyg~~~~v~ 97 (295)
T 1s2w_A 20 LEFIMEAHNGLSARIVQEAGFKGIWGSGLSVSAQLGVRDSNEASWTQVVEVLEFMSDAS--DVPILLDADTGYGNFNNAR 97 (295)
T ss_dssp CEEEEEECSHHHHHHHHHHTCSCEEECCHHHHHTC---------CHHHHHHHHHHHHTC--SSCEEEECCSSCSSHHHHH
T ss_pred cEEEecCCCHHHHHHHHHcCCCEEEeChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcC--CCCEEecCCCCCCCHHHHH
Confidence 344446667788999999999999998641 11 1233444443 23 3333333 7999999653 3444443
Q ss_pred ----HHHHcCcCEEEEc
Q 018519 281 ----KALALGASGIFIG 293 (354)
Q Consensus 281 ----kalalGAd~V~ig 293 (354)
+.+..||.+|.|-
T Consensus 98 ~~v~~l~~aGaagv~iE 114 (295)
T 1s2w_A 98 RLVRKLEDRGVAGACLE 114 (295)
T ss_dssp HHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHcCCcEEEEC
Confidence 3445899999873
No 472
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=75.66 E-value=8.6 Score=35.64 Aligned_cols=82 Identities=21% Similarity=0.214 Sum_probs=52.0
Q ss_pred ccccccCCHHHHHHHHHhCCCEEEEecCCc-----CCCCCCcChHH-HHHHHHHHhc--CCccEEEcCCCCC--HHHHH-
Q 018519 212 LSWKGVLTAEDARIAVQAGAAGIIVSNHGA-----RQLDYVPATIM-ALEEVVKATQ--GRIPVFLDGGVRR--GTDVF- 280 (354)
Q Consensus 212 ~~w~Gi~~~~~a~~~~~~G~d~I~vs~~gg-----~~~~~~~~~~~-~l~~i~~~~~--~~i~vi~~GGi~~--g~dv~- 280 (354)
+..-++.+.-.|+.+.++|+|+|.+||.+- ...|.++-+++ .+..+....+ .++||++|..-.. +..+.
T Consensus 20 i~~~~a~D~~sA~l~e~aGf~ai~vsG~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~~PviaD~d~Gyg~~~~v~~ 99 (302)
T 3fa4_A 20 IVAPGVYDGLSARVALSAGFDALYMTGAGTAASVHGQADLGICTLNDMRANAEMISNISPSTPVIADADTGYGGPIMVAR 99 (302)
T ss_dssp EEEEEECSHHHHHHHHTTTCSCEEECHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHTTSTTSCEEEECTTTTSSHHHHHH
T ss_pred EEEecCcCHHHHHHHHHcCCCEEEeCcHHHHHHHcCCCCCCcCCHHHHHHHHHHHHhhccCCCEEEECCCCCCCHHHHHH
Confidence 433455677889999999999999976321 02355666654 3444333332 2799999976553 33333
Q ss_pred ---HHHHcCcCEEEEc
Q 018519 281 ---KALALGASGIFIG 293 (354)
Q Consensus 281 ---kalalGAd~V~ig 293 (354)
+....||.+|.|-
T Consensus 100 tv~~l~~aGaagv~iE 115 (302)
T 3fa4_A 100 TTEQYSRSGVAAFHIE 115 (302)
T ss_dssp HHHHHHHTTCCEEEEC
T ss_pred HHHHHHHcCCcEEEEC
Confidence 3345899999775
No 473
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=75.51 E-value=1.8 Score=38.77 Aligned_cols=65 Identities=11% Similarity=0.171 Sum_probs=40.2
Q ss_pred CCHHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcH
Q 018519 218 LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 294 (354)
Q Consensus 218 ~~~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr 294 (354)
.+.+.+..+.++|+|+|.|.+.-|. ......+.+.++++ .++|++.--+ +.+. +.-|||++.+=.
T Consensus 24 ~~~~~l~~~~~~GtDaI~vGgs~gv---t~~~~~~~v~~ik~---~~~Piil~p~--~~~~----~~~gaD~il~ps 88 (235)
T 3w01_A 24 ISDDDLDAICMSQTDAIMIGGTDDV---TEDNVIHLMSKIRR---YPLPLVLEIS--NIES----VMPGFDFYFVPT 88 (235)
T ss_dssp CCHHHHHHHHTSSCSEEEECCSSCC---CHHHHHHHHHHHTT---SCSCEEEECC--CSTT----CCTTCSEEEEEE
T ss_pred CCHHHHHHHHHcCCCEEEECCcCCc---CHHHHHHHHHHhcC---cCCCEEEecC--CHHH----hhcCCCEEEEcc
Confidence 4677888889999999999543221 11112333444443 2789876655 3322 345999998865
No 474
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=74.96 E-value=53 Score=31.11 Aligned_cols=123 Identities=24% Similarity=0.238 Sum_probs=76.0
Q ss_pred CChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCcc
Q 018519 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (354)
Q Consensus 133 ~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (354)
.+++.+.+.++++.+.|++++-+.++.... . .....+.++.+...+..+
T Consensus 143 ~~~e~~~~~a~~~~~~G~~~iKlKvg~~~~--------------~-----------------~d~~~v~avR~~~~~~~L 191 (389)
T 3s5s_A 143 GSPERAEEAARRAAAMGFRALKVKVGGRLA--------------A-----------------SDPARIEAIHAAAPGASL 191 (389)
T ss_dssp SCSHHHHHHHHHHHHHTCCEEEEECCGGGT--------------T-----------------THHHHHHHHHHHCTTCEE
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEecCCCh--------------H-----------------HHHHHHHHHHHhCCCCeE
Confidence 577777788888878899999988753210 0 011123333333222223
Q ss_pred ccc--ccCCHHHHHHHHH----hCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcC
Q 018519 213 SWK--GVLTAEDARIAVQ----AGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG 286 (354)
Q Consensus 213 ~w~--Gi~~~~~a~~~~~----~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalG 286 (354)
..| +-.++++|.+..+ .+.+...+ -| ...+..++.+.++++.. .+||.++=-+.+..|+.+++..|
T Consensus 192 ~vDaN~~w~~~~A~~~~~~L~~~~~~i~~i-----Ee-P~~~~d~~~~~~l~~~~--~iPIa~dEs~~~~~~~~~~i~~~ 263 (389)
T 3s5s_A 192 ILDGNGGLTAGEALALVAHARRLGADVALL-----EQ-PVPRDDWDGMKEVTRRA--GVDVAADESAASAEDVLRVAAER 263 (389)
T ss_dssp EEECTTCSCHHHHHHHHHHHHHTTCEEEEE-----EC-CSCTTCHHHHHHHHHHS--SSCEEESTTCSSHHHHHHHHHTT
T ss_pred EEECCCCCCHHHHHHHHHHHhhCCCCeEEE-----EC-CCCcccHHHHHHHHhhC--CCCEEECCCCCCHHHHHHHHHcC
Confidence 323 3457787754332 23322233 01 11233578888888876 79999999999999999999987
Q ss_pred -cCEEEEcH
Q 018519 287 -ASGIFIGR 294 (354)
Q Consensus 287 -Ad~V~igr 294 (354)
+|.|++--
T Consensus 264 a~d~v~~k~ 272 (389)
T 3s5s_A 264 AATVVNIKL 272 (389)
T ss_dssp CCSEEEECH
T ss_pred CCCEEEecC
Confidence 78888753
No 475
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=74.81 E-value=3.4 Score=39.55 Aligned_cols=41 Identities=20% Similarity=0.269 Sum_probs=35.3
Q ss_pred hHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEc
Q 018519 250 TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 293 (354)
Q Consensus 250 ~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~ig 293 (354)
.++.+.++++.+ ++||++- |+.+.+++.+++.+|||+|.++
T Consensus 213 ~~~~i~~i~~~~--~~Pv~vk-gv~t~e~a~~a~~aGad~I~vs 253 (380)
T 1p4c_A 213 NWEALRWLRDLW--PHKLLVK-GLLSAEDADRCIAEGADGVILS 253 (380)
T ss_dssp CHHHHHHHHHHC--CSEEEEE-EECCHHHHHHHHHTTCSEEEEC
T ss_pred cHHHHHHHHHhc--CCCEEEE-ecCcHHHHHHHHHcCCCEEEEc
Confidence 467788888877 7899875 5999999999999999999993
No 476
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=74.57 E-value=7.3 Score=36.21 Aligned_cols=83 Identities=18% Similarity=0.185 Sum_probs=52.1
Q ss_pred cccccccCCHHHHHHHHHhCCCEEEEecCCc----C-CCCCCcChHHH-HHHHHHHhcC---CccEEEcCCCC--CHHHH
Q 018519 211 SLSWKGVLTAEDARIAVQAGAAGIIVSNHGA----R-QLDYVPATIMA-LEEVVKATQG---RIPVFLDGGVR--RGTDV 279 (354)
Q Consensus 211 ~~~w~Gi~~~~~a~~~~~~G~d~I~vs~~gg----~-~~~~~~~~~~~-l~~i~~~~~~---~i~vi~~GGi~--~g~dv 279 (354)
.+..-++.+.-.|+.+.++|+|+|.+||.+- . ..|.++-+++. +..+....+. ++||++|..-. ++..+
T Consensus 26 ~i~~~~a~D~~sA~l~e~aGf~ai~vsG~~~a~s~~G~pD~~~vt~~em~~~~~~i~r~~~~~~PviaD~d~Gyg~~~~v 105 (307)
T 3lye_A 26 LIVCPGVYDGLSARTAMELGFKSLYMTGAGTTASRLGQPDLAIAQLHDMRDNADMIANLDPFGPPLIADMDTGYGGPIMV 105 (307)
T ss_dssp CEEEEEECSHHHHHHHHHTTCSCEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHTSSTTSCCEEEECTTCSSSHHHH
T ss_pred eEEEecCcCHHHHHHHHHcCCCEEEeccHHHHHHhcCCCCCCCCCHHHHHHHHHhhhccCCCCCcEEEECCCCCCCHHHH
Confidence 3444456677889999999999999976421 0 23556666653 3333333321 48999987555 34343
Q ss_pred H----HHHHcCcCEEEEc
Q 018519 280 F----KALALGASGIFIG 293 (354)
Q Consensus 280 ~----kalalGAd~V~ig 293 (354)
. +....||.+|.|-
T Consensus 106 ~~~v~~l~~aGaagv~iE 123 (307)
T 3lye_A 106 ARTVEHYIRSGVAGAHLE 123 (307)
T ss_dssp HHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHcCCeEEEEc
Confidence 3 3345899999774
No 477
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=74.51 E-value=26 Score=26.80 Aligned_cols=72 Identities=17% Similarity=0.124 Sum_probs=52.7
Q ss_pred CCHHHHHHHHH---hCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcH
Q 018519 218 LTAEDARIAVQ---AGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 294 (354)
Q Consensus 218 ~~~~~a~~~~~---~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr 294 (354)
.+.+++..... ...|.|+++-+- .+...++.+..+++.. ..+|||+-.+-.+...+.+++.+||+.+.. .
T Consensus 34 ~~~~~a~~~~~~~~~~~dlvi~d~~l-----~~~~g~~~~~~l~~~~-~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~-k 106 (143)
T 3jte_A 34 SSSTEGLRIFTENCNSIDVVITDMKM-----PKLSGMDILREIKKIT-PHMAVIILTGHGDLDNAILAMKEGAFEYLR-K 106 (143)
T ss_dssp SSHHHHHHHHHHTTTTCCEEEEESCC-----SSSCHHHHHHHHHHHC-TTCEEEEEECTTCHHHHHHHHHTTCSEEEE-S
T ss_pred CCHHHHHHHHHhCCCCCCEEEEeCCC-----CCCcHHHHHHHHHHhC-CCCeEEEEECCCCHHHHHHHHHhCcceeEe-C
Confidence 46777776654 578999886542 1234567777777653 478999999999999999999999998754 4
Q ss_pred HH
Q 018519 295 PV 296 (354)
Q Consensus 295 ~~ 296 (354)
|+
T Consensus 107 p~ 108 (143)
T 3jte_A 107 PV 108 (143)
T ss_dssp SC
T ss_pred CC
Confidence 53
No 478
>2i1o_A Nicotinate phosphoribosyltransferase; ZIN ION, zinc finger M structural genomics, PSI, protein structure initiative; 2.40A {Thermoplasma acidophilum} PDB: 1ytd_A* 1yte_A* 1ytk_A
Probab=74.32 E-value=8.5 Score=37.06 Aligned_cols=73 Identities=18% Similarity=0.150 Sum_probs=48.3
Q ss_pred HHHHHHHHHh--CCCEEEEecCCcCCCCCCcChHHHHHHHHHHh---c-CCccEEEcCCCCCHHHHHHHHHcCcCEEEEc
Q 018519 220 AEDARIAVQA--GAAGIIVSNHGARQLDYVPATIMALEEVVKAT---Q-GRIPVFLDGGVRRGTDVFKALALGASGIFIG 293 (354)
Q Consensus 220 ~~~a~~~~~~--G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~---~-~~i~vi~~GGi~~g~dv~kalalGAd~V~ig 293 (354)
.++|..+.+. |+|+|-++|..-+. + -..+...++++.+ + .++.|++|||| +...+.+..+.|+|.+.+|
T Consensus 224 ~~~al~~a~~l~~~d~IrlDs~~~~~---g-d~~~~v~~v~~~ld~~G~~~~~I~aSggl-~~~~i~~l~~~GvD~~gvG 298 (398)
T 2i1o_A 224 KFAAIKIAEMFDKVDYIRLDTPSSRR---G-NFEALIREVRWELALRGRSDIKIMVSGGL-DENTVKKLREAGAEAFGVG 298 (398)
T ss_dssp HHHHHHHHTTCSCCCEEEECCCGGGC---S-CHHHHHHHHHHHHHHTTCTTSEEEEESSC-CHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHhhcCCcEEEeCCCCCCc---c-cHHHHHHHHHHHHHhCCCCceEEEEeCCC-CHHHHHHHHHcCCCEEEeC
Confidence 4555555555 99999998753210 1 1233444455433 2 26889999999 5677777777999999999
Q ss_pred HHHH
Q 018519 294 RPVV 297 (354)
Q Consensus 294 r~~l 297 (354)
+-+.
T Consensus 299 t~l~ 302 (398)
T 2i1o_A 299 TSIS 302 (398)
T ss_dssp HHHH
T ss_pred cccC
Confidence 9654
No 479
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=74.32 E-value=4.1 Score=36.52 Aligned_cols=76 Identities=16% Similarity=0.106 Sum_probs=51.8
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCC-cChHHHHHHHHHHhcC-CccEEEcCCCCCHHHHHHH----HHcCcCEEEEc
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYV-PATIMALEEVVKATQG-RIPVFLDGGVRRGTDVFKA----LALGASGIFIG 293 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~-~~~~~~l~~i~~~~~~-~i~vi~~GGi~~g~dv~ka----lalGAd~V~ig 293 (354)
..+++.|++.|||.|.+.-.-|.-.++- ..-.+-|.++++++++ -++||..-|.-+.+.+.++ ..+|||+|=..
T Consensus 98 v~Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei~~a~~ia~~aGADfVKTS 177 (239)
T 3ngj_A 98 AYETKVAVEQGAEEVDMVINIGMVKAKKYDDVEKDVKAVVDASGKALTKVIIECCYLTNEEKVEVCKRCVAAGAEYVKTS 177 (239)
T ss_dssp HHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHHTTSEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECC
T ss_pred HHHHHHHHHcCCCEEEEEeehHHhccccHHHHHHHHHHHHHHhcCCceEEEEecCCCCHHHHHHHHHHHHHHCcCEEECC
Confidence 4688899999999999742211101111 1123456666777643 3788888888899999888 67899999888
Q ss_pred HH
Q 018519 294 RP 295 (354)
Q Consensus 294 r~ 295 (354)
+-
T Consensus 178 TG 179 (239)
T 3ngj_A 178 TG 179 (239)
T ss_dssp CS
T ss_pred CC
Confidence 63
No 480
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=74.27 E-value=45 Score=31.69 Aligned_cols=122 Identities=14% Similarity=0.163 Sum_probs=75.9
Q ss_pred CChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc--CC
Q 018519 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI--DR 210 (354)
Q Consensus 133 ~d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 210 (354)
.+++.+.+.++++.+.||+++-+.++++.. ..| ...+.++.+... +.
T Consensus 163 ~~~e~~~~~a~~~~~~G~~~~KlKvg~~~~---~~d----------------------------~~~v~avR~a~gg~~~ 211 (391)
T 4e8g_A 163 GQPDEIARIAAEKVAEGFPRLQIKIGGRPV---EID----------------------------IETVRKVWERIRGTGT 211 (391)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCSSCH---HHH----------------------------HHHHHHHHHHHTTTTC
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEcCCCCCH---HHH----------------------------HHHHHHHHHHhCCCCC
Confidence 577888888888888999999998875210 001 111222223221 12
Q ss_pred ccccc--ccCCHHHHHHHHHhCCC-EEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcC-
Q 018519 211 SLSWK--GVLTAEDARIAVQAGAA-GIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG- 286 (354)
Q Consensus 211 ~~~w~--Gi~~~~~a~~~~~~G~d-~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalG- 286 (354)
.+..| +-.++++|.+..+.=.+ .+.+ -|. ...++.+.++++.. .+||.++.-+.+..|+.+++..|
T Consensus 212 ~L~vDaN~~w~~~~A~~~~~~L~~~~i~i-----EeP---~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~~~~~a 281 (391)
T 4e8g_A 212 RLAVDGNRSLPSRDALRLSRECPEIPFVL-----EQP---CNTLEEIAAIRGRV--QHGIYLDESGEDLSTVIRAAGQGL 281 (391)
T ss_dssp EEEEECTTCCCHHHHHHHHHHCTTSCEEE-----ESC---SSSHHHHHHHGGGC--CSCEEESTTCCSHHHHHHHHHTTC
T ss_pred eEEEeCCCCCCHHHHHHHHHHHhhcCeEE-----ecC---CccHHHHHHHHhhC--CCCEEeCCCCCCHHHHHHHHHcCC
Confidence 23222 33577777654432111 1133 121 24577777777765 79999999999999999999987
Q ss_pred cCEEEEcHH
Q 018519 287 ASGIFIGRP 295 (354)
Q Consensus 287 Ad~V~igr~ 295 (354)
+|.|++--.
T Consensus 282 ~d~v~ik~~ 290 (391)
T 4e8g_A 282 CDGFGMKLT 290 (391)
T ss_dssp CSEEEEEHH
T ss_pred CCEEEeCcc
Confidence 799988653
No 481
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=74.19 E-value=12 Score=33.86 Aligned_cols=81 Identities=14% Similarity=0.131 Sum_probs=53.0
Q ss_pred cccccccCCHHHHHHHHHhCCCEEEEecCCcC----CCCCCcChHHHH-H---HHHHHhcCCccEEEcCCCC---CHHHH
Q 018519 211 SLSWKGVLTAEDARIAVQAGAAGIIVSNHGAR----QLDYVPATIMAL-E---EVVKATQGRIPVFLDGGVR---RGTDV 279 (354)
Q Consensus 211 ~~~w~Gi~~~~~a~~~~~~G~d~I~vs~~gg~----~~~~~~~~~~~l-~---~i~~~~~~~i~vi~~GGi~---~g~dv 279 (354)
++..-+..+.-.|+.+.++|+|.|.|....+. ..|..+-+++.+ . .+++.. ...+|++|=+.. +++++
T Consensus 18 ~i~~~tayD~~sA~l~e~aG~d~ilvGdsl~~~~lG~~dt~~vtldemi~h~~aV~r~~-~~~~vvaD~pfgsy~~~~~a 96 (264)
T 1m3u_A 18 RFATITAYDYSFAKLFADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGA-PNCLLLADLPFMAYATPEQA 96 (264)
T ss_dssp CEEEEECCSHHHHHHHHHHTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHC-TTSEEEEECCTTSSSSHHHH
T ss_pred cEEEEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCcCHHHHHHHHHHHHhhC-CCCcEEEECCCCCcCCHHHH
Confidence 34444556778899999999999998322111 134556666533 3 333333 245788887775 77777
Q ss_pred H----HHHHcCcCEEEE
Q 018519 280 F----KALALGASGIFI 292 (354)
Q Consensus 280 ~----kalalGAd~V~i 292 (354)
+ +.+..||++|-+
T Consensus 97 ~~~a~rl~kaGa~aVkl 113 (264)
T 1m3u_A 97 FENAATVMRAGANMVKI 113 (264)
T ss_dssp HHHHHHHHHTTCSEEEC
T ss_pred HHHHHHHHHcCCCEEEE
Confidence 7 466689999988
No 482
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=73.99 E-value=7.4 Score=36.22 Aligned_cols=59 Identities=8% Similarity=0.070 Sum_probs=44.0
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEE
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFI 292 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~i 292 (354)
.+.+..+.++|+|.|.+ |++ .| .+.+..+++. .++|+. ++.+.+++.++...|||+|.+
T Consensus 92 ~~~~~~~~~~g~d~V~l--~~g------~p-~~~~~~l~~~---g~~v~~--~v~s~~~a~~a~~~GaD~i~v 150 (326)
T 3bo9_A 92 DDLVKVCIEEKVPVVTF--GAG------NP-TKYIRELKEN---GTKVIP--VVASDSLARMVERAGADAVIA 150 (326)
T ss_dssp HHHHHHHHHTTCSEEEE--ESS------CC-HHHHHHHHHT---TCEEEE--EESSHHHHHHHHHTTCSCEEE
T ss_pred HHHHHHHHHCCCCEEEE--CCC------Cc-HHHHHHHHHc---CCcEEE--EcCCHHHHHHHHHcCCCEEEE
Confidence 46777888999999998 443 12 3444444442 577775 689999999999999999998
No 483
>2ash_A Queuine tRNA-ribosyltransferase; TM1561, tRNA-guanine, struc genomics, joint center for structural genomics, JCSG; 1.90A {Thermotoga maritima}
Probab=73.85 E-value=15 Score=35.12 Aligned_cols=74 Identities=15% Similarity=0.082 Sum_probs=54.1
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCCCcCh---HHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHH
Q 018519 221 EDARIAVQAGAAGIIVSNHGARQLDYVPAT---IMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 297 (354)
Q Consensus 221 ~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~---~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l 297 (354)
+-|+.+.+.+.++..|.| +..|.+. ++.|..+...++.+.|....| +.++.|++.++++|+|.+=...|..
T Consensus 206 ~sa~~l~~~~~~GyaIGG-----lsvGe~~~~~~~~l~~~~~~LP~~kPRyLmG-vG~P~~il~~V~~GvDmFDcv~Ptr 279 (381)
T 2ash_A 206 ESALQLTSIGFDGYAIGG-----LSIGEERSLTLEMTEVTVEFLPEDKPRYFMG-GGSPELILELVDRGVDMFDSVFPTR 279 (381)
T ss_dssp HHHHHHHTTCCSEEEECS-----CSSSSCHHHHHHHHHHHHTTSCTTSCEEECS-CCCHHHHHHHHTTTCCEEEESHHHH
T ss_pred HHHHHHHhcCCceEEecC-----cccCCCHHHHHHHHHHHHhhCCCCCcEEEcC-CCCHHHHHHHHHcCCCEEeCChhhh
Confidence 445677778999998843 2233333 344555555566678998876 7999999999999999988888877
Q ss_pred HHH
Q 018519 298 YSL 300 (354)
Q Consensus 298 ~~~ 300 (354)
.+.
T Consensus 280 ~Ar 282 (381)
T 2ash_A 280 IAR 282 (381)
T ss_dssp HHH
T ss_pred hhc
Confidence 653
No 484
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=73.85 E-value=13 Score=37.92 Aligned_cols=74 Identities=19% Similarity=0.224 Sum_probs=46.9
Q ss_pred HHHHHHHHHhCCCEEEEecCCcC---C----------CCCCcC-------hHHHHHHHHHHhcCCccEEE--------cC
Q 018519 220 AEDARIAVQAGAAGIIVSNHGAR---Q----------LDYVPA-------TIMALEEVVKATQGRIPVFL--------DG 271 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~---~----------~~~~~~-------~~~~l~~i~~~~~~~i~vi~--------~G 271 (354)
.+.|+++.++|+|+|-+++.-|+ | -.+|-+ ..+.+..++++++.++||.+ .+
T Consensus 144 ~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~~ 223 (671)
T 1ps9_A 144 ARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVED 223 (671)
T ss_dssp HHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCSTT
T ss_pred HHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccccCCC
Confidence 46788999999999999542222 1 112222 24456666677766788866 45
Q ss_pred CCCC--HHHHHHHHH-cCcCEEEEc
Q 018519 272 GVRR--GTDVFKALA-LGASGIFIG 293 (354)
Q Consensus 272 Gi~~--g~dv~kala-lGAd~V~ig 293 (354)
|... ...+++.+. .|+|++-++
T Consensus 224 g~~~~~~~~~a~~l~~~g~d~i~v~ 248 (671)
T 1ps9_A 224 GGTFAETVELAQAIEAAGATIINTG 248 (671)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCCHHHHHHHHHHHHhcCCCEEEcC
Confidence 6532 334566775 899999874
No 485
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=73.75 E-value=15 Score=33.59 Aligned_cols=81 Identities=14% Similarity=0.167 Sum_probs=51.4
Q ss_pred cccccccCCHHHHHHHHHhCCCEEEEecCCcC----CCCCCcChHHHH-H---HHHHHhcCCccEEEcCCC----CCHHH
Q 018519 211 SLSWKGVLTAEDARIAVQAGAAGIIVSNHGAR----QLDYVPATIMAL-E---EVVKATQGRIPVFLDGGV----RRGTD 278 (354)
Q Consensus 211 ~~~w~Gi~~~~~a~~~~~~G~d~I~vs~~gg~----~~~~~~~~~~~l-~---~i~~~~~~~i~vi~~GGi----~~g~d 278 (354)
++..-+..+.-.|+.+.++|+|.|.+....+- ..|..+-+++.+ . .|++.. ...+|++|=+. .++++
T Consensus 18 ~i~~~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~-~~~~vvaD~pfgsy~~s~~~ 96 (275)
T 1o66_A 18 KIAMLTAYESSFAALMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGA-KNAMIVSDLPFGAYQQSKEQ 96 (275)
T ss_dssp CEEEEECCSHHHHHHHHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHC-SSSEEEEECCTTSSSSCHHH
T ss_pred cEEEEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhC-CCCeEEEECCCCCccCCHHH
Confidence 34444556778899999999999976322221 134456666533 3 333333 24578899555 36777
Q ss_pred HH----HHHHcCcCEEEE
Q 018519 279 VF----KALALGASGIFI 292 (354)
Q Consensus 279 v~----kalalGAd~V~i 292 (354)
++ +.+..||++|-+
T Consensus 97 a~~na~rl~kaGa~aVkl 114 (275)
T 1o66_A 97 AFAAAAELMAAGAHMVKL 114 (275)
T ss_dssp HHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHcCCcEEEE
Confidence 77 466799999988
No 486
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=73.54 E-value=6.2 Score=38.40 Aligned_cols=79 Identities=27% Similarity=0.288 Sum_probs=50.9
Q ss_pred ccCCHHHHHHHHHhCCCEEEEecCC--------cC-CCCCCcCh----HHHHHHHHHHhc---------------C-Ccc
Q 018519 216 GVLTAEDARIAVQAGAAGIIVSNHG--------AR-QLDYVPAT----IMALEEVVKATQ---------------G-RIP 266 (354)
Q Consensus 216 Gi~~~~~a~~~~~~G~d~I~vs~~g--------g~-~~~~~~~~----~~~l~~i~~~~~---------------~-~i~ 266 (354)
|+.+.-.|+.+.++|.++|.+||.+ .. ..|.+.-+ ...+.+|.+++. + .+|
T Consensus 71 ga~d~~sA~~~~~aGf~Aiy~SG~~vAa~~~~s~~G~PD~~~~~~~ev~~~v~~I~~a~~~~d~~~~~~~~~~~~d~~~P 150 (429)
T 1f8m_A 71 GALTGNMAVQQVRAGLKAIYLSGWQVAGDANLSGHTYPDQSLYPANSVPQVVRRINNALQRADQIAKIEGDTSVENWLAP 150 (429)
T ss_dssp BCCSHHHHHHHHHTTCSCEEECHHHHHHHCCTTCCCCCSSSCSCTTHHHHHHHHHHHHHHHHHHHHHHHTCCSCSCSSCC
T ss_pred CCCCHHHHHHHHHcCCCEEEechHHHhcccccccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHhhccCccccCCCC
Confidence 7778889999999999999998753 11 12333322 234555555541 1 389
Q ss_pred EEEcCCCCCHH-----HHHHH-HHcCcCEEEEcH
Q 018519 267 VFLDGGVRRGT-----DVFKA-LALGASGIFIGR 294 (354)
Q Consensus 267 vi~~GGi~~g~-----dv~ka-lalGAd~V~igr 294 (354)
||+|+.=..|. ..+|. +.+||.+|.|--
T Consensus 151 IiaD~DtGfG~~~nv~~tvk~~i~AGaaGi~IED 184 (429)
T 1f8m_A 151 IVADGEAGFGGALNVYELQKALIAAGVAGSHWED 184 (429)
T ss_dssp EEEECTTTTSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred EEEECCCCCCCcHHHHHHHHHHHHcCCEEEEEec
Confidence 99986544332 23444 458999998864
No 487
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=73.50 E-value=2.9 Score=41.07 Aligned_cols=77 Identities=21% Similarity=0.288 Sum_probs=48.6
Q ss_pred HhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcCCccEEEcCCCCC-HHHHHHHHHcCcCE------EEEcHHHHHHH
Q 018519 228 QAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR-GTDVFKALALGASG------IFIGRPVVYSL 300 (354)
Q Consensus 228 ~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGi~~-g~dv~kalalGAd~------V~igr~~l~~~ 300 (354)
++|.++++++.+- .+.+..+++.++ +.+++. =||+- +.+...+++.|+|. +.+|||++.+
T Consensus 169 ~~g~~GvV~gat~----------~~e~~~ir~~~~-~~~~l~-PGig~qg~tp~~a~~~g~d~~~~~~livvgR~I~~A- 235 (453)
T 3qw4_B 169 VNGNVGLVVGATD----------PVALARVRARAP-TLWFLV-PGIGAQGGSLKASLDAGLRADGSGMLINVSRGLARA- 235 (453)
T ss_dssp TTSCEEEEECTTC----------HHHHHHHHHHCS-SCCEEE-CCSSTTCCCHHHHHHHHCCTTSCCEEEEESHHHHSC-
T ss_pred hcCCeEEEECCCC----------HHHHHHHHHhCC-CCeEEE-CCcCCCCCCHHHHHHhcCCcccCCceEecChhhccC-
Confidence 4689999884221 244667777775 345544 45553 34666778889988 9999999874
Q ss_pred hhcCHHHHHHHHHHHHHHHHHH
Q 018519 301 AAEGEKGVRRVLEMLREEFELA 322 (354)
Q Consensus 301 ~~~G~~gv~~~l~~l~~el~~~ 322 (354)
+......+.+.+|++..
T Consensus 236 -----~dp~~aa~~i~~~i~~~ 252 (453)
T 3qw4_B 236 -----ADPRAAAKELCEEINAI 252 (453)
T ss_dssp -----SCHHHHHHHHHHHHHHH
T ss_pred -----CCHHHHHHHHHHHHHHH
Confidence 12334555555555543
No 488
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=73.20 E-value=13 Score=35.34 Aligned_cols=74 Identities=15% Similarity=0.057 Sum_probs=43.7
Q ss_pred HHHHHHHHHhCCCEEEEecCCcC-------------CCCCCcC-------hHHHHHHHHHHhcCCccEEEc--CC-----
Q 018519 220 AEDARIAVQAGAAGIIVSNHGAR-------------QLDYVPA-------TIMALEEVVKATQGRIPVFLD--GG----- 272 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~-------------~~~~~~~-------~~~~l~~i~~~~~~~i~vi~~--GG----- 272 (354)
.+-|+++.++|+|+|-|.+.-|+ .-.+|-+ ..+.+..++++++.+ ||.+- ..
T Consensus 169 ~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~-~v~vrls~~~~~~~ 247 (377)
T 2r14_A 169 RQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPE-RVGIRLTPFLELFG 247 (377)
T ss_dssp HHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG-GEEEEECTTCCCTT
T ss_pred HHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCC-cEEEEeccccccCC
Confidence 46788899999999999542221 1112222 234556666666534 66552 11
Q ss_pred C------CCHHHHHHHHH-cCcCEEEEcH
Q 018519 273 V------RRGTDVFKALA-LGASGIFIGR 294 (354)
Q Consensus 273 i------~~g~dv~kala-lGAd~V~igr 294 (354)
+ .....+++.|. .|+|++-+..
T Consensus 248 ~~~~~~~~~~~~la~~le~~Gvd~i~v~~ 276 (377)
T 2r14_A 248 LTDDEPEAMAFYLAGELDRRGLAYLHFNE 276 (377)
T ss_dssp CCCSCHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 1 11344567776 8999998854
No 489
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=73.11 E-value=8.7 Score=35.43 Aligned_cols=72 Identities=28% Similarity=0.191 Sum_probs=44.1
Q ss_pred CHHHHHHHHHhCCCEEEEecCCcCCCC---CCcChHHHHHHHHHHhc-CCccEEEcCCCCCHHHHHHHHHcCcCEEEE
Q 018519 219 TAEDARIAVQAGAAGIIVSNHGARQLD---YVPATIMALEEVVKATQ-GRIPVFLDGGVRRGTDVFKALALGASGIFI 292 (354)
Q Consensus 219 ~~~~a~~~~~~G~d~I~vs~~gg~~~~---~~~~~~~~l~~i~~~~~-~~i~vi~~GGi~~g~dv~kalalGAd~V~i 292 (354)
..+.|++..+.|||.|.|.+-..+... ....-++-+..+.+.+. .++||-.|. .+++-+.+|+..||+.|.=
T Consensus 54 a~~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~~vpiSIDT--~~~~Va~aAl~aGa~iINd 129 (294)
T 2dqw_A 54 ALERAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSLGVPVSVDT--RKPEVAEEALKLGAHLLND 129 (294)
T ss_dssp CHHHHHHHHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHTTCSCEEEEC--SCHHHHHHHHHHTCSEEEC
T ss_pred HHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhCCCeEEEEC--CCHHHHHHHHHhCCCEEEE
Confidence 567889999999999999653222110 11222222222333332 278888876 7788888889899987753
No 490
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=72.82 E-value=13 Score=33.63 Aligned_cols=65 Identities=23% Similarity=0.190 Sum_probs=45.4
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhcC--CccEEEcCCCCCHHHHHHHHHc--CcCEEE
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQG--RIPVFLDGGVRRGTDVFKALAL--GASGIF 291 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~--~i~vi~~GGi~~g~dv~kalal--GAd~V~ 291 (354)
.+.|++..+.|||.|.|.+ |. ...+..+.+.++...+.. ++||..|. .+++-+.+|+.. ||+.+.
T Consensus 28 ~~~a~~~v~~GAdiIDIg~--g~---~~v~~~ee~~rvv~~i~~~~~~pisIDT--~~~~v~~aAl~a~~Ga~iIN 96 (262)
T 1f6y_A 28 QEWARRQEEGGARALDLNV--GP---AVQDKVSAMEWLVEVTQEVSNLTLCLDS--TNIKAIEAGLKKCKNRAMIN 96 (262)
T ss_dssp HHHHHHHHHHTCSEEEEBC--C-------CHHHHHHHHHHHHHTTCCSEEEEEC--SCHHHHHHHHHHCSSCEEEE
T ss_pred HHHHHHHHHCCCcEEEECC--CC---CCCChHHHHHHHHHHHHHhCCCeEEEeC--CCHHHHHHHHhhCCCCCEEE
Confidence 4567888999999999944 21 123455556555555432 68898887 578888888988 998886
No 491
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=72.80 E-value=9.6 Score=35.57 Aligned_cols=71 Identities=20% Similarity=0.019 Sum_probs=42.2
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHH---HHHhc---CCccEEEcCCCCCHHHHHHHHHcCcCEEEEc
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEV---VKATQ---GRIPVFLDGGVRRGTDVFKALALGASGIFIG 293 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i---~~~~~---~~i~vi~~GGi~~g~dv~kalalGAd~V~ig 293 (354)
.+.|++..+.|||.|.|.+-..|.. ...+.-+.+.++ .+.+. .++||-+|. .+++-+.+|+..||+.|.=-
T Consensus 68 ~~~A~~~v~~GAdIIDIGgeSTrPG-~~v~~~eEl~Rv~pvI~~l~~~~~~vpISIDT--~~~~VaeaAl~aGa~iINDV 144 (318)
T 2vp8_A 68 RDAVHRAVADGADVIDVGGVKAGPG-ERVDVDTEITRLVPFIEWLRGAYPDQLISVDT--WRAQVAKAACAAGADLINDT 144 (318)
T ss_dssp HHHHHHHHHTTCSEEEEC-----------CHHHHHHHHHHHHHHHHHHSTTCEEEEEC--SCHHHHHHHHHHTCCEEEET
T ss_pred HHHHHHHHHCCCCEEEECCCcCCCC-CCCCHHHHHHHHHHHHHHHHhhCCCCeEEEeC--CCHHHHHHHHHhCCCEEEEC
Confidence 4567889999999999954211111 122333333333 22222 167887775 78888889999999987643
No 492
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=72.32 E-value=9.9 Score=35.85 Aligned_cols=28 Identities=25% Similarity=0.249 Sum_probs=23.7
Q ss_pred CCcccccccCCHHHHHHHHHhCCCEEEE
Q 018519 209 DRSLSWKGVLTAEDARIAVQAGAAGIIV 236 (354)
Q Consensus 209 ~~~~~w~Gi~~~~~a~~~~~~G~d~I~v 236 (354)
.|.+.-.||.+.+||.+++.+|||+|.|
T Consensus 276 ipIIg~GGI~s~~da~~~l~aGAd~V~i 303 (345)
T 3oix_A 276 IQIIGTGGVXTGRDAFEHILCGASMVQI 303 (345)
T ss_dssp SEEEEESSCCSHHHHHHHHHHTCSEEEE
T ss_pred CcEEEECCCCChHHHHHHHHhCCCEEEE
Confidence 3445555899999999999999999998
No 493
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=72.25 E-value=4.9 Score=39.15 Aligned_cols=83 Identities=20% Similarity=0.243 Sum_probs=46.0
Q ss_pred ccccccCCHHHHHHHHHhCCCEEEEecCCcCC---------CCCCcChH----HHHHHHHHHh--------------c--
Q 018519 212 LSWKGVLTAEDARIAVQAGAAGIIVSNHGARQ---------LDYVPATI----MALEEVVKAT--------------Q-- 262 (354)
Q Consensus 212 ~~w~Gi~~~~~a~~~~~~G~d~I~vs~~gg~~---------~~~~~~~~----~~l~~i~~~~--------------~-- 262 (354)
+..-|+.++-.|+.+.++|.++|.+||.+=.. .|.+.-++ ..+.+|.+++ .
T Consensus 63 l~~~ga~D~~sA~~~~~aGf~Aiy~SG~~vAa~~~~~~~G~PD~~~~~~~ev~~~v~rI~~a~~~~d~~~~~~~~~~~~~ 142 (433)
T 3eol_A 63 VNALGALSGNQAMQMVRAGLKAIYLSGWQVAADANTASAMYPDQSLYPANAGPELAKRINRTLQRADQIETAEGKGLSVD 142 (433)
T ss_dssp EEEEBCSSHHHHHHHHHTTCCCEEEC-----------------------CHHHHHHHHHHHHHHHHHHHHHHTTSCCSSS
T ss_pred EEeCCCCcHHHHHHHHHhCCCEEEechHHHHhccchhcCCCCCCccCCHHHHHHHHHHHHHHHHHhhhhhhhhccccccc
Confidence 33337788899999999999999998853211 12232222 2344554443 0
Q ss_pred -CCccEEEcCCCCCH-----HHHHHHH-HcCcCEEEEcH
Q 018519 263 -GRIPVFLDGGVRRG-----TDVFKAL-ALGASGIFIGR 294 (354)
Q Consensus 263 -~~i~vi~~GGi~~g-----~dv~kal-alGAd~V~igr 294 (354)
..+|||+|+.=..| ...+|.+ .+||.+|.|--
T Consensus 143 d~~lPIiaD~DtGfG~~~nv~rtVk~~~~AGaAGi~IED 181 (433)
T 3eol_A 143 TWFAPIVADAEAGFGDPLDAFEIMKAYIEAGAAGVHFED 181 (433)
T ss_dssp CSCCCEEEECC---CCHHHHHHHHHHHHHHTCSEEEEES
T ss_pred CCCCCeEEECCCCCCCcHHHHHHHHHHHHcCCeEEEEec
Confidence 15999999654433 2333444 48999998864
No 494
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=71.96 E-value=60 Score=29.68 Aligned_cols=179 Identities=17% Similarity=0.159 Sum_probs=96.2
Q ss_pred ceEecccccccccCChhhHHHHHHHHHcCCcEEe--cC---CCCCCHHHHHh-------h-CC-CceEEEEeecCChHHH
Q 018519 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--SS---WSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNVV 138 (354)
Q Consensus 73 Pi~iAPm~~~~l~~~~~e~~la~aa~~~G~~~~~--s~---~~~~~~eei~~-------~-~~-~~~~~QLy~~~d~~~~ 138 (354)
|.++.|+. ..-.+.++-..+.+-..+.|+...+ ++ ..+.+.||-.+ . .. -+.+...- ..+....
T Consensus 19 ~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg-~~st~~a 96 (306)
T 1o5k_A 19 TAIVTPFK-NGELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAG-TNSTEKT 96 (306)
T ss_dssp EECCCCEE-TTEECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECC-CSCHHHH
T ss_pred eeeecCcC-CCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCC-CccHHHH
Confidence 55566764 3323333334566666678875443 33 33456665422 1 22 45666653 4577778
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhcCCccccc---
Q 018519 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWK--- 215 (354)
Q Consensus 139 ~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~--- 215 (354)
.++++.|+++|++++.+. +|.. .-| +.. ....-++++.+....|.+...
T Consensus 97 i~la~~A~~~Gadavlv~--~P~y-----------~~~---s~~------------~l~~~f~~va~a~~lPiilYn~P~ 148 (306)
T 1o5k_A 97 LKLVKQAEKLGANGVLVV--TPYY-----------NKP---TQE------------GLYQHYKYISERTDLGIVVYNVPG 148 (306)
T ss_dssp HHHHHHHHHHTCSEEEEE--CCCS-----------SCC---CHH------------HHHHHHHHHHTTCSSCEEEEECHH
T ss_pred HHHHHHHHhcCCCEEEEC--CCCC-----------CCC---CHH------------HHHHHHHHHHHhCCCCEEEEeCcc
Confidence 889999999999998875 3431 101 000 001112333443334444333
Q ss_pred --cc-CCHHHHHHHH-HhC-CCEEEEecCCcCCCCCCcChHHHHHHHHHHhcC---CccEEEcCCCCCHHHHHHHHHcCc
Q 018519 216 --GV-LTAEDARIAV-QAG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQG---RIPVFLDGGVRRGTDVFKALALGA 287 (354)
Q Consensus 216 --Gi-~~~~~a~~~~-~~G-~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~---~i~vi~~GGi~~g~dv~kalalGA 287 (354)
|+ ++++...++. +.. +-+|.-+. .++..+.++.+..++ +..| .+|. -.-++.++++||
T Consensus 149 ~tg~~l~~~~~~~La~~~pnIvgiKdss----------gd~~~~~~~~~~~~~~~~~f~v-~~G~---d~~~l~~l~~G~ 214 (306)
T 1o5k_A 149 RTGVNVLPETAARIAADLKNVVGIXEAN----------PDIDQIDRTVSLTKQARSDFMV-WSGN---DDRTFYLLCAGG 214 (306)
T ss_dssp HHSCCCCHHHHHHHHHHCTTEEEEEECC----------CCHHHHHHHHHHHHHHCTTCEE-EESS---GGGHHHHHHHTC
T ss_pred ccCcCCCHHHHHHHHHhCCCEEEEeCCC----------CCHHHHHHHHHhcCCCCCcEEE-EECc---HHHHHHHHHCCC
Confidence 64 6888888877 431 22222211 124445555554432 4444 4552 244778899999
Q ss_pred CEEEEcHH
Q 018519 288 SGIFIGRP 295 (354)
Q Consensus 288 d~V~igr~ 295 (354)
+++.-+..
T Consensus 215 ~G~is~~a 222 (306)
T 1o5k_A 215 DGVISVVS 222 (306)
T ss_dssp CEEEESGG
T ss_pred CEEEecHH
Confidence 99998873
No 495
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=71.93 E-value=15 Score=33.37 Aligned_cols=70 Identities=20% Similarity=0.131 Sum_probs=43.9
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHH---HHhc-CCccEEEcCCCCCHHHHHHHHHcCcCEEE
Q 018519 220 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVV---KATQ-GRIPVFLDGGVRRGTDVFKALALGASGIF 291 (354)
Q Consensus 220 ~~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~---~~~~-~~i~vi~~GGi~~g~dv~kalalGAd~V~ 291 (354)
.+.|+++.+.|||.|.|.+..-|......+.-+.+.++. +++. .++||-+|- +.++=+.+|+..||+.+-
T Consensus 33 ~~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi~~l~~~~v~iSIDT--~~~~Va~~al~aGa~iIN 106 (270)
T 4hb7_A 33 INRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVGFDVKISVDT--FRSEVAEACLKLGVDMIN 106 (270)
T ss_dssp HHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHTTSSSEEEEEC--SCHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHHHHhhcCCCeEEEEC--CCHHHHHHHHHhccceec
Confidence 356778899999999995532221112233333333332 3332 256666664 788888889999999886
No 496
>3bld_A Queuine tRNA-ribosyltransferase; TGT, PREQ1, glycosyltransferase, metal-binding, queuosine biosynthesis, tRNA processing; HET: PRF; 1.19A {Zymomonas mobilis} PDB: 3bl3_A* 1ozq_A* 1ozm_A* 1r5y_A* 1enu_A* 1f3e_A* 1k4h_A* 1n2v_A* 1p0b_A* 1p0d_A 1p0e_A* 1pud_A 1q2r_A* 1q2s_A* 1q4w_A* 1q63_A* 1q65_A* 1q66_A* 1k4g_A* 1s38_A* ...
Probab=71.51 E-value=12 Score=35.79 Aligned_cols=72 Identities=21% Similarity=0.185 Sum_probs=46.5
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCCCcCh---HHHHHHHHHHhcCCccEEEcCCCCCHHHHHHHHHcCcCEEEEcHHHH
Q 018519 221 EDARIAVQAGAAGIIVSNHGARQLDYVPAT---IMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 297 (354)
Q Consensus 221 ~~a~~~~~~G~d~I~vs~~gg~~~~~~~~~---~~~l~~i~~~~~~~i~vi~~GGi~~g~dv~kalalGAd~V~igr~~l 297 (354)
+-|+.+.+.+.++..|+| +..|.+. ++.|..+...++.+.|....| +.++.|++.++++|+|..=...|..
T Consensus 213 ~sa~~l~~~~~~GyaIGG-----lsvge~~~~~~~~l~~~~~~LP~~kPRylmG-vg~P~~il~~V~~GvDmFDcv~ptr 286 (386)
T 3bld_A 213 QSADALAEIGFDGYAVGG-----LAGGEGQDEMFRVLDFSVPMLPDDKPHYLMG-VGKPDDIVGAVERGIDMFDCVLPTR 286 (386)
T ss_dssp HHHHHHHHHCCSEEEECS-----CSSSSCHHHHHHHHHHHGGGSCTTSCEEETT-CCCHHHHHHHHTTTCCEEC------
T ss_pred HHHHHHHhcCCCCeeEcC-----cccCCCHHHHHHHHHHHHhhCCCCCcEEEeC-CCCHHHHHHHHHcCCCEEeCcHHHH
Confidence 345677788999999844 2233333 334555555566688998875 8899999999999998765555554
Q ss_pred H
Q 018519 298 Y 298 (354)
Q Consensus 298 ~ 298 (354)
.
T Consensus 287 ~ 287 (386)
T 3bld_A 287 S 287 (386)
T ss_dssp -
T ss_pred H
Confidence 4
No 497
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=71.43 E-value=1.7 Score=38.51 Aligned_cols=42 Identities=19% Similarity=0.217 Sum_probs=29.9
Q ss_pred HHHHHHHHHHhcCCccEEEcCCCCC------HHHHHHHHHcCcCEEEEcH
Q 018519 251 IMALEEVVKATQGRIPVFLDGGVRR------GTDVFKALALGASGIFIGR 294 (354)
Q Consensus 251 ~~~l~~i~~~~~~~i~vi~~GGi~~------g~dv~kalalGAd~V~igr 294 (354)
.+.+.++++.. ++||.+-++++. ..++-.++++|||+|.++.
T Consensus 69 ~~~i~~i~~~~--~~pv~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~~ 116 (248)
T 1geq_A 69 FWIVKEFRRHS--STPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVD 116 (248)
T ss_dssp HHHHHHHHTTC--CCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETT
T ss_pred HHHHHHHHhhC--CCCEEEEeccchhhhcCHHHHHHHHHHCCCCEEEECC
Confidence 34555555544 678888665554 4677778889999999985
No 498
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=71.38 E-value=21 Score=31.91 Aligned_cols=73 Identities=14% Similarity=0.201 Sum_probs=46.7
Q ss_pred cccccCCHHHHHHHHHhCCCEEEEec-CCcCCCCCCcChHHHHHHHHHHhc-CCccEEE-cCCCCCHHHHHHHHHcCcCE
Q 018519 213 SWKGVLTAEDARIAVQAGAAGIIVSN-HGARQLDYVPATIMALEEVVKATQ-GRIPVFL-DGGVRRGTDVFKALALGASG 289 (354)
Q Consensus 213 ~w~Gi~~~~~a~~~~~~G~d~I~vs~-~gg~~~~~~~~~~~~l~~i~~~~~-~~i~vi~-~GGi~~g~dv~kalalGAd~ 289 (354)
.|-.+.+++.++.+..+|+|+|+++. |+ +...+........+. ...++++ .-+ .+...+.+++..|+++
T Consensus 23 ~~l~v~~p~~~e~a~~~gaD~v~lDlEd~-------p~~~~~a~~~~~~~~~~~~~~~VRv~~-~~~~~i~~~l~~g~~g 94 (256)
T 1dxe_A 23 CWSALSNPISTEVLGLAGFDWLVLDGEHA-------PNDISTFIPQLMALKGSASAPVVRVPT-NEPVIIKRLLDIGFYN 94 (256)
T ss_dssp EEECSCSHHHHHHHTTSCCSEEEEESSSS-------SCCHHHHHHHHHHTTTCSSEEEEECSS-SCHHHHHHHHHTTCCE
T ss_pred EEEeCCCHHHHHHHHhCCCCEEEEcCCCC-------CCCHHHHHHHHHHHHhCCCcEEEECCC-CCHHHHHHHHhcCCce
Confidence 56667799999999999999999975 33 333444433333321 2333332 222 3455677777799999
Q ss_pred EEEc
Q 018519 290 IFIG 293 (354)
Q Consensus 290 V~ig 293 (354)
|++=
T Consensus 95 I~~P 98 (256)
T 1dxe_A 95 FLIP 98 (256)
T ss_dssp EEES
T ss_pred eeec
Confidence 8874
No 499
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=71.26 E-value=17 Score=34.20 Aligned_cols=72 Identities=19% Similarity=0.228 Sum_probs=47.2
Q ss_pred cccccCCHHHHHHHHHhCCCEEEEec-CCcCCCCCCcChHHHHHHHHHHhc--C--Ccc-EEEcCCCCCHHHHHHHHHcC
Q 018519 213 SWKGVLTAEDARIAVQAGAAGIIVSN-HGARQLDYVPATIMALEEVVKATQ--G--RIP-VFLDGGVRRGTDVFKALALG 286 (354)
Q Consensus 213 ~w~Gi~~~~~a~~~~~~G~d~I~vs~-~gg~~~~~~~~~~~~l~~i~~~~~--~--~i~-vi~~GGi~~g~dv~kalalG 286 (354)
.|-.+.+++.++.+..+|+|+|+++. |+ +...+.+.+...+.. + +.+ ++=.-++ +..|+..++..|
T Consensus 46 ~~l~i~~p~~~e~a~~~GaD~vilDlEha-------~~~~e~~~~~l~a~~~~~~~~~~~~VRv~~~-~~~di~~~LdaG 117 (339)
T 1izc_A 46 VAHGIPSTFVTKVLAATKPDFVWIDVEHG-------MFNRLELHDAIHAAQHHSEGRSLVIVRVPKH-DEVSLSTALDAG 117 (339)
T ss_dssp EEECSCCHHHHHHHHHTCCSEEEEETTTS-------CCCHHHHHHHHHHHHHHTTTCSEEEEECCTT-CHHHHHHHHHHT
T ss_pred EEEECCCHHHHHHHHhCCCCEEEEECCCC-------CCcHHHHHHHHHHhhhcCCCCCeEEEEeCCC-CHHHHHHHHhCC
Confidence 57777799999999999999999975 43 223332322222221 1 133 3333333 468998889999
Q ss_pred cCEEEE
Q 018519 287 ASGIFI 292 (354)
Q Consensus 287 Ad~V~i 292 (354)
+++|++
T Consensus 118 a~gIml 123 (339)
T 1izc_A 118 AAGIVI 123 (339)
T ss_dssp CSEEEE
T ss_pred CCEEEe
Confidence 999988
No 500
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=70.97 E-value=63 Score=31.25 Aligned_cols=120 Identities=13% Similarity=0.046 Sum_probs=75.0
Q ss_pred ChHHHHHHHHHHHHcCCCEEEEecCCCCCCchhHHhhhccCCCCcCccccccCCccCcCcccchhhHHHHHhhhc-CCcc
Q 018519 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI-DRSL 212 (354)
Q Consensus 134 d~~~~~~~~~~a~~~G~~ai~i~vd~p~~g~r~~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 212 (354)
+++.+.+.++++.+.||+++-+.++... ..| ...+.++.+.+. +..+
T Consensus 201 ~~e~~~~~a~~~~~~Gf~~~KlKvG~~~----~~d----------------------------~~~v~avR~a~G~~~~l 248 (441)
T 4a35_A 201 SDDTLKQLCAQALKDGWTRFKVKVGADL----QDD----------------------------MRRCQIIRDMIGPEKTL 248 (441)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSSCH----HHH----------------------------HHHHHHHHHHHCTTSEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCCCH----HHH----------------------------HHHHHHHHHHhCCCCeE
Confidence 6778888888888899999999876421 111 111222222221 1122
Q ss_pred ccc--ccCCHHHHH----HHHHhCCCEEEEecCCcCCCCCCcChHHHHHHHHHHhc-CCccEEEcCCCCCHHHHHHHHHc
Q 018519 213 SWK--GVLTAEDAR----IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQ-GRIPVFLDGGVRRGTDVFKALAL 285 (354)
Q Consensus 213 ~w~--Gi~~~~~a~----~~~~~G~d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~-~~i~vi~~GGi~~g~dv~kalal 285 (354)
..| +-.++++|. .+.+.++..|- | ...+..++.+.++++.+. ..+||.++--+.+..|+.+++..
T Consensus 249 ~vDaN~~~~~~~A~~~~~~L~~~~~~~iE-------e-P~~~~d~~~~~~l~~~l~~~~iPIa~gE~~~~~~~~~~~l~~ 320 (441)
T 4a35_A 249 MMDANQRWDVPEAVEWMSKLAKFKPLWIE-------E-PTSPDDILGHATISKALVPLGIGIATGEQCHNRVIFKQLLQA 320 (441)
T ss_dssp EEECTTCCCHHHHHHHHHHHGGGCCSEEE-------C-CSCTTCHHHHHHHHHHHGGGTCEEEECTTCCSHHHHHHHHHT
T ss_pred EEECCCCCCHHHHHHHHHhhcccCccEEe-------C-CCCcccHHHHHHHHHhccCCCCCEEeCCccccHHHHHHHHHc
Confidence 222 334666654 34455655552 1 112345777888888632 27999999999999999999998
Q ss_pred C-cCEEEEc
Q 018519 286 G-ASGIFIG 293 (354)
Q Consensus 286 G-Ad~V~ig 293 (354)
| +|.|++-
T Consensus 321 ~a~div~~d 329 (441)
T 4a35_A 321 KALQFLQID 329 (441)
T ss_dssp TCCSEECCC
T ss_pred CCCCEEEEC
Confidence 6 7888874
Done!