Query 018523
Match_columns 354
No_of_seqs 146 out of 1668
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 16:35:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018523.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018523hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ka7_A Oxidoreductase; structu 100.0 2.7E-31 9.3E-36 250.2 31.8 308 2-334 113-425 (425)
2 1s3e_A Amine oxidase [flavin-c 100.0 4.7E-29 1.6E-33 240.9 22.5 293 28-338 143-456 (520)
3 3nrn_A Uncharacterized protein 100.0 1.7E-27 5.7E-32 224.2 30.0 301 2-332 103-403 (421)
4 2vvm_A Monoamine oxidase N; FA 100.0 1.4E-28 4.8E-33 236.3 18.1 293 26-338 181-487 (495)
5 2yg5_A Putrescine oxidase; oxi 100.0 1.1E-28 3.6E-33 234.5 17.0 290 27-337 142-452 (453)
6 2ivd_A PPO, PPOX, protoporphyr 100.0 1.1E-27 3.7E-32 229.0 23.0 310 2-338 126-475 (478)
7 3i6d_A Protoporphyrinogen oxid 100.0 3.5E-28 1.2E-32 231.7 16.0 290 26-336 145-468 (470)
8 3lov_A Protoporphyrinogen oxid 100.0 7.9E-28 2.7E-32 229.9 15.1 292 27-342 144-471 (475)
9 3nks_A Protoporphyrinogen oxid 99.9 1.6E-27 5.6E-32 227.7 16.8 291 27-335 140-473 (477)
10 1sez_A Protoporphyrinogen oxid 99.9 1.1E-27 3.9E-32 230.4 14.8 314 2-338 122-495 (504)
11 4dgk_A Phytoene dehydrogenase; 99.9 8.9E-26 3E-30 217.0 24.6 289 31-337 164-492 (501)
12 1b37_A Protein (polyamine oxid 99.9 1.1E-24 3.7E-29 207.9 16.4 297 27-337 134-459 (472)
13 4dsg_A UDP-galactopyranose mut 99.9 1E-24 3.5E-29 208.2 11.6 311 2-333 112-452 (484)
14 4gde_A UDP-galactopyranose mut 99.9 2.7E-23 9.1E-28 200.2 15.5 292 26-335 138-478 (513)
15 3k7m_X 6-hydroxy-L-nicotine ox 99.9 1.1E-21 3.6E-26 185.0 25.7 273 26-335 137-425 (431)
16 3qj4_A Renalase; FAD/NAD(P)-bi 99.9 3.2E-22 1.1E-26 182.9 20.5 227 88-335 105-341 (342)
17 2iid_A L-amino-acid oxidase; f 99.9 2.7E-22 9.4E-27 192.6 20.8 290 26-338 178-486 (498)
18 2jae_A L-amino acid oxidase; o 99.9 2.3E-22 7.9E-27 192.7 15.7 236 86-339 230-488 (489)
19 2z3y_A Lysine-specific histone 99.9 1.3E-21 4.3E-26 193.6 13.1 228 87-337 393-659 (662)
20 2xag_A Lysine-specific histone 99.9 3E-21 1E-25 193.7 15.1 229 87-338 564-831 (852)
21 1rsg_A FMS1 protein; FAD bindi 99.8 9.4E-21 3.2E-25 182.6 14.6 295 28-338 136-509 (516)
22 4gut_A Lysine-specific histone 99.8 1.6E-20 5.6E-25 187.2 14.7 227 86-334 525-775 (776)
23 3ayj_A Pro-enzyme of L-phenyla 99.8 2.8E-21 9.7E-26 189.1 7.2 306 26-341 279-684 (721)
24 1yvv_A Amine oxidase, flavin-c 99.7 4E-16 1.4E-20 141.7 20.1 224 91-341 106-332 (336)
25 2b9w_A Putative aminooxidase; 99.7 9.6E-17 3.3E-21 150.7 14.0 274 28-333 140-423 (424)
26 3p1w_A Rabgdi protein; GDI RAB 99.5 9.5E-13 3.3E-17 123.9 15.7 149 1-153 155-313 (475)
27 2bcg_G Secretory pathway GDP d 99.5 3.5E-11 1.2E-15 113.7 26.0 250 28-333 173-438 (453)
28 1vg0_A RAB proteins geranylger 99.4 3.6E-11 1.2E-15 116.5 24.8 172 1-192 283-461 (650)
29 1d5t_A Guanine nucleotide diss 99.4 4E-11 1.4E-15 112.7 24.5 251 27-333 164-427 (433)
30 1v0j_A UDP-galactopyranose mut 99.4 3.6E-15 1.2E-19 138.8 -6.4 145 28-201 136-284 (399)
31 2bi7_A UDP-galactopyranose mut 99.3 3.5E-13 1.2E-17 124.6 4.0 127 28-188 130-260 (384)
32 1i8t_A UDP-galactopyranose mut 99.3 1E-12 3.4E-17 120.9 6.3 143 27-201 125-270 (367)
33 3hdq_A UDP-galactopyranose mut 99.2 6.3E-11 2.2E-15 109.3 9.2 233 25-335 151-390 (397)
34 2e1m_C L-glutamate oxidase; L- 99.1 2E-11 7E-16 100.2 1.4 130 197-337 12-153 (181)
35 3dje_A Fructosyl amine: oxygen 98.1 4.9E-05 1.7E-09 71.0 15.1 58 96-154 161-221 (438)
36 2e1m_A L-glutamate oxidase; L- 98.0 1.2E-05 4.3E-10 73.3 8.5 112 26-150 257-369 (376)
37 2gag_B Heterotetrameric sarcos 98.0 0.00036 1.2E-08 64.2 17.6 199 97-336 175-376 (405)
38 2e1m_B L-glutamate oxidase; L- 97.9 9.4E-06 3.2E-10 62.0 5.0 105 139-260 4-111 (130)
39 1y56_B Sarcosine oxidase; dehy 97.8 0.0021 7.3E-08 58.5 19.9 202 96-336 149-356 (382)
40 3dme_A Conserved exported prot 97.8 0.0005 1.7E-08 62.1 15.5 58 96-154 150-209 (369)
41 1ryi_A Glycine oxidase; flavop 97.7 0.0015 5.2E-08 59.4 17.3 197 96-337 164-364 (382)
42 3kkj_A Amine oxidase, flavin-c 97.6 0.005 1.7E-07 52.5 18.4 88 239-339 243-330 (336)
43 3ps9_A TRNA 5-methylaminomethy 97.5 0.011 3.7E-07 58.3 20.4 57 96-154 417-473 (676)
44 3atr_A Conserved archaeal prot 97.4 0.0041 1.4E-07 58.3 16.0 62 97-159 101-168 (453)
45 3axb_A Putative oxidoreductase 97.4 0.0022 7.4E-08 59.9 13.3 57 97-154 182-254 (448)
46 3pvc_A TRNA 5-methylaminomethy 97.4 0.011 3.9E-07 58.4 18.9 56 96-153 412-468 (689)
47 2gf3_A MSOX, monomeric sarcosi 97.3 0.0081 2.8E-07 54.7 16.4 56 96-154 150-205 (389)
48 3cgv_A Geranylgeranyl reductas 97.3 0.012 4E-07 53.7 17.0 57 97-154 103-162 (397)
49 2oln_A NIKD protein; flavoprot 97.2 0.043 1.5E-06 50.1 19.5 54 97-153 154-207 (397)
50 2gmh_A Electron transfer flavo 97.2 0.018 6.3E-07 55.7 17.5 58 97-154 145-217 (584)
51 2qa2_A CABE, polyketide oxygen 96.9 0.065 2.2E-06 50.7 18.2 61 97-159 108-172 (499)
52 3oz2_A Digeranylgeranylglycero 96.8 0.034 1.2E-06 50.4 15.3 57 97-154 103-162 (397)
53 3ihg_A RDME; flavoenzyme, anth 96.8 0.057 1.9E-06 51.6 16.9 63 96-159 120-189 (535)
54 2qa1_A PGAE, polyketide oxygen 96.7 0.077 2.6E-06 50.2 17.1 61 97-159 107-171 (500)
55 3lxd_A FAD-dependent pyridine 96.6 0.0058 2E-07 56.4 8.2 56 96-152 194-249 (415)
56 3nyc_A D-arginine dehydrogenas 96.6 0.0027 9.1E-08 57.7 5.9 56 96-154 154-209 (381)
57 3rp8_A Flavoprotein monooxygen 96.6 0.013 4.5E-07 53.8 10.6 53 97-153 128-180 (407)
58 3nlc_A Uncharacterized protein 96.5 0.0053 1.8E-07 58.8 7.6 58 96-154 220-277 (549)
59 3fg2_P Putative rubredoxin red 96.4 0.0061 2.1E-07 56.1 7.5 56 96-152 184-239 (404)
60 2i0z_A NAD(FAD)-utilizing dehy 96.4 0.0065 2.2E-07 56.8 7.6 58 96-154 134-191 (447)
61 4at0_A 3-ketosteroid-delta4-5a 96.3 0.0071 2.4E-07 57.5 7.4 57 97-153 203-263 (510)
62 1y0p_A Fumarate reductase flav 96.2 0.011 3.9E-07 57.0 8.3 57 96-152 255-315 (571)
63 3fmw_A Oxygenase; mithramycin, 96.2 0.038 1.3E-06 53.2 11.6 61 97-159 149-213 (570)
64 1d4d_A Flavocytochrome C fumar 96.0 0.017 5.7E-07 55.8 8.1 57 96-152 255-315 (572)
65 1qo8_A Flavocytochrome C3 fuma 96.0 0.014 4.7E-07 56.4 7.6 58 96-153 250-311 (566)
66 2dkh_A 3-hydroxybenzoate hydro 95.9 0.45 1.5E-05 46.4 18.0 63 97-160 142-218 (639)
67 2uzz_A N-methyl-L-tryptophan o 95.9 0.018 6.1E-07 52.0 7.4 55 97-154 150-204 (372)
68 3da1_A Glycerol-3-phosphate de 95.7 0.014 4.7E-07 56.3 6.4 58 96-154 170-232 (561)
69 3v76_A Flavoprotein; structura 95.7 0.015 5.2E-07 53.8 6.3 56 96-154 132-187 (417)
70 1q1r_A Putidaredoxin reductase 95.7 0.028 9.6E-07 52.1 8.1 56 97-152 192-248 (431)
71 1mo9_A ORF3; nucleotide bindin 95.6 0.024 8.3E-07 54.0 7.6 56 97-152 256-314 (523)
72 2e4g_A Tryptophan halogenase; 95.6 0.029 9.8E-07 53.9 8.1 58 97-155 195-253 (550)
73 1pj5_A N,N-dimethylglycine oxi 95.6 0.018 6.1E-07 58.3 6.9 56 97-154 152-207 (830)
74 1fec_A Trypanothione reductase 95.6 0.027 9.2E-07 53.2 7.8 55 97-152 232-286 (490)
75 3ef6_A Toluene 1,2-dioxygenase 95.6 0.02 6.9E-07 52.7 6.7 55 97-153 186-240 (410)
76 2wpf_A Trypanothione reductase 95.6 0.031 1.1E-06 52.9 8.1 55 97-152 236-290 (495)
77 2hqm_A GR, grase, glutathione 95.6 0.026 8.9E-07 53.1 7.5 56 97-152 227-283 (479)
78 2weu_A Tryptophan 5-halogenase 95.5 0.034 1.2E-06 52.7 8.2 58 97-155 174-231 (511)
79 3iwa_A FAD-dependent pyridine 95.5 0.032 1.1E-06 52.4 7.8 55 96-152 202-256 (472)
80 2ywl_A Thioredoxin reductase r 95.4 0.032 1.1E-06 44.7 6.4 54 96-153 56-109 (180)
81 1ges_A Glutathione reductase; 95.4 0.035 1.2E-06 51.8 7.6 55 97-152 209-263 (450)
82 3nix_A Flavoprotein/dehydrogen 95.3 0.028 9.6E-07 51.7 6.7 63 97-159 107-172 (421)
83 2cul_A Glucose-inhibited divis 95.3 0.03 1E-06 47.1 6.3 55 97-153 69-124 (232)
84 3o0h_A Glutathione reductase; 95.2 0.039 1.3E-06 52.0 7.5 55 97-153 233-287 (484)
85 2v3a_A Rubredoxin reductase; a 95.2 0.036 1.2E-06 50.4 7.1 54 97-152 188-241 (384)
86 4dna_A Probable glutathione re 95.2 0.039 1.3E-06 51.7 7.4 54 97-152 212-266 (463)
87 2wdq_A Succinate dehydrogenase 95.2 0.048 1.7E-06 52.8 8.0 58 96-153 143-205 (588)
88 1xdi_A RV3303C-LPDA; reductase 95.1 0.045 1.5E-06 51.8 7.7 55 97-153 224-278 (499)
89 2rgh_A Alpha-glycerophosphate 95.1 0.036 1.2E-06 53.4 7.1 57 97-154 189-250 (571)
90 1trb_A Thioredoxin reductase; 95.0 0.064 2.2E-06 47.1 8.0 55 97-152 185-245 (320)
91 1onf_A GR, grase, glutathione 95.0 0.058 2E-06 51.1 7.9 55 97-152 218-273 (500)
92 2cdu_A NADPH oxidase; flavoenz 94.9 0.044 1.5E-06 51.1 6.8 56 96-153 191-246 (452)
93 2aqj_A Tryptophan halogenase, 94.9 0.063 2.2E-06 51.3 8.0 59 96-155 165-223 (538)
94 1m6i_A Programmed cell death p 94.8 0.05 1.7E-06 51.4 6.9 54 97-152 227-280 (493)
95 3oc4_A Oxidoreductase, pyridin 94.8 0.063 2.2E-06 50.0 7.5 55 96-153 189-243 (452)
96 2x3n_A Probable FAD-dependent 94.7 0.049 1.7E-06 49.7 6.4 62 97-159 108-172 (399)
97 2gqf_A Hypothetical protein HI 94.7 0.06 2.1E-06 49.4 7.0 57 96-154 109-168 (401)
98 2yqu_A 2-oxoglutarate dehydrog 94.6 0.059 2E-06 50.3 6.9 55 97-153 209-263 (455)
99 2qcu_A Aerobic glycerol-3-phos 94.5 0.076 2.6E-06 50.2 7.4 57 96-154 149-210 (501)
100 2pyx_A Tryptophan halogenase; 94.5 0.1 3.6E-06 49.6 8.4 57 97-154 176-233 (526)
101 1k0i_A P-hydroxybenzoate hydro 94.2 0.11 3.8E-06 47.2 7.6 63 97-160 104-170 (394)
102 2r9z_A Glutathione amide reduc 94.2 0.094 3.2E-06 49.1 7.2 54 97-152 208-262 (463)
103 3dgh_A TRXR-1, thioredoxin red 94.0 0.11 3.8E-06 48.8 7.3 55 97-152 228-287 (483)
104 3ab1_A Ferredoxin--NADP reduct 93.9 0.14 4.7E-06 46.0 7.4 56 97-153 75-130 (360)
105 3itj_A Thioredoxin reductase 1 93.8 0.13 4.6E-06 45.3 7.3 53 99-152 211-269 (338)
106 2zxi_A TRNA uridine 5-carboxym 93.8 0.13 4.3E-06 49.9 7.3 56 97-154 124-180 (637)
107 3c4n_A Uncharacterized protein 93.7 0.036 1.2E-06 50.9 3.3 55 97-154 173-236 (405)
108 3g3e_A D-amino-acid oxidase; F 93.7 0.34 1.2E-05 43.2 9.7 187 96-338 142-336 (351)
109 2bs2_A Quinol-fumarate reducta 93.6 0.14 4.6E-06 50.3 7.4 58 96-154 158-220 (660)
110 2gqw_A Ferredoxin reductase; f 93.6 0.16 5.4E-06 46.6 7.5 50 97-152 188-237 (408)
111 3ntd_A FAD-dependent pyridine 93.6 0.15 5.2E-06 48.8 7.6 55 97-152 193-265 (565)
112 3alj_A 2-methyl-3-hydroxypyrid 93.5 0.15 5.2E-06 46.1 7.2 57 97-158 108-165 (379)
113 2h88_A Succinate dehydrogenase 93.5 0.11 3.9E-06 50.4 6.5 57 97-154 156-217 (621)
114 1rp0_A ARA6, thiazole biosynth 93.4 0.16 5.3E-06 44.1 6.8 56 97-153 120-190 (284)
115 1n4w_A CHOD, cholesterol oxida 93.4 0.11 3.6E-06 49.3 6.1 61 97-157 222-291 (504)
116 3e1t_A Halogenase; flavoprotei 93.4 0.15 5.2E-06 48.3 7.2 62 97-159 112-178 (512)
117 3ces_A MNMG, tRNA uridine 5-ca 93.4 0.14 4.9E-06 49.7 6.9 57 97-155 125-182 (651)
118 1zmd_A Dihydrolipoyl dehydroge 93.4 0.19 6.5E-06 47.1 7.7 56 97-153 221-281 (474)
119 3h8l_A NADH oxidase; membrane 93.2 0.13 4.5E-06 47.1 6.2 51 96-152 218-268 (409)
120 3cty_A Thioredoxin reductase; 93.2 0.23 8E-06 43.5 7.6 52 100-152 194-250 (319)
121 3lad_A Dihydrolipoamide dehydr 93.1 0.23 7.9E-06 46.5 7.9 55 97-153 222-279 (476)
122 3gwf_A Cyclohexanone monooxyge 93.1 0.19 6.5E-06 48.0 7.3 57 97-153 88-146 (540)
123 1chu_A Protein (L-aspartate ox 93.0 0.097 3.3E-06 50.0 5.3 59 96-154 138-208 (540)
124 1v59_A Dihydrolipoamide dehydr 93.0 0.2 7E-06 46.9 7.4 56 97-152 225-285 (478)
125 1y56_A Hypothetical protein PH 93.0 0.24 8.4E-06 46.6 7.9 62 85-153 251-312 (493)
126 4ap3_A Steroid monooxygenase; 93.0 0.19 6.6E-06 48.1 7.2 57 97-153 100-158 (549)
127 2bc0_A NADH oxidase; flavoprot 93.0 0.17 5.9E-06 47.6 6.8 53 97-152 237-289 (490)
128 4a9w_A Monooxygenase; baeyer-v 92.9 0.17 5.7E-06 44.9 6.4 57 97-155 77-133 (357)
129 2qae_A Lipoamide, dihydrolipoy 92.9 0.26 8.9E-06 46.0 7.9 55 97-153 216-275 (468)
130 3ics_A Coenzyme A-disulfide re 92.9 0.14 4.9E-06 49.4 6.2 53 96-152 228-280 (588)
131 3i3l_A Alkylhalidase CMLS; fla 92.8 0.21 7.1E-06 48.3 7.2 57 97-154 129-188 (591)
132 3lzw_A Ferredoxin--NADP reduct 92.8 0.18 6.2E-06 44.3 6.3 56 96-153 67-122 (332)
133 2eq6_A Pyruvate dehydrogenase 92.7 0.23 7.8E-06 46.4 7.2 54 97-152 211-269 (464)
134 1coy_A Cholesterol oxidase; ox 92.5 0.16 5.4E-06 48.2 5.8 61 97-157 227-296 (507)
135 2a8x_A Dihydrolipoyl dehydroge 92.5 0.31 1.1E-05 45.4 7.8 54 97-152 213-269 (464)
136 2zbw_A Thioredoxin reductase; 92.4 0.36 1.2E-05 42.5 7.9 53 98-152 193-250 (335)
137 3ab1_A Ferredoxin--NADP reduct 92.4 0.18 6.3E-06 45.1 5.9 54 98-152 204-261 (360)
138 3r9u_A Thioredoxin reductase; 92.4 0.21 7E-06 43.5 6.1 49 103-152 190-242 (315)
139 3klj_A NAD(FAD)-dependent dehy 92.2 0.14 4.9E-06 46.6 5.0 49 100-152 66-114 (385)
140 3d1c_A Flavin-containing putat 92.1 0.26 8.9E-06 44.1 6.6 55 97-154 89-143 (369)
141 3dk9_A Grase, GR, glutathione 92.1 0.32 1.1E-05 45.5 7.4 55 97-152 229-291 (478)
142 1kf6_A Fumarate reductase flav 92.0 0.22 7.7E-06 48.2 6.4 57 97-154 135-197 (602)
143 1ebd_A E3BD, dihydrolipoamide 92.0 0.26 9.1E-06 45.8 6.7 55 97-153 212-269 (455)
144 2zbw_A Thioredoxin reductase; 92.0 0.24 8.3E-06 43.6 6.1 55 97-153 66-120 (335)
145 2vou_A 2,6-dihydroxypyridine h 91.9 0.31 1.1E-05 44.3 6.9 44 109-154 110-153 (397)
146 1ojt_A Surface protein; redox- 91.7 0.16 5.4E-06 47.8 4.7 55 97-153 227-285 (482)
147 3dgz_A Thioredoxin reductase 2 91.6 0.45 1.6E-05 44.7 7.9 55 97-152 226-285 (488)
148 1nhp_A NADH peroxidase; oxidor 91.6 0.29 1E-05 45.4 6.5 53 97-152 192-244 (447)
149 1dxl_A Dihydrolipoamide dehydr 91.6 0.34 1.2E-05 45.2 6.9 55 97-153 219-278 (470)
150 4g6h_A Rotenone-insensitive NA 91.5 0.31 1.1E-05 46.1 6.6 56 95-152 271-330 (502)
151 1fl2_A Alkyl hydroperoxide red 91.4 0.37 1.3E-05 41.9 6.6 56 97-153 57-114 (310)
152 4hb9_A Similarities with proba 91.3 0.37 1.3E-05 43.6 6.8 45 109-154 122-166 (412)
153 3urh_A Dihydrolipoyl dehydroge 91.3 0.39 1.3E-05 45.1 7.0 54 97-152 240-298 (491)
154 4b1b_A TRXR, thioredoxin reduc 91.2 0.42 1.4E-05 45.6 7.2 55 96-152 263-317 (542)
155 1zk7_A HGII, reductase, mercur 91.2 0.44 1.5E-05 44.4 7.3 54 97-153 217-270 (467)
156 1jnr_A Adenylylsulfate reducta 91.2 0.44 1.5E-05 46.5 7.5 57 97-153 152-217 (643)
157 1c0p_A D-amino acid oxidase; a 91.2 7.3 0.00025 34.4 15.2 44 96-154 142-185 (363)
158 3uox_A Otemo; baeyer-villiger 91.0 0.31 1.1E-05 46.6 6.1 57 97-153 88-146 (545)
159 3cgb_A Pyridine nucleotide-dis 91.0 0.62 2.1E-05 43.6 8.1 55 96-153 227-281 (480)
160 4eqs_A Coenzyme A disulfide re 90.9 0.45 1.5E-05 44.0 7.0 51 96-152 188-238 (437)
161 1fl2_A Alkyl hydroperoxide red 90.9 0.58 2E-05 40.6 7.4 52 100-152 183-240 (310)
162 3fbs_A Oxidoreductase; structu 90.7 0.6 2E-05 40.1 7.2 60 86-152 165-224 (297)
163 3cp8_A TRNA uridine 5-carboxym 90.4 0.38 1.3E-05 46.7 6.1 55 97-153 118-173 (641)
164 3f8d_A Thioredoxin reductase ( 90.2 0.5 1.7E-05 41.1 6.4 54 97-153 71-124 (323)
165 2bry_A NEDD9 interacting prote 90.2 0.29 9.9E-06 46.2 5.1 59 97-155 167-231 (497)
166 2xdo_A TETX2 protein; tetracyc 90.1 0.27 9.3E-06 44.7 4.7 48 110-159 140-188 (398)
167 3f8d_A Thioredoxin reductase ( 90.1 0.74 2.5E-05 40.0 7.4 50 101-152 194-249 (323)
168 1w4x_A Phenylacetone monooxyge 89.9 0.6 2.1E-05 44.5 7.1 57 97-153 95-153 (542)
169 3h28_A Sulfide-quinone reducta 89.8 0.5 1.7E-05 43.5 6.3 50 97-152 201-254 (430)
170 2gv8_A Monooxygenase; FMO, FAD 89.7 0.35 1.2E-05 44.9 5.1 58 97-156 116-179 (447)
171 3lzw_A Ferredoxin--NADP reduct 89.6 0.54 1.8E-05 41.1 6.1 51 100-152 193-248 (332)
172 1pn0_A Phenol 2-monooxygenase; 89.4 12 0.00041 36.5 16.0 36 301-336 351-389 (665)
173 3gyx_A Adenylylsulfate reducta 89.4 0.54 1.8E-05 46.0 6.3 57 96-152 166-231 (662)
174 3vrd_B FCCB subunit, flavocyto 89.3 0.15 5.2E-06 46.5 2.3 44 107-152 213-256 (401)
175 3k30_A Histamine dehydrogenase 89.2 0.25 8.7E-06 48.7 4.0 51 98-152 569-622 (690)
176 2xve_A Flavin-containing monoo 89.1 0.78 2.7E-05 42.8 7.0 57 97-154 102-166 (464)
177 2e5v_A L-aspartate oxidase; ar 89.0 0.5 1.7E-05 44.2 5.7 57 96-154 119-176 (472)
178 2q0l_A TRXR, thioredoxin reduc 89.0 0.64 2.2E-05 40.4 6.1 53 97-152 60-112 (311)
179 3nlc_A Uncharacterized protein 89.0 1.2 4.3E-05 42.4 8.4 41 296-338 503-544 (549)
180 4gcm_A TRXR, thioredoxin reduc 88.9 0.57 1.9E-05 40.8 5.7 45 294-339 264-308 (312)
181 2q7v_A Thioredoxin reductase; 88.8 1.2 4.1E-05 39.0 7.7 51 100-152 191-247 (325)
182 3ic9_A Dihydrolipoamide dehydr 88.8 1 3.4E-05 42.3 7.6 54 97-153 216-273 (492)
183 2q0l_A TRXR, thioredoxin reduc 88.8 0.92 3.2E-05 39.3 7.0 52 100-152 182-239 (311)
184 3fpz_A Thiazole biosynthetic e 88.5 0.27 9.4E-06 43.4 3.4 42 296-337 279-325 (326)
185 1hyu_A AHPF, alkyl hydroperoxi 88.4 0.8 2.7E-05 43.4 6.7 56 97-153 268-325 (521)
186 3c96_A Flavin-containing monoo 88.1 0.9 3.1E-05 41.4 6.7 59 97-158 108-174 (410)
187 2gjc_A Thiazole biosynthetic e 88.1 1.4 4.7E-05 39.0 7.5 39 97-135 147-191 (326)
188 1xhc_A NADH oxidase /nitrite r 87.9 0.66 2.2E-05 41.8 5.5 49 97-152 184-232 (367)
189 1lvl_A Dihydrolipoamide dehydr 87.9 0.59 2E-05 43.5 5.4 52 97-152 213-266 (458)
190 1vdc_A NTR, NADPH dependent th 87.9 0.83 2.8E-05 40.1 6.1 53 97-153 71-123 (333)
191 3s5w_A L-ornithine 5-monooxyge 87.3 0.62 2.1E-05 43.2 5.1 55 98-152 129-190 (463)
192 2q7v_A Thioredoxin reductase; 87.3 1.4 4.7E-05 38.6 7.1 55 97-153 66-122 (325)
193 3jsk_A Cypbp37 protein; octame 87.1 1.5 5.1E-05 39.0 7.2 56 98-153 162-250 (344)
194 2jbv_A Choline oxidase; alcoho 86.8 0.7 2.4E-05 44.1 5.2 51 108-158 221-277 (546)
195 1vdc_A NTR, NADPH dependent th 86.5 1.6 5.6E-05 38.1 7.2 53 100-152 198-257 (333)
196 3s5w_A L-ornithine 5-monooxyge 86.4 1.3 4.5E-05 41.0 6.8 43 109-153 329-376 (463)
197 3fbs_A Oxidoreductase; structu 86.3 1 3.4E-05 38.6 5.6 41 296-338 253-293 (297)
198 3itj_A Thioredoxin reductase 1 85.6 1.7 5.7E-05 38.0 6.8 53 97-152 85-140 (338)
199 1kdg_A CDH, cellobiose dehydro 85.5 0.77 2.6E-05 43.8 4.8 56 102-158 201-265 (546)
200 2a87_A TRXR, TR, thioredoxin r 85.1 1.9 6.5E-05 37.8 7.0 50 297-347 277-326 (335)
201 3d1c_A Flavin-containing putat 84.9 0.94 3.2E-05 40.3 4.9 51 100-152 218-270 (369)
202 3sx6_A Sulfide-quinone reducta 84.3 1.8 6.3E-05 39.8 6.7 50 98-151 210-266 (437)
203 4fk1_A Putative thioredoxin re 84.0 1.8 6.1E-05 37.5 6.1 62 84-149 170-231 (304)
204 4fk1_A Putative thioredoxin re 83.8 2.3 8E-05 36.7 6.8 44 295-339 259-302 (304)
205 1trb_A Thioredoxin reductase; 83.5 2.5 8.5E-05 36.6 6.9 53 97-153 63-115 (320)
206 3hyw_A Sulfide-quinone reducta 83.3 0.78 2.7E-05 42.2 3.7 52 97-152 201-254 (430)
207 1q1r_A Putidaredoxin reductase 83.2 1.8 6.3E-05 39.7 6.2 45 104-152 68-112 (431)
208 2gag_A Heterotetrameric sarcos 83.0 2 6.9E-05 44.0 6.9 50 103-152 323-381 (965)
209 3hyw_A Sulfide-quinone reducta 82.6 0.45 1.5E-05 43.9 1.7 45 104-153 64-108 (430)
210 3ef6_A Toluene 1,2-dioxygenase 82.5 2 6.8E-05 39.2 6.1 45 105-153 66-110 (410)
211 1hyu_A AHPF, alkyl hydroperoxi 82.5 2.6 8.8E-05 39.9 7.0 51 100-151 394-450 (521)
212 1cjc_A Protein (adrenodoxin re 82.0 2.2 7.7E-05 39.6 6.3 44 109-152 270-331 (460)
213 2r0c_A REBC; flavin adenine di 81.8 2.5 8.5E-05 40.3 6.6 57 98-159 140-202 (549)
214 3pl8_A Pyranose 2-oxidase; sub 81.8 1.4 4.9E-05 42.7 5.0 48 109-156 273-326 (623)
215 4a9w_A Monooxygenase; baeyer-v 81.8 1.3 4.5E-05 38.9 4.5 42 296-338 310-353 (357)
216 2cul_A Glucose-inhibited divis 81.1 1.4 5E-05 36.5 4.2 36 298-336 196-231 (232)
217 4a5l_A Thioredoxin reductase; 80.9 1.8 6.2E-05 37.4 5.0 54 97-153 67-120 (314)
218 3kd9_A Coenzyme A disulfide re 80.9 2.4 8.3E-05 39.1 6.1 52 97-152 191-242 (449)
219 3r9u_A Thioredoxin reductase; 80.8 2.1 7.3E-05 36.8 5.4 42 295-337 271-312 (315)
220 1xhc_A NADH oxidase /nitrite r 80.7 1.3 4.6E-05 39.7 4.2 44 104-152 68-111 (367)
221 2a87_A TRXR, TR, thioredoxin r 80.7 2.2 7.6E-05 37.4 5.6 53 97-153 72-125 (335)
222 3qfa_A Thioredoxin reductase 1 80.4 3.6 0.00012 38.8 7.2 56 96-152 250-313 (519)
223 3qvp_A Glucose oxidase; oxidor 79.9 2.4 8.1E-05 40.8 5.7 51 108-158 239-297 (583)
224 3cty_A Thioredoxin reductase; 78.3 2.7 9.2E-05 36.5 5.2 53 97-153 73-125 (319)
225 1ju2_A HydroxynitrIle lyase; f 78.1 2.8 9.5E-05 39.8 5.6 52 107-158 205-265 (536)
226 3l8k_A Dihydrolipoyl dehydroge 77.7 2.5 8.6E-05 39.2 5.1 52 100-152 214-270 (466)
227 3lxd_A FAD-dependent pyridine 77.5 3.6 0.00012 37.5 6.0 47 102-152 71-117 (415)
228 2ywl_A Thioredoxin reductase r 77.3 3.4 0.00012 32.4 5.2 41 296-337 131-171 (180)
229 2x8g_A Thioredoxin glutathione 77.1 6.5 0.00022 37.7 8.0 57 97-153 327-394 (598)
230 2gqw_A Ferredoxin reductase; f 76.7 2.6 8.8E-05 38.4 4.8 42 107-152 70-111 (408)
231 1ps9_A 2,4-dienoyl-COA reducta 76.0 5.3 0.00018 39.0 7.1 50 99-153 576-627 (671)
232 3uox_A Otemo; baeyer-villiger 76.0 2.7 9.3E-05 40.0 4.9 47 102-155 344-392 (545)
233 2vdc_G Glutamate synthase [NAD 75.3 3.1 0.00011 38.6 4.9 41 296-338 405-445 (456)
234 3gwf_A Cyclohexanone monooxyge 74.1 2 6.9E-05 40.9 3.4 43 107-155 341-385 (540)
235 1gpe_A Protein (glucose oxidas 73.7 2.7 9.1E-05 40.5 4.2 51 108-158 243-301 (587)
236 3fim_B ARYL-alcohol oxidase; A 73.6 1.8 6.2E-05 41.4 3.0 51 108-158 220-280 (566)
237 3sx6_A Sulfide-quinone reducta 72.9 5.1 0.00017 36.7 5.8 47 102-153 65-111 (437)
238 3q9t_A Choline dehydrogenase a 71.9 3.5 0.00012 39.5 4.6 50 108-157 218-273 (577)
239 1m6i_A Programmed cell death p 71.6 2.6 8.9E-05 39.5 3.5 41 108-152 102-142 (493)
240 4b63_A L-ornithine N5 monooxyg 70.3 7.6 0.00026 36.4 6.5 56 97-152 146-212 (501)
241 1lqt_A FPRA; NADP+ derivative, 69.3 4.2 0.00014 37.7 4.3 42 109-152 265-324 (456)
242 1nhp_A NADH peroxidase; oxidor 69.2 5.8 0.0002 36.5 5.3 48 103-152 63-113 (447)
243 3fg2_P Putative rubredoxin red 68.5 8.2 0.00028 34.9 6.1 47 101-152 62-108 (404)
244 3cgb_A Pyridine nucleotide-dis 67.8 6.3 0.00021 36.7 5.3 48 103-152 99-150 (480)
245 3h8l_A NADH oxidase; membrane 67.8 6.1 0.00021 35.7 5.1 42 295-336 293-335 (409)
246 3vrd_B FCCB subunit, flavocyto 67.7 9.7 0.00033 34.2 6.4 40 298-337 284-324 (401)
247 2bc0_A NADH oxidase; flavoprot 67.4 5.8 0.0002 37.0 5.0 46 103-152 99-147 (490)
248 1gte_A Dihydropyrimidine dehyd 65.9 13 0.00046 38.2 7.7 50 102-152 376-440 (1025)
249 3oc4_A Oxidoreductase, pyridin 64.2 7.5 0.00026 35.7 5.0 48 103-152 65-113 (452)
250 3ics_A Coenzyme A-disulfide re 63.1 9.4 0.00032 36.5 5.6 51 100-152 97-150 (588)
251 2cdu_A NADPH oxidase; flavoenz 63.0 8.2 0.00028 35.5 5.0 48 103-152 65-115 (452)
252 3t37_A Probable dehydrogenase; 61.8 7 0.00024 36.7 4.4 49 109-158 224-275 (526)
253 2vdc_G Glutamate synthase [NAD 61.8 4 0.00014 37.8 2.6 48 103-152 309-376 (456)
254 1o94_A Tmadh, trimethylamine d 61.1 5.9 0.0002 39.1 3.9 49 100-152 575-644 (729)
255 1ebd_A E3BD, dihydrolipoamide 60.7 13 0.00043 34.2 5.8 37 296-334 296-332 (455)
256 3h28_A Sulfide-quinone reducta 60.2 11 0.00039 34.2 5.4 45 104-153 64-108 (430)
257 4ap3_A Steroid monooxygenase; 60.0 6 0.00021 37.6 3.5 42 107-155 354-397 (549)
258 3ntd_A FAD-dependent pyridine 59.9 9.8 0.00034 36.0 5.1 44 107-152 69-115 (565)
259 3kd9_A Coenzyme A disulfide re 59.2 7 0.00024 35.9 3.8 42 107-152 70-112 (449)
260 2a8x_A Dihydrolipoyl dehydroge 58.1 15 0.00053 33.7 6.0 38 295-334 296-333 (464)
261 4a5l_A Thioredoxin reductase; 57.6 23 0.0008 30.1 6.8 42 295-337 271-312 (314)
262 1v59_A Dihydrolipoamide dehydr 57.4 12 0.00042 34.5 5.2 38 295-334 312-349 (478)
263 2i0z_A NAD(FAD)-utilizing dehy 56.8 9.3 0.00032 35.1 4.2 38 298-335 402-442 (447)
264 3ic9_A Dihydrolipoamide dehydr 55.9 12 0.0004 35.0 4.8 38 295-334 300-337 (492)
265 4dna_A Probable glutathione re 55.3 12 0.00041 34.5 4.7 38 295-334 293-330 (463)
266 3l8k_A Dihydrolipoyl dehydroge 54.7 12 0.00041 34.5 4.6 38 295-334 295-332 (466)
267 3lad_A Dihydrolipoamide dehydr 53.5 14 0.00048 34.1 4.8 38 295-334 305-342 (476)
268 3dk9_A Grase, GR, glutathione 53.5 13 0.00044 34.4 4.6 39 295-335 318-356 (478)
269 3o0h_A Glutathione reductase; 52.0 14 0.00049 34.2 4.7 39 295-335 313-351 (484)
270 4eqs_A Coenzyme A disulfide re 51.8 25 0.00086 32.1 6.2 46 106-153 67-115 (437)
271 3urh_A Dihydrolipoyl dehydroge 51.6 12 0.00042 34.7 4.1 38 295-334 325-362 (491)
272 3iwa_A FAD-dependent pyridine 51.0 19 0.00063 33.3 5.3 43 108-152 78-123 (472)
273 3dgh_A TRXR-1, thioredoxin red 50.8 16 0.00053 33.9 4.7 39 295-334 313-351 (483)
274 3dgz_A Thioredoxin reductase 2 50.7 16 0.00055 33.9 4.8 39 295-334 313-351 (488)
275 1ges_A Glutathione reductase; 50.0 16 0.00056 33.4 4.7 38 295-334 290-327 (450)
276 1dxl_A Dihydrolipoamide dehydr 49.6 19 0.00064 33.2 5.1 37 296-334 305-341 (470)
277 2v3a_A Rubredoxin reductase; a 49.1 20 0.00067 32.0 5.0 42 106-152 70-111 (384)
278 2hqm_A GR, grase, glutathione 48.9 17 0.00057 33.7 4.6 37 296-334 310-346 (479)
279 1gte_A Dihydropyrimidine dehyd 48.6 17 0.00059 37.4 5.0 40 296-337 469-508 (1025)
280 3qfa_A Thioredoxin reductase 1 48.5 18 0.0006 34.0 4.7 39 295-334 341-379 (519)
281 1y56_A Hypothetical protein PH 47.7 16 0.00056 34.0 4.3 36 299-337 342-377 (493)
282 2gqf_A Hypothetical protein HI 47.2 10 0.00034 34.4 2.7 36 298-333 361-399 (401)
283 1fec_A Trypanothione reductase 47.0 19 0.00065 33.5 4.7 38 295-334 313-350 (490)
284 2wpf_A Trypanothione reductase 46.9 19 0.00065 33.5 4.7 38 295-334 317-354 (495)
285 1zmd_A Dihydrolipoyl dehydroge 46.6 16 0.00056 33.7 4.1 38 295-334 307-344 (474)
286 3klj_A NAD(FAD)-dependent dehy 46.4 15 0.0005 33.0 3.7 40 295-334 252-293 (385)
287 1w4x_A Phenylacetone monooxyge 45.8 17 0.00058 34.3 4.2 46 102-154 344-391 (542)
288 2r9z_A Glutathione amide reduc 45.7 21 0.00071 32.9 4.7 37 296-334 290-326 (463)
289 2gjc_A Thiazole biosynthetic e 45.2 17 0.00058 31.9 3.7 38 300-337 283-325 (326)
290 2qae_A Lipoamide, dihydrolipoy 45.1 18 0.00063 33.2 4.2 39 295-334 301-339 (468)
291 1ojt_A Surface protein; redox- 45.1 18 0.0006 33.6 4.1 38 295-334 311-348 (482)
292 1d4d_A Flavocytochrome C fumar 44.7 10 0.00034 36.2 2.4 38 298-335 525-568 (572)
293 2x8g_A Thioredoxin glutathione 44.2 24 0.00081 33.7 4.9 39 296-335 421-459 (598)
294 1xdi_A RV3303C-LPDA; reductase 44.0 19 0.00065 33.5 4.2 38 295-334 304-341 (499)
295 2eq6_A Pyruvate dehydrogenase 43.3 19 0.00066 33.1 4.1 37 296-334 297-333 (464)
296 1zk7_A HGII, reductase, mercur 42.3 21 0.00072 32.8 4.2 38 295-334 296-333 (467)
297 1mo9_A ORF3; nucleotide bindin 42.3 21 0.0007 33.6 4.1 38 295-334 340-377 (523)
298 2yqu_A 2-oxoglutarate dehydrog 41.9 27 0.00093 31.9 4.8 37 296-334 290-326 (455)
299 1jnr_A Adenylylsulfate reducta 41.1 25 0.00085 34.1 4.6 40 297-336 428-467 (643)
300 3v76_A Flavoprotein; structura 40.8 12 0.0004 34.2 2.1 33 299-331 381-416 (417)
301 3cp8_A TRNA uridine 5-carboxym 40.7 23 0.0008 34.3 4.2 39 295-336 372-411 (641)
302 1qo8_A Flavocytochrome C3 fuma 40.5 15 0.00052 34.9 2.9 39 297-335 518-562 (566)
303 2gag_A Heterotetrameric sarcos 40.1 25 0.00087 35.9 4.6 39 298-339 408-446 (965)
304 1chu_A Protein (L-aspartate ox 39.3 23 0.00079 33.5 3.9 40 297-336 364-410 (540)
305 1lvl_A Dihydrolipoamide dehydr 39.0 25 0.00086 32.3 4.1 37 296-334 293-329 (458)
306 1y0p_A Fumarate reductase flav 38.1 16 0.00053 34.8 2.6 39 297-335 523-567 (571)
307 3g5s_A Methylenetetrahydrofola 37.0 22 0.00076 32.4 3.2 34 299-335 327-360 (443)
308 4gcm_A TRXR, thioredoxin reduc 36.6 82 0.0028 26.7 6.9 51 98-152 64-114 (312)
309 4g6h_A Rotenone-insensitive NA 36.5 41 0.0014 31.4 5.1 43 294-336 357-400 (502)
310 3ces_A MNMG, tRNA uridine 5-ca 36.4 32 0.0011 33.3 4.4 34 299-335 383-416 (651)
311 1lqt_A FPRA; NADP+ derivative, 36.3 29 0.00099 31.9 4.0 40 298-338 349-388 (456)
312 4at0_A 3-ketosteroid-delta4-5a 35.4 21 0.00071 33.4 2.9 37 297-333 465-507 (510)
313 1cjc_A Protein (adrenodoxin re 35.2 24 0.00081 32.6 3.3 41 297-338 355-396 (460)
314 3jsk_A Cypbp37 protein; octame 34.8 24 0.00083 31.2 3.1 41 300-340 293-338 (344)
315 3k30_A Histamine dehydrogenase 34.8 14 0.00049 36.1 1.7 36 298-336 639-674 (690)
316 1kf6_A Fumarate reductase flav 32.8 43 0.0015 32.1 4.7 41 296-336 368-415 (602)
317 4b1b_A TRXR, thioredoxin reduc 32.0 43 0.0015 31.7 4.5 39 295-334 345-383 (542)
318 2zxi_A TRNA uridine 5-carboxym 31.8 38 0.0013 32.7 4.1 33 300-335 389-421 (637)
319 1rp0_A ARA6, thiazole biosynth 30.0 26 0.00091 29.7 2.5 38 300-337 233-275 (284)
320 1o94_A Tmadh, trimethylamine d 29.9 15 0.00051 36.2 1.0 37 297-336 663-699 (729)
321 1onf_A GR, grase, glutathione 29.8 49 0.0017 30.7 4.5 39 296-334 300-370 (500)
322 2bs2_A Quinol-fumarate reducta 28.8 55 0.0019 31.8 4.8 41 296-336 381-428 (660)
323 3c4a_A Probable tryptophan hyd 28.7 17 0.0006 32.3 1.1 46 98-157 100-145 (381)
324 3gyx_A Adenylylsulfate reducta 27.6 54 0.0019 31.8 4.4 42 295-336 447-488 (662)
325 2xve_A Flavin-containing monoo 26.8 51 0.0017 30.3 4.0 22 132-153 254-275 (464)
326 2gv8_A Monooxygenase; FMO, FAD 26.8 44 0.0015 30.4 3.6 36 114-153 255-291 (447)
327 2h88_A Succinate dehydrogenase 23.8 32 0.0011 33.1 2.0 40 297-336 386-432 (621)
328 3nix_A Flavoprotein/dehydrogen 21.1 89 0.0031 27.7 4.4 37 301-337 288-327 (421)
329 2wdq_A Succinate dehydrogenase 20.5 43 0.0015 31.9 2.2 38 299-336 379-423 (588)
No 1
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=100.00 E-value=2.7e-31 Score=250.21 Aligned_cols=308 Identities=18% Similarity=0.253 Sum_probs=232.4
Q ss_pred CChHHHHHHhhhhhHHHhccccccccccCCCHHHHHHHcCCChHHHHHHHHHHHhhhccCCcccccHHHHHHHHHHHhhc
Q 018523 2 LTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQE 81 (354)
Q Consensus 2 ls~~~k~~~~~~~~~~~~~~~~~~~~~d~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~~~~~~~~ 81 (354)
+++.+|.+++..+... . ....++.|+.+|++++ ++++.++.+++++....++.+++++|+..++..+..+..
T Consensus 113 ~~~~~~~~~~~~~~~~--~----~~~~~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~- 184 (425)
T 3ka7_A 113 LSYKDRMKIALLIVST--R----KNRPSGSSLQAWIKSQ-VSDEWLIKFADSFCGWALSLKSDEVPVEEVFEIIENMYR- 184 (425)
T ss_dssp SCHHHHHHHHHHHHHT--T----TSCCCSSBHHHHHHHH-CCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHH-
T ss_pred CCHHHHHHHHHHHHhh--h----hcCCCCCCHHHHHHHh-cCCHHHHHHHHHHHHHHhCCCcccchHHHHHHHHHHHHh-
Confidence 5777888876544311 1 0234689999999998 888889999999998888899999999988877665432
Q ss_pred cCCceeeeecCCCcccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhhHhhhCCc
Q 018523 82 KHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPE 161 (354)
Q Consensus 82 ~~g~~~~~~~Gg~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~l~~ll~~ 161 (354)
..+ ..+++||+ +.|+++|++.+++.|++|+++++|++|..+ ++++++|++ +|++++||+||+|+|++.+.+|+++
T Consensus 185 ~~~--~~~~~gG~-~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~-~~~~~gv~~-~g~~~~ad~VV~a~~~~~~~~ll~~ 259 (425)
T 3ka7_A 185 FGG--TGIPEGGC-KGIIDALETVISANGGKIHTGQEVSKILIE-NGKAAGIIA-DDRIHDADLVISNLGHAATAVLCSE 259 (425)
T ss_dssp HCS--CEEETTSH-HHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEE-TTEEEECSEEEECSCHHHHHHHTTT
T ss_pred cCC--ccccCCCH-HHHHHHHHHHHHHcCCEEEECCceeEEEEE-CCEEEEEEE-CCEEEECCEEEECCCHHHHHHhcCC
Confidence 222 45789997 799999999999999999999999999985 555766777 4788999999999999999999874
Q ss_pred ch-h--hhHHHHHhhccCCccEEEEEEEeccccccccCceeeccC--cccchhcccccccccccCCCCcEEEEEecCCCC
Q 018523 162 NW-K--EMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRS--SLLSVYADMSLTCKEYYNPNQSMLELVFAPAEE 236 (354)
Q Consensus 162 ~~-~--~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~~~~~~g~~~l~~~~~~~~~ 236 (354)
.. . +..+.+++.++++.+.++++++++++++. .+++++..+ ++..+ ..+|..+|+.+|+|++++.+......+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~-~~~~~~~~~~~~~~~~-~~~s~~~p~~ap~G~~~l~~~~~~~~~ 337 (425)
T 3ka7_A 260 ALSKEADAAYFKMVGTLQPSAGIKICLAADEPLVG-HTGVLLTPYTRRINGV-NEVTQADPELAPPGKHLTMCHQYVAPE 337 (425)
T ss_dssp TCCTTTTHHHHHHHHHCCCBEEEEEEEEESSCSSC-SSSEEECCSSSSEEEE-ECGGGTCGGGSCTTCEEEEEEEEECGG
T ss_pred cccccCCHHHHHHhhCcCCCceEEEEeecCCCccC-cCEEEECCChhhcceE-EeccCCCCCcCCCCCeEEEEEeccccc
Confidence 31 1 44567778888888889999999988764 345555433 22222 245556788899999888765432211
Q ss_pred CCCCChHHHHHHHHHHHHHhCCCCccccccccceeEEEEEEeCCCccccCCCCCCCCCCCCCCCCceEEeeccccCCCCC
Q 018523 237 WISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLA 316 (354)
Q Consensus 237 ~~~~~~ee~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~L~~aG~~~~~~~~~ 316 (354)
..+. .++.++.++++|++++|+.. .++ ..+.+|+.+.+.+.+|.. .++..++|++|||+||||+.+.++.
T Consensus 338 ~~~~-~~~~~~~~~~~l~~~~p~~~------~~~--~~v~~~~~~~P~~~~~~~-~~~~~~~p~~gL~laG~~~~~~gg~ 407 (425)
T 3ka7_A 338 NVKN-LESEIEMGLEDLKEIFPGKR------YEV--LLIQSYHDEWPVNRAASG-TDPGNETPFSGLYVVGDGAKGKGGI 407 (425)
T ss_dssp GGGG-HHHHHHHHHHHHHHHSTTCC------EEE--EEEEEEBTTBCSBSSCTT-CCCCSBCSSBTEEECSTTSCCTTCC
T ss_pred cccc-hHHHHHHHHHHHHHhCCCCc------eEE--EEEEEECCCccccccccC-CCCCCCCCcCCeEEeCCccCCCCCC
Confidence 1112 34557999999999999743 123 366789998888888743 4567788999999999999986668
Q ss_pred chhHHHHHHHHHHHHHHH
Q 018523 317 SMEGAVLSGKLCAQAIVQ 334 (354)
Q Consensus 317 ~~~gAi~sG~~aa~~il~ 334 (354)
+|++|+.||++||++|+.
T Consensus 408 gv~~~~~s~~~~~~~i~~ 425 (425)
T 3ka7_A 408 EVEGVALGVMSVMEKVLG 425 (425)
T ss_dssp HHHHHHHHHHHHHHC---
T ss_pred ccHHHHHHHHHHHHHhhC
Confidence 999999999999999873
No 2
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.97 E-value=4.7e-29 Score=240.93 Aligned_cols=293 Identities=16% Similarity=0.173 Sum_probs=212.3
Q ss_pred ccCCCHHHHHHHcCCChHHHHHHHHHHHhhhccCCcccccHHHHHHHHHHH------hhccCCceeeeecCCCcccchHH
Q 018523 28 QDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRF------LQEKHGSKMAFLDGNPPERLCLP 101 (354)
Q Consensus 28 ~d~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~~~~~------~~~~~g~~~~~~~Gg~~~~l~~~ 101 (354)
++++|+.+|+++++ .++.++.++++++...++.+++++|+.+++.++... +....+....++.||+ +.|+++
T Consensus 143 ~~~~s~~~~l~~~~-~~~~~~~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gG~-~~l~~~ 220 (520)
T 1s3e_A 143 WDNMTMKELLDKLC-WTESAKQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGGS-GQVSER 220 (520)
T ss_dssp HHTSBHHHHHHHHC-SSHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCSTTSTTSEEETTCT-HHHHHH
T ss_pred hhccCHHHHHHhhC-CCHHHHHHHHHHHhhhcCCChHHhHHHHHHHHHhhcCchhhhcccCCCcceEEEeCCH-HHHHHH
Confidence 67899999999984 455578899999988888999999999887665321 1111233356788997 799999
Q ss_pred HHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhhHhhhCCcchhhhHHHHHhhccCCccEE
Q 018523 102 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVI 181 (354)
Q Consensus 102 l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~ 181 (354)
|++.+ |++|++|++|++|..++ +.++ |++.+|++++||+||+|+|+..+.+++.+...+....+.++++++.++.
T Consensus 221 l~~~l---g~~i~~~~~V~~i~~~~-~~v~-v~~~~g~~~~ad~VI~a~p~~~l~~l~~~p~lp~~~~~~i~~~~~~~~~ 295 (520)
T 1s3e_A 221 IMDLL---GDRVKLERPVIYIDQTR-ENVL-VETLNHEMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQMITRVPLGSVI 295 (520)
T ss_dssp HHHHH---GGGEESSCCEEEEECSS-SSEE-EEETTSCEEEESEEEECSCGGGGGGSEEESCCCHHHHHHTTSCCBCCEE
T ss_pred HHHHc---CCcEEcCCeeEEEEECC-CeEE-EEECCCeEEEeCEEEECCCHHHHcceeeCCCCCHHHHHHHHhCCCcceE
Confidence 98765 88999999999999854 4464 8888898999999999999999988752211244556778888999999
Q ss_pred EEEEEeccccccc--cCceeec--cCcccchhcccccccccccCCC-CcEEE-EEec-CCCCCCCCChHHHHHHHHHHHH
Q 018523 182 NIHIWFDRKLKNT--YDHLLFS--RSSLLSVYADMSLTCKEYYNPN-QSMLE-LVFA-PAEEWISCSDSEIIDATMKELA 254 (354)
Q Consensus 182 ~v~l~~~~~~~~~--~~~~~~~--~~~~~~~~~~~s~~~~~~~~~g-~~~l~-~~~~-~~~~~~~~~~ee~~~~~~~~l~ 254 (354)
|+++.|++++|.. +.+..+. .......+.+.+ .+++ ..++. ++.. .++.|.+++++++++.+++.|+
T Consensus 296 kv~l~~~~~~w~~~~~~g~~~~~~~~~~~~~~~d~~------~~~~~~~~l~~~~~~~~a~~~~~~~~~e~~~~vl~~L~ 369 (520)
T 1s3e_A 296 KCIVYYKEPFWRKKDYCGTMIIDGEEAPVAYTLDDT------KPEGNYAAIMGFILAHKARKLARLTKEERLKKLCELYA 369 (520)
T ss_dssp EEEEECSSCGGGGGTEEEEEEECSTTCSCSEEEECC------CTTSCSCEEEEEEETHHHHHHTTSCHHHHHHHHHHHHH
T ss_pred EEEEEeCCCcccCCCCCceeeccCCCCceEEEeeCC------CCCCCCCEEEEEccchhhhhhhcCCHHHHHHHHHHHHH
Confidence 9999999999852 2233331 111111111222 1222 34544 3333 3456778899999999999999
Q ss_pred HhCCCCccccccccceeEEEEEEeCC-----Cccc--cCCCC-CCCCCCCCCCCCceEEeeccccCCCCCchhHHHHHHH
Q 018523 255 KLFPDEISADQSKAKIVKYHVVKTPR-----SVYK--TIPNC-EPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGK 326 (354)
Q Consensus 255 ~~~p~~~~~~~~~~~~~~~~~~~~~~-----~~~~--~~~g~-~~~~~~~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~ 326 (354)
+++|... ...+......+|.. +.|. +.||+ ...++..++|++||||||++++..|+++|+||+.||+
T Consensus 370 ~~~~~~~-----~~~p~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~l~~p~~~L~fAG~~t~~~~~g~v~GAi~SG~ 444 (520)
T 1s3e_A 370 KVLGSLE-----ALEPVHYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVLRQPVDRIYFAGTETATHWSGYMEGAVEAGE 444 (520)
T ss_dssp HHHTCGG-----GGCCSEEEEEEGGGCTTTCSSSCBCCCTTHHHHHGGGTTCCBTTEEECSGGGCSSSTTSHHHHHHHHH
T ss_pred HHhCccc-----cCCccEEEEEeeCCCCCCCCCCccccCCCccccchHHHhCCCCCEEEeehhhcCcCcEEhHHHHHHHH
Confidence 9998631 12456677777753 2332 34553 2234456788999999999998777789999999999
Q ss_pred HHHHHHHHHhhh
Q 018523 327 LCAQAIVQDYVL 338 (354)
Q Consensus 327 ~aa~~il~~~~~ 338 (354)
+||++|++.++.
T Consensus 445 ~aA~~i~~~l~~ 456 (520)
T 1s3e_A 445 RAAREILHAMGK 456 (520)
T ss_dssp HHHHHHHHHTTS
T ss_pred HHHHHHHHHHhc
Confidence 999999998854
No 3
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.96 E-value=1.7e-27 Score=224.15 Aligned_cols=301 Identities=12% Similarity=0.117 Sum_probs=205.7
Q ss_pred CChHHHHHHhhhhhHHHhccccccccccCCCHHHHHHHcCCChHHHHHHHHHHHhhhccCCcccccHHHHHHHHHHHhhc
Q 018523 2 LTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQE 81 (354)
Q Consensus 2 ls~~~k~~~~~~~~~~~~~~~~~~~~~d~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~~~~~~~~ 81 (354)
|++.+|.++...+.... ..+...+++|+.+|+++++++++.++.+++++....++.+++++|+..++..+..+..
T Consensus 103 l~~~~~~~~~~~~~~~~----~~~~~~~~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 177 (421)
T 3nrn_A 103 LSVKEKAKALKLLAEIR----MNKLPKEEIPADEWIKEKIGENEFLLSVLESFAGWADSVSLSDLTALELAKEIRAALR- 177 (421)
T ss_dssp CC--------CCHHHHH----TTCCCCCCSBHHHHHHHHTCCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHH-
T ss_pred CCHhHHHHHHHHHHHHH----hccCCCCCCCHHHHHHHhcCCcHHHHHHHHHHHHHhcCCCcccCCHHHHHHHHHHHhh-
Confidence 45666666654443211 0022335699999999988888889999999998888899999999988877665432
Q ss_pred cCCceeeeecCCCcccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhhHhhhCCc
Q 018523 82 KHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPE 161 (354)
Q Consensus 82 ~~g~~~~~~~Gg~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~l~~ll~~ 161 (354)
..+ ..+++||+ +.|+++|++.+++.|++|+++++|++|..+ ++++ | ..+|++++||+||+|+|++.+.+|++.
T Consensus 178 ~~g--~~~~~gG~-~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~-~~~v--V-~~~g~~~~ad~Vv~a~~~~~~~~ll~~ 250 (421)
T 3nrn_A 178 WGG--PGLIRGGC-KAVIDELERIIMENKGKILTRKEVVEINIE-EKKV--Y-TRDNEEYSFDVAISNVGVRETVKLIGR 250 (421)
T ss_dssp HCS--CEEETTCH-HHHHHHHHHHHHTTTCEEESSCCEEEEETT-TTEE--E-ETTCCEEECSEEEECSCHHHHHHHHCG
T ss_pred cCC--cceecCCH-HHHHHHHHHHHHHCCCEEEcCCeEEEEEEE-CCEE--E-EeCCcEEEeCEEEECCCHHHHHHhcCc
Confidence 122 46889997 899999999999999999999999999984 5545 4 457788999999999999999999874
Q ss_pred chhhhHHHHHhhccCCccEEEEEEEeccccccccCceeeccCcccchhcccccccccccCCCCcEEEEEecCCCCCCCCC
Q 018523 162 NWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCS 241 (354)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~g~~~l~~~~~~~~~~~~~~ 241 (354)
...+..+.+++.++.+.+.+++++.++++... .+++++.+++-...+..+|..++..+|+|++++.+..... ..+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~-~~~~~~~~~~~~~~i~~~s~~~p~~ap~G~~~~~~~~~~~----~~~ 325 (421)
T 3nrn_A 251 DYFDRDYLKQVDSIEPSEGIKFNLAVPGEPRI-GNTIVFTPGLMINGFNEPSALDKSLAREGYTLIMAHMALK----NGN 325 (421)
T ss_dssp GGSCHHHHHHHHTCCCCCEEEEEEEEESSCSS-CSSEEECTTSSSCEEECGGGTCGGGSCTTEEEEEEEEECT----TCC
T ss_pred ccCCHHHHHHHhCCCCCceEEEEEEEcCCccc-CCeEEEcCCcceeeEeccCCCCCCcCCCCceEEEEEEeec----ccc
Confidence 22344566778888888999999999987543 2455554432121122345566777888888776554311 234
Q ss_pred hHHHHHHHHHHHHHhCCCCccccccccceeEEEEEEeCCCccccCCCCCCCCCCCCCCCCceEEeeccccCCCCCchhHH
Q 018523 242 DSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGA 321 (354)
Q Consensus 242 ~ee~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~L~~aG~~~~~~~~~~~~gA 321 (354)
+++.++.++++|++++| .. +++ .+.+|+.+.+.+.+.... .+. .++ +|||+|||++.+.++..|++|
T Consensus 326 ~~~~~~~~~~~L~~~~p-~~-------~~~--~~~~~~~~~p~~~~~~~~-~~~-~~~-~gl~laGd~~~~~~g~~~~ga 392 (421)
T 3nrn_A 326 VKKAIEKGWEELLEIFP-EG-------EPL--LAQVYRDGNPVNRTRAGL-HIE-WPL-NEVLVVGDGYRPPGGIEVDGI 392 (421)
T ss_dssp HHHHHHHHHHHHHHHCT-TC-------EEE--EEEEC--------------CCC-CCC-SSEEECSTTCCCTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHcC-CC-------eEE--EeeeccCCCCcccccCCC-CCC-CCC-CcEEEECCcccCCCceeeehH
Confidence 45668999999999999 21 233 345566665554322111 122 677 999999999998633355999
Q ss_pred HHHHHHHHHHH
Q 018523 322 VLSGKLCAQAI 332 (354)
Q Consensus 322 i~sG~~aa~~i 332 (354)
+.||.+||++|
T Consensus 393 ~~sg~~aA~~l 403 (421)
T 3nrn_A 393 ALGVMKALEKL 403 (421)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 99999999998
No 4
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.96 E-value=1.4e-28 Score=236.25 Aligned_cols=293 Identities=12% Similarity=0.065 Sum_probs=209.5
Q ss_pred ccccCCCHHHHHHHcC--CChHHHHHHHHHHHhhhccCCcccccHHHHHHHHHHHhhc----cCCceeeeecCCCcccch
Q 018523 26 EAQDGLTVQEWMRKQG--VPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQE----KHGSKMAFLDGNPPERLC 99 (354)
Q Consensus 26 ~~~d~~s~~~~l~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~~~~~~~~----~~g~~~~~~~Gg~~~~l~ 99 (354)
..++++|+.+||++.+ +++. .+.++++++...++.+++++|+..++..+...... .......++.||+ +.|+
T Consensus 181 ~~~~~~s~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~-~~l~ 258 (495)
T 2vvm_A 181 RKYDEMSYSERIDQIRDELSLN-ERSSLEAFILLCSGGTLENSSFGEFLHWWAMSGYTYQGCMDCLMSYKFKDGQ-SAFA 258 (495)
T ss_dssp HHHHTSBHHHHHHHHGGGCCHH-HHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSSHHHHHHHHHSEEETTCH-HHHH
T ss_pred hhhhhhhHHHHHHHhhccCCHH-HHHHHHHHHHHhcCCCcchhhHHHHHHHHHHcCCCHHHHHhhhceEEeCCCH-HHHH
Confidence 3467899999999986 6665 56799999998888999999999988765321000 0011244678887 7999
Q ss_pred HHHHHHHHHcC-CEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhhHhhhCCcchhhhHHHHHhhccCCc
Q 018523 100 LPIVEHIQSLG-GEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGV 178 (354)
Q Consensus 100 ~~l~~~l~~~g-~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~l~~ll~~~~~~~~~~~~~~~~~~~ 178 (354)
++|++.+++.| ++|+++++|++|+.+++ .+ .|++.+|++++||+||+|+|++.+.++.-....|....++++.+.|.
T Consensus 259 ~~l~~~l~~~g~~~i~~~~~V~~i~~~~~-~v-~v~~~~g~~~~ad~vI~a~~~~~l~~i~~~p~lp~~~~~ai~~~~~~ 336 (495)
T 2vvm_A 259 RRFWEEAAGTGRLGYVFGCPVRSVVNERD-AA-RVTARDGREFVAKRVVCTIPLNVLSTIQFSPALSTERISAMQAGHVS 336 (495)
T ss_dssp HHHHHHHHTTTCEEEESSCCEEEEEECSS-SE-EEEETTCCEEEEEEEEECCCGGGGGGSEEESCCCHHHHHHHHHCCCC
T ss_pred HHHHHHhhhcCceEEEeCCEEEEEEEcCC-EE-EEEECCCCEEEcCEEEECCCHHHHhheeeCCCCCHHHHHHHHhcCCC
Confidence 99999998888 99999999999998544 46 48888888899999999999999998741111244566778888999
Q ss_pred cEEEEEEEeccccccccCceeeccCcccchhcccccccccccCCCCcEEEEEecCCCCCCCCChHHHHHHHHHHHHHhCC
Q 018523 179 PVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFP 258 (354)
Q Consensus 179 ~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~g~~~l~~~~~~~~~~~~~~~ee~~~~~~~~l~~~~p 258 (354)
+..|+++.|++++|.++.++..++.++..++.+ ...|.+..++......... +++++..+.+++.|++++|
T Consensus 337 ~~~kv~l~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~~~~vl~~~~~~~~~---~~~~e~~~~~~~~L~~~~~ 407 (495)
T 2vvm_A 337 MCTKVHAEVDNKDMRSWTGIAYPFNKLCYAIGD------GTTPAGNTHLVCFGNSANH---IQPDEDVRETLKAVGQLAP 407 (495)
T ss_dssp CCEEEEEEESCGGGGGEEEEECSSCSSCEEEEE------EECTTSCEEEEEEECSTTC---CCTTTCHHHHHHHHHTTST
T ss_pred ceeEEEEEECCccCCCceeEecCCCCcEEEecC------CCCCCCCeEEEEEeCcccc---CCCHHHHHHHHHHHHHhcC
Confidence 999999999998875443333333333322211 1123444555543322211 4555667889999999988
Q ss_pred CCccccccccceeEEEEEEeCC-----Cccc-cCCCCC-CCCCCCCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHH
Q 018523 259 DEISADQSKAKIVKYHVVKTPR-----SVYK-TIPNCE-PCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQA 331 (354)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~g~~-~~~~~~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~ 331 (354)
... .+....+.+|.. +.|. +.||+. ...+.+++|.+||||||++++..|+++|+||+.||++||++
T Consensus 408 ~~~-------~~~~~~~~~W~~dp~~~g~y~~~~~g~~~~~~~~l~~p~~~l~fAGe~t~~~~~g~veGAi~SG~raA~~ 480 (495)
T 2vvm_A 408 GTF-------GVKRLVFHNWVKDEFAKGAWFFSRPGMVSECLQGLREKHGGVVFANSDWALGWRSFIDGAIEEGTRAARV 480 (495)
T ss_dssp TSC-------CEEEEEECCTTTCTTTSSSSCCCCTTHHHHHHHHHHCCBTTEEECCGGGCSSSTTSHHHHHHHHHHHHHH
T ss_pred CCC-------CceEEEEeEcCCCCCCCCCccCcCCCcchhhHHHHhCcCCCEEEechhhhcCCceEEEhHHHHHHHHHHH
Confidence 632 356666777843 3333 345642 22344567889999999999977778999999999999999
Q ss_pred HHHHhhh
Q 018523 332 IVQDYVL 338 (354)
Q Consensus 332 il~~~~~ 338 (354)
|++.++.
T Consensus 481 i~~~l~~ 487 (495)
T 2vvm_A 481 VLEELGT 487 (495)
T ss_dssp HHHHHCC
T ss_pred HHHHhcc
Confidence 9988753
No 5
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.96 E-value=1.1e-28 Score=234.45 Aligned_cols=290 Identities=15% Similarity=0.154 Sum_probs=205.8
Q ss_pred cccCCCHHHHHHHcCCChHHHHHHHHHHHhhhccCCcc-cccHHHHHHHHHHH------hhccCCceeeeecCCCcccch
Q 018523 27 AQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPD-ELSMQCILIALNRF------LQEKHGSKMAFLDGNPPERLC 99 (354)
Q Consensus 27 ~~d~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~sa~~~~~~~~~~------~~~~~g~~~~~~~Gg~~~~l~ 99 (354)
.++++|+.+|+++++. ++.++.++++++...++.+++ ++|+.+++..+... +. ..+....++.||+ +.|+
T Consensus 142 ~~~~~s~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~gG~-~~l~ 218 (453)
T 2yg5_A 142 DLDTVSFKQWLINQSD-DAEARDNIGLFIAGGMLTKPAHSFSALQAVLMAASAGSFSHLVD-EDFILDKRVIGGM-QQVS 218 (453)
T ss_dssp HHHSSBHHHHHHHHCS-CHHHHHHHHHHHCCCCCCSCTTSSBHHHHHHHHHHTTCHHHHHC-HHHHTCEEETTCT-HHHH
T ss_pred hhhhccHHHHHHhhcC-CHHHHHHHHHHHHhhcccCCcccccHHHHHHHhccCCcHhhhcc-CCCcceEEEcCCh-HHHH
Confidence 4678999999999854 555777999998877888999 99999887655331 00 0112245789997 7999
Q ss_pred HHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhhHhhhCCcchhhhHHHHHhhccCCcc
Q 018523 100 LPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVP 179 (354)
Q Consensus 100 ~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~l~~ll~~~~~~~~~~~~~~~~~~~~ 179 (354)
++|++.+ |++|++|++|++|..++++.+ .|++ +|++++||+||+|+|+..+.+++.....|....++++++++.+
T Consensus 219 ~~l~~~l---g~~i~~~~~V~~i~~~~~~~v-~v~~-~~~~~~ad~VI~a~p~~~~~~l~~~p~lp~~~~~~i~~~~~~~ 293 (453)
T 2yg5_A 219 IRMAEAL---GDDVFLNAPVRTVKWNESGAT-VLAD-GDIRVEASRVILAVPPNLYSRISYDPPLPRRQHQMHQHQSLGL 293 (453)
T ss_dssp HHHHHHH---GGGEECSCCEEEEEEETTEEE-EEET-TTEEEEEEEEEECSCGGGGGGSEEESCCCHHHHHHGGGEEECC
T ss_pred HHHHHhc---CCcEEcCCceEEEEEeCCceE-EEEE-CCeEEEcCEEEEcCCHHHHhcCEeCCCCCHHHHHHHhcCCCcc
Confidence 9998655 889999999999998543314 3665 6788999999999999999887532113445566788888889
Q ss_pred EEEEEEEeccccccc--cCceeecc-CcccchhcccccccccccCCC-CcEEE-EEec-CCCCCCCCChHHHHHHHHHHH
Q 018523 180 VINIHIWFDRKLKNT--YDHLLFSR-SSLLSVYADMSLTCKEYYNPN-QSMLE-LVFA-PAEEWISCSDSEIIDATMKEL 253 (354)
Q Consensus 180 ~~~v~l~~~~~~~~~--~~~~~~~~-~~~~~~~~~~s~~~~~~~~~g-~~~l~-~~~~-~~~~~~~~~~ee~~~~~~~~l 253 (354)
..|+++.|++++|.. +.+.++.+ .++..++ +.+ .+++ ..++. ++.. .++.|..++++++++.+++.|
T Consensus 294 ~~kv~l~~~~~~w~~~~~~g~~~~~~~~~~~~~-~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L 366 (453)
T 2yg5_A 294 VIKVHAVYETPFWREDGLSGTGFGASEVVQEVY-DNT------NHEDDRGTLVAFVSDEKADAMFELSAEERKATILASL 366 (453)
T ss_dssp EEEEEEEESSCGGGGGTEEEEEECTTSSSCEEE-ECC------CTTCSSEEEEEEEEHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred eEEEEEEECCCCCCCCCCCceeecCCCCeEEEE-eCC------CCCCCCCEEEEEeccHHHHHHhcCCHHHHHHHHHHHH
Confidence 999999999998852 22333332 2322222 222 2333 34444 3333 345676788999999999999
Q ss_pred HHhCCCCccccccccceeEEEEEEeCC-----Cccc--cCCCC-CCCCCCCCCCCCceEEeeccccCCCCCchhHHHHHH
Q 018523 254 AKLFPDEISADQSKAKIVKYHVVKTPR-----SVYK--TIPNC-EPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSG 325 (354)
Q Consensus 254 ~~~~p~~~~~~~~~~~~~~~~~~~~~~-----~~~~--~~~g~-~~~~~~~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG 325 (354)
++++|... ..++.....+|.. +.|. +.||. ....+..++|++||||||++++..|+++|+||+.||
T Consensus 367 ~~~~~~~~------~~p~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~~~~p~~~l~~aG~~~~~~~~g~v~gA~~SG 440 (453)
T 2yg5_A 367 ARYLGPKA------EEPVVYYESDWGSEEWTRGCYAASFDLGGLHRYGADSRTPVGPIHFSCSDIAAEGYQHVDGAVRMG 440 (453)
T ss_dssp HHHHCGGG------GCCSEEEECCTTTCTTTCSSSCEEECTTHHHHHGGGTTCCBTTEEECCGGGCSTTTTSHHHHHHHH
T ss_pred HHHhCccC------CCccEEEEeecCCCCCCCCCCcCcCCCCccccchHHHhCCcCceEEeecccccccccchHHHHHHH
Confidence 99998521 2456666677753 2322 34553 122345678899999999999877778999999999
Q ss_pred HHHHHHHHHHhh
Q 018523 326 KLCAQAIVQDYV 337 (354)
Q Consensus 326 ~~aa~~il~~~~ 337 (354)
++||++|++.++
T Consensus 441 ~~aA~~i~~~l~ 452 (453)
T 2yg5_A 441 QRTAADIIARSK 452 (453)
T ss_dssp HHHHHHHHHHC-
T ss_pred HHHHHHHHHHhc
Confidence 999999998764
No 6
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.96 E-value=1.1e-27 Score=229.03 Aligned_cols=310 Identities=14% Similarity=0.161 Sum_probs=215.6
Q ss_pred CChHHHHHHhhhhhHHHhccccccccccCCCHHHHHHHcCCChHHHHHHHHHHHhhhccCCcccccHHHHHHHHHHHhh-
Q 018523 2 LTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQ- 80 (354)
Q Consensus 2 ls~~~k~~~~~~~~~~~~~~~~~~~~~d~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~~~~~~~- 80 (354)
+++.+|.+++..++ . ......+++|+.+|+++. ++++.++.++++++...++.+++++|+.+++..+..+..
T Consensus 126 ~~~~~~~~~~~~~~----~--~~~~~~~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 198 (478)
T 2ivd_A 126 LPLGARLRVAGELF----S--RRAPEGVDESLAAFGRRH-LGHRATQVLLDAVQTGIYAGDVEQLSVAATFPMLVKMERE 198 (478)
T ss_dssp SCHHHHHHHHGGGG----C--CCCCTTCCCBHHHHHHHH-TCHHHHHHTHHHHHHHHHCCCTTTBBHHHHCHHHHHHHHH
T ss_pred CCHHHHHHHhhhhh----c--CCCCCCCCCCHHHHHHHh-hCHHHHHHHHHHHhceeecCCHHHhhHHHHhHHHHHHHHh
Confidence 45566666543322 1 112346889999999997 899999999999999999999999999877654432110
Q ss_pred ---------------------ccCC----ceeeeecCCCcccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEE
Q 018523 81 ---------------------EKHG----SKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL 135 (354)
Q Consensus 81 ---------------------~~~g----~~~~~~~Gg~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~ 135 (354)
...+ ..+.+++||+ +.|+++|++.+ |++|+++++|++|..++++ + +|++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~-~~l~~~l~~~l---g~~i~~~~~V~~i~~~~~~-~-~v~~ 272 (478)
T 2ivd_A 199 HRSLILGAIRAQKAQRQAALPAGTAPKLSGALSTFDGGL-QVLIDALAASL---GDAAHVGARVEGLAREDGG-W-RLII 272 (478)
T ss_dssp HSSHHHHHHHHHHHHTCC----CCSCCCCCCEEEETTCT-HHHHHHHHHHH---GGGEESSEEEEEEECC--C-C-EEEE
T ss_pred cCcHHHHHHHhhhccccccCcccccccccccEEEECCCH-HHHHHHHHHHh---hhhEEcCCEEEEEEecCCe-E-EEEE
Confidence 0012 3467889997 79999999766 7899999999999986444 5 4777
Q ss_pred ---cCCeEEEcCEEEEccChhhHhhhCCcchhhhHHHHHhhccCCccEEEEEEEeccccccccC--ceeecc---Ccccc
Q 018523 136 ---TNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYD--HLLFSR---SSLLS 207 (354)
Q Consensus 136 ---~~g~~~~ad~VI~a~p~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~--~~~~~~---~~~~~ 207 (354)
.+|++++||+||+|+|++.+.+++++. +....+.++++++.++.++++.+++++|+... +.+.+. .+...
T Consensus 273 ~~~~~g~~~~ad~vV~a~~~~~~~~ll~~l--~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (478)
T 2ivd_A 273 EEHGRRAELSVAQVVLAAPAHATAKLLRPL--DDALAALVAGIAYAPIAVVHLGFDAGTLPAPDGFGFLVPAEEQRRMLG 350 (478)
T ss_dssp EETTEEEEEECSEEEECSCHHHHHHHHTTT--CHHHHHHHHTCCBCCEEEEEEEECTTSSCCCCSSEEECCGGGCCSCCE
T ss_pred eecCCCceEEcCEEEECCCHHHHHHHhhcc--CHHHHHHHhcCCCCcEEEEEEEEccccCCCCCceEEEecCCCCCceEE
Confidence 677789999999999999999988753 44556778888999999999999998764211 122221 12222
Q ss_pred hhcccccccccccCCCCcEEEEEec--CCCCCCCCChHHHHHHHHHHHHHhCCCCccccccccceeEEEEEEeCCCcccc
Q 018523 208 VYADMSLTCKEYYNPNQSMLELVFA--PAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKT 285 (354)
Q Consensus 208 ~~~~~s~~~~~~~~~g~~~l~~~~~--~~~~~~~~~~ee~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (354)
++.+ +...+..+|++.+++++... ....|.+.+++++++.+++.|++++|... .+....+++|+.+.+.+
T Consensus 351 ~~~~-s~~~~~~~p~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-------~p~~~~~~~w~~~~p~~ 422 (478)
T 2ivd_A 351 AIHA-STTFPFRAEGGRVLYSCMVGGARQPGLVEQDEDALAALAREELKALAGVTA-------RPSFTRVFRWPLGIPQY 422 (478)
T ss_dssp EEEH-HHHCGGGBSTTCEEEEEEEECTTCGGGGGSCHHHHHHHHHHHHHHHHCCCS-------CCSEEEEEEESSCCBCC
T ss_pred EEEE-cccCCCcCCCCCEEEEEEeCCcCCccccCCCHHHHHHHHHHHHHHHhCCCC-------CCcEEEEEECCCcccCC
Confidence 2211 11123334566667665443 23445678899999999999999998753 34556678899886666
Q ss_pred CCCCCC----CCCCCCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHHHhhh
Q 018523 286 IPNCEP----CRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVL 338 (354)
Q Consensus 286 ~~g~~~----~~~~~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~~~~~ 338 (354)
.+|+.. .++.... .+||||||+++.+ .+|++|+.||.++|++|++.+++
T Consensus 423 ~~g~~~~~~~~~~~~~~-~~~l~~aG~~~~g---~gv~gA~~SG~~aA~~i~~~l~~ 475 (478)
T 2ivd_A 423 NLGHLERVAAIDAALQR-LPGLHLIGNAYKG---VGLNDCIRNAAQLADALVAGNTS 475 (478)
T ss_dssp BTTHHHHHHHHHHHHHT-STTEEECSTTTSC---CSHHHHHHHHHHHHHHHCC----
T ss_pred CcCHHHHHHHHHHHHhh-CCCEEEEccCCCC---CCHHHHHHHHHHHHHHHHHhhcc
Confidence 776421 1111122 5899999999843 57999999999999999877643
No 7
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.95 E-value=3.5e-28 Score=231.73 Aligned_cols=290 Identities=17% Similarity=0.204 Sum_probs=211.7
Q ss_pred ccccCCCHHHHHHHcCCChHHHHHHHHHHHhhhccCCcccccHHHHHHHHHHH-------hhc---------------cC
Q 018523 26 EAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRF-------LQE---------------KH 83 (354)
Q Consensus 26 ~~~d~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~~~~~-------~~~---------------~~ 83 (354)
...+++|+.+|++++ ++++..+.++++++.++++.+++++|+...+..+..+ ... ..
T Consensus 145 ~~~~~~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (470)
T 3i6d_A 145 KTKDDQSLGEFFRRR-VGDEVVENLIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGMKKTRPQGSGQQLTAKK 223 (470)
T ss_dssp SSSSCCBHHHHHHHH-SCHHHHHHTHHHHHHHTTCSCTTTBBHHHHCGGGCC----------------------------
T ss_pred CCCCCcCHHHHHHHh-cCHHHHHHhccchhcEEecCCHHHhhHHHHHHHHHHHHHhcCcHHHHHHhhccccccccccccC
Confidence 356889999999997 8999999999999999999999999998776543111 000 00
Q ss_pred CceeeeecCCCcccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhhHhhhCCcch
Q 018523 84 GSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENW 163 (354)
Q Consensus 84 g~~~~~~~Gg~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~l~~ll~~~~ 163 (354)
+..+.++.||+ +.|++.|++.+.+ ++|+++++|++|+.++++ + .|++.+|++++||+||+|+|++.+.+++++.
T Consensus 224 ~~~~~~~~~g~-~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~-~-~v~~~~g~~~~ad~vi~a~p~~~~~~l~~~~- 297 (470)
T 3i6d_A 224 QGQFQTLSTGL-QTLVEEIEKQLKL--TKVYKGTKVTKLSHSGSC-Y-SLELDNGVTLDADSVIVTAPHKAAAGMLSEL- 297 (470)
T ss_dssp ---EEEETTCT-HHHHHHHHHTCCS--EEEECSCCEEEEEECSSS-E-EEEESSSCEEEESEEEECSCHHHHHHHTTTS-
T ss_pred CceEEEeCChH-HHHHHHHHHhcCC--CEEEeCCceEEEEEcCCe-E-EEEECCCCEEECCEEEECCCHHHHHHHcCCc-
Confidence 22466788997 7888888865532 799999999999986554 6 4888889889999999999999999987653
Q ss_pred hhhHHHHHhhccCCccEEEEEEEeccccccc-cC--ceeeccCcc---cchhcccccccccccCCCCcEEEEEec--CCC
Q 018523 164 KEMAYFKRLEKLVGVPVINIHIWFDRKLKNT-YD--HLLFSRSSL---LSVYADMSLTCKEYYNPNQSMLELVFA--PAE 235 (354)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~-~~--~~~~~~~~~---~~~~~~~s~~~~~~~~~g~~~l~~~~~--~~~ 235 (354)
+..+++.+++|.++.++++.|++++|.. .. +++++.... ..+.. .+...+...|.+..++.+.+. ...
T Consensus 298 ---~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~-~s~~~~~~~p~~~~~l~~~~~~~~~~ 373 (470)
T 3i6d_A 298 ---PAISHLKNMHSTSVANVALGFPEGSVQMEHEGTGFVISRNSDFAITACTW-TNKKWPHAAPEGKTLLRAYVGKAGDE 373 (470)
T ss_dssp ---TTHHHHHTCEEEEEEEEEEEESSTTCCCSSCSSEEEECSTTCCSEEEEEE-HHHHCGGGSCTTCEEEEEEECCSSCC
T ss_pred ---hhhHHHhcCCCCceEEEEEEECchhcCCCCCCeEEEccCCCCCCceEEEE-EcCcCCCcCCCCCEEEEEEECCCCCc
Confidence 2345678888999999999999998842 22 333333221 11111 111122334556666665543 234
Q ss_pred CCCCCChHHHHHHHHHHHHHhCCCCccccccccceeEEEEEEeCCCccccCCCCCC----CCCCCCCCCCceEEeecccc
Q 018523 236 EWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEP----CRPLQRSPVEGFYLAGDYTK 311 (354)
Q Consensus 236 ~~~~~~~ee~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~----~~~~~~~~~~~L~~aG~~~~ 311 (354)
.+..++++++++.++++|.+++|... ++....+++|+++.+.+.+|... .++.+.++.+||||||+++.
T Consensus 374 ~~~~~~~~~~~~~~~~~l~~~~g~~~-------~p~~~~~~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~ 446 (470)
T 3i6d_A 374 SIVDLSDNDIINIVLEDLKKVMNING-------EPEMTCVTRWHESMPQYHVGHKQRIKELREALASAYPGVYMTGASFE 446 (470)
T ss_dssp GGGTSCHHHHHHHHHHHHGGGSCCCS-------CCSEEEEEEEEEEEEECBTTHHHHHHHHHHHHHHHSTTEEECSTTTS
T ss_pred cccCCCHHHHHHHHHHHHHHHhCCCC-------CceEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhhCCCEEEEeecCC
Confidence 46678999999999999999998643 45677888999888778887421 12223456789999999987
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHh
Q 018523 312 QKYLASMEGAVLSGKLCAQAIVQDY 336 (354)
Q Consensus 312 ~~~~~~~~gAi~sG~~aa~~il~~~ 336 (354)
+ .+|++|+.||.++|++|++.+
T Consensus 447 g---~gv~~a~~sG~~aA~~i~~~l 468 (470)
T 3i6d_A 447 G---VGIPDCIDQGKAAVSDALTYL 468 (470)
T ss_dssp C---CSHHHHHHHHHHHHHHHHHHH
T ss_pred C---CCHHHHHHHHHHHHHHHHHHh
Confidence 5 579999999999999999876
No 8
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.95 E-value=7.9e-28 Score=229.85 Aligned_cols=292 Identities=15% Similarity=0.180 Sum_probs=209.2
Q ss_pred cccCCCHHHHHHHcCCChHHHHHHHHHHHhhhccCCcccccHHHHHHHHHHHh-----------hcc-------------
Q 018523 27 AQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFL-----------QEK------------- 82 (354)
Q Consensus 27 ~~d~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~~~~~~-----------~~~------------- 82 (354)
..+++|+.+|++++ ++++..+.++++++...++.+++++|+...+..+..+. ..+
T Consensus 144 ~~~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 222 (475)
T 3lov_A 144 PEQDIPLGEYLRPR-LGDALVEKLIEPLLSGIYAGNIDQMSTFATYPQFVANEQKAGSLFEGMRLMRPLDQLPQTPQTTI 222 (475)
T ss_dssp CSSCCBHHHHHHHH-HCHHHHHHTHHHHHHGGGCCCTTTSBSTTTCHHHHHHHHHHSSHHHHHHHTCC------------
T ss_pred CCCCcCHHHHHHHH-hCHHHHHHHHHHHhceeecCChHHcCHHHHHHHHHHHHHhcCcHHHHHHHhcccccccccccccc
Confidence 56889999999997 88999999999999999999999999876554432210 001
Q ss_pred -CCceeeeecCCCcccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhhHhhhCCc
Q 018523 83 -HGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPE 161 (354)
Q Consensus 83 -~g~~~~~~~Gg~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~l~~ll~~ 161 (354)
.+..+.+++||+ +.|+++|++.+.+ ++|+++++|++|+.++++ + .|++.+| +++||+||+|+|++.+.+++++
T Consensus 223 ~~~~~~~~~~~G~-~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~-~-~v~~~~g-~~~ad~vV~a~p~~~~~~ll~~ 296 (475)
T 3lov_A 223 KATGQFLSLETGL-ESLIERLEEVLER--SEIRLETPLLAISREDGR-Y-RLKTDHG-PEYADYVLLTIPHPQVVQLLPD 296 (475)
T ss_dssp --CCSEEEETTCH-HHHHHHHHHHCSS--CEEESSCCCCEEEEETTE-E-EEECTTC-CEEESEEEECSCHHHHHHHCTT
T ss_pred cCCCcEEeeCChH-HHHHHHHHhhccC--CEEEcCCeeeEEEEeCCE-E-EEEECCC-eEECCEEEECCCHHHHHHHcCc
Confidence 123467889998 7899999876643 799999999999986444 5 4888888 8999999999999999999876
Q ss_pred chhhhHHHHHhhccCCccEEEEEEEeccccccccC--ceeeccC-c--ccchhcccccccccccCCCCcEEEEEec--CC
Q 018523 162 NWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYD--HLLFSRS-S--LLSVYADMSLTCKEYYNPNQSMLELVFA--PA 234 (354)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~--~~~~~~~-~--~~~~~~~~s~~~~~~~~~g~~~l~~~~~--~~ 234 (354)
. +. +.+.+++|.++.++++.|+++++.+.. +++++.. + +..+..+ +...+...|. ..++..++. ..
T Consensus 297 ~--~~---~~~~~~~~~~~~~v~l~~~~~~~~~~~g~g~l~~~~~~~~~~~~~~~-s~~~~~~~p~-~~~l~~~~~~~~~ 369 (475)
T 3lov_A 297 A--HL---PELEQLTTHSTATVTMIFDQQQSLPIEGTGFVVNRRAPYSITACTAI-DQKWNHSAPD-HTVLRAFVGRPGN 369 (475)
T ss_dssp S--CC---HHHHTCCEEEEEEEEEEEECCSSCSSSSSEEEECTTSSCSEEEEEEH-HHHCTTTCTT-EEEEEEEECBTTB
T ss_pred c--CH---HHHhcCCCCeEEEEEEEECCcCCCCCCCEEEEecCCCCCceEEEEEE-cccCCCCCCC-cEEEEEEeCCCCC
Confidence 3 22 567788999999999999988743222 2333332 2 1111111 1111222343 455554432 23
Q ss_pred CCCCCCChHHHHHHHHHHHHHhCCCCccccccccceeEEEEEEeCCCccccCCCCCC----CCCCCCCCCCceEEeeccc
Q 018523 235 EEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEP----CRPLQRSPVEGFYLAGDYT 310 (354)
Q Consensus 235 ~~~~~~~~ee~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~----~~~~~~~~~~~L~~aG~~~ 310 (354)
..+..++++++++.++++|++++|... .+....+++|+++.+.+.+|... .++.++++++||||||+++
T Consensus 370 ~~~~~~~~e~~~~~~~~~L~~~~g~~~-------~p~~~~v~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~ 442 (475)
T 3lov_A 370 DHLVHESDEVLQQAVLQDLEKICGRTL-------EPKQVIISRLMDGLPAYTVGHADRIQRVREEVLAQYPGIYLAGLAY 442 (475)
T ss_dssp CGGGGSCHHHHHHHHHHHHHHHHSSCC-------CCSEEEEEEEEEEEECCCTTHHHHHHHHHHHHHHHSTTEEECSTTT
T ss_pred CcccCCCHHHHHHHHHHHHHHHhCCCC-------CCeEEEEEEcccCCCCCCCChHHHHHHHHHHHHhhCCCEEEEccCC
Confidence 456678999999999999999998642 45677888999988778887521 1222345678999999998
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHHHhhhHHHh
Q 018523 311 KQKYLASMEGAVLSGKLCAQAIVQDYVLLAAR 342 (354)
Q Consensus 311 ~~~~~~~~~gAi~sG~~aa~~il~~~~~~~~~ 342 (354)
.+ .+|++|+.||+++|++|+..++..|..
T Consensus 443 ~g---~g~~~a~~sG~~aA~~i~~~l~~~~~~ 471 (475)
T 3lov_A 443 DG---VGLPDCVASAKTMIESIELEQSHTDES 471 (475)
T ss_dssp SC---SSHHHHHHHHHHHHHHHHHTC------
T ss_pred CC---CCHHHHHHHHHHHHHHHHHHhhccccc
Confidence 75 579999999999999999998877653
No 9
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.95 E-value=1.6e-27 Score=227.73 Aligned_cols=291 Identities=15% Similarity=0.143 Sum_probs=213.9
Q ss_pred cccCCCHHHHHHHcCCChHHHHHHHHHHHhhhccCCcccccHHHHHHHHHHH-----------hh---------------
Q 018523 27 AQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRF-----------LQ--------------- 80 (354)
Q Consensus 27 ~~d~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~~~~~-----------~~--------------- 80 (354)
..+++|+.+|++++ ++++..+.++++++.++++.+++++|+.+++..+..+ +.
T Consensus 140 ~~~~~s~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~l~~~e~~~gsl~~~~~~~~~~~~~~~~~~~~~ 218 (477)
T 3nks_A 140 KEPDETVHSFAQRR-LGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQ 218 (477)
T ss_dssp CSSCCBHHHHHHHH-HCHHHHHHTHHHHHHHHHSSCTTTBBHHHHCHHHHHHHHHHSCHHHHHHHC-----CCCCHHHHH
T ss_pred CCCCcCHHHHHHHh-hCHHHHHHHHHHHhcccccCCHHHhhHHHHHHHHHHHHHHcCCHHHHHHHhcccccCCchhhhhh
Confidence 45789999999997 8999999999999999999999999999987654321 00
Q ss_pred -ccCCceeeeecCCCcccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhhHhhhC
Q 018523 81 -EKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQL 159 (354)
Q Consensus 81 -~~~g~~~~~~~Gg~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~l~~ll 159 (354)
...+..+.++.||+ +.|+++|++.+++.|++|+++++|++|..++++.+ .|++ ++++++||+||+|+|++.+.+|+
T Consensus 219 ~~~~~~~~~~~~gG~-~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~-~v~~-~~~~~~ad~vv~a~p~~~~~~ll 295 (477)
T 3nks_A 219 ALAERWSQWSLRGGL-EMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRW-KVSL-RDSSLEADHVISAIPASVLSELL 295 (477)
T ss_dssp HHHTTCSEEEETTCT-THHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCE-EEEC-SSCEEEESEEEECSCHHHHHHHS
T ss_pred hcccCccEEEECCCH-HHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceE-EEEE-CCeEEEcCEEEECCCHHHHHHhc
Confidence 01122467889998 79999999999999999999999999998544424 4766 55589999999999999999998
Q ss_pred CcchhhhHHHHHhhccCCccEEEEEEEecccccc--ccCceeecc---Ccccchhccccccccccc-CCCCcEEEEEec-
Q 018523 160 PENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKN--TYDHLLFSR---SSLLSVYADMSLTCKEYY-NPNQSMLELVFA- 232 (354)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~--~~~~~~~~~---~~~~~~~~~~s~~~~~~~-~~g~~~l~~~~~- 232 (354)
++. +.+..+.+.+++|.++.++++.|++++|+ ++ +++++. .+..++..+.+ ..+... +++.+++++++.
T Consensus 296 ~~~--~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~-g~l~~~~~~~~~~~~~~~s~-~~~~~~~~~~~~~l~~~~gg 371 (477)
T 3nks_A 296 PAE--AAPLARALSAITAVSVAVVNLQYQGAHLPVQGF-GHLVPSSEDPGVLGIVYDSV-AFPEQDGSPPGLRVTVMLGG 371 (477)
T ss_dssp CGG--GHHHHHHHHTCCEEEEEEEEEEETTCCCSSCSS-EEECCTTTCSSEEEEECHHH-HCGGGSTTTTCEEEEEEECH
T ss_pred ccc--CHHHHHHHhcCCCCcEEEEEEEECCCCCCCCCc-eEEccCCCCCCceEEEEecc-ccCCCCCCCCceEEEEEECC
Confidence 864 23566778888999999999999998874 33 333332 22333322221 112221 335677765543
Q ss_pred C-CCCC----CCCChHHHHHHHHHHHHHhCCCCccccccccceeEEEEEEeCCCccccCCCCCCCC----CCCCCCCCce
Q 018523 233 P-AEEW----ISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCR----PLQRSPVEGF 303 (354)
Q Consensus 233 ~-~~~~----~~~~~ee~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~~~~L 303 (354)
. ...+ ..++++++++.++++|.++++... ++....+++|+++.+.+.+|+.... .......+||
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~-------~~~~~~v~rw~~a~p~~~~g~~~~~~~~~~~l~~~~~~l 444 (477)
T 3nks_A 372 SWLQTLEASGCVLSQELFQQRAQEAAATQLGLKE-------MPSHCLVHLHKNCIPQYTLGHWQKLESARQFLTAHRLPL 444 (477)
T ss_dssp HHHHHHHHSSCCCCHHHHHHHHHHHHHHHHCCCS-------CCSEEEEEEEEEEEECCBTTHHHHHHHHHHHHHHTTCSE
T ss_pred ccccccccccCCCCHHHHHHHHHHHHHHHhCCCC-------CCcEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhcCCCE
Confidence 1 1111 246899999999999999997532 4567888999999988888853211 1111223689
Q ss_pred EEeeccccCCCCCchhHHHHHHHHHHHHHHHH
Q 018523 304 YLAGDYTKQKYLASMEGAVLSGKLCAQAIVQD 335 (354)
Q Consensus 304 ~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~~ 335 (354)
++||||+.+ .+|++|+.||+++|++|+.+
T Consensus 445 ~l~G~~~~G---~gv~~a~~sg~~aA~~il~~ 473 (477)
T 3nks_A 445 TLAGASYEG---VAVNDCIESGRQAAVSVLGT 473 (477)
T ss_dssp EECSTTTSC---CSHHHHHHHHHHHHHHHHHC
T ss_pred EEEccCCCC---CcHHHHHHHHHHHHHHHHhc
Confidence 999999865 58999999999999999875
No 10
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.95 E-value=1.1e-27 Score=230.44 Aligned_cols=314 Identities=16% Similarity=0.127 Sum_probs=211.1
Q ss_pred CChHHHHHHhhhhhHHHhcccc--ccccccCCCHHHHHHHcCCChHHHHHHHHHHHhhhccCCcccccHHHHHHHHHHH-
Q 018523 2 LTWPEKVKFAIGLLPAIIGGQA--YVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRF- 78 (354)
Q Consensus 2 ls~~~k~~~~~~~~~~~~~~~~--~~~~~d~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~~~~~- 78 (354)
+++.+|++++...+ +.... .....+++|+.+|++++ ++++.++.+++|++..+++.+++++|+.+++..+..+
T Consensus 122 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 197 (504)
T 1sez_A 122 LSTGSKLQMLLEPI---LWKNKKLSQVSDSHESVSGFFQRH-FGKEVVDYLIDPFVAGTCGGDPDSLSMHHSFPELWNLE 197 (504)
T ss_dssp SCHHHHHHHHTHHH---HC----------CCCBHHHHHHHH-HCHHHHHTTHHHHHHHHHSCCGGGSBHHHHCHHHHHHH
T ss_pred CCHHHHHHHhHhhh---ccCcccccccCCCCccHHHHHHHH-cCHHHHHHHHHHHHccccCCChHHhhHHHHhHHHHHHH
Confidence 56667777643322 11111 01124679999999998 8999999999999998888999999998764432211
Q ss_pred --------------hhcc---------------CCceeeeecCCCcccchHHHHHHHHHcC-CEEEecceeeEEEecCCC
Q 018523 79 --------------LQEK---------------HGSKMAFLDGNPPERLCLPIVEHIQSLG-GEVRLNSRVQKIELNDDG 128 (354)
Q Consensus 79 --------------~~~~---------------~g~~~~~~~Gg~~~~l~~~l~~~l~~~g-~~i~~~~~V~~I~~~~~g 128 (354)
+... ....+.+++||+ ++|+++|++.+ + ++|++|++|++|..++++
T Consensus 198 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~-~~l~~~l~~~l---~~~~i~~~~~V~~I~~~~~~ 273 (504)
T 1sez_A 198 KRFGSVILGAIRSKLSPKNEKKQGPPKTSANKKRQRGSFSFLGGM-QTLTDAICKDL---REDELRLNSRVLELSCSCTE 273 (504)
T ss_dssp HHTSCHHHHHHHHTTC----------CCCSCCSTTCSCBEETTCT-HHHHHHHHTTS---CTTTEETTCCEEEEEEECSS
T ss_pred HHhCCHHHHHHHhhhcccccccccccchhhccccCCceEeeCcHH-HHHHHHHHhhc---ccceEEcCCeEEEEEecCCC
Confidence 1100 011256778997 78999998644 5 799999999999986555
Q ss_pred C-----EEEEEEc--CC---eEEEcCEEEEccChhhHhhhCCc---chhhhHHHHHhhccCCccEEEEEEEecccccc-c
Q 018523 129 T-----VKNFLLT--NG---NVIDGDAYVFATPVDILKLQLPE---NWKEMAYFKRLEKLVGVPVINIHIWFDRKLKN-T 194 (354)
Q Consensus 129 ~-----v~~V~~~--~g---~~~~ad~VI~a~p~~~l~~ll~~---~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~-~ 194 (354)
. + .|++. +| ++++||+||+|+|++.+.+++.+ ...+.. .+.+++|.++.++++.|++++|. .
T Consensus 274 ~~~~~~~-~v~~~~~~g~~~~~~~ad~VI~a~p~~~l~~ll~~~~~~~~~~~---~l~~~~~~~~~~v~l~~~~~~~~~~ 349 (504)
T 1sez_A 274 DSAIDSW-SIISASPHKRQSEEESFDAVIMTAPLCDVKSMKIAKRGNPFLLN---FIPEVDYVPLSVVITTFKRENVKYP 349 (504)
T ss_dssp SSSSCEE-EEEEBCSSSSCBCCCEESEEEECSCHHHHHTSEEESSSSBCCCT---TSCCCCEEEEEEEEEEEEGGGBSSC
T ss_pred CcccceE-EEEEcCCCCccceeEECCEEEECCCHHHHHHHhhcccCCcccHH---HHhcCCCCceEEEEEEEchhhcCCC
Confidence 2 3 46664 45 57899999999999999998731 101111 15667788899999999998774 2
Q ss_pred cC--ceeeccC------cccchhcccccccccccCCCCcEEEEEe-c-CCCCCCCCChHHHHHHHHHHHHHhCCCCcccc
Q 018523 195 YD--HLLFSRS------SLLSVYADMSLTCKEYYNPNQSMLELVF-A-PAEEWISCSDSEIIDATMKELAKLFPDEISAD 264 (354)
Q Consensus 195 ~~--~~~~~~~------~~~~~~~~~s~~~~~~~~~g~~~l~~~~-~-~~~~~~~~~~ee~~~~~~~~l~~~~p~~~~~~ 264 (354)
.. ++++++. .+.+++. .+...+..+|++.+++..+. . ....|..++++++++.++++|++++|...
T Consensus 350 ~~~~~~l~~~~~~~~g~~~~~~~~-~s~~~~~~~p~g~~~l~~~~~g~~~~~~~~~~~ee~~~~v~~~L~~~~g~~~--- 425 (504)
T 1sez_A 350 LEGFGVLVPSKEQQHGLKTLGTLF-SSMMFPDRAPNNVYLYTTFVGGSRNRELAKASRTELKEIVTSDLKQLLGAEG--- 425 (504)
T ss_dssp CCSSEEECCGGGGGGTCCSSEEEE-HHHHCGGGSCTTEEEEEEEEESTTCGGGTTCCHHHHHHHHHHHHHHHHCBCS---
T ss_pred CCceEEEcCCCCCCCCCccceEEe-eccccCCcCCCCCEEEEEEeCCCCcccccCCCHHHHHHHHHHHHHHHhCCCC---
Confidence 21 2333221 1122211 11123344566666665433 2 33467778999999999999999998632
Q ss_pred ccccceeEEEEEEeCCCccccCCCCCCCC---CCCCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHHHhhh
Q 018523 265 QSKAKIVKYHVVKTPRSVYKTIPNCEPCR---PLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVL 338 (354)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~~~~~ 338 (354)
.+....+.+|+++.+.+.+|+.... +...++++||||||+++.+ .+|++|+.||.+||++|++.++.
T Consensus 426 ----~p~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~~~~~~l~~aG~~~~g---~~v~gai~sG~~aA~~il~~l~~ 495 (504)
T 1sez_A 426 ----EPTYVNHLYWSKAFPLYGHNYDSVLDAIDKMEKNLPGLFYAGNHRGG---LSVGKALSSGCNAADLVISYLES 495 (504)
T ss_dssp ----CCSSEEEEEEEEEEECCCTTHHHHHHHHHHHHHHSTTEEECCSSSSC---SSHHHHHHHHHHHHHHHHHHHSS
T ss_pred ----CCeEEEEeECCCCCCccCcCHHHHHHHHHHHHHhCCCEEEEeecCCC---CCHHHHHHHHHHHHHHHHHHHhh
Confidence 3456677888887777777742111 1223467899999999874 68999999999999999988754
No 11
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.94 E-value=8.9e-26 Score=217.02 Aligned_cols=289 Identities=19% Similarity=0.199 Sum_probs=165.6
Q ss_pred CCHHHHHHHcCCChHHHHHHHHHHHhhhccCCcccccHHHHHHHHHHHhhccCCceeeeecCCCcccchHHHHHHHHHcC
Q 018523 31 LTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLG 110 (354)
Q Consensus 31 ~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~~~~~~~~~~g~~~~~~~Gg~~~~l~~~l~~~l~~~g 110 (354)
.|+.+++.++ +.++.++.+++..... .+.+|.+.++.+.+.. .+.... ...||+||+ ++|+++|++.++++|
T Consensus 164 ~~~~~~~~~~-~~~~~l~~~l~~~~~~-~g~~p~~~~~~~~~~~---~~~~~~--G~~~p~GG~-~~l~~aL~~~~~~~G 235 (501)
T 4dgk_A 164 RSVYSKVASY-IEDEHLRQAFSFHSLL-VGGNPFATSSIYTLIH---ALEREW--GVWFPRGGT-GALVQGMIKLFQDLG 235 (501)
T ss_dssp HHHHHHHHTT-CCCHHHHHHHHHHHHH-HHSCC--CCCTHHHHH---HHHSCC--CEEEETTHH-HHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHH-hccHHHHhhhhhhhcc-cCCCcchhhhhhhhhh---hhhccC--CeEEeCCCC-cchHHHHHHHHHHhC
Confidence 3677888887 7777777777655433 3466666666554322 122222 356899998 899999999999999
Q ss_pred CEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhhH-hhhCCcchhhhHHHHHhhccCCc-cEEEEEEEec
Q 018523 111 GEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDIL-KLQLPENWKEMAYFKRLEKLVGV-PVINIHIWFD 188 (354)
Q Consensus 111 ~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~l-~~ll~~~~~~~~~~~~~~~~~~~-~~~~v~l~~~ 188 (354)
++|++|++|++|..+ ++++++|++.||+++.||+||++++++.+ ..|++....+......+.+.++. +.+++++.++
T Consensus 236 g~I~~~~~V~~I~~~-~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~ 314 (501)
T 4dgk_A 236 GEVVLNARVSHMETT-GNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLSQHPAAVKQSNKLQTKRMSNSLFVLYFGLN 314 (501)
T ss_dssp CEEECSCCEEEEEEE-TTEEEEEEETTSCEEECSCEEECCC---------------------------CCEEEEEEEEES
T ss_pred CceeeecceeEEEee-CCeEEEEEecCCcEEEcCEEEECCCHHHHHHHhccccccchhhhhhhhccccCCceeEEEeccc
Confidence 999999999999985 66788899999999999999999987665 45676543333444556666654 6788999998
Q ss_pred ccccc-ccCceeeccCc---c------------cchh-cccccccccccCCCCcEEEEE-ecCCCCCCCCC----hHHHH
Q 018523 189 RKLKN-TYDHLLFSRSS---L------------LSVY-ADMSLTCKEYYNPNQSMLELV-FAPAEEWISCS----DSEII 246 (354)
Q Consensus 189 ~~~~~-~~~~~~~~~~~---~------------~~~~-~~~s~~~~~~~~~g~~~l~~~-~~~~~~~~~~~----~ee~~ 246 (354)
.+... ..+.+++..+. . ..++ ..+|..+++++|+|++.+.++ ..+...+.+.+ ++++.
T Consensus 315 ~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~dp~~ap~G~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 394 (501)
T 4dgk_A 315 HHHDQLAHHTVCFGPRYRELIDEIFNHDGLAEDFSLYLHAPCVTDSSLAPEGCGSYYVLAPVPHLGTANLDWTVEGPKLR 394 (501)
T ss_dssp SCCTTSCSEEEEEECC-------------CCCEEEEEEECGGGTCGGGSSTTCEEEEEEEEECCTTTSCCCHHHHHHHHH
T ss_pred CCccccccceeccccchhhhccccccccccccCCceecccCCCCCCCcCCCCCceEEEEEecCccccccccHHHHHHHHH
Confidence 77542 22233332110 0 0111 123345677889888766543 34433333322 46677
Q ss_pred HHHHHHHHHh-CCCCccccccccceeEEEEEEeCCC-----------ccccCC--CC-CCCCCCC-CCCCCceEEeeccc
Q 018523 247 DATMKELAKL-FPDEISADQSKAKIVKYHVVKTPRS-----------VYKTIP--NC-EPCRPLQ-RSPVEGFYLAGDYT 310 (354)
Q Consensus 247 ~~~~~~l~~~-~p~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~--g~-~~~~~~~-~~~~~~L~~aG~~~ 310 (354)
+++++.|++. +|++++ .++..+ +.+|.. .|...+ .+ ...||.. .+|++|||+||+++
T Consensus 395 ~~vl~~l~~~~~P~~~~------~i~~~~-~~tP~~~~~~~~~~~G~~~g~~~~~~q~~~~RP~~~~t~i~gLyl~G~~t 467 (501)
T 4dgk_A 395 DRIFAYLEQHYMPGLRS------QLVTHR-MFTPFDFRDQLNAYHGSAFSVEPVLTQSAWFRPHNRDKTITNLYLVGAGT 467 (501)
T ss_dssp HHHHHHHHHHTCTTHHH------HEEEEE-EECTTTTC------------------------------CCTTEEECCCH-
T ss_pred HHHHHHHHHhhCCChHH------ceEEEE-ECCHHHHHHHcCCCCccccChhcchhhccccCCCCCCCCCCCEEEECCCC
Confidence 8889999875 588753 333333 333321 122222 12 2245644 47899999999999
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHHHhh
Q 018523 311 KQKYLASMEGAVLSGKLCAQAIVQDYV 337 (354)
Q Consensus 311 ~~~~~~~~~gAi~sG~~aa~~il~~~~ 337 (354)
+++ ++++||+.||+.||++|++++.
T Consensus 468 ~pG--~Gv~ga~~SG~~aA~~il~dL~ 492 (501)
T 4dgk_A 468 HPG--AGIPGVIGSAKATAGLMLEDLI 492 (501)
T ss_dssp -------HHHHHHHHHHHHHHHHHHHC
T ss_pred CCc--ccHHHHHHHHHHHHHHHHHHhc
Confidence 987 7999999999999999999873
No 12
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.92 E-value=1.1e-24 Score=207.91 Aligned_cols=297 Identities=16% Similarity=0.171 Sum_probs=194.1
Q ss_pred cccCCCHHH--HHHHcCC--ChHHHHHHHHHHHh-hhccCCcccccHHHHHHHHHHHhhccCCceeeeecCCCcccchHH
Q 018523 27 AQDGLTVQE--WMRKQGV--PDRVTTEVFIAMSK-ALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLP 101 (354)
Q Consensus 27 ~~d~~s~~~--~l~~~g~--~~~~~~~~~~~~~~-~~~~~~~~~~sa~~~~~~~~~~~~~~~g~~~~~~~Gg~~~~l~~~ 101 (354)
..+++|+.+ ++.+... .....+.+++++.. ..++.+++..|+..+... ..+.....+..+..+.||+ ++|+++
T Consensus 134 ~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~-~~~~~~~~~~~~~~~~gG~-~~l~~~ 211 (472)
T 1b37_A 134 GRDDMSILAMQRLNEHQPNGPATPVDMVVDYYKFDYEFAEPPRVTSLQNTVPL-ATFSDFGDDVYFVADQRGY-EAVVYY 211 (472)
T ss_dssp CTTCCBHHHHHHHHHTSSSSCCSHHHHHHHHHHTHHHHSSCGGGBBSTTTSSC-HHHHHHCSEEEEECCTTCT-THHHHH
T ss_pred cchhhhHHHHHHHhhhcccccccHHHHHHHHHHHhhhhcccccccchhhcccc-ccccccCCceeeeecCCcH-HHHHHH
Confidence 357788765 6665421 22234557777663 334567777776433210 1111111112233447887 799999
Q ss_pred HHHHHHHc--------CCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhhHhhhCCc--chhhhHHHHH
Q 018523 102 IVEHIQSL--------GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPE--NWKEMAYFKR 171 (354)
Q Consensus 102 l~~~l~~~--------g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~l~~ll~~--~~~~~~~~~~ 171 (354)
|++.+.+. |++|+++++|++|..+++ .++ |++.+|++++||+||+|+|+..+..++.. ...+....++
T Consensus 212 l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~-~v~-v~~~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~Lp~~~~~a 289 (472)
T 1b37_A 212 LAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPG-GVT-VKTEDNSVYSADYVMVSASLGVLQSDLIQFKPKLPTWKVRA 289 (472)
T ss_dssp HHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSS-CEE-EEETTSCEEEESEEEECSCHHHHHTTSSEEESCCCHHHHHH
T ss_pred HHHhccccccccccccccEEEcCCEEEEEEEcCC-cEE-EEECCCCEEEcCEEEEecCHHHhccCCeeECCCCCHHHHHH
Confidence 99877654 689999999999998644 464 88888989999999999999999886421 1124456677
Q ss_pred hhccCCccEEEEEEEeccccccc-cC-ce-eeccCc--ccchhcccccccccccCCCCcEEEEEec--CCCCCCCCChHH
Q 018523 172 LEKLVGVPVINIHIWFDRKLKNT-YD-HL-LFSRSS--LLSVYADMSLTCKEYYNPNQSMLELVFA--PAEEWISCSDSE 244 (354)
Q Consensus 172 ~~~~~~~~~~~v~l~~~~~~~~~-~~-~~-~~~~~~--~~~~~~~~s~~~~~~~~~g~~~l~~~~~--~~~~~~~~~~ee 244 (354)
++++.+.+..|+++.|++++|.. .+ .+ ++.+.. ...++... ++. .| +.+++.+.+. .++.|..+++++
T Consensus 290 i~~~~~~~~~kv~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~p-~~~~l~~~~~~~~a~~~~~~~~~e 364 (472)
T 1b37_A 290 IYQFDMAVYTKIFLKFPRKFWPEGKGREFFLYASSRRGYYGVWQEF---EKQ-YP-DANVLLVTVTDEESRRIEQQSDEQ 364 (472)
T ss_dssp HHHSEEECEEEEEEECSSCCSCCSTTCSEEEECCSSTTSSCEEEEC---TTT-ST-TCCEEEEEEEHHHHHHHHTSCHHH
T ss_pred HHhcCCcceeEEEEECCCcCCCCCCCcceEEecccCCccceeeecc---cCC-CC-CCCEEEEEechHHHHHHHhCCHHH
Confidence 88888889999999999999853 11 12 222211 11111111 111 23 4455543332 233566789999
Q ss_pred HHHHHHHHHHHhCCCCccccccccceeEEEEEEeC-----CCccc-cCCCCCC-CCCCCCCCCCceEEeeccccCCCCCc
Q 018523 245 IIDATMKELAKLFPDEISADQSKAKIVKYHVVKTP-----RSVYK-TIPNCEP-CRPLQRSPVEGFYLAGDYTKQKYLAS 317 (354)
Q Consensus 245 ~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~g~~~-~~~~~~~~~~~L~~aG~~~~~~~~~~ 317 (354)
+++.+++.|++++|+... .+++...+.+|. .+.|. ..||+.. ..+.+++|++||||||+++++.|+++
T Consensus 365 ~~~~~l~~L~~~~Pg~~~-----~~~~~~~~~~W~~~~~~~G~~~~~~~g~~~~~~~~l~~p~~~l~fAG~~t~~~~~g~ 439 (472)
T 1b37_A 365 TKAEIMQVLRKMFPGKDV-----PDATDILVPRWWSDRFYKGTFSNWPVGVNRYEYDQLRAPVGRVYFTGEHTSEHYNGY 439 (472)
T ss_dssp HHHHHHHHHHHHCTTSCC-----CCCSEEECCCTTTCTTTSSSEEECBTTCCHHHHHHHHCCBTTEEECSGGGCTTTTTS
T ss_pred HHHHHHHHHHHHcCCCCC-----CCCceEEecccCCCCCCCcccCCCCCCCChhHHHHHhccCCcEEEeecccCCCCCCc
Confidence 999999999999987531 134455556662 23344 3456531 23456788999999999999877789
Q ss_pred hhHHHHHHHHHHHHHHHHhh
Q 018523 318 MEGAVLSGKLCAQAIVQDYV 337 (354)
Q Consensus 318 ~~gAi~sG~~aa~~il~~~~ 337 (354)
|+||+.||++||++|++.++
T Consensus 440 v~GA~~SG~~aA~~i~~~l~ 459 (472)
T 1b37_A 440 VHGAYLSGIDSAEILINCAQ 459 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998764
No 13
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.91 E-value=1e-24 Score=208.25 Aligned_cols=311 Identities=13% Similarity=0.099 Sum_probs=214.1
Q ss_pred CChHHHHHHhhhhhHHHhccccccccccCCCHHHHHHHcCCChHHHHHHHHHHHhhhccCCcccccHHHHHH--------
Q 018523 2 LTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILI-------- 73 (354)
Q Consensus 2 ls~~~k~~~~~~~~~~~~~~~~~~~~~d~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~-------- 73 (354)
|+..++.+++..++... ......++.|+.+|+.++ +++++++.+++|++.++|+.+++++|+.+++.
T Consensus 112 l~~~~~~~~~~~ll~~~----~~~~~~~~~s~~e~~~~~-~g~~~~~~~~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l~ 186 (484)
T 4dsg_A 112 LPEQDRKRCLDELVRSH----ARTYTEPPNNFEESFTRQ-FGEGIADIFMRPYNFKVWAVPPCLMSTEWVEERVAPVDLE 186 (484)
T ss_dssp SCHHHHHHHHHHHHHHH----HCCCSSCCSSHHHHHHHH-HHHHHCCCCCHHHHHHHHSSCGGGBCSSSCTTTSCCCCHH
T ss_pred CCHHHHHHHHHHHHHHH----hccCCCCCCCHHHHHHHH-hHHHHHHHHHHHHHhhhcCCCHHHhcHHHHhccccCCCHH
Confidence 34555665554444221 112345789999999998 99999999999999999999999999865332
Q ss_pred -HHHHHhhccC------Cceeeee-cCCCcccchHHHHHHHHHcCCEEEec--ceeeEEEecCCCCEEEEEEcCCeEEEc
Q 018523 74 -ALNRFLQEKH------GSKMAFL-DGNPPERLCLPIVEHIQSLGGEVRLN--SRVQKIELNDDGTVKNFLLTNGNVIDG 143 (354)
Q Consensus 74 -~~~~~~~~~~------g~~~~~~-~Gg~~~~l~~~l~~~l~~~g~~i~~~--~~V~~I~~~~~g~v~~V~~~~g~~~~a 143 (354)
.+...+..+. ...+.|| .||+ ++|+++|++.+.+ .+|+++ ++|++|..+ ++ +|++.+|+++.|
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~f~yp~~gG~-~~l~~~la~~l~~--~~i~~~~~~~V~~I~~~-~~---~v~~~~G~~~~a 259 (484)
T 4dsg_A 187 RIRRNIQENRDDLGWGPNATFRFPQRGGT-GIIYQAIKEKLPS--EKLTFNSGFQAIAIDAD-AK---TITFSNGEVVSY 259 (484)
T ss_dssp HHHHHHHHTCCCCCCSTTSEEEEESSSCT-HHHHHHHHHHSCG--GGEEECGGGCEEEEETT-TT---EEEETTSCEEEC
T ss_pred HHHHHHhhcccccCCCccceEEeecCCCH-HHHHHHHHhhhhh--CeEEECCCceeEEEEec-CC---EEEECCCCEEEC
Confidence 2223222211 1246677 5887 7999999977643 289999 569999974 44 255678888999
Q ss_pred CEEEEccChhhHhhhCCc--chhhhHHHHHhhccCCccEEEEEEEecccccc---ccCceeeccCc--ccchhccccccc
Q 018523 144 DAYVFATPVDILKLQLPE--NWKEMAYFKRLEKLVGVPVINIHIWFDRKLKN---TYDHLLFSRSS--LLSVYADMSLTC 216 (354)
Q Consensus 144 d~VI~a~p~~~l~~ll~~--~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~---~~~~~~~~~~~--~~~~~~~~s~~~ 216 (354)
|+||+|+|++.+.+++++ ...+....+.+.+++|.++.++++.|+++... +..++.+++.. ...+ ..+++..
T Consensus 260 d~VI~a~p~~~~~~ll~~~~~~~~~~~~~~l~~l~y~s~~~v~l~~~~~~~~~~~~~~~i~vp~~~~~~~ri-~~~s~~~ 338 (484)
T 4dsg_A 260 DYLISTVPFDNLLRMTKGTGFKGYDEWPAIADKMVYSSTNVIGIGVKGTPPPHLKTACWLYFPEDTSPFYRA-TVFSNYS 338 (484)
T ss_dssp SEEEECSCHHHHHHHEECSSCTTGGGHHHHHHHCCEEEEEEEEEEEESCCCGGGTTCCEEECCSTTCSCSEE-ECGGGTC
T ss_pred CEEEECCCHHHHHHHhhccCCCCCHHHHHHHhCCCcCceEEEEEEEcCCCcccCCCCeEEEEEcCCCeEEEE-EeecCCC
Confidence 999999999999998754 11234556678889999999999999876421 12334444322 2222 1234445
Q ss_pred ccccCCCCcEEEEEecCCCCCCCCChHHHHHHHHHHHHHhCCCCccccccccceeEEEEEEeCCCccccCCCCCC----C
Q 018523 217 KEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEP----C 292 (354)
Q Consensus 217 ~~~~~~g~~~l~~~~~~~~~~~~~~~ee~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~----~ 292 (354)
|+.+|++++++.+.++... ....+++++++.++++|.++..... ...+...++.+|+.+.|.+.+|... .
T Consensus 339 p~~ap~g~~~l~~e~~~~~-~~~~~d~~l~~~a~~~L~~~~~~~~-----~~~~~~~~v~r~~~~yP~y~~~~~~~~~~~ 412 (484)
T 4dsg_A 339 KYNVPEGHWSLMLEVSESK-YKPVNHSTLIEDCIVGCLASNLLLP-----EDLLVSKWHYRIEKGYPTPFIGRNNLLEKA 412 (484)
T ss_dssp GGGSCTTEEEEEEEEEEBT-TBCCCTTSHHHHHHHHHHHTTSCCT-----TCCEEEEEEEEEEEEEECCBTTHHHHHHHH
T ss_pred cccCCCCeEEEEEEEecCc-CCcCCHHHHHHHHHHHHHHcCCCCc-----cceEEEEEEEEeCccccCCCccHHHHHHHH
Confidence 6667777776655444223 3367899999999999999853221 1234556788999999999888521 1
Q ss_pred CCCCCCCCCceEEeeccccCCCC-CchhHHHHHHHHHHHHHH
Q 018523 293 RPLQRSPVEGFYLAGDYTKQKYL-ASMEGAVLSGKLCAQAIV 333 (354)
Q Consensus 293 ~~~~~~~~~~L~~aG~~~~~~~~-~~~~gAi~sG~~aa~~il 333 (354)
+..... . ||+++|.+....|. .+|+.|+.||..||++|+
T Consensus 413 ~~~l~~-~-~l~~~Gr~g~~~y~v~~~d~~i~sg~~aa~~i~ 452 (484)
T 4dsg_A 413 QPELMS-R-CIYSRGRFGAWRYEVGNQDHSFMQGVEAIDHVL 452 (484)
T ss_dssp HHHHHH-T-TEEECSTTTTCCGGGCSHHHHHHHHHHHHHHHT
T ss_pred HHHHHh-C-CcEeecCCcccccCCCChHHHHHHHHHHHHHHH
Confidence 222222 3 99999986665553 379999999999999998
No 14
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.90 E-value=2.7e-23 Score=200.21 Aligned_cols=292 Identities=10% Similarity=0.115 Sum_probs=202.5
Q ss_pred ccccCCCHHHHHHHcCCChHHHHHHHHHHHhhhccCCcccccHHHHHHHH---------HHHh-hcc-----CCceeee-
Q 018523 26 EAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIAL---------NRFL-QEK-----HGSKMAF- 89 (354)
Q Consensus 26 ~~~d~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~~---------~~~~-~~~-----~g~~~~~- 89 (354)
...+..|+.+|+.++ +++.+++.++.|+...+++.+++++|+.++...+ ...+ ... ....+.+
T Consensus 138 ~~~~~~s~~~~~~~~-~g~~l~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (513)
T 4gde_A 138 ANTKPKTFDEWIVRM-MGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFP 216 (513)
T ss_dssp CCSCCCSHHHHHHHH-HHHHHHHHTHHHHHHHHHSSCGGGBCSGGGCSSCCCCCHHHHHHHHHHTCCCCSCBTTBEEEEE
T ss_pred ccccccCHHHHHHHh-hhhhhhhhhcchhhhhhccCChHHhhHHHHHHhhcccchhhhhhhhhhcccccccccccceeec
Confidence 345678999999998 8999999999999999999999999987653211 1111 111 1122334
Q ss_pred ecCCCcccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhhHhhhCCcchhhhHHH
Q 018523 90 LDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYF 169 (354)
Q Consensus 90 ~~Gg~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~l~~ll~~~~~~~~~~ 169 (354)
++||+ ++|+++|++.|++.|++|+++++|++|..+ ++ .|++.+|+++.||+||+|+|++.+.+++++. ...
T Consensus 217 ~~gG~-~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~-~~---~v~~~~G~~~~ad~vI~t~P~~~l~~~l~~~----~~~ 287 (513)
T 4gde_A 217 ARGGT-GGIWIAVANTLPKEKTRFGEKGKVTKVNAN-NK---TVTLQDGTTIGYKKLVSTMAVDFLAEAMNDQ----ELV 287 (513)
T ss_dssp SSSHH-HHHHHHHHHTSCGGGEEESGGGCEEEEETT-TT---EEEETTSCEEEEEEEEECSCHHHHHHHTTCH----HHH
T ss_pred ccCCH-HHHHHHHHHHHHhcCeeeecceEEEEEEcc-CC---EEEEcCCCEEECCEEEECCCHHHHHHhcCch----hhH
Confidence 48997 899999999999999999999999999974 44 3678899999999999999999999998753 234
Q ss_pred HHhhccCCccEEEEEEEecccccc--ccCceee-ccC--cccchhcccccccccccCCC---------------------
Q 018523 170 KRLEKLVGVPVINIHIWFDRKLKN--TYDHLLF-SRS--SLLSVYADMSLTCKEYYNPN--------------------- 223 (354)
Q Consensus 170 ~~~~~~~~~~~~~v~l~~~~~~~~--~~~~~~~-~~~--~~~~~~~~~s~~~~~~~~~g--------------------- 223 (354)
.....++|.+..++++.++..... ....+++ .+. +...+. .+++..+...|++
T Consensus 288 ~~~~~l~y~~~~~v~l~~~~~~~~~~~~~~~~y~~~~~~~f~Ri~-~~~n~sp~~~p~~~~~~~~~~~~~~~~~~~~~~~ 366 (513)
T 4gde_A 288 GLTKQLFYSSTHVIGVGVRGSRPERIGDKCWLYFPEDNCPFYRAT-IFSNYSPYNQPEASAALPTMQLADGSRPQSTEAK 366 (513)
T ss_dssp HHHTTCCEEEEEEEEEEEESSCCTTTTTCCEEECCSTTCSCSEEE-CGGGTCGGGSCCTTCCEECCEETTSCCCSCCSEE
T ss_pred hhhhcccCCceEEEEEEEeccccccccccceeeccCCCCceeEEE-ecCCCCcccCCCCCceEEEEEeccCCCcccccCC
Confidence 456778899998999998765331 1112222 221 111110 1111111112211
Q ss_pred CcEEE-EEec-CCCCCCCCChHHHHHHHHHHHHHhCCCCccccccccceeEEEEEEeCCCccccCCCCCC----CCCCCC
Q 018523 224 QSMLE-LVFA-PAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEP----CRPLQR 297 (354)
Q Consensus 224 ~~~l~-~~~~-~~~~~~~~~~ee~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~----~~~~~~ 297 (354)
..++. +... ..+....++++++++.++++|.++.+... ..+++..++.+||++.|.+..|... .++.+.
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~de~l~~~~~~~L~~~~~i~~-----~~~i~~~~v~r~~~ayP~y~~~~~~~~~~~~~~l~ 441 (513)
T 4gde_A 367 EGPYWSIMLEVSESSMKPVNQETILADCIQGLVNTEMLKP-----TDEIVSTYHRRFDHGYPTPTLEREGTLTQILPKLQ 441 (513)
T ss_dssp CCCEEEEEEEEEEBTTBCCCTTTHHHHHHHHHHHTTSSCT-----TCEEEEEEEEEEEEEEECCBTTHHHHHHHHHHHHH
T ss_pred cceEEEEEecccchhccCCCHHHHHHHHHHHHHHhcCCCC-----ccceEEEEEEECCCeecccCHhHHHHHHHHHHHHh
Confidence 12222 2211 12344578999999999999999987543 2367888899999999888887521 222222
Q ss_pred CCCCceEEeeccccCCCC-CchhHHHHHHHHHHHHHHHH
Q 018523 298 SPVEGFYLAGDYTKQKYL-ASMEGAVLSGKLCAQAIVQD 335 (354)
Q Consensus 298 ~~~~~L~~aG~~~~~~~~-~~~~gAi~sG~~aa~~il~~ 335 (354)
. +|||++|......|. ++|++|+++|+.||++|+..
T Consensus 442 ~--~~l~~~GR~g~~~Y~~~n~D~a~~~g~~aa~~I~~g 478 (513)
T 4gde_A 442 D--KDIWSRGRFGSWRYEVGNQDHSFMLGVEAVDNIVNG 478 (513)
T ss_dssp H--TTEEECSTTTTCCGGGCSHHHHHHHHHHHHHHHHHC
T ss_pred h--cCcEEecCCcccCcCCCCHHHHHHHHHHHHHHHHcC
Confidence 2 599999976655553 57999999999999999973
No 15
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.90 E-value=1.1e-21 Score=184.97 Aligned_cols=273 Identities=14% Similarity=0.163 Sum_probs=186.3
Q ss_pred ccccCCCHHHHHHHcCCChHHHHHHHHHHHhhhccCCcccccHHHHHHHHHHH-------hhccCCceeeeecCCCcccc
Q 018523 26 EAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRF-------LQEKHGSKMAFLDGNPPERL 98 (354)
Q Consensus 26 ~~~d~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~~~~~-------~~~~~g~~~~~~~Gg~~~~l 98 (354)
..++ +|+.+|+.+.+.++. ...++.++....++.+++++|+..++..+... +.. . .. .+.+|+ ..+
T Consensus 137 ~~~d-~s~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~--~-~~-~~~~g~-~~l 209 (431)
T 3k7m_X 137 EDLD-IPLNEYVDKLDLPPV-SRQFLLAWAWNMLGQPADQASALWMLQLVAAHHYSILGVVLS--L-DE-VFSNGS-ADL 209 (431)
T ss_dssp GGGC-SBHHHHHHHHTCCHH-HHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSCHHHHHHT--C-CE-EETTCT-HHH
T ss_pred hhhc-CCHHHHHHhcCCCHH-HHHHHHHHHHHhcCCChhhhhHHHHHHHHHhcCCccceeecc--h-hh-hcCCcH-HHH
Confidence 3466 999999999866554 55578888887888899999999887665432 111 1 12 567776 566
Q ss_pred hHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhhHhhhC-CcchhhhHHHHHhhccCC
Q 018523 99 CLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQL-PENWKEMAYFKRLEKLVG 177 (354)
Q Consensus 99 ~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~l~~ll-~~~~~~~~~~~~~~~~~~ 177 (354)
++.++ ++.| +|+++++|++|+.++++ + .|++.+|++++||+||+|+|++.+..+. .+. .+....+++..+.+
T Consensus 210 ~~~~~---~~~g-~i~~~~~V~~i~~~~~~-v-~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~-l~~~~~~~~~~~~~ 282 (431)
T 3k7m_X 210 VDAMS---QEIP-EIRLQTVVTGIDQSGDV-V-NVTVKDGHAFQAHSVIVATPMNTWRRIVFTPA-LPERRRSVIEEGHG 282 (431)
T ss_dssp HHHHH---TTCS-CEESSCCEEEEECSSSS-E-EEEETTSCCEEEEEEEECSCGGGGGGSEEESC-CCHHHHHHHHHCCC
T ss_pred HHHHH---hhCC-ceEeCCEEEEEEEcCCe-E-EEEECCCCEEEeCEEEEecCcchHhheeeCCC-CCHHHHHHHHhCCC
Confidence 66665 3446 99999999999985444 6 4888888889999999999999999873 221 23345666777778
Q ss_pred ccEEEEEEEeccccccccCceeeccCcccchhcccccccccccCCCCcEEE-EEecCCCCCCCCChHHHHHHHHHHHHHh
Q 018523 178 VPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLE-LVFAPAEEWISCSDSEIIDATMKELAKL 256 (354)
Q Consensus 178 ~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~g~~~l~-~~~~~~~~~~~~~~ee~~~~~~~~l~~~ 256 (354)
....|+.+.|+++++. +.-.+++....+.+.+. ...+..++. +..... +...+. +.+.+.|+++
T Consensus 283 ~~~~kv~~~~~~~~~~----i~~~~d~~~~~~~~~~~-----~~~~~~~l~~~~~g~~--~~~~~~----~~~~~~l~~~ 347 (431)
T 3k7m_X 283 GQGLKILIHVRGAEAG----IECVGDGIFPTLYDYCE-----VSESERLLVAFTDSGS--FDPTDI----GAVKDAVLYY 347 (431)
T ss_dssp CCEEEEEEEEESCCTT----EEEEBSSSSSEEEEEEE-----CSSSEEEEEEEEETTT--CCTTCH----HHHHHHHHHH
T ss_pred cceEEEEEEECCCCcC----ceEcCCCCEEEEEeCcC-----CCCCCeEEEEEecccc--CCCCCH----HHHHHHHHHh
Confidence 8889999999988752 22123332222111111 112334443 333322 322232 2466788889
Q ss_pred CCCCccccccccceeEEEEEEeCC-----Cccc-cCCCC-CCCCCCCCCCCCceEEeeccccCCCCCchhHHHHHHHHHH
Q 018523 257 FPDEISADQSKAKIVKYHVVKTPR-----SVYK-TIPNC-EPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCA 329 (354)
Q Consensus 257 ~p~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~g~-~~~~~~~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa 329 (354)
+|+.. ++.....+|.. +.|. ..||+ ....+.++.|.++|||||++++..|+++|+||+.||.+||
T Consensus 348 ~~~~~--------~~~~~~~~W~~d~~~~G~~~~~~~g~~~~~~~~l~~p~g~~~fAGe~t~~~~~g~~~GA~~sg~raa 419 (431)
T 3k7m_X 348 LPEVE--------VLGIDYHDWIADPLFEGPWVAPRVGQFSRVHKELGEPAGRIHFVGSDVSLEFPGYIEGALETAECAV 419 (431)
T ss_dssp CTTCE--------EEEEECCCTTTCTTTSSSSCCCCTTTTTTSSGGGGSCBTTEEECSGGGCSSSTTSHHHHHHHHHHHH
T ss_pred cCCCC--------ccEeEecccCCCCCCCCCCCCcCCCCCcccHHHHhCCCCcEEEEehhhhccCCeEehHHHHHHHHHH
Confidence 98642 45555566632 4454 34675 3456777889999999999999888899999999999999
Q ss_pred HHHHHH
Q 018523 330 QAIVQD 335 (354)
Q Consensus 330 ~~il~~ 335 (354)
++|+..
T Consensus 420 ~~i~~~ 425 (431)
T 3k7m_X 420 NAILHS 425 (431)
T ss_dssp HHHHHC
T ss_pred HHHHhh
Confidence 999864
No 16
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.89 E-value=3.2e-22 Score=182.86 Aligned_cols=227 Identities=14% Similarity=0.114 Sum_probs=162.8
Q ss_pred eeecCCCcccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhhHhhhCCcc--hhh
Q 018523 88 AFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPEN--WKE 165 (354)
Q Consensus 88 ~~~~Gg~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~l~~ll~~~--~~~ 165 (354)
....+|+ +.+.+.+++.+ |++|+++++|++|..++++ + .|++.+|++++||+||+|+|++.+.+|+++. ..+
T Consensus 105 ~~~~~g~-~~l~~~l~~~~---g~~i~~~~~V~~i~~~~~~-~-~v~~~~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l~ 178 (342)
T 3qj4_A 105 FVAPQGI-SSIIKHYLKES---GAEVYFRHRVTQINLRDDK-W-EVSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLIS 178 (342)
T ss_dssp EECTTCT-THHHHHHHHHH---TCEEESSCCEEEEEECSSS-E-EEEESSSCCEEESEEEECSCHHHHTTCBSTHHHHSC
T ss_pred eecCCCH-HHHHHHHHHhc---CCEEEeCCEEEEEEEcCCE-E-EEEECCCCEEEcCEEEECCCHHHHHHHhcccccccC
Confidence 3447777 78888888655 8999999999999986554 5 3888888778999999999999999998752 123
Q ss_pred hHHHHHhhccCCccEEEEEEEecccccc--ccCceeeccCc-ccchhccccccccccc-CCCCcEEEEEec--CCCCCCC
Q 018523 166 MAYFKRLEKLVGVPVINIHIWFDRKLKN--TYDHLLFSRSS-LLSVYADMSLTCKEYY-NPNQSMLELVFA--PAEEWIS 239 (354)
Q Consensus 166 ~~~~~~~~~~~~~~~~~v~l~~~~~~~~--~~~~~~~~~~~-~~~~~~~~s~~~~~~~-~~g~~~l~~~~~--~~~~~~~ 239 (354)
....+.+.+++|.++.++++.|++++|. ++.++.+.+.+ +..++.+.+. +... +++..++.+..+ .++++.+
T Consensus 179 ~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~k--~~r~~~~~~~~~v~~~~~~~~~~~~~ 256 (342)
T 3qj4_A 179 ECQRQQLEAVSYSSRYALGLFYEAGTKIDVPWAGQYITSNPCIRFVSIDNKK--RNIESSEIGPSLVIHTTVPFGVTYLE 256 (342)
T ss_dssp HHHHHHHHTCCBCCEEEEEEECSSCC--CCSCSEEECSSCSSEEEEEEHHHH--TTCCCC-CCCEEEEEECHHHHHHTTT
T ss_pred HHHHHHHhcCCccccEEEEEEECCCCccCCceeeEEccCCcceEEEEccccC--CCCCCCCCCceEEEECCHHHHHHhhc
Confidence 3457778999999999999999987653 34455555444 3323222221 1111 222334433322 2345677
Q ss_pred CChHHHHHHHHHHHHHhCCCCccccccccceeEEEEEEeCCCccccCCCCCCCCCC-CC-CCCCceEEeeccccCCCCCc
Q 018523 240 CSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPL-QR-SPVEGFYLAGDYTKQKYLAS 317 (354)
Q Consensus 240 ~~~ee~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~-~~~~~L~~aG~~~~~~~~~~ 317 (354)
++++++++.++++|.+++|... ++....+++|+++.+.+.... ++. .. ...++|++||||+.+ ++
T Consensus 257 ~~~~~~~~~~~~~l~~~~g~~~-------~p~~~~v~rW~~a~p~~~~~~---~~~~~~~~~~~~l~laGd~~~g---~~ 323 (342)
T 3qj4_A 257 HSIEDVQELVFQQLENILPGLP-------QPIATKCQKWRHSQVTNAAAN---CPGQMTLHHKPFLACGGDGFTQ---SN 323 (342)
T ss_dssp SCHHHHHHHHHHHHHHHSCSCC-------CCSEEEEEEETTCSBSSCCSS---SCSCEEEETTTEEEECSGGGSC---SS
T ss_pred CCHHHHHHHHHHHHHHhccCCC-------CCceeeeccccccccccccCC---CcceeEecCCccEEEEccccCC---CC
Confidence 8999999999999999998543 467788999999987654311 222 22 356899999999986 69
Q ss_pred hhHHHHHHHHHHHHHHHH
Q 018523 318 MEGAVLSGKLCAQAIVQD 335 (354)
Q Consensus 318 ~~gAi~sG~~aa~~il~~ 335 (354)
+|+|+.||.++|++|+..
T Consensus 324 v~~ai~sg~~aa~~i~~~ 341 (342)
T 3qj4_A 324 FDGCITSALCVLEALKNY 341 (342)
T ss_dssp HHHHHHHHHHHHHHHTTC
T ss_pred ccHHHHHHHHHHHHHHhh
Confidence 999999999999999764
No 17
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.89 E-value=2.7e-22 Score=192.57 Aligned_cols=290 Identities=14% Similarity=0.091 Sum_probs=186.4
Q ss_pred ccccCCCHHHHHHHcC-CChHHHHHHHHHHHhhhccCCcccccHHHHHHHHHHHhhccCCceeeeecCCCcccchHHHHH
Q 018523 26 EAQDGLTVQEWMRKQG-VPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVE 104 (354)
Q Consensus 26 ~~~d~~s~~~~l~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~~~~~~~~~~g~~~~~~~Gg~~~~l~~~l~~ 104 (354)
..++++|+.+|+.+.+ ++++.++. +..+.... .....+....+.....+ . .+..+.++.||+ ++|+++|++
T Consensus 178 ~~~~~~s~~~~l~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~-~--~~~~~~~~~gG~-~~l~~~l~~ 249 (498)
T 2iid_A 178 NKYDTYSTKEYLIKEGDLSPGAVDM-IGDLLNED---SGYYVSFIESLKHDDIF-A--YEKRFDEIVDGM-DKLPTAMYR 249 (498)
T ss_dssp HHHTTSBHHHHHHHTSCCCHHHHHH-HHHHTTCG---GGTTSBHHHHHHHHHHH-T--TCCCEEEETTCT-THHHHHHHH
T ss_pred HHhhhhhHHHHHHHccCCCHHHHHH-HHHhcCcc---cchhHHHHHHHHHHhcc-c--cCcceEEeCCcH-HHHHHHHHH
Confidence 3468899999999875 56665553 32222110 00112222222211111 1 123466789997 799999997
Q ss_pred HHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCe----EEEcCEEEEccChhhHhhhC--CcchhhhHHHHHhhccCCc
Q 018523 105 HIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN----VIDGDAYVFATPVDILKLQL--PENWKEMAYFKRLEKLVGV 178 (354)
Q Consensus 105 ~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~----~~~ad~VI~a~p~~~l~~ll--~~~~~~~~~~~~~~~~~~~ 178 (354)
.+. .+|+++++|++|..+++ .+ .|++.+|+ +++||+||+|+|+..+..+. |+ .|....+++++++|.
T Consensus 250 ~l~---~~i~~~~~V~~I~~~~~-~v-~v~~~~~~~~~~~~~ad~vI~t~p~~~~~~i~f~p~--Lp~~~~~ai~~l~~~ 322 (498)
T 2iid_A 250 DIQ---DKVHFNAQVIKIQQNDQ-KV-TVVYETLSKETPSVTADYVIVCTTSRAVRLIKFNPP--LLPKKAHALRSVHYR 322 (498)
T ss_dssp HTG---GGEESSCEEEEEEECSS-CE-EEEEECSSSCCCEEEESEEEECSCHHHHTTSEEESC--CCHHHHHHHHHCCEE
T ss_pred hcc---cccccCCEEEEEEECCC-eE-EEEEecCCcccceEEeCEEEECCChHHHhheecCCC--CCHHHHHHHHhCCCc
Confidence 764 38999999999998644 46 47777664 47999999999999988763 43 344567778999999
Q ss_pred cEEEEEEEeccccccc---cCceeeccCcccchhcccccccccccCCCCcEEEE-Eec-CCCCCCCCChHHHHHHHHHHH
Q 018523 179 PVINIHIWFDRKLKNT---YDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLEL-VFA-PAEEWISCSDSEIIDATMKEL 253 (354)
Q Consensus 179 ~~~~v~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~s~~~~~~~~~g~~~l~~-~~~-~~~~~~~~~~ee~~~~~~~~l 253 (354)
+..|+++.|++++|.. .++..+.+.+...++. .+. ..|.+..++.. +.. .+..|..++++++++.++++|
T Consensus 323 ~~~kv~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~-~s~----~~p~g~~~L~~~~~g~~a~~~~~~~~~~~~~~~l~~L 397 (498)
T 2iid_A 323 SGTKIFLTCTTKFWEDDGIHGGKSTTDLPSRFIYY-PNH----NFTNGVGVIIAYGIGDDANFFQALDFKDCADIVFNDL 397 (498)
T ss_dssp CEEEEEEEESSCGGGGGTCCSSEEEESSTTCEEEC-CSS----CCTTSCEEEEEEEEHHHHHTTTTSCHHHHHHHHHHHH
T ss_pred ceeEEEEEeCCCCccCCCccCCcccCCCCcceEEE-CCC----CCCCCCcEEEEEeCCccHhhhhcCCHHHHHHHHHHHH
Confidence 9999999999999853 1233333334332221 111 12445555543 333 245677789999999999999
Q ss_pred HHhCCCCccccccccceeEEEEEEeCC-----Cccc-cCCCCC-CCCCCCCCCCCceEEeeccccCCCCCchhHHHHHHH
Q 018523 254 AKLFPDEISADQSKAKIVKYHVVKTPR-----SVYK-TIPNCE-PCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGK 326 (354)
Q Consensus 254 ~~~~p~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~g~~-~~~~~~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~ 326 (354)
+++++.... .. ........+.+|.. +.|. ..|+.. ...+..++|.+||||||++++..+ ++|+||+.||.
T Consensus 398 ~~~~g~~~~-~~-~~~~~~~~~~~W~~~p~~~G~~~~~~~~~~~~~~~~l~~p~~~l~fAGe~t~~~~-g~~~GAi~SG~ 474 (498)
T 2iid_A 398 SLIHQLPKK-DI-QSFCYPSVIQKWSLDKYAMGGITTFTPYQFQHFSDPLTASQGRIYFAGEYTAQAH-GWIDSTIKSGL 474 (498)
T ss_dssp HHHHTCCHH-HH-HHHEEEEEEEEGGGCTTTCSSEECCCTTHHHHHHHHHHCCBTTEEECSGGGSSSS-SCHHHHHHHHH
T ss_pred HHHcCCChh-hh-hhhcCccEEEecCCCCCCCceeeecCCcchHHHHHHHhCCCCcEEEEEcccccCC-cCHHHHHHHHH
Confidence 999974321 00 00112244566753 2232 233421 122334567899999999997654 79999999999
Q ss_pred HHHHHHHHHhhh
Q 018523 327 LCAQAIVQDYVL 338 (354)
Q Consensus 327 ~aa~~il~~~~~ 338 (354)
+||++|++.++.
T Consensus 475 raA~~i~~~l~~ 486 (498)
T 2iid_A 475 RAARDVNLASEN 486 (498)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHhcC
Confidence 999999998864
No 18
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.88 E-value=2.3e-22 Score=192.65 Aligned_cols=236 Identities=14% Similarity=0.124 Sum_probs=163.2
Q ss_pred eeeeecCCCcccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCC---eEEEcCEEEEccChhhHhhhCCcc
Q 018523 86 KMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG---NVIDGDAYVFATPVDILKLQLPEN 162 (354)
Q Consensus 86 ~~~~~~Gg~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g---~~~~ad~VI~a~p~~~l~~ll~~~ 162 (354)
.+.+++||+ ++|+++|++.+.+ ++|+++++|++|..+++ .++ |++.+| ++++||+||+|+|+..+..+..+
T Consensus 230 ~~~~~~gG~-~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~-~v~-v~~~~g~~~~~~~ad~vI~a~p~~~l~~l~~~- 303 (489)
T 2jae_A 230 MMFTPVGGM-DRIYYAFQDRIGT--DNIVFGAEVTSMKNVSE-GVT-VEYTAGGSKKSITADYAICTIPPHLVGRLQNN- 303 (489)
T ss_dssp SEEEETTCT-THHHHHHHHHHCG--GGEETTCEEEEEEEETT-EEE-EEEEETTEEEEEEESEEEECSCHHHHTTSEEC-
T ss_pred cEEeecCCH-HHHHHHHHHhcCC--CeEEECCEEEEEEEcCC-eEE-EEEecCCeEEEEECCEEEECCCHHHHHhCccC-
Confidence 466788997 8999999987632 79999999999998644 463 777776 67999999999999999887542
Q ss_pred hhhhHHHHHhhccCCccEEEEEEEeccccccc----cCceeeccCcccchhcccccccccccCCCCcEEE-EEec-CCCC
Q 018523 163 WKEMAYFKRLEKLVGVPVINIHIWFDRKLKNT----YDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLE-LVFA-PAEE 236 (354)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~s~~~~~~~~~g~~~l~-~~~~-~~~~ 236 (354)
.+....+++++++|.+..|+++.|++++|.. ++.+...+.+...++ ..+...+ .+ ...+++ ++.. ....
T Consensus 304 -l~~~~~~~l~~~~~~~~~kv~l~~~~~~w~~~~~~~g~~~~~~~~~~~~~-~~s~~~~--~~-~~~l~~~~~~g~~~~~ 378 (489)
T 2jae_A 304 -LPGDVLTALKAAKPSSSGKLGIEYSRRWWETEDRIYGGASNTDKDISQIM-FPYDHYN--SD-RGVVVAYYSSGKRQEA 378 (489)
T ss_dssp -CCHHHHHHHHTEECCCEEEEEEEESSCHHHHTTCCCSCEEEESSTTCEEE-CCSSSTT--SS-CEEEEEEEEETHHHHH
T ss_pred -CCHHHHHHHHhCCCccceEEEEEeCCCCccCCCCcccccccCCCCceEEE-eCCCCCC--CC-CCEEEEEeeCCchhhh
Confidence 2445667788899999999999999998742 122333444444333 1221111 12 234443 3332 3345
Q ss_pred CCCCChHHHHHHHHHHHHHhCCC-CccccccccceeEEEEEEeCCCc-----cc-cC------CCCC-CCCCCCCCCCCc
Q 018523 237 WISCSDSEIIDATMKELAKLFPD-EISADQSKAKIVKYHVVKTPRSV-----YK-TI------PNCE-PCRPLQRSPVEG 302 (354)
Q Consensus 237 ~~~~~~ee~~~~~~~~l~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~------~g~~-~~~~~~~~~~~~ 302 (354)
|..++++++++.+++.|++++|. ... .+......+|.+.. |. +. |+.. ...+.+++|.+|
T Consensus 379 ~~~~~~~~~~~~~l~~L~~~~~~~~~~------~~~~~~~~~W~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 452 (489)
T 2jae_A 379 FESLTHRQRLAKAIAEGSEIHGEKYTR------DISSSFSGSWRRTKYSESAWANWAGSGGSHGGAATPEYEKLLEPVDK 452 (489)
T ss_dssp HHTSCHHHHHHHHHHHHHHHHCGGGGS------SEEEEEEEEGGGSTTTSCSSCEETTC-------CCHHHHHHTSCBTT
T ss_pred hhcCCHHHHHHHHHHHHHHHcCcchhh------hccccEEEEcCCCCCCCCcchhcccccCCCcccchhhHHHHhCCCCc
Confidence 77789999999999999999986 331 34555566675432 21 11 4431 122345678899
Q ss_pred eEEeeccccCCCCCchhHHHHHHHHHHHHHHHHhhhH
Q 018523 303 FYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLL 339 (354)
Q Consensus 303 L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~~~~~~ 339 (354)
|||||++++. ++++|+||+.||.+||++|++.+..+
T Consensus 453 l~faG~~~~~-~~~~v~gAi~sg~~aA~~i~~~l~~~ 488 (489)
T 2jae_A 453 IYFAGDHLSN-AIAWQHGALTSARDVVTHIHERVAQE 488 (489)
T ss_dssp EEECSGGGBS-STTSHHHHHHHHHHHHHHHHHHHHC-
T ss_pred EEEeEHHhcc-CccHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999974 44799999999999999999887654
No 19
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.86 E-value=1.3e-21 Score=193.61 Aligned_cols=228 Identities=19% Similarity=0.261 Sum_probs=157.9
Q ss_pred eeeecCCCcccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcC------CeEEEcCEEEEccChhhHhhh--
Q 018523 87 MAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN------GNVIDGDAYVFATPVDILKLQ-- 158 (354)
Q Consensus 87 ~~~~~Gg~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~------g~~~~ad~VI~a~p~~~l~~l-- 158 (354)
+..+.||+ ++|+++|++ +.+|++|++|++|.+++++ | .|++.+ |++++||+||+|+|+.+++++
T Consensus 393 ~~~~~gG~-~~l~~~La~-----~l~I~l~~~V~~I~~~~~~-v-~V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~l~~ 464 (662)
T 2z3y_A 393 HLTVRNGY-SCVPVALAE-----GLDIKLNTAVRQVRYTASG-C-EVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPP 464 (662)
T ss_dssp CEEETTCT-THHHHHHTT-----TCEEETTEEEEEEEEETTE-E-EEEEEESSCTTCEEEEEESEEEECCCHHHHHCSSC
T ss_pred eeeecCcH-HHHHHHHHh-----cCceecCCeEEEEEECCCc-E-EEEEeecccCCCCeEEEeCEEEECCCHHHHhcccC
Confidence 34668888 789888874 4589999999999997555 5 477755 568999999999999999874
Q ss_pred ----CCcchhhhHHHHHhhccCCccEEEEEEEeccccccc-cCceee--cc---CcccchhcccccccccccCCCCcEEE
Q 018523 159 ----LPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNT-YDHLLF--SR---SSLLSVYADMSLTCKEYYNPNQSMLE 228 (354)
Q Consensus 159 ----l~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~-~~~~~~--~~---~~~~~~~~~~s~~~~~~~~~g~~~l~ 228 (354)
.|+ .|....++++++.|.++.||++.|++++|+. .+.+.+ .. .+...++.+.+ ....+++
T Consensus 465 ~i~f~P~--LP~~k~~Ai~~l~~g~~~KV~l~f~~~fW~~~~~~~G~l~~~~~~~~~~~~~~~~~--------~~~vL~~ 534 (662)
T 2z3y_A 465 AVQFVPP--LPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLY--------KAPILLA 534 (662)
T ss_dssp SSEEESC--CCHHHHHHHHHSEECCCEEEEEECSSCCSCTTCSEEEECCSSSTTTTEEEEEECCS--------SSSEEEE
T ss_pred ceEEcCC--CCHHHHHHHHhCCccceeEEEEEcCcccccCCCCceeeecCCCCCCCceeEEEeCC--------CCCEEEE
Confidence 233 2444567789999999999999999999952 122211 11 11111111110 1123344
Q ss_pred EEec-CCCCCCCCChHHHHHHHHHHHHHhCCCCccccccccceeEEEEEEeCC-----Ccccc-CCCCCC------C---
Q 018523 229 LVFA-PAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPR-----SVYKT-IPNCEP------C--- 292 (354)
Q Consensus 229 ~~~~-~~~~~~~~~~ee~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~g~~~------~--- 292 (354)
++.. .+..+..++++++++.+++.|.++||.... .++....+.+|.. +.|.+ .||... .
T Consensus 535 ~~~G~~a~~~~~lsdee~~~~~l~~L~~~~g~~~~-----~~p~~~~v~~W~~dp~~~Gsys~~~pg~~~~~~~~l~~p~ 609 (662)
T 2z3y_A 535 LVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAV-----PQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPI 609 (662)
T ss_dssp EECTHHHHHHTTSCHHHHHHHHHHHHHHHHCTTSS-----CCCSEEEECCTTTCTTTSSSCEECBTTCCTHHHHHHHCCB
T ss_pred EeccHhHHHHHhCCHHHHHHHHHHHHHHHhCCccc-----CCCceeEEEEECCCCCCCcccccCCCCCchhhHHHHhCcC
Confidence 4433 344566789999999999999999986421 2466677778865 34543 455421 0
Q ss_pred -----CCCCCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHHHhh
Q 018523 293 -----RPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYV 337 (354)
Q Consensus 293 -----~~~~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~~~~ 337 (354)
+|..+.+.++|||||++++..|+++|+||+.||++||++|++.++
T Consensus 610 ~~~~~~~~~~~~~grl~FAGe~ts~~~~g~v~GAi~SG~raA~~i~~~~~ 659 (662)
T 2z3y_A 610 TPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFL 659 (662)
T ss_dssp CC---------CCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHHT
T ss_pred ccccccccccCCCCcEEEEeccccCCCCcCHHHHHHHHHHHHHHHHHHcc
Confidence 112245668999999999988889999999999999999998765
No 20
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.86 E-value=3e-21 Score=193.74 Aligned_cols=229 Identities=19% Similarity=0.253 Sum_probs=160.1
Q ss_pred eeeecCCCcccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcC------CeEEEcCEEEEccChhhHhhhC-
Q 018523 87 MAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN------GNVIDGDAYVFATPVDILKLQL- 159 (354)
Q Consensus 87 ~~~~~Gg~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~------g~~~~ad~VI~a~p~~~l~~ll- 159 (354)
+..+.||+ ++|+++|++ +.+|++|++|++|.+++++ | .|++.+ |++++||+||+|+|+.++++++
T Consensus 564 ~~~~~gG~-~~L~~aLa~-----~l~I~Lnt~V~~I~~~~~g-V-~V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk~l~~ 635 (852)
T 2xag_A 564 HLTVRNGY-SCVPVALAE-----GLDIKLNTAVRQVRYTASG-C-EVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPP 635 (852)
T ss_dssp CEEETTCT-THHHHHHTT-----TCCEECSEEEEEEEEETTE-E-EEEEEESSSTTCEEEEEESEEEECCCHHHHHCSSC
T ss_pred eEEecCcH-HHHHHHHHh-----CCCEEeCCeEEEEEEcCCc-E-EEEEeecccCCCCeEEECCEEEECCCHHHHHhhhc
Confidence 45678898 789888875 3489999999999996554 5 377654 5689999999999999999842
Q ss_pred -----CcchhhhHHHHHhhccCCccEEEEEEEeccccccc-cCceee--c-c--CcccchhcccccccccccCCCCcEEE
Q 018523 160 -----PENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNT-YDHLLF--S-R--SSLLSVYADMSLTCKEYYNPNQSMLE 228 (354)
Q Consensus 160 -----~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~-~~~~~~--~-~--~~~~~~~~~~s~~~~~~~~~g~~~l~ 228 (354)
|+ .|....++++++.|.++.||+|.|++++|.. .+.+.+ . . .+...++.+.+ ....+++
T Consensus 636 ~I~F~P~--LP~~k~~AI~~l~~g~v~KV~L~F~~~fW~~~~~~fG~l~~~~~~~~~l~~~~~~~--------~~pvLl~ 705 (852)
T 2xag_A 636 AVQFVPP--LPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLY--------KAPILLA 705 (852)
T ss_dssp SSEEESC--CCHHHHHHHHHSEECCCEEEEEECSSCCSCTTCCEEEECCSSSTTTTTTCEEEECS--------SSSEEEE
T ss_pred ccccCCC--CCHHHHHHHHcCCccceEEEEEEcCCcccCCCCCeeeeeccccCCCCceEEEecCC--------CCCEEEE
Confidence 22 2434566788999999999999999999953 222211 1 1 11111211110 1123444
Q ss_pred EEec-CCCCCCCCChHHHHHHHHHHHHHhCCCCccccccccceeEEEEEEeCC-----Ccccc-CCCCCC------CC--
Q 018523 229 LVFA-PAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPR-----SVYKT-IPNCEP------CR-- 293 (354)
Q Consensus 229 ~~~~-~~~~~~~~~~ee~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~g~~~------~~-- 293 (354)
++.. .+..+..++++++++.+++.|.++||.... .++....+.+|.. +.|.+ .||+.. ..
T Consensus 706 ~v~G~~a~~l~~lsdeel~~~~l~~L~~ifG~~~~-----~~P~~~~vtrW~~dp~s~GsYs~~~pG~~~~~~~~L~~P~ 780 (852)
T 2xag_A 706 LVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAV-----PQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPI 780 (852)
T ss_dssp EECHHHHHHGGGSCHHHHHHHHHHHHHHHHCTTTC-----CCCSEEEECCTTTCTTTSSSCEECBTTCCTTHHHHTTSCB
T ss_pred EecCcCHHHHhcCCHHHHHHHHHHHHHHHhCcccc-----CCceEEEEEecCCCCCcCccccccCCCcchhhHHHHhCcc
Confidence 4433 345566789999999999999999986421 2466677788865 34543 455421 11
Q ss_pred ------CCCCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHHHhhh
Q 018523 294 ------PLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVL 338 (354)
Q Consensus 294 ------~~~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~~~~~ 338 (354)
|..+.+.++|||||++++..|+++|+||+.||++||++|++.+..
T Consensus 781 ~~~~~~p~~~~~~grL~FAGE~Ts~~~~gtveGAi~SG~RAA~~Il~~l~~ 831 (852)
T 2xag_A 781 TPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLG 831 (852)
T ss_dssp CCCCSSTTCCCCCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccccccccccCCCCcEEEEehhHhCCCCcCHHHHHHHHHHHHHHHHHHhhC
Confidence 123456689999999999888899999999999999999998753
No 21
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.84 E-value=9.4e-21 Score=182.62 Aligned_cols=295 Identities=14% Similarity=0.122 Sum_probs=175.6
Q ss_pred ccCCCHHHHHHHc------CCChHHHHHHHHHHHh---hhccCCcccccHHHHHHHHHHHhhccCCceeeeecCCCcccc
Q 018523 28 QDGLTVQEWMRKQ------GVPDRVTTEVFIAMSK---ALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERL 98 (354)
Q Consensus 28 ~d~~s~~~~l~~~------g~~~~~~~~~~~~~~~---~~~~~~~~~~sa~~~~~~~~~~~~~~~g~~~~~~~Gg~~~~l 98 (354)
.+++|+.+|+.++ .+++.. ..++..+.. ..++.+++++|+.+++. ...+ ...++.| + ++|
T Consensus 136 ~~d~s~~~~l~~~l~~~~~~l~~~~-~~~~~~~~~~~~~~~g~~~~~~s~~~~~~-------~~~~-~~~~~~g-~-~~l 204 (516)
T 1rsg_A 136 VSDCSFFQLVMKYLLQRRQFLTNDQ-IRYLPQLCRYLELWHGLDWKLLSAKDTYF-------GHQG-RNAFALN-Y-DSV 204 (516)
T ss_dssp --CCBHHHHHHHHHHHHGGGSCHHH-HHHHHHHHGGGHHHHTBCTTTSBHHHHCC-------CCSS-CCEEESC-H-HHH
T ss_pred CCCCCHHHHHHHHHHHhhcccCHHH-HHHHHHHHHHHHHHhCCChHHCChHHHHh-------hccC-cchhhhC-H-HHH
Confidence 5679999998764 122221 223334332 23466788888776431 1112 2345677 6 788
Q ss_pred hHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhhHhhh-------------CCcchhh
Q 018523 99 CLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQ-------------LPENWKE 165 (354)
Q Consensus 99 ~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~l~~l-------------l~~~~~~ 165 (354)
+++|++.+. +++|++|++|++|..++++.+ .|++.+|++++||+||+|+|+..++.. .|+ .|
T Consensus 205 ~~~l~~~l~--~~~i~~~~~V~~I~~~~~~~v-~v~~~~g~~~~ad~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~--Lp 279 (516)
T 1rsg_A 205 VQRIAQSFP--QNWLKLSCEVKSITREPSKNV-TVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPP--LK 279 (516)
T ss_dssp HHHHHTTSC--GGGEETTCCEEEEEECTTSCE-EEEETTSCEEEEEEEEECCCHHHHHGGGSSCSCSTTCCEEESC--CC
T ss_pred HHHHHHhCC--CCEEEECCEEEEEEEcCCCeE-EEEECCCcEEECCEEEECCCHHHhhhccccccccccceEecCC--CC
Confidence 888876553 368999999999998533445 588888988999999999999999742 233 24
Q ss_pred hHHHHHhhccCCccEEEEEEEecccccccc-CceeeccC---cccchhcccc--------------------c-c-ccc-
Q 018523 166 MAYFKRLEKLVGVPVINIHIWFDRKLKNTY-DHLLFSRS---SLLSVYADMS--------------------L-T-CKE- 218 (354)
Q Consensus 166 ~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~-~~~~~~~~---~~~~~~~~~s--------------------~-~-~~~- 218 (354)
....++++++.|.+..||++.|++++|+.. ..+....+ ++...+.... . + .+.
T Consensus 280 ~~~~~ai~~~~~~~~~Kv~l~f~~~fW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (516)
T 1rsg_A 280 PVIQDAFDKIHFGALGKVIFEFEECCWSNESSKIVTLANSTNEFVEIVRNAENLDELDSMLEREDSQKHTSVTCWSQPLF 359 (516)
T ss_dssp HHHHHHTTSSCCCCCEEEEEEESSCCSCCSCSEEEECCCCCHHHHHHHHHCCSHHHHHHHC---------CCCTTSSCEE
T ss_pred HHHHHHHHhCCCCcceEEEEEeCCCCCCCCCCcEEEeCCCCccchhhcccCcccchhhhcccccccccccccccccCcee
Confidence 456778899999999999999999999632 22222111 1111110000 0 0 010
Q ss_pred ----ccCCCCcEEE-EEecC-CCCCCCC--ChHHHHHH---HHHHHHHhCCC------Ccccccc--cccee--EEEEEE
Q 018523 219 ----YYNPNQSMLE-LVFAP-AEEWISC--SDSEIIDA---TMKELAKLFPD------EISADQS--KAKIV--KYHVVK 277 (354)
Q Consensus 219 ----~~~~g~~~l~-~~~~~-~~~~~~~--~~ee~~~~---~~~~l~~~~p~------~~~~~~~--~~~~~--~~~~~~ 277 (354)
..+.+..++. ++..+ +..+..+ +++++++. +++.+.++|+. ...+... ...++ .....+
T Consensus 360 ~~~~~~~~~~~~L~~~~~g~~a~~~~~l~~~~~~~~~~~~~~l~~l~~~~g~~~~~~~~~~~~~~~~a~~p~~~~~~~~~ 439 (516)
T 1rsg_A 360 FVNLSKSTGVASFMMLMQAPLTNHIESIREDKERLFSFFQPVLNKIMKCLDSEDVIDGMRPIENIANANKPVLRNIIVSN 439 (516)
T ss_dssp EEEHHHHTSCSEEEEEECBTHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTTCCCCEECCC-------CCSCEEEEEEECC
T ss_pred EEEeeecCCCcEEEEEecchHHHHHHhcCCCHHHHHHHHHHHHHHHHhhccccccccCCCCcccccccCCCccceEEEec
Confidence 0122344444 44332 2334445 78887654 66666666652 2100000 00122 555566
Q ss_pred eC---C--Cccc-cCCCCCCC--CCCCC-CCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHHHhhh
Q 018523 278 TP---R--SVYK-TIPNCEPC--RPLQR-SPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVL 338 (354)
Q Consensus 278 ~~---~--~~~~-~~~g~~~~--~~~~~-~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~~~~~ 338 (354)
|. + |.|. ..||.... ...++ .+.++|||||++++..|+++|+||++||.+||++|++.+..
T Consensus 440 W~~dp~~~Gsys~~~~g~~~~~~~~~l~~~~~~rl~FAGe~ts~~~~g~v~GA~~SG~raA~~i~~~~~~ 509 (516)
T 1rsg_A 440 WTRDPYSRGAYSACFPGDDPVDMVVAMSNGQDSRIRFAGEHTIMDGAGCAYGAWESGRREATRISDLLKL 509 (516)
T ss_dssp TTTCTTTTTCCCCCBC----CHHHHHHHHCSSSSEEECSTTSCSTTBTSHHHHHHHHHHHHHHHHHHHHG
T ss_pred CCCCCCCCccCCCcCCCCCHHHHHHHhccCCCCcEEEeccccccCCCccchhHHHHHHHHHHHHHHHhhh
Confidence 63 3 4455 34565211 11122 36689999999999888899999999999999999988764
No 22
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.84 E-value=1.6e-20 Score=187.24 Aligned_cols=227 Identities=20% Similarity=0.288 Sum_probs=157.2
Q ss_pred eeeeecCCCcccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhhHhhh----CCc
Q 018523 86 KMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQ----LPE 161 (354)
Q Consensus 86 ~~~~~~Gg~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~l~~l----l~~ 161 (354)
....+.+|+ +.|++++++ |.+|+++++|++|..++++ | .|++.+|++++||+||+|+|+..++.. .|+
T Consensus 525 ~~~~~~~G~-~~l~~aLa~-----gl~I~l~t~V~~I~~~~~~-v-~V~~~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~ 596 (776)
T 4gut_A 525 DHTLLTPGY-SVIIEKLAE-----GLDIQLKSPVQCIDYSGDE-V-QVTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPP 596 (776)
T ss_dssp CEEECTTCT-HHHHHHHHT-----TSCEESSCCEEEEECSSSS-E-EEEETTCCEEEESEEEECCCHHHHHTTCSEEESC
T ss_pred CeEEECChH-HHHHHHHHh-----CCcEEcCCeeEEEEEcCCE-E-EEEECCCcEEEcCEEEECCCHHHHhhcccccCCC
Confidence 345667887 677777653 6799999999999986454 6 488888988999999999999999762 232
Q ss_pred chhhhHHHHHhhccCCccEEEEEEEeccccccc----cCceeec-----cCcccchhcccccccccccCCC-CcEEE-EE
Q 018523 162 NWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNT----YDHLLFS-----RSSLLSVYADMSLTCKEYYNPN-QSMLE-LV 230 (354)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~----~~~~~~~-----~~~~~~~~~~~s~~~~~~~~~g-~~~l~-~~ 230 (354)
.|....+++.++.+.++.|+++.|++++|.. .+.+.+. +.++..++.+. .+.+ ..+|. ++
T Consensus 597 --Lp~~~~~ai~~l~~g~~~KV~l~f~~~FW~~~~~g~~~fG~l~~~~~~~~~~~~~~d~-------~p~g~~~vL~~~i 667 (776)
T 4gut_A 597 --LSEKKMKAINSLGAGIIEKIALQFPYRFWDSKVQGADFFGHVPPSASKRGLFAVFYDM-------DPQKKHSVLMSVI 667 (776)
T ss_dssp --CCHHHHHHHHHEEEECCEEEEEECSSCTTHHHHTTCSEEEECCSSGGGTTEEEEEEES-------CTTSCSCEEEEEE
T ss_pred --CCHHHHHHHHhCCCeeEEEEEEecCcccccccCCCCceEEeecCCcCCCceEEEEecC-------CCCCCceEEEEEe
Confidence 2445677788888999999999999999952 1111111 11222222222 1233 34444 44
Q ss_pred ec-CCCCCCCCChHHHHHHHHHHHHHhCCCCccccccccceeEEEEEEeCC-----Ccccc-CCCCC-CCCCCCCCCC-C
Q 018523 231 FA-PAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPR-----SVYKT-IPNCE-PCRPLQRSPV-E 301 (354)
Q Consensus 231 ~~-~~~~~~~~~~ee~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~g~~-~~~~~~~~~~-~ 301 (354)
.. .+..+..++++++++.++++|.++||.... ..+....+.+|.. +.|.+ .||.. ...+.+..|+ +
T Consensus 668 ~G~~a~~l~~lsdeel~~~~l~~L~~ifg~~~~-----~~P~~~~vt~W~~dp~s~Gsys~~~~g~~~~~~~~L~~p~~g 742 (776)
T 4gut_A 668 AGEAVASVRTLDDKQVLQQCMATLRELFKEQEV-----PDPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAEDIQG 742 (776)
T ss_dssp CTHHHHHHHTSCHHHHHHHHHHHHHHHTTTSCC-----CCCSEEEECCGGGCTTTCCSEEEEBTTCCTHHHHHHHCCBTT
T ss_pred cchhHHHHHcCCHHHHHHHHHHHHHHHhCcccc-----cCcceEEEecCCCCCccCCCCCccCCCCchhHHHHHhCcCCC
Confidence 33 234566789999999999999999986421 2456667777743 33442 34432 1122334454 7
Q ss_pred ceEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 018523 302 GFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 334 (354)
Q Consensus 302 ~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~ 334 (354)
+|||||++++..|+++|+||++||.+||++|++
T Consensus 743 rL~FAGE~Ts~~~~gtveGAi~SG~RaA~~Ila 775 (776)
T 4gut_A 743 TVFFAGEATNRHFPQTVTGAYLSGVREASKIAA 775 (776)
T ss_dssp TEEECSGGGCSSSCSSHHHHHHHHHHHHHHHHC
T ss_pred cEEEEehhhcCCCCcCHHHHHHHHHHHHHHHHh
Confidence 899999999988889999999999999999974
No 23
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.83 E-value=2.8e-21 Score=189.13 Aligned_cols=306 Identities=12% Similarity=0.075 Sum_probs=184.3
Q ss_pred ccccCCCH---HHHHHH-cCCChHHHHHHHHHHHhhhcc-CCcccccHHHHHHHHHHHhhccCCceeeeecCCCcccchH
Q 018523 26 EAQDGLTV---QEWMRK-QGVPDRVTTEVFIAMSKALNF-INPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCL 100 (354)
Q Consensus 26 ~~~d~~s~---~~~l~~-~g~~~~~~~~~~~~~~~~~~~-~~~~~~sa~~~~~~~~~~~~~~~g~~~~~~~Gg~~~~l~~ 100 (354)
.++|++|+ .+||++ ..++ . ...++..+.....+ .+....|+..++... +. ..+..+..+.||+ ++|++
T Consensus 279 ~~~d~~S~~~~~~~L~~~~~~s-~-~~~~~~~~~~~~gg~~~~~~~S~le~L~~~---~~-~~~~~~~~i~GG~-~~L~~ 351 (721)
T 3ayj_A 279 VAFEKGTLPPVDGVLDVDESIS-Y-YVELFGRFGFGTGGFKPLYNISLVEMMRLI---LW-DYSNEYTLPVTEN-VEFIR 351 (721)
T ss_dssp HHHHHTSSCCGGGTSCHHHHHH-H-HHHHHHHHCSSSSCCGGGTTBBHHHHHHHH---HT-TTTCEECCSSSST-HHHHH
T ss_pred HhhcccchhHHHHHHHhccccH-H-HHHHHHHHhhccCCCCCccchhHHHHHHHH---hc-CCccceeEECCcH-HHHHH
Confidence 35677777 777754 1122 2 12233322211122 344578888777654 21 2234567788997 89999
Q ss_pred HHHHHHHHcCCEEEecceee--EEEecCCC------CEEEEE-EcCCe--EEEcCEEEEccChhhHhh------hC----
Q 018523 101 PIVEHIQSLGGEVRLNSRVQ--KIELNDDG------TVKNFL-LTNGN--VIDGDAYVFATPVDILKL------QL---- 159 (354)
Q Consensus 101 ~l~~~l~~~g~~i~~~~~V~--~I~~~~~g------~v~~V~-~~~g~--~~~ad~VI~a~p~~~l~~------ll---- 159 (354)
+|++.+.. |+.|+++++|+ +|.+++++ .| .|+ ..+|+ +++||+||+|+|++.+.. +-
T Consensus 352 aLa~~l~~-g~~I~l~~~V~~~~I~~~~~g~~~~~~~V-~V~~~~~G~~~~~~aD~VIvTvP~~~L~~~~~r~~i~~~~~ 429 (721)
T 3ayj_A 352 NLFLKAQN-VGAGKLVVQVRQERVANACHSGTASARAQ-LLSYDSHNAVHSEAYDFVILAVPHDQLTPIVSRSGFEHAAS 429 (721)
T ss_dssp HHHHHHHH-HTTTSEEEEEECEEEEEEEECSSSSCCEE-EEEEETTCCEEEEEESEEEECSCHHHHHHHHSSSCSSCEEE
T ss_pred HHHHhccc-CCceEeCCEEEeeeEEECCCCCccccceE-EEEEecCCceEEEEcCEEEECCCHHHHhhcccccccccccc
Confidence 99987642 67899999999 99986444 25 463 45566 789999999999999954 21
Q ss_pred -------------------Ccchhh-------hHHHHHhhccCCccEEEEEEEe-----ccccccccC----ceeeccCc
Q 018523 160 -------------------PENWKE-------MAYFKRLEKLVGVPVINIHIWF-----DRKLKNTYD----HLLFSRSS 204 (354)
Q Consensus 160 -------------------~~~~~~-------~~~~~~~~~~~~~~~~~v~l~~-----~~~~~~~~~----~~~~~~~~ 204 (354)
|+.+.+ ....+++++++|.+..||++.| +++||+... ...+++.+
T Consensus 430 ~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~~l~~~~s~Kv~l~~~~~~~~~~fW~~~~g~~i~~s~TD~~ 509 (721)
T 3ayj_A 430 QNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIGQLHMARSSKVFATVKTAALDQPWVPQWRGEPIKAVVSDSG 509 (721)
T ss_dssp EEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHHTCCEECEEEEEEEEEGGGGGSTTSCEETTEECCEEEETTT
T ss_pred ccccccccccccccccccCCcccCCcccccccHHHHHHHHhcCcccceEEEEEEccccCCCCcccccCCCCceeeecCCC
Confidence 111113 4567789999999999999999 899996321 23456666
Q ss_pred ccchhcccccccccccCCCCc-EEE-EEec-CCCCC------CCCChHHH-------HHHHHHHHH--HhCCCCcc--c-
Q 018523 205 LLSVYADMSLTCKEYYNPNQS-MLE-LVFA-PAEEW------ISCSDSEI-------IDATMKELA--KLFPDEIS--A- 263 (354)
Q Consensus 205 ~~~~~~~~s~~~~~~~~~g~~-~l~-~~~~-~~~~~------~~~~~ee~-------~~~~~~~l~--~~~p~~~~--~- 263 (354)
+..++.-+++...++.+++.. ++. ++.. .+..| ..+++++. ++.++++|. +++|+... +
T Consensus 510 ~r~~~~~p~p~~~d~~~~~~gvlL~sYtwg~dA~~~~~~~g~~~~~~~er~~~~~~~~~~~l~~la~~~~~p~~~~~~~~ 589 (721)
T 3ayj_A 510 LAASYVVPSPIVEDGQAPEYSSLLASYTWEDDSTRLRHDFGLYPQNPATETGTADGMYRTMVNRAYRYVKYAGASNAQPW 589 (721)
T ss_dssp TEEEEEEECSCC----CCSEEEEEEEEEETHHHHHHHTTCCSSSEESSSSSCCCHHHHHHHHHHTCCEECCTTCSSCEEC
T ss_pred cceEEEeccCcccccCCCCCcEEEEEEeCccchhhhhccccccCCChHHhhhhhhHHHHHHHHHHhhhccCccccccccc
Confidence 543321011100011223333 333 3332 23344 33444444 889999999 88986530 0
Q ss_pred -------cccccceeEEEEEEeCC-Cccc-cCCCCC-------CCC--CCCCCCCCceEEeeccccCCCCCchhHHHHHH
Q 018523 264 -------DQSKAKIVKYHVVKTPR-SVYK-TIPNCE-------PCR--PLQRSPVEGFYLAGDYTKQKYLASMEGAVLSG 325 (354)
Q Consensus 264 -------~~~~~~~~~~~~~~~~~-~~~~-~~~g~~-------~~~--~~~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG 325 (354)
.+.......+.+...|. +.|. +.||+. .+. .....+.++|||||++++. +++|+|||+.||
T Consensus 590 ~~~~l~~~~~~~~~~~~dW~~dps~Gaf~~~~pgq~~~~~l~~~~~~~~~~~~~~gri~fAGe~~S~-~~GWieGAl~Sa 668 (721)
T 3ayj_A 590 WFYQLLAEARTADRFVFDWTTNKTAGGFKLDMTGDHHQSNLCFRYHTHALAASLDNRFFIASDSYSH-LGGWLEGAFMSA 668 (721)
T ss_dssp HHHHHHHTSCSTTCEEEEGGGSTTSSSEECCBTTTHHHHHHHHHGGGGGGCTTTCCCEEECSGGGSS-CTTSHHHHHHHH
T ss_pred hhhhhhhhcccCceEEEeCCCCCCCCccccCCCccchhhhhhhhhhhhccccCCCCCEEEeehhhcc-CCceehHHHHHH
Confidence 00011122222222341 2233 457751 111 1234466899999999985 568999999999
Q ss_pred HHHHHHHHHHhhhHHH
Q 018523 326 KLCAQAIVQDYVLLAA 341 (354)
Q Consensus 326 ~~aa~~il~~~~~~~~ 341 (354)
.+|+..|+..++.-++
T Consensus 669 ~~Aa~~i~~~~~~~~~ 684 (721)
T 3ayj_A 669 LNAVAGLIVRANRGDV 684 (721)
T ss_dssp HHHHHHHHHHHTTTCG
T ss_pred HHHHHHHHHHhcCCCC
Confidence 9999999999887655
No 24
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.72 E-value=4e-16 Score=141.72 Aligned_cols=224 Identities=15% Similarity=0.109 Sum_probs=149.9
Q ss_pred cCCCcccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEE-EcCEEEEccChhhHhhhCCcchhhhHHH
Q 018523 91 DGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVI-DGDAYVFATPVDILKLQLPENWKEMAYF 169 (354)
Q Consensus 91 ~Gg~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~-~ad~VI~a~p~~~l~~ll~~~~~~~~~~ 169 (354)
.+++ +.|.+.+. + |.+|+++++|++|..++++ + .|++.+|+.+ ++|.||+|.|+..+.++++.. + ...
T Consensus 106 ~~~~-~~l~~~l~----~-g~~i~~~~~v~~i~~~~~~-~-~v~~~~g~~~~~a~~vV~a~g~~~~~~~~~~~--~-~l~ 174 (336)
T 1yvv_A 106 KPGM-SAITRAMR----G-DMPVSFSCRITEVFRGEEH-W-NLLDAEGQNHGPFSHVIIATPAPQASTLLAAA--P-KLA 174 (336)
T ss_dssp SSCT-HHHHHHHH----T-TCCEECSCCEEEEEECSSC-E-EEEETTSCEEEEESEEEECSCHHHHGGGGTTC--H-HHH
T ss_pred CccH-HHHHHHHH----c-cCcEEecCEEEEEEEeCCE-E-EEEeCCCcCccccCEEEEcCCHHHHHHhhccC--H-HHH
Confidence 3444 45555443 3 8899999999999986555 5 3888888766 499999999999998887642 2 344
Q ss_pred HHhhccCCccEEEEEEEeccccccccCceeeccCcccchhcccccccccccCCCCcEEEEEec--CCCCCCCCChHHHHH
Q 018523 170 KRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFA--PAEEWISCSDSEIID 247 (354)
Q Consensus 170 ~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~g~~~l~~~~~--~~~~~~~~~~ee~~~ 247 (354)
..+..+.|.++.++++.++++++....++.+.+.+...++ +.+. .|...+.+ ..+.+... ....+.+++++++.+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~-~p~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~ 251 (336)
T 1yvv_A 175 SVVAGVKMDPTWAVALAFETPLQTPMQGCFVQDSPLDWLA-RNRS-KPERDDTL-DTWILHATSQWSRQNLDASREQVIE 251 (336)
T ss_dssp HHHTTCCEEEEEEEEEEESSCCSCCCCEEEECSSSEEEEE-EGGG-STTCCCSS-EEEEEEECHHHHHHTTTSCHHHHHH
T ss_pred HHHhhcCccceeEEEEEecCCCCCCCCeEEeCCCceeEEE-ecCc-CCCCCCCC-cEEEEEeCHHHHHHHHhCCHHHHHH
Confidence 5677888999999999999987754444444444433332 2111 11111111 22222222 234566789999999
Q ss_pred HHHHHHHHhCCCCccccccccceeEEEEEEeCCCccccCCCCCCCCCCCCCCCCceEEeeccccCCCCCchhHHHHHHHH
Q 018523 248 ATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKL 327 (354)
Q Consensus 248 ~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~ 327 (354)
.+++.+.++++... ..+......+|.++.+.+..+.. ....+.++|+||||++.+ +++++|+.||.+
T Consensus 252 ~l~~~l~~~lg~~~------~~p~~~~~~rw~~a~~~~~~~~~----~~~~~~~rl~laGDa~~g---~gv~~a~~sg~~ 318 (336)
T 1yvv_A 252 HLHGAFAELIDCTM------PAPVFSLAHRWLYARPAGAHEWG----ALSDADLGIYVCGDWCLS---GRVEGAWLSGQE 318 (336)
T ss_dssp HHHHHHHTTCSSCC------CCCSEEEEEEEEEEEESSCCCCS----CEEETTTTEEECCGGGTT---SSHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCC------CCCcEEEccccCccCCCCCCCCC----eeecCCCCEEEEecCCCC---CCHHHHHHHHHH
Confidence 99999999997532 12344566778766554443321 122345899999999986 699999999999
Q ss_pred HHHHHHHHhhhHHH
Q 018523 328 CAQAIVQDYVLLAA 341 (354)
Q Consensus 328 aa~~il~~~~~~~~ 341 (354)
+|+.|.+.+.+++-
T Consensus 319 lA~~l~~~~~~~~~ 332 (336)
T 1yvv_A 319 AARRLLEHLQLEHH 332 (336)
T ss_dssp HHHHHHHHTTC---
T ss_pred HHHHHHHHhhhhhh
Confidence 99999999988763
No 25
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.70 E-value=9.6e-17 Score=150.73 Aligned_cols=274 Identities=10% Similarity=0.103 Sum_probs=163.3
Q ss_pred ccCCCHHHHHHHcCCChHHHHHHHHHHHhhhccCCcccccHHHHHHHHHH--HhhccCCceeeeecCCCcccchHHHHHH
Q 018523 28 QDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNR--FLQEKHGSKMAFLDGNPPERLCLPIVEH 105 (354)
Q Consensus 28 ~d~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~~~~--~~~~~~g~~~~~~~Gg~~~~l~~~l~~~ 105 (354)
.+.+|+.+|+++++++ ++.+.+..+++...+ .+++++|+.+++.++.. .+....+. ...+.||+ +++++++.+.
T Consensus 140 ~~~~s~~~~l~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~-~~~~~~g~-~~l~~~l~~~ 215 (424)
T 2b9w_A 140 DLMLPFDEFLALNGCE-AARDLWINPFTAFGY-GHFDNVPAAYVLKYLDFVTMMSFAKGD-LWTWADGT-QAMFEHLNAT 215 (424)
T ss_dssp GGGSBHHHHHHHTTCG-GGHHHHTTTTCCCCC-CCTTTSBHHHHHHHSCHHHHHHHHHTC-CBCCTTCH-HHHHHHHHHH
T ss_pred hhccCHHHHHHhhCcH-HHHHHHHHHHHhhcc-CChHhcCHHHHHHhhhHhhhhcccCCc-eEEeCChH-HHHHHHHHHh
Confidence 4579999999998664 567777778777665 57889999887654322 11111122 23567887 7899998865
Q ss_pred HHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhhHhhhCCcchhhhHHHHHhhccCCccEEEEEE
Q 018523 106 IQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHI 185 (354)
Q Consensus 106 l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~v~l 185 (354)
+ +.+|+++++|++|..+ ++.++ |++.+|+ ++||+||+|+|++.+.+++++. + ...+.+.++.+.+.. +.+
T Consensus 216 l---~~~v~~~~~V~~i~~~-~~~v~-v~~~~g~-~~ad~Vv~a~~~~~~~~~l~~~--~-~~~~~~~~~~~~~~~-~~~ 285 (424)
T 2b9w_A 216 L---EHPAERNVDITRITRE-DGKVH-IHTTDWD-RESDVLVLTVPLEKFLDYSDAD--D-DEREYFSKIIHQQYM-VDA 285 (424)
T ss_dssp S---SSCCBCSCCEEEEECC-TTCEE-EEESSCE-EEESEEEECSCHHHHTTSBCCC--H-HHHHHHTTCEEEEEE-EEE
T ss_pred h---cceEEcCCEEEEEEEE-CCEEE-EEECCCe-EEcCEEEECCCHHHHhhccCCC--H-HHHHHHhcCCcceeE-EEE
Confidence 4 6789999999999985 44464 8887774 8999999999999988877652 2 122234555555432 222
Q ss_pred EeccccccccCceeeccC--c-cc-chhcccccccccccCCC-CcEEE-EEecCCCCCCCCChHHHHHHHHHHHHHhCCC
Q 018523 186 WFDRKLKNTYDHLLFSRS--S-LL-SVYADMSLTCKEYYNPN-QSMLE-LVFAPAEEWISCSDSEIIDATMKELAKLFPD 259 (354)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~--~-~~-~~~~~~s~~~~~~~~~g-~~~l~-~~~~~~~~~~~~~~ee~~~~~~~~l~~~~p~ 259 (354)
.+...++ ...+ .++.+ + .. ..+.+... .+.+ ..++. +...+...+...+++++++.+++.|.++.+.
T Consensus 286 ~~~~~~~-~~~~-~~~~~~~~~~~g~~~~~~~~-----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~l~~l~~~ 358 (424)
T 2b9w_A 286 CLVKEYP-TISG-YVPDNMRPERLGHVMVYYHR-----WADDPHQIITTYLLRNHPDYADKTQEECRQMVLDDMETFGHP 358 (424)
T ss_dssp EEESSCC-SSEE-ECGGGGSGGGTTSCCEEEEC-----CTTCTTSCEEEEEECCBTTBCCCCHHHHHHHHHHHHHHTTCC
T ss_pred EEeccCC-cccc-cccCCCCCcCCCcceEEeee-----cCCCCceEEEEEeccCCCcccccChHHHHHHHHHHHHHcCCc
Confidence 3332322 1111 12211 1 11 01111110 1222 23433 4444445566778899999999999995443
Q ss_pred CccccccccceeEE-EEEEeCC-CccccCCCCCCCCCCCCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHH
Q 018523 260 EISADQSKAKIVKY-HVVKTPR-SVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIV 333 (354)
Q Consensus 260 ~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il 333 (354)
.. .++.. .+...|. +...+..|... +....++.+||||||++++. +.+|+|+.||.+||++|+
T Consensus 359 ~~-------~~~~~~~w~~~p~~~~~~~~~G~~~-~~~~~~~~~~l~~aG~~~~~---g~~e~a~~Sg~~aA~~~l 423 (424)
T 2b9w_A 359 VE-------KIIEEQTWYYFPHVSSEDYKAGWYE-KVEGMQGRRNTFYAGEIMSF---GNFDEVCHYSKDLVTRFF 423 (424)
T ss_dssp EE-------EEEEEEEEEEEEECCHHHHHTTHHH-HHHHTTTGGGEEECSGGGSC---SSHHHHHHHHHHHHHHHT
T ss_pred cc-------ccccccceeeeeccCHHHHhccHHH-HHHHHhCCCCceEecccccc---ccHHHHHHHHHHHHHHhc
Confidence 21 12211 1111121 11112223110 11112345799999999875 689999999999999875
No 26
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.46 E-value=9.5e-13 Score=123.86 Aligned_cols=149 Identities=14% Similarity=0.026 Sum_probs=106.9
Q ss_pred CCChHHHHHHhhhhhHHHhccc----ccccc--ccCCCHHHHHHHcCCChHHHHHHHHHHHhhhcc-CCcccccHHHHHH
Q 018523 1 MLTWPEKVKFAIGLLPAIIGGQ----AYVEA--QDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNF-INPDELSMQCILI 73 (354)
Q Consensus 1 ~ls~~~k~~~~~~~~~~~~~~~----~~~~~--~d~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~sa~~~~~ 73 (354)
+||+.+|.++.+.+.... ... ..++. ++++|+.+|++++++++...+.++.++ +++. .++.+.|+...+.
T Consensus 155 lLs~~eK~~l~kFL~~l~-~~~~~~~~~~~~~~l~~~s~~e~l~~~gls~~l~~fl~~al--aL~~~~~~~~~~a~~~l~ 231 (475)
T 3p1w_A 155 LLSLMEKNRCKNFYQYVS-EWDANKRNTWDNLDPYKLTMLEIYKHFNLCQLTIDFLGHAV--ALYLNDDYLKQPAYLTLE 231 (475)
T ss_dssp TSCHHHHHHHHHHHHHHH-HCCTTCGGGSTTCCTTTSBHHHHHHHTTCCHHHHHHHHHHT--SCCSSSGGGGSBHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHH-hhhhccchhhhcccccCCCHHHHHHHcCCCHHHHHHHHHHH--HhhcCCCcccCCHHHHHH
Confidence 489999999987775432 221 12332 468999999999999888665332222 2221 2345568877776
Q ss_pred HHHHHh---hccCCceeeeecCCCcccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEcc
Q 018523 74 ALNRFL---QEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFAT 150 (354)
Q Consensus 74 ~~~~~~---~~~~g~~~~~~~Gg~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~ 150 (354)
.+..+. ....+..+.||+||+ +.|+++|++.+++.|++|+++++|++|..+++|++++|++.+|++++||+||++.
T Consensus 232 ri~~y~~Sl~~yg~s~~~yp~gG~-~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~ 310 (475)
T 3p1w_A 232 RIKLYMQSISAFGKSPFIYPLYGL-GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDP 310 (475)
T ss_dssp HHHHHHHHHHHHSSCSEEEETTCT-THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECG
T ss_pred HHHHHHHHHhhcCCCceEEECCCH-HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECC
Confidence 554443 112234688999998 7999999999999999999999999999855677888999889899999999997
Q ss_pred Chh
Q 018523 151 PVD 153 (354)
Q Consensus 151 p~~ 153 (354)
...
T Consensus 311 ~~~ 313 (475)
T 3p1w_A 311 SYV 313 (475)
T ss_dssp GGC
T ss_pred Ccc
Confidence 653
No 27
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.45 E-value=3.5e-11 Score=113.72 Aligned_cols=250 Identities=13% Similarity=0.068 Sum_probs=142.3
Q ss_pred ccCCCHHHHHHHcCCChHHHHHHHHHHHhh----hccCCcccccHHHHHHHHHHHhhccCCceeeeecCCCcccchHHHH
Q 018523 28 QDGLTVQEWMRKQGVPDRVTTEVFIAMSKA----LNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIV 103 (354)
Q Consensus 28 ~d~~s~~~~l~~~g~~~~~~~~~~~~~~~~----~~~~~~~~~sa~~~~~~~~~~~~~~~g~~~~~~~Gg~~~~l~~~l~ 103 (354)
++.+|+.+|+++++.++...+ ++...+.. .+...|...++..+..++..+. ......+.+++||+ +.|+++|+
T Consensus 173 ~~~~s~~~~l~~~~~~~~l~~-~l~~~~~l~~~~~~~~~p~~~~~~~~~~~~~s~~-~~~~~~~~~p~gG~-~~l~~al~ 249 (453)
T 2bcg_G 173 LDKNTMDEVYYKFGLGNSTKE-FIGHAMALWTNDDYLQQPARPSFERILLYCQSVA-RYGKSPYLYPMYGL-GELPQGFA 249 (453)
T ss_dssp TTTSBHHHHHHHTTCCHHHHH-HHHHHTSCCSSSGGGGSBHHHHHHHHHHHHHHHH-HHSSCSEEEETTCT-THHHHHHH
T ss_pred cccCCHHHHHHHhCCCHHHHH-HHHHHHHhccCccccCCchHHHHHHHHHHHHHHH-hhcCCceEeeCCCH-HHHHHHHH
Confidence 578999999999877766444 54332221 0111232222221122211111 11123466899997 79999999
Q ss_pred HHHHHcCCEEEecceeeEEEecC-CCCEEEEEEcCCeEEEcCEEEEccChhhHhhhCCcchhhhHHHHHhhccC-CccEE
Q 018523 104 EHIQSLGGEVRLNSRVQKIELND-DGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLV-GVPVI 181 (354)
Q Consensus 104 ~~l~~~g~~i~~~~~V~~I~~~~-~g~v~~V~~~~g~~~~ad~VI~a~p~~~l~~ll~~~~~~~~~~~~~~~~~-~~~~~ 181 (354)
+.+++.|++|+++++|++|..+. ++++++|.+ +|+++.||+||++++++.- + +.+.. + ..
T Consensus 250 ~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~-~--------------l~~~~~~--~~ 311 (453)
T 2bcg_G 250 RLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPE-K--------------CKSTGQR--VI 311 (453)
T ss_dssp HHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGG-G--------------EEEEEEE--EE
T ss_pred HHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccch-h--------------hcccCCc--ce
Confidence 99999999999999999999852 566666777 5888999999999888621 1 11112 2 22
Q ss_pred EEEEEecccccc----ccCceeecc-----CcccchhcccccccccccCCCCcEEEEEe-cCCCCCCCCChHHHHHHHHH
Q 018523 182 NIHIWFDRKLKN----TYDHLLFSR-----SSLLSVYADMSLTCKEYYNPNQSMLELVF-APAEEWISCSDSEIIDATMK 251 (354)
Q Consensus 182 ~v~l~~~~~~~~----~~~~~~~~~-----~~~~~~~~~~s~~~~~~~~~g~~~l~~~~-~~~~~~~~~~~ee~~~~~~~ 251 (354)
...+.+++++.. ....+++.. .+...+ ..+|..+ ..+|+|++++.++. .+. .+.++ .+..
T Consensus 312 ~~~~i~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~v-~~~s~~d-~~aP~G~~~~~v~~~~~~-----~~~~~---~l~~ 381 (453)
T 2bcg_G 312 RAICILNHPVPNTSNADSLQIIIPQSQLGRKSDIYV-AIVSDAH-NVCSKGHYLAIISTIIET-----DKPHI---ELEP 381 (453)
T ss_dssp EEEEEESSCCTTSTTCSSEEEEECGGGTTCSSCEEE-EEEEGGG-TSSCTTCEEEEEEEECCS-----SCHHH---HTHH
T ss_pred eEEEEEccccCCCCCCccEEEEeCccccCCCCCEEE-EEeCCCC-CCCCCCcEEEEEEEecCC-----CCHHH---HHHH
Confidence 222226766531 112233332 121111 1122222 45788887766443 332 12222 2334
Q ss_pred HHHHhCCCCccccccccceeEEEEEEeCCCccccCCCCCCCCCCCCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHH
Q 018523 252 ELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQA 331 (354)
Q Consensus 252 ~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~ 331 (354)
.++++.|... ..+... . .|. |- ....-+|||++|++... ..+++++.+++.++++
T Consensus 382 ~~~~l~~~~~-------~~~~~~--~----~~~--~~-------~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 436 (453)
T 2bcg_G 382 AFKLLGPIEE-------KFMGIA--E----LFE--PR-------EDGSKDNIYLSRSYDAS---SHFESMTDDVKDIYFR 436 (453)
T ss_dssp HHGGGCSCSE-------EEEEEE--E----EEE--ES-------SCSTTTSEEECCCCCSC---SBSHHHHHHHHHHHHH
T ss_pred HHHHhhhHHH-------hhccch--h----eee--ec-------CCCCCCCEEECCCCCcc---ccHHHHHHHHHHHHHH
Confidence 4555555432 222221 1 111 11 01123799999997776 5789999999999999
Q ss_pred HH
Q 018523 332 IV 333 (354)
Q Consensus 332 il 333 (354)
|.
T Consensus 437 ~~ 438 (453)
T 2bcg_G 437 VT 438 (453)
T ss_dssp HH
T ss_pred HH
Confidence 98
No 28
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=99.43 E-value=3.6e-11 Score=116.52 Aligned_cols=172 Identities=18% Similarity=0.152 Sum_probs=116.3
Q ss_pred CCChHHHHHHhhhhhHHHhcccc---ccccccCCCHHHHHHHcCCChHHHHHHHHHHHhhhccCCcccccHHHHHHHHHH
Q 018523 1 MLTWPEKVKFAIGLLPAIIGGQA---YVEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNR 77 (354)
Q Consensus 1 ~ls~~~k~~~~~~~~~~~~~~~~---~~~~~d~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~~~~ 77 (354)
.||+.+|.++.+++.... ..+. .+..++.+|+.+||+++++++...+ ++...+ +++ +.+..++...+..+..
T Consensus 283 ~Lsl~EKr~L~kFl~~~~-~~~~~p~~~~~~d~~S~~d~L~~~~ls~~L~~-~L~~~l-al~--~~~~~pa~~~l~~i~~ 357 (650)
T 1vg0_A 283 QLTMVEKRMLMKFLTFCV-EYEEHPDEYRAYEGTTFSEYLKTQKLTPNLQY-FVLHSI-AMT--SETTSCTVDGLKATKK 357 (650)
T ss_dssp SSCHHHHHHHHHHHHHHH-TGGGCHHHHHTTTTSBHHHHHTTSSSCHHHHH-HHHHHT-TC----CCSCBHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHH-HhccChHHHhhhccCCHHHHHHHhCCCHHHHH-HHHHHH-hcc--CCCCCchhHHHHHHHH
Confidence 479999999987665432 2321 3457889999999999977777444 544322 222 1222455555433333
Q ss_pred Hhh--ccCC-ceeeeecCCCcccchHHHHHHHHHcCCEEEecceeeEEEecCC-CCEEEEEEcCCeEEEcCEEEEccChh
Q 018523 78 FLQ--EKHG-SKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDD-GTVKNFLLTNGNVIDGDAYVFATPVD 153 (354)
Q Consensus 78 ~~~--~~~g-~~~~~~~Gg~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~-g~v~~V~~~~g~~~~ad~VI~a~p~~ 153 (354)
++. .+.+ ..+.|+.||+ +.|+++|++.++..|++|+++++|++|..+++ |++++|...+|+++.||+||++. .
T Consensus 358 ~l~sl~~yg~sg~~yp~GG~-g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~--~ 434 (650)
T 1vg0_A 358 FLQCLGRYGNTPFLFPLYGQ-GELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIED--S 434 (650)
T ss_dssp HHHHTTSSSSSSEEEETTCT-THHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEG--G
T ss_pred HHHHHHhhccCceEEeCCch-hHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEECh--h
Confidence 321 1122 2578999998 79999999999999999999999999998643 77888887789999999999932 2
Q ss_pred hHhhhCCcchhhhHHHHHhhccCCccEEEEEEEeccccc
Q 018523 154 ILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLK 192 (354)
Q Consensus 154 ~l~~ll~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~ 192 (354)
. +|... ..++++..+.++.+.++.++.
T Consensus 435 ~----lp~~~--------~~~~~~~~v~R~i~i~~~pi~ 461 (650)
T 1vg0_A 435 Y----LSENT--------CSRVQYRQISRAVLITDGSVL 461 (650)
T ss_dssp G----BCTTT--------TTTCCCEEEEEEEEEESSCSS
T ss_pred h----cCHhH--------hccccccceEEEEEEecCCCC
Confidence 2 23211 112245567788888888764
No 29
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.43 E-value=4e-11 Score=112.67 Aligned_cols=251 Identities=13% Similarity=0.086 Sum_probs=148.1
Q ss_pred cccCCCHHHHHHHcCCChHHHHHHHHHHHhhhccCCcccccHHHHHHHHHHHhh--ccCC-ceeeeecCCCcccchHHHH
Q 018523 27 AQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQ--EKHG-SKMAFLDGNPPERLCLPIV 103 (354)
Q Consensus 27 ~~d~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~~~~~~~--~~~g-~~~~~~~Gg~~~~l~~~l~ 103 (354)
.++.+|+.+|+++++.++.+ +.++...+....+.++.+.|+...+..+..+.. ...+ ..+.+++||+ +.|+++|+
T Consensus 164 ~~~~~s~~~~l~~~~~~~~l-~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~g~~~~~~p~gG~-~~l~~~l~ 241 (433)
T 1d5t_A 164 DPQNTSMRDVYRKFDLGQDV-IDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARYGKSPYLYPLYGL-GELPQGFA 241 (433)
T ss_dssp CTTTSBHHHHHHHTTCCHHH-HHHHHHHTSCCSSSGGGGSBSHHHHHHHHHHHHSCCSSSCCSEEEETTCT-THHHHHHH
T ss_pred ccccCCHHHHHHHcCCCHHH-HHHHHHHHHhccCCCccCCCHHHHHHHHHHHHHHHHhcCCCcEEEeCcCH-HHHHHHHH
Confidence 35789999999998776664 445544322222345667776655443333322 1112 2367899997 79999999
Q ss_pred HHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhhHhhhCCcchhhhHHHHHhhccCCccEEEE
Q 018523 104 EHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINI 183 (354)
Q Consensus 104 ~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~v 183 (354)
+.+++.|++|+++++|++|..+ ++++++|.. +|++++||+||+|+++... .+.. +.+ ..+.+
T Consensus 242 ~~~~~~G~~i~~~~~V~~I~~~-~~~v~~v~~-~g~~~~ad~VV~a~~~~~~--~~~~----------~~~--~~~~~-- 303 (433)
T 1d5t_A 242 RLSAIYGGTYMLNKPVDDIIME-NGKVVGVKS-EGEVARCKQLICDPSYVPD--RVRK----------AGQ--VIRII-- 303 (433)
T ss_dssp HHHHHHTCCCBCSCCCCEEEEE-TTEEEEEEE-TTEEEECSEEEECGGGCGG--GEEE----------EEE--EEEEE--
T ss_pred HHHHHcCCEEECCCEEEEEEEe-CCEEEEEEE-CCeEEECCEEEECCCCCcc--cccc----------cCc--ceeEE--
Confidence 9999999999999999999985 556755664 7889999999999988632 1110 111 11222
Q ss_pred EEEecccccc----ccCceeecc-----CcccchhcccccccccccCCCCcEEEEEe-cCCCCCCCCChHHHHHHHHHHH
Q 018523 184 HIWFDRKLKN----TYDHLLFSR-----SSLLSVYADMSLTCKEYYNPNQSMLELVF-APAEEWISCSDSEIIDATMKEL 253 (354)
Q Consensus 184 ~l~~~~~~~~----~~~~~~~~~-----~~~~~~~~~~s~~~~~~~~~g~~~l~~~~-~~~~~~~~~~~ee~~~~~~~~l 253 (354)
. .+++++.. ..+.+++.. .+...+. .+| .++..+|+|++++.++. .+. .+.++ .+...+
T Consensus 304 ~-il~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~-~~s-~d~~~aP~G~~~~~~~~~~p~-----~~~~~---~l~~~~ 372 (433)
T 1d5t_A 304 C-ILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVC-MIS-YAHNVAAQGKYIAIASTTVET-----TDPEK---EVEPAL 372 (433)
T ss_dssp E-EESSCCTTSTTCSSEEEEECGGGTTCSSCEEEE-EEE-GGGTSSCTTCEEEEEEEECCS-----SCHHH---HTHHHH
T ss_pred E-EEcCcccccCCCceEEEEeCccccCCCCCEEEE-EEC-CCCcccCCCCEEEEEEEecCC-----CCHHH---HHHHHH
Confidence 2 26665431 122333332 1222111 233 44566888888766443 332 12222 344455
Q ss_pred HHhCCCCccccccccceeEEEEEEeCCCccccCCCCCCCCCCCCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHH
Q 018523 254 AKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIV 333 (354)
Q Consensus 254 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il 333 (354)
+++.|... ..+.... .| .|.. ...-+|||++++.-.. ..+|+++.+++..-++|.
T Consensus 373 ~~l~~~~~-------~~~~~~~------~~--~~~~-------~~~~~~~~~~~~~d~~---~~~e~~~~~~~~~~~~~~ 427 (433)
T 1d5t_A 373 GLLEPIDQ-------KFVAISD------LY--EPID-------DGSESQVFCSCSYDAT---THFETTCNDIKDIYKRMA 427 (433)
T ss_dssp TTTCSCSE-------EEEEEEE------EE--EESC-------CSTTTCEEECCCCCSC---SBSHHHHHHHHHHHHHHH
T ss_pred HHhhhHHh-------heeccce------ee--eecC-------CCCCCCEEECCCCCcc---ccHHHHHHHHHHHHHHHh
Confidence 55555432 2222221 11 1110 1123799999986665 467999999988888875
No 30
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.38 E-value=3.6e-15 Score=138.77 Aligned_cols=145 Identities=11% Similarity=-0.023 Sum_probs=100.9
Q ss_pred ccCCCHHHHHHHcCCChHHHHHHHHHHHhhhccCCcccccHHHHHHHHHHHh-hccCC-cee-eeecCCCcccchHHHHH
Q 018523 28 QDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFL-QEKHG-SKM-AFLDGNPPERLCLPIVE 104 (354)
Q Consensus 28 ~d~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~~~~~~-~~~~g-~~~-~~~~Gg~~~~l~~~l~~ 104 (354)
.+++|+.+|+.++ ++++.++.++.|++...|+.+++++|+.++......+. .+... ..+ ++|+||+ ++|+++|++
T Consensus 136 ~~~~s~~e~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~p~gG~-~~l~~~l~~ 213 (399)
T 1v0j_A 136 ADAQNLEEKAISL-IGRPLYEAFVKGYTAKQWQTDPKELPAANITRLPVRYTFDNRYFSDTYEGLPTDGY-TAWLQNMAA 213 (399)
T ss_dssp TC----CCHHHHH-HCHHHHHHHTHHHHHHHHTSCGGGSCGGGCSCCCCCSSSCCCSCCCSEEECBTTHH-HHHHHHHTC
T ss_pred CCcccHHHHHHHH-HhHHHHHHHHHHHHHhhcCCChhhcChHhhhcceeEeccccchhhhhhcccccccH-HHHHHHHHh
Confidence 4678999999997 89999999999999999999999999877621100010 11111 124 4899997 788888874
Q ss_pred HHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEE-EcCEEEEccChhhHhhhCCcchhhhHHHHHhhccCCccEEEE
Q 018523 105 HIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVI-DGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINI 183 (354)
Q Consensus 105 ~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~-~ad~VI~a~p~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~v 183 (354)
+.|++|++|++|++|..+ | + ++ +||+||+|+|+..+.++ .+.+++|.+...+
T Consensus 214 ---~~g~~I~l~~~V~~I~~~----v------~--~~~~aD~VI~t~p~~~l~~~------------~l~~l~y~s~~~~ 266 (399)
T 1v0j_A 214 ---DHRIEVRLNTDWFDVRGQ----L------R--PGSPAAPVVYTGPLDRYFDY------------AEGRLGWRTLDFE 266 (399)
T ss_dssp ---STTEEEECSCCHHHHHHH----H------T--TTSTTCCEEECSCHHHHTTT------------TTCCCCEEEEEEE
T ss_pred ---cCCeEEEECCchhhhhhh----h------h--hcccCCEEEECCcHHHHHhh------------hhCCCCcceEEEE
Confidence 458999999999999742 2 1 34 69999999999988765 1346778887888
Q ss_pred EEEeccccccccCceeec
Q 018523 184 HIWFDRKLKNTYDHLLFS 201 (354)
Q Consensus 184 ~l~~~~~~~~~~~~~~~~ 201 (354)
.+.++.+...+...+.+.
T Consensus 267 ~~~~~~~~~~~~~~~~~~ 284 (399)
T 1v0j_A 267 VEVLPIGDFQGTAVMNYN 284 (399)
T ss_dssp EEEESSSCSSSSSEEEEC
T ss_pred EEEEccccCCCCeEEEeC
Confidence 888877644333333443
No 31
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.34 E-value=3.5e-13 Score=124.65 Aligned_cols=127 Identities=13% Similarity=0.088 Sum_probs=96.0
Q ss_pred ccCCCHHHHHHHcCCChHHHHHHHHHHHhhhccCCcccccHHHHHHHHHHH-hhccC-Ccee-eeecCCCcccchHHHHH
Q 018523 28 QDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRF-LQEKH-GSKM-AFLDGNPPERLCLPIVE 104 (354)
Q Consensus 28 ~d~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~~~~~-~~~~~-g~~~-~~~~Gg~~~~l~~~l~~ 104 (354)
.+++|+.+|+.++ +++++++.++.|++...|+.+++++|+.++......+ ..+.. ...+ .+|+||+ ++|+++|++
T Consensus 130 ~~~~sl~e~~~~~-~g~~~~~~~~~p~~~~~~~~~~~~ls~~~~~r~~~~~~~~~~~~~~~~~~~p~gG~-~~l~~~l~~ 207 (384)
T 2bi7_A 130 ADPQTFEEEALRF-IGKELYEAFFKGYTIKQWGMQPSELPASILKRLPVRFNYDDNYFNHKFQGMPKCGY-TQMIKSILN 207 (384)
T ss_dssp SSCCBHHHHHHHH-HCHHHHHHHTHHHHHHHHSSCGGGSBGGGCCSCCCCSSSCCCSCCCSEEEEETTHH-HHHHHHHHC
T ss_pred CCCcCHHHHHHHh-hcHHHHHHHHHHHHHHHhCCCHHHhCHHHHhccccccccccccccccccEEECcCH-HHHHHHHHh
Confidence 4789999999998 8999999999999999999999999988652110000 01110 1123 4899997 788888874
Q ss_pred HHHHcCCEEEecceee-EEEecCCCCEEEEEEcCCeEEEcCEEEEccChhhHhhhCCcchhhhHHHHHhhccCCccEEEE
Q 018523 105 HIQSLGGEVRLNSRVQ-KIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINI 183 (354)
Q Consensus 105 ~l~~~g~~i~~~~~V~-~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~v 183 (354)
+.|++|+++++|+ +|.. .||+||+|+|+..+.+++ +.+++|.+...+
T Consensus 208 ---~~g~~I~l~~~V~~~i~~-----------------~~d~VI~a~p~~~~~~~~------------lg~l~y~s~~~v 255 (384)
T 2bi7_A 208 ---HENIKVDLQREFIVEERT-----------------HYDHVFYSGPLDAFYGYQ------------YGRLGYRTLDFK 255 (384)
T ss_dssp ---STTEEEEESCCCCGGGGG-----------------GSSEEEECSCHHHHTTTT------------TCCCCEEEEEEE
T ss_pred ---cCCCEEEECCeeehhhhc-----------------cCCEEEEcCCHHHHHHhh------------cCCCCcceEEEE
Confidence 4588999999998 7752 289999999999987752 345678887778
Q ss_pred EEEec
Q 018523 184 HIWFD 188 (354)
Q Consensus 184 ~l~~~ 188 (354)
.+.++
T Consensus 256 ~~~~d 260 (384)
T 2bi7_A 256 KFTYQ 260 (384)
T ss_dssp EEEEE
T ss_pred EEEeC
Confidence 88887
No 32
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.33 E-value=1e-12 Score=120.87 Aligned_cols=143 Identities=13% Similarity=0.064 Sum_probs=103.3
Q ss_pred cccCCCHHHHHHHcCCChHHHHHHHHHHHhhhccCCcccccHHHHHHHHHHH-hhccC-Ccee-eeecCCCcccchHHHH
Q 018523 27 AQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRF-LQEKH-GSKM-AFLDGNPPERLCLPIV 103 (354)
Q Consensus 27 ~~d~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~~~~~-~~~~~-g~~~-~~~~Gg~~~~l~~~l~ 103 (354)
..+++|+.+|+.++ +++++++.++.|++..+|+.+|+++|+.++......+ ..+.. ...+ ++|+||+ ++|+++|+
T Consensus 125 ~~~~~s~~~~~~~~-~g~~~~~~~~~p~~~~~~~~~~~~lsa~~~~~l~~~~~~~~~~~~~~~~~~p~gG~-~~l~~~l~ 202 (367)
T 1i8t_A 125 DKVPENLEEQAISL-VGEDLYQALIKGYTEKQWGRSAKELPAFIIKRIPVRFTFDNNYFSDRYQGIPVGGY-TKLIEKML 202 (367)
T ss_dssp CCCCCSHHHHHHHH-HHHHHHHHHTHHHHHHHHSSCGGGSCTTSSCCCCBCSSSCCCSCCCSEEECBTTCH-HHHHHHHH
T ss_pred CCCCccHHHHHHHH-HhHHHHHHHHHHHHhhhhCCChHHcCHHHHhhceeeeccccccccchhhcccCCCH-HHHHHHHh
Confidence 34789999999998 9999999999999999999999999987652100000 01110 1123 4899997 78888887
Q ss_pred HHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhhHhhhCCcchhhhHHHHHhhccCCccEEEE
Q 018523 104 EHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINI 183 (354)
Q Consensus 104 ~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~v 183 (354)
+ |++|++|++|++|.. . + ++.||+||+|+|+..+..+ .+.+++|.+...+
T Consensus 203 ~-----g~~i~l~~~V~~i~~---~-v---------~~~~D~VV~a~p~~~~~~~------------~l~~l~y~s~~~v 252 (367)
T 1i8t_A 203 E-----GVDVKLGIDFLKDKD---S-L---------ASKAHRIIYTGPIDQYFDY------------RFGALEYRSLKFE 252 (367)
T ss_dssp T-----TSEEECSCCGGGSHH---H-H---------HTTEEEEEECSCHHHHTTT------------TTCCCCEEEEEEE
T ss_pred c-----CCEEEeCCceeeech---h-h---------hccCCEEEEeccHHHHHHH------------hhCCCCCceEEEE
Confidence 4 689999999998863 1 2 1358999999999887643 1446788888888
Q ss_pred EEEeccccccccCceeec
Q 018523 184 HIWFDRKLKNTYDHLLFS 201 (354)
Q Consensus 184 ~l~~~~~~~~~~~~~~~~ 201 (354)
.+.++.+..++..++.+.
T Consensus 253 ~~~~d~~~~~~~~~~~~~ 270 (367)
T 1i8t_A 253 TERHEFPNFQGNAVINFT 270 (367)
T ss_dssp EEEESSSCSSSSSEEEEC
T ss_pred EEEeccccCCCCeEEEeC
Confidence 898987644444444444
No 33
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.17 E-value=6.3e-11 Score=109.28 Aligned_cols=233 Identities=13% Similarity=0.102 Sum_probs=145.4
Q ss_pred cccccCCCHHHHHHHcCCChHHHHHHHHHHHhhhccCCcccccHHHHHHHHHHHhh--ccC-Ccee-eeecCCCcccchH
Q 018523 25 VEAQDGLTVQEWMRKQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQ--EKH-GSKM-AFLDGNPPERLCL 100 (354)
Q Consensus 25 ~~~~d~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~~~~~~~--~~~-g~~~-~~~~Gg~~~~l~~ 100 (354)
+...+++|++||+.++ +++++++.+++|++.+.|+.+++++|+.++.+ +..... .+. ...+ ++|+||+ .+|++
T Consensus 151 ~~~~~~~s~~e~~~~~-~G~~~~e~~~~py~~k~~~~~~~~Lsa~~~~R-vp~~~~~d~~yf~~~~qg~P~gGy-~~l~e 227 (397)
T 3hdq_A 151 EKVEQVRTSEDVVVSK-VGRDLYNKFFRGYTRKQWGLDPSELDASVTAR-VPTRTNRDNRYFADTYQAMPLHGY-TRMFQ 227 (397)
T ss_dssp CCCSSCCBHHHHHHHH-HHHHHHHHHTHHHHHHHHSSCGGGSBTTTGGG-SCCCSSCCCBSCCCSEEEEETTCH-HHHHH
T ss_pred cCCCCCcCHHHHHHHh-cCHHHHHHHHHHHhCchhCCCHHHHHHHHHHh-cCcccccCccchhhhheeccCCCH-HHHHH
Confidence 4457889999999998 99999999999999999999999999975532 110011 110 1123 5899998 78888
Q ss_pred HHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhhHhhhCCcchhhhHHHHHhhccCCccE
Q 018523 101 PIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPV 180 (354)
Q Consensus 101 ~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~l~~ll~~~~~~~~~~~~~~~~~~~~~ 180 (354)
+|+ ++.|++|++|++|+++ +.++.+|+||+|+|+..+... ...+++|.+.
T Consensus 228 ~l~---~~~g~~V~l~~~v~~~---------------~~~~~~d~vI~T~P~d~~~~~------------~~g~L~yrsl 277 (397)
T 3hdq_A 228 NML---SSPNIKVMLNTDYREI---------------ADFIPFQHMIYTGPVDAFFDF------------CYGKLPYRSL 277 (397)
T ss_dssp HHT---CSTTEEEEESCCGGGT---------------TTTSCEEEEEECSCHHHHTTT------------TTCCCCEEEE
T ss_pred HHH---hccCCEEEECCeEEec---------------cccccCCEEEEcCCHHHHHHH------------hcCCCCCceE
Confidence 876 3569999999999732 223468999999999887431 1346778888
Q ss_pred EEEEEEeccccccccCceeecc-CcccchhcccccccccccCCCCcEEEEEecC-C-CCCCCCChHHHHHHHHHHHHHhC
Q 018523 181 INIHIWFDRKLKNTYDHLLFSR-SSLLSVYADMSLTCKEYYNPNQSMLELVFAP-A-EEWISCSDSEIIDATMKELAKLF 257 (354)
Q Consensus 181 ~~v~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~~~~~g~~~l~~~~~~-~-~~~~~~~~ee~~~~~~~~l~~~~ 257 (354)
..+.+.++.+...+..++.+++ +|+.-+. ++++. +. .+.++++++.-+.. . +..=...+++-.+.+.+.++.
T Consensus 278 ~~~~~~~~~~~~~~~~~vn~~d~~p~tRi~-e~k~~-~~-~~~~~t~i~~Ey~~~~~~pyYpv~~~~~~~~~~~y~~~-- 352 (397)
T 3hdq_A 278 EFRHETHDTEQLLPTGTVNYPNDYAYTRVS-EFKHI-TG-QRHHQTSVVYEYPRAEGDPYYPVPRPENAELYKKYEAL-- 352 (397)
T ss_dssp EEEEEEESSSCSCSSSEEECSSSSSCSEEE-EHHHH-HC-CCCSSEEEEEEEEESSSSCCEECCSHHHHHHHHHHHHH--
T ss_pred EEEEEEeccccCCCCeEEEeCCCCcceEEE-eeccc-CC-CCCCCEEEEEEECCCCCccccccCchhHHHHHHHHHHH--
Confidence 8888999876554444555553 2443332 22221 11 12345665543321 0 110011112111111111110
Q ss_pred CCCccccccccceeEEEEEEeCCCccccCCCCCCCCCCCCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHHH
Q 018523 258 PDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQD 335 (354)
Q Consensus 258 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~~ 335 (354)
....+||+|+|..-...| -.|+.+|.+|+.+++++++.
T Consensus 353 ---------------------------------------a~~~~~v~~~GRlg~y~Y-~~md~~i~~al~~~~~~~~~ 390 (397)
T 3hdq_A 353 ---------------------------------------ADAAQDVTFVGRLATYRY-YNMDQVVAQALATFRRLQGQ 390 (397)
T ss_dssp ---------------------------------------HHHCTTEEECSTTTTTCC-CCHHHHHHHHHHHHHHHHC-
T ss_pred ---------------------------------------HhcCCCEEEcccceEEEe-ccHHHHHHHHHHHHHHHhcc
Confidence 001357888887766666 58999999999999988753
No 34
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.08 E-value=2e-11 Score=100.24 Aligned_cols=130 Identities=18% Similarity=0.114 Sum_probs=85.8
Q ss_pred ceeeccCcccchhcccccccccccCCCC-cEEE-EEec-CCCCCCCCChHHHHHHHHHHHHHhCCCCccccccccceeEE
Q 018523 197 HLLFSRSSLLSVYADMSLTCKEYYNPNQ-SMLE-LVFA-PAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKY 273 (354)
Q Consensus 197 ~~~~~~~~~~~~~~~~s~~~~~~~~~g~-~~l~-~~~~-~~~~~~~~~~ee~~~~~~~~l~~~~p~~~~~~~~~~~~~~~ 273 (354)
+...++.|+..++ +.|... .+++. .+|. ++.. .+..+..++++++++.++++|.++|+.... .+...
T Consensus 12 g~~~td~pi~~i~-d~S~~~---~~~g~~~~L~~~~~g~~A~~~~~l~~~e~~~~~l~~L~~~~g~~~~------~~~~~ 81 (181)
T 2e1m_C 12 GGSTTDNPNRFMY-YPSHPV---PGTQGGVVLAAYSWSDDAARWDSFDDAERYGYALENLQSVHGRRIE------VFYTG 81 (181)
T ss_dssp CEEEESSTTBEEE-CCSSCC---TTCSCEEEEEEEEEHHHHHHHTTSCTTTTHHHHHHHHHHHHCGGGG------GTEEE
T ss_pred eeEecCCCeEEEE-ECCCCc---CCCCCCEEEEEEcCChHHHHHHcCCHHHHHHHHHHHHHHHhCCCcH------hhccC
Confidence 4455566655554 344211 11333 3444 4433 355677789999999999999999942111 23344
Q ss_pred --EEEEeCC-----Cccc-cCCCCC-CCCCCCCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHHHhh
Q 018523 274 --HVVKTPR-----SVYK-TIPNCE-PCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYV 337 (354)
Q Consensus 274 --~~~~~~~-----~~~~-~~~g~~-~~~~~~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~~~~ 337 (354)
..++|.. +.|. ..||+. ...+.++.|.++|||||++++. |+++|+||+.||.+||++|++.++
T Consensus 82 ~~~~~~W~~dp~~~Ga~s~~~pg~~~~~~~~l~~p~grl~FAGe~ts~-~~g~~eGAl~SG~raA~~i~~~l~ 153 (181)
T 2e1m_C 82 AGQTQSWLRDPYACGEAAVYTPHQMTAFHLDVVRPEGPVYFAGEHVSL-KHAWIEGAVETAVRAAIAVNEAPV 153 (181)
T ss_dssp EEEEEESSSCTTTSSSEECCCTTHHHHHHHHHHSCBTTEEECSGGGTT-STTSHHHHHHHHHHHHHHHHTCCC
T ss_pred cceecccCCCCCCCCcccCcCCCchHHHHHHHhCCCCcEEEEEHHHcC-CccCHHHHHHHHHHHHHHHHHHhc
Confidence 5566643 3454 346642 2334556778999999999996 779999999999999999998775
No 35
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.13 E-value=4.9e-05 Score=71.00 Aligned_cols=58 Identities=12% Similarity=0.224 Sum_probs=50.2
Q ss_pred ccchHHHHHHHHHcCCEEEecc---eeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhh
Q 018523 96 ERLCLPIVEHIQSLGGEVRLNS---RVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 154 (354)
Q Consensus 96 ~~l~~~l~~~l~~~g~~i~~~~---~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 154 (354)
..+...|.+.+++.|++|++++ +|++|..+ ++.+++|++.+|++++||.||+|+..+.
T Consensus 161 ~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~-~~~v~gV~t~~G~~i~Ad~VV~AtG~~s 221 (438)
T 3dje_A 161 RNALVAAAREAQRMGVKFVTGTPQGRVVTLIFE-NNDVKGAVTADGKIWRAERTFLCAGASA 221 (438)
T ss_dssp HHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEE-TTEEEEEEETTTEEEECSEEEECCGGGG
T ss_pred HHHHHHHHHHHHhcCCEEEeCCcCceEEEEEec-CCeEEEEEECCCCEEECCEEEECCCCCh
Confidence 3678888888888999999999 99999985 5567679998898899999999998864
No 36
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.03 E-value=1.2e-05 Score=73.31 Aligned_cols=112 Identities=13% Similarity=0.162 Sum_probs=69.8
Q ss_pred ccccCCCHHHHHH-HcCCChHHHHHHHHHHHhhhccCCcccccHHHHHHHHHHHhhccCCceeeeecCCCcccchHHHHH
Q 018523 26 EAQDGLTVQEWMR-KQGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVE 104 (354)
Q Consensus 26 ~~~d~~s~~~~l~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~~~~~~~~~~g~~~~~~~Gg~~~~l~~~l~~ 104 (354)
..+|++|+.+||+ +.++++..++ ++..+. ......++|+..++... +.-..+..+..+.||+ ++|+++|++
T Consensus 257 ~~lD~~S~~~~L~~~~g~s~~~~~-~~~~~~---~~~~~~~~s~l~~l~~~---~~~~~~~~~~~i~GG~-~~l~~~l~~ 328 (376)
T 2e1m_A 257 RDFDGYSMGRFLREYAEFSDEAVE-AIGTIE---NMTSRLHLAFFHSFLGR---SDIDPRATYWEIEGGS-RMLPETLAK 328 (376)
T ss_dssp HHHTTCBHHHHHHHTSCCCHHHHH-HHHHHT---TCTTTTTSBHHHHHHHC---SCSCTTCCEEEETTCT-THHHHHHHH
T ss_pred HHHhCCCHHHHHhhccCCCHHHHH-HHHhhc---CccccchhhHHHHHHHh---hhhccCCceEEECCcH-HHHHHHHHH
Confidence 3579999999999 7889988776 444443 12333467777766532 1111233466778887 899999997
Q ss_pred HHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEcc
Q 018523 105 HIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFAT 150 (354)
Q Consensus 105 ~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~ 150 (354)
.+ +.+|++|++|++|..+++| +. |...+......-+|++.+
T Consensus 329 ~l---~~~i~l~~~V~~I~~~~~g-v~-v~~~~~~~~~g~~~~~~~ 369 (376)
T 2e1m_A 329 DL---RDQIVMGQRMVRLEYYDPG-RD-GHHGELTGPGGPAVAIQT 369 (376)
T ss_dssp HG---GGTEECSEEEEEEEECCCC---------------CCEEEEE
T ss_pred hc---CCcEEecCeEEEEEECCCc-eE-EEeCCCcCCCCCeeEEEe
Confidence 66 6799999999999997666 32 333333334556777644
No 37
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=97.98 E-value=0.00036 Score=64.21 Aligned_cols=199 Identities=14% Similarity=0.172 Sum_probs=105.3
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhh--HhhhCCcchhhhHHHHHhhc
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI--LKLQLPENWKEMAYFKRLEK 174 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~--l~~ll~~~~~~~~~~~~~~~ 174 (354)
.+.+.|.+.+++.|++|+++++|++|..+ ++++.+|++.+| ++++|.||+|+.... +...+.. .
T Consensus 175 ~~~~~l~~~~~~~g~~i~~~~~v~~i~~~-~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~l~~~~g~------------~ 240 (405)
T 2gag_B 175 HVAWAFARKANEMGVDIIQNCEVTGFIKD-GEKVTGVKTTRG-TIHAGKVALAGAGHSSVLAEMAGF------------E 240 (405)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEETTC-CEEEEEEEECCGGGHHHHHHHHTC------------C
T ss_pred HHHHHHHHHHHHCCCEEEcCCeEEEEEEe-CCEEEEEEeCCc-eEECCEEEECCchhHHHHHHHcCC------------C
Confidence 57778888888899999999999999985 455667888777 789999999988753 2221110 0
Q ss_pred cCCccEEEEEEEeccccccccCceeeccCcccchhcccccccccccCCCCcEEEEEecCCCCCCCCChHHHHHHHHHHHH
Q 018523 175 LVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELA 254 (354)
Q Consensus 175 ~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~g~~~l~~~~~~~~~~~~~~~ee~~~~~~~~l~ 254 (354)
++..+.....+.. ++........++.... .++. .| .+.+..+++.............+++..+.+++.+.
T Consensus 241 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~y~-----~p--~~~g~~~ig~~~~~~~~~~~~~~~~~~~~l~~~~~ 310 (405)
T 2gag_B 241 LPIQSHPLQALVS-ELFEPVHPTVVMSNHI--HVYV-----SQ--AHKGELVMGAGIDSYNGYGQRGAFHVIQEQMAAAV 310 (405)
T ss_dssp CCEEEEEEEEEEE-EEBCSCCCSEEEETTT--TEEE-----EE--CTTSEEEEEEEECSSCCCSSCCCTHHHHHHHHHHH
T ss_pred CCccccceeEEEe-cCCccccCceEEeCCC--cEEE-----EE--cCCCcEEEEeccCCCCccccCCCHHHHHHHHHHHH
Confidence 1111111111112 2221111112211110 0110 01 01222333333221112222344566788999999
Q ss_pred HhCCCCccccccccceeEEEEEEeCCCccccCCCCCCCCCCC-CCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHH
Q 018523 255 KLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQ-RSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIV 333 (354)
Q Consensus 255 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il 333 (354)
+++|.+.. .++...+ . +.+..+++. .|.. ..|.+|+|++..+.+ .++.-|...|+.+|+.|.
T Consensus 311 ~~~p~l~~-----~~~~~~w-~----g~~~~t~d~---~p~ig~~~~~~l~~~~G~~g----~G~~~a~~~g~~la~~i~ 373 (405)
T 2gag_B 311 ELFPIFAR-----AHVLRTW-G----GIVDTTMDA---SPIISKTPIQNLYVNCGWGT----GGFKGTPGAGFTLAHTIA 373 (405)
T ss_dssp HHCGGGGG-----CEECEEE-E----EEEEEETTS---CCEEEECSSBTEEEEECCGG----GCSTTHHHHHHHHHHHHH
T ss_pred HhCCcccc-----CCcceEE-e----eccccCCCC---CCEecccCCCCEEEEecCCC----chhhHHHHHHHHHHHHHh
Confidence 99997642 1222221 1 111223332 1111 112578998875443 357777888999999998
Q ss_pred HHh
Q 018523 334 QDY 336 (354)
Q Consensus 334 ~~~ 336 (354)
...
T Consensus 374 g~~ 376 (405)
T 2gag_B 374 NDE 376 (405)
T ss_dssp HTS
T ss_pred CCC
Confidence 653
No 38
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.94 E-value=9.4e-06 Score=61.96 Aligned_cols=105 Identities=10% Similarity=0.035 Sum_probs=53.1
Q ss_pred eEEEcCEEEEccChhhHhhh-CCcchhhhHHHHHhhccCCccEEEEEEEeccccccccCceeeccCcccchhcccccccc
Q 018523 139 NVIDGDAYVFATPVDILKLQ-LPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCK 217 (354)
Q Consensus 139 ~~~~ad~VI~a~p~~~l~~l-l~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 217 (354)
++++||+||+|+|+.+++.+ +.+. .|....++++++++....|+.+.|+++||+.-+ ..+ +.+..
T Consensus 4 ~~~~Ad~VIvTvP~~vL~~I~F~P~-LP~~k~~Ai~~l~~g~~~Kv~l~f~~~FW~~~~-~~g----------d~s~~-- 69 (130)
T 2e1m_B 4 QTWTGDLAIVTIPFSSLRFVKVTPP-FSYKKRRAVIETHYDQATKVLLEFSRRWWEFTE-ADW----------KRELD-- 69 (130)
T ss_dssp EEEEESEEEECSCHHHHTTSEEESC-CCHHHHHHHHHCCEECEEEEEEEESSCGGGCCH-HHH----------HHHHH--
T ss_pred eEEEcCEEEEcCCHHHHhcCcCCCC-CCHHHHHHHHhCCCcceeEEEEEECCCCCCCCC-ccc----------cccCC--
Confidence 47899999999999999986 2222 355677888999999999999999999996311 100 00100
Q ss_pred cccCCCCcEEEEEe-c-CCCCCCCCChHHHHHHHHHHHHHhCCCC
Q 018523 218 EYYNPNQSMLELVF-A-PAEEWISCSDSEIIDATMKELAKLFPDE 260 (354)
Q Consensus 218 ~~~~~g~~~l~~~~-~-~~~~~~~~~~ee~~~~~~~~l~~~~p~~ 260 (354)
+ ..+ +.++.++. + .+.+|..+++ +..+.++..|..++|+.
T Consensus 70 ~-~~p-g~l~~f~~wg~~A~~~~~l~~-~~r~~~~~~l~~~~p~~ 111 (130)
T 2e1m_B 70 A-IAP-GLYDYYQQWGEDDAEAALALP-QSVRNLPTGLLGAHPSV 111 (130)
T ss_dssp H-HST-THHHHHHHHCCCSCCCC----------------------
T ss_pred C-CCC-eEEEEecccCHHHHHHhcCCH-HHHHHHHHHHHHhCCCC
Confidence 0 001 12222331 2 3567777766 44578899999999965
No 39
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.83 E-value=0.0021 Score=58.49 Aligned_cols=202 Identities=13% Similarity=0.162 Sum_probs=106.0
Q ss_pred ccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhh--HhhhCCcchhhhHHHHHhh
Q 018523 96 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI--LKLQLPENWKEMAYFKRLE 173 (354)
Q Consensus 96 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~--l~~ll~~~~~~~~~~~~~~ 173 (354)
..+...|.+.+++.|++|+.+++|++|..+ ++.+++|++.+| +++||.||+|+..+. +...+....
T Consensus 149 ~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~-~~~v~gv~~~~g-~i~a~~VV~A~G~~s~~l~~~~g~~~---------- 216 (382)
T 1y56_B 149 FEATTAFAVKAKEYGAKLLEYTEVKGFLIE-NNEIKGVKTNKG-IIKTGIVVNATNAWANLINAMAGIKT---------- 216 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEETTE-EEECSEEEECCGGGHHHHHHHHTCCS----------
T ss_pred HHHHHHHHHHHHHCCCEEECCceEEEEEEE-CCEEEEEEECCc-EEECCEEEECcchhHHHHHHHcCCCc----------
Confidence 356777888888899999999999999985 455756888766 899999999988754 222111000
Q ss_pred ccCCccEEEEEEEeccccccccC-ceeeccCcccchhcccccccccccCCCCcEEEEE-ecCCCCCCCCChHHHHHHHHH
Q 018523 174 KLVGVPVINIHIWFDRKLKNTYD-HLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELV-FAPAEEWISCSDSEIIDATMK 251 (354)
Q Consensus 174 ~~~~~~~~~v~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~g~~~l~~~-~~~~~~~~~~~~ee~~~~~~~ 251 (354)
.++..+.-...+.++ +...... ..++... ...++. . | .+.+ .+++.. ......+....+++..+.+++
T Consensus 217 ~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~-~~~~y~--~---p--~~~g-~~iG~~~~~~~~~~~~~~~~~~~~~l~~ 286 (382)
T 1y56_B 217 KIPIEPYKHQAVITQ-PIKRGTINPMVISFK-YGHAYL--T---Q--TFHG-GIIGGIGYEIGPTYDLTPTYEFLREVSY 286 (382)
T ss_dssp CCCCEEEEEEEEEEC-CCSTTSSCSEEEEST-TTTEEE--E---C--CSSS-CCEEECSCCBSSCCCCCCCHHHHHHHHH
T ss_pred CcCCCeeEeEEEEEc-cCCcccCCCeEEecC-CCeEEE--E---E--eCCe-EEEecCCCCCCCCCCCCCCHHHHHHHHH
Confidence 011111111122222 2111011 1222111 001110 0 1 1122 223321 111112222345666788899
Q ss_pred HHHHhCCCCccccccccceeEEEEEEeCCCccccCCCCCCCCCCC-CCC-CCceEEeeccccCCCCCchhHHHHHHHHHH
Q 018523 252 ELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQ-RSP-VEGFYLAGDYTKQKYLASMEGAVLSGKLCA 329 (354)
Q Consensus 252 ~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~-~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa 329 (354)
.+.+++|.+.. .++... +. +....+++. .|.. ..| .+|+|++..+.+ .++.-|...|+.+|
T Consensus 287 ~~~~~~p~l~~-----~~~~~~-~~----g~r~~t~d~---~p~ig~~~~~~~~~~~~G~~g----~G~~~a~~~g~~la 349 (382)
T 1y56_B 287 YFTKIIPALKN-----LLILRT-WA----GYYAKTPDS---NPAIGRIEELNDYYIAAGFSG----HGFMMAPAVGEMVA 349 (382)
T ss_dssp HHHHHCGGGGG-----SEEEEE-EE----EEEEECTTS---CCEEEEESSSBTEEEEECCTT----CHHHHHHHHHHHHH
T ss_pred HHHHhCCCcCC-----CCceEE-EE----eccccCCCC---CcEeccCCCCCCEEEEEecCc----chHhhhHHHHHHHH
Confidence 99999997642 123221 11 112223332 1211 112 579998864433 37888888999999
Q ss_pred HHHHHHh
Q 018523 330 QAIVQDY 336 (354)
Q Consensus 330 ~~il~~~ 336 (354)
+.|....
T Consensus 350 ~~i~~~~ 356 (382)
T 1y56_B 350 ELITKGK 356 (382)
T ss_dssp HHHHHSS
T ss_pred HHHhCCC
Confidence 9998754
No 40
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=97.82 E-value=0.0005 Score=62.15 Aligned_cols=58 Identities=10% Similarity=0.138 Sum_probs=48.2
Q ss_pred ccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCC--eEEEcCEEEEccChhh
Q 018523 96 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG--NVIDGDAYVFATPVDI 154 (354)
Q Consensus 96 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g--~~~~ad~VI~a~p~~~ 154 (354)
..+.+.|.+.+++.|++|+++++|++|..++++.+ .|.+.+| .+++||.||+|+..+.
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 150 HALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGF-ELDFGGAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSE-EEEECTTSCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceE-EEEECCCceeEEEeCEEEECCCcch
Confidence 46788888888899999999999999998655535 4888777 4799999999998764
No 41
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=97.74 E-value=0.0015 Score=59.44 Aligned_cols=197 Identities=16% Similarity=0.165 Sum_probs=106.4
Q ss_pred ccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhhH--hhhCCcchhhhHHHHHhh
Q 018523 96 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDIL--KLQLPENWKEMAYFKRLE 173 (354)
Q Consensus 96 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~l--~~ll~~~~~~~~~~~~~~ 173 (354)
..+.+.|.+.+++.|++|+++++|++|..+ ++.+ +|++.+| +++||.||+|+..+.. ...+..
T Consensus 164 ~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~-~~~~-~v~~~~g-~~~a~~vV~A~G~~s~~l~~~~~~------------ 228 (382)
T 1ryi_A 164 YFVCKAYVKAAKMLGAEIFEHTPVLHVERD-GEAL-FIKTPSG-DVWANHVVVASGVWSGMFFKQLGL------------ 228 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCCCEEECS-SSSE-EEEETTE-EEEEEEEEECCGGGTHHHHHHTTC------------
T ss_pred HHHHHHHHHHHHHCCCEEEcCCcEEEEEEE-CCEE-EEEcCCc-eEEcCEEEECCChhHHHHHHhcCC------------
Confidence 357778888888889999999999999985 4446 5887666 8999999999987532 111111
Q ss_pred ccCCccEEEEEEEeccccccccCceeeccCcccchhcccccccccccCCCCcEEEEEecCCCCCCCCChHHHHHHHHHHH
Q 018523 174 KLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKEL 253 (354)
Q Consensus 174 ~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~g~~~l~~~~~~~~~~~~~~~ee~~~~~~~~l 253 (354)
.++..+.-...+.++.+.. .....++.+ ...++ | .+.+..+++.... ...+....+++..+.+++.+
T Consensus 229 ~~~~~~~~g~~~~~~~~~~-~~~~~~~~~--~~~~~-------p--~~~g~~~vG~~~~-~~~~~~~~~~~~~~~l~~~~ 295 (382)
T 1ryi_A 229 NNAFLPVKGECLSVWNDDI-PLTKTLYHD--HCYIV-------P--RKSGRLVVGATMK-PGDWSETPDLGGLESVMKKA 295 (382)
T ss_dssp CCCCEEEEEEEEEEECCSS-CCCSEEEET--TEEEE-------E--CTTSEEEEECCCE-ETCCCCSCCHHHHHHHHHHH
T ss_pred CCceeccceEEEEECCCCC-CccceEEcC--CEEEE-------E--cCCCeEEEeeccc-ccCCCCCCCHHHHHHHHHHH
Confidence 0111122122223332211 011122211 00010 1 0122222222211 11233334566778899999
Q ss_pred HHhCCCCccccccccceeEEEEEEeCCCccccCCCCCCCCCCC-CCC-CCceEEeeccccCCCCCchhHHHHHHHHHHHH
Q 018523 254 AKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQ-RSP-VEGFYLAGDYTKQKYLASMEGAVLSGKLCAQA 331 (354)
Q Consensus 254 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~-~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~ 331 (354)
.+++|.+.. ..+...+ . +.+..+++. .|.. ..| .+|+|+++.+.+ .++.-|..+|+.+|+.
T Consensus 296 ~~~~p~l~~-----~~~~~~w-~----g~~~~t~d~---~p~ig~~~~~~~l~~~~G~~g----~G~~~a~~~g~~la~~ 358 (382)
T 1ryi_A 296 KTMLPAIQN-----MKVDRFW-A----GLRPGTKDG---KPYIGRHPEDSRILFAAGHFR----NGILLAPATGALISDL 358 (382)
T ss_dssp HHHCGGGGG-----SEEEEEE-E----EEEEECSSS---CCEEEEETTEEEEEEEECCSS----CTTTTHHHHHHHHHHH
T ss_pred HHhCCCcCC-----CceeeEE-E----EecccCCCC---CcEeccCCCcCCEEEEEcCCc----chHHHhHHHHHHHHHH
Confidence 999997642 1222211 1 111223332 1211 112 468999876543 3688888999999999
Q ss_pred HHHHhh
Q 018523 332 IVQDYV 337 (354)
Q Consensus 332 il~~~~ 337 (354)
|.....
T Consensus 359 i~~~~~ 364 (382)
T 1ryi_A 359 IMNKEV 364 (382)
T ss_dssp HTTCCC
T ss_pred HhCCCC
Confidence 976543
No 42
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=97.64 E-value=0.005 Score=52.47 Aligned_cols=88 Identities=19% Similarity=0.202 Sum_probs=57.4
Q ss_pred CCChHHHHHHHHHHHHHhCCCCccccccccceeEEEEEEeCCCccccCCCCCCCCCCCCCCCCceEEeeccccCCCCCch
Q 018523 239 SCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASM 318 (354)
Q Consensus 239 ~~~~ee~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~L~~aG~~~~~~~~~~~ 318 (354)
.....+..+.....+....+... ..+......+|.++.+..... .+...+..+|||+|||++.+ +++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~w~~a~~~~~~~----~~~~~~~~~~v~l~GDa~~g---~gv 309 (336)
T 3kkj_A 243 DASREQVIEHLHGAFAELIDCTM------PAPVFSLAHRWLYARPAGAHE----WGALSDADLGIYVCGDWCLS---GRV 309 (336)
T ss_dssp TSCHHHHHHHHHHHHHTTCSSCC------CCCSEEEEEEEEEEEESSCCC----CSSEEETTTTEEECCGGGTT---SSH
T ss_pred cccchhhhhhhhhhhhhhccCCc------CcchheeccceeecccccccC----ccceeeCCCCEEEEecccCC---cCH
Confidence 34555666666667776664432 134445566676543322111 11223445799999999875 589
Q ss_pred hHHHHHHHHHHHHHHHHhhhH
Q 018523 319 EGAVLSGKLCAQAIVQDYVLL 339 (354)
Q Consensus 319 ~gAi~sG~~aa~~il~~~~~~ 339 (354)
++|+.||+.||+.|++.|.++
T Consensus 310 ~~A~~sG~~aA~~I~~~L~~e 330 (336)
T 3kkj_A 310 EGAWLSGQEAARRLLEHLQLE 330 (336)
T ss_dssp HHHHHHHHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999999998765
No 43
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.48 E-value=0.011 Score=58.34 Aligned_cols=57 Identities=18% Similarity=0.169 Sum_probs=47.9
Q ss_pred ccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhh
Q 018523 96 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 154 (354)
Q Consensus 96 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 154 (354)
..+...|.+.+++.|++|+++++|++|..++++ + +|++.+|++++||+||+|+....
T Consensus 417 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~-v-~V~t~~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 417 AELTRNVLELAQQQGLQIYYQYQLQNFSRKDDC-W-LLNFAGDQQATHSVVVLANGHQI 473 (676)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEETTE-E-EEEETTSCEEEESEEEECCGGGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCe-E-EEEECCCCEEECCEEEECCCcch
Confidence 467788888888899999999999999986444 5 58888888899999999998763
No 44
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=97.44 E-value=0.0041 Score=58.25 Aligned_cols=62 Identities=21% Similarity=0.165 Sum_probs=46.8
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEc---CCe--EEEcCEEEEccChhh-HhhhC
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NGN--VIDGDAYVFATPVDI-LKLQL 159 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~---~g~--~~~ad~VI~a~p~~~-l~~ll 159 (354)
.+.+.|.+.+++.|++|+++++|++|..+ ++.+++|++. +|+ +++||.||.|..... +++.+
T Consensus 101 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~vr~~l 168 (453)
T 3atr_A 101 LYNQRVLKEAQDRGVEIWDLTTAMKPIFE-DGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRSFRSKL 168 (453)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEE-TTEEEEEEEEETTTTEEEEEECSEEEECCGGGCTTGGGS
T ss_pred HHHHHHHHHHHHcCCEEEeCcEEEEEEEE-CCEEEEEEEEEcCCCceEEEEcCEEEECcCCchhhHHhc
Confidence 46677777777789999999999999985 4556556664 675 789999999887744 34444
No 45
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=97.37 E-value=0.0022 Score=59.93 Aligned_cols=57 Identities=21% Similarity=0.244 Sum_probs=46.6
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEec--------------CCCCEEEEEEcCCeEE--EcCEEEEccChhh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELN--------------DDGTVKNFLLTNGNVI--DGDAYVFATPVDI 154 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~--------------~~g~v~~V~~~~g~~~--~ad~VI~a~p~~~ 154 (354)
.+...|.+.+++.|++|+.+++|++|..+ +++++.+|.+.+| ++ +||.||+|+..+.
T Consensus 182 ~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s 254 (448)
T 3axb_A 182 KVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWS 254 (448)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCH
Confidence 67788888888899999999999999872 2444656888777 68 9999999998764
No 46
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.36 E-value=0.011 Score=58.36 Aligned_cols=56 Identities=13% Similarity=0.122 Sum_probs=46.8
Q ss_pred ccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCe-EEEcCEEEEccChh
Q 018523 96 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN-VIDGDAYVFATPVD 153 (354)
Q Consensus 96 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~-~~~ad~VI~a~p~~ 153 (354)
..+...|.+.+++.|++|+++++|++|..++++ + +|++.+|+ +++||+||+|+..+
T Consensus 412 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~-v-~V~t~~G~~~i~Ad~VVlAtG~~ 468 (689)
T 3pvc_A 412 SDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQ-W-QLTFGQSQAAKHHATVILATGHR 468 (689)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEECSSS-E-EEEEC-CCCCEEESEEEECCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCe-E-EEEeCCCcEEEECCEEEECCCcc
Confidence 467788888888899999999999999986444 5 58887887 89999999999886
No 47
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=97.33 E-value=0.0081 Score=54.67 Aligned_cols=56 Identities=20% Similarity=0.243 Sum_probs=45.3
Q ss_pred ccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhh
Q 018523 96 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 154 (354)
Q Consensus 96 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 154 (354)
..+...|.+.+++.|++|+++++|++|+.++++ + .|++.+| +++||.||+|+..+.
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~-~-~v~~~~g-~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 150 ENCIRAYRELAEARGAKVLTHTRVEDFDISPDS-V-KIETANG-SYTADKLIVSMGAWN 205 (389)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECSSC-E-EEEETTE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCe-E-EEEeCCC-EEEeCEEEEecCccH
Confidence 367788888888899999999999999985444 5 4777555 799999999998754
No 48
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=97.29 E-value=0.012 Score=53.67 Aligned_cols=57 Identities=11% Similarity=0.094 Sum_probs=45.0
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEc---CCeEEEcCEEEEccChhh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NGNVIDGDAYVFATPVDI 154 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~---~g~~~~ad~VI~a~p~~~ 154 (354)
.+...|.+.+++.|++|+.+++|++|..+ ++.+++|++. ++.+++||.||.|.....
T Consensus 103 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKE-NGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEE-TTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEEe-CCEEEEEEEEECCeEEEEEcCEEEECCCcch
Confidence 46677777777889999999999999985 5556557763 456899999999887643
No 49
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=97.17 E-value=0.043 Score=50.06 Aligned_cols=54 Identities=17% Similarity=0.171 Sum_probs=43.5
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 153 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 153 (354)
.+...|.+.+++.|++|+++++|++|+.+++ .+ .|++.+| +++||.||+|+..+
T Consensus 154 ~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~-~v-~v~t~~g-~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 154 GTLAALFTLAQAAGATLRAGETVTELVPDAD-GV-SVTTDRG-TYRAGKVVLACGPY 207 (397)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEETT-EE-EEEESSC-EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEcCC-eE-EEEECCC-EEEcCEEEEcCCcC
Confidence 5677888888888999999999999998544 35 3776555 79999999998775
No 50
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.16 E-value=0.018 Score=55.66 Aligned_cols=58 Identities=24% Similarity=0.298 Sum_probs=46.9
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEc------CC---------eEEEcCEEEEccChhh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT------NG---------NVIDGDAYVFATPVDI 154 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~------~g---------~~~~ad~VI~a~p~~~ 154 (354)
.|.+.|.+.+++.|++|+++++|++|..+++++|++|.+. +| .+++||.||.|.....
T Consensus 145 ~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S 217 (584)
T 2gmh_A 145 HLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHG 217 (584)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTC
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCc
Confidence 4667788888888999999999999998666777678775 33 5799999999887743
No 51
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=96.87 E-value=0.065 Score=50.70 Aligned_cols=61 Identities=11% Similarity=-0.007 Sum_probs=47.0
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCe---EEEcCEEEEccChhh-HhhhC
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN---VIDGDAYVFATPVDI-LKLQL 159 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~---~~~ad~VI~a~p~~~-l~~ll 159 (354)
.+.+.|.+.+++.|++|+++++|++|+.++++ |+ |++.++. +++||.||.|-.... +++.+
T Consensus 108 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~-v~-v~~~~~~g~~~~~a~~vVgADG~~S~VR~~l 172 (499)
T 2qa2_A 108 TTESVLEEWALGRGAELLRGHTVRALTDEGDH-VV-VEVEGPDGPRSLTTRYVVGCDGGRSTVRKAA 172 (499)
T ss_dssp HHHHHHHHHHHHTTCEEEESCEEEEEEECSSC-EE-EEEECSSCEEEEEEEEEEECCCTTCHHHHHT
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCE-EE-EEEEcCCCcEEEEeCEEEEccCcccHHHHHc
Confidence 56677777778889999999999999986554 63 7776664 789999999877643 44554
No 52
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=96.82 E-value=0.034 Score=50.36 Aligned_cols=57 Identities=12% Similarity=0.140 Sum_probs=41.3
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEc-CC--eEEEcCEEEEccChhh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT-NG--NVIDGDAYVFATPVDI 154 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~-~g--~~~~ad~VI~a~p~~~ 154 (354)
.+-..|.+..++.|++++++++|+.+..+ ++++.+|... +| .+++||.||-|-....
T Consensus 103 ~~~~~L~~~a~~~G~~~~~~~~v~~~~~~-~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S 162 (397)
T 3oz2_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKE-NGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEE-TTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhcCcEEeeeeeeeeeeec-cceeeeeeecccccceEEEEeEEEeCCcccc
Confidence 34556667777889999999999999885 5556545432 34 3688999999877643
No 53
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=96.75 E-value=0.057 Score=51.56 Aligned_cols=63 Identities=19% Similarity=0.267 Sum_probs=47.6
Q ss_pred ccchHHHHHHHHHcCCEEEecceeeEEEecCCC---CEEEEEEcCC---eEEEcCEEEEccChh-hHhhhC
Q 018523 96 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDG---TVKNFLLTNG---NVIDGDAYVFATPVD-ILKLQL 159 (354)
Q Consensus 96 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g---~v~~V~~~~g---~~~~ad~VI~a~p~~-~l~~ll 159 (354)
..|...|.+.+++.|++|+++++|++|+.++++ .| .|++.++ .+++||.||.|.... .+++.+
T Consensus 120 ~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v-~v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~l 189 (535)
T 3ihg_A 120 DKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGV-TARLAGPDGEYDLRAGYLVGADGNRSLVRESL 189 (535)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEE-EEEEEETTEEEEEEEEEEEECCCTTCHHHHHT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccE-EEEEEcCCCeEEEEeCEEEECCCCcchHHHHc
Confidence 356777888888889999999999999986552 35 3666665 678999999987774 444544
No 54
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=96.69 E-value=0.077 Score=50.22 Aligned_cols=61 Identities=11% Similarity=0.096 Sum_probs=46.4
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCe---EEEcCEEEEccChh-hHhhhC
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN---VIDGDAYVFATPVD-ILKLQL 159 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~---~~~ad~VI~a~p~~-~l~~ll 159 (354)
.+.+.|.+.+++.|++|+++++|++|+.++++ |+ |++.++. ++++|.||.|-... ..++.+
T Consensus 107 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~-v~-v~~~~~~g~~~~~a~~vVgADG~~S~VR~~l 171 (500)
T 2qa1_A 107 VTETHLEQWATGLGADIRRGHEVLSLTDDGAG-VT-VEVRGPEGKHTLRAAYLVGCDGGRSSVRKAA 171 (500)
T ss_dssp HHHHHHHHHHHHTTCEEEETCEEEEEEEETTE-EE-EEEEETTEEEEEEESEEEECCCTTCHHHHHT
T ss_pred HHHHHHHHHHHHCCCEEECCcEEEEEEEcCCe-EE-EEEEcCCCCEEEEeCEEEECCCcchHHHHHc
Confidence 56677777777889999999999999986554 63 7776653 78999999987764 344544
No 55
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=96.57 E-value=0.0058 Score=56.44 Aligned_cols=56 Identities=20% Similarity=0.254 Sum_probs=47.6
Q ss_pred ccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccCh
Q 018523 96 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 152 (354)
Q Consensus 96 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 152 (354)
..+.+.+.+.+++.|++|+++++|++|..+ ++++.+|++.+|+++.+|.||+++..
T Consensus 194 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v~~v~l~dG~~i~aD~Vv~a~G~ 249 (415)
T 3lxd_A 194 EALSEFYQAEHRAHGVDLRTGAAMDCIEGD-GTKVTGVRMQDGSVIPADIVIVGIGI 249 (415)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEES-SSBEEEEEESSSCEEECSEEEECSCC
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEec-CCcEEEEEeCCCCEEEcCEEEECCCC
Confidence 455667777788899999999999999984 56677799999999999999999875
No 56
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=96.57 E-value=0.0027 Score=57.67 Aligned_cols=56 Identities=18% Similarity=0.090 Sum_probs=46.6
Q ss_pred ccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhh
Q 018523 96 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 154 (354)
Q Consensus 96 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 154 (354)
..+...|.+.+++.|++|+++++|++|..++++ + +|++.+| +++||+||+|+..+.
T Consensus 154 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~-~-~V~t~~g-~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 154 DALHQGYLRGIRRNQGQVLCNHEALEIRRVDGA-W-EVRCDAG-SYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCCCEEEEETTE-E-EEECSSE-EEEESEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCe-E-EEEeCCC-EEEcCEEEECCChhH
Confidence 467788888888899999999999999986443 4 5888766 899999999988754
No 57
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=96.56 E-value=0.013 Score=53.80 Aligned_cols=53 Identities=25% Similarity=0.377 Sum_probs=41.9
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 153 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 153 (354)
.|.+.|.+.+++ ++|+++++|++|+.++++ + .|++.+|+++++|.||.|....
T Consensus 128 ~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~-v-~v~~~~g~~~~a~~vV~AdG~~ 180 (407)
T 3rp8_A 128 ELQREMLDYWGR--DSVQFGKRVTRCEEDADG-V-TVWFTDGSSASGDLLIAADGSH 180 (407)
T ss_dssp HHHHHHHHHHCG--GGEEESCCEEEEEEETTE-E-EEEETTSCEEEESEEEECCCTT
T ss_pred HHHHHHHHhCCc--CEEEECCEEEEEEecCCc-E-EEEEcCCCEEeeCEEEECCCcC
Confidence 455666666544 899999999999986444 6 4888899999999999987764
No 58
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=96.50 E-value=0.0053 Score=58.84 Aligned_cols=58 Identities=28% Similarity=0.480 Sum_probs=49.2
Q ss_pred ccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhh
Q 018523 96 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 154 (354)
Q Consensus 96 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 154 (354)
..+.+.|.+.+++.|++|+++++|++|..+ ++.+.+|++.+|++++||.||+|+....
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~-~~~v~gV~l~~G~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHME-DGQITGVTLSNGEEIKSRHVVLAVGHSA 277 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEES-SSBEEEEEETTSCEEECSCEEECCCTTC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEe-CCEEEEEEECCCCEEECCEEEECCCCCh
Confidence 357778888888899999999999999985 5557679998898999999999987754
No 59
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=96.43 E-value=0.0061 Score=56.08 Aligned_cols=56 Identities=18% Similarity=0.258 Sum_probs=47.7
Q ss_pred ccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccCh
Q 018523 96 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 152 (354)
Q Consensus 96 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 152 (354)
..+.+.+.+.+++.|++++++++|++|..+ ++++.+|++.+|+++.+|.||+++..
T Consensus 184 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v~~V~~~dG~~i~aD~Vv~a~G~ 239 (404)
T 3fg2_P 184 PEISSYFHDRHSGAGIRMHYGVRATEIAAE-GDRVTGVVLSDGNTLPCDLVVVGVGV 239 (404)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTSCEEECSEEEECCCE
T ss_pred HHHHHHHHHHHHhCCcEEEECCEEEEEEec-CCcEEEEEeCCCCEEEcCEEEECcCC
Confidence 456677777888899999999999999974 45676799999999999999999876
No 60
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=96.42 E-value=0.0065 Score=56.77 Aligned_cols=58 Identities=24% Similarity=0.449 Sum_probs=49.1
Q ss_pred ccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhh
Q 018523 96 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 154 (354)
Q Consensus 96 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 154 (354)
..+.+.|.+.+++.|++|+++++|++|..+ ++.+.+|++.+|++++||.||+|+....
T Consensus 134 ~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~-~~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 134 QSVVDALLTRLKDLGVKIRTNTPVETIEYE-NGQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred HHHHHHHHHHHHHCCCEEEeCcEEEEEEec-CCcEEEEEECCCCEEECCEEEECCCCCc
Confidence 578889999888899999999999999974 5555578888887799999999887644
No 61
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=96.32 E-value=0.0071 Score=57.53 Aligned_cols=57 Identities=28% Similarity=0.398 Sum_probs=46.9
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcC-Ce--EEEcC-EEEEccChh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN-GN--VIDGD-AYVFATPVD 153 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~-g~--~~~ad-~VI~a~p~~ 153 (354)
.+.+.|.+.+++.|++|+++++|++|..+++|+|++|.+.+ |+ ++.|| .||+|+...
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~ 263 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSF 263 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCCh
Confidence 68899999888999999999999999986567888887754 33 58996 999977653
No 62
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=96.22 E-value=0.011 Score=56.98 Aligned_cols=57 Identities=23% Similarity=0.313 Sum_probs=47.0
Q ss_pred ccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEc--CCe--EEEcCEEEEccCh
Q 018523 96 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NGN--VIDGDAYVFATPV 152 (354)
Q Consensus 96 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~--~g~--~~~ad~VI~a~p~ 152 (354)
..+.+.|.+.+++.|++|+++++|++|..+++++|++|++. +|+ ++.||.||+|+..
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg 315 (571)
T 1y0p_A 255 AHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGG 315 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCC
Confidence 46788888888889999999999999998544778777765 575 6899999998866
No 63
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=96.16 E-value=0.038 Score=53.24 Aligned_cols=61 Identities=15% Similarity=0.177 Sum_probs=46.6
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEE--cCC-eEEEcCEEEEccChh-hHhhhC
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL--TNG-NVIDGDAYVFATPVD-ILKLQL 159 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~--~~g-~~~~ad~VI~a~p~~-~l~~ll 159 (354)
.|.+.|.+.+++.|++|+.+++|++|+.++++ ++ |++ .+| ++++||.||.|.... .+++.+
T Consensus 149 ~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~-v~-v~~~~~~G~~~~~a~~vV~ADG~~S~vR~~l 213 (570)
T 3fmw_A 149 RTEALLAEHAREAGAEIPRGHEVTRLRQDAEA-VE-VTVAGPSGPYPVRARYGVGCDGGRSTVRRLA 213 (570)
T ss_dssp HHHHHHHHHHHHHTEECCBSCEEEECCBCSSC-EE-EEEEETTEEEEEEESEEEECSCSSCHHHHHT
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCe-EE-EEEEeCCCcEEEEeCEEEEcCCCCchHHHHc
Confidence 46677777777789999999999999986555 53 666 677 689999999987764 444544
No 64
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=95.98 E-value=0.017 Score=55.85 Aligned_cols=57 Identities=30% Similarity=0.391 Sum_probs=45.9
Q ss_pred ccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEc--CCe--EEEcCEEEEccCh
Q 018523 96 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NGN--VIDGDAYVFATPV 152 (354)
Q Consensus 96 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~--~g~--~~~ad~VI~a~p~ 152 (354)
..+.+.|.+.+++.|++|+++++|++|..+++++|++|++. +|+ ++.||.||+|+..
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg 315 (572)
T 1d4d_A 255 AHVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGG 315 (572)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCC
Confidence 36788888888889999999999999987532678778775 564 6899999998864
No 65
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=95.98 E-value=0.014 Score=56.36 Aligned_cols=58 Identities=28% Similarity=0.326 Sum_probs=47.1
Q ss_pred ccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEc--CCe--EEEcCEEEEccChh
Q 018523 96 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NGN--VIDGDAYVFATPVD 153 (354)
Q Consensus 96 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~--~g~--~~~ad~VI~a~p~~ 153 (354)
..+.+.|.+.+++.|++|+++++|++|..+++++|++|++. +|+ ++.||.||+|+...
T Consensus 250 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~ 311 (566)
T 1qo8_A 250 PEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGY 311 (566)
T ss_dssp HHHHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCc
Confidence 45788888888889999999999999998542778777765 675 68999999987653
No 66
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=95.89 E-value=0.45 Score=46.44 Aligned_cols=63 Identities=14% Similarity=0.198 Sum_probs=45.8
Q ss_pred cchHHHHHHHHHcCC--EEEecceeeEEEecCC--C-CEEEEEEc------CC--eEEEcCEEEEccChh-hHhhhCC
Q 018523 97 RLCLPIVEHIQSLGG--EVRLNSRVQKIELNDD--G-TVKNFLLT------NG--NVIDGDAYVFATPVD-ILKLQLP 160 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~--~i~~~~~V~~I~~~~~--g-~v~~V~~~------~g--~~~~ad~VI~a~p~~-~l~~ll~ 160 (354)
.+.+.|.+.+++.|+ +|+++++|++|+.+++ + .| .|++. +| ++++||.||.|.... .+++.+.
T Consensus 142 ~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v-~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg 218 (639)
T 2dkh_A 142 RVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPV-TVTLERCDAAHAGQIETVQARYVVGCDGARSNVRRAIG 218 (639)
T ss_dssp HHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCE-EEEEEECSGGGTTCEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCE-EEEEEeccccCCCCeEEEEeCEEEECCCcchHHHHHhC
Confidence 566777788888887 9999999999998643 1 35 36554 46 578999999987774 4455553
No 67
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=95.86 E-value=0.018 Score=52.04 Aligned_cols=55 Identities=16% Similarity=0.192 Sum_probs=45.5
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 154 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 154 (354)
.+.+.|.+.+++.|++|+.+++|++|+.++++ + .|++.+| +++||.||+|+..+.
T Consensus 150 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~-~-~v~~~~g-~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 150 LAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDG-V-TIETADG-EYQAKKAIVCAGTWV 204 (372)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECSSS-E-EEEESSC-EEEEEEEEECCGGGG
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCE-E-EEEECCC-eEEcCEEEEcCCccH
Confidence 67788888888899999999999999985444 5 4777777 589999999998764
No 68
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=95.74 E-value=0.014 Score=56.28 Aligned_cols=58 Identities=19% Similarity=0.196 Sum_probs=47.3
Q ss_pred ccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcC---C--eEEEcCEEEEccChhh
Q 018523 96 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN---G--NVIDGDAYVFATPVDI 154 (354)
Q Consensus 96 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~---g--~~~~ad~VI~a~p~~~ 154 (354)
..+...+++.+++.|++|+++++|++|..+ ++++.+|++.+ | .+++||.||.|+.++.
T Consensus 170 ~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~-~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 170 ARLTLEIMKEAVARGAVALNYMKVESFIYD-QGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEc-CCeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 467888888888899999999999999985 55566787754 3 4689999999988764
No 69
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=95.69 E-value=0.015 Score=53.76 Aligned_cols=56 Identities=16% Similarity=0.326 Sum_probs=47.2
Q ss_pred ccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhh
Q 018523 96 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 154 (354)
Q Consensus 96 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 154 (354)
..+.+.|.+.+++.|++|+++++|++|..++++ + .|++.+| +++||.||+|+....
T Consensus 132 ~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~-~-~V~~~~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 132 KDIIRMLMAEMKEAGVQLRLETSIGEVERTASG-F-RVTTSAG-TVDAASLVVASGGKS 187 (417)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEEETTE-E-EEEETTE-EEEESEEEECCCCSS
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCE-E-EEEECCc-EEEeeEEEECCCCcc
Confidence 578889999888899999999999999985443 5 4888777 899999999987754
No 70
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=95.67 E-value=0.028 Score=52.14 Aligned_cols=56 Identities=16% Similarity=0.227 Sum_probs=45.6
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEec-CCCCEEEEEEcCCeEEEcCEEEEccCh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELN-DDGTVKNFLLTNGNVIDGDAYVFATPV 152 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~-~~g~v~~V~~~~g~~~~ad~VI~a~p~ 152 (354)
.+.+.+.+.+++.|++++++++|++|..+ +++++.+|++.+|+++.+|.||++++.
T Consensus 192 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~ 248 (431)
T 1q1r_A 192 PVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGL 248 (431)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCE
T ss_pred HHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCC
Confidence 45566677788899999999999999862 245566688888989999999999876
No 71
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=95.61 E-value=0.024 Score=54.02 Aligned_cols=56 Identities=21% Similarity=0.274 Sum_probs=45.2
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCE--EEEEEcCCe-EEEcCEEEEccCh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTV--KNFLLTNGN-VIDGDAYVFATPV 152 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v--~~V~~~~g~-~~~ad~VI~a~p~ 152 (354)
.+.+.+.+.+++.|++|+++++|++|..++++++ ..|++.+|+ ++.+|.||+++..
T Consensus 256 ~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~ 314 (523)
T 1mo9_A 256 ETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGE 314 (523)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCC
T ss_pred HHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCC
Confidence 4566777888889999999999999997545543 247777887 8999999999865
No 72
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=95.60 E-value=0.029 Score=53.87 Aligned_cols=58 Identities=17% Similarity=0.235 Sum_probs=48.2
Q ss_pred cchHHHHHHHHHc-CCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhhH
Q 018523 97 RLCLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDIL 155 (354)
Q Consensus 97 ~l~~~l~~~l~~~-g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~l 155 (354)
.+.+.|.+.+++. |++|+++ +|++|..++++++.+|++.+|++++||.||.|......
T Consensus 195 ~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~ 253 (550)
T 2e4g_A 195 LVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGL 253 (550)
T ss_dssp HHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCC
T ss_pred HHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchh
Confidence 5777788888888 9999999 99999986566666788888888999999999887543
No 73
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=95.60 E-value=0.018 Score=58.28 Aligned_cols=56 Identities=25% Similarity=0.244 Sum_probs=47.3
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 154 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 154 (354)
.+...|.+.+++.|++|+++++|++|..+ ++.+.+|.+.+| +++||+||+|+..+.
T Consensus 152 ~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~-~~~v~~V~t~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 152 RAVQLLIKRTESAGVTYRGSTTVTGIEQS-GGRVTGVQTADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHcCCEEECCceEEEEEEe-CCEEEEEEECCc-EEECCEEEECCccch
Confidence 67888888888899999999999999985 455656888666 799999999998865
No 74
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=95.60 E-value=0.027 Score=53.23 Aligned_cols=55 Identities=25% Similarity=0.332 Sum_probs=45.2
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccCh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 152 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 152 (354)
.+.+.+.+.+++.|++|+++++|++|..++++.+ .|++.+|+++.+|.||+++..
T Consensus 232 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~-~v~~~~G~~i~~D~vv~a~G~ 286 (490)
T 1fec_A 232 ELRKQLTEQLRANGINVRTHENPAKVTKNADGTR-HVVFESGAEADYDVVMLAIGR 286 (490)
T ss_dssp HHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCE-EEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEE-EEEECCCcEEEcCEEEEccCC
Confidence 4566677788889999999999999997544444 588888888999999999876
No 75
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=95.57 E-value=0.02 Score=52.74 Aligned_cols=55 Identities=15% Similarity=0.235 Sum_probs=44.7
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 153 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 153 (354)
.+.+.+.+.+++.|++++++++|++|..+ + ++.+|++.+|+++.+|.||++++..
T Consensus 186 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~-~~~~v~~~dg~~i~aD~Vv~a~G~~ 240 (410)
T 3ef6_A 186 RIGAWLRGLLTELGVQVELGTGVVGFSGE-G-QLEQVMASDGRSFVADSALICVGAE 240 (410)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEEECS-S-SCCEEEETTSCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEecc-C-cEEEEEECCCCEEEcCEEEEeeCCe
Confidence 34556667778889999999999999873 3 4546899899999999999998763
No 76
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=95.57 E-value=0.031 Score=52.91 Aligned_cols=55 Identities=22% Similarity=0.344 Sum_probs=45.1
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccCh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 152 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 152 (354)
.+.+.+.+.+++.|++|+++++|++|..++++.+ .|++.+|+++.+|.||+++..
T Consensus 236 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~-~v~~~~G~~i~~D~vv~a~G~ 290 (495)
T 2wpf_A 236 TIREEVTKQLTANGIEIMTNENPAKVSLNTDGSK-HVTFESGKTLDVDVVMMAIGR 290 (495)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCE-EEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceE-EEEECCCcEEEcCEEEECCCC
Confidence 4466777788889999999999999997544434 588888888999999999875
No 77
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=95.56 E-value=0.026 Score=53.15 Aligned_cols=56 Identities=18% Similarity=0.200 Sum_probs=44.6
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCC-eEEEcCEEEEccCh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG-NVIDGDAYVFATPV 152 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g-~~~~ad~VI~a~p~ 152 (354)
.+.+.+.+.+++.|++++++++|++|..++++++..|++.+| +++.+|.||+++..
T Consensus 227 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~ 283 (479)
T 2hqm_A 227 CIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGR 283 (479)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCC
Confidence 455667777888999999999999999754453335888888 78999999999875
No 78
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=95.51 E-value=0.034 Score=52.70 Aligned_cols=58 Identities=19% Similarity=0.192 Sum_probs=47.7
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhhH
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDIL 155 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~l 155 (354)
.+...|.+.+++.|++++.+ +|++|..++++.+.+|++.+|++++||.||.|......
T Consensus 174 ~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 174 EVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGL 231 (511)
T ss_dssp HHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchH
Confidence 56677777777889999999 99999986566666788888888999999999887543
No 79
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=95.50 E-value=0.032 Score=52.40 Aligned_cols=55 Identities=20% Similarity=0.306 Sum_probs=46.0
Q ss_pred ccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccCh
Q 018523 96 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 152 (354)
Q Consensus 96 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 152 (354)
..+.+.+.+.+++.|++|+++++|++|..+ ++.++ |++.+|+++.+|.||+++..
T Consensus 202 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v~-v~~~~g~~i~aD~Vv~a~G~ 256 (472)
T 3iwa_A 202 KSLSQMLRHDLEKNDVVVHTGEKVVRLEGE-NGKVA-RVITDKRTLDADLVILAAGV 256 (472)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEE-EEEESSCEEECSEEEECSCE
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEcc-CCeEE-EEEeCCCEEEcCEEEECCCC
Confidence 455677778888899999999999999973 55564 78888889999999999876
No 80
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=95.37 E-value=0.032 Score=44.72 Aligned_cols=54 Identities=22% Similarity=0.252 Sum_probs=43.6
Q ss_pred ccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChh
Q 018523 96 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 153 (354)
Q Consensus 96 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 153 (354)
..+.+.+.+.+++.|++++++ +|++|..++++ + .|++.+| ++++|.||.|+...
T Consensus 56 ~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~-~-~v~~~~g-~i~ad~vI~A~G~~ 109 (180)
T 2ywl_A 56 EELLRRLEAHARRYGAEVRPG-VVKGVRDMGGV-F-EVETEEG-VEKAERLLLCTHKD 109 (180)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CCCEEEECSSS-E-EEECSSC-EEEEEEEEECCTTC
T ss_pred HHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCCE-E-EEEECCC-EEEECEEEECCCCC
Confidence 356777778888899999999 99999985444 4 4788778 89999999998763
No 81
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=95.36 E-value=0.035 Score=51.76 Aligned_cols=55 Identities=20% Similarity=0.309 Sum_probs=45.0
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccCh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 152 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 152 (354)
.+.+.+.+.+++.|++++++++|++|..++++.+ .|++.+|+++.+|.||+++..
T Consensus 209 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~g~~i~~D~vv~a~G~ 263 (450)
T 1ges_A 209 MISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSL-TLELEDGRSETVDCLIWAIGR 263 (450)
T ss_dssp HHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCE-EEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEE-EEEECCCcEEEcCEEEECCCC
Confidence 4566777788889999999999999997544434 588888888999999999865
No 82
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=95.32 E-value=0.028 Score=51.68 Aligned_cols=63 Identities=16% Similarity=0.195 Sum_probs=47.7
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCe--EEEcCEEEEccChh-hHhhhC
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN--VIDGDAYVFATPVD-ILKLQL 159 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~--~~~ad~VI~a~p~~-~l~~ll 159 (354)
.+...|.+.+++.|++|+.+++|++|+.++++.+..|.+.+|+ +++||.||.|.... .+++++
T Consensus 107 ~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s~l~~~~ 172 (421)
T 3nix_A 107 NFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGRVIPRMF 172 (421)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGCHHHHHT
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCchhhHHhc
Confidence 5667777777778999999999999998655543456667786 68999999988764 334444
No 83
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=95.29 E-value=0.03 Score=47.11 Aligned_cols=55 Identities=13% Similarity=0.039 Sum_probs=43.8
Q ss_pred cchHHHHHHHHHc-CCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChh
Q 018523 97 RLCLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 153 (354)
Q Consensus 97 ~l~~~l~~~l~~~-g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 153 (354)
.+.+.+.+.+++. |++++ +++|++|..+ ++++.+|.+.+|++++||.||.|+...
T Consensus 69 ~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~-~~~v~~v~~~~g~~i~a~~VV~A~G~~ 124 (232)
T 2cul_A 69 AFHARAKYLLEGLRPLHLF-QATATGLLLE-GNRVVGVRTWEGPPARGEKVVLAVGSF 124 (232)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEE-TTEEEEEEETTSCCEECSEEEECCTTC
T ss_pred HHHHHHHHHHHcCCCcEEE-EeEEEEEEEe-CCEEEEEEECCCCEEECCEEEECCCCC
Confidence 5667777778776 88888 6799999985 455656888888889999999998763
No 84
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=95.24 E-value=0.039 Score=52.02 Aligned_cols=55 Identities=22% Similarity=0.270 Sum_probs=45.8
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 153 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 153 (354)
.+.+.+.+.+++.|++|+++++|++|+.+ ++.+ .|++.+|+++.+|.||++++..
T Consensus 233 ~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~-~~~v-~v~~~~g~~i~aD~Vi~A~G~~ 287 (484)
T 3o0h_A 233 DLRQLLNDAMVAKGISIIYEATVSQVQST-ENCY-NVVLTNGQTICADRVMLATGRV 287 (484)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEC-SSSE-EEEETTSCEEEESEEEECCCEE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEee-CCEE-EEEECCCcEEEcCEEEEeeCCC
Confidence 45677777888899999999999999985 4446 5888889899999999998763
No 85
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=95.23 E-value=0.036 Score=50.44 Aligned_cols=54 Identities=19% Similarity=0.262 Sum_probs=44.6
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccCh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 152 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 152 (354)
.+.+.+.+.+++.|++++++++|++|..+++ .+ .|++.+|+++++|.||+++..
T Consensus 188 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~-~~-~v~~~~g~~i~~d~vv~a~G~ 241 (384)
T 2v3a_A 188 AAAKAVQAGLEGLGVRFHLGPVLASLKKAGE-GL-EAHLSDGEVIPCDLVVSAVGL 241 (384)
T ss_dssp HHHHHHHHHHHTTTCEEEESCCEEEEEEETT-EE-EEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHcCCEEEeCCEEEEEEecCC-EE-EEEECCCCEEECCEEEECcCC
Confidence 4567777888889999999999999997533 34 588888889999999999875
No 86
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=95.22 E-value=0.039 Score=51.69 Aligned_cols=54 Identities=15% Similarity=0.191 Sum_probs=44.9
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEE-EcCCeEEEcCEEEEccCh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFL-LTNGNVIDGDAYVFATPV 152 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~-~~~g~~~~ad~VI~a~p~ 152 (354)
.+.+.+.+.+++.|++|+++++|++|..++++.+ .|+ +.+|+ +.+|.||+++..
T Consensus 212 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~g~-i~aD~Vv~a~G~ 266 (463)
T 4dna_A 212 DMRRGLHAAMEEKGIRILCEDIIQSVSADADGRR-VATTMKHGE-IVADQVMLALGR 266 (463)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCE-EEEESSSCE-EEESEEEECSCE
T ss_pred HHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEE-EEEEcCCCe-EEeCEEEEeeCc
Confidence 4567777888889999999999999998655544 588 88887 999999999876
No 87
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=95.15 E-value=0.048 Score=52.75 Aligned_cols=58 Identities=17% Similarity=0.095 Sum_probs=46.4
Q ss_pred ccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEE---cCCe--EEEcCEEEEccChh
Q 018523 96 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGN--VIDGDAYVFATPVD 153 (354)
Q Consensus 96 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~---~~g~--~~~ad~VI~a~p~~ 153 (354)
..+...|.+.+++.|++|+++++|++|..+++++|.+|.+ .+|+ ++.|+.||+|+...
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~ 205 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGA 205 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCC
Confidence 3577888888888899999999999999853567777775 3564 58899999988763
No 88
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=95.15 E-value=0.045 Score=51.81 Aligned_cols=55 Identities=16% Similarity=0.222 Sum_probs=44.9
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 153 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 153 (354)
.+.+.+.+.+++.|++|+++++|++|..+ ++.+ .|++.+|+++.+|.||+++...
T Consensus 224 ~~~~~l~~~l~~~GV~i~~~~~V~~i~~~-~~~v-~v~~~~g~~i~aD~Vv~a~G~~ 278 (499)
T 1xdi_A 224 DAALVLEESFAERGVRLFKNARAASVTRT-GAGV-LVTMTDGRTVEGSHALMTIGSV 278 (499)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEEC-SSSE-EEEETTSCEEEESEEEECCCEE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEe-CCEE-EEEECCCcEEEcCEEEECCCCC
Confidence 45577778888899999999999999975 3346 4777788889999999998764
No 89
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=95.13 E-value=0.036 Score=53.45 Aligned_cols=57 Identities=7% Similarity=0.043 Sum_probs=45.3
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEc---CCe--EEEcCEEEEccChhh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NGN--VIDGDAYVFATPVDI 154 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~---~g~--~~~ad~VI~a~p~~~ 154 (354)
.+...+++.+++.|++|+++++|++|..+ ++++.+|++. +|+ +++||.||.|+.++.
T Consensus 189 ~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~-~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 189 RLVIDNIKKAAEDGAYLVSKMKAVGFLYE-GDQIVGVKARDLLTDEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEBSCEEECCGGGH
T ss_pred HHHHHHHHHHHHcCCeEEeccEEEEEEEe-CCEEEEEEEEEcCCCCEEEEEcCEEEECCChhH
Confidence 56677777778899999999999999985 4556667753 343 689999999998864
No 90
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=95.03 E-value=0.064 Score=47.11 Aligned_cols=55 Identities=11% Similarity=0.103 Sum_probs=42.1
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcC----C--eEEEcCEEEEccCh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN----G--NVIDGDAYVFATPV 152 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~----g--~~~~ad~VI~a~p~ 152 (354)
.+.+.+.+.+++.|++|+++++|++|..+ ++++.+|++.+ | +++.+|.||++++.
T Consensus 185 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~ 245 (320)
T 1trb_A 185 ILIKRLMDKVENGNIILHTNRTLEEVTGD-QMGVTGVRLRDTQNSDNIESLDVAGLFVAIGH 245 (320)
T ss_dssp HHHHHHHHHHHTSSEEEECSCEEEEEEEC-SSSEEEEEEECCTTCCCCEEEECSEEEECSCE
T ss_pred HHHHHHHHhcccCCeEEEcCceeEEEEcC-CCceEEEEEEeccCCCceEEEEcCEEEEEeCC
Confidence 34556666777789999999999999974 44565677654 4 57899999998765
No 91
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.98 E-value=0.058 Score=51.06 Aligned_cols=55 Identities=11% Similarity=0.134 Sum_probs=44.8
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeE-EEcCEEEEccCh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNV-IDGDAYVFATPV 152 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~-~~ad~VI~a~p~ 152 (354)
.+.+.+.+.+++.|++|+++++|++|..++++.+ .|++.+|++ +.+|.||++++.
T Consensus 218 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~-~v~~~~g~~~~~~D~vi~a~G~ 273 (500)
T 1onf_A 218 SVINVLENDMKKNNINIVTFADVVEIKKVSDKNL-SIHLSDGRIYEHFDHVIYCVGR 273 (500)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCE-EEEETTSCEEEEESEEEECCCB
T ss_pred hhHHHHHHHHHhCCCEEEECCEEEEEEEcCCceE-EEEECCCcEEEECCEEEECCCC
Confidence 4556677788889999999999999997544544 478888877 999999999875
No 92
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=94.89 E-value=0.044 Score=51.09 Aligned_cols=56 Identities=18% Similarity=0.240 Sum_probs=44.3
Q ss_pred ccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChh
Q 018523 96 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 153 (354)
Q Consensus 96 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 153 (354)
..+.+.+.+.+++.|++|+++++|++|..+ ++++..|.+ +|+++.+|.||++++..
T Consensus 191 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~~v~~v~~-~g~~i~~D~vv~a~G~~ 246 (452)
T 2cdu_A 191 KEFTDILAKDYEAHGVNLVLGSKVAAFEEV-DDEIITKTL-DGKEIKSDIAILCIGFR 246 (452)
T ss_dssp HHHHHHHHHHHHHTTCEEEESSCEEEEEEE-TTEEEEEET-TSCEEEESEEEECCCEE
T ss_pred hhHHHHHHHHHHHCCCEEEcCCeeEEEEcC-CCeEEEEEe-CCCEEECCEEEECcCCC
Confidence 345667778888899999999999999863 455644555 77889999999998763
No 93
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=94.88 E-value=0.063 Score=51.28 Aligned_cols=59 Identities=17% Similarity=0.273 Sum_probs=48.0
Q ss_pred ccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhhH
Q 018523 96 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDIL 155 (354)
Q Consensus 96 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~l 155 (354)
..+.+.|.+.+++.|++++.+ +|++|..++++.+.+|++.+|++++||.||.|......
T Consensus 165 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 165 HLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGL 223 (538)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchh
Confidence 356777888888889999999 89999986566655688888888999999999887543
No 94
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=94.78 E-value=0.05 Score=51.42 Aligned_cols=54 Identities=24% Similarity=0.290 Sum_probs=44.3
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccCh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 152 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 152 (354)
.+.+.+.+.+++.|++|+++++|++|..+ ++.+ .|++.+|+++.+|.||++++.
T Consensus 227 ~~~~~~~~~l~~~GV~v~~~~~V~~i~~~-~~~~-~v~l~dG~~i~aD~Vv~a~G~ 280 (493)
T 1m6i_A 227 YLSNWTMEKVRREGVKVMPNAIVQSVGVS-SGKL-LIKLKDGRKVETDHIVAAVGL 280 (493)
T ss_dssp HHHHHHHHHHHTTTCEEECSCCEEEEEEE-TTEE-EEEETTSCEEEESEEEECCCE
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEec-CCeE-EEEECCCCEEECCEEEECCCC
Confidence 35566677788899999999999999874 4445 588888989999999999876
No 95
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=94.77 E-value=0.063 Score=50.03 Aligned_cols=55 Identities=13% Similarity=0.163 Sum_probs=44.4
Q ss_pred ccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChh
Q 018523 96 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 153 (354)
Q Consensus 96 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 153 (354)
..+.+.+.+.+++.|++|+++++|++|... ++.+ .|.+.+| ++.+|.||++++..
T Consensus 189 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v-~v~~~~g-~i~aD~Vv~A~G~~ 243 (452)
T 3oc4_A 189 KEMVAEVQKSLEKQAVIFHFEETVLGIEET-ANGI-VLETSEQ-EISCDSGIFALNLH 243 (452)
T ss_dssp HHHHHHHHHHHHTTTEEEEETCCEEEEEEC-SSCE-EEEESSC-EEEESEEEECSCCB
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEcc-CCeE-EEEECCC-EEEeCEEEECcCCC
Confidence 345667777888899999999999999974 4556 5788666 89999999998763
No 96
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=94.70 E-value=0.049 Score=49.74 Aligned_cols=62 Identities=18% Similarity=0.258 Sum_probs=48.0
Q ss_pred cchHHHHHHHHHc-CCEEEecceeeEEEecCCCCEE-EEEEcCCeEEEcCEEEEccChhh-HhhhC
Q 018523 97 RLCLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVK-NFLLTNGNVIDGDAYVFATPVDI-LKLQL 159 (354)
Q Consensus 97 ~l~~~l~~~l~~~-g~~i~~~~~V~~I~~~~~g~v~-~V~~~~g~~~~ad~VI~a~p~~~-l~~ll 159 (354)
.|.+.|.+.+++. |++|+++++|++|+.++++ ++ .|++.+|+++++|.||.|..... +++.+
T Consensus 108 ~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~-v~g~v~~~~g~~~~ad~vV~AdG~~s~vr~~l 172 (399)
T 2x3n_A 108 SLRRLVLEKIDGEATVEMLFETRIEAVQRDERH-AIDQVRLNDGRVLRPRVVVGADGIASYVRRRL 172 (399)
T ss_dssp HHHHHHHHHHTTCTTEEEECSCCEEEEEECTTS-CEEEEEETTSCEEEEEEEEECCCTTCHHHHHT
T ss_pred HHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCc-eEEEEEECCCCEEECCEEEECCCCChHHHHHh
Confidence 5667777777776 8999999999999986554 52 37888888899999999887743 44544
No 97
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=94.69 E-value=0.06 Score=49.40 Aligned_cols=57 Identities=14% Similarity=0.112 Sum_probs=46.1
Q ss_pred ccchHHHHHHHHHcCCEEEecceeeEEEecC---CCCEEEEEEcCCeEEEcCEEEEccChhh
Q 018523 96 ERLCLPIVEHIQSLGGEVRLNSRVQKIELND---DGTVKNFLLTNGNVIDGDAYVFATPVDI 154 (354)
Q Consensus 96 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~---~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 154 (354)
..+.+.|.+.+++.|++|+++++|++|..++ ++.+ .|++.+| +++||+||+|+....
T Consensus 109 ~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~-~v~~~~g-~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 109 EQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRF-VLQVNST-QWQCKNLIVATGGLS 168 (401)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCE-EEEETTE-EEEESEEEECCCCSS
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeE-EEEECCC-EEECCEEEECCCCcc
Confidence 5788899988888999999999999999741 3335 4777665 799999999886654
No 98
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=94.62 E-value=0.059 Score=50.26 Aligned_cols=55 Identities=16% Similarity=0.208 Sum_probs=44.4
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 153 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 153 (354)
.+.+.+.+.+++.|++|+++++|++|..+++ .+ .|++.+|+++.+|.||+++...
T Consensus 209 ~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~-~v-~v~~~~g~~i~~D~vv~A~G~~ 263 (455)
T 2yqu_A 209 EVSRAAERVFKKQGLTIRTGVRVTAVVPEAK-GA-RVELEGGEVLEADRVLVAVGRR 263 (455)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEEEEETT-EE-EEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHCCCEEEECCEEEEEEEeCC-EE-EEEECCCeEEEcCEEEECcCCC
Confidence 4566777788889999999999999997533 34 4777778889999999998764
No 99
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=94.50 E-value=0.076 Score=50.24 Aligned_cols=57 Identities=21% Similarity=0.182 Sum_probs=45.9
Q ss_pred ccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEc---CCe--EEEcCEEEEccChhh
Q 018523 96 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NGN--VIDGDAYVFATPVDI 154 (354)
Q Consensus 96 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~---~g~--~~~ad~VI~a~p~~~ 154 (354)
..+...+.+.+++.|++|+++++|++|..+ + .+.+|++. +|+ +++||.||.|+.++.
T Consensus 149 ~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~-~-~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 149 ARLVLANAQMVVRKGGEVLTRTRATSARRE-N-GLWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEE-T-TEEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCEEEcCcEEEEEEEe-C-CEEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 357788888888899999999999999985 3 35467773 565 789999999988764
No 100
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=94.48 E-value=0.1 Score=49.60 Aligned_cols=57 Identities=19% Similarity=0.317 Sum_probs=46.0
Q ss_pred cchHHHHHHHHH-cCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhh
Q 018523 97 RLCLPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 154 (354)
Q Consensus 97 ~l~~~l~~~l~~-~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 154 (354)
.+.+.|.+.+++ .|++++.+ +|++|..++++.+.+|++.+|++++||.||.|.....
T Consensus 176 ~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S 233 (526)
T 2pyx_A 176 KFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKS 233 (526)
T ss_dssp HHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGC
T ss_pred HHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcch
Confidence 566777777777 89999999 6999998656665568887877899999999988754
No 101
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=94.20 E-value=0.11 Score=47.22 Aligned_cols=63 Identities=11% Similarity=0.144 Sum_probs=47.2
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEE-cCCe--EEEcCEEEEccChh-hHhhhCC
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL-TNGN--VIDGDAYVFATPVD-ILKLQLP 160 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~-~~g~--~~~ad~VI~a~p~~-~l~~ll~ 160 (354)
.+.+.|.+.+.+.|++|+++++|++|..++++.+ .|++ .+|+ ++++|.||.|.... .+++.+.
T Consensus 104 ~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~-~v~~~~~g~~~~~~a~~vV~AdG~~S~vr~~l~ 170 (394)
T 1k0i_A 104 EVTRDLMEAREACGATTVYQAAEVRLHDLQGERP-YVTFERDGERLRLDCDYIAGCDGFHGISRQSIP 170 (394)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSC-EEEEEETTEEEEEECSEEEECCCTTCSTGGGSC
T ss_pred HHHHHHHHHHHhcCCeEEeceeEEEEEEecCCce-EEEEecCCcEEEEEeCEEEECCCCCcHHHHhcC
Confidence 4667777777778999999999999997533334 4776 6786 78999999988774 4445553
No 102
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=94.17 E-value=0.094 Score=49.07 Aligned_cols=54 Identities=20% Similarity=0.326 Sum_probs=44.2
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCe-EEEcCEEEEccCh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN-VIDGDAYVFATPV 152 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~-~~~ad~VI~a~p~ 152 (354)
.+.+.+.+.+++.|++++++++|++|..++++ + .|++.+|+ ++.+|.||+++..
T Consensus 208 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~-~-~v~~~~G~~~i~~D~vv~a~G~ 262 (463)
T 2r9z_A 208 LLSATLAENMHAQGIETHLEFAVAALERDAQG-T-TLVAQDGTRLEGFDSVIWAVGR 262 (463)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEEEETTE-E-EEEETTCCEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCe-E-EEEEeCCcEEEEcCEEEECCCC
Confidence 45566777788899999999999999975444 4 58888898 8999999999865
No 103
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=93.96 E-value=0.11 Score=48.79 Aligned_cols=55 Identities=15% Similarity=0.088 Sum_probs=43.0
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCe-----EEEcCEEEEccCh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN-----VIDGDAYVFATPV 152 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~-----~~~ad~VI~a~p~ 152 (354)
.+.+.+.+.+++.|++|+++++|++|..++++.+ .|++.+++ ++.+|.||+++..
T Consensus 228 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~~~~D~vi~a~G~ 287 (483)
T 3dgh_A 228 QMAELVAASMEERGIPFLRKTVPLSVEKQDDGKL-LVKYKNVETGEESEDVYDTVLWAIGR 287 (483)
T ss_dssp HHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCE-EEEEEETTTCCEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcE-EEEEecCCCCceeEEEcCEEEECccc
Confidence 4556677778889999999999999998555555 36665543 7899999999876
No 104
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=93.86 E-value=0.14 Score=45.95 Aligned_cols=56 Identities=27% Similarity=0.299 Sum_probs=44.9
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 153 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 153 (354)
.+.+.+.+.+++.|.+++++++|++|..++++.+ .|++.+|+++.+|+||+|+...
T Consensus 75 ~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~-~v~~~~g~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 75 DLVESLWAQAERYNPDVVLNETVTKYTKLDDGTF-ETRTNTGNVYRSRAVLIAAGLG 130 (360)
T ss_dssp HHHHHHHHHHHTTCCEEECSCCEEEEEECTTSCE-EEEETTSCEEEEEEEEECCTTC
T ss_pred HHHHHHHHHHHHhCCEEEcCCEEEEEEECCCceE-EEEECCCcEEEeeEEEEccCCC
Confidence 4566677777778999999999999998644445 4788888889999999998764
No 105
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=93.84 E-value=0.13 Score=45.29 Aligned_cols=53 Identities=8% Similarity=0.025 Sum_probs=40.6
Q ss_pred hHHHHHHHHHc-CCEEEecceeeEEEecCCCCEEEEEEcC-----CeEEEcCEEEEccCh
Q 018523 99 CLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVKNFLLTN-----GNVIDGDAYVFATPV 152 (354)
Q Consensus 99 ~~~l~~~l~~~-g~~i~~~~~V~~I~~~~~g~v~~V~~~~-----g~~~~ad~VI~a~p~ 152 (354)
...+.+.+.+. |++++++++|++|..+ ++.+.+|++.+ ++++.+|.||++++.
T Consensus 211 ~~~~~~~l~~~~gv~i~~~~~v~~i~~~-~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 269 (338)
T 3itj_A 211 STIMQKRAEKNEKIEILYNTVALEAKGD-GKLLNALRIKNTKKNEETDLPVSGLFYAIGH 269 (338)
T ss_dssp CHHHHHHHHHCTTEEEECSEEEEEEEES-SSSEEEEEEEETTTTEEEEEECSEEEECSCE
T ss_pred CHHHHHHHHhcCCeEEeecceeEEEEcc-cCcEEEEEEEECCCCceEEEEeCEEEEEeCC
Confidence 45666667665 9999999999999985 44465677765 357899999998765
No 106
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=93.76 E-value=0.13 Score=49.94 Aligned_cols=56 Identities=14% Similarity=0.016 Sum_probs=45.5
Q ss_pred cchHHHHHHHHH-cCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhh
Q 018523 97 RLCLPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 154 (354)
Q Consensus 97 ~l~~~l~~~l~~-~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 154 (354)
.+.+.|.+.+++ .|++| ++++|++|..+ ++++.+|.+.+|.++.||.||+|+....
T Consensus 124 ~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e-~g~V~GV~t~dG~~i~AdaVVLATG~~s 180 (637)
T 2zxi_A 124 RYREYMKKVCENQENLYI-KQEEVVDIIVK-NNQVVGVRTNLGVEYKTKAVVVTTGTFL 180 (637)
T ss_dssp HHHHHHHHHHHTCTTEEE-EESCEEEEEES-SSBEEEEEETTSCEEECSEEEECCTTCB
T ss_pred HHHHHHHHHHHhCCCCEE-EEeEEEEEEec-CCEEEEEEECCCcEEEeCEEEEccCCCc
Confidence 466777777777 58899 68899999884 5667789998898999999999988643
No 107
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=93.70 E-value=0.036 Score=50.89 Aligned_cols=55 Identities=15% Similarity=0.194 Sum_probs=40.9
Q ss_pred cchHHHHHHHHHcCCEEEecceee---------EEEecCCCCEEEEEEcCCeEEEcCEEEEccChhh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQ---------KIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 154 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~---------~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 154 (354)
.+...|.+.+++.|++|+.+++|+ +|..+ ++.+ +|++.+| +++||.||.|+..+.
T Consensus 173 ~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~-~~~v-~v~~~~g-~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 173 SLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVT-NTHQ-IVVHETR-QIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC---------CBCCE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEee-CCeE-EEEECCc-EEECCEEEECCCccH
Confidence 578888888888899999999999 88874 4445 5776555 899999999988753
No 108
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=93.66 E-value=0.34 Score=43.16 Aligned_cols=187 Identities=13% Similarity=0.038 Sum_probs=96.5
Q ss_pred ccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhhHhhhCCcchhhhHHHHHhhcc
Q 018523 96 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKL 175 (354)
Q Consensus 96 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~l~~ll~~~~~~~~~~~~~~~~ 175 (354)
..+...|.+.+++.|++|+. ++|++|+.. + .++||.||+|+..+.- .+++..
T Consensus 142 ~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~-~------------~~~a~~VV~A~G~~s~-~l~~~~------------- 193 (351)
T 3g3e_A 142 KNYLQWLTERLTERGVKFFQ-RKVESFEEV-A------------REGADVIVNCTGVWAG-ALQRDP------------- 193 (351)
T ss_dssp HHHHHHHHHHHHHTTCEEEE-CCCCCHHHH-H------------HTTCSEEEECCGGGGG-GTSCCT-------------
T ss_pred HHHHHHHHHHHHHCCCEEEE-EEeCCHHHh-h------------cCCCCEEEECCCcChH-hhcCCC-------------
Confidence 36788888888889999998 999887642 1 1468999999887653 333321
Q ss_pred CCccEEEEEEEeccccccccCceeeccCcc----cchhcccccccccccC-CCCcEEEEEecCCCCCCCCChHHHHHHHH
Q 018523 176 VGVPVINIHIWFDRKLKNTYDHLLFSRSSL----LSVYADMSLTCKEYYN-PNQSMLELVFAPAEEWISCSDSEIIDATM 250 (354)
Q Consensus 176 ~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~s~~~~~~~~-~g~~~l~~~~~~~~~~~~~~~ee~~~~~~ 250 (354)
+..+.-...+.++.+ . ....++...+. ..+| . .| .+.-+++.+.. ...+....+++..+.++
T Consensus 194 ~l~p~rg~~~~~~~~-~--~~~~~~~~~~~~~~~~~~y-----~----~p~~~~~~iGg~~~-~~~~~~~~~~~~~~~l~ 260 (351)
T 3g3e_A 194 LLQPGRGQIMKVDAP-W--MKHFILTHDPERGIYNSPY-----I----IPGTQTVTLGGIFQ-LGNWSELNNIQDHNTIW 260 (351)
T ss_dssp TCEEEEEEEEEEECT-T--CCSEEEECCTTTCTTCSCE-----E----EECSSCEEEECCCE-ETCCCCSCCHHHHHHHH
T ss_pred ceeecCCcEEEEeCC-C--cceEEEeccccCCCCceeE-----E----EeCCCcEEEeeeee-cCCCCCCCCHHHHHHHH
Confidence 111111122233322 1 11222211100 0011 0 11 12222221111 12232334566678899
Q ss_pred HHHHHhCCCCccccccccceeEEEEEEeCCCccccCCCCCCC-CC-CCCCC-CCceEEeeccccCCCCCchhHHHHHHHH
Q 018523 251 KELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPC-RP-LQRSP-VEGFYLAGDYTKQKYLASMEGAVLSGKL 327 (354)
Q Consensus 251 ~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~-~~~~~-~~~L~~aG~~~~~~~~~~~~gAi~sG~~ 327 (354)
+.+.+++|.+.+ ..+...+ . +....+|+ ... .+ .-+.| .+|||++..+.+ .|+.-|-..|+.
T Consensus 261 ~~~~~~~P~l~~-----~~i~~~w-~----G~r~~t~D-~p~~~~~ig~~~~~~~~~~~~G~~g----~G~~~ap~~g~~ 325 (351)
T 3g3e_A 261 EGCCRLEPTLKN-----ARIIGER-T----GFRPVRPQ-IRLEREQLRTGPSNTEVIHNYGHGG----YGLTIHWGCALE 325 (351)
T ss_dssp HHHHHHCGGGGG-----CEEEEEE-E----EEEEECSS-CEEEEEEECCSSSCEEEEEEECCTT----CHHHHHHHHHHH
T ss_pred HHHHHhCCCccC-----CcEeeee-E----eeCCCCCC-ccceeeeccCCCCCCeEEEEeCCCc----chHhhhHHHHHH
Confidence 999999997642 2232221 1 11122333 110 00 01122 478988875433 367777888999
Q ss_pred HHHHHHHHhhh
Q 018523 328 CAQAIVQDYVL 338 (354)
Q Consensus 328 aa~~il~~~~~ 338 (354)
.|+.|.+.+..
T Consensus 326 la~li~~~~~~ 336 (351)
T 3g3e_A 326 AAKLFGRILEE 336 (351)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999887754
No 109
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=93.61 E-value=0.14 Score=50.27 Aligned_cols=58 Identities=12% Similarity=0.135 Sum_probs=46.0
Q ss_pred ccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEE---cCCe--EEEcCEEEEccChhh
Q 018523 96 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGN--VIDGDAYVFATPVDI 154 (354)
Q Consensus 96 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~---~~g~--~~~ad~VI~a~p~~~ 154 (354)
..|...|.+.+.+.|++|+.+++|++|..+ +++|.+|.+ .+|+ .+.|++||+|+....
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~-~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 220 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIHQ-DGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYG 220 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEE-TTEEEEEEEEETTTCCEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEec-CCEEEEEEEEECCCCcEEEEEcCEEEEccCcch
Confidence 367888888888889999999999999874 566777765 3565 489999999876643
No 110
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=93.60 E-value=0.16 Score=46.63 Aligned_cols=50 Identities=24% Similarity=0.288 Sum_probs=41.6
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccCh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 152 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 152 (354)
.+.+.+.+.+++.|++|+++++|++|. + + +|++.+|+++.+|.||++++.
T Consensus 188 ~~~~~l~~~l~~~GV~i~~~~~v~~i~-~--~---~v~~~~g~~i~~D~vi~a~G~ 237 (408)
T 2gqw_A 188 TLADFVARYHAAQGVDLRFERSVTGSV-D--G---VVLLDDGTRIAADMVVVGIGV 237 (408)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEE-T--T---EEEETTSCEEECSEEEECSCE
T ss_pred HHHHHHHHHHHHcCcEEEeCCEEEEEE-C--C---EEEECCCCEEEcCEEEECcCC
Confidence 455667777888999999999999998 3 3 377788889999999999876
No 111
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=93.57 E-value=0.15 Score=48.83 Aligned_cols=55 Identities=20% Similarity=0.390 Sum_probs=43.8
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEec------------------CCCCEEEEEEcCCeEEEcCEEEEccCh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELN------------------DDGTVKNFLLTNGNVIDGDAYVFATPV 152 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~------------------~~g~v~~V~~~~g~~~~ad~VI~a~p~ 152 (354)
.+.+.+.+.+++.|++++++++|++|..+ +++.+ .+++.+|+++.+|.||+++..
T Consensus 193 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~g~~i~~D~vi~a~G~ 265 (565)
T 3ntd_A 193 EMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHL-SLTLSNGELLETDLLIMAIGV 265 (565)
T ss_dssp HHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEE-EEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcE-EEEEcCCCEEEcCEEEECcCC
Confidence 45566677788899999999999999873 24445 377788889999999998865
No 112
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=93.53 E-value=0.15 Score=46.09 Aligned_cols=57 Identities=25% Similarity=0.342 Sum_probs=45.6
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhh-Hhhh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI-LKLQ 158 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~-l~~l 158 (354)
.|.+.|.+.+++.|++|+++++|++|+. ++ .|++.+|+++++|.||.|..... +++.
T Consensus 108 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~---~v~~~~g~~~~ad~vV~AdG~~s~vr~~ 165 (379)
T 3alj_A 108 HLHDALVNRARALGVDISVNSEAVAADP--VG---RLTLQTGEVLEADLIVGADGVGSKVRDS 165 (379)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEET--TT---EEEETTSCEEECSEEEECCCTTCHHHHH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC---EEEECCCCEEEcCEEEECCCccHHHHHH
Confidence 5677788888888999999999999986 44 37788888899999999887643 3443
No 113
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=93.45 E-value=0.11 Score=50.41 Aligned_cols=57 Identities=11% Similarity=0.059 Sum_probs=45.7
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEc---CCe--EEEcCEEEEccChhh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NGN--VIDGDAYVFATPVDI 154 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~---~g~--~~~ad~VI~a~p~~~ 154 (354)
.|...|.+.+.+.|++|+.+++|++|..+ +++|.+|.+. +|+ ++.|++||+|+....
T Consensus 156 ~l~~~L~~~~~~~gv~i~~~~~v~~Li~~-~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 156 SLLHTLYGRSLRYDTSYFVEYFALDLLME-NGECRGVIALCIEDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp HHHHHHHHHHTTSCCEEEETEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHhCCCEEEEceEEEEEEEE-CCEEEEEEEEEcCCCcEEEEEcCeEEECCCccc
Confidence 67788888877889999999999999984 6677777763 564 689999999887643
No 114
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=93.44 E-value=0.16 Score=44.11 Aligned_cols=56 Identities=11% Similarity=0.110 Sum_probs=41.4
Q ss_pred cchHHHHHHHHH-cCCEEEecceeeEEEecCCCCEEEEEEc---------CC-----eEEEcCEEEEccChh
Q 018523 97 RLCLPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLT---------NG-----NVIDGDAYVFATPVD 153 (354)
Q Consensus 97 ~l~~~l~~~l~~-~g~~i~~~~~V~~I~~~~~g~v~~V~~~---------~g-----~~~~ad~VI~a~p~~ 153 (354)
.+...+.+.+.+ .|++++++++|++|..+ ++++.+|.+. +| .+++||.||.|+...
T Consensus 120 ~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~-~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~ 190 (284)
T 1rp0_A 120 LFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHD 190 (284)
T ss_dssp HHHHHHHHHHHTSTTEEEEETEEEEEEEEE-TTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSS
T ss_pred HHHHHHHHHHHhcCCCEEEcCcEEEEEEec-CCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCc
Confidence 355566666655 69999999999999975 4556566653 22 578999999988753
No 115
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=93.40 E-value=0.11 Score=49.33 Aligned_cols=61 Identities=13% Similarity=0.046 Sum_probs=43.3
Q ss_pred cchHHHHHHHHHcC-CEEEecceeeEEEecCCC-CEEEEEEc--CC-----eEEEcCEEEEccChhhHhh
Q 018523 97 RLCLPIVEHIQSLG-GEVRLNSRVQKIELNDDG-TVKNFLLT--NG-----NVIDGDAYVFATPVDILKL 157 (354)
Q Consensus 97 ~l~~~l~~~l~~~g-~~i~~~~~V~~I~~~~~g-~v~~V~~~--~g-----~~~~ad~VI~a~p~~~l~~ 157 (354)
....++.+.+.+.| .+|+++++|++|..++++ ++++|++. +| .++.|+.||+++..-....
T Consensus 222 s~~~~~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s~~ 291 (504)
T 1n4w_A 222 SLDKTYLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGSTE 291 (504)
T ss_dssp CTTTTHHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHHHH
T ss_pred CHHHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCCHH
Confidence 33444444445565 899999999999986434 68888874 56 3578999999887754443
No 116
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=93.39 E-value=0.15 Score=48.30 Aligned_cols=62 Identities=15% Similarity=0.099 Sum_probs=46.5
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEE--cCCe--EEEcCEEEEccChh-hHhhhC
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL--TNGN--VIDGDAYVFATPVD-ILKLQL 159 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~--~~g~--~~~ad~VI~a~p~~-~l~~ll 159 (354)
.+.+.|.+.+++.|++|+.+++|++|..+ ++.+.+|++ .+|+ +++||.||.|.... .+++.+
T Consensus 112 ~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~-~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S~vr~~l 178 (512)
T 3e1t_A 112 RFDDMLLRNSERKGVDVRERHEVIDVLFE-GERAVGVRYRNTEGVELMAHARFIVDASGNRTRVSQAV 178 (512)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEE-TTEEEEEEEECSSSCEEEEEEEEEEECCCTTCSSGGGT
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEE-CCEEEEEEEEeCCCCEEEEEcCEEEECCCcchHHHHHc
Confidence 56677777777889999999999999985 555655555 3464 78999999988774 344444
No 117
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=93.37 E-value=0.14 Score=49.72 Aligned_cols=57 Identities=9% Similarity=0.056 Sum_probs=45.6
Q ss_pred cchHHHHHHHHH-cCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhhH
Q 018523 97 RLCLPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDIL 155 (354)
Q Consensus 97 ~l~~~l~~~l~~-~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~l 155 (354)
.+...|.+.+++ .|++| ++++|+.|..+ +++|.+|.+.+|.+++||.||+|+.....
T Consensus 125 ~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e-~g~V~GV~t~dG~~I~Ad~VVLATGt~s~ 182 (651)
T 3ces_A 125 LYRQAVRTALENQPNLMI-FQQAVEDLIVE-NDRVVGAVTQMGLKFRAKAVVLTVGTFLD 182 (651)
T ss_dssp HHHHHHHHHHHTCTTEEE-EECCEEEEEES-SSBEEEEEETTSEEEEEEEEEECCSTTTC
T ss_pred HHHHHHHHHHHhCCCCEE-EEEEEEEEEec-CCEEEEEEECCCCEEECCEEEEcCCCCcc
Confidence 456777777777 58899 67899999884 56677899988988999999998887543
No 118
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=93.37 E-value=0.19 Score=47.06 Aligned_cols=56 Identities=18% Similarity=0.280 Sum_probs=42.8
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEE-----cCCeEEEcCEEEEccChh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL-----TNGNVIDGDAYVFATPVD 153 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~-----~~g~~~~ad~VI~a~p~~ 153 (354)
.+.+.+.+.+++.|++|+++++|++|..++++.+ .|++ .+++++.+|.||+++...
T Consensus 221 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~i~~D~vv~a~G~~ 281 (474)
T 1zmd_A 221 EISKNFQRILQKQGFKFKLNTKVTGATKKSDGKI-DVSIEAASGGKAEVITCDVLLVCIGRR 281 (474)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTSCE-EEEEEETTSCCCEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHCCCEEEeCceEEEEEEcCCceE-EEEEEecCCCCceEEEcCEEEECcCCC
Confidence 4556677788889999999999999998544424 3553 356789999999998763
No 119
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=93.20 E-value=0.13 Score=47.07 Aligned_cols=51 Identities=18% Similarity=0.245 Sum_probs=42.2
Q ss_pred ccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccCh
Q 018523 96 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 152 (354)
Q Consensus 96 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 152 (354)
..+.+.+.+.+++.|++++++++|++|.. ++ |++.+|+++.+|.||++++.
T Consensus 218 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~~--~~----v~~~~g~~~~~D~vi~a~G~ 268 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIKLVHNFKIKEIRE--HE----IVDEKGNTIPADITILLPPY 268 (409)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEECS--SE----EEETTSCEEECSEEEEECCE
T ss_pred HHHHHHHHHHHHHCCCEEEcCCceEEECC--Ce----EEECCCCEEeeeEEEECCCC
Confidence 35667777888889999999999999974 32 67788999999999999775
No 120
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=93.16 E-value=0.23 Score=43.50 Aligned_cols=52 Identities=17% Similarity=0.199 Sum_probs=40.0
Q ss_pred HHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEc---CCe--EEEcCEEEEccCh
Q 018523 100 LPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NGN--VIDGDAYVFATPV 152 (354)
Q Consensus 100 ~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~---~g~--~~~ad~VI~a~p~ 152 (354)
..+.+.+.+.|++++++++|++|..+ ++++.+|++. +|+ ++.+|.||++++.
T Consensus 194 ~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (319)
T 3cty_A 194 NAYVQEIKKRNIPYIMNAQVTEIVGD-GKKVTGVKYKDRTTGEEKLIETDGVFIYVGL 250 (319)
T ss_dssp HHHHHHHHHTTCCEECSEEEEEEEES-SSSEEEEEEEETTTCCEEEECCSEEEECCCE
T ss_pred HHHHHHHhcCCcEEEcCCeEEEEecC-CceEEEEEEEEcCCCceEEEecCEEEEeeCC
Confidence 55677777889999999999999974 4546566664 564 6899999998654
No 121
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=93.10 E-value=0.23 Score=46.46 Aligned_cols=55 Identities=15% Similarity=0.170 Sum_probs=42.9
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCC---eEEEcCEEEEccChh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG---NVIDGDAYVFATPVD 153 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g---~~~~ad~VI~a~p~~ 153 (354)
.+.+.+.+.+++.|++++++++|++|..+ ++.+ .|++.++ +++.+|.||++++..
T Consensus 222 ~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~-~~~~-~v~~~~~~g~~~~~~D~vi~a~G~~ 279 (476)
T 3lad_A 222 QVAKEAQKILTKQGLKILLGARVTGTEVK-NKQV-TVKFVDAEGEKSQAFDKLIVAVGRR 279 (476)
T ss_dssp HHHHHHHHHHHHTTEEEEETCEEEEEEEC-SSCE-EEEEESSSEEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEEc-CCEE-EEEEEeCCCcEEEECCEEEEeeCCc
Confidence 45667777788899999999999999985 3335 3666654 578999999998763
No 122
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=93.07 E-value=0.19 Score=48.02 Aligned_cols=57 Identities=12% Similarity=0.100 Sum_probs=45.2
Q ss_pred cchHHHHHHHHHcCC--EEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChh
Q 018523 97 RLCLPIVEHIQSLGG--EVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 153 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~--~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 153 (354)
.+.+.+.+.+++.|. +|+++++|+++..++++....|++.+|++++||.||+|+...
T Consensus 88 ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~ 146 (540)
T 3gwf_A 88 EILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLL 146 (540)
T ss_dssp HHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSC
T ss_pred HHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCccc
Confidence 566666666777787 899999999999865533335888889889999999998853
No 123
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=93.05 E-value=0.097 Score=50.04 Aligned_cols=59 Identities=14% Similarity=0.023 Sum_probs=42.8
Q ss_pred ccchHHHHHHHHH-cCCEEEecceeeEEEecCCC------CEEEEEEc---CCe--EEEcCEEEEccChhh
Q 018523 96 ERLCLPIVEHIQS-LGGEVRLNSRVQKIELNDDG------TVKNFLLT---NGN--VIDGDAYVFATPVDI 154 (354)
Q Consensus 96 ~~l~~~l~~~l~~-~g~~i~~~~~V~~I~~~~~g------~v~~V~~~---~g~--~~~ad~VI~a~p~~~ 154 (354)
..+.+.|.+.+++ .|++|+.+++|++|..++++ +|.+|.+. +|+ ++.|+.||+|+....
T Consensus 138 ~~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 208 (540)
T 1chu_A 138 REVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGAS 208 (540)
T ss_dssp ----CCCHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcc
Confidence 3566777777777 69999999999999974334 67777765 565 689999999886643
No 124
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=93.00 E-value=0.2 Score=46.87 Aligned_cols=56 Identities=14% Similarity=0.281 Sum_probs=41.7
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEc-----CCeEEEcCEEEEccCh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT-----NGNVIDGDAYVFATPV 152 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~-----~g~~~~ad~VI~a~p~ 152 (354)
.+.+.+.+.+++.|++|+++++|++|..++++....|++. +++++.+|.||+++..
T Consensus 225 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 285 (478)
T 1v59_A 225 EVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGR 285 (478)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCC
Confidence 3566777788889999999999999986212223346665 3467899999999875
No 125
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=92.99 E-value=0.24 Score=46.64 Aligned_cols=62 Identities=19% Similarity=0.279 Sum_probs=46.3
Q ss_pred ceeeeecCCCcccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChh
Q 018523 85 SKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 153 (354)
Q Consensus 85 ~~~~~~~Gg~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 153 (354)
....++.||. . .+.+.+++.|++|+++++|++|..+ + .+.+|++.+|+++.+|.||+++...
T Consensus 251 ~~vvViGgG~--~---gle~~l~~~GV~v~~~~~v~~i~~~-~-~v~~v~~~~g~~i~aD~Vv~a~G~~ 312 (493)
T 1y56_A 251 RKVAVTGSKA--D---EVIQELERWGIDYVHIPNVKRVEGN-E-KVERVIDMNNHEYKVDALIFADGRR 312 (493)
T ss_dssp SEEEEESTTH--H---HHHHHHHHHTCEEEECSSEEEEECS-S-SCCEEEETTCCEEECSEEEECCCEE
T ss_pred CEEEEECCCH--H---HHHHHHHhCCcEEEeCCeeEEEecC-C-ceEEEEeCCCeEEEeCEEEECCCcC
Confidence 3455566663 1 3336677889999999999999863 3 3546778888899999999998763
No 126
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=92.97 E-value=0.19 Score=48.07 Aligned_cols=57 Identities=14% Similarity=0.191 Sum_probs=44.4
Q ss_pred cchHHHHHHHHHcCC--EEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChh
Q 018523 97 RLCLPIVEHIQSLGG--EVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 153 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~--~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 153 (354)
.+.+.+.+.+++.|. +|+++++|+++..++++....|++.+|++++||.||+|+...
T Consensus 100 ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~ 158 (549)
T 4ap3_A 100 EILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPL 158 (549)
T ss_dssp HHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSE
T ss_pred HHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCC
Confidence 455666666667776 899999999999865533335888889889999999998853
No 127
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=92.96 E-value=0.17 Score=47.62 Aligned_cols=53 Identities=17% Similarity=0.291 Sum_probs=41.9
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccCh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 152 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 152 (354)
.+.+.+.+.+++.|++|+++++|++|.. ++++..|.+ +|+++.+|.||++++.
T Consensus 237 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~v~~v~~-~g~~i~~D~Vi~a~G~ 289 (490)
T 2bc0_A 237 DLTDLMAKNMEEHGIQLAFGETVKEVAG--NGKVEKIIT-DKNEYDVDMVILAVGF 289 (490)
T ss_dssp HHHHHHHHHHHTTTCEEEETCCEEEEEC--SSSCCEEEE-SSCEEECSEEEECCCE
T ss_pred HHHHHHHHHHHhCCeEEEeCCEEEEEEc--CCcEEEEEE-CCcEEECCEEEECCCC
Confidence 4556677778889999999999999986 344434665 6778999999999875
No 128
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=92.93 E-value=0.17 Score=44.95 Aligned_cols=57 Identities=14% Similarity=-0.083 Sum_probs=43.9
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhhH
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDIL 155 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~l 155 (354)
.+.+.+.+.+++.|.+++++++|++|..+ ++.+.+|++.+| +++||+||+|+....-
T Consensus 77 ~~~~~l~~~~~~~~~~~~~~~~v~~i~~~-~~~~~~v~~~~g-~~~~d~vV~AtG~~~~ 133 (357)
T 4a9w_A 77 EVLAYLAQYEQKYALPVLRPIRVQRVSHF-GERLRVVARDGR-QWLARAVISATGTWGE 133 (357)
T ss_dssp HHHHHHHHHHHHTTCCEECSCCEEEEEEE-TTEEEEEETTSC-EEEEEEEEECCCSGGG
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEEC-CCcEEEEEeCCC-EEEeCEEEECCCCCCC
Confidence 45666667777789999999999999985 343422777666 8999999999986543
No 129
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=92.87 E-value=0.26 Score=46.01 Aligned_cols=55 Identities=15% Similarity=0.172 Sum_probs=41.6
Q ss_pred cchHHHHHHH-HHcCCEEEecceeeEEEecCCCCEEEEEEc--CC--eEEEcCEEEEccChh
Q 018523 97 RLCLPIVEHI-QSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NG--NVIDGDAYVFATPVD 153 (354)
Q Consensus 97 ~l~~~l~~~l-~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~--~g--~~~~ad~VI~a~p~~ 153 (354)
.+.+.+.+.+ ++.|++|+++++|++|..++++ + .|++. +| +++.+|.||+++...
T Consensus 216 ~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~-~-~v~~~~~~g~~~~i~~D~vv~a~G~~ 275 (468)
T 2qae_A 216 DVTNALVGALAKNEKMKFMTSTKVVGGTNNGDS-V-SLEVEGKNGKRETVTCEALLVSVGRR 275 (468)
T ss_dssp HHHHHHHHHHHHHTCCEEECSCEEEEEEECSSS-E-EEEEECC---EEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCe-E-EEEEEcCCCceEEEECCEEEECCCcc
Confidence 3456777888 8899999999999999975333 4 36665 56 578999999998763
No 130
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=92.85 E-value=0.14 Score=49.36 Aligned_cols=53 Identities=25% Similarity=0.335 Sum_probs=43.4
Q ss_pred ccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccCh
Q 018523 96 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 152 (354)
Q Consensus 96 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 152 (354)
..+.+.+.+.+++.|++|+++++|++|..+ ++ +|++.+|+++.+|.||++++.
T Consensus 228 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~---~v~~~~g~~i~~D~Vi~a~G~ 280 (588)
T 3ics_A 228 YEMAAYVHEHMKNHDVELVFEDGVDALEEN-GA---VVRLKSGSVIQTDMLILAIGV 280 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEGG-GT---EEEETTSCEEECSEEEECSCE
T ss_pred HHHHHHHHHHHHHcCCEEEECCeEEEEecC-CC---EEEECCCCEEEcCEEEEccCC
Confidence 345677778888899999999999999864 33 367788889999999998865
No 131
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=92.81 E-value=0.21 Score=48.30 Aligned_cols=57 Identities=16% Similarity=0.161 Sum_probs=44.7
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEc-CC--eEEEcCEEEEccChhh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT-NG--NVIDGDAYVFATPVDI 154 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~-~g--~~~~ad~VI~a~p~~~ 154 (354)
.+...|.+.+++.|++|+.+++|++|..+ ++.+.+|++. +| .+++||.||.|.....
T Consensus 129 ~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~-~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 129 EFDKLLLDEARSRGITVHEETPVTDVDLS-DPDRVVLTVRRGGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEECC-STTCEEEEEEETTEEEEEEESEEEECCGGGC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEc-CCCEEEEEEecCCceEEEEcCEEEECCCCcc
Confidence 46677777777889999999999999975 3334467776 66 5789999999887744
No 132
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=92.78 E-value=0.18 Score=44.29 Aligned_cols=56 Identities=13% Similarity=0.233 Sum_probs=43.8
Q ss_pred ccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChh
Q 018523 96 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 153 (354)
Q Consensus 96 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 153 (354)
..+.+.+.+.+++.|.+++++++|++|..++++.+ .|.+.+|+ +.+|+||+|+...
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~-~v~~~~g~-~~~d~vVlAtG~~ 122 (332)
T 3lzw_A 67 QELINNLKEQMAKFDQTICLEQAVESVEKQADGVF-KLVTNEET-HYSKTVIITAGNG 122 (332)
T ss_dssp HHHHHHHHHHHTTSCCEEECSCCEEEEEECTTSCE-EEEESSEE-EEEEEEEECCTTS
T ss_pred HHHHHHHHHHHHHhCCcEEccCEEEEEEECCCCcE-EEEECCCE-EEeCEEEECCCCC
Confidence 35666677777778999999999999998655344 47887775 9999999998873
No 133
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=92.68 E-value=0.23 Score=46.39 Aligned_cols=54 Identities=15% Similarity=0.139 Sum_probs=42.2
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEc-C--Ce--EEEcCEEEEccCh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT-N--GN--VIDGDAYVFATPV 152 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~-~--g~--~~~ad~VI~a~p~ 152 (354)
.+.+.+.+.+++.|++++++++|++|..+ ++.+ .|++. + |+ ++.+|.||+++..
T Consensus 211 ~~~~~l~~~l~~~gV~i~~~~~v~~i~~~-~~~~-~v~~~~~~~g~~~~i~~D~vv~a~G~ 269 (464)
T 2eq6_A 211 ETAALLRRALEKEGIRVRTKTKAVGYEKK-KDGL-HVRLEPAEGGEGEEVVVDKVLVAVGR 269 (464)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEEE-TTEE-EEEEEETTCCSCEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHhcCCEEEcCCEEEEEEEe-CCEE-EEEEeecCCCceeEEEcCEEEECCCc
Confidence 35566777788899999999999999975 3334 36665 6 76 7899999999865
No 134
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=92.48 E-value=0.16 Score=48.16 Aligned_cols=61 Identities=16% Similarity=0.111 Sum_probs=42.9
Q ss_pred cchHHHHHHHHHcC-CEEEecceeeEEEecCCC-CEEEEEEc--CC-----eEEEcCEEEEccChhhHhh
Q 018523 97 RLCLPIVEHIQSLG-GEVRLNSRVQKIELNDDG-TVKNFLLT--NG-----NVIDGDAYVFATPVDILKL 157 (354)
Q Consensus 97 ~l~~~l~~~l~~~g-~~i~~~~~V~~I~~~~~g-~v~~V~~~--~g-----~~~~ad~VI~a~p~~~l~~ 157 (354)
....++.....+.+ .+|+++++|++|..++++ ++++|++. +| .++.|+.||+++..-....
T Consensus 227 s~~~~~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~sp~ 296 (507)
T 1coy_A 227 SLDKTYLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSK 296 (507)
T ss_dssp CTTTTHHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHHHH
T ss_pred ChHHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCCHH
Confidence 33444444444554 899999999999986545 68888875 45 3578999999887754443
No 135
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=92.47 E-value=0.31 Score=45.43 Aligned_cols=54 Identities=17% Similarity=0.261 Sum_probs=41.7
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEc-CC--eEEEcCEEEEccCh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT-NG--NVIDGDAYVFATPV 152 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~-~g--~~~~ad~VI~a~p~ 152 (354)
.+.+.+.+.+++.|++++++++|++|..++ +.+ .|++. +| +++.+|.||+++..
T Consensus 213 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~~-~v~~~~~g~~~~~~~D~vv~a~G~ 269 (464)
T 2a8x_A 213 DVSKEIEKQFKKLGVTILTATKVESIADGG-SQV-TVTVTKDGVAQELKAEKVLQAIGF 269 (464)
T ss_dssp HHHHHHHHHHHHHTCEEECSCEEEEEEECS-SCE-EEEEESSSCEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHcCCEEEeCcEEEEEEEcC-CeE-EEEEEcCCceEEEEcCEEEECCCC
Confidence 345667777888999999999999999753 335 36664 56 67899999999875
No 136
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=92.45 E-value=0.36 Score=42.49 Aligned_cols=53 Identities=11% Similarity=0.043 Sum_probs=40.3
Q ss_pred chHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEc---CC--eEEEcCEEEEccCh
Q 018523 98 LCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NG--NVIDGDAYVFATPV 152 (354)
Q Consensus 98 l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~---~g--~~~~ad~VI~a~p~ 152 (354)
+.+.+.+.+++.|++++++++|++|..+ +++.+|++. +| +++.+|.||++++.
T Consensus 193 ~~~~l~~~l~~~gv~v~~~~~v~~i~~~--~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (335)
T 2zbw_A 193 SVKELMKAHEEGRLEVLTPYELRRVEGD--ERVRWAVVFHNQTQEELALEVDAVLILAGY 250 (335)
T ss_dssp HHHHHHHHHHTTSSEEETTEEEEEEEES--SSEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred HHHHHHhccccCCeEEecCCcceeEccC--CCeeEEEEEECCCCceEEEecCEEEEeecC
Confidence 4455666666679999999999999973 345456665 67 57899999998775
No 137
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=92.40 E-value=0.18 Score=45.08 Aligned_cols=54 Identities=17% Similarity=0.212 Sum_probs=41.6
Q ss_pred chHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEc--CC--eEEEcCEEEEccCh
Q 018523 98 LCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NG--NVIDGDAYVFATPV 152 (354)
Q Consensus 98 l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~--~g--~~~~ad~VI~a~p~ 152 (354)
+.+.+.+.+++.|++++++++|++|..+ ++++.+|++. +| +++.+|.||++++.
T Consensus 204 ~~~~l~~~~~~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~ 261 (360)
T 3ab1_A 204 TAHEVERARANGTIDVYLETEVASIEES-NGVLTRVHLRSSDGSKWTVEADRLLILIGF 261 (360)
T ss_dssp HHHSSHHHHHHTSEEEESSEEEEEEEEE-TTEEEEEEEEETTCCEEEEECSEEEECCCB
T ss_pred HHHHHHHHhhcCceEEEcCcCHHHhccC-CCceEEEEEEecCCCeEEEeCCEEEECCCC
Confidence 4555666667788999999999999974 4555556664 67 57899999999875
No 138
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=92.38 E-value=0.21 Score=43.54 Aligned_cols=49 Identities=8% Similarity=-0.004 Sum_probs=37.2
Q ss_pred HHHHHHcCCEEEecceeeEEEecCCCCEEEEEEc--CCe--EEEcCEEEEccCh
Q 018523 103 VEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NGN--VIDGDAYVFATPV 152 (354)
Q Consensus 103 ~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~--~g~--~~~ad~VI~a~p~ 152 (354)
.+.+++.|++++++++|++|..+ ++++.+|++. +|+ ++.+|.||++++.
T Consensus 190 ~~~~~~~gv~~~~~~~v~~i~~~-~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~ 242 (315)
T 3r9u_A 190 EKVKKNEKIELITSASVDEVYGD-KMGVAGVKVKLKDGSIRDLNVPGIFTFVGL 242 (315)
T ss_dssp HHHHHCTTEEEECSCEEEEEEEE-TTEEEEEEEECTTSCEEEECCSCEEECSCE
T ss_pred HHHHhcCCeEEEeCcEEEEEEcC-CCcEEEEEEEcCCCCeEEeecCeEEEEEcC
Confidence 33345789999999999999874 4456567665 775 7889999998664
No 139
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=92.25 E-value=0.14 Score=46.60 Aligned_cols=49 Identities=14% Similarity=0.117 Sum_probs=39.3
Q ss_pred HHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccCh
Q 018523 100 LPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 152 (354)
Q Consensus 100 ~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 152 (354)
....+.+++.|.+++++++|++|..+ ++ .|++.+|+++.+|+||+|+..
T Consensus 66 ~~~~~~~~~~~i~~~~~~~V~~id~~-~~---~v~~~~g~~~~yd~lvlAtG~ 114 (385)
T 3klj_A 66 IKKNDWYEKNNIKVITSEFATSIDPN-NK---LVTLKSGEKIKYEKLIIASGS 114 (385)
T ss_dssp SSCHHHHHHTTCEEECSCCEEEEETT-TT---EEEETTSCEEECSEEEECCCE
T ss_pred CCCHHHHHHCCCEEEeCCEEEEEECC-CC---EEEECCCCEEECCEEEEecCC
Confidence 33445556789999999999999973 33 378888999999999999875
No 140
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=92.13 E-value=0.26 Score=44.08 Aligned_cols=55 Identities=15% Similarity=-0.031 Sum_probs=41.9
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 154 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 154 (354)
.+.+.+.+.+++.|.+++++++|++|..++++ + .|.+.+| ++.||+||+|+....
T Consensus 89 ~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~-~-~v~~~~g-~~~~d~vVlAtG~~~ 143 (369)
T 3d1c_A 89 TYAEYLQVVANHYELNIFENTVVTNISADDAY-Y-TIATTTE-TYHADYIFVATGDYN 143 (369)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECSSS-E-EEEESSC-CEEEEEEEECCCSTT
T ss_pred HHHHHHHHHHHHcCCeEEeCCEEEEEEECCCe-E-EEEeCCC-EEEeCEEEECCCCCC
Confidence 34555666667789999999999999985444 4 3777666 689999999988754
No 141
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=92.10 E-value=0.32 Score=45.52 Aligned_cols=55 Identities=20% Similarity=0.204 Sum_probs=42.7
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCC-CEEEEEEcC---C----eEEEcCEEEEccCh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDG-TVKNFLLTN---G----NVIDGDAYVFATPV 152 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g-~v~~V~~~~---g----~~~~ad~VI~a~p~ 152 (354)
.+.+.+.+.+++.|++|+++++|++|..++++ .+ .|++.+ | +++.+|.||+++..
T Consensus 229 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~-~v~~~~~~~g~~~g~~~~~D~vi~a~G~ 291 (478)
T 3dk9_A 229 MISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEV-SMVTAVPGRLPVMTMIPDVDCLLWAIGR 291 (478)
T ss_dssp HHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEE-EEEECCTTSCCEEEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEE-EEEEccCCCCcccceEEEcCEEEEeecc
Confidence 45566777788899999999999999975555 34 466654 2 57899999999876
No 142
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=92.04 E-value=0.22 Score=48.19 Aligned_cols=57 Identities=19% Similarity=0.169 Sum_probs=44.9
Q ss_pred cchHHHHHHHHHcC-CEEEecceeeEEEecCCCCEEEEEE---cCCe--EEEcCEEEEccChhh
Q 018523 97 RLCLPIVEHIQSLG-GEVRLNSRVQKIELNDDGTVKNFLL---TNGN--VIDGDAYVFATPVDI 154 (354)
Q Consensus 97 ~l~~~l~~~l~~~g-~~i~~~~~V~~I~~~~~g~v~~V~~---~~g~--~~~ad~VI~a~p~~~ 154 (354)
.|...|.+.+.+.| ++|+.+++|++|..+ +++|.+|.+ .+|+ ++.|+.||+|+....
T Consensus 135 ~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~-~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s 197 (602)
T 1kf6_A 135 HMLHTLFQTSLQFPQIQRFDEHFVLDILVD-DGHVRGLVAMNMMEGTLVQIRANAVVMATGGAG 197 (602)
T ss_dssp HHHHHHHHHHTTCTTEEEEETEEEEEEEEE-TTEEEEEEEEETTTTEEEEEECSCEEECCCCCG
T ss_pred HHHHHHHHHHHhCCCcEEEeCCEEEEEEEe-CCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCc
Confidence 57788888777788 999999999999985 566766654 4675 689999999887643
No 143
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=91.99 E-value=0.26 Score=45.78 Aligned_cols=55 Identities=22% Similarity=0.270 Sum_probs=41.8
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEc---CCeEEEcCEEEEccChh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NGNVIDGDAYVFATPVD 153 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~---~g~~~~ad~VI~a~p~~ 153 (354)
.+.+.+.+.+++.|++|+++++|++|..++++ + .|++. +++++.+|.||+++...
T Consensus 212 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~-~-~v~~~~~g~~~~~~~D~vv~a~G~~ 269 (455)
T 1ebd_A 212 QMAAIIKKRLKKKGVEVVTNALAKGAEEREDG-V-TVTYEANGETKTIDADYVLVTVGRR 269 (455)
T ss_dssp HHHHHHHHHHHHTTCEEEESEEEEEEEEETTE-E-EEEEEETTEEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCe-E-EEEEEeCCceeEEEcCEEEECcCCC
Confidence 45566777788899999999999999975333 4 35554 34678999999998764
No 144
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=91.97 E-value=0.24 Score=43.65 Aligned_cols=55 Identities=22% Similarity=0.325 Sum_probs=43.2
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 153 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 153 (354)
.+.+.+.+.+++.+.+++++++|++|..+++ .+ .|.+.+|+++.+|+||+|+...
T Consensus 66 ~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~-~~-~v~~~~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 66 DLVKGLVEQVAPFNPVYSLGERAETLEREGD-LF-KVTTSQGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp HHHHHHHHHHGGGCCEEEESCCEEEEEEETT-EE-EEEETTSCEEEEEEEEECCTTS
T ss_pred HHHHHHHHHHHHcCCEEEeCCEEEEEEECCC-EE-EEEECCCCEEEeCEEEECCCCC
Confidence 4566666666677899999999999998533 34 4777778889999999998864
No 145
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=91.85 E-value=0.31 Score=44.31 Aligned_cols=44 Identities=7% Similarity=0.028 Sum_probs=36.7
Q ss_pred cCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhh
Q 018523 109 LGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 154 (354)
Q Consensus 109 ~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 154 (354)
.|++|+++++|++|+.++++ + .|++.+|+++++|.||.|.....
T Consensus 110 ~~~~i~~~~~v~~i~~~~~~-v-~v~~~~g~~~~ad~vV~AdG~~S 153 (397)
T 2vou_A 110 GPERYHTSKCLVGLSQDSET-V-QMRFSDGTKAEANWVIGADGGAS 153 (397)
T ss_dssp CSTTEETTCCEEEEEECSSC-E-EEEETTSCEEEESEEEECCCTTC
T ss_pred CCcEEEcCCEEEEEEecCCE-E-EEEECCCCEEECCEEEECCCcch
Confidence 48999999999999986444 6 38888898999999999887743
No 146
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=91.66 E-value=0.16 Score=47.75 Aligned_cols=55 Identities=16% Similarity=0.123 Sum_probs=42.7
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcC----CeEEEcCEEEEccChh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN----GNVIDGDAYVFATPVD 153 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~----g~~~~ad~VI~a~p~~ 153 (354)
.+.+.+.+.+++.|++|+++++|++|..++++ + .|++.+ |+++.+|.||+++...
T Consensus 227 ~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~-~-~v~~~~~~~~g~~~~~D~vv~a~G~~ 285 (482)
T 1ojt_A 227 DLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDG-V-YVTFEGANAPKEPQRYDAVLVAAGRA 285 (482)
T ss_dssp HHHHHHHHHHGGGEEEEECSCEEEEEEEETTE-E-EEEEESSSCCSSCEEESCEEECCCEE
T ss_pred HHHHHHHHHHHhcCCEEEECCEEEEEEEcCCe-E-EEEEeccCCCceEEEcCEEEECcCCC
Confidence 34566677787889999999999999975333 3 477766 6778999999998763
No 147
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=91.63 E-value=0.45 Score=44.65 Aligned_cols=55 Identities=15% Similarity=0.158 Sum_probs=41.9
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcC---Ce--EEEcCEEEEccCh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN---GN--VIDGDAYVFATPV 152 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~---g~--~~~ad~VI~a~p~ 152 (354)
.+.+.+.+.+++.|++++++++|++|...+++.+ .|++.+ |+ ++.+|.||+++..
T Consensus 226 ~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~-~v~~~~~~~g~~~~~~~D~vi~a~G~ 285 (488)
T 3dgz_A 226 QMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQL-QVTWEDHASGKEDTGTFDTVLWAIGR 285 (488)
T ss_dssp HHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCE-EEEEEETTTTEEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcE-EEEEEeCCCCeeEEEECCEEEEcccC
Confidence 4566677778889999999999999987545544 355544 54 4789999999875
No 148
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=91.61 E-value=0.29 Score=45.38 Aligned_cols=53 Identities=21% Similarity=0.275 Sum_probs=41.5
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccCh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 152 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 152 (354)
.+.+.+.+.+++.|++|+++++|++|..+ +++..|.+ +|+++++|.||++++.
T Consensus 192 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~--~~v~~v~~-~~~~i~~d~vi~a~G~ 244 (447)
T 1nhp_A 192 EFTDVLTEEMEANNITIATGETVERYEGD--GRVQKVVT-DKNAYDADLVVVAVGV 244 (447)
T ss_dssp HHHHHHHHHHHTTTEEEEESCCEEEEECS--SBCCEEEE-SSCEEECSEEEECSCE
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEcc--CcEEEEEE-CCCEEECCEEEECcCC
Confidence 45567777788899999999999999863 33434665 5678999999999875
No 149
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=91.57 E-value=0.34 Score=45.19 Aligned_cols=55 Identities=16% Similarity=0.384 Sum_probs=42.2
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEc---CC--eEEEcCEEEEccChh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NG--NVIDGDAYVFATPVD 153 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~---~g--~~~~ad~VI~a~p~~ 153 (354)
.+.+.+.+.+++.|++|+++++|++|..++++ + .|++. +| +++.+|.||+++...
T Consensus 219 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~-~-~v~~~~~~~g~~~~~~~D~vv~a~G~~ 278 (470)
T 1dxl_A 219 EIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDG-V-KLTVEPSAGGEQTIIEADVVLVSAGRT 278 (470)
T ss_dssp HHHHHHHHHHHHSSCCEECSEEEEEEECSSSS-E-EEEEEESSSCCCEEEEESEEECCCCEE
T ss_pred HHHHHHHHHHHHcCCEEEeCCEEEEEEEcCCe-E-EEEEEecCCCcceEEECCEEEECCCCC
Confidence 45566777888899999999999999974333 4 35654 44 678999999998764
No 150
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=91.55 E-value=0.31 Score=46.09 Aligned_cols=56 Identities=20% Similarity=0.231 Sum_probs=41.5
Q ss_pred cccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCC----eEEEcCEEEEccCh
Q 018523 95 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG----NVIDGDAYVFATPV 152 (354)
Q Consensus 95 ~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g----~~~~ad~VI~a~p~ 152 (354)
...+.+.+.+.|++.|++|+++++|++|+. ++.+..+...|| +++.+|.||.|+..
T Consensus 271 ~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~--~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv 330 (502)
T 4g6h_A 271 EKKLSSYAQSHLENTSIKVHLRTAVAKVEE--KQLLAKTKHEDGKITEETIPYGTLIWATGN 330 (502)
T ss_dssp CHHHHHHHHHHHHHTTCEEETTEEEEEECS--SEEEEEEECTTSCEEEEEEECSEEEECCCE
T ss_pred CHHHHHHHHHHHHhcceeeecCceEEEEeC--CceEEEEEecCcccceeeeccCEEEEccCC
Confidence 355667777888899999999999999974 443333444565 36899999998753
No 151
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=91.43 E-value=0.37 Score=41.94 Aligned_cols=56 Identities=16% Similarity=0.185 Sum_probs=43.2
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCC--CCEEEEEEcCCeEEEcCEEEEccChh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDD--GTVKNFLLTNGNVIDGDAYVFATPVD 153 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~--g~v~~V~~~~g~~~~ad~VI~a~p~~ 153 (354)
.+.+.+.+.+++.|.+++++++|+.|..+.+ +.+ .|++.+|+++.+|+||+|+...
T Consensus 57 ~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~-~v~~~~g~~~~~~~lv~AtG~~ 114 (310)
T 1fl2_A 57 KLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLH-QIETASGAVLKARSIIVATGAK 114 (310)
T ss_dssp HHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCE-EEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceE-EEEECCCCEEEeCEEEECcCCC
Confidence 4566666777778999999999999986422 223 4788888889999999998764
No 152
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=91.35 E-value=0.37 Score=43.63 Aligned_cols=45 Identities=18% Similarity=0.290 Sum_probs=37.8
Q ss_pred cCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhh
Q 018523 109 LGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 154 (354)
Q Consensus 109 ~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 154 (354)
.+.+|+++++|++++..+++.| .|++.||++++||.||-|-....
T Consensus 122 ~~~~v~~~~~v~~~~~~~~~~v-~v~~~dG~~~~adlvVgADG~~S 166 (412)
T 4hb9_A 122 LANTIQWNKTFVRYEHIENGGI-KIFFADGSHENVDVLVGADGSNS 166 (412)
T ss_dssp CTTTEECSCCEEEEEECTTSCE-EEEETTSCEEEESEEEECCCTTC
T ss_pred ccceEEEEEEEEeeeEcCCCeE-EEEECCCCEEEeeEEEECCCCCc
Confidence 4678999999999998667767 48999999999999998876643
No 153
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=91.27 E-value=0.39 Score=45.13 Aligned_cols=54 Identities=17% Similarity=0.306 Sum_probs=41.7
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcC---C--eEEEcCEEEEccCh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN---G--NVIDGDAYVFATPV 152 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~---g--~~~~ad~VI~a~p~ 152 (354)
.+.+.+.+.+++.|++|+++++|++|..++++ + .|++.+ | +++.+|.||+++..
T Consensus 240 ~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~-~-~v~~~~~~~g~~~~i~~D~Vi~a~G~ 298 (491)
T 3urh_A 240 EVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDG-A-KVTFEPVKGGEATTLDAEVVLIATGR 298 (491)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEEETTE-E-EEEEEETTSCCCEEEEESEEEECCCC
T ss_pred HHHHHHHHHHHhCCCEEEECCeEEEEEEeCCE-E-EEEEEecCCCceEEEEcCEEEEeeCC
Confidence 45667777888899999999999999985433 4 355542 5 57899999999875
No 154
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=91.25 E-value=0.42 Score=45.63 Aligned_cols=55 Identities=9% Similarity=0.041 Sum_probs=45.5
Q ss_pred ccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccCh
Q 018523 96 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 152 (354)
Q Consensus 96 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 152 (354)
..+.+.+.+.+++.|.++++++.|+++... ++.+ .|.+.+++++.+|.|++++.-
T Consensus 263 ~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~-~~~~-~v~~~~~~~~~~D~vLvAvGR 317 (542)
T 4b1b_A 263 QQCAVKVKLYMEEQGVMFKNGILPKKLTKM-DDKI-LVEFSDKTSELYDTVLYAIGR 317 (542)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEE-TTEE-EEEETTSCEEEESEEEECSCE
T ss_pred hhHHHHHHHHHHhhcceeecceEEEEEEec-CCeE-EEEEcCCCeEEEEEEEEcccc
Confidence 446677888888999999999999999985 4445 478888888999999999865
No 155
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=91.23 E-value=0.44 Score=44.43 Aligned_cols=54 Identities=17% Similarity=0.178 Sum_probs=42.4
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 153 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 153 (354)
.+.+.+.+.+++.|++|+++++|++|..+ ++.+ .|++. +.++.+|.||+++...
T Consensus 217 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~~~-~v~~~-~~~i~aD~Vv~a~G~~ 270 (467)
T 1zk7_A 217 AIGEAVTAAFRAEGIEVLEHTQASQVAHM-DGEF-VLTTT-HGELRADKLLVATGRT 270 (467)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEEE-TTEE-EEEET-TEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEe-CCEE-EEEEC-CcEEEcCEEEECCCCC
Confidence 45667777888899999999999999874 3323 46665 5689999999998764
No 156
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=91.21 E-value=0.44 Score=46.51 Aligned_cols=57 Identities=14% Similarity=0.096 Sum_probs=44.2
Q ss_pred cchHHHHHHHHHc-CC-EEEecceeeEEEecCC--CCEEEEEE---cCCe--EEEcCEEEEccChh
Q 018523 97 RLCLPIVEHIQSL-GG-EVRLNSRVQKIELNDD--GTVKNFLL---TNGN--VIDGDAYVFATPVD 153 (354)
Q Consensus 97 ~l~~~l~~~l~~~-g~-~i~~~~~V~~I~~~~~--g~v~~V~~---~~g~--~~~ad~VI~a~p~~ 153 (354)
.+...+.+.+++. |+ +|+.+++|++|..+++ |+|++|.. .+|+ ++.|+.||+|+...
T Consensus 152 ~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~ 217 (643)
T 1jnr_A 152 SYKPIIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGA 217 (643)
T ss_dssp THHHHHHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCB
T ss_pred HHHHHHHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCcc
Confidence 5677787777777 99 9999999999998533 27877764 4564 68999999987653
No 157
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=91.17 E-value=7.3 Score=34.44 Aligned_cols=44 Identities=23% Similarity=0.305 Sum_probs=35.7
Q ss_pred ccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhh
Q 018523 96 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 154 (354)
Q Consensus 96 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 154 (354)
..+...|.+.+++.|++|+. ++|++|..+ . + +||.||.|+..+.
T Consensus 142 ~~~~~~l~~~~~~~G~~i~~-~~v~~l~~~----~---------~-~a~~VV~A~G~~s 185 (363)
T 1c0p_A 142 PKYCQYLARELQKLGATFER-RTVTSLEQA----F---------D-GADLVVNATGLGA 185 (363)
T ss_dssp HHHHHHHHHHHHHTTCEEEE-CCCSBGGGT----C---------S-SCSEEEECCGGGG
T ss_pred HHHHHHHHHHHHHCCCEEEE-EEcccHhhc----C---------c-CCCEEEECCCcch
Confidence 46788888888889999999 999988752 1 2 7899999988875
No 158
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=91.01 E-value=0.31 Score=46.61 Aligned_cols=57 Identities=16% Similarity=0.145 Sum_probs=43.4
Q ss_pred cchHHHHHHHHHcCC--EEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChh
Q 018523 97 RLCLPIVEHIQSLGG--EVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 153 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~--~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 153 (354)
.+.+.+.+.+++.|. .|+++++|+++..++++....|++.+|++++||.||+|+...
T Consensus 88 ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~ 146 (545)
T 3uox_A 88 EMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPL 146 (545)
T ss_dssp HHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSC
T ss_pred HHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCC
Confidence 455556666666675 899999999999864432335888899999999999998853
No 159
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=90.99 E-value=0.62 Score=43.64 Aligned_cols=55 Identities=15% Similarity=0.097 Sum_probs=42.8
Q ss_pred ccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChh
Q 018523 96 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 153 (354)
Q Consensus 96 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 153 (354)
..+.+.+.+.+++.|++|+++++|++|..+ +++..|.+ ++.++.+|.||++++..
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~v~~v~~-~~~~i~~D~vi~a~G~~ 281 (480)
T 3cgb_A 227 GDMAEYIYKEADKHHIEILTNENVKAFKGN--ERVEAVET-DKGTYKADLVLVSVGVK 281 (480)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEES--SBEEEEEE-TTEEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHHHcCcEEEcCCEEEEEEcC--CcEEEEEE-CCCEEEcCEEEECcCCC
Confidence 345677778888899999999999999873 44544666 45689999999998763
No 160
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=90.94 E-value=0.45 Score=44.03 Aligned_cols=51 Identities=18% Similarity=0.257 Sum_probs=43.4
Q ss_pred ccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccCh
Q 018523 96 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 152 (354)
Q Consensus 96 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 152 (354)
..+.+.+.+.+++.|++++++++|+++.. + .|++.+|+++.+|.||+++..
T Consensus 188 ~~~~~~~~~~l~~~gV~i~~~~~v~~~~~--~----~v~~~~g~~~~~D~vl~a~G~ 238 (437)
T 4eqs_A 188 ADMNQPILDELDKREIPYRLNEEINAING--N----EITFKSGKVEHYDMIIEGVGT 238 (437)
T ss_dssp GGGGHHHHHHHHHTTCCEEESCCEEEEET--T----EEEETTSCEEECSEEEECCCE
T ss_pred chhHHHHHHHhhccceEEEeccEEEEecC--C----eeeecCCeEEeeeeEEEEece
Confidence 56778888899999999999999998863 2 367888999999999999865
No 161
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=90.89 E-value=0.58 Score=40.61 Aligned_cols=52 Identities=12% Similarity=0.205 Sum_probs=38.4
Q ss_pred HHHHHHHHH-cCCEEEecceeeEEEecCCCCEEEEEEcC---Ce--EEEcCEEEEccCh
Q 018523 100 LPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTN---GN--VIDGDAYVFATPV 152 (354)
Q Consensus 100 ~~l~~~l~~-~g~~i~~~~~V~~I~~~~~g~v~~V~~~~---g~--~~~ad~VI~a~p~ 152 (354)
..+.+.+.+ .|++|+++++|++|..+ ++++.+|++.+ |+ ++.+|.||++++.
T Consensus 183 ~~~~~~l~~~~gv~v~~~~~v~~i~~~-~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 240 (310)
T 1fl2_A 183 QVLQDKLRSLKNVDIILNAQTTEVKGD-GSKVVGLEYRDRVSGDIHNIELAGIFVQIGL 240 (310)
T ss_dssp HHHHHHHHTCTTEEEESSEEEEEEEES-SSSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred HHHHHHHhhCCCeEEecCCceEEEEcC-CCcEEEEEEEECCCCcEEEEEcCEEEEeeCC
Confidence 445666666 69999999999999974 45565676653 53 6789999998653
No 162
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=90.65 E-value=0.6 Score=40.10 Aligned_cols=60 Identities=13% Similarity=0.164 Sum_probs=46.6
Q ss_pred eeeeecCCCcccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccCh
Q 018523 86 KMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 152 (354)
Q Consensus 86 ~~~~~~Gg~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 152 (354)
...++..+. ..+.+.+.+.+++.|++++. ++|++|.. ++ +|++.+|+++.+|.||++++.
T Consensus 165 ~v~~v~~~~-~~~~~~~~~~l~~~gv~i~~-~~v~~i~~--~~---~v~~~~g~~~~~D~vi~a~G~ 224 (297)
T 3fbs_A 165 ETTFFTNGI-VEPDADQHALLAARGVRVET-TRIREIAG--HA---DVVLADGRSIALAGLFTQPKL 224 (297)
T ss_dssp EEEEECTTT-CCCCHHHHHHHHHTTCEEEC-SCEEEEET--TE---EEEETTSCEEEESEEEECCEE
T ss_pred cEEEEECCC-CCCCHHHHHHHHHCCcEEEc-ceeeeeec--CC---eEEeCCCCEEEEEEEEEccCc
Confidence 556664442 46788888889999999996 99999985 22 478888989999999998653
No 163
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=90.39 E-value=0.38 Score=46.66 Aligned_cols=55 Identities=15% Similarity=0.196 Sum_probs=43.4
Q ss_pred cchHHHHHHHHHc-CCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChh
Q 018523 97 RLCLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 153 (354)
Q Consensus 97 ~l~~~l~~~l~~~-g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 153 (354)
.+...+.+.+++. |++|. +.+|+.|..+ +++|.+|.+.+|++++||.||+|+...
T Consensus 118 ~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d-~g~V~GV~t~~G~~i~Ad~VVLATG~~ 173 (641)
T 3cp8_A 118 QYSLYMRRIVEHEPNIDLL-QDTVIGVSAN-SGKFSSVTVRSGRAIQAKAAILACGTF 173 (641)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEE-TTEEEEEEETTSCEEEEEEEEECCTTC
T ss_pred HHHHHHHHHHHhCCCCEEE-eeEEEEEEec-CCEEEEEEECCCcEEEeCEEEECcCCC
Confidence 4567777777764 88984 6699999874 556777888889899999999998764
No 164
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=90.23 E-value=0.5 Score=41.14 Aligned_cols=54 Identities=19% Similarity=0.173 Sum_probs=42.0
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 153 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 153 (354)
.+.+.+.+.+++.|.++++ ++|++|..+ ++.+ .|.+.+|+++.+|+||+|+...
T Consensus 71 ~~~~~~~~~~~~~~v~~~~-~~v~~i~~~-~~~~-~v~~~~g~~~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 71 DMIKVFNKHIEKYEVPVLL-DIVEKIENR-GDEF-VVKTKRKGEFKADSVILGIGVK 124 (323)
T ss_dssp HHHHHHHHHHHTTTCCEEE-SCEEEEEEC---CE-EEEESSSCEEEEEEEEECCCCE
T ss_pred HHHHHHHHHHHHcCCEEEE-EEEEEEEec-CCEE-EEEECCCCEEEcCEEEECcCCC
Confidence 4566666777778999999 999999985 4435 4788888899999999988765
No 165
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=90.22 E-value=0.29 Score=46.20 Aligned_cols=59 Identities=15% Similarity=0.138 Sum_probs=42.3
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecC-CCCEEEEEE--c-CC--eEEEcCEEEEccChhhH
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELND-DGTVKNFLL--T-NG--NVIDGDAYVFATPVDIL 155 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~-~g~v~~V~~--~-~g--~~~~ad~VI~a~p~~~l 155 (354)
.+.+.|.+.+++.|++|+++++|++|..++ ++...+|++ . +| .++++|.||.|......
T Consensus 167 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~ 231 (497)
T 2bry_A 167 QLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFV 231 (497)
T ss_dssp HHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcc
Confidence 345566777777899999999999998742 222224666 3 55 47899999998877543
No 166
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=90.08 E-value=0.27 Score=44.73 Aligned_cols=48 Identities=10% Similarity=0.072 Sum_probs=37.6
Q ss_pred CCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhh-HhhhC
Q 018523 110 GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI-LKLQL 159 (354)
Q Consensus 110 g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~-l~~ll 159 (354)
+++|+++++|++|+.++++ + .|++.+|++++||.||.|..... +++.+
T Consensus 140 ~~~i~~~~~v~~i~~~~~~-v-~v~~~~g~~~~ad~vV~AdG~~S~vR~~l 188 (398)
T 2xdo_A 140 NDTVIWDRKLVMLEPGKKK-W-TLTFENKPSETADLVILANGGMSKVRKFV 188 (398)
T ss_dssp TTSEEESCCEEEEEECSSS-E-EEEETTSCCEEESEEEECSCTTCSCCTTT
T ss_pred CCEEEECCEEEEEEECCCE-E-EEEECCCcEEecCEEEECCCcchhHHhhc
Confidence 4789999999999986444 6 48888888899999999887744 34444
No 167
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=90.08 E-value=0.74 Score=40.02 Aligned_cols=50 Identities=24% Similarity=0.290 Sum_probs=37.2
Q ss_pred HHHHHHHH-cCCEEEecceeeEEEecCCCCEEEEEEcC---Ce--EEEcCEEEEccCh
Q 018523 101 PIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTN---GN--VIDGDAYVFATPV 152 (354)
Q Consensus 101 ~l~~~l~~-~g~~i~~~~~V~~I~~~~~g~v~~V~~~~---g~--~~~ad~VI~a~p~ 152 (354)
.+.+.+.+ .|++++++++|++|..+ +++.+|++.+ |+ ++.+|.||++++.
T Consensus 194 ~~~~~~~~~~gv~~~~~~~v~~i~~~--~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 249 (323)
T 3f8d_A 194 IYVETVKKKPNVEFVLNSVVKEIKGD--KVVKQVVVENLKTGEIKELNVNGVFIEIGF 249 (323)
T ss_dssp HHHHHHHTCTTEEEECSEEEEEEEES--SSEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred HHHHHHHhCCCcEEEeCCEEEEEecc--CceeEEEEEECCCCceEEEEcCEEEEEECC
Confidence 44454554 49999999999999974 3455677765 65 7899999998764
No 168
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=89.93 E-value=0.6 Score=44.49 Aligned_cols=57 Identities=9% Similarity=0.080 Sum_probs=41.1
Q ss_pred cchHHHHHHHHHcC--CEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChh
Q 018523 97 RLCLPIVEHIQSLG--GEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 153 (354)
Q Consensus 97 ~l~~~l~~~l~~~g--~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 153 (354)
.+.+.+....++.+ .+|+++++|+++..++++....|++.+|++++||.||+|+...
T Consensus 95 ~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~ 153 (542)
T 1w4x_A 95 EILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQL 153 (542)
T ss_dssp HHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSC
T ss_pred HHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCC
Confidence 34444444445544 6899999999999865432225888888889999999998854
No 169
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=89.84 E-value=0.5 Score=43.52 Aligned_cols=50 Identities=14% Similarity=0.089 Sum_probs=38.4
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcC----CeEEEcCEEEEccCh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN----GNVIDGDAYVFATPV 152 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~----g~~~~ad~VI~a~p~ 152 (354)
.+.+.+.+.+++.|++++++++|++|+. ++ + ++.+ |+++.+|.||++++.
T Consensus 201 ~~~~~l~~~l~~~GV~i~~~~~v~~v~~--~~-v---~~~~~~~~g~~i~~D~vv~a~G~ 254 (430)
T 3h28_A 201 ASKRLVEDLFAERNIDWIANVAVKAIEP--DK-V---IYEDLNGNTHEVPAKFTMFMPSF 254 (430)
T ss_dssp THHHHHHHHHHHTTCEEECSCEEEEECS--SE-E---EEECTTSCEEEEECSEEEEECEE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEeC--Ce-E---EEEecCCCceEEeeeEEEECCCC
Confidence 3566777888899999999999999974 32 3 3333 678999999998653
No 170
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=89.67 E-value=0.35 Score=44.86 Aligned_cols=58 Identities=17% Similarity=-0.038 Sum_probs=41.0
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcC---Ce---EEEcCEEEEccChhhHh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN---GN---VIDGDAYVFATPVDILK 156 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~---g~---~~~ad~VI~a~p~~~l~ 156 (354)
.+.+.+.+.+++.+..|+++++|++|..++++ + .|++.+ |+ ++.||+||+|+......
T Consensus 116 ~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~-~-~V~~~~~~~G~~~~~~~~d~VVvAtG~~s~p 179 (447)
T 2gv8_A 116 TIQEYQRIYAQPLLPFIKLATDVLDIEKKDGS-W-VVTYKGTKAGSPISKDIFDAVSICNGHYEVP 179 (447)
T ss_dssp HHHHHHHHHHGGGGGGEECSEEEEEEEEETTE-E-EEEEEESSTTCCEEEEEESEEEECCCSSSSB
T ss_pred HHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCe-E-EEEEeecCCCCeeEEEEeCEEEECCCCCCCC
Confidence 34455555555567789999999999875333 3 366654 66 78999999998875433
No 171
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=89.58 E-value=0.54 Score=41.15 Aligned_cols=51 Identities=12% Similarity=0.113 Sum_probs=38.2
Q ss_pred HHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcC-----CeEEEcCEEEEccCh
Q 018523 100 LPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN-----GNVIDGDAYVFATPV 152 (354)
Q Consensus 100 ~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~-----g~~~~ad~VI~a~p~ 152 (354)
+...+.+++.|++++++++|++|..+ ++ +.+|++.+ ++++.+|.||++++.
T Consensus 193 ~~~~~~l~~~gv~~~~~~~v~~i~~~-~~-~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 248 (332)
T 3lzw_A 193 EHSVENLHASKVNVLTPFVPAELIGE-DK-IEQLVLEEVKGDRKEILEIDDLIVNYGF 248 (332)
T ss_dssp HHHHHHHHHSSCEEETTEEEEEEECS-SS-CCEEEEEETTSCCEEEEECSEEEECCCE
T ss_pred HHHHHHHhcCCeEEEeCceeeEEecC-Cc-eEEEEEEecCCCceEEEECCEEEEeecc
Confidence 44456678899999999999999974 33 33566654 356899999998764
No 172
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=89.42 E-value=12 Score=36.49 Aligned_cols=36 Identities=14% Similarity=0.128 Sum_probs=27.0
Q ss_pred CceEEeeccccCCCC---CchhHHHHHHHHHHHHHHHHh
Q 018523 301 EGFYLAGDYTKQKYL---ASMEGAVLSGKLCAQAIVQDY 336 (354)
Q Consensus 301 ~~L~~aG~~~~~~~~---~~~~gAi~sG~~aa~~il~~~ 336 (354)
++++++||..+...| .|++-+++.+...|..+...+
T Consensus 351 gRV~L~GDAAH~~~P~~GqG~N~gi~DA~nLawkLa~vl 389 (665)
T 1pn0_A 351 ERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVL 389 (665)
T ss_dssp TTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECccccCCCcccCCcchhHHHHHHHHHHHHHHH
Confidence 689999998875544 478888888877777665543
No 173
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=89.37 E-value=0.54 Score=46.03 Aligned_cols=57 Identities=12% Similarity=0.130 Sum_probs=44.8
Q ss_pred ccchHHHHHHHHHc--CCEEEecceeeEEEecCC--CCEEEEEE---cCCe--EEEcCEEEEccCh
Q 018523 96 ERLCLPIVEHIQSL--GGEVRLNSRVQKIELNDD--GTVKNFLL---TNGN--VIDGDAYVFATPV 152 (354)
Q Consensus 96 ~~l~~~l~~~l~~~--g~~i~~~~~V~~I~~~~~--g~v~~V~~---~~g~--~~~ad~VI~a~p~ 152 (354)
..+...|.+.+++. |++|+.++.|++|..+++ |+|.+|.. .+|+ .+.|++||+|+.-
T Consensus 166 ~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG 231 (662)
T 3gyx_A 166 ESYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGG 231 (662)
T ss_dssp TSHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCc
Confidence 36778888888877 999999999999998544 37878765 3453 5899999998765
No 174
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=89.29 E-value=0.15 Score=46.47 Aligned_cols=44 Identities=7% Similarity=0.055 Sum_probs=36.1
Q ss_pred HHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccCh
Q 018523 107 QSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 152 (354)
Q Consensus 107 ~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 152 (354)
++.|.+++++++|+.++.+.++. .|++.+|+++.+|.||++.|.
T Consensus 213 ~~~gi~v~~~~~v~~v~~~~~~~--~v~~~~g~~i~~D~vi~~~g~ 256 (401)
T 3vrd_B 213 ENALIEWHPGPDAAVVKTDTEAM--TVETSFGETFKAAVINLIPPQ 256 (401)
T ss_dssp TTCSEEEECTTTTCEEEEETTTT--EEEETTSCEEECSEEEECCCE
T ss_pred HhcCcEEEeCceEEEEEecccce--EEEcCCCcEEEeeEEEEecCc
Confidence 34689999999999999864443 488889999999999998664
No 175
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=89.23 E-value=0.25 Score=48.66 Aligned_cols=51 Identities=18% Similarity=0.088 Sum_probs=39.0
Q ss_pred chHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEE---cCCeEEEcCEEEEccCh
Q 018523 98 LCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGNVIDGDAYVFATPV 152 (354)
Q Consensus 98 l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~---~~g~~~~ad~VI~a~p~ 152 (354)
+...+.+.+++.|++|+++++|++|.. ++ + .++. .+++++.+|.||+++..
T Consensus 569 ~~~~l~~~l~~~GV~i~~~~~V~~i~~--~~-~-~v~~~~~~~~~~i~aD~VV~A~G~ 622 (690)
T 3k30_A 569 EVNRIQRRLIENGVARVTDHAVVAVGA--GG-V-TVRDTYASIERELECDAVVMVTAR 622 (690)
T ss_dssp CHHHHHHHHHHTTCEEEESEEEEEEET--TE-E-EEEETTTCCEEEEECSEEEEESCE
T ss_pred hHHHHHHHHHHCCCEEEcCcEEEEEEC--Ce-E-EEEEccCCeEEEEECCEEEECCCC
Confidence 456777888899999999999999985 33 3 2332 24567899999999876
No 176
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=89.09 E-value=0.78 Score=42.77 Aligned_cols=57 Identities=23% Similarity=0.231 Sum_probs=41.3
Q ss_pred cchHHHHHHHHHcCCE--EEecceeeEEEecCCC-CEEEEEEcC---C--eEEEcCEEEEccChhh
Q 018523 97 RLCLPIVEHIQSLGGE--VRLNSRVQKIELNDDG-TVKNFLLTN---G--NVIDGDAYVFATPVDI 154 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~--i~~~~~V~~I~~~~~g-~v~~V~~~~---g--~~~~ad~VI~a~p~~~ 154 (354)
.+.+.+.+.+++.|.+ |+++++|++|..++++ .+ .|++.+ | .++.||+||+|+....
T Consensus 102 ~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~-~V~~~~~~~g~~~~~~~d~VVvAtG~~s 166 (464)
T 2xve_A 102 VLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTF-TVTVQDHTTDTIYSEEFDYVVCCTGHFS 166 (464)
T ss_dssp HHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEE-EEEEEETTTTEEEEEEESEEEECCCSSS
T ss_pred HHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcE-EEEEEEcCCCceEEEEcCEEEECCCCCC
Confidence 4556666666677887 9999999999985442 23 366644 4 5689999999998543
No 177
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=89.04 E-value=0.5 Score=44.23 Aligned_cols=57 Identities=25% Similarity=0.254 Sum_probs=43.2
Q ss_pred ccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcC-CeEEEcCEEEEccChhh
Q 018523 96 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN-GNVIDGDAYVFATPVDI 154 (354)
Q Consensus 96 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~-g~~~~ad~VI~a~p~~~ 154 (354)
..+.+.|.+.+++.|++|+.+++| +|..+ ++++.+|.+.+ +.++.+|.||+|+....
T Consensus 119 ~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~-~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~ 176 (472)
T 2e5v_A 119 REIFNFLLKLAREEGIPIIEDRLV-EIRVK-DGKVTGFVTEKRGLVEDVDKLVLATGGYS 176 (472)
T ss_dssp HHHHHHHHHHHHHTTCCEECCCEE-EEEEE-TTEEEEEEETTTEEECCCSEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEE-EEEEe-CCEEEEEEEEeCCCeEEeeeEEECCCCCc
Confidence 357788888887789999999999 99874 55676676642 33578999999876643
No 178
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=89.01 E-value=0.64 Score=40.37 Aligned_cols=53 Identities=19% Similarity=0.301 Sum_probs=41.2
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccCh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 152 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 152 (354)
.+.+.+.+.+++.|.++++ ++|++|..+++ .+ .|++.+|+++++|.||+|+..
T Consensus 60 ~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~~-~~-~v~~~~g~~~~~~~vv~AtG~ 112 (311)
T 2q0l_A 60 DFMQPWQEQCFRFGLKHEM-TAVQRVSKKDS-HF-VILAEDGKTFEAKSVIIATGG 112 (311)
T ss_dssp HHHHHHHHHHHTTSCEEEC-SCEEEEEEETT-EE-EEEETTSCEEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHcCCEEEE-EEEEEEEEcCC-EE-EEEEcCCCEEECCEEEECCCC
Confidence 4566666667778999998 89999998533 34 377778888999999999885
No 179
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=88.96 E-value=1.2 Score=42.38 Aligned_cols=41 Identities=29% Similarity=0.413 Sum_probs=34.6
Q ss_pred CCC-CCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHHHhhh
Q 018523 296 QRS-PVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVL 338 (354)
Q Consensus 296 ~~~-~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~~~~~ 338 (354)
..+ .++|||.|||..... +++..|..+|.++|+.|++.+..
T Consensus 503 ~~~~~~~gly~~GegaG~a--~gi~~Aa~~G~~~a~~i~~~~~~ 544 (549)
T 3nlc_A 503 FQSVNLKGFYPAGEGAGYA--GGILSAGIDGIKVAEAVARDIVA 544 (549)
T ss_dssp TSCTTCBTEEECHHHHTSC--CSHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceECCcCCEEEccccCChh--hHHHHHHHHHHHHHHHHHHHhhh
Confidence 344 589999999987644 79999999999999999998853
No 180
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=88.93 E-value=0.57 Score=40.83 Aligned_cols=45 Identities=22% Similarity=0.262 Sum_probs=35.9
Q ss_pred CCCCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHHHhhhH
Q 018523 294 PLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLL 339 (354)
Q Consensus 294 ~~~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~~~~~~ 339 (354)
+.++|..+|||.+||-+..++ ..+..|+..|+.||..|.+.+..+
T Consensus 264 ~~~~Ts~pgIyA~GDv~~~~~-~~~~~A~~~G~~AA~~i~~~L~~l 308 (312)
T 4gcm_A 264 DDMTTSVPGIFAAGDVRDKGL-RQIVTATGDGSIAAQSAAEYIEHL 308 (312)
T ss_dssp TTSBCSSTTEEECSTTBSCSC-CSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCccCCCCEEEEeecCCCcc-hHHHHHHHHHHHHHHHHHHHHHhh
Confidence 346778899999999876432 367889999999999998877654
No 181
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=88.81 E-value=1.2 Score=38.96 Aligned_cols=51 Identities=12% Similarity=0.050 Sum_probs=37.7
Q ss_pred HHHHHHHHH-cCCEEEecceeeEEEecCCCCEEEEEEc---CCe--EEEcCEEEEccCh
Q 018523 100 LPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLT---NGN--VIDGDAYVFATPV 152 (354)
Q Consensus 100 ~~l~~~l~~-~g~~i~~~~~V~~I~~~~~g~v~~V~~~---~g~--~~~ad~VI~a~p~ 152 (354)
..+.+.+.+ .|++|+++++|++|..+ +++.+|++. +|+ ++.+|.||++++.
T Consensus 191 ~~~~~~l~~~~gv~i~~~~~v~~i~~~--~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 247 (325)
T 2q7v_A 191 KVAQARAFANPKMKFIWDTAVEEIQGA--DSVSGVKLRNLKTGEVSELATDGVFIFIGH 247 (325)
T ss_dssp HHHHHHHHTCTTEEEECSEEEEEEEES--SSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred hHHHHHHHhcCCceEecCCceEEEccC--CcEEEEEEEECCCCcEEEEEcCEEEEccCC
Confidence 445555554 59999999999999973 445567765 564 6899999998754
No 182
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=88.80 E-value=1 Score=42.35 Aligned_cols=54 Identities=11% Similarity=-0.033 Sum_probs=40.4
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEc--CC--eEEEcCEEEEccChh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NG--NVIDGDAYVFATPVD 153 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~--~g--~~~~ad~VI~a~p~~ 153 (354)
.+.+.+.+.+++. ++|+++++|++|..+ ++.+. |++. +| +++.+|.||+++...
T Consensus 216 ~~~~~l~~~l~~~-V~i~~~~~v~~i~~~-~~~v~-v~~~~~~G~~~~i~~D~Vi~a~G~~ 273 (492)
T 3ic9_A 216 EMKRYAEKTFNEE-FYFDAKARVISTIEK-EDAVE-VIYFDKSGQKTTESFQYVLAATGRK 273 (492)
T ss_dssp HHHHHHHHHHHTT-SEEETTCEEEEEEEC-SSSEE-EEEECTTCCEEEEEESEEEECSCCE
T ss_pred HHHHHHHHHHhhC-cEEEECCEEEEEEEc-CCEEE-EEEEeCCCceEEEECCEEEEeeCCc
Confidence 3455566666666 999999999999985 44453 6664 67 678999999998763
No 183
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=88.76 E-value=0.92 Score=39.32 Aligned_cols=52 Identities=12% Similarity=0.043 Sum_probs=37.9
Q ss_pred HHHHHHHHH-cCCEEEecceeeEEEecCCCCEEEEEEc---CCe--EEEcCEEEEccCh
Q 018523 100 LPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLT---NGN--VIDGDAYVFATPV 152 (354)
Q Consensus 100 ~~l~~~l~~-~g~~i~~~~~V~~I~~~~~g~v~~V~~~---~g~--~~~ad~VI~a~p~ 152 (354)
..+.+.+.+ .|++++++++|++|..+ ++++.+|++. +|+ ++.+|.||++++.
T Consensus 182 ~~~~~~l~~~~gv~v~~~~~v~~i~~~-~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 239 (311)
T 2q0l_A 182 PITLEHAKNNDKIEFLTPYVVEEIKGD-ASGVSSLSIKNTATNEKRELVVPGFFIFVGY 239 (311)
T ss_dssp HHHHHHHHTCTTEEEETTEEEEEEEEE-TTEEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred HHHHHHHhhCCCeEEEeCCEEEEEECC-CCcEeEEEEEecCCCceEEEecCEEEEEecC
Confidence 445566654 69999999999999874 3445456665 564 6899999998653
No 184
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=88.54 E-value=0.27 Score=43.38 Aligned_cols=42 Identities=21% Similarity=0.306 Sum_probs=30.8
Q ss_pred CCCCCCceEEeecccc---CCC--CCchhHHHHHHHHHHHHHHHHhh
Q 018523 296 QRSPVEGFYLAGDYTK---QKY--LASMEGAVLSGKLCAQAIVQDYV 337 (354)
Q Consensus 296 ~~~~~~~L~~aG~~~~---~~~--~~~~~gAi~sG~~aa~~il~~~~ 337 (354)
.++.++|||.|||... +.+ ...+-+++.||++||+.|++.|.
T Consensus 279 ~~t~vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~~~la 325 (326)
T 3fpz_A 279 AYAGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp ECTTSBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred eEECCCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHHHHhc
Confidence 3566799999999653 111 02455678899999999999874
No 185
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=88.36 E-value=0.8 Score=43.41 Aligned_cols=56 Identities=16% Similarity=0.222 Sum_probs=43.5
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecC--CCCEEEEEEcCCeEEEcCEEEEccChh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELND--DGTVKNFLLTNGNVIDGDAYVFATPVD 153 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~--~g~v~~V~~~~g~~~~ad~VI~a~p~~ 153 (354)
.+.+.+.+.+++.|++++.+++|++|..+. ++.. .|++.+|+++++|+||+|+...
T Consensus 268 ~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~-~V~~~~g~~~~~d~vVlAtG~~ 325 (521)
T 1hyu_A 268 KLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLH-QIETASGAVLKARSIIIATGAK 325 (521)
T ss_dssp HHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCE-EEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceE-EEEECCCCEEEcCEEEECCCCC
Confidence 455667777777899999999999998632 2234 4788888899999999998863
No 186
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=88.11 E-value=0.9 Score=41.38 Aligned_cols=59 Identities=24% Similarity=0.383 Sum_probs=42.7
Q ss_pred cchHHHHHHHHH-cC-CEEEecceeeEEEecCCCCEEEEEEcC---C--eEEEcCEEEEccChh-hHhhh
Q 018523 97 RLCLPIVEHIQS-LG-GEVRLNSRVQKIELNDDGTVKNFLLTN---G--NVIDGDAYVFATPVD-ILKLQ 158 (354)
Q Consensus 97 ~l~~~l~~~l~~-~g-~~i~~~~~V~~I~~~~~g~v~~V~~~~---g--~~~~ad~VI~a~p~~-~l~~l 158 (354)
.|.+.|.+.+++ .| .+|+++++|++|.. +++ ++ |++.+ | .+++||.||.|.... .+++.
T Consensus 108 ~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~-v~-v~~~~~~~g~~~~~~ad~vV~AdG~~S~vR~~ 174 (410)
T 3c96_A 108 ELQMILLAAVRERLGQQAVRTGLGVERIEE-RDG-RV-LIGARDGHGKPQALGADVLVGADGIHSAVRAH 174 (410)
T ss_dssp HHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETT-EE-EEEEEETTSCEEEEEESEEEECCCTTCHHHHH
T ss_pred HHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCc-cE-EEEecCCCCCceEEecCEEEECCCccchhHHH
Confidence 456677777765 36 48999999999998 555 53 66654 7 578999999988774 34443
No 187
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=88.06 E-value=1.4 Score=38.97 Aligned_cols=39 Identities=13% Similarity=0.187 Sum_probs=28.4
Q ss_pred cchHHHHHHHHHc-CCEEEecceeeEEEecC--C-C--CEEEEEE
Q 018523 97 RLCLPIVEHIQSL-GGEVRLNSRVQKIELND--D-G--TVKNFLL 135 (354)
Q Consensus 97 ~l~~~l~~~l~~~-g~~i~~~~~V~~I~~~~--~-g--~v~~V~~ 135 (354)
.+...|.+.+.+. |++|+.+++|++|..++ + + +|.+|.+
T Consensus 147 ~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv 191 (326)
T 2gjc_A 147 LFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVT 191 (326)
T ss_dssp HHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEE
T ss_pred HHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEe
Confidence 3456666666664 89999999999999853 3 4 7878876
No 188
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=87.92 E-value=0.66 Score=41.78 Aligned_cols=49 Identities=22% Similarity=0.307 Sum_probs=39.5
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccCh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 152 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 152 (354)
.+.+.+.+.+++.|++++++++|++|.. + +|++.+|+ +.+|.||+++..
T Consensus 184 ~~~~~l~~~l~~~gV~i~~~~~v~~i~~--~----~v~~~~g~-i~~D~vi~a~G~ 232 (367)
T 1xhc_A 184 ELSNMIKDMLEETGVKFFLNSELLEANE--E----GVLTNSGF-IEGKVKICAIGI 232 (367)
T ss_dssp HHHHHHHHHHHHTTEEEECSCCEEEECS--S----EEEETTEE-EECSCEEEECCE
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEEe--e----EEEECCCE-EEcCEEEECcCC
Confidence 3456677788889999999999999972 2 36777887 999999998765
No 189
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=87.92 E-value=0.59 Score=43.47 Aligned_cols=52 Identities=21% Similarity=0.234 Sum_probs=40.1
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCC--eEEEcCEEEEccCh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG--NVIDGDAYVFATPV 152 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g--~~~~ad~VI~a~p~ 152 (354)
.+.+.+.+.+++.|++++++++|++|.. ++ + .|+..+| +++.+|.||+++..
T Consensus 213 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~--~~-v-~v~~~~G~~~~i~~D~vv~a~G~ 266 (458)
T 1lvl_A 213 ELTAPVAESLKKLGIALHLGHSVEGYEN--GC-L-LANDGKGGQLRLEADRVLVAVGR 266 (458)
T ss_dssp HHHHHHHHHHHHHTCEEETTCEEEEEET--TE-E-EEECSSSCCCEECCSCEEECCCE
T ss_pred HHHHHHHHHHHHCCCEEEECCEEEEEEe--CC-E-EEEECCCceEEEECCEEEECcCC
Confidence 3456667778888999999999999985 33 4 3554456 57899999999876
No 190
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=87.86 E-value=0.83 Score=40.09 Aligned_cols=53 Identities=15% Similarity=0.261 Sum_probs=41.5
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 153 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 153 (354)
.+.+.+.+.+++.|.++++++ |++|..+++ .+ .|++ +|+++++|.||+|+...
T Consensus 71 ~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~~-~~-~v~~-~~~~~~~~~vv~A~G~~ 123 (333)
T 1vdc_A 71 ELTDKFRKQSERFGTTIFTET-VTKVDFSSK-PF-KLFT-DSKAILADAVILAIGAV 123 (333)
T ss_dssp HHHHHHHHHHHHTTCEEECCC-CCEEECSSS-SE-EEEC-SSEEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHCCCEEEEeE-EEEEEEcCC-EE-EEEE-CCcEEEcCEEEECCCCC
Confidence 566677777778899999997 999987533 34 3666 77889999999998874
No 191
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=87.33 E-value=0.62 Score=43.25 Aligned_cols=55 Identities=18% Similarity=0.086 Sum_probs=37.9
Q ss_pred chHHHHHHHHHcCCEEEecceeeEEEecC-CCCE--EEEEEcCCe----EEEcCEEEEccCh
Q 018523 98 LCLPIVEHIQSLGGEVRLNSRVQKIELND-DGTV--KNFLLTNGN----VIDGDAYVFATPV 152 (354)
Q Consensus 98 l~~~l~~~l~~~g~~i~~~~~V~~I~~~~-~g~v--~~V~~~~g~----~~~ad~VI~a~p~ 152 (354)
+.+.+....++.|.+|+++++|++|..++ ++.. ..|++.+|+ ++.||+||+|+..
T Consensus 129 ~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~ 190 (463)
T 3s5w_A 129 FNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGG 190 (463)
T ss_dssp HHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCC
T ss_pred HHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCC
Confidence 33444444445688999999999998742 1222 146666664 7899999998875
No 192
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=87.26 E-value=1.4 Score=38.56 Aligned_cols=55 Identities=16% Similarity=0.217 Sum_probs=41.4
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEec--CCCCEEEEEEcCCeEEEcCEEEEccChh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELN--DDGTVKNFLLTNGNVIDGDAYVFATPVD 153 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~--~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 153 (354)
.+.+.+.+.+++.|.+++. ++|++|..+ +++.+ .|.+.+|+++.+|+||+|+...
T Consensus 66 ~~~~~l~~~~~~~gv~~~~-~~v~~i~~~~~~~~~~-~v~~~~g~~~~~~~vv~AtG~~ 122 (325)
T 2q7v_A 66 ELAQRMHQQAEKFGAKVEM-DEVQGVQHDATSHPYP-FTVRGYNGEYRAKAVILATGAD 122 (325)
T ss_dssp HHHHHHHHHHHHTTCEEEE-CCEEEEEECTTSSSCC-EEEEESSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHcCCEEEe-eeEEEEEeccCCCceE-EEEECCCCEEEeCEEEECcCCC
Confidence 4566667777778999988 689999875 23213 3667788899999999998763
No 193
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=87.10 E-value=1.5 Score=39.04 Aligned_cols=56 Identities=9% Similarity=0.144 Sum_probs=40.8
Q ss_pred chHHHHHHHHH-cCCEEEecceeeEEEecCC----------------C--CEEEEEEc--------------CCeEEEcC
Q 018523 98 LCLPIVEHIQS-LGGEVRLNSRVQKIELNDD----------------G--TVKNFLLT--------------NGNVIDGD 144 (354)
Q Consensus 98 l~~~l~~~l~~-~g~~i~~~~~V~~I~~~~~----------------g--~v~~V~~~--------------~g~~~~ad 144 (354)
+.+.|.+.+.+ .|++|+.+++|++|..+++ + +|.+|.+. +..+++|+
T Consensus 162 ~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak 241 (344)
T 3jsk_A 162 FTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAP 241 (344)
T ss_dssp HHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECS
T ss_pred HHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEEcC
Confidence 44667776666 4899999999999987542 3 67677652 22468999
Q ss_pred EEEEccChh
Q 018523 145 AYVFATPVD 153 (354)
Q Consensus 145 ~VI~a~p~~ 153 (354)
.||.|+...
T Consensus 242 ~VV~ATG~~ 250 (344)
T 3jsk_A 242 VIISTTGHD 250 (344)
T ss_dssp EEEECCCSS
T ss_pred EEEECCCCC
Confidence 999987654
No 194
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=86.79 E-value=0.7 Score=44.13 Aligned_cols=51 Identities=10% Similarity=0.060 Sum_probs=38.4
Q ss_pred HcCCEEEecceeeEEEecCCCCEEEEEEcC---Ce--EEEcC-EEEEccChhhHhhh
Q 018523 108 SLGGEVRLNSRVQKIELNDDGTVKNFLLTN---GN--VIDGD-AYVFATPVDILKLQ 158 (354)
Q Consensus 108 ~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~---g~--~~~ad-~VI~a~p~~~l~~l 158 (354)
+.|.+|+++++|++|..++++++++|++.+ |+ ++.|+ .||+++.......|
T Consensus 221 ~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~sp~l 277 (546)
T 2jbv_A 221 QENFTLLTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKL 277 (546)
T ss_dssp CTTEEEECSCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHHHHHHHH
T ss_pred CCCcEEEeCCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecCccCCchh
Confidence 468999999999999985437788888754 53 67898 89998877433433
No 195
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=86.54 E-value=1.6 Score=38.15 Aligned_cols=53 Identities=13% Similarity=0.109 Sum_probs=37.4
Q ss_pred HHHHHH-HHHcCCEEEecceeeEEEecCCC-CEEEEEEc---CC--eEEEcCEEEEccCh
Q 018523 100 LPIVEH-IQSLGGEVRLNSRVQKIELNDDG-TVKNFLLT---NG--NVIDGDAYVFATPV 152 (354)
Q Consensus 100 ~~l~~~-l~~~g~~i~~~~~V~~I~~~~~g-~v~~V~~~---~g--~~~~ad~VI~a~p~ 152 (354)
..+.+. +++.|++++++++|++|..++++ ++.+|++. +| +++.+|.||++++.
T Consensus 198 ~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 257 (333)
T 1vdc_A 198 KIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGH 257 (333)
T ss_dssp HHHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred HHHHHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCC
Confidence 444433 45679999999999999975321 45456664 45 56899999998654
No 196
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=86.35 E-value=1.3 Score=40.98 Aligned_cols=43 Identities=23% Similarity=0.318 Sum_probs=33.3
Q ss_pred cCCEEEecceeeEEEecCCCCEEEEEEc---CCe--EEEcCEEEEccChh
Q 018523 109 LGGEVRLNSRVQKIELNDDGTVKNFLLT---NGN--VIDGDAYVFATPVD 153 (354)
Q Consensus 109 ~g~~i~~~~~V~~I~~~~~g~v~~V~~~---~g~--~~~ad~VI~a~p~~ 153 (354)
.|++|+++++|++|..++++ + .|++. +|+ ++.+|.||+++...
T Consensus 329 ~~v~i~~~~~v~~v~~~~~~-~-~v~~~~~~~g~~~~~~~D~Vv~AtG~~ 376 (463)
T 3s5w_A 329 PRHAFRCMTTVERATATAQG-I-ELALRDAGSGELSVETYDAVILATGYE 376 (463)
T ss_dssp CCSEEETTEEEEEEEEETTE-E-EEEEEETTTCCEEEEEESEEEECCCEE
T ss_pred CCeEEEeCCEEEEEEecCCE-E-EEEEEEcCCCCeEEEECCEEEEeeCCC
Confidence 58999999999999985433 4 36665 565 48999999998763
No 197
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=86.25 E-value=1 Score=38.62 Aligned_cols=41 Identities=20% Similarity=0.371 Sum_probs=34.5
Q ss_pred CCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHHHhhh
Q 018523 296 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVL 338 (354)
Q Consensus 296 ~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~~~~~ 338 (354)
.++..+|||.+||.... |..+..|+..|..||..|...+..
T Consensus 253 ~~t~~~~vya~GD~~~~--~~~~~~A~~~g~~aa~~i~~~l~~ 293 (297)
T 3fbs_A 253 KQTTARGIFACGDVARP--AGSVALAVGDGAMAGAAAHRSILF 293 (297)
T ss_dssp CBCSSTTEEECSGGGCT--TCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred CccCCCCEEEEeecCCc--hHHHHHHHHhHHHHHHHHHHHHhh
Confidence 45678999999998774 368899999999999999988754
No 198
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=85.60 E-value=1.7 Score=38.03 Aligned_cols=53 Identities=21% Similarity=0.326 Sum_probs=41.3
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEE---cCCeEEEcCEEEEccCh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGNVIDGDAYVFATPV 152 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~---~~g~~~~ad~VI~a~p~ 152 (354)
.+.+.+.+.+++.|+++++++ |++|..+ ++.+ .+.+ .++.++.+|.||+++..
T Consensus 85 ~~~~~~~~~~~~~gv~i~~~~-v~~i~~~-~~~~-~v~~~~~~~~~~~~~d~vvlAtG~ 140 (338)
T 3itj_A 85 ELMDRMREQSTKFGTEIITET-VSKVDLS-SKPF-KLWTEFNEDAEPVTTDAIILATGA 140 (338)
T ss_dssp HHHHHHHHHHHHTTCEEECSC-EEEEECS-SSSE-EEEETTCSSSCCEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHcCCEEEEeE-EEEEEEc-CCEE-EEEEEecCCCcEEEeCEEEECcCC
Confidence 566777777778899999999 9999975 4445 3665 35678999999998877
No 199
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=85.53 E-value=0.77 Score=43.78 Aligned_cols=56 Identities=9% Similarity=0.020 Sum_probs=40.8
Q ss_pred HHHHHHH-cCCEEEecceeeEEEecCCCCEEEEEEcC---Ce--EE---EcCEEEEccChhhHhhh
Q 018523 102 IVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTN---GN--VI---DGDAYVFATPVDILKLQ 158 (354)
Q Consensus 102 l~~~l~~-~g~~i~~~~~V~~I~~~~~g~v~~V~~~~---g~--~~---~ad~VI~a~p~~~l~~l 158 (354)
+.+.+.+ .|.+|++++.|++|..+ ++++++|++.+ |+ ++ .++.||+++.......|
T Consensus 201 ~l~~~~~~~~~~i~~~~~V~~i~~~-~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~l 265 (546)
T 1kdg_A 201 YLQTALARPNFTFKTNVMVSNVVRN-GSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRI 265 (546)
T ss_dssp HHHHHHTCTTEEEECSCCEEEEEEE-TTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHH
T ss_pred HHHHHhhCCCcEEEeCCEEEEEEEe-CCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHH
Confidence 4444444 58899999999999985 56788898865 53 33 77999998877544443
No 200
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=85.11 E-value=1.9 Score=37.85 Aligned_cols=50 Identities=24% Similarity=0.243 Sum_probs=37.4
Q ss_pred CCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHHHhhhHHHhccccc
Q 018523 297 RSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRL 347 (354)
Q Consensus 297 ~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~~~~~~~~~~~~~~ 347 (354)
++..++||.+||...... .....|+.+|..||..|...+....+.++-.+
T Consensus 277 ~t~~~~iya~GD~~~~~~-~~~~~A~~~g~~aA~~i~~~l~~~~~~~~~~~ 326 (335)
T 2a87_A 277 STSLPGVFAAGDLVDRTY-RQAVTAAGSGCAAAIDAERWLAEHAATGEADS 326 (335)
T ss_dssp BCSSTTEEECGGGTCCSC-CCHHHHHHHHHHHHHHHHHHHHHHHHCC----
T ss_pred ccCCCCEEEeeecCCccH-HHHHHHHHhHHHHHHHHHHHhhcCcCccccCC
Confidence 466789999999887532 46778999999999999999877666664443
No 201
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=84.86 E-value=0.94 Score=40.33 Aligned_cols=51 Identities=18% Similarity=0.277 Sum_probs=38.3
Q ss_pred HHHHHHHHHcC-CEEEecceeeEEEecCCCCEEEEEEcCCeEEE-cCEEEEccCh
Q 018523 100 LPIVEHIQSLG-GEVRLNSRVQKIELNDDGTVKNFLLTNGNVID-GDAYVFATPV 152 (354)
Q Consensus 100 ~~l~~~l~~~g-~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~-ad~VI~a~p~ 152 (354)
+.+.+.+++.| ++++++++|++|..++ +.+ .|++.+|+++. +|.||+++..
T Consensus 218 ~~l~~~l~~~g~v~~~~~~~v~~i~~~~-~~~-~v~~~~g~~~~~~d~vi~a~G~ 270 (369)
T 3d1c_A 218 QRLGNVIKQGARIEMNVHYTVKDIDFNN-GQY-HISFDSGQSVHTPHEPILATGF 270 (369)
T ss_dssp HHHHHHHHTTCCEEEECSCCEEEEEEET-TEE-EEEESSSCCEEESSCCEECCCB
T ss_pred HHHHHHHhhCCcEEEecCcEEEEEEecC-Cce-EEEecCCeEeccCCceEEeecc
Confidence 56666677776 9999999999998643 323 47788887665 5999998765
No 202
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=84.31 E-value=1.8 Score=39.77 Aligned_cols=50 Identities=14% Similarity=0.040 Sum_probs=37.1
Q ss_pred chHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEE--cC-----CeEEEcCEEEEccC
Q 018523 98 LCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL--TN-----GNVIDGDAYVFATP 151 (354)
Q Consensus 98 l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~--~~-----g~~~~ad~VI~a~p 151 (354)
+.+.+.+.+++.|++++++++|++|+. ++ ++ ++. .+ ++++.+|.||++.+
T Consensus 210 ~~~~~~~~l~~~gI~~~~~~~v~~v~~--~~-v~-~~~~~~~g~~~~~~~i~~D~vv~~~g 266 (437)
T 3sx6_A 210 SKGILTKGLKEEGIEAYTNCKVTKVED--NK-MY-VTQVDEKGETIKEMVLPVKFGMMIPA 266 (437)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEET--TE-EE-EEEECTTSCEEEEEEEECSEEEEECC
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEEEEC--Ce-EE-EEecccCCccccceEEEEeEEEEcCC
Confidence 556777888889999999999999974 33 31 332 23 45789999999865
No 203
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=83.99 E-value=1.8 Score=37.50 Aligned_cols=62 Identities=13% Similarity=0.214 Sum_probs=44.6
Q ss_pred CceeeeecCCCcccchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEc
Q 018523 84 GSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFA 149 (354)
Q Consensus 84 g~~~~~~~Gg~~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a 149 (354)
+..+.+...+ ..+...+.+.+++.|.+++.++ |+.|..+ +++++.|++.+|+++.+|.||++
T Consensus 170 ~~~v~i~~~~--~~~~~~~~~~l~~~g~~~~~~~-v~~~~~~-~~~~~~v~~~~g~~i~~~~~vi~ 231 (304)
T 4fk1_A 170 STDLVIATNG--NELSQTIMDELSNKNIPVITES-IRTLQGE-GGYLKKVEFHSGLRIERAGGFIV 231 (304)
T ss_dssp CSCEEEECSS--CCCCHHHHHHHHTTTCCEECSC-EEEEESG-GGCCCEEEETTSCEECCCEEEEC
T ss_pred CceEEEEecc--ccchhhhhhhhhccceeEeeee-EEEeecC-CCeeeeeeccccceeeecceeee
Confidence 3344555444 3677888888888899998765 7777763 55566788989988888877654
No 204
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=83.78 E-value=2.3 Score=36.74 Aligned_cols=44 Identities=32% Similarity=0.292 Sum_probs=34.7
Q ss_pred CCCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHHHhhhH
Q 018523 295 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLL 339 (354)
Q Consensus 295 ~~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~~~~~~ 339 (354)
.++|..+|||.+||-+..++ ..+.-|+.+|..||..|.+.|...
T Consensus 259 ~~~Ts~p~IyA~GDv~~~~~-~~~~~A~~~G~~AA~~i~~~L~~e 302 (304)
T 4fk1_A 259 FGRTSEKNIYLAGETTTQGP-SSLIIAASQGNKAAIAINSDITDE 302 (304)
T ss_dssp TCBCSSTTEEECSHHHHTSC-CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccCCCCEEEEeccCCCcc-hHHHHHHHHHHHHHHHHHHHHhhc
Confidence 45778899999999876532 346778889999999998887643
No 205
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=83.49 E-value=2.5 Score=36.64 Aligned_cols=53 Identities=19% Similarity=0.288 Sum_probs=40.3
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 153 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 153 (354)
.+.+.+.+.+++.|.++++++ |+.|..+ ++.+ .| +.+|+++.+|.||+++...
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~-v~~i~~~-~~~~-~v-~~~~~~~~~~~lv~AtG~~ 115 (320)
T 1trb_A 63 LLMERMHEHATKFETEIIFDH-INKVDLQ-NRPF-RL-NGDNGEYTCDALIIATGAS 115 (320)
T ss_dssp HHHHHHHHHHHHTTCEEECCC-EEEEECS-SSSE-EE-EESSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHCCCEEEEee-eeEEEec-CCEE-EE-EeCCCEEEcCEEEECCCCC
Confidence 456666667777899999997 9999874 3435 35 5677889999999998763
No 206
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=83.25 E-value=0.78 Score=42.23 Aligned_cols=52 Identities=17% Similarity=0.095 Sum_probs=38.1
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCC--eEEEcCEEEEccCh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG--NVIDGDAYVFATPV 152 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g--~~~~ad~VI~a~p~ 152 (354)
...+.+.+.+++.|++++++++|++|+. ++ ++ ++..+| +++.+|.||++++.
T Consensus 201 ~~~~~l~~~l~~~GV~~~~~~~v~~v~~--~~-~~-~~~~~g~~~~i~~d~vi~~~G~ 254 (430)
T 3hyw_A 201 ASKRLVEDLFAERNIDWIANVAVKAIEP--DK-VI-YEDLNGNTHEVPAKFTMFMPSF 254 (430)
T ss_dssp THHHHHHHHHHHTTCEEECSCEEEEECS--SE-EE-EECTTSCEEEEECSEEEEECEE
T ss_pred HHHHHHHHHHHhCCeEEEeCceEEEEeC--Cc-eE-EEeeCCCceEeecceEEEeccC
Confidence 3445566778889999999999999974 33 42 444444 57899999998764
No 207
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=83.23 E-value=1.8 Score=39.73 Aligned_cols=45 Identities=20% Similarity=0.258 Sum_probs=36.7
Q ss_pred HHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccCh
Q 018523 104 EHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 152 (354)
Q Consensus 104 ~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 152 (354)
+.+++.|++++++++|+.|..+ +. .|++.+|+++.+|.||+|+..
T Consensus 68 ~~~~~~gv~~~~~~~v~~i~~~-~~---~v~~~~g~~~~~d~lviAtG~ 112 (431)
T 1q1r_A 68 DAYAAQNIQLLGGTQVTAINRD-RQ---QVILSDGRALDYDRLVLATGG 112 (431)
T ss_dssp HHHHHTTEEEECSCCEEEEETT-TT---EEEETTSCEEECSEEEECCCE
T ss_pred HHHHhCCCEEEeCCEEEEEECC-CC---EEEECCCCEEECCEEEEcCCC
Confidence 4456789999999999999873 33 367778888999999998876
No 208
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=83.05 E-value=2 Score=44.00 Aligned_cols=50 Identities=18% Similarity=0.271 Sum_probs=38.7
Q ss_pred HHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcC-------C--eEEEcCEEEEccCh
Q 018523 103 VEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN-------G--NVIDGDAYVFATPV 152 (354)
Q Consensus 103 ~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~-------g--~~~~ad~VI~a~p~ 152 (354)
.+.+++.|++|++++.|++|..++++++.+|++.+ | +++.+|.||+++..
T Consensus 323 ~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~ 381 (965)
T 2gag_A 323 AAQAVADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGF 381 (965)
T ss_dssp HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCE
T ss_pred HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCc
Confidence 56678899999999999999873234565666654 5 57899999998865
No 209
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=82.59 E-value=0.45 Score=43.89 Aligned_cols=45 Identities=18% Similarity=0.186 Sum_probs=34.9
Q ss_pred HHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChh
Q 018523 104 EHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 153 (354)
Q Consensus 104 ~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 153 (354)
+.+++.|++++.+ +|++|..+ +. .|++++|+++.||++|+|+...
T Consensus 64 ~~~~~~gv~~i~~-~v~~Id~~-~~---~V~~~~g~~i~YD~LViAtG~~ 108 (430)
T 3hyw_A 64 PLLPKFNIEFINE-KAESIDPD-AN---TVTTQSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp TTGGGGTEEEECS-CEEEEETT-TT---EEEETTCCEEECSEEEECCCCE
T ss_pred HHHHHCCcEEEEe-EEEEEECC-CC---EEEECCCCEEECCEEEEeCCCC
Confidence 3345668898776 79999873 33 3788899999999999998864
No 210
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=82.51 E-value=2 Score=39.15 Aligned_cols=45 Identities=18% Similarity=0.247 Sum_probs=36.5
Q ss_pred HHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChh
Q 018523 105 HIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 153 (354)
Q Consensus 105 ~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 153 (354)
.+++.|.+++++++|+.|..+ + + .|++.+|+++.+|++|+|+...
T Consensus 66 ~~~~~~i~~~~~~~v~~id~~-~-~--~v~~~~g~~~~~d~lvlAtG~~ 110 (410)
T 3ef6_A 66 WYGEARIDMLTGPEVTALDVQ-T-R--TISLDDGTTLSADAIVIATGSR 110 (410)
T ss_dssp HHHHTTCEEEESCCEEEEETT-T-T--EEEETTSCEEECSEEEECCCEE
T ss_pred HHHHCCCEEEeCCEEEEEECC-C-C--EEEECCCCEEECCEEEEccCCc
Confidence 345679999999999999863 3 3 3778888899999999998753
No 211
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=82.48 E-value=2.6 Score=39.87 Aligned_cols=51 Identities=10% Similarity=0.182 Sum_probs=37.5
Q ss_pred HHHHHHHHH-cCCEEEecceeeEEEecCCCCEEEEEEcC---Ce--EEEcCEEEEccC
Q 018523 100 LPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTN---GN--VIDGDAYVFATP 151 (354)
Q Consensus 100 ~~l~~~l~~-~g~~i~~~~~V~~I~~~~~g~v~~V~~~~---g~--~~~ad~VI~a~p 151 (354)
..+.+.+.+ .|++|+++++|++|..+ ++++.+|++.+ |+ ++.+|.||++++
T Consensus 394 ~~l~~~l~~~~gV~v~~~~~v~~i~~~-~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G 450 (521)
T 1hyu_A 394 QVLQDKVRSLKNVDIILNAQTTEVKGD-GSKVVGLEYRDRVSGDIHSVALAGIFVQIG 450 (521)
T ss_dssp HHHHHHHTTCTTEEEECSEEEEEEEEC-SSSEEEEEEEETTTCCEEEEECSEEEECCC
T ss_pred HHHHHHHhcCCCcEEEeCCEEEEEEcC-CCcEEEEEEEeCCCCceEEEEcCEEEECcC
Confidence 345556666 58999999999999874 45666677653 53 578999998865
No 212
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=81.98 E-value=2.2 Score=39.59 Aligned_cols=44 Identities=14% Similarity=0.104 Sum_probs=33.2
Q ss_pred cCCEEEecceeeEEEecCCC-CEEEEEEc---------------CC--eEEEcCEEEEccCh
Q 018523 109 LGGEVRLNSRVQKIELNDDG-TVKNFLLT---------------NG--NVIDGDAYVFATPV 152 (354)
Q Consensus 109 ~g~~i~~~~~V~~I~~~~~g-~v~~V~~~---------------~g--~~~~ad~VI~a~p~ 152 (354)
.|+++++++.+++|..++++ ++.+|++. +| +++.+|.||.++..
T Consensus 270 ~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~ 331 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGY 331 (460)
T ss_dssp EEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCE
T ss_pred ceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCC
Confidence 78999999999999874335 66556543 34 47899999998765
No 213
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=81.79 E-value=2.5 Score=40.27 Aligned_cols=57 Identities=23% Similarity=0.309 Sum_probs=39.3
Q ss_pred chHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcC---C--eEEEcCEEEEccChhh-HhhhC
Q 018523 98 LCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN---G--NVIDGDAYVFATPVDI-LKLQL 159 (354)
Q Consensus 98 l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~---g--~~~~ad~VI~a~p~~~-l~~ll 159 (354)
+.+.|.+.+++. |+++++|++|+.++++ |+ |++.+ | .+++||.||.|..... +++.+
T Consensus 140 l~~~L~~~a~~~---v~~~~~v~~~~~~~~~-v~-v~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~l 202 (549)
T 2r0c_A 140 LAPLLAEAVGER---LRTRSRLDSFEQRDDH-VR-ATITDLRTGATRAVHARYLVACDGASSPTRKAL 202 (549)
T ss_dssp HHHHHHHHHGGG---EECSEEEEEEEECSSC-EE-EEEEETTTCCEEEEEEEEEEECCCTTCHHHHHH
T ss_pred HHHHHHHHHHHh---cccCcEEEEEEEeCCE-EE-EEEEECCCCCEEEEEeCEEEECCCCCcHHHHHc
Confidence 444555555544 9999999999986554 63 66654 6 4789999999877743 44443
No 214
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=81.76 E-value=1.4 Score=42.74 Aligned_cols=48 Identities=13% Similarity=0.149 Sum_probs=36.3
Q ss_pred cCCEEEecceeeEEEecCC-CCEEEEEEcC---Ce--EEEcCEEEEccChhhHh
Q 018523 109 LGGEVRLNSRVQKIELNDD-GTVKNFLLTN---GN--VIDGDAYVFATPVDILK 156 (354)
Q Consensus 109 ~g~~i~~~~~V~~I~~~~~-g~v~~V~~~~---g~--~~~ad~VI~a~p~~~l~ 156 (354)
.|.+|++++.|++|..+++ +++++|++.+ |+ ++.||.||+++..-...
T Consensus 273 ~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~ 326 (623)
T 3pl8_A 273 ERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNT 326 (623)
T ss_dssp EEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHH
T ss_pred CCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCH
Confidence 3789999999999998543 3677888753 54 57899999988764433
No 215
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=81.76 E-value=1.3 Score=38.94 Aligned_cols=42 Identities=14% Similarity=0.188 Sum_probs=32.9
Q ss_pred CCCCCCceEEee--ccccCCCCCchhHHHHHHHHHHHHHHHHhhh
Q 018523 296 QRSPVEGFYLAG--DYTKQKYLASMEGAVLSGKLCAQAIVQDYVL 338 (354)
Q Consensus 296 ~~~~~~~L~~aG--~~~~~~~~~~~~gAi~sG~~aa~~il~~~~~ 338 (354)
.++..+|||.+| |.+.+ .+..+..|+..|..+|..|.+.+..
T Consensus 310 ~~t~~~~vya~Gd~d~~~~-~~~~~~~A~~~g~~~a~~i~~~l~g 353 (357)
T 4a9w_A 310 RALAVPSVWLLGYGDWNGM-ASATLIGVTRYAREAVRQVTAYCAD 353 (357)
T ss_dssp BBSSCTTEEECSSCGGGST-TCSSTTTHHHHHHHHHHHHHHHTC-
T ss_pred cCCCCCCeEEecccccccc-chhhhhhhHHHHHHHHHHHHHHHHh
Confidence 456789999999 54442 2357888999999999999998854
No 216
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=81.11 E-value=1.4 Score=36.52 Aligned_cols=36 Identities=19% Similarity=0.318 Sum_probs=30.2
Q ss_pred CCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHHHh
Q 018523 298 SPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY 336 (354)
Q Consensus 298 ~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~~~ 336 (354)
+.+++||.+||.. . . +....++.+|+.+|+.|++.+
T Consensus 196 t~~p~iya~G~~a-~-~-g~~~~~~~~g~~~a~~i~~~l 231 (232)
T 2cul_A 196 KRLEGLYAVGLCV-R-E-GDYARMSEEGKRLAEHLLHEL 231 (232)
T ss_dssp TTSBSEEECGGGT-S-C-CCHHHHHHHHHHHHHHHHHHC
T ss_pred cccccceeeeecc-c-C-ccHHHHHHHHHHHHHHHHhhc
Confidence 4679999999988 3 2 466778999999999999876
No 217
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=80.93 E-value=1.8 Score=37.41 Aligned_cols=54 Identities=9% Similarity=0.265 Sum_probs=37.1
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 153 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 153 (354)
.+.+.+.+.+++.+.++..++ |..+..+.+. . .+.+.++.++.+|+||+|+...
T Consensus 67 ~l~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~-~-~~~~~~~~~~~~~~liiATG~~ 120 (314)
T 4a5l_A 67 ELMMNMRTQSEKYGTTIITET-IDHVDFSTQP-F-KLFTEEGKEVLTKSVIIATGAT 120 (314)
T ss_dssp HHHHHHHHHHHHTTCEEECCC-EEEEECSSSS-E-EEEETTCCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHhhcCcEEEEeE-EEEeecCCCc-e-EEEECCCeEEEEeEEEEccccc
Confidence 455666666777788877654 5555554333 3 3667778899999999998863
No 218
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=80.86 E-value=2.4 Score=39.09 Aligned_cols=52 Identities=19% Similarity=0.266 Sum_probs=39.0
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccCh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 152 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 152 (354)
.+.+.+.+.+++. ++++++++|++|..+ + .+..| ..+|+++.+|.||+++..
T Consensus 191 ~~~~~l~~~l~~~-v~i~~~~~v~~i~~~-~-~v~~v-~~~g~~i~~D~Vv~a~G~ 242 (449)
T 3kd9_A 191 EVTDILEEKLKKH-VNLRLQEITMKIEGE-E-RVEKV-VTDAGEYKAELVILATGI 242 (449)
T ss_dssp HHHHHHHHHHTTT-SEEEESCCEEEEECS-S-SCCEE-EETTEEEECSEEEECSCE
T ss_pred HHHHHHHHHHHhC-cEEEeCCeEEEEecc-C-cEEEE-EeCCCEEECCEEEEeeCC
Confidence 4455666667677 999999999999863 3 34334 447788999999999875
No 219
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=80.75 E-value=2.1 Score=36.85 Aligned_cols=42 Identities=21% Similarity=0.256 Sum_probs=34.1
Q ss_pred CCCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHHHhh
Q 018523 295 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYV 337 (354)
Q Consensus 295 ~~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~~~~ 337 (354)
.+++..+|||.+||..... |..+..|+..|..||..|.+.+.
T Consensus 271 ~~~t~~~~v~a~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~l~ 312 (315)
T 3r9u_A 271 KMQTSVAGLFAAGDLRKDA-PKQVICAAGDGAVAALSAMAYIE 312 (315)
T ss_dssp TCBCSSTTEEECGGGBTTC-CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccCCCCEEEeecccCCc-hhhhhhHHhhHHHHHHHHHHHHH
Confidence 3456779999999987532 35788999999999999998874
No 220
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=80.74 E-value=1.3 Score=39.68 Aligned_cols=44 Identities=25% Similarity=0.316 Sum_probs=34.4
Q ss_pred HHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccCh
Q 018523 104 EHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 152 (354)
Q Consensus 104 ~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 152 (354)
+.+++.|.+++++++|+.|..+ ++. |+ .+|+++.+|++|+|+..
T Consensus 68 ~~~~~~~v~~~~g~~v~~id~~--~~~--V~-~~g~~~~~d~lViATGs 111 (367)
T 1xhc_A 68 DWYRKRGIEIRLAEEAKLIDRG--RKV--VI-TEKGEVPYDTLVLATGA 111 (367)
T ss_dssp HHHHHHTEEEECSCCEEEEETT--TTE--EE-ESSCEEECSEEEECCCE
T ss_pred HHHHhCCcEEEECCEEEEEECC--CCE--EE-ECCcEEECCEEEECCCC
Confidence 3445679999999999999863 332 55 57788999999999875
No 221
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=80.72 E-value=2.2 Score=37.42 Aligned_cols=53 Identities=17% Similarity=0.317 Sum_probs=40.6
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEE-EEcCCeEEEcCEEEEccChh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNF-LLTNGNVIDGDAYVFATPVD 153 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V-~~~~g~~~~ad~VI~a~p~~ 153 (354)
.+.+.+.+.+.+.|.++++++ |++|.. ++. + .| .+.+|+++.+|+||+|+...
T Consensus 72 ~~~~~l~~~~~~~~v~~~~~~-v~~i~~-~~~-~-~v~~~~~g~~~~~d~lviAtG~~ 125 (335)
T 2a87_A 72 ELMDEMREQALRFGADLRMED-VESVSL-HGP-L-KSVVTADGQTHRARAVILAMGAA 125 (335)
T ss_dssp HHHHHHHHHHHHTTCEEECCC-EEEEEC-SSS-S-EEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHcCCEEEEee-EEEEEe-CCc-E-EEEEeCCCCEEEeCEEEECCCCC
Confidence 455666666777899999997 999987 333 3 36 67778889999999998763
No 222
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=80.40 E-value=3.6 Score=38.84 Aligned_cols=56 Identities=18% Similarity=0.148 Sum_probs=39.5
Q ss_pred ccchHHHHHHHHHcCCEEEecceeeEEEecCC---CCEEEEE--EcCC-e--EEEcCEEEEccCh
Q 018523 96 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDD---GTVKNFL--LTNG-N--VIDGDAYVFATPV 152 (354)
Q Consensus 96 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~---g~v~~V~--~~~g-~--~~~ad~VI~a~p~ 152 (354)
..+.+.+.+.+++.|++|+++++|++|...++ +.+ .|+ ..+| + ++.+|.||+++..
T Consensus 250 ~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~-~v~~~~~~g~~~~~~~~D~vi~a~G~ 313 (519)
T 3qfa_A 250 QDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRL-RVVAQSTNSEEIIEGEYNTVMLAIGR 313 (519)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEE-EEEEEESSSSCEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceE-EEEEEECCCcEEEEEECCEEEEecCC
Confidence 34566677778889999999999988876332 333 233 3455 2 4679999999876
No 223
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=79.89 E-value=2.4 Score=40.77 Aligned_cols=51 Identities=14% Similarity=0.075 Sum_probs=37.4
Q ss_pred HcCCEEEecceeeEEEecC---CCCEEEEEEc--CCe--EEEcC-EEEEccChhhHhhh
Q 018523 108 SLGGEVRLNSRVQKIELND---DGTVKNFLLT--NGN--VIDGD-AYVFATPVDILKLQ 158 (354)
Q Consensus 108 ~~g~~i~~~~~V~~I~~~~---~g~v~~V~~~--~g~--~~~ad-~VI~a~p~~~l~~l 158 (354)
+.+.+|++++.|++|..+. ++++++|++. +|+ ++.|+ .||++...-....|
T Consensus 239 r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqL 297 (583)
T 3qvp_A 239 RPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTI 297 (583)
T ss_dssp CTTEEEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHH
T ss_pred CCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHH
Confidence 4679999999999999853 5678899875 464 46775 68887766444433
No 224
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=78.27 E-value=2.7 Score=36.51 Aligned_cols=53 Identities=11% Similarity=0.110 Sum_probs=39.2
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 153 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 153 (354)
.+.+.+.+.+++.|.++++ ++|++|..+++ .+ .|.+ +++++.+|.||.|+...
T Consensus 73 ~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~-~~-~v~~-~~~~~~~~~li~AtG~~ 125 (319)
T 3cty_A 73 ELAKLFADHAANYAKIREG-VEVRSIKKTQG-GF-DIET-NDDTYHAKYVIITTGTT 125 (319)
T ss_dssp HHHHHHHHHHHTTSEEEET-CCEEEEEEETT-EE-EEEE-SSSEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHcCCEEEE-eeEEEEEEeCC-EE-EEEE-CCCEEEeCEEEECCCCC
Confidence 4556666667778899988 79999987533 34 3666 56689999999998863
No 225
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=78.12 E-value=2.8 Score=39.83 Aligned_cols=52 Identities=15% Similarity=0.100 Sum_probs=38.0
Q ss_pred HHcCCEEEecceeeEEEecCC--CCEEEEEEc--CCe--EE---EcCEEEEccChhhHhhh
Q 018523 107 QSLGGEVRLNSRVQKIELNDD--GTVKNFLLT--NGN--VI---DGDAYVFATPVDILKLQ 158 (354)
Q Consensus 107 ~~~g~~i~~~~~V~~I~~~~~--g~v~~V~~~--~g~--~~---~ad~VI~a~p~~~l~~l 158 (354)
++.|.+|+++++|++|..+++ +++++|++. +|+ ++ .++.||+++..-....|
T Consensus 205 ~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~sp~l 265 (536)
T 1ju2_A 205 NSNNLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQL 265 (536)
T ss_dssp CTTTEEEEESCEEEEEEECCSSSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHHHHHHH
T ss_pred cCCCcEEEeCCEEEEEEECCCCCCEEEEEEEEeCCCceEEEEeccCCEEEEcCcccCCHHH
Confidence 456899999999999998643 378888875 454 34 45889998877544444
No 226
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=77.69 E-value=2.5 Score=39.22 Aligned_cols=52 Identities=23% Similarity=0.315 Sum_probs=36.9
Q ss_pred HHHHHHHHH-cCCEEEecceeeEEEecCCCCEEEEEEc--CCe--EEEcCEEEEccCh
Q 018523 100 LPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLT--NGN--VIDGDAYVFATPV 152 (354)
Q Consensus 100 ~~l~~~l~~-~g~~i~~~~~V~~I~~~~~g~v~~V~~~--~g~--~~~ad~VI~a~p~ 152 (354)
..+.+.+++ ..++|+++++|++|..++++.+ .|++. +|+ ++.+|.||++++.
T Consensus 214 ~~~~~~l~~~l~v~i~~~~~v~~i~~~~~~~v-~v~~~~~~G~~~~i~~D~vi~a~G~ 270 (466)
T 3l8k_A 214 QDIVNTLLSILKLNIKFNSPVTEVKKIKDDEY-EVIYSTKDGSKKSIFTNSVVLAAGR 270 (466)
T ss_dssp HHHHHHHHHHHCCCEECSCCEEEEEEEETTEE-EEEECCTTSCCEEEEESCEEECCCE
T ss_pred HHHHHHHHhcCEEEEEECCEEEEEEEcCCCcE-EEEEEecCCceEEEEcCEEEECcCC
Confidence 334444432 3499999999999997542445 37776 565 7899999999876
No 227
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=77.53 E-value=3.6 Score=37.46 Aligned_cols=47 Identities=17% Similarity=0.236 Sum_probs=37.8
Q ss_pred HHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccCh
Q 018523 102 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 152 (354)
Q Consensus 102 l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 152 (354)
..+.+.+.|.+++++++|+.|..+ + + .|.+.+|+++.+|++|+|+..
T Consensus 71 ~~~~~~~~~i~~~~~~~v~~id~~-~-~--~v~~~~g~~~~~d~lvlAtG~ 117 (415)
T 3lxd_A 71 PAQFWEDKAVEMKLGAEVVSLDPA-A-H--TVKLGDGSAIEYGKLIWATGG 117 (415)
T ss_dssp CHHHHHHTTEEEEETCCEEEEETT-T-T--EEEETTSCEEEEEEEEECCCE
T ss_pred CHHHHHHCCcEEEeCCEEEEEECC-C-C--EEEECCCCEEEeeEEEEccCC
Confidence 345566789999999999999863 3 3 377888889999999998874
No 228
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=77.25 E-value=3.4 Score=32.40 Aligned_cols=41 Identities=20% Similarity=0.117 Sum_probs=32.1
Q ss_pred CCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHHHhh
Q 018523 296 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYV 337 (354)
Q Consensus 296 ~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~~~~ 337 (354)
+++..+++|.+||-..... .....|+..|..||..|...+.
T Consensus 131 ~~t~~~~i~a~GD~~~~~~-~~~~~A~~~g~~aa~~i~~~~~ 171 (180)
T 2ywl_A 131 GRTSYPRVYAAGVARGKVP-GHAIISAGDGAYVAVHLVSDLR 171 (180)
T ss_dssp CBCSSTTEEECGGGGTCCS-CCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCCCCEEEeecccCcch-hhHHHHHHhHHHHHHHHHHHhh
Confidence 3456789999999877532 2667899999999999987764
No 229
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=77.15 E-value=6.5 Score=37.73 Aligned_cols=57 Identities=12% Similarity=0.172 Sum_probs=39.0
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEec-----CC---CCEE-EEEEcCCeEEE--cCEEEEccChh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELN-----DD---GTVK-NFLLTNGNVID--GDAYVFATPVD 153 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~-----~~---g~v~-~V~~~~g~~~~--ad~VI~a~p~~ 153 (354)
.+.+.+.+.+++.|+++++++.|++|... ++ +.+. .+...+|+++. +|.||+++...
T Consensus 327 ~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~ 394 (598)
T 2x8g_A 327 QMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGRE 394 (598)
T ss_dssp HHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCc
Confidence 45566667778889999999999888642 12 4332 12335676554 99999998763
No 230
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=76.66 E-value=2.6 Score=38.38 Aligned_cols=42 Identities=19% Similarity=0.194 Sum_probs=34.3
Q ss_pred HHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccCh
Q 018523 107 QSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 152 (354)
Q Consensus 107 ~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 152 (354)
++.|.+++++++|+.|..+ + + .|++.+|+++.+|+||+|+..
T Consensus 70 ~~~~v~~~~~~~v~~i~~~-~-~--~v~~~~g~~~~~d~lviAtG~ 111 (408)
T 2gqw_A 70 RAPEVEWLLGVTAQSFDPQ-A-H--TVALSDGRTLPYGTLVLATGA 111 (408)
T ss_dssp TSCSCEEEETCCEEEEETT-T-T--EEEETTSCEEECSEEEECCCE
T ss_pred HHCCCEEEcCCEEEEEECC-C-C--EEEECCCCEEECCEEEECCCC
Confidence 4568999999999999863 3 3 367778889999999998876
No 231
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=76.03 E-value=5.3 Score=39.00 Aligned_cols=50 Identities=24% Similarity=0.249 Sum_probs=38.0
Q ss_pred hHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCC--eEEEcCEEEEccChh
Q 018523 99 CLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG--NVIDGDAYVFATPVD 153 (354)
Q Consensus 99 ~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g--~~~~ad~VI~a~p~~ 153 (354)
...+.+.+++.|++++++++|++|.. ++ + .++ .+| +++.+|.||+++...
T Consensus 576 ~~~~~~~l~~~GV~v~~~~~v~~i~~--~~-v-~~~-~~G~~~~i~~D~Vi~a~G~~ 627 (671)
T 1ps9_A 576 GWIHRTTLLSRGVKMIPGVSYQKIDD--DG-L-HVV-INGETQVLAVDNVVICAGQE 627 (671)
T ss_dssp HHHHHHHHHHTTCEEECSCEEEEEET--TE-E-EEE-ETTEEEEECCSEEEECCCEE
T ss_pred HHHHHHHHHhcCCEEEeCcEEEEEeC--Ce-E-EEe-cCCeEEEEeCCEEEECCCcc
Confidence 34456778889999999999999973 33 4 243 577 578999999998764
No 232
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=75.97 E-value=2.7 Score=40.00 Aligned_cols=47 Identities=17% Similarity=0.220 Sum_probs=37.1
Q ss_pred HHHHHHHcCCEEEe--cceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhhH
Q 018523 102 IVEHIQSLGGEVRL--NSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDIL 155 (354)
Q Consensus 102 l~~~l~~~g~~i~~--~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~l 155 (354)
..+.|.+.+++++. +++|++|.. +| |.+.+| ++++|.||+|+.+...
T Consensus 344 y~~al~~~nV~lv~~~~~~I~~it~--~g----v~~~dG-~~~~D~IV~ATGf~~~ 392 (545)
T 3uox_A 344 YYETYNRDNVHLVDIREAPIQEVTP--EG----IKTADA-AYDLDVIIYATGFDAV 392 (545)
T ss_dssp HHHHTTSTTEEEEETTTSCEEEEET--TE----EEESSC-EEECSEEEECCCCBSS
T ss_pred HHHHhcCCCEEEEecCCCCceEEcc--Ce----EEeCCC-eeecCEEEECCccccc
Confidence 34445566888887 899999974 43 778899 9999999999998753
No 233
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=75.26 E-value=3.1 Score=38.63 Aligned_cols=41 Identities=20% Similarity=0.265 Sum_probs=34.5
Q ss_pred CCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHHHhhh
Q 018523 296 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVL 338 (354)
Q Consensus 296 ~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~~~~~ 338 (354)
+++..+++|.+||-+.+. ..+..|+..|+.||..|...+..
T Consensus 405 ~~Ts~~~VfA~GD~~~g~--~~v~~A~~~G~~aA~~i~~~L~~ 445 (456)
T 2vdc_G 405 KMTNMDGVFAAGDIVRGA--SLVVWAIRDGRDAAEGIHAYAKA 445 (456)
T ss_dssp CBCSSTTEEECGGGGSSC--CSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEeccccCCc--hHHHHHHHHHHHHHHHHHHHhhc
Confidence 456789999999987642 57889999999999999998854
No 234
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=74.08 E-value=2 Score=40.86 Aligned_cols=43 Identities=19% Similarity=0.269 Sum_probs=34.6
Q ss_pred HHcCCEEEe--cceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhhH
Q 018523 107 QSLGGEVRL--NSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDIL 155 (354)
Q Consensus 107 ~~~g~~i~~--~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~l 155 (354)
.+.+++++. +++|++|.. + +|.+.||+++++|.||+|+.+...
T Consensus 341 ~~~nV~lv~~~~~~I~~it~--~----gv~~~dG~~~~~DvIV~ATGf~~~ 385 (540)
T 3gwf_A 341 NRPNVEAVAIKENPIREVTA--K----GVVTEDGVLHELDVLVFATGFDAV 385 (540)
T ss_dssp GSTTEEEEETTTSCEEEECS--S----EEEETTCCEEECSEEEECCCBSCS
T ss_pred cCCCEEEEeCCCCCccEEec--C----eEEcCCCCEEECCEEEECCccCcc
Confidence 455788886 789999874 3 478889999999999999988654
No 235
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=73.71 E-value=2.7 Score=40.48 Aligned_cols=51 Identities=12% Similarity=0.019 Sum_probs=37.2
Q ss_pred HcCCEEEecceeeEEEecCC---CCEEEEEEc--CCe--EEEc-CEEEEccChhhHhhh
Q 018523 108 SLGGEVRLNSRVQKIELNDD---GTVKNFLLT--NGN--VIDG-DAYVFATPVDILKLQ 158 (354)
Q Consensus 108 ~~g~~i~~~~~V~~I~~~~~---g~v~~V~~~--~g~--~~~a-d~VI~a~p~~~l~~l 158 (354)
+.|.+|++++.|++|..+++ +++++|++. +|+ ++.| +.||+++..-....|
T Consensus 243 ~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~sp~l 301 (587)
T 1gpe_A 243 RSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLI 301 (587)
T ss_dssp CTTEEEEESCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHH
T ss_pred CCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCCHHH
Confidence 45789999999999997532 468888874 564 5678 889998776444333
No 236
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=73.60 E-value=1.8 Score=41.45 Aligned_cols=51 Identities=12% Similarity=0.084 Sum_probs=36.7
Q ss_pred HcCCEEEecceeeEEEec---CC-CCEEEEEEcC--C-e--EEEc-CEEEEccChhhHhhh
Q 018523 108 SLGGEVRLNSRVQKIELN---DD-GTVKNFLLTN--G-N--VIDG-DAYVFATPVDILKLQ 158 (354)
Q Consensus 108 ~~g~~i~~~~~V~~I~~~---~~-g~v~~V~~~~--g-~--~~~a-d~VI~a~p~~~l~~l 158 (354)
+.+.+|++++.|++|..+ ++ +++++|++.+ | + ++.| +.||++...-....|
T Consensus 220 r~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~~~g~~~~~v~A~kEVILsAGai~SPql 280 (566)
T 3fim_B 220 RPNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVGTPIL 280 (566)
T ss_dssp CTTEEEESSCEEEEEECCEEETTEEECCEEEEESSTTSCCEEEEEEEEEEECCHHHHHHHH
T ss_pred CCCeEEECCCEEEEEEeecCCCCCCEEEEEEEEECCCceEEEEEeeeEEEEecCCcCChHH
Confidence 468999999999999985 13 5677888753 4 3 5677 678887766444443
No 237
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=72.89 E-value=5.1 Score=36.75 Aligned_cols=47 Identities=21% Similarity=0.267 Sum_probs=36.0
Q ss_pred HHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChh
Q 018523 102 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 153 (354)
Q Consensus 102 l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 153 (354)
+.+.+++.|++++. .+|++|..+ ++ .|++.+|+++.+|+||+|+...
T Consensus 65 l~~~~~~~gv~~~~-~~v~~id~~-~~---~V~~~~g~~i~~d~lviAtG~~ 111 (437)
T 3sx6_A 65 IRHYVERKGIHFIA-QSAEQIDAE-AQ---NITLADGNTVHYDYLMIATGPK 111 (437)
T ss_dssp CHHHHHTTTCEEEC-SCEEEEETT-TT---EEEETTSCEEECSEEEECCCCE
T ss_pred HHHHHHHCCCEEEE-eEEEEEEcC-CC---EEEECCCCEEECCEEEECCCCC
Confidence 44556678999974 699999863 33 3778888889999999988763
No 238
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=71.91 E-value=3.5 Score=39.51 Aligned_cols=50 Identities=14% Similarity=0.110 Sum_probs=36.3
Q ss_pred HcCCEEEecceeeEEEecC-CCCEEEEEEc--CCe--EEEc-CEEEEccChhhHhh
Q 018523 108 SLGGEVRLNSRVQKIELND-DGTVKNFLLT--NGN--VIDG-DAYVFATPVDILKL 157 (354)
Q Consensus 108 ~~g~~i~~~~~V~~I~~~~-~g~v~~V~~~--~g~--~~~a-d~VI~a~p~~~l~~ 157 (354)
+.+.+|++++.|++|..++ ++++++|++. +|+ ++.| +.||++...-....
T Consensus 218 r~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~~~g~~~~v~A~keVILsaGa~~sp~ 273 (577)
T 3q9t_A 218 KPNITIVPEVHSKRLIINEADRTCKGVTVVTAAGNELNFFADREVILSQGVFETPK 273 (577)
T ss_dssp CTTEEEECSEEEEEEEEETTTTEEEEEEEEETTSCEEEEEEEEEEEECSHHHHHHH
T ss_pred CCCeEEEcCcEEEEEEEeCCCCEEEEEEEEeCCCcEEEEEeeeEEEEcccccCChH
Confidence 4578999999999999853 5678888875 354 4677 56888776544433
No 239
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=71.56 E-value=2.6 Score=39.49 Aligned_cols=41 Identities=22% Similarity=0.263 Sum_probs=33.9
Q ss_pred HcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccCh
Q 018523 108 SLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 152 (354)
Q Consensus 108 ~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 152 (354)
+.|++++++++|++|..+ +. .|++.+|+++.+|+||+|+..
T Consensus 102 ~~gv~~~~g~~v~~id~~-~~---~V~~~~g~~i~yd~lviATGs 142 (493)
T 1m6i_A 102 NGGVAVLTGKKVVQLDVR-DN---MVKLNDGSQITYEKCLIATGG 142 (493)
T ss_dssp TCEEEEEETCCEEEEEGG-GT---EEEETTSCEEEEEEEEECCCE
T ss_pred cCCeEEEcCCEEEEEECC-CC---EEEECCCCEEECCEEEECCCC
Confidence 457899999999999874 33 377788889999999999875
No 240
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=70.30 E-value=7.6 Score=36.38 Aligned_cols=56 Identities=11% Similarity=-0.078 Sum_probs=37.5
Q ss_pred cchHHHHHHHHHcCCEEEecceeeEEEecCCC------CEEEEEEcCC-----eEEEcCEEEEccCh
Q 018523 97 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDG------TVKNFLLTNG-----NVIDGDAYVFATPV 152 (354)
Q Consensus 97 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g------~v~~V~~~~g-----~~~~ad~VI~a~p~ 152 (354)
.+.+-+....++.+..|+++++|++|...+++ ....|++.++ +++.|++||++++.
T Consensus 146 E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 146 EFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGG 212 (501)
T ss_dssp HHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCC
Confidence 34455544445567789999999999875322 1224666543 36889999998874
No 241
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=69.27 E-value=4.2 Score=37.69 Aligned_cols=42 Identities=14% Similarity=0.091 Sum_probs=31.3
Q ss_pred cCCEEEecceeeEEEecCCCCEEEEEEc----------------CC--eEEEcCEEEEccCh
Q 018523 109 LGGEVRLNSRVQKIELNDDGTVKNFLLT----------------NG--NVIDGDAYVFATPV 152 (354)
Q Consensus 109 ~g~~i~~~~~V~~I~~~~~g~v~~V~~~----------------~g--~~~~ad~VI~a~p~ 152 (354)
.|+++++++.|++|..+ +++.+|++. +| +++.+|.||.++..
T Consensus 265 ~gv~i~~~~~~~~i~~~--~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~ 324 (456)
T 1lqt_A 265 RRMVFRFLTSPIEIKGK--RKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGY 324 (456)
T ss_dssp EEEEEECSEEEEEEECS--SSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCE
T ss_pred ceEEEEeCCCCeEEecC--CcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEcccc
Confidence 68999999999999863 444345443 34 46899999999875
No 242
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=69.16 E-value=5.8 Score=36.46 Aligned_cols=48 Identities=21% Similarity=0.242 Sum_probs=34.0
Q ss_pred HHHHHHcCCEEEecceeeEEEecCCCCEEEEEE-cCCe--EEEcCEEEEccCh
Q 018523 103 VEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL-TNGN--VIDGDAYVFATPV 152 (354)
Q Consensus 103 ~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~-~~g~--~~~ad~VI~a~p~ 152 (354)
.+.+++.|++++++++|+.|..+ ++.+ .+.. .+|+ ++++|+||+|+..
T Consensus 63 ~~~~~~~gv~~~~~~~v~~i~~~-~~~v-~~~~~~~g~~~~~~~d~lviAtG~ 113 (447)
T 1nhp_A 63 GEKMESRGVNVFSNTEITAIQPK-EHQV-TVKDLVSGEERVENYDKLIISPGA 113 (447)
T ss_dssp HHHHHHTTCEEEETEEEEEEETT-TTEE-EEEETTTCCEEEEECSEEEECCCE
T ss_pred HHHHHHCCCEEEECCEEEEEeCC-CCEE-EEEecCCCceEEEeCCEEEEcCCC
Confidence 34456679999999999999874 4434 2433 2364 4899999998875
No 243
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=68.48 E-value=8.2 Score=34.87 Aligned_cols=47 Identities=23% Similarity=0.253 Sum_probs=37.0
Q ss_pred HHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccCh
Q 018523 101 PIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 152 (354)
Q Consensus 101 ~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 152 (354)
...+.+.+.|.++++ ++|++|..+ +. .|++.+|+++.+|++|+++..
T Consensus 62 ~~~~~~~~~~i~~~~-~~v~~id~~-~~---~v~~~~g~~~~~d~lvlAtG~ 108 (404)
T 3fg2_P 62 RPEKFFQDQAIELIS-DRMVSIDRE-GR---KLLLASGTAIEYGHLVLATGA 108 (404)
T ss_dssp SCHHHHHHTTEEEEC-CCEEEEETT-TT---EEEESSSCEEECSEEEECCCE
T ss_pred CCHHHHHhCCCEEEE-EEEEEEECC-CC---EEEECCCCEEECCEEEEeeCC
Confidence 344555678999999 999999863 33 377888889999999999875
No 244
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=67.77 E-value=6.3 Score=36.66 Aligned_cols=48 Identities=19% Similarity=0.237 Sum_probs=34.1
Q ss_pred HHHHHH-cCCEEEecceeeEEEecCCCCEEEEEE-cCCe--EEEcCEEEEccCh
Q 018523 103 VEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLL-TNGN--VIDGDAYVFATPV 152 (354)
Q Consensus 103 ~~~l~~-~g~~i~~~~~V~~I~~~~~g~v~~V~~-~~g~--~~~ad~VI~a~p~ 152 (354)
.+.+.+ .|.+++++++|+.|..+ ++.+ .+.. .+|+ ++.+|+||+|+..
T Consensus 99 ~~~~~~~~gv~~~~~~~v~~i~~~-~~~v-~v~~~~~g~~~~~~~d~lviAtG~ 150 (480)
T 3cgb_A 99 VKTFRDKYGIDAKVRHEVTKVDTE-KKIV-YAEHTKTKDVFEFSYDRLLIATGV 150 (480)
T ss_dssp HHHHHHTTCCEEESSEEEEEEETT-TTEE-EEEETTTCCEEEEECSEEEECCCE
T ss_pred HHHHHhhcCCEEEeCCEEEEEECC-CCEE-EEEEcCCCceEEEEcCEEEECCCC
Confidence 344433 48999999999999874 4434 2443 3465 7899999998875
No 245
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=67.75 E-value=6.1 Score=35.75 Aligned_cols=42 Identities=21% Similarity=0.216 Sum_probs=34.1
Q ss_pred CCCC-CCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHHHh
Q 018523 295 LQRS-PVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY 336 (354)
Q Consensus 295 ~~~~-~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~~~ 336 (354)
..++ ..+|||.+||.+....|.....|...|..+|+.|...+
T Consensus 293 ~~~~~~~~~vfa~GD~~~~~~~~~~~~A~~q~~~aa~~i~~~l 335 (409)
T 3h8l_A 293 NMVSIKYDNVYAVGDANSMTVPKLGYLAVMTGRIAAQHLANRL 335 (409)
T ss_dssp TSBBSSCTTEEECGGGBTTCCSCCHHHHHHHHHHHHHHHHHHT
T ss_pred ccccCCCCCEEEeehhccCCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 3455 57999999998874444577889999999999999987
No 246
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=67.72 E-value=9.7 Score=34.21 Aligned_cols=40 Identities=25% Similarity=0.158 Sum_probs=31.5
Q ss_pred CCCCceEEeeccccC-CCCCchhHHHHHHHHHHHHHHHHhh
Q 018523 298 SPVEGFYLAGDYTKQ-KYLASMEGAVLSGKLCAQAIVQDYV 337 (354)
Q Consensus 298 ~~~~~L~~aG~~~~~-~~~~~~~gAi~sG~~aa~~il~~~~ 337 (354)
+..+|+|.+||-+.. ..|.....|...|..+|+.|+..+.
T Consensus 284 t~~p~VfAiGDva~~~~~pk~a~~A~~qa~v~A~ni~~~l~ 324 (401)
T 3vrd_B 284 SLQPGIHVIGDACNAAPMPKSAYSANSQAKVAAAAVVALLK 324 (401)
T ss_dssp SSSTTEEECGGGBCCTTSCBSHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEecccccCCCCCchHHHHHHHHHHHHHHHHHHhc
Confidence 557999999997653 2344567789999999999998774
No 247
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=67.40 E-value=5.8 Score=37.00 Aligned_cols=46 Identities=37% Similarity=0.487 Sum_probs=34.1
Q ss_pred HHHHHHcCCEEEecceeeEEEecCCCCEEEEEEc-CC--eEEEcCEEEEccCh
Q 018523 103 VEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT-NG--NVIDGDAYVFATPV 152 (354)
Q Consensus 103 ~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~-~g--~~~~ad~VI~a~p~ 152 (354)
.+.+++.|++++++++|+.|..+ ++.+ ++. +| +++++|+||+|+..
T Consensus 99 ~~~~~~~gv~v~~~~~v~~i~~~-~~~v---~v~~~g~~~~~~~d~lviAtG~ 147 (490)
T 2bc0_A 99 KEELESLGAKVYMESPVQSIDYD-AKTV---TALVDGKNHVETYDKLIFATGS 147 (490)
T ss_dssp HHHHHHTTCEEETTCCEEEEETT-TTEE---EEEETTEEEEEECSEEEECCCE
T ss_pred HHHHHhCCCEEEeCCEEEEEECC-CCEE---EEEeCCcEEEEECCEEEECCCC
Confidence 44556789999999999999864 4433 333 43 57899999998875
No 248
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=65.85 E-value=13 Score=38.20 Aligned_cols=50 Identities=16% Similarity=0.092 Sum_probs=36.8
Q ss_pred HHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEc------CC---------eEEEcCEEEEccCh
Q 018523 102 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT------NG---------NVIDGDAYVFATPV 152 (354)
Q Consensus 102 l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~------~g---------~~~~ad~VI~a~p~ 152 (354)
-.+.+++.|+++++++.|++|..+ ++++++|++. +| .++.+|.||+++..
T Consensus 376 e~~~~~~~Gv~~~~~~~~~~i~~~-~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~ 440 (1025)
T 1gte_A 376 EVELAKEEKCEFLPFLSPRKVIVK-GGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGS 440 (1025)
T ss_dssp HHHHHHHTTCEEECSEEEEEEEEE-TTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCE
T ss_pred HHHHHHHcCCEEEeCCCceEEEcc-CCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCC
Confidence 345667789999999999999863 5666556542 22 36899999998754
No 249
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=64.16 E-value=7.5 Score=35.75 Aligned_cols=48 Identities=15% Similarity=0.189 Sum_probs=35.0
Q ss_pred HHHHHHcCCEEEecceeeEEEecCCCCEEEEEE-cCCeEEEcCEEEEccCh
Q 018523 103 VEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL-TNGNVIDGDAYVFATPV 152 (354)
Q Consensus 103 ~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~-~~g~~~~ad~VI~a~p~ 152 (354)
.+.+++.|.+++++++|++|..+ ++.+ .+.. .+++++.+|++|+|+..
T Consensus 65 ~~~~~~~gi~~~~~~~V~~id~~-~~~v-~v~~~~~~~~~~~d~lviAtG~ 113 (452)
T 3oc4_A 65 EEELRRQKIQLLLNREVVAMDVE-NQLI-AWTRKEEQQWYSYDKLILATGA 113 (452)
T ss_dssp HHHHHHTTEEEECSCEEEEEETT-TTEE-EEEETTEEEEEECSEEEECCCC
T ss_pred HHHHHHCCCEEEECCEEEEEECC-CCEE-EEEecCceEEEEcCEEEECCCc
Confidence 34456789999999999999974 4434 2432 24567899999998876
No 250
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=63.08 E-value=9.4 Score=36.49 Aligned_cols=51 Identities=16% Similarity=0.167 Sum_probs=36.4
Q ss_pred HHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEE-cCCe--EEEcCEEEEccCh
Q 018523 100 LPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL-TNGN--VIDGDAYVFATPV 152 (354)
Q Consensus 100 ~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~-~~g~--~~~ad~VI~a~p~ 152 (354)
..+....++.|.+++++++|++|..+ ++.+ .+.. .+|+ ++.+|+||+|+..
T Consensus 97 ~~~~~~~~~~gi~v~~~~~V~~id~~-~~~v-~v~~~~~g~~~~~~~d~lviAtG~ 150 (588)
T 3ics_A 97 QTVERMSKRFNLDIRVLSEVVKINKE-EKTI-TIKNVTTNETYNEAYDVLILSPGA 150 (588)
T ss_dssp SCHHHHHHHTTCEEECSEEEEEEETT-TTEE-EEEETTTCCEEEEECSEEEECCCE
T ss_pred cCHHHHHHhcCcEEEECCEEEEEECC-CCEE-EEeecCCCCEEEEeCCEEEECCCC
Confidence 34444455779999999999999974 4434 2443 3465 6899999998875
No 251
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=62.98 E-value=8.2 Score=35.47 Aligned_cols=48 Identities=17% Similarity=0.259 Sum_probs=34.1
Q ss_pred HHHHHHcCCEEEecceeeEEEecCCCCEEEEEEc-C--CeEEEcCEEEEccCh
Q 018523 103 VEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT-N--GNVIDGDAYVFATPV 152 (354)
Q Consensus 103 ~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~-~--g~~~~ad~VI~a~p~ 152 (354)
.+.+++.|.+++++++|+.|..+ ++.+ .+... + ++++++|+||+++..
T Consensus 65 ~~~~~~~gv~~~~~~~v~~i~~~-~~~v-~v~~~~~g~~~~~~~d~lviAtGs 115 (452)
T 2cdu_A 65 PEELSNLGANVQMRHQVTNVDPE-TKTI-KVKDLITNEEKTEAYDKLIMTTGS 115 (452)
T ss_dssp HHHHHHTTCEEEESEEEEEEEGG-GTEE-EEEETTTCCEEEEECSEEEECCCE
T ss_pred HHHHHHcCCEEEeCCEEEEEEcC-CCEE-EEEecCCCceEEEECCEEEEccCC
Confidence 34456679999999999999874 3434 24331 2 457899999998875
No 252
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=61.82 E-value=7 Score=36.69 Aligned_cols=49 Identities=14% Similarity=0.129 Sum_probs=36.6
Q ss_pred cCCEEEecceeeEEEecCCCCEEEEEEcCC---eEEEcCEEEEccChhhHhhh
Q 018523 109 LGGEVRLNSRVQKIELNDDGTVKNFLLTNG---NVIDGDAYVFATPVDILKLQ 158 (354)
Q Consensus 109 ~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g---~~~~ad~VI~a~p~~~l~~l 158 (354)
.+.+|++++.|++|..+ ++++++|.+.+. .++.++.||++...-....|
T Consensus 224 ~nl~v~~~~~v~~i~~~-~~~a~gv~~~~~~~~~~~~a~~VILsAGai~SP~L 275 (526)
T 3t37_A 224 KNLTILTGSRVRRLKLE-GNQVRSLEVVGRQGSAEVFADQIVLCAGALESPAL 275 (526)
T ss_dssp TTEEEECSCEEEEEEEE-TTEEEEEEEEETTEEEEEEEEEEEECSHHHHHHHH
T ss_pred CCeEEEeCCEEEEEEec-CCeEEEEEEEecCceEEEeecceEEcccccCCcch
Confidence 46899999999999985 566777776432 35678999998776555554
No 253
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=61.81 E-value=4 Score=37.82 Aligned_cols=48 Identities=19% Similarity=0.162 Sum_probs=33.3
Q ss_pred HHHHHHcCCEEEecceeeEEEecCCCCEEEEEEc------------------CC--eEEEcCEEEEccCh
Q 018523 103 VEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT------------------NG--NVIDGDAYVFATPV 152 (354)
Q Consensus 103 ~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~------------------~g--~~~~ad~VI~a~p~ 152 (354)
.+.+++.|+++++++.+++|.. +|++.+|++. +| .++.+|.||+++..
T Consensus 309 ~~~~~~~Gv~~~~~~~~~~i~~--~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~ 376 (456)
T 2vdc_G 309 VAHAEEEGVEFIWQAAPEGFTG--DTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGF 376 (456)
T ss_dssp HHHHHHTTCEEECCSSSCCEEE--EEEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCE
T ss_pred HHHHHHCCCEEEeCCCceEEeC--CCcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCC
Confidence 3456678999999999999975 3433222221 23 36899999999875
No 254
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=61.13 E-value=5.9 Score=39.13 Aligned_cols=49 Identities=18% Similarity=0.174 Sum_probs=35.4
Q ss_pred HHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEE--cCC-eE------------------EEcCEEEEccCh
Q 018523 100 LPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL--TNG-NV------------------IDGDAYVFATPV 152 (354)
Q Consensus 100 ~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~--~~g-~~------------------~~ad~VI~a~p~ 152 (354)
..+.+.+++.|++++++++|++|.. ++ + .++. .++ ++ +.+|.||+++..
T Consensus 575 ~~~~~~l~~~GV~i~~~~~v~~i~~--~~-v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~ 644 (729)
T 1o94_A 575 PNMMRRLHELHVEELGDHFCSRIEP--GR-M-EIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGR 644 (729)
T ss_dssp HHHHHHHHHTTCEEECSEEEEEEET--TE-E-EEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCE
T ss_pred HHHHHHHHhCCCEEEcCcEEEEEEC--Ce-E-EEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCC
Confidence 4566777889999999999999974 33 3 2332 233 33 899999999875
No 255
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=60.74 E-value=13 Score=34.24 Aligned_cols=37 Identities=30% Similarity=0.366 Sum_probs=29.9
Q ss_pred CCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 018523 296 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 334 (354)
Q Consensus 296 ~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~ 334 (354)
+++..++||.+||-... +.....|+..|..||+.|..
T Consensus 296 ~~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 332 (455)
T 1ebd_A 296 CRTSVPNIFAIGDIVPG--PALAHKASYEGKVAAEAIAG 332 (455)
T ss_dssp CBCSSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHTS
T ss_pred cccCCCCEEEEeccCCC--cccHHHHHHHHHHHHHHHcC
Confidence 45678999999998764 24567899999999999874
No 256
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=60.16 E-value=11 Score=34.21 Aligned_cols=45 Identities=18% Similarity=0.186 Sum_probs=33.8
Q ss_pred HHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChh
Q 018523 104 EHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 153 (354)
Q Consensus 104 ~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~ 153 (354)
+.+++.|++++.+ +|+.|..+ +. .|++.+|+++.+|+||+++...
T Consensus 64 ~~~~~~gv~~~~~-~v~~id~~-~~---~v~~~~g~~i~~d~liiAtG~~ 108 (430)
T 3h28_A 64 PLLPKFNIEFINE-KAESIDPD-AN---TVTTQSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp TTGGGGTEEEECS-CEEEEETT-TT---EEEETTCCEEECSEEEECCCCE
T ss_pred HHHHhcCCEEEEE-EEEEEECC-CC---EEEECCCcEEECCEEEEcCCcc
Confidence 3345578899875 89999863 33 3778888889999999988653
No 257
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=59.98 E-value=6 Score=37.63 Aligned_cols=42 Identities=19% Similarity=0.168 Sum_probs=33.0
Q ss_pred HHcCCEEE--ecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhhH
Q 018523 107 QSLGGEVR--LNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDIL 155 (354)
Q Consensus 107 ~~~g~~i~--~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~l 155 (354)
.+.++++. ...+|++|.. + +|.+.+| ++++|.||+|+.+...
T Consensus 354 ~~~~V~lvd~~~~~I~~it~--~----gv~~~dG-~~~~D~iI~ATGf~~~ 397 (549)
T 4ap3_A 354 NRDNVELVDLRSTPIVGMDE--T----GIVTTGA-HYDLDMIVLATGFDAM 397 (549)
T ss_dssp GSTTEEEEETTTSCEEEEET--T----EEEESSC-EEECSEEEECCCEEES
T ss_pred cCCCEEEEeCCCCCceEEeC--C----cEEeCCC-ceecCEEEECCccccc
Confidence 45578887 3688999884 4 3778899 9999999999998654
No 258
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=59.88 E-value=9.8 Score=36.05 Aligned_cols=44 Identities=18% Similarity=0.194 Sum_probs=32.1
Q ss_pred HHcCCEEEecceeeEEEecCCCCEEEEEE-cCCe--EEEcCEEEEccCh
Q 018523 107 QSLGGEVRLNSRVQKIELNDDGTVKNFLL-TNGN--VIDGDAYVFATPV 152 (354)
Q Consensus 107 ~~~g~~i~~~~~V~~I~~~~~g~v~~V~~-~~g~--~~~ad~VI~a~p~ 152 (354)
++.|.+++++++|++|..+ ++.+ .+.. .+|+ ++.+|+||+|+..
T Consensus 69 ~~~~i~~~~~~~V~~id~~-~~~v-~~~~~~~g~~~~~~~d~lviAtG~ 115 (565)
T 3ntd_A 69 ARFNVEVRVKHEVVAIDRA-AKLV-TVRRLLDGSEYQESYDTLLLSPGA 115 (565)
T ss_dssp HHHCCEEETTEEEEEEETT-TTEE-EEEETTTCCEEEEECSEEEECCCE
T ss_pred HhcCcEEEECCEEEEEECC-CCEE-EEEecCCCCeEEEECCEEEECCCC
Confidence 3469999999999999974 4434 2433 2343 7899999999876
No 259
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=59.19 E-value=7 Score=35.91 Aligned_cols=42 Identities=24% Similarity=0.302 Sum_probs=32.9
Q ss_pred HHcCCEEEecceeeEEEecCCCCEEEEEEcCC-eEEEcCEEEEccCh
Q 018523 107 QSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG-NVIDGDAYVFATPV 152 (354)
Q Consensus 107 ~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g-~~~~ad~VI~a~p~ 152 (354)
++.|.+++++++|++|..+ + . .|.+.+| .++.+|+||+|+..
T Consensus 70 ~~~gi~v~~~~~v~~i~~~--~-~-~v~~~~g~~~~~~d~lviAtG~ 112 (449)
T 3kd9_A 70 KKRGIDLHLNAEVIEVDTG--Y-V-RVRENGGEKSYEWDYLVFANGA 112 (449)
T ss_dssp HHTTCEEETTCEEEEECSS--E-E-EEECSSSEEEEECSEEEECCCE
T ss_pred HhcCcEEEecCEEEEEecC--C-C-EEEECCceEEEEcCEEEECCCC
Confidence 4679999999999999752 2 2 3666666 47899999998875
No 260
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=58.14 E-value=15 Score=33.70 Aligned_cols=38 Identities=26% Similarity=0.290 Sum_probs=30.8
Q ss_pred CCCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 018523 295 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 334 (354)
Q Consensus 295 ~~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~ 334 (354)
.+++..++||.+||-... +.....|+..|..+|+.|+.
T Consensus 296 ~~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~g 333 (464)
T 2a8x_A 296 YMRTNVGHIYAIGDVNGL--LQLAHVAEAQGVVAAETIAG 333 (464)
T ss_dssp TSBCSSTTEEECGGGGCS--SCSHHHHHHHHHHHHHHHHT
T ss_pred CCccCCCCEEEeECcCCC--ccCHHHHHHHHHHHHHHhcC
Confidence 356778999999998764 24667899999999999975
No 261
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=57.56 E-value=23 Score=30.11 Aligned_cols=42 Identities=21% Similarity=0.232 Sum_probs=32.3
Q ss_pred CCCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHHHhh
Q 018523 295 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYV 337 (354)
Q Consensus 295 ~~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~~~~ 337 (354)
.++|..+|||.|||-+...+ ..+.-|+.+|..||..+.+.|.
T Consensus 271 ~~~Ts~pgIyA~GDv~~~~~-~~~~~A~~~G~~AA~~~~~yL~ 312 (314)
T 4a5l_A 271 GPKTSVDGVFACGDVCDRVY-RQAIVAAGSGCMAALSCEKWLQ 312 (314)
T ss_dssp TTBCSSTTEEECSTTTCSSC-CCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccCCCCEEEEEeccCCcc-hHHHHHHHHHHHHHHHHHHHHh
Confidence 35778899999999876532 2456688899999999887764
No 262
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=57.40 E-value=12 Score=34.53 Aligned_cols=38 Identities=16% Similarity=0.024 Sum_probs=30.9
Q ss_pred CCCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 018523 295 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 334 (354)
Q Consensus 295 ~~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~ 334 (354)
.+++..++||.+||-... +.....|+..|..+|+.|+.
T Consensus 312 ~~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 349 (478)
T 1v59_A 312 QFNSKFPHIKVVGDVTFG--PMLAHKAEEEGIAAVEMLKT 349 (478)
T ss_dssp TSBCSSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHHH
T ss_pred CCccCCCCEEEeeccCCC--cccHHHHHHHHHHHHHHHcC
Confidence 355678999999998764 24677899999999999986
No 263
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=56.83 E-value=9.3 Score=35.09 Aligned_cols=38 Identities=16% Similarity=0.474 Sum_probs=28.5
Q ss_pred CCCCceEEeeccccCC-CCC--chhHHHHHHHHHHHHHHHH
Q 018523 298 SPVEGFYLAGDYTKQK-YLA--SMEGAVLSGKLCAQAIVQD 335 (354)
Q Consensus 298 ~~~~~L~~aG~~~~~~-~~~--~~~gAi~sG~~aa~~il~~ 335 (354)
.+++|||+||+-++-. +.+ .+..|+.+|+.|++.+.+.
T Consensus 402 ~~i~GLy~aGEv~~v~g~~GG~~l~~a~~~G~~Ag~~aa~~ 442 (447)
T 2i0z_A 402 KFTNGLYFCGEVLDIHGYTGGYNITSALVTGRIAGTTAGEN 442 (447)
T ss_dssp SSSBTEEECGGGBSCBCCTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCEEEEEeeccCccCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 4789999999976521 222 5577999999999988654
No 264
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=55.93 E-value=12 Score=34.95 Aligned_cols=38 Identities=18% Similarity=0.280 Sum_probs=31.1
Q ss_pred CCCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 018523 295 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 334 (354)
Q Consensus 295 ~~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~ 334 (354)
.+++..++||.+||.+... .....|+..|+.||..|+.
T Consensus 300 ~~~t~~~~IyA~GD~~~~~--~~~~~A~~~g~~aa~~i~~ 337 (492)
T 3ic9_A 300 TLQTSVDHIFVAGDANNTL--TLLHEAADDGKVAGTNAGA 337 (492)
T ss_dssp TCBCSSTTEEECGGGGTSS--CSHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCCEEEEEecCCCC--ccHHHHHHHHHHHHHHHcC
Confidence 4566789999999987642 4677899999999999985
No 265
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=55.26 E-value=12 Score=34.49 Aligned_cols=38 Identities=18% Similarity=0.273 Sum_probs=31.0
Q ss_pred CCCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 018523 295 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 334 (354)
Q Consensus 295 ~~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~ 334 (354)
.+++..++||.+||-... +.....|+..|+.+|+.|+.
T Consensus 293 ~~~t~~~~iya~GD~~~~--~~~~~~A~~~g~~aa~~i~g 330 (463)
T 4dna_A 293 FSRTSTPGIYALGDVTDR--VQLTPVAIHEAMCFIETEYK 330 (463)
T ss_dssp TCBCSSTTEEECSGGGSS--CCCHHHHHHHHHHHHHHHHS
T ss_pred CCCCCCCCEEEEEecCCC--CCChHHHHHHHHHHHHHHcC
Confidence 356778999999997763 25677899999999999974
No 266
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=54.73 E-value=12 Score=34.51 Aligned_cols=38 Identities=16% Similarity=0.190 Sum_probs=31.2
Q ss_pred CCCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 018523 295 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 334 (354)
Q Consensus 295 ~~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~ 334 (354)
.+++..+|||.+||.... |.....|+..|..||+.|+.
T Consensus 295 ~~~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 332 (466)
T 3l8k_A 295 TMKTNIPNVFATGDANGL--APYYHAAVRMSIAAANNIMA 332 (466)
T ss_dssp TCBCSSTTEEECGGGTCS--CCSHHHHHHHHHHHHHHHHT
T ss_pred CccCCCCCEEEEEecCCC--CccHhHHHHHHHHHHHHHhC
Confidence 356678999999998764 35778899999999999974
No 267
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=53.49 E-value=14 Score=34.14 Aligned_cols=38 Identities=24% Similarity=0.290 Sum_probs=30.9
Q ss_pred CCCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 018523 295 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 334 (354)
Q Consensus 295 ~~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~ 334 (354)
.+++..+|||.+||-... |.....|+..|+.+|+.|..
T Consensus 305 ~~~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~g 342 (476)
T 3lad_A 305 YCATSVPGVYAIGDVVRG--AMLAHKASEEGVVVAERIAG 342 (476)
T ss_dssp TSBCSSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHHH
T ss_pred CcccCCCCEEEEEccCCC--cccHHHHHHHHHHHHHHhcC
Confidence 356778999999998743 25678899999999999974
No 268
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=53.49 E-value=13 Score=34.43 Aligned_cols=39 Identities=23% Similarity=0.357 Sum_probs=31.1
Q ss_pred CCCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHHH
Q 018523 295 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQD 335 (354)
Q Consensus 295 ~~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~~ 335 (354)
.+++..+|||.+||-... |.....|+..|+.+|+.|+..
T Consensus 318 ~~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~~ 356 (478)
T 3dk9_A 318 FQNTNVKGIYAVGDVCGK--ALLTPVAIAAGRKLAHRLFEY 356 (478)
T ss_dssp TCBCSSTTEEECGGGGCS--SCCHHHHHHHHHHHHHHHHSC
T ss_pred CcccCCCCEEEEEecCCC--CccHhHHHHHHHHHHHHHcCC
Confidence 346778999999998743 357788999999999998753
No 269
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=51.97 E-value=14 Score=34.20 Aligned_cols=39 Identities=13% Similarity=0.154 Sum_probs=31.0
Q ss_pred CCCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHHH
Q 018523 295 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQD 335 (354)
Q Consensus 295 ~~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~~ 335 (354)
.+++..++||.+||-... +.....|+..|+.+|+.|+..
T Consensus 313 ~~~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~~~ 351 (484)
T 3o0h_A 313 KMTTNVSHIWAVGDVTGH--IQLTPVAIHDAMCFVKNAFEN 351 (484)
T ss_dssp TSBCSSTTEEECGGGGTS--CCCHHHHHHHHHHHHHHHHC-
T ss_pred CCCCCCCCEEEEEecCCC--CcCHHHHHHHHHHHHHHHcCC
Confidence 356778999999998763 256778999999999999753
No 270
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=51.80 E-value=25 Score=32.09 Aligned_cols=46 Identities=15% Similarity=0.025 Sum_probs=32.4
Q ss_pred HHHcCCEEEecceeeEEEecCCCCEEEEEEc-C--CeEEEcCEEEEccChh
Q 018523 106 IQSLGGEVRLNSRVQKIELNDDGTVKNFLLT-N--GNVIDGDAYVFATPVD 153 (354)
Q Consensus 106 l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~-~--g~~~~ad~VI~a~p~~ 153 (354)
+++.|.+++++++|++|..+ ...+ .+... + +.++.+|++|+|+...
T Consensus 67 ~~~~~i~~~~~~~V~~id~~-~~~~-~~~~~~~~~~~~~~yd~lVIATGs~ 115 (437)
T 4eqs_A 67 YDRKQITVKTYHEVIAINDE-RQTV-SVLNRKTNEQFEESYDKLILSPGAS 115 (437)
T ss_dssp HHHHCCEEEETEEEEEEETT-TTEE-EEEETTTTEEEEEECSEEEECCCEE
T ss_pred HHhcCCEEEeCCeEEEEEcc-CcEE-EEEeccCCceEEEEcCEEEECCCCc
Confidence 35679999999999999873 3333 23332 2 2468899999998763
No 271
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=51.58 E-value=12 Score=34.74 Aligned_cols=38 Identities=21% Similarity=0.236 Sum_probs=31.1
Q ss_pred CCCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 018523 295 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 334 (354)
Q Consensus 295 ~~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~ 334 (354)
.+++..++||.+||-... |.....|+..|+.+|+.|+.
T Consensus 325 ~~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~g 362 (491)
T 3urh_A 325 HFQTSIAGVYAIGDVVRG--PMLAHKAEDEGVAVAEIIAG 362 (491)
T ss_dssp TCBCSSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCCCCCEEEEEecCCC--ccchhHHHHHHHHHHHHHcC
Confidence 356778999999998753 35788899999999999874
No 272
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=51.02 E-value=19 Score=33.26 Aligned_cols=43 Identities=21% Similarity=0.209 Sum_probs=29.7
Q ss_pred HcCCEEEecceeeEEEecCCCCEEEEEE-cCCe--EEEcCEEEEccCh
Q 018523 108 SLGGEVRLNSRVQKIELNDDGTVKNFLL-TNGN--VIDGDAYVFATPV 152 (354)
Q Consensus 108 ~~g~~i~~~~~V~~I~~~~~g~v~~V~~-~~g~--~~~ad~VI~a~p~ 152 (354)
..|.+++++++|++|..+ ++.+ .+.. .+|+ ++.+|++|+++..
T Consensus 78 ~~gi~~~~~~~V~~id~~-~~~v-~~~~~~~g~~~~~~~d~lviAtG~ 123 (472)
T 3iwa_A 78 NKDVEALVETRAHAIDRA-AHTV-EIENLRTGERRTLKYDKLVLALGS 123 (472)
T ss_dssp ---CEEECSEEEEEEETT-TTEE-EEEETTTCCEEEEECSEEEECCCE
T ss_pred hcCcEEEECCEEEEEECC-CCEE-EEeecCCCCEEEEECCEEEEeCCC
Confidence 468999999999999874 4433 2433 2354 7899999998875
No 273
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=50.81 E-value=16 Score=33.91 Aligned_cols=39 Identities=26% Similarity=0.295 Sum_probs=31.1
Q ss_pred CCCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 018523 295 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 334 (354)
Q Consensus 295 ~~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~ 334 (354)
.+++..++||.+||-+.+ .|.....|+..|..+|+.|+.
T Consensus 313 ~~~t~~~~IyA~GD~~~~-~~~~~~~A~~~g~~aa~~i~g 351 (483)
T 3dgh_A 313 QEATNVANIYAVGDIIYG-KPELTPVAVLAGRLLARRLYG 351 (483)
T ss_dssp TCBCSSTTEEECSTTBTT-SCCCHHHHHHHHHHHHHHHHS
T ss_pred CCccCCCCEEEEEcccCC-CCccHHHHHHHHHHHHHHHcC
Confidence 356778999999998743 235778899999999999874
No 274
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=50.68 E-value=16 Score=33.87 Aligned_cols=39 Identities=26% Similarity=0.305 Sum_probs=31.1
Q ss_pred CCCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 018523 295 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 334 (354)
Q Consensus 295 ~~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~ 334 (354)
.+++..+|||.+||-+.+ .|.....|+..|..+|+.|+.
T Consensus 313 ~~~t~~~~IyA~GD~~~~-~~~~~~~A~~~g~~aa~~i~g 351 (488)
T 3dgz_A 313 QEATSVPHIYAIGDVAEG-RPELTPTAIKAGKLLAQRLFG 351 (488)
T ss_dssp TSBCSSTTEEECGGGBTT-CCCCHHHHHHHHHHHHHHHHS
T ss_pred CCccCCCCEEEeEEecCC-CCcchhHHHHHHHHHHHHHcC
Confidence 456778999999998743 235678899999999999874
No 275
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=50.04 E-value=16 Score=33.44 Aligned_cols=38 Identities=26% Similarity=0.423 Sum_probs=30.7
Q ss_pred CCCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 018523 295 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 334 (354)
Q Consensus 295 ~~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~ 334 (354)
.+++..++||.+||-... +.....|+..|..+|+.|+.
T Consensus 290 ~~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 327 (450)
T 1ges_A 290 YQNTNIEGIYAVGDNTGA--VELTPVAVAAGRRLSERLFN 327 (450)
T ss_dssp TSBCSSTTEEECSGGGTS--CCCHHHHHHHHHHHHHHHHT
T ss_pred CCccCCCCEEEEeccCCC--CccHHHHHHHHHHHHHHHcC
Confidence 346678999999998753 25678899999999999975
No 276
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=49.62 E-value=19 Score=33.16 Aligned_cols=37 Identities=22% Similarity=0.275 Sum_probs=29.9
Q ss_pred CCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 018523 296 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 334 (354)
Q Consensus 296 ~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~ 334 (354)
+++..++||.+||-... +.....|+..|..||..|+.
T Consensus 305 ~~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~g 341 (470)
T 1dxl_A 305 FSTNVSGVYAIGDVIPG--PMLAHKAEEDGVACVEYLAG 341 (470)
T ss_dssp CBCSSTTEEECSTTSSS--CCCHHHHHHHHHHHHHHHTT
T ss_pred CccCCCCEEEEeccCCC--CccHHHHHHHHHHHHHHHcC
Confidence 45678999999998764 24567799999999999974
No 277
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=49.13 E-value=20 Score=31.99 Aligned_cols=42 Identities=14% Similarity=0.172 Sum_probs=32.5
Q ss_pred HHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccCh
Q 018523 106 IQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 152 (354)
Q Consensus 106 l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 152 (354)
+++.|.+++++++|+.|..+ +. .|++. ++++.+|++|+|+..
T Consensus 70 ~~~~~v~~~~~~~v~~i~~~-~~---~v~~~-~~~~~~d~lviAtG~ 111 (384)
T 2v3a_A 70 AEQLNARILTHTRVTGIDPG-HQ---RIWIG-EEEVRYRDLVLAWGA 111 (384)
T ss_dssp HHHTTCEEECSCCCCEEEGG-GT---EEEET-TEEEECSEEEECCCE
T ss_pred HHhCCcEEEeCCEEEEEECC-CC---EEEEC-CcEEECCEEEEeCCC
Confidence 35679999999999999863 33 25554 457999999998876
No 278
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=48.86 E-value=17 Score=33.72 Aligned_cols=37 Identities=19% Similarity=0.294 Sum_probs=30.2
Q ss_pred CCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 018523 296 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 334 (354)
Q Consensus 296 ~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~ 334 (354)
+++..++||.+||-... +.....|+..|..+|+.|+.
T Consensus 310 ~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 346 (479)
T 2hqm_A 310 QNTNVPNIYSLGDVVGK--VELTPVAIAAGRKLSNRLFG 346 (479)
T ss_dssp CBCSSTTEEECGGGTTS--SCCHHHHHHHHHHHHHHHHS
T ss_pred CccCCCCEEEEEecCCC--cccHHHHHHHHHHHHHHhcC
Confidence 46678999999998653 35678899999999999874
No 279
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=48.61 E-value=17 Score=37.43 Aligned_cols=40 Identities=15% Similarity=0.095 Sum_probs=33.3
Q ss_pred CCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHHHhh
Q 018523 296 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYV 337 (354)
Q Consensus 296 ~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~~~~ 337 (354)
+++..++||.+||-+.. +..+..|+..|+.||..|...+.
T Consensus 469 ~~Ts~~~VfA~GD~~~~--~~~~~~A~~~G~~aA~~i~~~L~ 508 (1025)
T 1gte_A 469 MQTSEPWVFAGGDIVGM--ANTTVESVNDGKQASWYIHKYIQ 508 (1025)
T ss_dssp CBCSSTTEEECSGGGCS--CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEeCCCCCC--chHHHHHHHHHHHHHHHHHHHHH
Confidence 45678999999998763 25788899999999999998765
No 280
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=48.48 E-value=18 Score=34.01 Aligned_cols=39 Identities=26% Similarity=0.338 Sum_probs=30.9
Q ss_pred CCCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 018523 295 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 334 (354)
Q Consensus 295 ~~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~ 334 (354)
.+++..+|||.+||-+.+. +.....|+..|+.||+.|+.
T Consensus 341 ~~~Ts~~~IyA~GD~~~g~-~~~~~~A~~~g~~aa~~i~g 379 (519)
T 3qfa_A 341 EEQTNVPYIYAIGDILEDK-VELTPVAIQAGRLLAQRLYA 379 (519)
T ss_dssp TSBCSSTTEEECGGGBSSS-CCCHHHHHHHHHHHHHHHHS
T ss_pred CCccCCCCEEEEEeccCCC-CccHHHHHHHHHHHHHHHcC
Confidence 3567789999999987432 35778899999999999874
No 281
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=47.73 E-value=16 Score=33.97 Aligned_cols=36 Identities=25% Similarity=0.409 Sum_probs=30.3
Q ss_pred CCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHHHhh
Q 018523 299 PVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYV 337 (354)
Q Consensus 299 ~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~~~~ 337 (354)
..++||.+||-... ..+..|+..|..||..|...++
T Consensus 342 s~~~vya~GD~~~~---~~~~~A~~~g~~aa~~i~~~lg 377 (493)
T 1y56_A 342 IKDGIYVAGSAVSI---KPHYANYLEGKLVGAYILKEFG 377 (493)
T ss_dssp EETTEEECSTTTCC---CCHHHHHHHHHHHHHHHHHHTT
T ss_pred cCCCEEEEeccCCc---cCHHHHHHHHHHHHHHHHHHcC
Confidence 45799999998765 4678899999999999998775
No 282
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=47.18 E-value=10 Score=34.40 Aligned_cols=36 Identities=28% Similarity=0.466 Sum_probs=26.3
Q ss_pred CCCCceEEeeccccCC-CC-C-chhHHHHHHHHHHHHHH
Q 018523 298 SPVEGFYLAGDYTKQK-YL-A-SMEGAVLSGKLCAQAIV 333 (354)
Q Consensus 298 ~~~~~L~~aG~~~~~~-~~-~-~~~gAi~sG~~aa~~il 333 (354)
..++||||||+-.+-. +. + .+..|..||+.|++.+.
T Consensus 361 ~~~~gly~~GE~ldv~g~~GGynlq~a~~sg~~ag~~~~ 399 (401)
T 2gqf_A 361 NQVSGLYFIGEVLDVTGWLGGYNFQWAWSSAYACALSIS 399 (401)
T ss_dssp SSSTTEEECGGGBSCEECTTTHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEEEeEEeccCCCCHHHHHHHHHHHHHHHHHh
Confidence 4679999999966521 11 2 45779999999998763
No 283
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=47.01 E-value=19 Score=33.47 Aligned_cols=38 Identities=18% Similarity=0.331 Sum_probs=30.9
Q ss_pred CCCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 018523 295 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 334 (354)
Q Consensus 295 ~~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~ 334 (354)
.+++..++||.+||-... +.....|+..|..+|+.|+.
T Consensus 313 ~~~t~~~~IyA~GD~~~~--~~l~~~A~~~g~~aa~~i~g 350 (490)
T 1fec_A 313 YSKTNVDNIYAIGDVTDR--VMLTPVAINEGAAFVDTVFA 350 (490)
T ss_dssp TCBCSSTTEEECGGGGCS--CCCHHHHHHHHHHHHHHHHS
T ss_pred CCccCCCCEEEEeccCCC--ccCHHHHHHHHHHHHHHhcC
Confidence 346678999999998753 25778899999999999974
No 284
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=46.87 E-value=19 Score=33.52 Aligned_cols=38 Identities=24% Similarity=0.348 Sum_probs=30.7
Q ss_pred CCCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 018523 295 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 334 (354)
Q Consensus 295 ~~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~ 334 (354)
.+++..++||.+||-... +.....|+..|..+|+.|+.
T Consensus 317 ~~~t~~~~IyA~GD~~~~--~~l~~~A~~~g~~aa~~i~g 354 (495)
T 2wpf_A 317 FSRTNVPNIYAIGDITDR--LMLTPVAINEGAALVDTVFG 354 (495)
T ss_dssp TCBCSSTTEEECGGGGCS--CCCHHHHHHHHHHHHHHHHS
T ss_pred CCccCCCCEEEEeccCCC--ccCHHHHHHHHHHHHHHhcC
Confidence 346678999999998753 24678899999999999874
No 285
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=46.62 E-value=16 Score=33.65 Aligned_cols=38 Identities=16% Similarity=0.257 Sum_probs=30.7
Q ss_pred CCCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 018523 295 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 334 (354)
Q Consensus 295 ~~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~ 334 (354)
.+++..++||.+||-... +.....|+..|..||+.|+.
T Consensus 307 ~~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 344 (474)
T 1zmd_A 307 RFQTKIPNIYAIGDVVAG--PMLAHKAEDEGIICVEGMAG 344 (474)
T ss_dssp TCBCSSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHTT
T ss_pred CCccCCCCEEEeeecCCC--CccHHHHHHHHHHHHHHhcC
Confidence 356778999999998764 24667899999999999975
No 286
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=46.39 E-value=15 Score=33.03 Aligned_cols=40 Identities=13% Similarity=0.130 Sum_probs=31.4
Q ss_pred CCCCCCCceEEeeccccCCC--CCchhHHHHHHHHHHHHHHH
Q 018523 295 LQRSPVEGFYLAGDYTKQKY--LASMEGAVLSGKLCAQAIVQ 334 (354)
Q Consensus 295 ~~~~~~~~L~~aG~~~~~~~--~~~~~gAi~sG~~aa~~il~ 334 (354)
.+++..++||.+||...... +..+..|+..|..||..|+.
T Consensus 252 ~~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g 293 (385)
T 3klj_A 252 HMETSIKDIYACGDVAEFYGKNPGLINIANKQGEVAGLNACG 293 (385)
T ss_dssp TCBCSSTTEEECGGGEEETTBCCCCHHHHHHHHHHHHHHHTT
T ss_pred CcccCCCCEEEEEeeEecCCCcccHHHHHHHHHHHHHHHhcC
Confidence 35677899999999876321 25678899999999999974
No 287
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=45.83 E-value=17 Score=34.31 Aligned_cols=46 Identities=17% Similarity=0.151 Sum_probs=33.2
Q ss_pred HHHHHHHcCCEEE--ecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhh
Q 018523 102 IVEHIQSLGGEVR--LNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 154 (354)
Q Consensus 102 l~~~l~~~g~~i~--~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~ 154 (354)
+.+.+.+.++++. .+++|++|.. + +|++.| +++++|.||+++.+..
T Consensus 344 y~~~~~~~~v~lv~~~~~~i~~i~~--~----gv~~~d-~~~~~D~ii~atG~~~ 391 (542)
T 1w4x_A 344 YYEMFNRDNVHLVDTLSAPIETITP--R----GVRTSE-REYELDSLVLATGFDA 391 (542)
T ss_dssp HHHHTTSTTEEEEETTTSCEEEECS--S----EEEESS-CEEECSEEEECCCCCC
T ss_pred HHHHhCCCCEEEEecCCCCceEEcC--C----eEEeCC-eEEecCEEEEcCCccc
Confidence 3444445556766 3778988863 3 377778 8899999999998865
No 288
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=45.70 E-value=21 Score=32.90 Aligned_cols=37 Identities=27% Similarity=0.359 Sum_probs=30.0
Q ss_pred CCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 018523 296 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 334 (354)
Q Consensus 296 ~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~ 334 (354)
+++..++||.+||.... +.....|+..|+.+|+.|+.
T Consensus 290 ~~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~g 326 (463)
T 2r9z_A 290 QNTNVPGVYALGDITGR--DQLTPVAIAAGRRLAERLFD 326 (463)
T ss_dssp SBCSSTTEEECGGGGTS--CCCHHHHHHHHHHHHHHHHS
T ss_pred CccCCCCEEEEeecCCC--cccHHHHHHHHHHHHHHHcC
Confidence 45678999999998753 25678899999999999874
No 289
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=45.20 E-value=17 Score=31.92 Aligned_cols=38 Identities=24% Similarity=0.360 Sum_probs=28.5
Q ss_pred CCceEEeecccc---CCC--CCchhHHHHHHHHHHHHHHHHhh
Q 018523 300 VEGFYLAGDYTK---QKY--LASMEGAVLSGKLCAQAIVQDYV 337 (354)
Q Consensus 300 ~~~L~~aG~~~~---~~~--~~~~~gAi~sG~~aa~~il~~~~ 337 (354)
+++||++|-... +.. ...+-+-+.||+.||+.|++.+.
T Consensus 283 ~~~~~~~g~~~~~~~~~~r~g~~fg~m~~sg~~~a~~~~~~~~ 325 (326)
T 2gjc_A 283 VDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp STTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCEEECChHHHHhcCCCCCChhhhhhhhhhHHHHHHHHHHhh
Confidence 589999997552 111 13567788999999999999874
No 290
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=45.12 E-value=18 Score=33.24 Aligned_cols=39 Identities=18% Similarity=0.217 Sum_probs=30.9
Q ss_pred CCCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 018523 295 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 334 (354)
Q Consensus 295 ~~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~ 334 (354)
.+++..++||.+||-... .+.....|+..|..||+.|+.
T Consensus 301 ~~~t~~~~IyA~GD~~~~-~~~~~~~A~~~g~~aa~~i~~ 339 (468)
T 2qae_A 301 HFETSIPDVYAIGDVVDK-GPMLAHKAEDEGVACAEILAG 339 (468)
T ss_dssp TSBCSSTTEEECGGGBSS-SCSCHHHHHHHHHHHHHHHTT
T ss_pred CcccCCCCEEEeeccCCC-CCccHhHHHHHHHHHHHHHcC
Confidence 356778999999998772 225677899999999999874
No 291
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=45.12 E-value=18 Score=33.57 Aligned_cols=38 Identities=26% Similarity=0.283 Sum_probs=30.6
Q ss_pred CCCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 018523 295 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 334 (354)
Q Consensus 295 ~~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~ 334 (354)
.+++..++||.+||-... |.....|+..|..+|+.|+.
T Consensus 311 ~~~t~~~~IyA~GD~~~~--~~l~~~A~~~g~~aa~~i~g 348 (482)
T 1ojt_A 311 QMRTNVPHIYAIGDIVGQ--PMLAHKAVHEGHVAAENCAG 348 (482)
T ss_dssp TSBCSSTTEEECGGGTCS--SCCHHHHHHHHHHHHHHHTT
T ss_pred CcccCCCCEEEEEcccCC--CccHHHHHHHHHHHHHHHcC
Confidence 356778999999998764 24677899999999999874
No 292
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=44.68 E-value=10 Score=36.23 Aligned_cols=38 Identities=24% Similarity=0.449 Sum_probs=28.8
Q ss_pred CCCCceEEeeccccCCC----CC--chhHHHHHHHHHHHHHHHH
Q 018523 298 SPVEGFYLAGDYTKQKY----LA--SMEGAVLSGKLCAQAIVQD 335 (354)
Q Consensus 298 ~~~~~L~~aG~~~~~~~----~~--~~~gAi~sG~~aa~~il~~ 335 (354)
++++|||-||+.+.+-+ ++ ++-.|+..|++|++.+.+.
T Consensus 525 ~~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~vfGr~Ag~~aa~~ 568 (572)
T 1d4d_A 525 KPITGLYAAGEVTGGVHGANRLGGNAISDIVTYGRIAGASAAKF 568 (572)
T ss_dssp SEEEEEEECSTTEESTTTTSCCTTHHHHHHHHHHHHHHHHHHHT
T ss_pred cccCCeeECeecccCCCCCCCCchHhHHHHHHHHHHHHHHHHHH
Confidence 78999999999765322 22 4567899999999988654
No 293
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=44.17 E-value=24 Score=33.74 Aligned_cols=39 Identities=21% Similarity=0.322 Sum_probs=30.9
Q ss_pred CCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHHH
Q 018523 296 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQD 335 (354)
Q Consensus 296 ~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~~ 335 (354)
+++..++||.+||-..+. +.....|+..|+.+|+.|+..
T Consensus 421 ~~ts~~~VyA~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~ 459 (598)
T 2x8g_A 421 EQTTVSNVYAIGDINAGK-PQLTPVAIQAGRYLARRLFAG 459 (598)
T ss_dssp SBCSSTTEEECGGGBTTS-CCCHHHHHHHHHHHHHHHHHC
T ss_pred CcCCCCCEEEEeeecCCC-CccHHHHHHhHHHHHHHHhcC
Confidence 467789999999985432 356788999999999999753
No 294
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=44.01 E-value=19 Score=33.51 Aligned_cols=38 Identities=26% Similarity=0.408 Sum_probs=30.4
Q ss_pred CCCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 018523 295 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 334 (354)
Q Consensus 295 ~~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~ 334 (354)
.+++..++||.+||-... +.....|+..|..+|+.|+.
T Consensus 304 ~~~t~~~~IyA~GD~~~~--~~l~~~A~~~g~~aa~~i~g 341 (499)
T 1xdi_A 304 VSRTLATGIYAAGDCTGL--LPLASVAAMQGRIAMYHALG 341 (499)
T ss_dssp SSBCSSTTEEECSGGGTS--CSCHHHHHHHHHHHHHHHTT
T ss_pred CcccCCCCEEEEeccCCC--cccHHHHHHHHHHHHHHhcC
Confidence 356678999999998764 24567899999999999974
No 295
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=43.33 E-value=19 Score=33.10 Aligned_cols=37 Identities=22% Similarity=0.306 Sum_probs=30.0
Q ss_pred CCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 018523 296 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 334 (354)
Q Consensus 296 ~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~ 334 (354)
+++..++||.+||-... +.....|+..|..+|+.|+.
T Consensus 297 ~~t~~~~Iya~GD~~~~--~~l~~~A~~~g~~aa~~i~g 333 (464)
T 2eq6_A 297 METSVPGVYAIGDAARP--PLLAHKAMREGLIAAENAAG 333 (464)
T ss_dssp CBCSSTTEEECGGGTCS--SCCHHHHHHHHHHHHHHHTT
T ss_pred cccCCCCEEEEeccCCC--cccHHHHHHHHHHHHHHhcC
Confidence 45678999999998764 24677899999999999874
No 296
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=42.34 E-value=21 Score=32.82 Aligned_cols=38 Identities=26% Similarity=0.219 Sum_probs=30.4
Q ss_pred CCCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 018523 295 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 334 (354)
Q Consensus 295 ~~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~ 334 (354)
.+++..+++|.+||-... |.....|+..|..+|..|+.
T Consensus 296 ~~~t~~~~iya~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 333 (467)
T 1zk7_A 296 GMRTSNPNIYAAGDCTDQ--PQFVYVAAAAGTRAAINMTG 333 (467)
T ss_dssp TCBCSSTTEEECSTTBSS--CCCHHHHHHHHHHHHHHHTT
T ss_pred CcccCCCCEEEEeccCCC--cccHHHHHHHHHHHHHHHcC
Confidence 345678999999998764 25678899999999998864
No 297
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=42.29 E-value=21 Score=33.56 Aligned_cols=38 Identities=24% Similarity=0.257 Sum_probs=30.7
Q ss_pred CCCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 018523 295 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 334 (354)
Q Consensus 295 ~~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~ 334 (354)
.+++..++||.+||-... |.....|+..|..||+.|..
T Consensus 340 ~~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~g 377 (523)
T 1mo9_A 340 YLQTSVPNVYAVGDLIGG--PMEMFKARKSGCYAARNVMG 377 (523)
T ss_dssp TSBCSSTTEEECGGGGCS--SCSHHHHHHHHHHHHHHHTT
T ss_pred CCccCCCCEEEEeecCCC--cccHHHHHHHHHHHHHHHcC
Confidence 356778999999998864 24677899999999999974
No 298
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=41.92 E-value=27 Score=31.91 Aligned_cols=37 Identities=22% Similarity=0.258 Sum_probs=30.0
Q ss_pred CCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 018523 296 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 334 (354)
Q Consensus 296 ~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~ 334 (354)
+++..+++|.+||-... +.....|...|..+|+.|+.
T Consensus 290 ~~t~~~~iya~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 326 (455)
T 2yqu_A 290 LRTRVPHIYAIGDVVRG--PMLAHKASEEGIAAVEHMVR 326 (455)
T ss_dssp SBCSSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCEEEEecCCCC--ccCHHHHHHhHHHHHHHHcC
Confidence 45667899999998764 24667799999999999985
No 299
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=41.12 E-value=25 Score=34.05 Aligned_cols=40 Identities=23% Similarity=0.353 Sum_probs=26.2
Q ss_pred CCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHHHh
Q 018523 297 RSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY 336 (354)
Q Consensus 297 ~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~~~ 336 (354)
.++++|||-||+....+.....-.++..|+.|++.+.+..
T Consensus 428 ~t~I~GLyAaGe~a~~~~~r~~~~sl~~G~~ag~~aa~~~ 467 (643)
T 1jnr_A 428 MTTVKGLFAIGDCAGANPHKFSSGSFTEGRIAAKAAVRFI 467 (643)
T ss_dssp BCSSBTEEECGGGBCSCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CceeCCEEeeeccccccccccchhHHHHHHHHHHHHHHHH
Confidence 4789999999997764321222346666777766665543
No 300
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=40.76 E-value=12 Score=34.20 Aligned_cols=33 Identities=24% Similarity=0.390 Sum_probs=22.7
Q ss_pred CCCceEEeeccccCC-C-CC-chhHHHHHHHHHHHH
Q 018523 299 PVEGFYLAGDYTKQK-Y-LA-SMEGAVLSGKLCAQA 331 (354)
Q Consensus 299 ~~~~L~~aG~~~~~~-~-~~-~~~gAi~sG~~aa~~ 331 (354)
.++||||||+-.+-. + ++ .+.-|..||+.|++.
T Consensus 381 ~~~gLy~aGE~lD~~~~~GGynlq~a~stG~~ag~~ 416 (417)
T 3v76_A 381 EVPGLYFVGECVDVTGWLGGYNFQWAWASGFVAGQD 416 (417)
T ss_dssp TSTTEEECGGGBSEEECSSSHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEeEecccCCCCHHHHHHHHHHHHHhCc
Confidence 468999999644311 0 02 567799999988764
No 301
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=40.72 E-value=23 Score=34.25 Aligned_cols=39 Identities=23% Similarity=0.411 Sum_probs=28.7
Q ss_pred CCCC-CCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHHHh
Q 018523 295 LQRS-PVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY 336 (354)
Q Consensus 295 ~~~~-~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~~~ 336 (354)
.+.+ .++||||||+-.+. .+.+.|..+|..|+..+....
T Consensus 372 tle~k~~~gLf~AGqi~g~---~Gy~eA~a~G~~AG~naa~~~ 411 (641)
T 3cp8_A 372 TMETRPVENLFFAGQINGT---SGYEEAAAQGLMAGINAVRKI 411 (641)
T ss_dssp TSBBSSSBTEEECSGGGTB---CCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCcCCEEEEEeecCC---ccHHHHHHHHHHHHHHHHHHh
Confidence 3444 47899999998776 366788889999887775443
No 302
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=40.49 E-value=15 Score=34.89 Aligned_cols=39 Identities=21% Similarity=0.505 Sum_probs=29.1
Q ss_pred CCCCCceEEeeccccCCC----CC--chhHHHHHHHHHHHHHHHH
Q 018523 297 RSPVEGFYLAGDYTKQKY----LA--SMEGAVLSGKLCAQAIVQD 335 (354)
Q Consensus 297 ~~~~~~L~~aG~~~~~~~----~~--~~~gAi~sG~~aa~~il~~ 335 (354)
.++++|||-||+.+.+-+ ++ ++-.|+..|++|++.+.+.
T Consensus 518 g~~I~GLyAaGe~~~g~~g~~~~~g~sl~~~~v~Gr~Ag~~aa~~ 562 (566)
T 1qo8_A 518 SKPIDGLFAAGEVTGGVHGYNRLGGNAIADTVVFGRIAGDNAAKH 562 (566)
T ss_dssp SCEEEEEEECSTTBCSSSTTCCCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEeCCEEecccccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHH
Confidence 368999999999765332 22 4566899999999988654
No 303
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=40.10 E-value=25 Score=35.90 Aligned_cols=39 Identities=21% Similarity=0.168 Sum_probs=32.3
Q ss_pred CCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHHHhhhH
Q 018523 298 SPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLL 339 (354)
Q Consensus 298 ~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~~~~~~ 339 (354)
+..++||.+||.... ..+..|+..|..||..|+..++..
T Consensus 408 ts~p~IyAaGD~a~~---~~l~~A~~~G~~aA~~i~~~lg~~ 446 (965)
T 2gag_A 408 DAVANQHLAGAMTGR---LDTASALSTGAATGAAAATAAGFA 446 (965)
T ss_dssp SCCTTEEECGGGGTC---CSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCCEEEEEecCCc---hhHHHHHHHHHHHHHHHHHHcCCC
Confidence 567899999998765 346689999999999999988743
No 304
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=39.29 E-value=23 Score=33.46 Aligned_cols=40 Identities=25% Similarity=0.338 Sum_probs=29.5
Q ss_pred CCCCCceEEeeccccCC-CC------CchhHHHHHHHHHHHHHHHHh
Q 018523 297 RSPVEGFYLAGDYTKQK-YL------ASMEGAVLSGKLCAQAIVQDY 336 (354)
Q Consensus 297 ~~~~~~L~~aG~~~~~~-~~------~~~~gAi~sG~~aa~~il~~~ 336 (354)
+++++|||.||+....+ +. .++-.|+..|++|++.+.+..
T Consensus 364 ~t~I~GLyAaGE~a~~g~hGanrl~gnsl~~~~vfG~~Ag~~aa~~~ 410 (540)
T 1chu_A 364 RTDVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDITRRM 410 (540)
T ss_dssp BCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCccCCEEeccccccccccCCCcCcchhHHHHHHHHHHHHHHHHHhc
Confidence 47899999999976322 11 145668889999999987654
No 305
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=39.05 E-value=25 Score=32.27 Aligned_cols=37 Identities=16% Similarity=0.277 Sum_probs=29.8
Q ss_pred CCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 018523 296 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 334 (354)
Q Consensus 296 ~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~ 334 (354)
+++..++||.+||-... +.....|...|..+|+.|..
T Consensus 293 ~~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~g 329 (458)
T 1lvl_A 293 CQTSMHNVWAIGDVAGE--PMLAHRAMAQGEMVAEIIAG 329 (458)
T ss_dssp CBCSSTTEEECGGGGCS--SCCHHHHHHHHHHHHHHHTT
T ss_pred CcCCCCCEEEeeccCCC--cccHHHHHHHHHHHHHHhcC
Confidence 45667999999998764 24677899999999999874
No 306
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=38.07 E-value=16 Score=34.82 Aligned_cols=39 Identities=21% Similarity=0.372 Sum_probs=28.9
Q ss_pred CCCCCceEEeeccccCCC----CC--chhHHHHHHHHHHHHHHHH
Q 018523 297 RSPVEGFYLAGDYTKQKY----LA--SMEGAVLSGKLCAQAIVQD 335 (354)
Q Consensus 297 ~~~~~~L~~aG~~~~~~~----~~--~~~gAi~sG~~aa~~il~~ 335 (354)
.+|++|||-||+.+.+-+ ++ ++-.|+..|++|++.+.+.
T Consensus 523 g~~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~~fGr~Ag~~aa~~ 567 (571)
T 1y0p_A 523 KQVIPGLYGAGEVTGGVHGANRLGGNAISDIITFGRLAGEEAAKY 567 (571)
T ss_dssp SCEEEEEEECSTTEESSSTTSCCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcCCcEeceEcCCCCcCCCCCchHhHHHHHHHHHHHHHHHHHH
Confidence 368999999999765332 11 4566899999999988654
No 307
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=37.04 E-value=22 Score=32.39 Aligned_cols=34 Identities=21% Similarity=0.279 Sum_probs=25.6
Q ss_pred CCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHHH
Q 018523 299 PVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQD 335 (354)
Q Consensus 299 ~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~~ 335 (354)
.++||||||+-.+. .+.+.|..+|..|+......
T Consensus 327 ~~~~Lf~AGqi~G~---~Gy~eAaa~Gl~AG~naa~~ 360 (443)
T 3g5s_A 327 EAEGLYAAGVLAGV---EGYLESAATGFLAGLNAARK 360 (443)
T ss_dssp TEEEEEECGGGGTB---CSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEECcccccc---HHHHHHHHhHHHHHHHHHHH
Confidence 36899999998776 35666777888888666544
No 308
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=36.63 E-value=82 Score=26.66 Aligned_cols=51 Identities=14% Similarity=0.155 Sum_probs=35.4
Q ss_pred chHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccCh
Q 018523 98 LCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 152 (354)
Q Consensus 98 l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~ 152 (354)
+.........+.+..+..+..+...... +. . +...++++++||+||+|+..
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~--~~~~~~~~~~~d~liiAtGs 114 (312)
T 4gcm_A 64 LSTKMFEHAKKFGAVYQYGDIKSVEDKG-EY-K--VINFGNKELTAKAVIIATGA 114 (312)
T ss_dssp HHHHHHHHHHHTTCEEEECCCCEEEECS-SC-E--EEECSSCEEEEEEEEECCCE
T ss_pred HHHHHHHHHhhccccccceeeeeeeeee-cc-e--eeccCCeEEEeceeEEcccC
Confidence 4444555555677888888887766652 33 2 44557789999999999885
No 309
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=36.46 E-value=41 Score=31.39 Aligned_cols=43 Identities=9% Similarity=0.028 Sum_probs=34.4
Q ss_pred CCCCC-CCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHHHh
Q 018523 294 PLQRS-PVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY 336 (354)
Q Consensus 294 ~~~~~-~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~~~ 336 (354)
+.+++ ..+|+|.+||.....+|..-..|.+.|..+|+.|....
T Consensus 357 ~~lq~~~~~~IfAiGD~a~~~~p~~a~~A~qqg~~~A~ni~~~~ 400 (502)
T 4g6h_A 357 DFLQVKGSNNIFAIGDNAFAGLPPTAQVAHQEAEYLAKNFDKMA 400 (502)
T ss_dssp TTSBBTTCSSEEECGGGEESSSCCCHHHHHHHHHHHHHHHHHHT
T ss_pred CccccCCCCCEEEEEcccCCCCCCchHHHHHHHHHHHHHHHHHh
Confidence 34555 47999999998876666677889999999999997654
No 310
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=36.39 E-value=32 Score=33.35 Aligned_cols=34 Identities=21% Similarity=0.343 Sum_probs=25.6
Q ss_pred CCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHHH
Q 018523 299 PVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQD 335 (354)
Q Consensus 299 ~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~~ 335 (354)
.++||||||+-.+. .+.+.|..+|..|+......
T Consensus 383 ~~~gLf~AGqinGt---tGYeEAaaqGl~AG~nAa~~ 416 (651)
T 3ces_A 383 FIQGLFFAGQINGT---TGYEEAAAQGLLAGLNAARL 416 (651)
T ss_dssp SSBTEEECSGGGTC---CCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEecCC---cChHHHHHHHHHHHHHHHHH
Confidence 36899999987766 36667888888888665543
No 311
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=36.32 E-value=29 Score=31.92 Aligned_cols=40 Identities=5% Similarity=0.032 Sum_probs=30.5
Q ss_pred CCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHHHhhh
Q 018523 298 SPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVL 338 (354)
Q Consensus 298 ~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~~~~~ 338 (354)
+..+|||.+||-..+. .+.+..|+..|..+|..|+.++..
T Consensus 349 t~~pgvya~GD~~~gp-~~~i~~a~~~g~~~a~~i~~~l~~ 388 (456)
T 1lqt_A 349 NGSPNEYVVGWIKRGP-TGVIGTNKKDAQDTVDTLIKNLGN 388 (456)
T ss_dssp TTCSSEEECTHHHHCS-CSCTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeccCCCC-chhHHHHHHHHHHHHHHHHHHHHh
Confidence 4578999999976531 124557999999999999988753
No 312
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=35.40 E-value=21 Score=33.37 Aligned_cols=37 Identities=19% Similarity=0.361 Sum_probs=27.4
Q ss_pred CCCCCceEEeeccccCCC----CC--chhHHHHHHHHHHHHHH
Q 018523 297 RSPVEGFYLAGDYTKQKY----LA--SMEGAVLSGKLCAQAIV 333 (354)
Q Consensus 297 ~~~~~~L~~aG~~~~~~~----~~--~~~gAi~sG~~aa~~il 333 (354)
-+|++|||-||+.+.+-+ ++ ++-.|+..|++|++.+.
T Consensus 465 g~~I~GLyAaGe~~gg~~g~~y~~G~sl~~~~~fGr~Ag~~aa 507 (510)
T 4at0_A 465 GEPIPGLFAAGRCTSGVCAGGYASGTSLGDGSFYGRRAGISAA 507 (510)
T ss_dssp SSEEEEEEECGGGBCCSCSSSCCTTHHHHHHHHHHHHHHHHHH
T ss_pred CCCcCCeeeceecccCCCcCCCCcHHhHHHHHHHHHHHHHHHH
Confidence 368999999999765322 22 45668999999998764
No 313
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=35.17 E-value=24 Score=32.55 Aligned_cols=41 Identities=22% Similarity=0.289 Sum_probs=30.9
Q ss_pred CCC-CCceEEeeccccCCCCCchhHHHHHHHHHHHHHHHHhhh
Q 018523 297 RSP-VEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVL 338 (354)
Q Consensus 297 ~~~-~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~~~~~ 338 (354)
++. .++||.+||-..+. .+.+..|+..|..+|..|+.++..
T Consensus 355 rt~~~p~vya~Gd~~~g~-~~~i~~a~~~g~~aa~~i~~~l~~ 396 (460)
T 1cjc_A 355 RVVDVPGLYCSGWVKRGP-TGVITTTMTDSFLTGQILLQDLKA 396 (460)
T ss_dssp EETTCTTEEECTHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcCCCCEEEEEeCCcCC-CccHHHHHHHHHHHHHHHHHHHHh
Confidence 444 68999999876531 134668999999999999988743
No 314
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=34.85 E-value=24 Score=31.17 Aligned_cols=41 Identities=20% Similarity=0.214 Sum_probs=30.2
Q ss_pred CCceEEeecccc--CCC---CCchhHHHHHHHHHHHHHHHHhhhHH
Q 018523 300 VEGFYLAGDYTK--QKY---LASMEGAVLSGKLCAQAIVQDYVLLA 340 (354)
Q Consensus 300 ~~~L~~aG~~~~--~~~---~~~~~gAi~sG~~aa~~il~~~~~~~ 340 (354)
+||||.+|-... .+. ....-+-+.||+.||+.|++.+...-
T Consensus 293 ~~gl~~~gm~~~~~~g~~rmgp~fg~m~~sg~~~a~~~~~~~~~~~ 338 (344)
T 3jsk_A 293 VPGLIVGGMELSEIDGANRMGPTFGAMALSGVKAAHEAIRVFDLRK 338 (344)
T ss_dssp ETTEEECGGGHHHHHTCEECCSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEechhhHhhcCCCCCCcccceeeecCHHHHHHHHHHHHhhh
Confidence 479999996543 111 13567788999999999999987643
No 315
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=34.83 E-value=14 Score=36.08 Aligned_cols=36 Identities=19% Similarity=0.192 Sum_probs=30.0
Q ss_pred CCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHHHh
Q 018523 298 SPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY 336 (354)
Q Consensus 298 ~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~~~ 336 (354)
+..+++|.+||...+ ..+..|+..|..+|..|...+
T Consensus 639 t~~~~VyaiGD~~~~---~~~~~A~~~g~~aa~~i~~~l 674 (690)
T 3k30_A 639 GEIASVRGIGDAWAP---GTIAAAVWSGRRAAEEFDAVL 674 (690)
T ss_dssp TSCSEEEECGGGTSC---BCHHHHHHHHHHHHHHTTCCC
T ss_pred cCCCCEEEEeCCCch---hhHHHHHHHHHHHHHHHHhhc
Confidence 356899999998876 466779999999999998764
No 316
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=32.81 E-value=43 Score=32.10 Aligned_cols=41 Identities=15% Similarity=0.301 Sum_probs=29.2
Q ss_pred CCCCCCceEEeeccccCC-CC----C--chhHHHHHHHHHHHHHHHHh
Q 018523 296 QRSPVEGFYLAGDYTKQK-YL----A--SMEGAVLSGKLCAQAIVQDY 336 (354)
Q Consensus 296 ~~~~~~~L~~aG~~~~~~-~~----~--~~~gAi~sG~~aa~~il~~~ 336 (354)
.+++++|||-||+....+ +. + ++-.|+..|++|++.+.+..
T Consensus 368 ~~~~IpGLyAaGe~a~~g~hGanrl~gnsl~~~~vfGr~Ag~~aa~~~ 415 (602)
T 1kf6_A 368 CETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGEQATERA 415 (602)
T ss_dssp SBCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccccCCEEEccccccccccCCCCCccHHHHHHHHHHHHHHHHHHHhh
Confidence 456899999999975321 11 1 35668889999998887654
No 317
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=31.98 E-value=43 Score=31.67 Aligned_cols=39 Identities=15% Similarity=0.297 Sum_probs=31.1
Q ss_pred CCCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHH
Q 018523 295 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 334 (354)
Q Consensus 295 ~~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~ 334 (354)
.+++..++||-+||-+.+ +|...+-|...|+.+++.++.
T Consensus 345 ~~~Ts~p~IyAiGDv~~~-~p~La~~A~~eg~~aa~~i~g 383 (542)
T 4b1b_A 345 LSCTNIPSIFAVGDVAEN-VPELAPVAIKAGEILARRLFK 383 (542)
T ss_dssp TSBCSSTTEEECTTSBTT-CCCCHHHHHHHHHHHHHHHHS
T ss_pred cccccCCCeEEeccccCC-chhHHHHHHHHHHHHHHHHhc
Confidence 356788999999997754 445678889999999998875
No 318
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=31.81 E-value=38 Score=32.70 Aligned_cols=33 Identities=18% Similarity=0.359 Sum_probs=24.4
Q ss_pred CCceEEeeccccCCCCCchhHHHHHHHHHHHHHHHH
Q 018523 300 VEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQD 335 (354)
Q Consensus 300 ~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~~ 335 (354)
++||||||+-.+. .+.+.|..+|..|+-.....
T Consensus 389 ~~gLf~AGqinGt---~GyeEAaaqGl~AG~nAa~~ 421 (637)
T 2zxi_A 389 IRGLFHAGNFNGT---TGYEEAAGQGIVAGINAALR 421 (637)
T ss_dssp SBTEEECGGGGTB---CSHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEeeecCCc---chHHHHHHHHHHHHHHHHHH
Confidence 6899999998776 35666677888888655443
No 319
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=30.03 E-value=26 Score=29.67 Aligned_cols=38 Identities=16% Similarity=0.210 Sum_probs=29.1
Q ss_pred CCceEEeeccccC--CC---CCchhHHHHHHHHHHHHHHHHhh
Q 018523 300 VEGFYLAGDYTKQ--KY---LASMEGAVLSGKLCAQAIVQDYV 337 (354)
Q Consensus 300 ~~~L~~aG~~~~~--~~---~~~~~gAi~sG~~aa~~il~~~~ 337 (354)
.+++|.+|+.+.. +. .+...+++.||..+|..|.+.+.
T Consensus 233 ~p~i~a~G~~~~~~~g~~~~gp~~~~~~~sG~~~a~~i~~~l~ 275 (284)
T 1rp0_A 233 VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALKALG 275 (284)
T ss_dssp ETTEEECTHHHHHHHTCEECCSCCHHHHHHHHHHHHHHHHHTT
T ss_pred cCCEEEEeeehhhhcCCCCcChHHHHHHHhHHHHHHHHHHHhh
Confidence 3799999986631 11 13678899999999999999875
No 320
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=29.93 E-value=15 Score=36.22 Aligned_cols=37 Identities=24% Similarity=0.440 Sum_probs=30.0
Q ss_pred CCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHHHh
Q 018523 297 RSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY 336 (354)
Q Consensus 297 ~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~~~ 336 (354)
++..+++|.+||...+ ..+..|+..|..||..|...+
T Consensus 663 ~t~~~~VyAiGD~~~~---~~~~~A~~~G~~aA~~i~~~l 699 (729)
T 1o94_A 663 ENDIKGIYLIGDAEAP---RLIADATFTGHRVAREIEEAN 699 (729)
T ss_dssp GGTCCEEEECGGGTSC---CCHHHHHHHHHHHHHTTTSSC
T ss_pred ccCCCCeEEEeCccch---hhHHHHHHHHHHHHHHhhhhc
Confidence 4567899999998764 467789999999999997654
No 321
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=29.84 E-value=49 Score=30.67 Aligned_cols=39 Identities=26% Similarity=0.344 Sum_probs=29.9
Q ss_pred CCCCCCceEEeeccccC--------------------------------CCCCchhHHHHHHHHHHHHHHH
Q 018523 296 QRSPVEGFYLAGDYTKQ--------------------------------KYLASMEGAVLSGKLCAQAIVQ 334 (354)
Q Consensus 296 ~~~~~~~L~~aG~~~~~--------------------------------~~~~~~~gAi~sG~~aa~~il~ 334 (354)
+++..++||.+||.... +.+....-|+..|+.+|+.|+.
T Consensus 300 ~~t~~~~iya~GD~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g 370 (500)
T 1onf_A 300 QRTSVNNIYAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFL 370 (500)
T ss_dssp CBCSSSSEEECSTTEEEC------------------------------CBCCCCHHHHHHHHHHHHHHHHS
T ss_pred cccCCCCEEEEeccccccccccccccccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHhC
Confidence 45668999999998720 2334677899999999999974
No 322
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=28.82 E-value=55 Score=31.75 Aligned_cols=41 Identities=17% Similarity=0.289 Sum_probs=28.7
Q ss_pred CCCCCCceEEeeccccCC-CC------CchhHHHHHHHHHHHHHHHHh
Q 018523 296 QRSPVEGFYLAGDYTKQK-YL------ASMEGAVLSGKLCAQAIVQDY 336 (354)
Q Consensus 296 ~~~~~~~L~~aG~~~~~~-~~------~~~~gAi~sG~~aa~~il~~~ 336 (354)
.+++++|||-||+....+ +. .++-.|+..|++|++.+.+..
T Consensus 381 ~~v~IpGLYAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa~~~ 428 (660)
T 2bs2_A 381 GEAKLKGLFSAGEAACWDMHGFNRLGGNSVSEAVVAGMIVGEYFAEHC 428 (660)
T ss_dssp SBCSSBTEEECGGGEECCSSTTCCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceecCCEEeccccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHh
Confidence 355899999999954221 11 145668889999998886654
No 323
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=28.68 E-value=17 Score=32.28 Aligned_cols=46 Identities=22% Similarity=0.178 Sum_probs=0.0
Q ss_pred chHHHHHHHHHcCCEEEecceeeEEEecCCCCEEEEEEcCCeEEEcCEEEEccChhhHhh
Q 018523 98 LCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKL 157 (354)
Q Consensus 98 l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~g~v~~V~~~~g~~~~ad~VI~a~p~~~l~~ 157 (354)
|.+.|.+.+++.|++|+++++|++|+... ++++|.||.|...... +
T Consensus 100 l~~~L~~~~~~~gv~i~~~~~v~~i~~~~-------------~~~ad~vV~AdG~~S~-R 145 (381)
T 3c4a_A 100 LVHALRDKCRSQGIAIRFESPLLEHGELP-------------LADYDLVVLANGVNHK-T 145 (381)
T ss_dssp HHHHHHHHHHHTTCEEETTCCCCSGGGCC-------------GGGCSEEEECCGGGGG-T
T ss_pred HHHHHHHHHHHCCCEEEeCCEeccchhcc-------------cccCCEEEECCCCCch-H
No 324
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=27.57 E-value=54 Score=31.83 Aligned_cols=42 Identities=19% Similarity=0.284 Sum_probs=27.5
Q ss_pred CCCCCCCceEEeeccccCCCCCchhHHHHHHHHHHHHHHHHh
Q 018523 295 LQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDY 336 (354)
Q Consensus 295 ~~~~~~~~L~~aG~~~~~~~~~~~~gAi~sG~~aa~~il~~~ 336 (354)
..++.++|||-||+-...+..+....++..|..++..+.+.+
T Consensus 447 ~~~t~v~gl~a~Ge~~~~~~hg~~~~sl~~g~~ag~~a~~~~ 488 (662)
T 3gyx_A 447 NRMTTVEGLWTCADGVGASGHKFSSGSHAEGRIVGKQMVRWY 488 (662)
T ss_dssp TTBCSSBTEECCSSSBCSCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCccCCeEeCccccccccCccHhHHHHHHHHHHHHHHHHH
Confidence 346889999999997643221224456666777776666554
No 325
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=26.78 E-value=51 Score=30.26 Aligned_cols=22 Identities=23% Similarity=0.234 Sum_probs=18.4
Q ss_pred EEEEcCCeEEEcCEEEEccChh
Q 018523 132 NFLLTNGNVIDGDAYVFATPVD 153 (354)
Q Consensus 132 ~V~~~~g~~~~ad~VI~a~p~~ 153 (354)
+|++.||+++.+|.||+++...
T Consensus 254 ~V~~~dG~~i~~D~Vi~atG~~ 275 (464)
T 2xve_A 254 NAYFADGSSEKVDAIILCTGYI 275 (464)
T ss_dssp EEEETTSCEEECSEEEECCCBC
T ss_pred EEEECCCCEEeCCEEEECCCCC
Confidence 3677889889999999998764
No 326
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=26.77 E-value=44 Score=30.36 Aligned_cols=36 Identities=17% Similarity=0.245 Sum_probs=24.3
Q ss_pred EecceeeEEEecCCCCEEEEEEcCCeE-EEcCEEEEccChh
Q 018523 114 RLNSRVQKIELNDDGTVKNFLLTNGNV-IDGDAYVFATPVD 153 (354)
Q Consensus 114 ~~~~~V~~I~~~~~g~v~~V~~~~g~~-~~ad~VI~a~p~~ 153 (354)
.++..|++|..+ ++ +|++.||++ +.+|.||+++...
T Consensus 255 ~~~~~v~~~~~~-~~---~v~~~dG~~~~~~D~vi~atG~~ 291 (447)
T 2gv8_A 255 QQVPEITKFDPT-TR---EIYLKGGKVLSNIDRVIYCTGYL 291 (447)
T ss_dssp EEECCEEEEETT-TT---EEEETTTEEECCCSEEEECCCBC
T ss_pred EEecCeEEEecC-CC---EEEECCCCEeccCCEEEECCCCC
Confidence 344566666532 22 477788876 6899999988763
No 327
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=23.78 E-value=32 Score=33.13 Aligned_cols=40 Identities=28% Similarity=0.453 Sum_probs=29.2
Q ss_pred CCCCCceEEeecccc-CCC----C--CchhHHHHHHHHHHHHHHHHh
Q 018523 297 RSPVEGFYLAGDYTK-QKY----L--ASMEGAVLSGKLCAQAIVQDY 336 (354)
Q Consensus 297 ~~~~~~L~~aG~~~~-~~~----~--~~~~gAi~sG~~aa~~il~~~ 336 (354)
.++++|||-||+... +-| . .++-.|+..|++|++.+.+..
T Consensus 386 ~t~IpGLyAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa~~~ 432 (621)
T 2h88_A 386 DKVVPGLYACGEAASASVHGANRLGANSLLDLVVFGRACALTIAETC 432 (621)
T ss_dssp EEEEEEEEECGGGEECSSSTTSCCTTSHHHHHHHHHHHHHHHHHHHC
T ss_pred CcccCceEEccccccccccCCCCCchHhHHHHHHHHHHHHHHHHHhh
Confidence 367999999999643 111 1 246778999999999887764
No 328
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=21.09 E-value=89 Score=27.74 Aligned_cols=37 Identities=27% Similarity=0.197 Sum_probs=29.9
Q ss_pred CceEEeeccccCCCC---CchhHHHHHHHHHHHHHHHHhh
Q 018523 301 EGFYLAGDYTKQKYL---ASMEGAVLSGKLCAQAIVQDYV 337 (354)
Q Consensus 301 ~~L~~aG~~~~~~~~---~~~~gAi~sG~~aa~~il~~~~ 337 (354)
+|+.+.||..+...| .|+.-|+.+|..+|+.|.+.+.
T Consensus 288 ~~v~lvGDAa~~~~P~~G~G~~~A~~~a~~la~~l~~~~~ 327 (421)
T 3nix_A 288 DGFVLTGNATEFLDPIFSSGATFAMESGSKGGKLAVQFLK 327 (421)
T ss_dssp TTEEECGGGTCBCCSTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEecccccccCCcccccHHHHHHHHHHHHHHHHHHhc
Confidence 689999998764333 5888899999999999987653
No 329
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=20.47 E-value=43 Score=31.93 Aligned_cols=38 Identities=18% Similarity=0.284 Sum_probs=27.3
Q ss_pred CCCceEEeeccccC-CC----CC--chhHHHHHHHHHHHHHHHHh
Q 018523 299 PVEGFYLAGDYTKQ-KY----LA--SMEGAVLSGKLCAQAIVQDY 336 (354)
Q Consensus 299 ~~~~L~~aG~~~~~-~~----~~--~~~gAi~sG~~aa~~il~~~ 336 (354)
+++|||-||+.... -| ++ ++-.|+..|++|++.+.+..
T Consensus 379 ~I~GLyAaGe~a~~g~hG~nrl~gnsl~~~~vfG~~Ag~~aa~~~ 423 (588)
T 2wdq_A 379 VVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQESI 423 (588)
T ss_dssp EEEEEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHTHHHHH
T ss_pred eeCCceeCccccccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhh
Confidence 78999999996432 12 11 35668889999998887654
Done!