BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018529
(354 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|3UKO|B Chain B, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|4GL4|A Chain A, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
pdb|4GL4|B Chain B, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
Length = 378
Score = 336 bits (862), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 167/374 (44%), Positives = 220/374 (58%), Gaps = 26/374 (6%)
Query: 3 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
+T G ++TCKAAVA+E KPL+I+DV+VAPPQA EVRIKI YT+LC TD Y W K
Sbjct: 1 ATQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEG 60
Query: 63 LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC---------------- 106
LFP I GH HV+P + EC +C+ C
Sbjct: 61 LFPCILGHEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATG 120
Query: 107 ----------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 156
RFS+NG+P+ HF+GTSTFS+YTVVH VAKI+P APLDKVC+L CGV T
Sbjct: 121 VGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCGVPT 180
Query: 157 GLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVT 216
GLGA N AK E +D SK++E AKKFGV
Sbjct: 181 GLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVN 240
Query: 217 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 276
+FVN +HD+PIQEVI ++T+GGVD S EC GN+ M +A EC H GWG +V+VGV +
Sbjct: 241 EFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 300
Query: 277 AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKA 336
T+P ++ R KGT FG +K RT +P +V+ YMNK+++++++ITH + EINKA
Sbjct: 301 QEISTRPFQLVTGRVWKGTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKA 360
Query: 337 FEYMVKGEGLRCII 350
F+ + +G LRC++
Sbjct: 361 FDLLHEGTCLRCVL 374
>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DL9|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DLA|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLA|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLB|A Chain A, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
pdb|4DLB|B Chain B, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
Length = 396
Score = 336 bits (862), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 164/377 (43%), Positives = 223/377 (59%), Gaps = 26/377 (6%)
Query: 2 SSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT 61
S+T G ++TCKAAVAWE KPL+I+DV+VAPPQA EVR+K+ YT+LC TD Y W K
Sbjct: 18 SATQGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRVKVLYTALCHTDAYTWSGKDPE 77
Query: 62 PLFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC--------------- 106
LFP + GH HV+P + EC +C+ C
Sbjct: 78 GLFPCVLGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAAT 137
Query: 107 -----------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVS 155
RFSING+P+ HF+GTSTFS+YTVVH VAKI+P+APL+KVC+L CGV
Sbjct: 138 GVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPVAPLEKVCLLGCGVP 197
Query: 156 TGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGV 215
TGLGA N AK E +D SK+F+ AK FGV
Sbjct: 198 TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRIIGIDIDSKKFDRAKNFGV 257
Query: 216 TDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK 275
T+F+N EH++PIQ+VI ++T+GGVD S EC GN+ M SA EC H GWG +V+VGV +
Sbjct: 258 TEFINPKEHEQPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAAS 317
Query: 276 DAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINK 335
T+P ++ R KGT FG +K R+ +PS+VD Y+ K+++++++ITH + ++INK
Sbjct: 318 GQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPSLVDKYLKKEIKVDEYITHNMTLADINK 377
Query: 336 AFEYMVKGEGLRCIISM 352
AF+ M G+ LR ++ M
Sbjct: 378 AFDLMHDGDCLRVVLDM 394
>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed
With Nicotinamide Adenine Dinucleotide (Nad), And Zinc
pdb|1CDO|B Chain B, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed
With Nicotinamide Adenine Dinucleotide (Nad), And Zinc
Length = 374
Score = 280 bits (716), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 206/375 (54%), Gaps = 26/375 (6%)
Query: 3 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
+T G ++ CKAAVAWEA KPL+I+++EV P A E+RIKI T +C TDLY
Sbjct: 1 ATVGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKD 60
Query: 63 LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC---------------- 106
FP + GH V+P+F +CG+CR C
Sbjct: 61 GFPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANES 120
Query: 107 ---------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 157
RF+ G V FLGTSTFS+YTVV+ VAKI+P APLD VC+L CGVSTG
Sbjct: 121 PDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTG 180
Query: 158 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 217
GA +N AK E VD + +FE+AK FG TD
Sbjct: 181 FGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATD 240
Query: 218 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 277
FVN ++H PI +V+++MTNGGVD S+EC GN+ M +A E GWGV+VLVG
Sbjct: 241 FVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHD 300
Query: 278 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 337
V T+PI ++ RT KG+ FG +K + +P +V Y++K+++L++FITHR+P +N A
Sbjct: 301 V-ATRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAI 359
Query: 338 EYMVKGEGLRCIISM 352
+ M G+ +R ++S+
Sbjct: 360 DLMKHGKCIRTVLSL 374
>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
pdb|3QJ5|B Chain B, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
Length = 374
Score = 273 bits (699), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 150/374 (40%), Positives = 208/374 (55%), Gaps = 25/374 (6%)
Query: 4 TAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL 63
+A ++ CKAAVAWEAGKPL I+++EVAPP+A EVRIKI T++C TD Y
Sbjct: 1 SANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGC 60
Query: 64 FPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC----------------- 106
FP I GH V+P++ +CG+C+ C
Sbjct: 61 FPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGK 120
Query: 107 --------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGL 158
RF+ G+ + H++GTSTFSEYTVV VAKI+PLAPLDKVC+L CG+STG
Sbjct: 121 GLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGY 180
Query: 159 GATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDF 218
GA +N AK E VD + +F AK+FG T+
Sbjct: 181 GAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATEC 240
Query: 219 VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV 278
+N + +PIQEV+ EMT+GGVD S EC GN+ M +A E H GWGV+V+VGV +
Sbjct: 241 INPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEE 300
Query: 279 FMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFE 338
T+P ++ RT KGT FG +K +P +V YM+K++++++F+TH + F EINKAFE
Sbjct: 301 IATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFE 360
Query: 339 YMVKGEGLRCIISM 352
M G+ +R ++ +
Sbjct: 361 LMHSGKSIRTVVKI 374
>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
pdb|2FZW|B Chain B, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
Length = 373
Score = 273 bits (698), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 150/373 (40%), Positives = 207/373 (55%), Gaps = 25/373 (6%)
Query: 5 AGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF 64
A ++ CKAAVAWEAGKPL I+++EVAPP+A EVRIKI T++C TD Y F
Sbjct: 1 ANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCF 60
Query: 65 PRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC------------------ 106
P I GH V+P++ +CG+C+ C
Sbjct: 61 PVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 120
Query: 107 -------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLG 159
RF+ G+ + H++GTSTFSEYTVV VAKI+PLAPLDKVC+L CG+STG G
Sbjct: 121 LMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYG 180
Query: 160 ATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFV 219
A +N AK E VD + +F AK+FG T+ +
Sbjct: 181 AAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECI 240
Query: 220 NTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVF 279
N + +PIQEV+ EMT+GGVD S EC GN+ M +A E H GWGV+V+VGV +
Sbjct: 241 NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEI 300
Query: 280 MTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEY 339
T+P ++ RT KGT FG +K +P +V YM+K++++++F+TH + F EINKAFE
Sbjct: 301 ATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFEL 360
Query: 340 MVKGEGLRCIISM 352
M G+ +R ++ +
Sbjct: 361 MHSGKSIRTVVKI 373
>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
pdb|1MC5|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
Length = 374
Score = 273 bits (698), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 150/373 (40%), Positives = 207/373 (55%), Gaps = 25/373 (6%)
Query: 5 AGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF 64
A ++ CKAAVAWEAGKPL I+++EVAPP+A EVRIKI T++C TD Y F
Sbjct: 2 ANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCF 61
Query: 65 PRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC------------------ 106
P I GH V+P++ +CG+C+ C
Sbjct: 62 PVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 121
Query: 107 -------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLG 159
RF+ G+ + H++GTSTFSEYTVV VAKI+PLAPLDKVC+L CG+STG G
Sbjct: 122 LMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYG 181
Query: 160 ATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFV 219
A +N AK E VD + +F AK+FG T+ +
Sbjct: 182 AAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECI 241
Query: 220 NTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVF 279
N + +PIQEV+ EMT+GGVD S EC GN+ M +A E H GWGV+V+VGV +
Sbjct: 242 NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEI 301
Query: 280 MTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEY 339
T+P ++ RT KGT FG +K +P +V YM+K++++++F+TH + F EINKAFE
Sbjct: 302 ATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFEL 361
Query: 340 MVKGEGLRCIISM 352
M G+ +R ++ +
Sbjct: 362 MHSGKSIRTVVKI 374
>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1TEH|B Chain B, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1M6H|A Chain A, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6H|B Chain B, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6W|A Chain A, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase And 12-Hydroxydodecanoic Acid
pdb|1M6W|B Chain B, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase And 12-Hydroxydodecanoic Acid
pdb|1MA0|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic Acid
pdb|1MA0|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic Acid
pdb|1MP0|A Chain A, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase With Nad(H)
pdb|1MP0|B Chain B, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase With Nad(H)
pdb|2FZE|A Chain A, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
pdb|2FZE|B Chain B, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
Length = 373
Score = 273 bits (698), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 150/373 (40%), Positives = 207/373 (55%), Gaps = 25/373 (6%)
Query: 5 AGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF 64
A ++ CKAAVAWEAGKPL I+++EVAPP+A EVRIKI T++C TD Y F
Sbjct: 1 ANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCF 60
Query: 65 PRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC------------------ 106
P I GH V+P++ +CG+C+ C
Sbjct: 61 PVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 120
Query: 107 -------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLG 159
RF+ G+ + H++GTSTFSEYTVV VAKI+PLAPLDKVC+L CG+STG G
Sbjct: 121 LMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYG 180
Query: 160 ATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFV 219
A +N AK E VD + +F AK+FG T+ +
Sbjct: 181 AAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECI 240
Query: 220 NTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVF 279
N + +PIQEV+ EMT+GGVD S EC GN+ M +A E H GWGV+V+VGV +
Sbjct: 241 NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEI 300
Query: 280 MTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEY 339
T+P ++ RT KGT FG +K +P +V YM+K++++++F+TH + F EINKAFE
Sbjct: 301 ATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFEL 360
Query: 340 MVKGEGLRCIISM 352
M G+ +R ++ +
Sbjct: 361 MHSGKSIRTVVKI 373
>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol
pdb|1QV6|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol
pdb|1QV7|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,3-Difluorobenzyl Alcohol
pdb|1QV7|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,3-Difluorobenzyl Alcohol
Length = 374
Score = 265 bits (676), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 143/374 (38%), Positives = 201/374 (53%), Gaps = 26/374 (6%)
Query: 3 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
STAG ++ CKAAV WE KP I++VEVAPP+A EVRIK+ T +CR+D TP
Sbjct: 1 STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDQVVSGTLVTP 60
Query: 63 LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC---------------- 106
L P I GH V+P+FT +CG CR C
Sbjct: 61 L-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 107 ---------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 157
RF+ G+P++HFLGTSTFS+YTVV VAKI+ +PL+KVC++ CG STG
Sbjct: 120 RGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 158 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 217
G+ + VAK + VD + RF +AK+ G T+
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDRFAKAKEVGATE 239
Query: 218 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 277
VN ++ +PIQEV+ EM+NGGVD S E G +D M++A C + +GV+V+VGVP
Sbjct: 240 CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQ 299
Query: 278 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 337
P+ +L+ RT KG FG +K + +P +V +M K+ L+ ITH +PF +IN+ F
Sbjct: 300 NLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGF 359
Query: 338 EYMVKGEGLRCIIS 351
+ + GE +R I++
Sbjct: 360 DLLRSGESIRTILT 373
>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|B Chain B, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|C Chain C, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|D Chain D, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
Length = 374
Score = 264 bits (675), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 142/374 (37%), Positives = 202/374 (54%), Gaps = 26/374 (6%)
Query: 3 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
STAG ++ CKAAV WE KP I++VEVAPP+A EVRIK+ T +CR+D + TP
Sbjct: 1 STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP 60
Query: 63 LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC---------------- 106
L P I GH V+P+FT +CG CR C
Sbjct: 61 L-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 107 ---------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 157
RF+ G+P++HFLGTSTFS+YTVV VAKI+ +PL+KVC++ CG STG
Sbjct: 120 RGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 158 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 217
G+ + VAK + VD + +F +AK+ G T+
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 218 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 277
VN ++ +PIQEV+ EM+NGGVD S E G +D M++A C + +GV+V+VGVP
Sbjct: 240 CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQ 299
Query: 278 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 337
P+ +L+ RT KG FG +K + +P +V +M K+ L+ ITH +PF +IN+ F
Sbjct: 300 NLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGF 359
Query: 338 EYMVKGEGLRCIIS 351
+ + GE +R I++
Sbjct: 360 DLLRSGESIRTILT 373
>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|6ADH|B Chain B, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|2OHX|A Chain A, Refined Crystal Structure Of Liver Alcohol Dehydrogenase-
Nadh Complex At 1.8 Angstroms Resolution
pdb|2OHX|B Chain B, Refined Crystal Structure Of Liver Alcohol Dehydrogenase-
Nadh Complex At 1.8 Angstroms Resolution
pdb|2OXI|A Chain A, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|2OXI|B Chain B, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|1HLD|A Chain A, Structures Of Horse Liver Alcohol Dehydrogenase Complexed
With Nad+ And Substituted Benzyl Alcohols
pdb|1HLD|B Chain B, Structures Of Horse Liver Alcohol Dehydrogenase Complexed
With Nad+ And Substituted Benzyl Alcohols
pdb|1ADB|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADB|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADC|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADC|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|3BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|1LDY|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDE|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1HET|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HET|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HEU|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HEU|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1MG0|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1N92|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
4- Iodopyrazole
pdb|1N92|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
4- Iodopyrazole
pdb|1P1R|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1YE3|A Chain A, Horse Liver Alcohol Dehydrogenase Apoenzyme
pdb|2JHF|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHF|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|1ADF|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|1ADG|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|5ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|7ADH|A Chain A, Three-Dimensional Structure Of Isonicotinimidylated Liver
Alcohol Dehydrogenase
pdb|8ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|4DWV|A Chain A, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DWV|B Chain B, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DXH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2,2,2- Trifluoroethanol
pdb|4DXH|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2,2,2- Trifluoroethanol
Length = 374
Score = 264 bits (675), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 142/374 (37%), Positives = 202/374 (54%), Gaps = 26/374 (6%)
Query: 3 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
STAG ++ CKAAV WE KP I++VEVAPP+A EVRIK+ T +CR+D + TP
Sbjct: 1 STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP 60
Query: 63 LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC---------------- 106
L P I GH V+P+FT +CG CR C
Sbjct: 61 L-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 107 ---------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 157
RF+ G+P++HFLGTSTFS+YTVV VAKI+ +PL+KVC++ CG STG
Sbjct: 120 RGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 158 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 217
G+ + VAK + VD + +F +AK+ G T+
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 218 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 277
VN ++ +PIQEV+ EM+NGGVD S E G +D M++A C + +GV+V+VGVP
Sbjct: 240 CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQ 299
Query: 278 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 337
P+ +L+ RT KG FG +K + +P +V +M K+ L+ ITH +PF +IN+ F
Sbjct: 300 NLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGF 359
Query: 338 EYMVKGEGLRCIIS 351
+ + GE +R I++
Sbjct: 360 DLLRSGESIRTILT 373
>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
pdb|3OQ6|B Chain B, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
Length = 374
Score = 263 bits (673), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 142/374 (37%), Positives = 202/374 (54%), Gaps = 26/374 (6%)
Query: 3 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
STAG ++ CKAAV WE KP I++VEVAPP+A EVRIK+ T +CR+D + TP
Sbjct: 1 STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP 60
Query: 63 LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC---------------- 106
L P I GH V+P+FT +CG CR C
Sbjct: 61 L-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 107 ---------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 157
RF+ G+P++HFLGTSTFS+YTVV VAKI+ +PL+KVC++ CG STG
Sbjct: 120 RGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 158 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 217
G+ + VAK + VD + +F +AK+ G T+
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 218 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 277
VN ++ +PIQEV+ EM+NGGVD S E G +D M++A C + +GV+V+VGVP
Sbjct: 240 CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQ 299
Query: 278 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 337
P+ +L+ RT KG FG +K + +P +V +M K+ L+ ITH +PF +IN+ F
Sbjct: 300 NLSMNPMLLLSGRTWKGCIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGF 359
Query: 338 EYMVKGEGLRCIIS 351
+ + GE +R I++
Sbjct: 360 DLLRSGESIRTILT 373
>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDX|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|3HUD|A Chain A, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|3HUD|B Chain B, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|1DEH|A Chain A, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1DEH|B Chain B, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1HSZ|A Chain A, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1HSZ|B Chain B, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1U3U|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3U|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3V|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
pdb|1U3V|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
Length = 374
Score = 263 bits (671), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 139/374 (37%), Positives = 199/374 (53%), Gaps = 26/374 (6%)
Query: 3 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
STAG ++ CKAAV WE KP I+DVEVAPP+A EVRIK+ +CRTD + TP
Sbjct: 1 STAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVTP 60
Query: 63 LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC---------------- 106
L P I GH V+P+FT +CG CR C
Sbjct: 61 L-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNP 119
Query: 107 ---------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 157
RF+ G+P++HFLGTSTFS+YTVV VAKI+ +PL+KVC++ CG STG
Sbjct: 120 RGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTG 179
Query: 158 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 217
G+ +NVAK VD + +F +AK+ G T+
Sbjct: 180 YGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATE 239
Query: 218 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 277
+N ++ +PIQEV+ EMT+GGVD S E G +D M+++ C H+ G +V+VGVP
Sbjct: 240 CINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQ 299
Query: 278 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 337
P+ +L RT KG +G +K + +P +V +M K+ L+ ITH +PF +IN+ F
Sbjct: 300 NLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKINEGF 359
Query: 338 EYMVKGEGLRCIIS 351
+ + G+ +R +++
Sbjct: 360 DLLHSGKSIRTVLT 373
>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
pdb|1N8K|B Chain B, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
Length = 374
Score = 263 bits (671), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 141/374 (37%), Positives = 201/374 (53%), Gaps = 26/374 (6%)
Query: 3 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
STAG ++ CKAAV WE KP I++VEVAPP+A EVRIK+ T +CR+D + TP
Sbjct: 1 STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP 60
Query: 63 LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC---------------- 106
L P I GH V+P+FT +CG CR C
Sbjct: 61 L-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 107 ---------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 157
RF+ G+P++HFLGTSTFS+YTVV VAKI+ +PL+KVC++ CG STG
Sbjct: 120 RGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 158 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 217
G+ + VAK + VD + +F +AK+ G T+
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 218 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 277
VN ++ +PIQEV+ EM+NGGVD S E G +D M++A C + +GV+V+ GVP
Sbjct: 240 CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVITGVPPDSQ 299
Query: 278 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 337
P+ +L+ RT KG FG +K + +P +V +M K+ L+ ITH +PF +IN+ F
Sbjct: 300 NLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGF 359
Query: 338 EYMVKGEGLRCIIS 351
+ + GE +R I++
Sbjct: 360 DLLRSGESIRTILT 373
>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A71|B Chain B, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A72|A Chain A, An Active-Site Double Mutant (Phe93->trp, Val203->ala) Of
Horse Liver Alcohol Dehydrogenase In Complex With The
Isosteric Nad Analog Cpad
Length = 374
Score = 262 bits (670), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 141/374 (37%), Positives = 202/374 (54%), Gaps = 26/374 (6%)
Query: 3 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
STAG ++ CKAAV WE KP I++VEVAPP+A EVRIK+ T +CR+D + TP
Sbjct: 1 STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP 60
Query: 63 LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC---------------- 106
L P I GH V+P++T +CG CR C
Sbjct: 61 L-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 107 ---------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 157
RF+ G+P++HFLGTSTFS+YTVV VAKI+ +PL+KVC++ CG STG
Sbjct: 120 RGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 158 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 217
G+ + VAK + VD + +F +AK+ G T+
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 218 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 277
VN ++ +PIQEV+ EM+NGGVD S E G +D M++A C + +GV+V+VGVP
Sbjct: 240 CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQ 299
Query: 278 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 337
P+ +L+ RT KG FG +K + +P +V +M K+ L+ ITH +PF +IN+ F
Sbjct: 300 NLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGF 359
Query: 338 EYMVKGEGLRCIIS 351
+ + GE +R I++
Sbjct: 360 DLLRSGESIRTILT 373
>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of
Horse Liver Alcohol Dehydrogenase In Complex With Nad
And Inhibitor Trifluoroethanol
pdb|1AXE|B Chain B, Crystal Structure Of The Active-Site Mutant Phe93->trp Of
Horse Liver Alcohol Dehydrogenase In Complex With Nad
And Inhibitor Trifluoroethanol
Length = 374
Score = 262 bits (669), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 141/374 (37%), Positives = 202/374 (54%), Gaps = 26/374 (6%)
Query: 3 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
STAG ++ CKAAV WE KP I++VEVAPP+A EVRIK+ T +CR+D + TP
Sbjct: 1 STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP 60
Query: 63 LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC---------------- 106
L P I GH V+P++T +CG CR C
Sbjct: 61 L-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 107 ---------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 157
RF+ G+P++HFLGTSTFS+YTVV VAKI+ +PL+KVC++ CG STG
Sbjct: 120 RGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 158 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 217
G+ + VAK + VD + +F +AK+ G T+
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 218 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 277
VN ++ +PIQEV+ EM+NGGVD S E G +D M++A C + +GV+V+VGVP
Sbjct: 240 CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQ 299
Query: 278 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 337
P+ +L+ RT KG FG +K + +P +V +M K+ L+ ITH +PF +IN+ F
Sbjct: 300 NLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGF 359
Query: 338 EYMVKGEGLRCIIS 351
+ + GE +R I++
Sbjct: 360 DLLRSGESIRTILT 373
>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
pdb|1JU9|B Chain B, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
Length = 374
Score = 262 bits (669), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 141/374 (37%), Positives = 201/374 (53%), Gaps = 26/374 (6%)
Query: 3 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
STAG ++ CKAAV WE KP I++VEVAPP+A EVRIK+ T +CR+D + TP
Sbjct: 1 STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP 60
Query: 63 LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC---------------- 106
L P I GH V+P+FT +CG CR C
Sbjct: 61 L-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 107 ---------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 157
RF+ G+P++HFLGTSTFS+YTVV VAKI+ +PL+KVC++ CG STG
Sbjct: 120 RGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 158 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 217
G+ + VAK + VD + +F +AK+ G T+
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 218 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 277
VN ++ +PIQEV+ EM+NGGVD S E G +D M++A C + +GV+V+ GVP
Sbjct: 240 CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVISGVPPDSQ 299
Query: 278 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 337
P+ +L+ RT KG FG +K + +P +V +M K+ L+ ITH +PF +IN+ F
Sbjct: 300 NLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGF 359
Query: 338 EYMVKGEGLRCIIS 351
+ + GE +R I++
Sbjct: 360 DLLRSGESIRTILT 373
>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
pdb|1MGO|B Chain B, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
Length = 374
Score = 261 bits (666), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 141/374 (37%), Positives = 201/374 (53%), Gaps = 26/374 (6%)
Query: 3 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
STAG ++ CKAAV WE KP I++VEVAPP+A EVRIK+ T +CR+D + TP
Sbjct: 1 STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP 60
Query: 63 LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC---------------- 106
L P I GH V+P+ T +CG CR C
Sbjct: 61 L-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLATPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 107 ---------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 157
RF+ G+P++HFLGTSTFS+YTVV VAKI+ +PL+KVC++ CG STG
Sbjct: 120 RGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 158 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 217
G+ + VAK + VD + +F +AK+ G T+
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 218 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 277
VN ++ +PIQEV+ EM+NGGVD S E G +D M++A C + +GV+V+VGVP
Sbjct: 240 CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQ 299
Query: 278 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 337
P+ +L+ RT KG FG +K + +P +V +M K+ L+ ITH +PF +IN+ F
Sbjct: 300 NLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGF 359
Query: 338 EYMVKGEGLRCIIS 351
+ + GE +R I++
Sbjct: 360 DLLRSGESIRTILT 373
>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDY|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 260 bits (664), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 138/374 (36%), Positives = 198/374 (52%), Gaps = 26/374 (6%)
Query: 3 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
STAG ++ CKAAV WE KP I+DVEVAPP+A EVRIK+ +C TD + TP
Sbjct: 1 STAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICHTDDHVVSGNLVTP 60
Query: 63 LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC---------------- 106
L P I GH V+P+FT +CG CR C
Sbjct: 61 L-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNP 119
Query: 107 ---------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 157
RF+ G+P++HFLGTSTFS+YTVV VAKI+ +PL+KVC++ CG STG
Sbjct: 120 RGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTG 179
Query: 158 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 217
G+ +NVAK VD + +F +AK+ G T+
Sbjct: 180 YGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATE 239
Query: 218 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 277
+N ++ +PIQEV+ EMT+GGVD S E G +D M+++ C H+ G +V+VGVP
Sbjct: 240 CINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQ 299
Query: 278 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 337
P+ +L RT KG +G +K + +P +V +M K+ L+ ITH +PF +IN+ F
Sbjct: 300 NLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKINEGF 359
Query: 338 EYMVKGEGLRCIIS 351
+ + G+ +R +++
Sbjct: 360 DLLHSGKSIRTVLT 373
>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDZ|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 259 bits (663), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 138/374 (36%), Positives = 198/374 (52%), Gaps = 26/374 (6%)
Query: 3 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
STAG ++ CKAAV WE KP I+DVEVAPP+A EVRIK+ +C TD + TP
Sbjct: 1 STAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICGTDDHVVSGNLVTP 60
Query: 63 LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC---------------- 106
L P I GH V+P+FT +CG CR C
Sbjct: 61 L-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNP 119
Query: 107 ---------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 157
RF+ G+P++HFLGTSTFS+YTVV VAKI+ +PL+KVC++ CG STG
Sbjct: 120 RGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTG 179
Query: 158 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 217
G+ +NVAK VD + +F +AK+ G T+
Sbjct: 180 YGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATE 239
Query: 218 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 277
+N ++ +PIQEV+ EMT+GGVD S E G +D M+++ C H+ G +V+VGVP
Sbjct: 240 CINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQ 299
Query: 278 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 337
P+ +L RT KG +G +K + +P +V +M K+ L+ ITH +PF +IN+ F
Sbjct: 300 NLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKINEGF 359
Query: 338 EYMVKGEGLRCIIS 351
+ + G+ +R +++
Sbjct: 360 DLLHSGKSIRTVLT 373
>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
pdb|1HTB|B Chain B, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
Length = 374
Score = 259 bits (662), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 138/374 (36%), Positives = 198/374 (52%), Gaps = 26/374 (6%)
Query: 3 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
STAG ++ CKAAV WE KP I+DVEVAPP+A EVRIK+ +CRTD + TP
Sbjct: 1 STAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVTP 60
Query: 63 LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC---------------- 106
L P I GH V+P+FT +CG CR C
Sbjct: 61 L-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNP 119
Query: 107 ---------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 157
RF+ G+P++HFLGTSTFS+YTVV VAKI+ +PL+KVC++ CG STG
Sbjct: 120 RGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTG 179
Query: 158 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 217
G+ +NVAK VD + +F +AK+ G T+
Sbjct: 180 YGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATE 239
Query: 218 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 277
+N ++ +PIQEV+ EMT+GGVD S E G +D M+++ C H+ G +V+VGVP
Sbjct: 240 CINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQ 299
Query: 278 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 337
P+ +L RT KG +G +K + +P +V +M K+ L+ ITH +PF +IN+ F
Sbjct: 300 NLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKINEGF 359
Query: 338 EYMVKGEGLRCIIS 351
+ + G+ + +++
Sbjct: 360 DLLHSGKSICTVLT 373
>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double
Mutant Of Gly 293 Ala And Pro 295 Thr
pdb|1QLJ|A Chain A, Horse Liver Alcohol Dehydrogenase Apo Enzyme Double Mutant
Of Gly 293 Ala And Pro 295 Thr
Length = 374
Score = 259 bits (662), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 140/374 (37%), Positives = 200/374 (53%), Gaps = 26/374 (6%)
Query: 3 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
STAG ++ CKAAV WE KP I++VEVAPP+A EVRIK+ T +CR+D + TP
Sbjct: 1 STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP 60
Query: 63 LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC---------------- 106
L P I GH V+P+FT +CG CR C
Sbjct: 61 L-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 107 ---------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 157
RF+ G+P++HFLGTSTFS+YTVV VAKI+ +PL+KVC++ CG STG
Sbjct: 120 RGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 158 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 217
G+ + VAK + VD + +F +AK+ G T+
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 218 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 277
VN ++ +PIQEV+ EM+NGGVD S E G +D M++A C + +GV+V+V V
Sbjct: 240 CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVAVTPDSQ 299
Query: 278 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 337
P+ +L+ RT KG FG +K + +P +V +M K+ L+ ITH +PF +IN+ F
Sbjct: 300 NLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGF 359
Query: 338 EYMVKGEGLRCIIS 351
+ + GE +R I++
Sbjct: 360 DLLRSGESIRTILT 373
>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 255 bits (651), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 137/373 (36%), Positives = 198/373 (53%), Gaps = 25/373 (6%)
Query: 3 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
STAG ++ CKAAV WE KP I++VEVAPP+A EVRIK+ +CR+D + P
Sbjct: 1 STAGKVIKCKAAVLWEQKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVSGTLVAP 60
Query: 63 LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC---------------- 106
L P I GH V+P+F +CG C C
Sbjct: 61 L-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLCLKNLSMPR 119
Query: 107 --------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGL 158
RF+ G+P++HFLGTSTFS+YTVV VAKI+ +PL+KVC++ CG STG
Sbjct: 120 GTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGY 179
Query: 159 GATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDF 218
G+ + VAK + VD + +F +AK+ G T+
Sbjct: 180 GSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATEC 239
Query: 219 VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV 278
VN ++ +PIQEV+ EM+NGGVD S E G +D M++A C + +GV+V+VGVP
Sbjct: 240 VNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQN 299
Query: 279 FMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFE 338
P+ +L+ RT KG FG +K + +P +V +M K+ L+ ITH +PF +IN+ F+
Sbjct: 300 LSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFD 359
Query: 339 YMVKGEGLRCIIS 351
+ G+ +R I++
Sbjct: 360 LLRSGKSIRTILT 372
>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 253 bits (647), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 136/372 (36%), Positives = 197/372 (52%), Gaps = 25/372 (6%)
Query: 4 TAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL 63
TAG ++ CKAAV WE KP I++VEVAPP+A EVRIK+ +CR+D + PL
Sbjct: 2 TAGKVIKCKAAVLWEQKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVSGTLVAPL 61
Query: 64 FPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC----------------- 106
P I GH V+P+F +CG C C
Sbjct: 62 -PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLCLKNLSMPRG 120
Query: 107 -------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLG 159
RF+ G+P++HFLGTSTFS+YTVV VAKI+ +PL+KVC++ CG STG G
Sbjct: 121 TMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGYG 180
Query: 160 ATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFV 219
+ + VAK + VD + +F +AK+ G T+ V
Sbjct: 181 SAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV 240
Query: 220 NTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVF 279
N ++ +PIQEV+ EM+NGGVD S E G +D M++A C + +GV+V+VGVP
Sbjct: 241 NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQNL 300
Query: 280 MTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEY 339
P+ +L+ RT KG FG +K + +P +V +M K+ L+ ITH +PF +IN+ F+
Sbjct: 301 SMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDL 360
Query: 340 MVKGEGLRCIIS 351
+ G+ +R I++
Sbjct: 361 LRSGKSIRTILT 372
>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense
pdb|1HT0|B Chain B, Human Gamma-2 Alcohol Dehydrogense
pdb|1U3W|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Gamma-2-
Gamma-2 Isoform Complexed With N-1-Methylheptylformamide
Determined To 1.45 Angstrom Resolution
pdb|1U3W|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Gamma-2-
Gamma-2 Isoform Complexed With N-1-Methylheptylformamide
Determined To 1.45 Angstrom Resolution
Length = 374
Score = 253 bits (646), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 134/374 (35%), Positives = 198/374 (52%), Gaps = 26/374 (6%)
Query: 3 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
STAG ++ CKAAV WE KP I++VEVAPP+A EVRIK+ +CR+D + TP
Sbjct: 1 STAGKVIKCKAAVLWELKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDEHVVSGNLVTP 60
Query: 63 LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC---------------- 106
L P I GH V+P+FT +CG CR C
Sbjct: 61 L-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRICKNPESNYCLKNDLGNP 119
Query: 107 ---------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 157
RF+ +G+P++HF+G STFS+YTVV VAKI+ +PL+KVC++ CG STG
Sbjct: 120 RGTLQDGTRRFTCSGKPIHHFVGVSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTG 179
Query: 158 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 217
G+ + VAK VD + +F +AK+ G T+
Sbjct: 180 YGSAVKVAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATE 239
Query: 218 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 277
+N ++ +PIQEV+ EMT+GGVD S E G +D M+++ C H+ G +V+VGVP
Sbjct: 240 CINPQDYKKPIQEVLKEMTDGGVDFSFEVIGQLDTMMASLLCCHEACGTSVIVGVPPDSQ 299
Query: 278 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 337
P+ +L RT KG FG +K + +P +V +M K+ L+ IT+ +PF +IN+ F
Sbjct: 300 NLSINPMLLLTGRTWKGAIFGGFKSKESVPKLVADFMAKKFSLDALITNVLPFEKINEGF 359
Query: 338 EYMVKGEGLRCIIS 351
+ + G+ +R +++
Sbjct: 360 DLLRSGKSIRTVLT 373
>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|B Chain B, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|C Chain C, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|D Chain D, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
Length = 381
Score = 249 bits (635), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 137/376 (36%), Positives = 194/376 (51%), Gaps = 29/376 (7%)
Query: 4 TAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL 63
T G ++ CKAA+AWEAGKPL I++VEVAPP+A EVRI+I TSLC TD +SK +
Sbjct: 4 TKGKVIKCKAAIAWEAGKPLCIEEVEVAPPKAHEVRIQIIATSLCHTDATVIDSKFEGLA 63
Query: 64 FPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC----------------- 106
FP I GH V+P++ C C+ C
Sbjct: 64 FPVIVGHEAAGIVESIGPGVTNVKPGDKVIPLYAPLCRKCKFCLSPLTNLCGKISNLKSP 123
Query: 107 ------------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 154
RF+ G+PV HF GTSTFS+YTVV +AKI+ A L++VC+L CG
Sbjct: 124 ASDQQLMEDKTSRFTCKGKPVYHFFGTSTFSQYTVVSDINLAKIDDDANLERVCLLGCGF 183
Query: 155 STGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFG 214
STG GA +N AK +D +S++F +AK G
Sbjct: 184 STGYGAAINNAKVTPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINSEKFVKAKALG 243
Query: 215 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 274
TD +N + +PIQEVI E+T GGVD +++C G + M +A +C GWG +GV +
Sbjct: 244 ATDCLNPRDLHKPIQEVIIELTKGGVDFALDCAGGSETMKAALDCTTAGWGSCTFIGVAA 303
Query: 275 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 334
P ++ RT+ GTFFG +K +P +V Y NK+ L+ +TH +PF +I+
Sbjct: 304 GSKGLTVFPEELIIGRTINGTFFGGWKSVDSIPKLVTDYKNKKFNLDALVTHTLPFDKIS 363
Query: 335 KAFEYMVKGEGLRCII 350
+AF+ M +G+ +R I+
Sbjct: 364 EAFDLMNQGKSIRTIL 379
>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1HSO|B Chain B, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1U3T|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
pdb|1U3T|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
Length = 374
Score = 245 bits (625), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 134/373 (35%), Positives = 192/373 (51%), Gaps = 26/373 (6%)
Query: 3 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
STAG ++ CKAAV WE KP I++VEVAPP+A EVRIK+ +C TD + TP
Sbjct: 1 STAGKVIKCKAAVLWELKKPFSIEEVEVAPPKAHEVRIKMVAVGICGTDDHVVSGTMVTP 60
Query: 63 LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC---------------- 106
L P I GH V+P+ +CG CR C
Sbjct: 61 L-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLAIPQCGKCRICKNPESNYCLKNDVSNP 119
Query: 107 ---------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 157
RF+ +P++HFLG STFS+YTVV VAKI+ +PL+KVC++ CG STG
Sbjct: 120 QGTLQDGTSRFTCRRKPIHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTG 179
Query: 158 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 217
G+ +NVAK VD + +F +AK+ G T+
Sbjct: 180 YGSAVNVAKVTPGSTCAVFGLGGVGLSAIMGCKAAGAARIIAVDINKDKFAKAKELGATE 239
Query: 218 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 277
+N ++ +PIQEV+ EMT+GGVD S E G +D M+++ C H+ G +V+VGVP
Sbjct: 240 CINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDSQ 299
Query: 278 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 337
P+ +L RT KG G +K + +P +V +M K+ L+ ITH +PF +IN+ F
Sbjct: 300 NLSMNPMLLLTGRTWKGAILGGFKSKECVPKLVADFMAKKFSLDALITHVLPFEKINEGF 359
Query: 338 EYMVKGEGLRCII 350
+ + G+ +R I+
Sbjct: 360 DLLHSGKSIRTIL 372
>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
pdb|1E3L|B Chain B, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
Length = 376
Score = 226 bits (576), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 122/379 (32%), Positives = 193/379 (50%), Gaps = 34/379 (8%)
Query: 4 TAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL 63
T G ++ CKAA+AW+ G PL I+++EV+PP+A EVRI++ T +C TD+ + K + L
Sbjct: 2 TQGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCHTDINATDPK-KKAL 60
Query: 64 FPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC----------------- 106
FP + GH V+P F +C C+ C
Sbjct: 61 FPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYP 120
Query: 107 ------------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 154
RF+ G + HF+G S+FS+YTVV +A+++ A L++VC++ CG
Sbjct: 121 TIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGF 180
Query: 155 STGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFG 214
S+G GA +N AK +D + ++F +AK G
Sbjct: 181 SSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALG 240
Query: 215 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 274
TD +N E D+P+Q+VI E+T GGVD S++C G + +A +C GWG +VG
Sbjct: 241 ATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKV 300
Query: 275 KDAVFMTKP-INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEI 333
+ MT P ++V+ R++ GTFFG +K +P++V Y NK+ +L+ +TH +PF I
Sbjct: 301 DE---MTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESI 357
Query: 334 NKAFEYMVKGEGLRCIISM 352
N A + M +G+ +R I++
Sbjct: 358 NDAIDLMKEGKSIRTILTF 376
>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|B Chain B, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|C Chain C, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|D Chain D, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
Length = 373
Score = 226 bits (575), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 123/372 (33%), Positives = 186/372 (50%), Gaps = 25/372 (6%)
Query: 4 TAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL 63
TAG ++ CKAAV WE +P I+++EVAPP+ EVRIKI T +CRTD + +
Sbjct: 2 TAGKVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKGT-MVSK 60
Query: 64 FPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCR---------------- 107
FP I GH V+P+F +C +C CR
Sbjct: 61 FPVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITGRG 120
Query: 108 --------FSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLG 159
F+ G+PV+HFL TSTF+EYTVV VAKI+ AP +KVC++ CG STG G
Sbjct: 121 VLADGTTRFTCKGKPVHHFLNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYG 180
Query: 160 ATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFV 219
A + K + +D + +FE+A G T+ +
Sbjct: 181 AAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECI 240
Query: 220 NTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVF 279
+ + +PI EV++EMT V + E G+++ MI A H +G +V+VGVP +
Sbjct: 241 SPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKML 300
Query: 280 MTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEY 339
P+ + RT KG FG K R D+P +V ++ K+ +L++ ITH +PF +I++ FE
Sbjct: 301 TYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITHVLPFKKISEGFEL 360
Query: 340 MVKGEGLRCIIS 351
+ G+ +R +++
Sbjct: 361 LNSGQSIRTVLT 372
>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3E|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3I|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh And
Inhibitor
pdb|1E3I|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh And
Inhibitor
Length = 376
Score = 225 bits (574), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 122/379 (32%), Positives = 193/379 (50%), Gaps = 34/379 (8%)
Query: 4 TAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL 63
T G ++ CKAA+AW+ G PL I+++EV+PP+A EVRI++ T +C TD+ + K + L
Sbjct: 2 TQGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK-KKAL 60
Query: 64 FPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC----------------- 106
FP + GH V+P F +C C+ C
Sbjct: 61 FPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYP 120
Query: 107 ------------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 154
RF+ G + HF+G S+FS+YTVV +A+++ A L++VC++ CG
Sbjct: 121 TIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGF 180
Query: 155 STGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFG 214
S+G GA +N AK +D + ++F +AK G
Sbjct: 181 SSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALG 240
Query: 215 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 274
TD +N E D+P+Q+VI E+T GGVD S++C G + +A +C GWG +VG
Sbjct: 241 ATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKV 300
Query: 275 KDAVFMTKP-INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEI 333
+ MT P ++V+ R++ GTFFG +K +P++V Y NK+ +L+ +TH +PF I
Sbjct: 301 DE---MTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESI 357
Query: 334 NKAFEYMVKGEGLRCIISM 352
N A + M +G+ +R I++
Sbjct: 358 NDAIDLMKEGKSIRTILTF 376
>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|B Chain B, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|C Chain C, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|D Chain D, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1D1S|A Chain A, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|B Chain B, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|C Chain C, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|D Chain D, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
Length = 373
Score = 225 bits (573), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 122/372 (32%), Positives = 186/372 (50%), Gaps = 25/372 (6%)
Query: 4 TAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL 63
TAG ++ CKAAV WE +P I+++EVAPP+ EVRIKI T +CRTD + +
Sbjct: 2 TAGKVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKGT-MVSK 60
Query: 64 FPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCR---------------- 107
FP I GH V+P+F +C +C CR
Sbjct: 61 FPVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITGRG 120
Query: 108 --------FSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLG 159
F+ G+PV+HF+ TSTF+EYTVV VAKI+ AP +KVC++ CG STG G
Sbjct: 121 VLADGTTRFTCKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYG 180
Query: 160 ATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFV 219
A + K + +D + +FE+A G T+ +
Sbjct: 181 AAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECI 240
Query: 220 NTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVF 279
+ + +PI EV++EMT V + E G+++ MI A H +G +V+VGVP +
Sbjct: 241 SPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKML 300
Query: 280 MTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEY 339
P+ + RT KG FG K R D+P +V ++ K+ +L++ ITH +PF +I++ FE
Sbjct: 301 TYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITHVLPFKKISEGFEL 360
Query: 340 MVKGEGLRCIIS 351
+ G+ +R +++
Sbjct: 361 LNSGQSIRTVLT 372
>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0C|B Chain B, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0F|A Chain A, Crystal Structure Of The Binary Complex: Nadp(H)-Dependent
Vertebrate Alcohol Dehydrogenase (Adh8) With The
Cofactor Nadp
pdb|1P0F|B Chain B, Crystal Structure Of The Binary Complex: Nadp(H)-Dependent
Vertebrate Alcohol Dehydrogenase (Adh8) With The
Cofactor Nadp
Length = 373
Score = 217 bits (553), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 129/372 (34%), Positives = 192/372 (51%), Gaps = 28/372 (7%)
Query: 4 TAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL 63
TAG +TCKAAVAWE KPL ++ + VAPP+A EVRIKI + +C +D + +
Sbjct: 3 TAGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPSK- 61
Query: 64 FPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHC----------------- 106
FP I GH V+P+F +CG CR C
Sbjct: 62 FPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKT 121
Query: 107 --------RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGL 158
RF+ G+P+ + +GTSTF+EYTVV VAKI+P APL+ C++ CG +TG
Sbjct: 122 GLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLES-CLIGCGFATGY 180
Query: 159 GATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDF 218
GA +N AK V +F +A + G T+
Sbjct: 181 GAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATEC 240
Query: 219 VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV 278
+N ++D+PI EVI E TNGGVD +VEC G I+ M++A + + G GV V++G+ S +
Sbjct: 241 LNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNER 300
Query: 279 FMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFE 338
P+ +L R+LKG+ FG +K ++ +VD YM K++ + ++ ++ +INKAFE
Sbjct: 301 LPLDPLLLLTGRSLKGSVFGGFKGE-EVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFE 359
Query: 339 YMVKGEGLRCII 350
+ G+G+R I+
Sbjct: 360 LLSSGQGVRSIM 371
>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From
Acinetobacter Calcoaceticus
Length = 371
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 144/369 (39%), Gaps = 36/369 (9%)
Query: 13 AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 72
AAV G +Q +++ PQ EV +K+ T +C TDL + K PL P + GH
Sbjct: 9 AAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVPL-PAVLGHEG 67
Query: 73 XXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCR----------FSIN----------- 111
HV+ + G CG C C F N
Sbjct: 68 SGIIEAIGPNVTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHA 126
Query: 112 ------GEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA 165
G +HF S+F+ Y + K+ P++ + L CG+ TG GA +N
Sbjct: 127 LCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPLGCGIQTGAGACINAL 186
Query: 166 KPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHD 225
K VD R E AK+ G T +N+ D
Sbjct: 187 KVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQD 246
Query: 226 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS--KDAVFMTKP 283
P+ I E+T+GGV+ ++E TG+ + + + + +AV VG P A F
Sbjct: 247 -PV-AAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAV-VGAPQLGTTAQFDVND 303
Query: 284 INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKG 343
+ +L +T+ G G+ P+ +P +V +Y + ++ + F EIN+A KG
Sbjct: 304 L-LLGGKTILGVVEGSGSPKKFIPELVRLYQQGKFPFDQLVKFY-AFDEINQAAIDSRKG 361
Query: 344 EGLRCIISM 352
L+ II +
Sbjct: 362 ITLKPIIKI 370
>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From
Sulfolobus Solfataricus
Length = 344
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 144/348 (41%), Gaps = 26/348 (7%)
Query: 8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFW---ESKGQTPLF 64
++ KAA+ + +PL I+DV + PQ EV I+I +CRTDL W E+K Q
Sbjct: 1 MVKSKAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAK-QGFRL 59
Query: 65 PRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGE--CGDCRHCRFSI-NGEPVNHFLGT 121
P I GH V+ G+ C CR +F+I + +
Sbjct: 60 PIILGHENAGTIVEVGELAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTN 119
Query: 122 STFSEYTVVHSG-CVAKINPLAPLDKVCILSCGVSTGLGATLN----VAKPERXXXXXXX 176
FSEY +V S + K+N L+P++ + G +T +GA ++K
Sbjct: 120 GGFSEYMLVKSSRWLVKLNSLSPVEAAPLADAG-TTSMGAIRQALPFISKFAEPVVIVNG 178
Query: 177 XXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT 236
+ RS K + A + G D+V+ + + +I ++T
Sbjct: 179 IGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELG-ADYVS---EMKDAESLINKLT 234
Query: 237 NG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGT 295
+G G +++ G + + + + G +LVG+ K V N++ L
Sbjct: 235 DGLGASIAIDLVGTEETTYNLGKLLAQE-GAIILVGMEGKRVSLEAFDTAVWNKKLLG-- 291
Query: 296 FFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKG 343
NY DL VV +++ +++ +I ++P +INKAF + +G
Sbjct: 292 --SNYGSLNDLEDVV--RLSESGKIKPYII-KVPLDDINKAFTNLDEG 334
>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|B Chain B, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|C Chain C, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|D Chain D, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
Length = 339
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 142/362 (39%), Gaps = 44/362 (12%)
Query: 12 KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYF----WESKGQTPLFPRI 67
KAAV + +PL I++VE EV ++IK +C TDL+ W K + PL P
Sbjct: 2 KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIP-- 59
Query: 68 FGHXXXXXXXXXXXXXXXXXXXXHV-LPVFTGECGDCRHCRFSINGEPV----NHFLGTS 122
GH V +P CG HC + ++G+ G S
Sbjct: 60 -GHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACG---HCDYCLSGQETLCEHQKNAGYS 115
Query: 123 T---FSEYTVVHSGCVAKI-NPLAPLDKVCILSCGVSTGLGATLNVAKPERXXXXXXXXX 178
++EY + V KI + L+ + I GV+T + AKP
Sbjct: 116 VDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIYGIGG 175
Query: 179 XXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN- 237
VD ++ E AK+ G VN P++E A+
Sbjct: 176 LGHVAVQYAKAMGLNVVA---VDIGDEKLELAKELGADLVVN------PLKEDAAKFMKE 226
Query: 238 --GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI--NVLNERTLK 293
GGV +V + SA+ + G G VLVG+P ++ M PI VLN +
Sbjct: 227 KVGGVHAAVVTAVSKPAFQSAYNSIRRG-GACVLVGLPPEE---MPIPIFDTVLNGIKII 282
Query: 294 GTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE-GLRCIISM 352
G+ G R DL + ++ K I P +IN+ F+ M+KG+ R ++++
Sbjct: 283 GSIVGT---RKDLQEALQFAAEGKV---KTIIEVQPLEKINEVFDRMLKGQINGRVVLTL 336
Query: 353 ED 354
ED
Sbjct: 337 ED 338
>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|C Chain C, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|B Chain B, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|D Chain D, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
Length = 339
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 142/362 (39%), Gaps = 44/362 (12%)
Query: 12 KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYF----WESKGQTPLFPRI 67
KAAV + +PL I++VE EV ++IK +C TDL+ W K + PL P
Sbjct: 2 KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIP-- 59
Query: 68 FGHXXXXXXXXXXXXXXXXXXXXHV-LPVFTGECGDCRHCRFSINGEPV----NHFLGTS 122
GH V +P CG HC + ++G+ G S
Sbjct: 60 -GHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACG---HCDYCLSGQETLCEHQKNAGYS 115
Query: 123 T---FSEYTVVHSGCVAKI-NPLAPLDKVCILSCGVSTGLGATLNVAKPERXXXXXXXXX 178
++EY + V KI + L+ + I GV+T + AKP
Sbjct: 116 VDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIYGIGG 175
Query: 179 XXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN- 237
VD ++ E AK+ G VN P++E A+
Sbjct: 176 FGHVAVQYAKAMGLNVVA---VDIGDEKLELAKELGADLVVN------PLKEDAAKFMKE 226
Query: 238 --GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI--NVLNERTLK 293
GGV +V + SA+ + G G VLVG+P ++ M PI VLN +
Sbjct: 227 KVGGVHAAVVTAVSKPAFQSAYNSIRRG-GACVLVGLPPEE---MPIPIFDTVLNGIKII 282
Query: 294 GTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE-GLRCIISM 352
G+ G R DL + ++ K I P +IN+ F+ M+KG+ R ++++
Sbjct: 283 GSIVGT---RKDLQEALQFAAEGKV---KTIIEVQPLEKINEVFDRMLKGQINGRVVLTL 336
Query: 353 ED 354
ED
Sbjct: 337 ED 338
>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|B Chain B, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|C Chain C, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|D Chain D, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
Length = 365
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 125/360 (34%), Gaps = 57/360 (15%)
Query: 10 TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYF----WESKGQTPLFP 65
T KAAV GKPL I +V + P ++++ I+ + +C TDL+ W K P P
Sbjct: 25 TMKAAVVRAFGKPLTIDEVPIPQPGPGQIQVAIQASGVCHTDLHAAEGDWPVKPNPPFIP 84
Query: 66 RIFGHXXXXXXXXXXXXXXXXXXXXHV-LPVFTGECGDCRHC--------------RFSI 110
GH V +P CG CRHC +S+
Sbjct: 85 ---GHEGVGFVSAVGSGVKHVKEGDRVGIPWLYTACGHCRHCLGGWETLCEEQLNTGYSV 141
Query: 111 NGEPVNHFLGTSTFSEYTVVHSGCVAKI------NPLAPLDKVCILSCGVSTGLGATLNV 164
NG F+EY V V + N +AP +L GV+ G +
Sbjct: 142 NG----------GFAEYVVADPNFVGHLPKNIDFNEIAP-----VLCAGVTVYKGLKVTD 186
Query: 165 AKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEH 224
KP VD ++ + A++ G T VN
Sbjct: 187 TKP---GDWVVISGIGGLGHMAVQYARAMGLNVAAVDIDDRKLDLARRLGATVTVNAKTV 243
Query: 225 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI 284
P + E T+GG + + A V G G L G+P D F
Sbjct: 244 ADPAAYIRKE-TDGGAQGVLVTAVSPKAFEQALGMVARG-GTVSLNGLPPGD--FPLSIF 299
Query: 285 N-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKG 343
N VLN T++G+ G R DL +D + ++ K +IN F+ M +G
Sbjct: 300 NMVLNGVTVRGSIVGT---RLDLQESLDFAADGKV---KATIQTGKLEDINAIFDDMRQG 353
>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase
Length = 355
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 75/152 (49%), Gaps = 9/152 (5%)
Query: 201 DRSSKRFEEAKKFGVTDFVNTSEHDRP--IQEVIAEMTNGGVDRSVECTGNIDNMISAFE 258
D S+ R +AK+ G DF+ ++ P I + + + + ++ECTG ++ +
Sbjct: 202 DLSASRLSKAKEVG-ADFILEISNESPEEIAKKVEGLLGSKPEVTIECTGVETSIQAGIY 260
Query: 259 CVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQL 318
H G G VLVG+ S+ MT + +++ T + G ++ P + M +K +
Sbjct: 261 ATHSG-GTLVLVGLGSE----MTS-VPLVHAATREVDIKGVFRYCNTWPMAISMLASKSV 314
Query: 319 ELEKFITHRIPFSEINKAFEYMVKGEGLRCII 350
++ +THR P + +AFE KG GL+ +I
Sbjct: 315 NVKPLVTHRFPLEKALEAFETSKKGLGLKVMI 346
>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
pdb|2EER|B Chain B, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
Length = 347
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/339 (20%), Positives = 131/339 (38%), Gaps = 28/339 (8%)
Query: 18 EAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQTPL-------FPRIFG 69
E GKPL ++D+ + P+ +V IKI+ +C +D++ + + G + P G
Sbjct: 8 EIGKPLKLEDIPIPKPKGSQVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLG 67
Query: 70 HXXXXXXXXXXXXXXXXXXXXHV-LPVFTGECGDCRHCRFS---INGEPVNHFLGTS--- 122
H V + + GE G+C +CR + P +LG +
Sbjct: 68 HEIAGRIEEVGDEVVGYSKGDLVAVNPWEGE-GNCYYCRIGEEHLCDSP--RWLGINYDG 124
Query: 123 TFSEYTVV-HSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERXXXXXXXXXXXX 181
++EY +V H + K+ L+ ++ + GV+T P +
Sbjct: 125 AYAEYVLVPHYKYLYKLRRLSAVEAAPLTCSGVTTYRAVRKASLDPSK-TLVVIGAGGGL 183
Query: 182 XXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVD 241
VD + E AK+ G +N S D P+ E+ G D
Sbjct: 184 GTMAIQIAKAVSGATIIGVDVREEALEAAKRAGADYVINASSQD-PVSEIRRITQGKGAD 242
Query: 242 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK 301
++ N + +S + V G V+VG+ D + P+ LNE G+ GN
Sbjct: 243 AVIDLN-NSEKTLSIYPYVLAKQGKYVMVGLFGADLKYHA-PLITLNEVQFIGSLVGN-- 298
Query: 302 PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYM 340
++D + M + + +++ +T + E N+A + +
Sbjct: 299 -QSDFLGI--MSLAEAGKVKPMVTKTMKLEEANEAIDNL 334
>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|B Chain B, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|C Chain C, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|D Chain D, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
Length = 380
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 71/156 (45%), Gaps = 10/156 (6%)
Query: 203 SSKRFEEAKKFGVTDFVN---TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFE 258
S R + A++ G +N TS +R ++ I ++T+G G D +E TG+ ++ E
Sbjct: 229 SPNRLKLAEEIGADLTLNRRETSVEER--RKAIMDITHGRGADFILEATGDSRALLEGSE 286
Query: 259 CVHDGWGVAVL-VGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQ 317
+ G +V V VP F VL T KG + + S+ N Q
Sbjct: 287 LLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTSHFVKTVSITSR--NYQ 344
Query: 318 LELEKFITHRIPFSEINKAFEYMVKGEGLRCIISME 353
L L K ITHR+P E NKA E M E L+ I+ E
Sbjct: 345 L-LSKLITHRLPLKEANKALELMESREALKVILYPE 379
>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|B Chain B, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|C Chain C, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|D Chain D, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|E Chain E, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|F Chain F, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|G Chain G, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|H Chain H, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
Length = 342
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 123/353 (34%), Gaps = 43/353 (12%)
Query: 10 TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIF 68
T KAAV G PL I++V+V P +V +KI+ + +C TDL+ E P P I
Sbjct: 6 TMKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIP 65
Query: 69 GHXXXXXXXXXXXXXXXXXXXXHV-LPVFTGECGDCRHC--------------RFSINGE 113
GH V +P CG C HC +S+NG
Sbjct: 66 GHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNG- 124
Query: 114 PVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVC-ILSCGVSTGLGATLNVAKPERXXX 172
++EY + V + ++ IL GV+ G A+P +
Sbjct: 125 ---------GYAEYVLADPNYVGILPKNVEFAEIAPILCAGVTVYKGLKQTNARPGQ--- 172
Query: 173 XXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVI 232
+D + E A+K G + VN + D P++ +
Sbjct: 173 WVAISGIGGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGASLTVNARQED-PVEAIQ 231
Query: 233 AEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERT 291
++ G V T ++ + G LVG+P D F T + VL
Sbjct: 232 RDI---GGAHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPPGD--FPTPIFDVVLKGLH 286
Query: 292 LKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE 344
+ G+ G R DL +D L K H +IN+ + M G+
Sbjct: 287 IAGSIVGT---RADLQEALDFAGEG---LVKATIHPGKLDDINQILDQMRAGQ 333
>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
pdb|4ILK|B Chain B, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
Length = 359
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 113/328 (34%), Gaps = 32/328 (9%)
Query: 23 LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXXXXXXXXXXXX 82
L I + E+ P A EVR+K+K +C +D + + +PR+ GH
Sbjct: 32 LSIIEREIPTPSAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEG 91
Query: 83 XXXXXXXXHVLPVFTGECGDCRHCRFSINGEP-------VNHFLGTSTFSEYTVVHSGCV 135
V CG C C G+P V FSEY VV +
Sbjct: 92 VESARVGERVAVDPVVSCGHCYPCSI---GKPNVCTTLAVLGVHADGGFSEYAVVPAKNA 148
Query: 136 AKINPLAPLDKVCILSCGVSTGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXX 195
KI P A D+ ++ + T + E
Sbjct: 149 WKI-PEAVADQYAVMIEPFTIAANVTGHGQPTENDTVLVYGAGPIGLTIVQVLKGVYNVK 207
Query: 196 XXXXVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMIS 255
DR +R E+AK+ G +N S+ P+ E AE + ++ T ID
Sbjct: 208 NVIVADRIDERLEKAKESGADWAINNSQ--TPLGESFAE-------KGIKPTLIIDAA-- 256
Query: 256 AFECVHDGWGVAVLVGVPSKDAVFM---TKPINVLNERTLKGTFFGNYKPRTD---LPSV 309
C AV + P+ V M ++P V+ ++ + G + R + P V
Sbjct: 257 ---CHPSILKEAVTLASPAARIVLMGFSSEPSEVI-QQGITGKELSIFSSRLNANKFPVV 312
Query: 310 VDMYMNKQLELEKFITHRIPFSEINKAF 337
+D ++ EK ITH F + A
Sbjct: 313 IDWLSKGLIKPEKLITHTFDFQHVADAI 340
>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|B Chain B, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|C Chain C, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|D Chain D, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL8|A Chain A, Human SdhNAD+ COMPLEX
pdb|1PL8|B Chain B, Human SdhNAD+ COMPLEX
pdb|1PL8|C Chain C, Human SdhNAD+ COMPLEX
pdb|1PL8|D Chain D, Human SdhNAD+ COMPLEX
Length = 356
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 17/156 (10%)
Query: 201 DRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGV----DRSVECTGNIDNMISA 256
D S+ R +AK+ G D V + P QE IA G + + ++ECTG ++ +
Sbjct: 203 DLSATRLSKAKEIG-ADLVLQISKESP-QE-IARKVEGQLGCKPEVTIECTGAEASIQAG 259
Query: 257 FECVHDGWGVAVLVGVPSKDAVFMTKPI--NVLNERTLKGTFFGNYKPRTDLPSVVDMYM 314
G G VLVG+ S+ T P+ + E +KG F + P + M
Sbjct: 260 IYATRSG-GTLVLVGLGSE---MTTVPLLHAAIREVDIKGVF----RYCNTWPVAISMLA 311
Query: 315 NKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII 350
+K + ++ +THR P + +AFE KG GL+ ++
Sbjct: 312 SKSVNVKPLVTHRFPLEKALEAFETFKKGLGLKIML 347
>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
pdb|1R37|B Chain B, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
Length = 347
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 70/339 (20%), Positives = 131/339 (38%), Gaps = 28/339 (8%)
Query: 18 EAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQTPL-------FPRIFG 69
E GKPL +Q++ V P+ +V IK++ +C +D++ + + G + P G
Sbjct: 8 EIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLG 67
Query: 70 HXXXXXXXXXXXXXXXXXXXXHV-LPVFTGECGDCRHCRFS---INGEPVNHFLGTS--- 122
H V + + GE G+C +CR + P +LG +
Sbjct: 68 HEIAGKIEEVGDEVVGYSKGDLVAVNPWQGE-GNCYYCRIGEEHLCDSP--RWLGINFDG 124
Query: 123 TFSEYTVV-HSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERXXXXXXXXXXXX 181
++EY +V H + K+ L ++ + G++T P +
Sbjct: 125 AYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTK-TLLVVGAGGGL 183
Query: 182 XXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVD 241
VD + E AK+ G +N S D P+ E+ + GVD
Sbjct: 184 GTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQD-PLAEIRRITESKGVD 242
Query: 242 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK 301
++ N + +S + G V+VG+ D + P+ L+E G+ GN
Sbjct: 243 AVIDLN-NSEKTLSVYPKALAKQGKYVMVGLFGADLHYHA-PLITLSEIQFVGSLVGN-- 298
Query: 302 PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYM 340
++D + M + + +++ IT + E N+A + +
Sbjct: 299 -QSDFLGI--MRLAEAGKVKPMITKTMKLEEANEAIDNL 334
>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2DQ4|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2EJV|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
pdb|2EJV|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
Length = 343
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 132/353 (37%), Gaps = 51/353 (14%)
Query: 23 LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE----SKGQTPLFPRIFGHXXXXXXXX 78
L + D V P E+ ++++ S+C TDL+ W+ ++G+ P + GH
Sbjct: 13 LTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRI-RPPLVTGHEFSGVVEA 71
Query: 79 XXXXXXXXXXXXHVLPVFTGECGDCRHCRFSINGEPVN-HFLGT---STFSEYTVVHSGC 134
HV C C CR +N LG F+EY VV +
Sbjct: 72 VGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRDGGFAEYVVVPAEN 131
Query: 135 VAKINPL-APLDKVCIL------------SCGVSTGLGATLNVAKPERXXXXXXXXXXXX 181
A +NP P + IL GVS G + A P
Sbjct: 132 -AWVNPKDLPFEVAAILEPFGNAVHTVYAGSGVS-GKSVLITGAGP-------------I 176
Query: 182 XXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVD 241
D + R A+ + VN E D + EV+ +T GV+
Sbjct: 177 GLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLEED--LLEVVRRVTGSGVE 233
Query: 242 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKG-TFFGNY 300
+E +GN + + G G A ++G+PS F ++ E ++G T FG
Sbjct: 234 VLLEFSGNEAAIHQGLMALIPG-GEARILGIPSDPIRF-----DLAGELVMRGITAFGIA 287
Query: 301 KPR---TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII 350
R T + +Y + +++L +THR+P S +AF + G+ ++ I+
Sbjct: 288 GRRLWQTWMQGTALVY-SGRVDLSPLLTHRLPLSRYREAFGLLASGQAVKVIL 339
>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|B Chain B, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|C Chain C, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|D Chain D, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|E Chain E, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|H Chain H, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NVG|A Chain A, N249y Mutant Of The Alcohol Dehydrogenase From The
Archaeon Sulfolobus Solfataricus-tetragonal Crystal Form
Length = 347
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 69/339 (20%), Positives = 131/339 (38%), Gaps = 28/339 (8%)
Query: 18 EAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQTPL-------FPRIFG 69
E GKPL +Q++ V P+ +V IK++ +C +D++ + + G + P G
Sbjct: 8 EIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLG 67
Query: 70 HXXXXXXXXXXXXXXXXXXXXHV-LPVFTGECGDCRHCRFS---INGEPVNHFLGTS--- 122
H V + + GE G+C +CR + P +LG +
Sbjct: 68 HEIAGKIEEVGDEVVGYSKGDLVAVNPWQGE-GNCYYCRIGEEHLCDSP--RWLGINFDG 124
Query: 123 TFSEYTVV-HSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERXXXXXXXXXXXX 181
++EY +V H + K+ L ++ + G++T P +
Sbjct: 125 AYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTK-TLLVVGAGGGL 183
Query: 182 XXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVD 241
VD + E AK+ G +N S D P+ E+ + GVD
Sbjct: 184 GTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQD-PLAEIRRITESKGVD 242
Query: 242 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK 301
++ + + +S + G V+VG+ D + P+ L+E G+ GN
Sbjct: 243 AVIDLNYS-EKTLSVYPKALAKQGKYVMVGLFGADLHYHA-PLITLSEIQFVGSLVGN-- 298
Query: 302 PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYM 340
++D + M + + +++ IT + E N+A + +
Sbjct: 299 -QSDFLGI--MRLAEAGKVKPMITKTMKLEEANEAIDNL 334
>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|B Chain B, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|C Chain C, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|D Chain D, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|E Chain E, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|H Chain H, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
Length = 347
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 69/339 (20%), Positives = 130/339 (38%), Gaps = 28/339 (8%)
Query: 18 EAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQTPL-------FPRIFG 69
E GKPL +Q++ V P+ +V IK++ +C +D++ + + G + P G
Sbjct: 8 EIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLG 67
Query: 70 HXXXXXXXXXXXXXXXXXXXXHV-LPVFTGECGDCRHCRFS---INGEPVNHFLGTS--- 122
H V + GE G+C +CR + P +LG +
Sbjct: 68 HEIAGKIEEVGDEVVGYSKGDLVAVNPLQGE-GNCYYCRIGEEHLCDSP--RWLGINFDG 124
Query: 123 TFSEYTVV-HSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERXXXXXXXXXXXX 181
++EY +V H + K+ L ++ + G++T P +
Sbjct: 125 AYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTK-TLLVVGAGGGL 183
Query: 182 XXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVD 241
VD + E AK+ G +N S D P+ E+ + GVD
Sbjct: 184 GTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQD-PLAEIRRITESKGVD 242
Query: 242 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK 301
++ + + +S + G V+VG+ D + P+ L+E G+ GN
Sbjct: 243 AVIDLNYS-EKTLSVYPKALAKQGKYVMVGLFGADLHYHA-PLITLSEIQFVGSLVGN-- 298
Query: 302 PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYM 340
++D + M + + +++ IT + E N+A + +
Sbjct: 299 -QSDFLGI--MRLAEAGKVKPMITKTMKLEEANEAIDNL 334
>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|B Chain B, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|C Chain C, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|D Chain D, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
Length = 347
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/342 (19%), Positives = 123/342 (35%), Gaps = 17/342 (4%)
Query: 10 TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL-FPRIF 68
T K + +E+ L +D+ V P+A E+ I +KY+ +C TDL+ W P+ P +
Sbjct: 5 TQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVG 64
Query: 69 GHXXXXXXXXXXXXXXXXXXXXHV-LPVFTGECGDCRHCRFSINGE----PVNHFLGTST 123
GH + + G C C +C ++ + +
Sbjct: 65 GHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGS 124
Query: 124 FSEYTVVHSGCVAKINPLAPLDKVC-ILSCGVSTGLGATLNVAKPERXXXXXXXXXXXXX 182
F +Y + A I L +V IL G++ + L A
Sbjct: 125 FQQYATADAVQAAHIPQGTDLAQVAPILCAGIT--VYKALKSANLMAGHWVAISGAAGGL 182
Query: 183 XXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDR 242
+D + E + G F++ ++ ++ I + + T+GG
Sbjct: 183 GSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTK-EKDIVGAVLKATDGGAHG 241
Query: 243 SVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP 302
+ + + + ++ V G VLVG+P+ V+ ++ G++ GN
Sbjct: 242 VINVSVSEAAIEASTRYVRAN-GTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGN--- 297
Query: 303 RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE 344
R D +D + L K + S + + +E M KG+
Sbjct: 298 RADTREALDFFARG---LVKSPIKVVGLSTLPEIYEKMEKGQ 336
>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx
pdb|3S1L|B Chain B, Crystal Structure Of Apo-Form Furx
pdb|3S1L|C Chain C, Crystal Structure Of Apo-Form Furx
pdb|3S1L|D Chain D, Crystal Structure Of Apo-Form Furx
pdb|3S2E|A Chain A, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|B Chain B, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|C Chain C, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|D Chain D, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|E Chain E, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|F Chain F, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|G Chain G, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|H Chain H, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2F|A Chain A, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|B Chain B, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|C Chain C, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|D Chain D, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|E Chain E, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|F Chain F, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|G Chain G, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|H Chain H, Crystal Structure Of Furx Nadh:furfural
pdb|3S2G|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2I|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
Length = 340
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 41/100 (41%), Gaps = 8/100 (8%)
Query: 12 KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYF----WESKGQTPLFPRI 67
KAAV G PL I +V V P +V++KI+ + +C TDL+ W K P P I
Sbjct: 4 KAAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVK---PTLPFI 60
Query: 68 FGHXXXXXXXXXXXXXXXXXXXXHV-LPVFTGECGDCRHC 106
GH V +P CG C HC
Sbjct: 61 PGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHC 100
>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|B Chain B, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|C Chain C, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|D Chain D, Human SdhNADHINHIBITOR COMPLEX
Length = 356
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 17/153 (11%)
Query: 201 DRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGV----DRSVECTGNIDNMISA 256
D S+ R +AK+ G D V + P QE IA G + + ++ECTG ++ +
Sbjct: 203 DLSATRLSKAKEIG-ADLVLQISKESP-QE-IARKVEGQLGCKPEVTIECTGAEASIQAG 259
Query: 257 FECVHDGWGVAVLVGVPSKDAVFMTKPI--NVLNERTLKGTFFGNYKPRTDLPSVVDMYM 314
G G VLVG+ S+ T P+ + E +KG F + P +
Sbjct: 260 IYATRSG-GTLVLVGLGSEX---TTVPLLHAAIREVDIKGVF----RYCNTWPVAISXLA 311
Query: 315 NKQLELEKFITHRIPFSEINKAFEYMVKGEGLR 347
+K + ++ +THR P + +AFE KG GL+
Sbjct: 312 SKSVNVKPLVTHRFPLEKALEAFETFKKGLGLK 344
>pdb|1YKF|A Chain A, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|B Chain B, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|C Chain C, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|D Chain D, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1BXZ|A Chain A, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|B Chain B, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|C Chain C, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|D Chain D, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
Length = 352
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 10/138 (7%)
Query: 208 EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGV 266
+ AK +G TD VN D PI+ I +T G GVD ++ GN D M +A + V G G
Sbjct: 205 DAAKYYGATDIVNYK--DGPIESQIMNLTEGKGVDAAIIAGGNADIMATAVKIVKPG-GT 261
Query: 267 AVLVGVPSKDAVFMTKPINV---LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKF 323
V + V + + +T+KG + R + ++D+ K+++ K
Sbjct: 262 IANVNYFGEGEVLPVPRLEWGCGMAHKTIKGGLCPGGRLRME--RLIDLVFYKRVDPSKL 319
Query: 324 ITHRI-PFSEINKAFEYM 340
+TH F I KAF M
Sbjct: 320 VTHVFRGFDNIEKAFMLM 337
>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|B Chain B, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|C Chain C, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
Length = 347
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 128/345 (37%), Gaps = 35/345 (10%)
Query: 27 DVEVAPPQAMEVRIKIKYTSLCRTDL--YFWESKGQTPLF-PRIFGHXXXXXXXXXXXXX 83
+V+V P EV IK+ TS+C TDL Y W Q+ + P+I GH
Sbjct: 20 EVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGV 79
Query: 84 XXXXXXXHV---LPVFTGECGDCRHCRFSINGEPVNHFLGTST---FSEYTVVHSGCVAK 137
+V + G+C CR ++ + G T F+EY VV + + K
Sbjct: 80 EGIEVGDYVSVETHIVCGKCYACRRGQYHVCQN--TKIFGVDTDGVFAEYAVVPAQNIWK 137
Query: 138 INPLAPLDKVCILSCGVSTGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXX 197
NP + + L + + L A P
Sbjct: 138 -NPKSIPPEYATLQEPLGNAVDTVL--AGPISGKSVLITGAGPLGLLGIAVAKASGAYPV 194
Query: 198 XXVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISA 256
+ S R E AKK G +N E D + + + ++T+G GVD +E +G +
Sbjct: 195 IVSEPSDFRRELAKKVGADYVINPFEED--VVKEVXDITDGNGVDVFLEFSGAPKALEQG 252
Query: 257 FECVHDGWGVAVLVGVPSKDA-------VFMTKPINVLNERTLKGTFFGNYKPRTDLPSV 309
+ V V++L P K +F I + R L T++ +V
Sbjct: 253 LQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWY----------TV 302
Query: 310 VDMYMNKQLELEKFITHRIP-FSEINKAFEYMVKGEGLRCIISME 353
+ + +L L+ ITH+ F + +AFE G+ + + ++
Sbjct: 303 SRLLQSGKLNLDPIITHKYKGFDKYEEAFELXRAGKTGKVVFXLK 347
>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3
Length = 348
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 128/345 (37%), Gaps = 35/345 (10%)
Query: 27 DVEVAPPQAMEVRIKIKYTSLCRTDL--YFWESKGQTPLF-PRIFGHXXXXXXXXXXXXX 83
+V+V P EV IK+ TS+C TDL Y W Q+ + P+I GH
Sbjct: 21 EVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGV 80
Query: 84 XXXXXXXHV---LPVFTGECGDCRHCRFSINGEPVNHFLGTST---FSEYTVVHSGCVAK 137
+V + G+C CR ++ + G T F+EY VV + + K
Sbjct: 81 EGIEVGDYVSVETHIVCGKCYACRRGQYHVCQN--TKIFGVDTDGVFAEYAVVPAQNIWK 138
Query: 138 INPLAPLDKVCILSCGVSTGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXX 197
NP + + L + + L A P
Sbjct: 139 -NPKSIPPEYATLQEPLGNAVDTVL--AGPISGKSVLITGAGPLGLLGIAVAKASGAYPV 195
Query: 198 XXVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISA 256
+ S R E AKK G +N E D + + + ++T+G GVD +E +G +
Sbjct: 196 IVSEPSDFRRELAKKVGADYVINPFEED--VVKEVXDITDGNGVDVFLEFSGAPKALEQG 253
Query: 257 FECVHDGWGVAVLVGVPSKDA-------VFMTKPINVLNERTLKGTFFGNYKPRTDLPSV 309
+ V V++L P K +F I + R L T++ +V
Sbjct: 254 LQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWY----------TV 303
Query: 310 VDMYMNKQLELEKFITHRIP-FSEINKAFEYMVKGEGLRCIISME 353
+ + +L L+ ITH+ F + +AFE G+ + + ++
Sbjct: 304 SRLLQSGKLNLDPIITHKYKGFDKYEEAFELXRAGKTGKVVFXLK 348
>pdb|2NVB|A Chain A, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|B Chain B, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|C Chain C, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|D Chain D, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
Length = 352
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 10/138 (7%)
Query: 208 EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGV 266
+ AK +G TD VN D PI+ I +T G GVD ++ GN D M +A + V G G
Sbjct: 205 DAAKYYGATDIVNYK--DGPIESQIMNLTEGKGVDAAIIAGGNADIMATAVKIVKPG-GT 261
Query: 267 AVLVGVPSKDAVFMTKPINV---LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKF 323
V + V + + +T+KG + R + ++D+ K+++ K
Sbjct: 262 IANVNYFGEGEVLDVPRLEWGCGMAHKTIKGGLCPGGRLRME--RLIDLVFYKRVDPSKL 319
Query: 324 ITHRI-PFSEINKAFEYM 340
+TH F I KAF M
Sbjct: 320 VTHVFRGFDNIEKAFMLM 337
>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|B Chain B, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|C Chain C, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|D Chain D, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 121/333 (36%), Gaps = 29/333 (8%)
Query: 27 DVEVAPPQAMEVRIKIKYTSLCRTDL--YFWESKGQTPLF-PRIFGHXXXXXXXXXXXXX 83
+V+V P EV IK+ TS+C TDL Y W Q+ + P+I GH
Sbjct: 21 EVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEVGPGV 80
Query: 84 XXXXXXXHV---LPVFTGECGDCRHCRFSI-NGEPVNHFLGTSTFSEYTVVHSGCVAKIN 139
++ + G+C C+H R+ + + F+ Y +V + K N
Sbjct: 81 EDLQVGDYISVETHIVCGKCYACKHNRYHVCQNTKIFGVDMDGVFAHYAIVPAKNAWK-N 139
Query: 140 PLAPLDKVCILSCGVSTGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 199
P + L + + L A P
Sbjct: 140 PKDMPPEYAALQEPLGNAVDTVL--AGPIAGRSTLITGAGPLGLLGIAVAKASGAYPVIV 197
Query: 200 VDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFEC 259
+ S R + AKK G VN E D P++ V+ GV+ +E +G + +
Sbjct: 198 SEPSEFRRKLAKKVGADYVVNPFEED-PVKFVMDITDGAGVEVFLEFSGAPKALEQGLKA 256
Query: 260 VHDGWGVAVLVGVPSKDA-------VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDM 312
V G V++L P + +F ++ + R L T++ +V +
Sbjct: 257 VTPGGRVSLLGLFPREVTIDFNNLIIFKALEVHGITGRHLWETWY----------TVSSL 306
Query: 313 YMNKQLELEKFITHRIP-FSEINKAFEYMVKGE 344
+ +L L+ ITH+ F + +AFE M G+
Sbjct: 307 IQSGKLNLDPIITHKYKGFDKFEEAFELMRAGK 339
>pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of C. Beijerinckii
Adh By T. Brockii Adh
Length = 351
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 63/138 (45%), Gaps = 10/138 (7%)
Query: 208 EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGV 266
+ AK +G TD VN D PI+ I +T G GVD ++ GN D M +A + V G G
Sbjct: 205 DAAKYYGATDIVNYK--DGPIESQIMNLTEGKGVDAAIIAGGNADIMATAVKIVKPG-GT 261
Query: 267 AVLVGVPSKDAVFMTKPINV---LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKF 323
V + V + + +T+KG + R ++ + DM + +++L K
Sbjct: 262 IANVNYFGEGEVLPVPRLEWGCGMAHKTIKGGLCPGGRLRAEM--LRDMVVYNRVDLSKL 319
Query: 324 ITHRI-PFSEINKAFEYM 340
+TH F I +A M
Sbjct: 320 VTHVYHGFDHIEEALLLM 337
>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus
Solfataricus
Length = 347
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 111/298 (37%), Gaps = 23/298 (7%)
Query: 18 EAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQTPL-------FPRIFG 69
E GKPL +Q++ V P+ +V IK++ +C +D++ + + G + P G
Sbjct: 8 EIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHXRQGRFGNLRIVEDLGVKLPVTLG 67
Query: 70 HXXXXXXXXXXXXXXXXXXXXHV-LPVFTGECGDCRHCRFS---INGEPVNHFLGTS--- 122
H V + + GE G+C +CR + P +LG +
Sbjct: 68 HEIAGKIEEVGDEVVGYSKGDLVAVNPWQGE-GNCYYCRIGEEHLCDSP--RWLGINFDG 124
Query: 123 TFSEYTVV-HSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERXXXXXXXXXXXX 181
++EY +V H K+ L ++ + G++T P +
Sbjct: 125 AYAEYVIVPHYKYXYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTK-TLLVVGAGGGL 183
Query: 182 XXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVD 241
VD + E AK+ G +N S D P+ E+ + GVD
Sbjct: 184 GTXAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQD-PLAEIRRITESKGVD 242
Query: 242 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN 299
++ N + +S + G V VG+ D + P+ L+E G+ GN
Sbjct: 243 AVIDLN-NSEKTLSVYPKALAKQGKYVXVGLFGADLHYHA-PLITLSEIQFVGSLVGN 298
>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
pdb|4EJM|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
Bound To Nadp
Length = 370
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 202 RSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAE---MTNGGVDRSVECTGNIDNMISAFE 258
R + + A++ G T V+ S D + E IA + GGVD +EC G + + +
Sbjct: 215 RQATKRRLAEEVGATATVDPSAGD--VVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTR 272
Query: 259 CVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKPRTDLPSVVDMYMNKQ 317
G V +L +P + V + +P ++L E + G+F + R D+
Sbjct: 273 LAKAGGTVVILGVLPQGEKVEI-EPFDILFRELRVLGSFINPFVHR----RAADLVATGA 327
Query: 318 LELEKFITHRIPFSE 332
+E+++ I+ RI E
Sbjct: 328 IEIDRXISRRISLDE 342
>pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|B Chain B, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|C Chain C, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|D Chain D, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
Length = 352
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 208 EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGV 266
E AK +G TD +N + I + + ++TNG GVDR + G + + A + V G +
Sbjct: 205 EAAKFYGATDILNYK--NGHIVDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGII 262
Query: 267 AVLVGVPSKDAVFMTKPIN--VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFI 324
+ + S DA+ + + + +T+KG + R + ++D+ K+++ K +
Sbjct: 263 SNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRLRME--RLIDLVFYKRVDPSKLV 320
Query: 325 THRI-PFSEINKAFEYM 340
TH F I KAF M
Sbjct: 321 THVFRGFDNIEKAFMLM 337
>pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|B Chain B, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|C Chain C, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|D Chain D, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
Length = 352
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 208 EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGV 266
E AK +G TD +N + I + + ++TNG GVDR + G + + A V G +
Sbjct: 205 EAAKFYGATDILNYK--NGHIVDQVMKLTNGKGVDRVIMAGGGSETLSQAVSMVKPGGII 262
Query: 267 AVLVGVPSKDAVFMTKPIN--VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFI 324
+ + S DA+ + + + +T+KG + R + ++D+ K+++ K +
Sbjct: 263 SNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRLRME--RLIDLVFYKRVDPSKLV 320
Query: 325 THRI-PFSEINKAFEYM 340
TH F I KAF M
Sbjct: 321 THVFRGFDNIEKAFMLM 337
>pdb|1UUF|A Chain A, Crystal Structure Of A Zinc-Type Alcohol
Dehydrogenase-Like Protein Yahk
Length = 369
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 9 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIF 68
L KA A+ A +PL D+ P +V+I+I Y +C +DL+ S+ ++P +
Sbjct: 21 LKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVP 80
Query: 69 GH 70
GH
Sbjct: 81 GH 82
>pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|B Chain B, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|C Chain C, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|D Chain D, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1KEV|A Chain A, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|B Chain B, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|C Chain C, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|D Chain D, Structure Of Nadp-Dependent Alcohol Dehydrogenase
Length = 351
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 208 EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGV 266
E AK +G TD +N + I + + ++TNG GVDR + G + + A V G +
Sbjct: 205 EAAKFYGATDILNYK--NGHIVDQVMKLTNGKGVDRVIMAGGGSETLSQAVSMVKPGGII 262
Query: 267 AVLVGVPSKDAVFMTKPIN--VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFI 324
+ + S DA+ + + + +T+KG + R ++ + DM + +++L K +
Sbjct: 263 SNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRLRAEM--LRDMVVYNRVDLSKLV 320
Query: 325 THRI-PFSEINKAFEYM 340
TH F I +A M
Sbjct: 321 THVYHGFDHIEEALLLM 337
>pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|B Chain B, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|C Chain C, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|D Chain D, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
Length = 351
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 208 EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGV 266
E AK +G TD +N + I + + ++TNG GVDR + G + + A V G +
Sbjct: 205 EAAKFYGATDILNYK--NGHIVDQVMKLTNGKGVDRVIMAGGGSETLSQAVSMVKPGGII 262
Query: 267 AVLVGVPSKDAVFMTKPIN--VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFI 324
+ + S DA+ + + + +T+KG + R ++ + DM + +++L K +
Sbjct: 263 SNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRLRAEM--LRDMVVYNRVDLSKLV 320
Query: 325 THRI-PFSEINKAFEYM 340
TH F I +A M
Sbjct: 321 THVYHGFDHIEEALLLM 337
>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
pdb|4A2C|B Chain B, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
Length = 346
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 108/317 (34%), Gaps = 31/317 (9%)
Query: 37 EVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVF 96
EVR+KI + LC +DL G +P GH V V
Sbjct: 27 EVRVKIASSGLCGSDLPRIFKNG-AHYYPITLGHEFSGYIDAVGSGVDDLHPGDAVACVP 85
Query: 97 TGECGDCRHCRFSINGEPVNH-FLGT---STFSEYTVVHSGCVAKINPLAPLDKVCILSC 152
C C C + + F+G+ F+EY VV V + P++ +
Sbjct: 86 LLPCFTCPECLKGFYSQCAKYDFIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIE- 144
Query: 153 GVSTGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKK 212
++ GL A ++A+ +D SS++ AK
Sbjct: 145 PITVGLHA-FHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKS 203
Query: 213 FGVTDFVNTSEHDRP-IQEVIAE-------MTNGGVDRSVECTGNIDNMISAFECVHDGW 264
FG N+SE P +Q V+ E + GV ++VE I +
Sbjct: 204 FGAMQTFNSSEMSAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPHAQL------- 256
Query: 265 GVAVLVGVPSKDAVFMTKPINVL--NERTLKGTFFGNYK---PRTDLPSVVDMYMNKQLE 319
LVG +D + + E T+ G++ NY P + + + ++L
Sbjct: 257 ---ALVGTLHQDLHLTSATFGKILRKELTVIGSWM-NYSSPWPGQEWETASRLLTERKLS 312
Query: 320 LEKFITHRIPFSEINKA 336
LE I HR F +A
Sbjct: 313 LEPLIAHRGSFESFAQA 329
>pdb|3M6I|A Chain A, L-Arabinitol 4-Dehydrogenase
pdb|3M6I|B Chain B, L-Arabinitol 4-Dehydrogenase
Length = 363
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
Query: 238 GGVDRSV--ECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGT 295
GG++ +V ECTG ++ +A V G G ++GV + + P + R +
Sbjct: 249 GGIEPAVALECTGVESSIAAAIWAVKFG-GKVFVIGVGKNE---IQIPFMRASVREVDLQ 304
Query: 296 FFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFE 338
F Y+ P + + N ++L + +THR P + KAFE
Sbjct: 305 F--QYRYCNTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFE 345
>pdb|1H2B|A Chain A, Crystal Structure Of The Alcohol Dehydrogenase From The
Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a
Resolution
pdb|1H2B|B Chain B, Crystal Structure Of The Alcohol Dehydrogenase From The
Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a
Resolution
Length = 359
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 136/360 (37%), Gaps = 47/360 (13%)
Query: 11 CKAAVAWEAGKPLIIQDVEVAPPQA-MEVRIKIKYTSLCRTDLYF----WESKGQTPLFP 65
KAA E KPL I+DV+ + +V ++I +C TDL+ W Q P P
Sbjct: 16 LKAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQ-PKLP 74
Query: 66 RIFGHXXXXXXXXXXXXXXXXXXXXHVL--PVFT-GECGDCR-----HCR------FSIN 111
GH V+ P T G C CR HC +I+
Sbjct: 75 YTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNID 134
Query: 112 GEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERX- 170
G F+E+ V K+ +K+ ++ G+ A V K R
Sbjct: 135 G----------GFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTL 184
Query: 171 ---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDRP 227
+D ++ + A++ G D V + D P
Sbjct: 185 YPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLG-ADHVVDARRD-P 242
Query: 228 IQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV 286
+++V+ E+T G GV+ +++ G+ + + G ++VG + + I+
Sbjct: 243 VKQVM-ELTRGRGVNVAMDFVGS-QATVDYTPYLLGRMGRLIIVGYGGELRFPTIRVIS- 299
Query: 287 LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 346
+E + +G+ GNY +L +V + + ++ +E I H++ EIN E + KGE L
Sbjct: 300 -SEVSFEGSLVGNY---VELHELVTLALQGKVRVEVDI-HKL--DEINDVLERLEKGEVL 352
>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf
Whitefly
Length = 352
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 63/146 (43%), Gaps = 13/146 (8%)
Query: 202 RSSKRFEEAKKFG--VTDFVNTS-EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFE 258
RS +R E AK G VT V+ + E + I E I + +++C+GN +
Sbjct: 200 RSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGIN 259
Query: 259 CVHDGWGVAVLVGVPSKDAVFMTKPI--NVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 316
G G +LVG+ S+ +T P+ E +K F + D P ++M +
Sbjct: 260 ITRTG-GTLMLVGMGSQ---MVTVPLVNACAREIDIKSVF----RYCNDYPIALEMVASG 311
Query: 317 QLELEKFITHRIPFSEINKAFEYMVK 342
+ +++ +TH + AFE K
Sbjct: 312 RCNVKQLVTHSFKLEQTVDAFEAARK 337
>pdb|2XFC|A Chain A, The Chikungunya E1 E2 Envelope Glycoprotein Complex Fit
Into The Semliki Forest Virus Cryo-Em Map
pdb|2XFC|D Chain D, The Chikungunya E1 E2 Envelope Glycoprotein Complex Fit
Into The Semliki Forest Virus Cryo-Em Map
pdb|2XFC|F Chain F, The Chikungunya E1 E2 Envelope Glycoprotein Complex Fit
Into The Semliki Forest Virus Cryo-Em Map
pdb|2XFC|H Chain H, The Chikungunya E1 E2 Envelope Glycoprotein Complex Fit
Into The Semliki Forest Virus Cryo-Em Map
Length = 439
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 297 FGNYKPRTDLPSVVDMYMNKQLELEKFI--THRIPFSEINKAFEYMVKGEG 345
FG+ + RT P D+Y N QL L++ T +P+S+ F+Y +K G
Sbjct: 200 FGDIQSRT--PESKDVYANTQLVLQRPAAGTVHVPYSQAPSGFKYWLKERG 248
>pdb|3N41|F Chain F, Crystal Structure Of The Mature Envelope Glycoprotein
Complex (Spontaneous Cleavage) Of Chikungunya Virus.
pdb|3N42|F Chain F, Crystal Structures Of The Mature Envelope Glycoprotein
Complex (Furin Cleavage) Of Chikungunya Virus.
pdb|3N43|F Chain F, Crystal Structures Of The Mature Envelope Glycoprotein
Complex (Trypsin Cleavage) Of Chikungunya Virus.
pdb|3N44|F Chain F, Crystal Structure Of The Mature Envelope Glycoprotein
Complex (Trypsin Cleavage; Osmium Soak) Of Chikungunya
Virus
Length = 473
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 297 FGNYKPRTDLPSVVDMYMNKQLELEKFI--THRIPFSEINKAFEYMVKGEG 345
FG+ + RT P D+Y N QL L++ T +P+S+ F+Y +K G
Sbjct: 222 FGDIQSRT--PESKDVYANTQLVLQRPAAGTVHVPYSQAPSGFKYWLKERG 270
>pdb|2XFB|A Chain A, The Chikungunya E1 E2 Envelope Glycoprotein Complex Fit
Into The Sindbis Virus Cryo-Em Map
pdb|2XFB|D Chain D, The Chikungunya E1 E2 Envelope Glycoprotein Complex Fit
Into The Sindbis Virus Cryo-Em Map
pdb|2XFB|F Chain F, The Chikungunya E1 E2 Envelope Glycoprotein Complex Fit
Into The Sindbis Virus Cryo-Em Map
pdb|2XFB|H Chain H, The Chikungunya E1 E2 Envelope Glycoprotein Complex Fit
Into The Sindbis Virus Cryo-Em Map
Length = 391
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 297 FGNYKPRTDLPSVVDMYMNKQLELEKFI--THRIPFSEINKAFEYMVKGEG 345
FG+ + RT P D+Y N QL L++ T +P+S+ F+Y +K G
Sbjct: 200 FGDIQSRT--PESKDVYANTQLVLQRPAAGTVHVPYSQAPSGFKYWLKERG 248
>pdb|3N40|F Chain F, Crystal Structure Of The Immature Envelope Glycoprotein
Complex Of Chikungunya Virus
Length = 393
Score = 32.3 bits (72), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 297 FGNYKPRTDLPSVVDMYMNKQLELEKFI--THRIPFSEINKAFEYMVKGEG 345
FG+ + RT P D+Y N QL L++ T +P+S+ F+Y +K G
Sbjct: 202 FGDIQSRT--PESKDVYANTQLVLQRPAAGTVHVPYSQAPSGFKYWLKERG 250
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 16/91 (17%)
Query: 200 VDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE-CTGNIDNMISAF- 257
V R + F+ A+ G F++ +H R + V A T GV+R E G +D ++ A
Sbjct: 79 VTRLAPHFKPAR--GAVGFLDPPDHTRLRRSVAAAFTARGVERVRERSRGMLDELVDAML 136
Query: 258 ---------ECVHDGWGVAV---LVGVPSKD 276
E V + +AV L+GVP+ D
Sbjct: 137 RAGPPADLTEAVLSPFPIAVICELMGVPATD 167
>pdb|3IEE|A Chain A, Crystal Structure Of Hypothetical Protein Bf3319 From
Bacteroides Fragilis (Yp_212931.1) From Bacteroides
Fragilis Nctc 9343 At 1.70 A Resolution
Length = 270
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 271 GVPSKDAVFMTKPINVLNE---RTLKGTFFGNYKPRTDLPSVVDMYMN 315
V SKD+ + P N NE R LK + G ++ RT+ + D Y++
Sbjct: 69 AVVSKDSAIVLNPGNCFNEETRRNLKQNYTGLFQARTEFYANFDTYLS 116
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 16/91 (17%)
Query: 200 VDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE-CTGNIDNMISAF- 257
V R + F A+ G F++ +H R + V A T GV+R E G +D ++ A
Sbjct: 79 VTRLAPHFRPAR--GAVGFLDPPDHTRLRRSVAAAFTARGVERVRERSRGMLDELVDAML 136
Query: 258 ---------ECVHDGWGVAV---LVGVPSKD 276
E V + +AV L+GVP+ D
Sbjct: 137 RAGPPADLTEAVLSPFPIAVICELMGVPATD 167
>pdb|4IPA|A Chain A, Structure Of A Thermophilic Arx1
pdb|4IPA|B Chain B, Structure Of A Thermophilic Arx1
pdb|4IPA|C Chain C, Structure Of A Thermophilic Arx1
pdb|4IPA|D Chain D, Structure Of A Thermophilic Arx1
Length = 423
Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 208 EEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDN 252
E KKFG F + E +R + + E GGV R E TG+ DN
Sbjct: 294 EVQKKFGTFPFSLRQLEDERDAKSGVIECVRGGVFRQYEVTGDKDN 339
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,073,770
Number of Sequences: 62578
Number of extensions: 333130
Number of successful extensions: 875
Number of sequences better than 100.0: 74
Number of HSP's better than 100.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 705
Number of HSP's gapped (non-prelim): 89
length of query: 354
length of database: 14,973,337
effective HSP length: 100
effective length of query: 254
effective length of database: 8,715,537
effective search space: 2213746398
effective search space used: 2213746398
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)