Citrus Sinensis ID: 018524

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350----
MLPLSSFHPTFTLTPKAVPRFRKTFFSLASMSNPTEPTSQNAPQTQQNYPTPLSPPLPAISKDIELTRAMSASSKSSLYKLSRSDVLYEDEWLVAVNKPQGVYCESVLASVPCLLAGDSAESKSGRLSEGTKLNLLELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHKVSKTYIALCIGPAPKWKRITIISGHGRSKFGAWRVYAASDVGRVLPGGSVVRDMVTSFEVLSVNGEGSFKEPSELQEHEENNIVVEKKAVLDADAKKNEILVRAFPRSGRTHQIRLHCQYLGISIRGDVKYEGVYEWNGKRYDGHELHAESLSFDHPVTGCPVMVQAPLPLWGTEALQSSSK
cccccccccCEEEccccccccHHHHHHHccccccccccccccccccccccccccccccccccccCCcccccccccccccccccccEEEEcccEEEEEccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccEEEEEEccHHHHHHHHHHHHccccccEEEEEEEECccccccEEEEccccccccccEEEEEEcccccccccccccccEEEEEEEEEEccccccccccHHHHccccHHHHHHHHHHcccccccEEEEEEEcccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccEEEEEccccHHHHHHHHHHcc
*******HPTFTLTPKAVPRFRKTFFSL***************************************************KLSRSDVLYEDEWLVAVNKPQGVYCESVLASVPCLLAGDSAESKSGRLSEGTKLNLLELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHKVSKTYIALCIGPAPKWKRITIISGHGRSKFGAWRVYAASDVGRVLPGGSVVRDMVTSFEVLSVNGEGSFKEPSELQEHEENNIVVEKKAVLDADAKKNEILVRAFPRSGRTHQIRLHCQYLGISIRGDVKYEGVYEWNGKRYDGHELHAESLSFDHPVTGCPVMVQAPLPLWGTEALQSSSK
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MLPLSSFHPTFTLTPKAVPRFRKTFFSLASMSNPTEPTSQNAPQTQQNYPTPLSPPLPAISKDIELTRAMSASSKSSLYKLSRSDVLYEDEWLVAVNKPQGVYCESVLASVPCLLAGDSAESKSGRLSEGTKLNLLELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHKVSKTYIALCIGPAPKWKRITIISGHGRSKFGAWRVYAASDVGRVLPGGSVVRDMVTSFEVLSVNGEGSFKEPSELQEHEENNIVVEKKAVLDADAKKNEILVRAFPRSGRTHQIRLHCQYLGISIRGDVKYEGVYEWNGKRYDGHELHAESLSFDHPVTGCPVMVQAPLPLWGTEALQSSSK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
RNA pseudourine synthase 1 probableQ7XA65
RNA pseudourine synthase 1 probableQ2QNM3

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1V9K, chain A
Confidence level:very confident
Coverage over the Query: 86-235,268-351
View the alignment between query and template
View the model in PyMOL
Template: 1V9F, chain A
Confidence level:very confident
Coverage over the Query: 82-235,268-353
View the alignment between query and template
View the model in PyMOL
Template: 2OLW, chain A
Confidence level:confident
Coverage over the Query: 89-199,218-238,251-306
View the alignment between query and template
View the model in PyMOL
Template: 1PRZ, chain A
Confidence level:probable
Coverage over the Query: 97-129,144-174,206-222,237-350
View the alignment between query and template
View the model in PyMOL