BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018528
(354 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C6I6|ETFA_ARATH Electron transfer flavoprotein subunit alpha, mitochondrial
OS=Arabidopsis thaliana GN=ETFA PE=1 SV=1
Length = 363
Score = 525 bits (1353), Expect = e-148, Method: Compositional matrix adjust.
Identities = 257/363 (70%), Positives = 299/363 (82%), Gaps = 9/363 (2%)
Query: 1 MAARVILWALSK---------RPRCFHRPSISRSISTLVLGEHENGSIKSQSLSAVEAAK 51
M V+L AL+K R S+SR ISTL+L EHE+G+IK Q++S V AA
Sbjct: 1 MTRTVLLRALTKNKFVASNAPRSISISITSLSRCISTLILAEHESGTIKPQTVSTVVAAN 60
Query: 52 SLSDDNSVSMLLAGSGPSFNEAVKHAASSHPSISQVLVADSDKFAYPIAEPWAKLVHMIQ 111
SL + +S+S+LLAGSG S EA AAS HPS+S+VLVADSDKF Y +AEPWAKLV ++
Sbjct: 61 SLGESSSISLLLAGSGSSLQEAASQAASCHPSVSEVLVADSDKFEYSLAEPWAKLVDFVR 120
Query: 112 QREKYSHIISASGSFGKNVLPRAAALLDVSPITDVIEISGSSQFVRPIYAGNALCTVRYT 171
Q+ YSHI+++S SFGKN+LPR AALLDVSPITDV++I GS QF+RPIYAGNALCTVRYT
Sbjct: 121 QQGDYSHILASSSSFGKNILPRVAALLDVSPITDVVKILGSDQFIRPIYAGNALCTVRYT 180
Query: 172 GANPCMLTVRATSFPMPKSSAESRSNGASISQVDLSALDEDSIGKSRYVKHTSQDAERPD 231
GA PCMLT+R+TSFP+ +A S S A++SQ+DLS ++DS+ KSRYV ++QD ERPD
Sbjct: 181 GAGPCMLTIRSTSFPVTPITANSESKKATVSQIDLSNFEDDSVSKSRYVGRSTQDTERPD 240
Query: 232 LGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPNDLQVGQTGKIVA 291
LGSAR+V+TGGR LKS ENFKMIEKLAEKLG AVGATRA VDAG+VPNDLQVGQTGKIVA
Sbjct: 241 LGSARVVITGGRALKSVENFKMIEKLAEKLGGAVGATRAAVDAGYVPNDLQVGQTGKIVA 300
Query: 292 PELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKFP 351
PELYMAFGVSGAIQHLAG++DSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEK P
Sbjct: 301 PELYMAFGVSGAIQHLAGIKDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKLP 360
Query: 352 EKK 354
EKK
Sbjct: 361 EKK 363
>sp|Q75LJ3|ETFA_ORYSJ Electron transfer flavoprotein subunit alpha, mitochondrial
OS=Oryza sativa subsp. japonica GN=ETFA PE=3 SV=1
Length = 358
Score = 447 bits (1149), Expect = e-125, Method: Compositional matrix adjust.
Identities = 238/341 (69%), Positives = 285/341 (83%), Gaps = 4/341 (1%)
Query: 15 RCFHRPSISRSISTLVLGEHENGSIKSQSLSAVEAAKSLS-DDNSVSMLLAGSGPSFNEA 73
R F R S+ R +STLV+ EHE G +K SLSA+ AA+++ DDN VS+LL GSGP ++A
Sbjct: 21 RSFAR-SLPRPVSTLVVAEHEGGFVKPSSLSALAAAEAIGKDDNRVSLLLGGSGPGLHKA 79
Query: 74 VKHAASSHPSISQVLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPR 133
+HAASSHP +S+VLVADSD FA+P+AEPWA+L+ +Q + YSH+I++S SFGKN+LPR
Sbjct: 80 AEHAASSHPLVSEVLVADSDVFAHPLAEPWAELLRSVQHKGGYSHVIASSTSFGKNLLPR 139
Query: 134 AAALLDVSPITDVIEISGSSQFVRPIYAGNALCTVRYTGANPCMLTVRATSFPMPKSSAE 193
AAALLDVSP+TDV IS FVRPIYAGNALCTVRYTG +PCM+++R+TSF ++ +E
Sbjct: 140 AAALLDVSPVTDVTSISEPRVFVRPIYAGNALCTVRYTGEDPCMMSIRSTSFSPTEAMSE 199
Query: 194 SRSNGASISQVDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKM 253
++ A I+QVDLS L E S GKS +V SQD ERPDL +A +VVTGGRGLKSAENFK+
Sbjct: 200 AKV--APITQVDLSFLSEGSSGKSAWVNLKSQDTERPDLANAPVVVTGGRGLKSAENFKV 257
Query: 254 IEKLAEKLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDS 313
+E+LAEKLGAAVGATRA VDAGFVPN+LQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDS
Sbjct: 258 LEQLAEKLGAAVGATRAAVDAGFVPNELQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDS 317
Query: 314 KVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKFPEKK 354
KVIVAVNKDADAPIFQVADYG+V DLFEV+ ELL+K P+KK
Sbjct: 318 KVIVAVNKDADAPIFQVADYGIVADLFEVLDELLKKLPDKK 358
>sp|A2XNR6|ETFA_ORYSI Electron transfer flavoprotein subunit alpha, mitochondrial
OS=Oryza sativa subsp. indica GN=ETFA PE=3 SV=1
Length = 358
Score = 447 bits (1149), Expect = e-125, Method: Compositional matrix adjust.
Identities = 238/341 (69%), Positives = 285/341 (83%), Gaps = 4/341 (1%)
Query: 15 RCFHRPSISRSISTLVLGEHENGSIKSQSLSAVEAAKSLS-DDNSVSMLLAGSGPSFNEA 73
R F R S+ R +STLV+ EHE G +K SLSA+ AA+++ DDN VS+LL GSGP ++A
Sbjct: 21 RSFAR-SLPRPVSTLVVAEHEGGFVKPSSLSALAAAEAIGKDDNRVSLLLGGSGPGLHKA 79
Query: 74 VKHAASSHPSISQVLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPR 133
+HAASSHP +S+VLVADSD FA+P+AEPWA+L+ +Q + YSH+I++S SFGKN+LPR
Sbjct: 80 AEHAASSHPLVSEVLVADSDVFAHPLAEPWAELLRSVQHKGGYSHVIASSTSFGKNLLPR 139
Query: 134 AAALLDVSPITDVIEISGSSQFVRPIYAGNALCTVRYTGANPCMLTVRATSFPMPKSSAE 193
AAALLDVSP+TDV IS FVRPIYAGNALCTVRYTG +PCM+++R+TSF ++ +E
Sbjct: 140 AAALLDVSPVTDVTSISEPRVFVRPIYAGNALCTVRYTGEDPCMMSIRSTSFSPTEAMSE 199
Query: 194 SRSNGASISQVDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKM 253
++ A I+QVDLS L E S GKS +V SQD ERPDL +A +VVTGGRGLKSAENFK+
Sbjct: 200 AKV--APITQVDLSFLSEGSSGKSAWVNLKSQDTERPDLANAPVVVTGGRGLKSAENFKV 257
Query: 254 IEKLAEKLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDS 313
+E+LAEKLGAAVGATRA VDAGFVPN+LQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDS
Sbjct: 258 LEQLAEKLGAAVGATRAAVDAGFVPNELQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDS 317
Query: 314 KVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKFPEKK 354
KVIVAVNKDADAPIFQVADYG+V DLFEV+ ELL+K P+KK
Sbjct: 318 KVIVAVNKDADAPIFQVADYGIVADLFEVLDELLKKLPDKK 358
>sp|Q8HXY0|ETFA_MACFA Electron transfer flavoprotein subunit alpha, mitochondrial
OS=Macaca fascicularis GN=ETFA PE=2 SV=1
Length = 333
Score = 297 bits (760), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 164/332 (49%), Positives = 221/332 (66%), Gaps = 18/332 (5%)
Query: 24 RSISTLVLGEHENGSIKSQSLSAVEAAKSLSDDNSVSMLLAGSGPSFNEAVKHAASSHPS 83
R STLV+ EH N S+ +L+ + AA L + VS L+AG+ + V
Sbjct: 18 RFQSTLVIAEHANDSLAPITLNTITAATRLGGE--VSCLVAGTK---CDKVAQDLCKVAG 72
Query: 84 ISQVLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPI 143
I++VLVA D + +AE L+ Q++ Y+HI + + +FGKN+LPR AA L+V+PI
Sbjct: 73 IAKVLVAQHDAYRGLLAEDLTPLILATQKQFNYTHICAGASAFGKNLLPRVAAKLEVAPI 132
Query: 144 TDVIEISGSSQFVRPIYAGNALCTVRYTGANPCMLTVRATSFPMPKSSAESRSN--GASI 201
+D+I I FVR IYAGNALCTV+ + +VR TSF +S + S+ +S
Sbjct: 133 SDIIAIKSPDTFVRTIYAGNALCTVK-CDEKVKVFSVRGTSFEAAATSGGTASSEKASST 191
Query: 202 SQVDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKMIEKLAEKL 261
S V++S + + KS +RP+L A++VV+GGRGLKS ENFK++ LA++L
Sbjct: 192 SPVEISEWLDQKLTKS----------DRPELTGAKVVVSGGRGLKSGENFKLLYDLADQL 241
Query: 262 GAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNK 321
AAVGA+RA VDAGFVPND+QVGQTGKIVAPELY+A G+SGAIQHLAGM+DSK IVA+NK
Sbjct: 242 HAAVGASRAAVDAGFVPNDMQVGQTGKIVAPELYIAVGISGAIQHLAGMKDSKTIVAINK 301
Query: 322 DADAPIFQVADYGLVGDLFEVIPELLEKFPEK 353
D +APIFQVADYG+V DLF+V+PE+ E +K
Sbjct: 302 DPEAPIFQVADYGIVADLFKVVPEMTEILKKK 333
>sp|P13804|ETFA_HUMAN Electron transfer flavoprotein subunit alpha, mitochondrial OS=Homo
sapiens GN=ETFA PE=1 SV=1
Length = 333
Score = 296 bits (758), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 165/335 (49%), Positives = 222/335 (66%), Gaps = 18/335 (5%)
Query: 21 SISRSISTLVLGEHENGSIKSQSLSAVEAAKSLSDDNSVSMLLAGSGPSFNEAVKHAASS 80
S+ R STLV+ EH N S+ +L+ + AA L + VS L+AG+ + V
Sbjct: 15 SLLRFQSTLVIAEHANDSLAPITLNTITAATRLGGE--VSCLVAGTK---CDKVAQDLCK 69
Query: 81 HPSISQVLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDV 140
I++VLVA D + + E L+ Q++ Y+HI + + +FGKN+LPR AA L+V
Sbjct: 70 VAGIAKVLVAQHDVYKGLLPEELTPLILATQKQFNYTHICAGASAFGKNLLPRVAAKLEV 129
Query: 141 SPITDVIEISGSSQFVRPIYAGNALCTVRYTGANPCMLTVRATSFPMPKSSAESRSN--G 198
+PI+D+I I FVR IYAGNALCTV+ + +VR TSF +S S S+
Sbjct: 130 APISDIIAIKSPDTFVRTIYAGNALCTVK-CDEKVKVFSVRGTSFDAAATSGGSASSEKA 188
Query: 199 ASISQVDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKMIEKLA 258
+S S V++S + + KS +RP+L A++VV+GGRGLKS ENFK++ LA
Sbjct: 189 SSTSPVEISEWLDQKLTKS----------DRPELTGAKVVVSGGRGLKSGENFKLLYDLA 238
Query: 259 EKLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVA 318
++L AAVGA+RA VDAGFVPND+QVGQTGKIVAPELY+A G+SGAIQHLAGM+DSK IVA
Sbjct: 239 DQLHAAVGASRAAVDAGFVPNDMQVGQTGKIVAPELYIAVGISGAIQHLAGMKDSKTIVA 298
Query: 319 VNKDADAPIFQVADYGLVGDLFEVIPELLEKFPEK 353
+NKD +APIFQVADYG+V DLF+V+PE+ E +K
Sbjct: 299 INKDPEAPIFQVADYGIVADLFKVVPEMTEILKKK 333
>sp|Q99LC5|ETFA_MOUSE Electron transfer flavoprotein subunit alpha, mitochondrial OS=Mus
musculus GN=Etfa PE=1 SV=2
Length = 333
Score = 293 bits (749), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 163/333 (48%), Positives = 223/333 (66%), Gaps = 14/333 (4%)
Query: 21 SISRSISTLVLGEHENGSIKSQSLSAVEAAKSLSDDNSVSMLLAGSGPSFNEAVKHAASS 80
S+ R STLV+ EH N S+ +L+ + AA L + VS L+AG+ + V
Sbjct: 15 SLLRFQSTLVIAEHANDSLAPITLNTITAAGRLGGE--VSCLVAGTK---CDKVVQDLCK 69
Query: 81 HPSISQVLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDV 140
+++VLVA D + + E L+ Q++ Y+HI + + +FGKN+LPR AA L+V
Sbjct: 70 VAGVAKVLVAQHDAYKGLLPEELTPLILETQKQFSYTHICAGASAFGKNLLPRVAAKLNV 129
Query: 141 SPITDVIEISGSSQFVRPIYAGNALCTVRYTGANPCMLTVRATSFPMPKSSAESRSNGAS 200
+P++D+IEI FVR IYAGNALCTV+ + +VR TSF A + S G++
Sbjct: 130 APVSDIIEIKSPDTFVRTIYAGNALCTVK-CDEKVKVFSVRGTSF-----EAAATSGGSA 183
Query: 201 ISQVDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKMIEKLAEK 260
S+ A S+G S ++ ++RP+L A++VV+GGRGLKS ENFK++ LA++
Sbjct: 184 SSE---KAPSSSSVGISEWLDQKLTKSDRPELTGAKVVVSGGRGLKSGENFKLLYDLADQ 240
Query: 261 LGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVN 320
L AAVGA+RA VDAGFVPND+QVGQTGKIVAPELY+A G+SGAIQHLAGM+DSK IVA+N
Sbjct: 241 LHAAVGASRAAVDAGFVPNDMQVGQTGKIVAPELYIAVGISGAIQHLAGMKDSKTIVAIN 300
Query: 321 KDADAPIFQVADYGLVGDLFEVIPELLEKFPEK 353
KD +APIFQVADYG+V DLF+V+PE+ E +K
Sbjct: 301 KDPEAPIFQVADYGIVADLFKVVPEMTEILKKK 333
>sp|Q5RC31|ETFA_PONAB Electron transfer flavoprotein subunit alpha, mitochondrial
OS=Pongo abelii GN=ETFA PE=2 SV=1
Length = 333
Score = 291 bits (746), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 163/335 (48%), Positives = 221/335 (65%), Gaps = 18/335 (5%)
Query: 21 SISRSISTLVLGEHENGSIKSQSLSAVEAAKSLSDDNSVSMLLAGSGPSFNEAVKHAASS 80
S+ R STLV+ EH + S+ +L+ + AA L + VS L+AG+ + V
Sbjct: 15 SLLRFQSTLVIAEHADDSLAPITLNTITAATRLGGE--VSCLVAGTK---CDKVAQDLCK 69
Query: 81 HPSISQVLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDV 140
I++VLVA D + + E L+ Q++ Y+HI + + +FGKN+LPR AA L+V
Sbjct: 70 VAGIAKVLVAQHDVYRGLLPEELTPLILATQKQFNYTHICAGASAFGKNLLPRVAAKLEV 129
Query: 141 SPITDVIEISGSSQFVRPIYAGNALCTVRYTGANPCMLTVRATSFPMPKSSAESRSN--G 198
+PI+D+I I FVR IYAGNALCTV+ + +VR TSF +S S S+
Sbjct: 130 APISDIIAIKSPDTFVRTIYAGNALCTVK-CDEKVKVFSVRGTSFEAAATSGGSASSEKA 188
Query: 199 ASISQVDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKMIEKLA 258
+S S V++S + + KS +RP+L A++VV+GGRGLKS ENFK++ LA
Sbjct: 189 SSTSPVEISEWLDQKLTKS----------DRPELTGAKVVVSGGRGLKSGENFKLLYDLA 238
Query: 259 EKLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVA 318
++ AAVGA+RA VDAGFVPND+QVGQTGKIVAPELY+A G+SGAIQHLAGM+DSK IVA
Sbjct: 239 DQRHAAVGASRAAVDAGFVPNDMQVGQTGKIVAPELYIAVGISGAIQHLAGMKDSKTIVA 298
Query: 319 VNKDADAPIFQVADYGLVGDLFEVIPELLEKFPEK 353
+NKD +APIFQVADYG+V DLF+V+PE+ E +K
Sbjct: 299 INKDPEAPIFQVADYGIVADLFKVVPEMTEILKKK 333
>sp|P13803|ETFA_RAT Electron transfer flavoprotein subunit alpha, mitochondrial
OS=Rattus norvegicus GN=Etfa PE=1 SV=4
Length = 333
Score = 288 bits (738), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 162/333 (48%), Positives = 220/333 (66%), Gaps = 14/333 (4%)
Query: 21 SISRSISTLVLGEHENGSIKSQSLSAVEAAKSLSDDNSVSMLLAGSGPSFNEAVKHAASS 80
S+ R STLV+ EH N S+ +L+ + AA L + VS L+AG+ + V
Sbjct: 15 SLLRFQSTLVIAEHANDSLAPITLNTITAAGRLGGE--VSCLVAGTK---CDKVVQDLCK 69
Query: 81 HPSISQVLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDV 140
+++VLVA D + + E L+ Q++ Y+HI + + +FGKN+LPR AA L+V
Sbjct: 70 VAGVAKVLVAQHDAYKGLLPEELTPLILETQKQFSYTHICAGASAFGKNLLPRVAAKLNV 129
Query: 141 SPITDVIEISGSSQFVRPIYAGNALCTVRYTGANPCMLTVRATSFPMPKSSAESRSNGAS 200
+P++D+IEI FVR IYAGNALCTV+ + +VR TSF +S S S+ +
Sbjct: 130 APVSDIIEIKSPDTFVRTIYAGNALCTVK-CDEKVKVFSVRGTSFEAAAASGGSASSEKA 188
Query: 201 ISQVDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKMIEKLAEK 260
S S G S ++ ++RP+L A++VV+GGRGLKS ENFK++ LA++
Sbjct: 189 PSSS--------SAGISEWLDQKLTKSDRPELTGAKVVVSGGRGLKSGENFKLLYDLADQ 240
Query: 261 LGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVN 320
L AAVGA+RA VDAGFVPND+QVGQTGKIVAPELY+A G+SGAIQHLAGM+DSK IVA+N
Sbjct: 241 LHAAVGASRAAVDAGFVPNDMQVGQTGKIVAPELYIAVGISGAIQHLAGMKDSKTIVAIN 300
Query: 321 KDADAPIFQVADYGLVGDLFEVIPELLEKFPEK 353
KD +APIFQVADYG+V DLF+V+PE+ E +K
Sbjct: 301 KDPEAPIFQVADYGIVADLFKVVPEMTEILKKK 333
>sp|Q2KJE4|ETFA_BOVIN Electron transfer flavoprotein subunit alpha, mitochondrial OS=Bos
taurus GN=ETFA PE=2 SV=1
Length = 333
Score = 288 bits (737), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 160/333 (48%), Positives = 219/333 (65%), Gaps = 14/333 (4%)
Query: 21 SISRSISTLVLGEHENGSIKSQSLSAVEAAKSLSDDNSVSMLLAGSGPSFNEAVKHAASS 80
S+ R STLV+ EH N ++ +L+ + AAK L + VS L+AG+ + V
Sbjct: 15 SLLRFQSTLVIAEHANDTLAPITLNTITAAKHLGGE--VSCLVAGTK---CDKVAQDLCK 69
Query: 81 HPSISQVLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDV 140
+++VLVA D + + E L+ Q++ ++HI + + +FGKN+LPR AA LDV
Sbjct: 70 VAGVAKVLVAQHDAYKGLLPEELTPLILATQKQFNHTHICAGASAFGKNLLPRIAAKLDV 129
Query: 141 SPITDVIEISGSSQFVRPIYAGNALCTVRYTGANPCMLTVRATSFPMPKSSAESRSNGAS 200
+PI+D+I I FVR IYAGNA+CTV+ + +VR TSF +S S S+ +
Sbjct: 130 APISDIIAIKSPDTFVRTIYAGNAICTVK-CDEKVKVFSVRGTSFEAAAASGGSASSEKA 188
Query: 201 ISQVDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKMIEKLAEK 260
S +G S ++ ++RP+L A++VV+GGRGLKS ENFK++ LA++
Sbjct: 189 SST--------SPVGISEWLDQKLTKSDRPELTGAKVVVSGGRGLKSGENFKLLYDLADQ 240
Query: 261 LGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVN 320
L AAVGA+RA VDAGFV NDLQVGQTGKIVAPELY+A G+SGAIQHLAGM+DSK IVA+N
Sbjct: 241 LHAAVGASRAAVDAGFVTNDLQVGQTGKIVAPELYIAVGISGAIQHLAGMKDSKTIVAIN 300
Query: 321 KDADAPIFQVADYGLVGDLFEVIPELLEKFPEK 353
KD +APIFQVADYG+V DLF+V+PE+ E +K
Sbjct: 301 KDPEAPIFQVADYGIVADLFKVVPEMTELLKKK 333
>sp|Q54FD7|ETFA_DICDI Electron transfer flavoprotein subunit alpha, mitochondrial
OS=Dictyostelium discoideum GN=etfa PE=3 SV=1
Length = 355
Score = 285 bits (729), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 159/339 (46%), Positives = 225/339 (66%), Gaps = 22/339 (6%)
Query: 27 STLVLGEHENGSIKSQSLSAVEAAKSLSDDNSVSMLLAGS--GPSFNEAVKHAASSHPSI 84
+ LV+ EH+N + + +L+ + AA L N +S+L+AGS GP V + S +
Sbjct: 28 TCLVIAEHDNNQLLNSTLNTITAASKLGVTN-ISVLVAGSKCGP-----VADSVSKVSGV 81
Query: 85 SQVLVADSDKFAYPIAEPWAKLVHMIQ-----QREKYSHIISASGSFGKNVLPRAAALLD 139
+ V+ D + +AE ++ +Q + ++ +HI + + +FGKN LPR AALL+
Sbjct: 82 TNVVCVDHPTLEHSLAETITPIIVKLQSSSSKEGDEITHIFTPASNFGKNFLPRVAALLN 141
Query: 140 VSPITDVIEISGSSQFVRPIYAGNALCTVRYTGANPCML-TVRATSF-PMPKSSAESRSN 197
VS I+++ ++ + F RPIYAGNA+ TV+ T + C + TVR T+F P S ++
Sbjct: 142 VSQISEITKVKDAETFQRPIYAGNAIATVKST--DKCKVGTVRTTAFDKAPTSGGSAKVV 199
Query: 198 GASISQVDL--SALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKMIE 255
A+ V L A+ E +I ++ + +ERP+L SAR+VV+GGRG+K+ ENFKM+E
Sbjct: 200 SANDWAVPLIEKAISETNI---KWESSEVKKSERPELTSARVVVSGGRGMKNGENFKMLE 256
Query: 256 KLAEKLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKV 315
+LA+ LG AVGA+RA VD+GFV NDLQVGQTGKIVAPELY+A G+SGAIQHLAGM+DSKV
Sbjct: 257 ELADTLGGAVGASRAAVDSGFVSNDLQVGQTGKIVAPELYIAVGISGAIQHLAGMKDSKV 316
Query: 316 IVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKFPEKK 354
IVA+NKD +APIFQVAD GLVGDLF +P+L E + K
Sbjct: 317 IVAINKDPEAPIFQVADVGLVGDLFNEVPKLTESIKKSK 355
>sp|Q93615|ETFA_CAEEL Probable electron transfer flavoprotein subunit alpha,
mitochondrial OS=Caenorhabditis elegans GN=F27D4.1 PE=3
SV=2
Length = 332
Score = 282 bits (721), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 160/331 (48%), Positives = 213/331 (64%), Gaps = 18/331 (5%)
Query: 23 SRSISTLVLGEHENGSIKSQSLSAVEAAKSLSDDNSVSMLLAGSGPSFNEAVKHAASSHP 82
SR STLV+ EH+ + +L+A+ AA L N VS+L+ G+ + V +
Sbjct: 18 SRLNSTLVVAEHDETKLAPITLNAITAASKLG--NEVSVLVTGANAT---KVAEQVAKVN 72
Query: 83 SISQVLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSP 142
+ +VLVA +K + E A ++ Q++ ++ I + S +FG+ V+PR AA LDVS
Sbjct: 73 GVKRVLVAQDEKLKNNLPERVAPVILASQKQFNFTAITAGSSAFGRGVIPRVAAKLDVSS 132
Query: 143 ITDVIEISGSSQFVRPIYAGNALCTVRYTGANPCMLTVRATSF-PMPKSSAESRSNGASI 201
I+DV E+ + F R +YAGNA+ V+ T A +LT R TSF P + + + N S
Sbjct: 133 ISDVTEVHSADSFTRTLYAGNAVKKVKST-APIKLLTFRGTSFEPAKEGGSGAVENAPSA 191
Query: 202 S-QVDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKMIEKLAEK 260
+ DLS + KS ERPDL +A++VV+GGRGLKS +NFK+I LA+K
Sbjct: 192 DIKTDLSEFLGQELSKS----------ERPDLATAKVVVSGGRGLKSGDNFKLIYDLADK 241
Query: 261 LGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVN 320
LGA VGA+RA VDAG+VPND+QVGQTGKIVAPELY+A G+SGAIQHLAGM+DSKVIVA+N
Sbjct: 242 LGAGVGASRAAVDAGYVPNDMQVGQTGKIVAPELYIAIGISGAIQHLAGMKDSKVIVAIN 301
Query: 321 KDADAPIFQVADYGLVGDLFEVIPELLEKFP 351
KD DAPIFQVAD GL DLF+ +PEL P
Sbjct: 302 KDPDAPIFQVADIGLKADLFKAVPELTAALP 332
>sp|Q9HZP7|ETFA_PSEAE Electron transfer flavoprotein subunit alpha OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=etfA PE=3 SV=1
Length = 309
Score = 278 bits (710), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 158/321 (49%), Positives = 225/321 (70%), Gaps = 16/321 (4%)
Query: 26 ISTLVLGEHENGSIKSQSLSAVEAAKSLSDDNSVSMLLAGSGPSFNEAVKHAASSHPSIS 85
++ LV+ EH N ++ + +L+ V AAK++ D + +L+AG + AV AA+ +S
Sbjct: 1 MAILVIAEHNNAALAAATLNTVAAAKAIGGD--IHVLVAGQNVA---AVAEAAAKVEGVS 55
Query: 86 QVLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITD 145
+VLVAD+ +A+ + E A L+ + + YSH+++ + + GKN LPR AALLDV I++
Sbjct: 56 KVLVADNAAYAHQLPENVAPLIAELGKN--YSHVLAPATTNGKNFLPRVAALLDVDQISE 113
Query: 146 VIEISGSSQFVRPIYAGNALCTVRYTGANPCMLTVRATSFPMPKSSAESRSNGASISQVD 205
++E+ F RPIYAGNA+ TV+ + A ++TVR T F + + A++ QV
Sbjct: 114 IVEVVSPDTFKRPIYAGNAIATVQSSAAVK-VITVRTTGF----DAVAAEGGSAAVEQVS 168
Query: 206 LSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAV 265
A GKS +V ++RP+L +A+IVV+GGRG+++ +NFK++ LA+KLGAAV
Sbjct: 169 GPA----DAGKSAFVGEELAKSDRPELTAAKIVVSGGRGMQNGDNFKILYALADKLGAAV 224
Query: 266 GATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADA 325
GA+RA VDAGFVPND+QVGQTGKIVAP+LY+A G+SGAIQHLAGM+DSKVIVA+NKD +A
Sbjct: 225 GASRAAVDAGFVPNDMQVGQTGKIVAPQLYIAVGISGAIQHLAGMKDSKVIVAINKDEEA 284
Query: 326 PIFQVADYGLVGDLFEVIPEL 346
PIFQVADYGLV DLF+ +PEL
Sbjct: 285 PIFQVADYGLVADLFDAVPEL 305
>sp|P0CN60|ETFA_CRYNJ Probable electron transfer flavoprotein subunit alpha,
mitochondrial OS=Cryptococcus neoformans var. neoformans
serotype D (strain JEC21 / ATCC MYA-565) GN=ETF1 PE=3
SV=1
Length = 346
Score = 276 bits (706), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 157/335 (46%), Positives = 216/335 (64%), Gaps = 14/335 (4%)
Query: 23 SRSISTLVLGEHENGSIKSQSLSAVEAAKSLSDDNSVSMLLAGSGPSFNEAVKHAASSHP 82
SR +S+LV EH+ G + SLSAV AAK+L +D LL G+ E V
Sbjct: 22 SRLVSSLVFLEHKAGKLNEASLSAVTAAKTLGNDTH--GLLVGTKSEI-ENVLDRTKEIK 78
Query: 83 SISQVLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSP 142
+S++ +A SD +++ +AEP A L+ I + SHI +A + GKN+ PR A LLD S
Sbjct: 79 DLSKIYLATSDTYSHSLAEPLASLLASIASAKDVSHIFAAHTAVGKNIFPRLAGLLDTSL 138
Query: 143 ITDVIEISGS-SQFVRPIYAGNALCTVRYTGANPC-MLTVRATSFPMPKSSAESRSNGAS 200
I D+I + S F RPIYAGNA+ T++ + + ++TVR+T+F A + A+
Sbjct: 139 IADIIALESSGDTFTRPIYAGNAVLTIKSSPKDSVKVVTVRSTAF----DKAAVANGSAA 194
Query: 201 ISQVDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKMI-EKLAE 259
+ VD+ +D +++V + RPDL SA VV+GGR LKS E+F I + LA+
Sbjct: 195 VEDVDIITVDT----PTQFVSEELTVSSRPDLASAARVVSGGRALKSKESFDTILDPLAD 250
Query: 260 KLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAV 319
LGAAVGA+RA VDAG+ N LQVGQTGK+VAPELY+A G+SGAIQHLAGM++SK+I+A+
Sbjct: 251 SLGAAVGASRAAVDAGYADNSLQVGQTGKVVAPELYVAIGISGAIQHLAGMKESKMIIAI 310
Query: 320 NKDADAPIFQVADYGLVGDLFEVIPELLEKFPEKK 354
NKD DAPIFQVAD GLV DLFE +P+L+++ K
Sbjct: 311 NKDPDAPIFQVADVGLVADLFESVPQLVKEIDNVK 345
>sp|P0CN61|ETFA_CRYNB Probable electron transfer flavoprotein subunit alpha,
mitochondrial OS=Cryptococcus neoformans var. neoformans
serotype D (strain B-3501A) GN=ETF1 PE=3 SV=1
Length = 346
Score = 276 bits (706), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 157/335 (46%), Positives = 216/335 (64%), Gaps = 14/335 (4%)
Query: 23 SRSISTLVLGEHENGSIKSQSLSAVEAAKSLSDDNSVSMLLAGSGPSFNEAVKHAASSHP 82
SR +S+LV EH+ G + SLSAV AAK+L +D LL G+ E V
Sbjct: 22 SRLVSSLVFLEHKAGKLNEASLSAVTAAKTLGNDTH--GLLVGTKSEI-ENVLDRTKEIK 78
Query: 83 SISQVLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSP 142
+S++ +A SD +++ +AEP A L+ I + SHI +A + GKN+ PR A LLD S
Sbjct: 79 DLSKIYLATSDTYSHSLAEPLASLLASIASAKDVSHIFAAHTAVGKNIFPRLAGLLDTSL 138
Query: 143 ITDVIEISGS-SQFVRPIYAGNALCTVRYTGANPC-MLTVRATSFPMPKSSAESRSNGAS 200
I D+I + S F RPIYAGNA+ T++ + + ++TVR+T+F A + A+
Sbjct: 139 IADIIALESSGDTFTRPIYAGNAVLTIKSSPKDSVKVVTVRSTAF----DKAAVANGSAA 194
Query: 201 ISQVDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKMI-EKLAE 259
+ VD+ +D +++V + RPDL SA VV+GGR LKS E+F I + LA+
Sbjct: 195 VEDVDIITVDT----PTQFVSEELTVSSRPDLASAARVVSGGRALKSKESFDTILDPLAD 250
Query: 260 KLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAV 319
LGAAVGA+RA VDAG+ N LQVGQTGK+VAPELY+A G+SGAIQHLAGM++SK+I+A+
Sbjct: 251 SLGAAVGASRAAVDAGYADNSLQVGQTGKVVAPELYVAIGISGAIQHLAGMKESKMIIAI 310
Query: 320 NKDADAPIFQVADYGLVGDLFEVIPELLEKFPEKK 354
NKD DAPIFQVAD GLV DLFE +P+L+++ K
Sbjct: 311 NKDPDAPIFQVADVGLVADLFESVPQLVKEIDNVK 345
>sp|Q5Y223|ETFA_CRYGW Probable electron transfer flavoprotein subunit alpha,
mitochondrial OS=Cryptococcus gattii serotype B (strain
WM276 / ATCC MYA-4071) GN=ETF1 PE=3 SV=1
Length = 346
Score = 259 bits (663), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 157/335 (46%), Positives = 216/335 (64%), Gaps = 14/335 (4%)
Query: 23 SRSISTLVLGEHENGSIKSQSLSAVEAAKSLSDDNSVSMLLAGSGPSFNEAVKHAASSHP 82
SR +S+LV EH+ G + SLSAV AAK+L +D LL G+ A+ A
Sbjct: 22 SRLVSSLVFLEHKAGKLSEASLSAVTAAKTLGNDTH--GLLVGTKSEIENALDRA-KEIK 78
Query: 83 SISQVLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSP 142
+S++ +A SD +++ +AE A L+ I + SH+ +A + GKNV PR A LLD S
Sbjct: 79 GLSKIYLARSDSYSHSLAEALASLLASIVSAKDVSHLFAAHTAVGKNVFPRLAGLLDSSL 138
Query: 143 ITDVIEISGSSQ-FVRPIYAGNALCTVRYTGANPC-MLTVRATSFPMPKSSAESRSNGAS 200
I D+I + S F RPIYAGNA+ T++ + + ++TVR+T+F +A S A
Sbjct: 139 IADIIALESSGDTFTRPIYAGNAVLTIKSSPKDSVKIVTVRSTAFDKAPVAAGS----AV 194
Query: 201 ISQVDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFK-MIEKLAE 259
I VD+ +D +++V + RPDL SA VV+GGR LKS E+F ++ LA+
Sbjct: 195 IEDVDIITVDT----PTQFVSEELTVSSRPDLASAARVVSGGRALKSKESFDAILNPLAD 250
Query: 260 KLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAV 319
LGAAVGA+RA VDAG+ N LQVGQTGK+VAPELY+A G+SGAIQHLAGM++SK+I+A+
Sbjct: 251 SLGAAVGASRAAVDAGYADNSLQVGQTGKVVAPELYVAIGISGAIQHLAGMKESKMIIAI 310
Query: 320 NKDADAPIFQVADYGLVGDLFEVIPELLEKFPEKK 354
NKD DAPIFQVAD GLV DLFE +P+L+++ K
Sbjct: 311 NKDPDAPIFQVADVGLVADLFESVPQLVKELGNVK 345
>sp|Q8J112|ETFA_CRYNV Probable electron transfer flavoprotein subunit alpha,
mitochondrial OS=Cryptococcus neoformans var. grubii
GN=ETF1 PE=3 SV=1
Length = 346
Score = 257 bits (656), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 158/352 (44%), Positives = 223/352 (63%), Gaps = 18/352 (5%)
Query: 6 ILWALSKRPRCFHRPSI----SRSISTLVLGEHENGSIKSQSLSAVEAAKSLSDDNSVSM 61
+L+ + R C P + SR S+LVL EH+ G + SLSAV AAK+ +D
Sbjct: 1 MLYRSALRASCGFTPRLASTRSRLASSLVLLEHKAGRLNDASLSAVTAAKATGNDTH--G 58
Query: 62 LLAGSGPSFNEAVKHAASSHPSISQVLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIIS 121
+L GS E V A +S++ +A SD +++ +AE A L+ I + SH+ +
Sbjct: 59 ILVGSMAEV-EGVLKEAKKIKDLSKIYLATSDAYSHSLAEALAPLLASIVPTKDVSHVFA 117
Query: 122 ASGSFGKNVLPRAAALLDVSPITDVIEISGS-SQFVRPIYAGNALCTVRYTGANPC-MLT 179
A + GKNV PR A +LD S + D+I + S F RPIYAGNA+ TV+ + + ++T
Sbjct: 118 AHTAVGKNVFPRLAGMLDSSLVADIIALDPSRGTFTRPIYAGNAVLTVKSSPKDSVKIVT 177
Query: 180 VRATSFPMPKSSAESRSNGASISQVDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVV 239
VR+T+F A A + V++ A++ ++++ + RPDL SA VV
Sbjct: 178 VRSTAF----DKAAIADGSADVEDVEILAIES----PTQFISEELTVSSRPDLASAARVV 229
Query: 240 TGGRGLKSAENF-KMIEKLAEKLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAF 298
+GGR LKS E+F K+++ LA+ LGAAVGA+RA VDAG+ N LQVGQTGK+VAPELY+A
Sbjct: 230 SGGRALKSKESFDKILDPLADSLGAAVGASRAAVDAGYADNSLQVGQTGKVVAPELYVAV 289
Query: 299 GVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKF 350
G+SGAIQHLAGM++SK+IVA+NKD DAPIFQVAD GLV DLFE +P+L+++
Sbjct: 290 GISGAIQHLAGMKESKMIVAINKDPDAPIFQVADVGLVADLFESVPQLVQEI 341
>sp|P53573|ETFA_BRAJA Electron transfer flavoprotein subunit alpha OS=Bradyrhizobium
japonicum (strain USDA 110) GN=etfA PE=3 SV=2
Length = 314
Score = 256 bits (655), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 151/322 (46%), Positives = 211/322 (65%), Gaps = 18/322 (5%)
Query: 26 ISTLVLGEHENGSIKSQSLSAVEAAKSLSDDNSVSMLLAGSGPSFNEAVKHAASSHPSIS 85
++TL++ EH+N S+K + A+ AA +L D V + +A AA+ +
Sbjct: 1 MTTLLIAEHDNASLKDATNKALTAAAALGADVEVLVAG-----EGAKAAADAAAKLAGVK 55
Query: 86 QVLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITD 145
+VL+AD +A+ +AEP A L+ + Y I++ + S KNV+PR AALLDV +++
Sbjct: 56 KVLLADGALYAHDLAEPLAALI--VSLAPSYDAIVAPATSRFKNVMPRVAALLDVMQVSE 113
Query: 146 VIEISGSSQFVRPIYAGNALCTVRYTGANPCMLTVRATSFPMPKSSAESRSNGASISQVD 205
+I++ + RPIYAGNA+ TV+ A ++TVR ++F +A A + V
Sbjct: 114 IIKVVAPDTYERPIYAGNAIQTVKSKDAKK-VITVRTSTF-----AAAGEGGSAPVESVQ 167
Query: 206 LSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENF-KMIEKLAEKLGAA 264
+A G S +V ++RP+L SA+I+V+GGR ++S ENF K IE LA+KLGA
Sbjct: 168 AAA----DPGLSSFVGEEVAKSDRPELTSAKIIVSGGRAMQSRENFAKYIEPLADKLGAG 223
Query: 265 VGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDAD 324
VGA+RA VDAG+ PND QVGQTGK+VAPELY+A G+SGAIQHLAGM+DSKVIVA+NKD D
Sbjct: 224 VGASRAAVDAGYAPNDWQVGQTGKVVAPELYVAVGISGAIQHLAGMKDSKVIVAINKDED 283
Query: 325 APIFQVADYGLVGDLFEVIPEL 346
APIFQVADYGLV DL++ +PEL
Sbjct: 284 APIFQVADYGLVADLYQAVPEL 305
>sp|P38974|ETFA_PARDE Electron transfer flavoprotein subunit alpha OS=Paracoccus
denitrificans GN=etfA PE=1 SV=2
Length = 308
Score = 256 bits (654), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 139/267 (52%), Positives = 184/267 (68%), Gaps = 12/267 (4%)
Query: 84 ISQVLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPI 143
+++VLVA+ + + +AEP A L+ + YSHI + + + KNV+PR AALLDV +
Sbjct: 54 VAKVLVAEDALYGHRLAEPTAALI--VGLAGDYSHIAAPATTDAKNVMPRVAALLDVMVL 111
Query: 144 TDVIEISGSSQFVRPIYAGNALCTVRYTGANPCMLTVRATSFPMPKSSAESRSNGASISQ 203
+DV I + F RPIYAGNA+ V+ A + T+R SF A A +++
Sbjct: 112 SDVSAILDADTFERPIYAGNAIQVVKSKDAKK-VFTIRTASF-----DAAGEGGTAPVTE 165
Query: 204 VDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKMIEKLAEKLGA 263
+A G S +V +++RP+L SAR VV+GGRGL S E+F +IE+LA+KLGA
Sbjct: 166 TAAAA----DPGLSSWVADEVAESDRPELTSARRVVSGGRGLGSKESFAIIEELADKLGA 221
Query: 264 AVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDA 323
AVGA+RA VD+G+ PND QVGQTGK+VAPELY+A G+SGAIQHLAGM+DSKVIVA+NKD
Sbjct: 222 AVGASRAAVDSGYAPNDWQVGQTGKVVAPELYVAVGISGAIQHLAGMKDSKVIVAINKDE 281
Query: 324 DAPIFQVADYGLVGDLFEVIPELLEKF 350
+APIFQ+ADYGLVGDLF V+PEL K
Sbjct: 282 EAPIFQIADYGLVGDLFSVVPELTGKL 308
>sp|P78790|ETFA_SCHPO Probable electron transfer flavoprotein subunit alpha,
mitochondrial OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPAC27D7.06 PE=2 SV=3
Length = 341
Score = 243 bits (619), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 142/326 (43%), Positives = 199/326 (61%), Gaps = 15/326 (4%)
Query: 27 STLVLGEHENGSIKSQSLSAVEAAKSLSDDNSVSMLLAGSGPSFNEAVKHAASSHPSISQ 86
S L L EH+ G++ SLSAVEAAK D V + G S + + A S + +
Sbjct: 29 SVLTLLEHQGGNLSPASLSAVEAAKRTGGD--VFGFVIGKDSS--QISQKVAKSVNDLKK 84
Query: 87 VLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDV 146
V+ ++ + + I + A ++ ++ + SH+ SA + GK V+PR AA+ DV I+D+
Sbjct: 85 VIYVENPSYEHNIPDQIANVLFENVKKNEISHVFSAHSTVGKGVMPRLAAMFDVMQISDI 144
Query: 147 IEISGSSQFVRPIYAGNALCTVRYTGANPC-MLTVRATSFPMPKSSAESRSNGASISQVD 205
I + + FVRP YAGN TV + +P ++TVRA++F SS E GA+
Sbjct: 145 IGVVSADTFVRPTYAGNVNVTV--STKDPIKIVTVRASAFDAAPSSGE----GAATV--- 195
Query: 206 LSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENF-KMIEKLAEKLGAA 264
+ +D +V RPDL SA VV GGR LK E F +++ LA+KLGAA
Sbjct: 196 VEGIDPKPAALQEWVSENIIKNARPDLSSAERVVAGGRPLKDKETFERILTPLADKLGAA 255
Query: 265 VGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDAD 324
+GATR VD+G+ N LQ+GQTGKI+AP+LY+A G+ GAIQHLAG++DSKVI A+N+D +
Sbjct: 256 IGATRVAVDSGYADNSLQIGQTGKIIAPKLYIAVGIDGAIQHLAGIKDSKVIAAINRDEN 315
Query: 325 APIFQVADYGLVGDLFEVIPELLEKF 350
APIFQ AD G+VGDLFE++PEL EK
Sbjct: 316 APIFQTADVGIVGDLFEIVPELTEKL 341
>sp|Q12480|ETFA_YEAST Probable electron transfer flavoprotein subunit alpha,
mitochondrial OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=AIM45 PE=1 SV=1
Length = 344
Score = 239 bits (611), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 145/336 (43%), Positives = 203/336 (60%), Gaps = 23/336 (6%)
Query: 27 STLVLGEH-ENGSIKSQSLSAVEAAKSLSDDNSVSMLLAGSGPSFNEAVKHAASSHPSIS 85
STL E ++GS+ SLS + AA+ LS N ++ ++ GS ++ S ++
Sbjct: 24 STLAFIESSKDGSVSRSSLSLLAAAQKLS--NPITAVITGSKAEKTAEALKSSYSCSNLE 81
Query: 86 QVLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITD 145
++++ + K + E L+ + + YSH + ++ S GK+VLPR ALLDV P+ +
Sbjct: 82 KLVIFEDSKLDTCLPEQLTPLLVKLLKGGDYSHFVVSNSSVGKSVLPRVGALLDVQPVCE 141
Query: 146 VIEISGSSQFVRPIYAGNALCTVRYTGANPCMLTVRATSFP------MPKSSAESRSNGA 199
V I F+RPIYAGN + T+ A +L +RA++FP M + E R++
Sbjct: 142 VTVIKDPKTFIRPIYAGNIISTIE-CQAEKKLLIIRASAFPPIAEGSMDSVTIEKRTD-- 198
Query: 200 SISQVDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENF-KMIEKLA 258
I DL+ +VK +ERP+L SA+ VVTGGR LK E F K++ LA
Sbjct: 199 -IPPCDLNV---------TWVKTILTKSERPELTSAQNVVTGGRALKDKETFEKLLSPLA 248
Query: 259 EKLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVA 318
+ L AA+GATRA VD G N LQ+GQTGK+VAP LY+A GVSGA+QHLAGM+DSKVIVA
Sbjct: 249 DVLHAAIGATRASVDNGLCDNSLQIGQTGKVVAPNLYIAIGVSGAVQHLAGMKDSKVIVA 308
Query: 319 VNKDADAPIFQVADYGLVGDLFEVIPELLEKFPEKK 354
+N D DAPIF VADYGL GDL++++PEL EK + K
Sbjct: 309 INNDPDAPIFNVADYGLQGDLYKIVPELTEKLGKYK 344
>sp|P94551|ETFA_BACSU Electron transfer flavoprotein subunit alpha OS=Bacillus subtilis
(strain 168) GN=etfA PE=3 SV=1
Length = 325
Score = 221 bits (564), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 132/330 (40%), Positives = 200/330 (60%), Gaps = 21/330 (6%)
Query: 29 LVLGEHENGSIKSQSLSAVEAAKSLSDDNSVSMLLAGSGPSFNEAVKHAASS--HPSISQ 86
+VLGE +G +++ + A+ A +++S D V +L G E V+ A H +
Sbjct: 6 IVLGEIRDGELRNVTFEAIAAGRTISGDGEVIGVLIG------ENVQSIAQELIHYGADK 59
Query: 87 VLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDV 146
VL A+ K A+ +++++ + ++E +I + GK++ P+ AA L I+D
Sbjct: 60 VLTAEDPKLKTYTADGYSQVMRGVIEQENPDSVIFGHTAMGKDLSPKLAARLQTGLISDA 119
Query: 147 IEIS---GSSQFVRPIYAGNALCTVRYTGANPCML-TVRATSFPMPKSSAESRSNGASIS 202
I++S G+ F RPIY+G A R +P + T+R + ++S + S SI
Sbjct: 120 IDVSVTGGNVVFTRPIYSGKAF--ERVISTDPMIFATIRPNNI---QASEKDTSRSGSIE 174
Query: 203 QVDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKMIEKLAEKLG 262
+D+S D ++ VK T A+ DL A+I+V GGRG+KS E F+ +++LAE LG
Sbjct: 175 SIDVSLTDLRTV-IQEVVKKT---ADGVDLSEAKIIVAGGRGVKSKEGFQPLQELAEVLG 230
Query: 263 AAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKD 322
AAVGA+R DA + LQ+GQTGK+V P+LY+A G+SGAIQHLAGM +SKVIVA+NKD
Sbjct: 231 AAVGASRGACDADYCDYALQIGQTGKVVTPDLYIACGISGAIQHLAGMSNSKVIVAINKD 290
Query: 323 ADAPIFQVADYGLVGDLFEVIPELLEKFPE 352
+A IF++ADYG+VGDLFEV+P L E+F +
Sbjct: 291 PEADIFKIADYGIVGDLFEVVPLLTEEFKQ 320
>sp|O53275|ETFA_MYCTU Electron transfer flavoprotein subunit alpha OS=Mycobacterium
tuberculosis GN=etfA PE=3 SV=1
Length = 318
Score = 205 bits (522), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 124/327 (37%), Positives = 191/327 (58%), Gaps = 15/327 (4%)
Query: 29 LVLGEHENGSIKSQSLSAVEAAKSLSDDNSVSMLLAGSGPSFNEAVKHAASSHPSISQVL 88
LVL EH G++K S + AA++L + +V + + G+ + +K A ++ ++
Sbjct: 5 LVLVEHAEGALKKVSAELITAARALGEPAAVVVGVPGTAAPLVDGLKAAGAA-----KIY 59
Query: 89 VADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDVIE 148
VA+SD + P ++ + + + ++ A+ + GK + R AA + + DV++
Sbjct: 60 VAESDLVDKYLITPAVDVLAGLAESSAPAGVLIAATADGKEIAGRLAARIGSGLLVDVVD 119
Query: 149 ISGSSQFVRPIYAGNALCTVRYTGANPCMLTVRATSFPMPKSSAESRSNGASISQVDLSA 208
+ V I+ G + G P ++TVRA + AE + V++ A
Sbjct: 120 VREGGVGVHSIFGGAFTVEAQANGDTP-VITVRAGAV-----EAEPAAGAGEQVSVEVPA 173
Query: 209 LDEDSIGKSRYV-KHTSQDAERPDLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGA 267
E++ +R + + +RP+L A IVV GGRG+ SAENF ++E LA+ LGAAVGA
Sbjct: 174 AAENA---ARITAREPAVAGDRPELTEATIVVAGGRGVGSAENFSVVEALADSLGAAVGA 230
Query: 268 TRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPI 327
+RA VD+G+ P QVGQTGK V+P+LY+A G+SGAIQH AGM+ SK IVAVNKD +API
Sbjct: 231 SRAAVDSGYYPGQFQVGQTGKTVSPQLYIALGISGAIQHRAGMQTSKTIVAVNKDEEAPI 290
Query: 328 FQVADYGLVGDLFEVIPELLEKFPEKK 354
F++ADYG+VGDLF+V P+L E +K
Sbjct: 291 FEIADYGVVGDLFKVAPQLTEAIKARK 317
>sp|P53578|FIXB_CLOSA Protein FixB OS=Clostridium saccharobutylicum GN=fixB PE=3 SV=1
Length = 334
Score = 179 bits (455), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 174/331 (52%), Gaps = 20/331 (6%)
Query: 30 VLGEHENGSIKSQSLSAVEAAKSLSDDNSV---SMLLAGSGPSFNEAVKHAASSHPSISQ 86
V E G ++ SL + + ++D V ++LL + + +H A +
Sbjct: 11 VFAEQREGELQKVSLELLGEGRRVADKLGVKLTALLLGSNVEGIKDLAEHGAD------E 64
Query: 87 VLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDV 146
VLVAD+ + + + K++ + K + + G+++ PR AA L+ D
Sbjct: 65 VLVADNKDLQHYTTDAYTKVICDLANERKPGILFVGATFIGRDLGPRVAARLNTGLTADC 124
Query: 147 IEI-----SGSSQFVRPIYAGNALCTVRYTGANPCMLTVRATSFPMPKSSAESRSNGASI 201
I +G RP + GN + T+ P M TVR F + + +
Sbjct: 125 TSIDVEVENGDLLATRPAFGGNLMATIACPEHRPQMATVRPGVFEKVNTDGAN----CKV 180
Query: 202 SQVDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKMIEKLAEKL 261
+V++ + D K + + +D D+ A+I+V GGRG+ S ENF+++ +LA+ L
Sbjct: 181 EKVEVKLTNNDLRTKVLEIIKSKKDI--VDISEAKIIVAGGRGVGSKENFELLGELAKVL 238
Query: 262 GAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNK 321
G V +RA V+ G++ N QVGQTGK V P +Y+A G+SGAIQH+AGM+DS +I+A+NK
Sbjct: 239 GGTVAGSRAAVEKGWIENAYQVGQTGKTVKPSIYIACGISGAIQHVAGMQDSDMIIAINK 298
Query: 322 DADAPIFQVADYGLVGDLFEVIPELLEKFPE 352
D API +VADYG+VGD+ V+PEL+ + E
Sbjct: 299 DETAPIMKVADYGIVGDVKNVLPELIAQAKE 329
>sp|O33096|ETFA_MYCLE Electron transfer flavoprotein subunit alpha OS=Mycobacterium
leprae (strain TN) GN=etfA PE=3 SV=1
Length = 318
Score = 175 bits (443), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 118/326 (36%), Positives = 191/326 (58%), Gaps = 13/326 (3%)
Query: 29 LVLGEHENGSIKSQSLSAVEAAKSLSDDNSVSMLLAGSGPSFNEAVKHAASSHPSISQVL 88
LVL EH G++K S + AA+ L + +V + G+ + +K A ++ ++
Sbjct: 5 LVLVEHTEGALKKVSAELITAARVLGEPAAVVVGTPGTSAPLVDGLKTAGAA-----KIY 59
Query: 89 VADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDVIE 148
VA+SD + P ++ + + + ++ A+ + GK + R AA + + DV++
Sbjct: 60 VAESDAADKYLITPVVDVLAALAESSAPAAVLLAATADGKEIGGRLAARIGSGLLVDVVD 119
Query: 149 ISGSSQFVRPIYAGNALCTVRYTGANPCMLTVRATSFPMPKSSAESRSNGASISQVDLSA 208
+ + V ++ G + + G P ++TVRA + + + G +S V++ A
Sbjct: 120 VREGAVGVHSVFGGVFIVEAQANGDTP-VITVRAGAV----EAQPAEGAGEQVS-VEVPA 173
Query: 209 LDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGAT 268
E++ + + RPDL A +VV+GGRG+ SA+NF ++E LA+ LGAAVGA+
Sbjct: 174 PAENATKITARAPAVVDN--RPDLTEATVVVSGGRGVGSADNFSVVEALADSLGAAVGAS 231
Query: 269 RAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIF 328
RA VD+G+ P Q+GQTGK V+P+LY+A G+SGAIQH AGM+ SK IVAVNKD +APIF
Sbjct: 232 RAAVDSGYYPGQFQIGQTGKTVSPQLYIALGISGAIQHRAGMQTSKTIVAVNKDEEAPIF 291
Query: 329 QVADYGLVGDLFEVIPELLEKFPEKK 354
++AD+G+VGDLF+V P+L + +K
Sbjct: 292 EIADFGVVGDLFKVAPQLTDGIKARK 317
>sp|P52039|ETFA_CLOAB Electron transfer flavoprotein subunit alpha OS=Clostridium
acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 /
LMG 5710 / VKM B-1787) GN=etfA PE=3 SV=2
Length = 336
Score = 174 bits (442), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 112/325 (34%), Positives = 179/325 (55%), Gaps = 14/325 (4%)
Query: 30 VLGEHENGSIKSQSLSAVEAAKSLSDDNSVSMLLAGSGPSFNEAVKHAASSHPSISQVLV 89
V E +G ++ SL + K +++ V + G + E + SH + +VL
Sbjct: 11 VFAEQRDGELQKVSLELLGKGKEMAEKLGVELTAVLLGHN-TEKMSKDLLSHGA-DKVLA 68
Query: 90 ADSDKFAYPIAEPWAKLV-HMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDV-- 146
AD++ A+ + +AK++ ++ +R+ I A+ G+++ PR AA L D
Sbjct: 69 ADNELLAHFSTDGYAKVICDLVNERKPEILFIGAT-FIGRDLGPRIAARLSTGLTADCTS 127
Query: 147 --IEISGSSQF-VRPIYAGNALCTVRYTGANPCMLTVRATSF-PMPKSSAESRSNGASIS 202
I++ RP + GN + T+ + P M TVR F +P + A +
Sbjct: 128 LDIDVENRDLLATRPAFGGNLIATIVCSDHRPQMATVRPGVFEKLPVNDANVSDDKIEKV 187
Query: 203 QVDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKMIEKLAEKLG 262
+ L+A D +++ K + D+G A+++V GGRG+ S ENF+ +E+LA LG
Sbjct: 188 AIKLTASDI----RTKVSKVVKLAKDIADIGEAKVLVAGGRGVGSKENFEKLEELASLLG 243
Query: 263 AAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKD 322
+ A+RA ++ +V DLQVGQTGK V P LY+A G+SGAIQHLAGM+DS I+A+NKD
Sbjct: 244 GTIAASRAAIEKEWVDKDLQVGQTGKTVRPTLYIACGISGAIQHLAGMQDSDYIIAINKD 303
Query: 323 ADAPIFQVADYGLVGDLFEVIPELL 347
+API +VAD +VGD+ +V+PEL+
Sbjct: 304 VEAPIMKVADLAIVGDVNKVVPELI 328
>sp|P71153|ETFA_THETC Electron transfer flavoprotein subunit alpha
OS=Thermoanaerobacterium thermosaccharolyticum (strain
ATCC 7956 / DSM 571 / NCIB 9385 / NCA 3814) GN=etfA PE=3
SV=2
Length = 330
Score = 167 bits (422), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 116/329 (35%), Positives = 183/329 (55%), Gaps = 11/329 (3%)
Query: 30 VLGEHENGSIKSQSLSAVEAAKSLSDDNSVSMLLAGSGPSFNEAVKHAASSHPSISQVLV 89
+ E NG + + ++ + A+ L+D V++ G + K S I V V
Sbjct: 9 IFAEQRNGKLMNVAIEILGEARKLADKKGVNVGAVLIGHNVENLSKDLISFGADI--VYV 66
Query: 90 ADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDV--- 146
D+ + E +AK + + + K I+ + G+++ PR A+ L D
Sbjct: 67 VDNPLLSNYTTEGYAKAISELAKEYKPEVILYGATFIGRDLAPRIASRLMTGLTADCTGL 126
Query: 147 -IEISGSSQFVRPIYAGNALCTVRYTGANPCMLTVRATSFPMPKSSAESRSNGASISQVD 205
I+ +G RP + GN + T++ P M TVR M ++ + +G I + D
Sbjct: 127 DIDENGLLLQTRPAFGGNLMATIKCPDKRPQMSTVRPGV--MKRAIRDDTRDGKVI-KFD 183
Query: 206 LSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAV 265
+ ++E I +++ + + +L A I+V+GGRG+ + F +I++LA+ LG V
Sbjct: 184 -ADINESDI-RTKILSIAKEAKNVVNLEEADIIVSGGRGIGGPDGFNIIKELADVLGGVV 241
Query: 266 GATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADA 325
GA+RA VDAG++ +D QVGQTGK V P+LY+A G+SGAIQHLAGM +S IVA+NK+ DA
Sbjct: 242 GASRATVDAGWITSDHQVGQTGKTVRPKLYIACGISGAIQHLAGMSNSGTIVAINKNPDA 301
Query: 326 PIFQVADYGLVGDLFEVIPELLEKFPEKK 354
PIF+ ADYG+VGDLF+VIP L+E+ + K
Sbjct: 302 PIFKFADYGIVGDLFKVIPVLIEEIKKLK 330
>sp|O85692|ETFA_MEGEL Electron transfer flavoprotein subunit alpha OS=Megasphaera
elsdenii GN=etfA PE=3 SV=1
Length = 338
Score = 164 bits (415), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 111/340 (32%), Positives = 172/340 (50%), Gaps = 30/340 (8%)
Query: 30 VLGEHENGSIKSQSLSAVEAAKSLSDD--NSVSMLLAGSG--PSFNEAVKHAASSHPSIS 85
V+ E G ++ S + A+ L+D + V +L G P E + H A
Sbjct: 11 VIAEQFEGKLRDVSFELLGQARILADTIGDEVGAILIGKDVKPLAQELIAHGAH------ 64
Query: 86 QVLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITD 145
+V V D + + +AK++ EK + + + + G+++ PR A L D
Sbjct: 65 KVYVYDDPQLEHYNTTAYAKVICDFFHEEKPNVFLVGATNIGRDLGPRVANSLKTGLTAD 124
Query: 146 VIEISGSSQ-----FVRPIYAGNALCTVRYTGANPCMLTVRATSFPMPKS----SAESRS 196
++ + RP GN + + P M TVR F P++ + E
Sbjct: 125 CTQLGVDDDKKTIVWTRPALGGNIMAEIICPDNRPQMGTVRPHVFKKPEADPSATGEVIE 184
Query: 197 NGASISQVDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFK--MI 254
A++S D +++V+ E + A ++V GGRG+ S E FK ++
Sbjct: 185 KKANLSDADFM---------TKFVELIKLGGEGVKIEDADVIVAGGRGMNSEEPFKTGIL 235
Query: 255 EKLAEKLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSK 314
++ A+ LG AVGA+RA VDAG++ QVGQTGK V P++Y+A +SGAIQ LAGM S
Sbjct: 236 KECADVLGGAVGASRAAVDAGWIDALHQVGQTGKTVGPKIYIACAISGAIQPLAGMTGSD 295
Query: 315 VIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKFPEKK 354
I+A+NKD DAPIF+V DYG+VGD+F+V+P L E ++K
Sbjct: 296 CIIAINKDEDAPIFKVCDYGIVGDVFKVLPLLTEAIKKQK 335
>sp|P26483|FIXB_AZOC5 Protein FixB OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM
5975 / ORS 571) GN=fixB PE=3 SV=2
Length = 369
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/328 (33%), Positives = 168/328 (51%), Gaps = 13/328 (3%)
Query: 30 VLGEHENGSIKSQSLSAVEAAKSLSDDNSVSMLLAGSGPSFNEAVKHAAS---SHPSISQ 86
V E E G + S + A + L+D V + GP +EA +HAA+ S+ +
Sbjct: 34 VFIEQERGQVHPVSWELMGAGRKLADKLKVELAAIVLGPD-DEATQHAAAEAFSYGADLT 92
Query: 87 VLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDV 146
+VAD Y E + K + + K ++ + + G+++ A L D
Sbjct: 93 YVVADPLLTDYR-NEAYTKALTDVVNTYKPEILLLGATTLGRDLAGSVATTLLTGLTADC 151
Query: 147 IEIS----GSSQFVRPIYAGNALCTVRYTGANPCMLTVRATSFPMPKSSAESRSNGASIS 202
E+ GS RP + G+ LCT+ P M TVR PMP+ E + G I+
Sbjct: 152 TELDVDADGSLAATRPTFGGSLLCTIYTLNYRPQMATVRPRVMPMPER--EEKPIGRIIT 209
Query: 203 QVDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKMIEKLAEKLG 262
L +++D + K +D+ + +L A +VV GG GL S ENF+++ +LA LG
Sbjct: 210 H-PLGMVEDDIVTKILSFL-PDRDSAKSNLAYADVVVAGGLGLGSPENFQLVRQLAGVLG 267
Query: 263 AAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKD 322
A G +R +V G+V +D Q+GQTGK + P+LY+A G+SGAIQH G+ + +IVA+N D
Sbjct: 268 AEYGCSRPLVQKGWVTSDRQIGQTGKTIRPKLYIAAGISGAIQHRVGVEGADMIVAINTD 327
Query: 323 ADAPIFQVADYGLVGDLFEVIPELLEKF 350
+APIF A G+V D ++P L E F
Sbjct: 328 KNAPIFDFAHVGIVTDAIRLLPALTEAF 355
>sp|P53574|FIXB_AZOVI Protein FixB OS=Azotobacter vinelandii GN=fixB PE=3 SV=1
Length = 360
Score = 152 bits (383), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/286 (34%), Positives = 152/286 (53%), Gaps = 19/286 (6%)
Query: 72 EAVKHAASSHPSISQVLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGKNVL 131
E V+H A + ++ D EP+ K + + + ++ + + G+++
Sbjct: 76 EPVQHGADKAYLLQHEILRDYRN------EPYTKALTDLVTATQPEILMLGATTLGRDLA 129
Query: 132 PRAAALLDVSPITDVIEISGSSQF-----VRPIYAGNALCTVRYTGAN-PCMLTVRATSF 185
A L + D E+ ++ RP + G+ LC + P M TVR
Sbjct: 130 GSVATTLGTGLVADCTELVIDTETRNLASTRPTFDGSLLCKPSSAQRHRPQMATVRP-RM 188
Query: 186 PMPKSSAESRSNGASISQVDLSALDEDSIGKS-RYVKHTSQDAERPDLGSARIVVTGGRG 244
MP+ A S I +V S ++ D I K ++ ++D +P+L A I+V GGRG
Sbjct: 189 AMPEPDA---SRSGEIIEVPFSMIETDIITKVLEFIPDDTRD--KPNLPFADIIVAGGRG 243
Query: 245 LKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAI 304
L++ ENF+++ LA+ LGA VGA+R +V AG+ D QVGQ+GK V P+LY+A G+SGAI
Sbjct: 244 LRNQENFQLVWDLAKVLGAEVGASRPIVQAGWAELDRQVGQSGKTVRPKLYIAAGISGAI 303
Query: 305 QHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKF 350
QH GM + VI+A+N D +APIF A YG+VG+ V+P L E F
Sbjct: 304 QHRVGMDGADVIIAINTDPNAPIFDFAHYGIVGNAITVLPALTEAF 349
>sp|P09819|FIXB_RHIME Protein FixB OS=Rhizobium meliloti (strain 1021) GN=fixB PE=3 SV=1
Length = 353
Score = 149 bits (375), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 163/330 (49%), Gaps = 10/330 (3%)
Query: 30 VLGEHENGSIKSQSLSAVEAAKSLSDDNSVSMLLAGSGPSFNEAVKHAASSHPSISQVL- 88
V E E+G + S+ + + L+D V + GP + +A + + L
Sbjct: 17 VFIELEHGQVHPVSIELLGEGRKLADKLGVHLAGVVIGPPGGQGTANAIADAFAYGADLS 76
Query: 89 -VADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDVI 147
+ +S A+ EP+ K + + K ++ + + G+++ A L D
Sbjct: 77 YLVESPLLAHYRNEPFTKALTDLVLANKPEILLLGATTLGRDLAGSVATTLKTGLTADCT 136
Query: 148 EIS----GSSQFVRPIYAGNALCTVRYTGANPCMLTVRATSFPMPKSSAESRSNGASISQ 203
E++ GS RP + G+ LCT+ P M TVR + P+ +R G SI +
Sbjct: 137 ELNVDSDGSLAATRPTFGGSLLCTIYTLKCRPQMATVRPSVMATPQRV--NRPTG-SIIR 193
Query: 204 VDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKMIEKLAEKLGA 263
DL L+E+ I + D+ +L A +VV GG GL + +N ++++ LA LG
Sbjct: 194 HDLKMLEEE-IATKVLAFFSDCDSTIANLAYADVVVAGGLGLGAVQNLQLLKDLARTLGG 252
Query: 264 AVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDA 323
G +R +V G++P D Q+GQTG + P+LY+A G+SGA+QH G+ S +IVA+N D
Sbjct: 253 DFGCSRPLVQKGWMPFDRQIGQTGNTIRPKLYIAAGISGAVQHRVGVEGSDLIVAINTDP 312
Query: 324 DAPIFQVADYGLVGDLFEVIPELLEKFPEK 353
+APIF A G+V D +P L E F ++
Sbjct: 313 NAPIFDFAHLGVVADAISFLPALTEVFTKR 342
>sp|P10449|FIXB_BRAJA Protein FixB OS=Bradyrhizobium japonicum (strain USDA 110) GN=fixB
PE=3 SV=2
Length = 369
Score = 148 bits (373), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 105/327 (32%), Positives = 158/327 (48%), Gaps = 11/327 (3%)
Query: 30 VLGEHENGSIKSQSLSAVEAAKSLSDDNSVSMLLAGSGPSFNEAVKHA--ASSHPSISQV 87
V E E G + S + + L+D V++ GP A A + +
Sbjct: 34 VFVELERGQVHPVSWELMGTGRGLADRLKVNLAAVVVGPEGQHTRNAALEAFCYGADLAY 93
Query: 88 LVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDV- 146
LV+D+ Y E + K + + K ++ + + G+++ A L D
Sbjct: 94 LVSDNVLSDYR-NESYTKALTELVNTYKPEILLLGATTLGRDLAGSVATNLSTGLTADCT 152
Query: 147 ---IEISGSSQFVRPIYAGNALCTVRYTGANPCMLTVRATSFPMPKSSAESRSNGASISQ 203
++ GS RP + G+ LCT+ P M TVR PMP A + A I
Sbjct: 153 TLDVDADGSLAATRPTFGGSLLCTIYTLNYRPQMATVRPRVMPMP---ARVMRDAARIVV 209
Query: 204 VDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKMIEKLAEKLGA 263
L +++D + K +DAE L A +VV GG GL S ENF+++ +LA LGA
Sbjct: 210 HPLGLVEDDIVTKVLSFL-PDRDAETSTLAYADVVVAGGLGLGSPENFRLVRELAALLGA 268
Query: 264 AVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDA 323
G +R +V G+V +D Q+GQTGK + P+LY+A G+SGAIQH G+ + +IVAVN D
Sbjct: 269 EYGCSRPLVQKGWVTSDRQIGQTGKTIRPKLYIAAGISGAIQHRVGVEGADLIVAVNTDK 328
Query: 324 DAPIFQVADYGLVGDLFEVIPELLEKF 350
+APIF A +V D +++P L F
Sbjct: 329 NAPIFDFAHLAIVSDAMQLLPALTAAF 355
>sp|Q53209|FIXB_RHISN Protein FixB OS=Rhizobium sp. (strain NGR234) GN=fixB PE=3 SV=1
Length = 369
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/258 (34%), Positives = 135/258 (52%), Gaps = 10/258 (3%)
Query: 101 EPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDV----IEISGSSQFV 156
EP+ K + + K ++ + + G+++ A L D ++ GS
Sbjct: 106 EPFTKALTDLVITHKPEILLLGATTLGRDLAGSVATTLLTGLTADCTGLDVDEDGSLAAT 165
Query: 157 RPIYAGNALCTVRYTGANPCMLTVRATSFPMPKSSAESRSNGASISQVDLSALDEDSIGK 216
RP + G+ LCT+ P M TVR MP+ S ++ G I D L+ED +
Sbjct: 166 RPTFGGSLLCTIYTLNCRPQMATVRPRVMRMPQRS--NKPIGRVIRH-DWRMLEEDIV-- 220
Query: 217 SRYVKHTSQD-AERPDLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAG 275
++ V S D + +L A +VV GG GL +AEN +I+ LA +G G +R +V G
Sbjct: 221 TKVVGFLSDDRSGNANLAYADVVVAGGLGLSNAENLLLIKDLALTIGGDYGCSRPLVQKG 280
Query: 276 FVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGL 335
++P D Q+GQTGK + P+LY+A G+SGA+QH G+ + +IVA+N D APIF A G+
Sbjct: 281 WMPADRQIGQTGKTIRPKLYIAAGISGAVQHRVGVEGADLIVAINTDPHAPIFDFAHVGV 340
Query: 336 VGDLFEVIPELLEKFPEK 353
V D +P L E F ++
Sbjct: 341 VTDAVSFLPALTEAFTKR 358
>sp|P77378|YDIR_ECOLI Putative electron transfer flavoprotein subunit YdiR OS=Escherichia
coli (strain K12) GN=ydiR PE=3 SV=1
Length = 312
Score = 111 bits (278), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 81/121 (66%), Gaps = 1/121 (0%)
Query: 231 DLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDA-GFVPNDLQVGQTGKI 289
DL A+ VV GRGL + ++ KM+ +LA L A VG +R + + ++ + +G +G +
Sbjct: 190 DLSKAKRVVGVGRGLAAQDDLKMVHELAAVLNAEVGCSRPIAEGENWMERERYIGVSGVL 249
Query: 290 VAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEK 349
+ +LY+ G+SG IQH+ G +KVIVA+NKD +APIF ADYGLVGD+++V+P L+ +
Sbjct: 250 LKSDLYLTLGISGQIQHMVGGNGAKVIVAINKDKNAPIFNYADYGLVGDIYKVVPALISQ 309
Query: 350 F 350
Sbjct: 310 L 310
>sp|B7LWN3|FIXB_ESCF3 Protein FixB OS=Escherichia fergusonii (strain ATCC 35469 / DSM
13698 / CDC 0568-73) GN=fixB PE=3 SV=1
Length = 313
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Query: 231 DLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVV-DAGFVPNDLQVGQTGKI 289
DL AR+VV+ GRG+ S EN + E+L + +GA + +R V + ++ ++ VG + +
Sbjct: 191 DLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLM 250
Query: 290 VAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEK 349
+ PELY+A G+SG IQH+ G S+ I A+NKD +APIFQ ADYG+VGD +++P L
Sbjct: 251 LKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAA 310
Query: 350 F 350
F
Sbjct: 311 F 311
>sp|A7ZHD5|FIXB_ECO24 Protein FixB OS=Escherichia coli O139:H28 (strain E24377A / ETEC)
GN=fixB PE=3 SV=1
Length = 313
Score = 108 bits (271), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 80/118 (67%), Gaps = 1/118 (0%)
Query: 231 DLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVV-DAGFVPNDLQVGQTGKI 289
DL AR+VV+ GRG+ S EN + E+L + +GA + +R V + ++ ++ VG + +
Sbjct: 191 DLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLM 250
Query: 290 VAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELL 347
+ PELY+A G+SG IQH+ G S+ I A+NKD +APIFQ ADYG+VGD +++P L+
Sbjct: 251 LKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALI 308
>sp|Q32K55|FIXB_SHIDS Protein FixB OS=Shigella dysenteriae serotype 1 (strain Sd197)
GN=fixB PE=3 SV=1
Length = 313
Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 79/117 (67%), Gaps = 1/117 (0%)
Query: 231 DLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVV-DAGFVPNDLQVGQTGKI 289
DL AR+VV+ GRG+ S EN + E+L + +GA + +R V + ++ ++ VG + +
Sbjct: 191 DLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLM 250
Query: 290 VAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPEL 346
+ PELY+A G+SG IQH+ G S+ I A+NKD +APIFQ ADYG+VGD +++P L
Sbjct: 251 LKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPAL 307
>sp|B5YYD6|FIXB_ECO5E Protein FixB OS=Escherichia coli O157:H7 (strain EC4115 / EHEC)
GN=fixB PE=3 SV=1
Length = 313
Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 79/117 (67%), Gaps = 1/117 (0%)
Query: 231 DLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVV-DAGFVPNDLQVGQTGKI 289
DL AR+VV+ GRG+ S EN + E+L + +GA + +R V + ++ ++ VG + +
Sbjct: 191 DLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLM 250
Query: 290 VAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPEL 346
+ PELY+A G+SG IQH+ G S+ I A+NKD +APIFQ ADYG+VGD +++P L
Sbjct: 251 LKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPAL 307
>sp|Q8XA27|FIXB_ECO57 Protein FixB OS=Escherichia coli O157:H7 GN=fixB PE=3 SV=1
Length = 313
Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 79/117 (67%), Gaps = 1/117 (0%)
Query: 231 DLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVV-DAGFVPNDLQVGQTGKI 289
DL AR+VV+ GRG+ S EN + E+L + +GA + +R V + ++ ++ VG + +
Sbjct: 191 DLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLM 250
Query: 290 VAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPEL 346
+ PELY+A G+SG IQH+ G S+ I A+NKD +APIFQ ADYG+VGD +++P L
Sbjct: 251 LKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPAL 307
>sp|Q1RGF6|FIXB_ECOUT Protein FixB OS=Escherichia coli (strain UTI89 / UPEC) GN=fixB PE=3
SV=1
Length = 313
Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 79/117 (67%), Gaps = 1/117 (0%)
Query: 231 DLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVV-DAGFVPNDLQVGQTGKI 289
DL AR+VV+ GRG+ S EN + E+L + +GA + +R V + ++ ++ VG + +
Sbjct: 191 DLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLM 250
Query: 290 VAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPEL 346
+ PELY+A G+SG IQH+ G S+ I A+NKD +APIFQ ADYG+VGD +++P L
Sbjct: 251 LKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPAL 307
>sp|A1A792|FIXB_ECOK1 Protein FixB OS=Escherichia coli O1:K1 / APEC GN=fixB PE=3 SV=1
Length = 313
Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 79/117 (67%), Gaps = 1/117 (0%)
Query: 231 DLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVV-DAGFVPNDLQVGQTGKI 289
DL AR+VV+ GRG+ S EN + E+L + +GA + +R V + ++ ++ VG + +
Sbjct: 191 DLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLM 250
Query: 290 VAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPEL 346
+ PELY+A G+SG IQH+ G S+ I A+NKD +APIFQ ADYG+VGD +++P L
Sbjct: 251 LKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPAL 307
>sp|B7MAG5|FIXB_ECO45 Protein FixB OS=Escherichia coli O45:K1 (strain S88 / ExPEC)
GN=fixB PE=3 SV=1
Length = 313
Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 79/117 (67%), Gaps = 1/117 (0%)
Query: 231 DLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVV-DAGFVPNDLQVGQTGKI 289
DL AR+VV+ GRG+ S EN + E+L + +GA + +R V + ++ ++ VG + +
Sbjct: 191 DLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLM 250
Query: 290 VAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPEL 346
+ PELY+A G+SG IQH+ G S+ I A+NKD +APIFQ ADYG+VGD +++P L
Sbjct: 251 LKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPAL 307
>sp|B1LFX6|FIXB_ECOSM Protein FixB OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=fixB
PE=3 SV=1
Length = 313
Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 79/117 (67%), Gaps = 1/117 (0%)
Query: 231 DLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVV-DAGFVPNDLQVGQTGKI 289
DL AR+VV+ GRG+ S EN + E+L + +GA + +R V + ++ ++ VG + +
Sbjct: 191 DLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLM 250
Query: 290 VAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPEL 346
+ PELY+A G+SG IQH+ G S+ I A+NKD +APIFQ ADYG+VGD +++P L
Sbjct: 251 LKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPAL 307
>sp|B7NHE6|FIXB_ECO7I Protein FixB OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC)
GN=fixB PE=3 SV=1
Length = 313
Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 79/117 (67%), Gaps = 1/117 (0%)
Query: 231 DLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVV-DAGFVPNDLQVGQTGKI 289
DL AR+VV+ GRG+ S EN + E+L + +GA + +R V + ++ ++ VG + +
Sbjct: 191 DLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLM 250
Query: 290 VAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPEL 346
+ PELY+A G+SG IQH+ G S+ I A+NKD +APIFQ ADYG+VGD +++P L
Sbjct: 251 LKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPAL 307
>sp|B7MNP9|FIXB_ECO81 Protein FixB OS=Escherichia coli O81 (strain ED1a) GN=fixB PE=3
SV=1
Length = 313
Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 79/117 (67%), Gaps = 1/117 (0%)
Query: 231 DLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVV-DAGFVPNDLQVGQTGKI 289
DL AR+VV+ GRG+ S EN + E+L + +GA + +R V + ++ ++ VG + +
Sbjct: 191 DLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLM 250
Query: 290 VAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPEL 346
+ PELY+A G+SG IQH+ G S+ I A+NKD +APIFQ ADYG+VGD +++P L
Sbjct: 251 LKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPAL 307
>sp|P59674|FIXB_ECOL6 Protein FixB OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928
/ UPEC) GN=fixB PE=3 SV=1
Length = 313
Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 79/117 (67%), Gaps = 1/117 (0%)
Query: 231 DLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVV-DAGFVPNDLQVGQTGKI 289
DL AR+VV+ GRG+ S EN + E+L + +GA + +R V + ++ ++ VG + +
Sbjct: 191 DLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLM 250
Query: 290 VAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPEL 346
+ PELY+A G+SG IQH+ G S+ I A+NKD +APIFQ ADYG+VGD +++P L
Sbjct: 251 LKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQFADYGIVGDAVKILPAL 307
>sp|B7UI88|FIXB_ECO27 Protein FixB OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC)
GN=fixB PE=3 SV=1
Length = 313
Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 79/117 (67%), Gaps = 1/117 (0%)
Query: 231 DLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVV-DAGFVPNDLQVGQTGKI 289
DL AR+VV+ GRG+ S EN + E+L + +GA + +R V + ++ ++ VG + +
Sbjct: 191 DLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLM 250
Query: 290 VAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPEL 346
+ PELY+A G+SG IQH+ G S+ I A+NKD +APIFQ ADYG+VGD +++P L
Sbjct: 251 LKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQFADYGIVGDAVKILPAL 307
>sp|B7L4G5|FIXB_ECO55 Protein FixB OS=Escherichia coli (strain 55989 / EAEC) GN=fixB PE=3
SV=1
Length = 313
Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 79/117 (67%), Gaps = 1/117 (0%)
Query: 231 DLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVV-DAGFVPNDLQVGQTGKI 289
DL AR+VV+ GRG+ S EN + E+L + +GA + +R V + ++ ++ VG + +
Sbjct: 191 DLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLM 250
Query: 290 VAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPEL 346
+ PELY+A G+SG IQH+ G S+ I A+NKD +APIFQ ADYG+VGD +++P L
Sbjct: 251 LKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPAL 307
>sp|Q0TLU7|FIXB_ECOL5 Protein FixB OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC)
GN=fixB PE=3 SV=1
Length = 313
Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 79/117 (67%), Gaps = 1/117 (0%)
Query: 231 DLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVV-DAGFVPNDLQVGQTGKI 289
DL AR+VV+ GRG+ S EN + E+L + +GA + +R V + ++ ++ VG + +
Sbjct: 191 DLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLM 250
Query: 290 VAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPEL 346
+ PELY+A G+SG IQH+ G S+ I A+NKD +APIFQ ADYG+VGD +++P L
Sbjct: 251 LKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPAL 307
>sp|Q3Z5W6|FIXB_SHISS Protein FixB OS=Shigella sonnei (strain Ss046) GN=fixB PE=3 SV=1
Length = 313
Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 79/117 (67%), Gaps = 1/117 (0%)
Query: 231 DLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVV-DAGFVPNDLQVGQTGKI 289
DL AR+VV+ GRG+ S EN + E+L + +GA + +R V + ++ ++ VG + +
Sbjct: 191 DLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLM 250
Query: 290 VAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPEL 346
+ PELY+A G+SG IQH+ G S+ I A+NKD +APIFQ ADYG+VGD +++P L
Sbjct: 251 LKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPAL 307
>sp|P31574|FIXB_ECOLI Protein FixB OS=Escherichia coli (strain K12) GN=fixB PE=3 SV=3
Length = 313
Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 79/117 (67%), Gaps = 1/117 (0%)
Query: 231 DLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVV-DAGFVPNDLQVGQTGKI 289
DL AR+VV+ GRG+ S EN + E+L + +GA + +R V + ++ ++ VG + +
Sbjct: 191 DLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLM 250
Query: 290 VAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPEL 346
+ PELY+A G+SG IQH+ G S+ I A+NKD +APIFQ ADYG+VGD +++P L
Sbjct: 251 LKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPAL 307
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.130 0.364
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 121,640,459
Number of Sequences: 539616
Number of extensions: 4793452
Number of successful extensions: 15403
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 15196
Number of HSP's gapped (non-prelim): 130
length of query: 354
length of database: 191,569,459
effective HSP length: 118
effective length of query: 236
effective length of database: 127,894,771
effective search space: 30183165956
effective search space used: 30183165956
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)