BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018523
(354 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q07356|PDS_ARATH 15-cis-phytoene desaturase, chloroplastic/chromoplastic
OS=Arabidopsis thaliana GN=PDS PE=1 SV=1
Length = 566
Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/352 (86%), Positives = 338/352 (96%)
Query: 1 MLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNF 60
MLTWPEK+KFAIGLLPA++GGQAYVEAQDGL+V+EWM KQGVP+RVT EVFIAMSKALNF
Sbjct: 212 MLTWPEKIKFAIGLLPAMVGGQAYVEAQDGLSVKEWMEKQGVPERVTDEVFIAMSKALNF 271
Query: 61 INPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQ 120
INPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLC+P+V+HI+SLGGEV+LNSR++
Sbjct: 272 INPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPVVDHIRSLGGEVQLNSRIK 331
Query: 121 KIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPV 180
KIELNDDGTVK+FLLTNG+ ++GDAYVFA PVDILKL LP+ WKE+ YFK+L+KLVGVPV
Sbjct: 332 KIELNDDGTVKSFLLTNGSTVEGDAYVFAAPVDILKLLLPDPWKEIPYFKKLDKLVGVPV 391
Query: 181 INIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISC 240
IN+HIWFDRKLKNTYDHLLFSRS+LLSVYADMSLTCKEYY+PN+SMLELVFAPAEEWIS
Sbjct: 392 INVHIWFDRKLKNTYDHLLFSRSNLLSVYADMSLTCKEYYDPNRSMLELVFAPAEEWISR 451
Query: 241 SDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPV 300
+DS+IIDATMKEL KLFPDEISADQSKAKI+KYHVVKTPRSVYKTIPNCEPCRPLQRSP+
Sbjct: 452 TDSDIIDATMKELEKLFPDEISADQSKAKILKYHVVKTPRSVYKTIPNCEPCRPLQRSPI 511
Query: 301 EGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRLAEASM 352
EGFYLAGDYTKQKYLASMEGAVLSGK C+Q+IVQDY LLAA G +L+EA++
Sbjct: 512 EGFYLAGDYTKQKYLASMEGAVLSGKFCSQSIVQDYELLAASGPRKLSEATV 563
>sp|P28553|CRTI_SOYBN Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Glycine max
GN=PDS1 PE=2 SV=1
Length = 570
Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/352 (86%), Positives = 334/352 (94%)
Query: 1 MLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNF 60
MLTWPEKVKFAIGLLPA++GGQ YVEAQDGL+VQEWM+KQGVP+RV EVFIAMSKALNF
Sbjct: 218 MLTWPEKVKFAIGLLPAMLGGQPYVEAQDGLSVQEWMKKQGVPERVADEVFIAMSKALNF 277
Query: 61 INPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQ 120
INPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLC+PIV++IQSLGGEV LNSR+Q
Sbjct: 278 INPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDYIQSLGGEVHLNSRIQ 337
Query: 121 KIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPV 180
KIELNDDGTVK+FLL NG V++GDAYVFATPVDILKL LP+NWK + YF+RL+KLVGVPV
Sbjct: 338 KIELNDDGTVKSFLLNNGKVMEGDAYVFATPVDILKLLLPDNWKGIPYFQRLDKLVGVPV 397
Query: 181 INIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISC 240
IN+HIWFDRKLKNTYDHLLFSRS LLSVYADMS+TCKEYY+PNQSMLELVFAPAEEWIS
Sbjct: 398 INVHIWFDRKLKNTYDHLLFSRSPLLSVYADMSVTCKEYYSPNQSMLELVFAPAEEWISR 457
Query: 241 SDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPV 300
SD +II ATM ELAKLFPDEISADQSKAKI+KYHVVKTPRSVYKT+PNCEPCRP+QRSP+
Sbjct: 458 SDDDIIQATMTELAKLFPDEISADQSKAKILKYHVVKTPRSVYKTVPNCEPCRPIQRSPI 517
Query: 301 EGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRLAEASM 352
EGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQD LLA RG+ R+A+AS+
Sbjct: 518 EGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDSELLATRGQKRMAKASV 569
>sp|P80093|PDS_CAPAN 15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Capsicum
annuum GN=PDS PE=1 SV=1
Length = 582
Score = 634 bits (1636), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 299/352 (84%), Positives = 333/352 (94%)
Query: 1 MLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNF 60
MLTWPEKVKFAIGLLPA++GGQ+YVEAQDG++V++WMRKQGVPDRVT EVFIAMSKALNF
Sbjct: 230 MLTWPEKVKFAIGLLPAMLGGQSYVEAQDGISVKDWMRKQGVPDRVTDEVFIAMSKALNF 289
Query: 61 INPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQ 120
INPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLC+PIVEHI+S GG+VRLNSR++
Sbjct: 290 INPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVEHIESKGGQVRLNSRIK 349
Query: 121 KIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPV 180
KIELN+DG+VK F+L +G+ I+GDA+VFATPVDI KL LPE+WKE+ YF++LEKLVGVPV
Sbjct: 350 KIELNEDGSVKCFILNDGSTIEGDAFVFATPVDIFKLLLPEDWKEIPYFQKLEKLVGVPV 409
Query: 181 INIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISC 240
IN+HIWFDRKLKNT D+LLFSRS LLSVYADMS+TCKEYY+PN+SMLELVFAPAEEW+S
Sbjct: 410 INVHIWFDRKLKNTSDNLLFSRSPLLSVYADMSVTCKEYYDPNKSMLELVFAPAEEWVSR 469
Query: 241 SDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPV 300
SDSEIIDATMKELAKLFPDEISADQSKAKI+KYHVVKTPRSVYKT+P CEPCR LQRSPV
Sbjct: 470 SDSEIIDATMKELAKLFPDEISADQSKAKILKYHVVKTPRSVYKTVPGCEPCRLLQRSPV 529
Query: 301 EGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRLAEASM 352
EGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY LL R + +LAE S+
Sbjct: 530 EGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYELLVGRSQRKLAETSV 581
>sp|P28554|CRTI_SOLLC Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Solanum
lycopersicum GN=PDS PE=2 SV=1
Length = 583
Score = 629 bits (1622), Expect = e-179, Method: Compositional matrix adjust.
Identities = 303/352 (86%), Positives = 337/352 (95%)
Query: 1 MLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNF 60
MLTWPEKVKFAIGLLPA++GGQ+YVEAQDG++V++WMRKQGVPDRVT EVFIAMSKALNF
Sbjct: 231 MLTWPEKVKFAIGLLPAMLGGQSYVEAQDGISVKDWMRKQGVPDRVTDEVFIAMSKALNF 290
Query: 61 INPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQ 120
INPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLC+PIVEHI+S GG+VRLNSR++
Sbjct: 291 INPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVEHIESKGGQVRLNSRIK 350
Query: 121 KIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPV 180
KIELN+DG+VK+F+L++G+ I+GDA+VFA PVDI KL LPE+WKE+ YF++LEKLVGVPV
Sbjct: 351 KIELNEDGSVKSFILSDGSAIEGDAFVFAAPVDIFKLLLPEDWKEIPYFQKLEKLVGVPV 410
Query: 181 INIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISC 240
IN+HIWFDRKLKNTYDHLLFSRSSLLSVYADMS+TCKEYYNPNQSMLELVFAPAEEWIS
Sbjct: 411 INVHIWFDRKLKNTYDHLLFSRSSLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWISR 470
Query: 241 SDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPV 300
SDSEIIDATMKELA LFPDEISADQSKAKI+KYHVVKTPRSVYKT+P CEPCRPLQRSP+
Sbjct: 471 SDSEIIDATMKELATLFPDEISADQSKAKILKYHVVKTPRSVYKTVPGCEPCRPLQRSPI 530
Query: 301 EGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRLAEASM 352
EGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY LL R + +L+EAS+
Sbjct: 531 EGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYELLVGRSQKKLSEASV 582
>sp|Q40406|CRTI_NARPS Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Narcissus
pseudonarcissus GN=PDS1 PE=1 SV=1
Length = 570
Score = 628 bits (1620), Expect = e-179, Method: Compositional matrix adjust.
Identities = 295/344 (85%), Positives = 323/344 (93%)
Query: 1 MLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNF 60
MLTWPEKV+FAIGLLPA++GGQAYVEAQDGLTV EWMR+QGVPDRV EVFIAMSKALNF
Sbjct: 217 MLTWPEKVRFAIGLLPAMVGGQAYVEAQDGLTVTEWMRRQGVPDRVNDEVFIAMSKALNF 276
Query: 61 INPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQ 120
INPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLC+PIV+HIQSLGG +LNSR+Q
Sbjct: 277 INPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHIQSLGGRAQLNSRLQ 336
Query: 121 KIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPV 180
KIELN DGTVK+F+L NGN+I GDAYV A PVDILKL LP+ W+E+ YF++L+KLVGVPV
Sbjct: 337 KIELNPDGTVKHFVLGNGNIITGDAYVVAAPVDILKLLLPQEWREIPYFQKLDKLVGVPV 396
Query: 181 INIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISC 240
IN+HIWFDRKLKNTYDHLLF+RS LLSVYADMS+TCKEYY+PN+SMLELVFAPAEEWIS
Sbjct: 397 INVHIWFDRKLKNTYDHLLFTRSPLLSVYADMSVTCKEYYDPNRSMLELVFAPAEEWISR 456
Query: 241 SDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPV 300
SDSEII+ TMKELAKLFPDEI+ADQSKAKI+KYHVVKTPRSVYKTIP+CEPCRPLQRSP+
Sbjct: 457 SDSEIIERTMKELAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTIPDCEPCRPLQRSPI 516
Query: 301 EGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGK 344
EGFYLAGDYT QKYLASMEGAVLSGKLCAQ+IVQDY LL R K
Sbjct: 517 EGFYLAGDYTNQKYLASMEGAVLSGKLCAQSIVQDYELLVRRSK 560
>sp|Q0DUI8|CRTI_ORYSJ Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Oryza sativa
subsp. japonica GN=PDS PE=2 SV=2
Length = 578
Score = 613 bits (1582), Expect = e-175, Method: Compositional matrix adjust.
Identities = 294/342 (85%), Positives = 327/342 (95%)
Query: 1 MLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNF 60
MLTWPEKVKFA+GLLPA++GGQAYVEAQDG TV EWM+KQGVPDRV EVFIAMSKALNF
Sbjct: 224 MLTWPEKVKFALGLLPAMVGGQAYVEAQDGFTVSEWMKKQGVPDRVNDEVFIAMSKALNF 283
Query: 61 INPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQ 120
INPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLC+PIV+H++SLGGEVRLNSR+Q
Sbjct: 284 INPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHVRSLGGEVRLNSRIQ 343
Query: 121 KIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPV 180
KIELN DGTVK+F LT+G I GDAYVFATPVDILKL +P+ WKE++YFK+LEKLVGVPV
Sbjct: 344 KIELNPDGTVKHFALTDGTQITGDAYVFATPVDILKLLVPQEWKEISYFKKLEKLVGVPV 403
Query: 181 INIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISC 240
IN+HIWFDRKLKNTYDHLLFSRSSLLSVYADMS+TCKEYY+PN+SMLELVFAPAEEW+
Sbjct: 404 INVHIWFDRKLKNTYDHLLFSRSSLLSVYADMSVTCKEYYDPNRSMLELVFAPAEEWVGR 463
Query: 241 SDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPV 300
SD+EII+ATM+ELAKLFPDEI+ADQSKAKI+KYHVVKTPRSVYKTIP+CEPCRPLQRSP+
Sbjct: 464 SDTEIIEATMQELAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTIPDCEPCRPLQRSPI 523
Query: 301 EGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAAR 342
EGFYLAGDYTKQKYLASMEGAVLSGKLCAQ++V+DY +L+ R
Sbjct: 524 EGFYLAGDYTKQKYLASMEGAVLSGKLCAQSVVEDYKMLSRR 565
>sp|A2XDA1|CRTI_ORYSI Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Oryza sativa
subsp. indica GN=PDS1 PE=2 SV=2
Length = 578
Score = 613 bits (1582), Expect = e-175, Method: Compositional matrix adjust.
Identities = 294/342 (85%), Positives = 327/342 (95%)
Query: 1 MLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNF 60
MLTWPEKVKFA+GLLPA++GGQAYVEAQDG TV EWM+KQGVPDRV EVFIAMSKALNF
Sbjct: 224 MLTWPEKVKFALGLLPAMVGGQAYVEAQDGFTVSEWMKKQGVPDRVNDEVFIAMSKALNF 283
Query: 61 INPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQ 120
INPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLC+PIV+H++SLGGEVRLNSR+Q
Sbjct: 284 INPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHVRSLGGEVRLNSRIQ 343
Query: 121 KIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPV 180
KIELN DGTVK+F LT+G I GDAYVFATPVDILKL +P+ WKE++YFK+LEKLVGVPV
Sbjct: 344 KIELNPDGTVKHFALTDGTQITGDAYVFATPVDILKLLVPQEWKEISYFKKLEKLVGVPV 403
Query: 181 INIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISC 240
IN+HIWFDRKLKNTYDHLLFSRSSLLSVYADMS+TCKEYY+PN+SMLELVFAPAEEW+
Sbjct: 404 INVHIWFDRKLKNTYDHLLFSRSSLLSVYADMSVTCKEYYDPNRSMLELVFAPAEEWVGR 463
Query: 241 SDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPV 300
SD+EII+ATM+ELAKLFPDEI+ADQSKAKI+KYHVVKTPRSVYKTIP+CEPCRPLQRSP+
Sbjct: 464 SDTEIIEATMQELAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTIPDCEPCRPLQRSPI 523
Query: 301 EGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAAR 342
EGFYLAGDYTKQKYLASMEGAVLSGKLCAQ++V+DY +L+ R
Sbjct: 524 EGFYLAGDYTKQKYLASMEGAVLSGKLCAQSVVEDYKMLSRR 565
>sp|P49086|CRTI_MAIZE Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Zea mays
GN=PDS1 PE=2 SV=1
Length = 571
Score = 603 bits (1555), Expect = e-172, Method: Compositional matrix adjust.
Identities = 293/347 (84%), Positives = 322/347 (92%)
Query: 1 MLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNF 60
MLTWPEKVKFAIGLLPA++GGQ YVEAQDGLTV EWM+KQGVPDRV EVFIAMSKALNF
Sbjct: 216 MLTWPEKVKFAIGLLPAMVGGQPYVEAQDGLTVSEWMKKQGVPDRVNDEVFIAMSKALNF 275
Query: 61 INPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQ 120
INPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLC+PIV+HI+S GGEVRLNSR++
Sbjct: 276 INPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHIRSRGGEVRLNSRIK 335
Query: 121 KIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPV 180
KIELN DGTVK+F L++G I GDAYV ATPVDI KL +P+ W E+ YFK+LEKLVGVPV
Sbjct: 336 KIELNPDGTVKHFALSDGTQITGDAYVCATPVDIFKLLVPQEWSEITYFKKLEKLVGVPV 395
Query: 181 INIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISC 240
IN+HIWFDRKL NTYDHLLFSRSSLLSVYADMS+TCKEYY+PN+SMLELVFAPA+EWI
Sbjct: 396 INVHIWFDRKLNNTYDHLLFSRSSLLSVYADMSVTCKEYYDPNRSMLELVFAPADEWIGR 455
Query: 241 SDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPV 300
SD+EIIDATM+ELAKLFPDEI+ADQSKAKI+KYH+VKTPRSVYKT+PNCEPCRPLQRSP+
Sbjct: 456 SDTEIIDATMEELAKLFPDEIAADQSKAKILKYHIVKTPRSVYKTVPNCEPCRPLQRSPI 515
Query: 301 EGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRL 347
EGFYLAGDYTKQKYLASMEGAVLSGKLCAQ+IVQDY LA R + L
Sbjct: 516 EGFYLAGDYTKQKYLASMEGAVLSGKLCAQSIVQDYSRLALRSQKSL 562
>sp|P26294|PDS_SYNE7 15-cis-phytoene desaturase OS=Synechococcus elongatus (strain PCC
7942) GN=pds PE=1 SV=1
Length = 474
Score = 428 bits (1100), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/358 (59%), Positives = 263/358 (73%), Gaps = 7/358 (1%)
Query: 1 MLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNF 60
MLTW EK+KF +GLLPA+I GQ+YVE D + EW+RKQ +P+RV EVFIAM+KALNF
Sbjct: 119 MLTWEEKIKFGLGLLPAMIRGQSYVEEMDQYSWTEWLRKQNIPERVNDEVFIAMAKALNF 178
Query: 61 INPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQ 120
I+PDE+S +L ALNRFLQEK GS MAFLDG PPERLC PIVEH+Q+ GG+V LN+ ++
Sbjct: 179 IDPDEISATVVLTALNRFLQEKKGSMMAFLDGAPPERLCQPIVEHVQARGGDVLLNAPLK 238
Query: 121 KIELNDDGTVKNFLLTN-----GNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKL 175
+ LNDD +V+ F + +I+ DAYV A PVD LKL LP+ WK M YF++L+ L
Sbjct: 239 EFVLNDDSSVQAFRIAGIKGQEEQLIEADAYVSALPVDPLKLLLPDAWKAMPYFQQLDGL 298
Query: 176 VGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAE 235
GVPVINIH+WFDRKL + DHLLFSRS LLSVYADMS TC+EY +P++SMLELVFAPA+
Sbjct: 299 QGVPVINIHLWFDRKLTDI-DHLLFSRSPLLSVYADMSNTCREYEDPDRSMLELVFAPAK 357
Query: 236 EWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPL 295
+WI SD +I+ ATM E+ KLFP S ++ A++ KY +VKTP SVYK P + RP
Sbjct: 358 DWIGRSDEDILAATMAEIEKLFPQHFSG-ENPARLRKYKIVKTPLSVYKATPGRQQYRPD 416
Query: 296 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRLAEASMC 353
Q SP+ F+L GDYT Q+YLASMEGAVLSGKL AQAI+ L R GR AS
Sbjct: 417 QASPIANFFLTGDYTMQRYLASMEGAVLSGKLTAQAIIARQDELQRRSSGRPLAASQA 474
>sp|P29273|CRTI_SYNY3 Phytoene dehydrogenase OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=pds PE=3 SV=2
Length = 472
Score = 426 bits (1094), Expect = e-118, Method: Compositional matrix adjust.
Identities = 208/341 (60%), Positives = 256/341 (75%), Gaps = 7/341 (2%)
Query: 1 MLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNF 60
MLTWPEK++F +GLLPAI+ GQ+YVE D T EWM KQ +P R+ EVFIAMSKALNF
Sbjct: 119 MLTWPEKIRFGLGLLPAIVQGQSYVEEMDKYTWSEWMAKQNIPPRIEKEVFIAMSKALNF 178
Query: 61 INPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQ 120
I+PDE+S +L ALNRFLQEK+GSKMAFLDG PPERLC P+V++I GGEV +N ++
Sbjct: 179 IDPDEISATILLTALNRFLQEKNGSKMAFLDGAPPERLCQPLVDYITERGGEVHINKPLK 238
Query: 121 KIELNDDGTVKNFLLTN-----GNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKL 175
+I LN+DG+VK +L+ VI D YV A PVD LK +P W+E FK+++ L
Sbjct: 239 EILLNEDGSVKGYLIRGLDGAPDEVITADLYVSAMPVDPLKTMVPAPWREYPEFKQIQGL 298
Query: 176 VGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAE 235
GVPVIN+H+WFDRKL + DHLLFSRS LLSVYADMS TC+EY +P++SMLELV APA+
Sbjct: 299 EGVPVINLHLWFDRKLTDI-DHLLFSRSPLLSVYADMSNTCREYSDPDKSMLELVLAPAQ 357
Query: 236 EWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPL 295
+WI SD EI+ ATM E+ +LFP + D + A+++K HVVKTPRSVYK P + CRP
Sbjct: 358 DWIGKSDEEIVAATMAEIKQLFPQHFNGD-NPARLLKSHVVKTPRSVYKATPGRQACRPD 416
Query: 296 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY 336
QR+ V FYLAGD+T QKYL SMEGAVLSGK CAQAI D+
Sbjct: 417 QRTSVPNFYLAGDFTMQKYLGSMEGAVLSGKQCAQAIAADF 457
>sp|Q31N27|ZDS_SYNE7 Probable zeta-carotene desaturase OS=Synechococcus elongatus
(strain PCC 7942) GN=zds PE=3 SV=1
Length = 481
Score = 179 bits (454), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 195/369 (52%), Gaps = 35/369 (9%)
Query: 2 LTWPEKVK--FAIGLLPAIIGGQAY------VEAQDGLTVQEWMRKQGVPDRVTTEVFIA 53
LTW +K++ A+G P + G Y + A D ++ +W R G + ++
Sbjct: 118 LTWLDKLQNALALGTSPLVRGILDYEGAMKIIRALDRISFADWFRSHGGSEGSLKRMWNP 177
Query: 54 MSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEV 113
++ AL FI+ + +S +C+L F + SK+ L G+P E L PI+++IQ+ G +
Sbjct: 178 IAYALGFIDTENISARCMLTVFQMFAAKTEASKLNLLAGSPAEYLHKPILDYIQARGATL 237
Query: 114 RLNSRVQKIEL---NDDGTVKNFLLTNGNVID---GDAYVFATPVDILKLQLPENWKEMA 167
L RV++IE N V + +G+ ++ D Y+ A V ++ LPE W++ +
Sbjct: 238 HLRRRVREIEYTETNGQTVVTGLQIADGDAVERVEADVYLAACDVPGIQRLLPEAWRKWS 297
Query: 168 YFKRLEKLVGVPVINIHIWFD--------RKLKNTYDH------LLFSRSSLLSVYADMS 213
F + KL VPV + + FD R+ ++ DH LL++ + S + D++
Sbjct: 298 EFDNIYKLDAVPVATVQLRFDGWVTELGDREKRHQLDHATGLDNLLYTADADFSCFTDLA 357
Query: 214 LTC-KEYYNPNQ-SMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIV 271
L+ K+YY Q S+L+ V P + +I+ + +I +K++ +LFP + + +
Sbjct: 358 LSSPKDYYRKGQGSLLQCVLTPGDPFIAMKNEDIAQHVLKQVHELFPSSRDLNMTWS--- 414
Query: 272 KYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQA 331
+VVK +S+Y+ P +P RP Q++P+ F+LAG YT+Q Y+ SMEGA +SG+ A+A
Sbjct: 415 --NVVKLAQSLYREAPGMDPFRPDQKTPIANFFLAGSYTQQDYIDSMEGATISGRRAAKA 472
Query: 332 IVQDYVLLA 340
+++ + A
Sbjct: 473 MLEAQAIAA 481
>sp|P74306|ZDS_SYNY3 Zeta-carotene desaturase OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=crtQ PE=3 SV=1
Length = 489
Score = 160 bits (406), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 180/343 (52%), Gaps = 28/343 (8%)
Query: 20 GGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFL 79
G + D ++ EW +G + +++ ++ AL FI+ + +S +C+L F
Sbjct: 144 GAMKTIRDLDRISFAEWFLSKGGNEGSLKKMWDPIAYALGFIDTENISARCMLTIFQLFA 203
Query: 80 QEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIE--LNDDGTVKNFLLTN 137
S + L+G+P E L PI E+++ G + +V++I+ + D T L+ N
Sbjct: 204 ARTEASVLRMLEGSPQEYLHKPIQEYLEQRGTKFYTRHKVKEIKTKVTDGETRVTGLIIN 263
Query: 138 GNV----IDGDAYVFATPVDILKLQLPENWK-EMAYFKRLEKLVGVPVINIHIWFD---- 188
V + DAYV A V +K LPENW+ + +F ++ L VPV + + FD
Sbjct: 264 DGVETKTVTADAYVAACDVPGIKNLLPENWRTQWDFFNKIYYLDTVPVATVQLRFDGWVT 323
Query: 189 --------RKLKNTY--DHLLFSRSSLLSVYADMSLTC-KEYYNPNQ-SMLELVFAPAEE 236
++L+ + D+LL++ + S +AD++LT +YY P + S+L+LV P +
Sbjct: 324 EMNDPAKRKQLEQAFGLDNLLYTSDAEFSCFADLALTSPADYYRPGEGSLLQLVLTPGDP 383
Query: 237 WISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQ 296
++ S+ I +K++ LFP +AD + + Y V+K +S+Y+ P + RP Q
Sbjct: 384 FMKESNEAIAYRVLKQVKALFPS--AADLN---MTWYSVIKLAQSLYREAPGMDLFRPSQ 438
Query: 297 RSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLL 339
+P+ F+LAG YT+Q Y+ SMEGA LSG+ AQAI+ + L
Sbjct: 439 ATPIANFFLAGSYTQQDYIDSMEGATLSGRQAAQAILANQARL 481
>sp|Q9SE20|ZDS_SOLLC Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Solanum
lycopersicum GN=ZDS PE=2 SV=1
Length = 588
Score = 160 bits (406), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/345 (31%), Positives = 175/345 (50%), Gaps = 29/345 (8%)
Query: 29 DGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMA 88
D ++ EW +G ++ ++ AL FI+ D +S +C+L F + S +
Sbjct: 232 DNVSFSEWFLSKGGTRASIQRMWDPVAYALGFIDCDNMSARCMLTIFALFATKTEASLLR 291
Query: 89 FLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKI--ELNDDGTVKNFLL-----TNGNVI 141
L G+P L PI ++I GG L +++ E + DG++ L T ++
Sbjct: 292 MLKGSPDVYLSGPIKKYIMDKGGRFHLRWGCREVLYETSSDGSMYVSGLAMSKATQKKIV 351
Query: 142 DGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFD------------R 189
DAYV A V +K +P+ W+E+ +F + KLVGVPV+ + + ++ R
Sbjct: 352 KADAYVAACDVPGIKRLVPQKWRELEFFDNIYKLVGVPVVTVQLRYNGWVTELQDLERSR 411
Query: 190 KLKNT--YDHLLFSRSSLLSVYADMSLTC-KEYYNPNQ-SMLELVFAPAEEWISCSDSEI 245
+LK D+LL++ + S +AD++L +YY Q S+L+ V P + ++ S+ EI
Sbjct: 412 QLKRAAGLDNLLYTPDADFSCFADLALASPDDYYIEGQGSLLQCVLTPGDPYMPLSNDEI 471
Query: 246 IDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYL 305
I K++ LFP ++ V+K +S+Y+ P +P RP Q++PVE F+L
Sbjct: 472 IKRVTKQVLALFPSS-----QGLEVTWSSVLKIGQSLYREGPGKDPFRPDQKTPVENFFL 526
Query: 306 AGDYTKQKYLASMEGAVLSGKLCAQAIVQ-DYVLLAARGKGRLAE 349
AG YTKQ Y+ SMEGA LSG+ + I L+A R K AE
Sbjct: 527 AGSYTKQDYIDSMEGATLSGRQASAYICNVGEQLMALRKKITAAE 571
>sp|Q9R6X4|ZDS_NOSS1 Zeta-carotene desaturase OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=crtQ PE=3 SV=2
Length = 479
Score = 158 bits (399), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 174/338 (51%), Gaps = 27/338 (7%)
Query: 20 GGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFL 79
G + D ++ +W R G + ++ ++ AL FI+ + +S +C+L F
Sbjct: 144 GAMKTIRNLDKISFADWFRSHGGSNGSIKRMWNPIAYALGFIDCENISARCMLTIFQFFA 203
Query: 80 QEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKI---ELNDDGTVKNFLLT 136
S + L+G+P E L PI+ ++++ G +V +V++I E V ++
Sbjct: 204 VRSEASVLRMLEGSPDEYLHQPILRYLEARGTKVYTRRQVREIKYAEAEGQTRVTGIVVA 263
Query: 137 NGNVID---GDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFD----- 188
G+ ++ DAYV A + ++ LP+ W++ + F + KL VPV + + FD
Sbjct: 264 KGDEVEEITADAYVCACDIPGIQRVLPQEWRKWSEFDNIYKLDAVPVATVQMRFDGWVTE 323
Query: 189 -------RKLKNT--YDHLLFSRSSLLSVYADMSLTC-KEYYNPNQ-SMLELVFAPAEEW 237
++LK D+LL++ + S +AD++LT +YY Q S+L+LV P + +
Sbjct: 324 LQDENKRKQLKEAAGLDNLLYTADADFSCFADLALTSPSDYYRQGQGSLLQLVLTPGDPF 383
Query: 238 ISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQR 297
I S+ I +K++ +LFP + + Y VVK +S+Y+ P + RP Q+
Sbjct: 384 IKESNEAIAQHVLKQVYELFPSS-----RELNMTWYSVVKLAQSLYREAPGMDVYRPNQK 438
Query: 298 SPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQD 335
+P+ F+LAG YT+Q Y+ SMEGA +SG+ A+ I+ +
Sbjct: 439 TPIANFFLAGSYTQQDYIDSMEGATVSGRRAAKVILDN 476
>sp|Q9FV46|ZDS_TARER Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Tagetes
erecta PE=2 SV=1
Length = 587
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 167/345 (48%), Gaps = 28/345 (8%)
Query: 20 GGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFL 79
G + D ++ EW +G ++ ++ AL FI+ D +S +C+L + F
Sbjct: 226 GAMTQIRNLDNISFSEWFMSKGGTRTSIQRMWDPVAYALGFIDCDNISARCMLTIFSLFA 285
Query: 80 QEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---- 135
+ S + L G+P L PI ++I GG L ++I + ++
Sbjct: 286 TKTEASLLRMLKGSPDVYLSGPIRDYIIEKGGRFHLRWGCREILYEKSANGETYVTGLAM 345
Query: 136 ---TNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFD---- 188
T ++ D Y+ A V +K LP NW+E +F + KLVGVPV+ + + ++
Sbjct: 346 SKATQKQIVKADVYIAACDVPGIKRLLPSNWREWEFFDNIYKLVGVPVVTVQLRYNGWVT 405
Query: 189 --------RKLKNT--YDHLLFSRSSLLSVYADMSLTCKE-YYNPNQ-SMLELVFAPAEE 236
R+L+ D+LL++ + S +AD++L E YY Q S+L+ V P +
Sbjct: 406 ELQDVERSRQLRQAAGLDNLLYTPDADFSCFADLALASPEDYYIEGQGSLLQCVLTPGDP 465
Query: 237 WISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQ 296
++ + EII K++ LFP ++ VVK +S+Y+ P +P RP Q
Sbjct: 466 YMPLPNEEIISRVSKQVLALFPSS-----QGLEVTWSSVVKIGQSLYREGPGKDPFRPDQ 520
Query: 297 RSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAA 341
++PV+ F+LAG YTKQ Y+ SMEGA LSG+ + I LAA
Sbjct: 521 KTPVKNFFLAGSYTKQDYIDSMEGATLSGRQASAFICDAGEELAA 565
>sp|Q9ZTP4|ZDS_MAIZE Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Zea mays
GN=ZDS1 PE=2 SV=1
Length = 570
Score = 157 bits (397), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 168/336 (50%), Gaps = 28/336 (8%)
Query: 20 GGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFL 79
G V D ++ +W +G T ++ + AL FI+ D +S +C+L F
Sbjct: 208 GALQQVRDLDDISFSDWFMSKGGTRESITRMWDPVRYALGFIDCDNISARCMLTIFTLFA 267
Query: 80 QEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKI--ELNDDGT--VKNFLL 135
+ S + L G+P L PI ++I GG L +++ E + DG VK LL
Sbjct: 268 TKTEASLLRMLKGSPDVYLSGPIKKYITDRGGRFHLRWGCREVLYEKSPDGETYVKGLLL 327
Query: 136 TNGN---VIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFD---- 188
T +I DAYV A V +K LP W+E F + KL GVPV+ + + ++
Sbjct: 328 TKATSREIIKADAYVAACDVPGIKRLLPSEWREWEMFDNIYKLDGVPVVTVQLRYNGWVT 387
Query: 189 --------RKLKNT--YDHLLFSRSSLLSVYADMSLTC-KEYYNPNQ-SMLELVFAPAEE 236
R+L+ D+LL++ + S ++D++L+ +YY Q S+++ V P +
Sbjct: 388 ELQDLEKSRQLQRAVGLDNLLYTADADFSCFSDLALSSPADYYIEGQGSLIQAVLTPGDP 447
Query: 237 WISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQ 296
++ + EII K++ +LFP ++ VVK +S+Y+ P +P RP Q
Sbjct: 448 YMPLPNEEIISKVQKQVVELFPSS-----RGLEVTWSSVVKIGQSLYREAPGNDPFRPDQ 502
Query: 297 RSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAI 332
++PV+ F+L+G YTKQ Y+ SMEGA LSG+ + I
Sbjct: 503 KTPVKNFFLSGSYTKQDYIDSMEGATLSGRRTSAYI 538
>sp|Q9SMJ3|ZDS_CAPAN Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Capsicum
annuum GN=ZDS PE=1 SV=1
Length = 588
Score = 156 bits (394), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 171/345 (49%), Gaps = 29/345 (8%)
Query: 29 DGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMA 88
D ++ +W +G ++ ++ AL FI+ D +S +C+L F + S +
Sbjct: 232 DSVSFSDWFMSKGGTRASIQRMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLR 291
Query: 89 FLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKI--ELNDDGTVKNFLL-----TNGNVI 141
L G+P L PI ++I GG L +++ E + DG++ L T ++
Sbjct: 292 MLKGSPDVYLSGPIKKYIIDKGGRFHLRWGCREVLYETSSDGSMYVSGLAMSKATQKKIV 351
Query: 142 DGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFD------------- 188
DAYV A V +K +P+ W+E+ +F + KL+GVPV+ + + ++
Sbjct: 352 KADAYVAACVVPGIKRLVPQKWRELEFFGNIYKLIGVPVVTVQLRYNGWVTELQDLERSR 411
Query: 189 -RKLKNTYDHLLFSRSSLLSVYADMSLTCKE-YYNPNQ-SMLELVFAPAEEWISCSDSEI 245
K D+LL++ + S +AD++L E YY Q S+L+ V P + ++ + EI
Sbjct: 412 QSKRATGLDNLLYTPDADFSCFADLALASPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEI 471
Query: 246 IDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYL 305
I K++ LFP ++ VVK +S+Y+ P +P RP Q++PVE F+L
Sbjct: 472 IRRVSKQVLALFPSS-----QGLEVTWSSVVKIGQSLYREGPGKDPFRPDQKTPVENFFL 526
Query: 306 AGDYTKQKYLASMEGAVLSGKLCAQAIVQ-DYVLLAARGKGRLAE 349
AG YTKQ Y+ SMEGA LSG+ + I LLA R K AE
Sbjct: 527 AGSYTKQDYIDSMEGATLSGRQASAYICDAGEQLLALRKKIAAAE 571
>sp|Q38893|ZDS_ARATH Zeta-carotene desaturase, chloroplastic/chromoplastic
OS=Arabidopsis thaliana GN=ZDS1 PE=1 SV=3
Length = 558
Score = 153 bits (386), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 174/358 (48%), Gaps = 28/358 (7%)
Query: 20 GGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFL 79
G + D ++ +W +G ++ ++ AL FI+ D +S +C+L + F
Sbjct: 200 GAMRDIRNLDSISFSDWFLSKGGTRASIQRMWDPVAYALGFIDCDNMSARCMLTIFSLFA 259
Query: 80 QEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---- 135
+ S + L G+P L PI ++I GG + L ++I + + ++
Sbjct: 260 TKTEASLLRMLKGSPDVYLSGPIKQYITDRGGRIHLRWGCREILYDKSADGETYVTGLAI 319
Query: 136 ---TNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFD---- 188
TN ++ D YV A V +K LP+ W+E +F + +L GVPV+ + + ++
Sbjct: 320 SKATNKKIVKADVYVAACDVPGIKRLLPKEWRESRFFNDIYELEGVPVVTVQLRYNGWVT 379
Query: 189 --------RKLKNT--YDHLLFSRSSLLSVYADMSLTC-KEYYNPNQ-SMLELVFAPAEE 236
R+LK D+LL++ + S +AD++L +YY Q ++L+ V P +
Sbjct: 380 ELQDIELARQLKRAVGLDNLLYTPDADFSCFADLALASPADYYIEGQGTLLQCVLTPGDP 439
Query: 237 WISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQ 296
++ + +II+ ++ +LFP ++ VVK +S+Y+ P +P RP Q
Sbjct: 440 YMRMPNDKIIEKVAMQVTELFPS-----SRGLEVTWSSVVKIAQSLYREAPGKDPFRPDQ 494
Query: 297 RSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRLAEASMCP 354
++P++ F+LAG YTKQ Y+ SMEGA LSG+ + I LA K + A+ P
Sbjct: 495 KTPIKNFFLAGSYTKQDYIDSMEGATLSGRQASSYICDAGEELAELNKKLSSSATAVP 552
>sp|O49901|ZDS_NARPS Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Narcissus
pseudonarcissus GN=ZDS1 PE=2 SV=1
Length = 574
Score = 150 bits (380), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 171/345 (49%), Gaps = 28/345 (8%)
Query: 20 GGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFL 79
G + D ++ +W +G ++ ++ AL FI+ D +S +C+L + F
Sbjct: 208 GAMQDIRNLDNISFSDWFLSKGGTRMSIQRMWDPVAYALGFIDCDNISARCMLTIFSLFA 267
Query: 80 QEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKI---EL-NDDGTVKNFLL 135
+ S + L G+P L PI ++I GG L ++I EL N D + +
Sbjct: 268 TKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDELSNGDTYITGIAM 327
Query: 136 ---TNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFD---- 188
TN ++ D YV A V +K +P W+E F + KLVGVPV+ + + ++
Sbjct: 328 SKATNKKLVKADVYVAACDVPGIKRLIPSEWREWDLFDNIYKLVGVPVVTVQLRYNGWVT 387
Query: 189 --------RKLKNT--YDHLLFSRSSLLSVYADMSLTCKE-YYNPNQ-SMLELVFAPAEE 236
R+L+ D+LL++ + S ++D++L+ E YY Q S+++ V P +
Sbjct: 388 EMQDLEKSRQLRAAVGLDNLLYTPDADFSCFSDLALSSPEDYYIEGQGSLIQAVLTPGDP 447
Query: 237 WISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQ 296
++ + II+ K++ LFP +++ VVK +S+Y+ P +P RP Q
Sbjct: 448 YMPLPNDAIIERVRKQVLDLFPS-----SQGLEVLWSSVVKIGQSLYREGPGKDPFRPDQ 502
Query: 297 RSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAA 341
++PV+ F+LAG YTKQ Y+ SMEGA LSG+ A I LAA
Sbjct: 503 KTPVKNFFLAGSYTKQDYIDSMEGATLSGRQAAAYICSAGEDLAA 547
>sp|Q9SKX5|PAO2_ARATH Probable polyamine oxidase 2 OS=Arabidopsis thaliana GN=PAO2 PE=2
SV=1
Length = 490
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 100/244 (40%), Gaps = 48/244 (19%)
Query: 110 GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKL-------QLPEN 162
G ++R+ RV KI +G NG DA V A P+ +LK +LPE
Sbjct: 237 GLDIRVGHRVTKIVRRYNGV--KVTTENGQTFVADAAVIAVPLGVLKSGTIKFEPKLPE- 293
Query: 163 WKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNP 222
WK+ A + ++ + + K+ ++ + + + L V A+ S C + N
Sbjct: 294 WKQEA------------INDLGVGIENKIILHFEKVFWPKVEFLGVVAETSYGCSYFLNL 341
Query: 223 NQSMLE--LVFAPAEEWIS----CSDSEIIDATMKELAKLFPDEI----------SADQS 266
+++ LV+ PA + SD + + +L ++ PD + +D +
Sbjct: 342 HKATGHPVLVYMPAGQLAKDIEKMSDEAAANFAVLQLQRILPDALPPVQYLVSRWGSDVN 401
Query: 267 KAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGK 326
Y +V P +Y+ + R PV+ + AG+ T + S+ GA +G
Sbjct: 402 SMGSYSYDIVGKPHDLYERL----------RVPVDNLFFAGEATSSSFPGSVHGAYSTGL 451
Query: 327 LCAQ 330
+ A+
Sbjct: 452 MAAE 455
>sp|Q8H191|PAO4_ARATH Probable polyamine oxidase 4 OS=Arabidopsis thaliana GN=PAO4 PE=1
SV=1
Length = 497
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 91/235 (38%), Gaps = 33/235 (14%)
Query: 112 EVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKR 171
++RLN RV K+ + V + N + DA + P+ +LK L + E+ +K
Sbjct: 240 DIRLNHRVTKVVRTSNNKVIVAVEGGTNFV-ADAVIITVPIGVLKANLIQFEPELPQWKT 298
Query: 172 LEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLE--L 229
+ G+ V N + K+ +D + L + A S C + N +++ L
Sbjct: 299 -SAISGLGVGN-----ENKIALRFDRAFWPNVEFLGMVAPTSYACGYFLNLHKATGHPVL 352
Query: 230 VFAPA----EEWISCSDSEIIDATMKELAKLFPD----------EISADQSKAKIVKYHV 275
V+ A ++ SD + M +L K+FPD D + Y V
Sbjct: 353 VYMAAGNLAQDLEKLSDEATANFVMLQLKKMFPDAPDPAQYLVTRWGTDPNTLGCYAYDV 412
Query: 276 VKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQ 330
V P +Y P PV+ + G+ ++ S GA L+G +Q
Sbjct: 413 VGMPEDLY----------PRLGEPVDNIFFGGEAVNVEHQGSAHGAFLAGVSASQ 457
>sp|P55349|Y4AB_RHISN Uncharacterized protein y4aB OS=Rhizobium sp. (strain NGR234)
GN=NGR_a00450 PE=4 SV=1
Length = 417
Score = 39.7 bits (91), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 96/237 (40%), Gaps = 38/237 (16%)
Query: 98 LCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDG--DAYVFATPVDIL 155
L P V+ ++ G VRL+ +++K+ + + + + + G DA + A P
Sbjct: 205 LVEPAVKLLERRGATVRLSHKLRKLAKSAE-IISELDFGDDKIAVGPDDAVILAVPPRAA 263
Query: 156 KLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLT 215
LP K F+ V+N H FD + +L V
Sbjct: 264 ATLLP-GLKTPTEFRA--------VVNAHFRFDPPV---------GADPILGVVG----- 300
Query: 216 CKEYYNPNQSMLELVFA-PAEEWISCSDSE-IIDATMKELAK-LFPDEISADQSKAKIVK 272
++E +FA P ++ S+ + ++D +E+ + ++ D A ++
Sbjct: 301 ---------GLVEWLFAYPQRLSVTISNGDRLLDIPREEVVRVIWRDVCEAGGISGELPP 351
Query: 273 YHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCA 329
+ +V R+ ++ P RP + + +LAGD+T A++EG+V SG A
Sbjct: 352 WQIVCERRATFQATPEQNALRPGPVTGCKNLFLAGDWTATGLPATIEGSVRSGNRAA 408
>sp|P76150|YNEK_ECOLI Uncharacterized protein YneK OS=Escherichia coli (strain K12)
GN=yneK PE=4 SV=1
Length = 371
Score = 35.4 bits (80), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 204 SLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISA 263
+L +A+M L ++ NPN+S L V PA S SD +II + KLF
Sbjct: 282 NLFLFFANMLLHYHQFMNPNESDLNDVLMPA----SLSDDKIIKHMARRTLKLF----VK 333
Query: 264 DQSKAKIVKYHVVKT-PRS 281
+++ K+ +VK PRS
Sbjct: 334 NETPPKVTHEDLVKNRPRS 352
>sp|O60341|KDM1A_HUMAN Lysine-specific histone demethylase 1A OS=Homo sapiens GN=KDM1A
PE=1 SV=2
Length = 852
Score = 35.0 bits (79), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 101/272 (37%), Gaps = 47/272 (17%)
Query: 99 CLPIVEHIQSLGGEVRLNSRVQKIELNDDG----TVKNFLLTNGNVIDGDAYVFATPVDI 154
C+P+ + G +++LN+ V+++ G V + + DA + P+ +
Sbjct: 573 CVPVA---LAEGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGV 629
Query: 155 LKLQ---------LPENWKEMAY----FKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFS 201
LK Q LPE WK A F L K+V + FDR + +L
Sbjct: 630 LKQQPPAVQFVPPLPE-WKTSAVQRMGFGNLNKVV--------LCFDRVFWDPSVNLFGH 680
Query: 202 RSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWI-SCSDSEIIDATMKELAKLFPDE 260
S + ++ L Y P +L LV A + + SD I+ + L +F
Sbjct: 681 VGSTTASRGELFLFWNLYKAP--ILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSS 738
Query: 261 ISADQSKAKIVKYHVVKTPRSVYKTIPNCE---------------PCRPLQRSPVEGFYL 305
+ + ++ R Y + P P P+ +
Sbjct: 739 AVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFF 798
Query: 306 AGDYTKQKYLASMEGAVLSGKLCAQAIVQDYV 337
AG++T + Y A++ GA+LSG A I ++
Sbjct: 799 AGEHTIRNYPATVHGALLSGLREAGRIADQFL 830
>sp|Q6ZQ88|KDM1A_MOUSE Lysine-specific histone demethylase 1A OS=Mus musculus GN=Kdm1a
PE=1 SV=2
Length = 853
Score = 35.0 bits (79), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 101/272 (37%), Gaps = 47/272 (17%)
Query: 99 CLPIVEHIQSLGGEVRLNSRVQKIELNDDG----TVKNFLLTNGNVIDGDAYVFATPVDI 154
C+P+ + G +++LN+ V+++ G V + + DA + P+ +
Sbjct: 574 CVPVA---LAEGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGV 630
Query: 155 LKLQ---------LPENWKEMAY----FKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFS 201
LK Q LPE WK A F L K+V + FDR + +L
Sbjct: 631 LKQQPPAVQFVPPLPE-WKTSAVQRMGFGNLNKVV--------LCFDRVFWDPSVNLFGH 681
Query: 202 RSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWI-SCSDSEIIDATMKELAKLFPDE 260
S + ++ L Y P +L LV A + + SD I+ + L +F
Sbjct: 682 VGSTTASRGELFLFWNLYKAP--ILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSS 739
Query: 261 ISADQSKAKIVKYHVVKTPRSVYKTIPNCE---------------PCRPLQRSPVEGFYL 305
+ + ++ R Y + P P P+ +
Sbjct: 740 AVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFF 799
Query: 306 AGDYTKQKYLASMEGAVLSGKLCAQAIVQDYV 337
AG++T + Y A++ GA+LSG A I ++
Sbjct: 800 AGEHTIRNYPATVHGALLSGLREAGRIADQFL 831
>sp|B8GJK8|EF2_METPE Elongation factor 2 OS=Methanosphaerula palustris (strain ATCC
BAA-1556 / DSM 19958 / E1-9c) GN=fusA PE=3 SV=1
Length = 730
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 22 QAYVEAQDGLTVQEWMRKQG--VPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFL 79
Q ++E +D L W + + + D TT +FI M+K + ++N +M+ IL L+ L
Sbjct: 513 QTWIERRDILVANGWEKDEAKNIKDISTTNIFIDMTKGVQYLNE---TMELILEGLHEAL 569
Query: 80 Q 80
Q
Sbjct: 570 Q 570
>sp|A7HDA9|PURA_ANADF Adenylosuccinate synthetase OS=Anaeromyxobacter sp. (strain
Fw109-5) GN=purA PE=3 SV=1
Length = 431
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 5/39 (12%)
Query: 156 KLQLPENWKEM-----AYFKRLEKLVGVPVINIHIWFDR 189
KL+ +W ++ AY KR+E+LVGVPV+ + + DR
Sbjct: 381 KLEDLRSWDDLPPRARAYVKRVEQLVGVPVVGLSVGADR 419
>sp|Q48A17|PURA_COLP3 Adenylosuccinate synthetase OS=Colwellia psychrerythraea (strain
34H / ATCC BAA-681) GN=purA PE=3 SV=1
Length = 431
Score = 33.5 bits (75), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Query: 144 DAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDR 189
++ V AT VD+L PEN +AY KR+E++ G+PV I DR
Sbjct: 381 ESTVGATSVDVL----PEN--ALAYIKRIEEITGIPVDIISTGPDR 420
>sp|A2XDG4|UBP26_ORYSI Ubiquitin carboxyl-terminal hydrolase 26 OS=Oryza sativa subsp.
indica GN=UBP26 PE=2 SV=1
Length = 1079
Score = 33.5 bits (75), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 61 INPDELSMQCILIALNRFLQEKHGSKMAFLDGNP 94
+ PD L M +L L R + H SKMAF+D P
Sbjct: 137 LEPDILKMHPVLDQLARLFAQLHSSKMAFIDSAP 170
>sp|A3AF13|UBP26_ORYSJ Ubiquitin carboxyl-terminal hydrolase 26 OS=Oryza sativa subsp.
japonica GN=UBP26 PE=2 SV=2
Length = 1079
Score = 33.5 bits (75), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 61 INPDELSMQCILIALNRFLQEKHGSKMAFLDGNP 94
+ PD L M +L L R + H SKMAF+D P
Sbjct: 137 LEPDILKMHPVLDQLARLFAQLHSSKMAFIDSAP 170
>sp|C0LGF5|Y1341_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g34110
OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2
Length = 1072
Score = 33.1 bits (74), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 18/65 (27%)
Query: 18 IIGGQAYVEAQ--DGLTVQEWMRK----------------QGVPDRVTTEVFIAMSKALN 59
I+ G++ VE Q DGL + EW++K QG+PD++ E+ + A+
Sbjct: 971 ILSGRSAVEPQIGDGLHIVEWVKKKMGTFEPALSVLDVKLQGLPDQIVQEMLQTLGIAMF 1030
Query: 60 FINPD 64
+NP
Sbjct: 1031 CVNPS 1035
>sp|O64411|PAO_MAIZE Polyamine oxidase OS=Zea mays GN=PAO PE=1 SV=1
Length = 500
Score = 33.1 bits (74), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 57/136 (41%), Gaps = 7/136 (5%)
Query: 201 SRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDE 260
SR V+ + K+Y + N ++ + + SD + M+ L K+FP +
Sbjct: 352 SRRGYYGVWQEFE---KQYPDANVLLVTVTDEESRRIEQQSDEQTKAEIMQVLRKMFPGK 408
Query: 261 ISADQSKAKIVKYHVVKTPRSVYKTIP---NCEPCRPLQRSPVEGFYLAGDYTKQKYLAS 317
D + + ++ + + + P N L R+PV Y G++T + Y
Sbjct: 409 DVPDATDILVPRWWSDRFYKGTFSNWPVGVNRYEYDQL-RAPVGRVYFTGEHTSEHYNGY 467
Query: 318 MEGAVLSGKLCAQAIV 333
+ GA LSG A+ ++
Sbjct: 468 VHGAYLSGIDSAEILI 483
>sp|Q9XWP6|LSD1_CAEEL Probable lysine-specific histone demethylase 1 OS=Caenorhabditis
elegans GN=spr-5 PE=1 SV=1
Length = 770
Score = 33.1 bits (74), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 50/129 (38%), Gaps = 18/129 (13%)
Query: 222 PNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYH------- 274
P +L E + D II M L K F + A I ++H
Sbjct: 558 PGSKVLCTYIVGEEAMLELPDDVIIQNAMINLQKAFGNNCPRAPISAHITRWHDDELAFG 617
Query: 275 -----VVKTPRSVYKTIPNCEPCRPLQRSP-VEGFYLAGDYTKQKYLASMEGAVLSGKLC 328
++T + + + PL+ S + Y AG++T Y ++++GA +SG
Sbjct: 618 SGAFMSLRTETTSFDDV-----MEPLKTSDGMSRVYFAGEHTCSSYTSTIQGAWMSGARA 672
Query: 329 AQAIVQDYV 337
A I D++
Sbjct: 673 AADISNDHI 681
>sp|P22871|CRTI_ESCVU Phytoene desaturase (lycopene-forming) OS=Escherichia vulneris
GN=crtI PE=3 SV=1
Length = 492
Score = 32.7 bits (73), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 102 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDA 145
+V+ LGGE+ LN+RV+++ + D+ V L +G + D DA
Sbjct: 227 MVKLFTDLGGEIELNARVEELVVADN-RVSQVRLADGRIFDTDA 269
>sp|P21900|PURA_DICDI Adenylosuccinate synthetase OS=Dictyostelium discoideum GN=purA
PE=1 SV=1
Length = 427
Score = 32.3 bits (72), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Query: 158 QLPENWKEMAYFKRLEKLVGVPVINIHIWFDRK 190
QLP K Y KR+E+LVGVP++ I + +RK
Sbjct: 388 QLPIQAKN--YIKRIEELVGVPIVYIGVGVERK 418
>sp|B1JQ63|CAPP_YERPY Phosphoenolpyruvate carboxylase OS=Yersinia pseudotuberculosis
serotype O:3 (strain YPIII) GN=ppc PE=3 SV=1
Length = 878
Score = 32.3 bits (72), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 212 MSLTCKE--YYNPNQSMLELVFAPAEEWIS-CSDSEIIDATMKELAKLFPDEISAD 264
++ C++ +++ MLE+VFA A+ W++ D ++D ++ L + D+++AD
Sbjct: 749 LATMCRDWPFFSTRIGMLEMVFAKADLWLAEYYDQRLVDKSLWPLGQQLRDQLAAD 804
>sp|Q66G74|CAPP_YERPS Phosphoenolpyruvate carboxylase OS=Yersinia pseudotuberculosis
serotype I (strain IP32953) GN=ppc PE=3 SV=1
Length = 878
Score = 32.3 bits (72), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 212 MSLTCKE--YYNPNQSMLELVFAPAEEWIS-CSDSEIIDATMKELAKLFPDEISAD 264
++ C++ +++ MLE+VFA A+ W++ D ++D ++ L + D+++AD
Sbjct: 749 LATMCRDWPFFSTRIGMLEMVFAKADLWLAEYYDQRLVDKSLWPLGQQLRDQLAAD 804
>sp|B2JZD9|CAPP_YERPB Phosphoenolpyruvate carboxylase OS=Yersinia pseudotuberculosis
serotype IB (strain PB1/+) GN=ppc PE=3 SV=1
Length = 878
Score = 32.3 bits (72), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 212 MSLTCKE--YYNPNQSMLELVFAPAEEWIS-CSDSEIIDATMKELAKLFPDEISAD 264
++ C++ +++ MLE+VFA A+ W++ D ++D ++ L + D+++AD
Sbjct: 749 LATMCRDWPFFSTRIGMLEMVFAKADLWLAEYYDQRLVDKSLWPLGQQLRDQLAAD 804
>sp|A7FCZ7|CAPP_YERP3 Phosphoenolpyruvate carboxylase OS=Yersinia pseudotuberculosis
serotype O:1b (strain IP 31758) GN=ppc PE=3 SV=1
Length = 878
Score = 32.3 bits (72), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 212 MSLTCKE--YYNPNQSMLELVFAPAEEWIS-CSDSEIIDATMKELAKLFPDEISAD 264
++ C++ +++ MLE+VFA A+ W++ D ++D ++ L + D+++AD
Sbjct: 749 LATMCRDWPFFSTRIGMLEMVFAKADLWLAEYYDQRLVDKSLWPLGQQLRDQLAAD 804
>sp|A4TRH7|CAPP_YERPP Phosphoenolpyruvate carboxylase OS=Yersinia pestis (strain
Pestoides F) GN=ppc PE=3 SV=1
Length = 878
Score = 32.3 bits (72), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 212 MSLTCKE--YYNPNQSMLELVFAPAEEWIS-CSDSEIIDATMKELAKLFPDEISAD 264
++ C++ +++ MLE+VFA A+ W++ D ++D ++ L + D+++AD
Sbjct: 749 LATMCRDWPFFSTRIGMLEMVFAKADLWLAEYYDQRLVDKSLWPLGQQLRDQLAAD 804
>sp|Q1CNQ7|CAPP_YERPN Phosphoenolpyruvate carboxylase OS=Yersinia pestis bv. Antiqua
(strain Nepal516) GN=ppc PE=3 SV=1
Length = 878
Score = 32.3 bits (72), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 212 MSLTCKE--YYNPNQSMLELVFAPAEEWIS-CSDSEIIDATMKELAKLFPDEISAD 264
++ C++ +++ MLE+VFA A+ W++ D ++D ++ L + D+++AD
Sbjct: 749 LATMCRDWPFFSTRIGMLEMVFAKADLWLAEYYDQRLVDKSLWPLGQQLRDQLAAD 804
>sp|Q8ZA84|CAPP_YERPE Phosphoenolpyruvate carboxylase OS=Yersinia pestis GN=ppc PE=3 SV=1
Length = 878
Score = 32.3 bits (72), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 212 MSLTCKE--YYNPNQSMLELVFAPAEEWIS-CSDSEIIDATMKELAKLFPDEISAD 264
++ C++ +++ MLE+VFA A+ W++ D ++D ++ L + D+++AD
Sbjct: 749 LATMCRDWPFFSTRIGMLEMVFAKADLWLAEYYDQRLVDKSLWPLGQQLRDQLAAD 804
>sp|Q1CBV8|CAPP_YERPA Phosphoenolpyruvate carboxylase OS=Yersinia pestis bv. Antiqua
(strain Antiqua) GN=ppc PE=3 SV=1
Length = 878
Score = 32.3 bits (72), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 212 MSLTCKE--YYNPNQSMLELVFAPAEEWIS-CSDSEIIDATMKELAKLFPDEISAD 264
++ C++ +++ MLE+VFA A+ W++ D ++D ++ L + D+++AD
Sbjct: 749 LATMCRDWPFFSTRIGMLEMVFAKADLWLAEYYDQRLVDKSLWPLGQQLRDQLAAD 804
>sp|C6DI86|CAPP_PECCP Phosphoenolpyruvate carboxylase OS=Pectobacterium carotovorum
subsp. carotovorum (strain PC1) GN=ppc PE=3 SV=1
Length = 879
Score = 32.0 bits (71), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 216 CKE--YYNPNQSMLELVFAPAEEWIS-CSDSEIIDATMKELAKLFPDEISAD 264
C++ +++ MLE+VFA A+ W++ D ++D + L K D+++AD
Sbjct: 754 CRDWPFFSTRIGMLEMVFAKADLWLAEYYDQRLVDEKLWPLGKQLRDQLAAD 805
>sp|Q05627|Y202_CLOB8 Uncharacterized protein Cbei_0202 OS=Clostridium beijerinckii
(strain ATCC 51743 / NCIMB 8052) GN=Cbei_0202 PE=4 SV=2
Length = 533
Score = 32.0 bits (71), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 102 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFA 149
I E I+ LGGEV NS+++KI DG +++ ++ NG I +A V A
Sbjct: 213 IREEIKRLGGEVNFNSKLEKITYK-DGKLES-IVVNGKNITCEALVLA 258
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 133,764,757
Number of Sequences: 539616
Number of extensions: 5624609
Number of successful extensions: 14036
Number of sequences better than 100.0: 48
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 13967
Number of HSP's gapped (non-prelim): 53
length of query: 354
length of database: 191,569,459
effective HSP length: 118
effective length of query: 236
effective length of database: 127,894,771
effective search space: 30183165956
effective search space used: 30183165956
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)