Query 018529
Match_columns 354
No_of_seqs 147 out of 1552
Neff 10.1
Searched_HMMs 46136
Date Fri Mar 29 09:46:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018529.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018529hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1064 AdhP Zn-dependent alco 100.0 8E-66 1.7E-70 447.9 31.9 331 8-353 1-338 (339)
2 COG1062 AdhC Zn-dependent alco 100.0 3.3E-64 7.2E-69 427.7 31.4 341 9-352 1-366 (366)
3 KOG0022 Alcohol dehydrogenase, 100.0 3E-62 6.4E-67 408.9 30.8 347 6-352 3-375 (375)
4 KOG0024 Sorbitol dehydrogenase 100.0 1.1E-60 2.4E-65 402.6 30.9 338 9-354 3-354 (354)
5 PLN02740 Alcohol dehydrogenase 100.0 1.1E-56 2.4E-61 413.7 35.5 348 5-352 5-381 (381)
6 KOG0023 Alcohol dehydrogenase, 100.0 1E-56 2.2E-61 377.7 30.0 335 5-353 4-355 (360)
7 TIGR02818 adh_III_F_hyde S-(hy 100.0 1.5E-55 3.2E-60 404.3 35.4 342 11-352 2-368 (368)
8 TIGR03451 mycoS_dep_FDH mycoth 100.0 4.1E-55 8.9E-60 400.5 35.5 338 10-351 1-357 (358)
9 cd08301 alcohol_DH_plants Plan 100.0 4.2E-55 9.1E-60 402.2 35.2 342 9-350 1-368 (369)
10 cd08281 liver_ADH_like1 Zinc-d 100.0 5.6E-55 1.2E-59 401.3 35.7 336 11-350 1-370 (371)
11 cd08300 alcohol_DH_class_III c 100.0 9.2E-55 2E-59 399.4 35.7 342 10-351 2-368 (368)
12 PLN02827 Alcohol dehydrogenase 100.0 4E-54 8.7E-59 395.5 35.2 342 9-353 11-377 (378)
13 cd08239 THR_DH_like L-threonin 100.0 3.7E-53 8E-58 385.3 34.3 332 11-352 1-339 (339)
14 cd08277 liver_alcohol_DH_like 100.0 5.8E-53 1.3E-57 387.1 35.3 341 9-351 1-365 (365)
15 COG0604 Qor NADPH:quinone redu 100.0 1.2E-52 2.6E-57 374.8 30.6 315 11-352 1-326 (326)
16 PRK09880 L-idonate 5-dehydroge 100.0 5.5E-52 1.2E-56 377.6 33.6 328 8-352 2-343 (343)
17 COG1063 Tdh Threonine dehydrog 100.0 5.1E-51 1.1E-55 369.2 32.7 334 11-352 1-350 (350)
18 TIGR02819 fdhA_non_GSH formald 100.0 5E-51 1.1E-55 375.6 32.6 335 10-353 2-391 (393)
19 KOG1197 Predicted quinone oxid 100.0 1.7E-51 3.8E-56 334.1 24.0 317 6-353 4-331 (336)
20 PLN02586 probable cinnamyl alc 100.0 1.5E-50 3.2E-55 369.7 32.5 332 5-352 7-353 (360)
21 PRK10309 galactitol-1-phosphat 100.0 3E-49 6.6E-54 360.6 34.7 335 11-353 1-347 (347)
22 cd08230 glucose_DH Glucose deh 100.0 5.4E-49 1.2E-53 359.8 32.1 327 11-352 1-355 (355)
23 TIGR03201 dearomat_had 6-hydro 100.0 1E-48 2.2E-53 357.0 33.5 328 14-351 2-348 (349)
24 PLN02178 cinnamyl-alcohol dehy 100.0 7.4E-49 1.6E-53 359.5 31.9 324 13-352 9-348 (375)
25 cd08299 alcohol_DH_class_I_II_ 100.0 3.3E-48 7.1E-53 356.1 35.7 343 8-352 5-373 (373)
26 cd08231 MDR_TM0436_like Hypoth 100.0 8.1E-48 1.8E-52 353.1 35.2 337 12-352 2-361 (361)
27 TIGR02822 adh_fam_2 zinc-bindi 100.0 3.3E-48 7.1E-53 350.2 31.4 316 14-350 2-328 (329)
28 PLN02514 cinnamyl-alcohol dehy 100.0 7.1E-48 1.5E-52 352.0 32.7 329 10-354 9-352 (357)
29 cd08233 butanediol_DH_like (2R 100.0 1.4E-47 3.1E-52 350.1 34.5 330 11-351 1-351 (351)
30 cd08278 benzyl_alcohol_DH Benz 100.0 1E-46 2.2E-51 345.8 34.2 337 9-351 1-365 (365)
31 cd08238 sorbose_phosphate_red 100.0 5.2E-47 1.1E-51 352.3 32.7 331 9-352 1-368 (410)
32 cd05279 Zn_ADH1 Liver alcohol 100.0 2.2E-46 4.7E-51 343.6 34.8 339 11-351 1-365 (365)
33 cd08237 ribitol-5-phosphate_DH 100.0 3.3E-47 7.1E-52 345.6 28.0 320 9-353 1-340 (341)
34 cd08285 NADP_ADH NADP(H)-depen 100.0 1.3E-45 2.8E-50 337.3 35.2 335 11-352 1-351 (351)
35 cd08279 Zn_ADH_class_III Class 100.0 6.1E-45 1.3E-49 334.0 35.1 336 11-350 1-362 (363)
36 TIGR01202 bchC 2-desacetyl-2-h 100.0 1.1E-45 2.5E-50 330.8 29.4 303 10-351 1-308 (308)
37 PRK10083 putative oxidoreducta 100.0 3.4E-44 7.3E-49 326.5 34.8 330 11-354 1-339 (339)
38 cd08296 CAD_like Cinnamyl alco 100.0 2.4E-44 5.2E-49 326.4 33.3 326 11-351 1-333 (333)
39 cd08283 FDH_like_1 Glutathione 100.0 2.6E-44 5.7E-49 332.0 34.0 333 11-351 1-385 (386)
40 cd08256 Zn_ADH2 Alcohol dehydr 100.0 6.8E-44 1.5E-48 325.8 34.3 330 11-350 1-350 (350)
41 cd05278 FDH_like Formaldehyde 100.0 5.8E-44 1.2E-48 326.1 33.6 333 11-351 1-346 (347)
42 cd08291 ETR_like_1 2-enoyl thi 100.0 5.7E-44 1.2E-48 322.9 30.5 309 11-351 1-324 (324)
43 cd08263 Zn_ADH10 Alcohol dehyd 100.0 2E-43 4.3E-48 324.6 33.8 335 11-351 1-367 (367)
44 cd08286 FDH_like_ADH2 formalde 100.0 2.7E-43 5.8E-48 321.3 33.4 332 11-352 1-345 (345)
45 cd05284 arabinose_DH_like D-ar 100.0 5.6E-43 1.2E-47 318.7 33.7 328 11-352 1-340 (340)
46 cd08240 6_hydroxyhexanoate_dh_ 100.0 5.3E-43 1.1E-47 320.0 33.2 332 11-351 1-349 (350)
47 cd08260 Zn_ADH6 Alcohol dehydr 100.0 1.3E-42 2.8E-47 316.9 34.3 334 11-351 1-344 (345)
48 cd08246 crotonyl_coA_red croto 100.0 7.5E-43 1.6E-47 323.6 33.0 336 7-351 9-392 (393)
49 PLN02702 L-idonate 5-dehydroge 100.0 2.3E-42 5E-47 317.2 35.0 341 1-351 6-363 (364)
50 PLN03154 putative allyl alcoho 100.0 1E-42 2.2E-47 316.7 30.9 317 6-354 4-347 (348)
51 cd08284 FDH_like_2 Glutathione 100.0 2.7E-42 6E-47 314.6 33.7 331 11-351 1-343 (344)
52 cd08262 Zn_ADH8 Alcohol dehydr 100.0 3.5E-42 7.7E-47 313.5 33.5 324 11-351 1-341 (341)
53 PRK05396 tdh L-threonine 3-deh 100.0 9.5E-42 2E-46 310.6 34.6 333 11-353 1-341 (341)
54 cd08235 iditol_2_DH_like L-idi 100.0 1.2E-41 2.6E-46 310.3 34.2 332 11-351 1-343 (343)
55 cd08282 PFDH_like Pseudomonas 100.0 9.3E-42 2E-46 314.1 33.6 332 11-352 1-375 (375)
56 TIGR01751 crot-CoA-red crotony 100.0 7.8E-42 1.7E-46 316.9 33.0 338 7-353 4-388 (398)
57 cd08261 Zn_ADH7 Alcohol dehydr 100.0 2.1E-41 4.5E-46 307.9 35.0 329 11-352 1-337 (337)
58 cd08287 FDH_like_ADH3 formalde 100.0 1.2E-41 2.5E-46 310.6 33.1 330 11-351 1-344 (345)
59 cd08265 Zn_ADH3 Alcohol dehydr 100.0 3.5E-41 7.5E-46 311.1 34.3 332 11-350 29-383 (384)
60 cd08292 ETR_like_2 2-enoyl thi 100.0 2.1E-41 4.5E-46 306.3 31.2 309 11-351 1-324 (324)
61 cd08242 MDR_like Medium chain 100.0 3.3E-41 7.2E-46 304.3 32.3 312 11-351 1-318 (319)
62 cd08295 double_bond_reductase_ 100.0 1.4E-41 3.1E-46 308.9 29.4 311 10-352 7-338 (338)
63 cd05283 CAD1 Cinnamyl alcohol 100.0 3.8E-41 8.2E-46 306.0 31.4 323 12-351 1-337 (337)
64 PRK09422 ethanol-active dehydr 100.0 7.1E-41 1.5E-45 304.6 33.0 328 11-352 1-336 (338)
65 PRK13771 putative alcohol dehy 100.0 3.9E-41 8.5E-46 305.8 30.2 325 11-352 1-333 (334)
66 cd05285 sorbitol_DH Sorbitol d 100.0 1E-40 2.2E-45 304.0 33.0 328 13-350 1-341 (343)
67 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 1.3E-40 2.7E-45 302.9 33.3 330 11-352 1-338 (338)
68 cd05281 TDH Threonine dehydrog 100.0 1.8E-40 3.8E-45 302.2 34.3 332 11-351 1-340 (341)
69 cd08236 sugar_DH NAD(P)-depend 100.0 3.7E-40 8.1E-45 300.4 34.1 332 11-350 1-343 (343)
70 cd08293 PTGR2 Prostaglandin re 100.0 2.4E-40 5.3E-45 301.9 32.2 299 23-352 23-345 (345)
71 cd08294 leukotriene_B4_DH_like 100.0 1.1E-40 2.4E-45 302.2 29.6 304 10-352 2-329 (329)
72 cd08232 idonate-5-DH L-idonate 100.0 4.2E-40 9.2E-45 299.6 32.9 324 15-352 2-339 (339)
73 KOG0025 Zn2+-binding dehydroge 100.0 1E-40 2.2E-45 276.2 25.8 319 6-353 15-353 (354)
74 TIGR00692 tdh L-threonine 3-de 100.0 8.2E-40 1.8E-44 297.7 33.7 328 17-352 5-340 (340)
75 TIGR03366 HpnZ_proposed putati 100.0 2.9E-41 6.2E-46 298.5 23.3 258 67-333 1-280 (280)
76 TIGR02825 B4_12hDH leukotriene 100.0 2.3E-40 4.9E-45 299.5 29.3 290 23-350 19-324 (325)
77 cd08234 threonine_DH_like L-th 100.0 1.4E-39 3.1E-44 295.5 34.3 328 11-350 1-333 (334)
78 cd08297 CAD3 Cinnamyl alcohol 100.0 2.5E-39 5.5E-44 294.7 34.3 330 11-352 1-341 (341)
79 cd08274 MDR9 Medium chain dehy 100.0 9.8E-40 2.1E-44 298.5 30.9 322 11-351 1-349 (350)
80 cd08259 Zn_ADH5 Alcohol dehydr 100.0 2.6E-39 5.7E-44 293.5 32.5 325 11-351 1-332 (332)
81 TIGR02817 adh_fam_1 zinc-bindi 100.0 6.1E-39 1.3E-43 291.6 30.3 308 12-351 1-334 (336)
82 cd08264 Zn_ADH_like2 Alcohol d 100.0 6.4E-39 1.4E-43 290.2 30.3 314 11-346 1-321 (325)
83 cd08290 ETR 2-enoyl thioester 100.0 4.8E-39 1E-43 292.9 29.5 314 11-352 1-341 (341)
84 PRK10754 quinone oxidoreductas 100.0 3.6E-39 7.8E-44 292.0 28.1 314 10-351 1-326 (327)
85 cd08298 CAD2 Cinnamyl alcohol 100.0 1.2E-38 2.7E-43 288.7 31.1 319 11-350 1-329 (329)
86 cd08266 Zn_ADH_like1 Alcohol d 100.0 3E-38 6.4E-43 287.5 32.3 330 11-351 1-341 (342)
87 cd08245 CAD Cinnamyl alcohol d 100.0 2.3E-38 4.9E-43 287.2 31.3 323 12-350 1-330 (330)
88 cd08244 MDR_enoyl_red Possible 100.0 5E-38 1.1E-42 284.2 31.9 312 11-352 1-324 (324)
89 cd08276 MDR7 Medium chain dehy 100.0 1.2E-37 2.6E-42 283.0 33.5 330 11-352 1-336 (336)
90 cd08250 Mgc45594_like Mgc45594 100.0 3.3E-38 7.1E-43 286.0 29.5 311 10-351 1-329 (329)
91 cd08258 Zn_ADH4 Alcohol dehydr 100.0 8.2E-38 1.8E-42 280.1 31.3 296 11-316 1-306 (306)
92 KOG1198 Zinc-binding oxidoredu 100.0 1.2E-38 2.5E-43 284.7 24.7 302 23-354 20-347 (347)
93 PTZ00354 alcohol dehydrogenase 100.0 1.7E-37 3.7E-42 281.8 31.5 314 10-353 1-329 (334)
94 cd08249 enoyl_reductase_like e 100.0 1.2E-37 2.5E-42 283.3 29.4 315 11-352 1-339 (339)
95 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 3E-37 6.5E-42 279.2 31.4 312 11-352 1-325 (325)
96 cd08270 MDR4 Medium chain dehy 100.0 3.7E-37 7.9E-42 276.2 29.0 298 11-352 1-305 (305)
97 COG2130 Putative NADP-dependen 100.0 2.5E-37 5.4E-42 258.8 25.5 298 23-354 27-340 (340)
98 cd05282 ETR_like 2-enoyl thioe 100.0 6.6E-37 1.4E-41 276.7 30.0 298 23-351 14-323 (323)
99 cd08269 Zn_ADH9 Alcohol dehydr 100.0 1.5E-36 3.3E-41 273.0 32.1 301 18-350 3-311 (312)
100 cd08243 quinone_oxidoreductase 100.0 1.2E-36 2.7E-41 274.5 29.4 311 11-350 1-319 (320)
101 cd08289 MDR_yhfp_like Yhfp put 100.0 2.3E-36 5E-41 273.6 30.7 314 11-352 1-326 (326)
102 cd08252 AL_MDR Arginate lyase 100.0 6.1E-36 1.3E-40 271.9 31.6 311 11-350 1-335 (336)
103 TIGR02823 oxido_YhdH putative 100.0 8.9E-36 1.9E-40 269.4 31.6 310 12-352 1-323 (323)
104 cd08248 RTN4I1 Human Reticulon 100.0 4.7E-36 1E-40 274.2 25.9 308 11-350 1-349 (350)
105 cd08288 MDR_yhdh Yhdh putative 100.0 7.2E-35 1.6E-39 263.6 30.6 312 11-352 1-324 (324)
106 cd05286 QOR2 Quinone oxidoredu 100.0 1.3E-34 2.9E-39 260.7 31.7 308 12-351 1-319 (320)
107 cd08253 zeta_crystallin Zeta-c 100.0 1.1E-34 2.5E-39 261.9 30.6 314 11-351 1-324 (325)
108 cd05276 p53_inducible_oxidored 100.0 1.4E-34 3.1E-39 260.9 30.8 308 11-349 1-322 (323)
109 cd05188 MDR Medium chain reduc 100.0 4.3E-35 9.3E-40 258.0 26.4 268 37-312 1-270 (271)
110 cd08247 AST1_like AST1 is a cy 100.0 1.6E-34 3.6E-39 264.1 30.7 318 11-352 1-352 (352)
111 cd05288 PGDH Prostaglandin deh 100.0 7.7E-35 1.7E-39 263.9 28.1 305 11-350 2-329 (329)
112 cd08271 MDR5 Medium chain dehy 100.0 9.5E-35 2.1E-39 262.7 28.6 312 11-352 1-325 (325)
113 cd08273 MDR8 Medium chain dehy 100.0 1.5E-34 3.3E-39 262.2 28.3 305 12-350 2-330 (331)
114 cd08272 MDR6 Medium chain dehy 100.0 3.4E-34 7.3E-39 259.1 29.3 311 11-352 1-326 (326)
115 TIGR02824 quinone_pig3 putativ 100.0 4.5E-33 9.8E-38 251.5 31.8 311 11-352 1-325 (325)
116 cd08251 polyketide_synthase po 100.0 2.2E-33 4.8E-38 251.1 28.9 291 30-349 2-302 (303)
117 cd08268 MDR2 Medium chain dehy 100.0 3.9E-33 8.5E-38 252.2 30.3 315 11-351 1-327 (328)
118 cd05289 MDR_like_2 alcohol deh 100.0 2.8E-33 6E-38 251.1 26.9 300 11-349 1-308 (309)
119 cd08241 QOR1 Quinone oxidoredu 100.0 1.5E-32 3.2E-37 247.9 30.4 309 11-351 1-323 (323)
120 cd08275 MDR3 Medium chain dehy 100.0 4.7E-32 1E-36 246.3 32.1 310 12-352 1-337 (337)
121 cd08267 MDR1 Medium chain dehy 100.0 7.3E-32 1.6E-36 243.2 26.7 294 24-349 15-318 (319)
122 cd05195 enoyl_red enoyl reduct 100.0 1.1E-31 2.3E-36 238.5 26.2 281 36-349 1-292 (293)
123 smart00829 PKS_ER Enoylreducta 100.0 5E-31 1.1E-35 233.9 26.1 276 40-349 2-287 (288)
124 cd08255 2-desacetyl-2-hydroxye 100.0 5.9E-29 1.3E-33 219.9 24.3 247 63-350 19-277 (277)
125 KOG1196 Predicted NAD-dependen 100.0 3.3E-28 7.1E-33 203.4 25.5 295 25-353 26-341 (343)
126 KOG1202 Animal-type fatty acid 100.0 3.4E-29 7.4E-34 239.0 18.4 293 23-353 1429-1742(2376)
127 PF08240 ADH_N: Alcohol dehydr 99.9 4.8E-23 1E-27 155.2 7.9 104 35-138 1-109 (109)
128 PF00107 ADH_zinc_N: Zinc-bind 99.8 9.8E-18 2.1E-22 130.7 12.8 127 180-314 1-129 (130)
129 cd00401 AdoHcyase S-adenosyl-L 99.5 3E-13 6.5E-18 123.3 15.9 176 157-353 188-377 (413)
130 PRK09424 pntA NAD(P) transhydr 99.4 2.9E-12 6.2E-17 119.9 14.9 155 166-325 161-339 (509)
131 PF13602 ADH_zinc_N_2: Zinc-bi 99.3 1E-12 2.2E-17 101.8 0.9 119 213-350 1-127 (127)
132 PRK11873 arsM arsenite S-adeno 98.8 1.1E-07 2.5E-12 83.6 13.3 167 164-344 72-252 (272)
133 TIGR00561 pntA NAD(P) transhyd 98.7 5.1E-07 1.1E-11 84.7 15.3 107 168-276 162-289 (511)
134 TIGR01035 hemA glutamyl-tRNA r 98.5 4.3E-09 9.4E-14 97.8 -4.0 160 67-252 89-253 (417)
135 PRK05476 S-adenosyl-L-homocyst 98.5 2.6E-06 5.6E-11 78.5 13.6 104 156-274 197-302 (425)
136 TIGR00936 ahcY adenosylhomocys 98.4 7.3E-06 1.6E-10 75.1 12.6 103 157-274 181-285 (406)
137 PRK00045 hemA glutamyl-tRNA re 98.3 1.6E-08 3.4E-13 94.4 -5.0 158 67-252 91-255 (423)
138 PRK00517 prmA ribosomal protei 98.3 1.4E-05 3E-10 69.4 13.5 131 123-273 78-215 (250)
139 PRK08306 dipicolinate synthase 98.3 1.6E-05 3.4E-10 70.6 14.0 97 169-277 151-247 (296)
140 cd05213 NAD_bind_Glutamyl_tRNA 98.3 2.1E-06 4.5E-11 76.9 7.5 108 133-252 139-251 (311)
141 PF11017 DUF2855: Protein of u 98.3 1.6E-05 3.6E-10 69.7 12.6 185 74-275 39-235 (314)
142 PLN02494 adenosylhomocysteinas 98.3 1.3E-05 2.7E-10 74.3 11.9 101 158-273 241-343 (477)
143 COG2518 Pcm Protein-L-isoaspar 98.2 1E-05 2.2E-10 66.5 9.2 99 161-270 64-168 (209)
144 TIGR00518 alaDH alanine dehydr 98.0 6E-05 1.3E-09 69.1 11.1 99 169-275 166-271 (370)
145 PTZ00075 Adenosylhomocysteinas 97.9 0.00012 2.6E-09 68.1 11.8 125 135-274 218-344 (476)
146 PRK08324 short chain dehydroge 97.9 8.4E-05 1.8E-09 74.0 11.5 138 122-273 385-559 (681)
147 PRK12771 putative glutamate sy 97.9 1.2E-05 2.6E-10 78.3 4.7 80 166-251 133-234 (564)
148 COG2242 CobL Precorrin-6B meth 97.9 0.00016 3.5E-09 58.3 10.2 104 163-273 28-137 (187)
149 TIGR02853 spore_dpaA dipicolin 97.8 0.00056 1.2E-08 60.4 13.2 96 169-276 150-245 (287)
150 PF01488 Shikimate_DH: Shikima 97.7 0.00013 2.9E-09 56.7 7.6 74 168-250 10-86 (135)
151 TIGR00406 prmA ribosomal prote 97.7 0.00012 2.5E-09 64.9 7.8 97 167-273 157-261 (288)
152 PRK13943 protein-L-isoaspartat 97.7 0.00044 9.6E-09 61.8 10.9 102 162-270 73-179 (322)
153 PRK00377 cbiT cobalt-precorrin 97.7 0.00073 1.6E-08 56.4 11.4 102 163-270 34-144 (198)
154 KOG1209 1-Acyl dihydroxyaceton 97.7 0.00072 1.6E-08 55.3 10.6 82 168-250 5-92 (289)
155 PRK11705 cyclopropane fatty ac 97.6 0.0005 1.1E-08 63.3 10.4 113 150-272 148-268 (383)
156 COG4221 Short-chain alcohol de 97.6 0.00048 1E-08 57.9 8.6 79 169-249 5-91 (246)
157 PF01135 PCMT: Protein-L-isoas 97.6 0.00017 3.7E-09 60.4 6.0 102 161-270 64-171 (209)
158 PRK06182 short chain dehydroge 97.4 0.0021 4.5E-08 56.5 11.8 79 169-249 2-84 (273)
159 COG2230 Cfa Cyclopropane fatty 97.4 0.0029 6.2E-08 55.0 11.9 109 156-276 59-181 (283)
160 PRK05693 short chain dehydroge 97.4 0.0025 5.5E-08 56.0 12.1 77 171-249 2-82 (274)
161 PRK05786 fabG 3-ketoacyl-(acyl 97.4 0.003 6.5E-08 54.1 12.1 103 169-274 4-138 (238)
162 PRK13942 protein-L-isoaspartat 97.4 0.0019 4.2E-08 54.4 10.5 103 161-270 68-175 (212)
163 COG1748 LYS9 Saccharopine dehy 97.4 0.0025 5.4E-08 58.1 11.4 97 171-274 2-102 (389)
164 PF02353 CMAS: Mycolic acid cy 97.3 0.00062 1.3E-08 59.6 7.1 101 160-272 53-167 (273)
165 PF13460 NAD_binding_10: NADH( 97.3 0.0032 6.9E-08 51.6 11.1 94 173-274 1-100 (183)
166 PRK13944 protein-L-isoaspartat 97.3 0.0018 4E-08 54.3 9.5 101 161-270 64-172 (205)
167 TIGR02469 CbiT precorrin-6Y C5 97.3 0.0027 5.8E-08 48.3 9.7 103 162-270 12-121 (124)
168 PRK12742 oxidoreductase; Provi 97.3 0.0062 1.3E-07 52.1 13.0 77 169-249 5-85 (237)
169 COG3967 DltE Short-chain dehyd 97.3 0.0019 4.1E-08 52.7 8.8 79 169-249 4-88 (245)
170 PRK05993 short chain dehydroge 97.3 0.0021 4.5E-08 56.7 10.0 79 169-249 3-86 (277)
171 PRK14967 putative methyltransf 97.3 0.017 3.6E-07 49.2 14.9 98 163-270 30-158 (223)
172 TIGR00438 rrmJ cell division p 97.2 0.0061 1.3E-07 50.4 11.7 101 164-271 27-146 (188)
173 PLN03209 translocon at the inn 97.2 0.0074 1.6E-07 57.9 12.9 47 163-210 73-120 (576)
174 PRK00107 gidB 16S rRNA methylt 97.2 0.005 1.1E-07 50.7 10.4 98 166-271 42-145 (187)
175 KOG1205 Predicted dehydrogenas 97.2 0.0032 7E-08 54.8 9.5 110 169-280 11-158 (282)
176 PRK07326 short chain dehydroge 97.1 0.0087 1.9E-07 51.2 12.1 79 169-249 5-92 (237)
177 PF12847 Methyltransf_18: Meth 97.1 0.0018 3.9E-08 48.3 6.8 94 169-270 1-110 (112)
178 PRK00536 speE spermidine synth 97.1 0.0019 4.1E-08 55.9 7.4 102 168-273 71-173 (262)
179 TIGR00080 pimt protein-L-isoas 97.1 0.0056 1.2E-07 51.8 10.1 103 161-270 69-176 (215)
180 PF02826 2-Hacid_dh_C: D-isome 97.1 0.0036 7.9E-08 51.2 8.7 92 167-273 33-129 (178)
181 PRK12828 short chain dehydroge 97.1 0.011 2.4E-07 50.5 12.1 79 169-249 6-92 (239)
182 PF00670 AdoHcyase_NAD: S-aden 97.1 0.0066 1.4E-07 48.1 9.5 93 166-273 19-112 (162)
183 PRK08017 oxidoreductase; Provi 97.0 0.0059 1.3E-07 52.9 9.9 78 171-249 3-84 (256)
184 PRK13940 glutamyl-tRNA reducta 97.0 0.0033 7.2E-08 58.4 8.6 76 168-252 179-255 (414)
185 COG4122 Predicted O-methyltran 97.0 0.013 2.8E-07 49.2 11.0 108 163-274 53-169 (219)
186 TIGR01470 cysG_Nterm siroheme 97.0 0.037 8.1E-07 46.3 13.9 115 169-295 8-124 (205)
187 COG0300 DltE Short-chain dehyd 96.9 0.0098 2.1E-07 51.4 10.2 80 167-249 3-94 (265)
188 PF01262 AlaDh_PNT_C: Alanine 96.9 0.0031 6.8E-08 51.1 6.8 101 170-273 20-141 (168)
189 PRK04148 hypothetical protein; 96.9 0.0066 1.4E-07 46.6 8.1 93 168-270 15-108 (134)
190 COG0686 Ald Alanine dehydrogen 96.9 0.0052 1.1E-07 53.4 8.2 98 170-274 168-271 (371)
191 PRK07060 short chain dehydroge 96.9 0.01 2.2E-07 51.0 10.3 77 169-249 8-87 (245)
192 PRK06139 short chain dehydroge 96.9 0.0059 1.3E-07 55.3 8.9 79 169-249 6-94 (330)
193 PRK08177 short chain dehydroge 96.9 0.0091 2E-07 50.8 9.6 77 171-249 2-81 (225)
194 PF13241 NAD_binding_7: Putati 96.9 0.0078 1.7E-07 44.3 8.0 92 169-277 6-97 (103)
195 PRK07806 short chain dehydroge 96.9 0.025 5.4E-07 48.8 12.5 101 169-272 5-135 (248)
196 cd01080 NAD_bind_m-THF_DH_Cycl 96.9 0.014 2.9E-07 47.2 9.9 97 148-274 22-119 (168)
197 PRK08261 fabG 3-ketoacyl-(acyl 96.9 0.018 3.8E-07 54.7 12.4 79 169-249 209-294 (450)
198 PRK08628 short chain dehydroge 96.8 0.022 4.8E-07 49.5 11.8 79 169-249 6-93 (258)
199 PRK08265 short chain dehydroge 96.8 0.022 4.7E-07 49.7 11.8 79 169-249 5-90 (261)
200 PLN02366 spermidine synthase 96.8 0.018 3.8E-07 51.4 10.9 101 167-272 89-207 (308)
201 PRK06718 precorrin-2 dehydroge 96.8 0.054 1.2E-06 45.2 13.2 93 169-274 9-103 (202)
202 PRK06953 short chain dehydroge 96.8 0.013 2.7E-07 49.8 9.8 77 171-249 2-80 (222)
203 PRK06057 short chain dehydroge 96.8 0.011 2.4E-07 51.3 9.5 79 169-249 6-89 (255)
204 PRK07402 precorrin-6B methylas 96.8 0.033 7.1E-07 46.3 11.9 105 162-272 33-143 (196)
205 COG2226 UbiE Methylase involve 96.8 0.025 5.4E-07 48.2 11.2 108 161-275 43-160 (238)
206 PRK03369 murD UDP-N-acetylmura 96.7 0.014 3.1E-07 55.8 10.9 74 166-250 8-81 (488)
207 PRK12939 short chain dehydroge 96.7 0.025 5.5E-07 48.7 11.5 79 169-249 6-94 (250)
208 CHL00194 ycf39 Ycf39; Provisio 96.7 0.029 6.3E-07 50.5 12.1 95 172-273 2-111 (317)
209 COG0421 SpeE Spermidine syntha 96.7 0.023 5E-07 49.8 10.8 100 167-270 75-189 (282)
210 PRK06949 short chain dehydroge 96.7 0.012 2.5E-07 51.2 9.2 80 168-249 7-96 (258)
211 PRK12549 shikimate 5-dehydroge 96.7 0.017 3.7E-07 51.0 10.1 44 168-211 125-168 (284)
212 PRK00811 spermidine synthase; 96.7 0.014 3E-07 51.6 9.5 98 168-271 75-191 (283)
213 PRK07109 short chain dehydroge 96.7 0.026 5.7E-07 51.2 11.6 79 169-249 7-95 (334)
214 KOG1014 17 beta-hydroxysteroid 96.7 0.016 3.5E-07 50.6 9.4 79 168-249 47-136 (312)
215 TIGR01318 gltD_gamma_fam gluta 96.6 0.0096 2.1E-07 56.7 8.9 79 168-251 139-238 (467)
216 PLN03075 nicotianamine synthas 96.6 0.014 3.1E-07 51.3 9.0 99 168-271 122-233 (296)
217 PRK07831 short chain dehydroge 96.6 0.018 3.9E-07 50.2 9.9 81 167-249 14-107 (262)
218 PRK12829 short chain dehydroge 96.6 0.012 2.6E-07 51.2 8.8 82 166-249 7-96 (264)
219 PRK07576 short chain dehydroge 96.6 0.054 1.2E-06 47.3 12.9 78 169-248 8-95 (264)
220 PRK08267 short chain dehydroge 96.6 0.051 1.1E-06 47.2 12.7 77 171-249 2-87 (260)
221 COG0373 HemA Glutamyl-tRNA red 96.6 0.014 3E-07 53.7 9.1 97 168-274 176-277 (414)
222 PLN02780 ketoreductase/ oxidor 96.6 0.016 3.4E-07 52.3 9.6 80 169-249 52-142 (320)
223 TIGR02356 adenyl_thiF thiazole 96.6 0.025 5.3E-07 47.3 10.1 35 169-203 20-54 (202)
224 PRK06719 precorrin-2 dehydroge 96.6 0.058 1.3E-06 43.0 11.7 89 169-271 12-100 (157)
225 PF06325 PrmA: Ribosomal prote 96.6 0.0098 2.1E-07 52.5 7.9 96 167-274 159-262 (295)
226 TIGR03325 BphB_TodD cis-2,3-di 96.6 0.014 3E-07 50.9 9.0 78 169-248 4-88 (262)
227 PRK07814 short chain dehydroge 96.6 0.014 3E-07 51.0 8.9 79 169-249 9-97 (263)
228 PRK06200 2,3-dihydroxy-2,3-dih 96.6 0.016 3.4E-07 50.6 9.1 79 169-249 5-90 (263)
229 PLN02781 Probable caffeoyl-CoA 96.6 0.023 5E-07 48.7 9.9 105 163-271 62-178 (234)
230 PRK05872 short chain dehydroge 96.5 0.017 3.7E-07 51.4 9.4 79 169-249 8-95 (296)
231 PRK12809 putative oxidoreducta 96.5 0.012 2.5E-07 58.4 9.1 76 169-250 309-406 (639)
232 COG2519 GCD14 tRNA(1-methylade 96.5 0.035 7.7E-07 47.1 10.5 104 162-272 87-196 (256)
233 COG0169 AroE Shikimate 5-dehyd 96.5 0.01 2.2E-07 52.0 7.5 45 168-212 124-168 (283)
234 TIGR01809 Shik-DH-AROM shikima 96.5 0.009 2E-07 52.7 7.2 75 169-249 124-200 (282)
235 cd05311 NAD_bind_2_malic_enz N 96.5 0.048 1E-06 46.4 11.4 91 168-271 23-128 (226)
236 PRK12429 3-hydroxybutyrate deh 96.5 0.042 9E-07 47.6 11.4 79 169-249 3-91 (258)
237 PRK06180 short chain dehydroge 96.5 0.018 3.9E-07 50.7 9.1 79 169-249 3-88 (277)
238 PRK12550 shikimate 5-dehydroge 96.5 0.021 4.7E-07 49.9 9.3 70 166-249 118-188 (272)
239 PRK08339 short chain dehydroge 96.5 0.023 4.9E-07 49.7 9.6 79 169-249 7-95 (263)
240 PRK01581 speE spermidine synth 96.5 0.067 1.4E-06 48.4 12.4 100 167-272 148-269 (374)
241 PLN02476 O-methyltransferase 96.5 0.034 7.3E-07 48.6 10.3 106 163-272 112-229 (278)
242 COG2227 UbiG 2-polyprenyl-3-me 96.5 0.025 5.4E-07 47.6 9.1 95 168-270 58-160 (243)
243 PRK04457 spermidine synthase; 96.5 0.042 9.1E-07 48.0 10.9 97 168-270 65-176 (262)
244 PRK07825 short chain dehydroge 96.4 0.022 4.7E-07 50.0 9.4 78 170-249 5-88 (273)
245 PRK09186 flagellin modificatio 96.4 0.057 1.2E-06 46.7 11.9 78 169-248 3-92 (256)
246 PRK06398 aldose dehydrogenase; 96.4 0.036 7.7E-07 48.3 10.4 74 169-249 5-82 (258)
247 cd01075 NAD_bind_Leu_Phe_Val_D 96.4 0.054 1.2E-06 45.1 10.9 82 168-262 26-108 (200)
248 PRK05867 short chain dehydroge 96.4 0.02 4.4E-07 49.6 8.8 79 169-249 8-96 (253)
249 PRK05653 fabG 3-ketoacyl-(acyl 96.4 0.085 1.8E-06 45.2 12.6 79 169-249 4-92 (246)
250 PRK07774 short chain dehydroge 96.4 0.024 5.3E-07 48.9 9.1 79 169-249 5-93 (250)
251 PRK11207 tellurite resistance 96.4 0.011 2.4E-07 49.2 6.6 98 163-271 24-134 (197)
252 PF03435 Saccharop_dh: Sacchar 96.4 0.037 7.9E-07 51.4 10.7 90 173-269 1-96 (386)
253 PRK06196 oxidoreductase; Provi 96.4 0.029 6.4E-07 50.4 9.8 79 169-249 25-109 (315)
254 PRK09072 short chain dehydroge 96.4 0.03 6.6E-07 48.8 9.6 78 169-249 4-90 (263)
255 PRK08217 fabG 3-ketoacyl-(acyl 96.3 0.028 6.1E-07 48.5 9.4 79 169-249 4-92 (253)
256 TIGR01832 kduD 2-deoxy-D-gluco 96.3 0.034 7.4E-07 47.9 9.9 79 169-249 4-90 (248)
257 PRK06128 oxidoreductase; Provi 96.3 0.072 1.6E-06 47.5 12.2 79 169-249 54-144 (300)
258 PRK08261 fabG 3-ketoacyl-(acyl 96.3 0.012 2.5E-07 55.9 7.4 94 163-274 27-126 (450)
259 PRK12769 putative oxidoreducta 96.3 0.017 3.6E-07 57.5 8.6 76 168-249 325-422 (654)
260 PRK06841 short chain dehydroge 96.3 0.022 4.8E-07 49.3 8.5 79 169-249 14-99 (255)
261 cd01078 NAD_bind_H4MPT_DH NADP 96.3 0.054 1.2E-06 44.9 10.4 76 169-251 27-109 (194)
262 PRK09291 short chain dehydroge 96.3 0.03 6.5E-07 48.5 9.2 74 170-249 2-83 (257)
263 COG3288 PntA NAD/NADP transhyd 96.3 0.029 6.3E-07 48.7 8.6 130 164-296 158-308 (356)
264 PRK08703 short chain dehydroge 96.3 0.043 9.3E-07 47.0 10.0 80 169-249 5-97 (239)
265 PRK05866 short chain dehydroge 96.3 0.032 7E-07 49.6 9.4 79 169-249 39-127 (293)
266 PRK06484 short chain dehydroge 96.3 0.072 1.6E-06 51.5 12.6 80 168-249 267-353 (520)
267 PRK07502 cyclohexadienyl dehyd 96.3 0.047 1E-06 48.9 10.5 91 171-272 7-101 (307)
268 PRK14175 bifunctional 5,10-met 96.2 0.05 1.1E-06 47.7 10.1 95 149-274 137-233 (286)
269 PRK08263 short chain dehydroge 96.2 0.069 1.5E-06 46.9 11.3 78 170-249 3-87 (275)
270 TIGR00138 gidB 16S rRNA methyl 96.2 0.035 7.6E-07 45.5 8.7 94 169-270 42-141 (181)
271 PRK07454 short chain dehydroge 96.2 0.042 9.2E-07 47.1 9.8 79 169-249 5-93 (241)
272 PRK07832 short chain dehydroge 96.2 0.068 1.5E-06 46.8 11.2 76 172-249 2-88 (272)
273 PRK06505 enoyl-(acyl carrier p 96.2 0.039 8.5E-07 48.5 9.6 79 169-249 6-95 (271)
274 PRK06463 fabG 3-ketoacyl-(acyl 96.2 0.037 8E-07 48.0 9.4 79 169-249 6-89 (255)
275 PRK07231 fabG 3-ketoacyl-(acyl 96.2 0.032 6.9E-07 48.1 8.9 79 169-249 4-91 (251)
276 PRK06483 dihydromonapterin red 96.2 0.045 9.8E-07 46.8 9.8 78 170-249 2-84 (236)
277 COG2264 PrmA Ribosomal protein 96.2 0.11 2.3E-06 45.8 11.9 101 166-274 159-266 (300)
278 PRK06500 short chain dehydroge 96.2 0.036 7.8E-07 47.7 9.2 79 169-249 5-90 (249)
279 PRK00312 pcm protein-L-isoaspa 96.2 0.081 1.8E-06 44.6 11.0 101 162-271 71-175 (212)
280 cd01065 NAD_bind_Shikimate_DH 96.2 0.035 7.6E-07 44.1 8.4 74 168-250 17-92 (155)
281 PRK07062 short chain dehydroge 96.2 0.031 6.6E-07 48.8 8.7 79 169-249 7-97 (265)
282 PRK07024 short chain dehydroge 96.2 0.039 8.4E-07 47.9 9.3 78 170-249 2-88 (257)
283 PRK08618 ornithine cyclodeamin 96.2 0.083 1.8E-06 47.7 11.5 94 168-274 125-224 (325)
284 PRK07890 short chain dehydroge 96.1 0.041 8.9E-07 47.7 9.3 80 168-249 3-92 (258)
285 PRK08317 hypothetical protein; 96.1 0.064 1.4E-06 45.8 10.4 101 162-271 12-124 (241)
286 PRK15116 sulfur acceptor prote 96.1 0.14 3E-06 44.6 12.3 103 169-273 29-155 (268)
287 PLN02823 spermine synthase 96.1 0.058 1.3E-06 48.7 10.2 100 169-271 103-220 (336)
288 PRK08589 short chain dehydroge 96.1 0.037 8.1E-07 48.5 8.9 79 169-249 5-92 (272)
289 PRK06482 short chain dehydroge 96.1 0.04 8.6E-07 48.4 9.1 77 171-249 3-86 (276)
290 PRK07677 short chain dehydroge 96.1 0.045 9.8E-07 47.3 9.4 78 170-249 1-88 (252)
291 PF02254 TrkA_N: TrkA-N domain 96.1 0.1 2.3E-06 39.0 10.2 74 173-251 1-74 (116)
292 cd00755 YgdL_like Family of ac 96.1 0.083 1.8E-06 45.0 10.5 99 170-270 11-133 (231)
293 PRK00258 aroE shikimate 5-dehy 96.1 0.02 4.4E-07 50.4 7.1 74 168-249 121-195 (278)
294 PRK07478 short chain dehydroge 96.1 0.042 9E-07 47.6 9.0 79 169-249 5-93 (254)
295 PRK01683 trans-aconitate 2-met 96.1 0.085 1.8E-06 45.9 10.9 99 162-270 24-129 (258)
296 PRK07574 formate dehydrogenase 96.1 0.067 1.4E-06 49.2 10.5 91 169-273 191-286 (385)
297 PRK05854 short chain dehydroge 96.1 0.049 1.1E-06 48.9 9.6 79 169-249 13-103 (313)
298 PRK07533 enoyl-(acyl carrier p 96.1 0.053 1.1E-06 47.2 9.6 79 169-249 9-98 (258)
299 PRK08862 short chain dehydroge 96.1 0.044 9.5E-07 46.7 8.9 78 169-248 4-92 (227)
300 PRK08287 cobalt-precorrin-6Y C 96.0 0.13 2.8E-06 42.3 11.4 100 162-270 24-130 (187)
301 PRK07523 gluconate 5-dehydroge 96.0 0.044 9.5E-07 47.5 9.0 79 169-249 9-97 (255)
302 PRK00121 trmB tRNA (guanine-N( 96.0 0.13 2.8E-06 43.0 11.4 98 169-271 40-156 (202)
303 cd01483 E1_enzyme_family Super 96.0 0.086 1.9E-06 41.3 9.8 32 172-203 1-32 (143)
304 PRK06179 short chain dehydroge 96.0 0.028 6.1E-07 49.2 7.8 76 170-249 4-83 (270)
305 PRK06172 short chain dehydroge 96.0 0.043 9.3E-07 47.4 8.9 79 169-249 6-94 (253)
306 TIGR03840 TMPT_Se_Te thiopurin 96.0 0.083 1.8E-06 44.5 10.2 102 167-272 32-153 (213)
307 PRK08213 gluconate 5-dehydroge 96.0 0.048 1E-06 47.4 9.1 79 169-249 11-99 (259)
308 PRK08264 short chain dehydroge 96.0 0.045 9.8E-07 46.8 8.9 75 169-249 5-83 (238)
309 COG0569 TrkA K+ transport syst 96.0 0.068 1.5E-06 45.5 9.7 73 172-249 2-76 (225)
310 PLN00141 Tic62-NAD(P)-related 96.0 0.15 3.3E-06 44.1 12.2 101 168-273 15-133 (251)
311 PRK14103 trans-aconitate 2-met 96.0 0.11 2.4E-06 45.1 11.3 98 161-270 21-125 (255)
312 PRK13394 3-hydroxybutyrate deh 96.0 0.058 1.3E-06 46.8 9.6 79 169-249 6-94 (262)
313 PF03446 NAD_binding_2: NAD bi 96.0 0.13 2.9E-06 41.3 10.9 89 172-274 3-97 (163)
314 PRK06194 hypothetical protein; 96.0 0.054 1.2E-06 47.8 9.6 79 169-249 5-93 (287)
315 PRK05884 short chain dehydroge 96.0 0.067 1.4E-06 45.4 9.7 74 172-248 2-78 (223)
316 PRK06079 enoyl-(acyl carrier p 96.0 0.051 1.1E-06 47.1 9.1 79 169-249 6-93 (252)
317 PRK06138 short chain dehydroge 96.0 0.043 9.4E-07 47.3 8.7 79 169-249 4-91 (252)
318 PRK08643 acetoin reductase; Va 96.0 0.047 1E-06 47.3 8.8 78 170-249 2-89 (256)
319 KOG1610 Corticosteroid 11-beta 96.0 0.19 4E-06 44.2 12.1 110 167-277 26-170 (322)
320 PLN00203 glutamyl-tRNA reducta 95.9 0.031 6.8E-07 53.5 8.1 73 170-251 266-341 (519)
321 KOG0725 Reductases with broad 95.9 0.048 1E-06 47.8 8.7 81 168-249 6-99 (270)
322 PLN02253 xanthoxin dehydrogena 95.9 0.048 1E-06 48.0 8.8 79 169-249 17-104 (280)
323 PRK07453 protochlorophyllide o 95.9 0.054 1.2E-06 48.9 9.3 78 169-248 5-92 (322)
324 PRK07688 thiamine/molybdopteri 95.9 0.1 2.2E-06 47.3 10.9 34 170-203 24-57 (339)
325 PRK07063 short chain dehydroge 95.9 0.05 1.1E-06 47.3 8.8 79 169-249 6-96 (260)
326 PRK07904 short chain dehydroge 95.9 0.083 1.8E-06 45.8 10.1 81 167-249 5-97 (253)
327 PRK05717 oxidoreductase; Valid 95.9 0.057 1.2E-06 46.8 9.1 79 169-249 9-94 (255)
328 PRK12823 benD 1,6-dihydroxycyc 95.9 0.046 9.9E-07 47.5 8.5 79 169-249 7-94 (260)
329 PRK08226 short chain dehydroge 95.9 0.055 1.2E-06 47.1 9.0 79 169-249 5-92 (263)
330 PRK06701 short chain dehydroge 95.9 0.18 4E-06 44.7 12.5 81 167-249 43-134 (290)
331 PLN02657 3,8-divinyl protochlo 95.9 0.24 5.3E-06 46.0 13.7 106 165-273 55-183 (390)
332 PRK07035 short chain dehydroge 95.9 0.055 1.2E-06 46.8 8.9 79 169-249 7-95 (252)
333 PRK12475 thiamine/molybdopteri 95.9 0.074 1.6E-06 48.2 9.9 35 170-204 24-58 (338)
334 PRK12481 2-deoxy-D-gluconate 3 95.9 0.065 1.4E-06 46.4 9.3 79 169-249 7-93 (251)
335 TIGR00417 speE spermidine synt 95.9 0.13 2.8E-06 45.2 11.1 98 168-271 71-186 (270)
336 PRK07856 short chain dehydroge 95.9 0.044 9.6E-07 47.4 8.2 77 169-249 5-85 (252)
337 PRK12367 short chain dehydroge 95.9 0.075 1.6E-06 45.9 9.6 72 170-249 14-89 (245)
338 PLN02244 tocopherol O-methyltr 95.9 0.052 1.1E-06 49.4 8.9 98 168-272 117-224 (340)
339 PRK08644 thiamine biosynthesis 95.9 0.079 1.7E-06 44.6 9.4 35 169-203 27-61 (212)
340 PF02670 DXP_reductoisom: 1-de 95.9 0.11 2.3E-06 39.7 9.1 93 173-267 1-117 (129)
341 PRK12937 short chain dehydroge 95.9 0.21 4.6E-06 42.8 12.4 79 169-249 4-93 (245)
342 PRK06181 short chain dehydroge 95.9 0.06 1.3E-06 46.9 9.1 78 170-249 1-88 (263)
343 TIGR03215 ac_ald_DH_ac acetald 95.9 0.15 3.3E-06 44.8 11.3 91 172-274 3-97 (285)
344 PRK05876 short chain dehydroge 95.8 0.079 1.7E-06 46.6 9.8 79 169-249 5-93 (275)
345 PF01408 GFO_IDH_MocA: Oxidore 95.8 0.2 4.2E-06 37.8 10.8 89 172-273 2-94 (120)
346 PRK12548 shikimate 5-dehydroge 95.8 0.083 1.8E-06 46.8 9.9 37 168-204 124-160 (289)
347 PRK10538 malonic semialdehyde 95.8 0.063 1.4E-06 46.3 8.9 76 172-249 2-84 (248)
348 PRK06197 short chain dehydroge 95.8 0.068 1.5E-06 47.8 9.4 79 169-249 15-105 (306)
349 PRK08340 glucose-1-dehydrogena 95.8 0.086 1.9E-06 45.8 9.8 76 172-249 2-86 (259)
350 TIGR00507 aroE shikimate 5-deh 95.8 0.081 1.8E-06 46.4 9.7 71 167-249 114-188 (270)
351 TIGR02355 moeB molybdopterin s 95.8 0.092 2E-06 45.1 9.7 35 170-204 24-58 (240)
352 PRK05875 short chain dehydroge 95.8 0.066 1.4E-06 47.0 9.1 78 169-248 6-95 (276)
353 PRK07985 oxidoreductase; Provi 95.8 0.16 3.4E-06 45.2 11.5 79 169-249 48-138 (294)
354 TIGR03206 benzo_BadH 2-hydroxy 95.8 0.089 1.9E-06 45.3 9.8 79 169-248 2-89 (250)
355 PRK06603 enoyl-(acyl carrier p 95.8 0.082 1.8E-06 46.1 9.5 79 169-249 7-96 (260)
356 PLN03139 formate dehydrogenase 95.8 0.1 2.2E-06 48.1 10.3 91 169-273 198-293 (386)
357 PRK07067 sorbitol dehydrogenas 95.8 0.072 1.6E-06 46.2 9.2 78 170-249 6-90 (257)
358 cd00757 ThiF_MoeB_HesA_family 95.8 0.14 2.9E-06 43.8 10.6 34 170-203 21-54 (228)
359 PRK08594 enoyl-(acyl carrier p 95.8 0.17 3.8E-06 43.9 11.6 78 169-248 6-96 (257)
360 PRK06198 short chain dehydroge 95.8 0.07 1.5E-06 46.3 9.1 80 169-249 5-94 (260)
361 PRK07577 short chain dehydroge 95.8 0.057 1.2E-06 46.0 8.4 74 169-249 2-78 (234)
362 PRK08219 short chain dehydroge 95.8 0.12 2.6E-06 43.7 10.4 74 171-249 4-81 (227)
363 PRK05562 precorrin-2 dehydroge 95.7 0.58 1.3E-05 39.5 13.9 116 169-296 24-141 (223)
364 PTZ00098 phosphoethanolamine N 95.7 0.13 2.7E-06 45.0 10.4 104 161-272 44-157 (263)
365 PRK06940 short chain dehydroge 95.7 0.21 4.5E-06 43.9 12.0 77 170-249 2-86 (275)
366 PRK10669 putative cation:proto 95.7 0.094 2E-06 51.2 10.6 75 171-250 418-492 (558)
367 PLN02589 caffeoyl-CoA O-methyl 95.7 0.13 2.9E-06 44.2 10.2 103 164-270 74-189 (247)
368 TIGR00563 rsmB ribosomal RNA s 95.7 0.12 2.6E-06 48.7 10.9 105 163-272 232-369 (426)
369 PRK06125 short chain dehydroge 95.7 0.14 3E-06 44.5 10.7 77 169-249 6-91 (259)
370 PRK11036 putative S-adenosyl-L 95.7 0.15 3.4E-06 44.2 10.9 95 168-270 43-148 (255)
371 PRK08277 D-mannonate oxidoredu 95.7 0.073 1.6E-06 46.8 9.0 78 169-248 9-96 (278)
372 PRK06720 hypothetical protein; 95.7 0.13 2.8E-06 41.6 9.6 80 169-249 15-103 (169)
373 PRK08690 enoyl-(acyl carrier p 95.7 0.093 2E-06 45.7 9.5 79 169-249 5-94 (261)
374 PF00106 adh_short: short chai 95.7 0.064 1.4E-06 43.0 7.9 79 171-249 1-90 (167)
375 PRK06914 short chain dehydroge 95.7 0.1 2.2E-06 45.9 9.8 78 169-249 2-91 (280)
376 PF03807 F420_oxidored: NADP o 95.7 0.51 1.1E-05 33.9 11.9 85 172-270 1-93 (96)
377 TIGR00477 tehB tellurite resis 95.7 0.049 1.1E-06 45.2 7.3 98 163-271 24-133 (195)
378 PRK06114 short chain dehydroge 95.6 0.098 2.1E-06 45.3 9.5 79 169-249 7-96 (254)
379 PRK05690 molybdopterin biosynt 95.6 0.12 2.7E-06 44.5 9.9 35 169-203 31-65 (245)
380 PF00899 ThiF: ThiF family; I 95.6 0.1 2.3E-06 40.4 8.7 34 170-203 2-35 (135)
381 PRK08415 enoyl-(acyl carrier p 95.6 0.11 2.4E-06 45.7 9.9 79 169-249 4-93 (274)
382 PRK08251 short chain dehydroge 95.6 0.09 2E-06 45.2 9.3 77 170-248 2-90 (248)
383 PRK07074 short chain dehydroge 95.6 0.091 2E-06 45.5 9.3 78 170-249 2-87 (257)
384 KOG1201 Hydroxysteroid 17-beta 95.6 0.099 2.1E-06 45.6 9.1 80 168-249 36-124 (300)
385 PRK08993 2-deoxy-D-gluconate 3 95.6 0.11 2.4E-06 45.0 9.8 79 169-249 9-95 (253)
386 PRK06124 gluconate 5-dehydroge 95.6 0.095 2.1E-06 45.4 9.4 79 169-249 10-98 (256)
387 PRK15469 ghrA bifunctional gly 95.6 0.097 2.1E-06 46.9 9.5 90 168-273 134-228 (312)
388 PRK08085 gluconate 5-dehydroge 95.6 0.094 2E-06 45.4 9.3 79 169-249 8-96 (254)
389 PRK12936 3-ketoacyl-(acyl-carr 95.6 0.09 1.9E-06 45.1 9.1 79 169-249 5-90 (245)
390 PRK12749 quinate/shikimate deh 95.6 0.099 2.1E-06 46.3 9.4 36 169-204 123-158 (288)
391 PRK03562 glutathione-regulated 95.6 0.099 2.1E-06 51.6 10.3 77 170-251 400-476 (621)
392 cd01492 Aos1_SUMO Ubiquitin ac 95.6 0.12 2.7E-06 42.9 9.5 34 170-203 21-54 (197)
393 cd01487 E1_ThiF_like E1_ThiF_l 95.6 0.1 2.2E-06 42.5 8.7 33 172-204 1-33 (174)
394 PRK07666 fabG 3-ketoacyl-(acyl 95.6 0.085 1.8E-06 45.2 8.8 80 169-249 6-94 (239)
395 PRK09242 tropinone reductase; 95.6 0.089 1.9E-06 45.6 9.0 79 169-249 8-98 (257)
396 PRK05597 molybdopterin biosynt 95.6 0.14 3E-06 46.8 10.5 35 170-204 28-62 (355)
397 PF01113 DapB_N: Dihydrodipico 95.6 0.16 3.5E-06 38.7 9.3 92 172-274 2-100 (124)
398 PRK10258 biotin biosynthesis p 95.6 0.39 8.4E-06 41.6 12.9 98 165-273 38-142 (251)
399 PRK04266 fibrillarin; Provisio 95.5 0.24 5.1E-06 42.2 11.1 101 163-270 66-175 (226)
400 PF01596 Methyltransf_3: O-met 95.5 0.025 5.5E-07 47.2 5.1 105 165-273 41-157 (205)
401 PRK08328 hypothetical protein; 95.5 0.085 1.8E-06 45.1 8.5 34 170-203 27-60 (231)
402 PRK13243 glyoxylate reductase; 95.5 0.12 2.6E-06 46.8 9.8 89 169-273 149-242 (333)
403 PRK07340 ornithine cyclodeamin 95.5 0.07 1.5E-06 47.7 8.2 93 168-274 123-220 (304)
404 COG2910 Putative NADH-flavin r 95.5 0.11 2.3E-06 42.0 8.1 92 172-273 2-106 (211)
405 PRK08220 2,3-dihydroxybenzoate 95.5 0.2 4.3E-06 43.2 10.9 74 169-249 7-86 (252)
406 PRK06077 fabG 3-ketoacyl-(acyl 95.5 0.37 7.9E-06 41.5 12.6 102 170-274 6-143 (252)
407 PRK12826 3-ketoacyl-(acyl-carr 95.5 0.094 2E-06 45.1 8.9 80 169-249 5-93 (251)
408 PRK08223 hypothetical protein; 95.5 0.15 3.3E-06 44.7 9.9 35 169-203 26-60 (287)
409 PRK12384 sorbitol-6-phosphate 95.5 0.13 2.8E-06 44.6 9.7 78 170-249 2-91 (259)
410 PRK06935 2-deoxy-D-gluconate 3 95.5 0.096 2.1E-06 45.5 8.9 79 169-249 14-101 (258)
411 TIGR01963 PHB_DH 3-hydroxybuty 95.5 0.092 2E-06 45.3 8.7 77 171-249 2-88 (255)
412 PF08704 GCD14: tRNA methyltra 95.5 0.037 8.1E-07 47.5 6.0 108 161-272 32-147 (247)
413 PRK08300 acetaldehyde dehydrog 95.4 0.2 4.4E-06 44.3 10.6 95 171-273 5-102 (302)
414 TIGR02752 MenG_heptapren 2-hep 95.4 0.19 4E-06 42.9 10.3 105 162-273 38-153 (231)
415 PRK14188 bifunctional 5,10-met 95.4 0.15 3.3E-06 45.0 9.8 94 149-274 137-233 (296)
416 PRK05447 1-deoxy-D-xylulose 5- 95.4 0.25 5.3E-06 45.2 11.2 97 171-269 2-120 (385)
417 PRK12746 short chain dehydroge 95.4 0.32 6.9E-06 42.0 11.9 79 169-249 5-100 (254)
418 COG1179 Dinucleotide-utilizing 95.4 0.29 6.4E-06 41.3 10.7 102 169-273 29-155 (263)
419 PRK03659 glutathione-regulated 95.4 0.14 3.1E-06 50.4 10.5 78 170-252 400-477 (601)
420 TIGR00452 methyltransferase, p 95.4 0.17 3.7E-06 45.3 10.1 101 158-270 110-224 (314)
421 PLN02928 oxidoreductase family 95.4 0.13 2.9E-06 46.8 9.6 97 169-273 158-264 (347)
422 PRK01438 murD UDP-N-acetylmura 95.4 0.17 3.7E-06 48.4 10.9 71 168-250 14-89 (480)
423 PRK14192 bifunctional 5,10-met 95.3 0.17 3.7E-06 44.6 9.9 77 167-273 156-233 (283)
424 PRK06101 short chain dehydroge 95.3 0.18 4E-06 43.2 10.1 75 171-248 2-80 (240)
425 PRK08159 enoyl-(acyl carrier p 95.3 0.18 3.8E-06 44.3 10.1 81 167-249 7-98 (272)
426 PRK06113 7-alpha-hydroxysteroi 95.3 0.12 2.6E-06 44.8 9.0 79 169-249 10-98 (255)
427 PRK07097 gluconate 5-dehydroge 95.3 0.14 3E-06 44.7 9.3 79 169-249 9-97 (265)
428 PF02558 ApbA: Ketopantoate re 95.3 0.0095 2.1E-07 47.2 1.7 97 173-274 1-104 (151)
429 PRK11088 rrmA 23S rRNA methylt 95.3 0.35 7.5E-06 42.5 11.7 95 168-272 84-182 (272)
430 TIGR02354 thiF_fam2 thiamine b 95.2 0.21 4.6E-06 41.6 9.7 34 170-203 21-54 (200)
431 PF01564 Spermine_synth: Sperm 95.2 0.034 7.3E-07 48.0 5.1 96 169-271 76-191 (246)
432 COG0673 MviM Predicted dehydro 95.2 0.53 1.2E-05 42.7 13.3 135 172-319 5-146 (342)
433 PF05368 NmrA: NmrA-like famil 95.2 0.11 2.4E-06 44.3 8.3 71 173-249 1-74 (233)
434 PRK07984 enoyl-(acyl carrier p 95.2 0.19 4.2E-06 43.8 10.0 78 169-248 5-93 (262)
435 TIGR02622 CDP_4_6_dhtase CDP-g 95.2 0.051 1.1E-06 49.6 6.6 75 169-249 3-85 (349)
436 smart00846 Gp_dh_N Glyceraldeh 95.2 0.37 8.1E-06 38.0 10.6 102 172-275 2-122 (149)
437 TIGR01532 E4PD_g-proteo D-eryt 95.2 0.24 5.2E-06 44.5 10.6 101 172-274 1-123 (325)
438 PRK03612 spermidine synthase; 95.2 0.19 4.2E-06 48.5 10.7 98 168-271 296-415 (521)
439 PRK08278 short chain dehydroge 95.2 0.12 2.7E-06 45.3 8.8 36 169-205 5-41 (273)
440 PRK08945 putative oxoacyl-(acy 95.2 0.11 2.4E-06 44.7 8.3 83 166-249 8-102 (247)
441 PRK14903 16S rRNA methyltransf 95.2 0.33 7.2E-06 45.7 11.9 103 164-272 232-367 (431)
442 PRK08303 short chain dehydroge 95.2 0.17 3.7E-06 45.3 9.6 34 169-203 7-41 (305)
443 TIGR02632 RhaD_aldol-ADH rhamn 95.2 0.12 2.6E-06 51.7 9.3 114 123-249 378-503 (676)
444 PRK07424 bifunctional sterol d 95.2 0.14 3.1E-06 47.6 9.2 74 169-249 177-255 (406)
445 PRK06484 short chain dehydroge 95.1 0.12 2.6E-06 50.0 9.3 79 169-249 4-89 (520)
446 PRK08063 enoyl-(acyl carrier p 95.1 0.14 3E-06 44.1 8.8 80 169-249 3-92 (250)
447 PRK06523 short chain dehydroge 95.1 0.1 2.3E-06 45.2 8.0 75 169-248 8-86 (260)
448 PRK08762 molybdopterin biosynt 95.1 0.15 3.3E-06 47.1 9.4 35 169-203 134-168 (376)
449 PRK05708 2-dehydropantoate 2-r 95.1 0.11 2.3E-06 46.6 8.2 98 172-273 4-106 (305)
450 PRK14618 NAD(P)H-dependent gly 95.1 0.22 4.7E-06 45.1 10.3 93 172-272 6-105 (328)
451 PRK12747 short chain dehydroge 95.1 0.44 9.5E-06 41.1 11.9 104 169-274 3-147 (252)
452 COG1648 CysG Siroheme synthase 95.1 0.55 1.2E-05 39.4 11.8 96 169-275 11-107 (210)
453 TIGR01505 tartro_sem_red 2-hyd 95.1 0.23 5E-06 44.1 10.2 70 172-254 1-70 (291)
454 PLN02233 ubiquinone biosynthes 95.1 0.32 6.9E-06 42.4 10.8 103 163-274 67-185 (261)
455 PF02719 Polysacc_synt_2: Poly 95.1 0.18 3.9E-06 44.3 9.1 75 173-249 1-87 (293)
456 PRK07791 short chain dehydroge 95.1 0.25 5.3E-06 43.8 10.3 80 168-249 4-102 (286)
457 PRK07102 short chain dehydroge 95.0 0.24 5.3E-06 42.4 10.0 76 171-249 2-86 (243)
458 PRK12480 D-lactate dehydrogena 95.0 0.32 6.8E-06 44.0 10.8 87 169-273 145-236 (330)
459 PF01210 NAD_Gly3P_dh_N: NAD-d 95.0 0.25 5.3E-06 39.4 9.1 80 172-262 1-91 (157)
460 PRK14902 16S rRNA methyltransf 95.0 0.25 5.4E-06 46.8 10.6 103 163-271 244-379 (444)
461 PF01209 Ubie_methyltran: ubiE 95.0 0.078 1.7E-06 45.4 6.5 104 162-274 40-156 (233)
462 PLN02256 arogenate dehydrogena 95.0 0.24 5.1E-06 44.2 9.8 92 166-272 32-128 (304)
463 PRK12743 oxidoreductase; Provi 94.9 0.18 3.9E-06 43.7 9.0 78 170-249 2-90 (256)
464 PF13659 Methyltransf_26: Meth 94.9 0.089 1.9E-06 39.4 6.1 95 170-270 1-114 (117)
465 PRK12814 putative NADPH-depend 94.9 0.15 3.2E-06 50.8 9.1 78 168-250 191-289 (652)
466 PRK06522 2-dehydropantoate 2-r 94.9 0.2 4.4E-06 44.6 9.4 95 172-273 2-102 (304)
467 PLN02490 MPBQ/MSBQ methyltrans 94.9 0.21 4.6E-06 45.1 9.3 98 168-272 112-216 (340)
468 PRK13255 thiopurine S-methyltr 94.9 0.37 8E-06 40.8 10.3 100 166-270 34-154 (218)
469 PRK14194 bifunctional 5,10-met 94.9 0.28 6E-06 43.4 9.7 95 149-274 138-234 (301)
470 PRK06171 sorbitol-6-phosphate 94.9 0.11 2.4E-06 45.2 7.5 76 169-249 8-87 (266)
471 PLN02986 cinnamyl-alcohol dehy 94.8 0.19 4.2E-06 45.2 9.1 38 169-207 4-42 (322)
472 PLN02336 phosphoethanolamine N 94.8 0.19 4.1E-06 48.1 9.4 103 163-272 260-370 (475)
473 PRK12779 putative bifunctional 94.8 0.1 2.2E-06 54.0 7.9 78 168-249 304-402 (944)
474 PRK11188 rrmJ 23S rRNA methylt 94.8 0.54 1.2E-05 39.5 11.1 97 167-270 49-164 (209)
475 PRK14027 quinate/shikimate deh 94.8 0.13 2.7E-06 45.5 7.5 44 168-211 125-168 (283)
476 PRK11064 wecC UDP-N-acetyl-D-m 94.8 0.44 9.6E-06 44.6 11.5 73 171-250 4-86 (415)
477 PRK11559 garR tartronate semia 94.8 0.37 8E-06 42.9 10.6 70 172-254 4-73 (296)
478 PRK07417 arogenate dehydrogena 94.8 0.22 4.8E-06 43.9 9.1 67 172-250 2-68 (279)
479 PRK05600 thiamine biosynthesis 94.7 0.26 5.7E-06 45.3 9.7 35 169-203 40-74 (370)
480 PRK13984 putative oxidoreducta 94.7 0.16 3.5E-06 50.2 8.9 78 167-249 280-378 (604)
481 PRK13403 ketol-acid reductoiso 94.7 0.41 8.8E-06 42.7 10.4 88 168-271 14-105 (335)
482 PRK00216 ubiE ubiquinone/menaq 94.7 0.18 3.9E-06 43.1 8.3 105 163-273 45-160 (239)
483 PF02737 3HCDH_N: 3-hydroxyacy 94.7 0.22 4.8E-06 40.7 8.3 39 172-211 1-39 (180)
484 PRK08642 fabG 3-ketoacyl-(acyl 94.7 0.23 5E-06 42.8 9.0 77 170-248 5-90 (253)
485 PRK14982 acyl-ACP reductase; P 94.7 0.17 3.7E-06 45.6 8.2 94 168-274 153-249 (340)
486 PRK09135 pteridine reductase; 94.7 0.26 5.5E-06 42.3 9.3 34 169-203 5-39 (249)
487 TIGR00091 tRNA (guanine-N(7)-) 94.7 0.65 1.4E-05 38.5 11.2 98 169-271 16-132 (194)
488 PRK05650 short chain dehydroge 94.7 0.21 4.4E-06 43.7 8.7 76 172-249 2-87 (270)
489 PRK15451 tRNA cmo(5)U34 methyl 94.7 0.22 4.9E-06 43.0 8.7 98 167-273 54-166 (247)
490 TIGR00446 nop2p NOL1/NOP2/sun 94.6 0.98 2.1E-05 39.5 12.7 101 164-271 66-199 (264)
491 PRK12938 acetyacetyl-CoA reduc 94.6 0.3 6.6E-06 41.9 9.6 79 169-249 2-91 (246)
492 PRK05565 fabG 3-ketoacyl-(acyl 94.6 0.22 4.8E-06 42.6 8.7 78 170-249 5-93 (247)
493 PRK09496 trkA potassium transp 94.6 0.3 6.5E-06 46.3 10.3 86 172-262 2-88 (453)
494 TIGR02415 23BDH acetoin reduct 94.6 0.21 4.7E-06 43.0 8.6 77 171-249 1-87 (254)
495 PRK06436 glycerate dehydrogena 94.6 0.24 5.2E-06 44.1 8.9 87 168-273 120-211 (303)
496 PRK05557 fabG 3-ketoacyl-(acyl 94.6 0.31 6.8E-06 41.6 9.6 79 169-249 4-93 (248)
497 PRK10901 16S rRNA methyltransf 94.6 0.52 1.1E-05 44.4 11.6 102 163-271 238-372 (427)
498 PF10727 Rossmann-like: Rossma 94.6 0.15 3.3E-06 38.9 6.6 78 171-262 11-90 (127)
499 cd01485 E1-1_like Ubiquitin ac 94.6 0.49 1.1E-05 39.4 10.2 34 170-203 19-52 (198)
500 PRK06997 enoyl-(acyl carrier p 94.5 0.27 5.8E-06 42.8 9.0 79 169-249 5-94 (260)
No 1
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=8e-66 Score=447.86 Aligned_cols=331 Identities=33% Similarity=0.522 Sum_probs=295.8
Q ss_pred chhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 018529 8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLE 87 (354)
Q Consensus 8 ~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 87 (354)
+++|||+.+.++++++++.+++.|+|+++||+|+|+|||+|++|++.++|..+...+|++||||++|+|+++|++|++|+
T Consensus 1 ~~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~~k 80 (339)
T COG1064 1 MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTGLK 80 (339)
T ss_pred CcceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCccCC
Confidence 57999999999999999999999999999999999999999999999999998888999999999999999999999999
Q ss_pred CCCEEEe-cccCCCCCCcccccCCCC----CCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhh
Q 018529 88 VGDHVLP-VFTGECGDCRHCRFSING----EPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL 162 (354)
Q Consensus 88 ~Gd~V~~-~~~~~~~~c~~c~~~~~~----~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~ 162 (354)
+||||.+ ++..+|++|.+|+.+.-. ....++..+|+||||+++|+.+++++|+++++++||.+.|+..|.|++|
T Consensus 81 ~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y~al- 159 (339)
T COG1064 81 VGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRAL- 159 (339)
T ss_pred CCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEeeeh-
Confidence 9999987 999999999999866422 3456667779999999999999999999999999999999999999996
Q ss_pred hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccE
Q 018529 163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDR 242 (354)
Q Consensus 163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dv 242 (354)
+..+++||++|+|+|+|++|.+++|+|+++|+ +|++++++++|++++++||++++++..+. +..+.+++. +|+
T Consensus 160 k~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~~~~~--~~~~~~~~~----~d~ 232 (339)
T COG1064 160 KKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVINSSDS--DALEAVKEI----ADA 232 (339)
T ss_pred hhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEEcCCc--hhhHHhHhh----CcE
Confidence 56999999999999999999999999999998 99999999999999999999999998733 366666654 999
Q ss_pred EEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCC
Q 018529 243 SVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELE 321 (354)
Q Consensus 243 v~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (354)
++|+++ +..++.+++.|+++ |+++++|.........++... +.+++++.|+..++. .++++++++..++++++.
T Consensus 233 ii~tv~-~~~~~~~l~~l~~~-G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~---~d~~e~l~f~~~g~Ikp~ 307 (339)
T COG1064 233 IIDTVG-PATLEPSLKALRRG-GTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTR---ADLEEALDFAAEGKIKPE 307 (339)
T ss_pred EEECCC-hhhHHHHHHHHhcC-CEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCCH---HHHHHHHHHHHhCCceee
Confidence 999999 79999999999998 999999988422223343443 449999999987653 689999999999977765
Q ss_pred CceeeeeccccHHHHHHHHhcCCc-eeEEEecC
Q 018529 322 KFITHRIPFSEINKAFEYMVKGEG-LRCIISME 353 (354)
Q Consensus 322 ~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~~ 353 (354)
+.+.++++|+++|++.|.+++. +|.||++.
T Consensus 308 --i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~ 338 (339)
T COG1064 308 --ILETIPLDEINEAYERMEKGKVRGRAVIDMS 338 (339)
T ss_pred --EEeeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence 4479999999999999999986 69999875
No 2
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=3.3e-64 Score=427.74 Aligned_cols=341 Identities=48% Similarity=0.866 Sum_probs=319.5
Q ss_pred hhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 018529 9 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV 88 (354)
Q Consensus 9 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 88 (354)
|++||.+.+++++|++++++++++|++|||+||+.|+|+|++|.....|..+.. +|.++|||++|+|++||+.|+++++
T Consensus 1 mk~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~-~P~vLGHEgAGiVe~VG~gVt~vkp 79 (366)
T COG1062 1 MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVLGHEGAGIVEAVGEGVTSVKP 79 (366)
T ss_pred CCceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC-CceecccccccEEEEecCCccccCC
Confidence 578999999999999999999999999999999999999999999999988876 9999999999999999999999999
Q ss_pred CCEEEecccCCCCCCcccccCCC-------------------------CCCcccccccccceeeEEeeccceEECCCCCC
Q 018529 89 GDHVLPVFTGECGDCRHCRFSIN-------------------------GEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP 143 (354)
Q Consensus 89 Gd~V~~~~~~~~~~c~~c~~~~~-------------------------~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~ 143 (354)
||+|+..+.-.|++|.+|..+.+ +...+++.+.++|+||..+++..++++++..+
T Consensus 80 GDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~p 159 (366)
T COG1062 80 GDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAP 159 (366)
T ss_pred CCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCCCCC
Confidence 99999999999999999954322 12335667778999999999999999999999
Q ss_pred ccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCC
Q 018529 144 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 223 (354)
Q Consensus 144 ~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~ 223 (354)
++.++.+.|.+.|.+.+..+.+++++|++|.|+|.|++|++++|-|+..|+.++|+++.+++|++++++||+.+++|..+
T Consensus 160 ~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~~ 239 (366)
T COG1062 160 LEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPKE 239 (366)
T ss_pred ccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCC
Q 018529 224 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPR 303 (354)
Q Consensus 224 ~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 303 (354)
.. +..+.+.+++++|+|.+|||+|+.+.+++++.+..+ ||+.+++|........++++..+...++++|++++.-..+
T Consensus 240 ~~-~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~-~G~~v~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G~~~p~ 317 (366)
T COG1062 240 VD-DVVEAIVELTDGGADYAFECVGNVEVMRQALEATHR-GGTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGARPR 317 (366)
T ss_pred hh-hHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhc-CCeEEEEecCCCCceeecChHHeeccceEEEEeecCCccc
Confidence 64 489999999999999999999999999999999999 6999999998888888888888887799999999999999
Q ss_pred CCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCceeEEEec
Q 018529 304 TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM 352 (354)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~~ 352 (354)
.++.+++++..+|++.+.++++++++|+|++|||+.+.+++..|.||.|
T Consensus 318 ~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~IR~Vi~~ 366 (366)
T COG1062 318 SDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSIRSVIRF 366 (366)
T ss_pred cchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCceeeEEecC
Confidence 9999999999999999999999999999999999999999999988865
No 3
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3e-62 Score=408.94 Aligned_cols=347 Identities=57% Similarity=1.036 Sum_probs=326.9
Q ss_pred ccchhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCC
Q 018529 6 GLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSD 85 (354)
Q Consensus 6 ~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~ 85 (354)
..+.++||.+.+++++||.++++.+++|+.+||+||+.++++|++|.+.+.|..+...+|.++|||.+|+|+.+|..|++
T Consensus 3 gkvI~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV~~ 82 (375)
T KOG0022|consen 3 GKVITCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGVTT 82 (375)
T ss_pred CCceEEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCccc
Confidence 46789999999999999999999999999999999999999999999999998777889999999999999999999999
Q ss_pred CCCCCEEEecccCCCCCCcccccCCC--------------------------CCCcccccccccceeeEEeeccceEECC
Q 018529 86 LEVGDHVLPVFTGECGDCRHCRFSIN--------------------------GEPVNHFLGTSTFSEYTVVHSGCVAKIN 139 (354)
Q Consensus 86 ~~~Gd~V~~~~~~~~~~c~~c~~~~~--------------------------~~~~~~~~~~g~~a~~~~v~~~~~~~~P 139 (354)
+++||+|+..+.-.|+.|.+|+.+-. +...|++.+..+|+||.+++...+.+++
T Consensus 83 vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId 162 (375)
T KOG0022|consen 83 VKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKID 162 (375)
T ss_pred cCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecC
Confidence 99999999999999999999942211 2345777777899999999999999999
Q ss_pred CCCCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEE
Q 018529 140 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV 219 (354)
Q Consensus 140 ~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~ 219 (354)
+..+++.++.|.|.+.|+|.|..+.+++++|+++.|+|.|++|+++++-|++.|+.++|++|.+++|.+.+++||+.+.+
T Consensus 163 ~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~i 242 (375)
T KOG0022|consen 163 PSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFI 242 (375)
T ss_pred CCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccC
Q 018529 220 NTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN 299 (354)
Q Consensus 220 ~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 299 (354)
|..+..+...+.+.+.|.+|+|+-|||+|+.+.+++++.+...+||.-+.+|....+....+.++.+.+.+++.|+.++.
T Consensus 243 Np~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~Gs~FGG 322 (375)
T KOG0022|consen 243 NPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWKGSAFGG 322 (375)
T ss_pred ChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEEEEeccc
Confidence 99855555889999999999999999999999999999999999999999999888888889999899999999999999
Q ss_pred CCCCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCceeEEEec
Q 018529 300 YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM 352 (354)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~~ 352 (354)
++.+.++..+++...++++.++++++|++||+++++||+.|.+++..|.||.+
T Consensus 323 ~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~GksiR~vl~~ 375 (375)
T KOG0022|consen 323 FKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSIRCVLWM 375 (375)
T ss_pred ccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceEEEEEeC
Confidence 99999999999999999999999999999999999999999999999998864
No 4
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.1e-60 Score=402.64 Aligned_cols=338 Identities=28% Similarity=0.452 Sum_probs=297.1
Q ss_pred hhcceeeeccCCCceEEEEeecCCC-CCCeEEEEEeeeecCccchhhhccCCCCC---CCCcccccceeEEEEEeCCCCC
Q 018529 9 LTCKAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQTP---LFPRIFGHEAAGVVESVGEGVS 84 (354)
Q Consensus 9 ~~~~a~~~~~~~~~l~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~~~~~~~---~~p~~~G~e~~G~V~~vG~~~~ 84 (354)
.+|+|+++.+++. +++.+.|.|++ .|+||+|++.++|||+||++.+.+..... +.|+++|||.+|+|.++|+.|+
T Consensus 3 ~~~~A~vl~g~~d-i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk 81 (354)
T KOG0024|consen 3 ADNLALVLRGKGD-IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVK 81 (354)
T ss_pred cccceeEEEccCc-eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccccc
Confidence 3789999999998 99999999987 99999999999999999999998755432 4799999999999999999999
Q ss_pred CCCCCCEEEecccCCCCCCcccccCC-CCCCccccccc----ccceeeEEeeccceEECCCCCCccchhhcccchhhhhh
Q 018529 85 DLEVGDHVLPVFTGECGDCRHCRFSI-NGEPVNHFLGT----STFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLG 159 (354)
Q Consensus 85 ~~~~Gd~V~~~~~~~~~~c~~c~~~~-~~~~~~~~~~~----g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~ 159 (354)
++++||||+..|..+|+.|.+|+.+. +-|....+... |++++|++.+++.++++|+++|++++|.+. +++.+||
T Consensus 82 ~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~e-PLsV~~H 160 (354)
T KOG0024|consen 82 HLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIE-PLSVGVH 160 (354)
T ss_pred ccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhccccc-chhhhhh
Confidence 99999999999999999999998775 44555555443 899999999999999999999999999887 7999999
Q ss_pred hhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCC--hhHHHHHHHHcC
Q 018529 160 ATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD--RPIQEVIAEMTN 237 (354)
Q Consensus 160 ~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~--~~~~~~i~~~~~ 237 (354)
| .+++++++|++|||+|+|++|++++..||++|+.+|+.++..++|++++++||++.+.+....+ .++.+.++....
T Consensus 161 A-cr~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~v~~~~g 239 (354)
T KOG0024|consen 161 A-CRRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQELAELVEKALG 239 (354)
T ss_pred h-hhhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHHHHHHHHhhcc
Confidence 9 6889999999999999999999999999999999999999999999999999999887776654 445566666655
Q ss_pred C-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCCCCHHHHHHHHHcc
Q 018529 238 G-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 316 (354)
Q Consensus 238 ~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~ 316 (354)
. .+|++|||+|....++.++.+++.+ |++++.+......+++.... ..++++++|++-+. ..++..+++++.+|
T Consensus 240 ~~~~d~~~dCsG~~~~~~aai~a~r~g-Gt~vlvg~g~~~~~fpi~~v-~~kE~~~~g~fry~---~~~y~~ai~li~sG 314 (354)
T KOG0024|consen 240 KKQPDVTFDCSGAEVTIRAAIKATRSG-GTVVLVGMGAEEIQFPIIDV-ALKEVDLRGSFRYC---NGDYPTAIELVSSG 314 (354)
T ss_pred ccCCCeEEEccCchHHHHHHHHHhccC-CEEEEeccCCCccccChhhh-hhheeeeeeeeeec---cccHHHHHHHHHcC
Confidence 4 6999999999989999999999997 99999998775555544333 45999999987322 24899999999999
Q ss_pred CCCCCCceeeeeccccHHHHHHHHhcCCc--eeEEEecCC
Q 018529 317 QLELEKFITHRIPFSEINKAFEYMVKGEG--LRCIISMED 354 (354)
Q Consensus 317 ~~~~~~~v~~~~~l~~~~~a~~~~~~~~~--~k~vi~~~d 354 (354)
++.++++++++|+++++.+||+.+.++.. .|++|..++
T Consensus 315 ki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~~ 354 (354)
T KOG0024|consen 315 KIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGPE 354 (354)
T ss_pred CcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCCC
Confidence 99999999999999999999999988874 599998754
No 5
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=1.1e-56 Score=413.66 Aligned_cols=348 Identities=52% Similarity=0.988 Sum_probs=299.2
Q ss_pred cccchhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCC
Q 018529 5 AGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGV 83 (354)
Q Consensus 5 ~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~ 83 (354)
.+.|++|||+++.++++++++++++.|+|+++||+|||.++|+|++|++.+.|..+. ..+|.++|||++|+|+++|+++
T Consensus 5 ~~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v 84 (381)
T PLN02740 5 QGKVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGV 84 (381)
T ss_pred cccceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCCC
Confidence 347889999999999877899999999999999999999999999999998876432 3568999999999999999999
Q ss_pred CCCCCCCEEEecccCCCCCCcccccCCC-CCCccc---------------------------ccccccceeeEEeeccce
Q 018529 84 SDLEVGDHVLPVFTGECGDCRHCRFSIN-GEPVNH---------------------------FLGTSTFSEYTVVHSGCV 135 (354)
Q Consensus 84 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~-~~~~~~---------------------------~~~~g~~a~~~~v~~~~~ 135 (354)
++|++||||++.+..+|+.|.+|+.+.. .|.++. ....|+|+||+.+|++.+
T Consensus 85 ~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~ 164 (381)
T PLN02740 85 EDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACV 164 (381)
T ss_pred CcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHe
Confidence 9999999999999999999999976542 222221 112589999999999999
Q ss_pred EECCCCCCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCC
Q 018529 136 AKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV 215 (354)
Q Consensus 136 ~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~ 215 (354)
+++|+++++++++.+++++.+||+++.+.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|+
T Consensus 165 ~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga 244 (381)
T PLN02740 165 VKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGI 244 (381)
T ss_pred EECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCC
Confidence 99999999999999999999999987778899999999999999999999999999998679999999999999999999
Q ss_pred ceEEcCCCCChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEE
Q 018529 216 TDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGT 295 (354)
Q Consensus 216 ~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~ 295 (354)
+.++++.+.+.++.+.+++++.+++|+|||++|++..+..+++++++++|+++.+|.......+.+....+.+++++.|+
T Consensus 245 ~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~ 324 (381)
T PLN02740 245 TDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRSITGS 324 (381)
T ss_pred cEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhcCCeEEEE
Confidence 99988776433477788888766899999999988899999999988339999999865333344444434578899998
Q ss_pred eccCCCCCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCceeEEEec
Q 018529 296 FFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM 352 (354)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~~ 352 (354)
+.+.+....++.++++++.++++++.++++++|+|+|+++|++.+.+++..|++|.+
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~~k~~~~~ 381 (381)
T PLN02740 325 VFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKALRCLLHL 381 (381)
T ss_pred ecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCceeEEEeC
Confidence 876655445789999999999998888899999999999999999988888998863
No 6
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1e-56 Score=377.67 Aligned_cols=335 Identities=26% Similarity=0.425 Sum_probs=289.6
Q ss_pred cccchhcceeeeccCCC--ceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCC
Q 018529 5 AGLILTCKAAVAWEAGK--PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEG 82 (354)
Q Consensus 5 ~~~~~~~~a~~~~~~~~--~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~ 82 (354)
...|.+.+++.+..++. ++++.+++.|+++++||+|+|+|||||++|++.+.|..+...+|.++|||++|+|+++|++
T Consensus 4 ~~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~VvkvGs~ 83 (360)
T KOG0023|consen 4 MSIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKVGSN 83 (360)
T ss_pred ccCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEECCC
Confidence 45899999999999998 5777999999999999999999999999999999999888899999999999999999999
Q ss_pred CCCCCCCCEE-EecccCCCCCCcccccCCC-CCC----------cccccccccceeeEEeeccceEECCCCCCccchhhc
Q 018529 83 VSDLEVGDHV-LPVFTGECGDCRHCRFSIN-GEP----------VNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCIL 150 (354)
Q Consensus 83 ~~~~~~Gd~V-~~~~~~~~~~c~~c~~~~~-~~~----------~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l 150 (354)
+++|++|||| +.....+|++|.+|..+.- .|+ ..+....|+|++|+++++.+++++|++++++.||.+
T Consensus 84 V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~aAPl 163 (360)
T KOG0023|consen 84 VTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASAAPL 163 (360)
T ss_pred cccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhccch
Confidence 9999999999 5778889999999975542 222 122333367999999999999999999999999999
Q ss_pred ccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh-hhHHHHHhcCCceEEcCCCCChhHH
Q 018529 151 SCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-KRFEEAKKFGVTDFVNTSEHDRPIQ 229 (354)
Q Consensus 151 ~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~ 229 (354)
.|+..|.|.+| ...++.||+++-|.|+|++|.+++|+||++|. +|++++++. +|.+.++.||++..++..++ +++.
T Consensus 164 LCaGITvYspL-k~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~~~LGAd~fv~~~~d-~d~~ 240 (360)
T KOG0023|consen 164 LCAGITVYSPL-KRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAIKSLGADVFVDSTED-PDIM 240 (360)
T ss_pred hhcceEEeehh-HHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHHHhcCcceeEEecCC-HHHH
Confidence 99999999995 66889999999999997799999999999999 999999887 67777888999988887643 3488
Q ss_pred HHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHH
Q 018529 230 EVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPS 308 (354)
Q Consensus 230 ~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~ 308 (354)
+.+...+++++|-|.+. ....++.++..++.+ |++|++|.+.. ...+.... .++.+.+.|+..++. .+.++
T Consensus 241 ~~~~~~~dg~~~~v~~~--a~~~~~~~~~~lk~~-Gt~V~vg~p~~--~~~~~~~~lil~~~~I~GS~vG~~---ket~E 312 (360)
T KOG0023|consen 241 KAIMKTTDGGIDTVSNL--AEHALEPLLGLLKVN-GTLVLVGLPEK--PLKLDTFPLILGRKSIKGSIVGSR---KETQE 312 (360)
T ss_pred HHHHHhhcCcceeeeec--cccchHHHHHHhhcC-CEEEEEeCcCC--cccccchhhhcccEEEEeeccccH---HHHHH
Confidence 88888887777777766 446789999999998 99999999875 33444443 448899999988765 68999
Q ss_pred HHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEecC
Q 018529 309 VVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME 353 (354)
Q Consensus 309 ~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~~ 353 (354)
+++++.++.+.+. .+..+++++++||+.+.+++- .|.||+++
T Consensus 313 ~Ldf~a~~~ik~~---IE~v~~~~v~~a~erm~kgdV~yRfVvD~s 355 (360)
T KOG0023|consen 313 ALDFVARGLIKSP---IELVKLSEVNEAYERMEKGDVRYRFVVDVS 355 (360)
T ss_pred HHHHHHcCCCcCc---eEEEehhHHHHHHHHHHhcCeeEEEEEEcc
Confidence 9999999977765 467899999999999999986 69999874
No 7
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=1.5e-55 Score=404.35 Aligned_cols=342 Identities=49% Similarity=0.899 Sum_probs=290.8
Q ss_pred cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018529 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90 (354)
Q Consensus 11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd 90 (354)
|||+++..++++++++++|.|+|+++||+|||.++|+|++|++.+.|..+...+|.++|||++|+|+++|+++++|++||
T Consensus 2 ~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd 81 (368)
T TIGR02818 2 SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKVGD 81 (368)
T ss_pred ceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCCCCC
Confidence 78999999888899999999999999999999999999999999888665456789999999999999999999999999
Q ss_pred EEEecccCCCCCCcccccCCCC-CCccc------------------------ccccccceeeEEeeccceEECCCCCCcc
Q 018529 91 HVLPVFTGECGDCRHCRFSING-EPVNH------------------------FLGTSTFSEYTVVHSGCVAKINPLAPLD 145 (354)
Q Consensus 91 ~V~~~~~~~~~~c~~c~~~~~~-~~~~~------------------------~~~~g~~a~~~~v~~~~~~~~P~~~~~~ 145 (354)
||++.+..+|++|.+|+.+... |..+. ..+.|+|+||+.+|++.++++|++++++
T Consensus 82 rV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~~ 161 (368)
T TIGR02818 82 HVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLE 161 (368)
T ss_pred EEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCCCCHH
Confidence 9999999999999999866432 22110 1124799999999999999999999999
Q ss_pred chhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCC
Q 018529 146 KVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD 225 (354)
Q Consensus 146 ~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~ 225 (354)
+++.+++++.+||+++.+.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++|++.++++.+.+
T Consensus 162 ~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~~ 241 (368)
T TIGR02818 162 EVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPNDYD 241 (368)
T ss_pred HhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEcccccc
Confidence 99999999999999987788999999999999999999999999999987799999999999999999999999877544
Q ss_pred hhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCCCC
Q 018529 226 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTD 305 (354)
Q Consensus 226 ~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~ 305 (354)
.++.+.+++++++++|++||++|++..+..+++++++++|+++.+|..............+.++..+.|+..+....+++
T Consensus 242 ~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 321 (368)
T TIGR02818 242 KPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVTGRVWRGSAFGGVKGRTE 321 (368)
T ss_pred hhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhccceEEEeeccCCCcHHH
Confidence 44677788887778999999999878899999999873399999997542222333333333445577776544333457
Q ss_pred HHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCceeEEEec
Q 018529 306 LPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM 352 (354)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~~ 352 (354)
+.++++++.++++++.++++++|+|+|+++||+.+.+++..|++|.+
T Consensus 322 ~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~k~~v~~ 368 (368)
T TIGR02818 322 LPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKSIRTVIHY 368 (368)
T ss_pred HHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCceeEEeeC
Confidence 89999999999998888899999999999999999888778999875
No 8
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=4.1e-55 Score=400.46 Aligned_cols=338 Identities=38% Similarity=0.633 Sum_probs=292.4
Q ss_pred hcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018529 10 TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (354)
Q Consensus 10 ~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~G 89 (354)
||||+++.+++++++++++|.|+|+++||+|||.++++|++|++.+.|..+ ..+|.++|||++|+|+++|+++++|++|
T Consensus 1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~G 79 (358)
T TIGR03451 1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN-DEFPFLLGHEAAGVVEAVGEGVTDVAPG 79 (358)
T ss_pred CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc-ccCCcccccceEEEEEEeCCCCcccCCC
Confidence 699999999998899999999999999999999999999999998877543 3468899999999999999999999999
Q ss_pred CEEEecccCCCCCCcccccCCCC-CCcc-----------c-----ccccccceeeEEeeccceEECCCCCCccchhhccc
Q 018529 90 DHVLPVFTGECGDCRHCRFSING-EPVN-----------H-----FLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSC 152 (354)
Q Consensus 90 d~V~~~~~~~~~~c~~c~~~~~~-~~~~-----------~-----~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~ 152 (354)
|+|++.+..+|+.|.+|..+... |... + ..+.|+|+||+.+|++.++++|+++++++|+.+++
T Consensus 80 drV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~l~~ 159 (358)
T TIGR03451 80 DYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGC 159 (358)
T ss_pred CEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHhhhhcc
Confidence 99999999999999999765432 2110 0 02358999999999999999999999999999999
Q ss_pred chhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHH
Q 018529 153 GVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVI 232 (354)
Q Consensus 153 ~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i 232 (354)
++.++|+++.+.+.+++|++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|++.++++.+.+ +.+.+
T Consensus 160 ~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~--~~~~i 237 (358)
T TIGR03451 160 GVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGTD--PVEAI 237 (358)
T ss_pred cchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCCcC--HHHHH
Confidence 9999998877788899999999999999999999999999996699999999999999999999999887654 77888
Q ss_pred HHHcCC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHHH
Q 018529 233 AEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVV 310 (354)
Q Consensus 233 ~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~ 310 (354)
++.+++ ++|+|||++|++..+..++++++++ |+++.+|.........+.... +.+++++.+++.+.....+++++++
T Consensus 238 ~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 316 (358)
T TIGR03451 238 RALTGGFGADVVIDAVGRPETYKQAFYARDLA-GTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLPERDFPMLV 316 (358)
T ss_pred HHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCCcHHHHHHHH
Confidence 888877 8999999999878899999999997 999999976433233444332 3488999988754333446789999
Q ss_pred HHHHccCCCCCCceeeeeccccHHHHHHHHhcCCceeEEEe
Q 018529 311 DMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS 351 (354)
Q Consensus 311 ~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~ 351 (354)
+++.+|++++.++++++|||+|+++||+.+.+++..|++|.
T Consensus 317 ~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~~ 357 (358)
T TIGR03451 317 DLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVLRSVVE 357 (358)
T ss_pred HHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcceeEEe
Confidence 99999999888889999999999999999998887788775
No 9
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=4.2e-55 Score=402.17 Aligned_cols=342 Identities=76% Similarity=1.274 Sum_probs=296.2
Q ss_pred hhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 018529 9 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV 88 (354)
Q Consensus 9 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 88 (354)
|+|||+++.+++++++++++++|+|+++||+|||.++++|++|++.+.|..+...+|.++|||++|+|+++|+++++|++
T Consensus 1 ~~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 80 (369)
T cd08301 1 ITCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLKP 80 (369)
T ss_pred CccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCcccc
Confidence 48999999998888999999999999999999999999999999998886655567899999999999999999999999
Q ss_pred CCEEEecccCCCCCCcccccCCCC-CCccc-------------------------ccccccceeeEEeeccceEECCCCC
Q 018529 89 GDHVLPVFTGECGDCRHCRFSING-EPVNH-------------------------FLGTSTFSEYTVVHSGCVAKINPLA 142 (354)
Q Consensus 89 Gd~V~~~~~~~~~~c~~c~~~~~~-~~~~~-------------------------~~~~g~~a~~~~v~~~~~~~~P~~~ 142 (354)
||||++.+..+|++|++|..+... |..+. +...|+|+||+.+++..++++|+++
T Consensus 81 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~ 160 (369)
T cd08301 81 GDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEA 160 (369)
T ss_pred CCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCCC
Confidence 999999999999999999766432 22211 1134789999999999999999999
Q ss_pred CccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCC
Q 018529 143 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 222 (354)
Q Consensus 143 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~ 222 (354)
++++++.+++++.++|+++.+..++++|++|||+|+|++|++++|+|+.+|+.+|+++++++++.++++++|++.++++.
T Consensus 161 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~~ 240 (369)
T cd08301 161 PLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPK 240 (369)
T ss_pred CHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEccc
Confidence 99999999999999999887888999999999999999999999999999986799999999999999999999888876
Q ss_pred CCChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCC
Q 018529 223 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP 302 (354)
Q Consensus 223 ~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 302 (354)
+.+..+.+.+++++++++|++||++|+...+..+++++++++|+++.+|.........+....+.+++++.|++.+.+..
T Consensus 241 ~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 320 (369)
T cd08301 241 DHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLNGRTLKGTLFGGYKP 320 (369)
T ss_pred ccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHhcCCeEEEEecCCCCh
Confidence 54334777788877668999999999877889999999993299999998653333444444455789999988766655
Q ss_pred CCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCceeEEE
Q 018529 303 RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII 350 (354)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi 350 (354)
+.+++++++++.++++++.+.++++|||+|+++||+.+.+++..|++|
T Consensus 321 ~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~ 368 (369)
T cd08301 321 KTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECLRCIL 368 (369)
T ss_pred HHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCceeEEe
Confidence 567899999999999888888899999999999999999998888886
No 10
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=5.6e-55 Score=401.29 Aligned_cols=336 Identities=41% Similarity=0.715 Sum_probs=289.7
Q ss_pred cceeeeccCCC--------ceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCC
Q 018529 11 CKAAVAWEAGK--------PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEG 82 (354)
Q Consensus 11 ~~a~~~~~~~~--------~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~ 82 (354)
|||+++.++|. .++++++|.|+|+++||+|||.+++||++|++.+.|..+ ..+|.++|||++|+|+++|++
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~ 79 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP-RPLPMALGHEAAGVVVEVGEG 79 (371)
T ss_pred CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC-CCCCccCCccceeEEEEeCCC
Confidence 79999998763 389999999999999999999999999999999887543 346899999999999999999
Q ss_pred CCCCCCCCEEEecccCCCCCCcccccCCCC-CCccc------------------------ccccccceeeEEeeccceEE
Q 018529 83 VSDLEVGDHVLPVFTGECGDCRHCRFSING-EPVNH------------------------FLGTSTFSEYTVVHSGCVAK 137 (354)
Q Consensus 83 ~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~-~~~~~------------------------~~~~g~~a~~~~v~~~~~~~ 137 (354)
++++++||||++.+..+|+.|..|+.+... |.... ..+.|+|+||+.+|++.+++
T Consensus 80 v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~~ 159 (371)
T cd08281 80 VTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVK 159 (371)
T ss_pred CCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccceEE
Confidence 999999999999888899999999866432 22110 11237999999999999999
Q ss_pred CCCCCCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCce
Q 018529 138 INPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD 217 (354)
Q Consensus 138 ~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~ 217 (354)
+|+++++++|+.+++++++||+++.+.+++++|++|||+|+|++|++++|+|+..|+++|++++++++|+++++++|++.
T Consensus 160 lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~ 239 (371)
T cd08281 160 IDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATA 239 (371)
T ss_pred CCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCce
Confidence 99999999999999999999999878889999999999999999999999999999967999999999999999999999
Q ss_pred EEcCCCCChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhh-ccccEEEEEe
Q 018529 218 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTF 296 (354)
Q Consensus 218 v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~ 296 (354)
++++.+.+ +.+.+++++.+++|+||||+|.+..+..++++++++ |+++.+|.........+....+ .+++++.|++
T Consensus 240 ~i~~~~~~--~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~ 316 (371)
T cd08281 240 TVNAGDPN--AVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEARLSVPALSLVAEERTLKGSY 316 (371)
T ss_pred EeCCCchh--HHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEccCCCCceeeecHHHHhhcCCEEEEEe
Confidence 99887654 778888887768999999999878999999999997 9999999764323334444433 4899999988
Q ss_pred ccCCCCCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCceeEEE
Q 018529 297 FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII 350 (354)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi 350 (354)
.+.+..++++.++++++.++++++.++++++|+|+|+++||+.+.+++..|+||
T Consensus 317 ~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi 370 (371)
T cd08281 317 MGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVI 370 (371)
T ss_pred cCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeee
Confidence 765544567899999999999998888999999999999999999988765554
No 11
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=9.2e-55 Score=399.44 Aligned_cols=342 Identities=56% Similarity=0.966 Sum_probs=293.0
Q ss_pred hcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018529 10 TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (354)
Q Consensus 10 ~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~G 89 (354)
+|||+++...++++++++.|.|+|+++||+|||.++|+|++|++.+.|..+...+|.++|||++|+|+++|+++++|++|
T Consensus 2 ~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vG 81 (368)
T cd08300 2 TCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKPG 81 (368)
T ss_pred cceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCCCC
Confidence 68999999888889999999999999999999999999999999988766555679999999999999999999999999
Q ss_pred CEEEecccCCCCCCcccccCCCCCCc-c------------------------cccccccceeeEEeeccceEECCCCCCc
Q 018529 90 DHVLPVFTGECGDCRHCRFSINGEPV-N------------------------HFLGTSTFSEYTVVHSGCVAKINPLAPL 144 (354)
Q Consensus 90 d~V~~~~~~~~~~c~~c~~~~~~~~~-~------------------------~~~~~g~~a~~~~v~~~~~~~~P~~~~~ 144 (354)
|+|++.+..+|++|.+|+.+....+. . ...+.|+|+||+.++++.++++|+++++
T Consensus 82 drV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~ 161 (368)
T cd08300 82 DHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAPL 161 (368)
T ss_pred CEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCCCCCh
Confidence 99999999999999999866533221 1 0113479999999999999999999999
Q ss_pred cchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCC
Q 018529 145 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 224 (354)
Q Consensus 145 ~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~ 224 (354)
++++.+++++.+||+++.+.+.+++|++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++|+++++++.+.
T Consensus 162 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~~~ 241 (368)
T cd08300 162 DKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKDH 241 (368)
T ss_pred hhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEccccc
Confidence 99999999999999998778899999999999999999999999999999779999999999999999999999988765
Q ss_pred ChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCCC
Q 018529 225 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRT 304 (354)
Q Consensus 225 ~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~ 304 (354)
++++.+.+++++++++|+|||++|++..+..+++++++++|+++.+|..............+.+...+.++..+.+..++
T Consensus 242 ~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 321 (368)
T cd08300 242 DKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRVWKGTAFGGWKSRS 321 (368)
T ss_pred chHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHhhcCeEEEEEecccCcHH
Confidence 33477888888877999999999987789999999977349999999764222233333333345577777666565567
Q ss_pred CHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCceeEEEe
Q 018529 305 DLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS 351 (354)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~ 351 (354)
++.++++++.++++++.++++++|+|+|+++||+.+.+++..|++|.
T Consensus 322 ~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~~k~~~~ 368 (368)
T cd08300 322 QVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKSIRTVVK 368 (368)
T ss_pred HHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCCceeeeC
Confidence 89999999999999888889999999999999999988887888863
No 12
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=4e-54 Score=395.52 Aligned_cols=342 Identities=56% Similarity=1.013 Sum_probs=291.4
Q ss_pred hhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 018529 9 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV 88 (354)
Q Consensus 9 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 88 (354)
..|||+++.++++.++++++|.|+|+++||+|||.++|+|++|++.+.+.. .+|.++|||++|+|+++|+++++|++
T Consensus 11 ~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~---~~p~i~GhE~~G~V~~vG~~v~~~~~ 87 (378)
T PLN02827 11 ITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA---LFPRIFGHEASGIVESIGEGVTEFEK 87 (378)
T ss_pred ceeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC---CCCeeecccceEEEEEcCCCCcccCC
Confidence 479999999888779999999999999999999999999999999886632 45889999999999999999999999
Q ss_pred CCEEEecccCCCCCCcccccCCCC-CCcccc------------------------cccccceeeEEeeccceEECCCCCC
Q 018529 89 GDHVLPVFTGECGDCRHCRFSING-EPVNHF------------------------LGTSTFSEYTVVHSGCVAKINPLAP 143 (354)
Q Consensus 89 Gd~V~~~~~~~~~~c~~c~~~~~~-~~~~~~------------------------~~~g~~a~~~~v~~~~~~~~P~~~~ 143 (354)
||+|++.+..+|++|.+|+.+... |..+.. ...|+|+||+.+|++.++++|++++
T Consensus 88 GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~l~ 167 (378)
T PLN02827 88 GDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAP 167 (378)
T ss_pred CCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEECCCCCC
Confidence 999999999999999999866432 221110 0238999999999999999999999
Q ss_pred ccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCC
Q 018529 144 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 223 (354)
Q Consensus 144 ~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~ 223 (354)
+++++.+++++.++|+++.+.+++++|++|||+|+|++|++++|+|+.+|+..|+++++++++.++++++|++.++++.+
T Consensus 168 ~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~i~~~~ 247 (378)
T PLN02827 168 LHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINPND 247 (378)
T ss_pred HHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEcccc
Confidence 99999999899999988777788999999999999999999999999999967889988999999999999999998775
Q ss_pred CChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCC
Q 018529 224 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPR 303 (354)
Q Consensus 224 ~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 303 (354)
.+.++.+.+++++++++|+|||++|.+..+..+++.+++++|+++.+|.......+......+.+++++.|++...+...
T Consensus 248 ~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 327 (378)
T PLN02827 248 LSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGSLFGGWKPK 327 (378)
T ss_pred cchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEeeecCCCchh
Confidence 43347778888876689999999998778899999998833999999986533222222223458999999887655445
Q ss_pred CCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCceeEEEecC
Q 018529 304 TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISME 353 (354)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~~~ 353 (354)
.++.++++++.++++++.++++++|+|+|+.+|++.+.+++..|.||.++
T Consensus 328 ~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~~k~vi~~~ 377 (378)
T PLN02827 328 SDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKCLRCVIHMP 377 (378)
T ss_pred hhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCceEEEEEec
Confidence 57899999999999988778999999999999999999888789999875
No 13
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=3.7e-53 Score=385.31 Aligned_cols=332 Identities=29% Similarity=0.452 Sum_probs=283.9
Q ss_pred cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCCCCCC
Q 018529 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (354)
Q Consensus 11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~~~G 89 (354)
|||+++.+++. +++++++.|+|+++||+||+.++++|++|++.+.+.... ..+|.++|||++|+|+++|++++++++|
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 79 (339)
T cd08239 1 MRGAVFPGDRT-VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFRVG 79 (339)
T ss_pred CeEEEEecCCc-eEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCCCC
Confidence 79999987765 999999999999999999999999999999987765332 3358899999999999999999999999
Q ss_pred CEEEecccCCCCCCcccccCCCCCCc-----ccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhh
Q 018529 90 DHVLPVFTGECGDCRHCRFSINGEPV-----NHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV 164 (354)
Q Consensus 90 d~V~~~~~~~~~~c~~c~~~~~~~~~-----~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~ 164 (354)
|+|++.+..+|++|++|+.+....+. ++....|+|+||+.+|++.++++|+++++++|+.+++++.|||+++ ..
T Consensus 80 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l-~~ 158 (339)
T cd08239 80 DRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHAL-RR 158 (339)
T ss_pred CEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHHHH-Hh
Confidence 99999999999999999766533221 2333469999999999999999999999999999999999999996 56
Q ss_pred cCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEE
Q 018529 165 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRS 243 (354)
Q Consensus 165 ~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv 243 (354)
..+++|++|||+|+|++|++++|+|+.+|+++|+++++++++.++++++|++.++++.+.+ .+.+.+++++ ++|+|
T Consensus 159 ~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~~---~~~~~~~~~~~~~d~v 235 (339)
T cd08239 159 VGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDD---VQEIRELTSGAGADVA 235 (339)
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCcch---HHHHHHHhCCCCCCEE
Confidence 7889999999999999999999999999995599999999999999999999999886542 4567777766 89999
Q ss_pred EEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCc
Q 018529 244 VECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKF 323 (354)
Q Consensus 244 ~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (354)
||++|+...+..++++++++ |+++.+|.... .........+.+++++.|++... .++++++++++.++++.+.+.
T Consensus 236 id~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~~~~g~i~~~~~ 310 (339)
T cd08239 236 IECSGNTAARRLALEAVRPW-GRLVLVGEGGE-LTIEVSNDLIRKQRTLIGSWYFS---VPDMEECAEFLARHKLEVDRL 310 (339)
T ss_pred EECCCCHHHHHHHHHHhhcC-CEEEEEcCCCC-cccCcHHHHHhCCCEEEEEecCC---HHHHHHHHHHHHcCCCChhHe
Confidence 99999977778999999997 99999997542 22222222345899999987543 257899999999999988888
Q ss_pred eeeeeccccHHHHHHHHhcCCceeEEEec
Q 018529 324 ITHRIPFSEINKAFEYMVKGEGLRCIISM 352 (354)
Q Consensus 324 v~~~~~l~~~~~a~~~~~~~~~~k~vi~~ 352 (354)
++++|+|+|+++||+.+.++..+|+||.+
T Consensus 311 i~~~~~l~~~~~a~~~~~~~~~gKvvi~~ 339 (339)
T cd08239 311 VTHRFGLDQAPEAYALFAQGESGKVVFVF 339 (339)
T ss_pred EEEEecHHHHHHHHHHHHcCCceEEEEeC
Confidence 99999999999999999887778998864
No 14
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=5.8e-53 Score=387.11 Aligned_cols=341 Identities=57% Similarity=0.992 Sum_probs=291.8
Q ss_pred hhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 018529 9 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV 88 (354)
Q Consensus 9 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 88 (354)
++|||+++...+++++++++|.|.++++||+|||.++++|++|++.+.|..+ ..+|.++|||++|+|+++|++++++++
T Consensus 1 ~~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~ 79 (365)
T cd08277 1 IKCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-TLFPVILGHEGAGIVESVGEGVTNLKP 79 (365)
T ss_pred CccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC-CCCCeecccceeEEEEeeCCCCccCCC
Confidence 4689999998888899999999999999999999999999999999877543 456899999999999999999999999
Q ss_pred CCEEEecccCCCCCCcccccCCCCCC-ccc-----------------------ccccccceeeEEeeccceEECCCCCCc
Q 018529 89 GDHVLPVFTGECGDCRHCRFSINGEP-VNH-----------------------FLGTSTFSEYTVVHSGCVAKINPLAPL 144 (354)
Q Consensus 89 Gd~V~~~~~~~~~~c~~c~~~~~~~~-~~~-----------------------~~~~g~~a~~~~v~~~~~~~~P~~~~~ 144 (354)
||+|++.+..+|++|.+|..+....+ ... +.+.|+|+||+.++++.++++|+++++
T Consensus 80 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~~ 159 (365)
T cd08277 80 GDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPL 159 (365)
T ss_pred CCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCCCCH
Confidence 99999999999999999976543221 110 113589999999999999999999999
Q ss_pred cchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCC
Q 018529 145 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 224 (354)
Q Consensus 145 ~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~ 224 (354)
++++.+++++.+||+++.+.+.+++|++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++|++++++..+.
T Consensus 160 ~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~~~ 239 (365)
T cd08277 160 EHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKDS 239 (365)
T ss_pred HHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEeccccc
Confidence 99999999999999987778899999999999999999999999999999779999999999999999999999887664
Q ss_pred ChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCCC
Q 018529 225 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRT 304 (354)
Q Consensus 225 ~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~ 304 (354)
+..+.+.+++++++++|+|||++|+...+..+++++++.+|+++.+|.... ....+....+..++++.|++.+.+..+.
T Consensus 240 ~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~ 318 (365)
T cd08277 240 DKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPG-AELSIRPFQLILGRTWKGSFFGGFKSRS 318 (365)
T ss_pred cchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCc-cccccCHhHHhhCCEEEeeecCCCChHH
Confidence 434667777777678999999999878889999999773399999997642 2233344344458899998876665456
Q ss_pred CHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCceeEEEe
Q 018529 305 DLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS 351 (354)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~ 351 (354)
++.++++++.++++.+.++++++|+|+|+++||+.+.+++..|++|+
T Consensus 319 ~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~i~ 365 (365)
T cd08277 319 DVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGECIRTVIT 365 (365)
T ss_pred HHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCCceEeeC
Confidence 78999999999998888889999999999999999988877788874
No 15
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=1.2e-52 Score=374.82 Aligned_cols=315 Identities=27% Similarity=0.382 Sum_probs=266.9
Q ss_pred cceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccC-CCCCCCCcccccceeEEEEEeCCCCCCCC
Q 018529 11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQTPLFPRIFGHEAAGVVESVGEGVSDLE 87 (354)
Q Consensus 11 ~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~-~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 87 (354)
|||+++.+.+.+ +++.++|.|.|++|||||||.++|+|+.|.....|. .+...+|+++|.|++|+|+++|+++++|+
T Consensus 1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~ 80 (326)
T COG0604 1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK 80 (326)
T ss_pred CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence 789999988876 889999999999999999999999999999999886 33456899999999999999999999999
Q ss_pred CCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCC
Q 018529 88 VGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKP 167 (354)
Q Consensus 88 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~ 167 (354)
+||||+... ..| ..|+|+||+.+|++.++++|+++|+++||++++++.|||+++....++
T Consensus 81 ~GdrV~~~~-~~~-------------------~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l 140 (326)
T COG0604 81 VGDRVAALG-GVG-------------------RDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGL 140 (326)
T ss_pred CCCEEEEcc-CCC-------------------CCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999763 110 358999999999999999999999999999999999999999888999
Q ss_pred CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEEE
Q 018529 168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVE 245 (354)
Q Consensus 168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d 245 (354)
++|++|||+|+ |++|.+++|+||++|+ .++++.+++++.++++++|++++++|.+.+ +.+++++++++ ++|+|||
T Consensus 141 ~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~--~~~~v~~~t~g~gvDvv~D 217 (326)
T COG0604 141 KPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVINYREED--FVEQVRELTGGKGVDVVLD 217 (326)
T ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEcCCccc--HHHHHHHHcCCCCceEEEE
Confidence 99999999986 9999999999999998 677777788888899999999999998887 99999999998 9999999
Q ss_pred cccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhc-cccEEEEEeccCC---CCCCCHHHHHHHHHccCCCCC
Q 018529 246 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNY---KPRTDLPSVVDMYMNKQLELE 321 (354)
Q Consensus 246 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 321 (354)
++|+ +.+..++++|+++ |+++.+|...+.....++...+. +.+++.|.+.... ...+.+.++.+++.+|++++.
T Consensus 218 ~vG~-~~~~~~l~~l~~~-G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~ 295 (326)
T COG0604 218 TVGG-DTFAASLAALAPG-GRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKLKPV 295 (326)
T ss_pred CCCH-HHHHHHHHHhccC-CEEEEEecCCCCCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHHHcCCCcce
Confidence 9999 7888899999998 99999998763222233333333 7777777765433 112356778999999966655
Q ss_pred CceeeeeccccHHHHHHHHhcC-C-ceeEEEec
Q 018529 322 KFITHRIPFSEINKAFEYMVKG-E-GLRCIISM 352 (354)
Q Consensus 322 ~~v~~~~~l~~~~~a~~~~~~~-~-~~k~vi~~ 352 (354)
+.++|||+|..++..+.... + .+|+||.+
T Consensus 296 --i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 296 --IDRVYPLAEAPAAAAHLLLERRTTGKVVLKV 326 (326)
T ss_pred --eccEechhhhHHHHHHHHcccCCcceEEEeC
Confidence 77899999966666654433 4 47999864
No 16
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=5.5e-52 Score=377.62 Aligned_cols=328 Identities=20% Similarity=0.320 Sum_probs=270.9
Q ss_pred chhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhcc-CCC--CCCCCcccccceeEEEEEeCCCCC
Q 018529 8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWES-KGQ--TPLFPRIFGHEAAGVVESVGEGVS 84 (354)
Q Consensus 8 ~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~-~~~--~~~~p~~~G~e~~G~V~~vG~~~~ 84 (354)
...+||.+++++++ +++++.+.| ++++||||||.++|||++|++.+.+ ... ...+|.++|||++|+|+++ +++
T Consensus 2 ~~~~~~~~~~~~~~-~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~ 77 (343)
T PRK09880 2 QVKTQSCVVAGKKD-VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSS 77 (343)
T ss_pred cccceEEEEecCCc-eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCc
Confidence 34689999998888 999999997 6899999999999999999998753 222 2356899999999999999 678
Q ss_pred CCCCCCEEEecccCCCCCCcccccCCCC-CCcccc--------cccccceeeEEeeccceEECCCCCCccchhhcccchh
Q 018529 85 DLEVGDHVLPVFTGECGDCRHCRFSING-EPVNHF--------LGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVS 155 (354)
Q Consensus 85 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~-~~~~~~--------~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ 155 (354)
+|++||||+..+..+|++|.+|..+... |..... ...|+|+||++++++.++++|+++++++++ +..+++
T Consensus 78 ~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa-~~~~~~ 156 (343)
T PRK09880 78 GLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMA-FAEPLA 156 (343)
T ss_pred cCCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHH-hhcHHH
Confidence 9999999999999999999999766432 222111 135999999999999999999999987655 445788
Q ss_pred hhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHH
Q 018529 156 TGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEM 235 (354)
Q Consensus 156 ~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~ 235 (354)
+||+++ ......+|++|+|+|+|++|++++|+|+.+|+++|++++++++|+++++++|++.++++.+.+ +.+.. +.
T Consensus 157 ~a~~al-~~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~--~~~~~-~~ 232 (343)
T PRK09880 157 VAIHAA-HQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQNDD--LDHYK-AE 232 (343)
T ss_pred HHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCccc--HHHHh-cc
Confidence 999986 445667899999999999999999999999997799999999999999999999999887654 43322 22
Q ss_pred cCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHHHHHHH
Q 018529 236 TNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYM 314 (354)
Q Consensus 236 ~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~ 314 (354)
.+++|+|||++|++..+..++++++++ |+++.+|...... .+.... +.+++++.|++.. .++++++++++.
T Consensus 233 -~g~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~--~~~~~~~~~k~~~i~g~~~~----~~~~~~~~~l~~ 304 (343)
T PRK09880 233 -KGYFDVSFEVSGHPSSINTCLEVTRAK-GVMVQVGMGGAPP--EFPMMTLIVKEISLKGSFRF----TEEFNTAVSWLA 304 (343)
T ss_pred -CCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCC--ccCHHHHHhCCcEEEEEeec----cccHHHHHHHHH
Confidence 236999999999977899999999997 9999999754322 233332 3588999988642 357999999999
Q ss_pred ccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529 315 NKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 352 (354)
Q Consensus 315 ~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~ 352 (354)
++++++.++++++|+|+|+++|++.+.+++. +|++|++
T Consensus 305 ~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 305 NGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred cCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 9999888889999999999999999988765 7998864
No 17
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=5.1e-51 Score=369.25 Aligned_cols=334 Identities=29% Similarity=0.418 Sum_probs=274.5
Q ss_pred cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCc-ccccceeEEEEEeCCCCCCCCCC
Q 018529 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPR-IFGHEAAGVVESVGEGVSDLEVG 89 (354)
Q Consensus 11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~-~~G~e~~G~V~~vG~~~~~~~~G 89 (354)
|++++++.++...++++.+.|.+.++||+|||.++|||+||++.+++..+....|. ++|||++|+|+++| .++.+++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~G 79 (350)
T COG1063 1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVG 79 (350)
T ss_pred CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCCCC
Confidence 67777777776455777777778999999999999999999999999777666666 99999999999999 77789999
Q ss_pred CEEEecccCCCCCCcccccCCC-CCCccc---cc-----ccccceeeEEeeccceEE-CCCCCCccchhhcccchhhhhh
Q 018529 90 DHVLPVFTGECGDCRHCRFSIN-GEPVNH---FL-----GTSTFSEYTVVHSGCVAK-INPLAPLDKVCILSCGVSTGLG 159 (354)
Q Consensus 90 d~V~~~~~~~~~~c~~c~~~~~-~~~~~~---~~-----~~g~~a~~~~v~~~~~~~-~P~~~~~~~aa~l~~~~~~a~~ 159 (354)
|||++.|..+|++|++|+.+.. .|.+.. .. ..|+|+||+.+|.+.+++ +|+++ ..+++++..+++++|+
T Consensus 80 drVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~-~~~~aal~epla~~~~ 158 (350)
T COG1063 80 DRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGI-DEEAAALTEPLATAYH 158 (350)
T ss_pred CEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCC-ChhhhhhcChhhhhhh
Confidence 9999999999999999987653 333211 11 358999999999755555 58888 6667777779999987
Q ss_pred hhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCceEEcCCCCChhHHHHHHHHcCC
Q 018529 160 ATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNG 238 (354)
Q Consensus 160 ~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~i~~~~~~ 238 (354)
+.-.....+++++|+|+|+|++|++++++|+.+|+.+|++++.+++|++++++ .|++.+++..+. +..+.+.+.+++
T Consensus 159 ~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~--~~~~~~~~~t~g 236 (350)
T COG1063 159 GHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSED--DAGAEILELTGG 236 (350)
T ss_pred hhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccc--cHHHHHHHHhCC
Confidence 74445555666699999999999999999999999999999999999999999 666666655444 377788889988
Q ss_pred -CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecch-hhhccccEEEEEeccCCCCCCCHHHHHHHHHcc
Q 018529 239 -GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 316 (354)
Q Consensus 239 -~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~ 316 (354)
++|++|||+|.+..++.+++.++++ |+++++|....... .+.. ..+.+++++.|++. ...+.+++.+++++.+|
T Consensus 237 ~g~D~vie~~G~~~~~~~ai~~~r~g-G~v~~vGv~~~~~~-~~~~~~~~~kel~l~gs~~--~~~~~~~~~~~~ll~~g 312 (350)
T COG1063 237 RGADVVIEAVGSPPALDQALEALRPG-GTVVVVGVYGGEDI-PLPAGLVVSKELTLRGSLR--PSGREDFERALDLLASG 312 (350)
T ss_pred CCCCEEEECCCCHHHHHHHHHHhcCC-CEEEEEeccCCccC-ccCHHHHHhcccEEEeccC--CCCcccHHHHHHHHHcC
Confidence 9999999999988999999999997 99999999864432 2322 33559999999842 23345799999999999
Q ss_pred CCCCCCceeeeeccccHHHHHHHHhcCCc--eeEEEec
Q 018529 317 QLELEKFITHRIPFSEINKAFEYMVKGEG--LRCIISM 352 (354)
Q Consensus 317 ~~~~~~~v~~~~~l~~~~~a~~~~~~~~~--~k~vi~~ 352 (354)
++.+..+++++++++|+++||+.+.+.+. .|++|.+
T Consensus 313 ~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 313 KIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred CCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 99999999999999999999999987553 5888763
No 18
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=5e-51 Score=375.56 Aligned_cols=335 Identities=23% Similarity=0.315 Sum_probs=268.0
Q ss_pred hcceeeeccCCCceEEEEeecCCCC-------CCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCC
Q 018529 10 TCKAAVAWEAGKPLIIQDVEVAPPQ-------AMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEG 82 (354)
Q Consensus 10 ~~~a~~~~~~~~~l~~~~~~~p~~~-------~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~ 82 (354)
-|||+++.++++ ++++++|.|+|+ +|||||||.++|||++|++++.|..+ ..+|.++|||++|+|+++|++
T Consensus 2 ~mka~v~~~~~~-~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~ 79 (393)
T TIGR02819 2 GNRGVVYLGPGK-VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT-APTGLVLGHEITGEVIEKGRD 79 (393)
T ss_pred CceEEEEecCCc-eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC-CCCCccccceeEEEEEEEcCc
Confidence 489999988886 999999999874 68999999999999999999877543 356899999999999999999
Q ss_pred CCCCCCCCEEEecccCCCCCCcccccCCCCCCcc----------cc----cccccceeeEEeecc--ceEECCCCCCc--
Q 018529 83 VSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVN----------HF----LGTSTFSEYTVVHSG--CVAKINPLAPL-- 144 (354)
Q Consensus 83 ~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~----------~~----~~~g~~a~~~~v~~~--~~~~~P~~~~~-- 144 (354)
+++|++||||++.+..+|++|++|+.+....+.. ++ ...|+|+||+.+|+. .++++|++++.
T Consensus 80 V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~~~~~~~ 159 (393)
T TIGR02819 80 VEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDRDQALE 159 (393)
T ss_pred cccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECCCcccccc
Confidence 9999999999999999999999998775432221 11 024899999999974 79999998754
Q ss_pred --cchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCC
Q 018529 145 --DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 222 (354)
Q Consensus 145 --~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~ 222 (354)
.+++.+.+++.++|+++ ...++++|++|||.|+|++|++++|+|+.+|++.|++++++++|+++++++|++. +++.
T Consensus 160 ~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~Ga~~-v~~~ 237 (393)
T TIGR02819 160 KIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGCET-VDLS 237 (393)
T ss_pred cccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHcCCeE-EecC
Confidence 34677788999999985 5688999999999989999999999999999966777788899999999999974 4443
Q ss_pred CCChhHHHHHHHHcCC-CccEEEEcccCh--------------HhHHHHHHHhhCCCceEEEEcCCCCCceee-------
Q 018529 223 EHDRPIQEVIAEMTNG-GVDRSVECTGNI--------------DNMISAFECVHDGWGVAVLVGVPSKDAVFM------- 280 (354)
Q Consensus 223 ~~~~~~~~~i~~~~~~-~~dvv~d~~g~~--------------~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~------- 280 (354)
.. .++.+.+.+++.+ ++|++||++|.+ ..++.+++.++++ |+++++|.........
T Consensus 238 ~~-~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~i~~~G~~~~~~~~~~~~~~~~ 315 (393)
T TIGR02819 238 KD-ATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVG-GAIGIPGLYVTEDPGAVDAAAKT 315 (393)
T ss_pred Cc-ccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCC-CEEEEeeecCCcccccccccccc
Confidence 22 1266778888776 899999999985 3799999999997 9999999863211111
Q ss_pred ----cchhh-hccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCcee-eeeccccHHHHHHHHhcCCceeEEEecC
Q 018529 281 ----TKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFIT-HRIPFSEINKAFEYMVKGEGLRCIISME 353 (354)
Q Consensus 281 ----~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~l~~~~~a~~~~~~~~~~k~vi~~~ 353 (354)
+.... +.+++++.+.. ....+.+.++++++.++++++.++++ ++|+|+|+++||+.+.++..+|++|+++
T Consensus 316 ~~~~i~~~~~~~~~~~i~g~~---~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~~~~~~~Kvvi~~~ 391 (393)
T TIGR02819 316 GSLSIRFGLGWAKSHSFHTGQ---TPVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEFDAGAAKKFVIDPH 391 (393)
T ss_pred cccccchHHhhccCceEEecc---CChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHHhhCCceEEEEeCC
Confidence 11111 22555666532 11112347899999999998877777 7899999999999998887789999763
No 19
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=1.7e-51 Score=334.11 Aligned_cols=317 Identities=26% Similarity=0.295 Sum_probs=277.4
Q ss_pred ccchhcceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCC
Q 018529 6 GLILTCKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGV 83 (354)
Q Consensus 6 ~~~~~~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 83 (354)
..|+..|.+++++.|.+ +++++.|.|+|+|+|++||-.|||+|..|+.+..|.+...+.|++||.|.+|+|+.+|+++
T Consensus 4 ~~p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~gv 83 (336)
T KOG1197|consen 4 ASPPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEGV 83 (336)
T ss_pred CCCchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecCCc
Confidence 36889999999999887 8999999999999999999999999999999999988778889999999999999999999
Q ss_pred CCCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhh
Q 018529 84 SDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN 163 (354)
Q Consensus 84 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~ 163 (354)
+++++||||+.. ...|.|+|+..+|...++++|+.+++.+||++.+.++|||.-+++
T Consensus 84 tdrkvGDrVayl-----------------------~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e 140 (336)
T KOG1197|consen 84 TDRKVGDRVAYL-----------------------NPFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFE 140 (336)
T ss_pred cccccccEEEEe-----------------------ccchhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999855 245899999999999999999999999999999999999999999
Q ss_pred hcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-Ccc
Q 018529 164 VAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVD 241 (354)
Q Consensus 164 ~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~d 241 (354)
..++++|++||++.+ |++|+++.|+++..|+ .+|++.++.+|++.+++.|+++.|+++.+| +.+++++++++ |+|
T Consensus 141 ~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~h~I~y~~eD--~v~~V~kiTngKGVd 217 (336)
T KOG1197|consen 141 AYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAEHPIDYSTED--YVDEVKKITNGKGVD 217 (336)
T ss_pred hcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCcceeeccchh--HHHHHHhccCCCCce
Confidence 999999999999965 9999999999999999 899999999999999999999999999887 99999999988 999
Q ss_pred EEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhc-cccEEEE-EeccCCCCCCC----HHHHHHHHHc
Q 018529 242 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKG-TFFGNYKPRTD----LPSVVDMYMN 315 (354)
Q Consensus 242 vv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g-~~~~~~~~~~~----~~~~~~~~~~ 315 (354)
+++|.+|. +.+...+.+|++. |.+|.+|..++.. .+++...+. +.+++.. +.++....+.. ..+++.++.+
T Consensus 218 ~vyDsvG~-dt~~~sl~~Lk~~-G~mVSfG~asgl~-~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~alvns 294 (336)
T KOG1197|consen 218 AVYDSVGK-DTFAKSLAALKPM-GKMVSFGNASGLI-DPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARLFALVNS 294 (336)
T ss_pred eeeccccc-hhhHHHHHHhccC-ceEEEeccccCCC-CCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHHHHHhhc
Confidence 99999999 8999999999997 9999999876422 222222222 5565433 33333333323 3567788888
Q ss_pred cCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEecC
Q 018529 316 KQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME 353 (354)
Q Consensus 316 ~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~~ 353 (354)
+.+++. +.++|||+++.+|+.++++... +|+++...
T Consensus 295 g~lk~~--I~~~ypls~vadA~~diesrktvGkvlLlp~ 331 (336)
T KOG1197|consen 295 GHLKIH--IDHVYPLSKVADAHADIESRKTVGKVLLLPG 331 (336)
T ss_pred Ccccee--eeeecchHHHHHHHHHHHhhhccceEEEeCC
Confidence 977666 8999999999999999998775 78888754
No 20
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=1.5e-50 Score=369.72 Aligned_cols=332 Identities=21% Similarity=0.325 Sum_probs=272.5
Q ss_pred cccchhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCC
Q 018529 5 AGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVS 84 (354)
Q Consensus 5 ~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 84 (354)
+.-||++.++.+++.+..+++.+++.|+|+++||+|||.++|+|++|++.+.|..+...+|.++|||++|+|+++|++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~ 86 (360)
T PLN02586 7 EEHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVK 86 (360)
T ss_pred hhchhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEEECCCCC
Confidence 45789999999988877799999999999999999999999999999999877554445789999999999999999999
Q ss_pred CCCCCCEEEeccc-CCCCCCcccccCCCC-CCccc----------ccccccceeeEEeeccceEECCCCCCccchhhccc
Q 018529 85 DLEVGDHVLPVFT-GECGDCRHCRFSING-EPVNH----------FLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSC 152 (354)
Q Consensus 85 ~~~~Gd~V~~~~~-~~~~~c~~c~~~~~~-~~~~~----------~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~ 152 (354)
+|++||+|++.+. .+|+.|.+|+.+... |.... ....|+|+||+.+|++.++++|+++++++|+.+++
T Consensus 87 ~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~ 166 (360)
T PLN02586 87 KFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLC 166 (360)
T ss_pred ccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhhhhc
Confidence 9999999986544 579999999877543 22221 11258999999999999999999999999999999
Q ss_pred chhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhh-HHHHHhcCCceEEcCCCCChhHHHH
Q 018529 153 GVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR-FEEAKKFGVTDFVNTSEHDRPIQEV 231 (354)
Q Consensus 153 ~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~-~~~~~~lg~~~v~~~~~~~~~~~~~ 231 (354)
++.|+|+++.....+++|++|||.|+|++|++++|+|+.+|+ +|++++.++++ .+.++++|++.++++.+. +.
T Consensus 167 ~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~-----~~ 240 (360)
T PLN02586 167 AGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISSSSNKEDEAINRLGADSFLVSTDP-----EK 240 (360)
T ss_pred chHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcchhhhHHHhCCCcEEEcCCCH-----HH
Confidence 999999987666667899999999999999999999999999 67777666555 556788999988876542 23
Q ss_pred HHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHHH
Q 018529 232 IAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVV 310 (354)
Q Consensus 232 i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~ 310 (354)
+++.++ ++|+|||++|.+..+..++++++++ |+++.+|..... ..+.... +.+++.+.|++.+. .+++++++
T Consensus 241 ~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~vG~~~~~--~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~ 313 (360)
T PLN02586 241 MKAAIG-TMDYIIDTVSAVHALGPLLGLLKVN-GKLITLGLPEKP--LELPIFPLVLGRKLVGGSDIGG---IKETQEML 313 (360)
T ss_pred HHhhcC-CCCEEEECCCCHHHHHHHHHHhcCC-cEEEEeCCCCCC--CccCHHHHHhCCeEEEEcCcCC---HHHHHHHH
Confidence 444443 6999999999877889999999997 999999875422 2233332 34777787876432 24689999
Q ss_pred HHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529 311 DMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 352 (354)
Q Consensus 311 ~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~ 352 (354)
+++.+|++++. + ++|+|+|+++||+.+.+++. +|+||.+
T Consensus 314 ~li~~g~i~~~--~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 353 (360)
T PLN02586 314 DFCAKHNITAD--I-ELIRMDEINTAMERLAKSDVRYRFVIDV 353 (360)
T ss_pred HHHHhCCCCCc--E-EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 99999988753 3 68999999999999998875 6998876
No 21
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=3e-49 Score=360.56 Aligned_cols=335 Identities=23% Similarity=0.331 Sum_probs=275.9
Q ss_pred cceeeeccCCCceEEEEeecCCC-CCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018529 11 CKAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (354)
Q Consensus 11 ~~a~~~~~~~~~l~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~G 89 (354)
|||+++.+++. +++.+.|.|.| +++||+|||.++++|++|+........ ..+|.++|||++|+|+++|+++++|++|
T Consensus 1 Mka~~~~~~~~-~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~vG 78 (347)
T PRK10309 1 MKSVVNDTDGI-VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGA-HYYPITLGHEFSGYVEAVGSGVDDLHPG 78 (347)
T ss_pred CceEEEeCCCc-eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCCC-CCCCcccccceEEEEEEeCCCCCCCCCC
Confidence 79999998876 99999999997 589999999999999999875432111 2358899999999999999999999999
Q ss_pred CEEEecccCCCCCCcccccCCCC-CCccc---ccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhc
Q 018529 90 DHVLPVFTGECGDCRHCRFSING-EPVNH---FLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA 165 (354)
Q Consensus 90 d~V~~~~~~~~~~c~~c~~~~~~-~~~~~---~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~ 165 (354)
|+|++.+..+|++|++|..+... |.... ....|+|+||+.+|++.++++|+++++++|+.+. ++.++|++ .+..
T Consensus 79 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~~-~~~~ 156 (347)
T PRK10309 79 DAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLHA-FHLA 156 (347)
T ss_pred CEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHHH-HHhc
Confidence 99999999999999999866432 22222 2235899999999999999999999999998874 55667887 4667
Q ss_pred CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-Ccc-EE
Q 018529 166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVD-RS 243 (354)
Q Consensus 166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~d-vv 243 (354)
.+++|++|||+|+|++|++++|+|+.+|++.|+++++++++.++++++|+++++++.+.+ .+.+.+++.+ ++| ++
T Consensus 157 ~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~---~~~~~~~~~~~~~d~~v 233 (347)
T PRK10309 157 QGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSREMS---APQIQSVLRELRFDQLI 233 (347)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcccC---HHHHHHHhcCCCCCeEE
Confidence 889999999999999999999999999996689999999999999999999998876543 3456666665 888 99
Q ss_pred EEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecc-h-hhhccccEEEEEeccCCC--CCCCHHHHHHHHHccCCC
Q 018529 244 VECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-P-INVLNERTLKGTFFGNYK--PRTDLPSVVDMYMNKQLE 319 (354)
Q Consensus 244 ~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~-~-~~~~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~ 319 (354)
|||+|+...+..++++++++ |+++++|........... . ..+.+++++.|++.+... .+++++++++++.++++.
T Consensus 234 ~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~g~i~ 312 (347)
T PRK10309 234 LETAGVPQTVELAIEIAGPR-AQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLS 312 (347)
T ss_pred EECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHHHHHHcCCCC
Confidence 99999978999999999997 999999976532222211 1 224488999998764321 235789999999999998
Q ss_pred CCCceeeeeccccHHHHHHHHhcCCc-eeEEEecC
Q 018529 320 LEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME 353 (354)
Q Consensus 320 ~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~~ 353 (354)
+.++++++|+|+|+++|++.+.+++. +|+|+.++
T Consensus 313 ~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~ 347 (347)
T PRK10309 313 LEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQIP 347 (347)
T ss_pred chhheEEEeeHHHHHHHHHHHhcCCcceEEEEeCC
Confidence 88889999999999999999988775 69998763
No 22
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=5.4e-49 Score=359.80 Aligned_cols=327 Identities=26% Similarity=0.339 Sum_probs=258.1
Q ss_pred cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC---CCCCcccccceeEEEEEeCCCCCCCC
Q 018529 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT---PLFPRIFGHEAAGVVESVGEGVSDLE 87 (354)
Q Consensus 11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~---~~~p~~~G~e~~G~V~~vG~~~~~~~ 87 (354)
|||+++...+.++++.++|.|+|+++||||||.|+|+|++|++.+.|..+. ..+|.++|||++|+|+++|++ ++|+
T Consensus 1 mka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~ 79 (355)
T cd08230 1 MKAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLS 79 (355)
T ss_pred CceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCC
Confidence 689998765544999999999999999999999999999999999886432 235789999999999999999 9999
Q ss_pred CCCEEEecccCCCCCCcccccCCCCCCc-ccc------cccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhh
Q 018529 88 VGDHVLPVFTGECGDCRHCRFSINGEPV-NHF------LGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGA 160 (354)
Q Consensus 88 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~-~~~------~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~ 160 (354)
+||||++.+..+|++|.+|..+....+. ... ...|+|+||+.++++.++++|++++ +++.+.+++++++++
T Consensus 80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~--~~a~~~~p~~~~~~a 157 (355)
T cd08230 80 PGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA--DVGVLLEPLSVVEKA 157 (355)
T ss_pred CCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC--cceeecchHHHHHHH
Confidence 9999999999999999999765432221 111 1358999999999999999999998 344454566655544
Q ss_pred hhh------hcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcC---ChhhHHHHHhcCCceEEcCCCCChhHHHH
Q 018529 161 TLN------VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR---SSKRFEEAKKFGVTDFVNTSEHDRPIQEV 231 (354)
Q Consensus 161 l~~------~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~---~~~~~~~~~~lg~~~v~~~~~~~~~~~~~ 231 (354)
+.. ..++++|++|+|+|+|++|++++|+|+.+|+ +|+++++ +++|+++++++|++. +++.+.+ +.+
T Consensus 158 ~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~~~~--~~~- 232 (355)
T cd08230 158 IEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVEELGATY-VNSSKTP--VAE- 232 (355)
T ss_pred HHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEE-ecCCccc--hhh-
Confidence 321 2236789999999999999999999999999 7998887 688999999999986 4555433 333
Q ss_pred HHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecc-----hhhhccccEEEEEeccCCCCCCCH
Q 018529 232 IAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-----PINVLNERTLKGTFFGNYKPRTDL 306 (354)
Q Consensus 232 i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~-----~~~~~~~~~i~g~~~~~~~~~~~~ 306 (354)
.+ ..+++|+|||++|++..+..++++++++ |+++++|.........+. ...+.+++++.|++.. .++++
T Consensus 233 ~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~---~~~~~ 306 (355)
T cd08230 233 VK--LVGEFDLIIEATGVPPLAFEALPALAPN-GVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNA---NKRHF 306 (355)
T ss_pred hh--hcCCCCEEEECcCCHHHHHHHHHHccCC-cEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCC---chhhH
Confidence 21 1248999999999877899999999997 999999987642333333 1223489999998643 23678
Q ss_pred HHHHHHHHccCC----CCCCceeeeeccccHHHHHHHHhcCCceeEEEec
Q 018529 307 PSVVDMYMNKQL----ELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM 352 (354)
Q Consensus 307 ~~~~~~~~~~~~----~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~~ 352 (354)
.++++++.++.+ .+.+.++++|+|+|+.+||+.+.++. .|+||++
T Consensus 307 ~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~-~K~v~~~ 355 (355)
T cd08230 307 EQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE-IKVVIEW 355 (355)
T ss_pred HHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC-eEEEeeC
Confidence 999999988862 35667899999999999999886544 6998864
No 23
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=1e-48 Score=357.00 Aligned_cols=328 Identities=24% Similarity=0.396 Sum_probs=274.1
Q ss_pred eeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCC-CCCCCCcccccceeEEEEEeCCCCCCCCCCCEE
Q 018529 14 AVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG-QTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHV 92 (354)
Q Consensus 14 ~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~-~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V 92 (354)
+++++++++++++++|.|+|+++||+|||.++++|++|++.+.+.. +...+|.++|||++|+|+++|++++.+ +||+|
T Consensus 2 ~~~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV 80 (349)
T TIGR03201 2 WMMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAV 80 (349)
T ss_pred ceEecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEE
Confidence 4566777778999999999999999999999999999998874433 234568999999999999999999887 99999
Q ss_pred EecccCCCCCCcccccCCCC-CCccc---ccccccceeeEEeeccceEECCC------CCCccchhhcccchhhhhhhhh
Q 018529 93 LPVFTGECGDCRHCRFSING-EPVNH---FLGTSTFSEYTVVHSGCVAKINP------LAPLDKVCILSCGVSTGLGATL 162 (354)
Q Consensus 93 ~~~~~~~~~~c~~c~~~~~~-~~~~~---~~~~g~~a~~~~v~~~~~~~~P~------~~~~~~aa~l~~~~~~a~~~l~ 162 (354)
++.+..+|++|.+|..+... |.... ....|+|+||+.+|++.++++|+ ++++++++.+++++.++|+++
T Consensus 81 ~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a~- 159 (349)
T TIGR03201 81 IVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAA- 159 (349)
T ss_pred EECCCCCCCCChhhhCcCcccCCCCCccCcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHHH-
Confidence 99999999999999766432 22221 22358999999999999999999 899999999999999999986
Q ss_pred hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCC-hhHHHHHHHHcCC-Cc
Q 018529 163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD-RPIQEVIAEMTNG-GV 240 (354)
Q Consensus 163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~-~~~~~~i~~~~~~-~~ 240 (354)
....+++|++|+|+|+|++|++++|+|+.+|+ +|++++++++++++++++|++.++++.+.+ +++.+.+++++++ ++
T Consensus 160 ~~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~g~ 238 (349)
T TIGR03201 160 VQAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFAKARGL 238 (349)
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhcccCCC
Confidence 45789999999999999999999999999999 799999999999999999999988876643 3477788888877 88
Q ss_pred c----EEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhh-ccccEEEEEeccCCCCCCCHHHHHHHHHc
Q 018529 241 D----RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYKPRTDLPSVVDMYMN 315 (354)
Q Consensus 241 d----vv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~~~~ 315 (354)
| +||||+|+...+..++++++++ |+++++|....... +....+ .++.++.|++... .++++++++++.+
T Consensus 239 d~~~d~v~d~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~--~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~i~~ 312 (349)
T TIGR03201 239 RSTGWKIFECSGSKPGQESALSLLSHG-GTLVVVGYTMAKTE--YRLSNLMAFHARALGNWGCP---PDRYPAALDLVLD 312 (349)
T ss_pred CCCcCEEEECCCChHHHHHHHHHHhcC-CeEEEECcCCCCcc--cCHHHHhhcccEEEEEecCC---HHHHHHHHHHHHc
Confidence 6 8999999988888999999997 99999998653322 222233 3677888876432 3579999999999
Q ss_pred cCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEe
Q 018529 316 KQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 351 (354)
Q Consensus 316 ~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~ 351 (354)
+++++.++++ +|+|+|+++||+.+.+++. +|++++
T Consensus 313 g~i~~~~~i~-~~~l~~~~~A~~~~~~~~~~~k~~~~ 348 (349)
T TIGR03201 313 GKIQLGPFVE-RRPLDQIEHVFAAAHHHKLKRRAILT 348 (349)
T ss_pred CCCCcccceE-EecHHHHHHHHHHHHcCCccceEEec
Confidence 9998877664 7999999999999988875 587775
No 24
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=7.4e-49 Score=359.54 Aligned_cols=324 Identities=22% Similarity=0.336 Sum_probs=262.2
Q ss_pred eeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEE
Q 018529 13 AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHV 92 (354)
Q Consensus 13 a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V 92 (354)
++...+.++++++.+++.|+|+++||+|||.++|+|++|++.+.|......+|.++|||++|+|+++|+++++|++||+|
T Consensus 9 ~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV 88 (375)
T PLN02178 9 GWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRV 88 (375)
T ss_pred EEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccCCCCEE
Confidence 33344444458888999999999999999999999999999988755334568999999999999999999999999999
Q ss_pred EecccC-CCCCCcccccCCCC-CCccc----------ccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhh
Q 018529 93 LPVFTG-ECGDCRHCRFSING-EPVNH----------FLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGA 160 (354)
Q Consensus 93 ~~~~~~-~~~~c~~c~~~~~~-~~~~~----------~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~ 160 (354)
++.+.. .|+.|.+|+.+... |.... ....|+|+||+.+|++.++++|+++++++++.+++++.|+|++
T Consensus 89 ~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~a 168 (375)
T PLN02178 89 GVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSP 168 (375)
T ss_pred EEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccchHHHHH
Confidence 876655 69999999876533 22221 1125899999999999999999999999999999999999998
Q ss_pred hhhhcC-CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChh-hHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC
Q 018529 161 TLNVAK-PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK-RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG 238 (354)
Q Consensus 161 l~~~~~-~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~ 238 (354)
+..... .++|++|+|.|+|++|++++|+|+.+|+ +|++++++++ +.++++++|+++++++.+. +.+++.+.
T Consensus 169 l~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~-----~~v~~~~~- 241 (375)
T PLN02178 169 MKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDRLGADSFLVTTDS-----QKMKEAVG- 241 (375)
T ss_pred HHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHhCCCcEEEcCcCH-----HHHHHhhC-
Confidence 644332 3689999999999999999999999999 7888877654 4788899999998876542 24445443
Q ss_pred CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHHHHHHHccC
Q 018529 239 GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQ 317 (354)
Q Consensus 239 ~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~ 317 (354)
++|+|||++|.+..+..++++++++ |+++.+|..... ..+.... +.+++++.|++.+. .+++.++++++.+|+
T Consensus 242 ~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~vG~~~~~--~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~ 315 (375)
T PLN02178 242 TMDFIIDTVSAEHALLPLFSLLKVS-GKLVALGLPEKP--LDLPIFPLVLGRKMVGGSQIGG---MKETQEMLEFCAKHK 315 (375)
T ss_pred CCcEEEECCCcHHHHHHHHHhhcCC-CEEEEEccCCCC--CccCHHHHHhCCeEEEEeCccC---HHHHHHHHHHHHhCC
Confidence 6999999999877889999999997 999999975432 2233332 34888999887543 257899999999998
Q ss_pred CCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529 318 LELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 352 (354)
Q Consensus 318 ~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~ 352 (354)
+++. + ++|||+|+++||+.+.+++. +|+|+.+
T Consensus 316 i~~~--i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 348 (375)
T PLN02178 316 IVSD--I-ELIKMSDINSAMDRLAKSDVRYRFVIDV 348 (375)
T ss_pred Cccc--E-EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence 8754 4 67999999999999998876 6988876
No 25
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=3.3e-48 Score=356.14 Aligned_cols=343 Identities=48% Similarity=0.840 Sum_probs=287.8
Q ss_pred chhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 018529 8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLE 87 (354)
Q Consensus 8 ~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 87 (354)
..+|||.++..++++++++++|.|++.++||+|||.++++|++|++.+.|... ..+|.++|||++|+|+++|++++.++
T Consensus 5 ~~~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~ 83 (373)
T cd08299 5 VIKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-TPFPVILGHEAAGIVESVGEGVTTVK 83 (373)
T ss_pred cceeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC-CCCCccccccceEEEEEeCCCCccCC
Confidence 34689999999888899999999999999999999999999999999877542 34688999999999999999999999
Q ss_pred CCCEEEecccCCCCCCcccccCCCC-CCccc------------------------ccccccceeeEEeeccceEECCCCC
Q 018529 88 VGDHVLPVFTGECGDCRHCRFSING-EPVNH------------------------FLGTSTFSEYTVVHSGCVAKINPLA 142 (354)
Q Consensus 88 ~Gd~V~~~~~~~~~~c~~c~~~~~~-~~~~~------------------------~~~~g~~a~~~~v~~~~~~~~P~~~ 142 (354)
+||+|++.+..+|++|.+|..+... |.... +...|+|+||+.++++.++++|+++
T Consensus 84 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l 163 (373)
T cd08299 84 PGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAA 163 (373)
T ss_pred CCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCCCC
Confidence 9999999999999999999765432 22111 1135899999999999999999999
Q ss_pred CccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCC
Q 018529 143 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 222 (354)
Q Consensus 143 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~ 222 (354)
++++++.+++++.+||+++...+.+++|++|||+|+|++|++++++|+.+|+.+|+++++++++++.++++|++++++..
T Consensus 164 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~~ 243 (373)
T cd08299 164 PLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINPQ 243 (373)
T ss_pred ChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccc
Confidence 99999999999999999877888999999999999899999999999999986799999999999999999999998876
Q ss_pred CCChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHh-hCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCC
Q 018529 223 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECV-HDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK 301 (354)
Q Consensus 223 ~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l-~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 301 (354)
+.+.++.+.+.+++.+++|+++|++|++..+..++..+ +++ |+++.+|.........+....+.++.++.+++.+.+.
T Consensus 244 ~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 322 (373)
T cd08299 244 DYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGY-GVSVIVGVPPSSQNLSINPMLLLTGRTWKGAVFGGWK 322 (373)
T ss_pred ccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCC-CEEEEEccCCCCceeecCHHHHhcCCeEEEEEecCCc
Confidence 54434666677776668999999999767777767655 565 9999999764333344444334567889988876655
Q ss_pred CCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCceeEEEec
Q 018529 302 PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM 352 (354)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~~ 352 (354)
.++++.++++.+.++.+.+.+.+++.|+++++.+|++.+.+++..|+++++
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~~k~~~~~ 373 (373)
T cd08299 323 SKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKSIRTVLTF 373 (373)
T ss_pred cHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCcceEEEeC
Confidence 555677888888888777777788999999999999999888778888864
No 26
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=8.1e-48 Score=353.11 Aligned_cols=337 Identities=27% Similarity=0.446 Sum_probs=282.4
Q ss_pred ceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCC------
Q 018529 12 KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSD------ 85 (354)
Q Consensus 12 ~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~------ 85 (354)
||+++.++++.+++++++.|.|+++||+|||.++++|++|+....|..+...+|.++|||++|+|+++|+++++
T Consensus 2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~ 81 (361)
T cd08231 2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEP 81 (361)
T ss_pred eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccCCc
Confidence 78999998877999999999999999999999999999999988876543456889999999999999999986
Q ss_pred CCCCCEEEecccCCCCCCcccccCCCCCCccc-c----------cccccceeeEEeecc-ceEECCCCCCccchhhcccc
Q 018529 86 LEVGDHVLPVFTGECGDCRHCRFSINGEPVNH-F----------LGTSTFSEYTVVHSG-CVAKINPLAPLDKVCILSCG 153 (354)
Q Consensus 86 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~-~----------~~~g~~a~~~~v~~~-~~~~~P~~~~~~~aa~l~~~ 153 (354)
|++||+|++.+..+|++|..|..+....+... . ...|+|+||+.++++ .++++|+++++.+++.++++
T Consensus 82 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~~~~ 161 (361)
T cd08231 82 LKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPANCA 161 (361)
T ss_pred cCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHHHHhcCH
Confidence 99999999999999999999976643221110 1 124899999999996 79999999999999999899
Q ss_pred hhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCC-hhHHHHH
Q 018529 154 VSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD-RPIQEVI 232 (354)
Q Consensus 154 ~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~-~~~~~~i 232 (354)
++|||+++.+....+++++|||+|+|++|++++++|+.+|+++|+++++++++.++++++|++.++++.+.+ .++.+.+
T Consensus 162 ~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i 241 (361)
T cd08231 162 LATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDELPDPQRRAIV 241 (361)
T ss_pred HHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcCcccccHHHHHHH
Confidence 999999987666667999999999999999999999999997789999999999999999999988876543 2244567
Q ss_pred HHHcCC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHHH
Q 018529 233 AEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVV 310 (354)
Q Consensus 233 ~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~ 310 (354)
.+.+++ ++|++||++|+...+..++++++++ |+++.+|.........+.... +.+++++.+++... .+++++++
T Consensus 242 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 317 (361)
T cd08231 242 RDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYD---PSHLYRAV 317 (361)
T ss_pred HHHhCCCCCcEEEECCCChHHHHHHHHHhccC-CEEEEEcCCCCCCccccCHHHHhhcccEEEEcccCC---chhHHHHH
Confidence 788876 8999999998867889999999997 999999876432233333322 44888998876432 35789999
Q ss_pred HHHHcc--CCCCCCceeeeeccccHHHHHHHHhcCCceeEEEec
Q 018529 311 DMYMNK--QLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM 352 (354)
Q Consensus 311 ~~~~~~--~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~~ 352 (354)
+++.++ .+.+.+.++++|+++|+++||+.+.+++.+|+||++
T Consensus 318 ~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~k~vi~~ 361 (361)
T cd08231 318 RFLERTQDRFPFAELVTHRYPLEDINEALELAESGTALKVVIDP 361 (361)
T ss_pred HHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCceEEEeCC
Confidence 999988 666777788999999999999999888778999863
No 27
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=3.3e-48 Score=350.20 Aligned_cols=316 Identities=21% Similarity=0.285 Sum_probs=261.2
Q ss_pred eeeccCCC----ceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018529 14 AVAWEAGK----PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (354)
Q Consensus 14 ~~~~~~~~----~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~G 89 (354)
+.+.+++. .++++++|.|.|+++||+|||.++|+|++|++.+.|..+...+|.++|||++|+|+++|+++++|++|
T Consensus 2 ~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 81 (329)
T TIGR02822 2 WEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAVG 81 (329)
T ss_pred eeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCCC
Confidence 44555543 38899999999999999999999999999999998865444457899999999999999999999999
Q ss_pred CEEEeccc-CCCCCCcccccCCC-CCCcccc---cccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhh
Q 018529 90 DHVLPVFT-GECGDCRHCRFSIN-GEPVNHF---LGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV 164 (354)
Q Consensus 90 d~V~~~~~-~~~~~c~~c~~~~~-~~~~~~~---~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~ 164 (354)
|+|++.+. ..|+.|++|+.+.. .|..+.+ ...|+|+||+.+|++.++++|+++++++++.+++++.+||+++ ..
T Consensus 82 d~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~-~~ 160 (329)
T TIGR02822 82 DRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRAL-LR 160 (329)
T ss_pred CEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHH-Hh
Confidence 99987654 46999999976542 2332222 2358999999999999999999999999999999999999996 46
Q ss_pred cCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEE
Q 018529 165 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV 244 (354)
Q Consensus 165 ~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~ 244 (354)
+++++|++|||+|+|++|++++|+|+.+|+ +|++++++++|+++++++|+++++++.+.. .+++|+++
T Consensus 161 ~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~~-----------~~~~d~~i 228 (329)
T TIGR02822 161 ASLPPGGRLGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGGAYDTP-----------PEPLDAAI 228 (329)
T ss_pred cCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceeccccccC-----------cccceEEE
Confidence 889999999999999999999999999999 799999999999999999999988754321 12689999
Q ss_pred EcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCc
Q 018529 245 ECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKF 323 (354)
Q Consensus 245 d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (354)
++.+....+..++++++++ |+++.+|...... ..+.... +.+++++.+++.. .++++.++++++.++++.+
T Consensus 229 ~~~~~~~~~~~~~~~l~~~-G~~v~~G~~~~~~-~~~~~~~~~~~~~~i~g~~~~---~~~~~~~~~~l~~~g~i~~--- 300 (329)
T TIGR02822 229 LFAPAGGLVPPALEALDRG-GVLAVAGIHLTDT-PPLNYQRHLFYERQIRSVTSN---TRADAREFLELAAQHGVRV--- 300 (329)
T ss_pred ECCCcHHHHHHHHHhhCCC-cEEEEEeccCccC-CCCCHHHHhhCCcEEEEeecC---CHHHHHHHHHHHHhCCCee---
Confidence 9988878999999999997 9999999753221 1233322 3478889887643 2346888999999998753
Q ss_pred eeeeeccccHHHHHHHHhcCCc-eeEEE
Q 018529 324 ITHRIPFSEINKAFEYMVKGEG-LRCII 350 (354)
Q Consensus 324 v~~~~~l~~~~~a~~~~~~~~~-~k~vi 350 (354)
++++|+|+|+++|++.+.+++. +|+||
T Consensus 301 i~~~~~l~~~~~A~~~~~~~~~~Gkvvl 328 (329)
T TIGR02822 301 TTHTYPLSEADRALRDLKAGRFDGAAVL 328 (329)
T ss_pred EEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence 5789999999999999988876 58776
No 28
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=7.1e-48 Score=352.04 Aligned_cols=329 Identities=22% Similarity=0.326 Sum_probs=270.6
Q ss_pred hcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018529 10 TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (354)
Q Consensus 10 ~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~G 89 (354)
.++|++.++++.++++++++.|+|+++||+|||.++++|++|++.+.|......+|.++|||++|+|+++|+++++|++|
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~~v~~~~~G 88 (357)
T PLN02514 9 KTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTVG 88 (357)
T ss_pred eEEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECCCcccccCC
Confidence 37999999999999999999999999999999999999999999887755444568899999999999999999999999
Q ss_pred CEEEecccC-CCCCCcccccCCCCCCccc-----------ccccccceeeEEeeccceEECCCCCCccchhhcccchhhh
Q 018529 90 DHVLPVFTG-ECGDCRHCRFSINGEPVNH-----------FLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 157 (354)
Q Consensus 90 d~V~~~~~~-~~~~c~~c~~~~~~~~~~~-----------~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a 157 (354)
|+|++.+.. .|++|++|+.+....+... ....|+|+||+.+|.+.++++|+++++++|+.+++++.+|
T Consensus 89 d~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta 168 (357)
T PLN02514 89 DIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGVTV 168 (357)
T ss_pred CEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhhhhhHHHH
Confidence 999865543 6999999987654332221 1235899999999999999999999999999999999999
Q ss_pred hhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHH-HHhcCCceEEcCCCCChhHHHHHHHHc
Q 018529 158 LGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMT 236 (354)
Q Consensus 158 ~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~-~~~lg~~~v~~~~~~~~~~~~~i~~~~ 236 (354)
|+++......++|++|+|+|+|++|++++|+|+.+|+ +|+++++++++.+. ++++|++.+++..+. +.+.+.+
T Consensus 169 ~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~-~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~-----~~~~~~~ 242 (357)
T PLN02514 169 YSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSDKKREEALEHLGADDYLVSSDA-----AEMQEAA 242 (357)
T ss_pred HHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhcCCcEEecCCCh-----HHHHHhc
Confidence 9997666667899999999999999999999999999 77777777766654 467999887765432 2344444
Q ss_pred CCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchh-hhccccEEEEEeccCCCCCCCHHHHHHHHHc
Q 018529 237 NGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYKPRTDLPSVVDMYMN 315 (354)
Q Consensus 237 ~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~ 315 (354)
. ++|++||++|....+..++++++++ |+++.+|..... ..+... .+.+++++.|++.... .++.++++++.+
T Consensus 243 ~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~~~~~ 315 (357)
T PLN02514 243 D-SLDYIIDTVPVFHPLEPYLSLLKLD-GKLILMGVINTP--LQFVTPMLMLGRKVITGSFIGSM---KETEEMLEFCKE 315 (357)
T ss_pred C-CCcEEEECCCchHHHHHHHHHhccC-CEEEEECCCCCC--CcccHHHHhhCCcEEEEEecCCH---HHHHHHHHHHHh
Confidence 3 6999999999877899999999997 999999976432 223322 2448899999875432 468999999999
Q ss_pred cCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEecCC
Q 018529 316 KQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISMED 354 (354)
Q Consensus 316 ~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~~d 354 (354)
++++ +.+ ++|+|+|+.+||+.+.+++. +|+||.+++
T Consensus 316 g~l~--~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~~~ 352 (357)
T PLN02514 316 KGLT--SMI-EVVKMDYVNTAFERLEKNDVRYRFVVDVAG 352 (357)
T ss_pred CCCc--CcE-EEEcHHHHHHHHHHHHcCCCceeEEEEccc
Confidence 9754 445 68999999999999998886 699998753
No 29
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=1.4e-47 Score=350.15 Aligned_cols=330 Identities=30% Similarity=0.494 Sum_probs=278.9
Q ss_pred cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCC-----------CCCCCcccccceeEEEEEe
Q 018529 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-----------TPLFPRIFGHEAAGVVESV 79 (354)
Q Consensus 11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~-----------~~~~p~~~G~e~~G~V~~v 79 (354)
|||+++.++++ +++++++.|+|.++||+||+.++++|++|+....+... ...+|.++|||++|+|+++
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v 79 (351)
T cd08233 1 MKAARYHGRKD-IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEV 79 (351)
T ss_pred CceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEe
Confidence 78999988776 99999999999999999999999999999876653211 1236889999999999999
Q ss_pred CCCCCCCCCCCEEEecccCCCCCCcccccCCCC-CCccccc----ccccceeeEEeeccceEECCCCCCccchhhcccch
Q 018529 80 GEGVSDLEVGDHVLPVFTGECGDCRHCRFSING-EPVNHFL----GTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 154 (354)
Q Consensus 80 G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~-~~~~~~~----~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~ 154 (354)
|+++++|++||+|++.+..+|++|.+|+.+... +...++. ..|+|++|+.++.+.++++|+++++++++.+ .++
T Consensus 80 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~-~~~ 158 (351)
T cd08233 80 GSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALV-EPL 158 (351)
T ss_pred CCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhc-cHH
Confidence 999999999999999999999999999765432 2222221 2589999999999999999999999998876 578
Q ss_pred hhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHH
Q 018529 155 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAE 234 (354)
Q Consensus 155 ~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~ 234 (354)
.+||+++ ...++++|++|||+|+|.+|.+++|+|+.+|+++|+++++++++.++++++|++.++++.+.+ +.+.+++
T Consensus 159 ~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~--~~~~l~~ 235 (351)
T cd08233 159 AVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTEVD--VVAEVRK 235 (351)
T ss_pred HHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCccC--HHHHHHH
Confidence 8999996 778899999999999999999999999999997889999999999999999999999887765 8888888
Q ss_pred HcCC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHHHHH
Q 018529 235 MTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDM 312 (354)
Q Consensus 235 ~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~ 312 (354)
++++ ++|++||++|....+..++++++++ |+++.+|..... ..+.... +.+++++.+++... .+++++++++
T Consensus 236 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~ 309 (351)
T cd08233 236 LTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWEKP--ISFNPNDLVLKEKTLTGSICYT---REDFEEVIDL 309 (351)
T ss_pred HhCCCCCCEEEECCCCHHHHHHHHHhccCC-CEEEEEccCCCC--CccCHHHHHhhCcEEEEEeccC---cchHHHHHHH
Confidence 8877 7999999999877899999999997 999999976522 2333332 34889999876432 3679999999
Q ss_pred HHccCCCCCCceeeeeccccH-HHHHHHHhcCCc--eeEEEe
Q 018529 313 YMNKQLELEKFITHRIPFSEI-NKAFEYMVKGEG--LRCIIS 351 (354)
Q Consensus 313 ~~~~~~~~~~~v~~~~~l~~~-~~a~~~~~~~~~--~k~vi~ 351 (354)
+.++++++.+.++++|+++|+ ++|++.+.+++. +|+||.
T Consensus 310 ~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~~ 351 (351)
T cd08233 310 LASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILVS 351 (351)
T ss_pred HHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEeC
Confidence 999999877778899999996 799999988774 688763
No 30
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=1e-46 Score=345.82 Aligned_cols=337 Identities=37% Similarity=0.648 Sum_probs=282.4
Q ss_pred hhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 018529 9 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV 88 (354)
Q Consensus 9 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 88 (354)
|+|||+++.+++.++++++.+.|+++++||+|||.++++|++|+....+..+ ..+|.++|||++|+|+++|+++.++++
T Consensus 1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~ 79 (365)
T cd08278 1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-TPLPAVLGHEGAGVVEAVGSAVTGLKP 79 (365)
T ss_pred CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCC
Confidence 6899999999777799999999999999999999999999999999877554 346889999999999999999999999
Q ss_pred CCEEEecccCCCCCCcccccCCCCCCcc---------------------------cccccccceeeEEeeccceEECCCC
Q 018529 89 GDHVLPVFTGECGDCRHCRFSINGEPVN---------------------------HFLGTSTFSEYTVVHSGCVAKINPL 141 (354)
Q Consensus 89 Gd~V~~~~~~~~~~c~~c~~~~~~~~~~---------------------------~~~~~g~~a~~~~v~~~~~~~~P~~ 141 (354)
||+|++.+. .|+.|.+|..+..+.+.. .....|+|++|+.++++.++++|++
T Consensus 80 Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~~ 158 (365)
T cd08278 80 GDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKD 158 (365)
T ss_pred CCEEEEccc-CCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECCCC
Confidence 999998764 899999997654321110 0223589999999999999999999
Q ss_pred CCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcC
Q 018529 142 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 221 (354)
Q Consensus 142 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~ 221 (354)
+++++++.+++++.+||.++...+.++++++|||+|+|++|++++|+|+.+|++.|+++++++++.+.++++|++.++++
T Consensus 159 ~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~~ 238 (365)
T cd08278 159 VPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINP 238 (365)
T ss_pred CCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEecC
Confidence 99999999999999999998788899999999999889999999999999999779999999999999999999999887
Q ss_pred CCCChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhh-ccccEEEEEeccCC
Q 018529 222 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNY 300 (354)
Q Consensus 222 ~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~ 300 (354)
.+.+ +.+.+.+++++++|+++||+|+...+..++++++++ |+++.+|.........+....+ .+++++.++.....
T Consensus 239 ~~~~--~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (365)
T cd08278 239 KEED--LVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGDS 315 (365)
T ss_pred CCcC--HHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccC-CEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCCc
Confidence 6654 777788877449999999999778899999999997 9999998753222233444444 57888888765433
Q ss_pred CCCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCceeEEEe
Q 018529 301 KPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS 351 (354)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~ 351 (354)
...+.++++++++.++++.+.+. .+.|+++++.+|++.+.+++..|++|+
T Consensus 316 ~~~~~~~~~~~~l~~g~l~~~~~-~~~~~l~~~~~a~~~~~~~~~~k~~~~ 365 (365)
T cd08278 316 VPQEFIPRLIELYRQGKFPFDKL-VTFYPFEDINQAIADSESGKVIKPVLR 365 (365)
T ss_pred ChHHHHHHHHHHHHcCCCChHHh-eEEecHHHHHHHHHHHHCCCceEEEEC
Confidence 33345788999999998754333 358999999999999998887898874
No 31
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=5.2e-47 Score=352.29 Aligned_cols=331 Identities=18% Similarity=0.217 Sum_probs=264.6
Q ss_pred hhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhh-ccCCCC------CCCCcccccceeEEEEEeCC
Q 018529 9 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFW-ESKGQT------PLFPRIFGHEAAGVVESVGE 81 (354)
Q Consensus 9 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~-~~~~~~------~~~p~~~G~e~~G~V~~vG~ 81 (354)
|+|||++++++++ ++++++|.|+|+++||+|||.++|+|++|++.+ .|.... ..+|.++|||++|+|+++|+
T Consensus 1 m~~~a~~~~~~~~-l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~ 79 (410)
T cd08238 1 MKTKAWRMYGKGD-LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK 79 (410)
T ss_pred CCcEEEEEEcCCc-eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence 6899999999886 999999999999999999999999999999976 343211 23688999999999999999
Q ss_pred CCC-CCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeecc----ceEECCCCCCccchhhc-ccch-
Q 018529 82 GVS-DLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSG----CVAKINPLAPLDKVCIL-SCGV- 154 (354)
Q Consensus 82 ~~~-~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~----~~~~~P~~~~~~~aa~l-~~~~- 154 (354)
+++ +|++||||++.+...|++|..|.. .+....|+|+||+.++++ .++++|+++++++|+.+ +.+.
T Consensus 80 ~v~~~~~vGdrV~~~~~~~c~~~~~c~~-------~g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~epl~~~ 152 (410)
T cd08238 80 KWQGKYKPGQRFVIQPALILPDGPSCPG-------YSYTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPLSCV 152 (410)
T ss_pred CccCCCCCCCEEEEcCCcCCCCCCCCCC-------ccccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcchHHHH
Confidence 998 599999999999999999988831 122346999999999987 68999999999998865 2111
Q ss_pred hhhhhhh--------hhhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcC--CcEEEEEcCChhhHHHHHhc--------CC
Q 018529 155 STGLGAT--------LNVAKPERGSSVAVFGL-GAVGLAAAEGARIAG--ASRIIGVDRSSKRFEEAKKF--------GV 215 (354)
Q Consensus 155 ~~a~~~l--------~~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g--~~~vi~v~~~~~~~~~~~~l--------g~ 215 (354)
.+++.++ .+.+++++|++|+|+|+ |++|++++|+|+.+| +.+|++++++++|+++++++ |+
T Consensus 153 ~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga 232 (410)
T cd08238 153 IGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGI 232 (410)
T ss_pred HHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCc
Confidence 1233332 24578899999999985 999999999999975 45799999999999999997 66
Q ss_pred c-eEEcCCCCChhHHHHHHHHcCC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCC-CCCceeecchhh-hccccE
Q 018529 216 T-DFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP-SKDAVFMTKPIN-VLNERT 291 (354)
Q Consensus 216 ~-~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~-~~~~~~~~~~~~-~~~~~~ 291 (354)
+ .++++.+. .++.+.+++++++ ++|++||++|++..+..++++++++ |+++.++.. .......+.... +.++++
T Consensus 233 ~~~~i~~~~~-~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~-G~~v~~~g~~~~~~~~~~~~~~~~~~~~~ 310 (410)
T cd08238 233 ELLYVNPATI-DDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPD-GCLNFFAGPVDKNFSAPLNFYNVHYNNTH 310 (410)
T ss_pred eEEEECCCcc-ccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccC-CeEEEEEccCCCCccccccHHHhhhcCcE
Confidence 6 45665442 2377788888877 8999999999888999999999997 877766432 211112333333 348899
Q ss_pred EEEEeccCCCCCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCceeEEEec
Q 018529 292 LKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM 352 (354)
Q Consensus 292 i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~~ 352 (354)
+.|++... +++++++++++.+|++++.++++++|+|+|+++|++.+..+..+|+||.+
T Consensus 311 i~g~~~~~---~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~gKvvl~~ 368 (410)
T cd08238 311 YVGTSGGN---TDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLPGIPGGKKLIYT 368 (410)
T ss_pred EEEeCCCC---HHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhhccCCceEEEEC
Confidence 99976432 35789999999999999988999999999999999999844457988876
No 32
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=2.2e-46 Score=343.57 Aligned_cols=339 Identities=49% Similarity=0.864 Sum_probs=287.5
Q ss_pred cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018529 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90 (354)
Q Consensus 11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd 90 (354)
+||+++.+.+.++++++.+.|.++++||+|++.++++|++|++...+... ..+|.++|||++|+|+++|++++.+++||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~-~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd 79 (365)
T cd05279 1 CKAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP-TPLPVILGHEGAGIVESIGPGVTTLKPGD 79 (365)
T ss_pred CceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCCCC
Confidence 47899998887799999999999999999999999999999998877543 34578999999999999999999999999
Q ss_pred EEEecccCCCCCCcccccCCCCCC-c------------------------ccccccccceeeEEeeccceEECCCCCCcc
Q 018529 91 HVLPVFTGECGDCRHCRFSINGEP-V------------------------NHFLGTSTFSEYTVVHSGCVAKINPLAPLD 145 (354)
Q Consensus 91 ~V~~~~~~~~~~c~~c~~~~~~~~-~------------------------~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~ 145 (354)
+|++.+...|++|.+|+.+....+ . +++.+.|+|++|+.++++.++++|++++++
T Consensus 80 ~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~~ 159 (365)
T cd05279 80 KVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLE 159 (365)
T ss_pred EEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCCCCHH
Confidence 999999999999999975442211 0 112235799999999999999999999999
Q ss_pred chhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCC
Q 018529 146 KVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD 225 (354)
Q Consensus 146 ~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~ 225 (354)
+++.+.+++.+||+++.+.+++++|++|||+|+|++|++++++|+.+|+..|+++++++++.++++++|++.+++..+.+
T Consensus 160 ~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~ 239 (365)
T cd05279 160 KVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQD 239 (365)
T ss_pred HhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeeccccccc
Confidence 99999999999999988888999999999998899999999999999996688888899999999999999888877653
Q ss_pred hhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhh-CCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCCC
Q 018529 226 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH-DGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRT 304 (354)
Q Consensus 226 ~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~-~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~ 304 (354)
.++.+.+.+++++++|++||++|....+..++++++ ++ |+++.+|.........+....+.++.++.|++...+...+
T Consensus 240 ~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 318 (365)
T cd05279 240 KPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGG-GTSVVVGVPPSGTEATLDPNDLLTGRTIKGTVFGGWKSKD 318 (365)
T ss_pred chHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCC-CEEEEEecCCCCCceeeCHHHHhcCCeEEEEeccCCchHh
Confidence 247777887775699999999987788999999999 87 9999998754222334444434577788888776666667
Q ss_pred CHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCceeEEEe
Q 018529 305 DLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS 351 (354)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~ 351 (354)
.+..+++++.++.+.+.+.+.++++++++.+||+.+.+++..|++++
T Consensus 319 ~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~~~ 365 (365)
T cd05279 319 SVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESIRTILT 365 (365)
T ss_pred HHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence 89999999999988876678899999999999999988877888774
No 33
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=3.3e-47 Score=345.55 Aligned_cols=320 Identities=17% Similarity=0.200 Sum_probs=248.1
Q ss_pred hhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC----CCCCcccccceeEEEEEeCCCCC
Q 018529 9 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT----PLFPRIFGHEAAGVVESVGEGVS 84 (354)
Q Consensus 9 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~----~~~p~~~G~e~~G~V~~vG~~~~ 84 (354)
|..++++++++++ ++++++|.|+ +++||+|||.++|||++|++++.|.... ..+|.++|||++|+|+++|.+
T Consensus 1 ~~~~~~~~~~~~~-~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~-- 76 (341)
T cd08237 1 MINQVYRLVRPKF-FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG-- 76 (341)
T ss_pred CcccceEEeccce-EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--
Confidence 4568999999987 9999999995 9999999999999999999999886432 357999999999999998875
Q ss_pred CCCCCCEEEecccCCCCCCccccc-CCCCCCc-ccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhh
Q 018529 85 DLEVGDHVLPVFTGECGDCRHCRF-SINGEPV-NHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL 162 (354)
Q Consensus 85 ~~~~Gd~V~~~~~~~~~~c~~c~~-~~~~~~~-~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~ 162 (354)
+|++||||++.+..+|+ |..|.. .++.+.. .+....|+|+||+.+|++.++++|+++++++|+.+ .+++++|+++.
T Consensus 77 ~~~vGdrV~~~~~~~~~-~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~~-~~~~~a~~a~~ 154 (341)
T cd08237 77 TYKVGTKVVMVPNTPVE-KDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAAFT-ELVSVGVHAIS 154 (341)
T ss_pred ccCCCCEEEECCCCCch-hcccchhccCCCcceeEecCCCceEEEEEEchHHeEECCCCCChHHhhhh-chHHHHHHHHH
Confidence 79999999999888887 445532 2222111 11123589999999999999999999999887755 48888999864
Q ss_pred h--hcCCCCCCeEEEEcCChhHHHHHHHHHH-cCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-
Q 018529 163 N--VAKPERGSSVAVFGLGAVGLAAAEGARI-AGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG- 238 (354)
Q Consensus 163 ~--~~~~~~~~~vlI~G~g~~G~~a~~~a~~-~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~- 238 (354)
. ...+++|++|||+|+|++|++++|+|+. .|..+|++++++++|++++++++.+..++ + + ..+
T Consensus 155 ~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~--~----~-------~~~~ 221 (341)
T cd08237 155 RFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLID--D----I-------PEDL 221 (341)
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehh--h----h-------hhcc
Confidence 3 3457899999999999999999999996 66558999999999999998876643221 0 1 112
Q ss_pred CccEEEEcccC---hHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHHHHHHH
Q 018529 239 GVDRSVECTGN---IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYM 314 (354)
Q Consensus 239 ~~dvv~d~~g~---~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~ 314 (354)
++|+|||++|+ +..+..++++++++ |+++++|..... ..+.... +.+++++.|+.... .++++++++++.
T Consensus 222 g~d~viD~~G~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~k~~~i~g~~~~~---~~~~~~~~~~~~ 295 (341)
T cd08237 222 AVDHAFECVGGRGSQSAINQIIDYIRPQ-GTIGLMGVSEYP--VPINTRMVLEKGLTLVGSSRST---REDFERAVELLS 295 (341)
T ss_pred CCcEEEECCCCCccHHHHHHHHHhCcCC-cEEEEEeecCCC--cccCHHHHhhCceEEEEecccC---HHHHHHHHHHHH
Confidence 69999999994 46789999999997 999999975422 2333332 45899999976432 256899999999
Q ss_pred cc---CCCCCCceeeeeccc---cHHHHHHHHhcCCceeEEEecC
Q 018529 315 NK---QLELEKFITHRIPFS---EINKAFEYMVKGEGLRCIISME 353 (354)
Q Consensus 315 ~~---~~~~~~~v~~~~~l~---~~~~a~~~~~~~~~~k~vi~~~ 353 (354)
++ +..+.++++++|+|+ ++.++|+...++..+|+||.++
T Consensus 296 ~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~~~gKvvi~~~ 340 (341)
T cd08237 296 RNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTNSWGKTVMEWE 340 (341)
T ss_pred hCCcccCChHHHhccccccccHHHHHHHHHHHhhcCcceEEEEee
Confidence 98 346778899999986 5566665555544579998764
No 34
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.3e-45 Score=337.25 Aligned_cols=335 Identities=25% Similarity=0.344 Sum_probs=277.7
Q ss_pred cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018529 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90 (354)
Q Consensus 11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd 90 (354)
|||+++.+++. +++.+.+.|.+.++||+|||.++++|++|++...+.......|.++|||++|+|+++|++++++++||
T Consensus 1 mka~~~~~~~~-~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd 79 (351)
T cd08285 1 MKAFAMLGIGK-VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKPGD 79 (351)
T ss_pred CceEEEccCCc-cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCCCC
Confidence 79999999886 88999999989999999999999999999988777554445688999999999999999999999999
Q ss_pred EEEecccCCCCCCcccccCCCCCCcc-------cccccccceeeEEeecc--ceEECCCCCCccchhhcccchhhhhhhh
Q 018529 91 HVLPVFTGECGDCRHCRFSINGEPVN-------HFLGTSTFSEYTVVHSG--CVAKINPLAPLDKVCILSCGVSTGLGAT 161 (354)
Q Consensus 91 ~V~~~~~~~~~~c~~c~~~~~~~~~~-------~~~~~g~~a~~~~v~~~--~~~~~P~~~~~~~aa~l~~~~~~a~~~l 161 (354)
+|++.+..+|++|..|..+....+.. .....|+|+||+.++.+ .++++|+++++++++.+++.+.+||++
T Consensus 80 ~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~~- 158 (351)
T cd08285 80 RVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGFHG- 158 (351)
T ss_pred EEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhHHHH-
Confidence 99998888999999997665322111 11235899999999974 899999999999999999999999998
Q ss_pred hhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-Cc
Q 018529 162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GV 240 (354)
Q Consensus 162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~ 240 (354)
...+.++++++|||+|+|++|++++|+|+.+|+..|+++++++++.++++++|++.++++.+.+ +.+.+.+++.+ ++
T Consensus 159 ~~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~--~~~~i~~~~~~~~~ 236 (351)
T cd08285 159 AELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKNGD--VVEQILKLTGGKGV 236 (351)
T ss_pred HHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCCCC--HHHHHHHHhCCCCC
Confidence 4778999999999998899999999999999997799999999999999999999999887655 77778777766 89
Q ss_pred cEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh---hccccEEEEEeccCCCCCCCHHHHHHHHHccC
Q 018529 241 DRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN---VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQ 317 (354)
Q Consensus 241 dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~---~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~ 317 (354)
|++||++|++..+..++++++++ |+++.+|.........+.... ..+..++.+.+.. ...++++++++++.+|+
T Consensus 237 d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~g~ 313 (351)
T cd08285 237 DAVIIAGGGQDTFEQALKVLKPG-GTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCP--GGRLRMERLASLIEYGR 313 (351)
T ss_pred cEEEECCCCHHHHHHHHHHhhcC-CEEEEecccCCCceeecChhhhhhhccccEEEEeecC--CccccHHHHHHHHHcCC
Confidence 99999999878899999999997 999999876532222332111 1345566654321 12367999999999999
Q ss_pred CCCCC-ceeeeeccccHHHHHHHHhcCCc--eeEEEec
Q 018529 318 LELEK-FITHRIPFSEINKAFEYMVKGEG--LRCIISM 352 (354)
Q Consensus 318 ~~~~~-~v~~~~~l~~~~~a~~~~~~~~~--~k~vi~~ 352 (354)
+++.. .+.+.|+++++++|++.+.+++. .|++|.+
T Consensus 314 i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 314 VDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred CChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 88743 34456999999999999988763 6998864
No 35
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=6.1e-45 Score=334.01 Aligned_cols=336 Identities=40% Similarity=0.693 Sum_probs=285.0
Q ss_pred cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018529 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90 (354)
Q Consensus 11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd 90 (354)
|||+++.+++.++++.+++.|+++++||+|++.++++|+.|+..+.+..+ ..+|.++|+|++|+|+++|++++.|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd 79 (363)
T cd08279 1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP-APLPAVLGHEGAGVVEEVGPGVTGVKPGD 79 (363)
T ss_pred CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC-CCCCccccccceEEEEEeCCCccccCCCC
Confidence 79999999987899999999999999999999999999999998877554 34577899999999999999999999999
Q ss_pred EEEecccCCCCCCcccccCCCCCCccc------------------------ccccccceeeEEeeccceEECCCCCCccc
Q 018529 91 HVLPVFTGECGDCRHCRFSINGEPVNH------------------------FLGTSTFSEYTVVHSGCVAKINPLAPLDK 146 (354)
Q Consensus 91 ~V~~~~~~~~~~c~~c~~~~~~~~~~~------------------------~~~~g~~a~~~~v~~~~~~~~P~~~~~~~ 146 (354)
+|++.+..+|++|.+|+.+..+.+... ....|+|++|+.++++.++++|+++++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~ 159 (363)
T cd08279 80 HVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDR 159 (363)
T ss_pred EEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCChHH
Confidence 999999999999999987665443221 13458999999999999999999999999
Q ss_pred hhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCCh
Q 018529 147 VCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 226 (354)
Q Consensus 147 aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~ 226 (354)
++.+++++.+||.++....+++++++|||+|+|++|++++++|+..|+.+|+++++++++.++++++|++++++....+
T Consensus 160 aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~~~- 238 (363)
T cd08279 160 AALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASEDD- 238 (363)
T ss_pred eehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCCcc-
Confidence 9999999999999988888999999999998899999999999999995599999999999999999998888876654
Q ss_pred hHHHHHHHHcCC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhc-cccEEEEEeccCCCCCC
Q 018529 227 PIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKPRT 304 (354)
Q Consensus 227 ~~~~~i~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~~~ 304 (354)
+..++.+++.+ ++|++||++++...+..++++++++ |+++.++.........+....+. ++..+.++.++.....+
T Consensus 239 -~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (363)
T cd08279 239 -AVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSANPRR 316 (363)
T ss_pred -HHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcC-CeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcCcHH
Confidence 77778887755 8999999999767889999999997 99999986542222333333333 67777777654434446
Q ss_pred CHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCceeEEE
Q 018529 305 DLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII 350 (354)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi 350 (354)
.++++++++.++++.+.+.+.++|+++++++|++.+.+++..|.||
T Consensus 317 ~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 317 DIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred HHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 7889999999998877655778999999999999999888777665
No 36
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=1.1e-45 Score=330.79 Aligned_cols=303 Identities=20% Similarity=0.270 Sum_probs=240.7
Q ss_pred hcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecC-ccchhhhccCCCC---CCCCcccccceeEEEEEeCCCCCC
Q 018529 10 TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLC-RTDLYFWESKGQT---PLFPRIFGHEAAGVVESVGEGVSD 85 (354)
Q Consensus 10 ~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~-~~D~~~~~~~~~~---~~~p~~~G~e~~G~V~~vG~~~~~ 85 (354)
+|||+++.+++. +++.+.+.|+|+++||+|||.++||| ++|++.+.|..+. ..+|.++|||++|+|+++|+++ +
T Consensus 1 ~~ka~~~~~~~~-l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~ 78 (308)
T TIGR01202 1 KTQAIVLSGPNQ-IELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-G 78 (308)
T ss_pred CceEEEEeCCCe-EEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-C
Confidence 578999988776 99999999999999999999999996 7999988776533 2569999999999999999998 6
Q ss_pred CCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhc
Q 018529 86 LEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA 165 (354)
Q Consensus 86 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~ 165 (354)
|++||||+.. |..|..|.. ...|+|+||+.+|++.++++|+.++++. +.+. ..++||+++.+ .
T Consensus 79 ~~vGdrV~~~----~~~c~~~~~----------~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~-~~~~a~~~~~~-~ 141 (308)
T TIGR01202 79 FRPGDRVFVP----GSNCYEDVR----------GLFGGASKRLVTPASRVCRLDPALGPQG-ALLA-LAATARHAVAG-A 141 (308)
T ss_pred CCCCCEEEEe----Ccccccccc----------ccCCcccceEEcCHHHceeCCCCCCHHH-Hhhh-HHHHHHHHHHh-c
Confidence 9999999873 233444321 1248999999999999999999998754 4444 57899998644 3
Q ss_pred CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEE
Q 018529 166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE 245 (354)
Q Consensus 166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d 245 (354)
..++++++|+|+|++|++++|+|+++|++.|++++.+++|++.+.++ .++++.+. ..+++|+|||
T Consensus 142 -~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i~~~~~-----------~~~g~Dvvid 206 (308)
T TIGR01202 142 -EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVLDPEKD-----------PRRDYRAIYD 206 (308)
T ss_pred -ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---cccChhhc-----------cCCCCCEEEE
Confidence 34689999999999999999999999996677888888777766543 33443211 1237999999
Q ss_pred cccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCcee
Q 018529 246 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFIT 325 (354)
Q Consensus 246 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 325 (354)
|+|++..++.++++++++ |+++++|.......+++.. .+.+++++.++.... +++++++++++.++++++.++++
T Consensus 207 ~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~-~~~~~~~i~~~~~~~---~~~~~~~~~l~~~g~i~~~~~it 281 (308)
T TIGR01202 207 ASGDPSLIDTLVRRLAKG-GEIVLAGFYTEPVNFDFVP-AFMKEARLRIAAEWQ---PGDLHAVRELIESGALSLDGLIT 281 (308)
T ss_pred CCCCHHHHHHHHHhhhcC-cEEEEEeecCCCcccccch-hhhcceEEEEecccc---hhHHHHHHHHHHcCCCChhhccc
Confidence 999977889999999997 9999999764322222222 244788888865432 35799999999999999988899
Q ss_pred eeeccccHHHHHHHHhcCC-ceeEEEe
Q 018529 326 HRIPFSEINKAFEYMVKGE-GLRCIIS 351 (354)
Q Consensus 326 ~~~~l~~~~~a~~~~~~~~-~~k~vi~ 351 (354)
++|||+|+++||+.+.+++ .+|++|+
T Consensus 282 ~~~~l~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 282 HQRPASDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred eeecHHHHHHHHHHHhcCcCceEEEeC
Confidence 9999999999999876654 4788874
No 37
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=3.4e-44 Score=326.51 Aligned_cols=330 Identities=22% Similarity=0.349 Sum_probs=271.3
Q ss_pred cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018529 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90 (354)
Q Consensus 11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd 90 (354)
|||+++.+++. +++.+++.|+|+++|++||+.++++|++|+..+.+..+..++|.++|||++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 79 (339)
T PRK10083 1 MKSIVIEKPNS-LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGE 79 (339)
T ss_pred CeEEEEecCCe-eEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCCCC
Confidence 68999988875 99999999999999999999999999999998877655455689999999999999999999999999
Q ss_pred EEEecccCCCCCCcccccCCCC-CCcc---cccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcC
Q 018529 91 HVLPVFTGECGDCRHCRFSING-EPVN---HFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 166 (354)
Q Consensus 91 ~V~~~~~~~~~~c~~c~~~~~~-~~~~---~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~ 166 (354)
+|++.+..+|+.|.+|+.+... |... .....|+|+||+.++.+.++++|+++++++++ +..++.++|.+ ....+
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~~-~~~~~ 157 (339)
T PRK10083 80 RVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAANV-TGRTG 157 (339)
T ss_pred EEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHHH-HHhcC
Confidence 9999999999999999765432 2111 12225899999999999999999999998876 55678888864 67789
Q ss_pred CCCCCeEEEEcCChhHHHHHHHHHH-cCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEE
Q 018529 167 PERGSSVAVFGLGAVGLAAAEGARI-AGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSV 244 (354)
Q Consensus 167 ~~~~~~vlI~G~g~~G~~a~~~a~~-~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~ 244 (354)
+++|++|+|+|+|++|++++|+|+. +|+..++++++++++.++++++|++.++++.+.+ +.+.+... + ++|++|
T Consensus 158 ~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~--~~~~~~~~--g~~~d~vi 233 (339)
T PRK10083 158 PTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQEP--LGEALEEK--GIKPTLII 233 (339)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcccc--HHHHHhcC--CCCCCEEE
Confidence 9999999999999999999999996 6997788899999999999999999999877644 65555432 3 578999
Q ss_pred EcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCc
Q 018529 245 ECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKF 323 (354)
Q Consensus 245 d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (354)
|++|++..+..++++++++ |+++.+|...... .+.... ..+++++.+... ..+.++++++++.++++.+...
T Consensus 234 d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~l~~~~~ 306 (339)
T PRK10083 234 DAACHPSILEEAVTLASPA-ARIVLMGFSSEPS--EIVQQGITGKELSIFSSRL----NANKFPVVIDWLSKGLIDPEKL 306 (339)
T ss_pred ECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCc--eecHHHHhhcceEEEEEec----ChhhHHHHHHHHHcCCCChHHh
Confidence 9999877899999999997 9999998764322 222222 236777776543 2357899999999998887655
Q ss_pred eeeeeccccHHHHHHHHhcCC--ceeEEEecCC
Q 018529 324 ITHRIPFSEINKAFEYMVKGE--GLRCIISMED 354 (354)
Q Consensus 324 v~~~~~l~~~~~a~~~~~~~~--~~k~vi~~~d 354 (354)
+.+.|+++++++|++.+.+++ .+|+++++.+
T Consensus 307 ~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~~ 339 (339)
T PRK10083 307 ITHTFDFQHVADAIELFEKDQRHCCKVLLTFAE 339 (339)
T ss_pred eeeeecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 789999999999999987643 3799998754
No 38
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=2.4e-44 Score=326.44 Aligned_cols=326 Identities=25% Similarity=0.434 Sum_probs=272.0
Q ss_pred cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018529 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90 (354)
Q Consensus 11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd 90 (354)
|||+++.+++.++++++.+.|+++++||+||+.++++|++|+..+.|..+...+|.++|||++|+|+++|++++++++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd 80 (333)
T cd08296 1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGD 80 (333)
T ss_pred CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCCCC
Confidence 79999999966699999999999999999999999999999998877554445688999999999999999999999999
Q ss_pred EEEecc-cCCCCCCcccccCCCC-CCccc---ccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhc
Q 018529 91 HVLPVF-TGECGDCRHCRFSING-EPVNH---FLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA 165 (354)
Q Consensus 91 ~V~~~~-~~~~~~c~~c~~~~~~-~~~~~---~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~ 165 (354)
+|++.+ ...|++|.+|..+... |.... ....|+|++|+.++++.++++|+++++.+++.+++++.+||+++. ..
T Consensus 81 ~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~-~~ 159 (333)
T cd08296 81 RVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNALR-NS 159 (333)
T ss_pred EEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHHH-hc
Confidence 998744 5679999999766543 22221 222589999999999999999999999999999999999999874 45
Q ss_pred CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEE
Q 018529 166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE 245 (354)
Q Consensus 166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d 245 (354)
.++++++|||+|+|++|++++++|+.+|+ +|+++++++++.++++++|+++++++.+.+ +.+.+++. +++|+++|
T Consensus 160 ~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~--~~~~~~~~--~~~d~vi~ 234 (333)
T cd08296 160 GAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTSKED--VAEALQEL--GGAKLILA 234 (333)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCCCcc--HHHHHHhc--CCCCEEEE
Confidence 89999999999999999999999999999 799999999999999999999998877654 66666665 37999999
Q ss_pred cccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCce
Q 018529 246 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFI 324 (354)
Q Consensus 246 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 324 (354)
+.|....+..++++++++ |+++.+|.... ..++.... +.+++++.++..+. ..++..+++++..+++.. .+
T Consensus 235 ~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~l~~--~v 306 (333)
T cd08296 235 TAPNAKAISALVGGLAPR-GKLLILGAAGE--PVAVSPLQLIMGRKSIHGWPSGT---ALDSEDTLKFSALHGVRP--MV 306 (333)
T ss_pred CCCchHHHHHHHHHcccC-CEEEEEecCCC--CCCcCHHHHhhcccEEEEeCcCC---HHHHHHHHHHHHhCCCCc--eE
Confidence 998668899999999997 99999987652 22333332 34899999876432 246888888888876543 34
Q ss_pred eeeeccccHHHHHHHHhcCCc-eeEEEe
Q 018529 325 THRIPFSEINKAFEYMVKGEG-LRCIIS 351 (354)
Q Consensus 325 ~~~~~l~~~~~a~~~~~~~~~-~k~vi~ 351 (354)
+.|+++|+.+|++.+.+++. +|+|++
T Consensus 307 -~~~~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 307 -ETFPLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred -EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence 68999999999999998886 688774
No 39
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=2.6e-44 Score=331.95 Aligned_cols=333 Identities=29% Similarity=0.430 Sum_probs=276.7
Q ss_pred cceeeeccCCCceEEEEeecCCC-CCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018529 11 CKAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (354)
Q Consensus 11 ~~a~~~~~~~~~l~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~G 89 (354)
|||+++.+++. +++.+++.|.| ++++|+||+.++++|++|+..+.|..+..++|.++|||++|+|+++|++++++++|
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 79 (386)
T cd08283 1 MKALVWHGKGD-VRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVG 79 (386)
T ss_pred CeeEEEecCCC-ceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Confidence 78999988765 99999999988 49999999999999999999998876555668899999999999999999999999
Q ss_pred CEEEecccCCCCCCcccccCCCCCCccc----------------cc--------ccccceeeEEeecc--ceEECCCCCC
Q 018529 90 DHVLPVFTGECGDCRHCRFSINGEPVNH----------------FL--------GTSTFSEYTVVHSG--CVAKINPLAP 143 (354)
Q Consensus 90 d~V~~~~~~~~~~c~~c~~~~~~~~~~~----------------~~--------~~g~~a~~~~v~~~--~~~~~P~~~~ 143 (354)
|+|++.+..+|++|++|..+....+... .. ..|+|++|+.++++ .++++|++++
T Consensus 80 d~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~ 159 (386)
T cd08283 80 DRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPDDLS 159 (386)
T ss_pred CEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEECCCCCC
Confidence 9999999999999999976653322111 11 24899999999988 8999999999
Q ss_pred ccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCC
Q 018529 144 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 223 (354)
Q Consensus 144 ~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~ 223 (354)
+++|+++++.+++||+++ ...+++++++|||+|+|++|.+++++|+..|..+|+++++++++.+++++++...++++.+
T Consensus 160 ~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~vi~~~~ 238 (386)
T cd08283 160 DEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETINFEE 238 (386)
T ss_pred HHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEEcCCc
Confidence 999999999999999997 7889999999999988999999999999999856999999999999999984446676655
Q ss_pred CChhHHHHHHHHcCC-CccEEEEcccC---------------------hHhHHHHHHHhhCCCceEEEEcCCCCCceeec
Q 018529 224 HDRPIQEVIAEMTNG-GVDRSVECTGN---------------------IDNMISAFECVHDGWGVAVLVGVPSKDAVFMT 281 (354)
Q Consensus 224 ~~~~~~~~i~~~~~~-~~dvv~d~~g~---------------------~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~ 281 (354)
.+ ++.+.+.+++++ ++|++||++|+ ...++.++++++++ |+++.+|..... ...+
T Consensus 239 ~~-~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~g~~~~~-~~~~ 315 (386)
T cd08283 239 VD-DVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKG-GTVSIIGVYGGT-VNKF 315 (386)
T ss_pred ch-HHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccC-CEEEEEcCCCCC-cCcc
Confidence 32 377778888877 89999999975 24678899999997 999999876432 2223
Q ss_pred ch-hhhccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCC-c-eeEEEe
Q 018529 282 KP-INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE-G-LRCIIS 351 (354)
Q Consensus 282 ~~-~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~-~-~k~vi~ 351 (354)
.. ..+.+++++.+... ...+.++++++++.++++.+.+++.+.|+++++.+|++.+.+++ . +|+||+
T Consensus 316 ~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~ 385 (386)
T cd08283 316 PIGAAMNKGLTLRMGQT---HVQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLK 385 (386)
T ss_pred CHHHHHhCCcEEEeccC---CchHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEec
Confidence 33 22447888887642 22356889999999998887666778999999999999998876 3 688885
No 40
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=6.8e-44 Score=325.75 Aligned_cols=330 Identities=25% Similarity=0.388 Sum_probs=273.0
Q ss_pred cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC---------CCCCcccccceeEEEEEeCC
Q 018529 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT---------PLFPRIFGHEAAGVVESVGE 81 (354)
Q Consensus 11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~---------~~~p~~~G~e~~G~V~~vG~ 81 (354)
|||++++++++ +++++.+.|++.+++|+||+.++++|++|+..+.|.... ..+|.++|||++|+|+++|+
T Consensus 1 mka~~~~~~~~-~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~ 79 (350)
T cd08256 1 MRAVVCHGPQD-YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGE 79 (350)
T ss_pred CeeEEEecCCc-eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCC
Confidence 78999998876 999999999999999999999999999999988764311 14577899999999999999
Q ss_pred CCC--CCCCCCEEEecccCCCCCCcccccCCCC-CCcc---cc--cccccceeeEEeecc-ceEECCCCCCccchhhccc
Q 018529 82 GVS--DLEVGDHVLPVFTGECGDCRHCRFSING-EPVN---HF--LGTSTFSEYTVVHSG-CVAKINPLAPLDKVCILSC 152 (354)
Q Consensus 82 ~~~--~~~~Gd~V~~~~~~~~~~c~~c~~~~~~-~~~~---~~--~~~g~~a~~~~v~~~-~~~~~P~~~~~~~aa~l~~ 152 (354)
+++ +|++||+|++.+..+|++|++|..+... |... +. ...|+|++|+.++++ .++++|+++++++++.+ .
T Consensus 80 ~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~ 158 (350)
T cd08256 80 GAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAILI-E 158 (350)
T ss_pred CcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHhhh-h
Confidence 999 8999999999999999999999766432 2111 11 135899999999988 67899999999999988 7
Q ss_pred chhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHH
Q 018529 153 GVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVI 232 (354)
Q Consensus 153 ~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i 232 (354)
+++++|+++ +.++++++++|+|.|+|.+|++++++|+++|+..++++++++++.++++++|++.+++..+.+ +.+.+
T Consensus 159 ~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~--~~~~~ 235 (350)
T cd08256 159 PLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPPEVD--VVEKI 235 (350)
T ss_pred HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEecCCCcC--HHHHH
Confidence 999999986 778999999999977899999999999999987788999999999999999998888876554 77788
Q ss_pred HHHcCC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCCCCHHHHHH
Q 018529 233 AEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVD 311 (354)
Q Consensus 233 ~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~ 311 (354)
.+++++ ++|++||++|+...+..++++++++ |+++.+|.........+......+++++.++.... ..+.++++
T Consensus 236 ~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~ 310 (350)
T cd08256 236 KELTGGYGCDIYIEATGHPSAVEQGLNMIRKL-GRFVEFSVFGDPVTVDWSIIGDRKELDVLGSHLGP----YCYPIAID 310 (350)
T ss_pred HHHhCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEccCCCCCccChhHhhcccccEEEEeccCc----hhHHHHHH
Confidence 888777 8999999999767888999999997 99999986543222222222124677787766433 36888999
Q ss_pred HHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEE
Q 018529 312 MYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCII 350 (354)
Q Consensus 312 ~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi 350 (354)
++.++.+.+.+.+.+.|+++++.+|++.+.+++. +|+|+
T Consensus 311 ~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 311 LIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred HHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 9999988775556899999999999999988775 57664
No 41
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=5.8e-44 Score=326.07 Aligned_cols=333 Identities=32% Similarity=0.434 Sum_probs=277.2
Q ss_pred cceeeeccCCCceEEEEeecCCC-CCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018529 11 CKAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (354)
Q Consensus 11 ~~a~~~~~~~~~l~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~G 89 (354)
|||+++.+++. +++.+.|.|.| .++||+||+.++++|++|+....+..+...+|.++|+|++|+|+++|++++++++|
T Consensus 1 ~ka~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (347)
T cd05278 1 MKALVYLGPGK-IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPG 79 (347)
T ss_pred CceEEEecCCc-eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccCCC
Confidence 68999988876 89999999999 89999999999999999999888766556668999999999999999999999999
Q ss_pred CEEEecccCCCCCCcccccCCCC-CCc------ccccccccceeeEEeecc--ceEECCCCCCccchhhcccchhhhhhh
Q 018529 90 DHVLPVFTGECGDCRHCRFSING-EPV------NHFLGTSTFSEYTVVHSG--CVAKINPLAPLDKVCILSCGVSTGLGA 160 (354)
Q Consensus 90 d~V~~~~~~~~~~c~~c~~~~~~-~~~------~~~~~~g~~a~~~~v~~~--~~~~~P~~~~~~~aa~l~~~~~~a~~~ 160 (354)
|+|++.+..+|+.|.+|..+... ++. .+....|+|++|++++++ .++++|+++++++++.+++++.+||++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~ 159 (347)
T cd05278 80 DRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGFHG 159 (347)
T ss_pred CEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhheeeh
Confidence 99999999999999999765432 111 111345899999999998 999999999999999999999999999
Q ss_pred hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-C
Q 018529 161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-G 239 (354)
Q Consensus 161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~ 239 (354)
+ ...+++++++|||.|+|.+|++++|+|+.+|..+|+++++++++.++++++|++.++++.+.+ +.+.+++++++ +
T Consensus 160 ~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~--~~~~i~~~~~~~~ 236 (347)
T cd05278 160 A-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKNGD--IVEQILELTGGRG 236 (347)
T ss_pred h-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCcch--HHHHHHHHcCCCC
Confidence 6 778899999999988899999999999999965788888899999999999999998887654 77788887775 8
Q ss_pred ccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCCCCHHHHHHHHHccCCC
Q 018529 240 VDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE 319 (354)
Q Consensus 240 ~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (354)
+|++||++|+...+..++++|+++ |+++.+|..............+.+++++.++.... .+.++++++++.++.+.
T Consensus 237 ~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~ 312 (347)
T cd05278 237 VDCVIEAVGFEETFEQAVKVVRPG-GTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPV---RARMPELLDLIEEGKID 312 (347)
T ss_pred CcEEEEccCCHHHHHHHHHHhhcC-CEEEEEcCCCCCcccCccchhhhceeEEEeeccCc---hhHHHHHHHHHHcCCCC
Confidence 999999998867889999999997 99999986542211112222234677777654322 35788999999999887
Q ss_pred CCCceeeeeccccHHHHHHHHhcCCc--eeEEEe
Q 018529 320 LEKFITHRIPFSEINKAFEYMVKGEG--LRCIIS 351 (354)
Q Consensus 320 ~~~~v~~~~~l~~~~~a~~~~~~~~~--~k~vi~ 351 (354)
+.+.+...|+++++++|++.+..++. .|+|++
T Consensus 313 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~ 346 (347)
T cd05278 313 PSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIR 346 (347)
T ss_pred hhHcEEEEecHHHHHHHHHHHhcCCCCceEEEec
Confidence 65556788999999999999887765 578775
No 42
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=5.7e-44 Score=322.88 Aligned_cols=309 Identities=19% Similarity=0.261 Sum_probs=253.4
Q ss_pred cceeeeccCCC-----ceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCC
Q 018529 11 CKAAVAWEAGK-----PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVS 84 (354)
Q Consensus 11 ~~a~~~~~~~~-----~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~ 84 (354)
|||+++.+++. .+++.+.|.|.|+++||+||+.++++|++|+....|..+. ..+|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 80 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL 80 (324)
T ss_pred CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence 78999998875 3788899999999999999999999999999988775543 35688999999999999999999
Q ss_pred C-CCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhh
Q 018529 85 D-LEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN 163 (354)
Q Consensus 85 ~-~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~ 163 (354)
+ |++||+|++.+. ..|+|+||+.+|++.++++|+++++++++++++.+.|||.. ..
T Consensus 81 ~~~~vGd~V~~~~~----------------------~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~-~~ 137 (324)
T cd08291 81 AQSLIGKRVAFLAG----------------------SYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGM-LE 137 (324)
T ss_pred ccCCCCCEEEecCC----------------------CCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHH-HH
Confidence 6 999999986521 13899999999999999999999999999888889999754 45
Q ss_pred hcCCCCCCeEEEE-c-CChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-Cc
Q 018529 164 VAKPERGSSVAVF-G-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GV 240 (354)
Q Consensus 164 ~~~~~~~~~vlI~-G-~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~ 240 (354)
.... +++.++|+ | +|++|++++|+|+.+|+ +|+++++++++.++++++|+++++++.+.+ +.+.+++++.+ ++
T Consensus 138 ~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~--~~~~v~~~~~~~~~ 213 (324)
T cd08291 138 TARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGAEYVLNSSDPD--FLEDLKELIAKLNA 213 (324)
T ss_pred hhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEECCCcc--HHHHHHHHhCCCCC
Confidence 5555 56667665 4 59999999999999999 899999999999999999999999887655 88888888876 89
Q ss_pred cEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchh-hhccccEEEEEeccCCCC---CCCHHHHHHHHHcc
Q 018529 241 DRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYKP---RTDLPSVVDMYMNK 316 (354)
Q Consensus 241 dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~---~~~~~~~~~~~~~~ 316 (354)
|++||++|+ ......+++++++ |+++.+|.........+... .+.+++++.+++...+.. .++++++++++. +
T Consensus 214 d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 290 (324)
T cd08291 214 TIFFDAVGG-GLTGQILLAMPYG-STLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-T 290 (324)
T ss_pred cEEEECCCc-HHHHHHHHhhCCC-CEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-C
Confidence 999999998 5667789999997 99999986543221112222 245889999988655432 235777888877 6
Q ss_pred CCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEe
Q 018529 317 QLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 351 (354)
Q Consensus 317 ~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~ 351 (354)
. +.+.++++|+|+|+.+||+.+.+++. +|++|.
T Consensus 291 ~--~~~~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~~ 324 (324)
T cd08291 291 E--LKTTFASRYPLALTLEAIAFYSKNMSTGKKLLI 324 (324)
T ss_pred c--cccceeeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence 4 45568899999999999999988765 788763
No 43
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=2e-43 Score=324.61 Aligned_cols=335 Identities=33% Similarity=0.501 Sum_probs=279.3
Q ss_pred cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCC---CC
Q 018529 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSD---LE 87 (354)
Q Consensus 11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~---~~ 87 (354)
|||+++.+++.++++.+.++|.++++||+|++.++++|++|+....+..+. .+|.++|||++|+|+.+|+++++ |+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~-~~p~~~g~e~~G~v~~vG~~~~~~~~~~ 79 (367)
T cd08263 1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF-PPPFVLGHEISGEVVEVGPNVENPYGLS 79 (367)
T ss_pred CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC-CCCcccccccceEEEEeCCCCCCCCcCC
Confidence 789999988777999999999999999999999999999999988775543 56789999999999999999988 99
Q ss_pred CCCEEEecccCCCCCCcccccCCCCCCccc--------------------------ccccccceeeEEeeccceEECCCC
Q 018529 88 VGDHVLPVFTGECGDCRHCRFSINGEPVNH--------------------------FLGTSTFSEYTVVHSGCVAKINPL 141 (354)
Q Consensus 88 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~--------------------------~~~~g~~a~~~~v~~~~~~~~P~~ 141 (354)
+||+|++.+..+|+.|.+|..+....+... ....|+|++|+.++++.++++|++
T Consensus 80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~ 159 (367)
T cd08263 80 VGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPLPES 159 (367)
T ss_pred CCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEECCCC
Confidence 999999999999999999964432211110 023589999999999999999999
Q ss_pred CCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcC
Q 018529 142 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 221 (354)
Q Consensus 142 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~ 221 (354)
+++.+++.+++++++||+++.+...+.++++|||+|+|++|++++++|+.+|+++|+++++++++.+.++++|++.+++.
T Consensus 160 is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~~~ 239 (367)
T cd08263 160 LDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVNA 239 (367)
T ss_pred CCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEecC
Confidence 99999999999999999998777888999999999889999999999999999559999899999999999999999888
Q ss_pred CCCChhHHHHHHHHcCC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhh-ccccEEEEEeccC
Q 018529 222 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGN 299 (354)
Q Consensus 222 ~~~~~~~~~~i~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~ 299 (354)
.+.+ +.+++++...+ ++|++||++++......++++++++ |+++.++.........+....+ .+++++.++...
T Consensus 240 ~~~~--~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 315 (367)
T cd08263 240 AKED--AVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYGA- 315 (367)
T ss_pred Cccc--HHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcC-CEEEEEccCCCCCccccCHHHHhhCCeEEEecCCC-
Confidence 7654 77778877765 8999999999854889999999997 9999998654322223333334 477787774321
Q ss_pred CCCCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEe
Q 018529 300 YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 351 (354)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~ 351 (354)
..++.++.+++++.++++.+...+++.++++++.++++.+.+++. +|+|+.
T Consensus 316 -~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 316 -RPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred -CcHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence 223468889999999988776567789999999999999988875 588763
No 44
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=2.7e-43 Score=321.33 Aligned_cols=332 Identities=31% Similarity=0.420 Sum_probs=277.4
Q ss_pred cceeeeccCCCceEEEEeecCCC-CCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018529 11 CKAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (354)
Q Consensus 11 ~~a~~~~~~~~~l~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~G 89 (354)
|||+++.+++. +++.+.+.|+| .++||+||+.++++|+.|+..+.|..+...+|.++|||++|+|+++|++++++++|
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~G 79 (345)
T cd08286 1 MKALVYHGPGK-ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVG 79 (345)
T ss_pred CceEEEecCCc-eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccCCC
Confidence 68999988886 99999999986 89999999999999999999988765545558899999999999999999999999
Q ss_pred CEEEecccCCCCCCcccccCCCCCCc-----ccccccccceeeEEeecc--ceEECCCCCCccchhhcccchhhhhhhhh
Q 018529 90 DHVLPVFTGECGDCRHCRFSINGEPV-----NHFLGTSTFSEYTVVHSG--CVAKINPLAPLDKVCILSCGVSTGLGATL 162 (354)
Q Consensus 90 d~V~~~~~~~~~~c~~c~~~~~~~~~-----~~~~~~g~~a~~~~v~~~--~~~~~P~~~~~~~aa~l~~~~~~a~~~l~ 162 (354)
|+|++.+..+|++|++|..+...... .+....|+|++|+.++++ .++++|++++..+++.+++++++||+++.
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~ 159 (345)
T cd08286 80 DRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYECGV 159 (345)
T ss_pred CEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHHHHHHHH
Confidence 99999999999999999754322111 112234899999999988 89999999999999999999999999777
Q ss_pred hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-Ccc
Q 018529 163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVD 241 (354)
Q Consensus 163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~d 241 (354)
...++.++++|||.|+|++|.+++|+|+.+|..+|+++++++++.++++++|++.++++.+.+ +.+.+.+++.+ ++|
T Consensus 160 ~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~--~~~~i~~~~~~~~~d 237 (345)
T cd08286 160 LNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAKGD--AIEQVLELTDGRGVD 237 (345)
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceecccccc--HHHHHHHHhCCCCCC
Confidence 788899999999998899999999999999943888899999999999999999999887654 77777777766 899
Q ss_pred EEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHHHHHHHccCCCC
Q 018529 242 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLEL 320 (354)
Q Consensus 242 vv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (354)
++||++|....+..++++++++ |+++.+|..... ..+.... +.+++++.+.... .+.+..+++++.++.+.+
T Consensus 238 ~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~ 310 (345)
T cd08286 238 VVIEAVGIPATFELCQELVAPG-GHIANVGVHGKP--VDLHLEKLWIKNITITTGLVD----TNTTPMLLKLVSSGKLDP 310 (345)
T ss_pred EEEECCCCHHHHHHHHHhccCC-cEEEEecccCCC--CCcCHHHHhhcCcEEEeecCc----hhhHHHHHHHHHcCCCCh
Confidence 9999999877889999999998 999999865322 2333333 4478888775432 135788999999998877
Q ss_pred CCceeeeeccccHHHHHHHHhcCC---ceeEEEec
Q 018529 321 EKFITHRIPFSEINKAFEYMVKGE---GLRCIISM 352 (354)
Q Consensus 321 ~~~v~~~~~l~~~~~a~~~~~~~~---~~k~vi~~ 352 (354)
.+++.+.|++++++++++.+.+.. ..|+||++
T Consensus 311 ~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 311 SKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred HHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 666789999999999999988752 35988864
No 45
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=5.6e-43 Score=318.66 Aligned_cols=328 Identities=28% Similarity=0.407 Sum_probs=274.8
Q ss_pred cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCC---CCCCCcccccceeEEEEEeCCCCCCCC
Q 018529 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESVGEGVSDLE 87 (354)
Q Consensus 11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~---~~~~p~~~G~e~~G~V~~vG~~~~~~~ 87 (354)
|||+++.+++.++++.+.+.|++++++++||+.++++|++|+....+..+ ...+|.++|+|++|+|+++|+++.+|+
T Consensus 1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~ 80 (340)
T cd05284 1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLK 80 (340)
T ss_pred CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCc
Confidence 68999998877799999999999999999999999999999998877543 245678999999999999999999999
Q ss_pred CCCEEEecccCCCCCCcccccCCC-CCCc---ccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhh
Q 018529 88 VGDHVLPVFTGECGDCRHCRFSIN-GEPV---NHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN 163 (354)
Q Consensus 88 ~Gd~V~~~~~~~~~~c~~c~~~~~-~~~~---~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~ 163 (354)
+||+|++.+..+|+.|.+|..+.. .+.. .+....|+|++|+.++++.++++|+++++++++.+++.+.+||+++..
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l~~ 160 (340)
T cd05284 81 EGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVKK 160 (340)
T ss_pred CCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHHHHH
Confidence 999999999999999999975543 2211 222335899999999999999999999999999999999999999766
Q ss_pred h-cCCCCCCeEEEEcCChhHHHHHHHHHHcC-CcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-Cc
Q 018529 164 V-AKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GV 240 (354)
Q Consensus 164 ~-~~~~~~~~vlI~G~g~~G~~a~~~a~~~g-~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~ 240 (354)
. ..+.++++|||+|+|.+|++++++|+.+| . +|+++++++++.+.++++|+++++++++. +.+++++++++ ++
T Consensus 161 ~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~i~~~~~~~~~ 236 (340)
T cd05284 161 ALPYLDPGSTVVVIGVGGLGHIAVQILRALTPA-TVIAVDRSEEALKLAERLGADHVLNASDD---VVEEVRELTGGRGA 236 (340)
T ss_pred hcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHhCCcEEEcCCcc---HHHHHHHHhCCCCC
Confidence 5 46889999999999889999999999999 6 88889899999999999999888887653 67778888776 89
Q ss_pred cEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHHHHHHHccCCC
Q 018529 241 DRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE 319 (354)
Q Consensus 241 dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (354)
|+++|++|+...+..++++++++ |+++.+|.... ....... +.+++++.++... .++.+.++++++.++.+.
T Consensus 237 dvvld~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~---~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~g~l~ 309 (340)
T cd05284 237 DAVIDFVGSDETLALAAKLLAKG-GRYVIVGYGGH---GRLPTSDLVPTEISVIGSLWG---TRAELVEVVALAESGKVK 309 (340)
T ss_pred CEEEEcCCCHHHHHHHHHHhhcC-CEEEEEcCCCC---CccCHHHhhhcceEEEEEecc---cHHHHHHHHHHHHhCCCC
Confidence 99999999877899999999997 99999986542 1222222 3478888876532 235688899999999776
Q ss_pred CCCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529 320 LEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 352 (354)
Q Consensus 320 ~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~ 352 (354)
+ ..+.|+++++++|++.+.+++. +|+|+.+
T Consensus 310 ~---~~~~~~~~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 310 V---EITKFPLEDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred c---ceEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence 4 3467999999999999988775 5877753
No 46
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=5.3e-43 Score=319.97 Aligned_cols=332 Identities=27% Similarity=0.398 Sum_probs=275.2
Q ss_pred cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCC------------CCCCCcccccceeEEEEE
Q 018529 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ------------TPLFPRIFGHEAAGVVES 78 (354)
Q Consensus 11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~------------~~~~p~~~G~e~~G~V~~ 78 (354)
|||+++..++.++++.+.|.|++.++||+||+.++++|++|+..+.+..+ ...+|.++|||++|+|++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~ 80 (350)
T cd08240 1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA 80 (350)
T ss_pred CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence 79999998888899999999999999999999999999999998876432 123467899999999999
Q ss_pred eCCCCCCCCCCCEEEecccCCCCCCcccccCCCCCC-cc---cccccccceeeEEeeccceEECCCCCCccchhhcccch
Q 018529 79 VGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEP-VN---HFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 154 (354)
Q Consensus 79 vG~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~-~~---~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~ 154 (354)
+|++++++++||+|++.+...|++|..|..+....+ .. +....|+|++|+.++.+.++++|+++++.+++.+.+.+
T Consensus 81 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~~~ 160 (350)
T cd08240 81 VGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLACSG 160 (350)
T ss_pred eCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeCCCCCCHHHeehhhchh
Confidence 999999999999999999999999999965432211 11 11245899999999999999999999999999999999
Q ss_pred hhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHH
Q 018529 155 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAE 234 (354)
Q Consensus 155 ~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~ 234 (354)
.+||+++.....++++++|||+|+|++|++++|+|+.+|+++|+++++++++.+.++++|++.+++..+.+ +.+.+.+
T Consensus 161 ~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~ 238 (350)
T cd08240 161 LTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGSDPD--AAKRIIK 238 (350)
T ss_pred hhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecCCCcc--HHHHHHH
Confidence 99999977666677899999998899999999999999997788998999999999999998888776544 6666777
Q ss_pred HcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCCCCHHHHHHHHH
Q 018529 235 MTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYM 314 (354)
Q Consensus 235 ~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~ 314 (354)
+..+++|++||++|....+..++++|+++ |+++.+|............. ..++.++.++..... +++.++++++.
T Consensus 239 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~~~~~~---~~~~~~~~ll~ 313 (350)
T cd08240 239 AAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFGGEATLPLPLL-PLRALTIQGSYVGSL---EELRELVALAK 313 (350)
T ss_pred HhCCCCcEEEECCCCHHHHHHHHHHhhcC-CeEEEECCCCCCCcccHHHH-hhcCcEEEEcccCCH---HHHHHHHHHHH
Confidence 66558999999999778899999999997 99999987653322222222 337888887764332 56888999999
Q ss_pred ccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEe
Q 018529 315 NKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 351 (354)
Q Consensus 315 ~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~ 351 (354)
++.+.+. ..+.|+++++++|++.+.+++. +|++++
T Consensus 314 ~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 349 (350)
T cd08240 314 AGKLKPI--PLTERPLSDVNDALDDLKAGKVVGRAVLK 349 (350)
T ss_pred cCCCccc--eeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence 9977653 4678999999999999987765 688875
No 47
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=1.3e-42 Score=316.86 Aligned_cols=334 Identities=28% Similarity=0.413 Sum_probs=279.4
Q ss_pred cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018529 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90 (354)
Q Consensus 11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd 90 (354)
|||+++.+++.++++++.+.|.+.+++|+||+.++++|++|+....|..+...+|.++|+|++|+|+.+|++++.|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~Gd 80 (345)
T cd08260 1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGD 80 (345)
T ss_pred CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCCCC
Confidence 79999998887899999999999999999999999999999998887655455688999999999999999999999999
Q ss_pred EEEecccCCCCCCcccccCCCCCCccc----ccccccceeeEEeecc--ceEECCCCCCccchhhcccchhhhhhhhhhh
Q 018529 91 HVLPVFTGECGDCRHCRFSINGEPVNH----FLGTSTFSEYTVVHSG--CVAKINPLAPLDKVCILSCGVSTGLGATLNV 164 (354)
Q Consensus 91 ~V~~~~~~~~~~c~~c~~~~~~~~~~~----~~~~g~~a~~~~v~~~--~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~ 164 (354)
+|++.+..+|++|.+|..+....+..+ ....|+|++|+.+++. .++++|+++++++++.+++++.+||+++.+.
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~ 160 (345)
T cd08260 81 RVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRALVHQ 160 (345)
T ss_pred EEEECCCCCCCCCccccCcCcccCCCCcccccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHHHHHHHc
Confidence 999877788999999976553322222 2236899999999985 9999999999999999999999999998778
Q ss_pred cCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCC-CChhHHHHHHHHcCCCccEE
Q 018529 165 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE-HDRPIQEVIAEMTNGGVDRS 243 (354)
Q Consensus 165 ~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~-~~~~~~~~i~~~~~~~~dvv 243 (354)
+++.++++|+|+|+|++|++++++|+..|. .|+++++++++.++++++|++.++++++ .+ +.+.+..+..+++|++
T Consensus 161 ~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~--~~~~~~~~~~~~~d~v 237 (345)
T cd08260 161 ARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNASEVED--VAAAVRDLTGGGAHVS 237 (345)
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEccccchh--HHHHHHHHhCCCCCEE
Confidence 889999999999999999999999999999 8999999999999999999999998876 33 6677777766589999
Q ss_pred EEcccChHhHHHHHHHhhCCCceEEEEcCCCCCce-eecchhhh-ccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCC
Q 018529 244 VECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV-FMTKPINV-LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELE 321 (354)
Q Consensus 244 ~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~-~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (354)
||++|+...+..++++++++ |+++.+|....... ..+....+ .+++++.++... ..+.++.+++++.++++.+.
T Consensus 238 i~~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~i~~~ 313 (345)
T cd08260 238 VDALGIPETCRNSVASLRKR-GRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGM---PAHRYDAMLALIASGKLDPE 313 (345)
T ss_pred EEcCCCHHHHHHHHHHhhcC-CEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcC---CHHHHHHHHHHHHcCCCChh
Confidence 99999767889999999997 99999987543221 22333223 467788776532 23578899999999988765
Q ss_pred CceeeeeccccHHHHHHHHhcCCc-eeEEEe
Q 018529 322 KFITHRIPFSEINKAFEYMVKGEG-LRCIIS 351 (354)
Q Consensus 322 ~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~ 351 (354)
+.+.+.++++++++|++.+.+++. +|+|++
T Consensus 314 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 314 PLVGRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred hheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 556789999999999999988765 577653
No 48
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=7.5e-43 Score=323.56 Aligned_cols=336 Identities=18% Similarity=0.226 Sum_probs=269.7
Q ss_pred cchhcceeeecc--CCC---ceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCC----------CCCCCcccccc
Q 018529 7 LILTCKAAVAWE--AGK---PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ----------TPLFPRIFGHE 71 (354)
Q Consensus 7 ~~~~~~a~~~~~--~~~---~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~----------~~~~p~~~G~e 71 (354)
+|.+|+|+++.. ++. .+++.++|.|.++++||+||+.++++|++|++...+... ....+.++|||
T Consensus 9 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e 88 (393)
T cd08246 9 VPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSD 88 (393)
T ss_pred CchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccc
Confidence 789999999863 222 388999999999999999999999999999987765311 01223589999
Q ss_pred eeEEEEEeCCCCCCCCCCCEEEecccCCCCCCcccccCCCC-CCccccc----ccccceeeEEeeccceEECCCCCCccc
Q 018529 72 AAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSING-EPVNHFL----GTSTFSEYTVVHSGCVAKINPLAPLDK 146 (354)
Q Consensus 72 ~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~-~~~~~~~----~~g~~a~~~~v~~~~~~~~P~~~~~~~ 146 (354)
++|+|+++|++++.+++||+|++.+...|++|++|..+... |....+. ..|+|++|+.+++..++++|+++++++
T Consensus 89 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~~~ 168 (393)
T cd08246 89 ASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEE 168 (393)
T ss_pred eEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCHHH
Confidence 99999999999999999999999999999999999754322 2211122 248999999999999999999999999
Q ss_pred hhhcccchhhhhhhhhhh--cCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCC
Q 018529 147 VCILSCGVSTGLGATLNV--AKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 223 (354)
Q Consensus 147 aa~l~~~~~~a~~~l~~~--~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~ 223 (354)
++.+++++.+||+++... ++++++++|+|+|+ |++|++++++|+.+|+ .++++++++++.++++++|++.++++.+
T Consensus 169 aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~vv~~~~s~~~~~~~~~~G~~~~i~~~~ 247 (393)
T cd08246 169 AAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-NPVAVVSSEEKAEYCRALGAEGVINRRD 247 (393)
T ss_pred HhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCCEEEcccc
Confidence 999999999999997554 68999999999997 9999999999999999 7778889999999999999999888744
Q ss_pred CC--------------------hhHHHHHHHHcCC--CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeec
Q 018529 224 HD--------------------RPIQEVIAEMTNG--GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMT 281 (354)
Q Consensus 224 ~~--------------------~~~~~~i~~~~~~--~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~ 281 (354)
.+ ..+.+.+.+++++ ++|++||++|+ ..+..++++++++ |+++.+|...... ..+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~-~~~ 324 (393)
T cd08246 248 FDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGR-ATFPTSVFVCDRG-GMVVICAGTTGYN-HTY 324 (393)
T ss_pred cccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCch-HhHHHHHHHhccC-CEEEEEcccCCCC-CCC
Confidence 21 1255667777765 79999999997 7788999999997 9999998654221 122
Q ss_pred chh-hhccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcC-Cc-eeEEEe
Q 018529 282 KPI-NVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKG-EG-LRCIIS 351 (354)
Q Consensus 282 ~~~-~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~-~~-~k~vi~ 351 (354)
... .+.++.++.+++... .+++.++++++.++.+.+ .++++|+++++++|++.+.++ +. +|+++-
T Consensus 325 ~~~~l~~~~~~i~g~~~~~---~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~a~~~~~~~~~~~gkvvv~ 392 (393)
T cd08246 325 DNRYLWMRQKRIQGSHFAN---DREAAEANRLVMKGRIDP--CLSKVFSLDETPDAHQLMHRNQHHVGNMAVL 392 (393)
T ss_pred cHHHHhhheeEEEecccCc---HHHHHHHHHHHHcCCcee--eeeEEEeHHHHHHHHHHHHhCccccceEEEe
Confidence 222 234677788776433 246888999999997664 367899999999999999887 44 676653
No 49
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=2.3e-42 Score=317.20 Aligned_cols=341 Identities=27% Similarity=0.418 Sum_probs=269.1
Q ss_pred CCCcc--ccchhcceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCC---CCCCCcccccceeEE
Q 018529 1 MSSTA--GLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGV 75 (354)
Q Consensus 1 m~~~~--~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~---~~~~p~~~G~e~~G~ 75 (354)
||+-+ .+-.+|+++++..++. +++.+.+.|++.++||+||+.++++|++|+....+... ....|.++|||++|+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~ 84 (364)
T PLN02702 6 MSSGEGSGVEEENMAAWLVGVNT-LKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGI 84 (364)
T ss_pred cccCCCcccccccceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEE
Confidence 55543 2455677777777655 88999999889999999999999999999998765321 123577899999999
Q ss_pred EEEeCCCCCCCCCCCEEEecccCCCCCCcccccCCC-CCCccccc----ccccceeeEEeeccceEECCCCCCccchhhc
Q 018529 76 VESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSIN-GEPVNHFL----GTSTFSEYTVVHSGCVAKINPLAPLDKVCIL 150 (354)
Q Consensus 76 V~~vG~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~-~~~~~~~~----~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l 150 (354)
|+++|+++++|++||+|++.+..+|++|..|..+.. .|...... ..|+|++|+.++.+.++++|+++++.+++..
T Consensus 85 V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~ 164 (364)
T PLN02702 85 IEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMC 164 (364)
T ss_pred EEEECCCCCCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHHHhhh
Confidence 999999999999999999999999999999976542 22222212 2589999999999999999999999988763
Q ss_pred ccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHH
Q 018529 151 SCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQE 230 (354)
Q Consensus 151 ~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~ 230 (354)
.++.++|+++ ...++.++++|+|+|+|++|.+++++|+.+|++.|+++++++++.++++++|++.++++.....++.+
T Consensus 165 -~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 242 (364)
T PLN02702 165 -EPLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVES 242 (364)
T ss_pred -hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCcccccHHH
Confidence 2445578775 77889999999999989999999999999999778899999999999999999988776433233666
Q ss_pred HHHHH---cCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecch-hhhccccEEEEEeccCCCCCCCH
Q 018529 231 VIAEM---TNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFGNYKPRTDL 306 (354)
Q Consensus 231 ~i~~~---~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~~~~~~~~~~ 306 (354)
.+.++ +.+++|+|||++|+...+..++++++++ |+++.+|..... ..... ....+++++.+++.. ...+
T Consensus 243 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~~~~----~~~~ 315 (364)
T PLN02702 243 EVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGMGHNE--MTVPLTPAAAREVDVVGVFRY----RNTW 315 (364)
T ss_pred HHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCCC--CcccHHHHHhCccEEEEeccC----hHHH
Confidence 66554 3348999999999778899999999997 999999865422 12222 223478888887642 2468
Q ss_pred HHHHHHHHccCCCCCCceeeeecc--ccHHHHHHHHhcCCc-eeEEEe
Q 018529 307 PSVVDMYMNKQLELEKFITHRIPF--SEINKAFEYMVKGEG-LRCIIS 351 (354)
Q Consensus 307 ~~~~~~~~~~~~~~~~~v~~~~~l--~~~~~a~~~~~~~~~-~k~vi~ 351 (354)
+.+++++.++++.+.+.+.+.|++ +++++|++.+.+++. +|+||.
T Consensus 316 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 316 PLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred HHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 889999999988765556788665 799999999887765 688875
No 50
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1e-42 Score=316.72 Aligned_cols=317 Identities=19% Similarity=0.241 Sum_probs=252.7
Q ss_pred ccchhcceeeeccCC-C-c----eEEEE---eecCC-CCCCeEEEEEeeeecCccchhhhccCCCCCCCCccccc--cee
Q 018529 6 GLILTCKAAVAWEAG-K-P----LIIQD---VEVAP-PQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGH--EAA 73 (354)
Q Consensus 6 ~~~~~~~a~~~~~~~-~-~----l~~~~---~~~p~-~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~--e~~ 73 (354)
..++++|.+++-+.. . + +++.+ .+.|. +++||||||+.|+++|+.|.....+......+|+++|+ |++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~~~~ 83 (348)
T PLN03154 4 GQVVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRIEGF 83 (348)
T ss_pred CccccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCeeEee
Confidence 356677888885432 1 1 77776 36663 48999999999999999987654332222345889998 889
Q ss_pred EEEEEeCCCCCCCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccc--eEE--CCCCCCcc-chh
Q 018529 74 GVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGC--VAK--INPLAPLD-KVC 148 (354)
Q Consensus 74 G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~--~~~--~P~~~~~~-~aa 148 (354)
|+|..+|+++++|++||+|++. |+|+||+.++.+. +++ +|++++++ +|+
T Consensus 84 G~v~~vg~~v~~~~~Gd~V~~~--------------------------~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa 137 (348)
T PLN03154 84 GVSKVVDSDDPNFKPGDLISGI--------------------------TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLG 137 (348)
T ss_pred EEEEEEecCCCCCCCCCEEEec--------------------------CCcEEEEEEeccccceEEccCcCCCCHHHHHH
Confidence 9999999999999999999854 5899999998853 544 59999986 688
Q ss_pred hcccchhhhhhhhhhhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcCCceEEcCCCCCh
Q 018529 149 ILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDFVNTSEHDR 226 (354)
Q Consensus 149 ~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~lg~~~v~~~~~~~~ 226 (354)
+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++ ++|++.++++.+.+
T Consensus 138 ~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~- 215 (348)
T PLN03154 138 LLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYKEEP- 215 (348)
T ss_pred HcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhcCCCEEEECCCcc-
Confidence 899999999999878889999999999997 9999999999999999 8999999999999987 79999999986531
Q ss_pred hHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCce-e---ecchh-hhccccEEEEEeccCCC
Q 018529 227 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV-F---MTKPI-NVLNERTLKGTFFGNYK 301 (354)
Q Consensus 227 ~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~-~---~~~~~-~~~~~~~i~g~~~~~~~ 301 (354)
++.+.+++.+++++|++||++|+ ..+..++++++++ |+++.+|....... . ..... .+.+++++.|++...+.
T Consensus 216 ~~~~~i~~~~~~gvD~v~d~vG~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~ 293 (348)
T PLN03154 216 DLDAALKRYFPEGIDIYFDNVGG-DMLDAALLNMKIH-GRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYL 293 (348)
T ss_pred cHHHHHHHHCCCCcEEEEECCCH-HHHHHHHHHhccC-CEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHH
Confidence 27777887776689999999998 6889999999997 99999997542211 0 11222 23488999998754332
Q ss_pred C--CCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEecCC
Q 018529 302 P--RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISMED 354 (354)
Q Consensus 302 ~--~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~~d 354 (354)
. .+.++++++++.+|++++. +.++|+|+++++|++.+.+++. +|+||++.+
T Consensus 294 ~~~~~~~~~~~~l~~~G~l~~~--~~~~~~L~~~~~A~~~l~~g~~~GKvVl~~~~ 347 (348)
T PLN03154 294 HLFPQFLENVSRYYKQGKIVYI--EDMSEGLESAPAALVGLFSGKNVGKQVIRVAK 347 (348)
T ss_pred HHHHHHHHHHHHHHHCCCccCc--eecccCHHHHHHHHHHHHcCCCCceEEEEecC
Confidence 1 2357789999999987754 6678999999999999998886 699998753
No 51
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=2.7e-42 Score=314.61 Aligned_cols=331 Identities=28% Similarity=0.399 Sum_probs=270.0
Q ss_pred cceeeeccCCCceEEEEeecCCCC-CCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018529 11 CKAAVAWEAGKPLIIQDVEVAPPQ-AMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (354)
Q Consensus 11 ~~a~~~~~~~~~l~~~~~~~p~~~-~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~G 89 (354)
|||+++..++ .++++++++|.|. ++||+|++.++++|+.|+....+..+ ..+|.++|+|++|+|+++|++++++++|
T Consensus 1 ~~a~~~~~~~-~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~G 78 (344)
T cd08284 1 MKAVVFKGPG-DVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP-STPGFVLGHEFVGEVVEVGPEVRTLKVG 78 (344)
T ss_pred CeeEEEecCC-CceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC-CCCCcccccceEEEEEeeCCCccccCCC
Confidence 6899998775 4999999999985 99999999999999999988876544 3347789999999999999999999999
Q ss_pred CEEEecccCCCCCCcccccCCCCCC-cccc-------cccccceeeEEeecc--ceEECCCCCCccchhhcccchhhhhh
Q 018529 90 DHVLPVFTGECGDCRHCRFSINGEP-VNHF-------LGTSTFSEYTVVHSG--CVAKINPLAPLDKVCILSCGVSTGLG 159 (354)
Q Consensus 90 d~V~~~~~~~~~~c~~c~~~~~~~~-~~~~-------~~~g~~a~~~~v~~~--~~~~~P~~~~~~~aa~l~~~~~~a~~ 159 (354)
|+|++.+..+|++|.+|..+....+ .... ...|+|++|+.++++ .++++|+++++++++.+++++++||+
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~ta~~ 158 (344)
T cd08284 79 DRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTGYF 158 (344)
T ss_pred CEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchHHHHh
Confidence 9999999999999999976543321 1111 125899999999975 99999999999999999999999999
Q ss_pred hhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-
Q 018529 160 ATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG- 238 (354)
Q Consensus 160 ~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~- 238 (354)
++. ..++.++++|||+|+|.+|++++++|+.+|+.+|+++++++++.++++++|+. .++..+.+ +.+.+.+++++
T Consensus 159 ~~~-~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~--~~~~l~~~~~~~ 234 (344)
T cd08284 159 GAK-RAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINFEDAE--PVERVREATEGR 234 (344)
T ss_pred hhH-hcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEecCCcC--HHHHHHHHhCCC
Confidence 974 57899999999998899999999999999975788888899999999999975 45555443 77778887776
Q ss_pred CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCCCCHHHHHHHHHccCC
Q 018529 239 GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQL 318 (354)
Q Consensus 239 ~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~ 318 (354)
++|++||++|+...+..++++++++ |+++.+|..............+.+++++.+.. ...++.+.++++++.++++
T Consensus 235 ~~dvvid~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i 310 (344)
T cd08284 235 GADVVLEAVGGAAALDLAFDLVRPG-GVISSVGVHTAEEFPFPGLDAYNKNLTLRFGR---CPVRSLFPELLPLLESGRL 310 (344)
T ss_pred CCCEEEECCCCHHHHHHHHHhcccC-CEEEEECcCCCCCccccHHHHhhcCcEEEEec---CCcchhHHHHHHHHHcCCC
Confidence 8999999999877899999999997 99999987642211111122234677776542 2234678999999999988
Q ss_pred CCCCceeeeeccccHHHHHHHHhcCCceeEEEe
Q 018529 319 ELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS 351 (354)
Q Consensus 319 ~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~ 351 (354)
.+...+.+.+++++++++++.+.+++.+|+|++
T Consensus 311 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~Vi~ 343 (344)
T cd08284 311 DLEFLIDHRMPLEEAPEAYRLFDKRKVLKVVLD 343 (344)
T ss_pred ChHHhEeeeecHHHHHHHHHHHhcCCceEEEec
Confidence 765556788999999999998887666788774
No 52
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=3.5e-42 Score=313.49 Aligned_cols=324 Identities=22% Similarity=0.326 Sum_probs=264.3
Q ss_pred cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCC-----------CCCCCcccccceeEEEEEe
Q 018529 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-----------TPLFPRIFGHEAAGVVESV 79 (354)
Q Consensus 11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~-----------~~~~p~~~G~e~~G~V~~v 79 (354)
|||+++..+ ++++++.+.|+++++||+|||.++++|+.|+....|... ...+|.++|+|++|+|+++
T Consensus 1 m~a~~~~~~--~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~v 78 (341)
T cd08262 1 MRAAVFRDG--PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDY 78 (341)
T ss_pred CceEEEeCC--ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEe
Confidence 689998766 599999999999999999999999999999998876321 2235788999999999999
Q ss_pred CCCCCC-CCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhh
Q 018529 80 GEGVSD-LEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGL 158 (354)
Q Consensus 80 G~~~~~-~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~ 158 (354)
|+++++ |++||+|++.+...|+.|+.|..+..+ ...|+|++|+.++.+.++++|+++++++++ +++++++||
T Consensus 79 G~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~------~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~ 151 (341)
T cd08262 79 GPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSP------EAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVGL 151 (341)
T ss_pred CCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCc------CCCCceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHHH
Confidence 999987 999999999999999999999533221 245899999999999999999999999877 667889999
Q ss_pred hhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCCh--hHHHHHHHHc
Q 018529 159 GATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR--PIQEVIAEMT 236 (354)
Q Consensus 159 ~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~--~~~~~i~~~~ 236 (354)
++ ...++++++++|||+|+|++|.+++|+|+.+|++.++++++++++.++++++|+++++++.+.+. .+. .+....
T Consensus 152 ~~-~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~-~~~~~~ 229 (341)
T cd08262 152 HA-VRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWA-AELARA 229 (341)
T ss_pred HH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHH-HHHHHh
Confidence 98 57889999999999988999999999999999967888888999999999999988888765431 222 334444
Q ss_pred CC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchh-hhccccEEEEEeccCCCCCCCHHHHHHHHH
Q 018529 237 NG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYKPRTDLPSVVDMYM 314 (354)
Q Consensus 237 ~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~ 314 (354)
.+ ++|++||++|+...+..++++++++ |+++.+|....... .... .+.+++++.++... ..++++++++++.
T Consensus 230 ~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~ 303 (341)
T cd08262 230 GGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGVCMESDN--IEPALAIRKELTLQFSLGY---TPEEFADALDALA 303 (341)
T ss_pred CCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCCc--cCHHHHhhcceEEEEEecc---cHHHHHHHHHHHH
Confidence 44 8999999998855788899999997 99999987642221 1221 13467777654422 2246889999999
Q ss_pred ccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEe
Q 018529 315 NKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 351 (354)
Q Consensus 315 ~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~ 351 (354)
++.+.+.+.+.+.+++++++++++.+.+++. +|+|++
T Consensus 304 ~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 304 EGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred cCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 9988876667789999999999999988775 688763
No 53
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=9.5e-42 Score=310.60 Aligned_cols=333 Identities=29% Similarity=0.418 Sum_probs=269.0
Q ss_pred cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCC---CCCCCCcccccceeEEEEEeCCCCCCCC
Q 018529 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG---QTPLFPRIFGHEAAGVVESVGEGVSDLE 87 (354)
Q Consensus 11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~---~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 87 (354)
||++++.+++..+++.+.|.|.|+++||+||+.++++|++|+.++.+.. ....+|.++|||++|+|+++|+++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~ 80 (341)
T PRK05396 1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK 80 (341)
T ss_pred CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCC
Confidence 6899999988779999999999999999999999999999998765532 1234678899999999999999999999
Q ss_pred CCCEEEecccCCCCCCcccccCCCCC-Cc---ccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhh
Q 018529 88 VGDHVLPVFTGECGDCRHCRFSINGE-PV---NHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN 163 (354)
Q Consensus 88 ~Gd~V~~~~~~~~~~c~~c~~~~~~~-~~---~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~ 163 (354)
+||+|++.+.++|+.|..|..+.... +. .+....|+|++|+.++.+.++++|+++++.+++.+ .++.++++++..
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~~~~~~~~~~~ 159 (341)
T PRK05396 81 VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIF-DPFGNAVHTALS 159 (341)
T ss_pred CCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEECcCCCCHHHhHhh-hHHHHHHHHHHc
Confidence 99999999999999999997654321 11 11224589999999999999999999999888754 466666665432
Q ss_pred hcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccE
Q 018529 164 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDR 242 (354)
Q Consensus 164 ~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dv 242 (354)
...+|++|+|.|+|++|.+++|+|+.+|+++|+++++++++.++++++|++.++++.+.+ +.+.+++++++ ++|+
T Consensus 160 --~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~~~--~~~~~~~~~~~~~~d~ 235 (341)
T PRK05396 160 --FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAKED--LRDVMAELGMTEGFDV 235 (341)
T ss_pred --CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCcccc--HHHHHHHhcCCCCCCE
Confidence 346899999998899999999999999986688888899999999999999998887655 77888888776 8999
Q ss_pred EEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCC
Q 018529 243 SVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEK 322 (354)
Q Consensus 243 v~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (354)
||||.|+...+..++++++++ |+++.+|.........+ ...+.+++++.++... ...+.+..+++++.++ +.+.+
T Consensus 236 v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~-~~~~~ 310 (341)
T PRK05396 236 GLEMSGAPSAFRQMLDNMNHG-GRIAMLGIPPGDMAIDW-NKVIFKGLTIKGIYGR--EMFETWYKMSALLQSG-LDLSP 310 (341)
T ss_pred EEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCCCcccH-HHHhhcceEEEEEEcc--CccchHHHHHHHHHcC-CChhH
Confidence 999999878889999999997 99999987543222222 2223477888876522 1223466788888888 54555
Q ss_pred ceeeeeccccHHHHHHHHhcCCceeEEEecC
Q 018529 323 FITHRIPFSEINKAFEYMVKGEGLRCIISME 353 (354)
Q Consensus 323 ~v~~~~~l~~~~~a~~~~~~~~~~k~vi~~~ 353 (354)
.+.+.++++++.+||+.+.+++.+|+|++++
T Consensus 311 ~~~~~~~l~~~~~a~~~~~~~~~gk~vv~~~ 341 (341)
T PRK05396 311 IITHRFPIDDFQKGFEAMRSGQSGKVILDWD 341 (341)
T ss_pred heEEEEeHHHHHHHHHHHhcCCCceEEEecC
Confidence 5778999999999999988776679988764
No 54
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=1.2e-41 Score=310.26 Aligned_cols=332 Identities=29% Similarity=0.465 Sum_probs=272.7
Q ss_pred cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018529 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90 (354)
Q Consensus 11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd 90 (354)
|||+++.+++. +.+.+.+.|++.+++|+||+.++++|+.|+....+..+...+|.++|+|++|+|+++|++++.+++||
T Consensus 1 ~~~~~~~~~~~-~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd 79 (343)
T cd08235 1 MKAAVLHGPND-VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGD 79 (343)
T ss_pred CeEEEEecCCc-eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCCCC
Confidence 68999988875 99999999999999999999999999999998877553334577899999999999999999999999
Q ss_pred EEEecccCCCCCCcccccCCCCC-Cccc---ccccccceeeEEeeccc-----eEECCCCCCccchhhcccchhhhhhhh
Q 018529 91 HVLPVFTGECGDCRHCRFSINGE-PVNH---FLGTSTFSEYTVVHSGC-----VAKINPLAPLDKVCILSCGVSTGLGAT 161 (354)
Q Consensus 91 ~V~~~~~~~~~~c~~c~~~~~~~-~~~~---~~~~g~~a~~~~v~~~~-----~~~~P~~~~~~~aa~l~~~~~~a~~~l 161 (354)
+|++.+..+|++|++|..++.+. +.+. ....|+|++|+.++++. ++++|+++++.+|+.+ +++.+||+++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l 158 (343)
T cd08235 80 RVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPLACCINAQ 158 (343)
T ss_pred EEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-hHHHHHHHHH
Confidence 99999999999999997665432 2221 22458999999999998 9999999999999876 7889999987
Q ss_pred hhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-Cc
Q 018529 162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GV 240 (354)
Q Consensus 162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~ 240 (354)
. ..++++|++|||+|+|.+|++++|+|+..|++.|+++++++++.+.++++|.+.++++++.+ +.+.+.+++.+ ++
T Consensus 159 ~-~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~~~--~~~~i~~~~~~~~v 235 (343)
T cd08235 159 R-KAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAEED--LVEKVRELTDGRGA 235 (343)
T ss_pred H-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCCccC--HHHHHHHHhCCcCC
Confidence 4 45899999999998899999999999999994488998999999999999998888877655 77788887776 89
Q ss_pred cEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchh-hhccccEEEEEeccCCCCCCCHHHHHHHHHccCCC
Q 018529 241 DRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE 319 (354)
Q Consensus 241 dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (354)
|+|||++++...+..++++++++ |+++.++............. ...+++.+.++... ..+.++++++++.++.+.
T Consensus 236 d~vld~~~~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~l~~~~~l~ 311 (343)
T cd08235 236 DVVIVATGSPEAQAQALELVRKG-GRILFFGGLPKGSTVNIDPNLIHYREITITGSYAA---SPEDYKEALELIASGKID 311 (343)
T ss_pred CEEEECCCChHHHHHHHHHhhcC-CEEEEEeccCCCCCcccCHHHHhhCceEEEEEecC---ChhhHHHHHHHHHcCCCC
Confidence 99999999867889999999997 99999986543222222222 23367777765532 235688899999999877
Q ss_pred CCCceeeeeccccHHHHHHHHhcCCceeEEEe
Q 018529 320 LEKFITHRIPFSEINKAFEYMVKGEGLRCIIS 351 (354)
Q Consensus 320 ~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~ 351 (354)
+.+.+...|+++++.++++.+.+++.+|+|++
T Consensus 312 ~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~ 343 (343)
T cd08235 312 VKDLITHRFPLEDIEEAFELAADGKSLKIVIT 343 (343)
T ss_pred hHHheeeEeeHHHHHHHHHHHhCCCcEEEEeC
Confidence 54446788999999999999988774577764
No 55
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=9.3e-42 Score=314.07 Aligned_cols=332 Identities=26% Similarity=0.355 Sum_probs=266.9
Q ss_pred cceeeeccCCCceEEEEeecCCC-CCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018529 11 CKAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (354)
Q Consensus 11 ~~a~~~~~~~~~l~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~G 89 (354)
||++++.+++. ++++++|+|.+ +++||+|||.++++|++|++...|..+ ..+|.++|||++|+|+++|++++.+++|
T Consensus 1 m~~~~~~~~~~-~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~~G 78 (375)
T cd08282 1 MKAVVYGGPGN-VAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG-AEPGLVLGHEAMGEVEEVGSAVESLKVG 78 (375)
T ss_pred CceEEEecCCc-eeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-CCCCceeccccEEEEEEeCCCCCcCCCC
Confidence 68899988774 99999999996 799999999999999999999877554 3458899999999999999999999999
Q ss_pred CEEEecccCCCCCCcccccCCCCCCc-c---------cc----cccccceeeEEeecc--ceEECCCCCCcc---chhhc
Q 018529 90 DHVLPVFTGECGDCRHCRFSINGEPV-N---------HF----LGTSTFSEYTVVHSG--CVAKINPLAPLD---KVCIL 150 (354)
Q Consensus 90 d~V~~~~~~~~~~c~~c~~~~~~~~~-~---------~~----~~~g~~a~~~~v~~~--~~~~~P~~~~~~---~aa~l 150 (354)
|+|++.+..+|+.|..|..+...... + ++ ...|+|++|+.+|.+ .++++|+++++. +++.+
T Consensus 79 d~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~a~~ 158 (375)
T cd08282 79 DRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYLML 158 (375)
T ss_pred CEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhhhheeee
Confidence 99999999999999998765432111 0 11 124899999999976 899999999998 56778
Q ss_pred ccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHH
Q 018529 151 SCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQE 230 (354)
Q Consensus 151 ~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~ 230 (354)
.+++++||+++ ..+++++|++|+|.|+|++|++++|+|+++|+.+|+++++++++.++++++|+ ..+++.+.+ +.+
T Consensus 159 ~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~-~~v~~~~~~--~~~ 234 (375)
T cd08282 159 SDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGA-IPIDFSDGD--PVE 234 (375)
T ss_pred cchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC-eEeccCccc--HHH
Confidence 88999999997 78899999999999889999999999999997678889999999999999998 455655433 777
Q ss_pred HHHHHcCCCccEEEEcccChH-----------hHHHHHHHhhCCCceEEEEcCCCCCce-----------eecchhh-hc
Q 018529 231 VIAEMTNGGVDRSVECTGNID-----------NMISAFECVHDGWGVAVLVGVPSKDAV-----------FMTKPIN-VL 287 (354)
Q Consensus 231 ~i~~~~~~~~dvv~d~~g~~~-----------~~~~~~~~l~~~~g~~v~~g~~~~~~~-----------~~~~~~~-~~ 287 (354)
.+.+++++++|++|||+|+.. .+..++++++++ |+++.+|....... ..+.... +.
T Consensus 235 ~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (375)
T cd08282 235 QILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPG-GGIGIVGVYVAEDPGAGDAAAKQGELSFDFGLLWA 313 (375)
T ss_pred HHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcC-cEEEEEeccCCcccccccccccCccccccHHHHHh
Confidence 787776668999999998742 488999999997 99998876431100 1112222 23
Q ss_pred cccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCceeEEEec
Q 018529 288 NERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM 352 (354)
Q Consensus 288 ~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~~ 352 (354)
++..+.+... ...+.+..+++++.++++.+...+.+.|+++++++|++.+.+++.+|+|+++
T Consensus 314 ~~~~~~~~~~---~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~kvvv~~ 375 (375)
T cd08282 314 KGLSFGTGQA---PVKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRLETKVVIKP 375 (375)
T ss_pred cCcEEEEecC---CchhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCCceEEEeCC
Confidence 5556655432 1235688899999999887655578999999999999999887756888753
No 56
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=7.8e-42 Score=316.87 Aligned_cols=338 Identities=18% Similarity=0.234 Sum_probs=270.9
Q ss_pred cchhcceeeecc--CCC---ceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCC----------CCCCCC-ccccc
Q 018529 7 LILTCKAAVAWE--AGK---PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG----------QTPLFP-RIFGH 70 (354)
Q Consensus 7 ~~~~~~a~~~~~--~~~---~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~----------~~~~~p-~~~G~ 70 (354)
+|.+|||+++.. +++ .+++.+.+.|.|+++|++||+.++++|++|.+...+.. .....| .++||
T Consensus 4 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~ 83 (398)
T TIGR01751 4 VPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGS 83 (398)
T ss_pred cchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceeccc
Confidence 688999999954 443 38999999999999999999999999999987654421 011223 37999
Q ss_pred ceeEEEEEeCCCCCCCCCCCEEEecccCCCCCCcccccCCCC-CCccccc----ccccceeeEEeeccceEECCCCCCcc
Q 018529 71 EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSING-EPVNHFL----GTSTFSEYTVVHSGCVAKINPLAPLD 145 (354)
Q Consensus 71 e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~-~~~~~~~----~~g~~a~~~~v~~~~~~~~P~~~~~~ 145 (354)
|++|+|+++|++++.+++||+|++.+...|++|++|+.+... +...... ..|+|+||+.++++.++++|++++++
T Consensus 84 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~~~ 163 (398)
T TIGR01751 84 DASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWE 163 (398)
T ss_pred ceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCCHH
Confidence 999999999999999999999999999999999999865322 2221122 34899999999999999999999999
Q ss_pred chhhcccchhhhhhhhhh--hcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCC
Q 018529 146 KVCILSCGVSTGLGATLN--VAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 222 (354)
Q Consensus 146 ~aa~l~~~~~~a~~~l~~--~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~ 222 (354)
+++.+.+.+.+||+++.. .++++++++|+|+|+ |++|++++++|+.+|+ +++++++++++.+.++++|++.+++.+
T Consensus 164 ~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~vi~~~~~~~~~~~~~~~g~~~~v~~~ 242 (398)
T TIGR01751 164 EAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-NPVAVVSSPEKAEYCRELGAEAVIDRN 242 (398)
T ss_pred HHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCCEEecCC
Confidence 999999999999998654 477899999999997 9999999999999999 777788899999999999999999875
Q ss_pred CCC--------------------hhHHHHHHHHcCC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeec
Q 018529 223 EHD--------------------RPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMT 281 (354)
Q Consensus 223 ~~~--------------------~~~~~~i~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~ 281 (354)
+.+ ..+.+.+.+++.+ ++|++|||+|. ..+..++++++++ |+++.+|..... ....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~ 319 (398)
T TIGR01751 243 DFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGR-ATFPTSVFVCRRG-GMVVICGGTTGY-NHDY 319 (398)
T ss_pred CcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcH-HHHHHHHHhhccC-CEEEEEccccCC-CCCc
Confidence 421 1255667777776 89999999987 6788999999997 999999876422 1222
Q ss_pred chh-hhccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEecC
Q 018529 282 KPI-NVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME 353 (354)
Q Consensus 282 ~~~-~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~~ 353 (354)
... .+.++.++.++..... .+++++++++.++++... +++++++++++++++.+.+++. +|+|+.+.
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~l~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~ 388 (398)
T TIGR01751 320 DNRYLWMRQKRIQGSHFANL---REAWEANRLVAKGRIDPT--LSKVYPLEEIGQAHQDVHRNHHQGNVAVLVL 388 (398)
T ss_pred CHHHHhhcccEEEccccCcH---HHHHHHHHHHHCCCcccc--eeeEEcHHHHHHHHHHHHcCCCCceEEEEeC
Confidence 222 2336667777654322 347889999999977643 6789999999999999988775 68888764
No 57
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=2.1e-41 Score=307.89 Aligned_cols=329 Identities=32% Similarity=0.523 Sum_probs=272.8
Q ss_pred cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018529 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90 (354)
Q Consensus 11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd 90 (354)
|||+++.+++. +++.+.+.|.++++||+|+|.++++|+.|+....+..+...+|.++|+|++|+|+.+|++++.|++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd 79 (337)
T cd08261 1 MKALVCEKPGR-LEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKVGD 79 (337)
T ss_pred CeEEEEeCCCc-eEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCCCC
Confidence 68999988875 99999999999999999999999999999998877655445578899999999999999999999999
Q ss_pred EEEecccCCCCCCcccccCCCCCCcc----cccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcC
Q 018529 91 HVLPVFTGECGDCRHCRFSINGEPVN----HFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 166 (354)
Q Consensus 91 ~V~~~~~~~~~~c~~c~~~~~~~~~~----~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~ 166 (354)
+|++.+..+|+.|..|..+..+.+.. .....|+|++|+.++++ ++++|+++++++++++ ..++++++++ ...+
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~~-~~~~ 156 (337)
T cd08261 80 RVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHAV-RRAG 156 (337)
T ss_pred EEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHHH-HhcC
Confidence 99998888999999996544332211 12236899999999999 9999999999999877 4778888876 7789
Q ss_pred CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEEE
Q 018529 167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVE 245 (354)
Q Consensus 167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d 245 (354)
++++++|||+|+|.+|.+++|+|+.+|. +|+++++++++.++++++|+++++++.+.+ +.+.+.+++++ ++|++||
T Consensus 157 l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~~~~--~~~~l~~~~~~~~vd~vld 233 (337)
T cd08261 157 VTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVGDED--VAARLRELTDGEGADVVID 233 (337)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCcccC--HHHHHHHHhCCCCCCEEEE
Confidence 9999999999889999999999999999 899998999999999999999999887754 77888888776 8999999
Q ss_pred cccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhc-cccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCce
Q 018529 246 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFI 324 (354)
Q Consensus 246 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 324 (354)
+.|+...+..++++++++ |+++.++..... ..+....+. +++++.+.. ....+.++++++++.++.+.+.+.+
T Consensus 234 ~~g~~~~~~~~~~~l~~~-G~~i~~g~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~i~~~~~~ 307 (337)
T cd08261 234 ATGNPASMEEAVELVAHG-GRVVLVGLSKGP--VTFPDPEFHKKELTILGSR---NATREDFPDVIDLLESGKVDPEALI 307 (337)
T ss_pred CCCCHHHHHHHHHHHhcC-CEEEEEcCCCCC--CccCHHHHHhCCCEEEEec---cCChhhHHHHHHHHHcCCCChhhhe
Confidence 998877889999999997 999999865422 222222233 667776653 2233568889999999988763346
Q ss_pred eeeeccccHHHHHHHHhcCC-c-eeEEEec
Q 018529 325 THRIPFSEINKAFEYMVKGE-G-LRCIISM 352 (354)
Q Consensus 325 ~~~~~l~~~~~a~~~~~~~~-~-~k~vi~~ 352 (354)
...++++++.++++.+.+++ . +|+|+++
T Consensus 308 ~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 308 THRFPFEDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred EEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 78999999999999998873 4 6888864
No 58
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.2e-41 Score=310.61 Aligned_cols=330 Identities=28% Similarity=0.406 Sum_probs=270.6
Q ss_pred cceeeeccCCCceEEEEeecCCC-CCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018529 11 CKAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (354)
Q Consensus 11 ~~a~~~~~~~~~l~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~G 89 (354)
|||+++++++. +++.+.|.|.| +++||+||+.++++|++|+..+.|..+. ..|.++|||++|+|+++|+++..+++|
T Consensus 1 m~~~~~~~~~~-~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~vG~~v~~~~~G 78 (345)
T cd08287 1 MRATVIHGPGD-IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT-RAPAPIGHEFVGVVEEVGSEVTSVKPG 78 (345)
T ss_pred CceeEEecCCc-eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC-CCCcccccceEEEEEEeCCCCCccCCC
Confidence 78999988776 99999999996 8999999999999999999888765442 347899999999999999999999999
Q ss_pred CEEEecccCCCCCCcccccCCCC-CCcccc---cccccceeeEEeecc--ceEECCCCCCccchh-----hcccchhhhh
Q 018529 90 DHVLPVFTGECGDCRHCRFSING-EPVNHF---LGTSTFSEYTVVHSG--CVAKINPLAPLDKVC-----ILSCGVSTGL 158 (354)
Q Consensus 90 d~V~~~~~~~~~~c~~c~~~~~~-~~~~~~---~~~g~~a~~~~v~~~--~~~~~P~~~~~~~aa-----~l~~~~~~a~ 158 (354)
|+|++.+..+|+.|.+|..+... +....+ ...|+|++|+.++.+ .++++|++++++.+. .+.+.+++||
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~~~~~a~ 158 (345)
T cd08287 79 DFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMGTGH 158 (345)
T ss_pred CEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhcHHHHHH
Confidence 99998677889999999765432 222112 234899999999975 999999999882221 2235788899
Q ss_pred hhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC
Q 018529 159 GATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG 238 (354)
Q Consensus 159 ~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~ 238 (354)
+++ ..+++++|++|+|.|+|++|++++|+|+..|++.++++++++++.++++++|++.++++.+.+ +.+.+.+++++
T Consensus 159 ~~~-~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~~~--~~~~i~~~~~~ 235 (345)
T cd08287 159 HAA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERGEE--AVARVRELTGG 235 (345)
T ss_pred HHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCccc--HHHHHHHhcCC
Confidence 985 578899999999998899999999999999996699999999999999999999999887654 77788888776
Q ss_pred -CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecch-hhhccccEEEEEeccCCCCCCCHHHHHHHHHcc
Q 018529 239 -GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 316 (354)
Q Consensus 239 -~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~ 316 (354)
++|+++|++|+...+..++++++++ |+++.++.... ...+.. ..+.+++++.+... ...+.++++++++.++
T Consensus 236 ~~~d~il~~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 309 (345)
T cd08287 236 VGADAVLECVGTQESMEQAIAIARPG-GRVGYVGVPHG--GVELDVRELFFRNVGLAGGPA---PVRRYLPELLDDVLAG 309 (345)
T ss_pred CCCCEEEECCCCHHHHHHHHHhhccC-CEEEEecccCC--CCccCHHHHHhcceEEEEecC---CcHHHHHHHHHHHHcC
Confidence 8999999999878899999999997 99999986542 222333 33558888877532 1234688999999999
Q ss_pred CCCCCCceeeeeccccHHHHHHHHhcCCceeEEEe
Q 018529 317 QLELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS 351 (354)
Q Consensus 317 ~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi~ 351 (354)
++.+.+.+.+.++++++++|++.+.+++..|++|+
T Consensus 310 ~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~~~~ 344 (345)
T cd08287 310 RINPGRVFDLTLPLDEVAEGYRAMDERRAIKVLLR 344 (345)
T ss_pred CCCHHHhEEeeecHHHHHHHHHHHhCCCceEEEeC
Confidence 88765556789999999999999888777798885
No 59
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=3.5e-41 Score=311.09 Aligned_cols=332 Identities=27% Similarity=0.372 Sum_probs=264.8
Q ss_pred cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCC------C-CCCCCcccccceeEEEEEeCCCC
Q 018529 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG------Q-TPLFPRIFGHEAAGVVESVGEGV 83 (354)
Q Consensus 11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~------~-~~~~p~~~G~e~~G~V~~vG~~~ 83 (354)
+.+.++.. . ++++++.+.|+++++||+||+.++++|++|+..+.+.. + ...+|.++|||++|+|+++|+++
T Consensus 29 ~~~~~~~~-~-~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v 106 (384)
T cd08265 29 LGSKVWRY-P-ELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNV 106 (384)
T ss_pred ceeEEEeC-C-CEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCC
Confidence 34444443 3 39999999999999999999999999999998876321 1 13457899999999999999999
Q ss_pred CCCCCCCEEEecccCCCCCCcccccCCCC-CCcccccc---cccceeeEEeeccceEECCCCC-------Cccchhhccc
Q 018529 84 SDLEVGDHVLPVFTGECGDCRHCRFSING-EPVNHFLG---TSTFSEYTVVHSGCVAKINPLA-------PLDKVCILSC 152 (354)
Q Consensus 84 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~-~~~~~~~~---~g~~a~~~~v~~~~~~~~P~~~-------~~~~aa~l~~ 152 (354)
++|++||+|++.+..+|+.|++|+.+... |..+...+ .|+|++|+.++++.++++|+++ ++. +++++.
T Consensus 107 ~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~ 185 (384)
T cd08265 107 KNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVE 185 (384)
T ss_pred CCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHHeEECCccccccccCCCHH-Hhhhhh
Confidence 99999999999999999999999866533 22222222 5899999999999999999864 444 566777
Q ss_pred chhhhhhhhhhh-cCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCC-ChhHHH
Q 018529 153 GVSTGLGATLNV-AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH-DRPIQE 230 (354)
Q Consensus 153 ~~~~a~~~l~~~-~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~-~~~~~~ 230 (354)
++++||+++... .++++|++|||+|+|++|++++++|+..|+.+|+++++++++.+.++++|+++++++.+. ..++.+
T Consensus 186 ~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~ 265 (384)
T cd08265 186 PTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGE 265 (384)
T ss_pred HHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccHHH
Confidence 889999997655 689999999999889999999999999998779999999999999999999988887653 224777
Q ss_pred HHHHHcCC-CccEEEEcccCh-HhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhh-ccccEEEEEeccCCCCCCCHH
Q 018529 231 VIAEMTNG-GVDRSVECTGNI-DNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYKPRTDLP 307 (354)
Q Consensus 231 ~i~~~~~~-~~dvv~d~~g~~-~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~ 307 (354)
.+.+++.+ ++|+|+|++|.+ ..+..++++++++ |+++.+|..... .......+ .+..++.++... .....+.
T Consensus 266 ~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~l~~~~~~--~~~~~~~ 340 (384)
T cd08265 266 KVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAIN-GKIVYIGRAATT--VPLHLEVLQVRRAQIVGAQGH--SGHGIFP 340 (384)
T ss_pred HHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcC-CEEEEECCCCCC--CcccHHHHhhCceEEEEeecc--CCcchHH
Confidence 88888877 899999999873 4788999999997 999999865422 22222222 356677776532 2234689
Q ss_pred HHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCceeEEE
Q 018529 308 SVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII 350 (354)
Q Consensus 308 ~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~~k~vi 350 (354)
++++++.++.+.+..++.+.|+++++.+|++.+.++..+|+|+
T Consensus 341 ~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv 383 (384)
T cd08265 341 SVIKLMASGKIDMTKIITARFPLEGIMEAIKAASERTDGKITI 383 (384)
T ss_pred HHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEe
Confidence 9999999998876555778899999999999977766667765
No 60
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=2.1e-41 Score=306.30 Aligned_cols=309 Identities=22% Similarity=0.293 Sum_probs=258.3
Q ss_pred cceeeeccCCCc---eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCC-CCCCCcccccceeEEEEEeCCCCCCC
Q 018529 11 CKAAVAWEAGKP---LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDL 86 (354)
Q Consensus 11 ~~a~~~~~~~~~---l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~~~~~ 86 (354)
|||+++.+++.+ +++.++|.|.+.++||+|||.++++|++|+..+.|..+ ....|.++|||++|+|+++|++++++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~ 80 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL 80 (324)
T ss_pred CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence 689999887753 78899999999999999999999999999998877654 23468899999999999999999999
Q ss_pred CCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcC
Q 018529 87 EVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 166 (354)
Q Consensus 87 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~ 166 (354)
++||+|++.+ ..|+|++|+.++++.++++|+++++++++.+++.+.++|+++ ...+
T Consensus 81 ~~Gd~V~~~~-----------------------~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~-~~~~ 136 (324)
T cd08292 81 QVGQRVAVAP-----------------------VHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLL-DFLG 136 (324)
T ss_pred CCCCEEEecc-----------------------CCCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHH-HhhC
Confidence 9999998652 247999999999999999999999999999998999999985 5688
Q ss_pred CCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEE
Q 018529 167 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSV 244 (354)
Q Consensus 167 ~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~ 244 (354)
+++|++|||+|+ |.+|++++|+|+.+|+ .++++.+++++.+.++++|++.++++.+.+ +.+.+.+++++ ++|+||
T Consensus 137 ~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~i~~~~~~~~~d~v~ 213 (324)
T cd08292 137 VKPGQWLIQNAAGGAVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVVSTEQPG--WQDKVREAAGGAPISVAL 213 (324)
T ss_pred CCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEEcCCCch--HHHHHHHHhCCCCCcEEE
Confidence 999999999987 9999999999999999 788888888888888889998888876654 88888888887 999999
Q ss_pred EcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchh-hhccccEEEEEeccCCCC-------CCCHHHHHHHHHcc
Q 018529 245 ECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYKP-------RTDLPSVVDMYMNK 316 (354)
Q Consensus 245 d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~-------~~~~~~~~~~~~~~ 316 (354)
|++|+ .....++++++++ |+++.+|... .....+... .+.++.++.++....+.. .+.+..+++++.++
T Consensus 214 d~~g~-~~~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 290 (324)
T cd08292 214 DSVGG-KLAGELLSLLGEG-GTLVSFGSMS-GEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKG 290 (324)
T ss_pred ECCCC-hhHHHHHHhhcCC-cEEEEEecCC-CCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCC
Confidence 99998 5778999999997 9999998753 222222222 234888888877543211 13578899999999
Q ss_pred CCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEe
Q 018529 317 QLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 351 (354)
Q Consensus 317 ~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~ 351 (354)
.+.+. +.+.|+++++.+|++.+.+++. +|+|++
T Consensus 291 ~i~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 291 QLLLP--VEAVFDLGDAAKAAAASMRPGRAGKVLLR 324 (324)
T ss_pred CccCc--cccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence 87754 4678999999999999887654 577763
No 61
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=3.3e-41 Score=304.28 Aligned_cols=312 Identities=26% Similarity=0.379 Sum_probs=256.1
Q ss_pred cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018529 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90 (354)
Q Consensus 11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd 90 (354)
|||+++.++++ +++.+++.|+++++||+||+.++++|++|+....|..+ .|.++|||++|+|+++|++ +++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~---~~~~~G~e~~G~Vv~~G~~---~~~G~ 73 (319)
T cd08242 1 MKALVLDGGLD-LRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP---FPGVPGHEFVGIVEEGPEA---ELVGK 73 (319)
T ss_pred CeeEEEeCCCc-EEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC---CCCccCceEEEEEEEeCCC---CCCCC
Confidence 68999988764 99999999999999999999999999999998876443 5778999999999999987 67999
Q ss_pred EEEecccCCCCCCcccccCCCCC----Ccccc-cccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhc
Q 018529 91 HVLPVFTGECGDCRHCRFSINGE----PVNHF-LGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA 165 (354)
Q Consensus 91 ~V~~~~~~~~~~c~~c~~~~~~~----~~~~~-~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~ 165 (354)
+|...+..+|++|.+|..+.... ..... ...|+|++|++++++.++++|++++.++++.+ ..+.++|.+ .+..
T Consensus 74 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~~-~~~~ 151 (319)
T cd08242 74 RVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAALEI-LEQV 151 (319)
T ss_pred eEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHHHH-HHhc
Confidence 99999999999999997664321 11111 13589999999999999999999999888864 355566665 5778
Q ss_pred CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEE
Q 018529 166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE 245 (354)
Q Consensus 166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d 245 (354)
+++++++|||+|+|.+|.+++|+|+.+|+ +|++++.++++.++++++|++.++++.+. ...+++|++||
T Consensus 152 ~~~~g~~vlV~g~g~vg~~~~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~d~vid 220 (319)
T cd08242 152 PITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALARRLGVETVLPDEAE----------SEGGGFDVVVE 220 (319)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEeCcccc----------ccCCCCCEEEE
Confidence 89999999999989999999999999999 69999999999999999999887766431 12238999999
Q ss_pred cccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCce
Q 018529 246 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFI 324 (354)
Q Consensus 246 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 324 (354)
++|+...+..++++++++ |+++..+...... .+.... +.++.++.++..+ .++++++++.++++++.+.+
T Consensus 221 ~~g~~~~~~~~~~~l~~~-g~~v~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~~~~l~~~~~~ 291 (319)
T cd08242 221 ATGSPSGLELALRLVRPR-GTVVLKSTYAGPA--SFDLTKAVVNEITLVGSRCG------PFAPALRLLRKGLVDVDPLI 291 (319)
T ss_pred CCCChHHHHHHHHHhhcC-CEEEEEcccCCCC--ccCHHHheecceEEEEEecc------cHHHHHHHHHcCCCChhhce
Confidence 999877889999999997 9999876543222 222222 3477888876532 38889999999988766668
Q ss_pred eeeeccccHHHHHHHHhcCCceeEEEe
Q 018529 325 THRIPFSEINKAFEYMVKGEGLRCIIS 351 (354)
Q Consensus 325 ~~~~~l~~~~~a~~~~~~~~~~k~vi~ 351 (354)
.+.|+++++++||+.+.++..+|+||+
T Consensus 292 ~~~~~l~~~~~a~~~~~~~~~~k~vi~ 318 (319)
T cd08242 292 TAVYPLEEALEAFERAAEPGALKVLLR 318 (319)
T ss_pred EEEEeHHHHHHHHHHHhcCCceEEEeC
Confidence 899999999999999987766798875
No 62
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=1.4e-41 Score=308.89 Aligned_cols=311 Identities=20% Similarity=0.241 Sum_probs=247.8
Q ss_pred hcceeeeccCCC-ceEEEEeec----CCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccce--eEEEEEeCC
Q 018529 10 TCKAAVAWEAGK-PLIIQDVEV----APPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEA--AGVVESVGE 81 (354)
Q Consensus 10 ~~~a~~~~~~~~-~l~~~~~~~----p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~--~G~V~~vG~ 81 (354)
-+|++....++. .+++.+.++ |+|++|||||||+|+++|+.|+....|.... ..+|+++|+++ .|.+..+|+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~ 86 (338)
T cd08295 7 ILKAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDS 86 (338)
T ss_pred EEecCCCCCCCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEec
Confidence 356666444443 389999988 7899999999999999999999988774332 35678899754 456666888
Q ss_pred CCCCCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeec-cceEECC-CCCCcc-chhhcccchhhhh
Q 018529 82 GVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHS-GCVAKIN-PLAPLD-KVCILSCGVSTGL 158 (354)
Q Consensus 82 ~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~-~~~~~~P-~~~~~~-~aa~l~~~~~~a~ 158 (354)
.+++|++||+|+++ |+|+||+.+|+ ..++++| +.+++. +++++++++.|||
T Consensus 87 ~v~~~~vGd~V~~~--------------------------g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~ 140 (338)
T cd08295 87 GNPDFKVGDLVWGF--------------------------TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAY 140 (338)
T ss_pred CCCCCCCCCEEEec--------------------------CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHH
Confidence 88899999999854 58999999999 7999995 678886 7899999999999
Q ss_pred hhhhhhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCceEEcCCCCChhHHHHHHHHc
Q 018529 159 GATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMT 236 (354)
Q Consensus 159 ~~l~~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~i~~~~ 236 (354)
+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+++++ +|+++++++.+.. ++.+.+++.+
T Consensus 141 ~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~-~~~~~i~~~~ 218 (338)
T cd08295 141 AGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLKNKLGFDDAFNYKEEP-DLDAALKRYF 218 (338)
T ss_pred HHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCceeEEcCCcc-cHHHHHHHhC
Confidence 99878889999999999997 9999999999999999 79999999999999998 9999999865431 2777777776
Q ss_pred CCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCcee----ecc-hhhhccccEEEEEeccCCCC--CCCHHHH
Q 018529 237 NGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVF----MTK-PINVLNERTLKGTFFGNYKP--RTDLPSV 309 (354)
Q Consensus 237 ~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~----~~~-~~~~~~~~~i~g~~~~~~~~--~~~~~~~ 309 (354)
++++|++||++|+ ..+..++++++++ |+++.+|........ ... ...+.+++++.++....+.. .+.++++
T Consensus 219 ~~gvd~v~d~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~ 296 (338)
T cd08295 219 PNGIDIYFDNVGG-KMLDAVLLNMNLH-GRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEM 296 (338)
T ss_pred CCCcEEEEECCCH-HHHHHHHHHhccC-cEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHH
Confidence 5689999999998 7889999999997 999999865421110 011 12234777888865543221 1236778
Q ss_pred HHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529 310 VDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 352 (354)
Q Consensus 310 ~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~ 352 (354)
++++.++++++. +...|+++++++|++.+.+++. +|+|+++
T Consensus 297 ~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 297 SGYIKEGKLKYV--EDIADGLESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred HHHHHCCCeEce--eecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence 899999987765 4456999999999999988775 6988864
No 63
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=3.8e-41 Score=306.01 Aligned_cols=323 Identities=25% Similarity=0.412 Sum_probs=266.7
Q ss_pred ceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCE
Q 018529 12 KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDH 91 (354)
Q Consensus 12 ~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~ 91 (354)
|++..+..+..+++.+++.|+|.++|++||+.++++|++|+....+......+|.++|||++|+|+++|+++++|++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~ 80 (337)
T cd05283 1 KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDR 80 (337)
T ss_pred CceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCCCE
Confidence 57788888877999999999999999999999999999999998876544556889999999999999999999999999
Q ss_pred EE-ecccCCCCCCcccccCCCC-CCcc----------cccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhh
Q 018529 92 VL-PVFTGECGDCRHCRFSING-EPVN----------HFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLG 159 (354)
Q Consensus 92 V~-~~~~~~~~~c~~c~~~~~~-~~~~----------~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~ 159 (354)
|+ ......|++|.+|..+... +... +....|+|+||+.++++.++++|+++++++++.+.+.+.+||+
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~ 160 (337)
T cd05283 81 VGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYS 160 (337)
T ss_pred EEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHHHHH
Confidence 97 5556689999999754322 1111 1234689999999999999999999999999999999999999
Q ss_pred hhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCC
Q 018529 160 ATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGG 239 (354)
Q Consensus 160 ~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~ 239 (354)
++. ...+++|++++|.|+|.+|++++++|+.+|+ +|+++++++++.++++++|++.+++..+.+ +.+ . ..++
T Consensus 161 ~~~-~~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~--~~~---~-~~~~ 232 (337)
T cd05283 161 PLK-RNGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATKDPE--AMK---K-AAGS 232 (337)
T ss_pred HHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCcchh--hhh---h-ccCC
Confidence 864 4568999999998889999999999999999 899999999999999999998888765532 221 1 2348
Q ss_pred ccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHHHHHHHccCC
Q 018529 240 VDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQL 318 (354)
Q Consensus 240 ~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~ 318 (354)
+|++||++|.......++++++++ |+++.+|...... .++... +.+++++.+++.... ++++++++++.++++
T Consensus 233 ~d~v~~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~--~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~l 306 (337)
T cd05283 233 LDLIIDTVSASHDLDPYLSLLKPG-GTLVLVGAPEEPL--PVPPFPLIFGRKSVAGSLIGGR---KETQEMLDFAAEHGI 306 (337)
T ss_pred ceEEEECCCCcchHHHHHHHhcCC-CEEEEEeccCCCC--ccCHHHHhcCceEEEEecccCH---HHHHHHHHHHHhCCC
Confidence 999999999855689999999997 9999998764322 233333 348999999876432 578899999999976
Q ss_pred CCCCceeeeeccccHHHHHHHHhcCCc-eeEEEe
Q 018529 319 ELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 351 (354)
Q Consensus 319 ~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~ 351 (354)
++ . .+.|+++++++||+.+.+++. +|+|++
T Consensus 307 ~~--~-~~~~~~~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 307 KP--W-VEVIPMDGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred cc--c-eEEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence 54 3 378999999999999998886 688764
No 64
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=7.1e-41 Score=304.59 Aligned_cols=328 Identities=25% Similarity=0.368 Sum_probs=263.6
Q ss_pred cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018529 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90 (354)
Q Consensus 11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd 90 (354)
|||+++.+++....+++.|.|++.++||+|||.++++|++|+....+..+. ..|.++|||++|+|+++|++++.|++||
T Consensus 1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~~G~~v~~~~~Gd 79 (338)
T PRK09422 1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD-KTGRILGHEGIGIVKEVGPGVTSLKVGD 79 (338)
T ss_pred CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC-CCCccCCcccceEEEEECCCCccCCCCC
Confidence 789999998874448999999999999999999999999999888775432 2367899999999999999999999999
Q ss_pred EEEecc-cCCCCCCcccccCCC-CCCcc---cccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhc
Q 018529 91 HVLPVF-TGECGDCRHCRFSIN-GEPVN---HFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA 165 (354)
Q Consensus 91 ~V~~~~-~~~~~~c~~c~~~~~-~~~~~---~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~ 165 (354)
+|++.+ ..+|+.|.+|..+.. .|..+ +....|+|++|+.++.+.++++|+++++.+++.+++++.+||+++ ..+
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~-~~~ 158 (338)
T PRK09422 80 RVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAI-KVS 158 (338)
T ss_pred EEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHH-Hhc
Confidence 998654 457999999854322 22222 122358999999999999999999999999999999999999996 778
Q ss_pred CCCCCCeEEEEcCChhHHHHHHHHHH-cCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEE
Q 018529 166 KPERGSSVAVFGLGAVGLAAAEGARI-AGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV 244 (354)
Q Consensus 166 ~~~~~~~vlI~G~g~~G~~a~~~a~~-~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~ 244 (354)
.++++++|||+|+|++|++++++|+. .|+ +|+++++++++.++++++|++.++++...+ ++.+.+++.++ ++|+++
T Consensus 159 ~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~~v~~~~~-~~d~vi 235 (338)
T PRK09422 159 GIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSKRVE-DVAKIIQEKTG-GAHAAV 235 (338)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEecccccc-cHHHHHHHhcC-CCcEEE
Confidence 89999999999999999999999998 499 899999999999999999998888875411 26667777665 688665
Q ss_pred EcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchh-hhccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCc
Q 018529 245 ECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKF 323 (354)
Q Consensus 245 d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (354)
++.++...++.++++++.+ |+++.+|...... ..... ...+..++.++.... +++++.+++++.++++.. .
T Consensus 236 ~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~g~l~~--~ 307 (338)
T PRK09422 236 VTAVAKAAFNQAVDAVRAG-GRVVAVGLPPESM--DLSIPRLVLDGIEVVGSLVGT---RQDLEEAFQFGAEGKVVP--K 307 (338)
T ss_pred EeCCCHHHHHHHHHhccCC-CEEEEEeeCCCCc--eecHHHHhhcCcEEEEecCCC---HHHHHHHHHHHHhCCCCc--c
Confidence 5555668899999999997 9999998654222 22222 223677777755322 246888999999997654 3
Q ss_pred eeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529 324 ITHRIPFSEINKAFEYMVKGEG-LRCIISM 352 (354)
Q Consensus 324 v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~ 352 (354)
+ +.++++++++|++.+.+++. +|+++++
T Consensus 308 v-~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 336 (338)
T PRK09422 308 V-QLRPLEDINDIFDEMEQGKIQGRMVIDF 336 (338)
T ss_pred E-EEEcHHHHHHHHHHHHcCCccceEEEec
Confidence 4 46899999999999988776 5888765
No 65
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=3.9e-41 Score=305.78 Aligned_cols=325 Identities=24% Similarity=0.363 Sum_probs=268.4
Q ss_pred cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018529 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90 (354)
Q Consensus 11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd 90 (354)
|||+++.++++++++++.+.|.+.++|++||+.++++|++|+....+..+...+|.++|||++|+|+.+|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~ 80 (334)
T PRK13771 1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKPGD 80 (334)
T ss_pred CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCCCC
Confidence 78999999998899999999999999999999999999999988877655556678999999999999999998899999
Q ss_pred EEEecccCCCCCCcccccCCCC-CCcc---cccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcC
Q 018529 91 HVLPVFTGECGDCRHCRFSING-EPVN---HFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 166 (354)
Q Consensus 91 ~V~~~~~~~~~~c~~c~~~~~~-~~~~---~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~ 166 (354)
+|++.+..+|+.|.+|..+..+ |... +....|+|++|+.++.+.++++|+++++.+++.+++.+.++|+++... .
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~~~-~ 159 (334)
T PRK13771 81 RVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLRRA-G 159 (334)
T ss_pred EEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHHHhc-C
Confidence 9999988999999999755422 2221 112258999999999999999999999999999999999999987555 8
Q ss_pred CCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEE
Q 018529 167 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE 245 (354)
Q Consensus 167 ~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d 245 (354)
++++++|+|+|+ |.+|++++++|+..|+ +++++++++++.+.++++ ++.+++.. .+.+.++++ +++|++||
T Consensus 160 ~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~v~~~--~~~d~~ld 231 (334)
T PRK13771 160 VKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGS----KFSEEVKKI--GGADIVIE 231 (334)
T ss_pred CCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCch----hHHHHHHhc--CCCcEEEE
Confidence 999999999998 9999999999999999 889898999999999888 66666554 255566665 37999999
Q ss_pred cccChHhHHHHHHHhhCCCceEEEEcCCCCCce--eecchhhhccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCc
Q 018529 246 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV--FMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKF 323 (354)
Q Consensus 246 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~--~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (354)
++|+ .....++++++++ |+++.+|....... ..+... +.+++++.+... ..+++++++++++.++.++. .
T Consensus 232 ~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~--~ 303 (334)
T PRK13771 232 TVGT-PTLEESLRSLNMG-GKIIQIGNVDPSPTYSLRLGYI-ILKDIEIIGHIS---ATKRDVEEALKLVAEGKIKP--V 303 (334)
T ss_pred cCCh-HHHHHHHHHHhcC-CEEEEEeccCCCCCcccCHHHH-HhcccEEEEecC---CCHHHHHHHHHHHHcCCCcc--e
Confidence 9998 5788999999997 99999987543222 112222 347888887642 23457889999999997653 3
Q ss_pred eeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529 324 ITHRIPFSEINKAFEYMVKGEG-LRCIISM 352 (354)
Q Consensus 324 v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~ 352 (354)
+.+.|+++++++||+.+.+++. +|+++..
T Consensus 304 ~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 304 IGAEVSLSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred EeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence 6789999999999999987664 6888764
No 66
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1e-40 Score=303.96 Aligned_cols=328 Identities=29% Similarity=0.481 Sum_probs=265.0
Q ss_pred eeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCC-CC--CCCCcccccceeEEEEEeCCCCCCCCCC
Q 018529 13 AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG-QT--PLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (354)
Q Consensus 13 a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~-~~--~~~p~~~G~e~~G~V~~vG~~~~~~~~G 89 (354)
|.++++++. +++.+.+.|.+.++||+|||.++++|+.|+..+.+.. .. ...|.++|+|++|+|+++|+++++|++|
T Consensus 1 ~~~~~~~~~-~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (343)
T cd05285 1 AAVLHGPGD-LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVG 79 (343)
T ss_pred CceEecCCc-eeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCC
Confidence 456777755 9999999999999999999999999999988764321 11 1346789999999999999999999999
Q ss_pred CEEEecccCCCCCCcccccCCCCCCcc-cc----cccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhh
Q 018529 90 DHVLPVFTGECGDCRHCRFSINGEPVN-HF----LGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV 164 (354)
Q Consensus 90 d~V~~~~~~~~~~c~~c~~~~~~~~~~-~~----~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~ 164 (354)
|+|++.+..+|++|.+|..+..+.+.. .+ ...|+|++|+.++++.++++|+++++++++.+ .++.+||+++ ..
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~-~~ 157 (343)
T cd05285 80 DRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC-RR 157 (343)
T ss_pred CEEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-Hh
Confidence 999999999999999997654332111 11 13589999999999999999999999999877 5888999985 78
Q ss_pred cCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCC-hhHHHHHHHHcCC-CccE
Q 018529 165 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD-RPIQEVIAEMTNG-GVDR 242 (354)
Q Consensus 165 ~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~-~~~~~~i~~~~~~-~~dv 242 (354)
++++++++|||+|+|.+|++++|+|+.+|++.|+++++++++.++++++|++.++++.+.+ ..+.+.+.+.+.+ ++|+
T Consensus 158 ~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~d~ 237 (343)
T cd05285 158 AGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGKGPDV 237 (343)
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEeccccccchhHHHHHHHHhCCCCCCE
Confidence 9999999999998899999999999999995489999999999999999999998877654 1136677777776 8999
Q ss_pred EEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchh-hhccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCC
Q 018529 243 SVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELE 321 (354)
Q Consensus 243 v~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (354)
+|||.|+...+..++++++++ |+++.+|..... ..++.. ...+++++.++... .+.+.++++++.++++.+.
T Consensus 238 vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~l~~~ 310 (343)
T cd05285 238 VIECTGAESCIQTAIYATRPG-GTVVLVGMGKPE--VTLPLSAASLREIDIRGVFRY----ANTYPTAIELLASGKVDVK 310 (343)
T ss_pred EEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCC--CccCHHHHhhCCcEEEEeccC----hHHHHHHHHHHHcCCCCch
Confidence 999999866889999999997 999999865422 122221 23367777765432 2568889999999977654
Q ss_pred CceeeeeccccHHHHHHHHhcCC-c-eeEEE
Q 018529 322 KFITHRIPFSEINKAFEYMVKGE-G-LRCII 350 (354)
Q Consensus 322 ~~v~~~~~l~~~~~a~~~~~~~~-~-~k~vi 350 (354)
+.+.+.|+++++.+|++.+.+++ . +|++|
T Consensus 311 ~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~ 341 (343)
T cd05285 311 PLITHRFPLEDAVEAFETAAKGKKGVIKVVI 341 (343)
T ss_pred HhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence 55678899999999999998875 3 78887
No 67
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=1.3e-40 Score=302.93 Aligned_cols=330 Identities=28% Similarity=0.419 Sum_probs=273.8
Q ss_pred cceeeeccCCCc-eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCC-CCCCCcccccceeEEEEEeCCCCCCCCC
Q 018529 11 CKAAVAWEAGKP-LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEV 88 (354)
Q Consensus 11 ~~a~~~~~~~~~-l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 88 (354)
||++++..++++ +.+.+.+.|.+++++|+|++.++++|+.|+....+..+ ....|.++|+|++|+|+.+|++++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~~ 80 (338)
T cd08254 1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKV 80 (338)
T ss_pred CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCCC
Confidence 799999999987 67888888889999999999999999999998877554 2345788999999999999999999999
Q ss_pred CCEEEecccCCCCCCcccccCCCCCC----cccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhh
Q 018529 89 GDHVLPVFTGECGDCRHCRFSINGEP----VNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV 164 (354)
Q Consensus 89 Gd~V~~~~~~~~~~c~~c~~~~~~~~----~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~ 164 (354)
||+|++.+..+|+.|.+|..+..... ..+....|+|++|+.++.+.++++|+++++.+++.++.++++||+++...
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l~~~ 160 (338)
T cd08254 81 GDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRA 160 (338)
T ss_pred CCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHHhc
Confidence 99999999999999999965543211 11233458999999999999999999999999999999999999998778
Q ss_pred cCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEE
Q 018529 165 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRS 243 (354)
Q Consensus 165 ~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv 243 (354)
..++++++|||.|+|.+|++++++|+..|. +|+++++++++.+.++++|++.+++..+.. +.+.+ ....+ ++|++
T Consensus 161 ~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~~~~~--~~~~~-~~~~~~~~D~v 236 (338)
T cd08254 161 GEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSLDDS--PKDKK-AAGLGGGFDVI 236 (338)
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCCCcC--HHHHH-HHhcCCCceEE
Confidence 889999999999889999999999999999 799999999999999999998888776544 55555 44444 89999
Q ss_pred EEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCc
Q 018529 244 VECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKF 323 (354)
Q Consensus 244 ~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (354)
+|++|....++.++++|+++ |+++.++.......+.. ...+.++.++.+++.. ..+.+..+++++.++.+.+.
T Consensus 237 id~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~ll~~~~l~~~-- 309 (338)
T cd08254 237 FDFVGTQPTFEDAQKAVKPG-GRIVVVGLGRDKLTVDL-SDLIARELRIIGSFGG---TPEDLPEVLDLIAKGKLDPQ-- 309 (338)
T ss_pred EECCCCHHHHHHHHHHhhcC-CEEEEECCCCCCCccCH-HHHhhCccEEEEeccC---CHHHHHHHHHHHHcCCCccc--
Confidence 99998878899999999997 99999986543222222 1223377788876532 23568889999999977754
Q ss_pred eeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529 324 ITHRIPFSEINKAFEYMVKGEG-LRCIISM 352 (354)
Q Consensus 324 v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~ 352 (354)
.+.++++++.++++.+.+++. +|+|+++
T Consensus 310 -~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 310 -VETRPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred -ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 478999999999999988775 5888764
No 68
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=1.8e-40 Score=302.18 Aligned_cols=332 Identities=30% Similarity=0.419 Sum_probs=265.7
Q ss_pred cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCC---CCCCCCcccccceeEEEEEeCCCCCCCC
Q 018529 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG---QTPLFPRIFGHEAAGVVESVGEGVSDLE 87 (354)
Q Consensus 11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~---~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 87 (354)
|||++++.++..+++.+.+.|.|.++|++||+.++++|+.|+..+.+.. ....+|.++|||++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~ 80 (341)
T cd05281 1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVK 80 (341)
T ss_pred CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCC
Confidence 6899999888779999999999999999999999999999988754421 2234577899999999999999999999
Q ss_pred CCCEEEecccCCCCCCcccccCCCCC----CcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhh
Q 018529 88 VGDHVLPVFTGECGDCRHCRFSINGE----PVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN 163 (354)
Q Consensus 88 ~Gd~V~~~~~~~~~~c~~c~~~~~~~----~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~ 163 (354)
+||+|++.+..+|+.|.+|..+.... ...+....|+|++|++++.+.++++|++++++. +++..++.++++++.
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~lP~~~~~~~-a~~~~~~~~a~~~~~- 158 (341)
T cd05281 81 VGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKNDKDIPPEI-ASIQEPLGNAVHTVL- 158 (341)
T ss_pred CCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHHcEECcCCCCHHH-hhhhhHHHHHHHHHH-
Confidence 99999999999999999986443221 111122458999999999999999999999854 456667888888753
Q ss_pred hcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccE
Q 018529 164 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDR 242 (354)
Q Consensus 164 ~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dv 242 (354)
...++|++|||.|+|.+|++++|+|+..|..+|+++++++++.+.++++|+++++++.+.+ +. .+.++..+ ++|+
T Consensus 159 -~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~-~~~~~~~~~~vd~ 234 (341)
T cd05281 159 -AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPREED--VV-EVKSVTDGTGVDV 234 (341)
T ss_pred -hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCccccc--HH-HHHHHcCCCCCCE
Confidence 4568999999998899999999999999986688888899999999999998888776554 66 77777776 9999
Q ss_pred EEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCC
Q 018529 243 SVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEK 322 (354)
Q Consensus 243 v~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (354)
+||++|+......++++|+++ |+++.+|.........+......+++.+.+... ....+.+.++++++.++.+.+.+
T Consensus 235 vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~ 311 (341)
T cd05281 235 VLEMSGNPKAIEQGLKALTPG-GRVSILGLPPGPVDIDLNNLVIFKGLTVQGITG--RKMFETWYQVSALLKSGKVDLSP 311 (341)
T ss_pred EEECCCCHHHHHHHHHHhccC-CEEEEEccCCCCcccccchhhhccceEEEEEec--CCcchhHHHHHHHHHcCCCChhH
Confidence 999999877889999999997 999999865432222222223446777776552 12234678899999999887655
Q ss_pred ceeeeeccccHHHHHHHHhcCCceeEEEe
Q 018529 323 FITHRIPFSEINKAFEYMVKGEGLRCIIS 351 (354)
Q Consensus 323 ~v~~~~~l~~~~~a~~~~~~~~~~k~vi~ 351 (354)
.+...++++++++||+.+.+++.+|+|++
T Consensus 312 ~~~~~~~~~~~~~a~~~~~~~~~gk~vv~ 340 (341)
T cd05281 312 VITHKLPLEDFEEAFELMRSGKCGKVVLY 340 (341)
T ss_pred heEEEecHHHHHHHHHHHhcCCCceEEec
Confidence 57788999999999999988775688875
No 69
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=3.7e-40 Score=300.42 Aligned_cols=332 Identities=29% Similarity=0.452 Sum_probs=269.8
Q ss_pred cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018529 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90 (354)
Q Consensus 11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd 90 (354)
|||+++.+.++ +++++.+.|+++++||+||+.++++|+.|+....+.. ....|.++|+|++|+|+.+|++++.|++||
T Consensus 1 ~~a~~~~~~~~-l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~-~~~~~~~~g~~~~G~V~~~g~~v~~~~~Gd 78 (343)
T cd08236 1 MKALVLTGPGD-LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTG-AYHPPLVLGHEFSGTVEEVGSGVDDLAVGD 78 (343)
T ss_pred CeeEEEecCCc-eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCC-CCCCCcccCcceEEEEEEECCCCCcCCCCC
Confidence 78999998876 9999999999999999999999999999998877654 234578899999999999999999999999
Q ss_pred EEEecccCCCCCCcccccCCCCCC----cccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcC
Q 018529 91 HVLPVFTGECGDCRHCRFSINGEP----VNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 166 (354)
Q Consensus 91 ~V~~~~~~~~~~c~~c~~~~~~~~----~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~ 166 (354)
+|++.+...|++|.+|..+..+.+ ..+....|+|++|+.+|++.++++|+++++++++++ ..+++||+++. ...
T Consensus 79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l~-~~~ 156 (343)
T cd08236 79 RVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALHAVR-LAG 156 (343)
T ss_pred EEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHHHHHHHH-hcC
Confidence 999999999999999976654322 122224589999999999999999999999999888 58889999874 778
Q ss_pred CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEEE
Q 018529 167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVE 245 (354)
Q Consensus 167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d 245 (354)
++++++|||+|+|.+|.+++|+|+.+|++.|+++++++++.++++++|++.++++.+.. .+++.+..++ ++|++||
T Consensus 157 ~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~~~---~~~~~~~~~~~~~d~vld 233 (343)
T cd08236 157 ITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKEED---VEKVRELTEGRGADLVIE 233 (343)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcccc---HHHHHHHhCCCCCCEEEE
Confidence 99999999998899999999999999995599999999999999999998888876542 4556666666 7999999
Q ss_pred cccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecc-h-hhhccccEEEEEeccCCC--CCCCHHHHHHHHHccCCCCC
Q 018529 246 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-P-INVLNERTLKGTFFGNYK--PRTDLPSVVDMYMNKQLELE 321 (354)
Q Consensus 246 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~-~-~~~~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 321 (354)
|.|....+..++++|+++ |+++.+|........... . ..+.++.++.++...... .++.++++++++.++++.+.
T Consensus 234 ~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 312 (343)
T cd08236 234 AAGSPATIEQALALARPG-GKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKIKVE 312 (343)
T ss_pred CCCCHHHHHHHHHHhhcC-CEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHHHHcCCCChH
Confidence 998867889999999997 999999865432111111 1 112478888887653221 13568889999999987644
Q ss_pred CceeeeeccccHHHHHHHHhc-CCc-eeEEE
Q 018529 322 KFITHRIPFSEINKAFEYMVK-GEG-LRCII 350 (354)
Q Consensus 322 ~~v~~~~~l~~~~~a~~~~~~-~~~-~k~vi 350 (354)
+.+.+.+++++++++++.+.+ ++. +|+|+
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 313 PLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred HheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 446788999999999999988 444 57664
No 70
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=2.4e-40 Score=301.88 Aligned_cols=299 Identities=18% Similarity=0.228 Sum_probs=231.7
Q ss_pred eEEEEeecCCC-CCCeEEEEEeeeecCccchhhhc---cCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEecccC
Q 018529 23 LIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWE---SKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTG 98 (354)
Q Consensus 23 l~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~---~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~ 98 (354)
+++.+.+.|+| ++|||||||.|+|||+.|..... +......+|.++|||++|+|+++|+++++|++||+|++.
T Consensus 23 ~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~--- 99 (345)
T cd08293 23 FRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSF--- 99 (345)
T ss_pred eEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEec---
Confidence 88899999987 49999999999999999864322 111123467899999999999999999999999999853
Q ss_pred CCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccc----hhhcccchhhhhhhhhhhcCCCCC--Ce
Q 018529 99 ECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK----VCILSCGVSTGLGATLNVAKPERG--SS 172 (354)
Q Consensus 99 ~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~----aa~l~~~~~~a~~~l~~~~~~~~~--~~ 172 (354)
+ ++|+||+.++++.++++|+++++.+ ++.++.++.+||+++.+.+++++| ++
T Consensus 100 ---------------------~-~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~ 157 (345)
T cd08293 100 ---------------------N-WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQT 157 (345)
T ss_pred ---------------------C-CCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCE
Confidence 1 4799999999999999999865433 445677899999998778888877 99
Q ss_pred EEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccCh
Q 018529 173 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI 250 (354)
Q Consensus 173 vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~ 250 (354)
|||+|+ |++|++++|+|+++|+.+|+++++++++.+++++ +|++.++++.+.+ +.+.+++++++++|++||++|+
T Consensus 158 VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~--~~~~i~~~~~~gvd~vid~~g~- 234 (345)
T cd08293 158 MVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDN--VAERLRELCPEGVDVYFDNVGG- 234 (345)
T ss_pred EEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCC--HHHHHHHHCCCCceEEEECCCc-
Confidence 999987 9999999999999998679999999999999876 9999999887755 8888888876689999999998
Q ss_pred HhHHHHHHHhhCCCceEEEEcCCCC---Ccee--ecc--hhhhc--cccEEEEEeccCCCC--CCCHHHHHHHHHccCCC
Q 018529 251 DNMISAFECVHDGWGVAVLVGVPSK---DAVF--MTK--PINVL--NERTLKGTFFGNYKP--RTDLPSVVDMYMNKQLE 319 (354)
Q Consensus 251 ~~~~~~~~~l~~~~g~~v~~g~~~~---~~~~--~~~--~~~~~--~~~~i~g~~~~~~~~--~~~~~~~~~~~~~~~~~ 319 (354)
..+..++++++++ |+++.+|.... +... ... ...+. +++++.++....+.. .+.++++++++.+++++
T Consensus 235 ~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~ 313 (345)
T cd08293 235 EISDTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEGKLK 313 (345)
T ss_pred HHHHHHHHHhccC-CEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCCCcc
Confidence 4679999999997 99999985321 0010 111 01112 333433332211111 12356778899999877
Q ss_pred CCCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529 320 LEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 352 (354)
Q Consensus 320 ~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~ 352 (354)
+. ....++++++++|++.+.+++. +|+|+++
T Consensus 314 ~~--~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 314 VK--ETVYEGLENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred ce--eEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence 65 3455699999999999988775 6998864
No 71
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=1.1e-40 Score=302.24 Aligned_cols=304 Identities=22% Similarity=0.266 Sum_probs=244.6
Q ss_pred hcceeeeccC--CCc----eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCC
Q 018529 10 TCKAAVAWEA--GKP----LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGV 83 (354)
Q Consensus 10 ~~~a~~~~~~--~~~----l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 83 (354)
+|||+++.++ +.+ +++.+.+.|+|++|||+|||.++++|+.|..... ....+|.++|+|++|+|++ .+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~---~~~~~p~v~G~e~~G~V~~---~~ 75 (329)
T cd08294 2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSK---RLNEGDTMIGTQVAKVIES---KN 75 (329)
T ss_pred CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhcccc---cCCCCCcEecceEEEEEec---CC
Confidence 6899999883 333 8899999999999999999999999988755221 1124588999999999985 44
Q ss_pred CCCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeecc---ceEECCCCCC--c---cchhhcccchh
Q 018529 84 SDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSG---CVAKINPLAP--L---DKVCILSCGVS 155 (354)
Q Consensus 84 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~---~~~~~P~~~~--~---~~aa~l~~~~~ 155 (354)
++|++||+|++. ++|++|+.++.+ .++++|++++ + ..+++++++++
T Consensus 76 ~~~~~Gd~V~~~--------------------------~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ 129 (329)
T cd08294 76 SKFPVGTIVVAS--------------------------FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGL 129 (329)
T ss_pred CCCCCCCEEEee--------------------------CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHH
Confidence 679999999853 478999999999 9999999998 2 23346788999
Q ss_pred hhhhhhhhhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHH
Q 018529 156 TGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAE 234 (354)
Q Consensus 156 ~a~~~l~~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~ 234 (354)
|||+++.+..++++|++|||+|+ |++|.+++|+|+.+|+ +|+++++++++.++++++|++.++++.+.+ +.+.+++
T Consensus 130 ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~--~~~~v~~ 206 (329)
T cd08294 130 TAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVAWLKELGFDAVFNYKTVS--LEEALKE 206 (329)
T ss_pred HHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCCcc--HHHHHHH
Confidence 99999878899999999999986 9999999999999999 899999999999999999999999987665 7788888
Q ss_pred HcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCce--e---e-cchhhhccccEEEEEeccCCCC--CCCH
Q 018529 235 MTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV--F---M-TKPINVLNERTLKGTFFGNYKP--RTDL 306 (354)
Q Consensus 235 ~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~--~---~-~~~~~~~~~~~i~g~~~~~~~~--~~~~ 306 (354)
++++++|++||++|+ ..+..++++++++ |+++.+|....... . . +....+.+++++.+++...+.. .+.+
T Consensus 207 ~~~~gvd~vld~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 284 (329)
T cd08294 207 AAPDGIDCYFDNVGG-EFSSTVLSHMNDF-GRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEAL 284 (329)
T ss_pred HCCCCcEEEEECCCH-HHHHHHHHhhccC-CEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHH
Confidence 776689999999998 7889999999997 99999985421110 0 1 1112244788888876543311 1236
Q ss_pred HHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529 307 PSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 352 (354)
Q Consensus 307 ~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~ 352 (354)
+++++++.++++++. ....|+++++++|++.+.+++. +|+|+++
T Consensus 285 ~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 285 KQLLKWIKEGKLKYR--EHVTEGFENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred HHHHHHHHCCCCcCC--cccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 678899999988765 3356899999999999988775 6888864
No 72
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=4.2e-40 Score=299.58 Aligned_cols=324 Identities=26% Similarity=0.405 Sum_probs=258.1
Q ss_pred eeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhc-cCCC--CCCCCcccccceeEEEEEeCCCCCCCCCCCE
Q 018529 15 VAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE-SKGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDH 91 (354)
Q Consensus 15 ~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~-~~~~--~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~ 91 (354)
++++.+. +++.+.++|.++++||+||+.++++|++|+.... +... ...+|.++|+|++|+|+++|+++++|++||+
T Consensus 2 ~~~~~~~-~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~ 80 (339)
T cd08232 2 VIHAAGD-LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQR 80 (339)
T ss_pred eeccCCc-eEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCE
Confidence 3556665 9999999999999999999999999999988763 2221 1235778999999999999999999999999
Q ss_pred EEecccCCCCCCcccccCCCC-CCccccc--------ccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhh
Q 018529 92 VLPVFTGECGDCRHCRFSING-EPVNHFL--------GTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL 162 (354)
Q Consensus 92 V~~~~~~~~~~c~~c~~~~~~-~~~~~~~--------~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~ 162 (354)
|++.+..+|++|.+|..+... +....+. ..|+|++|+.++++.++++|+++++++|+. ..+++++|+++.
T Consensus 81 V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~ 159 (339)
T cd08232 81 VAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVN 159 (339)
T ss_pred EEEccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHHHH
Confidence 999999999999999766543 2221111 358999999999999999999999999876 568889999876
Q ss_pred hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccE
Q 018529 163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDR 242 (354)
Q Consensus 163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dv 242 (354)
+...+ ++++|||.|+|.+|.+++|+|+.+|+.+|+++++++++.++++++|++.++++++.+ +.+ +. ...+++|+
T Consensus 160 ~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~~--~~~-~~-~~~~~vd~ 234 (339)
T cd08232 160 RAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARDP--LAA-YA-ADKGDFDV 234 (339)
T ss_pred hcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCchh--hhh-hh-ccCCCccE
Confidence 55556 999999998899999999999999986789998999999999999998888876543 211 11 11236999
Q ss_pred EEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCC
Q 018529 243 SVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELE 321 (354)
Q Consensus 243 v~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (354)
+||+.|+...++.++++|+++ |+++.++..... ....... +.+++++.+... ..+.++++++++.++.+.+.
T Consensus 235 vld~~g~~~~~~~~~~~L~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~ 307 (339)
T cd08232 235 VFEASGAPAALASALRVVRPG-GTVVQVGMLGGP--VPLPLNALVAKELDLRGSFR----FDDEFAEAVRLLAAGRIDVR 307 (339)
T ss_pred EEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCC--ccCcHHHHhhcceEEEEEec----CHHHHHHHHHHHHcCCCCch
Confidence 999999767889999999997 999999864421 2222222 347778877652 23468889999999988766
Q ss_pred CceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529 322 KFITHRIPFSEINKAFEYMVKGEG-LRCIISM 352 (354)
Q Consensus 322 ~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~ 352 (354)
+.+.++|+++++++|++.+.+++. +|+|+++
T Consensus 308 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 308 PLITAVFPLEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred hheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence 667889999999999999987664 6888763
No 73
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=1e-40 Score=276.24 Aligned_cols=319 Identities=23% Similarity=0.349 Sum_probs=259.8
Q ss_pred ccchhcceeeeccCCCc---eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCC
Q 018529 6 GLILTCKAAVAWEAGKP---LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGE 81 (354)
Q Consensus 6 ~~~~~~~a~~~~~~~~~---l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~ 81 (354)
-+|...|++++.+.+.| +++++.++|....++|+||.+|+.||++|+-.++|.++- +.+|.+-|.|++|.|+.+|+
T Consensus 15 q~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vGs 94 (354)
T KOG0025|consen 15 QMPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVGS 94 (354)
T ss_pred ccccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEecC
Confidence 36777899999999988 889999999987778999999999999999999999876 56799999999999999999
Q ss_pred CCCCCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhh
Q 018529 82 GVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGAT 161 (354)
Q Consensus 82 ~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l 161 (354)
++++|++||+|+... .+.|+|++|.+.+++.++++++.++++.||++..+.+|||..|
T Consensus 95 ~vkgfk~Gd~VIp~~----------------------a~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL 152 (354)
T KOG0025|consen 95 NVKGFKPGDWVIPLS----------------------ANLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRML 152 (354)
T ss_pred CcCccCCCCeEeecC----------------------CCCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHH
Confidence 999999999999763 3569999999999999999999999999999999999999999
Q ss_pred hhhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHH----HHhcCCceEEcCCCCC-hhHHHHHHHH
Q 018529 162 LNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE----AKKFGVTDFVNTSEHD-RPIQEVIAEM 235 (354)
Q Consensus 162 ~~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~----~~~lg~~~v~~~~~~~-~~~~~~i~~~ 235 (354)
.+...+++||+|+=.|+ +++|.+.+|+|+++|+ +-+.+.|+....+. ++.+|+++|+-.++-. ........
T Consensus 153 ~dfv~L~~GD~vIQNganS~VG~~ViQlaka~Gi-ktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~~k~~~-- 229 (354)
T KOG0025|consen 153 KDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGI-KTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKMKKFKG-- 229 (354)
T ss_pred HHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCc-ceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhhhhhhc--
Confidence 89999999999988998 9999999999999999 66666677655444 4669999998544322 11111111
Q ss_pred cCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCCC--------CHH
Q 018529 236 TNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRT--------DLP 307 (354)
Q Consensus 236 ~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~--------~~~ 307 (354)
....+...|||+|+ .......+.|..+ |.++.+|..+...........++|+++++|+|+..|...+ .+.
T Consensus 230 ~~~~prLalNcVGG-ksa~~iar~L~~G-gtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~ 307 (354)
T KOG0025|consen 230 DNPRPRLALNCVGG-KSATEIARYLERG-GTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMID 307 (354)
T ss_pred cCCCceEEEeccCc-hhHHHHHHHHhcC-ceEEEecCccCCCcccccchheeccceeeeeeeeehhhccCCcHHHHHHHH
Confidence 12378999999999 6777888999997 9999999887543333333346699999999998886532 356
Q ss_pred HHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCC--ceeEEEecC
Q 018529 308 SVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE--GLRCIISME 353 (354)
Q Consensus 308 ~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~--~~k~vi~~~ 353 (354)
++.+++..|++.... ....+|++...|++...+.. .+|.+|.++
T Consensus 308 ~~~~l~~~G~i~~~~--~e~v~L~~~~tald~~L~~~~~~~Kq~i~~e 353 (354)
T KOG0025|consen 308 ELCDLYRRGKLKAPN--CEKVPLADHKTALDAALSKFGKSGKQIIVLE 353 (354)
T ss_pred HHHHHHHcCeecccc--ceeeechhhhHHHHHHHHHhccCCceEEEec
Confidence 788899999876553 35679999999988654433 357777764
No 74
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=8.2e-40 Score=297.67 Aligned_cols=328 Identities=29% Similarity=0.413 Sum_probs=262.9
Q ss_pred ccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCC---CCCCCCcccccceeEEEEEeCCCCCCCCCCCEEE
Q 018529 17 WEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG---QTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVL 93 (354)
Q Consensus 17 ~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~---~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~ 93 (354)
++++.++++.+.|.|.|+++|++||+.++++|+.|+..+.+.. ....+|.++|+|++|+|+++|+++++|++||+|+
T Consensus 5 ~~~~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~ 84 (340)
T TIGR00692 5 TKPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVS 84 (340)
T ss_pred ccCCCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEE
Confidence 4677889999999999999999999999999999998765431 1123567899999999999999999999999999
Q ss_pred ecccCCCCCCcccccCCCC---CC-cccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCCCC
Q 018529 94 PVFTGECGDCRHCRFSING---EP-VNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER 169 (354)
Q Consensus 94 ~~~~~~~~~c~~c~~~~~~---~~-~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~ 169 (354)
+.+.+.|+.|..|..+... .. .++....|+|++|+.++++.++++|+++++.++ +++.++.++++++ ....++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~--~~~~~~ 161 (340)
T TIGR00692 85 VETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTV--LAGPIS 161 (340)
T ss_pred ECCcCCCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHH--HccCCC
Confidence 9999999999988544322 11 111224689999999999999999999998654 5667888898875 345789
Q ss_pred CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEEEccc
Q 018529 170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG 248 (354)
Q Consensus 170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d~~g 248 (354)
|++|+|.|+|++|.+++|+|+.+|++.|+++++++++.+.++++|++.++++.+.+ +.+.+.+++++ ++|++||+.|
T Consensus 162 g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~--~~~~l~~~~~~~~~d~vld~~g 239 (340)
T TIGR00692 162 GKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFKED--VVKEVADLTDGEGVDVFLEMSG 239 (340)
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccccC--HHHHHHHhcCCCCCCEEEECCC
Confidence 99999988899999999999999995588888899999999999998888876654 77888887766 8999999998
Q ss_pred ChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCceeeee
Q 018529 249 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRI 328 (354)
Q Consensus 249 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 328 (354)
+...+..++++++++ |+++.+|.........+....+.+++++.+... ....+.+.++++++.++++.+.+.+.+.+
T Consensus 240 ~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 316 (340)
T TIGR00692 240 APKALEQGLQAVTPG-GRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITG--RHMFETWYTVSRLIQSGKLDLDPIITHKF 316 (340)
T ss_pred CHHHHHHHHHhhcCC-CEEEEEccCCCCcccchhhhhhhcceEEEEEec--CCchhhHHHHHHHHHcCCCChHHheeeee
Confidence 777889999999997 999999875322222222122346777776542 12224578899999999887555577899
Q ss_pred ccccHHHHHHHHhcCCceeEEEec
Q 018529 329 PFSEINKAFEYMVKGEGLRCIISM 352 (354)
Q Consensus 329 ~l~~~~~a~~~~~~~~~~k~vi~~ 352 (354)
+++++.++++.+.+++.+|+|+++
T Consensus 317 ~l~~~~~a~~~~~~~~~gkvvv~~ 340 (340)
T TIGR00692 317 KFDKFEKGFELMRSGQTGKVILSL 340 (340)
T ss_pred eHHHHHHHHHHHhcCCCceEEEeC
Confidence 999999999999877767888864
No 75
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=2.9e-41 Score=298.53 Aligned_cols=258 Identities=26% Similarity=0.402 Sum_probs=213.5
Q ss_pred ccccceeEEEEEeCCCCC------CCCCCCEEEecccCCCCCCcccccCCCC-CCcccc----------cccccceeeEE
Q 018529 67 IFGHEAAGVVESVGEGVS------DLEVGDHVLPVFTGECGDCRHCRFSING-EPVNHF----------LGTSTFSEYTV 129 (354)
Q Consensus 67 ~~G~e~~G~V~~vG~~~~------~~~~Gd~V~~~~~~~~~~c~~c~~~~~~-~~~~~~----------~~~g~~a~~~~ 129 (354)
++|||++|+|+++|++++ +|++||||++.+..+|++|.+|+.+... |..... ...|+|+||+.
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~ 80 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH 80 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence 589999999999999999 8999999999999999999999876432 222211 13599999999
Q ss_pred eecc-ceEECCCCCCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHH
Q 018529 130 VHSG-CVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE 208 (354)
Q Consensus 130 v~~~-~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~ 208 (354)
+|++ .++++|+++++++++.+++.+.|+|+++ +.....++++|||+|+|++|++++|+|+.+|+++|++++++++|.+
T Consensus 81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~ 159 (280)
T TIGR03366 81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAAL-EAAGDLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRRE 159 (280)
T ss_pred ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHH-HhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence 9998 7999999999999999999999999986 4456679999999999999999999999999966999999999999
Q ss_pred HHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-h
Q 018529 209 EAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-V 286 (354)
Q Consensus 209 ~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~ 286 (354)
+++++|++.+++..+ ..+.+++++.+ ++|++||++|.+..+..++++++++ |+++.+|.........+.... +
T Consensus 160 ~a~~~Ga~~~i~~~~----~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~i~~~~~~ 234 (280)
T TIGR03366 160 LALSFGATALAEPEV----LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAGSVFPGGPVALDPEQVV 234 (280)
T ss_pred HHHHcCCcEecCchh----hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEeccCCCCCceeeCHHHHH
Confidence 999999998887643 33456666666 8999999999888899999999997 999999975422233333333 3
Q ss_pred ccccEEEEEeccCCCCCCCHHHHHHHHHcc--CCCCCCceeeeeccccH
Q 018529 287 LNERTLKGTFFGNYKPRTDLPSVVDMYMNK--QLELEKFITHRIPFSEI 333 (354)
Q Consensus 287 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~l~~~ 333 (354)
.+++++.|+.... .++++++++++.++ ++.+.++++++|||+|+
T Consensus 235 ~~~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 235 RRWLTIRGVHNYE---PRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred hCCcEEEecCCCC---HHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 4899999976432 35799999999984 56677889999999874
No 76
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=2.3e-40 Score=299.47 Aligned_cols=290 Identities=19% Similarity=0.243 Sum_probs=235.5
Q ss_pred eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEecccCCCCC
Q 018529 23 LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGD 102 (354)
Q Consensus 23 l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~ 102 (354)
+++.+.+.|+|++|||||||.|+|+|+.|.. |.......|.++|.|++|+|+++|+ +|++||+|++.
T Consensus 19 l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~------- 85 (325)
T TIGR02825 19 FELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKRLKEGDTMMGQQVARVVESKNV---ALPKGTIVLAS------- 85 (325)
T ss_pred eEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCcCCCCCcEecceEEEEEEeCCC---CCCCCCEEEEe-------
Confidence 8889999999999999999999999997654 3222233478999999999999874 59999999854
Q ss_pred CcccccCCCCCCcccccccccceeeEEeeccceEEC----CCCCCccch-hhcccchhhhhhhhhhhcCCCCCCeEEEEc
Q 018529 103 CRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI----NPLAPLDKV-CILSCGVSTGLGATLNVAKPERGSSVAVFG 177 (354)
Q Consensus 103 c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~----P~~~~~~~a-a~l~~~~~~a~~~l~~~~~~~~~~~vlI~G 177 (354)
++|++|+.++.+.+.++ |+++++++| +++++++.|||+++.+.+++++|++|||+|
T Consensus 86 -------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~g 146 (325)
T TIGR02825 86 -------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNA 146 (325)
T ss_pred -------------------cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeC
Confidence 36999999999988887 899999997 678999999999988889999999999998
Q ss_pred C-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccChHhHHHH
Q 018529 178 L-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISA 256 (354)
Q Consensus 178 ~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~ 256 (354)
+ |++|.+++|+|+..|+ +|+++++++++.++++++|++.++++.+.+ .+.+.++..+++++|++||++|+ ..+..+
T Consensus 147 a~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~-~~~~~~~~~~~~gvdvv~d~~G~-~~~~~~ 223 (325)
T TIGR02825 147 AAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKTVK-SLEETLKKASPDGYDCYFDNVGG-EFSNTV 223 (325)
T ss_pred CccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeccccc-cHHHHHHHhCCCCeEEEEECCCH-HHHHHH
Confidence 6 9999999999999999 899999999999999999999999887642 25566666665589999999998 577999
Q ss_pred HHHhhCCCceEEEEcCCCCC---ceee---cchhhhccccEEEEEeccCCCC---CCCHHHHHHHHHccCCCCCCceeee
Q 018529 257 FECVHDGWGVAVLVGVPSKD---AVFM---TKPINVLNERTLKGTFFGNYKP---RTDLPSVVDMYMNKQLELEKFITHR 327 (354)
Q Consensus 257 ~~~l~~~~g~~v~~g~~~~~---~~~~---~~~~~~~~~~~i~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~v~~~ 327 (354)
+++++++ |+++.+|..... .... .....+.+++++.++....+.. .+.++++++++.+|++++. +...
T Consensus 224 ~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~ 300 (325)
T TIGR02825 224 IGQMKKF-GRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYK--EYVI 300 (325)
T ss_pred HHHhCcC-cEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCcccc--eecc
Confidence 9999997 999999865321 0111 1112234778888876533221 2357889999999988765 4467
Q ss_pred eccccHHHHHHHHhcCCc-eeEEE
Q 018529 328 IPFSEINKAFEYMVKGEG-LRCII 350 (354)
Q Consensus 328 ~~l~~~~~a~~~~~~~~~-~k~vi 350 (354)
|+|+++.+|++.+.+++. +|+|+
T Consensus 301 ~~l~~~~~A~~~~~~~~~~gkvVv 324 (325)
T TIGR02825 301 EGFENMPAAFMGMLKGENLGKTIV 324 (325)
T ss_pred ccHHHHHHHHHHHhcCCCCCeEEe
Confidence 899999999999988775 57775
No 77
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=1.4e-39 Score=295.53 Aligned_cols=328 Identities=30% Similarity=0.456 Sum_probs=267.5
Q ss_pred cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018529 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90 (354)
Q Consensus 11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd 90 (354)
|||+++.++++ +++.+.+.|+++++||+||+.++++|+.|+....|..+. .+|.++|+|++|+|+.+|++++++++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~-~~p~~~g~~~~G~v~~vG~~v~~~~~Gd 78 (334)
T cd08234 1 MKALVYEGPGE-LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA-APPLVPGHEFAGVVVAVGSKVTGFKVGD 78 (334)
T ss_pred CeeEEecCCCc-eEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC-CCCcccccceEEEEEEeCCCCCCCCCCC
Confidence 78999998885 999999999999999999999999999999988775543 3678999999999999999999999999
Q ss_pred EEEecccCCCCCCcccccCCCC-CCccccc---ccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcC
Q 018529 91 HVLPVFTGECGDCRHCRFSING-EPVNHFL---GTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 166 (354)
Q Consensus 91 ~V~~~~~~~~~~c~~c~~~~~~-~~~~~~~---~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~ 166 (354)
+|++.+...|+.|.+|..+..+ +...+.. ..|+|++|+.++++.++++|+++++.+++.+ +.+.++++++ +.++
T Consensus 79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l-~~~~ 156 (334)
T cd08234 79 RVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVHGL-DLLG 156 (334)
T ss_pred EEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHHHH-HhcC
Confidence 9999888889999999654332 1111112 3589999999999999999999999998776 6888999986 7889
Q ss_pred CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529 167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 246 (354)
Q Consensus 167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~ 246 (354)
++++++|||+|+|.+|.+++++|+..|++.|+++++++++.+.++++|++.++++.+.+ +... +....+++|++||+
T Consensus 157 ~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~-~~~~~~~vd~v~~~ 233 (334)
T cd08234 157 IKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSRED--PEAQ-KEDNPYGFDVVIEA 233 (334)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCCCC--HHHH-HHhcCCCCcEEEEC
Confidence 99999999998899999999999999995588899999999999999998888776654 4344 33333489999999
Q ss_pred ccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhc-cccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCcee
Q 018529 247 TGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFIT 325 (354)
Q Consensus 247 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 325 (354)
+|.......++++++++ |+++.+|.........+....+. +++++.+.... .+.++++++++.++++.+.+.+.
T Consensus 234 ~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~ 308 (334)
T cd08234 234 TGVPKTLEQAIEYARRG-GTVLVFGVYAPDARVSISPFEIFQKELTIIGSFIN----PYTFPRAIALLESGKIDVKGLVS 308 (334)
T ss_pred CCChHHHHHHHHHHhcC-CEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccC----HHHHHHHHHHHHcCCCChhhhEE
Confidence 98767889999999997 99999987543222333333333 67778776532 24588899999999887655567
Q ss_pred eeeccccHHHHHHHHhcCCceeEEE
Q 018529 326 HRIPFSEINKAFEYMVKGEGLRCII 350 (354)
Q Consensus 326 ~~~~l~~~~~a~~~~~~~~~~k~vi 350 (354)
++++++++.++++.+.+...+|+|+
T Consensus 309 ~~~~~~~~~~a~~~~~~~~~~k~vi 333 (334)
T cd08234 309 HRLPLEEVPEALEGMRSGGALKVVV 333 (334)
T ss_pred EEecHHHHHHHHHHHhcCCceEEEe
Confidence 8899999999999998833367775
No 78
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=2.5e-39 Score=294.71 Aligned_cols=330 Identities=31% Similarity=0.485 Sum_probs=270.3
Q ss_pred cceeeeccCC-CceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCCCCC
Q 018529 11 CKAAVAWEAG-KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEV 88 (354)
Q Consensus 11 ~~a~~~~~~~-~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~~~ 88 (354)
|||+++.+++ ..+++.+++.|.+.++|++||+.++++|++|+....+..+. ...|.++|+|++|+|+++|++++.+++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~~ 80 (341)
T cd08297 1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLKV 80 (341)
T ss_pred CceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCCC
Confidence 7899998877 34999999999999999999999999999999888765432 234668899999999999999999999
Q ss_pred CCEEEecc-cCCCCCCcccccCCCCC-C---cccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhh
Q 018529 89 GDHVLPVF-TGECGDCRHCRFSINGE-P---VNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN 163 (354)
Q Consensus 89 Gd~V~~~~-~~~~~~c~~c~~~~~~~-~---~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~ 163 (354)
||+|++.+ ...|+.|.+|..+.... . ..+....|+|++|+.++++.++++|+++++.+++.++..+.+||+++..
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~~~~ 160 (341)
T cd08297 81 GDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKALKK 160 (341)
T ss_pred CCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHHHHHh
Confidence 99999765 56789998885443221 1 1122235899999999999999999999999999999999999998654
Q ss_pred hcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-Ccc
Q 018529 164 VAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVD 241 (354)
Q Consensus 164 ~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~d 241 (354)
.+++++++|||+|+ +.+|++++++|+++|+ +|+++++++++.+.++++|++.++++.+.+ +.+.+.+.+++ ++|
T Consensus 161 -~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~~vd 236 (341)
T cd08297 161 -AGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVDFKKSD--DVEAVKELTGGGGAH 236 (341)
T ss_pred -cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEcCCCcc--HHHHHHHHhcCCCCC
Confidence 58999999999987 6799999999999999 899999999999999999999998887654 77788888766 899
Q ss_pred EEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhh-ccccEEEEEeccCCCCCCCHHHHHHHHHccCCCC
Q 018529 242 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLEL 320 (354)
Q Consensus 242 vv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (354)
++||+.++......++++++++ |+++.+|.... ....+....+ .++.++.+..... .++++++++++.++++.+
T Consensus 237 ~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~ 311 (341)
T cd08297 237 AVVVTAVSAAAYEQALDYLRPG-GTLVCVGLPPG-GFIPLDPFDLVLRGITIVGSLVGT---RQDLQEALEFAARGKVKP 311 (341)
T ss_pred EEEEcCCchHHHHHHHHHhhcC-CEEEEecCCCC-CCCCCCHHHHHhcccEEEEeccCC---HHHHHHHHHHHHcCCCcc
Confidence 9999887778899999999998 99999986542 2223333222 4788888754321 256888999999997754
Q ss_pred CCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529 321 EKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 352 (354)
Q Consensus 321 ~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~ 352 (354)
.+ +.|+++++.++++.+.+++. +|+|++|
T Consensus 312 --~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 312 --HI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred --ee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 33 67999999999999988765 6888875
No 79
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=9.8e-40 Score=298.51 Aligned_cols=322 Identities=24% Similarity=0.270 Sum_probs=255.9
Q ss_pred cceeeeccCCCc--eEEEE-eecCCCCCCeEEEEEeeeecCccchhhhccCCC--------------------CCCCCcc
Q 018529 11 CKAAVAWEAGKP--LIIQD-VEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ--------------------TPLFPRI 67 (354)
Q Consensus 11 ~~a~~~~~~~~~--l~~~~-~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~--------------------~~~~p~~ 67 (354)
|||+++.+++.+ +++.+ .+.|++.+++|+|||.++++|++|+....|..+ ...+|.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (350)
T cd08274 1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI 80 (350)
T ss_pred CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence 688888876653 55543 477778999999999999999999988766432 2346889
Q ss_pred cccceeEEEEEeCCCCCCCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccch
Q 018529 68 FGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKV 147 (354)
Q Consensus 68 ~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~a 147 (354)
+|||++|+|+++|+++++|++||+|++.+..+|+.|..|.... ..+....|+|++|+.++++.++++|+++++.++
T Consensus 81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~----~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~ 156 (350)
T cd08274 81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADID----YIGSERDGGFAEYTVVPAENAYPVNSPLSDVEL 156 (350)
T ss_pred cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCcccccccc----ccCCCCCccceEEEEecHHHceeCCCCCCHHHH
Confidence 9999999999999999999999999999888888887764221 111112489999999999999999999999999
Q ss_pred hhcccchhhhhhhhhhhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCCh
Q 018529 148 CILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 226 (354)
Q Consensus 148 a~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~ 226 (354)
+.+++++.+||+++ ...+++++++|||+|+ |++|++++++|+.+|+ +++++++++ +.+.++++|++.+++.....
T Consensus 157 a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~vi~~~~~~-~~~~~~~~g~~~~~~~~~~~- 232 (350)
T cd08274 157 ATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAVAGAA-KEEAVRALGADTVILRDAPL- 232 (350)
T ss_pred HhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCch-hhHHHHhcCCeEEEeCCCcc-
Confidence 99999999999986 7788999999999998 9999999999999999 678887665 88888999997655543322
Q ss_pred hHHHHHHHHcCC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCC
Q 018529 227 PIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRT 304 (354)
Q Consensus 227 ~~~~~i~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~ 304 (354)
+.+ ...+.+ ++|++||++|+ ..+..++++++++ |+++.+|.... ....+.... +.++.++.++.... ..
T Consensus 233 -~~~--~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~ 303 (350)
T cd08274 233 -LAD--AKALGGEPVDVVADVVGG-PLFPDLLRLLRPG-GRYVTAGAIAG-PVVELDLRTLYLKDLTLFGSTLGT---RE 303 (350)
T ss_pred -HHH--HHhhCCCCCcEEEecCCH-HHHHHHHHHhccC-CEEEEecccCC-ccccCCHHHhhhcceEEEEeecCC---HH
Confidence 333 444455 89999999998 6889999999997 99999986532 112333333 44788888876532 24
Q ss_pred CHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEe
Q 018529 305 DLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 351 (354)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~ 351 (354)
.+.++++++.++++.+ .+.+.|+++++++|++.+.+++. +|+|++
T Consensus 304 ~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~ 349 (350)
T cd08274 304 VFRRLVRYIEEGEIRP--VVAKTFPLSEIREAQAEFLEKRHVGKLVLV 349 (350)
T ss_pred HHHHHHHHHHCCCccc--ccccccCHHHHHHHHHHHhcCCCceEEEEe
Confidence 6888999999997654 36788999999999999987665 588875
No 80
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=2.6e-39 Score=293.48 Aligned_cols=325 Identities=28% Similarity=0.447 Sum_probs=264.6
Q ss_pred cceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018529 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90 (354)
Q Consensus 11 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd 90 (354)
|||+++..+++++.+.+.|.|.+.++||+|+++++++|+.|+....|..+....|.++|||++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd 80 (332)
T cd08259 1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKPGD 80 (332)
T ss_pred CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCCCC
Confidence 68999987666699999999999999999999999999999999887665555678999999999999999999999999
Q ss_pred EEEecccCCCCCCcccccCCCC-CCc---ccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcC
Q 018529 91 HVLPVFTGECGDCRHCRFSING-EPV---NHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 166 (354)
Q Consensus 91 ~V~~~~~~~~~~c~~c~~~~~~-~~~---~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~ 166 (354)
+|++.+..+|+.|.+|...... |.+ ++....|+|++|+.++.+.++++|+++++++++.+++++.+||+++.. +.
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~-~~ 159 (332)
T cd08259 81 RVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALKR-AG 159 (332)
T ss_pred EEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHHHHH-hC
Confidence 9999999999999999755422 222 122235899999999999999999999999999999999999999765 88
Q ss_pred CCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEE
Q 018529 167 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE 245 (354)
Q Consensus 167 ~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d 245 (354)
+.+++++||+|+ |.+|++++++++..|. .|+++++++++.+.++++|.+.+++..+ +.+.+.+.. ++|++++
T Consensus 160 ~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~--~~d~v~~ 232 (332)
T cd08259 160 VKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGSK----FSEDVKKLG--GADVVIE 232 (332)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEecHH----HHHHHHhcc--CCCEEEE
Confidence 999999999987 9999999999999999 8888889999999998899877775433 455555543 6999999
Q ss_pred cccChHhHHHHHHHhhCCCceEEEEcCCCCCcee-ecchhhhccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCce
Q 018529 246 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVF-MTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFI 324 (354)
Q Consensus 246 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~-~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 324 (354)
++|. .....++++++++ |+++.++........ .... ...++.++.++.. ....+++++++++.++.+.+ .+
T Consensus 233 ~~g~-~~~~~~~~~~~~~-g~~v~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~--~~ 304 (332)
T cd08259 233 LVGS-PTIEESLRSLNKG-GRLVLIGNVTPDPAPLRPGL-LILKEIRIIGSIS---ATKADVEEALKLVKEGKIKP--VI 304 (332)
T ss_pred CCCh-HHHHHHHHHhhcC-CEEEEEcCCCCCCcCCCHHH-HHhCCcEEEEecC---CCHHHHHHHHHHHHcCCCcc--ce
Confidence 9998 5688899999997 999999865422111 1111 1236667766532 22346788999999997654 36
Q ss_pred eeeeccccHHHHHHHHhcCCc-eeEEEe
Q 018529 325 THRIPFSEINKAFEYMVKGEG-LRCIIS 351 (354)
Q Consensus 325 ~~~~~l~~~~~a~~~~~~~~~-~k~vi~ 351 (354)
.+.|+++++.+||+.+.+++. +|+|++
T Consensus 305 ~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 305 DRVVSLEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred eEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence 789999999999999988775 577763
No 81
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=6.1e-39 Score=291.62 Aligned_cols=308 Identities=17% Similarity=0.187 Sum_probs=245.6
Q ss_pred ceeeeccC---CCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCC
Q 018529 12 KAAVAWEA---GKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDL 86 (354)
Q Consensus 12 ~a~~~~~~---~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 86 (354)
||+++.++ +.+ +++.++|.|+|+++||+|||.++++|+.|+....+..+...+|.++|+|++|+|+++|++++.|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (336)
T TIGR02817 1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLF 80 (336)
T ss_pred CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 57777775 443 8888999999999999999999999999998887755444567899999999999999999999
Q ss_pred CCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcC
Q 018529 87 EVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 166 (354)
Q Consensus 87 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~ 166 (354)
++||+|++... ....|+|++|+.++++.++++|+++++++++.+++++.+||+++....+
T Consensus 81 ~~Gd~V~~~~~--------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~ 140 (336)
T TIGR02817 81 KPGDEVWYAGD--------------------IDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLG 140 (336)
T ss_pred CCCCEEEEcCC--------------------CCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcC
Confidence 99999986410 1135899999999999999999999999999999999999999877888
Q ss_pred CCC-----CCeEEEEcC-ChhHHHHHHHHHHc-CCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCC
Q 018529 167 PER-----GSSVAVFGL-GAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGG 239 (354)
Q Consensus 167 ~~~-----~~~vlI~G~-g~~G~~a~~~a~~~-g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~ 239 (354)
+++ |++|||+|+ |++|++++|+|+.+ |+ +|+++++++++.++++++|+++++++.. + +.+++++...++
T Consensus 141 ~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~g~~~~~~~~~-~--~~~~i~~~~~~~ 216 (336)
T TIGR02817 141 INDPVAGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLELGAHHVIDHSK-P--LKAQLEKLGLEA 216 (336)
T ss_pred CCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHcCCCEEEECCC-C--HHHHHHHhcCCC
Confidence 877 999999986 99999999999998 99 8999999999999999999999988654 2 777777754458
Q ss_pred ccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhc-cccEEEEEecc--CCCCC-------CCHHHH
Q 018529 240 VDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFG--NYKPR-------TDLPSV 309 (354)
Q Consensus 240 ~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~--~~~~~-------~~~~~~ 309 (354)
+|+++|++++...+...+++++++ |+++.++... .+....+. +++++.+..+. ....+ +.++++
T Consensus 217 vd~vl~~~~~~~~~~~~~~~l~~~-G~~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (336)
T TIGR02817 217 VSYVFSLTHTDQHFKEIVELLAPQ-GRFALIDDPA-----ELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRV 290 (336)
T ss_pred CCEEEEcCCcHHHHHHHHHHhccC-CEEEEEcccc-----cccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHH
Confidence 999999987768899999999997 9999885321 12222222 44555543322 11100 236778
Q ss_pred HHHHHccCCCCCCceeeee---ccccHHHHHHHHhcCCc-eeEEEe
Q 018529 310 VDMYMNKQLELEKFITHRI---PFSEINKAFEYMVKGEG-LRCIIS 351 (354)
Q Consensus 310 ~~~~~~~~~~~~~~v~~~~---~l~~~~~a~~~~~~~~~-~k~vi~ 351 (354)
++++.++.+++. +.+.+ +++++++|++.+.+++. +|+++.
T Consensus 291 ~~l~~~~~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 291 ARLVDAGKIRTT--LAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred HHHHHCCCeecc--chhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 899999976643 33444 46899999999988775 577764
No 82
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=6.4e-39 Score=290.17 Aligned_cols=314 Identities=25% Similarity=0.302 Sum_probs=251.0
Q ss_pred cceeeeccCC-CceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018529 11 CKAAVAWEAG-KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (354)
Q Consensus 11 ~~a~~~~~~~-~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~G 89 (354)
||++++..++ ..+++.+.+.|+++++||+||+.++++|++|+....+ .....+|.++|||++|+|+.+|++++.|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~-~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~G 79 (325)
T cd08264 1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINA-VKVKPMPHIPGAEFAGVVEEVGDHVKGVKKG 79 (325)
T ss_pred CeeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhC-CCCCCCCeecccceeEEEEEECCCCCCCCCC
Confidence 6899887766 3488888888889999999999999999999988764 2222357789999999999999999999999
Q ss_pred CEEEecccCCCCCCcccccCCCCCC-c---ccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhc
Q 018529 90 DHVLPVFTGECGDCRHCRFSINGEP-V---NHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA 165 (354)
Q Consensus 90 d~V~~~~~~~~~~c~~c~~~~~~~~-~---~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~ 165 (354)
|+|++.+...|++|.+|..+....+ . ++....|+|++|+.++++.++++|+++++++++.+++++.+||+++. ..
T Consensus 80 d~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~-~~ 158 (325)
T cd08264 80 DRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALK-TA 158 (325)
T ss_pred CEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHHH-hc
Confidence 9999999999999999986653322 1 12223589999999999999999999999999999999999999964 48
Q ss_pred CCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEE
Q 018529 166 KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV 244 (354)
Q Consensus 166 ~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~ 244 (354)
+++++++|+|+|+ |++|++++++|+++|+ +|+++++ .++++++|++.+++..+ ..+.+++++ +++|+|+
T Consensus 159 ~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~-~v~~~~~----~~~~~~~g~~~~~~~~~----~~~~l~~~~-~~~d~vl 228 (325)
T cd08264 159 GLGPGETVVVFGASGNTGIFAVQLAKMMGA-EVIAVSR----KDWLKEFGADEVVDYDE----VEEKVKEIT-KMADVVI 228 (325)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeH----HHHHHHhCCCeeecchH----HHHHHHHHh-CCCCEEE
Confidence 8999999999997 9999999999999999 7777752 36778899988887643 345566666 6899999
Q ss_pred EcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhh-ccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCc
Q 018529 245 ECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKF 323 (354)
Q Consensus 245 d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (354)
+++|+ ..+..++++++++ |+++.+|.... .........+ .++.++.++..+. +++++++++++... .+ .
T Consensus 229 ~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~--~~--~ 298 (325)
T cd08264 229 NSLGS-SFWDLSLSVLGRG-GRLVTFGTLTG-GEVKLDLSDLYSKQISIIGSTGGT---RKELLELVKIAKDL--KV--K 298 (325)
T ss_pred ECCCH-HHHHHHHHhhccC-CEEEEEecCCC-CCCccCHHHHhhcCcEEEEccCCC---HHHHHHHHHHHHcC--Cc--e
Confidence 99998 6889999999997 99999986421 1122222222 3566777765332 35688888888533 32 3
Q ss_pred eeeeeccccHHHHHHHHhcCCce
Q 018529 324 ITHRIPFSEINKAFEYMVKGEGL 346 (354)
Q Consensus 324 v~~~~~l~~~~~a~~~~~~~~~~ 346 (354)
+.+.|+++++++|++.+.+++..
T Consensus 299 ~~~~~~~~~~~~a~~~~~~~~~~ 321 (325)
T cd08264 299 VWKTFKLEEAKEALKELFSKERD 321 (325)
T ss_pred eEEEEcHHHHHHHHHHHHcCCCc
Confidence 56889999999999998876653
No 83
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=4.8e-39 Score=292.88 Aligned_cols=314 Identities=24% Similarity=0.334 Sum_probs=254.9
Q ss_pred cceeeeccCCCc---eEEEEeecCCCCC-CeEEEEEeeeecCccchhhhccCCCCC-C----CCcccccceeEEEEEeCC
Q 018529 11 CKAAVAWEAGKP---LIIQDVEVAPPQA-MEVRIKIKYTSLCRTDLYFWESKGQTP-L----FPRIFGHEAAGVVESVGE 81 (354)
Q Consensus 11 ~~a~~~~~~~~~---l~~~~~~~p~~~~-~evlV~v~~~~i~~~D~~~~~~~~~~~-~----~p~~~G~e~~G~V~~vG~ 81 (354)
|||+++.+.+.+ +.+.+.|.|+|.+ +||+||+.++++|++|+....+..+.. . .|.++|||++|+|+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80 (341)
T ss_pred CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence 799999988875 8999999998887 999999999999999999887754322 2 577899999999999999
Q ss_pred CCCCCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhh
Q 018529 82 GVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGAT 161 (354)
Q Consensus 82 ~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l 161 (354)
+++.|++||+|++... +.|+|++|+.++++.++++|+++++++++.+++++.+||+++
T Consensus 81 ~v~~~~~Gd~V~~~~~----------------------~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l 138 (341)
T cd08290 81 GVKSLKPGDWVIPLRP----------------------GLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLL 138 (341)
T ss_pred CCCCCCCCCEEEecCC----------------------CCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHH
Confidence 9999999999986521 348999999999999999999999999999999999999998
Q ss_pred hhhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCCh----hhHHHHHhcCCceEEcCCCCC-hhHHHHHHHH
Q 018529 162 LNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS----KRFEEAKKFGVTDFVNTSEHD-RPIQEVIAEM 235 (354)
Q Consensus 162 ~~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~----~~~~~~~~lg~~~v~~~~~~~-~~~~~~i~~~ 235 (354)
.....++++++|||+|+ |++|++++|+|++.|+ +++++.+++ ++.++++++|++.++++.+.. ..+.+.++.+
T Consensus 139 ~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~ 217 (341)
T cd08290 139 EDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGI-KTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATELLKSA 217 (341)
T ss_pred HhhcccCCCCEEEEccchhHHHHHHHHHHHHcCC-eEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccHHHHHHHH
Confidence 77788999999999987 9999999999999999 677776665 678888999999998876540 0266777776
Q ss_pred cCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecch-hhhccccEEEEEeccCCCC---C----CCHH
Q 018529 236 TNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFGNYKP---R----TDLP 307 (354)
Q Consensus 236 ~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~~~~~~---~----~~~~ 307 (354)
.++++|++|||+|+ ..+..++++++++ |+++.+|..... ...... ..+.++.++.+.....+.. . ..+.
T Consensus 218 ~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (341)
T cd08290 218 PGGRPKLALNCVGG-KSATELARLLSPG-GTMVTYGGMSGQ-PVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLE 294 (341)
T ss_pred cCCCceEEEECcCc-HhHHHHHHHhCCC-CEEEEEeccCCC-CcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHH
Confidence 65589999999998 5677889999997 999999864322 222222 2245888988877543321 1 1377
Q ss_pred HHHHHHHccCCCCCCceeeee---ccccHHHHHHHHhcCCc-eeEEEec
Q 018529 308 SVVDMYMNKQLELEKFITHRI---PFSEINKAFEYMVKGEG-LRCIISM 352 (354)
Q Consensus 308 ~~~~~~~~~~~~~~~~v~~~~---~l~~~~~a~~~~~~~~~-~k~vi~~ 352 (354)
.+++++.++++.+. ....+ ++++++++++.+.+++. +|+|+.+
T Consensus 295 ~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 295 ELAELIREGKLKAP--PVEKVTDDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred HHHHHHHcCCccCC--cccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 78899999977654 33455 99999999999987765 5888764
No 84
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=3.6e-39 Score=292.05 Aligned_cols=314 Identities=22% Similarity=0.274 Sum_probs=253.4
Q ss_pred hcceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 018529 10 TCKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLE 87 (354)
Q Consensus 10 ~~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 87 (354)
+||++.+.+++.+ +++.+++.|.++++||+||+.++++|++|+....+..+...+|.++|||++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (327)
T PRK10754 1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIK 80 (327)
T ss_pred CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCC
Confidence 5899999887765 88999999999999999999999999999988877655555688899999999999999999999
Q ss_pred CCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCC
Q 018529 88 VGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKP 167 (354)
Q Consensus 88 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~ 167 (354)
+||+|+... .+.|+|++|+.++.+.++++|+++++++++.+++.+.++|.++...+.+
T Consensus 81 ~Gd~V~~~~----------------------~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~ 138 (327)
T PRK10754 81 VGDRVVYAQ----------------------SALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEI 138 (327)
T ss_pred CCCEEEECC----------------------CCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 999997431 1347999999999999999999999999999988999999987777889
Q ss_pred CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEEE
Q 018529 168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVE 245 (354)
Q Consensus 168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d 245 (354)
++|++|+|+|+ |.+|++++++|+.+|+ +|+++++++++.++++++|++.+++..+.+ +.+.+++++++ ++|++||
T Consensus 139 ~~g~~vlI~g~~g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vl~ 215 (327)
T PRK10754 139 KPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVINYREEN--IVERVKEITGGKKVRVVYD 215 (327)
T ss_pred CCCCEEEEEeCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEcCCCCc--HHHHHHHHcCCCCeEEEEE
Confidence 99999999975 9999999999999999 788898999999999999998888776554 77888888887 8999999
Q ss_pred cccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhc-cccE-EE-EEeccCCCCCC----CHHHHHHHHHccCC
Q 018529 246 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERT-LK-GTFFGNYKPRT----DLPSVVDMYMNKQL 318 (354)
Q Consensus 246 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~-i~-g~~~~~~~~~~----~~~~~~~~~~~~~~ 318 (354)
++|+ ......+++++++ |+++.+|..... ........+. ++.. .. ..........+ .+.++++++.++++
T Consensus 216 ~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l 292 (327)
T PRK10754 216 SVGK-DTWEASLDCLQRR-GLMVSFGNASGP-VTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVI 292 (327)
T ss_pred CCcH-HHHHHHHHHhccC-CEEEEEccCCCC-CCCcCHHHHhccCceEEecceeecccCCHHHHHHHHHHHHHHHHCCCe
Confidence 9988 6788899999997 999999865421 1111111111 1111 11 10000111111 24567889999988
Q ss_pred CCCCceeeeeccccHHHHHHHHhcCCc-eeEEEe
Q 018529 319 ELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 351 (354)
Q Consensus 319 ~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~ 351 (354)
.+.....+.|+++++.++++.+.+++. +|+||+
T Consensus 293 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 326 (327)
T PRK10754 293 KVDVAEQQKFPLKDAQRAHEILESRATQGSSLLI 326 (327)
T ss_pred eeecccCcEEcHHHHHHHHHHHHcCCCcceEEEe
Confidence 765455688999999999999988775 688875
No 85
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=1.2e-38 Score=288.75 Aligned_cols=319 Identities=26% Similarity=0.354 Sum_probs=258.2
Q ss_pred cceeeeccCCC----ceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCC
Q 018529 11 CKAAVAWEAGK----PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDL 86 (354)
Q Consensus 11 ~~a~~~~~~~~----~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 86 (354)
|||+++.+++. ++++.+.+.|.++++||+||+.++++|++|+....|..+....|.++|||++|+|+++|++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRF 80 (329)
T ss_pred CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCC
Confidence 68999988883 58888888888999999999999999999999887765555668899999999999999999999
Q ss_pred CCCCEEEecc-cCCCCCCcccccCCCC-CCc---ccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhh
Q 018529 87 EVGDHVLPVF-TGECGDCRHCRFSING-EPV---NHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGAT 161 (354)
Q Consensus 87 ~~Gd~V~~~~-~~~~~~c~~c~~~~~~-~~~---~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l 161 (354)
++||+|++.+ ..+|++|++|..+... +.. .+....|+|++|+.++.+.++++|+++++.+++.+++++.+||+++
T Consensus 81 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~ 160 (329)
T cd08298 81 SVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRAL 160 (329)
T ss_pred cCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHHHHH
Confidence 9999997654 3679999999644321 111 1222358999999999999999999999999999999999999997
Q ss_pred hhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCcc
Q 018529 162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVD 241 (354)
Q Consensus 162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~d 241 (354)
..+++++++++||+|+|++|++++++|+..|. +|+++++++++.+.++++|++.+++.... ..+++|
T Consensus 161 -~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-----------~~~~vD 227 (329)
T cd08298 161 -KLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADWAGDSDDL-----------PPEPLD 227 (329)
T ss_pred -HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEeccCcc-----------CCCccc
Confidence 88999999999999999999999999999998 89999999999999999999877766432 123799
Q ss_pred EEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCC
Q 018529 242 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELE 321 (354)
Q Consensus 242 vv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (354)
+++++.+....++.++++++++ |+++.+|.... .........+.++..+.++... ..+.+.++++++.++.+.+
T Consensus 228 ~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~l~~~~~l~~- 301 (329)
T cd08298 228 AAIIFAPVGALVPAALRAVKKG-GRVVLAGIHMS-DIPAFDYELLWGEKTIRSVANL---TRQDGEEFLKLAAEIPIKP- 301 (329)
T ss_pred EEEEcCCcHHHHHHHHHHhhcC-CEEEEEcCCCC-CCCccchhhhhCceEEEEecCC---CHHHHHHHHHHHHcCCCCc-
Confidence 9999977768899999999997 99999885331 1111222223356667665532 2245788889999987765
Q ss_pred CceeeeeccccHHHHHHHHhcCCc-eeEEE
Q 018529 322 KFITHRIPFSEINKAFEYMVKGEG-LRCII 350 (354)
Q Consensus 322 ~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi 350 (354)
..+.|+++++++|++.+.+++. +|+|+
T Consensus 302 --~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 302 --EVETYPLEEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred --eEEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence 2588999999999999988765 46653
No 86
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=3e-38 Score=287.52 Aligned_cols=330 Identities=24% Similarity=0.343 Sum_probs=268.0
Q ss_pred cceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 018529 11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE 87 (354)
Q Consensus 11 ~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~~ 87 (354)
|||+++...+.+ +++.+.+.|.+.+++|+|++.++++|++|+..+.|..+. ..+|.++|||++|+|+.+|+++++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (342)
T cd08266 1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK 80 (342)
T ss_pred CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence 689988744332 778888888889999999999999999999988774432 34578899999999999999999999
Q ss_pred CCCEEEecccCCCCCCcccccCCC-CCCccccc---ccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhh
Q 018529 88 VGDHVLPVFTGECGDCRHCRFSIN-GEPVNHFL---GTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN 163 (354)
Q Consensus 88 ~Gd~V~~~~~~~~~~c~~c~~~~~-~~~~~~~~---~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~ 163 (354)
+||+|++.+..+|++|.+|..+.. .|....+. ..|+|++|+.++.+.++++|+.+++.+++.+++++.+||+++.+
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l~~ 160 (342)
T cd08266 81 PGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVT 160 (342)
T ss_pred CCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHHHHH
Confidence 999999999999999999975543 23322222 34789999999999999999999999999999999999999878
Q ss_pred hcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-Ccc
Q 018529 164 VAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVD 241 (354)
Q Consensus 164 ~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~d 241 (354)
...++++++++|+|+ +.+|.+++++++..|+ +|+.+++++++.+.+++++.+.+++..+.+ +.+.+.+.+.+ ++|
T Consensus 161 ~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~d 237 (342)
T cd08266 161 RARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVIDYRKED--FVREVRELTGKRGVD 237 (342)
T ss_pred hcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEEecCChH--HHHHHHHHhCCCCCc
Confidence 889999999999987 7999999999999999 788888999999999888887777655433 66667666655 899
Q ss_pred EEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecch-hhhccccEEEEEeccCCCCCCCHHHHHHHHHccCCCC
Q 018529 242 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLEL 320 (354)
Q Consensus 242 vv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (354)
++++++|. ..+..++++++++ |+++.++..... ...... ..+.+++++.+..... ...+.++++++.++.+.+
T Consensus 238 ~~i~~~g~-~~~~~~~~~l~~~-G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~l~~ 311 (342)
T cd08266 238 VVVEHVGA-ATWEKSLKSLARG-GRLVTCGATTGY-EAPIDLRHVFWRQLSILGSTMGT---KAELDEALRLVFRGKLKP 311 (342)
T ss_pred EEEECCcH-HHHHHHHHHhhcC-CEEEEEecCCCC-CCCcCHHHHhhcceEEEEEecCC---HHHHHHHHHHHHcCCccc
Confidence 99999988 6788999999997 999999866432 112222 2244777887765432 246788899999987654
Q ss_pred CCceeeeeccccHHHHHHHHhcCCc-eeEEEe
Q 018529 321 EKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 351 (354)
Q Consensus 321 ~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~ 351 (354)
.+++.|+++++++|++.+.+++. +|++++
T Consensus 312 --~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 341 (342)
T cd08266 312 --VIDSVFPLEEAAEAHRRLESREQFGKIVLT 341 (342)
T ss_pred --ceeeeEcHHHHHHHHHHHHhCCCCceEEEe
Confidence 36789999999999999887665 588875
No 87
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=2.3e-38 Score=287.17 Aligned_cols=323 Identities=30% Similarity=0.466 Sum_probs=261.3
Q ss_pred ceeeeccCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCE
Q 018529 12 KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDH 91 (354)
Q Consensus 12 ~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~ 91 (354)
||+++.+++..+++++.|.|.+.+++++|++.++++|++|+....+......+|.++|||++|+|+++|+++++|++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~ 80 (330)
T cd08245 1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVGDR 80 (330)
T ss_pred CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccCCE
Confidence 68889888666999999999999999999999999999999988776544456789999999999999999999999999
Q ss_pred EEeccc-CCCCCCcccccCCCCC-Ccc---cccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcC
Q 018529 92 VLPVFT-GECGDCRHCRFSINGE-PVN---HFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 166 (354)
Q Consensus 92 V~~~~~-~~~~~c~~c~~~~~~~-~~~---~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~ 166 (354)
|+..+. ..|++|++|..+..+. ... .....|+|++|+.++++.++++|+++++.+++.+.+.+.+||+++.. ..
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~~-~~ 159 (330)
T cd08245 81 VGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRD-AG 159 (330)
T ss_pred EEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHHh-hC
Confidence 986543 6799999997655432 111 12235899999999999999999999999999999999999998744 78
Q ss_pred CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529 167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 246 (354)
Q Consensus 167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~ 246 (354)
++++++|||+|+|.+|.+++++|+.+|. +|+++++++++.++++++|++.+++..... .... ..+++|+++++
T Consensus 160 ~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~----~~~~~d~vi~~ 232 (330)
T cd08245 160 PRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSGAEL--DEQA----AAGGADVILVT 232 (330)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccCCcc--hHHh----ccCCCCEEEEC
Confidence 9999999999988899999999999999 899999999999999999998888765433 2222 22479999999
Q ss_pred ccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchh-hhccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCcee
Q 018529 247 TGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFIT 325 (354)
Q Consensus 247 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 325 (354)
++.......++++++++ |+++.++..... ....... .+.++.++.++..+. ...++.+++++.++.+.+ ..
T Consensus 233 ~~~~~~~~~~~~~l~~~-G~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ll~~~~l~~---~~ 304 (330)
T cd08245 233 VVSGAAAEAALGGLRRG-GRIVLVGLPESP-PFSPDIFPLIMKRQSIAGSTHGG---RADLQEALDFAAEGKVKP---MI 304 (330)
T ss_pred CCcHHHHHHHHHhcccC-CEEEEECCCCCC-ccccchHHHHhCCCEEEEeccCC---HHHHHHHHHHHHcCCCcc---eE
Confidence 88778889999999997 999999865322 1111112 233677787776432 246788889999987764 34
Q ss_pred eeeccccHHHHHHHHhcCCc-eeEEE
Q 018529 326 HRIPFSEINKAFEYMVKGEG-LRCII 350 (354)
Q Consensus 326 ~~~~l~~~~~a~~~~~~~~~-~k~vi 350 (354)
+.+++++++++|+.+.+++. +|+|+
T Consensus 305 ~~~~~~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 305 ETFPLDQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred EEEcHHHHHHHHHHHHcCCCCcceeC
Confidence 78999999999999988775 46653
No 88
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=5e-38 Score=284.18 Aligned_cols=312 Identities=20% Similarity=0.229 Sum_probs=254.8
Q ss_pred cceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC---CCCCcccccceeEEEEEeCCCCCC
Q 018529 11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT---PLFPRIFGHEAAGVVESVGEGVSD 85 (354)
Q Consensus 11 ~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~---~~~p~~~G~e~~G~V~~vG~~~~~ 85 (354)
|||+.+++++.+ +++.+.+.|.+.++||+|++.++++|++|+....|..+. ...|.++|||++|+|+++|++++.
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~ 80 (324)
T cd08244 1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP 80 (324)
T ss_pred CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence 689999876653 667777777788999999999999999999888765432 345788999999999999999999
Q ss_pred CCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhc
Q 018529 86 LEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA 165 (354)
Q Consensus 86 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~ 165 (354)
+++||+|++... ...|+|++|++++.+.++++|+++++.+++.+++++.+|| ++....
T Consensus 81 ~~~Gd~V~~~~~---------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~-~~~~~~ 138 (324)
T cd08244 81 AWLGRRVVAHTG---------------------RAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTAL-GLLDLA 138 (324)
T ss_pred CCCCCEEEEccC---------------------CCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHH-HHHHhc
Confidence 999999987521 1358999999999999999999999999999999999995 456788
Q ss_pred CCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEE
Q 018529 166 KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRS 243 (354)
Q Consensus 166 ~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv 243 (354)
+++++++|+|+|+ |.+|.+++++|+.+|+ +|+++++++++.+.++++|++.+++..+.+ +.+.+.+++++ ++|++
T Consensus 139 ~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~v 215 (324)
T cd08244 139 TLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVAVDYTRPD--WPDQVREALGGGGVTVV 215 (324)
T ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEecCCcc--HHHHHHHHcCCCCceEE
Confidence 9999999999986 9999999999999999 799999999999999999998888776654 77778777776 89999
Q ss_pred EEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecch-hhhccccEEEEEeccCCCC---CCCHHHHHHHHHccCCC
Q 018529 244 VECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFGNYKP---RTDLPSVVDMYMNKQLE 319 (354)
Q Consensus 244 ~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~~~~~~---~~~~~~~~~~~~~~~~~ 319 (354)
+|++|+ .....++++++++ |+++.+|...... ..+.. ..+.+++++.++....... .+.++++++++.++++.
T Consensus 216 l~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 292 (324)
T cd08244 216 LDGVGG-AIGRAALALLAPG-GRFLTYGWASGEW-TALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAGRLV 292 (324)
T ss_pred EECCCh-HhHHHHHHHhccC-cEEEEEecCCCCC-CccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCCcc
Confidence 999998 4678999999997 9999998754322 23332 2244788888776543221 13467788888888765
Q ss_pred CCCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529 320 LEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 352 (354)
Q Consensus 320 ~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~ 352 (354)
. .+.+.|+++++.+|++.+.+++. +|+++++
T Consensus 293 ~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 293 P--VVGQTFPLERAAEAHAALEARSTVGKVLLLP 324 (324)
T ss_pred C--ccceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence 3 36788999999999999988765 5888764
No 89
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.2e-37 Score=283.03 Aligned_cols=330 Identities=26% Similarity=0.342 Sum_probs=267.3
Q ss_pred cceeeeccCC--CceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 018529 11 CKAAVAWEAG--KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE 87 (354)
Q Consensus 11 ~~a~~~~~~~--~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~~ 87 (354)
|||++++..+ ..+++.+.+.|.++++|++|++.++++|++|+....+..+. ...|.++|||++|+|+++|+++++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (336)
T cd08276 1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK 80 (336)
T ss_pred CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence 7899998765 33888888888889999999999999999999988765433 23578899999999999999999999
Q ss_pred CCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCC
Q 018529 88 VGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKP 167 (354)
Q Consensus 88 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~ 167 (354)
+||+|++.....|..+.+|..... ...+....|+|++|+.++++.++++|+++++.+++.+++++.+||+++.+.+.+
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~~ 158 (336)
T cd08276 81 VGDRVVPTFFPNWLDGPPTAEDEA--SALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPL 158 (336)
T ss_pred CCCEEEEecccccccccccccccc--cccccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcCC
Confidence 999999887666666544422111 112222368999999999999999999999999999999999999998777899
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCC-CChhHHHHHHHHcCC-CccEEEE
Q 018529 168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE-HDRPIQEVIAEMTNG-GVDRSVE 245 (354)
Q Consensus 168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~-~~~~~~~~i~~~~~~-~~dvv~d 245 (354)
++|++|+|+|+|++|++++++|++.|+ +|+++++++++.++++++|.+.+++... .+ +.+.+.+++++ ++|+++|
T Consensus 159 ~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~d~~i~ 235 (336)
T cd08276 159 KPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINYRTTPD--WGEEVLKLTGGRGVDHVVE 235 (336)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcCCcccC--HHHHHHHHcCCCCCcEEEE
Confidence 999999999889999999999999999 7999999999999999999988888765 33 77788888876 9999999
Q ss_pred cccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCcee
Q 018529 246 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFIT 325 (354)
Q Consensus 246 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 325 (354)
+++. ..+..++++++++ |+++.+|..............+.+++++.++.... .+.+.++++++.++.+.+. ..
T Consensus 236 ~~~~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~l~~~--~~ 308 (336)
T cd08276 236 VGGP-GTLAQSIKAVAPG-GVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGS---RAQFEAMNRAIEAHRIRPV--ID 308 (336)
T ss_pred CCCh-HHHHHHHHhhcCC-CEEEEEccCCCCccCcCHHHHhhcceEEEEEecCc---HHHHHHHHHHHHcCCcccc--cC
Confidence 9986 6888999999997 99999987543211111122245888998877543 3468888899988766543 46
Q ss_pred eeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529 326 HRIPFSEINKAFEYMVKGEG-LRCIISM 352 (354)
Q Consensus 326 ~~~~l~~~~~a~~~~~~~~~-~k~vi~~ 352 (354)
+.+++++++++++.+.+++. +|+++++
T Consensus 309 ~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 336 (336)
T cd08276 309 RVFPFEEAKEAYRYLESGSHFGKVVIRV 336 (336)
T ss_pred cEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence 78999999999999987765 5887753
No 90
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=3.3e-38 Score=286.03 Aligned_cols=311 Identities=24% Similarity=0.319 Sum_probs=254.3
Q ss_pred hcceeeeccCCC----ceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCC
Q 018529 10 TCKAAVAWEAGK----PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVS 84 (354)
Q Consensus 10 ~~~a~~~~~~~~----~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~ 84 (354)
.|||+++.+++. ++++++.+.|.+.++|++|||.++++|+.|+....|..+. ..+|.++|||++|+|+.+|++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~ 80 (329)
T cd08250 1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVT 80 (329)
T ss_pred CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCC
Confidence 489999998776 3889999999999999999999999999999988775532 45788999999999999999999
Q ss_pred CCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhh
Q 018529 85 DLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV 164 (354)
Q Consensus 85 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~ 164 (354)
++++||+|++. ..|+|++|+.++.+.++++|+. +.+++.+++++.+||+++.+.
T Consensus 81 ~~~~Gd~V~~~------------------------~~g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~ 134 (329)
T cd08250 81 DFKVGDAVATM------------------------SFGAFAEYQVVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEV 134 (329)
T ss_pred CCCCCCEEEEe------------------------cCcceeEEEEechHHeEECCCC--cchhhhcccHHHHHHHHHHHh
Confidence 99999999865 3579999999999999999997 457778889999999998777
Q ss_pred cCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEE
Q 018529 165 AKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRS 243 (354)
Q Consensus 165 ~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv 243 (354)
.+++++++|+|+|+ |.+|.+++++|+..|+ .|+++++++++.+.++++|++.+++..+.+ +.+.+.+..++++|++
T Consensus 135 ~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~vd~v 211 (329)
T cd08250 135 GEMKSGETVLVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDRPINYKTED--LGEVLKKEYPKGVDVV 211 (329)
T ss_pred cCCCCCCEEEEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCceEEeCCCcc--HHHHHHHhcCCCCeEE
Confidence 88999999999986 9999999999999999 789988999999999999998888766544 6666666654589999
Q ss_pred EEcccChHhHHHHHHHhhCCCceEEEEcCCCCCc---------eeecchhhhccccEEEEEeccCCC--CCCCHHHHHHH
Q 018529 244 VECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA---------VFMTKPINVLNERTLKGTFFGNYK--PRTDLPSVVDM 312 (354)
Q Consensus 244 ~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~---------~~~~~~~~~~~~~~i~g~~~~~~~--~~~~~~~~~~~ 312 (354)
||++|+ ..+..++++++++ |+++.+|...... ...+....+.++.++.++...... ..+.+.+++++
T Consensus 212 ~~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (329)
T cd08250 212 YESVGG-EMFDTCVDNLALK-GRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQHLDRLLQL 289 (329)
T ss_pred EECCcH-HHHHHHHHHhccC-CeEEEEecccCCcccCcccccccccccHHHhhcCceEEEEEhHHHHHHHHHHHHHHHHH
Confidence 999997 7889999999997 9999998654210 112222334578888887653221 12346778899
Q ss_pred HHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEe
Q 018529 313 YMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 351 (354)
Q Consensus 313 ~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~ 351 (354)
+.++.+.+.....+.++++++++|++.+.+++. +|+|++
T Consensus 290 ~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 290 YQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred HHCCCeeeeECCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence 999977664334566899999999999987765 577763
No 91
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=8.2e-38 Score=280.10 Aligned_cols=296 Identities=26% Similarity=0.431 Sum_probs=242.5
Q ss_pred cceeeeccCCC-ceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018529 11 CKAAVAWEAGK-PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (354)
Q Consensus 11 ~~a~~~~~~~~-~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~G 89 (354)
|||++++++++ .+++.+++.|++.++||+|||.++++|++|+....+.......|.++|+|++|+|+.+|++++.|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 80 (306)
T cd08258 1 MKALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVG 80 (306)
T ss_pred CeeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCCC
Confidence 57888887553 49999999999999999999999999999998877754333457889999999999999999999999
Q ss_pred CEEEeccc-CCCCCCcccccCCC-CCC---cccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhh
Q 018529 90 DHVLPVFT-GECGDCRHCRFSIN-GEP---VNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV 164 (354)
Q Consensus 90 d~V~~~~~-~~~~~c~~c~~~~~-~~~---~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~ 164 (354)
|+|++.+. .+|++|++|..+.. .+. .++....|+|++|+.++.+.++++|+++++++++ +..++.++|+++...
T Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~~l~~~ 159 (306)
T cd08258 81 DRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVHAVAER 159 (306)
T ss_pred CEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHHHHHHh
Confidence 99998875 68999999965432 221 1222335899999999999999999999999887 666888999998888
Q ss_pred cCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEE--cCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-Ccc
Q 018529 165 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGV--DRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVD 241 (354)
Q Consensus 165 ~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v--~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~d 241 (354)
++++++++|||.|+|.+|.+++|+|+.+|+ +|+++ ++++++.++++++|++.+ ++...+ +.+.+.++..+ ++|
T Consensus 160 ~~~~~g~~vlI~g~g~~g~~~~~la~~~G~-~v~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~--~~~~l~~~~~~~~vd 235 (306)
T cd08258 160 SGIRPGDTVVVFGPGPIGLLAAQVAKLQGA-TVVVVGTEKDEVRLDVAKELGADAV-NGGEED--LAELVNEITDGDGAD 235 (306)
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEECCCCCHHHHHHHHHhCCccc-CCCcCC--HHHHHHHHcCCCCCC
Confidence 899999999998889999999999999999 67665 345668888899999877 766554 77778877766 899
Q ss_pred EEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhh-ccccEEEEEeccCCCCCCCHHHHHHHHHcc
Q 018529 242 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYKPRTDLPSVVDMYMNK 316 (354)
Q Consensus 242 vv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~ 316 (354)
++||+.|+...+...+++++++ |+++.+|.... ....+....+ .+++++.|++++. +++++++++++++|
T Consensus 236 ~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~~~~~ 306 (306)
T cd08258 236 VVIECSGAVPALEQALELLRKG-GRIVQVGIFGP-LAASIDVERIIQKELSVIGSRSST---PASWETALRLLASG 306 (306)
T ss_pred EEEECCCChHHHHHHHHHhhcC-CEEEEEcccCC-CCcccCHHHHhhcCcEEEEEecCc---hHhHHHHHHHHhcC
Confidence 9999998767889999999997 99999998652 2233333333 4999999988644 36799999998765
No 92
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=1.2e-38 Score=284.69 Aligned_cols=302 Identities=28% Similarity=0.430 Sum_probs=228.7
Q ss_pred eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCC----CCCcccccceeEE---EEEeC-CCCCCCCCCCEEEe
Q 018529 23 LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP----LFPRIFGHEAAGV---VESVG-EGVSDLEVGDHVLP 94 (354)
Q Consensus 23 l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~----~~p~~~G~e~~G~---V~~vG-~~~~~~~~Gd~V~~ 94 (354)
+...+.++|.|++++++|++.++++|+.|+.+..|..... .+|.+++.++.|. +...| ..+..+..||.+..
T Consensus 20 ~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~~ 99 (347)
T KOG1198|consen 20 LFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVVA 99 (347)
T ss_pred EEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEee
Confidence 5567899999999999999999999999999999877553 3675555555554 33334 22234555655543
Q ss_pred cccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhc------CCC
Q 018529 95 VFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA------KPE 168 (354)
Q Consensus 95 ~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~------~~~ 168 (354)
. ...|+|+||+.+|+..++++|+++++++||++++++.|||.+++... +++
T Consensus 100 ~-----------------------~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~ 156 (347)
T KOG1198|consen 100 F-----------------------LSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLS 156 (347)
T ss_pred c-----------------------cCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccC
Confidence 3 35689999999999999999999999999999999999999999988 899
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 247 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~ 247 (354)
+|++|||+|+ |++|++++|+|++.|+ ..+++.+++++.++++++|+++++||++.+ +.+++++.++++||+||||+
T Consensus 157 ~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy~~~~--~~e~~kk~~~~~~DvVlD~v 233 (347)
T KOG1198|consen 157 KGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDYKDEN--VVELIKKYTGKGVDVVLDCV 233 (347)
T ss_pred CCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecCCCHH--HHHHHHhhcCCCccEEEECC
Confidence 9999999976 9999999999999996 555666999999999999999999999965 99999998844999999999
Q ss_pred cChHhHHHHHHHhhCCCceEEEEcCCCCC-ceeecchhh-hccc-----cEEEEEecc---CCCCCCCHHHHHHHHHccC
Q 018529 248 GNIDNMISAFECVHDGWGVAVLVGVPSKD-AVFMTKPIN-VLNE-----RTLKGTFFG---NYKPRTDLPSVVDMYMNKQ 317 (354)
Q Consensus 248 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~-~~~~~~~~~-~~~~-----~~i~g~~~~---~~~~~~~~~~~~~~~~~~~ 317 (354)
|+ ........++... |+...++...+. ......... ..+. ..+.+..+. .....+.++.+.++++.+
T Consensus 234 g~-~~~~~~~~~l~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ie~g- 310 (347)
T KOG1198|consen 234 GG-STLTKSLSCLLKG-GGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKALVELIEKG- 310 (347)
T ss_pred CC-CccccchhhhccC-CceEEEEeccccccccccccchhhhhhhhheeeeeeccceeeeeecCCHHHHHHHHHHHHcC-
Confidence 99 4777777888776 654444433211 111111000 0111 111111110 112235678899999999
Q ss_pred CCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEecCC
Q 018529 318 LELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISMED 354 (354)
Q Consensus 318 ~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~~d 354 (354)
++.+.+.+.||++++.+|++.+.+++. +|+|+.+.+
T Consensus 311 -kikp~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~~ 347 (347)
T KOG1198|consen 311 -KIKPVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKDV 347 (347)
T ss_pred -cccCCcceeeeHHHHHHHHHHHhhcCCcceEEEEecC
Confidence 455558899999999999999988664 799988753
No 93
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1.7e-37 Score=281.84 Aligned_cols=314 Identities=20% Similarity=0.276 Sum_probs=254.4
Q ss_pred hcceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCCC
Q 018529 10 TCKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDL 86 (354)
Q Consensus 10 ~~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~ 86 (354)
||||+++.+++.. +++.+.+.|++.++||+|||.++++|+.|+....+..+. ...|.++|||++|+|+++|++++++
T Consensus 1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~ 80 (334)
T PTZ00354 1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRF 80 (334)
T ss_pred CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 6999999988763 777788888889999999999999999999888764432 3346789999999999999999999
Q ss_pred CCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcC
Q 018529 87 EVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 166 (354)
Q Consensus 87 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~ 166 (354)
++||+|+++ ...|+|++|++++.+.++++|+++++.+++.+++++.+||+++.....
T Consensus 81 ~~Gd~V~~~-----------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~ 137 (334)
T PTZ00354 81 KEGDRVMAL-----------------------LPGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGD 137 (334)
T ss_pred CCCCEEEEe-----------------------cCCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999865 134799999999999999999999999999999999999999877788
Q ss_pred CCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEE
Q 018529 167 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSV 244 (354)
Q Consensus 167 ~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~ 244 (354)
++++++|+|+|+ |++|++++++|+.+|+ .++.+++++++.++++++|++.+++....+ .+.+.+.+.+++ ++|++|
T Consensus 138 ~~~~~~vlI~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~i 215 (334)
T PTZ00354 138 VKKGQSVLIHAGASGVGTAAAQLAEKYGA-ATIITTSSEEKVDFCKKLAAIILIRYPDEE-GFAPKVKKLTGEKGVNLVL 215 (334)
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecCChh-HHHHHHHHHhCCCCceEEE
Confidence 999999999986 9999999999999999 666788999999999999998888765432 266777777766 899999
Q ss_pred EcccChHhHHHHHHHhhCCCceEEEEcCCCCCceee-cchhhh-ccccEEEEEeccCCCCC-------CCHHHHHHHHHc
Q 018529 245 ECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFM-TKPINV-LNERTLKGTFFGNYKPR-------TDLPSVVDMYMN 315 (354)
Q Consensus 245 d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~-~~~~~~-~~~~~i~g~~~~~~~~~-------~~~~~~~~~~~~ 315 (354)
|++|+ ..+..++++++++ |+++.++.... .... +....+ .++.++.++........ +.++++++++.+
T Consensus 216 ~~~~~-~~~~~~~~~l~~~-g~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (334)
T PTZ00354 216 DCVGG-SYLSETAEVLAVD-GKWIVYGFMGG-AKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEE 292 (334)
T ss_pred ECCch-HHHHHHHHHhccC-CeEEEEecCCC-CcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHC
Confidence 99987 7889999999997 99999986432 2211 332222 35668877665432211 113667788888
Q ss_pred cCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEecC
Q 018529 316 KQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME 353 (354)
Q Consensus 316 ~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~~ 353 (354)
+.+.+. +.+.+++++++++++.+.+++. +|+|+.+.
T Consensus 293 ~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~ 329 (334)
T PTZ00354 293 GEIKPI--VDRTYPLEEVAEAHTFLEQNKNIGKVVLTVN 329 (334)
T ss_pred CCccCc--cccEEcHHHHHHHHHHHHhCCCCceEEEecC
Confidence 876543 5688999999999999987764 68888764
No 94
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=1.2e-37 Score=283.27 Aligned_cols=315 Identities=23% Similarity=0.315 Sum_probs=248.5
Q ss_pred cceeeeccCC-CceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018529 11 CKAAVAWEAG-KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (354)
Q Consensus 11 ~~a~~~~~~~-~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~G 89 (354)
|||+++..++ ..+++.+.+.|+|+++||+|++.++++|++|+....+.. ....|.++|||++|+|+.+|++++.|++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~~~~~G 79 (339)
T cd08249 1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF-IPSYPAILGCDFAGTVVEVGSGVTRFKVG 79 (339)
T ss_pred CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc-ccCCCceeeeeeeEEEEEeCCCcCcCCCC
Confidence 7899999884 338899999999999999999999999999998765533 12347789999999999999999999999
Q ss_pred CEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCC--
Q 018529 90 DHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKP-- 167 (354)
Q Consensus 90 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~-- 167 (354)
|+|++.+...|+ +....|+|++|+.++.+.++++|+++++.+++.+++++.+||+++.+..++
T Consensus 80 d~V~~~~~~~~~---------------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~ 144 (339)
T cd08249 80 DRVAGFVHGGNP---------------NDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPL 144 (339)
T ss_pred CEEEEEeccccC---------------CCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCC
Confidence 999987543322 123468999999999999999999999999999999999999997666544
Q ss_pred --------CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC
Q 018529 168 --------ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG 238 (354)
Q Consensus 168 --------~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~ 238 (354)
+++++|+|+|+ |.+|++++++|+.+|+ +|+++. ++++.+.++++|++.++++.+.+ +.+.+++++.+
T Consensus 145 ~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~~~~g~~~v~~~~~~~--~~~~l~~~~~~ 220 (339)
T cd08249 145 PPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLVKSLGADAVFDYHDPD--VVEDIRAATGG 220 (339)
T ss_pred CCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHHHhcCCCEEEECCCch--HHHHHHHhcCC
Confidence 78999999997 9999999999999999 777776 56888999999999888886654 77778877767
Q ss_pred CccEEEEcccChHhHHHHHHHhhC--CCceEEEEcCCCCCceeecchhhhccccEEEEEeccC------CCCCCCHHHHH
Q 018529 239 GVDRSVECTGNIDNMISAFECVHD--GWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN------YKPRTDLPSVV 310 (354)
Q Consensus 239 ~~dvv~d~~g~~~~~~~~~~~l~~--~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~------~~~~~~~~~~~ 310 (354)
++|++||++|++..+..+++++++ + |+++.++...... .. .. ......+....... ......++.++
T Consensus 221 ~~d~vl~~~g~~~~~~~~~~~l~~~~~-g~~v~~g~~~~~~--~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (339)
T cd08249 221 KLRYALDCISTPESAQLCAEALGRSGG-GKLVSLLPVPEET--EP-RK-GVKVKFVLGYTVFGEIPEDREFGEVFWKYLP 295 (339)
T ss_pred CeeEEEEeeccchHHHHHHHHHhccCC-CEEEEecCCCccc--cC-CC-CceEEEEEeeeecccccccccchHHHHHHHH
Confidence 899999999986789999999999 8 9999998664221 00 00 01111112221110 01112466788
Q ss_pred HHHHccCCCCCCceeeeec--cccHHHHHHHHhcCC-c-eeEEEec
Q 018529 311 DMYMNKQLELEKFITHRIP--FSEINKAFEYMVKGE-G-LRCIISM 352 (354)
Q Consensus 311 ~~~~~~~~~~~~~v~~~~~--l~~~~~a~~~~~~~~-~-~k~vi~~ 352 (354)
+++.++++.+.+ ...++ ++++++||+.+..++ . +|+|+++
T Consensus 296 ~~~~~~~l~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 296 ELLEEGKLKPHP--VRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred HHHHcCCccCCC--ceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 899999877653 34566 999999999998877 5 6888864
No 95
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=3e-37 Score=279.22 Aligned_cols=312 Identities=19% Similarity=0.236 Sum_probs=242.3
Q ss_pred cceeeeccCCC--ceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 018529 11 CKAAVAWEAGK--PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE 87 (354)
Q Consensus 11 ~~a~~~~~~~~--~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~~ 87 (354)
|||+++.+++. ++++.+.|.|.++++||+|++.++++|++|+....|..+. ..+|.++|||++|+|+++ +++.|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~ 78 (325)
T cd05280 1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR 78 (325)
T ss_pred CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence 78999999886 5999999999999999999999999999999988775432 345788999999999998 456799
Q ss_pred CCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhc--
Q 018529 88 VGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA-- 165 (354)
Q Consensus 88 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~-- 165 (354)
+||+|++... ..+....|+|++|+.++++.++++|+++++.+++.+++.+.++|+++....
T Consensus 79 ~Gd~V~~~~~-----------------~~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~ 141 (325)
T cd05280 79 EGDEVLVTGY-----------------DLGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDN 141 (325)
T ss_pred CCCEEEEccc-----------------ccCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhc
Confidence 9999987521 011223589999999999999999999999999999999999999875443
Q ss_pred CCC-CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEE
Q 018529 166 KPE-RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRS 243 (354)
Q Consensus 166 ~~~-~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv 243 (354)
++. .+++|+|+|+ |.+|++++++|+.+|+ +|+++++++++.+.++++|++.+++..+. ..+..+....+++|+|
T Consensus 142 ~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~d~v 217 (325)
T cd05280 142 GQTPEDGPVLVTGATGGVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGASEVLDREDL---LDESKKPLLKARWAGA 217 (325)
T ss_pred cCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEcchhH---HHHHHHHhcCCCccEE
Confidence 335 3579999997 9999999999999999 79999999999999999999888876432 1122333333489999
Q ss_pred EEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhh-ccccEEEEEeccCCCCCCCHHH----HHHHHHccCC
Q 018529 244 VECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYKPRTDLPS----VVDMYMNKQL 318 (354)
Q Consensus 244 ~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~----~~~~~~~~~~ 318 (354)
||++|+ ..+..++++++++ |+++.+|....... ......+ .+++++.+....... .+...+ +.+++..+
T Consensus 218 i~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-- 291 (325)
T cd05280 218 IDTVGG-DVLANLLKQTKYG-GVVASCGNAAGPEL-TTTVLPFILRGVSLLGIDSVNCP-MELRKQVWQKLATEWKPD-- 291 (325)
T ss_pred EECCch-HHHHHHHHhhcCC-CEEEEEecCCCCcc-ccccchheeeeeEEEEEEeecCc-hhHHHHHHHHHHHHHhcC--
Confidence 999998 6889999999997 99999987543221 2333334 588888886654321 122323 33333444
Q ss_pred CCCCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529 319 ELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 352 (354)
Q Consensus 319 ~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~ 352 (354)
....+..+|++++++++++.+.+++. +|+|+++
T Consensus 292 -~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 292 -LLEIVVREISLEELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred -CccceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence 22236789999999999999988775 5888764
No 96
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3.7e-37 Score=276.19 Aligned_cols=298 Identities=24% Similarity=0.299 Sum_probs=241.7
Q ss_pred cceeeeccCCC-ceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018529 11 CKAAVAWEAGK-PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (354)
Q Consensus 11 ~~a~~~~~~~~-~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~G 89 (354)
||++++.+.+. .+++.+.+.|.++++||+||+.++++|+.|+..... ...|.++|||++|+|+++|+++..|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~----~~~~~~~g~e~~G~v~~~G~~v~~~~~G 76 (305)
T cd08270 1 MRALVVDPDAPLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAE----RPDGAVPGWDAAGVVERAAADGSGPAVG 76 (305)
T ss_pred CeEEEEccCCCceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhcc----CCCCCcccceeEEEEEEeCCCCCCCCCC
Confidence 68888887541 277778899999999999999999999999987642 2236789999999999999999999999
Q ss_pred CEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCCCC
Q 018529 90 DHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER 169 (354)
Q Consensus 90 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~ 169 (354)
|+|++. ...|+|++|+.++++.++++|+++++.+++++++.+.+||+++...... +
T Consensus 77 d~V~~~-----------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~-~ 132 (305)
T cd08270 77 ARVVGL-----------------------GAMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPL-L 132 (305)
T ss_pred CEEEEe-----------------------cCCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCC-C
Confidence 999865 1258999999999999999999999999999999999999997655544 5
Q ss_pred CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529 170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 248 (354)
Q Consensus 170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g 248 (354)
|++|+|+|+ |++|.+++++|+..|+ +|+++++++++.+.++++|++.+++.... +.++++|+++|++|
T Consensus 133 ~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~d~vl~~~g 201 (305)
T cd08270 133 GRRVLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVGGSE----------LSGAPVDLVVDSVG 201 (305)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecccc----------ccCCCceEEEECCC
Confidence 999999998 9999999999999999 89999999999999999998765543221 12247999999999
Q ss_pred ChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhc---cccEEEEEeccC-CCCCCCHHHHHHHHHccCCCCCCce
Q 018529 249 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL---NERTLKGTFFGN-YKPRTDLPSVVDMYMNKQLELEKFI 324 (354)
Q Consensus 249 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~---~~~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v 324 (354)
+ ..+..++++++.+ |+++.+|... .....+....+. ++.++.++.+.. ....+.+..+++++.++++.+. +
T Consensus 202 ~-~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~ 276 (305)
T cd08270 202 G-PQLARALELLAPG-GTVVSVGSSS-GEPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAAGRLDPR--I 276 (305)
T ss_pred c-HHHHHHHHHhcCC-CEEEEEeccC-CCcccccHHHHhcccccceEEEEEccCHHHHHHHHHHHHHHHHCCCccce--e
Confidence 8 5789999999997 9999998654 222223333333 478888877543 1112357788899999988754 6
Q ss_pred eeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529 325 THRIPFSEINKAFEYMVKGEG-LRCIISM 352 (354)
Q Consensus 325 ~~~~~l~~~~~a~~~~~~~~~-~k~vi~~ 352 (354)
.+.++++++++|++.+.+++. +|+|++|
T Consensus 277 ~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 277 GWRGSWTEIDEAAEALLARRFRGKAVLDV 305 (305)
T ss_pred ccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 688999999999999987765 5888864
No 97
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=2.5e-37 Score=258.79 Aligned_cols=298 Identities=18% Similarity=0.252 Sum_probs=243.5
Q ss_pred eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeC--CCCCCCCCCCEEEecccCCC
Q 018529 23 LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVG--EGVSDLEVGDHVLPVFTGEC 100 (354)
Q Consensus 23 l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG--~~~~~~~~Gd~V~~~~~~~~ 100 (354)
++++++++|+|++||||+|..|.++++...- +.+..+..-.|+-+|-.++|.++... |..++|++||.|...
T Consensus 27 F~lee~~vp~p~~GqvLl~~~ylS~DPymRg-rm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~----- 100 (340)
T COG2130 27 FRLEEVDVPEPGEGQVLLRTLYLSLDPYMRG-RMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGV----- 100 (340)
T ss_pred ceeEeccCCCCCcCceEEEEEEeccCHHHee-cccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEec-----
Confidence 9999999999999999999999999884332 22223344567888887776544433 557789999999855
Q ss_pred CCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccc--hhhcccchhhhhhhhhhhcCCCCCCeEEEEcC
Q 018529 101 GDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK--VCILSCGVSTGLGATLNVAKPERGSSVAVFGL 178 (354)
Q Consensus 101 ~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~--aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~ 178 (354)
.+|+||..++.+.+.+++++.-+.. ...|..+..|||.+|.+.+.+++|++|+|.||
T Consensus 101 ---------------------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaA 159 (340)
T COG2130 101 ---------------------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAA 159 (340)
T ss_pred ---------------------ccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEec
Confidence 4899999999999999986543222 23367899999999999999999999999987
Q ss_pred -ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccChHhHHHH
Q 018529 179 -GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISA 256 (354)
Q Consensus 179 -g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~ 256 (354)
|++|..+.|+||..|+ +|+++..++||.+++.+ +|+|.++||+..+ +.+++++..+.|.|+.||++|+ +.++..
T Consensus 160 aGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d--~~~~L~~a~P~GIDvyfeNVGg-~v~DAv 235 (340)
T COG2130 160 AGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKAED--FAQALKEACPKGIDVYFENVGG-EVLDAV 235 (340)
T ss_pred ccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCccc--HHHHHHHHCCCCeEEEEEcCCc-hHHHHH
Confidence 9999999999999999 99999999999999988 9999999999986 9999999998899999999999 899999
Q ss_pred HHHhhCCCceEEEEcCCCCC--c----eeecchhhhccccEEEEEeccC-CCCC--CCHHHHHHHHHccCCCCCCceeee
Q 018529 257 FECVHDGWGVAVLVGVPSKD--A----VFMTKPINVLNERTLKGTFFGN-YKPR--TDLPSVVDMYMNKQLELEKFITHR 327 (354)
Q Consensus 257 ~~~l~~~~g~~v~~g~~~~~--~----~~~~~~~~~~~~~~i~g~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~v~~~ 327 (354)
+..|+.. +|+..||..+.- . .....+..+.+.+++.|+...+ +..+ +.++++.+++.+|+|+.++ +-+
T Consensus 236 ~~~ln~~-aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~e--ti~ 312 (340)
T COG2130 236 LPLLNLF-ARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRE--TIV 312 (340)
T ss_pred HHhhccc-cceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEe--eeh
Confidence 9999997 999999975421 1 1111222234789999987732 2222 4577899999999998875 345
Q ss_pred eccccHHHHHHHHhcCCc-eeEEEecCC
Q 018529 328 IPFSEINKAFEYMVKGEG-LRCIISMED 354 (354)
Q Consensus 328 ~~l~~~~~a~~~~~~~~~-~k~vi~~~d 354 (354)
-+|+.+++||.-+.++++ +|+|+.+.|
T Consensus 313 dGlEnaP~Af~gLl~G~N~GK~vvKv~~ 340 (340)
T COG2130 313 DGLENAPEAFIGLLSGKNFGKLVVKVAD 340 (340)
T ss_pred hhhhccHHHHHHHhcCCccceEEEEecC
Confidence 579999999999999987 699998865
No 98
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=6.6e-37 Score=276.72 Aligned_cols=298 Identities=22% Similarity=0.334 Sum_probs=249.0
Q ss_pred eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCCCCCCCEEEecccCCCC
Q 018529 23 LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECG 101 (354)
Q Consensus 23 l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~ 101 (354)
+++++.+.|++.+++|+|||.++++|+.|+..+.+.... ..+|.++|||++|+|+.+|++++.+++||+|++.+
T Consensus 14 ~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~----- 88 (323)
T cd05282 14 LELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLG----- 88 (323)
T ss_pred EEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeC-----
Confidence 667788888899999999999999999999887765432 34578999999999999999999999999999752
Q ss_pred CCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcC-Ch
Q 018529 102 DCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GA 180 (354)
Q Consensus 102 ~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~-g~ 180 (354)
..|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++.....+.++++|||+|+ |.
T Consensus 89 ------------------~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~ 150 (323)
T cd05282 89 ------------------GEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSA 150 (323)
T ss_pred ------------------CCCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccH
Confidence 14799999999999999999999999999999999999999877788899999999987 99
Q ss_pred hHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEEEcccChHhHHHHHHH
Q 018529 181 VGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFEC 259 (354)
Q Consensus 181 ~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d~~g~~~~~~~~~~~ 259 (354)
+|++++++|+.+|+ .++++.+++++.+.++++|++.++++.+.+ +.+.+.+++++ ++|++||++|+ ......+++
T Consensus 151 vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vl~~~g~-~~~~~~~~~ 226 (323)
T cd05282 151 VGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSSPED--LAQRVKEATGGAGARLALDAVGG-ESATRLARS 226 (323)
T ss_pred HHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEecccchh--HHHHHHHHhcCCCceEEEECCCC-HHHHHHHHh
Confidence 99999999999999 788888999999999999999988876644 77778888877 99999999998 556788999
Q ss_pred hhCCCceEEEEcCCCCCceeecchhhhc-cccEEEEEeccCCCC-------CCCHHHHHHHHHccCCCCCCceeeeeccc
Q 018529 260 VHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKP-------RTDLPSVVDMYMNKQLELEKFITHRIPFS 331 (354)
Q Consensus 260 l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~v~~~~~l~ 331 (354)
++++ |+++.+|..... ...+....+. ++.++.+.....+.. .+.++++++++.++++.+. ..+.|+++
T Consensus 227 l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--~~~~~~~~ 302 (323)
T cd05282 227 LRPG-GTLVNYGLLSGE-PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTP--VGAKFPLE 302 (323)
T ss_pred hCCC-CEEEEEccCCCC-CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccC--ccceecHH
Confidence 9997 999999876533 2334444444 788888877654321 1246778888888876643 57889999
Q ss_pred cHHHHHHHHhcCCc-eeEEEe
Q 018529 332 EINKAFEYMVKGEG-LRCIIS 351 (354)
Q Consensus 332 ~~~~a~~~~~~~~~-~k~vi~ 351 (354)
++.+||+.+.+++. +|+|++
T Consensus 303 ~~~~a~~~~~~~~~~~kvv~~ 323 (323)
T cd05282 303 DFEEAVAAAEQPGRGGKVLLT 323 (323)
T ss_pred HHHHHHHHHhcCCCCceEeeC
Confidence 99999999987765 577763
No 99
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=1.5e-36 Score=272.99 Aligned_cols=301 Identities=25% Similarity=0.366 Sum_probs=242.9
Q ss_pred cCCCceEEEEeecCCCCCCeEEEEEeeeecCccchhhh-ccCCCC--CCCCcccccceeEEEEEeCCCCCCCCCCCEEEe
Q 018529 18 EAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFW-ESKGQT--PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLP 94 (354)
Q Consensus 18 ~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~-~~~~~~--~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~ 94 (354)
+.++ +++.+++.|+++++||+|++.++++|++|+... .+.... ...|.++|+|++|+|+.+|++++++++||+|++
T Consensus 3 ~~~~-~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~ 81 (312)
T cd08269 3 GPGR-FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAG 81 (312)
T ss_pred CCCe-eEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEE
Confidence 4444 899999999999999999999999999999877 554321 224778999999999999999999999999986
Q ss_pred cccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCCCCCCeEE
Q 018529 95 VFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVA 174 (354)
Q Consensus 95 ~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vl 174 (354)
. ..|+|++|+.++++.++++|+++ ..++.+..+++++|+++. ..+++++++|+
T Consensus 82 ~------------------------~~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~-~~~~~~~~~vl 134 (312)
T cd08269 82 L------------------------SGGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR-RGWIRAGKTVA 134 (312)
T ss_pred e------------------------cCCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-hcCCCCCCEEE
Confidence 5 34799999999999999999998 233332368889998864 78899999999
Q ss_pred EEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEEEcccChHhH
Q 018529 175 VFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNM 253 (354)
Q Consensus 175 I~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d~~g~~~~~ 253 (354)
|+|+|.+|.+++++|+..|++.|+++++++++.++++++|++.+++....+ +.+.+.+++++ ++|+++|+.|+....
T Consensus 135 I~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~l~~~~~~~~vd~vld~~g~~~~~ 212 (312)
T cd08269 135 VIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDSEA--IVERVRELTGGAGADVVIEAVGHQWPL 212 (312)
T ss_pred EECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCCcC--HHHHHHHHcCCCCCCEEEECCCCHHHH
Confidence 998899999999999999994399999999999999999998888765544 77888888776 999999999887788
Q ss_pred HHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCC-CCCCHHHHHHHHHccCCCCCCceeeeeccc
Q 018529 254 ISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYK-PRTDLPSVVDMYMNKQLELEKFITHRIPFS 331 (354)
Q Consensus 254 ~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~ 331 (354)
..++++++++ |+++.+|... .....+.... ..+++++.++...... ..+.++++++++.++++.+...+.+.|+++
T Consensus 213 ~~~~~~l~~~-g~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 290 (312)
T cd08269 213 DLAGELVAER-GRLVIFGYHQ-DGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLTHEFPLE 290 (312)
T ss_pred HHHHHHhccC-CEEEEEccCC-CCCcccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchhheeeeecHH
Confidence 9999999997 9999998654 2222222222 3477777766533321 225688899999999877654467889999
Q ss_pred cHHHHHHHHhcCCc--eeEEE
Q 018529 332 EINKAFEYMVKGEG--LRCII 350 (354)
Q Consensus 332 ~~~~a~~~~~~~~~--~k~vi 350 (354)
+++++++.+.+++. +|.+|
T Consensus 291 ~~~~a~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 291 ELGDAFEAARRRPDGFIKGVI 311 (312)
T ss_pred HHHHHHHHHHhCCCCceEEEe
Confidence 99999999988753 68776
No 100
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.2e-36 Score=274.46 Aligned_cols=311 Identities=24% Similarity=0.357 Sum_probs=247.7
Q ss_pred cceeeeccCCC--ceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 018529 11 CKAAVAWEAGK--PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV 88 (354)
Q Consensus 11 ~~a~~~~~~~~--~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 88 (354)
||++.+...+. .+++.+.+.|.++++||+||+.++++|+.|+....+..+....|.++|||++|+|+++|+ ..+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~ 78 (320)
T cd08243 1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTP 78 (320)
T ss_pred CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCC
Confidence 68888877664 267778888788999999999999999999998877554445678899999999999995 57999
Q ss_pred CCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCCC
Q 018529 89 GDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE 168 (354)
Q Consensus 89 Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~ 168 (354)
||+|++....- +....|+|++|+.++++.++++|+++++++++.+++++.+||+++.+...++
T Consensus 79 Gd~V~~~~~~~-----------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~ 141 (320)
T cd08243 79 GQRVATAMGGM-----------------GRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQ 141 (320)
T ss_pred CCEEEEecCCC-----------------CCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCC
Confidence 99998762100 0112489999999999999999999999999999999999999987778899
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 247 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~ 247 (354)
+|++|||+|+ |++|++++|+|+..|+ +|+++++++++.+.++++|++.+++. .. ++.+.+.++ ++++|+++|++
T Consensus 142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~-~~--~~~~~i~~~-~~~~d~vl~~~ 216 (320)
T cd08243 142 PGDTLLIRGGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVID-DG--AIAEQLRAA-PGGFDKVLELV 216 (320)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEec-Cc--cHHHHHHHh-CCCceEEEECC
Confidence 9999999997 9999999999999999 79999999999999999999887754 22 367777777 45899999999
Q ss_pred cChHhHHHHHHHhhCCCceEEEEcCCCCCcee-ecch---hhhccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCc
Q 018529 248 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVF-MTKP---INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKF 323 (354)
Q Consensus 248 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~-~~~~---~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (354)
|+ ..+..++++++++ |+++.+|........ .... ..+.+++++.++...... ...++.+++++..+.+.+.
T Consensus 217 ~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-- 291 (320)
T cd08243 217 GT-ATLKDSLRHLRPG-GIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVP-QTPLQELFDFVAAGHLDIP-- 291 (320)
T ss_pred Ch-HHHHHHHHHhccC-CEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhhh-HHHHHHHHHHHHCCceecc--
Confidence 98 6889999999997 999999875322111 1111 112356677665532211 1347788899999977643
Q ss_pred eeeeeccccHHHHHHHHhcCCc-eeEEE
Q 018529 324 ITHRIPFSEINKAFEYMVKGEG-LRCII 350 (354)
Q Consensus 324 v~~~~~l~~~~~a~~~~~~~~~-~k~vi 350 (354)
..+.|+++++++|++.+.+++. +|+|+
T Consensus 292 ~~~~~~l~~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 292 PSKVFTFDEIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred cccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence 5678999999999999987765 46664
No 101
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=100.00 E-value=2.3e-36 Score=273.56 Aligned_cols=314 Identities=18% Similarity=0.195 Sum_probs=240.2
Q ss_pred cceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCC-CCCCCCcccccceeEEEEEeCCCCCCCC
Q 018529 11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG-QTPLFPRIFGHEAAGVVESVGEGVSDLE 87 (354)
Q Consensus 11 ~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~-~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 87 (354)
|||+++.+++.+ +++++.+.|.|+++||+||+.++++|++|.....+.+ ....+|.++|||++|+|+++| +++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~ 78 (326)
T cd08289 1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK 78 (326)
T ss_pred CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence 789999988764 8889999999999999999999999999987654322 123458899999999999964 46799
Q ss_pred CCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhh--c
Q 018529 88 VGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV--A 165 (354)
Q Consensus 88 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~--~ 165 (354)
+||+|++.+.. .+....|+|++|+.++++.++++|+++++++++.+++++.+||+++... .
T Consensus 79 ~Gd~V~~~~~~-----------------~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~ 141 (326)
T cd08289 79 PGDEVIVTSYD-----------------LGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEEN 141 (326)
T ss_pred CCCEEEEcccc-----------------cCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhc
Confidence 99999876320 0112358999999999999999999999999999999999999886433 2
Q ss_pred C-CCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEE
Q 018529 166 K-PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRS 243 (354)
Q Consensus 166 ~-~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv 243 (354)
. ...+++|||+|+ |.+|.+++|+|+.+|+ +|+++++++++.++++++|++.+++..+. ..+.+++++++++|++
T Consensus 142 ~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~~---~~~~~~~~~~~~~d~v 217 (326)
T cd08289 142 GLTPEQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKEVIPREEL---QEESIKPLEKQRWAGA 217 (326)
T ss_pred CCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCEEEcchhH---HHHHHHhhccCCcCEE
Confidence 3 345789999998 9999999999999999 89999999999999999999888876542 2445666654489999
Q ss_pred EEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhh-ccccEEEEEeccCCCCCCCHHHHHHHHHccCCC---
Q 018529 244 VECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE--- 319 (354)
Q Consensus 244 ~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~--- 319 (354)
||++|+ ..+..++++++++ |+++.+|.... ...+.....+ .+++++.++...... ......+++.+.. .+.
T Consensus 218 ld~~g~-~~~~~~~~~l~~~-G~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~ 292 (326)
T cd08289 218 VDPVGG-KTLAYLLSTLQYG-GSVAVSGLTGG-GEVETTVFPFILRGVNLLGIDSVECP-MELRRRIWRRLAT-DLKPTQ 292 (326)
T ss_pred EECCcH-HHHHHHHHHhhcC-CEEEEEeecCC-CCCCcchhhhhhccceEEEEEeEecC-chHHHHHHHHHHh-hcCccc
Confidence 999998 7889999999997 99999997632 2222222333 578888887532110 1123334443332 222
Q ss_pred CCCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529 320 LEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 352 (354)
Q Consensus 320 ~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~ 352 (354)
....+.+.|+++++.+||+.+.+++. +|+|+++
T Consensus 293 ~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 293 LLNEIKQEITLDELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred cccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence 22345789999999999999988776 5888764
No 102
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=100.00 E-value=6.1e-36 Score=271.93 Aligned_cols=311 Identities=19% Similarity=0.194 Sum_probs=249.7
Q ss_pred cceeeeccCCCc-----eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCC
Q 018529 11 CKAAVAWEAGKP-----LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSD 85 (354)
Q Consensus 11 ~~a~~~~~~~~~-----l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~ 85 (354)
|||+++.+++.+ ++..+.+.|.+.+++|+|++.++++|++|+....+..+....|.++|||++|+|+.+|++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~ 80 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTL 80 (336)
T ss_pred CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCC
Confidence 689999988763 556677888889999999999999999999887665443445778999999999999999999
Q ss_pred CCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhc
Q 018529 86 LEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA 165 (354)
Q Consensus 86 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~ 165 (354)
|++||+|++... ....|+|++|+.++.+.++++|+++++++++.+++.+.+||+++.+.+
T Consensus 81 ~~~Gd~V~~~~~--------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~ 140 (336)
T cd08252 81 FKVGDEVYYAGD--------------------ITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRL 140 (336)
T ss_pred CCCCCEEEEcCC--------------------CCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhc
Confidence 999999986410 013489999999999999999999999999999999999999987778
Q ss_pred CCCC-----CCeEEEEcC-ChhHHHHHHHHHHcC-CcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC
Q 018529 166 KPER-----GSSVAVFGL-GAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG 238 (354)
Q Consensus 166 ~~~~-----~~~vlI~G~-g~~G~~a~~~a~~~g-~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~ 238 (354)
.+.+ |++|+|+|+ |++|++++++|+.+| + +|+++++++++.++++++|++.+++... + +.+.+.....+
T Consensus 141 ~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~--~~~~i~~~~~~ 216 (336)
T cd08252 141 GISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKELGADHVINHHQ-D--LAEQLEALGIE 216 (336)
T ss_pred CCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHhcCCcEEEeCCc-c--HHHHHHhhCCC
Confidence 8887 999999986 999999999999999 7 8999999999999999999988887764 2 66666654434
Q ss_pred CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhh-ccccEEEEEeccCCC--CC-------CCHHH
Q 018529 239 GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYK--PR-------TDLPS 308 (354)
Q Consensus 239 ~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~--~~-------~~~~~ 308 (354)
++|++||++|+...+..++++++.+ |+++.+|... . .+....+ .++.++.+..+.... .. ..+++
T Consensus 217 ~~d~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (336)
T cd08252 217 PVDYIFCLTDTDQHWDAMAELIAPQ-GHICLIVDPQ--E--PLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNE 291 (336)
T ss_pred CCCEEEEccCcHHHHHHHHHHhcCC-CEEEEecCCC--C--cccchhhhcccceEEEEEeeccccccccchhhHHHHHHH
Confidence 8999999999767899999999997 9999998652 1 2222233 467777775543211 11 23677
Q ss_pred HHHHHHccCCCCCCc-eeeeeccccHHHHHHHHhcCCc-eeEEE
Q 018529 309 VVDMYMNKQLELEKF-ITHRIPFSEINKAFEYMVKGEG-LRCII 350 (354)
Q Consensus 309 ~~~~~~~~~~~~~~~-v~~~~~l~~~~~a~~~~~~~~~-~k~vi 350 (354)
+++++.++.+.+... ....++++++.+|++.+.+++. +|+++
T Consensus 292 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~ 335 (336)
T cd08252 292 VADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVL 335 (336)
T ss_pred HHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEe
Confidence 889999997765321 2245799999999999988775 47765
No 103
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=100.00 E-value=8.9e-36 Score=269.40 Aligned_cols=310 Identities=19% Similarity=0.233 Sum_probs=240.6
Q ss_pred ceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCCCCC
Q 018529 12 KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEV 88 (354)
Q Consensus 12 ~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~~~ 88 (354)
||+++...+.+ ++++++|.|.++++||+||+.++++|++|+....|..+. ...|.++|||++|+|+. +++..|++
T Consensus 1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~ 78 (323)
T TIGR02823 1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFRE 78 (323)
T ss_pred CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCC
Confidence 57778777664 789999999999999999999999999999888775432 34588899999999988 55678999
Q ss_pred CCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhh--cC
Q 018529 89 GDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV--AK 166 (354)
Q Consensus 89 Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~--~~ 166 (354)
||+|++..... +....|+|++|+.++++.++++|+++++++++.+++.+.+||+++... .+
T Consensus 79 Gd~V~~~~~~~-----------------~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~ 141 (323)
T TIGR02823 79 GDEVIVTGYGL-----------------GVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNG 141 (323)
T ss_pred CCEEEEccCCC-----------------CCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcC
Confidence 99998753100 011358999999999999999999999999999999999998876433 44
Q ss_pred CCCCC-eEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEE
Q 018529 167 PERGS-SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV 244 (354)
Q Consensus 167 ~~~~~-~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~ 244 (354)
+.+++ +|+|+|+ |.+|.+++++|+.+|+ +++++++++++.+.++++|++.+++..+.+ ..++.+..+++|+++
T Consensus 142 ~~~~~~~vlI~g~~g~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~d~vl 216 (323)
T TIGR02823 142 LTPEDGPVLVTGATGGVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASEVIDREDLS----PPGKPLEKERWAGAV 216 (323)
T ss_pred CCCCCceEEEEcCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcEEEccccHH----HHHHHhcCCCceEEE
Confidence 88998 9999997 9999999999999999 778777888888999999998888765432 244555555799999
Q ss_pred EcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhh-ccccEEEEEeccCCCCCCC----HHHHHHHHHccCCC
Q 018529 245 ECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYKPRTD----LPSVVDMYMNKQLE 319 (354)
Q Consensus 245 d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~----~~~~~~~~~~~~~~ 319 (354)
|++|+ +.+..++++++++ |+++.+|.... .........+ .++.++.+...... ..+. +..+.+++..+.+.
T Consensus 217 d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 292 (323)
T TIGR02823 217 DTVGG-HTLANVLAQLKYG-GAVAACGLAGG-PDLPTTVLPFILRGVSLLGIDSVYC-PMALREAAWQRLATDLKPRNLE 292 (323)
T ss_pred ECccH-HHHHHHHHHhCCC-CEEEEEcccCC-CCccccHHHHhhcceEEEEEecccc-CchhHHHHHHHHHHHhhcCCCc
Confidence 99998 5788999999997 99999987642 2222222333 57888888664321 1122 34455556666554
Q ss_pred CCCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529 320 LEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 352 (354)
Q Consensus 320 ~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~ 352 (354)
. +.+.|+++++++|++.+.+++. +|+|+++
T Consensus 293 ~---~~~~~~l~~~~~a~~~~~~~~~~~k~vv~~ 323 (323)
T TIGR02823 293 S---ITREITLEELPEALEQILAGQHRGRTVVDV 323 (323)
T ss_pred C---ceeeecHHHHHHHHHHHhCCCccceEEEeC
Confidence 3 2468999999999999988776 5888753
No 104
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=4.7e-36 Score=274.23 Aligned_cols=308 Identities=23% Similarity=0.337 Sum_probs=239.4
Q ss_pred cceeeeccCCCc---eEEEEeecCCC-CCCeEEEEEeeeecCccchhhhccCCC---------------CCCCCcccccc
Q 018529 11 CKAAVAWEAGKP---LIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQ---------------TPLFPRIFGHE 71 (354)
Q Consensus 11 ~~a~~~~~~~~~---l~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~~~~~---------------~~~~p~~~G~e 71 (354)
|||+++++++++ +++.+.+.|.| +++||+|||.++++|++|+....+... ....|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 80 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD 80 (350)
T ss_pred CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence 789998888875 88999999998 499999999999999999998876421 23458899999
Q ss_pred eeEEEEEeCCCCCCCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcc
Q 018529 72 AAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILS 151 (354)
Q Consensus 72 ~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~ 151 (354)
++|+|+.+|++++++++||+|++.+.. ...|+|++|+.++++.++++|+++++.+++.++
T Consensus 81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~--------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~ 140 (350)
T cd08248 81 CSGVVVDIGSGVKSFEIGDEVWGAVPP--------------------WSQGTHAEYVVVPENEVSKKPKNLSHEEAASLP 140 (350)
T ss_pred eEEEEEecCCCcccCCCCCEEEEecCC--------------------CCCccceeEEEecHHHeecCCCCCCHHHHhhch
Confidence 999999999999999999999875321 135899999999999999999999999999999
Q ss_pred cchhhhhhhhhhhcCCCC----CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCCh
Q 018529 152 CGVSTGLGATLNVAKPER----GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 226 (354)
Q Consensus 152 ~~~~~a~~~l~~~~~~~~----~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~ 226 (354)
+++.++|+++.+.+.+.+ |++|+|+|+ |++|++++++|+.+|+ .|+++.++ ++.+.++++|.+.+++..+.+
T Consensus 141 ~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~- 217 (350)
T cd08248 141 YAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGA-HVTTTCST-DAIPLVKSLGADDVIDYNNED- 217 (350)
T ss_pred hHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCc-chHHHHHHhCCceEEECCChh-
Confidence 999999999777777654 999999986 9999999999999999 77777654 678888999998888765533
Q ss_pred hHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCce--eec-----c-hhhhc-c-------cc
Q 018529 227 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV--FMT-----K-PINVL-N-------ER 290 (354)
Q Consensus 227 ~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~--~~~-----~-~~~~~-~-------~~ 290 (354)
+.+.+... +++|++||++|+ .....++++++++ |+++.+|....... ... . ...+. . ..
T Consensus 218 -~~~~l~~~--~~vd~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (350)
T cd08248 218 -FEEELTER--GKFDVILDTVGG-DTEKWALKLLKKG-GTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGS 292 (350)
T ss_pred -HHHHHHhc--CCCCEEEECCCh-HHHHHHHHHhccC-CEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCC
Confidence 55544432 379999999998 4889999999997 99999986431111 001 0 00111 0 01
Q ss_pred EEEEEeccCCCCCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEE
Q 018529 291 TLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCII 350 (354)
Q Consensus 291 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi 350 (354)
.+.... .......+.++++++.++.+.+ .+.+.|+++++.++++.+.+++. +|+++
T Consensus 293 ~~~~~~--~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~~vv~ 349 (350)
T cd08248 293 HYRWGF--FSPSGSALDELAKLVEDGKIKP--VIDKVFPFEEVPEAYEKVESGHARGKTVI 349 (350)
T ss_pred CeeEEE--ECCCHHHHHHHHHHHhCCCEec--ccceeecHHHHHHHHHHHhcCCCceEEEe
Confidence 010010 0112345888999999997654 36788999999999999987765 47765
No 105
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=100.00 E-value=7.2e-35 Score=263.58 Aligned_cols=312 Identities=17% Similarity=0.194 Sum_probs=242.6
Q ss_pred cceeeeccCCC--ceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 018529 11 CKAAVAWEAGK--PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE 87 (354)
Q Consensus 11 ~~a~~~~~~~~--~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~~ 87 (354)
|||+++.+++. .+++++.|.|+|+++||+||+.++++|++|+....+.... ..+|.++|||++|+|++ +++++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~ 78 (324)
T cd08288 1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK 78 (324)
T ss_pred CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence 78999998875 3889999999999999999999999999999887765421 33578899999999998 6777899
Q ss_pred CCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhh--hhc
Q 018529 88 VGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL--NVA 165 (354)
Q Consensus 88 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~--~~~ 165 (354)
+||+|++.... .+....|+|++|+.++.+.++++|+++++++++.++++++++++++. +..
T Consensus 79 ~Gd~V~~~~~~-----------------~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~ 141 (324)
T cd08288 79 PGDRVVLTGWG-----------------VGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDH 141 (324)
T ss_pred CCCEEEECCcc-----------------CCCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhc
Confidence 99999875210 00012589999999999999999999999999999999999987643 123
Q ss_pred CCC-CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEE
Q 018529 166 KPE-RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRS 243 (354)
Q Consensus 166 ~~~-~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv 243 (354)
+.. ++++|+|+|+ |++|.+++|+|+.+|+ +|+++++++++.++++++|++.++++.+. ...++.++.+++|.+
T Consensus 142 ~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~----~~~~~~~~~~~~~~~ 216 (324)
T cd08288 142 GVTPGDGPVLVTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASEIIDRAEL----SEPGRPLQKERWAGA 216 (324)
T ss_pred CcCCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCEEEEcchh----hHhhhhhccCcccEE
Confidence 445 6789999997 9999999999999999 78888899999999999999988887653 224555655578999
Q ss_pred EEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhh-ccccEEEEEeccCCCC---CCCHHHHHHHHHccCCC
Q 018529 244 VECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYKP---RTDLPSVVDMYMNKQLE 319 (354)
Q Consensus 244 ~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~---~~~~~~~~~~~~~~~~~ 319 (354)
+|++++ ..+..++..++.+ |+++.+|.... .........+ .++.++.+........ .+.+..+++++..+.+.
T Consensus 217 ~d~~~~-~~~~~~~~~~~~~-g~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (324)
T cd08288 217 VDTVGG-HTLANVLAQTRYG-GAVAACGLAGG-ADLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDLDPALLE 293 (324)
T ss_pred EECCcH-HHHHHHHHHhcCC-CEEEEEEecCC-CCCCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHHhcCCcc
Confidence 999987 5677888899987 99999987532 1112223333 5788888875432211 12345566677777554
Q ss_pred CCCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529 320 LEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 352 (354)
Q Consensus 320 ~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~ 352 (354)
+ +.+.++++++.+|++.+.+++. +|+++++
T Consensus 294 ~---i~~~~~~~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 294 A---LTREIPLADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred c---cceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence 3 3688999999999999988776 5888764
No 106
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=100.00 E-value=1.3e-34 Score=260.74 Aligned_cols=308 Identities=25% Similarity=0.322 Sum_probs=249.2
Q ss_pred ceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018529 12 KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (354)
Q Consensus 12 ~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~G 89 (354)
||+....++.+ +.+.+.+.|.+.++||+|+|.++++|+.|+....+..+. .+|.++|||++|+|+.+|++++++++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~~~G 79 (320)
T cd05286 1 KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL-PLPFVLGVEGAGVVEAVGPGVTGFKVG 79 (320)
T ss_pred CeEEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC-CCCccCCcceeEEEEEECCCCCCCCCC
Confidence 46666655543 666777777788999999999999999999887765433 457789999999999999999999999
Q ss_pred CEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCCCC
Q 018529 90 DHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER 169 (354)
Q Consensus 90 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~ 169 (354)
|+|++.. ..|+|++|+.++.+.++++|+++++.+++.+++.+.++|+++.+..++++
T Consensus 80 ~~V~~~~-----------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~ 136 (320)
T cd05286 80 DRVAYAG-----------------------PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKP 136 (320)
T ss_pred CEEEEec-----------------------CCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCC
Confidence 9998651 15799999999999999999999999999999999999999877889999
Q ss_pred CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEEEcc
Q 018529 170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECT 247 (354)
Q Consensus 170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d~~ 247 (354)
|++|+|+|+ |++|++++++|+.+|+ .|+++++++++.++++++|++.+++..+.+ +.+.+...+.+ ++|++|+|+
T Consensus 137 g~~vlI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vl~~~ 213 (320)
T cd05286 137 GDTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYRDED--FVERVREITGGRGVDVVYDGV 213 (320)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeCCchh--HHHHHHHHcCCCCeeEEEECC
Confidence 999999996 9999999999999999 889998999999999999998888766543 77778887766 899999999
Q ss_pred cChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhh-ccccEEEEEeccCCCCC-----CCHHHHHHHHHccCCCCC
Q 018529 248 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYKPR-----TDLPSVVDMYMNKQLELE 321 (354)
Q Consensus 248 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 321 (354)
++ .....++++++++ |+++.+|..... ...+....+ .+++++.+......... +.+.++++++.++.+.+.
T Consensus 214 ~~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 290 (320)
T cd05286 214 GK-DTFEGSLDSLRPR-GTLVSFGNASGP-VPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVE 290 (320)
T ss_pred Cc-HhHHHHHHhhccC-cEEEEEecCCCC-CCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCc
Confidence 98 6888999999997 999999865422 222233333 46777765543222211 124567788888876654
Q ss_pred CceeeeeccccHHHHHHHHhcCCc-eeEEEe
Q 018529 322 KFITHRIPFSEINKAFEYMVKGEG-LRCIIS 351 (354)
Q Consensus 322 ~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~ 351 (354)
..+.|++++++++++.+.+++. +|++++
T Consensus 291 --~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 319 (320)
T cd05286 291 --IGKRYPLADAAQAHRDLESRKTTGKLLLI 319 (320)
T ss_pred --ccceEcHHHHHHHHHHHHcCCCCceEEEe
Confidence 5678999999999999987765 577765
No 107
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=100.00 E-value=1.1e-34 Score=261.86 Aligned_cols=314 Identities=27% Similarity=0.353 Sum_probs=251.3
Q ss_pred cceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCC-CCCCCcccccceeEEEEEeCCCCCCCC
Q 018529 11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLE 87 (354)
Q Consensus 11 ~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~~~~~~ 87 (354)
||++++..++.+ +++.+.+.|.+.+++|+|++.++++|++|+....+... ....|.++|||++|+|+++|+++++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~ 80 (325)
T cd08253 1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK 80 (325)
T ss_pred CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence 678888876543 77888998889999999999999999999988766443 245688999999999999999999999
Q ss_pred CCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCC
Q 018529 88 VGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKP 167 (354)
Q Consensus 88 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~ 167 (354)
+||+|++..... ....|++++|+.++++.++++|+++++.+++.+++++.+||+++....++
T Consensus 81 ~Gd~v~~~~~~~------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~ 142 (325)
T cd08253 81 VGDRVWLTNLGW------------------GRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGA 142 (325)
T ss_pred CCCEEEEecccc------------------CCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCC
Confidence 999998763100 01257999999999999999999999999999999999999998777899
Q ss_pred CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEEE
Q 018529 168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVE 245 (354)
Q Consensus 168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d 245 (354)
++|++++|+|+ |++|.+++++++..|. .|+++++++++.+.++++|++.+++....+ +.+.+.+...+ ++|++++
T Consensus 143 ~~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~ 219 (325)
T cd08253 143 KAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFNYRAED--LADRILAATAGQGVDVIIE 219 (325)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCCcC--HHHHHHHHcCCCceEEEEE
Confidence 99999999986 9999999999999999 899999999999999999998888776554 77777777665 8999999
Q ss_pred cccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCC---CCCHHHHHHHHHccCCCCC
Q 018529 246 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKP---RTDLPSVVDMYMNKQLELE 321 (354)
Q Consensus 246 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 321 (354)
++|+ ......+++++.+ |+++.++..... ....... +.++.++.+........ .+.++.+.+++..+.+.+.
T Consensus 220 ~~~~-~~~~~~~~~l~~~-g~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 295 (325)
T cd08253 220 VLAN-VNLAKDLDVLAPG-GRIVVYGSGGLR--GTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGALRPV 295 (325)
T ss_pred CCch-HHHHHHHHhhCCC-CEEEEEeecCCc--CCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCccCc
Confidence 9988 5678889999997 999999865411 1222222 34666776655322111 1124455667777765443
Q ss_pred CceeeeeccccHHHHHHHHhcCCc-eeEEEe
Q 018529 322 KFITHRIPFSEINKAFEYMVKGEG-LRCIIS 351 (354)
Q Consensus 322 ~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~ 351 (354)
..+.|+++++.++++.+.+++. +|++++
T Consensus 296 --~~~~~~~~~~~~~~~~~~~~~~~~kvv~~ 324 (325)
T cd08253 296 --IAREYPLEEAAAAHEAVESGGAIGKVVLD 324 (325)
T ss_pred --cccEEcHHHHHHHHHHHHcCCCcceEEEe
Confidence 5688999999999999987665 588775
No 108
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=100.00 E-value=1.4e-34 Score=260.92 Aligned_cols=308 Identities=26% Similarity=0.344 Sum_probs=250.3
Q ss_pred cceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 018529 11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE 87 (354)
Q Consensus 11 ~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~~ 87 (354)
|||+++.+.+.+ +++.+.+.|.+.+++|+||+.++++|+.|+....+..+. ...|.++|||++|+|+++|+++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (323)
T cd05276 1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK 80 (323)
T ss_pred CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence 789999886554 777788888789999999999999999999887664432 34578999999999999999999999
Q ss_pred CCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCC
Q 018529 88 VGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKP 167 (354)
Q Consensus 88 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~ 167 (354)
+||+|++.. ..|+|++|+.++++.++++|+++++.+++.++.++.++|+++.+...+
T Consensus 81 ~Gd~V~~~~-----------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~ 137 (323)
T cd05276 81 VGDRVCALL-----------------------AGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGL 137 (323)
T ss_pred CCCEEEEec-----------------------CCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCC
Confidence 999998651 237999999999999999999999999999999999999998777889
Q ss_pred CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEEE
Q 018529 168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVE 245 (354)
Q Consensus 168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d 245 (354)
.++++|+|+|+ |++|++++++++..|+ .|+++++++++.+.++++|++.+++....+ +.+.+.+.+.+ ++|++|+
T Consensus 138 ~~~~~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~ 214 (323)
T cd05276 138 KAGETVLIHGGASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAINYRTED--FAEEVKEATGGRGVDVILD 214 (323)
T ss_pred CCCCEEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCchh--HHHHHHHHhCCCCeEEEEE
Confidence 99999999997 9999999999999999 789998999999999999988887766543 66777777766 8999999
Q ss_pred cccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhh-ccccEEEEEeccCCCCC-------CCHHHHHHHHHccC
Q 018529 246 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYKPR-------TDLPSVVDMYMNKQ 317 (354)
Q Consensus 246 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~-------~~~~~~~~~~~~~~ 317 (354)
++|+ .....++++++++ |+++.++...... .......+ .+++++.++........ ..+.++++++.+++
T Consensus 215 ~~g~-~~~~~~~~~~~~~-g~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (323)
T cd05276 215 MVGG-DYLARNLRALAPD-GRLVLIGLLGGAK-AELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGR 291 (323)
T ss_pred CCch-HHHHHHHHhhccC-CEEEEEecCCCCC-CCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCC
Confidence 9998 5578899999997 9999998653221 22222323 47888888775432111 12456778888886
Q ss_pred CCCCCceeeeeccccHHHHHHHHhcCCc-eeEE
Q 018529 318 LELEKFITHRIPFSEINKAFEYMVKGEG-LRCI 349 (354)
Q Consensus 318 ~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~v 349 (354)
+.+ ..++.|++++++++++.+.+++. +|++
T Consensus 292 ~~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv 322 (323)
T cd05276 292 IRP--VIDKVFPLEEAAEAHRRMESNEHIGKIV 322 (323)
T ss_pred ccC--CcceEEcHHHHHHHHHHHHhCCCcceEe
Confidence 654 36788999999999999987665 4655
No 109
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=100.00 E-value=4.3e-35 Score=258.00 Aligned_cols=268 Identities=31% Similarity=0.481 Sum_probs=221.4
Q ss_pred eEEEEEeeeecCccchhhhccCCC-CCCCCcccccceeEEEEEeCCCCCCCCCCCEEEecccCCCCCCcccccCCCCCCc
Q 018529 37 EVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPV 115 (354)
Q Consensus 37 evlV~v~~~~i~~~D~~~~~~~~~-~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~ 115 (354)
||+|+|.++++|+.|+....+..+ ...+|.++|||++|+|+++|++++.|++||+|++.+..+|++|.+|.........
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~ 80 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGGGI 80 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCCCE
Confidence 689999999999999998877654 3455789999999999999999999999999999999999999999872223333
Q ss_pred ccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCc
Q 018529 116 NHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGAS 195 (354)
Q Consensus 116 ~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~ 195 (354)
.+....|+|++|+.++.+.++++|+++++++++.+++++.+||+++.....++++++|||+|+|++|++++++++..|.
T Consensus 81 ~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~G~~~~~~a~~~g~- 159 (271)
T cd05188 81 LGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLAKAAGA- 159 (271)
T ss_pred eccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-
Confidence 3444568999999999999999999999999999999999999998777777999999999986699999999999998
Q ss_pred EEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCC
Q 018529 196 RIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 274 (354)
Q Consensus 196 ~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~ 274 (354)
+|+++++++++.+.++++|.+.+++..+.+ +.+.+. ...+ ++|++++++++......++++++++ |+++.++...
T Consensus 160 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~-~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~~~~~ 235 (271)
T cd05188 160 RVIVTDRSDEKLELAKELGADHVIDYKEED--LEEELR-LTGGGGADVVIDAVGGPETLAQALRLLRPG-GRIVVVGGTS 235 (271)
T ss_pred eEEEEcCCHHHHHHHHHhCCceeccCCcCC--HHHHHH-HhcCCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEEccCC
Confidence 899999999999999999988888776654 555555 4444 8999999999867888999999997 9999998765
Q ss_pred CCceeecchhhhccccEEEEEeccCCCCCCCHHHHHHH
Q 018529 275 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDM 312 (354)
Q Consensus 275 ~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 312 (354)
...........+.+++++.++....+ .++++++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 270 (271)
T cd05188 236 GGPPLDDLRRLLFKELTIIGSTGGTR---EDFEEALDL 270 (271)
T ss_pred CCCCcccHHHHHhcceEEEEeecCCH---HHHHHHHhh
Confidence 33322222333558999999876433 356666654
No 110
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=100.00 E-value=1.6e-34 Score=264.13 Aligned_cols=318 Identities=19% Similarity=0.268 Sum_probs=237.2
Q ss_pred cceeeeccCCCceEEEEeecCCC---CCCeEEEEEeeeecCccchhhhccCCCCCC-CCcccccceeEEEEEeCCCCC-C
Q 018529 11 CKAAVAWEAGKPLIIQDVEVAPP---QAMEVRIKIKYTSLCRTDLYFWESKGQTPL-FPRIFGHEAAGVVESVGEGVS-D 85 (354)
Q Consensus 11 ~~a~~~~~~~~~l~~~~~~~p~~---~~~evlV~v~~~~i~~~D~~~~~~~~~~~~-~p~~~G~e~~G~V~~vG~~~~-~ 85 (354)
.|++++.+++.++++++++.|.| ++++|+||+.++++|++|+....+...... .|.++|+|++|+|+++|++++ .
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (352)
T cd08247 1 YKALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASE 80 (352)
T ss_pred CceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccC
Confidence 36889999988888888887776 899999999999999999987654222222 377899999999999999998 8
Q ss_pred CCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeecc----ceEECCCCCCccchhhcccchhhhhhhh
Q 018529 86 LEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSG----CVAKINPLAPLDKVCILSCGVSTGLGAT 161 (354)
Q Consensus 86 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~----~~~~~P~~~~~~~aa~l~~~~~~a~~~l 161 (354)
|++||+|++.....| ...|+|++|++++.. .++++|+++++.+++.+++++.+||+++
T Consensus 81 ~~~Gd~V~~~~~~~~------------------~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l 142 (352)
T cd08247 81 WKVGDEVCGIYPHPY------------------GGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQIL 142 (352)
T ss_pred CCCCCEEEEeecCCC------------------CCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHH
Confidence 999999987632211 135899999999988 7999999999999999999999999997
Q ss_pred hhhc-CCCCCCeEEEEcC-ChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHHhcCCceEEcCCCCCh--hHHHHHHHHc
Q 018529 162 LNVA-KPERGSSVAVFGL-GAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR--PIQEVIAEMT 236 (354)
Q Consensus 162 ~~~~-~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~--~~~~~i~~~~ 236 (354)
.+.. .+++|++|+|+|+ |.+|.+++++|+.+|. +.++++.+ +++.++++++|++.+++..+.++ .+.+.++..+
T Consensus 143 ~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~~-~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~ 221 (352)
T cd08247 143 EDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTCS-SRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVK 221 (352)
T ss_pred HHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEeC-hhHHHHHHHhCCCEEEecCCCcccchHHHHHHhhc
Confidence 6666 7999999999987 8999999999999854 36677754 55566888899988888765431 1333344444
Q ss_pred -CCCccEEEEcccChHhHHHHHHHhh---CCCceEEEEcCCCCCc-ee---------ecchhhhc-----cccEEEEEec
Q 018529 237 -NGGVDRSVECTGNIDNMISAFECVH---DGWGVAVLVGVPSKDA-VF---------MTKPINVL-----NERTLKGTFF 297 (354)
Q Consensus 237 -~~~~dvv~d~~g~~~~~~~~~~~l~---~~~g~~v~~g~~~~~~-~~---------~~~~~~~~-----~~~~i~g~~~ 297 (354)
++++|++|||+|+......++++++ ++ |+++.++...... .. ......+. ....+.....
T Consensus 222 ~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (352)
T cd08247 222 GQGKFDLILDCVGGYDLFPHINSILKPKSKN-GHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFFLL 300 (352)
T ss_pred CCCCceEEEECCCCHHHHHHHHHHhCccCCC-CEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEEEEe
Confidence 3489999999998667888999999 97 9999764221110 00 00011111 2222222111
Q ss_pred cCCCCCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529 298 GNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 352 (354)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~ 352 (354)
.. ..+.+..+++++.++.+.+ ...+.++++++++||+.+.+++. +|+++++
T Consensus 301 -~~-~~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 352 (352)
T cd08247 301 -DP-NADWIEKCAELIADGKVKP--PIDSVYPFEDYKEAFERLKSNRAKGKVVIKV 352 (352)
T ss_pred -cC-CHHHHHHHHHHHhCCCeEe--eeccEecHHHHHHHHHHHHcCCCCCcEEEeC
Confidence 11 1134677889998986653 36788999999999999988775 6888763
No 111
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=100.00 E-value=7.7e-35 Score=263.94 Aligned_cols=305 Identities=19% Similarity=0.245 Sum_probs=240.8
Q ss_pred cceeeeccCCC------ceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC---CCCCcccccceeEEEEEeCC
Q 018529 11 CKAAVAWEAGK------PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT---PLFPRIFGHEAAGVVESVGE 81 (354)
Q Consensus 11 ~~a~~~~~~~~------~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~---~~~p~~~G~e~~G~V~~vG~ 81 (354)
.||+.+.+.++ .+++.+.+.|++.+++|+||+.++++|+.|.....+.... ...+.++|+|++|+|+++|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~ 81 (329)
T cd05288 2 NRQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRS 81 (329)
T ss_pred CcEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCC
Confidence 46777765442 2889999999999999999999999999886655443211 11245789999999999996
Q ss_pred CCCCCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeec-cceEECCCCCC--ccchhh-cccchhhh
Q 018529 82 GVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHS-GCVAKINPLAP--LDKVCI-LSCGVSTG 157 (354)
Q Consensus 82 ~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~-~~~~~~P~~~~--~~~aa~-l~~~~~~a 157 (354)
+ ++++||+|+.. ++|++|+.+++ +.++++|++++ +.+++. +++++.+|
T Consensus 82 ~--~~~~Gd~V~~~--------------------------~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta 133 (329)
T cd05288 82 P--DFKVGDLVSGF--------------------------LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTA 133 (329)
T ss_pred C--CCCCCCEEecc--------------------------cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHH
Confidence 4 79999999854 48999999999 99999999985 555555 88899999
Q ss_pred hhhhhhhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCceEEcCCCCChhHHHHHHHH
Q 018529 158 LGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEM 235 (354)
Q Consensus 158 ~~~l~~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~i~~~ 235 (354)
|+++.....+.++++|||+|+ |++|++++++|+..|+ +|+++++++++.+.+++ +|++.++++.+.+ +.+.+.+.
T Consensus 134 ~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~v~~~ 210 (329)
T cd05288 134 YFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWLVEELGFDAAINYKTPD--LAEALKEA 210 (329)
T ss_pred HHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhhcCCceEEecCChh--HHHHHHHh
Confidence 999877788999999999985 9999999999999999 89999999999999988 9998888877654 77777777
Q ss_pred cCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceee----c-chhhhccccEEEEEeccCCCC--CCCHHH
Q 018529 236 TNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFM----T-KPINVLNERTLKGTFFGNYKP--RTDLPS 308 (354)
Q Consensus 236 ~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~----~-~~~~~~~~~~i~g~~~~~~~~--~~~~~~ 308 (354)
+++++|++||++|+ ..+..++++++++ |+++.+|......... . ....+.++.++.++....... .+.+.+
T Consensus 211 ~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (329)
T cd05288 211 APDGIDVYFDNVGG-EILDAALTLLNKG-GRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAE 288 (329)
T ss_pred ccCCceEEEEcchH-HHHHHHHHhcCCC-ceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHH
Confidence 75689999999998 6889999999997 9999998654321111 1 222345788888766533211 134677
Q ss_pred HHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEE
Q 018529 309 VVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCII 350 (354)
Q Consensus 309 ~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi 350 (354)
+++++.++.+.+.+ ...++++++.++++.+.+++. +|+++
T Consensus 289 ~~~~~~~g~i~~~~--~~~~~l~~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 289 LAKWLAEGKLKYRE--DVVEGLENAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred HHHHHHCCCccccc--cccccHHHHHHHHHHHhcCCCccceeC
Confidence 88999999877653 355899999999999987765 46653
No 112
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=9.5e-35 Score=262.71 Aligned_cols=312 Identities=24% Similarity=0.331 Sum_probs=247.0
Q ss_pred cceeeeccCC--CceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 018529 11 CKAAVAWEAG--KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV 88 (354)
Q Consensus 11 ~~a~~~~~~~--~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 88 (354)
|||+++.+++ +.+++++.+.|++.+++|+||+.++++|++|+....+......+|.++|||++|+|+.+|++++++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~ 80 (325)
T cd08271 1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKV 80 (325)
T ss_pred CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCC
Confidence 7999999988 35999999999999999999999999999999887665433344778999999999999999999999
Q ss_pred CCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCCC
Q 018529 89 GDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE 168 (354)
Q Consensus 89 Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~ 168 (354)
||+|++.... ...|+|++|+.++++.++++|+++++.+++.+.+.+.++|+++.+.+.++
T Consensus 81 Gd~V~~~~~~--------------------~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~ 140 (325)
T cd08271 81 GDRVAYHASL--------------------ARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIE 140 (325)
T ss_pred CCEEEeccCC--------------------CCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCC
Confidence 9999876211 12479999999999999999999999999999999999999987888999
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEEEc
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVEC 246 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d~ 246 (354)
+|++++|+|+ |.+|++++++|+..|+ .|+++. ++++.+.++++|++.+++....+ +.+.+++..++ ++|+++++
T Consensus 141 ~g~~vlI~g~~~~ig~~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~ 216 (325)
T cd08271 141 AGRTILITGGAGGVGSFAVQLAKRAGL-RVITTC-SKRNFEYVKSLGADHVIDYNDED--VCERIKEITGGRGVDAVLDT 216 (325)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEE-cHHHHHHHHHcCCcEEecCCCcc--HHHHHHHHcCCCCCcEEEEC
Confidence 9999999998 8999999999999999 677775 67788888889998888766554 66778877766 89999999
Q ss_pred ccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchh---hhccccEEEEEeccCC-----CCCCCHHHHHHHHHccCC
Q 018529 247 TGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI---NVLNERTLKGTFFGNY-----KPRTDLPSVVDMYMNKQL 318 (354)
Q Consensus 247 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~---~~~~~~~i~g~~~~~~-----~~~~~~~~~~~~~~~~~~ 318 (354)
+++ .....++++++++ |+++.++...... ..... ...+++.+.+...... ..++.+.++++++.++.+
T Consensus 217 ~~~-~~~~~~~~~l~~~-G~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 292 (325)
T cd08271 217 VGG-ETAAALAPTLAFN-GHLVCIQGRPDAS--PDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKL 292 (325)
T ss_pred CCc-HhHHHHHHhhccC-CEEEEEcCCCCCc--chhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCe
Confidence 998 4567789999997 9999887543221 11111 1113333333321111 111235678888888876
Q ss_pred CCCCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529 319 ELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 352 (354)
Q Consensus 319 ~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~ 352 (354)
.+. ..+.|+++++.++++.+.+++. +|+++++
T Consensus 293 ~~~--~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 293 EPL--VIEVLPFEQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred eec--cceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence 543 4588999999999999987765 5888763
No 113
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.5e-34 Score=262.24 Aligned_cols=305 Identities=22% Similarity=0.308 Sum_probs=238.7
Q ss_pred ceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCCCCC
Q 018529 12 KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEV 88 (354)
Q Consensus 12 ~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~~~ 88 (354)
||+.+...+.+ +++.+.+.|.|.++||+|++.++++|++|+.+..+..+. ..+|.++|||++|+|+.+|++++.|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~ 81 (331)
T cd08273 2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEV 81 (331)
T ss_pred eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCCC
Confidence 78888887654 888899999999999999999999999999988775533 346889999999999999999999999
Q ss_pred CCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCCC
Q 018529 89 GDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE 168 (354)
Q Consensus 89 Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~ 168 (354)
||+|++.. ..|+|++|+.++++.++++|+++++.+++.+++++.+||+++.+...++
T Consensus 82 Gd~V~~~~-----------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~ 138 (331)
T cd08273 82 GDRVAALT-----------------------RVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVL 138 (331)
T ss_pred CCEEEEeC-----------------------CCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCC
Confidence 99998752 1379999999999999999999999999999999999999987778899
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 247 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~ 247 (354)
++++|+|+|+ |.+|++++++|+..|+ +|++++. +++.++++++|+.. ++....+ +.+. ...++++|++++++
T Consensus 139 ~g~~vlI~g~~g~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~~~~~~--~~~~--~~~~~~~d~vl~~~ 211 (331)
T cd08273 139 TGQRVLIHGASGGVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-IDYRTKD--WLPA--MLTPGGVDVVFDGV 211 (331)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-EcCCCcc--hhhh--hccCCCceEEEECC
Confidence 9999999997 9999999999999999 7888877 88889999999753 4444333 3333 33345899999999
Q ss_pred cChHhHHHHHHHhhCCCceEEEEcCCCCCceeecc---------------hhhhccccEEEEEeccCC----CCCCCHHH
Q 018529 248 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK---------------PINVLNERTLKGTFFGNY----KPRTDLPS 308 (354)
Q Consensus 248 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~---------------~~~~~~~~~i~g~~~~~~----~~~~~~~~ 308 (354)
|+. ....++++++.+ |+++.+|........... ...+.+..++.+...... ...+.+++
T Consensus 212 ~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 289 (331)
T cd08273 212 GGE-SYEESYAALAPG-GTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTE 289 (331)
T ss_pred chH-HHHHHHHHhcCC-CEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHH
Confidence 984 588999999997 999999875432211111 000112233322222100 01235778
Q ss_pred HHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEE
Q 018529 309 VVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCII 350 (354)
Q Consensus 309 ~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi 350 (354)
+++++.++.+.+ .+.+.+++++++++++.+.+++. +|+|+
T Consensus 290 ~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 290 LLDLLAKGKIRP--KIAKRLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred HHHHHHCCCccC--CcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence 889999997654 36788999999999999887765 46664
No 114
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3.4e-34 Score=259.09 Aligned_cols=311 Identities=25% Similarity=0.331 Sum_probs=249.3
Q ss_pred cceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 018529 11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE 87 (354)
Q Consensus 11 ~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~~ 87 (354)
|||+++..++.+ +++.+.+.|.+.+++|+|++.++++|++|+....+.... ...|.++|||++|+|+.+|+++.+|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (326)
T cd08272 1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR 80 (326)
T ss_pred CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence 689999888765 778888888889999999999999999999887664331 23477899999999999999999999
Q ss_pred CCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCC
Q 018529 88 VGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKP 167 (354)
Q Consensus 88 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~ 167 (354)
+||+|++.... . ....|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++.+..++
T Consensus 81 ~Gd~V~~~~~~-----------~-------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~ 142 (326)
T cd08272 81 VGDEVYGCAGG-----------L-------GGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAV 142 (326)
T ss_pred CCCEEEEccCC-----------c-------CCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCC
Confidence 99999875210 0 01257899999999999999999999999999999999999998788999
Q ss_pred CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEEE
Q 018529 168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVE 245 (354)
Q Consensus 168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d 245 (354)
+++++++|+|+ |.+|++++++|+..|+ .|++++++ ++.++++++|.+.+++... . +.+.+.+.+.+ ++|+++|
T Consensus 143 ~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~--~-~~~~~~~~~~~~~~d~v~~ 217 (326)
T cd08272 143 QAGQTVLIHGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPIIYYRE--T-VVEYVAEHTGGRGFDVVFD 217 (326)
T ss_pred CCCCEEEEEcCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEEEecch--h-HHHHHHHhcCCCCCcEEEE
Confidence 99999999985 9999999999999999 78888888 8899999999987776543 2 66677777776 8999999
Q ss_pred cccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccC--C---C---CCCCHHHHHHHHHccC
Q 018529 246 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN--Y---K---PRTDLPSVVDMYMNKQ 317 (354)
Q Consensus 246 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~--~---~---~~~~~~~~~~~~~~~~ 317 (354)
++++ ..+..++++++++ |+++.++... . ...... ..+++++.+..... . . ..+.+..+++++.++.
T Consensus 218 ~~~~-~~~~~~~~~l~~~-g~~v~~~~~~-~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 291 (326)
T cd08272 218 TVGG-ETLDASFEAVALY-GRVVSILGGA-T--HDLAPL-SFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQ 291 (326)
T ss_pred CCCh-HHHHHHHHHhccC-CEEEEEecCC-c--cchhhH-hhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCC
Confidence 9998 6788899999997 9999987653 1 122222 24677777665332 1 0 1124667888888886
Q ss_pred CCCCCcee-eeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529 318 LELEKFIT-HRIPFSEINKAFEYMVKGEG-LRCIISM 352 (354)
Q Consensus 318 ~~~~~~v~-~~~~l~~~~~a~~~~~~~~~-~k~vi~~ 352 (354)
+.. .++ +.|+++++.++++.+.+++. +|+++++
T Consensus 292 l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 292 LRP--LLDPRTFPLEEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred ccc--ccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence 653 234 88999999999999887664 5888764
No 115
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=100.00 E-value=4.5e-33 Score=251.51 Aligned_cols=311 Identities=24% Similarity=0.315 Sum_probs=251.0
Q ss_pred cceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 018529 11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE 87 (354)
Q Consensus 11 ~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~~ 87 (354)
|||+.+..++.+ +++.+.+.|.+++++++|++.++++|+.|+....+..+. ..+|.++|||++|+|+.+|+++.+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (325)
T TIGR02824 1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK 80 (325)
T ss_pred CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCC
Confidence 678888776655 666777777789999999999999999998887654332 23467899999999999999999999
Q ss_pred CCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCC
Q 018529 88 VGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKP 167 (354)
Q Consensus 88 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~ 167 (354)
+||+|++. ...|+|++|+.++.+.++++|+++++.+++.+++++.++|+++.+...+
T Consensus 81 ~Gd~V~~~-----------------------~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~ 137 (325)
T TIGR02824 81 VGDRVCAL-----------------------VAGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGL 137 (325)
T ss_pred CCCEEEEc-----------------------cCCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCC
Confidence 99999865 1237999999999999999999999999999999999999987788899
Q ss_pred CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEEE
Q 018529 168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVE 245 (354)
Q Consensus 168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d 245 (354)
+++++++|+|+ |++|.+++++++..|+ +|+++.+++++.+.++++|++.+++....+ +.+.+....++ ++|++++
T Consensus 138 ~~~~~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~~i~ 214 (325)
T TIGR02824 138 KAGETVLIHGGASGIGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAINYREED--FVEVVKAETGGKGVDVILD 214 (325)
T ss_pred CCCCEEEEEcCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecCchh--HHHHHHHHcCCCCeEEEEE
Confidence 99999999996 9999999999999999 888898999999999889988777665543 66777777766 8999999
Q ss_pred cccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhh-ccccEEEEEeccCCCCC-------CCHHHHHHHHHccC
Q 018529 246 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYKPR-------TDLPSVVDMYMNKQ 317 (354)
Q Consensus 246 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~-------~~~~~~~~~~~~~~ 317 (354)
++|+ .....++++++++ |+++.++....... ......+ .+++++.+......... ..+.++++++.++.
T Consensus 215 ~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (325)
T TIGR02824 215 IVGG-SYLNRNIKALALD-GRIVQIGFQGGRKA-ELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGR 291 (325)
T ss_pred CCch-HHHHHHHHhhccC-cEEEEEecCCCCcC-CCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCc
Confidence 9987 5788899999997 99999986542211 3333333 58999998875442111 12355677888886
Q ss_pred CCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529 318 LELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 352 (354)
Q Consensus 318 ~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~ 352 (354)
+.+ ..++.++++++.++++.+.+++. +|+++++
T Consensus 292 l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 325 (325)
T TIGR02824 292 VRP--VIDKVFPLEDAAQAHALMESGDHIGKIVLTV 325 (325)
T ss_pred ccC--ccccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence 553 36788999999999999887765 5877753
No 116
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=100.00 E-value=2.2e-33 Score=251.12 Aligned_cols=291 Identities=25% Similarity=0.370 Sum_probs=233.0
Q ss_pred cCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCCCCCCCEEEecccCCCCCCccccc
Q 018529 30 VAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRF 108 (354)
Q Consensus 30 ~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~c~~c~~ 108 (354)
.|++.+++++||+.++++|+.|+....+..+. ..+|.++|+|++|+|+++|+++++|++||+|++...
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~----------- 70 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTG----------- 70 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecC-----------
Confidence 57788999999999999999999988775432 346889999999999999999999999999987621
Q ss_pred CCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcC-ChhHHHHHH
Q 018529 109 SINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAE 187 (354)
Q Consensus 109 ~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~-g~~G~~a~~ 187 (354)
...|+|++|+.++++.++++|+++++.+++.+++++.+||+++ +...+++|++++|+|+ |.+|.+++|
T Consensus 71 ----------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~g~~vli~~~~~~~g~~~~~ 139 (303)
T cd08251 71 ----------ESMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF-ARAGLAKGEHILIQTATGGTGLMAVQ 139 (303)
T ss_pred ----------CCCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-HhcCCCCCCEEEEecCCcHHHHHHHH
Confidence 1347999999999999999999999999999999999999986 5789999999999975 999999999
Q ss_pred HHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEEEcccChHhHHHHHHHhhCCCce
Q 018529 188 GARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGV 266 (354)
Q Consensus 188 ~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~ 266 (354)
+|+.+|+ +|+++++++++.+.++++|++.+++....+ +.+.+.+++++ ++|+++|++++ ......+++++++ |+
T Consensus 140 ~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~i~~~~~~~~~d~v~~~~~~-~~~~~~~~~l~~~-g~ 214 (303)
T cd08251 140 LARLKGA-EIYATASSDDKLEYLKQLGVPHVINYVEED--FEEEIMRLTGGRGVDVVINTLSG-EAIQKGLNCLAPG-GR 214 (303)
T ss_pred HHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCCcc--HHHHHHHHcCCCCceEEEECCcH-HHHHHHHHHhccC-cE
Confidence 9999999 899999999999999999999888876654 77778888776 89999999976 6888899999997 99
Q ss_pred EEEEcCCCCCceeecchhhhccccEEEEEeccCCC------CCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHH
Q 018529 267 AVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK------PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYM 340 (354)
Q Consensus 267 ~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~ 340 (354)
++.++..............+.++..+....+.... ..+.+.++++++.++.+++. ..+.|+++++.++++.+
T Consensus 215 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~ 292 (303)
T cd08251 215 YVEIAMTALKSAPSVDLSVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPT--VSRIFPFDDIGEAYRYL 292 (303)
T ss_pred EEEEeccCCCccCccChhHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccCC--CceEEcHHHHHHHHHHH
Confidence 99987653221112222223334443332221110 01236678888888866543 56889999999999999
Q ss_pred hcCCc-eeEE
Q 018529 341 VKGEG-LRCI 349 (354)
Q Consensus 341 ~~~~~-~k~v 349 (354)
.+++. +|++
T Consensus 293 ~~~~~~~~iv 302 (303)
T cd08251 293 SDRENIGKVV 302 (303)
T ss_pred HhCCCcceEe
Confidence 87765 4655
No 117
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3.9e-33 Score=252.24 Aligned_cols=315 Identities=27% Similarity=0.382 Sum_probs=249.5
Q ss_pred cceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 018529 11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE 87 (354)
Q Consensus 11 ~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~~ 87 (354)
|||+.+.+.+.+ +++.+.+.|.+.+++++|+|.++++|+.|+....+.... ..+|.++|||++|+|+.+|+++.+|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (328)
T cd08268 1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFA 80 (328)
T ss_pred CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCC
Confidence 678888876543 777788888889999999999999999999887664332 34477899999999999999999999
Q ss_pred CCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCC
Q 018529 88 VGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKP 167 (354)
Q Consensus 88 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~ 167 (354)
+||+|++.+... ....|++++|+.++++.++++|+++++.+++.+++++.++|+++.....+
T Consensus 81 ~Gd~V~~~~~~~------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 142 (328)
T cd08268 81 VGDRVSVIPAAD------------------LGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGL 142 (328)
T ss_pred CCCEEEeccccc------------------cCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCC
Confidence 999998763211 11347999999999999999999999999999999999999998778889
Q ss_pred CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEEE
Q 018529 168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVE 245 (354)
Q Consensus 168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d 245 (354)
.++++++|+|+ |.+|++++++++..|+ .++.++++.++.+.++++|.+.+++....+ +.+.+.+...+ ++|++++
T Consensus 143 ~~~~~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~ 219 (328)
T cd08268 143 RPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIVTDEED--LVAEVLRITGGKGVDVVFD 219 (328)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEecCCcc--HHHHHHHHhCCCCceEEEE
Confidence 99999999987 9999999999999999 888888999999999889988888766544 66777777766 8999999
Q ss_pred cccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchh-hhccccEEEEEeccCCCC-CCC----HHHHHHHHHccCCC
Q 018529 246 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYKP-RTD----LPSVVDMYMNKQLE 319 (354)
Q Consensus 246 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~-~~~----~~~~~~~~~~~~~~ 319 (354)
++|+ .....++++++++ |+++.+|..... ....... .+.++.++.+........ ..+ ++.+.+++..+.+.
T Consensus 220 ~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (328)
T cd08268 220 PVGG-PQFAKLADALAPG-GTLVVYGALSGE-PTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASGALK 296 (328)
T ss_pred CCch-HhHHHHHHhhccC-CEEEEEEeCCCC-CCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHHCCCCc
Confidence 9998 6788899999997 999999865421 1122222 345788887765432111 112 33444556666555
Q ss_pred CCCceeeeeccccHHHHHHHHhcCCc-eeEEEe
Q 018529 320 LEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 351 (354)
Q Consensus 320 ~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~ 351 (354)
+. ..+.|+++++.++++.+.+++. +|+|++
T Consensus 297 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~vv~~ 327 (328)
T cd08268 297 PV--VDRVFPFDDIVEAHRYLESGQQIGKIVVT 327 (328)
T ss_pred CC--cccEEcHHHHHHHHHHHHcCCCCceEEEe
Confidence 43 5678999999999999887765 588875
No 118
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=100.00 E-value=2.8e-33 Score=251.10 Aligned_cols=300 Identities=23% Similarity=0.336 Sum_probs=239.9
Q ss_pred cceeeeccCCCc--eEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCC---CCCCCcccccceeEEEEEeCCCCCC
Q 018529 11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESVGEGVSD 85 (354)
Q Consensus 11 ~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~---~~~~p~~~G~e~~G~V~~vG~~~~~ 85 (354)
|||+++..++.. +++.+.+.|+++++||+|++.++++|+.|+..+.+... ....|.++|||++|+|+.+|+++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~ 80 (309)
T cd05289 1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG 80 (309)
T ss_pred CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence 688888877664 56677788888999999999999999999988766432 2345788999999999999999999
Q ss_pred CCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhc
Q 018529 86 LEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA 165 (354)
Q Consensus 86 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~ 165 (354)
+++||+|++.+.. ...|+|++|+.++.+.++++|+++++..++.+++.+.++|+++....
T Consensus 81 ~~~G~~V~~~~~~--------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~ 140 (309)
T cd05289 81 FKVGDEVFGMTPF--------------------TRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELG 140 (309)
T ss_pred CCCCCEEEEccCC--------------------CCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhc
Confidence 9999999876311 12479999999999999999999999999999999999999977777
Q ss_pred CCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEE
Q 018529 166 KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRS 243 (354)
Q Consensus 166 ~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv 243 (354)
.+.++++|+|+|+ |.+|++++++++..|+ .|++++.++ +.++++++|.+.+++....+ +.+ ...+ ++|++
T Consensus 141 ~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~-~~~~~~~~g~~~~~~~~~~~--~~~----~~~~~~~d~v 212 (309)
T cd05289 141 GLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIATASAA-NADFLRSLGADEVIDYTKGD--FER----AAAPGGVDAV 212 (309)
T ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecch-hHHHHHHcCCCEEEeCCCCc--hhh----ccCCCCceEE
Confidence 7999999999997 9999999999999999 778777777 88888889988887766544 332 2333 89999
Q ss_pred EEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCc
Q 018529 244 VECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKF 323 (354)
Q Consensus 244 ~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (354)
++++|+ .....++++++++ |+++.+|...... . ..+.++.++........ ...+..+++++.++.+.+ .
T Consensus 213 ~~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~--~---~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--~ 281 (309)
T cd05289 213 LDTVGG-ETLARSLALVKPG-GRLVSIAGPPPAE--Q---AAKRRGVRAGFVFVEPD--GEQLAELAELVEAGKLRP--V 281 (309)
T ss_pred EECCch-HHHHHHHHHHhcC-cEEEEEcCCCcch--h---hhhhccceEEEEEeccc--HHHHHHHHHHHHCCCEEE--e
Confidence 999998 4888999999997 9999998654211 1 22335555555443221 346888899998886543 3
Q ss_pred eeeeeccccHHHHHHHHhcCCc-eeEE
Q 018529 324 ITHRIPFSEINKAFEYMVKGEG-LRCI 349 (354)
Q Consensus 324 v~~~~~l~~~~~a~~~~~~~~~-~k~v 349 (354)
+++.|+++++.++++.+.+++. +|++
T Consensus 282 ~~~~~~~~~~~~a~~~~~~~~~~~kvv 308 (309)
T cd05289 282 VDRVFPLEDAAEAHERLESGHARGKVV 308 (309)
T ss_pred eccEEcHHHHHHHHHHHHhCCCCCcEe
Confidence 6788999999999999887665 4655
No 119
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=100.00 E-value=1.5e-32 Score=247.89 Aligned_cols=309 Identities=28% Similarity=0.477 Sum_probs=249.0
Q ss_pred cceeeeccCCCc--eEEEEeecCCCC-CCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCCC
Q 018529 11 CKAAVAWEAGKP--LIIQDVEVAPPQ-AMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDL 86 (354)
Q Consensus 11 ~~a~~~~~~~~~--l~~~~~~~p~~~-~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~ 86 (354)
|+|+++..++.+ +++.+.+ |.+. +++++|++.++++|+.|+....+.... ...|.++|||++|+|+.+|+++..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~ 79 (323)
T cd08241 1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF 79 (323)
T ss_pred CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence 688888755443 6777777 6665 599999999999999999887765432 3346789999999999999999999
Q ss_pred CCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcC
Q 018529 87 EVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK 166 (354)
Q Consensus 87 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~ 166 (354)
++||+|++.. ..|++++|+.++.+.++++|+++++.+++.+..++.+||+++.+...
T Consensus 80 ~~G~~V~~~~-----------------------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~ 136 (323)
T cd08241 80 KVGDRVVALT-----------------------GQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRAR 136 (323)
T ss_pred CCCCEEEEec-----------------------CCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcC
Confidence 9999999761 15799999999999999999999999998898899999998777788
Q ss_pred CCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEE
Q 018529 167 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSV 244 (354)
Q Consensus 167 ~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~ 244 (354)
++++++|+|+|+ |++|++++++|+..|+ .|+++++++++.++++++|++.+++....+ +.+.+...+++ ++|.++
T Consensus 137 ~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~i~~~~~~~~~d~v~ 213 (323)
T cd08241 137 LQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVIDYRDPD--LRERVKALTGGRGVDVVY 213 (323)
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCceeeecCCcc--HHHHHHHHcCCCCcEEEE
Confidence 999999999998 9999999999999999 799998999999999999988877766544 77778888776 899999
Q ss_pred EcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecch-hhhccccEEEEEeccCCCCC------CCHHHHHHHHHccC
Q 018529 245 ECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFGNYKPR------TDLPSVVDMYMNKQ 317 (354)
Q Consensus 245 d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~~~~~~~------~~~~~~~~~~~~~~ 317 (354)
+++|+ .....++++++++ |+++.++....... .+.. ..+.+++++.+.....+... +.+.++++++.++.
T Consensus 214 ~~~g~-~~~~~~~~~~~~~-g~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (323)
T cd08241 214 DPVGG-DVFEASLRSLAWG-GRLLVIGFASGEIP-QIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGK 290 (323)
T ss_pred ECccH-HHHHHHHHhhccC-CEEEEEccCCCCcC-cCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCC
Confidence 99998 7888899999997 99999986532211 1112 22447888888765433211 24667888888886
Q ss_pred CCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEe
Q 018529 318 LELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 351 (354)
Q Consensus 318 ~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~ 351 (354)
+.+ ..++.|+++++.++++.+.+++. +|++++
T Consensus 291 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~vvv~ 323 (323)
T cd08241 291 IRP--HVSAVFPLEQAAEALRALADRKATGKVVLT 323 (323)
T ss_pred ccc--ccceEEcHHHHHHHHHHHHhCCCCCcEEeC
Confidence 643 36788999999999998877665 577653
No 120
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=4.7e-32 Score=246.34 Aligned_cols=310 Identities=22% Similarity=0.335 Sum_probs=242.7
Q ss_pred ceeeeccCCC--ceEEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCCC-CCCCcccccceeEEEEEeCCCCCCCCC
Q 018529 12 KAAVAWEAGK--PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEV 88 (354)
Q Consensus 12 ~a~~~~~~~~--~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~~~ 88 (354)
||+.+...+. .+++.+.+.|.+++++|+||+.++++|+.|+....+.... ...|.++|||++|+|+.+|++++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~ 80 (337)
T cd08275 1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKV 80 (337)
T ss_pred CeEEEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCC
Confidence 4555555543 2777788888889999999999999999999988765432 345778999999999999999999999
Q ss_pred CCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCCC
Q 018529 89 GDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE 168 (354)
Q Consensus 89 Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~ 168 (354)
||+|++.. ..|+|++|+.++.+.++++|+.+++.+++.+++++.++|+++.+...++
T Consensus 81 G~~V~~~~-----------------------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 137 (337)
T cd08275 81 GDRVMGLT-----------------------RFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLR 137 (337)
T ss_pred CCEEEEec-----------------------CCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCC
Confidence 99999751 2379999999999999999999999999999999999999987888999
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHc-CCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 246 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~-g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~ 246 (354)
++++|+|+|+ |.+|++++++|+.. +. .++.. ..+++.++++++|++.+++....+ +.+.++..+++++|+++|+
T Consensus 138 ~~~~vli~g~~g~~g~~~~~~a~~~~~~-~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~d~v~~~ 213 (337)
T cd08275 138 PGQSVLVHSAAGGVGLAAGQLCKTVPNV-TVVGT-ASASKHEALKENGVTHVIDYRTQD--YVEEVKKISPEGVDIVLDA 213 (337)
T ss_pred CCCEEEEEcCcchHHHHHHHHHHHccCc-EEEEe-CCHHHHHHHHHcCCcEEeeCCCCc--HHHHHHHHhCCCceEEEEC
Confidence 9999999997 99999999999998 33 33322 345578888889998888776654 7777877775689999999
Q ss_pred ccChHhHHHHHHHhhCCCceEEEEcCCCCCc--eee-------------cc-hhhhccccEEEEEeccCCCCC-----CC
Q 018529 247 TGNIDNMISAFECVHDGWGVAVLVGVPSKDA--VFM-------------TK-PINVLNERTLKGTFFGNYKPR-----TD 305 (354)
Q Consensus 247 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~--~~~-------------~~-~~~~~~~~~i~g~~~~~~~~~-----~~ 305 (354)
+|+ .....++++++++ |+++.+|...... ... .. ...+.+++++.++........ ..
T Consensus 214 ~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (337)
T cd08275 214 LGG-EDTRKSYDLLKPM-GRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEV 291 (337)
T ss_pred CcH-HHHHHHHHhhccC-cEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHH
Confidence 998 5778899999997 9999998653211 111 01 122347888888765322111 12
Q ss_pred HHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEEec
Q 018529 306 LPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 352 (354)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~ 352 (354)
+.++++++.++.+.+. ..+.|++++++++++.+.+++. +|+++++
T Consensus 292 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 292 MDKLLKLYEEGKIKPK--IDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred HHHHHHHHHCCCCCCc--eeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 5678888888865543 5688999999999999987765 5888764
No 121
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=7.3e-32 Score=243.21 Aligned_cols=294 Identities=23% Similarity=0.312 Sum_probs=225.4
Q ss_pred EEEEeecCCCCCCeEEEEEeeeecCccchhhhccCCC---CCCCCcccccceeEEEEEeCCCCCCCCCCCEEEecccCCC
Q 018529 24 IIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGEC 100 (354)
Q Consensus 24 ~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~~~~~---~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~ 100 (354)
++.+.+.|+++++||+|++.++++|++|+....+... ....|.++|||++|+|+++|++++++++||+|++....
T Consensus 15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~-- 92 (319)
T cd08267 15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPP-- 92 (319)
T ss_pred ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccC--
Confidence 7788899999999999999999999999988766432 12346789999999999999999999999999876221
Q ss_pred CCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcC-C
Q 018529 101 GDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-G 179 (354)
Q Consensus 101 ~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~-g 179 (354)
...|+|++|+.++.+.++++|+++++.+++.+++++.+||+++.....++++++|+|+|+ |
T Consensus 93 ------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g 154 (319)
T cd08267 93 ------------------KGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASG 154 (319)
T ss_pred ------------------CCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCc
Confidence 124789999999999999999999999999999999999999777777999999999997 9
Q ss_pred hhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEEEcccCh-HhHHHHH
Q 018529 180 AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNI-DNMISAF 257 (354)
Q Consensus 180 ~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d~~g~~-~~~~~~~ 257 (354)
++|++++++|+..|+ +|++++++ ++.+.++++|.+.+++....+ +. ...+.+ ++|++++|+|+. ......+
T Consensus 155 ~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~--~~---~~~~~~~~~d~vi~~~~~~~~~~~~~~ 227 (319)
T cd08267 155 GVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYTTED--FV---ALTAGGEKYDVIFDAVGNSPFSLYRAS 227 (319)
T ss_pred HHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCCCCC--cc---hhccCCCCCcEEEECCCchHHHHHHhh
Confidence 999999999999999 78888765 888888999998888766543 32 334444 899999999852 2333444
Q ss_pred HHhhCCCceEEEEcCCCCCceeec---chhhhccccEEEEEeccCCCCCCCHHHHHHHHHccCCCCCCceeeeeccccHH
Q 018529 258 ECVHDGWGVAVLVGVPSKDAVFMT---KPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 334 (354)
Q Consensus 258 ~~l~~~~g~~v~~g~~~~~~~~~~---~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~ 334 (354)
..++++ |+++.+|.......... ..........+....... ..+.+.++++++.++++.+ .+++.|+++++.
T Consensus 228 ~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~i~ 302 (319)
T cd08267 228 LALKPG-GRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKP--NAEDLEQLAELVEEGKLKP--VIDSVYPLEDAP 302 (319)
T ss_pred hccCCC-CEEEEeccccccccccccccchhhccccceEEEEEecC--CHHHHHHHHHHHHCCCeee--eeeeEEcHHHHH
Confidence 458997 99999987543222111 011111122222222111 1456888999999887654 367889999999
Q ss_pred HHHHHHhcCCc-eeEE
Q 018529 335 KAFEYMVKGEG-LRCI 349 (354)
Q Consensus 335 ~a~~~~~~~~~-~k~v 349 (354)
+|++.+.+++. +|++
T Consensus 303 ~a~~~~~~~~~~~~vv 318 (319)
T cd08267 303 EAYRRLKSGRARGKVV 318 (319)
T ss_pred HHHHHHhcCCCCCcEe
Confidence 99999987665 4655
No 122
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=100.00 E-value=1.1e-31 Score=238.53 Aligned_cols=281 Identities=22% Similarity=0.285 Sum_probs=227.4
Q ss_pred CeEEEEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEecccCCCCCCcccccCCCCCCc
Q 018529 36 MEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPV 115 (354)
Q Consensus 36 ~evlV~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~ 115 (354)
+|++||+.++++|++|+....+.. ..+|.++|||++|+|+++|++++++++||+|++.
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~--~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~-------------------- 58 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLL--PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGL-------------------- 58 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCC--CCCCCccceeeeEEEEeecCCccCCCCCCEEEEE--------------------
Confidence 589999999999999999887643 2357889999999999999999999999999865
Q ss_pred ccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCC
Q 018529 116 NHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGA 194 (354)
Q Consensus 116 ~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~ 194 (354)
..|+|++|+.++.+.++++|+.+++.+++.+++++.++|.++.+...+++|++|+|+|+ |.+|++++++|+..|+
T Consensus 59 ----~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~ 134 (293)
T cd05195 59 ----APGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGA 134 (293)
T ss_pred ----ecCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCC
Confidence 35799999999999999999999999999999999999999877789999999999975 9999999999999999
Q ss_pred cEEEEEcCChhhHHHHHhcC--CceEEcCCCCChhHHHHHHHHcCC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEc
Q 018529 195 SRIIGVDRSSKRFEEAKKFG--VTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVG 271 (354)
Q Consensus 195 ~~vi~v~~~~~~~~~~~~lg--~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g 271 (354)
+|+++++++++.++++++| ++.+++..+.+ +.+.+.+.+.+ ++|++++++|+. .+..++++++++ |+++.+|
T Consensus 135 -~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~-g~~v~~g 209 (293)
T cd05195 135 -EVFATVGSEEKREFLRELGGPVDHIFSSRDLS--FADGILRATGGRGVDVVLNSLSGE-LLRASWRCLAPF-GRFVEIG 209 (293)
T ss_pred -EEEEEeCCHHHHHHHHHhCCCcceEeecCchh--HHHHHHHHhCCCCceEEEeCCCch-HHHHHHHhcccC-ceEEEee
Confidence 8999989999999998888 67777665443 77788888766 899999999984 889999999997 9999998
Q ss_pred CCCCCceeecchhhhccccEEEEEeccCCC--C----CCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc
Q 018529 272 VPSKDAVFMTKPINVLNERTLKGTFFGNYK--P----RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG 345 (354)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~ 345 (354)
..............+.+++++......... . .+.+.++++++.++++. +..++.++++++.++++.+.+++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~ 287 (293)
T cd05195 210 KRDILSNSKLGMRPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLK--PLPPTVVPSASEIDAFRLMQSGKH 287 (293)
T ss_pred ccccccCCccchhhhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcc--cCCCeeechhhHHHHHHHHhcCCC
Confidence 654221112222223355566554432211 0 12466788888888665 345678999999999999987765
Q ss_pred -eeEE
Q 018529 346 -LRCI 349 (354)
Q Consensus 346 -~k~v 349 (354)
+|++
T Consensus 288 ~~~iv 292 (293)
T cd05195 288 IGKVV 292 (293)
T ss_pred Cceec
Confidence 4655
No 123
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=100.00 E-value=5e-31 Score=233.87 Aligned_cols=276 Identities=21% Similarity=0.323 Sum_probs=223.4
Q ss_pred EEEeeeecCccchhhhccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEecccCCCCCCcccccCCCCCCccccc
Q 018529 40 IKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFL 119 (354)
Q Consensus 40 V~v~~~~i~~~D~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~ 119 (354)
||+.++++|++|+....+..+ .|.++|||++|+|+++|++++.|++||+|++.
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~---~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~------------------------ 54 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLP---GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGL------------------------ 54 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCC---CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEE------------------------
Confidence 899999999999998876433 26789999999999999999999999999865
Q ss_pred ccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEE
Q 018529 120 GTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRII 198 (354)
Q Consensus 120 ~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi 198 (354)
..|+|++|+.++.+.++++|+++++.+++.+++++.++|+++.+...+++|++|+|+|+ |.+|.+++++|+..|+ +|+
T Consensus 55 ~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~-~v~ 133 (288)
T smart00829 55 APGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGA-EVF 133 (288)
T ss_pred cCCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEE
Confidence 34799999999999999999999999999999999999998777888999999999985 9999999999999999 899
Q ss_pred EEcCChhhHHHHHhcCC--ceEEcCCCCChhHHHHHHHHcCC-CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCC
Q 018529 199 GVDRSSKRFEEAKKFGV--TDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK 275 (354)
Q Consensus 199 ~v~~~~~~~~~~~~lg~--~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~ 275 (354)
++++++++.+.++++|+ +.++++.+.+ +.+.+.+..++ ++|+++|++|+ .....++++++++ |+++.+|....
T Consensus 134 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~ 209 (288)
T smart00829 134 ATAGSPEKRDFLRELGIPDDHIFSSRDLS--FADEILRATGGRGVDVVLNSLAG-EFLDASLRCLAPG-GRFVEIGKRDI 209 (288)
T ss_pred EEeCCHHHHHHHHHcCCChhheeeCCCcc--HHHHHHHHhCCCCcEEEEeCCCH-HHHHHHHHhccCC-cEEEEEcCcCC
Confidence 99999999999999998 6777766544 77778777766 89999999986 7788899999997 99999986532
Q ss_pred CceeecchhhhccccEEEEEeccCCC-----CCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEE
Q 018529 276 DAVFMTKPINVLNERTLKGTFFGNYK-----PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCI 349 (354)
Q Consensus 276 ~~~~~~~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~v 349 (354)
..........+.+++++.+....... ..+.+..+++++.++++.+. ..+.|+++++.++++.+.+++. +|++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~iv 287 (288)
T smart00829 210 RDNSQLGMAPFRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPL--PVTVFPISDVEDAFRYMQQGKHIGKVV 287 (288)
T ss_pred ccccccchhhhcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCc--CceEEcHHHHHHHHHHHhcCCCcceEe
Confidence 11112222223456666665432211 01235677888888876653 4578999999999999988765 4655
No 124
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.97 E-value=5.9e-29 Score=219.93 Aligned_cols=247 Identities=27% Similarity=0.416 Sum_probs=196.3
Q ss_pred CCCcccccceeEEEEEeCCCCCCCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCC
Q 018529 63 LFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA 142 (354)
Q Consensus 63 ~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~ 142 (354)
++|.++|||++|+|+++|+++++|++||+|++. +.|++|++++.+.++++|+++
T Consensus 19 ~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~--------------------------~~~~~~~~v~~~~~~~ip~~l 72 (277)
T cd08255 19 PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF--------------------------GPHAERVVVPANLLVPLPDGL 72 (277)
T ss_pred cCCcccCcceeEEEEEeCCCCCCCCCCCEEEec--------------------------CCcceEEEcCHHHeeECcCCC
Confidence 478999999999999999999999999999865 369999999999999999999
Q ss_pred CccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcC-CceEEcC
Q 018529 143 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG-VTDFVNT 221 (354)
Q Consensus 143 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg-~~~v~~~ 221 (354)
++.+++.+ +++.+||+++ ...++++++++||+|+|.+|++++++|+.+|.++|+++++++++.++++++| .+.++..
T Consensus 73 ~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~ 150 (277)
T cd08255 73 PPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPADPVAAD 150 (277)
T ss_pred CHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHHHcCCCcccccc
Confidence 99999988 7899999986 5789999999999988999999999999999944999999999999999999 4544433
Q ss_pred CCCChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCC-
Q 018529 222 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY- 300 (354)
Q Consensus 222 ~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~- 300 (354)
.+. ....+++|++||+++....+..++++++++ |+++.+|..... ..........+.+++.+......
T Consensus 151 ~~~---------~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 219 (277)
T cd08255 151 TAD---------EIGGRGADVVIEASGSPSALETALRLLRDR-GRVVLVGWYGLK-PLLLGEEFHFKRLPIRSSQVYGIG 219 (277)
T ss_pred chh---------hhcCCCCCEEEEccCChHHHHHHHHHhcCC-cEEEEEeccCCC-ccccHHHHHhccCeEEeecccccc
Confidence 211 112238999999998778889999999997 999999876533 11111111225556666554321
Q ss_pred --------CCCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCC--ceeEEE
Q 018529 301 --------KPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE--GLRCII 350 (354)
Q Consensus 301 --------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~--~~k~vi 350 (354)
...+.++++++++.++++.. .+.+.|+++++++|++.+.+++ ..|+++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~~k~~~ 277 (277)
T cd08255 220 RYDRPRRWTEARNLEEALDLLAEGRLEA--LITHRVPFEDAPEAYRLLFEDPPECLKVVL 277 (277)
T ss_pred cccccccccccccHHHHHHHHHcCCccc--cccCccCHHHHHHHHHHHHcCCccceeeeC
Confidence 11246889999999997554 3678899999999999998873 357654
No 125
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.97 E-value=3.3e-28 Score=203.39 Aligned_cols=295 Identities=18% Similarity=0.198 Sum_probs=224.5
Q ss_pred EEEeecCC-CCCCeEEEEEeeeecCccchhhhccCCCC-CCCCccccc----ceeEEEEEeCCCCCCCCCCCEEEecccC
Q 018529 25 IQDVEVAP-PQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGH----EAAGVVESVGEGVSDLEVGDHVLPVFTG 98 (354)
Q Consensus 25 ~~~~~~p~-~~~~evlV~v~~~~i~~~D~~~~~~~~~~-~~~p~~~G~----e~~G~V~~vG~~~~~~~~Gd~V~~~~~~ 98 (354)
..+++++. +++++||||.+|.+..|...-.+..-.+. .-.|+.+|- .++|+|++ |+.+++++||.|.+.
T Consensus 26 ~~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~kVi~--S~~~~~~~GD~v~g~--- 100 (343)
T KOG1196|consen 26 TTTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAKVID--SGHPNYKKGDLVWGI--- 100 (343)
T ss_pred eeeecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEEEEe--cCCCCCCcCceEEEe---
Confidence 34455444 68999999999999866544333211111 112333332 67899998 467889999999866
Q ss_pred CCCCCcccccCCCCCCcccccccccceeeEEeeccc--eEECC--CCCCccchhh-cccchhhhhhhhhhhcCCCCCCeE
Q 018529 99 ECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGC--VAKIN--PLAPLDKVCI-LSCGVSTGLGATLNVAKPERGSSV 173 (354)
Q Consensus 99 ~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~--~~~~P--~~~~~~~aa~-l~~~~~~a~~~l~~~~~~~~~~~v 173 (354)
=+|.||.+++++. .+++| .++++..... +..+.+|||..+++...+++|++|
T Consensus 101 -----------------------~gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv 157 (343)
T KOG1196|consen 101 -----------------------VGWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETV 157 (343)
T ss_pred -----------------------ccceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEE
Confidence 2899999998753 34443 3444444333 677999999999999999999999
Q ss_pred EEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccChH
Q 018529 174 AVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID 251 (354)
Q Consensus 174 lI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~ 251 (354)
+|.|| |++|+++.|+|+.+|+ +|+++..++||..+++. +|.+..+||+++. +..+++++..+.|+|+.||.+|+ .
T Consensus 158 ~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~-~~~~aL~r~~P~GIDiYfeNVGG-~ 234 (343)
T KOG1196|consen 158 FVSAASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKEES-DLSAALKRCFPEGIDIYFENVGG-K 234 (343)
T ss_pred EEeeccchhHHHHHHHHHhcCC-EEEEecCChhhhhhhHhccCCccceeccCcc-CHHHHHHHhCCCcceEEEeccCc-H
Confidence 99987 9999999999999999 99999999999998855 7999999999873 38888999888899999999999 8
Q ss_pred hHHHHHHHhhCCCceEEEEcCCCC---Cceeecchh--hhccccEEEEEeccCCCCC--CCHHHHHHHHHccCCCCCCce
Q 018529 252 NMISAFECVHDGWGVAVLVGVPSK---DAVFMTKPI--NVLNERTLKGTFFGNYKPR--TDLPSVVDMYMNKQLELEKFI 324 (354)
Q Consensus 252 ~~~~~~~~l~~~~g~~v~~g~~~~---~~~~~~~~~--~~~~~~~i~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v 324 (354)
.+...+..|+.. ||++.+|..+. +.+..+... .+.|++.+.|+...++.+. +.+..+..++++|+|+..+-+
T Consensus 235 ~lDavl~nM~~~-gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~edi 313 (343)
T KOG1196|consen 235 MLDAVLLNMNLH-GRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVEDI 313 (343)
T ss_pred HHHHHHHhhhhc-cceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEehhH
Confidence 999999999996 99999997652 112222222 2348999999776555432 346778889999999876544
Q ss_pred eeeeccccHHHHHHHHhcCCc-eeEEEecC
Q 018529 325 THRIPFSEINKAFEYMVKGEG-LRCIISME 353 (354)
Q Consensus 325 ~~~~~l~~~~~a~~~~~~~~~-~k~vi~~~ 353 (354)
. -+|+..++||.-+-+|.. +|.|+.+.
T Consensus 314 ~--~Glen~P~A~vglf~GkNvGKqiv~va 341 (343)
T KOG1196|consen 314 A--DGLENGPSALVGLFHGKNVGKQLVKVA 341 (343)
T ss_pred H--HHHhccHHHHHHHhccCcccceEEEee
Confidence 3 358999999999998886 69888765
No 126
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.96 E-value=3.4e-29 Score=239.05 Aligned_cols=293 Identities=16% Similarity=0.194 Sum_probs=242.1
Q ss_pred eEEEEeecC---CCCCCeEEEEEeeeecCccchhhhccCCCCCCC-------CcccccceeEEEEEeCCCCCCCCCCCEE
Q 018529 23 LIIQDVEVA---PPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF-------PRIFGHEAAGVVESVGEGVSDLEVGDHV 92 (354)
Q Consensus 23 l~~~~~~~p---~~~~~evlV~v~~~~i~~~D~~~~~~~~~~~~~-------p~~~G~e~~G~V~~vG~~~~~~~~Gd~V 92 (354)
+++.+.+.. +..++.=+--|-|+.+|..|+.+..|+.+..-. .+++|-|++|+ .+.|.||
T Consensus 1429 lrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrRv 1498 (2376)
T KOG1202|consen 1429 LRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRRV 1498 (2376)
T ss_pred eeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcEE
Confidence 666666654 235676789999999999999999987754333 47899999998 4569999
Q ss_pred EecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCCCCCCe
Q 018529 93 LPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSS 172 (354)
Q Consensus 93 ~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~ 172 (354)
++.. ..-++|+-+.+..+++|.+|++.++++|++.||.|+|+|+||..++..++|++
T Consensus 1499 M~mv-----------------------pAksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGek 1555 (2376)
T KOG1202|consen 1499 MGMV-----------------------PAKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEK 1555 (2376)
T ss_pred EEee-----------------------ehhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcE
Confidence 8763 33478999999999999999999999999999999999999999999999999
Q ss_pred EEEE-cCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHcCC-CccEEEEc
Q 018529 173 VAVF-GLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVEC 246 (354)
Q Consensus 173 vlI~-G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d~ 246 (354)
+||+ |+|++|++||.+|.+.|. .|+.+..++||++++.+ |...++-|.++.+ |..-+...|.| |+|+|+++
T Consensus 1556 iLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdts--FEq~vl~~T~GrGVdlVLNS 1632 (2376)
T KOG1202|consen 1556 ILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFANSRDTS--FEQHVLWHTKGRGVDLVLNS 1632 (2376)
T ss_pred EEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhccccccccc--HHHHHHHHhcCCCeeeehhh
Confidence 9999 569999999999999999 89999999999999865 3445556666665 88889999999 99999999
Q ss_pred ccChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCC--CCCHHHHHHHHHccCC--CCCC
Q 018529 247 TGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP--RTDLPSVVDMYMNKQL--ELEK 322 (354)
Q Consensus 247 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~ 322 (354)
... +-+..+++||+.+ |||..+|.-.-....++....+.+|.+++|..+..... .+++.++..++++|.- .+.|
T Consensus 1633 Lae-EkLQASiRCLa~~-GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~P 1710 (2376)
T KOG1202|consen 1633 LAE-EKLQASIRCLALH-GRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRP 1710 (2376)
T ss_pred hhH-HHHHHHHHHHHhc-CeeeeecceecccCCcchhhhhhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCceec
Confidence 977 7899999999998 99999986543444456666677999999976533322 2467888888888733 3567
Q ss_pred ceeeeeccccHHHHHHHHhcCCc-eeEEEecC
Q 018529 323 FITHRIPFSEINKAFEYMVKGEG-LRCIISME 353 (354)
Q Consensus 323 ~v~~~~~l~~~~~a~~~~~~~~~-~k~vi~~~ 353 (354)
+.+++|+-.++++||+.+.+|++ +|+||.+.
T Consensus 1711 L~ttvF~~~qvE~AFRfMasGKHIGKVvikvr 1742 (2376)
T KOG1202|consen 1711 LPTTVFHGQQVEDAFRFMASGKHIGKVVIKVR 1742 (2376)
T ss_pred cccccccHHHHHHHHHHHhccCccceEEEEEc
Confidence 78899999999999999999998 59998764
No 127
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.88 E-value=4.8e-23 Score=155.20 Aligned_cols=104 Identities=35% Similarity=0.573 Sum_probs=87.6
Q ss_pred CCeEEEEEeeeecCccchhhhccC-CCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEecccCCCCCCcccccCCCC-
Q 018529 35 AMEVRIKIKYTSLCRTDLYFWESK-GQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSING- 112 (354)
Q Consensus 35 ~~evlV~v~~~~i~~~D~~~~~~~-~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~- 112 (354)
|+||||||.++|||++|++++.+. .....+|.++|||++|+|+++|+++++|++||+|++.+...|+.|++|..+...
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~ 80 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL 80 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence 689999999999999999999984 455778999999999999999999999999999999999999999999755432
Q ss_pred ---CCcccccccccceeeEEeeccceEEC
Q 018529 113 ---EPVNHFLGTSTFSEYTVVHSGCVAKI 138 (354)
Q Consensus 113 ---~~~~~~~~~g~~a~~~~v~~~~~~~~ 138 (354)
....+....|+||||+.+|+++++|+
T Consensus 81 c~~~~~~g~~~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 81 CPNPEVLGLGLDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp TTTBEETTTSSTCSSBSEEEEEGGGEEEE
T ss_pred CCCCCEeEcCCCCcccCeEEEehHHEEEC
Confidence 23344445699999999999999985
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.76 E-value=9.8e-18 Score=130.70 Aligned_cols=127 Identities=32% Similarity=0.558 Sum_probs=111.7
Q ss_pred hhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCC-CccEEEEcccChHhHHHHHH
Q 018529 180 AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFE 258 (354)
Q Consensus 180 ~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d~~g~~~~~~~~~~ 258 (354)
++|++++|+|+.+|+ +|++++++++|+++++++|++.++++++.+ +.+++++++++ ++|+||||+|+++.++.+++
T Consensus 1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~--~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~ 77 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSDDD--FVEQIRELTGGRGVDVVIDCVGSGDTLQEAIK 77 (130)
T ss_dssp HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTTSS--HHHHHHHHTTTSSEEEEEESSSSHHHHHHHHH
T ss_pred ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccccc--cccccccccccccceEEEEecCcHHHHHHHHH
Confidence 589999999999996 999999999999999999999999998887 99999999998 99999999998899999999
Q ss_pred HhhCCCceEEEEcCCCCCceeecchhh-hccccEEEEEeccCCCCCCCHHHHHHHHH
Q 018529 259 CVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYM 314 (354)
Q Consensus 259 ~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~ 314 (354)
+++++ |+++.+|... .....++... +.+++++.|++.+. .++++++++++.
T Consensus 78 ~l~~~-G~~v~vg~~~-~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~la 129 (130)
T PF00107_consen 78 LLRPG-GRIVVVGVYG-GDPISFNLMNLMFKEITIRGSWGGS---PEDFQEALQLLA 129 (130)
T ss_dssp HEEEE-EEEEEESSTS-TSEEEEEHHHHHHTTEEEEEESSGG---HHHHHHHHHHHH
T ss_pred HhccC-CEEEEEEccC-CCCCCCCHHHHHhCCcEEEEEccCC---HHHHHHHHHHhc
Confidence 99997 9999999987 3444554444 45999999998765 357888888875
No 129
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.53 E-value=3e-13 Score=123.31 Aligned_cols=176 Identities=20% Similarity=0.205 Sum_probs=134.5
Q ss_pred hhhhhhhhcC-CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHH
Q 018529 157 GLGATLNVAK-PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEM 235 (354)
Q Consensus 157 a~~~l~~~~~-~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~ 235 (354)
.|.++.+..+ .-+|++|+|+|+|++|+.+++.++.+|+ +|++++.++.|.+.++++|+..+ + ..+.+
T Consensus 188 ~~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~-------~~e~v--- 255 (413)
T cd00401 188 LIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-T-------MEEAV--- 255 (413)
T ss_pred hHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-c-------HHHHH---
Confidence 3455555444 4789999999999999999999999999 89999999999999999998533 1 21222
Q ss_pred cCCCccEEEEcccChHhHHHH-HHHhhCCCceEEEEcCCCCCceeecchhhh-ccccEEEEEeccCCCCCCCHH--HHHH
Q 018529 236 TNGGVDRSVECTGNIDNMISA-FECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYKPRTDLP--SVVD 311 (354)
Q Consensus 236 ~~~~~dvv~d~~g~~~~~~~~-~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~--~~~~ 311 (354)
.++|+||+++|.+..+... +..++++ |+++.+|.. +. .++...+ .+++++.+++.... ..+++ +.+.
T Consensus 256 --~~aDVVI~atG~~~~i~~~~l~~mk~G-gilvnvG~~--~~--eId~~~L~~~el~i~g~~~~~~--~~~~~~g~aI~ 326 (413)
T cd00401 256 --KEGDIFVTTTGNKDIITGEHFEQMKDG-AIVCNIGHF--DV--EIDVKGLKENAVEVVNIKPQVD--RYELPDGRRII 326 (413)
T ss_pred --cCCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEeCCC--CC--ccCHHHHHhhccEEEEccCCcc--eEEcCCcchhh
Confidence 2589999999998888876 9999997 999999854 22 2333333 37888888764321 22455 7899
Q ss_pred HHHccCC-CCCCceeee-----eccc-cHHHHHHHHhcCCc--eeEEEecC
Q 018529 312 MYMNKQL-ELEKFITHR-----IPFS-EINKAFEYMVKGEG--LRCIISME 353 (354)
Q Consensus 312 ~~~~~~~-~~~~~v~~~-----~~l~-~~~~a~~~~~~~~~--~k~vi~~~ 353 (354)
++.+|++ ++...++|. ++|+ |+.++++.+.++.. .|+++.++
T Consensus 327 LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~ 377 (413)
T cd00401 327 LLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPK 377 (413)
T ss_pred hhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCH
Confidence 9999988 888888898 9999 99999999987664 47776653
No 130
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.43 E-value=2.9e-12 Score=119.86 Aligned_cols=155 Identities=18% Similarity=0.161 Sum_probs=112.8
Q ss_pred CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceE-EcCCCCC-----------hhHHHHHH
Q 018529 166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHD-----------RPIQEVIA 233 (354)
Q Consensus 166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v-~~~~~~~-----------~~~~~~i~ 233 (354)
+..++++|+|+|+|++|+++++.|+.+|+ .|++++.++++++.++++|++.+ ++..+.+ .++.+..+
T Consensus 161 G~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~ 239 (509)
T PRK09424 161 GKVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM 239 (509)
T ss_pred CCcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence 35789999999999999999999999999 89999999999999999999854 5543321 12333333
Q ss_pred HH-cC--CCccEEEEcccCh-----Hh-HHHHHHHhhCCCceEEEEcCCCCCc-eeecchhh-hc-cccEEEEEeccCCC
Q 018529 234 EM-TN--GGVDRSVECTGNI-----DN-MISAFECVHDGWGVAVLVGVPSKDA-VFMTKPIN-VL-NERTLKGTFFGNYK 301 (354)
Q Consensus 234 ~~-~~--~~~dvv~d~~g~~-----~~-~~~~~~~l~~~~g~~v~~g~~~~~~-~~~~~~~~-~~-~~~~i~g~~~~~~~ 301 (354)
+. .+ +++|+||+|+|.+ .. .+.+++.++++ |+++.++...++. ........ +. +++++.|.+. .
T Consensus 240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpG-gvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n--~- 315 (509)
T PRK09424 240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPG-SVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTD--L- 315 (509)
T ss_pred HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCC-CEEEEEccCCCCCcccccCccceEeECCEEEEEeCC--C-
Confidence 32 33 3799999999963 35 49999999997 9999999853221 22222222 33 7899998763 2
Q ss_pred CCCCHHHHHHHHHccCCCCCCcee
Q 018529 302 PRTDLPSVVDMYMNKQLELEKFIT 325 (354)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~v~ 325 (354)
..+...++.+++.++.+.+.++++
T Consensus 316 P~~~p~~As~lla~~~i~l~~lIt 339 (509)
T PRK09424 316 PSRLPTQSSQLYGTNLVNLLKLLC 339 (509)
T ss_pred chhHHHHHHHHHHhCCccHHHHhc
Confidence 223334689999999877665554
No 131
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.26 E-value=1e-12 Score=101.83 Aligned_cols=119 Identities=18% Similarity=0.331 Sum_probs=76.7
Q ss_pred cCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc--ChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhh-ccc
Q 018529 213 FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG--NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNE 289 (354)
Q Consensus 213 lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g--~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~ 289 (354)
||++++++|++.+ + ...+++|+|||++| +...+..++++| ++ |+++.++. ....... .+.
T Consensus 1 LGAd~vidy~~~~--~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~-G~~v~i~~-------~~~~~~~~~~~ 63 (127)
T PF13602_consen 1 LGADEVIDYRDTD--F------AGPGGVDVVIDTVGQTGESLLDASRKLL-PG-GRVVSIGG-------DLPSFARRLKG 63 (127)
T ss_dssp CT-SEEEETTCSH--H------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EE-EEEEEE-S-------HHHHHHHHHHC
T ss_pred CCcCEEecCCCcc--c------cCCCCceEEEECCCCccHHHHHHHHHHC-CC-CEEEEECC-------cccchhhhhcc
Confidence 6999999998543 4 22348999999999 655567888888 97 99998874 1111111 122
Q ss_pred cEEEEEeccC--CC--CCCCHHHHHHHHHccCCCCCCceeeeeccccHHHHHHHHhcCCc-eeEEE
Q 018529 290 RTLKGTFFGN--YK--PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCII 350 (354)
Q Consensus 290 ~~i~g~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~a~~~~~~~~~-~k~vi 350 (354)
..+...++.. .. ..+.++++++++.+|++++. +.++|||+++++|++.+++++. ||+||
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~--i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 64 RSIRYSFLFSVDPNAIRAEALEELAELVAEGKLKPP--IDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp HHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS-----EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred cceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEEe--eccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 2333333321 10 12358999999999976665 8889999999999999999886 68886
No 132
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.79 E-value=1.1e-07 Score=83.60 Aligned_cols=167 Identities=17% Similarity=0.246 Sum_probs=104.4
Q ss_pred hcCCCCCCeEEEEcCChhHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHcCC
Q 018529 164 VAKPERGSSVAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNG 238 (354)
Q Consensus 164 ~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~-~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~~ 238 (354)
.+.++++++||.+|+|. |..++++++..|.. +|++++.+++..+.+++ ++...+... ..+ +.+ + .+..+
T Consensus 72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~-~~d--~~~-l-~~~~~ 145 (272)
T PRK11873 72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFR-LGE--IEA-L-PVADN 145 (272)
T ss_pred hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEE-Ecc--hhh-C-CCCCC
Confidence 46789999999999988 98888888887753 79999999999988876 344332111 111 111 1 12234
Q ss_pred CccEEEEcc------cChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhccccEEEEEeccCCCCCCCHHHHHHH
Q 018529 239 GVDRSVECT------GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDM 312 (354)
Q Consensus 239 ~~dvv~d~~------g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 312 (354)
.||+|+... .....+..+.+.|+++ |++++.+..... . +. ..+.+...+.+...... ....++.++
T Consensus 146 ~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpG-G~l~i~~~~~~~-~--~~-~~~~~~~~~~~~~~~~~---~~~~e~~~~ 217 (272)
T PRK11873 146 SVDVIISNCVINLSPDKERVFKEAFRVLKPG-GRFAISDVVLRG-E--LP-EEIRNDAELYAGCVAGA---LQEEEYLAM 217 (272)
T ss_pred ceeEEEEcCcccCCCCHHHHHHHHHHHcCCC-cEEEEEEeeccC-C--CC-HHHHHhHHHHhccccCC---CCHHHHHHH
Confidence 799998543 2346789999999997 999987755422 1 11 11222222222211111 245666676
Q ss_pred HHc-cCCCCCCceeeeeccccHHHHHHHH--hcCC
Q 018529 313 YMN-KQLELEKFITHRIPFSEINKAFEYM--VKGE 344 (354)
Q Consensus 313 ~~~-~~~~~~~~v~~~~~l~~~~~a~~~~--~~~~ 344 (354)
+.+ |-..+.....+.++++++.++++.+ .+++
T Consensus 218 l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~~~~ 252 (272)
T PRK11873 218 LAEAGFVDITIQPKREYRIPDAREFLEDWGIAPGR 252 (272)
T ss_pred HHHCCCCceEEEeccceecccHHHHHHHhcccccc
Confidence 666 3333333345678899999999988 5444
No 133
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.71 E-value=5.1e-07 Score=84.67 Aligned_cols=107 Identities=21% Similarity=0.223 Sum_probs=81.8
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEE-cCCCC-----------ChhHHHHHHHH
Q 018529 168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV-NTSEH-----------DRPIQEVIAEM 235 (354)
Q Consensus 168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~-~~~~~-----------~~~~~~~i~~~ 235 (354)
.++++|+|+|+|.+|++++++|+.+|+ .|++++.+.++++.++++|.+.+. +..++ +.++.+...+.
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 467999999999999999999999999 799999999999999999987643 32110 11233333332
Q ss_pred cC---CCccEEEEcc---cChH---hHHHHHHHhhCCCceEEEEcCCCCC
Q 018529 236 TN---GGVDRSVECT---GNID---NMISAFECVHDGWGVAVLVGVPSKD 276 (354)
Q Consensus 236 ~~---~~~dvv~d~~---g~~~---~~~~~~~~l~~~~g~~v~~g~~~~~ 276 (354)
.. .++|+||+|+ |.+. ..+..++.++++ +.++.++...++
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpG-svIVDlA~d~GG 289 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAG-SVIVDLAAEQGG 289 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCC-CEEEEeeeCCCC
Confidence 22 3799999999 6533 567889999997 999999876544
No 134
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.52 E-value=4.3e-09 Score=97.78 Aligned_cols=160 Identities=18% Similarity=0.193 Sum_probs=104.8
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEecccCCCCCCcccccCCCCCCcccccccccceeeEEeeccceEE---C-CCCC
Q 018529 67 IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHFLGTSTFSEYTVVHSGCVAK---I-NPLA 142 (354)
Q Consensus 67 ~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~---~-P~~~ 142 (354)
.-|.|+++.+.+|+++.++ +|++.+.+ |++|.+|..........+..-.+.|++++.++. .+.. + +..+
T Consensus 89 ~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a~~~a~~~~~~g~~l~~lf~~a~~~~k-~vr~~t~i~~~~v 161 (417)
T TIGR01035 89 LTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNAYKVAQEEKTVGKVLERLFQKAFSVGK-RVRTETDISAGAV 161 (417)
T ss_pred cCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhh-hhhhhcCCCCCCc
Confidence 3588999999999998775 77888888 899998843221211222233478999988876 3332 2 2222
Q ss_pred CccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHH-HHHhcCCceEEcC
Q 018529 143 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE-EAKKFGVTDFVNT 221 (354)
Q Consensus 143 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~-~~~~lg~~~v~~~ 221 (354)
|...+| .....+..+..++++|+|+|+|.+|.++++.++..|+.+|++++++.++.+ +++++|.. .+..
T Consensus 162 Sv~~~A---------v~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~-~i~~ 231 (417)
T TIGR01035 162 SISSAA---------VELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE-AVKF 231 (417)
T ss_pred CHHHHH---------HHHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe-EeeH
Confidence 222111 111123334467899999999999999999999999668999999988754 66777763 2222
Q ss_pred CCCChhHHHHHHHHcCCCccEEEEcccChHh
Q 018529 222 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDN 252 (354)
Q Consensus 222 ~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~ 252 (354)
. ++.+.+ .++|+||+|++.+..
T Consensus 232 ~----~l~~~l-----~~aDvVi~aT~s~~~ 253 (417)
T TIGR01035 232 E----DLEEYL-----AEADIVISSTGAPHP 253 (417)
T ss_pred H----HHHHHH-----hhCCEEEECCCCCCc
Confidence 1 122222 258999999987653
No 135
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.50 E-value=2.6e-06 Score=78.47 Aligned_cols=104 Identities=26% Similarity=0.272 Sum_probs=80.2
Q ss_pred hhhhhhhhhcCCC-CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHH
Q 018529 156 TGLGATLNVAKPE-RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAE 234 (354)
Q Consensus 156 ~a~~~l~~~~~~~-~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~ 234 (354)
..|.++.+..++. +|++|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|+. +.+ +.+.+
T Consensus 197 s~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~~-------l~eal-- 265 (425)
T PRK05476 197 SLLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VMT-------MEEAA-- 265 (425)
T ss_pred hhHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ecC-------HHHHH--
Confidence 3455554443544 89999999999999999999999999 899999998887777667764 221 22222
Q ss_pred HcCCCccEEEEcccChHhHH-HHHHHhhCCCceEEEEcCCC
Q 018529 235 MTNGGVDRSVECTGNIDNMI-SAFECVHDGWGVAVLVGVPS 274 (354)
Q Consensus 235 ~~~~~~dvv~d~~g~~~~~~-~~~~~l~~~~g~~v~~g~~~ 274 (354)
.++|+||+++|....+. ..+..++++ +.++..|...
T Consensus 266 ---~~aDVVI~aTG~~~vI~~~~~~~mK~G-ailiNvG~~d 302 (425)
T PRK05476 266 ---ELGDIFVTATGNKDVITAEHMEAMKDG-AILANIGHFD 302 (425)
T ss_pred ---hCCCEEEECCCCHHHHHHHHHhcCCCC-CEEEEcCCCC
Confidence 25899999999877776 678889997 8998888754
No 136
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.35 E-value=7.3e-06 Score=75.10 Aligned_cols=103 Identities=28% Similarity=0.314 Sum_probs=79.4
Q ss_pred hhhhhhhhcC-CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHH
Q 018529 157 GLGATLNVAK-PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEM 235 (354)
Q Consensus 157 a~~~l~~~~~-~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~ 235 (354)
.+.++.+..+ ..+|++|+|+|.|.+|...++.++.+|+ +|++++.++.+...+...|+. +.+ ..+.+
T Consensus 181 ~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-------leeal--- 248 (406)
T TIGR00936 181 TIDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VMT-------MEEAA--- 248 (406)
T ss_pred HHHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eCC-------HHHHH---
Confidence 4444444434 4789999999999999999999999999 899999888887777777763 221 22222
Q ss_pred cCCCccEEEEcccChHhHHH-HHHHhhCCCceEEEEcCCC
Q 018529 236 TNGGVDRSVECTGNIDNMIS-AFECVHDGWGVAVLVGVPS 274 (354)
Q Consensus 236 ~~~~~dvv~d~~g~~~~~~~-~~~~l~~~~g~~v~~g~~~ 274 (354)
.+.|+||+++|....++. .+..++++ +.++.+|...
T Consensus 249 --~~aDVVItaTG~~~vI~~~~~~~mK~G-ailiN~G~~~ 285 (406)
T TIGR00936 249 --KIGDIFITATGNKDVIRGEHFENMKDG-AIVANIGHFD 285 (406)
T ss_pred --hcCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEECCCC
Confidence 247999999999887774 88889996 9999998754
No 137
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=98.34 E-value=1.6e-08 Score=94.38 Aligned_cols=158 Identities=21% Similarity=0.172 Sum_probs=96.4
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEecccCCCCCCcccccCCCCCCcccc---cccccceeeEEeeccceEECCCCCC
Q 018529 67 IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRFSINGEPVNHF---LGTSTFSEYTVVHSGCVAKINPLAP 143 (354)
Q Consensus 67 ~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~---~~~g~~a~~~~v~~~~~~~~P~~~~ 143 (354)
.-|+|+++.+.+|+++.++ .|++.+.+ |++|... +..+...+. .-.+.|++.+.++ ..+.
T Consensus 91 ~~g~ea~~hl~~V~~GldS-----~V~GE~qI-lgQvk~a---~~~a~~~g~~g~~l~~lf~~a~~~~--------k~v~ 153 (423)
T PRK00045 91 HEGEEAVRHLFRVASGLDS-----MVLGEPQI-LGQVKDA---YALAQEAGTVGTILNRLFQKAFSVA--------KRVR 153 (423)
T ss_pred cCCHHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH---HHHHHHcCCchHHHHHHHHHHHHHH--------hhHh
Confidence 3599999999999999876 44444444 3333321 111111111 1224565544443 3333
Q ss_pred ccchhhcccchhhhhhhhhhhc---CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHH-HHHhcCCceEE
Q 018529 144 LDKVCILSCGVSTGLGATLNVA---KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE-EAKKFGVTDFV 219 (354)
Q Consensus 144 ~~~aa~l~~~~~~a~~~l~~~~---~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~-~~~~lg~~~v~ 219 (354)
.+.+ ....+.+.+++++.... ...++++|+|+|+|.+|.++++.++..|+.+|++++++.++.+ +++++|.. ++
T Consensus 154 ~~t~-i~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~ 231 (423)
T PRK00045 154 TETG-IGAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AI 231 (423)
T ss_pred hhcC-CCCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-Ee
Confidence 2222 22224555666643222 1257899999999999999999999999878999999988855 67778753 33
Q ss_pred cCCCCChhHHHHHHHHcCCCccEEEEcccChHh
Q 018529 220 NTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDN 252 (354)
Q Consensus 220 ~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~ 252 (354)
.+. ++.+.+ .++|+||+|+|.+..
T Consensus 232 ~~~----~~~~~l-----~~aDvVI~aT~s~~~ 255 (423)
T PRK00045 232 PLD----ELPEAL-----AEADIVISSTGAPHP 255 (423)
T ss_pred eHH----HHHHHh-----ccCCEEEECCCCCCc
Confidence 221 122222 258999999987543
No 138
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=98.34 E-value=1.4e-05 Score=69.36 Aligned_cols=131 Identities=20% Similarity=0.180 Sum_probs=84.4
Q ss_pred cceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcC
Q 018529 123 TFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR 202 (354)
Q Consensus 123 ~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~ 202 (354)
+|.+|.. +...++.+++++++..+..-. +.. .+..+. ..+.++++||-+|+|. |.+++.+++ .|..+|++++.
T Consensus 78 ~~~~~~~-~~~~~i~i~p~~afgtg~h~t-t~~-~l~~l~--~~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDi 150 (250)
T PRK00517 78 SWEDPPD-PDEINIELDPGMAFGTGTHPT-TRL-CLEALE--KLVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDI 150 (250)
T ss_pred CCcCCCC-CCeEEEEECCCCccCCCCCHH-HHH-HHHHHH--hhcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEEC
Confidence 5666644 667889999988877654221 111 111111 2357899999999987 888886555 67757999999
Q ss_pred ChhhHHHHHhc----CCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccCh---HhHHHHHHHhhCCCceEEEEcCC
Q 018529 203 SSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI---DNMISAFECVHDGWGVAVLVGVP 273 (354)
Q Consensus 203 ~~~~~~~~~~l----g~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~---~~~~~~~~~l~~~~g~~v~~g~~ 273 (354)
++...+.+++. +....+.....+ ..||+|+...... ..+..+.+.|+++ |++++.+..
T Consensus 151 s~~~l~~A~~n~~~~~~~~~~~~~~~~------------~~fD~Vvani~~~~~~~l~~~~~~~Lkpg-G~lilsgi~ 215 (250)
T PRK00517 151 DPQAVEAARENAELNGVELNVYLPQGD------------LKADVIVANILANPLLELAPDLARLLKPG-GRLILSGIL 215 (250)
T ss_pred CHHHHHHHHHHHHHcCCCceEEEccCC------------CCcCEEEEcCcHHHHHHHHHHHHHhcCCC-cEEEEEECc
Confidence 99988877652 321111111110 1589998765432 3466788889997 999987654
No 139
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.33 E-value=1.6e-05 Score=70.57 Aligned_cols=97 Identities=19% Similarity=0.282 Sum_probs=75.9
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529 169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 248 (354)
Q Consensus 169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g 248 (354)
.+.+++|+|.|.+|..+++.++.+|+ +|++++++.++.++++++|...+ .+ +.+.+.. .++|+||++++
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~--------~~l~~~l-~~aDiVI~t~p 219 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HL--------SELAEEV-GKIDIIFNTIP 219 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH--------HHHHHHh-CCCCEEEECCC
Confidence 68999999999999999999999999 99999999999888988887532 11 1122221 25899999997
Q ss_pred ChHhHHHHHHHhhCCCceEEEEcCCCCCc
Q 018529 249 NIDNMISAFECVHDGWGVAVLVGVPSKDA 277 (354)
Q Consensus 249 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~ 277 (354)
..-..+..++.++++ +.++.++...++.
T Consensus 220 ~~~i~~~~l~~~~~g-~vIIDla~~pggt 247 (296)
T PRK08306 220 ALVLTKEVLSKMPPE-ALIIDLASKPGGT 247 (296)
T ss_pred hhhhhHHHHHcCCCC-cEEEEEccCCCCc
Confidence 644556777889997 9999888766443
No 140
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.29 E-value=2.1e-06 Score=76.89 Aligned_cols=108 Identities=24% Similarity=0.264 Sum_probs=79.4
Q ss_pred cceEECCCCCCccchhhcccchhhhhhhhhhhcCC----CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhH-
Q 018529 133 GCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKP----ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRF- 207 (354)
Q Consensus 133 ~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~----~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~- 207 (354)
...+++|+.+..+.++... +.+.+++++ +.+.. -++.+|+|+|+|.+|.++++.++..|..+|++++++.++.
T Consensus 139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av-~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~ 216 (311)
T cd05213 139 QKAIKVGKRVRTETGISRG-AVSISSAAV-ELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAE 216 (311)
T ss_pred HHHHHHHHHHhhhcCCCCC-CcCHHHHHH-HHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHH
Confidence 3677889999888887765 666777764 33332 4789999999999999999999988877899999998865
Q ss_pred HHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccChHh
Q 018529 208 EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDN 252 (354)
Q Consensus 208 ~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~ 252 (354)
++++++|.. +++.. ++.+.+ ..+|+||.+++.+..
T Consensus 217 ~la~~~g~~-~~~~~----~~~~~l-----~~aDvVi~at~~~~~ 251 (311)
T cd05213 217 ELAKELGGN-AVPLD----ELLELL-----NEADVVISATGAPHY 251 (311)
T ss_pred HHHHHcCCe-EEeHH----HHHHHH-----hcCCEEEECCCCCch
Confidence 677888873 33221 122222 247999999998655
No 141
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=98.28 E-value=1.6e-05 Score=69.66 Aligned_cols=185 Identities=12% Similarity=0.096 Sum_probs=106.7
Q ss_pred EEEEEeCCCCCCCCCCCEEEecccCCCC-CCcccc---cCCC--CCCcccccccccceeeEEeeccceEECCCCCCccch
Q 018529 74 GVVESVGEGVSDLEVGDHVLPVFTGECG-DCRHCR---FSIN--GEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKV 147 (354)
Q Consensus 74 G~V~~vG~~~~~~~~Gd~V~~~~~~~~~-~c~~c~---~~~~--~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~~~~~~a 147 (354)
++|++ |.++++.+|.||.++....-. .=.+-+ .++. ..++.+ -.-.|-+|.++..+..+.- .....++
T Consensus 39 A~Vve--S~~~~i~vGerlyGy~P~ashl~l~p~~v~~~~f~d~s~hR~~--l~~~YN~Y~r~~~d~~y~~--~~e~~~~ 112 (314)
T PF11017_consen 39 ATVVE--SRHPGIAVGERLYGYFPMASHLVLEPGKVSPGGFRDVSPHRAG--LPPIYNQYLRVSADPAYDP--EREDWQM 112 (314)
T ss_pred EEEEe--eCCCCccCccEEEeeccccceeEEeccccCCCccccChhhhCc--CchhhhceeecCCCcccCc--chhHHHH
Confidence 45555 788899999999988643310 000000 0000 000000 0024566666665544311 1111222
Q ss_pred hhcccchhhhhhhhhhh---cCCCCCCeEEEEcC-ChhHHHHHHHHH-HcCCcEEEEEcCChhhHHHHHhcCC-ceEEcC
Q 018529 148 CILSCGVSTGLGATLNV---AKPERGSSVAVFGL-GAVGLAAAEGAR-IAGASRIIGVDRSSKRFEEAKKFGV-TDFVNT 221 (354)
Q Consensus 148 a~l~~~~~~a~~~l~~~---~~~~~~~~vlI~G~-g~~G~~a~~~a~-~~g~~~vi~v~~~~~~~~~~~~lg~-~~v~~~ 221 (354)
..-+ -+.|+|-. .+- ...-..+.|+|.+| +-+++..+..++ ..+.-++|+++ |+.+..+.+++|+ +.|+.|
T Consensus 113 LlrP-Lf~Tsfll-~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglT-S~~N~~Fve~lg~Yd~V~~Y 189 (314)
T PF11017_consen 113 LLRP-LFITSFLL-DDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLT-SARNVAFVESLGCYDEVLTY 189 (314)
T ss_pred HHHH-HHHHHHHH-HHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEe-cCcchhhhhccCCceEEeeh
Confidence 2222 44555532 221 12233466777776 778888777777 45555999995 5555668999997 778877
Q ss_pred CCCChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCC
Q 018529 222 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK 275 (354)
Q Consensus 222 ~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~ 275 (354)
++ |.++....--+++|..|+.+....+...++..--..+.+|.+..
T Consensus 190 d~--------i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th~ 235 (314)
T PF11017_consen 190 DD--------IDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATHW 235 (314)
T ss_pred hh--------hhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccCc
Confidence 54 44443345678899999988888888888886455777876653
No 142
>PLN02494 adenosylhomocysteinase
Probab=98.26 E-value=1.3e-05 Score=74.26 Aligned_cols=101 Identities=21% Similarity=0.286 Sum_probs=79.5
Q ss_pred hhhhhhhcCC-CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHc
Q 018529 158 LGATLNVAKP-ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT 236 (354)
Q Consensus 158 ~~~l~~~~~~-~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~ 236 (354)
+.++.+..++ -.|++|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|+..+ + ..+.++
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~vv------~--leEal~--- 308 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQVL------T--LEDVVS--- 308 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCeec------c--HHHHHh---
Confidence 4555554443 679999999999999999999999999 89999999888777777776522 1 323232
Q ss_pred CCCccEEEEcccChHhH-HHHHHHhhCCCceEEEEcCC
Q 018529 237 NGGVDRSVECTGNIDNM-ISAFECVHDGWGVAVLVGVP 273 (354)
Q Consensus 237 ~~~~dvv~d~~g~~~~~-~~~~~~l~~~~g~~v~~g~~ 273 (354)
..|++++++|....+ ...++.++++ +.++.+|..
T Consensus 309 --~ADVVI~tTGt~~vI~~e~L~~MK~G-AiLiNvGr~ 343 (477)
T PLN02494 309 --EADIFVTTTGNKDIIMVDHMRKMKNN-AIVCNIGHF 343 (477)
T ss_pred --hCCEEEECCCCccchHHHHHhcCCCC-CEEEEcCCC
Confidence 479999999986654 7899999997 999999874
No 143
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.21 E-value=1e-05 Score=66.47 Aligned_cols=99 Identities=20% Similarity=0.326 Sum_probs=76.5
Q ss_pred hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhh----HHHHHhcCCceE-EcCCCCChhHHHHHHHH
Q 018529 161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR----FEEAKKFGVTDF-VNTSEHDRPIQEVIAEM 235 (354)
Q Consensus 161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~----~~~~~~lg~~~v-~~~~~~~~~~~~~i~~~ 235 (354)
|.+...++++++||=+|+|. |+.++-+|+..| +|+.+++.++= .+.++++|...| +...+....|
T Consensus 64 m~~~L~~~~g~~VLEIGtGs-GY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG~~G~------- 133 (209)
T COG2518 64 MLQLLELKPGDRVLEIGTGS-GYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYENVTVRHGDGSKGW------- 133 (209)
T ss_pred HHHHhCCCCCCeEEEECCCc-hHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCcccCC-------
Confidence 46778999999999999874 999999999998 89999998874 444566888554 3333332222
Q ss_pred cCC-CccEEEEcccChHhHHHHHHHhhCCCceEEEE
Q 018529 236 TNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLV 270 (354)
Q Consensus 236 ~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~ 270 (354)
.+. .||.|+-+.+.+..-...++.|+++ |+++.-
T Consensus 134 ~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~g-Grlv~P 168 (209)
T COG2518 134 PEEAPYDRIIVTAAAPEVPEALLDQLKPG-GRLVIP 168 (209)
T ss_pred CCCCCcCEEEEeeccCCCCHHHHHhcccC-CEEEEE
Confidence 233 8999999888877778999999997 997754
No 144
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=98.01 E-value=6e-05 Score=69.07 Aligned_cols=99 Identities=22% Similarity=0.176 Sum_probs=69.5
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529 169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 247 (354)
Q Consensus 169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~ 247 (354)
++.+|+|+|+|.+|+.+++.++.+|+ +|++++++.++.+.+.+ ++......+.+ . +.+.+.. ..+|+||+++
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~-~----~~l~~~l-~~aDvVI~a~ 238 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSN-A----YEIEDAV-KRADLLIGAV 238 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCC-H----HHHHHHH-ccCCEEEEcc
Confidence 34569999999999999999999999 89999999988877654 55432222221 1 1222222 2589999997
Q ss_pred cC-----hH-hHHHHHHHhhCCCceEEEEcCCCC
Q 018529 248 GN-----ID-NMISAFECVHDGWGVAVLVGVPSK 275 (354)
Q Consensus 248 g~-----~~-~~~~~~~~l~~~~g~~v~~g~~~~ 275 (354)
+. +. ..+..++.++++ +.++.++...+
T Consensus 239 ~~~g~~~p~lit~~~l~~mk~g-~vIvDva~d~G 271 (370)
T TIGR00518 239 LIPGAKAPKLVSNSLVAQMKPG-AVIVDVAIDQG 271 (370)
T ss_pred ccCCCCCCcCcCHHHHhcCCCC-CEEEEEecCCC
Confidence 32 22 246777889997 99999886543
No 145
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.94 E-value=0.00012 Score=68.10 Aligned_cols=125 Identities=19% Similarity=0.203 Sum_probs=85.2
Q ss_pred eEECCCCCCccchhhcccchhhhhhhhhhhcC-CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhc
Q 018529 135 VAKINPLAPLDKVCILSCGVSTGLGATLNVAK-PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF 213 (354)
Q Consensus 135 ~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~-~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~l 213 (354)
++-+|+...-..+-...-...+.+.++.+..+ .-.|++|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...
T Consensus 218 V~nv~d~~tk~~aD~~~G~~~s~~d~~~R~~~~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~ 296 (476)
T PTZ00075 218 AINVNDSVTKSKFDNIYGCRHSLIDGIFRATDVMIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAME 296 (476)
T ss_pred EEEeCCcchHHHHHHHHHHHHHHHHHHHHhcCCCcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhc
Confidence 45556654333222211112223344444333 4579999999999999999999999999 899998887776555556
Q ss_pred CCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccChHhHH-HHHHHhhCCCceEEEEcCCC
Q 018529 214 GVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMI-SAFECVHDGWGVAVLVGVPS 274 (354)
Q Consensus 214 g~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~-~~~~~l~~~~g~~v~~g~~~ 274 (354)
|+..+ + +.+.+ ...|+|+.++|....+. ..+..|+++ +.++.+|...
T Consensus 297 G~~~~-~-------leell-----~~ADIVI~atGt~~iI~~e~~~~MKpG-AiLINvGr~d 344 (476)
T PTZ00075 297 GYQVV-T-------LEDVV-----ETADIFVTATGNKDIITLEHMRRMKNN-AIVGNIGHFD 344 (476)
T ss_pred Cceec-c-------HHHHH-----hcCCEEEECCCcccccCHHHHhccCCC-cEEEEcCCCc
Confidence 65421 1 33322 24899999999877765 899999997 9999998763
No 146
>PRK08324 short chain dehydrogenase; Validated
Probab=97.93 E-value=8.4e-05 Score=74.03 Aligned_cols=138 Identities=22% Similarity=0.280 Sum_probs=88.0
Q ss_pred ccceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEE
Q 018529 122 STFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV 200 (354)
Q Consensus 122 g~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v 200 (354)
-++.+|..+++..++.+ +..+.+++..-. .......+|+++||+|+ |++|...++.+...|+ +|+++
T Consensus 385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~----------~~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~ 452 (681)
T PRK08324 385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQR----------MPKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLA 452 (681)
T ss_pred hhcCCccCCChhhhcce-eeehhhhhhhhc----------CCCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEE
Confidence 36678888888777777 666666664211 00122346899999986 9999999999999999 89999
Q ss_pred cCChhhHHHHHh-cCC--c---eEEcCCCCChhHHHHHHHHc--CCCccEEEEcccC-----------------------
Q 018529 201 DRSSKRFEEAKK-FGV--T---DFVNTSEHDRPIQEVIAEMT--NGGVDRSVECTGN----------------------- 249 (354)
Q Consensus 201 ~~~~~~~~~~~~-lg~--~---~v~~~~~~~~~~~~~i~~~~--~~~~dvv~d~~g~----------------------- 249 (354)
+++.++.+.+.+ ++. . ...|..+.+ .+.+.+.+.. .+++|++|+++|.
T Consensus 453 ~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~-~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~ 531 (681)
T PRK08324 453 DLDEEAAEAAAAELGGPDRALGVACDVTDEA-AVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNAT 531 (681)
T ss_pred eCCHHHHHHHHHHHhccCcEEEEEecCCCHH-HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence 999887665433 432 1 122333321 2323333321 2479999999982
Q ss_pred --hHhHHHHHHHhhC---CCceEEEEcCC
Q 018529 250 --IDNMISAFECVHD---GWGVAVLVGVP 273 (354)
Q Consensus 250 --~~~~~~~~~~l~~---~~g~~v~~g~~ 273 (354)
...++.+++.++. + |++++++..
T Consensus 532 g~~~l~~~~~~~l~~~~~~-g~iV~vsS~ 559 (681)
T PRK08324 532 GHFLVAREAVRIMKAQGLG-GSIVFIASK 559 (681)
T ss_pred HHHHHHHHHHHHHHhcCCC-cEEEEECCc
Confidence 1223444555555 4 789988864
No 147
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.90 E-value=1.2e-05 Score=78.28 Aligned_cols=80 Identities=25% Similarity=0.336 Sum_probs=59.7
Q ss_pred CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC---------------------hhhHHHHHhcCCceEEcCCC-
Q 018529 166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS---------------------SKRFEEAKKFGVTDFVNTSE- 223 (354)
Q Consensus 166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~---------------------~~~~~~~~~lg~~~v~~~~~- 223 (354)
..++|++|+|+|+|++|+++++.++..|+ +|++++.. +++.++++++|++..++...
T Consensus 133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~ 211 (564)
T PRK12771 133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG 211 (564)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence 46789999999999999999999999999 78888742 35667788899887766433
Q ss_pred CChhHHHHHHHHcCCCccEEEEcccChH
Q 018529 224 HDRPIQEVIAEMTNGGVDRSVECTGNID 251 (354)
Q Consensus 224 ~~~~~~~~i~~~~~~~~dvv~d~~g~~~ 251 (354)
.+... +.+ ..++|+||+++|...
T Consensus 212 ~~~~~-~~~----~~~~D~Vi~AtG~~~ 234 (564)
T PRK12771 212 EDITL-EQL----EGEFDAVFVAIGAQL 234 (564)
T ss_pred CcCCH-HHH----HhhCCEEEEeeCCCC
Confidence 21111 111 126999999999753
No 148
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.90 E-value=0.00016 Score=58.25 Aligned_cols=104 Identities=21% Similarity=0.348 Sum_probs=75.1
Q ss_pred hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH----hcCCceEEcCCCCChhHHHHHHHHcCC
Q 018529 163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAEMTNG 238 (354)
Q Consensus 163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~----~lg~~~v~~~~~~~~~~~~~i~~~~~~ 238 (354)
.+.++++|+.++=+|+|. |..++++|...-..+|+++++++++.++.+ +||.+.+...... ..+.+..+.
T Consensus 28 s~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~---Ap~~L~~~~-- 101 (187)
T COG2242 28 SKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGD---APEALPDLP-- 101 (187)
T ss_pred HhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEecc---chHhhcCCC--
Confidence 456889999887789864 777788885554459999999999998874 5898766544443 333343332
Q ss_pred CccEEEEcccC--hHhHHHHHHHhhCCCceEEEEcCC
Q 018529 239 GVDRSVECTGN--IDNMISAFECVHDGWGVAVLVGVP 273 (354)
Q Consensus 239 ~~dvv~d~~g~--~~~~~~~~~~l~~~~g~~v~~g~~ 273 (354)
.+|.+|---|. +..++.+|..|+++ |++|.-...
T Consensus 102 ~~daiFIGGg~~i~~ile~~~~~l~~g-grlV~nait 137 (187)
T COG2242 102 SPDAIFIGGGGNIEEILEAAWERLKPG-GRLVANAIT 137 (187)
T ss_pred CCCEEEECCCCCHHHHHHHHHHHcCcC-CeEEEEeec
Confidence 59999976543 35788999999997 998866543
No 149
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.80 E-value=0.00056 Score=60.39 Aligned_cols=96 Identities=20% Similarity=0.300 Sum_probs=70.5
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529 169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 248 (354)
Q Consensus 169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g 248 (354)
.|++++|+|.|.+|.+.+..++.+|+ +|++.++++++.+.+.++|...+ . +. .+.+.. ..+|+|+++++
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~~-~-------~~-~l~~~l-~~aDiVint~P 218 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIPF-P-------LN-KLEEKV-AEIDIVINTIP 218 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeee-c-------HH-HHHHHh-ccCCEEEECCC
Confidence 47899999999999999999999999 89999999988887777775422 1 11 122221 25899999987
Q ss_pred ChHhHHHHHHHhhCCCceEEEEcCCCCC
Q 018529 249 NIDNMISAFECVHDGWGVAVLVGVPSKD 276 (354)
Q Consensus 249 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~ 276 (354)
..-.-...++.++++ ..++.++..+.+
T Consensus 219 ~~ii~~~~l~~~k~~-aliIDlas~Pg~ 245 (287)
T TIGR02853 219 ALVLTADVLSKLPKH-AVIIDLASKPGG 245 (287)
T ss_pred hHHhCHHHHhcCCCC-eEEEEeCcCCCC
Confidence 632234567778886 778878765533
No 150
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.75 E-value=0.00013 Score=56.72 Aligned_cols=74 Identities=26% Similarity=0.368 Sum_probs=54.5
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCc--eEEcCCCCChhHHHHHHHHcCCCccEEE
Q 018529 168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVT--DFVNTSEHDRPIQEVIAEMTNGGVDRSV 244 (354)
Q Consensus 168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~--~v~~~~~~~~~~~~~i~~~~~~~~dvv~ 244 (354)
-++.+++|+|+|++|.+++..+...|+++|+.+.|+.+|.+.+ ++++.. .++.+.+ +.+.+ ..+|+||
T Consensus 10 l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~----~~~~~-----~~~DivI 80 (135)
T PF01488_consen 10 LKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED----LEEAL-----QEADIVI 80 (135)
T ss_dssp GTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG----HCHHH-----HTESEEE
T ss_pred cCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH----HHHHH-----hhCCeEE
Confidence 3589999999999999999999999998899999999887765 445322 2344433 22222 1589999
Q ss_pred EcccCh
Q 018529 245 ECTGNI 250 (354)
Q Consensus 245 d~~g~~ 250 (354)
+|++.+
T Consensus 81 ~aT~~~ 86 (135)
T PF01488_consen 81 NATPSG 86 (135)
T ss_dssp E-SSTT
T ss_pred EecCCC
Confidence 998874
No 151
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.73 E-value=0.00012 Score=64.94 Aligned_cols=97 Identities=22% Similarity=0.275 Sum_probs=64.9
Q ss_pred CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhc----CCce-EEcCCCCChhHHHHHHHHcCCCcc
Q 018529 167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTD-FVNTSEHDRPIQEVIAEMTNGGVD 241 (354)
Q Consensus 167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~l----g~~~-v~~~~~~~~~~~~~i~~~~~~~~d 241 (354)
.+++++||-+|+|. |.+++.+++ .|+.+|++++.++...+.+++. +... +..... + ......++||
T Consensus 157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~-~------~~~~~~~~fD 227 (288)
T TIGR00406 157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI-Y------LEQPIEGKAD 227 (288)
T ss_pred cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec-c------cccccCCCce
Confidence 46789999999987 888877765 5766999999999888777652 2211 111111 0 1112234799
Q ss_pred EEEEcccCh---HhHHHHHHHhhCCCceEEEEcCC
Q 018529 242 RSVECTGNI---DNMISAFECVHDGWGVAVLVGVP 273 (354)
Q Consensus 242 vv~d~~g~~---~~~~~~~~~l~~~~g~~v~~g~~ 273 (354)
+|+...... ..+..+.+.|+++ |.+++.|..
T Consensus 228 lVvan~~~~~l~~ll~~~~~~Lkpg-G~li~sgi~ 261 (288)
T TIGR00406 228 VIVANILAEVIKELYPQFSRLVKPG-GWLILSGIL 261 (288)
T ss_pred EEEEecCHHHHHHHHHHHHHHcCCC-cEEEEEeCc
Confidence 998754332 4566778899997 999887654
No 152
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.69 E-value=0.00044 Score=61.85 Aligned_cols=102 Identities=23% Similarity=0.291 Sum_probs=73.3
Q ss_pred hhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHH----hcCCceEEcCCCCChhHHHHHHHHc
Q 018529 162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAEMT 236 (354)
Q Consensus 162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~----~lg~~~v~~~~~~~~~~~~~i~~~~ 236 (354)
.+...++++++||.+|+| .|..++.+++..+. ..|++++.+++..+.++ ++|.+.+..... + ..+.+...
T Consensus 73 l~~L~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~g-D--~~~~~~~~- 147 (322)
T PRK13943 73 MEWVGLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCG-D--GYYGVPEF- 147 (322)
T ss_pred HHhcCCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC-C--hhhccccc-
Confidence 455678899999999998 59999999998764 37999999998766654 467655433322 2 22222111
Q ss_pred CCCccEEEEcccChHhHHHHHHHhhCCCceEEEE
Q 018529 237 NGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV 270 (354)
Q Consensus 237 ~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~ 270 (354)
+.+|+|+.+.+........++.|+++ |+++..
T Consensus 148 -~~fD~Ii~~~g~~~ip~~~~~~Lkpg-G~Lvv~ 179 (322)
T PRK13943 148 -APYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP 179 (322)
T ss_pred -CCccEEEECCchHHhHHHHHHhcCCC-CEEEEE
Confidence 36999999888766677888999997 987763
No 153
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.67 E-value=0.00073 Score=56.38 Aligned_cols=102 Identities=22% Similarity=0.414 Sum_probs=71.2
Q ss_pred hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHH----hcC-CceEEcCCCCChhHHHHHHHHc
Q 018529 163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAK----KFG-VTDFVNTSEHDRPIQEVIAEMT 236 (354)
Q Consensus 163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~----~lg-~~~v~~~~~~~~~~~~~i~~~~ 236 (354)
....+.++++||.+|+|. |.+++.+|+..+. .+|++++.+++..+.++ ++| .+.+.....+ ..+.+...
T Consensus 34 ~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~d---~~~~l~~~- 108 (198)
T PRK00377 34 SKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKGE---APEILFTI- 108 (198)
T ss_pred HHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEec---hhhhHhhc-
Confidence 456789999999999987 9999999987653 38999999998888664 356 3333222221 22223222
Q ss_pred CCCccEEEEcccC---hHhHHHHHHHhhCCCceEEEE
Q 018529 237 NGGVDRSVECTGN---IDNMISAFECVHDGWGVAVLV 270 (354)
Q Consensus 237 ~~~~dvv~d~~g~---~~~~~~~~~~l~~~~g~~v~~ 270 (354)
.+.+|.||...+. ...++.+.+.|+++ |++++.
T Consensus 109 ~~~~D~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~ 144 (198)
T PRK00377 109 NEKFDRIFIGGGSEKLKEIISASWEIIKKG-GRIVID 144 (198)
T ss_pred CCCCCEEEECCCcccHHHHHHHHHHHcCCC-cEEEEE
Confidence 2379999985543 35677888899997 998753
No 154
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.66 E-value=0.00072 Score=55.31 Aligned_cols=82 Identities=17% Similarity=0.270 Sum_probs=61.7
Q ss_pred CCCCeEEEEcC--ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcCCc-eEEcCCCCC--hhHHHHHHHHcCCCcc
Q 018529 168 ERGSSVAVFGL--GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVT-DFVNTSEHD--RPIQEVIAEMTNGGVD 241 (354)
Q Consensus 168 ~~~~~vlI~G~--g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~lg~~-~v~~~~~~~--~~~~~~i~~~~~~~~d 241 (354)
...+.|||+|+ |++|++.+.-....|+ .|+++.|.-++...+. ++|.. .-+|..+++ ..+...+++.+.|+.|
T Consensus 5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld 83 (289)
T KOG1209|consen 5 SQPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLD 83 (289)
T ss_pred cCCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceE
Confidence 35678999975 9999998888888899 9999999999888765 67763 234444433 3355667777778999
Q ss_pred EEEEcccCh
Q 018529 242 RSVECTGNI 250 (354)
Q Consensus 242 vv~d~~g~~ 250 (354)
+.++.+|.+
T Consensus 84 ~L~NNAG~~ 92 (289)
T KOG1209|consen 84 LLYNNAGQS 92 (289)
T ss_pred EEEcCCCCC
Confidence 999987753
No 155
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.61 E-value=0.0005 Score=63.30 Aligned_cols=113 Identities=22% Similarity=0.238 Sum_probs=77.6
Q ss_pred cccchhhhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHH
Q 018529 150 LSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQ 229 (354)
Q Consensus 150 l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~ 229 (354)
+..+....+..+.+..+++++++||-+|+| .|.++..+++..|. +|++++.+++..+.+++.....-+.....+ +.
T Consensus 148 L~~Aq~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~~D--~~ 223 (383)
T PRK11705 148 LEEAQEAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRLQD--YR 223 (383)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEECc--hh
Confidence 433444555556677889999999999986 57788889988888 999999999999998764321111111111 21
Q ss_pred HHHHHHcCCCccEEEEc-----ccC---hHhHHHHHHHhhCCCceEEEEcC
Q 018529 230 EVIAEMTNGGVDRSVEC-----TGN---IDNMISAFECVHDGWGVAVLVGV 272 (354)
Q Consensus 230 ~~i~~~~~~~~dvv~d~-----~g~---~~~~~~~~~~l~~~~g~~v~~g~ 272 (354)
.+ .+.+|.|+.. +|. ...++.+.+.|+++ |++++...
T Consensus 224 ----~l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpG-G~lvl~~i 268 (383)
T PRK11705 224 ----DL-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPD-GLFLLHTI 268 (383)
T ss_pred ----hc-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCC-cEEEEEEc
Confidence 11 2479988743 332 35678888999997 99887643
No 156
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.56 E-value=0.00048 Score=57.89 Aligned_cols=79 Identities=20% Similarity=0.370 Sum_probs=59.3
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCC----ceEEcCCCCChhHHHHHHHHcCC--Cc
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGV----TDFVNTSEHDRPIQEVIAEMTNG--GV 240 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~----~~v~~~~~~~~~~~~~i~~~~~~--~~ 240 (354)
+++.++|+|+ +++|.+.++.....|+ +|+.+.|.+++++.+ .+++. ...+|..+.. +..+.+..+... .+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~-~~~~~i~~~~~~~g~i 82 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTDRA-AVEAAIEALPEEFGRI 82 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCCHH-HHHHHHHHHHHhhCcc
Confidence 3478899998 9999999999999999 999999999998866 45772 2345555432 344455555444 69
Q ss_pred cEEEEcccC
Q 018529 241 DRSVECTGN 249 (354)
Q Consensus 241 dvv~d~~g~ 249 (354)
|+.++.+|.
T Consensus 83 DiLvNNAGl 91 (246)
T COG4221 83 DILVNNAGL 91 (246)
T ss_pred cEEEecCCC
Confidence 999998884
No 157
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=97.56 E-value=0.00017 Score=60.37 Aligned_cols=102 Identities=22% Similarity=0.299 Sum_probs=68.4
Q ss_pred hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCc-EEEEEcCChhhHHHH----HhcCCceEE-cCCCCChhHHHHHHH
Q 018529 161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEA----KKFGVTDFV-NTSEHDRPIQEVIAE 234 (354)
Q Consensus 161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~-~vi~v~~~~~~~~~~----~~lg~~~v~-~~~~~~~~~~~~i~~ 234 (354)
+.+...+++|++||-+|+|. |+.++-+++..|.. +|+++++.++-.+.+ ++++...+. ...+....+ .
T Consensus 64 ~l~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g~----~- 137 (209)
T PF01135_consen 64 MLEALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSEGW----P- 137 (209)
T ss_dssp HHHHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGGTT----G-
T ss_pred HHHHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhhcc----c-
Confidence 45677899999999999874 88899999988753 799999988755554 446765432 222211111 1
Q ss_pred HcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEE
Q 018529 235 MTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV 270 (354)
Q Consensus 235 ~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~ 270 (354)
..++||.|+-+.+.++.-...++.|+++ |+++.-
T Consensus 138 -~~apfD~I~v~~a~~~ip~~l~~qL~~g-GrLV~p 171 (209)
T PF01135_consen 138 -EEAPFDRIIVTAAVPEIPEALLEQLKPG-GRLVAP 171 (209)
T ss_dssp -GG-SEEEEEESSBBSS--HHHHHTEEEE-EEEEEE
T ss_pred -cCCCcCEEEEeeccchHHHHHHHhcCCC-cEEEEE
Confidence 1137999999888767778899999997 998863
No 158
>PRK06182 short chain dehydrogenase; Validated
Probab=97.45 E-value=0.0021 Score=56.51 Aligned_cols=79 Identities=20% Similarity=0.389 Sum_probs=54.8
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceE-EcCCCCChhHHHHHHHHc--CCCccEEE
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMT--NGGVDRSV 244 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~i~~~~--~~~~dvv~ 244 (354)
++++++|+|+ |.+|...++.+...|+ +|+++++++++.+.+.+.+...+ .|..+.+ .+.+.+++.. .+++|+++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~-~~~~~~~~~~~~~~~id~li 79 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTDEA-SIKAAVDTIIAEEGRIDVLV 79 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCCHH-HHHHHHHHHHHhcCCCCEEE
Confidence 4678999997 9999999998888899 89999999888766655554332 3433322 2333333322 23799999
Q ss_pred EcccC
Q 018529 245 ECTGN 249 (354)
Q Consensus 245 d~~g~ 249 (354)
+++|.
T Consensus 80 ~~ag~ 84 (273)
T PRK06182 80 NNAGY 84 (273)
T ss_pred ECCCc
Confidence 99874
No 159
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=97.43 E-value=0.0029 Score=54.95 Aligned_cols=109 Identities=23% Similarity=0.307 Sum_probs=77.8
Q ss_pred hhhhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCc-eE-EcCCCCChhHH
Q 018529 156 TGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DF-VNTSEHDRPIQ 229 (354)
Q Consensus 156 ~a~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~-~v-~~~~~~~~~~~ 229 (354)
.++..+.++.+++||++||=+|||- |.+++.+|+..|+ +|++++-|++..+.+++ .|.. .+ +...+
T Consensus 59 ~k~~~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d------ 130 (283)
T COG2230 59 AKLDLILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQD------ 130 (283)
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEecc------
Confidence 3444567889999999999999976 7888899999999 99999999998887654 5654 22 11111
Q ss_pred HHHHHHcCCCccEEEE-----cccC---hHhHHHHHHHhhCCCceEEEEcCCCCC
Q 018529 230 EVIAEMTNGGVDRSVE-----CTGN---IDNMISAFECVHDGWGVAVLVGVPSKD 276 (354)
Q Consensus 230 ~~i~~~~~~~~dvv~d-----~~g~---~~~~~~~~~~l~~~~g~~v~~g~~~~~ 276 (354)
.+.+. +.||-|+. .+|. +..+..+.+.|+++ |++.+-......
T Consensus 131 --~rd~~-e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~-G~~llh~I~~~~ 181 (283)
T COG2230 131 --YRDFE-EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPG-GRMLLHSITGPD 181 (283)
T ss_pred --ccccc-cccceeeehhhHHHhCcccHHHHHHHHHhhcCCC-ceEEEEEecCCC
Confidence 11111 24776653 4443 46788999999998 999887766544
No 160
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.43 E-value=0.0025 Score=56.02 Aligned_cols=77 Identities=21% Similarity=0.381 Sum_probs=54.4
Q ss_pred CeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceE-EcCCCCChhHHHHHHHHc--CCCccEEEEc
Q 018529 171 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMT--NGGVDRSVEC 246 (354)
Q Consensus 171 ~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~i~~~~--~~~~dvv~d~ 246 (354)
+++||+|+ |.+|...++.+...|+ +|++++++.++.+.+...+...+ .|..+.+ .+.+.+.... .+++|+++++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~id~vi~~ 79 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVNDGA-ALARLAEELEAEHGGLDVLINN 79 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCCHH-HHHHHHHHHHHhcCCCCEEEEC
Confidence 47899987 9999999999988999 89999999888777666665433 3443322 2333333332 2379999999
Q ss_pred ccC
Q 018529 247 TGN 249 (354)
Q Consensus 247 ~g~ 249 (354)
+|.
T Consensus 80 ag~ 82 (274)
T PRK05693 80 AGY 82 (274)
T ss_pred CCC
Confidence 883
No 161
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.40 E-value=0.003 Score=54.14 Aligned_cols=103 Identities=24% Similarity=0.365 Sum_probs=66.3
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-Hhc---CCceEE--cCCCCChhHHHHHHHHc--CCC
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKF---GVTDFV--NTSEHDRPIQEVIAEMT--NGG 239 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~l---g~~~v~--~~~~~~~~~~~~i~~~~--~~~ 239 (354)
+++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ .++ +..+.+ |..+. ..+.+.+++.. .++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~ 81 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSST-ESARNVIEKAAKVLNA 81 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCH-HHHHHHHHHHHHHhCC
Confidence 4689999987 9999999999999999 899999988877655 222 222222 22221 12322232221 136
Q ss_pred ccEEEEcccChH-----------------------hHHHHHHHhhCCCceEEEEcCCC
Q 018529 240 VDRSVECTGNID-----------------------NMISAFECVHDGWGVAVLVGVPS 274 (354)
Q Consensus 240 ~dvv~d~~g~~~-----------------------~~~~~~~~l~~~~g~~v~~g~~~ 274 (354)
+|.++.+.|... .++.....+..+ |++++++...
T Consensus 82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~~ 138 (238)
T PRK05786 82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG-SSIVLVSSMS 138 (238)
T ss_pred CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC-CEEEEEecch
Confidence 899998887421 134455566676 8899888653
No 162
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.40 E-value=0.0019 Score=54.45 Aligned_cols=103 Identities=25% Similarity=0.293 Sum_probs=70.0
Q ss_pred hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHH
Q 018529 161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEM 235 (354)
Q Consensus 161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~ 235 (354)
+.....++++++||-+|+|. |+.+..+++..+. .+|++++.+++-.+.+++ +|...+..... + ..+.. .
T Consensus 68 ~~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~g-d--~~~~~--~ 141 (212)
T PRK13942 68 MCELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVG-D--GTLGY--E 141 (212)
T ss_pred HHHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEEC-C--cccCC--C
Confidence 44567789999999999874 7788888887763 299999999988776654 45433211111 1 00000 0
Q ss_pred cCCCccEEEEcccChHhHHHHHHHhhCCCceEEEE
Q 018529 236 TNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV 270 (354)
Q Consensus 236 ~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~ 270 (354)
..+.||+|+-....+......++.|+++ |+++..
T Consensus 142 ~~~~fD~I~~~~~~~~~~~~l~~~Lkpg-G~lvi~ 175 (212)
T PRK13942 142 ENAPYDRIYVTAAGPDIPKPLIEQLKDG-GIMVIP 175 (212)
T ss_pred cCCCcCEEEECCCcccchHHHHHhhCCC-cEEEEE
Confidence 1237999987665556778889999997 998764
No 163
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.37 E-value=0.0025 Score=58.08 Aligned_cols=97 Identities=19% Similarity=0.233 Sum_probs=68.9
Q ss_pred CeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcC---Cc-eEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529 171 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG---VT-DFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 246 (354)
Q Consensus 171 ~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg---~~-~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~ 246 (354)
.+|||+|+|.+|..+++.+-+.|..+|++.+++.++.+.+.... .. ..+|..+.+ ++.+.++ ++|+||++
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~-al~~li~-----~~d~VIn~ 75 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVD-ALVALIK-----DFDLVINA 75 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChH-HHHHHHh-----cCCEEEEe
Confidence 47899999999999999988888459999999999999887664 22 234444322 2333332 35999999
Q ss_pred ccChHhHHHHHHHhhCCCceEEEEcCCC
Q 018529 247 TGNIDNMISAFECVHDGWGVAVLVGVPS 274 (354)
Q Consensus 247 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~ 274 (354)
.+.......+-.|++.+ -.++......
T Consensus 76 ~p~~~~~~i~ka~i~~g-v~yvDts~~~ 102 (389)
T COG1748 76 APPFVDLTILKACIKTG-VDYVDTSYYE 102 (389)
T ss_pred CCchhhHHHHHHHHHhC-CCEEEcccCC
Confidence 98866666666677775 5666665543
No 164
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=97.35 E-value=0.00062 Score=59.58 Aligned_cols=101 Identities=23% Similarity=0.264 Sum_probs=63.9
Q ss_pred hhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH----hcCCc-eE-EcCCCCChhHHHHHH
Q 018529 160 ATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVT-DF-VNTSEHDRPIQEVIA 233 (354)
Q Consensus 160 ~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~----~lg~~-~v-~~~~~~~~~~~~~i~ 233 (354)
.+.+++++++|++||-+|+| -|.+++.+|+..|+ +|++++.+++..++++ +.|.. .+ +...+ + +
T Consensus 53 ~~~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D----~----~ 122 (273)
T PF02353_consen 53 LLCEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRLQD----Y----R 122 (273)
T ss_dssp HHHTTTT--TT-EEEEES-T-TSHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-----G----G
T ss_pred HHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEee----c----c
Confidence 35688899999999999998 57778889998899 9999999999988875 35642 11 22221 1 1
Q ss_pred HHcCCCccEEEE-----cccC---hHhHHHHHHHhhCCCceEEEEcC
Q 018529 234 EMTNGGVDRSVE-----CTGN---IDNMISAFECVHDGWGVAVLVGV 272 (354)
Q Consensus 234 ~~~~~~~dvv~d-----~~g~---~~~~~~~~~~l~~~~g~~v~~g~ 272 (354)
++. +.||.|+. .+|. +..+..+.+.|+|+ |++++-..
T Consensus 123 ~~~-~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~Lkpg-G~~~lq~i 167 (273)
T PF02353_consen 123 DLP-GKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPG-GRLVLQTI 167 (273)
T ss_dssp G----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETT-EEEEEEEE
T ss_pred ccC-CCCCEEEEEechhhcChhHHHHHHHHHHHhcCCC-cEEEEEec
Confidence 111 27898865 3332 35688899999997 99875543
No 165
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.35 E-value=0.0032 Score=51.65 Aligned_cols=94 Identities=22% Similarity=0.309 Sum_probs=63.8
Q ss_pred EEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccC--
Q 018529 173 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN-- 249 (354)
Q Consensus 173 vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~-- 249 (354)
|+|+|+ |.+|...++.+...|. +|+++.|++++.+. ..++..+ ..+-.+ . +.+.+... ++|+||.++|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~~~-~~d~~d--~-~~~~~al~-~~d~vi~~~~~~~ 72 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVEII-QGDLFD--P-DSVKAALK-GADAVIHAAGPPP 72 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEEEE-ESCTTC--H-HHHHHHHT-TSSEEEECCHSTT
T ss_pred eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccccc-eeeehh--h-hhhhhhhh-hcchhhhhhhhhc
Confidence 789998 9999999999999997 99999999998777 4454433 333333 2 23333322 69999999984
Q ss_pred --hHhHHHHHHHhhCC-CceEEEEcCCC
Q 018529 250 --IDNMISAFECVHDG-WGVAVLVGVPS 274 (354)
Q Consensus 250 --~~~~~~~~~~l~~~-~g~~v~~g~~~ 274 (354)
.......++.++.. -.++++++...
T Consensus 73 ~~~~~~~~~~~a~~~~~~~~~v~~s~~~ 100 (183)
T PF13460_consen 73 KDVDAAKNIIEAAKKAGVKRVVYLSSAG 100 (183)
T ss_dssp THHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred ccccccccccccccccccccceeeeccc
Confidence 23455555555443 14777776543
No 166
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.33 E-value=0.0018 Score=54.29 Aligned_cols=101 Identities=17% Similarity=0.204 Sum_probs=68.2
Q ss_pred hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcC-CcEEEEEcCChhhHHHHHh----cCCc---eEEcCCCCChhHHHHH
Q 018529 161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVT---DFVNTSEHDRPIQEVI 232 (354)
Q Consensus 161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g-~~~vi~v~~~~~~~~~~~~----lg~~---~v~~~~~~~~~~~~~i 232 (354)
+.+...++++++||-+|+|. |..+..+++..+ ..+|++++.+++-.+.+++ .+.. .++.. + ..+.+
T Consensus 64 ~~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~-d----~~~~~ 137 (205)
T PRK13944 64 MCELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHG-D----GKRGL 137 (205)
T ss_pred HHHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEC-C----cccCC
Confidence 34566788999999999875 778888888764 2389999999987666543 4542 12221 1 11111
Q ss_pred HHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEE
Q 018529 233 AEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV 270 (354)
Q Consensus 233 ~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~ 270 (354)
. ..+.||+|+-+.........+++.|+++ |++++.
T Consensus 138 ~--~~~~fD~Ii~~~~~~~~~~~l~~~L~~g-G~lvi~ 172 (205)
T PRK13944 138 E--KHAPFDAIIVTAAASTIPSALVRQLKDG-GVLVIP 172 (205)
T ss_pred c--cCCCccEEEEccCcchhhHHHHHhcCcC-cEEEEE
Confidence 1 1237999987766556667888999997 998764
No 167
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=97.32 E-value=0.0027 Score=48.30 Aligned_cols=103 Identities=21% Similarity=0.345 Sum_probs=68.3
Q ss_pred hhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHcC
Q 018529 162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN 237 (354)
Q Consensus 162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~ 237 (354)
.....+.++++|+-+|+|. |..+..+++..+..+|++++.++...+.+++ ++...+..... + ....... ..
T Consensus 12 ~~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~-~--~~~~~~~-~~ 86 (124)
T TIGR02469 12 LSKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEG-D--APEALED-SL 86 (124)
T ss_pred HHHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEec-c--ccccChh-hc
Confidence 3445677788899999976 8889999998754599999999988777643 44432211111 1 1000111 12
Q ss_pred CCccEEEEcccC---hHhHHHHHHHhhCCCceEEEE
Q 018529 238 GGVDRSVECTGN---IDNMISAFECVHDGWGVAVLV 270 (354)
Q Consensus 238 ~~~dvv~d~~g~---~~~~~~~~~~l~~~~g~~v~~ 270 (354)
+.+|+|+...+. ...++.+.+.|+++ |++++.
T Consensus 87 ~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~li~~ 121 (124)
T TIGR02469 87 PEPDRVFIGGSGGLLQEILEAIWRRLRPG-GRIVLN 121 (124)
T ss_pred CCCCEEEECCcchhHHHHHHHHHHHcCCC-CEEEEE
Confidence 379999976532 24688899999997 998765
No 168
>PRK12742 oxidoreductase; Provisional
Probab=97.31 E-value=0.0062 Score=52.12 Aligned_cols=77 Identities=22% Similarity=0.282 Sum_probs=49.4
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcC-ChhhHHHH-HhcCCceE-EcCCCCChhHHHHHHHHcCCCccEEE
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEA-KKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSV 244 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~-~~~~~~~~-~~lg~~~v-~~~~~~~~~~~~~i~~~~~~~~dvv~ 244 (354)
+++++||+|+ |.+|...++.+...|+ +|+.+.+ ++++.+.+ .+++...+ .|..+. ..+.+.+.+. +++|+++
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~-~~~~~~~~~~--~~id~li 80 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAVQTDSADR-DAVIDVVRKS--GALDILV 80 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEEecCCCCH-HHHHHHHHHh--CCCcEEE
Confidence 4689999987 9999999999988999 6766543 44544433 44565432 222221 2233333332 4689999
Q ss_pred EcccC
Q 018529 245 ECTGN 249 (354)
Q Consensus 245 d~~g~ 249 (354)
+++|.
T Consensus 81 ~~ag~ 85 (237)
T PRK12742 81 VNAGI 85 (237)
T ss_pred ECCCC
Confidence 99874
No 169
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.31 E-value=0.0019 Score=52.70 Aligned_cols=79 Identities=23% Similarity=0.333 Sum_probs=58.4
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCC---ceEEcCCCCC--hhHHHHHHHHcCCCccE
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV---TDFVNTSEHD--RPIQEVIAEMTNGGVDR 242 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~---~~v~~~~~~~--~~~~~~i~~~~~~~~dv 242 (354)
.|.+|||+|+ +++|+..++--..+|- .||.+.|++++++.++.... ..+.|..+.+ .++.+++++..+ ..++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P-~lNv 81 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYP-NLNV 81 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCC-chhe
Confidence 4789999975 9999998888888887 99999999999998877433 2344444433 345555555432 5799
Q ss_pred EEEcccC
Q 018529 243 SVECTGN 249 (354)
Q Consensus 243 v~d~~g~ 249 (354)
+++++|-
T Consensus 82 liNNAGI 88 (245)
T COG3967 82 LINNAGI 88 (245)
T ss_pred eeecccc
Confidence 9998885
No 170
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.30 E-value=0.0021 Score=56.69 Aligned_cols=79 Identities=19% Similarity=0.326 Sum_probs=55.7
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceE-EcCCCCChhHHHHHH---HHcCCCccEE
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIA---EMTNGGVDRS 243 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~i~---~~~~~~~dvv 243 (354)
.++++||+|+ |.+|...++.+...|+ +|+++++++++.+.+.+.+...+ .|..+.. ++.+.+. +...+.+|++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~-~~~~~~~~~~~~~~g~id~l 80 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAEPE-SIAALVAQVLELSGGRLDAL 80 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCCHH-HHHHHHHHHHHHcCCCccEE
Confidence 4578999997 9999999988888899 89999999988887776665433 3433321 2222233 2233479999
Q ss_pred EEcccC
Q 018529 244 VECTGN 249 (354)
Q Consensus 244 ~d~~g~ 249 (354)
++++|.
T Consensus 81 i~~Ag~ 86 (277)
T PRK05993 81 FNNGAY 86 (277)
T ss_pred EECCCc
Confidence 998763
No 171
>PRK14967 putative methyltransferase; Provisional
Probab=97.27 E-value=0.017 Score=49.19 Aligned_cols=98 Identities=23% Similarity=0.170 Sum_probs=64.5
Q ss_pred hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHcCC
Q 018529 163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNG 238 (354)
Q Consensus 163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~~ 238 (354)
....++++++||-.|+|. |..++.+++. +..+|++++.+++..+.+++ .+....+.. .+ +.+. +..+
T Consensus 30 ~~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~--~d--~~~~---~~~~ 100 (223)
T PRK14967 30 AAEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRR--GD--WARA---VEFR 100 (223)
T ss_pred HhcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEE--Cc--hhhh---ccCC
Confidence 344678899999999987 8888888875 55599999999988876644 344322211 11 3222 1224
Q ss_pred CccEEEEcccC---------------------------hHhHHHHHHHhhCCCceEEEE
Q 018529 239 GVDRSVECTGN---------------------------IDNMISAFECVHDGWGVAVLV 270 (354)
Q Consensus 239 ~~dvv~d~~g~---------------------------~~~~~~~~~~l~~~~g~~v~~ 270 (354)
.||+|+...+. ...+..+.+.|+++ |+++++
T Consensus 101 ~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~g-G~l~~~ 158 (223)
T PRK14967 101 PFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPG-GSLLLV 158 (223)
T ss_pred CeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCC-cEEEEE
Confidence 79999874220 12345677889997 998865
No 172
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=97.24 E-value=0.0061 Score=50.36 Aligned_cols=101 Identities=19% Similarity=0.163 Sum_probs=62.5
Q ss_pred hcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceE-EcCCCCChhHHHHHHHHcCC-Ccc
Q 018529 164 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNG-GVD 241 (354)
Q Consensus 164 ~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~i~~~~~~-~~d 241 (354)
...+++|++||.+|+|+-+.......+..+..+|++++.++.+ ...++..+ .+..+. ...+.+.+.... ++|
T Consensus 27 ~~~i~~g~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~~--~~~~~l~~~~~~~~~D 100 (188)
T TIGR00438 27 FKLIKPGDTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTDE--EVLNKIRERVGDDKVD 100 (188)
T ss_pred hcccCCCCEEEEecCCCCHHHHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCCh--hHHHHHHHHhCCCCcc
Confidence 3457899999999998755544333333344489999998864 11233322 122221 234445554444 899
Q ss_pred EEEEc-c----cC------------hHhHHHHHHHhhCCCceEEEEc
Q 018529 242 RSVEC-T----GN------------IDNMISAFECVHDGWGVAVLVG 271 (354)
Q Consensus 242 vv~d~-~----g~------------~~~~~~~~~~l~~~~g~~v~~g 271 (354)
+|+.. . |. ...+..+.++|+++ |++++..
T Consensus 101 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lvi~~ 146 (188)
T TIGR00438 101 VVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPK-GNFVVKV 146 (188)
T ss_pred EEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCC-CEEEEEE
Confidence 99952 1 21 24677889999997 9988753
No 173
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=97.19 E-value=0.0074 Score=57.86 Aligned_cols=47 Identities=23% Similarity=0.191 Sum_probs=39.8
Q ss_pred hhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH
Q 018529 163 NVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA 210 (354)
Q Consensus 163 ~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~ 210 (354)
...+.+.|+++||+|+ |.+|...++.+...|+ +|+++.++.++.+.+
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l 120 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESL 120 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHH
Confidence 3456788999999997 9999999999988999 899888998876543
No 174
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=97.19 E-value=0.005 Score=50.68 Aligned_cols=98 Identities=16% Similarity=0.158 Sum_probs=64.3
Q ss_pred CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHcCCCcc
Q 018529 166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGGVD 241 (354)
Q Consensus 166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~~~~d 241 (354)
.++++.+||-+|+|. |..++.+++.....+|++++.+++..+.+++ .+.+.+ .....+ ..+ +.. .+.+|
T Consensus 42 ~l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i-~~~~~d--~~~-~~~--~~~fD 114 (187)
T PRK00107 42 YLPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNV-TVVHGR--AEE-FGQ--EEKFD 114 (187)
T ss_pred hcCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCE-EEEecc--Hhh-CCC--CCCcc
Confidence 355689999999864 6667777765543499999999987776644 555432 222221 211 111 23799
Q ss_pred EEEEccc--ChHhHHHHHHHhhCCCceEEEEc
Q 018529 242 RSVECTG--NIDNMISAFECVHDGWGVAVLVG 271 (354)
Q Consensus 242 vv~d~~g--~~~~~~~~~~~l~~~~g~~v~~g 271 (354)
+|+.... -+..++.+.+.|+++ |+++++-
T Consensus 115 lV~~~~~~~~~~~l~~~~~~LkpG-G~lv~~~ 145 (187)
T PRK00107 115 VVTSRAVASLSDLVELCLPLLKPG-GRFLALK 145 (187)
T ss_pred EEEEccccCHHHHHHHHHHhcCCC-eEEEEEe
Confidence 9996432 235777889999997 9988773
No 175
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.17 E-value=0.0032 Score=54.80 Aligned_cols=110 Identities=21% Similarity=0.293 Sum_probs=69.0
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce-EE----cCCCCChhHHHHHHHHc--
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FV----NTSEHDRPIQEVIAEMT-- 236 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v~----~~~~~~~~~~~~i~~~~-- 236 (354)
.++.|+|+|| +++|.+.+.-.-..|+ +++.+.+..++++.. ++++... ++ |..+.+ +..+.+.+..
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~-~~~~~~~~~~~~ 88 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEE-SVKKFVEWAIRH 88 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHH-HHHHHHHHHHHh
Confidence 5788999998 8999988877778898 666666777776665 3444433 22 222222 2332332221
Q ss_pred CCCccEEEEcccCh-------------------------HhHHHHHHHhhCCC-ceEEEEcCCCCCceee
Q 018529 237 NGGVDRSVECTGNI-------------------------DNMISAFECVHDGW-GVAVLVGVPSKDAVFM 280 (354)
Q Consensus 237 ~~~~dvv~d~~g~~-------------------------~~~~~~~~~l~~~~-g~~v~~g~~~~~~~~~ 280 (354)
-|++|+.++.+|-. .....++..|+... |+++.++...+....+
T Consensus 89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P 158 (282)
T KOG1205|consen 89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLP 158 (282)
T ss_pred cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCC
Confidence 24899999988742 23344566666544 8999998766443333
No 176
>PRK07326 short chain dehydrogenase; Provisional
Probab=97.14 E-value=0.0087 Score=51.21 Aligned_cols=79 Identities=22% Similarity=0.344 Sum_probs=51.0
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCC---ceEE--cCCCCChhHHHHHHHHcC--CC
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGV---TDFV--NTSEHDRPIQEVIAEMTN--GG 239 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~---~~v~--~~~~~~~~~~~~i~~~~~--~~ 239 (354)
++.+++|+|+ |.+|...++.+...|+ +|+++++++++.+.+ +++.. -..+ +..+. ..+.+.+++... ++
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~ 82 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRDE-ADVQRAVDAIVAAFGG 82 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCH-HHHHHHHHHHHHHcCC
Confidence 4688999987 9999998888888899 799998888766544 33321 1122 22221 223333433321 37
Q ss_pred ccEEEEcccC
Q 018529 240 VDRSVECTGN 249 (354)
Q Consensus 240 ~dvv~d~~g~ 249 (354)
+|++|++.|.
T Consensus 83 ~d~vi~~ag~ 92 (237)
T PRK07326 83 LDVLIANAGV 92 (237)
T ss_pred CCEEEECCCC
Confidence 8999998764
No 177
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=97.13 E-value=0.0018 Score=48.35 Aligned_cols=94 Identities=24% Similarity=0.264 Sum_probs=62.5
Q ss_pred CCCeEEEEcCChhHHHHHHHHHH-cCCcEEEEEcCChhhHHHHHhc----CC-ceEEcCCCCChhHHHHHHHHcCCCccE
Q 018529 169 RGSSVAVFGLGAVGLAAAEGARI-AGASRIIGVDRSSKRFEEAKKF----GV-TDFVNTSEHDRPIQEVIAEMTNGGVDR 242 (354)
Q Consensus 169 ~~~~vlI~G~g~~G~~a~~~a~~-~g~~~vi~v~~~~~~~~~~~~l----g~-~~v~~~~~~~~~~~~~i~~~~~~~~dv 242 (354)
|+++||-+|+|. |..++.+++. .+. +|++++.+++..+.+++. +. +++.... .+ + ... ....++||+
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~-~d--~-~~~-~~~~~~~D~ 73 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQ-GD--A-EFD-PDFLEPFDL 73 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEE-SC--C-HGG-TTTSSCEEE
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEE-Cc--c-ccC-cccCCCCCE
Confidence 688999999875 8888888884 566 899999999988887652 22 2222111 11 2 101 111237999
Q ss_pred EEEcc-cC---h------HhHHHHHHHhhCCCceEEEE
Q 018529 243 SVECT-GN---I------DNMISAFECVHDGWGVAVLV 270 (354)
Q Consensus 243 v~d~~-g~---~------~~~~~~~~~l~~~~g~~v~~ 270 (354)
|+... .. . ..++.+.+.|+++ |++++-
T Consensus 74 v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~lvi~ 110 (112)
T PF12847_consen 74 VICSGFTLHFLLPLDERRRVLERIRRLLKPG-GRLVIN 110 (112)
T ss_dssp EEECSGSGGGCCHHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred EEECCCccccccchhHHHHHHHHHHHhcCCC-cEEEEE
Confidence 99876 21 1 2378889999997 988753
No 178
>PRK00536 speE spermidine synthase; Provisional
Probab=97.10 E-value=0.0019 Score=55.87 Aligned_cols=102 Identities=10% Similarity=-0.041 Sum_probs=68.0
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEE-Ec
Q 018529 168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV-EC 246 (354)
Q Consensus 168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~-d~ 246 (354)
...++|||+|+|- |.++-.++|+-. +|+.++.+++-.+.++++-...--..++..-.+...+++...+.+|+|| |+
T Consensus 71 ~~pk~VLIiGGGD-Gg~~REvLkh~~--~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv~l~~~~~~~~~~~fDVIIvDs 147 (262)
T PRK00536 71 KELKEVLIVDGFD-LELAHQLFKYDT--HVDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIICLQ 147 (262)
T ss_pred CCCCeEEEEcCCc-hHHHHHHHCcCC--eeEEEECCHHHHHHHHHHCHHHHHhhcCCCEEEeehhhhccCCcCCEEEEcC
Confidence 4458999998765 556778888753 9999999999999988832110001112111122223333334799986 66
Q ss_pred ccChHhHHHHHHHhhCCCceEEEEcCC
Q 018529 247 TGNIDNMISAFECVHDGWGVAVLVGVP 273 (354)
Q Consensus 247 ~g~~~~~~~~~~~l~~~~g~~v~~g~~ 273 (354)
.-.++..+.+.++|+++ |.++.-+..
T Consensus 148 ~~~~~fy~~~~~~L~~~-Gi~v~Qs~s 173 (262)
T PRK00536 148 EPDIHKIDGLKRMLKED-GVFISVAKH 173 (262)
T ss_pred CCChHHHHHHHHhcCCC-cEEEECCCC
Confidence 77778889999999998 998877543
No 179
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=97.09 E-value=0.0056 Score=51.80 Aligned_cols=103 Identities=19% Similarity=0.268 Sum_probs=68.2
Q ss_pred hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHH
Q 018529 161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEM 235 (354)
Q Consensus 161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~ 235 (354)
+.+...++++++||-+|+|. |..++.+++..+. .+|++++.+++..+.+++ +|.+.+..... + ..+...
T Consensus 69 ~~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~-d--~~~~~~-- 142 (215)
T TIGR00080 69 MTELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVG-D--GTQGWE-- 142 (215)
T ss_pred HHHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEEC-C--cccCCc--
Confidence 34566789999999999874 7777788887653 269999999887776643 45533221111 1 111110
Q ss_pred cCCCccEEEEcccChHhHHHHHHHhhCCCceEEEE
Q 018529 236 TNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV 270 (354)
Q Consensus 236 ~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~ 270 (354)
..+.||+|+-....+.......+.|+++ |++++.
T Consensus 143 ~~~~fD~Ii~~~~~~~~~~~~~~~L~~g-G~lv~~ 176 (215)
T TIGR00080 143 PLAPYDRIYVTAAGPKIPEALIDQLKEG-GILVMP 176 (215)
T ss_pred ccCCCCEEEEcCCcccccHHHHHhcCcC-cEEEEE
Confidence 1137999886655556677888999997 998764
No 180
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.09 E-value=0.0036 Score=51.20 Aligned_cols=92 Identities=30% Similarity=0.371 Sum_probs=65.0
Q ss_pred CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529 167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 246 (354)
Q Consensus 167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~ 246 (354)
--.|.+|.|+|.|.+|...++.++.+|. +|++.+++....+.....+... .+ +.+.+++ .|+|+.+
T Consensus 33 ~l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~~----~~----l~ell~~-----aDiv~~~ 98 (178)
T PF02826_consen 33 ELRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVEY----VS----LDELLAQ-----ADIVSLH 98 (178)
T ss_dssp -STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEEE----SS----HHHHHHH------SEEEE-
T ss_pred ccCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhccccccee----ee----hhhhcch-----hhhhhhh
Confidence 3468999999999999999999999999 9999999888777555555421 11 5444444 6999988
Q ss_pred ccChH-----hHHHHHHHhhCCCceEEEEcCC
Q 018529 247 TGNID-----NMISAFECVHDGWGVAVLVGVP 273 (354)
Q Consensus 247 ~g~~~-----~~~~~~~~l~~~~g~~v~~g~~ 273 (354)
.+..+ .-...++.++++ ..+|.++..
T Consensus 99 ~plt~~T~~li~~~~l~~mk~g-a~lvN~aRG 129 (178)
T PF02826_consen 99 LPLTPETRGLINAEFLAKMKPG-AVLVNVARG 129 (178)
T ss_dssp SSSSTTTTTSBSHHHHHTSTTT-EEEEESSSG
T ss_pred hccccccceeeeeeeeeccccc-eEEEeccch
Confidence 76322 234677888886 777777543
No 181
>PRK12828 short chain dehydrogenase; Provisional
Probab=97.08 E-value=0.011 Score=50.54 Aligned_cols=79 Identities=22% Similarity=0.303 Sum_probs=49.7
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHH----HHhcCCceE-EcCCCCChhHHHHHHHHc--CCCc
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE----AKKFGVTDF-VNTSEHDRPIQEVIAEMT--NGGV 240 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~----~~~lg~~~v-~~~~~~~~~~~~~i~~~~--~~~~ 240 (354)
+++++||+|+ |.+|...++.+...|+ +|+.++++.++.+. +...+...+ .|..+. .++.+.+++.. .+++
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~~ 83 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLVDP-QAARRAVDEVNRQFGRL 83 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecCCH-HHHHHHHHHHHHHhCCc
Confidence 3789999987 9999999998888899 89999887765332 222333222 222221 12222222221 1378
Q ss_pred cEEEEcccC
Q 018529 241 DRSVECTGN 249 (354)
Q Consensus 241 dvv~d~~g~ 249 (354)
|+|+.++|.
T Consensus 84 d~vi~~ag~ 92 (239)
T PRK12828 84 DALVNIAGA 92 (239)
T ss_pred CEEEECCcc
Confidence 999998764
No 182
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.06 E-value=0.0066 Score=48.12 Aligned_cols=93 Identities=28% Similarity=0.300 Sum_probs=61.8
Q ss_pred CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEE
Q 018529 166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE 245 (354)
Q Consensus 166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d 245 (354)
..-.|++++|.|-|.+|.-.++.++.+|+ +|++++.++-+.-.+..-|... .. +.+.+ ...|+++.
T Consensus 19 ~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~v-~~-------~~~a~-----~~adi~vt 84 (162)
T PF00670_consen 19 LMLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFEV-MT-------LEEAL-----RDADIFVT 84 (162)
T ss_dssp S--TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-EE-E--------HHHHT-----TT-SEEEE
T ss_pred eeeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcEe-cC-------HHHHH-----hhCCEEEE
Confidence 35678999999999999999999999999 9999999998777776667642 21 32222 24799999
Q ss_pred cccChHh-HHHHHHHhhCCCceEEEEcCC
Q 018529 246 CTGNIDN-MISAFECVHDGWGVAVLVGVP 273 (354)
Q Consensus 246 ~~g~~~~-~~~~~~~l~~~~g~~v~~g~~ 273 (354)
++|..+. -..-++.|+++ ..+..+|..
T Consensus 85 aTG~~~vi~~e~~~~mkdg-ail~n~Gh~ 112 (162)
T PF00670_consen 85 ATGNKDVITGEHFRQMKDG-AILANAGHF 112 (162)
T ss_dssp -SSSSSSB-HHHHHHS-TT-EEEEESSSS
T ss_pred CCCCccccCHHHHHHhcCC-eEEeccCcC
Confidence 9998664 45778889886 555555543
No 183
>PRK08017 oxidoreductase; Provisional
Probab=97.01 E-value=0.0059 Score=52.94 Aligned_cols=78 Identities=18% Similarity=0.304 Sum_probs=55.1
Q ss_pred CeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceE-EcCCCCC--hhHHHHHHHHcCCCccEEEEc
Q 018529 171 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHD--RPIQEVIAEMTNGGVDRSVEC 246 (354)
Q Consensus 171 ~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v-~~~~~~~--~~~~~~i~~~~~~~~dvv~d~ 246 (354)
+++||+|+ |.+|...++.+...|+ +|++++++.++.+.+++.++..+ .|..+.+ .++.+.+.+...+.+|.++.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ 81 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN 81 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence 57999998 9999999999999999 89999999998888777776443 3333321 112333333333478888888
Q ss_pred ccC
Q 018529 247 TGN 249 (354)
Q Consensus 247 ~g~ 249 (354)
.|.
T Consensus 82 ag~ 84 (256)
T PRK08017 82 AGF 84 (256)
T ss_pred CCC
Confidence 763
No 184
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=97.01 E-value=0.0033 Score=58.39 Aligned_cols=76 Identities=11% Similarity=0.154 Sum_probs=54.7
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529 168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 246 (354)
Q Consensus 168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~ 246 (354)
-.+.++||+|+|.+|.+++..+...|+..++++.|+.++.+.+ .+++...++.+ +.+.+.. ..+|+||+|
T Consensus 179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~--------~~l~~~l-~~aDiVI~a 249 (414)
T PRK13940 179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYL--------SELPQLI-KKADIIIAA 249 (414)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecH--------HHHHHHh-ccCCEEEEC
Confidence 4678999999999999999999999987899999998775544 45652223322 1222211 248999999
Q ss_pred ccChHh
Q 018529 247 TGNIDN 252 (354)
Q Consensus 247 ~g~~~~ 252 (354)
++.+..
T Consensus 250 T~a~~~ 255 (414)
T PRK13940 250 VNVLEY 255 (414)
T ss_pred cCCCCe
Confidence 998654
No 185
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=96.98 E-value=0.013 Score=49.17 Aligned_cols=108 Identities=20% Similarity=0.247 Sum_probs=76.7
Q ss_pred hhcCCCCCCeEEEEcCChhHHHHHHHHHHcC-CcEEEEEcCChhhHHHHHh----cCCce-EEcCCCCChhHHHHHHHHc
Q 018529 163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTD-FVNTSEHDRPIQEVIAEMT 236 (354)
Q Consensus 163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g-~~~vi~v~~~~~~~~~~~~----lg~~~-v~~~~~~~~~~~~~i~~~~ 236 (354)
..++.+..+++|=+|.+ +|+.++.+|..+. -.+++.+++++++.+.+++ .|.+. +......+ ..+.+.+..
T Consensus 53 ~L~~~~~~k~iLEiGT~-~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~gd--al~~l~~~~ 129 (219)
T COG4122 53 LLARLSGPKRILEIGTA-IGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGGD--ALDVLSRLL 129 (219)
T ss_pred HHHHhcCCceEEEeecc-cCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecCc--HHHHHHhcc
Confidence 34566677888878764 5899999999886 3389999999999888765 57654 22222123 666666644
Q ss_pred CCCccEEE-Ecc--cChHhHHHHHHHhhCCCceEEEEcCCC
Q 018529 237 NGGVDRSV-ECT--GNIDNMISAFECVHDGWGVAVLVGVPS 274 (354)
Q Consensus 237 ~~~~dvv~-d~~--g~~~~~~~~~~~l~~~~g~~v~~g~~~ 274 (354)
.+.||+|| |+. -.+..++.+++.|+++ |.++.-....
T Consensus 130 ~~~fDliFIDadK~~yp~~le~~~~lLr~G-Gliv~DNvl~ 169 (219)
T COG4122 130 DGSFDLVFIDADKADYPEYLERALPLLRPG-GLIVADNVLF 169 (219)
T ss_pred CCCccEEEEeCChhhCHHHHHHHHHHhCCC-cEEEEeeccc
Confidence 56899997 443 2457899999999996 8877655443
No 186
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=96.98 E-value=0.037 Score=46.29 Aligned_cols=115 Identities=19% Similarity=0.105 Sum_probs=68.9
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChh-hHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529 169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK-RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 247 (354)
Q Consensus 169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~ 247 (354)
.|.+|||+|+|.+|..-+..+...|+ .|++++.+.. ..+.+.+.|- ..+...+... + .+ .++++||-++
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~-i~~~~~~~~~---~---dl--~~~~lVi~at 77 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGG-ITWLARCFDA---D---IL--EGAFLVIAAT 77 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCC-EEEEeCCCCH---H---Hh--CCcEEEEECC
Confidence 46799999999999999999999999 8888865432 2223333342 1121222211 1 11 3689999999
Q ss_pred cChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhc-cccEEEEE
Q 018529 248 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGT 295 (354)
Q Consensus 248 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~ 295 (354)
+.++.-.......+.. |..|..........+.++.. +. ..+++.-+
T Consensus 78 ~d~~ln~~i~~~a~~~-~ilvn~~d~~e~~~f~~pa~-~~~g~l~iais 124 (205)
T TIGR01470 78 DDEELNRRVAHAARAR-GVPVNVVDDPELCSFIFPSI-VDRSPVVVAIS 124 (205)
T ss_pred CCHHHHHHHHHHHHHc-CCEEEECCCcccCeEEEeeE-EEcCCEEEEEE
Confidence 9865655666666665 77776654433333333222 32 34555433
No 187
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=96.93 E-value=0.0098 Score=51.37 Aligned_cols=80 Identities=25% Similarity=0.377 Sum_probs=55.6
Q ss_pred CCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-----cCCce-E--EcCCCCChhHHHHHH-HHc
Q 018529 167 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVTD-F--VNTSEHDRPIQEVIA-EMT 236 (354)
Q Consensus 167 ~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-----lg~~~-v--~~~~~~~~~~~~~i~-~~~ 236 (354)
...+.++||+|| +++|...+..+-..|. +++.+.|+++|++.+.+ .|... + +|..+.+ -.+.+. ++.
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~--~~~~l~~~l~ 79 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPE--ALERLEDELK 79 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChh--HHHHHHHHHH
Confidence 356789999998 9999998888888899 99999999999887643 33322 2 2333332 222332 222
Q ss_pred C-C-CccEEEEcccC
Q 018529 237 N-G-GVDRSVECTGN 249 (354)
Q Consensus 237 ~-~-~~dvv~d~~g~ 249 (354)
. + .+|+.++++|-
T Consensus 80 ~~~~~IdvLVNNAG~ 94 (265)
T COG0300 80 ERGGPIDVLVNNAGF 94 (265)
T ss_pred hcCCcccEEEECCCc
Confidence 2 2 79999999884
No 188
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=96.92 E-value=0.0031 Score=51.05 Aligned_cols=101 Identities=22% Similarity=0.223 Sum_probs=63.8
Q ss_pred CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEc-CCCC--------------ChhHHHHHHH
Q 018529 170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN-TSEH--------------DRPIQEVIAE 234 (354)
Q Consensus 170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~-~~~~--------------~~~~~~~i~~ 234 (354)
.-+|+|+|+|.+|..|+.+++.+|+ +|+..+...++.+..+.++...+.. +.+. .......+.+
T Consensus 20 p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 98 (168)
T PF01262_consen 20 PAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE 98 (168)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred CeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence 3789999999999999999999999 8999999999998888887754433 1111 0011122222
Q ss_pred HcCCCccEEEEccc-----ChH-hHHHHHHHhhCCCceEEEEcCC
Q 018529 235 MTNGGVDRSVECTG-----NID-NMISAFECVHDGWGVAVLVGVP 273 (354)
Q Consensus 235 ~~~~~~dvv~d~~g-----~~~-~~~~~~~~l~~~~g~~v~~g~~ 273 (354)
... .+|+++.+.- .|. ..+..++.|+++ ..++.+...
T Consensus 99 ~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~g-svIvDis~D 141 (168)
T PF01262_consen 99 FIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPG-SVIVDISCD 141 (168)
T ss_dssp HHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTT-EEEEETTGG
T ss_pred HHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCC-ceEEEEEec
Confidence 211 3688886431 111 345677778885 667766543
No 189
>PRK04148 hypothetical protein; Provisional
Probab=96.92 E-value=0.0066 Score=46.59 Aligned_cols=93 Identities=18% Similarity=0.178 Sum_probs=65.7
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCC-CChhHHHHHHHHcCCCccEEEEc
Q 018529 168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE-HDRPIQEVIAEMTNGGVDRSVEC 246 (354)
Q Consensus 168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~-~~~~~~~~i~~~~~~~~dvv~d~ 246 (354)
.++.+++++|+| .|...+..+...|. .|+++|.+++..+.+++.+...+.+.-- .+.++ .+++|+++..
T Consensus 15 ~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~~~--------y~~a~liysi 84 (134)
T PRK04148 15 GKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLFNPNLEI--------YKNAKLIYSI 84 (134)
T ss_pred ccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCCCCCHHH--------HhcCCEEEEe
Confidence 456789999999 88755555557898 9999999999999999988765543222 12111 1369999998
Q ss_pred ccChHhHHHHHHHhhCCCceEEEE
Q 018529 247 TGNIDNMISAFECVHDGWGVAVLV 270 (354)
Q Consensus 247 ~g~~~~~~~~~~~l~~~~g~~v~~ 270 (354)
=..+++...+.+..+.-+.-+++.
T Consensus 85 rpp~el~~~~~~la~~~~~~~~i~ 108 (134)
T PRK04148 85 RPPRDLQPFILELAKKINVPLIIK 108 (134)
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEE
Confidence 888788887777776642334433
No 190
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=96.91 E-value=0.0052 Score=53.39 Aligned_cols=98 Identities=20% Similarity=0.147 Sum_probs=71.5
Q ss_pred CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccC
Q 018529 170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN 249 (354)
Q Consensus 170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~ 249 (354)
..+|.|+|+|.+|.-++.+|..+|+ .|+..+.|.+|++.+..+...++....+....+.+.++ +.|++|.++=.
T Consensus 168 ~~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~-----~aDlvIgaVLI 241 (371)
T COG0686 168 PAKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVK-----KADLVIGAVLI 241 (371)
T ss_pred CccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhh-----hccEEEEEEEe
Confidence 3467778999999999999999999 99999999999999987554444333332222444433 47999886422
Q ss_pred -----hH-hHHHHHHHhhCCCceEEEEcCCC
Q 018529 250 -----ID-NMISAFECVHDGWGVAVLVGVPS 274 (354)
Q Consensus 250 -----~~-~~~~~~~~l~~~~g~~v~~g~~~ 274 (354)
|. ..+..++.|+++ +.++.+....
T Consensus 242 pgakaPkLvt~e~vk~MkpG-sVivDVAiDq 271 (371)
T COG0686 242 PGAKAPKLVTREMVKQMKPG-SVIVDVAIDQ 271 (371)
T ss_pred cCCCCceehhHHHHHhcCCC-cEEEEEEEcC
Confidence 11 466789999997 9998887654
No 191
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.90 E-value=0.01 Score=51.01 Aligned_cols=77 Identities=26% Similarity=0.470 Sum_probs=52.4
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcCCceE-EcCCCCChhHHHHHHHHcCCCccEEEE
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVE 245 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~lg~~~v-~~~~~~~~~~~~~i~~~~~~~~dvv~d 245 (354)
++.+++|+|+ |.+|...++.+...|+ +|+.++++.++.+.+. +++...+ .|..+. ..+.+.+.. .+++|++|+
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~--~~~~d~vi~ 83 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVGDD-AAIRAALAA--AGAFDGLVN 83 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCCCH-HHHHHHHHH--hCCCCEEEE
Confidence 4679999997 9999999999999999 8999989887765553 3454322 233321 112222222 237899999
Q ss_pred cccC
Q 018529 246 CTGN 249 (354)
Q Consensus 246 ~~g~ 249 (354)
++|.
T Consensus 84 ~ag~ 87 (245)
T PRK07060 84 CAGI 87 (245)
T ss_pred CCCC
Confidence 9874
No 192
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.87 E-value=0.0059 Score=55.30 Aligned_cols=79 Identities=23% Similarity=0.413 Sum_probs=53.5
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCceE---EcCCCCC--hhHHHHHHHHcCC
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF---VNTSEHD--RPIQEVIAEMTNG 238 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~v---~~~~~~~--~~~~~~i~~~~~~ 238 (354)
+++++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+ ++.|.... .|..+.+ ..+.+.+.+. .+
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g 83 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASF-GG 83 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHh-cC
Confidence 4689999997 9999999999999999 899999998876543 33555432 2333321 1122222222 24
Q ss_pred CccEEEEcccC
Q 018529 239 GVDRSVECTGN 249 (354)
Q Consensus 239 ~~dvv~d~~g~ 249 (354)
++|++|+++|.
T Consensus 84 ~iD~lVnnAG~ 94 (330)
T PRK06139 84 RIDVWVNNVGV 94 (330)
T ss_pred CCCEEEECCCc
Confidence 79999999874
No 193
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.87 E-value=0.0091 Score=50.76 Aligned_cols=77 Identities=9% Similarity=0.181 Sum_probs=51.9
Q ss_pred CeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceE--EcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529 171 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF--VNTSEHDRPIQEVIAEMTNGGVDRSVECT 247 (354)
Q Consensus 171 ~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v--~~~~~~~~~~~~~i~~~~~~~~dvv~d~~ 247 (354)
++++|+|+ |.+|...+..+...|+ +|+++++++++.+.+++++-... .|..+. ..+.+.++.+..+++|++|.++
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~~~~~~~id~vi~~a 79 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMNDP-ASLDQLLQRLQGQRFDLLFVNA 79 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCCH-HHHHHHHHHhhcCCCCEEEEcC
Confidence 46899987 9999998888888899 89999998877766655432222 232221 2233334444334799999987
Q ss_pred cC
Q 018529 248 GN 249 (354)
Q Consensus 248 g~ 249 (354)
|.
T Consensus 80 g~ 81 (225)
T PRK08177 80 GI 81 (225)
T ss_pred cc
Confidence 64
No 194
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.86 E-value=0.0078 Score=44.33 Aligned_cols=92 Identities=22% Similarity=0.271 Sum_probs=59.9
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529 169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 248 (354)
Q Consensus 169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g 248 (354)
.|.+|||+|+|.+|..-++.+...|+ +|++++... +..+ +.-... ..+ +.+ .+ .++++||.+++
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~-~~~----~~~---~l--~~~~lV~~at~ 69 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLI-RRE----FEE---DL--DGADLVFAATD 69 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEE-ESS-----GG---GC--TTESEEEE-SS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHH-hhh----HHH---HH--hhheEEEecCC
Confidence 57899999999999999999999999 888887665 2222 111111 111 210 01 26899999999
Q ss_pred ChHhHHHHHHHhhCCCceEEEEcCCCCCc
Q 018529 249 NIDNMISAFECVHDGWGVAVLVGVPSKDA 277 (354)
Q Consensus 249 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~ 277 (354)
.+..-+......+.. |.++.....+...
T Consensus 70 d~~~n~~i~~~a~~~-~i~vn~~D~p~~~ 97 (103)
T PF13241_consen 70 DPELNEAIYADARAR-GILVNVVDDPELC 97 (103)
T ss_dssp -HHHHHHHHHHHHHT-TSEEEETT-CCCC
T ss_pred CHHHHHHHHHHHhhC-CEEEEECCCcCCC
Confidence 876666777777776 8888887655333
No 195
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.86 E-value=0.025 Score=48.77 Aligned_cols=101 Identities=19% Similarity=0.225 Sum_probs=59.9
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChh-hHHH----HHhcCCce-E--EcCCCCChhHHHHHHHHcC--
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK-RFEE----AKKFGVTD-F--VNTSEHDRPIQEVIAEMTN-- 237 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~-~~~~----~~~lg~~~-v--~~~~~~~~~~~~~i~~~~~-- 237 (354)
+++++||+|+ |.+|...+..+...|. +|+++.++.+ +.+. ++..+... . .|..+. .++.+.+++...
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~ 82 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDE-ESVAALMDTAREEF 82 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCH-HHHHHHHHHHHHhC
Confidence 4678999997 9999999998888898 7888777643 3322 22233321 1 233322 123333333221
Q ss_pred CCccEEEEcccCh-------------------HhHHHHHHHhhCCCceEEEEcC
Q 018529 238 GGVDRSVECTGNI-------------------DNMISAFECVHDGWGVAVLVGV 272 (354)
Q Consensus 238 ~~~dvv~d~~g~~-------------------~~~~~~~~~l~~~~g~~v~~g~ 272 (354)
+++|+++.++|.. ..++.+.+.+... |++++++.
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~-~~iv~isS 135 (248)
T PRK07806 83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAG-SRVVFVTS 135 (248)
T ss_pred CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCC-ceEEEEeC
Confidence 3689999887642 1334444445555 78888865
No 196
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.86 E-value=0.014 Score=47.15 Aligned_cols=97 Identities=20% Similarity=0.196 Sum_probs=62.8
Q ss_pred hhcccchhhhhhhhhhhcCCCCCCeEEEEcCCh-hHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCCh
Q 018529 148 CILSCGVSTGLGATLNVAKPERGSSVAVFGLGA-VGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 226 (354)
Q Consensus 148 a~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~g~-~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~ 226 (354)
...||...++...+.+...--.+.+|+|+|+|. +|..++..++..|+ +|+++.++.+
T Consensus 22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~~--------------------- 79 (168)
T cd01080 22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKTK--------------------- 79 (168)
T ss_pred CccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCch---------------------
Confidence 444544444444333333346789999999986 59989999999999 7888866521
Q ss_pred hHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCC
Q 018529 227 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 274 (354)
Q Consensus 227 ~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~ 274 (354)
++.+.++ .+|+||.+++.+..+.. ..++++ -.++.++.+.
T Consensus 80 ~l~~~l~-----~aDiVIsat~~~~ii~~--~~~~~~-~viIDla~pr 119 (168)
T cd01080 80 NLKEHTK-----QADIVIVAVGKPGLVKG--DMVKPG-AVVIDVGINR 119 (168)
T ss_pred hHHHHHh-----hCCEEEEcCCCCceecH--HHccCC-eEEEEccCCC
Confidence 1333232 37999999998654333 346664 6666676654
No 197
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.85 E-value=0.018 Score=54.67 Aligned_cols=79 Identities=24% Similarity=0.358 Sum_probs=50.4
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCCh--hhH-HHHHhcCCce-EEcCCCCChhHHHHHHHHc--CCCcc
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS--KRF-EEAKKFGVTD-FVNTSEHDRPIQEVIAEMT--NGGVD 241 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~--~~~-~~~~~lg~~~-v~~~~~~~~~~~~~i~~~~--~~~~d 241 (354)
+++++||+|+ |++|...++.+...|+ +|+++++.+ ++. +...+++... ..|..+.+ ...+.+.... .+++|
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~-~~~~~~~~~~~~~g~id 286 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITAPD-APARIAEHLAERHGGLD 286 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHH-HHHHHHHHHHHhCCCCC
Confidence 5789999987 9999999999999999 788887643 222 2334455432 23444322 1222222222 13689
Q ss_pred EEEEcccC
Q 018529 242 RSVECTGN 249 (354)
Q Consensus 242 vv~d~~g~ 249 (354)
++|+++|.
T Consensus 287 ~vi~~AG~ 294 (450)
T PRK08261 287 IVVHNAGI 294 (450)
T ss_pred EEEECCCc
Confidence 99999883
No 198
>PRK08628 short chain dehydrogenase; Provisional
Probab=96.81 E-value=0.022 Score=49.46 Aligned_cols=79 Identities=22% Similarity=0.244 Sum_probs=50.6
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh---cCCce-E--EcCCCCChhHHHHHHHHc--CCC
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK---FGVTD-F--VNTSEHDRPIQEVIAEMT--NGG 239 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~---lg~~~-v--~~~~~~~~~~~~~i~~~~--~~~ 239 (354)
++.++||+|+ |.+|...++.+...|+ +|+.+++++++.+..++ .+... . .|..+. ..+.+.+.+.. .++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~ 83 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDD-AQCRDAVEQTVAKFGR 83 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCH-HHHHHHHHHHHHhcCC
Confidence 4678999987 9999998888888899 78888888776644433 33321 1 222221 12333333322 147
Q ss_pred ccEEEEcccC
Q 018529 240 VDRSVECTGN 249 (354)
Q Consensus 240 ~dvv~d~~g~ 249 (354)
+|+++.++|.
T Consensus 84 id~vi~~ag~ 93 (258)
T PRK08628 84 IDGLVNNAGV 93 (258)
T ss_pred CCEEEECCcc
Confidence 8999999883
No 199
>PRK08265 short chain dehydrogenase; Provisional
Probab=96.81 E-value=0.022 Score=49.67 Aligned_cols=79 Identities=25% Similarity=0.310 Sum_probs=51.9
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCce-E--EcCCCCChhHHHHHHHHc--CCCcc
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD-F--VNTSEHDRPIQEVIAEMT--NGGVD 241 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~~~d 241 (354)
.++++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+ ++++... . .|..+.+ ++.+.+.+.. .+.+|
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~g~id 82 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITDDA-AIERAVATVVARFGRVD 82 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHH-HHHHHHHHHHHHhCCCC
Confidence 4679999987 9999999998888999 899999988765544 4444321 1 2333321 2333333221 13689
Q ss_pred EEEEcccC
Q 018529 242 RSVECTGN 249 (354)
Q Consensus 242 vv~d~~g~ 249 (354)
+++.++|.
T Consensus 83 ~lv~~ag~ 90 (261)
T PRK08265 83 ILVNLACT 90 (261)
T ss_pred EEEECCCC
Confidence 99998874
No 200
>PLN02366 spermidine synthase
Probab=96.78 E-value=0.018 Score=51.40 Aligned_cols=101 Identities=19% Similarity=0.095 Sum_probs=67.2
Q ss_pred CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCC--------ceEEcCCCCChhHHHHHHHHcCC
Q 018529 167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--------TDFVNTSEHDRPIQEVIAEMTNG 238 (354)
Q Consensus 167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~--------~~v~~~~~~~~~~~~~i~~~~~~ 238 (354)
....++|||+|+|. |.++..+++.-+..+|++++.+++-.+.++++-. .++-.. .. +..+.+++..++
T Consensus 89 ~~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi-~~--Da~~~l~~~~~~ 164 (308)
T PLN02366 89 IPNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLH-IG--DGVEFLKNAPEG 164 (308)
T ss_pred CCCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEE-EC--hHHHHHhhccCC
Confidence 35578999999876 6667788888766689999999988888877321 111111 11 244445544344
Q ss_pred CccEEEEcccC----------hHhHHHHHHHhhCCCceEEEEcC
Q 018529 239 GVDRSVECTGN----------IDNMISAFECVHDGWGVAVLVGV 272 (354)
Q Consensus 239 ~~dvv~d~~g~----------~~~~~~~~~~l~~~~g~~v~~g~ 272 (354)
.+|+||.-... .+.++.+.++|+++ |.++..+.
T Consensus 165 ~yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pg-Gvlv~q~~ 207 (308)
T PLN02366 165 TYDAIIVDSSDPVGPAQELFEKPFFESVARALRPG-GVVCTQAE 207 (308)
T ss_pred CCCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEECcC
Confidence 79999853221 25688899999998 99876543
No 201
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.78 E-value=0.054 Score=45.23 Aligned_cols=93 Identities=13% Similarity=0.043 Sum_probs=56.0
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChh-h-HHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529 169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK-R-FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 246 (354)
Q Consensus 169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~-~-~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~ 246 (354)
.|.+|||+|+|.+|...+..+...|+ .|++++.... . .+++.+ +.- .+...... +. .+ .++|+||-+
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~-~~i-~~~~~~~~----~~--~l--~~adlViaa 77 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEE-GKI-RWKQKEFE----PS--DI--VDAFLVIAA 77 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhC-CCE-EEEecCCC----hh--hc--CCceEEEEc
Confidence 46899999999999999988888998 8888865421 1 222222 211 11111111 00 01 268999999
Q ss_pred ccChHhHHHHHHHhhCCCceEEEEcCCC
Q 018529 247 TGNIDNMISAFECVHDGWGVAVLVGVPS 274 (354)
Q Consensus 247 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~ 274 (354)
++.+ .++..+...+.. +.++......
T Consensus 78 T~d~-elN~~i~~~a~~-~~lvn~~d~~ 103 (202)
T PRK06718 78 TNDP-RVNEQVKEDLPE-NALFNVITDA 103 (202)
T ss_pred CCCH-HHHHHHHHHHHh-CCcEEECCCC
Confidence 9985 445444444454 6666665544
No 202
>PRK06953 short chain dehydrogenase; Provisional
Probab=96.77 E-value=0.013 Score=49.75 Aligned_cols=77 Identities=16% Similarity=0.302 Sum_probs=52.8
Q ss_pred CeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCce-EEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529 171 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 248 (354)
Q Consensus 171 ~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g 248 (354)
++++|+|+ |.+|...++.+...|+ +|+.++++.++.+.++..+... ..|..+.+ .+.+.+.++..+++|+++.+.|
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~~d~vi~~ag 79 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVADPA-SVAGLAWKLDGEALDAAVYVAG 79 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCCHH-HHHHHHHHhcCCCCCEEEECCC
Confidence 46899987 9999998887777898 8999999988877776666532 23333322 2333333333337999999876
Q ss_pred C
Q 018529 249 N 249 (354)
Q Consensus 249 ~ 249 (354)
.
T Consensus 80 ~ 80 (222)
T PRK06953 80 V 80 (222)
T ss_pred c
Confidence 5
No 203
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.76 E-value=0.011 Score=51.33 Aligned_cols=79 Identities=20% Similarity=0.292 Sum_probs=52.3
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCceE-EcCCCCChhHHHHHHHHc--CCCccEE
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDF-VNTSEHDRPIQEVIAEMT--NGGVDRS 243 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~~v-~~~~~~~~~~~~~i~~~~--~~~~dvv 243 (354)
+++++||+|+ |.+|...++.+...|+ +|+++++++++.+.+ .+++...+ .|..+.+ .+.+.+.+.. .+++|++
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~v 83 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTDED-AVNALFDTAAETYGSVDIA 83 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHH-HHHHHHHHHHHHcCCCCEE
Confidence 4789999997 9999999999999999 888888888766544 44544222 2333321 2222232221 1368999
Q ss_pred EEcccC
Q 018529 244 VECTGN 249 (354)
Q Consensus 244 ~d~~g~ 249 (354)
+.++|.
T Consensus 84 i~~ag~ 89 (255)
T PRK06057 84 FNNAGI 89 (255)
T ss_pred EECCCc
Confidence 998874
No 204
>PRK07402 precorrin-6B methylase; Provisional
Probab=96.75 E-value=0.033 Score=46.33 Aligned_cols=105 Identities=19% Similarity=0.322 Sum_probs=64.2
Q ss_pred hhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHcC
Q 018529 162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN 237 (354)
Q Consensus 162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~ 237 (354)
.....++++++||=+|+|. |..++.+++.....+|++++.+++..+.+++ ++...+.... .+ ..+.+..+.
T Consensus 33 ~~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~-~d--~~~~~~~~~- 107 (196)
T PRK07402 33 ISQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIE-GS--APECLAQLA- 107 (196)
T ss_pred HHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEE-Cc--hHHHHhhCC-
Confidence 4455778889888888753 5566666765533399999999988877654 5554322111 11 222222222
Q ss_pred CCccEE-EEcccC-hHhHHHHHHHhhCCCceEEEEcC
Q 018529 238 GGVDRS-VECTGN-IDNMISAFECVHDGWGVAVLVGV 272 (354)
Q Consensus 238 ~~~dvv-~d~~g~-~~~~~~~~~~l~~~~g~~v~~g~ 272 (354)
..+|.+ ++.... ...++.+.+.|+++ |+++....
T Consensus 108 ~~~d~v~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~ 143 (196)
T PRK07402 108 PAPDRVCIEGGRPIKEILQAVWQYLKPG-GRLVATAS 143 (196)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHhcCCC-eEEEEEee
Confidence 224544 443222 36788899999997 99887743
No 205
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=96.75 E-value=0.025 Score=48.16 Aligned_cols=108 Identities=19% Similarity=0.272 Sum_probs=76.5
Q ss_pred hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHc
Q 018529 161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT 236 (354)
Q Consensus 161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~ 236 (354)
+....+.++|++||=+|+| +|-.|..+++..|-..|+++|.+++-++.+++ .|... +.+...+ ++.+. +.
T Consensus 43 ~i~~~~~~~g~~vLDva~G-TGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~~d---Ae~LP-f~ 116 (238)
T COG2226 43 LISLLGIKPGDKVLDVACG-TGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVVGD---AENLP-FP 116 (238)
T ss_pred HHHhhCCCCCCEEEEecCC-ccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEEec---hhhCC-CC
Confidence 3455566799999998776 48999999999986699999999998888765 23222 1111111 11111 22
Q ss_pred CCCccEEEEcccC------hHhHHHHHHHhhCCCceEEEEcCCCC
Q 018529 237 NGGVDRSVECTGN------IDNMISAFECVHDGWGVAVLVGVPSK 275 (354)
Q Consensus 237 ~~~~dvv~d~~g~------~~~~~~~~~~l~~~~g~~v~~g~~~~ 275 (354)
...||+|..+.|- +..+.++.+.|+|+ |+++.+....+
T Consensus 117 D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpg-G~~~vle~~~p 160 (238)
T COG2226 117 DNSFDAVTISFGLRNVTDIDKALKEMYRVLKPG-GRLLVLEFSKP 160 (238)
T ss_pred CCccCEEEeeehhhcCCCHHHHHHHHHHhhcCC-eEEEEEEcCCC
Confidence 3379999887763 35788999999997 99999887654
No 206
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.75 E-value=0.014 Score=55.78 Aligned_cols=74 Identities=26% Similarity=0.240 Sum_probs=55.4
Q ss_pred CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEE
Q 018529 166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE 245 (354)
Q Consensus 166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d 245 (354)
.+.++++|+|+|.|..|++++.+++..|+ .|++.+..+++.+.++++|+.. +.... ..+.+ ..+|+|+.
T Consensus 8 ~~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~-~~~~~----~~~~l-----~~~D~VV~ 76 (488)
T PRK03369 8 PLLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVAT-VSTSD----AVQQI-----ADYALVVT 76 (488)
T ss_pred cccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEE-EcCcc----hHhHh-----hcCCEEEE
Confidence 35678999999999999999999999999 8999998777766677788743 22211 11112 14799999
Q ss_pred cccCh
Q 018529 246 CTGNI 250 (354)
Q Consensus 246 ~~g~~ 250 (354)
+.|.+
T Consensus 77 SpGi~ 81 (488)
T PRK03369 77 SPGFR 81 (488)
T ss_pred CCCCC
Confidence 98865
No 207
>PRK12939 short chain dehydrogenase; Provisional
Probab=96.72 E-value=0.025 Score=48.68 Aligned_cols=79 Identities=24% Similarity=0.257 Sum_probs=50.4
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCc-eE--EcCCCCChhHHHHHHHHc--CC
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVT-DF--VNTSEHDRPIQEVIAEMT--NG 238 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~-~v--~~~~~~~~~~~~~i~~~~--~~ 238 (354)
++.+++|+|+ |.+|...+..+...|+ +|+++++++++.+.+ ++.+.. .+ .|..+.+ .+.+.+.+.. .+
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~ 83 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPA-SVQRFFDAAAAALG 83 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHH-HHHHHHHHHHHHcC
Confidence 4688999987 9999999998888999 888888887765533 223332 12 2333221 1222222221 14
Q ss_pred CccEEEEcccC
Q 018529 239 GVDRSVECTGN 249 (354)
Q Consensus 239 ~~dvv~d~~g~ 249 (354)
++|+++.++|.
T Consensus 84 ~id~vi~~ag~ 94 (250)
T PRK12939 84 GLDGLVNNAGI 94 (250)
T ss_pred CCCEEEECCCC
Confidence 79999999875
No 208
>CHL00194 ycf39 Ycf39; Provisional
Probab=96.70 E-value=0.029 Score=50.49 Aligned_cols=95 Identities=16% Similarity=0.196 Sum_probs=61.0
Q ss_pred eEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEE-cCCCCChhHHHHHHHHcCCCccEEEEcccC
Q 018529 172 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV-NTSEHDRPIQEVIAEMTNGGVDRSVECTGN 249 (354)
Q Consensus 172 ~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~ 249 (354)
+|||+|+ |.+|...+..+...|. .|++++++.++...+...++..+. |..+. +.+.+.. .++|+||++++.
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~-----~~l~~al-~g~d~Vi~~~~~ 74 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVYGDLSLP-----ETLPPSF-KGVTAIIDASTS 74 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEECCCCCH-----HHHHHHH-CCCCEEEECCCC
Confidence 6899997 9999999998888898 899998887776666556664432 22221 1233322 258999998753
Q ss_pred hH------------hHHHHHHHhhCC-CceEEEEcCC
Q 018529 250 ID------------NMISAFECVHDG-WGVAVLVGVP 273 (354)
Q Consensus 250 ~~------------~~~~~~~~l~~~-~g~~v~~g~~ 273 (354)
.. ....+++.+... ..+++.++..
T Consensus 75 ~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~ 111 (317)
T CHL00194 75 RPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111 (317)
T ss_pred CCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 11 113344444443 1478887764
No 209
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=96.69 E-value=0.023 Score=49.83 Aligned_cols=100 Identities=17% Similarity=0.143 Sum_probs=68.6
Q ss_pred CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhc-CCceEEcCCCC----ChhHHHHHHHHcCCCcc
Q 018529 167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GVTDFVNTSEH----DRPIQEVIAEMTNGGVD 241 (354)
Q Consensus 167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~l-g~~~v~~~~~~----~~~~~~~i~~~~~~~~d 241 (354)
.++ ++|||+|+|. |-.+-.++++....++++++.+++=.++++++ +...--..+.. -.+-.+.+++... ++|
T Consensus 75 ~~p-k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~-~fD 151 (282)
T COG0421 75 PNP-KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEE-KFD 151 (282)
T ss_pred CCC-CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCC-cCC
Confidence 344 5999998764 55667888888888999999999999999884 22110001000 0124555666544 799
Q ss_pred EEE-EcccC---------hHhHHHHHHHhhCCCceEEEE
Q 018529 242 RSV-ECTGN---------IDNMISAFECVHDGWGVAVLV 270 (354)
Q Consensus 242 vv~-d~~g~---------~~~~~~~~~~l~~~~g~~v~~ 270 (354)
+|+ |++.. .+..+.+.++|+++ |.++..
T Consensus 152 vIi~D~tdp~gp~~~Lft~eFy~~~~~~L~~~-Gi~v~q 189 (282)
T COG0421 152 VIIVDSTDPVGPAEALFTEEFYEGCRRALKED-GIFVAQ 189 (282)
T ss_pred EEEEcCCCCCCcccccCCHHHHHHHHHhcCCC-cEEEEe
Confidence 986 55432 47889999999998 998877
No 210
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.69 E-value=0.012 Score=51.17 Aligned_cols=80 Identities=24% Similarity=0.345 Sum_probs=52.6
Q ss_pred CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCC-ceEE--cCCCCChhHHHHHHHHc--C
Q 018529 168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGV-TDFV--NTSEHDRPIQEVIAEMT--N 237 (354)
Q Consensus 168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~-~~v~--~~~~~~~~~~~~i~~~~--~ 237 (354)
..++++||+|+ |.+|...+..+...|+ +|+++.+++++.+.+.+ .+. ..++ |..+. .++.+.+++.. .
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~ 84 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDY-QSIKAAVAHAETEA 84 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCH-HHHHHHHHHHHHhc
Confidence 45789999987 9999999999998999 89999998887654432 122 1222 33221 22333333321 2
Q ss_pred CCccEEEEcccC
Q 018529 238 GGVDRSVECTGN 249 (354)
Q Consensus 238 ~~~dvv~d~~g~ 249 (354)
+++|+++++.|.
T Consensus 85 ~~~d~li~~ag~ 96 (258)
T PRK06949 85 GTIDILVNNSGV 96 (258)
T ss_pred CCCCEEEECCCC
Confidence 378999999883
No 211
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.68 E-value=0.017 Score=51.02 Aligned_cols=44 Identities=23% Similarity=0.240 Sum_probs=38.3
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH
Q 018529 168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK 211 (354)
Q Consensus 168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~ 211 (354)
..+.+|+|+|+|++|.+++..+...|+.+|+.++++.+|.+.+.
T Consensus 125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la 168 (284)
T PRK12549 125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALA 168 (284)
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence 35678999999999999999999999989999999988877553
No 212
>PRK00811 spermidine synthase; Provisional
Probab=96.67 E-value=0.014 Score=51.59 Aligned_cols=98 Identities=16% Similarity=0.145 Sum_probs=65.4
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcC------C---ceEEcCCCCChhHHHHHHHHcCC
Q 018529 168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG------V---TDFVNTSEHDRPIQEVIAEMTNG 238 (354)
Q Consensus 168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg------~---~~v~~~~~~~~~~~~~i~~~~~~ 238 (354)
...++||++|+|. |..+..+++..+..+|++++.+++-.+.+++.- . .++- ....+ ..+.++. ..+
T Consensus 75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~-v~~~D--a~~~l~~-~~~ 149 (283)
T PRK00811 75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVE-LVIGD--GIKFVAE-TEN 149 (283)
T ss_pred CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceE-EEECc--hHHHHhh-CCC
Confidence 4567999999875 777777788767779999999999888887631 1 1111 11111 3344443 344
Q ss_pred CccEEEEccc----------ChHhHHHHHHHhhCCCceEEEEc
Q 018529 239 GVDRSVECTG----------NIDNMISAFECVHDGWGVAVLVG 271 (354)
Q Consensus 239 ~~dvv~d~~g----------~~~~~~~~~~~l~~~~g~~v~~g 271 (354)
.+|+|+.-.. ..+.++.+.+.|+++ |.++...
T Consensus 150 ~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~g-Gvlv~~~ 191 (283)
T PRK00811 150 SFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKED-GIFVAQS 191 (283)
T ss_pred cccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEEeC
Confidence 8999985321 134567888999997 9988653
No 213
>PRK07109 short chain dehydrogenase; Provisional
Probab=96.67 E-value=0.026 Score=51.19 Aligned_cols=79 Identities=19% Similarity=0.265 Sum_probs=52.2
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCceE---EcCCCCChhHHHHHHHHc--CC
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF---VNTSEHDRPIQEVIAEMT--NG 238 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~v---~~~~~~~~~~~~~i~~~~--~~ 238 (354)
.+.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++.|.... .|..+.+ ++.+.+.... -+
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~-~v~~~~~~~~~~~g 84 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAE-AVQAAADRAEEELG 84 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHH-HHHHHHHHHHHHCC
Confidence 4678999987 9999999999888999 888888988776543 33454322 2333321 2222222221 14
Q ss_pred CccEEEEcccC
Q 018529 239 GVDRSVECTGN 249 (354)
Q Consensus 239 ~~dvv~d~~g~ 249 (354)
++|++++++|.
T Consensus 85 ~iD~lInnAg~ 95 (334)
T PRK07109 85 PIDTWVNNAMV 95 (334)
T ss_pred CCCEEEECCCc
Confidence 79999999874
No 214
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=96.65 E-value=0.016 Score=50.57 Aligned_cols=79 Identities=27% Similarity=0.358 Sum_probs=60.1
Q ss_pred CCCCeEEEEcC-ChhHHH-HHHHHHHcCCcEEEEEcCChhhHHHHHh-----cCC---ceEEcCCCCChhHHHHHHHHcC
Q 018529 168 ERGSSVAVFGL-GAVGLA-AAEGARIAGASRIIGVDRSSKRFEEAKK-----FGV---TDFVNTSEHDRPIQEVIAEMTN 237 (354)
Q Consensus 168 ~~~~~vlI~G~-g~~G~~-a~~~a~~~g~~~vi~v~~~~~~~~~~~~-----lg~---~~v~~~~~~~~~~~~~i~~~~~ 237 (354)
+-|++.+|+|+ .++|.+ |-++|+ .|. +|+.+.|+++|++..++ .++ ..++|+.+.+. ..+.+++...
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~-~ye~i~~~l~ 123 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAK-RGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDE-VYEKLLEKLA 123 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCch-hHHHHHHHhc
Confidence 45789999998 899977 777777 899 79999999999887643 453 23577777764 4556666666
Q ss_pred C-CccEEEEcccC
Q 018529 238 G-GVDRSVECTGN 249 (354)
Q Consensus 238 ~-~~dvv~d~~g~ 249 (354)
+ .+-+.++++|.
T Consensus 124 ~~~VgILVNNvG~ 136 (312)
T KOG1014|consen 124 GLDVGILVNNVGM 136 (312)
T ss_pred CCceEEEEecccc
Confidence 6 77888999884
No 215
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=96.64 E-value=0.0096 Score=56.66 Aligned_cols=79 Identities=27% Similarity=0.356 Sum_probs=55.9
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh---------------------hhHHHHHhcCCceEEcCCCCCh
Q 018529 168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS---------------------KRFEEAKKFGVTDFVNTSEHDR 226 (354)
Q Consensus 168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~---------------------~~~~~~~~lg~~~v~~~~~~~~ 226 (354)
..+++|+|+|+|+.|+.++..+...|. .|+.++..+ ...++++++|++..++..-..
T Consensus 139 ~~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~- 216 (467)
T TIGR01318 139 PTGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGR- 216 (467)
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCC-
Confidence 368899999999999999999999999 788887653 245677889987655442211
Q ss_pred hHHHHHHHHcCCCccEEEEcccChH
Q 018529 227 PIQEVIAEMTNGGVDRSVECTGNID 251 (354)
Q Consensus 227 ~~~~~i~~~~~~~~dvv~d~~g~~~ 251 (354)
++ .+..+. .++|.||.++|...
T Consensus 217 ~~--~~~~~~-~~~D~vilAtGa~~ 238 (467)
T TIGR01318 217 DI--SLDDLL-EDYDAVFLGVGTYR 238 (467)
T ss_pred cc--CHHHHH-hcCCEEEEEeCCCC
Confidence 11 111221 25999999999743
No 216
>PLN03075 nicotianamine synthase; Provisional
Probab=96.63 E-value=0.014 Score=51.27 Aligned_cols=99 Identities=13% Similarity=0.095 Sum_probs=66.8
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHHhcC-----CceEEcCCCCChhHHHHHHHHcCCCcc
Q 018529 168 ERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKFG-----VTDFVNTSEHDRPIQEVIAEMTNGGVD 241 (354)
Q Consensus 168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~~lg-----~~~v~~~~~~~~~~~~~i~~~~~~~~d 241 (354)
.+.++|+-+|+|+.++.++.++..+.. .+++++|.+++..++++++- ...-+.+...+ ..+.... .++||
T Consensus 122 ~~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~D--a~~~~~~--l~~FD 197 (296)
T PLN03075 122 GVPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTAD--VMDVTES--LKEYD 197 (296)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECc--hhhcccc--cCCcC
Confidence 377999999999999998888875532 38999999999988887633 22212222222 2221101 24799
Q ss_pred EEEEcc-------cChHhHHHHHHHhhCCCceEEEEc
Q 018529 242 RSVECT-------GNIDNMISAFECVHDGWGVAVLVG 271 (354)
Q Consensus 242 vv~d~~-------g~~~~~~~~~~~l~~~~g~~v~~g 271 (354)
+||..+ .....++.+.+.|+++ |.+++-.
T Consensus 198 lVF~~ALi~~dk~~k~~vL~~l~~~LkPG-G~Lvlr~ 233 (296)
T PLN03075 198 VVFLAALVGMDKEEKVKVIEHLGKHMAPG-ALLMLRS 233 (296)
T ss_pred EEEEecccccccccHHHHHHHHHHhcCCC-cEEEEec
Confidence 999765 2235678899999997 8876553
No 217
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.62 E-value=0.018 Score=50.19 Aligned_cols=81 Identities=26% Similarity=0.356 Sum_probs=52.4
Q ss_pred CCCCCeEEEEcC-C-hhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-----cCCceE--E--cCCCCChhHHHHHHHH
Q 018529 167 PERGSSVAVFGL-G-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVTDF--V--NTSEHDRPIQEVIAEM 235 (354)
Q Consensus 167 ~~~~~~vlI~G~-g-~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-----lg~~~v--~--~~~~~~~~~~~~i~~~ 235 (354)
+.+++++||+|+ | ++|.+.++.+...|+ +|+++++++++.+...+ ++...+ + |..+.+ .+.+.+.+.
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~ 91 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEA-QVDALIDAA 91 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHH-HHHHHHHHH
Confidence 445789999986 6 799999999999999 78888888776554322 443222 2 332221 222223222
Q ss_pred c--CCCccEEEEcccC
Q 018529 236 T--NGGVDRSVECTGN 249 (354)
Q Consensus 236 ~--~~~~dvv~d~~g~ 249 (354)
. .+++|++++++|.
T Consensus 92 ~~~~g~id~li~~ag~ 107 (262)
T PRK07831 92 VERLGRLDVLVNNAGL 107 (262)
T ss_pred HHHcCCCCEEEECCCC
Confidence 1 1478999999984
No 218
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.62 E-value=0.012 Score=51.25 Aligned_cols=82 Identities=27% Similarity=0.310 Sum_probs=53.1
Q ss_pred CCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCc--eE--EcCCCCChhHHHHHHHHc--C
Q 018529 166 KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVT--DF--VNTSEHDRPIQEVIAEMT--N 237 (354)
Q Consensus 166 ~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~--~v--~~~~~~~~~~~~~i~~~~--~ 237 (354)
..-++.++||+|+ |.+|...+..+...|+ +|+.+.++++..+.+.+ ..-. .+ .|..+.. .+.+.+.+.. .
T Consensus 7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~ 84 (264)
T PRK12829 7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVADPA-QVERVFDTAVERF 84 (264)
T ss_pred hccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHH-HHHHHHHHHHHHh
Confidence 3457789999987 9999999999999999 79999888776655433 2211 12 2322221 1222222221 1
Q ss_pred CCccEEEEcccC
Q 018529 238 GGVDRSVECTGN 249 (354)
Q Consensus 238 ~~~dvv~d~~g~ 249 (354)
+++|+|+.++|.
T Consensus 85 ~~~d~vi~~ag~ 96 (264)
T PRK12829 85 GGLDVLVNNAGI 96 (264)
T ss_pred CCCCEEEECCCC
Confidence 379999998875
No 219
>PRK07576 short chain dehydrogenase; Provisional
Probab=96.62 E-value=0.054 Score=47.30 Aligned_cols=78 Identities=22% Similarity=0.305 Sum_probs=50.5
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCc-eE--EcCCCCChhHHHHHHHHc--CC
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVT-DF--VNTSEHDRPIQEVIAEMT--NG 238 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~-~v--~~~~~~~~~~~~~i~~~~--~~ 238 (354)
++.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+ .+.+.. .. .|..+. ..+.+.+++.. .+
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~i~~~~~~~~~~~~ 85 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDY-AAVEAAFAQIADEFG 85 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCH-HHHHHHHHHHHHHcC
Confidence 5789999987 9999999998888999 899998887665433 222322 12 233322 12333333332 13
Q ss_pred CccEEEEccc
Q 018529 239 GVDRSVECTG 248 (354)
Q Consensus 239 ~~dvv~d~~g 248 (354)
++|+++.+.|
T Consensus 86 ~iD~vi~~ag 95 (264)
T PRK07576 86 PIDVLVSGAA 95 (264)
T ss_pred CCCEEEECCC
Confidence 6899998876
No 220
>PRK08267 short chain dehydrogenase; Provisional
Probab=96.61 E-value=0.051 Score=47.21 Aligned_cols=77 Identities=17% Similarity=0.211 Sum_probs=51.7
Q ss_pred CeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cC-Cc-e--EEcCCCCChhHHHHHHHHc---CCCcc
Q 018529 171 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FG-VT-D--FVNTSEHDRPIQEVIAEMT---NGGVD 241 (354)
Q Consensus 171 ~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg-~~-~--v~~~~~~~~~~~~~i~~~~---~~~~d 241 (354)
+++||+|+ |.+|...++.+...|+ +|++++++.++.+.+.+ ++ .. . ..|..+.+ ++.+.+.... .+++|
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~~~~id 79 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTDRA-AWDAALADFAAATGGRLD 79 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHH-HHHHHHHHHHHHcCCCCC
Confidence 47899987 9999999998888899 89999898887665533 32 11 1 23433322 2333333321 34799
Q ss_pred EEEEcccC
Q 018529 242 RSVECTGN 249 (354)
Q Consensus 242 vv~d~~g~ 249 (354)
+++.++|.
T Consensus 80 ~vi~~ag~ 87 (260)
T PRK08267 80 VLFNNAGI 87 (260)
T ss_pred EEEECCCC
Confidence 99999875
No 221
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=96.61 E-value=0.014 Score=53.68 Aligned_cols=97 Identities=25% Similarity=0.254 Sum_probs=66.9
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHH-HHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529 168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 246 (354)
Q Consensus 168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~ 246 (354)
-.+.++||+|+|-+|.+++..+...|...|+...|+.+|.+ +++++|+. ++.+++ ..+.+. .+|+||.+
T Consensus 176 L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~-~~~l~e----l~~~l~-----~~DvViss 245 (414)
T COG0373 176 LKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAE-AVALEE----LLEALA-----EADVVISS 245 (414)
T ss_pred cccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCe-eecHHH----HHHhhh-----hCCEEEEe
Confidence 47889999999999999999999999889999999998866 56778853 332222 222221 48999999
Q ss_pred ccChHh---HHHHHHHhhCCCc-eEEEEcCCC
Q 018529 247 TGNIDN---MISAFECVHDGWG-VAVLVGVPS 274 (354)
Q Consensus 247 ~g~~~~---~~~~~~~l~~~~g-~~v~~g~~~ 274 (354)
++.+.. -......++.... -++.++.+.
T Consensus 246 Tsa~~~ii~~~~ve~a~~~r~~~livDiavPR 277 (414)
T COG0373 246 TSAPHPIITREMVERALKIRKRLLIVDIAVPR 277 (414)
T ss_pred cCCCccccCHHHHHHHHhcccCeEEEEecCCC
Confidence 987643 2344455555412 245555543
No 222
>PLN02780 ketoreductase/ oxidoreductase
Probab=96.60 E-value=0.016 Score=52.30 Aligned_cols=80 Identities=20% Similarity=0.209 Sum_probs=53.1
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-----cC-Cc---eEEcCCCCChhHHHHHHHHcCC
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FG-VT---DFVNTSEHDRPIQEVIAEMTNG 238 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-----lg-~~---~v~~~~~~~~~~~~~i~~~~~~ 238 (354)
.|.+++|+|+ |++|.+.+..+...|+ +|+.+++++++.+.+.+ .+ .. ...|..++..+..+.+.+...+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~ 130 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG 130 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence 5889999997 9999988877777899 89999999988765422 22 11 1234443222344445544444
Q ss_pred -CccEEEEcccC
Q 018529 239 -GVDRSVECTGN 249 (354)
Q Consensus 239 -~~dvv~d~~g~ 249 (354)
.+|++++++|.
T Consensus 131 ~didilVnnAG~ 142 (320)
T PLN02780 131 LDVGVLINNVGV 142 (320)
T ss_pred CCccEEEEecCc
Confidence 57799998763
No 223
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.60 E-value=0.025 Score=47.32 Aligned_cols=35 Identities=34% Similarity=0.358 Sum_probs=31.4
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529 169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 203 (354)
Q Consensus 169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~ 203 (354)
...+|+|+|+|++|...++.+...|.++++.+|.+
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 35789999999999999999999999899999876
No 224
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.60 E-value=0.058 Score=43.04 Aligned_cols=89 Identities=15% Similarity=0.075 Sum_probs=54.9
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529 169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 248 (354)
Q Consensus 169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g 248 (354)
.|.+|+|+|+|.+|.--++.+...|+ .|++++ ++..+.+.+++.-. +.... +.+ ..-.++|+|+-+++
T Consensus 12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~-~~~~~----~~~----~dl~~a~lViaaT~ 79 (157)
T PRK06719 12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYIT-WKQKT----FSN----DDIKDAHLIYAATN 79 (157)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcE-EEecc----cCh----hcCCCceEEEECCC
Confidence 57899999999999998888888899 888773 44434444454211 11111 111 01136899999998
Q ss_pred ChHhHHHHHHHhhCCCceEEEEc
Q 018529 249 NIDNMISAFECVHDGWGVAVLVG 271 (354)
Q Consensus 249 ~~~~~~~~~~~l~~~~g~~v~~g 271 (354)
. +..+..+...+.. +.++...
T Consensus 80 d-~e~N~~i~~~a~~-~~~vn~~ 100 (157)
T PRK06719 80 Q-HAVNMMVKQAAHD-FQWVNVV 100 (157)
T ss_pred C-HHHHHHHHHHHHH-CCcEEEC
Confidence 8 4455555555444 4444443
No 225
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=96.60 E-value=0.0098 Score=52.51 Aligned_cols=96 Identities=23% Similarity=0.307 Sum_probs=60.2
Q ss_pred CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCc-eEEcCCCCChhHHHHHHHHcCCCcc
Q 018529 167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHDRPIQEVIAEMTNGGVD 241 (354)
Q Consensus 167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~-~v~~~~~~~~~~~~~i~~~~~~~~d 241 (354)
.++|++||=+|+|. |.+++..++ +|+++|++++.++...+.+++ -|.. .+......+ ...+.||
T Consensus 159 ~~~g~~vLDvG~GS-GILaiaA~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~~---------~~~~~~d 227 (295)
T PF06325_consen 159 VKPGKRVLDVGCGS-GILAIAAAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSED---------LVEGKFD 227 (295)
T ss_dssp SSTTSEEEEES-TT-SHHHHHHHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTSC---------TCCS-EE
T ss_pred ccCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEecc---------cccccCC
Confidence 67889999999863 666666555 598899999999987777654 2322 221111111 1125799
Q ss_pred EEEEcccChH---hHHHHHHHhhCCCceEEEEcCCC
Q 018529 242 RSVECTGNID---NMISAFECVHDGWGVAVLVGVPS 274 (354)
Q Consensus 242 vv~d~~g~~~---~~~~~~~~l~~~~g~~v~~g~~~ 274 (354)
+|+-..-... ......+.++++ |.+++.|...
T Consensus 228 lvvANI~~~vL~~l~~~~~~~l~~~-G~lIlSGIl~ 262 (295)
T PF06325_consen 228 LVVANILADVLLELAPDIASLLKPG-GYLILSGILE 262 (295)
T ss_dssp EEEEES-HHHHHHHHHHCHHHEEEE-EEEEEEEEEG
T ss_pred EEEECCCHHHHHHHHHHHHHhhCCC-CEEEEccccH
Confidence 9996654422 333455678887 9999888765
No 226
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.60 E-value=0.014 Score=50.92 Aligned_cols=78 Identities=23% Similarity=0.279 Sum_probs=51.7
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhc-CCce-E--EcCCCCChhHHHHHHHHcC--CCcc
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GVTD-F--VNTSEHDRPIQEVIAEMTN--GGVD 241 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~l-g~~~-v--~~~~~~~~~~~~~i~~~~~--~~~d 241 (354)
++++++|+|+ |++|...++.+...|+ +|+++++++++.+.+.+. +... . .|..+. ....+.+++... +.+|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~id 81 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSL-DDHKEAVARCVAAFGKID 81 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCCH-HHHHHHHHHHHHHhCCCC
Confidence 4789999987 9999999988888999 899998988776665543 3211 1 233222 123333333221 4689
Q ss_pred EEEEccc
Q 018529 242 RSVECTG 248 (354)
Q Consensus 242 vv~d~~g 248 (354)
++++++|
T Consensus 82 ~li~~Ag 88 (262)
T TIGR03325 82 CLIPNAG 88 (262)
T ss_pred EEEECCC
Confidence 9999886
No 227
>PRK07814 short chain dehydrogenase; Provisional
Probab=96.58 E-value=0.014 Score=50.97 Aligned_cols=79 Identities=19% Similarity=0.260 Sum_probs=51.1
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCc-eE--EcCCCCChhHHHHHHHHc--CC
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DF--VNTSEHDRPIQEVIAEMT--NG 238 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~-~v--~~~~~~~~~~~~~i~~~~--~~ 238 (354)
++.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+.+ .+.. .+ .|..+.+ .+.+.+.+.. -+
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~ 86 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPE-ATAGLAGQAVEAFG 86 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHH-HHHHHHHHHHHHcC
Confidence 5789999987 8999999998888999 89999998876554322 2322 12 2333221 1222222221 14
Q ss_pred CccEEEEcccC
Q 018529 239 GVDRSVECTGN 249 (354)
Q Consensus 239 ~~dvv~d~~g~ 249 (354)
++|++|+++|.
T Consensus 87 ~id~vi~~Ag~ 97 (263)
T PRK07814 87 RLDIVVNNVGG 97 (263)
T ss_pred CCCEEEECCCC
Confidence 79999998873
No 228
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.57 E-value=0.016 Score=50.61 Aligned_cols=79 Identities=23% Similarity=0.311 Sum_probs=52.4
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCc-eEE--cCCCCChhHHHHHHHHc--CCCcc
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVT-DFV--NTSEHDRPIQEVIAEMT--NGGVD 241 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~-~v~--~~~~~~~~~~~~i~~~~--~~~~d 241 (354)
+++++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.+ ++.. ..+ |..+. ..+.+.+.+.. .+.+|
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~id 82 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTSY-ADNQRAVDQTVDAFGKLD 82 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCH-HHHHHHHHHHHHhcCCCC
Confidence 4689999987 9999999988888999 89999998887766543 4321 122 22221 12333333322 13689
Q ss_pred EEEEcccC
Q 018529 242 RSVECTGN 249 (354)
Q Consensus 242 vv~d~~g~ 249 (354)
++++++|.
T Consensus 83 ~li~~ag~ 90 (263)
T PRK06200 83 CFVGNAGI 90 (263)
T ss_pred EEEECCCC
Confidence 99998873
No 229
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=96.57 E-value=0.023 Score=48.65 Aligned_cols=105 Identities=15% Similarity=0.160 Sum_probs=69.5
Q ss_pred hhcCCCCCCeEEEEcCChhHHHHHHHHHHcC-CcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHc-
Q 018529 163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT- 236 (354)
Q Consensus 163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g-~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~- 236 (354)
...+..+.++||=+|+| +|+.++.+|..++ ..+|++++.+++..+.+++ .|...-+.....+ ..+.+.++.
T Consensus 62 ~l~~~~~~~~vLEiGt~-~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~gd--a~~~L~~l~~ 138 (234)
T PLN02781 62 MLVKIMNAKNTLEIGVF-TGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQSD--ALSALDQLLN 138 (234)
T ss_pred HHHHHhCCCEEEEecCc-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcc--HHHHHHHHHh
Confidence 34566778899988874 4777777777663 3499999999988887754 4553222222222 444455442
Q ss_pred ---CCCccEEEEccc---ChHhHHHHHHHhhCCCceEEEEc
Q 018529 237 ---NGGVDRSVECTG---NIDNMISAFECVHDGWGVAVLVG 271 (354)
Q Consensus 237 ---~~~~dvv~d~~g---~~~~~~~~~~~l~~~~g~~v~~g 271 (354)
.+.||+||.-.. -...++.+.+.++++ |.+++-.
T Consensus 139 ~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~G-G~ii~dn 178 (234)
T PLN02781 139 NDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVG-GIIAFDN 178 (234)
T ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-eEEEEEc
Confidence 237999985432 235688889999997 8877544
No 230
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.55 E-value=0.017 Score=51.43 Aligned_cols=79 Identities=23% Similarity=0.339 Sum_probs=53.3
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCC--ceE---EcCCCCChhHHHHHHHHcC--CC
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGV--TDF---VNTSEHDRPIQEVIAEMTN--GG 239 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~--~~v---~~~~~~~~~~~~~i~~~~~--~~ 239 (354)
+++++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++++. ... .|..+.+ ++.+.+.+... ++
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~g~ 85 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTDLA-AMQAAAEEAVERFGG 85 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHH-HHHHHHHHHHHHcCC
Confidence 5789999987 9999999999999999 899999988876654 44542 111 3333321 22233332221 47
Q ss_pred ccEEEEcccC
Q 018529 240 VDRSVECTGN 249 (354)
Q Consensus 240 ~dvv~d~~g~ 249 (354)
+|++++++|.
T Consensus 86 id~vI~nAG~ 95 (296)
T PRK05872 86 IDVVVANAGI 95 (296)
T ss_pred CCEEEECCCc
Confidence 9999999884
No 231
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=96.55 E-value=0.012 Score=58.41 Aligned_cols=76 Identities=26% Similarity=0.314 Sum_probs=56.3
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChh---------------------hHHHHHhcCCceEEcCCCCC-h
Q 018529 169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK---------------------RFEEAKKFGVTDFVNTSEHD-R 226 (354)
Q Consensus 169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~---------------------~~~~~~~lg~~~v~~~~~~~-~ 226 (354)
.+++|+|+|+|+.|+.++..+...|. .|+++++.+. +.++++++|++..++..-.. .
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence 48999999999999999999999999 7888876652 55677889987666543221 1
Q ss_pred hHHHHHHHHcCCCccEEEEcccCh
Q 018529 227 PIQEVIAEMTNGGVDRSVECTGNI 250 (354)
Q Consensus 227 ~~~~~i~~~~~~~~dvv~d~~g~~ 250 (354)
.+. ++. .++|.||.++|..
T Consensus 388 ~~~----~l~-~~~DaV~latGa~ 406 (639)
T PRK12809 388 TFS----DLT-SEYDAVFIGVGTY 406 (639)
T ss_pred CHH----HHH-hcCCEEEEeCCCC
Confidence 122 221 2689999999873
No 232
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=96.55 E-value=0.035 Score=47.13 Aligned_cols=104 Identities=24% Similarity=0.261 Sum_probs=73.0
Q ss_pred hhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHc
Q 018529 162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT 236 (354)
Q Consensus 162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~ 236 (354)
....++.+|++|+=.|.|+ |.+++.+|++.|. .+|+..+..++..+.+++ +|....+.....| ..+.+..
T Consensus 87 ~~~~gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~D--v~~~~~~-- 161 (256)
T COG2519 87 VARLGISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLGD--VREGIDE-- 161 (256)
T ss_pred HHHcCCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEecc--ccccccc--
Confidence 4578999999999888764 8888899988875 599999999998888754 4553322222222 2222111
Q ss_pred CCCccEEEEcccC-hHhHHHHHHHhhCCCceEEEEcC
Q 018529 237 NGGVDRSVECTGN-IDNMISAFECVHDGWGVAVLVGV 272 (354)
Q Consensus 237 ~~~~dvv~d~~g~-~~~~~~~~~~l~~~~g~~v~~g~ 272 (354)
..+|+||-=.+. -+.++.+.+.|+++ |.++++.-
T Consensus 162 -~~vDav~LDmp~PW~~le~~~~~Lkpg-g~~~~y~P 196 (256)
T COG2519 162 -EDVDAVFLDLPDPWNVLEHVSDALKPG-GVVVVYSP 196 (256)
T ss_pred -cccCEEEEcCCChHHHHHHHHHHhCCC-cEEEEEcC
Confidence 268988644443 46899999999997 99988853
No 233
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=96.53 E-value=0.01 Score=52.00 Aligned_cols=45 Identities=36% Similarity=0.425 Sum_probs=40.2
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh
Q 018529 168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK 212 (354)
Q Consensus 168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~ 212 (354)
.++++++|+|+|+.+.+++.-++..|+.+++++.|+.+|.+.+.+
T Consensus 124 ~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~ 168 (283)
T COG0169 124 VTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELAD 168 (283)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence 458999999999999999999999998899999999998776654
No 234
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=96.51 E-value=0.009 Score=52.74 Aligned_cols=75 Identities=13% Similarity=0.035 Sum_probs=51.3
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcCCc-eEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529 169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVT-DFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 246 (354)
Q Consensus 169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~lg~~-~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~ 246 (354)
++.+++|+|+|++|.+++..+..+|+.+|+++.|+.+|.+.+. +++.. .+..... . +.+.... ..+|+|++|
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~----~-~~~~~~~-~~~DiVIna 197 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEG----D-SGGLAIE-KAAEVLVST 197 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccc----h-hhhhhcc-cCCCEEEEC
Confidence 5789999999999999999999999889999999988876653 34321 1111110 0 1111111 258999999
Q ss_pred ccC
Q 018529 247 TGN 249 (354)
Q Consensus 247 ~g~ 249 (354)
++.
T Consensus 198 Tp~ 200 (282)
T TIGR01809 198 VPA 200 (282)
T ss_pred CCC
Confidence 875
No 235
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.51 E-value=0.048 Score=46.43 Aligned_cols=91 Identities=21% Similarity=0.240 Sum_probs=60.3
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHcCCc--EEEEEcCC----hhh--------HHHHHhcCCceEEcCCCCChhHHHHHH
Q 018529 168 ERGSSVAVFGLGAVGLAAAEGARIAGAS--RIIGVDRS----SKR--------FEEAKKFGVTDFVNTSEHDRPIQEVIA 233 (354)
Q Consensus 168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~--~vi~v~~~----~~~--------~~~~~~lg~~~v~~~~~~~~~~~~~i~ 233 (354)
-.+.+++|+|+|..|...+..+...|.+ +++.++++ .++ .+++++++... . +. ++.+.++
T Consensus 23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~---~~--~l~~~l~ 96 (226)
T cd05311 23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T---GG--TLKEALK 96 (226)
T ss_pred ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c---cC--CHHHHHh
Confidence 4567999999999999999988899997 89999998 443 33455544211 1 11 1434342
Q ss_pred HHcCCCccEEEEcccChHhH-HHHHHHhhCCCceEEEEc
Q 018529 234 EMTNGGVDRSVECTGNIDNM-ISAFECVHDGWGVAVLVG 271 (354)
Q Consensus 234 ~~~~~~~dvv~d~~g~~~~~-~~~~~~l~~~~g~~v~~g 271 (354)
++|+++++++. ..+ ...++.+.+. ..++.+.
T Consensus 97 -----~~dvlIgaT~~-G~~~~~~l~~m~~~-~ivf~ls 128 (226)
T cd05311 97 -----GADVFIGVSRP-GVVKKEMIKKMAKD-PIVFALA 128 (226)
T ss_pred -----cCCEEEeCCCC-CCCCHHHHHhhCCC-CEEEEeC
Confidence 38999999973 333 4566777665 5544443
No 236
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.50 E-value=0.042 Score=47.59 Aligned_cols=79 Identities=25% Similarity=0.282 Sum_probs=50.3
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-h---cCCc-eEE--cCCCCChhHHHHHHHHc--CC
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-K---FGVT-DFV--NTSEHDRPIQEVIAEMT--NG 238 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~---lg~~-~v~--~~~~~~~~~~~~i~~~~--~~ 238 (354)
++.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+. + .+.. ..+ |..+. ..+.+.+.+.. .+
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~ 80 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDE-EAINAGIDYAVETFG 80 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH-HHHHHHHHHHHHHcC
Confidence 3578999987 9999999888888899 8999988887655432 2 2332 122 33222 12323233221 13
Q ss_pred CccEEEEcccC
Q 018529 239 GVDRSVECTGN 249 (354)
Q Consensus 239 ~~dvv~d~~g~ 249 (354)
++|++|.++|.
T Consensus 81 ~~d~vi~~a~~ 91 (258)
T PRK12429 81 GVDILVNNAGI 91 (258)
T ss_pred CCCEEEECCCC
Confidence 78999998863
No 237
>PRK06180 short chain dehydrogenase; Provisional
Probab=96.49 E-value=0.018 Score=50.67 Aligned_cols=79 Identities=24% Similarity=0.350 Sum_probs=52.5
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCce--E--EcCCCCChhHHHHHHHHcC--CCcc
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--F--VNTSEHDRPIQEVIAEMTN--GGVD 241 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~--v--~~~~~~~~~~~~~i~~~~~--~~~d 241 (354)
.++++||+|+ |.+|...++.+...|+ +|+++++++++.+.+.+..... . .|..+.+ .+.+.++.... +++|
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~-~~~~~~~~~~~~~~~~d 80 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTDFD-AIDAVVADAEATFGPID 80 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHH-HHHHHHHHHHHHhCCCC
Confidence 3578999987 9999999998888899 8999999988877665532211 1 2333221 22222332221 3689
Q ss_pred EEEEcccC
Q 018529 242 RSVECTGN 249 (354)
Q Consensus 242 vv~d~~g~ 249 (354)
++++++|.
T Consensus 81 ~vv~~ag~ 88 (277)
T PRK06180 81 VLVNNAGY 88 (277)
T ss_pred EEEECCCc
Confidence 99999875
No 238
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=96.49 E-value=0.021 Score=49.93 Aligned_cols=70 Identities=23% Similarity=0.138 Sum_probs=50.7
Q ss_pred CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCceEEcCCCCChhHHHHHHHHcCCCccEEE
Q 018529 166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV 244 (354)
Q Consensus 166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~ 244 (354)
+...+++++|+|+|+.+.+++..+...|+.+|+++.|+.++.+.+.+ ++.. +.+.+ ....+|+|+
T Consensus 118 ~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~-----------~~~~~---~~~~~dlvI 183 (272)
T PRK12550 118 QVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE-----------WRPDL---GGIEADILV 183 (272)
T ss_pred CCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc-----------chhhc---ccccCCEEE
Confidence 44456789999999999999999999999889999999988776543 4321 11011 112589999
Q ss_pred EcccC
Q 018529 245 ECTGN 249 (354)
Q Consensus 245 d~~g~ 249 (354)
+|++.
T Consensus 184 NaTp~ 188 (272)
T PRK12550 184 NVTPI 188 (272)
T ss_pred ECCcc
Confidence 99853
No 239
>PRK08339 short chain dehydrogenase; Provisional
Probab=96.49 E-value=0.023 Score=49.66 Aligned_cols=79 Identities=19% Similarity=0.326 Sum_probs=51.7
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-c----CCc-eE--EcCCCCChhHHHHHHHHc-CC
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F----GVT-DF--VNTSEHDRPIQEVIAEMT-NG 238 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-l----g~~-~v--~~~~~~~~~~~~~i~~~~-~~ 238 (354)
+++++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.+ + +.. .. .|..+.+ +..+.+.+.. .+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~i~~~~~~~~~~g 84 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKRE-DLERTVKELKNIG 84 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHH-HHHHHHHHHHhhC
Confidence 4788999987 8999999999999999 89999998877654432 2 322 11 2333321 2222233221 24
Q ss_pred CccEEEEcccC
Q 018529 239 GVDRSVECTGN 249 (354)
Q Consensus 239 ~~dvv~d~~g~ 249 (354)
++|++++++|.
T Consensus 85 ~iD~lv~nag~ 95 (263)
T PRK08339 85 EPDIFFFSTGG 95 (263)
T ss_pred CCcEEEECCCC
Confidence 79999998874
No 240
>PRK01581 speE spermidine synthase; Validated
Probab=96.47 E-value=0.067 Score=48.42 Aligned_cols=100 Identities=14% Similarity=0.044 Sum_probs=66.1
Q ss_pred CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcC-----------CceEEcCCCCChhHHHHHHHH
Q 018529 167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG-----------VTDFVNTSEHDRPIQEVIAEM 235 (354)
Q Consensus 167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg-----------~~~v~~~~~~~~~~~~~i~~~ 235 (354)
....++|||+|+| .|.++..+++..+..+|++++.+++-.+.++++. ..++-.. -. +..+.++.
T Consensus 148 h~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vv-i~--Da~~fL~~- 222 (374)
T PRK01581 148 VIDPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVH-VC--DAKEFLSS- 222 (374)
T ss_pred CCCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEE-EC--cHHHHHHh-
Confidence 3445799999976 4667777777766669999999999999988631 1111110 11 14444544
Q ss_pred cCCCccEEEEcccC-----------hHhHHHHHHHhhCCCceEEEEcC
Q 018529 236 TNGGVDRSVECTGN-----------IDNMISAFECVHDGWGVAVLVGV 272 (354)
Q Consensus 236 ~~~~~dvv~d~~g~-----------~~~~~~~~~~l~~~~g~~v~~g~ 272 (354)
..+.+|+||--... .+.++.+.+.|+++ |.++....
T Consensus 223 ~~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPg-GV~V~Qs~ 269 (374)
T PRK01581 223 PSSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTED-GAFVCQSN 269 (374)
T ss_pred cCCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCC-cEEEEecC
Confidence 33479999754321 24678899999997 99887654
No 241
>PLN02476 O-methyltransferase
Probab=96.47 E-value=0.034 Score=48.61 Aligned_cols=106 Identities=21% Similarity=0.216 Sum_probs=71.6
Q ss_pred hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHc-
Q 018529 163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT- 236 (354)
Q Consensus 163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~- 236 (354)
...+..+.++||=+|.+ +|+.++.+|+.++. .+|+.++.+++..+.+++ .|...-+.....+ ..+.+.++.
T Consensus 112 ~L~~~~~ak~VLEIGT~-tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~Gd--A~e~L~~l~~ 188 (278)
T PLN02476 112 MLVQILGAERCIEVGVY-TGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHGL--AAESLKSMIQ 188 (278)
T ss_pred HHHHhcCCCeEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC--HHHHHHHHHh
Confidence 34566778899999874 47888888887742 289999999998887754 5765333333333 445555442
Q ss_pred ---CCCccEEEEcccC---hHhHHHHHHHhhCCCceEEEEcC
Q 018529 237 ---NGGVDRSVECTGN---IDNMISAFECVHDGWGVAVLVGV 272 (354)
Q Consensus 237 ---~~~~dvv~d~~g~---~~~~~~~~~~l~~~~g~~v~~g~ 272 (354)
.+.||.||--... ...++.+++.|+++ |.++.=..
T Consensus 189 ~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~G-GvIV~DNv 229 (278)
T PLN02476 189 NGEGSSYDFAFVDADKRMYQDYFELLLQLVRVG-GVIVMDNV 229 (278)
T ss_pred cccCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEecC
Confidence 2479999754433 35688899999997 88775543
No 242
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=96.47 E-value=0.025 Score=47.62 Aligned_cols=95 Identities=25% Similarity=0.283 Sum_probs=63.3
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCc--eEEcCCCCChhHHHHHHHHcCCCccEEEE
Q 018529 168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT--DFVNTSEHDRPIQEVIAEMTNGGVDRSVE 245 (354)
Q Consensus 168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~--~v~~~~~~~~~~~~~i~~~~~~~~dvv~d 245 (354)
-+|.+||=+|||+ |.++.-+|+ .|+ .|+++|-+++..+.++..... .-++|... ..+.+.+.. +.||+|++
T Consensus 58 l~g~~vLDvGCGg-G~Lse~mAr-~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~~---~~edl~~~~-~~FDvV~c 130 (243)
T COG2227 58 LPGLRVLDVGCGG-GILSEPLAR-LGA-SVTGIDASEKPIEVAKLHALESGVNIDYRQA---TVEDLASAG-GQFDVVTC 130 (243)
T ss_pred CCCCeEEEecCCc-cHhhHHHHH-CCC-eeEEecCChHHHHHHHHhhhhccccccchhh---hHHHHHhcC-CCccEEEE
Confidence 4788999999864 666666665 467 999999999999988742221 12445443 223333321 48999987
Q ss_pred -----cccCh-HhHHHHHHHhhCCCceEEEE
Q 018529 246 -----CTGNI-DNMISAFECVHDGWGVAVLV 270 (354)
Q Consensus 246 -----~~g~~-~~~~~~~~~l~~~~g~~v~~ 270 (354)
-+..+ ..+..+.+.++|+ |.+++.
T Consensus 131 mEVlEHv~dp~~~~~~c~~lvkP~-G~lf~S 160 (243)
T COG2227 131 MEVLEHVPDPESFLRACAKLVKPG-GILFLS 160 (243)
T ss_pred hhHHHccCCHHHHHHHHHHHcCCC-cEEEEe
Confidence 34443 3677899999997 776543
No 243
>PRK04457 spermidine synthase; Provisional
Probab=96.45 E-value=0.042 Score=47.96 Aligned_cols=97 Identities=19% Similarity=0.143 Sum_probs=66.7
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhc-CC----ceEEcCCCCChhHHHHHHHHcCCCccE
Q 018529 168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GV----TDFVNTSEHDRPIQEVIAEMTNGGVDR 242 (354)
Q Consensus 168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~l-g~----~~v~~~~~~~~~~~~~i~~~~~~~~dv 242 (354)
.++++||++|+|. |.++..+++.....++++++.+++-.+.+++. +. +.+-. ...+ ..+.+.+. .+.+|+
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v-~~~D--a~~~l~~~-~~~yD~ 139 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEV-IEAD--GAEYIAVH-RHSTDV 139 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEE-EECC--HHHHHHhC-CCCCCE
Confidence 4567899999875 88888888877544999999999999988773 32 12211 1122 44445443 247999
Q ss_pred EE-EcccC---------hHhHHHHHHHhhCCCceEEEE
Q 018529 243 SV-ECTGN---------IDNMISAFECVHDGWGVAVLV 270 (354)
Q Consensus 243 v~-d~~g~---------~~~~~~~~~~l~~~~g~~v~~ 270 (354)
|+ |.... .+.++.+.+.|+++ |.++.-
T Consensus 140 I~~D~~~~~~~~~~l~t~efl~~~~~~L~pg-Gvlvin 176 (262)
T PRK04457 140 ILVDGFDGEGIIDALCTQPFFDDCRNALSSD-GIFVVN 176 (262)
T ss_pred EEEeCCCCCCCccccCcHHHHHHHHHhcCCC-cEEEEE
Confidence 97 43221 36788999999997 998763
No 244
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.45 E-value=0.022 Score=50.00 Aligned_cols=78 Identities=24% Similarity=0.329 Sum_probs=51.6
Q ss_pred CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcC-Cce-EEcCCCCChhHHHHHHHHc--CCCccEE
Q 018529 170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFG-VTD-FVNTSEHDRPIQEVIAEMT--NGGVDRS 243 (354)
Q Consensus 170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg-~~~-v~~~~~~~~~~~~~i~~~~--~~~~dvv 243 (354)
+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+ ++++ +.. ..|..+.+ ++.+.+.... .+++|++
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~l 82 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTDPA-SFAAFLDAVEADLGPIDVL 82 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCCHH-HHHHHHHHHHHHcCCCCEE
Confidence 578999987 9999998888888899 788888988876654 3444 222 22333322 2333333322 1478999
Q ss_pred EEcccC
Q 018529 244 VECTGN 249 (354)
Q Consensus 244 ~d~~g~ 249 (354)
++++|.
T Consensus 83 i~~ag~ 88 (273)
T PRK07825 83 VNNAGV 88 (273)
T ss_pred EECCCc
Confidence 999874
No 245
>PRK09186 flagellin modification protein A; Provisional
Probab=96.45 E-value=0.057 Score=46.73 Aligned_cols=78 Identities=19% Similarity=0.437 Sum_probs=50.5
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-Hhc----CCce----EEcCCCCChhHHHHHHHHcC-
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKF----GVTD----FVNTSEHDRPIQEVIAEMTN- 237 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~l----g~~~----v~~~~~~~~~~~~~i~~~~~- 237 (354)
++.++||+|+ |.+|...+..+...|+ +|+.+.+++++.+.+ +++ +... ..|..+.+ .+.+.+.+...
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~-~~~~~~~~~~~~ 80 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQE-SLEEFLSKSAEK 80 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHH-HHHHHHHHHHHH
Confidence 4688999987 9999999988888999 888888887775543 222 2211 22333322 23333333221
Q ss_pred -CCccEEEEccc
Q 018529 238 -GGVDRSVECTG 248 (354)
Q Consensus 238 -~~~dvv~d~~g 248 (354)
+++|+++.+++
T Consensus 81 ~~~id~vi~~A~ 92 (256)
T PRK09186 81 YGKIDGAVNCAY 92 (256)
T ss_pred cCCccEEEECCc
Confidence 36899999885
No 246
>PRK06398 aldose dehydrogenase; Validated
Probab=96.42 E-value=0.036 Score=48.26 Aligned_cols=74 Identities=20% Similarity=0.269 Sum_probs=48.0
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCc-eEEcCCCCChhHHHHHHHHc--CCCccEEE
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMT--NGGVDRSV 244 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~-~v~~~~~~~~~~~~~i~~~~--~~~~dvv~ 244 (354)
.++++||+|+ |++|...+..+...|+ +|+.+++++++.. ... ...|..+.. .+.+.+.+.. .+.+|+++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~~~~~~D~~~~~-~i~~~~~~~~~~~~~id~li 77 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DVDYFKVDVSNKE-QVIKGIDYVISKYGRIDILV 77 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ceEEEEccCCCHH-HHHHHHHHHHHHcCCCCEEE
Confidence 4679999987 9999999999999999 8888888765432 111 112333321 2333333322 13689999
Q ss_pred EcccC
Q 018529 245 ECTGN 249 (354)
Q Consensus 245 d~~g~ 249 (354)
+++|.
T Consensus 78 ~~Ag~ 82 (258)
T PRK06398 78 NNAGI 82 (258)
T ss_pred ECCCC
Confidence 98874
No 247
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=96.40 E-value=0.054 Score=45.15 Aligned_cols=82 Identities=29% Similarity=0.306 Sum_probs=56.6
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCceEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529 168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 246 (354)
Q Consensus 168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~ 246 (354)
-.|.+++|.|.|.+|..+++.+...|+ +|++++++.++.+.+.+ +|+. .++..+ + ....+|+++-|
T Consensus 26 l~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~-~v~~~~----l-------~~~~~Dv~vp~ 92 (200)
T cd01075 26 LEGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGAT-VVAPEE----I-------YSVDADVFAPC 92 (200)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE-EEcchh----h-------ccccCCEEEec
Confidence 357899999999999999999999999 89999999888776644 4653 222211 1 11158898866
Q ss_pred ccChHhHHHHHHHhhC
Q 018529 247 TGNIDNMISAFECVHD 262 (354)
Q Consensus 247 ~g~~~~~~~~~~~l~~ 262 (354)
+.....-...++.++.
T Consensus 93 A~~~~I~~~~~~~l~~ 108 (200)
T cd01075 93 ALGGVINDDTIPQLKA 108 (200)
T ss_pred ccccccCHHHHHHcCC
Confidence 5443444455566644
No 248
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.40 E-value=0.02 Score=49.56 Aligned_cols=79 Identities=23% Similarity=0.297 Sum_probs=51.4
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCce-E--EcCCCCChhHHHHHHHHc--CC
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-F--VNTSEHDRPIQEVIAEMT--NG 238 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~-v--~~~~~~~~~~~~~i~~~~--~~ 238 (354)
.++++||+|+ |++|...+..+...|+ +|+.++++.++.+.+.+ .+... . .|..+.+ .+.+.+.+.. .+
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g 85 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQ-QVTSMLDQVTAELG 85 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHH-HHHHHHHHHHHHhC
Confidence 4789999987 9999999999889999 89999888877654422 23221 1 2333221 2323233221 14
Q ss_pred CccEEEEcccC
Q 018529 239 GVDRSVECTGN 249 (354)
Q Consensus 239 ~~dvv~d~~g~ 249 (354)
++|+++++.|.
T Consensus 86 ~id~lv~~ag~ 96 (253)
T PRK05867 86 GIDIAVCNAGI 96 (253)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 249
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.39 E-value=0.085 Score=45.15 Aligned_cols=79 Identities=22% Similarity=0.287 Sum_probs=51.0
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCceE---EcCCCCChhHHHHHHHHc--CC
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF---VNTSEHDRPIQEVIAEMT--NG 238 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~v---~~~~~~~~~~~~~i~~~~--~~ 238 (354)
++.++||+|+ |.+|...++.+...|. .|+++.+++++.+.+ ++.+.... .|..+. ..+.+.+.+.. .+
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~ 81 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDE-AAVRALIEAAVEAFG 81 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCH-HHHHHHHHHHHHHhC
Confidence 3568999997 9999999988888899 799999988775443 23343222 233222 12333333321 13
Q ss_pred CccEEEEcccC
Q 018529 239 GVDRSVECTGN 249 (354)
Q Consensus 239 ~~dvv~d~~g~ 249 (354)
.+|.++.++|.
T Consensus 82 ~id~vi~~ag~ 92 (246)
T PRK05653 82 ALDILVNNAGI 92 (246)
T ss_pred CCCEEEECCCc
Confidence 68999998864
No 250
>PRK07774 short chain dehydrogenase; Provisional
Probab=96.37 E-value=0.024 Score=48.87 Aligned_cols=79 Identities=25% Similarity=0.282 Sum_probs=49.5
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-h---cCCc-e--EEcCCCCChhHHHHHHHHc--CC
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-K---FGVT-D--FVNTSEHDRPIQEVIAEMT--NG 238 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~---lg~~-~--v~~~~~~~~~~~~~i~~~~--~~ 238 (354)
.+.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+. + .+.. . ..|..+.. .+.+.+++.. .+
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~ 82 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPD-SAKAMADATVSAFG 82 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHH-HHHHHHHHHHHHhC
Confidence 4678999987 9999999988888898 8999988876654332 2 2221 1 12332221 1222222221 13
Q ss_pred CccEEEEcccC
Q 018529 239 GVDRSVECTGN 249 (354)
Q Consensus 239 ~~dvv~d~~g~ 249 (354)
++|+||.++|.
T Consensus 83 ~id~vi~~ag~ 93 (250)
T PRK07774 83 GIDYLVNNAAI 93 (250)
T ss_pred CCCEEEECCCC
Confidence 68999999884
No 251
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=96.36 E-value=0.011 Score=49.23 Aligned_cols=98 Identities=16% Similarity=0.239 Sum_probs=62.9
Q ss_pred hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHc-C
Q 018529 163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT-N 237 (354)
Q Consensus 163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~-~ 237 (354)
+.....++.+||-+|+|. |..+..+|+. |. +|++++.+++..+.+++ .+...+. ....+ +. +.. .
T Consensus 24 ~~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v~-~~~~d--~~----~~~~~ 93 (197)
T PRK11207 24 EAVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNLH-TAVVD--LN----NLTFD 93 (197)
T ss_pred HhcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcce-EEecC--hh----hCCcC
Confidence 344556778999999875 7778888875 77 99999999987776654 2322111 11111 11 111 2
Q ss_pred CCccEEEEccc----C----hHhHHHHHHHhhCCCceEEEEc
Q 018529 238 GGVDRSVECTG----N----IDNMISAFECVHDGWGVAVLVG 271 (354)
Q Consensus 238 ~~~dvv~d~~g----~----~~~~~~~~~~l~~~~g~~v~~g 271 (354)
+.+|+|+.... . ...+..+.+.|+++ |.++++.
T Consensus 94 ~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~~~~~~ 134 (197)
T PRK11207 94 GEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPG-GYNLIVA 134 (197)
T ss_pred CCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence 37999987533 1 24677888899997 9865544
No 252
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=96.35 E-value=0.037 Score=51.38 Aligned_cols=90 Identities=27% Similarity=0.364 Sum_probs=57.1
Q ss_pred EEEEcCChhHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHh--cCC--ce-EEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529 173 VAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKK--FGV--TD-FVNTSEHDRPIQEVIAEMTNGGVDRSVEC 246 (354)
Q Consensus 173 vlI~G~g~~G~~a~~~a~~~g~~-~vi~v~~~~~~~~~~~~--lg~--~~-v~~~~~~~~~~~~~i~~~~~~~~dvv~d~ 246 (354)
|+|+|+|.+|..+++.+...+.. +|++.+++.++.+.+.+ .+. .. .++..+ . +.+.++.. +.|+|++|
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~----~-~~l~~~~~-~~dvVin~ 74 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND----P-ESLAELLR-GCDVVINC 74 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT----H-HHHHHHHT-TSSEEEE-
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC----H-HHHHHHHh-cCCEEEEC
Confidence 68899999999999998887754 89999999999777654 222 21 233322 2 22444433 46999999
Q ss_pred ccChHhHHHHHHHhhCCCceEEE
Q 018529 247 TGNIDNMISAFECVHDGWGVAVL 269 (354)
Q Consensus 247 ~g~~~~~~~~~~~l~~~~g~~v~ 269 (354)
+|.......+..|+..+ -.++.
T Consensus 75 ~gp~~~~~v~~~~i~~g-~~yvD 96 (386)
T PF03435_consen 75 AGPFFGEPVARACIEAG-VHYVD 96 (386)
T ss_dssp SSGGGHHHHHHHHHHHT--EEEE
T ss_pred CccchhHHHHHHHHHhC-CCeec
Confidence 98754455555667665 56665
No 253
>PRK06196 oxidoreductase; Provisional
Probab=96.35 E-value=0.029 Score=50.41 Aligned_cols=79 Identities=19% Similarity=0.280 Sum_probs=51.2
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcC-Cce-EEcCCCCChhHHHHHHHHcC--CCccE
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFG-VTD-FVNTSEHDRPIQEVIAEMTN--GGVDR 242 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg-~~~-v~~~~~~~~~~~~~i~~~~~--~~~dv 242 (354)
.+.++||+|+ |++|...+..+...|+ +|++++++.++.+.+ .++. +.. ..|..+. ..+.+.+.+... +++|+
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~-~~v~~~~~~~~~~~~~iD~ 102 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLADL-ESVRAFAERFLDSGRRIDI 102 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCCH-HHHHHHHHHHHhcCCCCCE
Confidence 4678999987 9999998888888899 888888888765543 3332 211 1233322 123333333322 47999
Q ss_pred EEEcccC
Q 018529 243 SVECTGN 249 (354)
Q Consensus 243 v~d~~g~ 249 (354)
+++++|.
T Consensus 103 li~nAg~ 109 (315)
T PRK06196 103 LINNAGV 109 (315)
T ss_pred EEECCCC
Confidence 9998873
No 254
>PRK09072 short chain dehydrogenase; Provisional
Probab=96.35 E-value=0.03 Score=48.78 Aligned_cols=78 Identities=24% Similarity=0.400 Sum_probs=50.3
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-c--CCc-eEE--cCCCCC--hhHHHHHHHHcCCC
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F--GVT-DFV--NTSEHD--RPIQEVIAEMTNGG 239 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-l--g~~-~v~--~~~~~~--~~~~~~i~~~~~~~ 239 (354)
++.++||+|+ |.+|...+..+...|+ .|+++++++++.+.+.+ + +.. ..+ |..+.+ ..+.+.+.+ .+.
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~--~~~ 80 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARARE--MGG 80 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHh--cCC
Confidence 4678999987 9999998888888899 89999998877655432 2 211 122 222211 112222222 247
Q ss_pred ccEEEEcccC
Q 018529 240 VDRSVECTGN 249 (354)
Q Consensus 240 ~dvv~d~~g~ 249 (354)
+|+++.++|.
T Consensus 81 id~lv~~ag~ 90 (263)
T PRK09072 81 INVLINNAGV 90 (263)
T ss_pred CCEEEECCCC
Confidence 8999999875
No 255
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.34 E-value=0.028 Score=48.47 Aligned_cols=79 Identities=20% Similarity=0.335 Sum_probs=51.5
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce-E--EcCCCCChhHHHHHHHHcC--C
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMTN--G 238 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~i~~~~~--~ 238 (354)
+++++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++.+... . .|..+. ..+.+.++.... +
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~ 81 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDE-EDVEATFAQIAEDFG 81 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCH-HHHHHHHHHHHHHcC
Confidence 4789999987 9999999999998999 899999988765543 2234331 1 222221 123233333221 3
Q ss_pred CccEEEEcccC
Q 018529 239 GVDRSVECTGN 249 (354)
Q Consensus 239 ~~dvv~d~~g~ 249 (354)
++|++|+++|.
T Consensus 82 ~id~vi~~ag~ 92 (253)
T PRK08217 82 QLNGLINNAGI 92 (253)
T ss_pred CCCEEEECCCc
Confidence 68999998873
No 256
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=96.34 E-value=0.034 Score=47.89 Aligned_cols=79 Identities=25% Similarity=0.350 Sum_probs=50.2
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChh--hHHHHHhcCCce-E--EcCCCCChhHHHHHHHHcC--CCc
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK--RFEEAKKFGVTD-F--VNTSEHDRPIQEVIAEMTN--GGV 240 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~--~~~~~~~lg~~~-v--~~~~~~~~~~~~~i~~~~~--~~~ 240 (354)
.++++||+|+ |.+|...+..+...|+ +|+.+++++. ..+.+++++... . .|..+. ..+.+.+++... +++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~~ 81 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSDI-EAIKALVDSAVEEFGHI 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCCH-HHHHHHHHHHHHHcCCC
Confidence 4789999997 9999998888888999 8888887652 233344455321 2 233222 123333333221 369
Q ss_pred cEEEEcccC
Q 018529 241 DRSVECTGN 249 (354)
Q Consensus 241 dvv~d~~g~ 249 (354)
|++++++|.
T Consensus 82 d~li~~ag~ 90 (248)
T TIGR01832 82 DILVNNAGI 90 (248)
T ss_pred CEEEECCCC
Confidence 999998874
No 257
>PRK06128 oxidoreductase; Provisional
Probab=96.34 E-value=0.072 Score=47.49 Aligned_cols=79 Identities=18% Similarity=0.203 Sum_probs=47.3
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChh--h----HHHHHhcCCceE---EcCCCCChhHHHHHHHHc--
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK--R----FEEAKKFGVTDF---VNTSEHDRPIQEVIAEMT-- 236 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~--~----~~~~~~lg~~~v---~~~~~~~~~~~~~i~~~~-- 236 (354)
.++++||+|+ |.+|...+..+...|+ +|+.+.++.+ + .+.+++.|.... .|..+. ..+.+.+.+..
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~ 131 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDE-AFCRQLVERAVKE 131 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCH-HHHHHHHHHHHHH
Confidence 4689999987 9999998888888899 7776655432 1 223334454322 223221 12222232221
Q ss_pred CCCccEEEEcccC
Q 018529 237 NGGVDRSVECTGN 249 (354)
Q Consensus 237 ~~~~dvv~d~~g~ 249 (354)
.+++|++++++|.
T Consensus 132 ~g~iD~lV~nAg~ 144 (300)
T PRK06128 132 LGGLDILVNIAGK 144 (300)
T ss_pred hCCCCEEEECCcc
Confidence 1379999998874
No 258
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.33 E-value=0.012 Score=55.89 Aligned_cols=94 Identities=11% Similarity=0.105 Sum_probs=62.7
Q ss_pred hhcCCCCCCeEE----EEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCc-eEEcCCCCChhHHHHHHHHc
Q 018529 163 NVAKPERGSSVA----VFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMT 236 (354)
Q Consensus 163 ~~~~~~~~~~vl----I~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~-~v~~~~~~~~~~~~~i~~~~ 236 (354)
...++++|+.+| |+|+ |++|.+++|+++..|+ .|+++.+.+.+....+..+.. .+++..... +.+.+....
T Consensus 27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~l~~~~ 103 (450)
T PRK08261 27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFDATGIT--DPADLKALY 103 (450)
T ss_pred cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEECCCCC--CHHHHHHHH
Confidence 467788999988 8865 9999999999999999 888886666544444444444 344444332 333333221
Q ss_pred CCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCC
Q 018529 237 NGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 274 (354)
Q Consensus 237 ~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~ 274 (354)
..+...++.|.++ |+++.++...
T Consensus 104 --------------~~~~~~l~~l~~~-griv~i~s~~ 126 (450)
T PRK08261 104 --------------EFFHPVLRSLAPC-GRVVVLGRPP 126 (450)
T ss_pred --------------HHHHHHHHhccCC-CEEEEEcccc
Confidence 3555667777776 8888877653
No 259
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=96.32 E-value=0.017 Score=57.52 Aligned_cols=76 Identities=24% Similarity=0.292 Sum_probs=53.1
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChh---------------------hHHHHHhcCCceEEcCCCC-C
Q 018529 168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK---------------------RFEEAKKFGVTDFVNTSEH-D 225 (354)
Q Consensus 168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~---------------------~~~~~~~lg~~~v~~~~~~-~ 225 (354)
..+++|+|+|+|+.|+.++..+...|+ +|+++++.+. ..++++++|++...+..-. +
T Consensus 325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~ 403 (654)
T PRK12769 325 KSDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKD 403 (654)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCc
Confidence 468899999999999999999999999 7888876542 3556677887644433211 1
Q ss_pred hhHHHHHHHHcCCCccEEEEcccC
Q 018529 226 RPIQEVIAEMTNGGVDRSVECTGN 249 (354)
Q Consensus 226 ~~~~~~i~~~~~~~~dvv~d~~g~ 249 (354)
-.+. .+. ..+|.||.++|.
T Consensus 404 i~~~-~~~----~~~DavilAtGa 422 (654)
T PRK12769 404 ISLE-SLL----EDYDAVFVGVGT 422 (654)
T ss_pred CCHH-HHH----hcCCEEEEeCCC
Confidence 0121 111 269999999886
No 260
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.31 E-value=0.022 Score=49.34 Aligned_cols=79 Identities=27% Similarity=0.310 Sum_probs=51.2
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCce--E--EcCCCCChhHHHHHHHHcC--CCcc
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--F--VNTSEHDRPIQEVIAEMTN--GGVD 241 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~--v--~~~~~~~~~~~~~i~~~~~--~~~d 241 (354)
++.++||+|+ |.+|...++.+...|+ +|+.++++.+..+...++.... . .|..+. .++.+.+.+... +++|
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~~d 91 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDS-QSVEAAVAAVISAFGRID 91 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCCH-HHHHHHHHHHHHHhCCCC
Confidence 4679999997 9999998888888999 8999988877655555442211 2 233221 122222222211 3689
Q ss_pred EEEEcccC
Q 018529 242 RSVECTGN 249 (354)
Q Consensus 242 vv~d~~g~ 249 (354)
+++.++|.
T Consensus 92 ~vi~~ag~ 99 (255)
T PRK06841 92 ILVNSAGV 99 (255)
T ss_pred EEEECCCC
Confidence 99999874
No 261
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=96.30 E-value=0.054 Score=44.94 Aligned_cols=76 Identities=29% Similarity=0.305 Sum_probs=49.4
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-c----CCceE-EcCCCCChhHHHHHHHHcCCCcc
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F----GVTDF-VNTSEHDRPIQEVIAEMTNGGVD 241 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-l----g~~~v-~~~~~~~~~~~~~i~~~~~~~~d 241 (354)
++.+++|+|+ |.+|...+..+...|. +|+.+.++.++.+.+.+ + +.... .+..+. .++.+.+ .++|
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~-~~~~~~~-----~~~d 99 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGVGAVETSDD-AARAAAI-----KGAD 99 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCH-HHHHHHH-----hcCC
Confidence 5689999997 9999988888888887 88888898887665432 2 33211 112211 1122222 2589
Q ss_pred EEEEcccChH
Q 018529 242 RSVECTGNID 251 (354)
Q Consensus 242 vv~d~~g~~~ 251 (354)
+||.+++...
T Consensus 100 iVi~at~~g~ 109 (194)
T cd01078 100 VVFAAGAAGV 109 (194)
T ss_pred EEEECCCCCc
Confidence 9999887643
No 262
>PRK09291 short chain dehydrogenase; Provisional
Probab=96.29 E-value=0.03 Score=48.51 Aligned_cols=74 Identities=14% Similarity=0.139 Sum_probs=49.7
Q ss_pred CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCce-E--EcCCCCChhHHHHHHHHcCCCcc
Q 018529 170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-F--VNTSEHDRPIQEVIAEMTNGGVD 241 (354)
Q Consensus 170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~-v--~~~~~~~~~~~~~i~~~~~~~~d 241 (354)
+.++||+|+ |.+|...++.+...|+ +|+++.++.++.+.+++ .+... + .|..+. +.+.+...+++|
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~~~~~~id 75 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDA-----IDRAQAAEWDVD 75 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCH-----HHHHHHhcCCCC
Confidence 457999987 9999999999999999 88888888766554432 23221 1 233221 223333334799
Q ss_pred EEEEcccC
Q 018529 242 RSVECTGN 249 (354)
Q Consensus 242 vv~d~~g~ 249 (354)
++|.++|.
T Consensus 76 ~vi~~ag~ 83 (257)
T PRK09291 76 VLLNNAGI 83 (257)
T ss_pred EEEECCCc
Confidence 99998873
No 263
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=96.28 E-value=0.029 Score=48.74 Aligned_cols=130 Identities=21% Similarity=0.162 Sum_probs=85.1
Q ss_pred hcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCC---------ChhHHHHHHH
Q 018529 164 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH---------DRPIQEVIAE 234 (354)
Q Consensus 164 ~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~---------~~~~~~~i~~ 234 (354)
.++--++.++++.|.|..|+.++..++..|+ .|..-+-...+.+..+++|+...-..+++ +++|.+.-.+
T Consensus 158 Aagtv~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~ 236 (356)
T COG3288 158 AAGTVSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAE 236 (356)
T ss_pred hcccccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHH
Confidence 3445667888999999999999999999999 88888777888888888887533211111 1233332222
Q ss_pred Hc-C--CCccEEEEcccCh-----H-hHHHHHHHhhCCCceEEEEcCCCCCceeecc-hhhh--ccccEEEEEe
Q 018529 235 MT-N--GGVDRSVECTGNI-----D-NMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINV--LNERTLKGTF 296 (354)
Q Consensus 235 ~~-~--~~~dvv~d~~g~~-----~-~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~-~~~~--~~~~~i~g~~ 296 (354)
+. . .++|+||.+.=.| . ..+.....++++ +.+|.+....++ ....+ +-.. .+.+++.|..
T Consensus 237 ~~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpG-SViVDlAa~~GG-Nce~t~pg~~v~~~gV~iig~~ 308 (356)
T COG3288 237 LVAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPG-SVIVDLAAETGG-NCELTEPGKVVTKNGVKIIGYT 308 (356)
T ss_pred HHHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCC-cEEEEehhhcCC-CcccccCCeEEEeCCeEEEeec
Confidence 22 2 2799999875322 2 356788899997 999988765433 22222 1122 2677888854
No 264
>PRK08703 short chain dehydrogenase; Provisional
Probab=96.28 E-value=0.043 Score=47.04 Aligned_cols=80 Identities=28% Similarity=0.375 Sum_probs=51.9
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH----hcCC-c---eEEcCCCCC----hhHHHHHHHH
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGV-T---DFVNTSEHD----RPIQEVIAEM 235 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~----~lg~-~---~v~~~~~~~----~~~~~~i~~~ 235 (354)
++.+++|+|+ |.+|...++.+...|+ +|+++++++++.+.+. +.+. . ...|..+.+ ..+.+.+.+.
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 4578999987 9999999988888899 8999999887665432 2221 1 113332211 1233344444
Q ss_pred cCCCccEEEEcccC
Q 018529 236 TNGGVDRSVECTGN 249 (354)
Q Consensus 236 ~~~~~dvv~d~~g~ 249 (354)
..+.+|+++.++|.
T Consensus 84 ~~~~id~vi~~ag~ 97 (239)
T PRK08703 84 TQGKLDGIVHCAGY 97 (239)
T ss_pred hCCCCCEEEEeccc
Confidence 33478999999884
No 265
>PRK05866 short chain dehydrogenase; Provisional
Probab=96.27 E-value=0.032 Score=49.58 Aligned_cols=79 Identities=24% Similarity=0.393 Sum_probs=51.1
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCce-E--EcCCCCChhHHHHHHHHc--CC
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-F--VNTSEHDRPIQEVIAEMT--NG 238 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~-v--~~~~~~~~~~~~~i~~~~--~~ 238 (354)
.+.++||+|+ |++|...++.+...|+ +|++++++.++.+.+.+ .+... . .|..+. ..+.+.++... .+
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~-~~v~~~~~~~~~~~g 116 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDL-DAVDALVADVEKRIG 116 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCH-HHHHHHHHHHHHHcC
Confidence 3578999987 9999998888888898 89999998877654422 33321 2 222222 12323333221 23
Q ss_pred CccEEEEcccC
Q 018529 239 GVDRSVECTGN 249 (354)
Q Consensus 239 ~~dvv~d~~g~ 249 (354)
++|++++++|.
T Consensus 117 ~id~li~~AG~ 127 (293)
T PRK05866 117 GVDILINNAGR 127 (293)
T ss_pred CCCEEEECCCC
Confidence 78999999874
No 266
>PRK06484 short chain dehydrogenase; Validated
Probab=96.26 E-value=0.072 Score=51.51 Aligned_cols=80 Identities=23% Similarity=0.355 Sum_probs=54.1
Q ss_pred CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCce---EEcCCCCChhHHHHHHHHcC--CCc
Q 018529 168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD---FVNTSEHDRPIQEVIAEMTN--GGV 240 (354)
Q Consensus 168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~~---v~~~~~~~~~~~~~i~~~~~--~~~ 240 (354)
..++++||+|+ +++|...++.+...|+ +|+.+++++++.+.+.+ ++... ..|..+.+ .+.+.+.+... +.+
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g~i 344 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITDEA-AVESAFAQIQARWGRL 344 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHH-HHHHHHHHHHHHcCCC
Confidence 45789999987 9999999998888999 89999998887766544 44332 12333321 23333333221 469
Q ss_pred cEEEEcccC
Q 018529 241 DRSVECTGN 249 (354)
Q Consensus 241 dvv~d~~g~ 249 (354)
|++++++|.
T Consensus 345 d~li~nAg~ 353 (520)
T PRK06484 345 DVLVNNAGI 353 (520)
T ss_pred CEEEECCCC
Confidence 999998874
No 267
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=96.25 E-value=0.047 Score=48.93 Aligned_cols=91 Identities=26% Similarity=0.428 Sum_probs=60.6
Q ss_pred CeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccC
Q 018529 171 SSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN 249 (354)
Q Consensus 171 ~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~ 249 (354)
.+|.|+|+|.+|...+..++..|. ..|+++++++++.+.+++.|...... . + ..+.+ ..+|+|+.|++.
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~-~--~--~~~~~-----~~aDvViiavp~ 76 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT-T--S--AAEAV-----KGADLVILCVPV 76 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec-C--C--HHHHh-----cCCCEEEECCCH
Confidence 579999999999998888888874 37999999999998888887532111 1 1 21212 258999999976
Q ss_pred hHh---HHHHHHHhhCCCceEEEEcC
Q 018529 250 IDN---MISAFECVHDGWGVAVLVGV 272 (354)
Q Consensus 250 ~~~---~~~~~~~l~~~~g~~v~~g~ 272 (354)
... ++.....++++ ..++.++.
T Consensus 77 ~~~~~v~~~l~~~l~~~-~iv~dvgs 101 (307)
T PRK07502 77 GASGAVAAEIAPHLKPG-AIVTDVGS 101 (307)
T ss_pred HHHHHHHHHHHhhCCCC-CEEEeCcc
Confidence 322 23333445554 55555544
No 268
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.24 E-value=0.05 Score=47.66 Aligned_cols=95 Identities=20% Similarity=0.250 Sum_probs=65.0
Q ss_pred hcccchhhhhhhhhhhcC-CCCCCeEEEEcCCh-hHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCCh
Q 018529 149 ILSCGVSTGLGATLNVAK-PERGSSVAVFGLGA-VGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 226 (354)
Q Consensus 149 ~l~~~~~~a~~~l~~~~~-~~~~~~vlI~G~g~-~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~ 226 (354)
.+||+....+.. .+..+ --.|.+++|+|.|. +|.-.+.++...|+ .|+.+.+...
T Consensus 137 ~~PcTp~ai~~l-l~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t~--------------------- 193 (286)
T PRK14175 137 FVPCTPLGIMEI-LKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRSK--------------------- 193 (286)
T ss_pred CCCCcHHHHHHH-HHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCch---------------------
Confidence 456554444443 34444 34789999999865 99999999999999 8887754321
Q ss_pred hHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCC
Q 018529 227 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 274 (354)
Q Consensus 227 ~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~ 274 (354)
++.+.++ .+|+||.++|.+..+.. +.++++ ..++.+|...
T Consensus 194 ~l~~~~~-----~ADIVIsAvg~p~~i~~--~~vk~g-avVIDvGi~~ 233 (286)
T PRK14175 194 DMASYLK-----DADVIVSAVGKPGLVTK--DVVKEG-AVIIDVGNTP 233 (286)
T ss_pred hHHHHHh-----hCCEEEECCCCCcccCH--HHcCCC-cEEEEcCCCc
Confidence 1323232 37999999999766655 357886 7788887654
No 269
>PRK08263 short chain dehydrogenase; Provisional
Probab=96.23 E-value=0.069 Score=46.90 Aligned_cols=78 Identities=17% Similarity=0.250 Sum_probs=50.0
Q ss_pred CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCc-eEE--cCCCCChhHHHHHHHHc--CCCccE
Q 018529 170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVT-DFV--NTSEHDRPIQEVIAEMT--NGGVDR 242 (354)
Q Consensus 170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~-~v~--~~~~~~~~~~~~i~~~~--~~~~dv 242 (354)
+.++||+|+ |.+|...++.+...|. +|+.++++.++.+.+.+ ++.. ..+ |..+. ..+.+.+.... .+++|+
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~~d~ 80 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTDR-AAVFAAVETAVEHFGRLDI 80 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCCH-HHHHHHHHHHHHHcCCCCE
Confidence 468999987 9999998888888898 89999898877665543 2221 122 22221 12222222221 137899
Q ss_pred EEEcccC
Q 018529 243 SVECTGN 249 (354)
Q Consensus 243 v~d~~g~ 249 (354)
++.++|.
T Consensus 81 vi~~ag~ 87 (275)
T PRK08263 81 VVNNAGY 87 (275)
T ss_pred EEECCCC
Confidence 9999874
No 270
>TIGR00138 gidB 16S rRNA methyltransferase GidB. GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.
Probab=96.23 E-value=0.035 Score=45.50 Aligned_cols=94 Identities=13% Similarity=0.137 Sum_probs=59.0
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH----hcCCceEEcCCCCChhHHHHHHHHcCCCccEEE
Q 018529 169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV 244 (354)
Q Consensus 169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~----~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~ 244 (354)
++++||=+|+|. |.+++.+++.....+|++++.+++..+.++ +.+.+.+- +...+ ..+ + ...+.+|+|+
T Consensus 42 ~~~~vLDiGcGt-G~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~-~i~~d--~~~-~--~~~~~fD~I~ 114 (181)
T TIGR00138 42 DGKKVIDIGSGA-GFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNVE-IVNGR--AED-F--QHEEQFDVIT 114 (181)
T ss_pred CCCeEEEecCCC-CccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCeE-EEecc--hhh-c--cccCCccEEE
Confidence 378898889864 666666666554348999999998766554 35554321 11211 211 1 1124799998
Q ss_pred Ecc-c-ChHhHHHHHHHhhCCCceEEEE
Q 018529 245 ECT-G-NIDNMISAFECVHDGWGVAVLV 270 (354)
Q Consensus 245 d~~-g-~~~~~~~~~~~l~~~~g~~v~~ 270 (354)
... . -+..++.+.+.|+++ |++++.
T Consensus 115 s~~~~~~~~~~~~~~~~Lkpg-G~lvi~ 141 (181)
T TIGR00138 115 SRALASLNVLLELTLNLLKVG-GYFLAY 141 (181)
T ss_pred ehhhhCHHHHHHHHHHhcCCC-CEEEEE
Confidence 643 2 234566778889997 998866
No 271
>PRK07454 short chain dehydrogenase; Provisional
Probab=96.23 E-value=0.042 Score=47.10 Aligned_cols=79 Identities=25% Similarity=0.236 Sum_probs=51.2
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCce-EE--cCCCCChhHHHHHHHHcC--C
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FV--NTSEHDRPIQEVIAEMTN--G 238 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~-v~--~~~~~~~~~~~~i~~~~~--~ 238 (354)
.++++||+|+ |.+|...+..+...|. +|+++++++++.+.+.+ .+... .+ |..+. ..+.+.++.... +
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~ 82 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSNP-EAIAPGIAELLEQFG 82 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCH-HHHHHHHHHHHHHcC
Confidence 4578999987 9999999999988999 89999998876554422 23221 22 22221 123333333221 3
Q ss_pred CccEEEEcccC
Q 018529 239 GVDRSVECTGN 249 (354)
Q Consensus 239 ~~dvv~d~~g~ 249 (354)
+.|+++.++|.
T Consensus 83 ~id~lv~~ag~ 93 (241)
T PRK07454 83 CPDVLINNAGM 93 (241)
T ss_pred CCCEEEECCCc
Confidence 68999999874
No 272
>PRK07832 short chain dehydrogenase; Provisional
Probab=96.22 E-value=0.068 Score=46.85 Aligned_cols=76 Identities=22% Similarity=0.342 Sum_probs=48.3
Q ss_pred eEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce----EEcCCCCChhHHHHHHHHc--CCCc
Q 018529 172 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD----FVNTSEHDRPIQEVIAEMT--NGGV 240 (354)
Q Consensus 172 ~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~----v~~~~~~~~~~~~~i~~~~--~~~~ 240 (354)
+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+ +..+... ..|..+.+ .+.+.+.+.. .+++
T Consensus 2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~i 79 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYD-AVAAFAADIHAAHGSM 79 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHH-HHHHHHHHHHHhcCCC
Confidence 6899987 9999999998888999 788888887665433 2234321 13333321 1222222221 1368
Q ss_pred cEEEEcccC
Q 018529 241 DRSVECTGN 249 (354)
Q Consensus 241 dvv~d~~g~ 249 (354)
|++++++|.
T Consensus 80 d~lv~~ag~ 88 (272)
T PRK07832 80 DVVMNIAGI 88 (272)
T ss_pred CEEEECCCC
Confidence 999999874
No 273
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.22 E-value=0.039 Score=48.45 Aligned_cols=79 Identities=14% Similarity=0.231 Sum_probs=49.3
Q ss_pred CCCeEEEEcC-C--hhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCceE--EcCCCCChhHHHHHHHHcC--
Q 018529 169 RGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF--VNTSEHDRPIQEVIAEMTN-- 237 (354)
Q Consensus 169 ~~~~vlI~G~-g--~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~v--~~~~~~~~~~~~~i~~~~~-- 237 (354)
+++++||+|+ + ++|.+.++.+...|+ +|+.+.++++..+.+ +++|.... .|..+.+ ++.+.+.+...
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~-~v~~~~~~~~~~~ 83 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIA-SVDAVFEALEKKW 83 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHH-HHHHHHHHHHHHh
Confidence 5788999987 4 899998888888999 888887765432222 33454322 2333321 23333333221
Q ss_pred CCccEEEEcccC
Q 018529 238 GGVDRSVECTGN 249 (354)
Q Consensus 238 ~~~dvv~d~~g~ 249 (354)
+.+|++++++|.
T Consensus 84 g~iD~lVnnAG~ 95 (271)
T PRK06505 84 GKLDFVVHAIGF 95 (271)
T ss_pred CCCCEEEECCcc
Confidence 479999999873
No 274
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.21 E-value=0.037 Score=47.97 Aligned_cols=79 Identities=22% Similarity=0.281 Sum_probs=48.7
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcC-ChhhHHHHHhcCCceE-EcCCCCChhHHHHHHHHc--CCCccEE
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMT--NGGVDRS 243 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~-~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~i~~~~--~~~~dvv 243 (354)
.+.+++|+|+ |++|...++.+...|+ +|+.+.+ +++..+.+++.+...+ .|..+.+ .+.+.+.+.. .+++|++
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~id~l 83 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGNRD-QVKKSKEVVEKEFGRVDVL 83 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCCHH-HHHHHHHHHHHHcCCCCEE
Confidence 4678999987 9999999988888899 6666544 4444444444443222 2333321 2333333322 1378999
Q ss_pred EEcccC
Q 018529 244 VECTGN 249 (354)
Q Consensus 244 ~d~~g~ 249 (354)
+.++|.
T Consensus 84 i~~ag~ 89 (255)
T PRK06463 84 VNNAGI 89 (255)
T ss_pred EECCCc
Confidence 998874
No 275
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.20 E-value=0.032 Score=48.11 Aligned_cols=79 Identities=24% Similarity=0.304 Sum_probs=50.4
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcC--Cc-eEE--cCCCCChhHHHHHHHH--cCCC
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFG--VT-DFV--NTSEHDRPIQEVIAEM--TNGG 239 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg--~~-~v~--~~~~~~~~~~~~i~~~--~~~~ 239 (354)
++.++||+|+ |.+|...++.+...|. +|+++++++++.+.+ ..+. .. ..+ |..+. ..+...+.+. ..+.
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~ 81 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDE-ADVEAAVAAALERFGS 81 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCH-HHHHHHHHHHHHHhCC
Confidence 4578999997 9999998888888899 799999998776544 2222 21 122 22221 1222222222 1136
Q ss_pred ccEEEEcccC
Q 018529 240 VDRSVECTGN 249 (354)
Q Consensus 240 ~dvv~d~~g~ 249 (354)
+|+||.++|.
T Consensus 82 ~d~vi~~ag~ 91 (251)
T PRK07231 82 VDILVNNAGT 91 (251)
T ss_pred CCEEEECCCC
Confidence 8999998874
No 276
>PRK06483 dihydromonapterin reductase; Provisional
Probab=96.20 E-value=0.045 Score=46.79 Aligned_cols=78 Identities=18% Similarity=0.243 Sum_probs=50.2
Q ss_pred CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhh-HHHHHhcCCceE-EcCCCCChhHHHHHHHHcC--CCccEEE
Q 018529 170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-FEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTN--GGVDRSV 244 (354)
Q Consensus 170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~-~~~~~~lg~~~v-~~~~~~~~~~~~~i~~~~~--~~~dvv~ 244 (354)
++++||+|+ |.+|...++.+...|+ +|+.++++++. .+.+++.++..+ .|..+.+ ++.+.+.+... +++|+++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~lv 79 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADFSTNA-GIMAFIDELKQHTDGLRAII 79 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCCCCHH-HHHHHHHHHHhhCCCccEEE
Confidence 468999987 9999999998888899 88888887643 334445554322 2333221 23333333322 3689999
Q ss_pred EcccC
Q 018529 245 ECTGN 249 (354)
Q Consensus 245 d~~g~ 249 (354)
+++|.
T Consensus 80 ~~ag~ 84 (236)
T PRK06483 80 HNASD 84 (236)
T ss_pred ECCcc
Confidence 98874
No 277
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=96.19 E-value=0.11 Score=45.76 Aligned_cols=101 Identities=25% Similarity=0.356 Sum_probs=63.8
Q ss_pred CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHcCCCcc
Q 018529 166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGGVD 241 (354)
Q Consensus 166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~~~~d 241 (354)
.+++|.+||=+|+|+ |.++|..+| +|+.+|+++|.++-..+-+++ -++.........+ ......++.+|
T Consensus 159 ~~~~g~~vlDvGcGS-GILaIAa~k-LGA~~v~g~DiDp~AV~aa~eNa~~N~v~~~~~~~~~~-----~~~~~~~~~~D 231 (300)
T COG2264 159 LLKKGKTVLDVGCGS-GILAIAAAK-LGAKKVVGVDIDPQAVEAARENARLNGVELLVQAKGFL-----LLEVPENGPFD 231 (300)
T ss_pred hhcCCCEEEEecCCh-hHHHHHHHH-cCCceEEEecCCHHHHHHHHHHHHHcCCchhhhccccc-----chhhcccCccc
Confidence 357999999999864 776665544 577799999999877766654 2333211011110 11112224799
Q ss_pred EEEEcccC---hHhHHHHHHHhhCCCceEEEEcCCC
Q 018529 242 RSVECTGN---IDNMISAFECVHDGWGVAVLVGVPS 274 (354)
Q Consensus 242 vv~d~~g~---~~~~~~~~~~l~~~~g~~v~~g~~~ 274 (354)
+|+-.+=- ..+.......++++ |++++.|...
T Consensus 232 vIVANILA~vl~~La~~~~~~lkpg-g~lIlSGIl~ 266 (300)
T COG2264 232 VIVANILAEVLVELAPDIKRLLKPG-GRLILSGILE 266 (300)
T ss_pred EEEehhhHHHHHHHHHHHHHHcCCC-ceEEEEeehH
Confidence 99865422 13455677789997 9999998664
No 278
>PRK06500 short chain dehydrogenase; Provisional
Probab=96.19 E-value=0.036 Score=47.72 Aligned_cols=79 Identities=22% Similarity=0.368 Sum_probs=51.5
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCce-EE--cCCCCC--hhHHHHHHHHcCCCcc
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD-FV--NTSEHD--RPIQEVIAEMTNGGVD 241 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~~-v~--~~~~~~--~~~~~~i~~~~~~~~d 241 (354)
++.+++|+|+ |.+|...++.+...|+ +|+++++++++.+.+ ++++... .+ |..+.. ..+.+.+.+. .+++|
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id 82 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEA-FGRLD 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHH-hCCCC
Confidence 4678999987 9999999999999999 899998887765543 4455432 11 222211 1122222222 13689
Q ss_pred EEEEcccC
Q 018529 242 RSVECTGN 249 (354)
Q Consensus 242 vv~d~~g~ 249 (354)
+++.++|.
T Consensus 83 ~vi~~ag~ 90 (249)
T PRK06500 83 AVFINAGV 90 (249)
T ss_pred EEEECCCC
Confidence 99998874
No 279
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=96.18 E-value=0.081 Score=44.56 Aligned_cols=101 Identities=22% Similarity=0.249 Sum_probs=64.4
Q ss_pred hhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHcC
Q 018529 162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN 237 (354)
Q Consensus 162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~ 237 (354)
.....++++++||-+|+|. |..+..+++.. . +|++++.+++..+.+++ ++...+- ....+ ..+.+. ..
T Consensus 71 ~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v~-~~~~d--~~~~~~--~~ 142 (212)
T PRK00312 71 TELLELKPGDRVLEIGTGS-GYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNVS-VRHGD--GWKGWP--AY 142 (212)
T ss_pred HHhcCCCCCCEEEEECCCc-cHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCceE-EEECC--cccCCC--cC
Confidence 4567788999999998864 55666666654 3 89999999887666543 4543321 11111 111110 11
Q ss_pred CCccEEEEcccChHhHHHHHHHhhCCCceEEEEc
Q 018529 238 GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVG 271 (354)
Q Consensus 238 ~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g 271 (354)
+.||+|+.............+.|+++ |++++.-
T Consensus 143 ~~fD~I~~~~~~~~~~~~l~~~L~~g-G~lv~~~ 175 (212)
T PRK00312 143 APFDRILVTAAAPEIPRALLEQLKEG-GILVAPV 175 (212)
T ss_pred CCcCEEEEccCchhhhHHHHHhcCCC-cEEEEEE
Confidence 37999987655556677888999997 9877543
No 280
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.17 E-value=0.035 Score=44.09 Aligned_cols=74 Identities=23% Similarity=0.321 Sum_probs=50.3
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHH-HHhcCCce-EEcCCCCChhHHHHHHHHcCCCccEEEE
Q 018529 168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVE 245 (354)
Q Consensus 168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~-~~~lg~~~-v~~~~~~~~~~~~~i~~~~~~~~dvv~d 245 (354)
..+.+++|+|+|.+|...++.+...|...|++++++.++.+. +++++... .....+ ..+. -+++|+|+.
T Consensus 17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~----~~~~-----~~~~Dvvi~ 87 (155)
T cd01065 17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLD----LEEL-----LAEADLIIN 87 (155)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecc----hhhc-----cccCCEEEe
Confidence 457889999999999999988888864489999998877654 45555421 011111 2111 136899999
Q ss_pred cccCh
Q 018529 246 CTGNI 250 (354)
Q Consensus 246 ~~g~~ 250 (354)
+++..
T Consensus 88 ~~~~~ 92 (155)
T cd01065 88 TTPVG 92 (155)
T ss_pred CcCCC
Confidence 98763
No 281
>PRK07062 short chain dehydrogenase; Provisional
Probab=96.17 E-value=0.031 Score=48.79 Aligned_cols=79 Identities=27% Similarity=0.354 Sum_probs=51.2
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-----cCCceE----EcCCCCChhHHHHHHHHc--
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVTDF----VNTSEHDRPIQEVIAEMT-- 236 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-----lg~~~v----~~~~~~~~~~~~~i~~~~-- 236 (354)
.++++||+|+ +++|...++.+...|+ +|+.+++++++.+.+.+ .+...+ .|..+.+ .+.+.+.+..
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~ 84 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEA-DVAAFAAAVEAR 84 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHH-HHHHHHHHHHHh
Confidence 4789999987 9999999999888999 89999898876554322 111121 2333322 2222233322
Q ss_pred CCCccEEEEcccC
Q 018529 237 NGGVDRSVECTGN 249 (354)
Q Consensus 237 ~~~~dvv~d~~g~ 249 (354)
.+++|++++++|.
T Consensus 85 ~g~id~li~~Ag~ 97 (265)
T PRK07062 85 FGGVDMLVNNAGQ 97 (265)
T ss_pred cCCCCEEEECCCC
Confidence 1479999999874
No 282
>PRK07024 short chain dehydrogenase; Provisional
Probab=96.17 E-value=0.039 Score=47.92 Aligned_cols=78 Identities=17% Similarity=0.179 Sum_probs=50.1
Q ss_pred CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCC--c-eE--EcCCCCChhHHHHHHHHcC--CCc
Q 018529 170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGV--T-DF--VNTSEHDRPIQEVIAEMTN--GGV 240 (354)
Q Consensus 170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~--~-~v--~~~~~~~~~~~~~i~~~~~--~~~ 240 (354)
+.++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+.+ +.. . .. .|..+. ..+.+.+.+... +.+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~i~~~~~~~~~~~g~i 79 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRDA-DALAAAAADFIAAHGLP 79 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCH-HHHHHHHHHHHHhCCCC
Confidence 468999987 9999998888888899 89999888877665432 221 1 11 233222 223333333221 358
Q ss_pred cEEEEcccC
Q 018529 241 DRSVECTGN 249 (354)
Q Consensus 241 dvv~d~~g~ 249 (354)
|++++++|.
T Consensus 80 d~lv~~ag~ 88 (257)
T PRK07024 80 DVVIANAGI 88 (257)
T ss_pred CEEEECCCc
Confidence 999998873
No 283
>PRK08618 ornithine cyclodeaminase; Validated
Probab=96.15 E-value=0.083 Score=47.72 Aligned_cols=94 Identities=17% Similarity=0.182 Sum_probs=64.0
Q ss_pred CCCCeEEEEcCChhHHHHHHHH-HHcCCcEEEEEcCChhhHHHHH-h----cCCceEEcCCCCChhHHHHHHHHcCCCcc
Q 018529 168 ERGSSVAVFGLGAVGLAAAEGA-RIAGASRIIGVDRSSKRFEEAK-K----FGVTDFVNTSEHDRPIQEVIAEMTNGGVD 241 (354)
Q Consensus 168 ~~~~~vlI~G~g~~G~~a~~~a-~~~g~~~vi~v~~~~~~~~~~~-~----lg~~~v~~~~~~~~~~~~~i~~~~~~~~d 241 (354)
+...+++|+|+|..|...+..+ ...+.+.|.+.++++++.+.+. + ++.. +..+.+ +.+.+ ...|
T Consensus 125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~~----~~~~~-----~~aD 194 (325)
T PRK08618 125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVNS----ADEAI-----EEAD 194 (325)
T ss_pred CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeCC----HHHHH-----hcCC
Confidence 4567899999999998776554 4568889999999988866443 2 3443 222222 33333 2489
Q ss_pred EEEEcccChHhHHHHHHHhhCCCceEEEEcCCC
Q 018529 242 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 274 (354)
Q Consensus 242 vv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~ 274 (354)
+|+.|+++...+- . ..++++ -.+..+|...
T Consensus 195 iVi~aT~s~~p~i-~-~~l~~G-~hV~~iGs~~ 224 (325)
T PRK08618 195 IIVTVTNAKTPVF-S-EKLKKG-VHINAVGSFM 224 (325)
T ss_pred EEEEccCCCCcch-H-HhcCCC-cEEEecCCCC
Confidence 9999998754333 3 788886 7888888654
No 284
>PRK07890 short chain dehydrogenase; Provisional
Probab=96.15 E-value=0.041 Score=47.70 Aligned_cols=80 Identities=24% Similarity=0.304 Sum_probs=51.4
Q ss_pred CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCc---eEEcCCCCChhHHHHHHHHcC--
Q 018529 168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT---DFVNTSEHDRPIQEVIAEMTN-- 237 (354)
Q Consensus 168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~---~v~~~~~~~~~~~~~i~~~~~-- 237 (354)
-++.++||+|+ |.+|...+..+...|+ +|+.+++++++.+.+.+ .+.. ...|..+. ..+...+.+...
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~ 80 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDE-DQCANLVALALERF 80 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCH-HHHHHHHHHHHHHc
Confidence 35688999987 9999999998889999 89999888876554422 2322 12233222 123222322211
Q ss_pred CCccEEEEcccC
Q 018529 238 GGVDRSVECTGN 249 (354)
Q Consensus 238 ~~~dvv~d~~g~ 249 (354)
+.+|+++.++|.
T Consensus 81 g~~d~vi~~ag~ 92 (258)
T PRK07890 81 GRVDALVNNAFR 92 (258)
T ss_pred CCccEEEECCcc
Confidence 368999998874
No 285
>PRK08317 hypothetical protein; Provisional
Probab=96.14 E-value=0.064 Score=45.84 Aligned_cols=101 Identities=25% Similarity=0.384 Sum_probs=68.5
Q ss_pred hhhcCCCCCCeEEEEcCChhHHHHHHHHHHcC-CcEEEEEcCChhhHHHHHhc----CCc-eEEcCCCCChhHHHHHHHH
Q 018529 162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKF----GVT-DFVNTSEHDRPIQEVIAEM 235 (354)
Q Consensus 162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g-~~~vi~v~~~~~~~~~~~~l----g~~-~v~~~~~~~~~~~~~i~~~ 235 (354)
.+...++++++||-+|+|. |..+..++...+ ..++++++.+++..+.+++. +.. .++..+... + .+
T Consensus 12 ~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~--~-----~~ 83 (241)
T PRK08317 12 FELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADG--L-----PF 83 (241)
T ss_pred HHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEeccccc--C-----CC
Confidence 4567889999999999976 888889998874 23899999999988887664 111 111111110 0 02
Q ss_pred cCCCccEEEEcc-----c-ChHhHHHHHHHhhCCCceEEEEc
Q 018529 236 TNGGVDRSVECT-----G-NIDNMISAFECVHDGWGVAVLVG 271 (354)
Q Consensus 236 ~~~~~dvv~d~~-----g-~~~~~~~~~~~l~~~~g~~v~~g 271 (354)
..+.+|+|+... . ....+..+.++|+++ |.+++..
T Consensus 84 ~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~ 124 (241)
T PRK08317 84 PDGSFDAVRSDRVLQHLEDPARALAEIARVLRPG-GRVVVLD 124 (241)
T ss_pred CCCCceEEEEechhhccCCHHHHHHHHHHHhcCC-cEEEEEe
Confidence 224789887532 1 234778899999997 9988765
No 286
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=96.14 E-value=0.14 Score=44.63 Aligned_cols=103 Identities=17% Similarity=0.213 Sum_probs=59.8
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh-------------------hh----HHHHHhcCCc-eEEcCCCC
Q 018529 169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-------------------KR----FEEAKKFGVT-DFVNTSEH 224 (354)
Q Consensus 169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~-------------------~~----~~~~~~lg~~-~v~~~~~~ 224 (354)
.+.+|+|+|+|++|..++..+-..|.++++.+|.+. .| .+++++++.+ .+..+.+.
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~ 108 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDF 108 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEecc
Confidence 457899999999999999999999988999887552 01 2223334432 22222211
Q ss_pred ChhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCC
Q 018529 225 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP 273 (354)
Q Consensus 225 ~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~ 273 (354)
- -.+.+.++....+|+|+||+.....-..+.+......-.++..+..
T Consensus 109 i--~~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gGa 155 (268)
T PRK15116 109 I--TPDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGA 155 (268)
T ss_pred c--ChhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECCc
Confidence 0 0122333333369999999987544333444333331445555443
No 287
>PLN02823 spermine synthase
Probab=96.12 E-value=0.058 Score=48.69 Aligned_cols=100 Identities=13% Similarity=0.119 Sum_probs=63.3
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCC-c-eEEcCCCC---ChhHHHHHHHHcCCCccEE
Q 018529 169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV-T-DFVNTSEH---DRPIQEVIAEMTNGGVDRS 243 (354)
Q Consensus 169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~-~-~v~~~~~~---~~~~~~~i~~~~~~~~dvv 243 (354)
..++|||+|+|. |.++..+++..+..+|++++.+++-.+.++++-. . ..+....- -.|..+.+++ ..+.+|+|
T Consensus 103 ~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~Da~~~L~~-~~~~yDvI 180 (336)
T PLN02823 103 NPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIINDARAELEK-RDEKFDVI 180 (336)
T ss_pred CCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEChhHHHHhh-CCCCccEE
Confidence 457899998864 5666777787776799999999999999987421 1 01110000 0124444533 33489999
Q ss_pred E-Eccc-----------ChHhHH-HHHHHhhCCCceEEEEc
Q 018529 244 V-ECTG-----------NIDNMI-SAFECVHDGWGVAVLVG 271 (354)
Q Consensus 244 ~-d~~g-----------~~~~~~-~~~~~l~~~~g~~v~~g 271 (354)
| |... +.+.++ .+.+.|+++ |.++.-.
T Consensus 181 i~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~-Gvlv~q~ 220 (336)
T PLN02823 181 IGDLADPVEGGPCYQLYTKSFYERIVKPKLNPG-GIFVTQA 220 (336)
T ss_pred EecCCCccccCcchhhccHHHHHHHHHHhcCCC-cEEEEec
Confidence 7 4321 124566 788899998 9887543
No 288
>PRK08589 short chain dehydrogenase; Validated
Probab=96.10 E-value=0.037 Score=48.55 Aligned_cols=79 Identities=23% Similarity=0.309 Sum_probs=49.5
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh---cCCc-e--EEcCCCCChhHHHHHHHHc--CCC
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK---FGVT-D--FVNTSEHDRPIQEVIAEMT--NGG 239 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~---lg~~-~--v~~~~~~~~~~~~~i~~~~--~~~ 239 (354)
+++++||+|+ +++|...++.+...|+ +|+.++++++..+.+.+ .+.. . ..|..+.+ .+.+.+.+.. .++
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~g~ 82 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQ-QVKDFASEIKEQFGR 82 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHH-HHHHHHHHHHHHcCC
Confidence 4679999987 9999998888888899 88888888433333333 2321 1 23333321 2223333322 136
Q ss_pred ccEEEEcccC
Q 018529 240 VDRSVECTGN 249 (354)
Q Consensus 240 ~dvv~d~~g~ 249 (354)
.|++++++|.
T Consensus 83 id~li~~Ag~ 92 (272)
T PRK08589 83 VDVLFNNAGV 92 (272)
T ss_pred cCEEEECCCC
Confidence 8999998874
No 289
>PRK06482 short chain dehydrogenase; Provisional
Probab=96.10 E-value=0.04 Score=48.41 Aligned_cols=77 Identities=17% Similarity=0.240 Sum_probs=50.4
Q ss_pred CeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhc-CCc-e--EEcCCCCChhHHHHHHHHc--CCCccEE
Q 018529 171 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GVT-D--FVNTSEHDRPIQEVIAEMT--NGGVDRS 243 (354)
Q Consensus 171 ~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~l-g~~-~--v~~~~~~~~~~~~~i~~~~--~~~~dvv 243 (354)
.++||+|+ |.+|...++.+...|. +|+++.+++++.+.+++. +.. . ..|..+.+ .+.+.+.+.. .+++|++
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~v 80 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTDSA-AVRAVVDRAFAALGRIDVV 80 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCCHH-HHHHHHHHHHHHcCCCCEE
Confidence 57999987 9999998888888898 899998988877665442 221 1 12333221 2333333321 1368999
Q ss_pred EEcccC
Q 018529 244 VECTGN 249 (354)
Q Consensus 244 ~d~~g~ 249 (354)
|.++|.
T Consensus 81 i~~ag~ 86 (276)
T PRK06482 81 VSNAGY 86 (276)
T ss_pred EECCCC
Confidence 998874
No 290
>PRK07677 short chain dehydrogenase; Provisional
Probab=96.10 E-value=0.045 Score=47.32 Aligned_cols=78 Identities=22% Similarity=0.308 Sum_probs=49.9
Q ss_pred CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCc-eEE--cCCCCChhHHHHHHHHc--CCC
Q 018529 170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFV--NTSEHDRPIQEVIAEMT--NGG 239 (354)
Q Consensus 170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~-~v~--~~~~~~~~~~~~i~~~~--~~~ 239 (354)
++++||+|+ |++|...++.+...|+ +|++++++.++.+.+.+ .+.. ..+ |..+. ..+.+.+.+.. .++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~ 78 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNP-EDVQKMVEQIDEKFGR 78 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCH-HHHHHHHHHHHHHhCC
Confidence 468999987 9999999999999999 89999888776554432 2322 222 22221 12222232221 136
Q ss_pred ccEEEEcccC
Q 018529 240 VDRSVECTGN 249 (354)
Q Consensus 240 ~dvv~d~~g~ 249 (354)
+|++++++|.
T Consensus 79 id~lI~~ag~ 88 (252)
T PRK07677 79 IDALINNAAG 88 (252)
T ss_pred ccEEEECCCC
Confidence 8999998873
No 291
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=96.10 E-value=0.1 Score=39.04 Aligned_cols=74 Identities=27% Similarity=0.407 Sum_probs=54.5
Q ss_pred EEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccChH
Q 018529 173 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID 251 (354)
Q Consensus 173 vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~ 251 (354)
|+|.|.|.+|...++.++..+. +|++++.++++.+.+++.|.. ++..+..+ .+.+++..-..++.++-+++...
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~-~i~gd~~~---~~~l~~a~i~~a~~vv~~~~~d~ 74 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVE-VIYGDATD---PEVLERAGIEKADAVVILTDDDE 74 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSE-EEES-TTS---HHHHHHTTGGCESEEEEESSSHH
T ss_pred eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhcccc-cccccchh---hhHHhhcCccccCEEEEccCCHH
Confidence 5788999999999999999665 899999999999999998864 44443333 23345443337899998887743
No 292
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.09 E-value=0.083 Score=45.03 Aligned_cols=99 Identities=20% Similarity=0.234 Sum_probs=57.6
Q ss_pred CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh------h-------------h----HHHHHhcCCceEEcCCCCCh
Q 018529 170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS------K-------------R----FEEAKKFGVTDFVNTSEHDR 226 (354)
Q Consensus 170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~------~-------------~----~~~~~~lg~~~v~~~~~~~~ 226 (354)
..+|+|+|+|++|..++..+-..|..+++.+|.+. . | .+++++++.+.-+...+..
T Consensus 11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~~~- 89 (231)
T cd00755 11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVEEF- 89 (231)
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEeeee-
Confidence 36799999999999999999999999999987543 1 1 1222333332111111111
Q ss_pred hH-HHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEE
Q 018529 227 PI-QEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV 270 (354)
Q Consensus 227 ~~-~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~ 270 (354)
+ .+.+.++....+|+|+||+.+...-..+.+......-.++..
T Consensus 90 -i~~~~~~~l~~~~~D~VvdaiD~~~~k~~L~~~c~~~~ip~I~s 133 (231)
T cd00755 90 -LTPDNSEDLLGGDPDFVVDAIDSIRAKVALIAYCRKRKIPVISS 133 (231)
T ss_pred -cCHhHHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHhCCCEEEE
Confidence 1 122333333469999999987654444444443331334443
No 293
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=96.09 E-value=0.02 Score=50.44 Aligned_cols=74 Identities=23% Similarity=0.313 Sum_probs=50.6
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529 168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 246 (354)
Q Consensus 168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~ 246 (354)
..+.+++|+|+|++|.+++..+...|..+|+++.|+.++.+.+. +++....+.. +.+ ..+.+ ..+|+|++|
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~~--~~~~~-----~~~DivIna 192 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DLE--LQEEL-----ADFDLIINA 192 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-ccc--chhcc-----ccCCEEEEC
Confidence 45678999999999999999999999669999999988876553 3432110111 000 11111 258999999
Q ss_pred ccC
Q 018529 247 TGN 249 (354)
Q Consensus 247 ~g~ 249 (354)
++.
T Consensus 193 Tp~ 195 (278)
T PRK00258 193 TSA 195 (278)
T ss_pred CcC
Confidence 875
No 294
>PRK07478 short chain dehydrogenase; Provisional
Probab=96.07 E-value=0.042 Score=47.60 Aligned_cols=79 Identities=19% Similarity=0.292 Sum_probs=50.7
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce-EE--cCCCCChhHHHHHHHHc--CC
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMT--NG 238 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v~--~~~~~~~~~~~~i~~~~--~~ 238 (354)
+++++||+|+ |++|...+..+...|+ +|+.+++++++.+.+ ++.+... .+ |..+.+ ...+.+.+.. .+
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~ 82 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEA-YAKALVALAVERFG 82 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHH-HHHHHHHHHHHhcC
Confidence 3678999987 9999999888888999 888888888776543 2234322 22 222221 1222232221 13
Q ss_pred CccEEEEcccC
Q 018529 239 GVDRSVECTGN 249 (354)
Q Consensus 239 ~~dvv~d~~g~ 249 (354)
++|+++.++|.
T Consensus 83 ~id~li~~ag~ 93 (254)
T PRK07478 83 GLDIAFNNAGT 93 (254)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 295
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=96.06 E-value=0.085 Score=45.92 Aligned_cols=99 Identities=22% Similarity=0.230 Sum_probs=66.3
Q ss_pred hhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCc-eEEcCCCCChhHHHHHHHHcCCCc
Q 018529 162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNGGV 240 (354)
Q Consensus 162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~-~v~~~~~~~~~~~~~i~~~~~~~~ 240 (354)
.....++++++||=+|+|. |..+..+++..+..+|++++.+++..+.+++.-.. .++.. + ..+ + ...+.+
T Consensus 24 l~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~---d--~~~-~--~~~~~f 94 (258)
T PRK01683 24 LARVPLENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEA---D--IAS-W--QPPQAL 94 (258)
T ss_pred HhhCCCcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEEC---c--hhc-c--CCCCCc
Confidence 3445678889999999874 67778888876444999999999988888764221 12211 1 111 1 112379
Q ss_pred cEEEEccc------ChHhHHHHHHHhhCCCceEEEE
Q 018529 241 DRSVECTG------NIDNMISAFECVHDGWGVAVLV 270 (354)
Q Consensus 241 dvv~d~~g------~~~~~~~~~~~l~~~~g~~v~~ 270 (354)
|+|+.... ....+..+.+.|+++ |.+++.
T Consensus 95 D~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~~~~~ 129 (258)
T PRK01683 95 DLIFANASLQWLPDHLELFPRLVSLLAPG-GVLAVQ 129 (258)
T ss_pred cEEEEccChhhCCCHHHHHHHHHHhcCCC-cEEEEE
Confidence 99986533 125688889999997 998775
No 296
>PRK07574 formate dehydrogenase; Provisional
Probab=96.06 E-value=0.067 Score=49.25 Aligned_cols=91 Identities=16% Similarity=0.185 Sum_probs=62.3
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529 169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 248 (354)
Q Consensus 169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g 248 (354)
.|.+|.|+|.|.||...++.++.+|. +|++.+++....+..+++|... +.+ +.+.++ ..|+|+.+.+
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g~~~---~~~----l~ell~-----~aDvV~l~lP 257 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELGLTY---HVS----FDSLVS-----VCDVVTIHCP 257 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcCcee---cCC----HHHHhh-----cCCEEEEcCC
Confidence 57789999999999999999999999 9999988764445555555421 111 333222 3689888776
Q ss_pred ChHhH-----HHHHHHhhCCCceEEEEcCC
Q 018529 249 NIDNM-----ISAFECVHDGWGVAVLVGVP 273 (354)
Q Consensus 249 ~~~~~-----~~~~~~l~~~~g~~v~~g~~ 273 (354)
..+.. +..+..|+++ ..+|.++..
T Consensus 258 lt~~T~~li~~~~l~~mk~g-a~lIN~aRG 286 (385)
T PRK07574 258 LHPETEHLFDADVLSRMKRG-SYLVNTARG 286 (385)
T ss_pred CCHHHHHHhCHHHHhcCCCC-cEEEECCCC
Confidence 43322 2456778886 777777654
No 297
>PRK05854 short chain dehydrogenase; Provisional
Probab=96.05 E-value=0.049 Score=48.92 Aligned_cols=79 Identities=20% Similarity=0.223 Sum_probs=49.7
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-Hhc-----CCc-e--EEcCCCCC--hhHHHHHHHHc
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKF-----GVT-D--FVNTSEHD--RPIQEVIAEMT 236 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~l-----g~~-~--v~~~~~~~--~~~~~~i~~~~ 236 (354)
.+++++|+|+ +++|...+..+...|+ +|+.+.++.++.+.+ +++ +.. . ..|..+.+ ..+.+.+.+.
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~- 90 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAE- 90 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHh-
Confidence 4688999987 9999998888888899 888888887765433 222 111 1 12333321 1222233222
Q ss_pred CCCccEEEEcccC
Q 018529 237 NGGVDRSVECTGN 249 (354)
Q Consensus 237 ~~~~dvv~d~~g~ 249 (354)
.+.+|++++++|.
T Consensus 91 ~~~iD~li~nAG~ 103 (313)
T PRK05854 91 GRPIHLLINNAGV 103 (313)
T ss_pred CCCccEEEECCcc
Confidence 2378999998874
No 298
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.05 E-value=0.053 Score=47.20 Aligned_cols=79 Identities=19% Similarity=0.260 Sum_probs=48.1
Q ss_pred CCCeEEEEcCC---hhHHHHHHHHHHcCCcEEEEEcCChhhHHH----HHhcCCceEE--cCCCCChhHHHHHHHHcC--
Q 018529 169 RGSSVAVFGLG---AVGLAAAEGARIAGASRIIGVDRSSKRFEE----AKKFGVTDFV--NTSEHDRPIQEVIAEMTN-- 237 (354)
Q Consensus 169 ~~~~vlI~G~g---~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~----~~~lg~~~v~--~~~~~~~~~~~~i~~~~~-- 237 (354)
+++++||+|++ ++|.+.++.+...|+ +|+.++++++..+. .++++....+ |..+. .+..+.+.+...
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~ 86 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREP-GQLEAVFARIAEEW 86 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCCH-HHHHHHHHHHHHHc
Confidence 47899999863 899998888888899 78888787543322 2334432222 22222 122222322221
Q ss_pred CCccEEEEcccC
Q 018529 238 GGVDRSVECTGN 249 (354)
Q Consensus 238 ~~~dvv~d~~g~ 249 (354)
+.+|++++++|.
T Consensus 87 g~ld~lv~nAg~ 98 (258)
T PRK07533 87 GRLDFLLHSIAF 98 (258)
T ss_pred CCCCEEEEcCcc
Confidence 478999998863
No 299
>PRK08862 short chain dehydrogenase; Provisional
Probab=96.05 E-value=0.044 Score=46.74 Aligned_cols=78 Identities=12% Similarity=0.130 Sum_probs=50.1
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce-E--EcCCCCChhHHHHHHHHcC--C
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMTN--G 238 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~i~~~~~--~ 238 (354)
++++++|+|+ +++|.+.+..+...|+ +|+.+.+++++.+.+ ++.+... . .|..+. ..+.+.+.+... +
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g 81 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQ-ESIRHLFDAIEQQFN 81 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCH-HHHHHHHHHHHHHhC
Confidence 4678999987 8999998888888899 888888888776543 2335332 1 222222 122222222221 3
Q ss_pred -CccEEEEccc
Q 018529 239 -GVDRSVECTG 248 (354)
Q Consensus 239 -~~dvv~d~~g 248 (354)
.+|++++++|
T Consensus 82 ~~iD~li~nag 92 (227)
T PRK08862 82 RAPDVLVNNWT 92 (227)
T ss_pred CCCCEEEECCc
Confidence 6999999986
No 300
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=96.04 E-value=0.13 Score=42.32 Aligned_cols=100 Identities=18% Similarity=0.198 Sum_probs=64.4
Q ss_pred hhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHcC
Q 018529 162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN 237 (354)
Q Consensus 162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~ 237 (354)
.....+.++++||=+|+|. |..++.+++.....+|++++.+++..+.+++ ++...+-.. ..+ ... ...
T Consensus 24 ~~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~-~~d--~~~----~~~ 95 (187)
T PRK08287 24 LSKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDII-PGE--API----ELP 95 (187)
T ss_pred HHhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEE-ecC--chh----hcC
Confidence 3445677888998888864 7777777776543499999999988777654 443322111 111 111 112
Q ss_pred CCccEEEEccc---ChHhHHHHHHHhhCCCceEEEE
Q 018529 238 GGVDRSVECTG---NIDNMISAFECVHDGWGVAVLV 270 (354)
Q Consensus 238 ~~~dvv~d~~g---~~~~~~~~~~~l~~~~g~~v~~ 270 (354)
+.+|+|+.... -...++.+.+.|+++ |++++.
T Consensus 96 ~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~lv~~ 130 (187)
T PRK08287 96 GKADAIFIGGSGGNLTAIIDWSLAHLHPG-GRLVLT 130 (187)
T ss_pred cCCCEEEECCCccCHHHHHHHHHHhcCCC-eEEEEE
Confidence 36999986432 124677888999997 998764
No 301
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=96.04 E-value=0.044 Score=47.48 Aligned_cols=79 Identities=28% Similarity=0.417 Sum_probs=51.1
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce-EE--cCCCCChhHHHHHHHHc--CC
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMT--NG 238 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v~--~~~~~~~~~~~~i~~~~--~~ 238 (354)
.++++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+ ++.|... .+ |..+. ..+.+.+.+.. .+
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~ 86 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDH-DAVRAAIDAFEAEIG 86 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCH-HHHHHHHHHHHHhcC
Confidence 4789999987 9999999998888899 899998887765433 2233321 12 33332 12333333222 23
Q ss_pred CccEEEEcccC
Q 018529 239 GVDRSVECTGN 249 (354)
Q Consensus 239 ~~dvv~d~~g~ 249 (354)
+.|++|.++|.
T Consensus 87 ~~d~li~~ag~ 97 (255)
T PRK07523 87 PIDILVNNAGM 97 (255)
T ss_pred CCCEEEECCCC
Confidence 78999999874
No 302
>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed
Probab=96.03 E-value=0.13 Score=42.95 Aligned_cols=98 Identities=20% Similarity=0.194 Sum_probs=64.7
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHc-CCCccEE
Q 018529 169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT-NGGVDRS 243 (354)
Q Consensus 169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~-~~~~dvv 243 (354)
++.+||-+|+|. |..+..+++.....+|++++.+++..+.+++ .+...+- ....+ +.+.+.... .+.+|.|
T Consensus 40 ~~~~VLDiGcGt-G~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~-~~~~d--~~~~l~~~~~~~~~D~V 115 (202)
T PRK00121 40 DAPIHLEIGFGK-GEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLR-LLCGD--AVEVLLDMFPDGSLDRI 115 (202)
T ss_pred CCCeEEEEccCC-CHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEE-EEecC--HHHHHHHHcCccccceE
Confidence 567888899875 7777788887644489999999998887754 2333221 11122 322333222 3478988
Q ss_pred EEccc--------------ChHhHHHHHHHhhCCCceEEEEc
Q 018529 244 VECTG--------------NIDNMISAFECVHDGWGVAVLVG 271 (354)
Q Consensus 244 ~d~~g--------------~~~~~~~~~~~l~~~~g~~v~~g 271 (354)
+-... ....++.+.+.|+++ |.+++..
T Consensus 116 ~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~l~i~~ 156 (202)
T PRK00121 116 YLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPG-GEIHFAT 156 (202)
T ss_pred EEECCCCCCCccccccccCCHHHHHHHHHHcCCC-CEEEEEc
Confidence 76432 235688899999997 9988763
No 303
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=96.03 E-value=0.086 Score=41.30 Aligned_cols=32 Identities=28% Similarity=0.396 Sum_probs=28.7
Q ss_pred eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529 172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 203 (354)
Q Consensus 172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~ 203 (354)
+|+|+|+|++|...+..+...|.++++.+|.+
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 58999999999999999999999889998755
No 304
>PRK06179 short chain dehydrogenase; Provisional
Probab=96.03 E-value=0.028 Score=49.19 Aligned_cols=76 Identities=26% Similarity=0.379 Sum_probs=49.6
Q ss_pred CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCce-EEcCCCCChhHHHHHHHHc--CCCccEEEE
Q 018529 170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMT--NGGVDRSVE 245 (354)
Q Consensus 170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~i~~~~--~~~~dvv~d 245 (354)
+++++|+|+ |.+|...++.+...|+ +|++++++.++.+... +... ..|..+. ..+.+.++... .+.+|++++
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~--~~~~~~~D~~d~-~~~~~~~~~~~~~~g~~d~li~ 79 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPIP--GVELLELDVTDD-ASVQAAVDEVIARAGRIDVLVN 79 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhccccC--CCeeEEeecCCH-HHHHHHHHHHHHhCCCCCEEEE
Confidence 568999987 9999998888888899 8999988876554322 2222 2233332 22333333332 236899999
Q ss_pred cccC
Q 018529 246 CTGN 249 (354)
Q Consensus 246 ~~g~ 249 (354)
++|.
T Consensus 80 ~ag~ 83 (270)
T PRK06179 80 NAGV 83 (270)
T ss_pred CCCC
Confidence 9884
No 305
>PRK06172 short chain dehydrogenase; Provisional
Probab=96.03 E-value=0.043 Score=47.45 Aligned_cols=79 Identities=22% Similarity=0.338 Sum_probs=50.2
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce-E--EcCCCCChhHHHHHHHHc--CC
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMT--NG 238 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~ 238 (354)
+++++||+|+ |.+|...+..+...|+ +|+.+++++++.+.+ ++.+... . .|..+.+ .+.+.+.+.. .+
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~i~~~~~~~~~~~g 83 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTRDA-EVKALVEQTIAAYG 83 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHHhC
Confidence 4689999987 9999998888888898 899999987764433 3334321 2 2222221 2222222221 14
Q ss_pred CccEEEEcccC
Q 018529 239 GVDRSVECTGN 249 (354)
Q Consensus 239 ~~dvv~d~~g~ 249 (354)
++|+++.+.|.
T Consensus 84 ~id~li~~ag~ 94 (253)
T PRK06172 84 RLDYAFNNAGI 94 (253)
T ss_pred CCCEEEECCCC
Confidence 78999998874
No 306
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=96.02 E-value=0.083 Score=44.51 Aligned_cols=102 Identities=22% Similarity=0.185 Sum_probs=62.7
Q ss_pred CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCceEEc-------CCCCChh-HHHHHHHHc-
Q 018529 167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDFVN-------TSEHDRP-IQEVIAEMT- 236 (354)
Q Consensus 167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~~v~~-------~~~~~~~-~~~~i~~~~- 236 (354)
+.++.+||+.|||. |.-++.+|. .|. .|++++.++...+.+ ++.+...... +...+-. ....+.++.
T Consensus 32 ~~~~~rvLd~GCG~-G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 108 (213)
T TIGR03840 32 LPAGARVFVPLCGK-SLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA 108 (213)
T ss_pred CCCCCeEEEeCCCc-hhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc
Confidence 35778999999975 788888875 698 999999999988875 3333221000 0000000 000010111
Q ss_pred --CCCccEEEEccc--------ChHhHHHHHHHhhCCCceEEEEcC
Q 018529 237 --NGGVDRSVECTG--------NIDNMISAFECVHDGWGVAVLVGV 272 (354)
Q Consensus 237 --~~~~dvv~d~~g--------~~~~~~~~~~~l~~~~g~~v~~g~ 272 (354)
.+.||.|+|+.. ....+..+.+.|+++ |++++...
T Consensus 109 ~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpg-G~~ll~~~ 153 (213)
T TIGR03840 109 ADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPG-ARQLLITL 153 (213)
T ss_pred ccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCC-CeEEEEEE
Confidence 136899999653 124677899999997 98666654
No 307
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=96.02 E-value=0.048 Score=47.39 Aligned_cols=79 Identities=29% Similarity=0.449 Sum_probs=51.2
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH----hcCCce-E--EcCCCCChhHHHHHHHHcC--C
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-F--VNTSEHDRPIQEVIAEMTN--G 238 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~i~~~~~--~ 238 (354)
++.++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+. +.+... . .|..+.+ .+.+.+.+... +
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~-~i~~~~~~~~~~~~ 88 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVADEA-DIERLAEETLERFG 88 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHH-HHHHHHHHHHHHhC
Confidence 4688999987 9999999988888999 8999989887765443 223221 2 2333221 23222222211 3
Q ss_pred CccEEEEcccC
Q 018529 239 GVDRSVECTGN 249 (354)
Q Consensus 239 ~~dvv~d~~g~ 249 (354)
++|.++.++|.
T Consensus 89 ~id~vi~~ag~ 99 (259)
T PRK08213 89 HVDILVNNAGA 99 (259)
T ss_pred CCCEEEECCCC
Confidence 68999999874
No 308
>PRK08264 short chain dehydrogenase; Validated
Probab=96.02 E-value=0.045 Score=46.80 Aligned_cols=75 Identities=19% Similarity=0.275 Sum_probs=49.0
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCc-eE--EcCCCCChhHHHHHHHHcCCCccEEE
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DF--VNTSEHDRPIQEVIAEMTNGGVDRSV 244 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~-~v--~~~~~~~~~~~~~i~~~~~~~~dvv~ 244 (354)
.+.++||+|+ |.+|...++.+...|.++|++++++.++.+. .+.. .+ .|..+. ..+.+.++.. +.+|+||
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~-~~~~~~~~~~--~~id~vi 78 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTDP-ASVAAAAEAA--SDVTILV 78 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCCH-HHHHHHHHhc--CCCCEEE
Confidence 4678999987 9999999999988998678888888766543 2221 12 222221 1233323222 3589999
Q ss_pred EcccC
Q 018529 245 ECTGN 249 (354)
Q Consensus 245 d~~g~ 249 (354)
.+.|.
T Consensus 79 ~~ag~ 83 (238)
T PRK08264 79 NNAGI 83 (238)
T ss_pred ECCCc
Confidence 98876
No 309
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=96.01 E-value=0.068 Score=45.49 Aligned_cols=73 Identities=27% Similarity=0.421 Sum_probs=55.2
Q ss_pred eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH--hcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccC
Q 018529 172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK--KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN 249 (354)
Q Consensus 172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~--~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~ 249 (354)
.++|+|+|.+|...++.+...|. .|++++.++++.+... ++... ++..+..+ .+.++++.-..+|+++-++|.
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~~-~v~gd~t~---~~~L~~agi~~aD~vva~t~~ 76 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDTH-VVIGDATD---EDVLEEAGIDDADAVVAATGN 76 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcceE-EEEecCCC---HHHHHhcCCCcCCEEEEeeCC
Confidence 57889999999999999999998 9999999999987733 35554 44333333 234666643479999999988
No 310
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=96.01 E-value=0.15 Score=44.10 Aligned_cols=101 Identities=16% Similarity=0.143 Sum_probs=60.5
Q ss_pred CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhc--CCceE-EcCCCCChhHHHHHHHHcCCCccEE
Q 018529 168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF--GVTDF-VNTSEHDRPIQEVIAEMTNGGVDRS 243 (354)
Q Consensus 168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~l--g~~~v-~~~~~~~~~~~~~i~~~~~~~~dvv 243 (354)
..+.+|||+|+ |.+|...+..+...|. .|+++.++.++.+..... ++..+ .|..+.. +.+.+....++|+|
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~----~~l~~~~~~~~d~v 89 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGS----DKLVEAIGDDSDAV 89 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeCCCCH----HHHHHHhhcCCCEE
Confidence 34679999997 9999999888888898 888888887765433221 23222 2333211 12222221268999
Q ss_pred EEcccChH-------------hHHHHHHHhhCC-CceEEEEcCC
Q 018529 244 VECTGNID-------------NMISAFECVHDG-WGVAVLVGVP 273 (354)
Q Consensus 244 ~d~~g~~~-------------~~~~~~~~l~~~-~g~~v~~g~~ 273 (354)
|.++|... ....+++.+... .+++++++..
T Consensus 90 i~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 90 ICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred EECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 98876421 123444444432 2688887764
No 311
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=96.00 E-value=0.11 Score=45.10 Aligned_cols=98 Identities=22% Similarity=0.205 Sum_probs=68.4
Q ss_pred hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHc-CCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCC
Q 018529 161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGG 239 (354)
Q Consensus 161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~-g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~ 239 (354)
+.......++++||=+|+|. |..+..+++.. +. +|++++.+++-.+.+++.+++.+. .+ .. .+ ...+.
T Consensus 21 ll~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~~----~d--~~-~~--~~~~~ 89 (255)
T PRK14103 21 LLARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDART----GD--VR-DW--KPKPD 89 (255)
T ss_pred HHHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEEE----cC--hh-hC--CCCCC
Confidence 34556678889999999875 77777888875 45 899999999998888876654322 11 21 11 11237
Q ss_pred ccEEEEccc-----C-hHhHHHHHHHhhCCCceEEEE
Q 018529 240 VDRSVECTG-----N-IDNMISAFECVHDGWGVAVLV 270 (354)
Q Consensus 240 ~dvv~d~~g-----~-~~~~~~~~~~l~~~~g~~v~~ 270 (354)
||+|+.... . ...+..+.+.|+++ |++++.
T Consensus 90 fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~ 125 (255)
T PRK14103 90 TDVVVSNAALQWVPEHADLLVRWVDELAPG-SWIAVQ 125 (255)
T ss_pred ceEEEEehhhhhCCCHHHHHHHHHHhCCCC-cEEEEE
Confidence 999987442 2 34677888899997 998765
No 312
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.00 E-value=0.058 Score=46.81 Aligned_cols=79 Identities=23% Similarity=0.270 Sum_probs=50.7
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCceE-E--cCCCCChhHHHHHHHHc--CC
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF-V--NTSEHDRPIQEVIAEMT--NG 238 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~v-~--~~~~~~~~~~~~i~~~~--~~ 238 (354)
++.++||+|+ |.+|...+..+...|+ +|+.+++++++.+.+ ++.+.... + |..+. ..+.+.+.+.. .+
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~ 83 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNE-DAVNAGIDKVAERFG 83 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCH-HHHHHHHHHHHHHcC
Confidence 4689999997 9999999999889999 888888888655433 33454322 1 22221 11222222221 13
Q ss_pred CccEEEEcccC
Q 018529 239 GVDRSVECTGN 249 (354)
Q Consensus 239 ~~dvv~d~~g~ 249 (354)
++|+++.++|.
T Consensus 84 ~~d~vi~~ag~ 94 (262)
T PRK13394 84 SVDILVSNAGI 94 (262)
T ss_pred CCCEEEECCcc
Confidence 68999998874
No 313
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=96.00 E-value=0.13 Score=41.30 Aligned_cols=89 Identities=21% Similarity=0.293 Sum_probs=58.5
Q ss_pred eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccChH
Q 018529 172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID 251 (354)
Q Consensus 172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~ 251 (354)
+|-++|.|.+|...+.-+...|. .|.+.++++++.+.+.+.|+.. .+ + ..+.+++ .|+||-|+...+
T Consensus 3 ~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~-~~--s----~~e~~~~-----~dvvi~~v~~~~ 69 (163)
T PF03446_consen 3 KIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEV-AD--S----PAEAAEQ-----ADVVILCVPDDD 69 (163)
T ss_dssp EEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEE-ES--S----HHHHHHH-----BSEEEE-SSSHH
T ss_pred EEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhh-hh--h----hhhHhhc-----ccceEeecccch
Confidence 68889999999998888888899 8999999999999888877432 21 1 3333333 589999988765
Q ss_pred hHHHHHH------HhhCCCceEEEEcCCC
Q 018529 252 NMISAFE------CVHDGWGVAVLVGVPS 274 (354)
Q Consensus 252 ~~~~~~~------~l~~~~g~~v~~g~~~ 274 (354)
..+..+. .+.++ ..++.++...
T Consensus 70 ~v~~v~~~~~i~~~l~~g-~iiid~sT~~ 97 (163)
T PF03446_consen 70 AVEAVLFGENILAGLRPG-KIIIDMSTIS 97 (163)
T ss_dssp HHHHHHHCTTHGGGS-TT-EEEEE-SS--
T ss_pred hhhhhhhhhHHhhccccc-eEEEecCCcc
Confidence 5555443 34454 5666665544
No 314
>PRK06194 hypothetical protein; Provisional
Probab=96.00 E-value=0.054 Score=47.82 Aligned_cols=79 Identities=19% Similarity=0.262 Sum_probs=49.8
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-Hhc---CCce-EE--cCCCCChhHHHHHHHHc--CC
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKF---GVTD-FV--NTSEHDRPIQEVIAEMT--NG 238 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~l---g~~~-v~--~~~~~~~~~~~~i~~~~--~~ 238 (354)
++.++||+|+ |.+|...+..+...|+ +|+.++++.++.+.. .++ +... ++ |..+. .++.+.+.... .+
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~~~~~~~g 82 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDA-AQVEALADAALERFG 82 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCH-HHHHHHHHHHHHHcC
Confidence 3578999987 9999999988888899 888898887654433 222 3321 12 22221 12322222221 13
Q ss_pred CccEEEEcccC
Q 018529 239 GVDRSVECTGN 249 (354)
Q Consensus 239 ~~dvv~d~~g~ 249 (354)
++|++|+++|.
T Consensus 83 ~id~vi~~Ag~ 93 (287)
T PRK06194 83 AVHLLFNNAGV 93 (287)
T ss_pred CCCEEEECCCC
Confidence 68999999875
No 315
>PRK05884 short chain dehydrogenase; Provisional
Probab=95.99 E-value=0.067 Score=45.44 Aligned_cols=74 Identities=23% Similarity=0.298 Sum_probs=48.9
Q ss_pred eEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCceE-EcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529 172 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVECTG 248 (354)
Q Consensus 172 ~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~~v-~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g 248 (354)
+++|+|+ |.+|...++.+...|+ +|+.+++++++.+.+ ++++...+ .|..+. ..+.+.++++. +.+|+++++.|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~-~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTDP-ASLEEARGLFP-HHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCCH-HHHHHHHHHHh-hcCcEEEECCC
Confidence 4899987 9999999988888899 888898988776644 44554322 233322 12333333332 25899998865
No 316
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.98 E-value=0.051 Score=47.10 Aligned_cols=79 Identities=16% Similarity=0.327 Sum_probs=49.6
Q ss_pred CCCeEEEEcCC---hhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCce--E--EcCCCCChhHHHHHHHHcC--CC
Q 018529 169 RGSSVAVFGLG---AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--F--VNTSEHDRPIQEVIAEMTN--GG 239 (354)
Q Consensus 169 ~~~~vlI~G~g---~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~--v--~~~~~~~~~~~~~i~~~~~--~~ 239 (354)
.++++||+|++ ++|.+.++.+...|+ +|+.+.++++..+.++++.... . .|..+. .+..+.+.+... +.
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~g~ 83 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVASD-ESIERAFATIKERVGK 83 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCCH-HHHHHHHHHHHHHhCC
Confidence 57899999864 899998888888999 8888888755444555542211 1 233322 122222222221 47
Q ss_pred ccEEEEcccC
Q 018529 240 VDRSVECTGN 249 (354)
Q Consensus 240 ~dvv~d~~g~ 249 (354)
+|++++++|.
T Consensus 84 iD~lv~nAg~ 93 (252)
T PRK06079 84 IDGIVHAIAY 93 (252)
T ss_pred CCEEEEcccc
Confidence 9999998873
No 317
>PRK06138 short chain dehydrogenase; Provisional
Probab=95.97 E-value=0.043 Score=47.31 Aligned_cols=79 Identities=22% Similarity=0.263 Sum_probs=49.7
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hc--CCc-eEE--cCCCCChhHHHHHHHHc--CCC
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF--GVT-DFV--NTSEHDRPIQEVIAEMT--NGG 239 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~l--g~~-~v~--~~~~~~~~~~~~i~~~~--~~~ 239 (354)
++.++||+|+ |.+|...++.+...|+ +|+.+.++.++.+... ++ +.. ..+ |..+. ..+.+.+.+.. .++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~i~~~~~~ 81 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSA-EAVEALVDFVAARWGR 81 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCH-HHHHHHHHHHHHHcCC
Confidence 4678999987 9999998888888898 8999988876554332 22 322 122 22221 12222222221 137
Q ss_pred ccEEEEcccC
Q 018529 240 VDRSVECTGN 249 (354)
Q Consensus 240 ~dvv~d~~g~ 249 (354)
+|+++.+.|.
T Consensus 82 id~vi~~ag~ 91 (252)
T PRK06138 82 LDVLVNNAGF 91 (252)
T ss_pred CCEEEECCCC
Confidence 9999999884
No 318
>PRK08643 acetoin reductase; Validated
Probab=95.96 E-value=0.047 Score=47.31 Aligned_cols=78 Identities=19% Similarity=0.243 Sum_probs=50.0
Q ss_pred CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCce-E--EcCCCCChhHHHHHHHHc--CCC
Q 018529 170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-F--VNTSEHDRPIQEVIAEMT--NGG 239 (354)
Q Consensus 170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~-v--~~~~~~~~~~~~~i~~~~--~~~ 239 (354)
++++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+.+ .+... . .|..+.+ .+.+.+.+.. .++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~ 79 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRD-QVFAAVRQVVDTFGD 79 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHH-HHHHHHHHHHHHcCC
Confidence 568899987 9999999999888999 89999888776554322 23221 1 2222221 2223233322 147
Q ss_pred ccEEEEcccC
Q 018529 240 VDRSVECTGN 249 (354)
Q Consensus 240 ~dvv~d~~g~ 249 (354)
+|+++.++|.
T Consensus 80 id~vi~~ag~ 89 (256)
T PRK08643 80 LNVVVNNAGV 89 (256)
T ss_pred CCEEEECCCC
Confidence 8999998864
No 319
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=95.96 E-value=0.19 Score=44.19 Aligned_cols=110 Identities=12% Similarity=0.053 Sum_probs=73.6
Q ss_pred CCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcC-Cc----eEEcCCCCC--hhHHHHHHHHcCC
Q 018529 167 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG-VT----DFVNTSEHD--RPIQEVIAEMTNG 238 (354)
Q Consensus 167 ~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg-~~----~v~~~~~~~--~~~~~~i~~~~~~ 238 (354)
.-+++.|+|+|| ++.|.+.+.-+...|. +|++..-+++..+.++..- .. ..+|..+.+ ++..+.+++..+.
T Consensus 26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf-~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~ 104 (322)
T KOG1610|consen 26 SLSDKAVLITGCDSGFGRLLAKKLDKKGF-RVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGE 104 (322)
T ss_pred ccCCcEEEEecCCcHHHHHHHHHHHhcCC-EEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccc
Confidence 355677999999 9999998888889999 8888877777766665422 11 134554443 3455566666655
Q ss_pred -CccEEEEcccCh--------------------------HhHHHHHHHhhCCCceEEEEcCCCCCc
Q 018529 239 -GVDRSVECTGNI--------------------------DNMISAFECVHDGWGVAVLVGVPSKDA 277 (354)
Q Consensus 239 -~~dvv~d~~g~~--------------------------~~~~~~~~~l~~~~g~~v~~g~~~~~~ 277 (354)
+.=-+++++|.. ......+..+++-.||+|.++...+..
T Consensus 105 ~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~ 170 (322)
T KOG1610|consen 105 DGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRV 170 (322)
T ss_pred ccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCc
Confidence 777888888731 223334445555459999998766543
No 320
>PLN00203 glutamyl-tRNA reductase
Probab=95.94 E-value=0.031 Score=53.46 Aligned_cols=73 Identities=21% Similarity=0.302 Sum_probs=51.9
Q ss_pred CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcC-Cce-EEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529 170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFG-VTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVEC 246 (354)
Q Consensus 170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~lg-~~~-v~~~~~~~~~~~~~i~~~~~~~~dvv~d~ 246 (354)
+.+|+|+|+|.+|.+++..+...|...|+++.++.++.+.+. +++ ... +....+ ..+.+ ..+|+||.|
T Consensus 266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~d----l~~al-----~~aDVVIsA 336 (519)
T PLN00203 266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLDE----MLACA-----AEADVVFTS 336 (519)
T ss_pred CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHhh----HHHHH-----hcCCEEEEc
Confidence 689999999999999999999999878999999988876654 453 221 111111 22222 258999999
Q ss_pred ccChH
Q 018529 247 TGNID 251 (354)
Q Consensus 247 ~g~~~ 251 (354)
++.+.
T Consensus 337 T~s~~ 341 (519)
T PLN00203 337 TSSET 341 (519)
T ss_pred cCCCC
Confidence 87643
No 321
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=95.93 E-value=0.048 Score=47.76 Aligned_cols=81 Identities=28% Similarity=0.308 Sum_probs=53.5
Q ss_pred CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCc------eEEcCCCCC--hhHHHHHHH
Q 018529 168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT------DFVNTSEHD--RPIQEVIAE 234 (354)
Q Consensus 168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~------~v~~~~~~~--~~~~~~i~~ 234 (354)
-.|+.+||+|+ .++|.+.+..+...|+ +|+.+.+++++.+...+ .+.. .+.|..+.+ +.+.+...+
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~ 84 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE 84 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence 46788999987 8999999999999999 89999899887655432 2221 222333221 122333333
Q ss_pred HcCCCccEEEEcccC
Q 018529 235 MTNGGVDRSVECTGN 249 (354)
Q Consensus 235 ~~~~~~dvv~d~~g~ 249 (354)
...|+.|+.++..|.
T Consensus 85 ~~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 85 KFFGKIDILVNNAGA 99 (270)
T ss_pred HhCCCCCEEEEcCCc
Confidence 333579999998775
No 322
>PLN02253 xanthoxin dehydrogenase
Probab=95.93 E-value=0.048 Score=48.02 Aligned_cols=79 Identities=19% Similarity=0.217 Sum_probs=49.4
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCC--c-eE--EcCCCCChhHHHHHHHHcC--CC
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGV--T-DF--VNTSEHDRPIQEVIAEMTN--GG 239 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~--~-~v--~~~~~~~~~~~~~i~~~~~--~~ 239 (354)
.+.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+ .+++. . .. .|..+.+ .+.+.+..... ++
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~-~~~~~~~~~~~~~g~ 94 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVED-DVSRAVDFTVDKFGT 94 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHH-HHHHHHHHHHHHhCC
Confidence 3678999987 9999998888888899 888888876654433 33321 1 11 2333321 22222222211 46
Q ss_pred ccEEEEcccC
Q 018529 240 VDRSVECTGN 249 (354)
Q Consensus 240 ~dvv~d~~g~ 249 (354)
+|++++++|.
T Consensus 95 id~li~~Ag~ 104 (280)
T PLN02253 95 LDIMVNNAGL 104 (280)
T ss_pred CCEEEECCCc
Confidence 9999998874
No 323
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=95.92 E-value=0.054 Score=48.86 Aligned_cols=78 Identities=22% Similarity=0.324 Sum_probs=49.8
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcC---Cc-eE--EcCCCCChhHHHHHHHHc--CC
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFG---VT-DF--VNTSEHDRPIQEVIAEMT--NG 238 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg---~~-~v--~~~~~~~~~~~~~i~~~~--~~ 238 (354)
++.++||+|+ |++|...++.+...|+ +|+.++++.++.+.+ .++. .. .. .|..+.+ .+.+.+.++. .+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~~ 82 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLD-SVRRFVDDFRALGK 82 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHH-HHHHHHHHHHHhCC
Confidence 4678999987 9999999888888898 888888888775543 3332 11 11 2333221 1222232221 23
Q ss_pred CccEEEEccc
Q 018529 239 GVDRSVECTG 248 (354)
Q Consensus 239 ~~dvv~d~~g 248 (354)
++|++++++|
T Consensus 83 ~iD~li~nAg 92 (322)
T PRK07453 83 PLDALVCNAA 92 (322)
T ss_pred CccEEEECCc
Confidence 6999999887
No 324
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=95.92 E-value=0.1 Score=47.33 Aligned_cols=34 Identities=38% Similarity=0.485 Sum_probs=30.8
Q ss_pred CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529 170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 203 (354)
Q Consensus 170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~ 203 (354)
..+|+|+|+|++|...++.+-..|.++++.+|.+
T Consensus 24 ~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D 57 (339)
T PRK07688 24 EKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD 57 (339)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 4679999999999999999999999999999876
No 325
>PRK07063 short chain dehydrogenase; Provisional
Probab=95.91 E-value=0.05 Score=47.28 Aligned_cols=79 Identities=22% Similarity=0.238 Sum_probs=50.6
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hc-----CCce-E--EcCCCCChhHHHHHHHHc--
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF-----GVTD-F--VNTSEHDRPIQEVIAEMT-- 236 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~l-----g~~~-v--~~~~~~~~~~~~~i~~~~-- 236 (354)
.++++||+|+ |++|...+..+...|+ +|+.+++++++.+.+. ++ +... . .|..+. .++.+.+.+..
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~ 83 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTDA-ASVAAAVAAAEEA 83 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCH-HHHHHHHHHHHHH
Confidence 4678999987 9999999998888999 8888888877655432 22 2211 1 233222 12333333221
Q ss_pred CCCccEEEEcccC
Q 018529 237 NGGVDRSVECTGN 249 (354)
Q Consensus 237 ~~~~dvv~d~~g~ 249 (354)
.+++|+++.++|.
T Consensus 84 ~g~id~li~~ag~ 96 (260)
T PRK07063 84 FGPLDVLVNNAGI 96 (260)
T ss_pred hCCCcEEEECCCc
Confidence 1479999999874
No 326
>PRK07904 short chain dehydrogenase; Provisional
Probab=95.91 E-value=0.083 Score=45.82 Aligned_cols=81 Identities=20% Similarity=0.263 Sum_probs=49.8
Q ss_pred CCCCCeEEEEcC-ChhHHHHHHHHHHcC-CcEEEEEcCChhh-HHH----HHhcCC-c-eE--EcCCCCChhHHHHHHHH
Q 018529 167 PERGSSVAVFGL-GAVGLAAAEGARIAG-ASRIIGVDRSSKR-FEE----AKKFGV-T-DF--VNTSEHDRPIQEVIAEM 235 (354)
Q Consensus 167 ~~~~~~vlI~G~-g~~G~~a~~~a~~~g-~~~vi~v~~~~~~-~~~----~~~lg~-~-~v--~~~~~~~~~~~~~i~~~ 235 (354)
+..+.++||+|+ |++|...++.+...| + +|+.+++++++ .+. +++.+. . .+ .|..+.+ ++.+.+++.
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~-~~~~~~~~~ 82 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTD-SHPKVIDAA 82 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChH-HHHHHHHHH
Confidence 456789999987 999999887766664 7 88888888764 332 233332 1 12 2333322 233333333
Q ss_pred cC-CCccEEEEcccC
Q 018529 236 TN-GGVDRSVECTGN 249 (354)
Q Consensus 236 ~~-~~~dvv~d~~g~ 249 (354)
.. ++.|+++.++|.
T Consensus 83 ~~~g~id~li~~ag~ 97 (253)
T PRK07904 83 FAGGDVDVAIVAFGL 97 (253)
T ss_pred HhcCCCCEEEEeeec
Confidence 22 479999987765
No 327
>PRK05717 oxidoreductase; Validated
Probab=95.90 E-value=0.057 Score=46.78 Aligned_cols=79 Identities=20% Similarity=0.254 Sum_probs=50.3
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCce---EEcCCCCChhHHHHHHHHcC--CCcc
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD---FVNTSEHDRPIQEVIAEMTN--GGVD 241 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~~---v~~~~~~~~~~~~~i~~~~~--~~~d 241 (354)
.|.++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+ ++++... ..|..+. ..+.+.+.+... +.+|
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~g~id 86 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVADE-AQVAAGVAEVLGQFGRLD 86 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCCH-HHHHHHHHHHHHHhCCCC
Confidence 4678999987 9999998888888898 888888776654433 4444321 1233222 122222333221 3689
Q ss_pred EEEEcccC
Q 018529 242 RSVECTGN 249 (354)
Q Consensus 242 vv~d~~g~ 249 (354)
++|.++|.
T Consensus 87 ~li~~ag~ 94 (255)
T PRK05717 87 ALVCNAAI 94 (255)
T ss_pred EEEECCCc
Confidence 99998874
No 328
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=95.90 E-value=0.046 Score=47.51 Aligned_cols=79 Identities=28% Similarity=0.300 Sum_probs=50.1
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh---cCCce---EEcCCCCChhHHHHHHHHc--CCC
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK---FGVTD---FVNTSEHDRPIQEVIAEMT--NGG 239 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~---lg~~~---v~~~~~~~~~~~~~i~~~~--~~~ 239 (354)
+++++||+|+ |.+|...++.+...|+ +|+.+++++...+..++ .+.+. ..|..+.+ +..+.+.+.. .++
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~ 84 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLETYA-GAQAAMAAAVEAFGR 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHH-HHHHHHHHHHHHcCC
Confidence 4678999987 9999999998888999 88888887644333333 34322 23333321 2223333322 137
Q ss_pred ccEEEEcccC
Q 018529 240 VDRSVECTGN 249 (354)
Q Consensus 240 ~dvv~d~~g~ 249 (354)
+|+++.++|.
T Consensus 85 id~lv~nAg~ 94 (260)
T PRK12823 85 IDVLINNVGG 94 (260)
T ss_pred CeEEEECCcc
Confidence 9999998873
No 329
>PRK08226 short chain dehydrogenase; Provisional
Probab=95.90 E-value=0.055 Score=47.07 Aligned_cols=79 Identities=20% Similarity=0.219 Sum_probs=49.9
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh---cCCce-E--EcCCCCChhHHHHHHHHc--CCC
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK---FGVTD-F--VNTSEHDRPIQEVIAEMT--NGG 239 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~---lg~~~-v--~~~~~~~~~~~~~i~~~~--~~~ 239 (354)
++.+++|+|+ |.+|...+..+...|+ +|+.++++++..+.+++ .+... . .|..+. .++.+.+.+.. .+.
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~~~ 82 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRDP-ASVAAAIKRAKEKEGR 82 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCH-HHHHHHHHHHHHHcCC
Confidence 4678999987 9999999998888999 89999888754444333 23221 1 222221 12222222221 136
Q ss_pred ccEEEEcccC
Q 018529 240 VDRSVECTGN 249 (354)
Q Consensus 240 ~dvv~d~~g~ 249 (354)
.|++|.+.|.
T Consensus 83 id~vi~~ag~ 92 (263)
T PRK08226 83 IDILVNNAGV 92 (263)
T ss_pred CCEEEECCCc
Confidence 8999998873
No 330
>PRK06701 short chain dehydrogenase; Provisional
Probab=95.90 E-value=0.18 Score=44.67 Aligned_cols=81 Identities=21% Similarity=0.168 Sum_probs=47.9
Q ss_pred CCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhh-H----HHHHhcCCce-E--EcCCCCChhHHHHHHHHc-
Q 018529 167 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-F----EEAKKFGVTD-F--VNTSEHDRPIQEVIAEMT- 236 (354)
Q Consensus 167 ~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~-~----~~~~~lg~~~-v--~~~~~~~~~~~~~i~~~~- 236 (354)
.-++.++||+|+ |.+|...+..+...|+ +|+.+.++.++ . +.++..+... . .|..+.+ .+.+.+.+..
T Consensus 43 ~~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~i~~ 120 (290)
T PRK06701 43 KLKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEA-FCKDAVEETVR 120 (290)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHH-HHHHHHHHHHH
Confidence 345788999987 9999998888888899 78888776432 2 1222334322 2 2222221 2222232221
Q ss_pred -CCCccEEEEcccC
Q 018529 237 -NGGVDRSVECTGN 249 (354)
Q Consensus 237 -~~~~dvv~d~~g~ 249 (354)
.+++|++|.++|.
T Consensus 121 ~~~~iD~lI~~Ag~ 134 (290)
T PRK06701 121 ELGRLDILVNNAAF 134 (290)
T ss_pred HcCCCCEEEECCcc
Confidence 1368999998774
No 331
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=95.89 E-value=0.24 Score=45.98 Aligned_cols=106 Identities=17% Similarity=0.242 Sum_probs=62.0
Q ss_pred cCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHH-------HHHhc-CCceE-EcCCCCChhHHHHHHH
Q 018529 165 AKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE-------EAKKF-GVTDF-VNTSEHDRPIQEVIAE 234 (354)
Q Consensus 165 ~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~-------~~~~l-g~~~v-~~~~~~~~~~~~~i~~ 234 (354)
..-..+.+|||+|+ |.+|...+..+...|. .|++++++..+.+ ..... ++..+ .|..+. ..+.+.++.
T Consensus 55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~-~~l~~~~~~ 132 (390)
T PLN02657 55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDA-DSLRKVLFS 132 (390)
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCH-HHHHHHHHH
Confidence 34466789999987 9999999998888898 8888888765421 11112 33222 233322 123333333
Q ss_pred HcCCCccEEEEcccChH------------hHHHHHHHhhCC-CceEEEEcCC
Q 018529 235 MTNGGVDRSVECTGNID------------NMISAFECVHDG-WGVAVLVGVP 273 (354)
Q Consensus 235 ~~~~~~dvv~d~~g~~~------------~~~~~~~~l~~~-~g~~v~~g~~ 273 (354)
. .+++|+||+|++... ....+++.+... .+++|+++..
T Consensus 133 ~-~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~ 183 (390)
T PLN02657 133 E-GDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAI 183 (390)
T ss_pred h-CCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeec
Confidence 2 116999999886421 122334433332 2578887754
No 332
>PRK07035 short chain dehydrogenase; Provisional
Probab=95.89 E-value=0.055 Score=46.77 Aligned_cols=79 Identities=22% Similarity=0.260 Sum_probs=50.1
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCc-eEE--cCCCCChhHHHHHHHHcC--C
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFV--NTSEHDRPIQEVIAEMTN--G 238 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~-~v~--~~~~~~~~~~~~i~~~~~--~ 238 (354)
++.++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+.+ .+.. ..+ +..+. .+..+.+++... +
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~ 84 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEM-EQIDALFAHIRERHG 84 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCH-HHHHHHHHHHHHHcC
Confidence 3578999987 9999999999988999 89999988776554322 2322 122 22222 122222322211 3
Q ss_pred CccEEEEcccC
Q 018529 239 GVDRSVECTGN 249 (354)
Q Consensus 239 ~~dvv~d~~g~ 249 (354)
.+|+++.+.|.
T Consensus 85 ~id~li~~ag~ 95 (252)
T PRK07035 85 RLDILVNNAAA 95 (252)
T ss_pred CCCEEEECCCc
Confidence 68999998873
No 333
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=95.88 E-value=0.074 Score=48.18 Aligned_cols=35 Identities=34% Similarity=0.441 Sum_probs=31.2
Q ss_pred CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529 170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS 204 (354)
Q Consensus 170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~ 204 (354)
..+|+|+|+|++|...+..+-..|.++++.+|.+.
T Consensus 24 ~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 24 EKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 46799999999999999999999998999998764
No 334
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.88 E-value=0.065 Score=46.39 Aligned_cols=79 Identities=22% Similarity=0.353 Sum_probs=49.8
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhh--HHHHHhcCCce-E--EcCCCCChhHHHHHHHHc--CCCc
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR--FEEAKKFGVTD-F--VNTSEHDRPIQEVIAEMT--NGGV 240 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~--~~~~~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~~~ 240 (354)
+++++||+|+ +++|.+.++.+...|+ +|+.+.+++.. .+.+++.+... . .|..+.+ ++.+.+.+.. .+++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~g~i 84 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQQK-DIDSIVSQAVEVMGHI 84 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHH-HHHHHHHHHHHHcCCC
Confidence 4789999987 9999999998888999 88887765422 23344455432 1 2333322 2333333321 2479
Q ss_pred cEEEEcccC
Q 018529 241 DRSVECTGN 249 (354)
Q Consensus 241 dvv~d~~g~ 249 (354)
|+++++.|.
T Consensus 85 D~lv~~ag~ 93 (251)
T PRK12481 85 DILINNAGI 93 (251)
T ss_pred CEEEECCCc
Confidence 999998874
No 335
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=95.87 E-value=0.13 Score=45.19 Aligned_cols=98 Identities=18% Similarity=0.129 Sum_probs=61.8
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCC--------ceEEcCCCCChhHHHHHHHHcCCC
Q 018529 168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--------TDFVNTSEHDRPIQEVIAEMTNGG 239 (354)
Q Consensus 168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~--------~~v~~~~~~~~~~~~~i~~~~~~~ 239 (354)
+..++||++|+|. |..+..+++.....++++++.+++-.+.++++-. .++ .....+ ..+.+++. .+.
T Consensus 71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v-~i~~~D--~~~~l~~~-~~~ 145 (270)
T TIGR00417 71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRV-DLQIDD--GFKFLADT-ENT 145 (270)
T ss_pred CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCce-EEEECc--hHHHHHhC-CCC
Confidence 3456999998865 5556666776655689999999888777766310 111 011111 33444432 348
Q ss_pred ccEEEEccc----------ChHhHHHHHHHhhCCCceEEEEc
Q 018529 240 VDRSVECTG----------NIDNMISAFECVHDGWGVAVLVG 271 (354)
Q Consensus 240 ~dvv~d~~g----------~~~~~~~~~~~l~~~~g~~v~~g 271 (354)
+|+|+--.. ..+.++.+.+.|+++ |.++...
T Consensus 146 yDvIi~D~~~~~~~~~~l~~~ef~~~~~~~L~pg-G~lv~~~ 186 (270)
T TIGR00417 146 FDVIIVDSTDPVGPAETLFTKEFYELLKKALNED-GIFVAQS 186 (270)
T ss_pred ccEEEEeCCCCCCcccchhHHHHHHHHHHHhCCC-cEEEEcC
Confidence 999974322 234567888999998 9988763
No 336
>PRK07856 short chain dehydrogenase; Provisional
Probab=95.87 E-value=0.044 Score=47.40 Aligned_cols=77 Identities=18% Similarity=0.237 Sum_probs=47.8
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCce-EEcCCCCChhHHHHHHHHc--CCCccEEE
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMT--NGGVDRSV 244 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~i~~~~--~~~~dvv~ 244 (354)
.++++||+|+ |.+|...++.+...|+ +|+.++++.++. .....+.. ..|..+. ..+.+.+.... .+.+|++|
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~~--~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~id~vi 80 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPET--VDGRPAEFHAADVRDP-DQVAALVDAIVERHGRLDVLV 80 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhhh--hcCCceEEEEccCCCH-HHHHHHHHHHHHHcCCCCEEE
Confidence 4789999987 9999999988888899 888888877651 11111111 1233222 12333332221 13689999
Q ss_pred EcccC
Q 018529 245 ECTGN 249 (354)
Q Consensus 245 d~~g~ 249 (354)
.++|.
T Consensus 81 ~~ag~ 85 (252)
T PRK07856 81 NNAGG 85 (252)
T ss_pred ECCCC
Confidence 98873
No 337
>PRK12367 short chain dehydrogenase; Provisional
Probab=95.87 E-value=0.075 Score=45.90 Aligned_cols=72 Identities=22% Similarity=0.393 Sum_probs=46.1
Q ss_pred CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCCh-hhHHHHHhcCCceE--EcCCCCChhHHHHHHHHcCCCccEEEE
Q 018529 170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS-KRFEEAKKFGVTDF--VNTSEHDRPIQEVIAEMTNGGVDRSVE 245 (354)
Q Consensus 170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~-~~~~~~~~lg~~~v--~~~~~~~~~~~~~i~~~~~~~~dvv~d 245 (354)
+++++|+|+ |++|...++.+...|+ +|+++++++ ++.+.... +.... .|..+. +.+.+.. +++|++++
T Consensus 14 ~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~~-----~~~~~~~-~~iDilVn 85 (245)
T PRK12367 14 GKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESNDE-SPNEWIKWECGKE-----ESLDKQL-ASLDVLIL 85 (245)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhcc-CCCeEEEeeCCCH-----HHHHHhc-CCCCEEEE
Confidence 578999987 9999999998888999 888888776 22222111 11122 233221 1233322 36999999
Q ss_pred cccC
Q 018529 246 CTGN 249 (354)
Q Consensus 246 ~~g~ 249 (354)
++|.
T Consensus 86 nAG~ 89 (245)
T PRK12367 86 NHGI 89 (245)
T ss_pred CCcc
Confidence 9874
No 338
>PLN02244 tocopherol O-methyltransferase
Probab=95.87 E-value=0.052 Score=49.39 Aligned_cols=98 Identities=20% Similarity=0.221 Sum_probs=63.8
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhc----CCceEEcCCCCChhHHHHHHHHcCCCccEE
Q 018529 168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNGGVDRS 243 (354)
Q Consensus 168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~l----g~~~v~~~~~~~~~~~~~i~~~~~~~~dvv 243 (354)
+++++||=+|+|. |..+..+++..|+ +|++++.+++..+.+++. |...-+.+...+ ..+ + .+..+.||+|
T Consensus 117 ~~~~~VLDiGCG~-G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D--~~~-~-~~~~~~FD~V 190 (340)
T PLN02244 117 KRPKRIVDVGCGI-GGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVAD--ALN-Q-PFEDGQFDLV 190 (340)
T ss_pred CCCCeEEEecCCC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcC--ccc-C-CCCCCCccEE
Confidence 7889999999874 6677888888788 999999999877766542 331101111111 100 0 1122479999
Q ss_pred EEcccC------hHhHHHHHHHhhCCCceEEEEcC
Q 018529 244 VECTGN------IDNMISAFECVHDGWGVAVLVGV 272 (354)
Q Consensus 244 ~d~~g~------~~~~~~~~~~l~~~~g~~v~~g~ 272 (354)
+..... ...+..+.+.|+++ |++++...
T Consensus 191 ~s~~~~~h~~d~~~~l~e~~rvLkpG-G~lvi~~~ 224 (340)
T PLN02244 191 WSMESGEHMPDKRKFVQELARVAAPG-GRIIIVTW 224 (340)
T ss_pred EECCchhccCCHHHHHHHHHHHcCCC-cEEEEEEe
Confidence 864321 24677889999997 99987653
No 339
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=95.86 E-value=0.079 Score=44.62 Aligned_cols=35 Identities=23% Similarity=0.308 Sum_probs=31.1
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529 169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 203 (354)
Q Consensus 169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~ 203 (354)
...+|+|+|+|++|...++.+...|..+++.+|.+
T Consensus 27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 34689999999999999999999999889999876
No 340
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=95.86 E-value=0.11 Score=39.74 Aligned_cols=93 Identities=17% Similarity=0.288 Sum_probs=58.4
Q ss_pred EEEEcC-ChhHHHHHHHHHHcC--CcEEEEEcCChhh---HHHHHhcCCceEEcCCCCC-hhHHH---------------
Q 018529 173 VAVFGL-GAVGLAAAEGARIAG--ASRIIGVDRSSKR---FEEAKKFGVTDFVNTSEHD-RPIQE--------------- 230 (354)
Q Consensus 173 vlI~G~-g~~G~~a~~~a~~~g--~~~vi~v~~~~~~---~~~~~~lg~~~v~~~~~~~-~~~~~--------------- 230 (354)
|.|+|+ |.+|..++.+.+... . +|++.....+- .+.+++|....+...++.. ..+.+
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~ 79 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGP 79 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESH
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeCh
Confidence 578898 999999999999987 4 77777554433 2345678888777655432 11111
Q ss_pred -HHHHHcC-CCccEEEEcccChHhHHHHHHHhhCCCceE
Q 018529 231 -VIAEMTN-GGVDRSVECTGNIDNMISAFECVHDGWGVA 267 (354)
Q Consensus 231 -~i~~~~~-~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~ 267 (354)
.+.++.. ..+|+|+.++.+...+.-.+..+..+ -++
T Consensus 80 ~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~g-k~i 117 (129)
T PF02670_consen 80 EGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAG-KDI 117 (129)
T ss_dssp HHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTT-SEE
T ss_pred HHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCC-CeE
Confidence 1223333 37889988877767888888888874 443
No 341
>PRK12937 short chain dehydrogenase; Provisional
Probab=95.86 E-value=0.21 Score=42.77 Aligned_cols=79 Identities=18% Similarity=0.178 Sum_probs=46.2
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCCh-hhHH----HHHhcCCce-EE--cCCCCChhHHHHHHHHc--C
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS-KRFE----EAKKFGVTD-FV--NTSEHDRPIQEVIAEMT--N 237 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~-~~~~----~~~~lg~~~-v~--~~~~~~~~~~~~i~~~~--~ 237 (354)
++.++||+|+ |.+|...+..+...|+ +++.+.++. ++.+ .+++.+... .+ |..+. ..+.+.+++.. .
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~ 81 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADA-AAVTRLFDAAETAF 81 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCH-HHHHHHHHHHHHHc
Confidence 4678999987 9999999999999999 666655433 2222 223334321 22 22221 12222222221 1
Q ss_pred CCccEEEEcccC
Q 018529 238 GGVDRSVECTGN 249 (354)
Q Consensus 238 ~~~dvv~d~~g~ 249 (354)
+++|++|.++|.
T Consensus 82 ~~id~vi~~ag~ 93 (245)
T PRK12937 82 GRIDVLVNNAGV 93 (245)
T ss_pred CCCCEEEECCCC
Confidence 478999998874
No 342
>PRK06181 short chain dehydrogenase; Provisional
Probab=95.85 E-value=0.06 Score=46.85 Aligned_cols=78 Identities=26% Similarity=0.372 Sum_probs=49.3
Q ss_pred CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce-EE--cCCCCChhHHHHHHHHcC--CC
Q 018529 170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMTN--GG 239 (354)
Q Consensus 170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v~--~~~~~~~~~~~~i~~~~~--~~ 239 (354)
+.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+ +..+... ++ |..+. ..+.+.+.+... ++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~ 78 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSDA-EACERLIEAAVARFGG 78 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCH-HHHHHHHHHHHHHcCC
Confidence 357999987 9999999999889998 899998887664433 2234321 12 22221 123333333221 36
Q ss_pred ccEEEEcccC
Q 018529 240 VDRSVECTGN 249 (354)
Q Consensus 240 ~dvv~d~~g~ 249 (354)
+|+++.++|.
T Consensus 79 id~vi~~ag~ 88 (263)
T PRK06181 79 IDILVNNAGI 88 (263)
T ss_pred CCEEEECCCc
Confidence 8999999874
No 343
>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating). Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.
Probab=95.85 E-value=0.15 Score=44.83 Aligned_cols=91 Identities=20% Similarity=0.259 Sum_probs=58.2
Q ss_pred eEEEEcCChhHHHH-HHHHHHcCCcEEEE-EcCChhh--HHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529 172 SVAVFGLGAVGLAA-AEGARIAGASRIIG-VDRSSKR--FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 247 (354)
Q Consensus 172 ~vlI~G~g~~G~~a-~~~a~~~g~~~vi~-v~~~~~~--~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~ 247 (354)
+|.|+|+|.+|... ..+....+. .+.+ ++.++++ +++++++|....... +.+.+. ...+|+||+++
T Consensus 3 rVAIIG~G~IG~~h~~~ll~~~~~-elvaV~d~d~es~~la~A~~~Gi~~~~~~------~e~ll~---~~dIDaV~iaT 72 (285)
T TIGR03215 3 KVAIIGSGNIGTDLMYKLLRSEHL-EMVAMVGIDPESDGLARARELGVKTSAEG------VDGLLA---NPDIDIVFDAT 72 (285)
T ss_pred EEEEEeCcHHHHHHHHHHHhCCCc-EEEEEEeCCcccHHHHHHHHCCCCEEECC------HHHHhc---CCCCCEEEECC
Confidence 57899999999865 455554566 4444 4445544 567788887544321 222222 13699999999
Q ss_pred cChHhHHHHHHHhhCCCceEEEEcCCC
Q 018529 248 GNIDNMISAFECVHDGWGVAVLVGVPS 274 (354)
Q Consensus 248 g~~~~~~~~~~~l~~~~g~~v~~g~~~ 274 (354)
+...+.+.+..++.. |+.++...+.
T Consensus 73 p~~~H~e~a~~al~a--Gk~VIdekPa 97 (285)
T TIGR03215 73 SAKAHARHARLLAEL--GKIVIDLTPA 97 (285)
T ss_pred CcHHHHHHHHHHHHc--CCEEEECCcc
Confidence 997777777777766 5666555443
No 344
>PRK05876 short chain dehydrogenase; Provisional
Probab=95.83 E-value=0.079 Score=46.60 Aligned_cols=79 Identities=20% Similarity=0.247 Sum_probs=50.2
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce-E--EcCCCCChhHHHHHHHHc--CC
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMT--NG 238 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~ 238 (354)
.++++||+|+ |++|...+..+...|+ +|+.+++++++.+.+ +..+... . .|..+.+ ++.+.+.+.. .+
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~g 82 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHRE-EVTHLADEAFRLLG 82 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHH-HHHHHHHHHHHHcC
Confidence 4678999987 9999999988888999 788888887665533 2234322 1 2332221 2222222221 13
Q ss_pred CccEEEEcccC
Q 018529 239 GVDRSVECTGN 249 (354)
Q Consensus 239 ~~dvv~d~~g~ 249 (354)
.+|++++++|.
T Consensus 83 ~id~li~nAg~ 93 (275)
T PRK05876 83 HVDVVFSNAGI 93 (275)
T ss_pred CCCEEEECCCc
Confidence 68999998873
No 345
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=95.83 E-value=0.2 Score=37.75 Aligned_cols=89 Identities=24% Similarity=0.383 Sum_probs=61.9
Q ss_pred eEEEEcCChhHHHHHHHHHHc--CCcEEE-EEcCChhhHHH-HHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529 172 SVAVFGLGAVGLAAAEGARIA--GASRII-GVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 247 (354)
Q Consensus 172 ~vlI~G~g~~G~~a~~~a~~~--g~~~vi-~v~~~~~~~~~-~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~ 247 (354)
++.|+|+|.+|.....-++.. +. .++ ++++++++.+. .+++|.. .+ .+ +.+.+.+ ..+|+|+.++
T Consensus 2 ~v~iiG~G~~g~~~~~~~~~~~~~~-~v~~v~d~~~~~~~~~~~~~~~~-~~--~~----~~~ll~~---~~~D~V~I~t 70 (120)
T PF01408_consen 2 RVGIIGAGSIGRRHLRALLRSSPDF-EVVAVCDPDPERAEAFAEKYGIP-VY--TD----LEELLAD---EDVDAVIIAT 70 (120)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTTTE-EEEEEECSSHHHHHHHHHHTTSE-EE--SS----HHHHHHH---TTESEEEEES
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCc-EEEEEEeCCHHHHHHHHHHhccc-ch--hH----HHHHHHh---hcCCEEEEec
Confidence 578999999999887666655 44 444 55677776665 5668876 32 22 4333333 2699999999
Q ss_pred cChHhHHHHHHHhhCCCceEEEEcCC
Q 018529 248 GNIDNMISAFECVHDGWGVAVLVGVP 273 (354)
Q Consensus 248 g~~~~~~~~~~~l~~~~g~~v~~g~~ 273 (354)
+.....+.+..++.. |.-+++.-+
T Consensus 71 p~~~h~~~~~~~l~~--g~~v~~EKP 94 (120)
T PF01408_consen 71 PPSSHAEIAKKALEA--GKHVLVEKP 94 (120)
T ss_dssp SGGGHHHHHHHHHHT--TSEEEEESS
T ss_pred CCcchHHHHHHHHHc--CCEEEEEcC
Confidence 987888888888887 556667544
No 346
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=95.83 E-value=0.083 Score=46.84 Aligned_cols=37 Identities=22% Similarity=0.326 Sum_probs=31.8
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529 168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS 204 (354)
Q Consensus 168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~ 204 (354)
-.+++++|+|+|++|.+++..+...|+++|+++.|+.
T Consensus 124 ~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 124 VKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 3567899999999999988888889997799998885
No 347
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=95.81 E-value=0.063 Score=46.34 Aligned_cols=76 Identities=22% Similarity=0.345 Sum_probs=50.1
Q ss_pred eEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCce-E--EcCCCCChhHHHHHHHHcC--CCccEEE
Q 018529 172 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD-F--VNTSEHDRPIQEVIAEMTN--GGVDRSV 244 (354)
Q Consensus 172 ~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~~-v--~~~~~~~~~~~~~i~~~~~--~~~dvv~ 244 (354)
+++|+|+ |.+|...+..+...|+ +|+++++++++.+.+.+ ++... . .|..+. ..+.+.+.+... ++.|+++
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~i~~~~~~~~~~~~~id~vi 79 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRNR-AAIEEMLASLPAEWRNIDVLV 79 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCCH-HHHHHHHHHHHHHcCCCCEEE
Confidence 5899987 9999999999888999 89999998887765533 34321 1 233222 123333333221 3689999
Q ss_pred EcccC
Q 018529 245 ECTGN 249 (354)
Q Consensus 245 d~~g~ 249 (354)
.++|.
T Consensus 80 ~~ag~ 84 (248)
T PRK10538 80 NNAGL 84 (248)
T ss_pred ECCCc
Confidence 98874
No 348
>PRK06197 short chain dehydrogenase; Provisional
Probab=95.81 E-value=0.068 Score=47.79 Aligned_cols=79 Identities=15% Similarity=0.265 Sum_probs=49.3
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-Hhc-----CCc-eE--EcCCCCChhHHHHHHHHcC-
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKF-----GVT-DF--VNTSEHDRPIQEVIAEMTN- 237 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~l-----g~~-~v--~~~~~~~~~~~~~i~~~~~- 237 (354)
.+.++||+|+ |++|...++.+...|+ +|+.+.++.++.+.+ +++ +.. .. .|..+. ..+.+.+.++..
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~-~~v~~~~~~~~~~ 92 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSL-ASVRAAADALRAA 92 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCH-HHHHHHHHHHHhh
Confidence 5689999987 9999998888888899 888888887664432 111 111 11 232222 123333333321
Q ss_pred -CCccEEEEcccC
Q 018529 238 -GGVDRSVECTGN 249 (354)
Q Consensus 238 -~~~dvv~d~~g~ 249 (354)
+++|++|.++|.
T Consensus 93 ~~~iD~li~nAg~ 105 (306)
T PRK06197 93 YPRIDLLINNAGV 105 (306)
T ss_pred CCCCCEEEECCcc
Confidence 368999998873
No 349
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=95.80 E-value=0.086 Score=45.79 Aligned_cols=76 Identities=26% Similarity=0.381 Sum_probs=48.3
Q ss_pred eEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH----hcCCceEE--cCCCCChhHHHHHHHHc--CCCccE
Q 018529 172 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDFV--NTSEHDRPIQEVIAEMT--NGGVDR 242 (354)
Q Consensus 172 ~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~----~lg~~~v~--~~~~~~~~~~~~i~~~~--~~~~dv 242 (354)
++||+|+ +++|...++.+...|+ +|+.+++++++.+.+. +.+....+ |..+. .++.+.+++.. .+++|+
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~-~~~~~~~~~~~~~~g~id~ 79 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSDK-DDLKNLVKEAWELLGGIDA 79 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCH-HHHHHHHHHHHHhcCCCCE
Confidence 6899987 9999998888888899 8999988887654432 22322222 22221 12333333322 247999
Q ss_pred EEEcccC
Q 018529 243 SVECTGN 249 (354)
Q Consensus 243 v~d~~g~ 249 (354)
+++++|.
T Consensus 80 li~naG~ 86 (259)
T PRK08340 80 LVWNAGN 86 (259)
T ss_pred EEECCCC
Confidence 9998874
No 350
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=95.80 E-value=0.081 Score=46.42 Aligned_cols=71 Identities=21% Similarity=0.248 Sum_probs=48.6
Q ss_pred CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcC---CceEEcCCCCChhHHHHHHHHcCCCccE
Q 018529 167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFG---VTDFVNTSEHDRPIQEVIAEMTNGGVDR 242 (354)
Q Consensus 167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg---~~~v~~~~~~~~~~~~~i~~~~~~~~dv 242 (354)
..++++++|+|+|++|.+.+..+...|. +|++++++.++.+.+ +++. ...... +.+ .....+|+
T Consensus 114 ~~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~~-------~~~----~~~~~~Di 181 (270)
T TIGR00507 114 LRPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAFS-------MDE----LPLHRVDL 181 (270)
T ss_pred CccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEec-------hhh----hcccCccE
Confidence 3557899999999999998888888898 899999988775543 3332 211211 111 11125899
Q ss_pred EEEcccC
Q 018529 243 SVECTGN 249 (354)
Q Consensus 243 v~d~~g~ 249 (354)
|++|++.
T Consensus 182 vInatp~ 188 (270)
T TIGR00507 182 IINATSA 188 (270)
T ss_pred EEECCCC
Confidence 9999875
No 351
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=95.79 E-value=0.092 Score=45.13 Aligned_cols=35 Identities=31% Similarity=0.443 Sum_probs=30.6
Q ss_pred CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529 170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS 204 (354)
Q Consensus 170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~ 204 (354)
+.+|+|+|+|++|..+++.+...|.++++.+|.+.
T Consensus 24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ 58 (240)
T TIGR02355 24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDT 58 (240)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 36899999999999999999999998998887543
No 352
>PRK05875 short chain dehydrogenase; Provisional
Probab=95.79 E-value=0.066 Score=46.99 Aligned_cols=78 Identities=21% Similarity=0.394 Sum_probs=50.1
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-Hhc---C--Cc-eEE--cCCCCChhHHHHHHHHcC-
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKF---G--VT-DFV--NTSEHDRPIQEVIAEMTN- 237 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~l---g--~~-~v~--~~~~~~~~~~~~i~~~~~- 237 (354)
++.++||+|+ |.+|...++.+...|+ +|+.++++.++.+.. +++ + .. .++ |..+. ..+.+.+++...
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~ 83 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDE-DQVARAVDAATAW 83 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCH-HHHHHHHHHHHHH
Confidence 3679999997 9999999999999999 899998887665433 222 1 11 122 33222 123333333221
Q ss_pred -CCccEEEEccc
Q 018529 238 -GGVDRSVECTG 248 (354)
Q Consensus 238 -~~~dvv~d~~g 248 (354)
+++|++|.++|
T Consensus 84 ~~~~d~li~~ag 95 (276)
T PRK05875 84 HGRLHGVVHCAG 95 (276)
T ss_pred cCCCCEEEECCC
Confidence 36899999887
No 353
>PRK07985 oxidoreductase; Provisional
Probab=95.77 E-value=0.16 Score=45.21 Aligned_cols=79 Identities=19% Similarity=0.220 Sum_probs=47.3
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCCh--hhHHHH----HhcCCce-E--EcCCCCChhHHHHHHHHc--
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS--KRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMT-- 236 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~--~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~i~~~~-- 236 (354)
+++++||+|+ |++|...++.+...|+ +|+.+.++. ++.+.+ ++.+... . .|..+. +.+.+.+.+..
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~ 125 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDE-KFARSLVHEAHKA 125 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCH-HHHHHHHHHHHHH
Confidence 5678999987 9999999988888999 777775432 232222 2334322 1 233222 12333333322
Q ss_pred CCCccEEEEcccC
Q 018529 237 NGGVDRSVECTGN 249 (354)
Q Consensus 237 ~~~~dvv~d~~g~ 249 (354)
.+++|+++.+.|.
T Consensus 126 ~g~id~lv~~Ag~ 138 (294)
T PRK07985 126 LGGLDIMALVAGK 138 (294)
T ss_pred hCCCCEEEECCCC
Confidence 1378999998763
No 354
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=95.77 E-value=0.089 Score=45.27 Aligned_cols=79 Identities=22% Similarity=0.263 Sum_probs=50.3
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCc-eEEcCCCCC-hhHHHHHHHHcC--CC
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHD-RPIQEVIAEMTN--GG 239 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~-~v~~~~~~~-~~~~~~i~~~~~--~~ 239 (354)
++.++||+|+ |.+|...+..+...|+ .|+.++++.++.+.+.+ .+.. .++..+-.+ ..+.+.++.... ++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 80 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP 80 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999987 9999999999888999 88888888776554422 2322 222222222 122233332221 36
Q ss_pred ccEEEEccc
Q 018529 240 VDRSVECTG 248 (354)
Q Consensus 240 ~dvv~d~~g 248 (354)
+|++|.++|
T Consensus 81 ~d~vi~~ag 89 (250)
T TIGR03206 81 VDVLVNNAG 89 (250)
T ss_pred CCEEEECCC
Confidence 899999987
No 355
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.77 E-value=0.082 Score=46.07 Aligned_cols=79 Identities=15% Similarity=0.220 Sum_probs=47.8
Q ss_pred CCCeEEEEcC-C--hhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCceE--EcCCCCChhHHHHHHHHcC--
Q 018529 169 RGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF--VNTSEHDRPIQEVIAEMTN-- 237 (354)
Q Consensus 169 ~~~~vlI~G~-g--~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~v--~~~~~~~~~~~~~i~~~~~-- 237 (354)
.++++||+|+ + ++|.+.++.+...|+ +|+.+.++++..+.+ +++|.... .|..+.+ +..+.+++...
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~-~v~~~~~~~~~~~ 84 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPK-SISNLFDDIKEKW 84 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHH-HHHHHHHHHHHHc
Confidence 5788999987 4 799998887778899 788777764322222 22343322 3443322 23333333222
Q ss_pred CCccEEEEcccC
Q 018529 238 GGVDRSVECTGN 249 (354)
Q Consensus 238 ~~~dvv~d~~g~ 249 (354)
+.+|++++++|.
T Consensus 85 g~iDilVnnag~ 96 (260)
T PRK06603 85 GSFDFLLHGMAF 96 (260)
T ss_pred CCccEEEEcccc
Confidence 479999998763
No 356
>PLN03139 formate dehydrogenase; Provisional
Probab=95.76 E-value=0.1 Score=48.06 Aligned_cols=91 Identities=18% Similarity=0.149 Sum_probs=62.5
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529 169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 248 (354)
Q Consensus 169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g 248 (354)
.|.+|.|+|.|.||...++.++.+|. +|++.+++....+..+++|+..+ . + +.+.+. ..|+|+.+.+
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g~~~~---~--~--l~ell~-----~sDvV~l~lP 264 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETGAKFE---E--D--LDAMLP-----KCDVVVINTP 264 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcCceec---C--C--HHHHHh-----hCCEEEEeCC
Confidence 57899999999999999999999999 89999887655555555664321 1 1 333332 2688887776
Q ss_pred ChHhH-----HHHHHHhhCCCceEEEEcCC
Q 018529 249 NIDNM-----ISAFECVHDGWGVAVLVGVP 273 (354)
Q Consensus 249 ~~~~~-----~~~~~~l~~~~g~~v~~g~~ 273 (354)
..+.. ...++.|+++ ..+|.++..
T Consensus 265 lt~~T~~li~~~~l~~mk~g-a~lIN~aRG 293 (386)
T PLN03139 265 LTEKTRGMFNKERIAKMKKG-VLIVNNARG 293 (386)
T ss_pred CCHHHHHHhCHHHHhhCCCC-eEEEECCCC
Confidence 43221 2456678886 777777653
No 357
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=95.76 E-value=0.072 Score=46.20 Aligned_cols=78 Identities=24% Similarity=0.346 Sum_probs=50.8
Q ss_pred CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcCCce-E--EcCCCCChhHHHHHHHHc--CCCccE
Q 018529 170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD-F--VNTSEHDRPIQEVIAEMT--NGGVDR 242 (354)
Q Consensus 170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~~~dv 242 (354)
+.++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+. +++... . .|..+.+ ...+.+++.. .+.+|+
T Consensus 6 ~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~ 83 (257)
T PRK07067 6 GKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTRQD-SIDRIVAAAVERFGGIDI 83 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHH-HHHHHHHHHHHHcCCCCE
Confidence 578999987 9999999999988999 8999999888765543 343221 1 2222221 2333333221 136899
Q ss_pred EEEcccC
Q 018529 243 SVECTGN 249 (354)
Q Consensus 243 v~d~~g~ 249 (354)
++.+.|.
T Consensus 84 li~~ag~ 90 (257)
T PRK07067 84 LFNNAAL 90 (257)
T ss_pred EEECCCc
Confidence 9998763
No 358
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=95.76 E-value=0.14 Score=43.76 Aligned_cols=34 Identities=35% Similarity=0.416 Sum_probs=30.0
Q ss_pred CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529 170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 203 (354)
Q Consensus 170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~ 203 (354)
..+|+|+|+|++|...+..+-..|.++++.+|.+
T Consensus 21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D 54 (228)
T cd00757 21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDD 54 (228)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 4789999999999999999999999888888643
No 359
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.76 E-value=0.17 Score=43.91 Aligned_cols=78 Identities=17% Similarity=0.305 Sum_probs=46.8
Q ss_pred CCCeEEEEcC---ChhHHHHHHHHHHcCCcEEEEEcCCh---hhHHHH-Hhc-CCc-e--EEcCCCCChhHHHHHHHHcC
Q 018529 169 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSS---KRFEEA-KKF-GVT-D--FVNTSEHDRPIQEVIAEMTN 237 (354)
Q Consensus 169 ~~~~vlI~G~---g~~G~~a~~~a~~~g~~~vi~v~~~~---~~~~~~-~~l-g~~-~--v~~~~~~~~~~~~~i~~~~~ 237 (354)
.+++++|+|+ +++|.+.++.+...|+ +|+.+.++. ++.+.+ .++ +.. . ..|..+. ....+.+++...
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~ 83 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSD-EEITACFETIKE 83 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCH-HHHHHHHHHHHH
Confidence 4688999986 5999998888888999 788776543 333333 333 221 1 1233332 223333333322
Q ss_pred --CCccEEEEccc
Q 018529 238 --GGVDRSVECTG 248 (354)
Q Consensus 238 --~~~dvv~d~~g 248 (354)
+++|++++++|
T Consensus 84 ~~g~ld~lv~nag 96 (257)
T PRK08594 84 EVGVIHGVAHCIA 96 (257)
T ss_pred hCCCccEEEECcc
Confidence 47999999876
No 360
>PRK06198 short chain dehydrogenase; Provisional
Probab=95.75 E-value=0.07 Score=46.32 Aligned_cols=80 Identities=24% Similarity=0.302 Sum_probs=51.4
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHH----HHHhcCCce---EEcCCCCChhHHHHHHHHc--CC
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE----EAKKFGVTD---FVNTSEHDRPIQEVIAEMT--NG 238 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~----~~~~lg~~~---v~~~~~~~~~~~~~i~~~~--~~ 238 (354)
.+++++|+|+ |.+|...++.+...|++.|++++++.++.+ .+++.+... ..|..+.+ .+.+.+.... .+
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g 83 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVE-DCRRVVAAADEAFG 83 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHH-HHHHHHHHHHHHhC
Confidence 5688999987 999999999999999944999988876554 223344432 12333321 2223232221 13
Q ss_pred CccEEEEcccC
Q 018529 239 GVDRSVECTGN 249 (354)
Q Consensus 239 ~~dvv~d~~g~ 249 (354)
++|+++++.|.
T Consensus 84 ~id~li~~ag~ 94 (260)
T PRK06198 84 RLDALVNAAGL 94 (260)
T ss_pred CCCEEEECCCc
Confidence 69999999874
No 361
>PRK07577 short chain dehydrogenase; Provisional
Probab=95.75 E-value=0.057 Score=46.03 Aligned_cols=74 Identities=23% Similarity=0.281 Sum_probs=48.0
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCc-eEEcCCCCChhHHHHHHHHcCC-CccEEEE
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNG-GVDRSVE 245 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~-~v~~~~~~~~~~~~~i~~~~~~-~~dvv~d 245 (354)
+++++||+|+ |.+|...+..+...|. +|+++.++.++ .+... ...|..+.. .+.+.+.+.... +.|+++.
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~-----~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~d~vi~ 74 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAID-----DFPGELFACDLADIE-QTAATLAQINEIHPVDAIVN 74 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCccc-----ccCceEEEeeCCCHH-HHHHHHHHHHHhCCCcEEEE
Confidence 3578999987 9999999988888998 89888887654 12211 122333321 233334333333 6899999
Q ss_pred cccC
Q 018529 246 CTGN 249 (354)
Q Consensus 246 ~~g~ 249 (354)
+.|.
T Consensus 75 ~ag~ 78 (234)
T PRK07577 75 NVGI 78 (234)
T ss_pred CCCC
Confidence 8874
No 362
>PRK08219 short chain dehydrogenase; Provisional
Probab=95.75 E-value=0.12 Score=43.68 Aligned_cols=74 Identities=20% Similarity=0.227 Sum_probs=45.8
Q ss_pred CeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCceEEcCCCCChhHHHHHHHHcC--CCccEEEEc
Q 018529 171 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTN--GGVDRSVEC 246 (354)
Q Consensus 171 ~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~i~~~~~--~~~dvv~d~ 246 (354)
.++||+|+ |.+|...+..+... . +|++++++.++.+.+.+ +....++..+-.+. +.+.++.. ++.|.++.+
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~~~~~id~vi~~ 78 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVDLTDP---EAIAAAVEQLGRLDVLVHN 78 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecCCCCH---HHHHHHHHhcCCCCEEEEC
Confidence 57999987 99999877776666 6 89999998877655543 21112222211121 22332222 269999999
Q ss_pred ccC
Q 018529 247 TGN 249 (354)
Q Consensus 247 ~g~ 249 (354)
+|.
T Consensus 79 ag~ 81 (227)
T PRK08219 79 AGV 81 (227)
T ss_pred CCc
Confidence 874
No 363
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=95.72 E-value=0.58 Score=39.52 Aligned_cols=116 Identities=12% Similarity=0.057 Sum_probs=66.2
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh-hhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529 169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 247 (354)
Q Consensus 169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~ 247 (354)
++.+|||+|+|.++.-=+..+...|+ +|++++..- +..+.+.+.|.-..+ -.+.... .+ .++++||-++
T Consensus 24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA-~VtVVap~i~~el~~l~~~~~i~~~-~r~~~~~------dl--~g~~LViaAT 93 (223)
T PRK05562 24 NKIKVLIIGGGKAAFIKGKTFLKKGC-YVYILSKKFSKEFLDLKKYGNLKLI-KGNYDKE------FI--KDKHLIVIAT 93 (223)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCCCHHHHHHHhCCCEEEE-eCCCChH------Hh--CCCcEEEECC
Confidence 57799999999999988888888999 777774432 122222223322222 1221111 11 3689999999
Q ss_pred cChHhHHHHHHHhhCCCceEEEEcCCCCCceeecchhhhc-cccEEEEEe
Q 018529 248 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTF 296 (354)
Q Consensus 248 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~ 296 (354)
+.++.-+......+.. +.++..........+.+ +..+. ..+++.-+.
T Consensus 94 dD~~vN~~I~~~a~~~-~~lvn~vd~p~~~dFi~-PAiv~rg~l~IaIST 141 (223)
T PRK05562 94 DDEKLNNKIRKHCDRL-YKLYIDCSDYKKGLCII-PYQRSTKNFVFALNT 141 (223)
T ss_pred CCHHHHHHHHHHHHHc-CCeEEEcCCcccCeEEe-eeEEecCCEEEEEEC
Confidence 8855555555555564 67776654433333333 33233 345554443
No 364
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=95.72 E-value=0.13 Score=45.04 Aligned_cols=104 Identities=17% Similarity=0.180 Sum_probs=67.8
Q ss_pred hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCC--ceEEcCCCCChhHHHHHHHHcCC
Q 018529 161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--TDFVNTSEHDRPIQEVIAEMTNG 238 (354)
Q Consensus 161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~--~~v~~~~~~~~~~~~~i~~~~~~ 238 (354)
+....+++++.+||=+|+|. |..+..+++..+. +|++++.+++..+.+++... ..+ .....+ +.+ ..+..+
T Consensus 44 ~l~~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i-~~~~~D--~~~--~~~~~~ 116 (263)
T PTZ00098 44 ILSDIELNENSKVLDIGSGL-GGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKI-EFEAND--ILK--KDFPEN 116 (263)
T ss_pred HHHhCCCCCCCEEEEEcCCC-ChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCce-EEEECC--ccc--CCCCCC
Confidence 34567889999999999864 5566777777787 99999999988888776321 111 111111 110 011223
Q ss_pred CccEEEEc--c---c---ChHhHHHHHHHhhCCCceEEEEcC
Q 018529 239 GVDRSVEC--T---G---NIDNMISAFECVHDGWGVAVLVGV 272 (354)
Q Consensus 239 ~~dvv~d~--~---g---~~~~~~~~~~~l~~~~g~~v~~g~ 272 (354)
.||+|+.. . + ....+..+.+.|+|+ |++++...
T Consensus 117 ~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPG-G~lvi~d~ 157 (263)
T PTZ00098 117 TFDMIYSRDAILHLSYADKKKLFEKCYKWLKPN-GILLITDY 157 (263)
T ss_pred CeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCC-cEEEEEEe
Confidence 79999862 1 1 124677888999997 99987754
No 365
>PRK06940 short chain dehydrogenase; Provisional
Probab=95.72 E-value=0.21 Score=43.91 Aligned_cols=77 Identities=27% Similarity=0.385 Sum_probs=47.6
Q ss_pred CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-H---hcCCce-E--EcCCCCChhHHHHHHHHc-CCCcc
Q 018529 170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-K---KFGVTD-F--VNTSEHDRPIQEVIAEMT-NGGVD 241 (354)
Q Consensus 170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~---~lg~~~-v--~~~~~~~~~~~~~i~~~~-~~~~d 241 (354)
+++++|+|+|++|...+..+. .|. +|+.+++++++.+.+ + ..|... . .|..+.+ ++.+.+.+.. .+++|
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~-~i~~~~~~~~~~g~id 78 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRE-SVKALAATAQTLGPVT 78 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHH-HHHHHHHHHHhcCCCC
Confidence 357888899999999888774 788 888888887665433 2 224321 1 2333322 2333333221 24799
Q ss_pred EEEEcccC
Q 018529 242 RSVECTGN 249 (354)
Q Consensus 242 vv~d~~g~ 249 (354)
++++++|.
T Consensus 79 ~li~nAG~ 86 (275)
T PRK06940 79 GLVHTAGV 86 (275)
T ss_pred EEEECCCc
Confidence 99999874
No 366
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=95.71 E-value=0.094 Score=51.22 Aligned_cols=75 Identities=17% Similarity=0.240 Sum_probs=57.4
Q ss_pred CeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccCh
Q 018529 171 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI 250 (354)
Q Consensus 171 ~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~ 250 (354)
++++|.|.|.+|...++.++..|. .++++|.++++.+.+++.|...+.-. ..+ .+.+++..-+.+|.++-+++..
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~GD-~~~---~~~L~~a~i~~a~~viv~~~~~ 492 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLGN-AAN---EEIMQLAHLDCARWLLLTIPNG 492 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEcC-CCC---HHHHHhcCccccCEEEEEcCCh
Confidence 789999999999999999999998 89999999999999999887655432 222 2234444323789888777663
No 367
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=95.70 E-value=0.13 Score=44.23 Aligned_cols=103 Identities=18% Similarity=0.184 Sum_probs=68.5
Q ss_pred hcCCCCCCeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHc--
Q 018529 164 VAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT-- 236 (354)
Q Consensus 164 ~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~-- 236 (354)
..+....++||=+|.+ +|+.++.+|+.++. .+|+.++.+++..+.+++ .|...-+.....+ ..+.+.++.
T Consensus 74 l~~~~~ak~iLEiGT~-~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~G~--a~e~L~~l~~~ 150 (247)
T PLN02589 74 LLKLINAKNTMEIGVY-TGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGP--ALPVLDQMIED 150 (247)
T ss_pred HHHHhCCCEEEEEeCh-hhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEecc--HHHHHHHHHhc
Confidence 3444556788888873 68888889987742 289999999988777654 5653333333333 555555543
Q ss_pred ---CCCccEEEEccc---ChHhHHHHHHHhhCCCceEEEE
Q 018529 237 ---NGGVDRSVECTG---NIDNMISAFECVHDGWGVAVLV 270 (354)
Q Consensus 237 ---~~~~dvv~d~~g---~~~~~~~~~~~l~~~~g~~v~~ 270 (354)
.+.||.||--.. ....++.+++.|+++ |.++.=
T Consensus 151 ~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~G-Gviv~D 189 (247)
T PLN02589 151 GKYHGTFDFIFVDADKDNYINYHKRLIDLVKVG-GVIGYD 189 (247)
T ss_pred cccCCcccEEEecCCHHHhHHHHHHHHHhcCCC-eEEEEc
Confidence 247999974332 235678889999996 776643
No 368
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=95.70 E-value=0.12 Score=48.66 Aligned_cols=105 Identities=14% Similarity=0.223 Sum_probs=64.6
Q ss_pred hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH----hcCCce-EEcCCCCChhHHHHHHHHcC
Q 018529 163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHDRPIQEVIAEMTN 237 (354)
Q Consensus 163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~----~lg~~~-v~~~~~~~~~~~~~i~~~~~ 237 (354)
....+++|++||=+|+|+ |..++.++..++..+|++++.++++.+.++ ++|... +.....+...... . ...
T Consensus 232 ~~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~~~~~~-~--~~~ 307 (426)
T TIGR00563 232 TWLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDGRGPSQ-W--AEN 307 (426)
T ss_pred HHhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeccccccccc-c--ccc
Confidence 445778999999888754 555556666655339999999999987764 467652 2111111100000 0 012
Q ss_pred CCccEEEE---cccC-------------------------hHhHHHHHHHhhCCCceEEEEcC
Q 018529 238 GGVDRSVE---CTGN-------------------------IDNMISAFECVHDGWGVAVLVGV 272 (354)
Q Consensus 238 ~~~dvv~d---~~g~-------------------------~~~~~~~~~~l~~~~g~~v~~g~ 272 (354)
+.||.||- |+|. ...+..+++.|+++ |+++..-.
T Consensus 308 ~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~Lkpg-G~lvystc 369 (426)
T TIGR00563 308 EQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTG-GTLVYATC 369 (426)
T ss_pred cccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEeC
Confidence 36999974 3432 24677788899997 99886643
No 369
>PRK06125 short chain dehydrogenase; Provisional
Probab=95.69 E-value=0.14 Score=44.48 Aligned_cols=77 Identities=27% Similarity=0.390 Sum_probs=50.7
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-c----CCc-eE--EcCCCCChhHHHHHHHHcCCC
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F----GVT-DF--VNTSEHDRPIQEVIAEMTNGG 239 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-l----g~~-~v--~~~~~~~~~~~~~i~~~~~~~ 239 (354)
.++++||+|+ |++|...++.+...|+ +|+++++++++.+.+.+ + +.. .. .|..+. ..+.+.+... ++
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~-~~~~~~~~~~--g~ 81 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSSP-EAREQLAAEA--GD 81 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCH-HHHHHHHHHh--CC
Confidence 4689999987 9999999988888999 89999888876654322 2 321 12 222221 1233333322 47
Q ss_pred ccEEEEcccC
Q 018529 240 VDRSVECTGN 249 (354)
Q Consensus 240 ~dvv~d~~g~ 249 (354)
+|+++++.|.
T Consensus 82 id~lv~~ag~ 91 (259)
T PRK06125 82 IDILVNNAGA 91 (259)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 370
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=95.68 E-value=0.15 Score=44.23 Aligned_cols=95 Identities=24% Similarity=0.263 Sum_probs=61.8
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCc-eEEcCCCCChhHHHHHHHHcCCCccE
Q 018529 168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHDRPIQEVIAEMTNGGVDR 242 (354)
Q Consensus 168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~-~v~~~~~~~~~~~~~i~~~~~~~~dv 242 (354)
.++.+||-+|+|. |..+..+++. |. .|++++.+++..+.+++ .|.. .+. ....+ ..+ +.....+.+|+
T Consensus 43 ~~~~~vLDiGcG~-G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~-~~~~d--~~~-l~~~~~~~fD~ 115 (255)
T PRK11036 43 PRPLRVLDAGGGE-GQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQ-FIHCA--AQD-IAQHLETPVDL 115 (255)
T ss_pred CCCCEEEEeCCCc-hHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceE-EEEcC--HHH-HhhhcCCCCCE
Confidence 4567888888864 7778888875 76 99999999998887765 3321 111 11111 211 22233347999
Q ss_pred EEEccc-----C-hHhHHHHHHHhhCCCceEEEE
Q 018529 243 SVECTG-----N-IDNMISAFECVHDGWGVAVLV 270 (354)
Q Consensus 243 v~d~~g-----~-~~~~~~~~~~l~~~~g~~v~~ 270 (354)
|+.... . ...+..+.+.|+++ |+++++
T Consensus 116 V~~~~vl~~~~~~~~~l~~~~~~Lkpg-G~l~i~ 148 (255)
T PRK11036 116 ILFHAVLEWVADPKSVLQTLWSVLRPG-GALSLM 148 (255)
T ss_pred EEehhHHHhhCCHHHHHHHHHHHcCCC-eEEEEE
Confidence 986422 2 24578899999997 998765
No 371
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=95.68 E-value=0.073 Score=46.80 Aligned_cols=78 Identities=21% Similarity=0.293 Sum_probs=49.7
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-H---hcCCc-eE--EcCCCCChhHHHHHHHHc--CC
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-K---KFGVT-DF--VNTSEHDRPIQEVIAEMT--NG 238 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~---~lg~~-~v--~~~~~~~~~~~~~i~~~~--~~ 238 (354)
++.+++|+|+ |.+|...+..+...|+ +|+.+++++++.+.+ + +.+.. .. .|..+. .++.+.+.+.. -+
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~g 86 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDK-ESLEQARQQILEDFG 86 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCH-HHHHHHHHHHHHHcC
Confidence 4688999987 9999999998888999 888888887655433 2 22332 11 222221 12222233222 14
Q ss_pred CccEEEEccc
Q 018529 239 GVDRSVECTG 248 (354)
Q Consensus 239 ~~dvv~d~~g 248 (354)
++|+++.++|
T Consensus 87 ~id~li~~ag 96 (278)
T PRK08277 87 PCDILINGAG 96 (278)
T ss_pred CCCEEEECCC
Confidence 7999999987
No 372
>PRK06720 hypothetical protein; Provisional
Probab=95.67 E-value=0.13 Score=41.65 Aligned_cols=80 Identities=21% Similarity=0.177 Sum_probs=48.2
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce-EEcCCCCC-hhHHHHHHHHc--CCC
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMT--NGG 239 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v~~~~~~~-~~~~~~i~~~~--~~~ 239 (354)
++..++|+|+ +++|...+..+...|+ +|+.++++.++.+.. .+.+... .+..+-.+ ..+.+.+.+.. -++
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~ 93 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSR 93 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4778999987 8899998888888898 898888877654332 2234322 22222111 12222222211 146
Q ss_pred ccEEEEcccC
Q 018529 240 VDRSVECTGN 249 (354)
Q Consensus 240 ~dvv~d~~g~ 249 (354)
.|++++++|.
T Consensus 94 iDilVnnAG~ 103 (169)
T PRK06720 94 IDMLFQNAGL 103 (169)
T ss_pred CCEEEECCCc
Confidence 8888888764
No 373
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.67 E-value=0.093 Score=45.74 Aligned_cols=79 Identities=20% Similarity=0.313 Sum_probs=47.7
Q ss_pred CCCeEEEEcC---ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceE--EcCCCCChhHHHHHHHHcC--
Q 018529 169 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDF--VNTSEHDRPIQEVIAEMTN-- 237 (354)
Q Consensus 169 ~~~~vlI~G~---g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v--~~~~~~~~~~~~~i~~~~~-- 237 (354)
+++++||+|+ +++|.+.++.+...|+ +|+.+.++++..+.+++ ++.... .|..+. ++..+.+.+...
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~ 82 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVASD-DEINQVFADLGKHW 82 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCH-HHHHHHHHHHHHHh
Confidence 5678999984 5899998888888999 78777665433333333 343222 233322 223333333221
Q ss_pred CCccEEEEcccC
Q 018529 238 GGVDRSVECTGN 249 (354)
Q Consensus 238 ~~~dvv~d~~g~ 249 (354)
+++|++++++|.
T Consensus 83 g~iD~lVnnAG~ 94 (261)
T PRK08690 83 DGLDGLVHSIGF 94 (261)
T ss_pred CCCcEEEECCcc
Confidence 479999998864
No 374
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=95.66 E-value=0.064 Score=42.99 Aligned_cols=79 Identities=28% Similarity=0.344 Sum_probs=47.7
Q ss_pred CeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCC--hhhHHHH----HhcCCce-EEcCCCCC-hhHHHHHHHHc--CCC
Q 018529 171 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS--SKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMT--NGG 239 (354)
Q Consensus 171 ~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~--~~~~~~~----~~lg~~~-v~~~~~~~-~~~~~~i~~~~--~~~ 239 (354)
+++||+|+ +++|...++.+...|..+|+.+.++ .++.+.+ +..+... ++..+-.+ ..+.+.+.+.. .+.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 46899987 9999998777777777688888888 4433322 3345322 22211112 22333333332 237
Q ss_pred ccEEEEcccC
Q 018529 240 VDRSVECTGN 249 (354)
Q Consensus 240 ~dvv~d~~g~ 249 (354)
+|++|.+.|.
T Consensus 81 ld~li~~ag~ 90 (167)
T PF00106_consen 81 LDILINNAGI 90 (167)
T ss_dssp ESEEEEECSC
T ss_pred cccccccccc
Confidence 9999998885
No 375
>PRK06914 short chain dehydrogenase; Provisional
Probab=95.66 E-value=0.1 Score=45.94 Aligned_cols=78 Identities=17% Similarity=0.246 Sum_probs=49.7
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCC--c-eEE--cCCCCChhHHHHHHHHcC-
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGV--T-DFV--NTSEHDRPIQEVIAEMTN- 237 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~--~-~v~--~~~~~~~~~~~~i~~~~~- 237 (354)
.+.++||+|+ |.+|...+..+...|+ +|++++++.++.+.+.+ .+. . .++ |..+. ..+.+ +.+...
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~-~~~~~~~ 78 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQ-NSIHN-FQLVLKE 78 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCH-HHHHH-HHHHHHh
Confidence 3568999987 9999999988888899 88888888776554422 221 1 122 33322 12332 333221
Q ss_pred -CCccEEEEcccC
Q 018529 238 -GGVDRSVECTGN 249 (354)
Q Consensus 238 -~~~dvv~d~~g~ 249 (354)
+++|+++.++|.
T Consensus 79 ~~~id~vv~~ag~ 91 (280)
T PRK06914 79 IGRIDLLVNNAGY 91 (280)
T ss_pred cCCeeEEEECCcc
Confidence 378999999874
No 376
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=95.66 E-value=0.51 Score=33.89 Aligned_cols=85 Identities=21% Similarity=0.354 Sum_probs=52.9
Q ss_pred eEEEEcCChhHHHHHHHHHHcC---CcEEE-EEcCChhhHHHH-HhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529 172 SVAVFGLGAVGLAAAEGARIAG---ASRII-GVDRSSKRFEEA-KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 246 (354)
Q Consensus 172 ~vlI~G~g~~G~~a~~~a~~~g---~~~vi-~v~~~~~~~~~~-~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~ 246 (354)
+|.|+|+|.+|.+.+.-....| . +|+ +.++++++.+.+ ++++..... . + ..+.+++ .|+||-|
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~~~~-~-~----~~~~~~~-----advvila 68 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQATA-D-D----NEEAAQE-----ADVVILA 68 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTEEES-E-E----HHHHHHH-----TSEEEE-
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhcccccc-C-C----hHHhhcc-----CCEEEEE
Confidence 4678899999999888888888 5 677 548999988776 556643221 1 1 3333432 6999999
Q ss_pred ccChHhHHHHHHH---hhCCCceEEEE
Q 018529 247 TGNIDNMISAFEC---VHDGWGVAVLV 270 (354)
Q Consensus 247 ~g~~~~~~~~~~~---l~~~~g~~v~~ 270 (354)
+... .+...++. ..++ ..++.+
T Consensus 69 v~p~-~~~~v~~~i~~~~~~-~~vis~ 93 (96)
T PF03807_consen 69 VKPQ-QLPEVLSEIPHLLKG-KLVISI 93 (96)
T ss_dssp S-GG-GHHHHHHHHHHHHTT-SEEEEE
T ss_pred ECHH-HHHHHHHHHhhccCC-CEEEEe
Confidence 9764 33433333 4443 444443
No 377
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=95.65 E-value=0.049 Score=45.24 Aligned_cols=98 Identities=14% Similarity=0.107 Sum_probs=60.1
Q ss_pred hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHcCC
Q 018529 163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNG 238 (354)
Q Consensus 163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~~ 238 (354)
+.....++.+||-+|+|. |..+..+++ .|. .|+++|.+++..+.+++ .+..... ...+ +.+ . .. .+
T Consensus 24 ~~~~~~~~~~vLDiGcG~-G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~v~~--~~~d--~~~-~-~~-~~ 93 (195)
T TIGR00477 24 EAVKTVAPCKTLDLGCGQ-GRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLPLRT--DAYD--INA-A-AL-NE 93 (195)
T ss_pred HHhccCCCCcEEEeCCCC-CHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCCcee--Eecc--chh-c-cc-cC
Confidence 334445567899999864 777777776 477 99999999987776643 2332111 1111 100 0 11 23
Q ss_pred CccEEEEccc-----C---hHhHHHHHHHhhCCCceEEEEc
Q 018529 239 GVDRSVECTG-----N---IDNMISAFECVHDGWGVAVLVG 271 (354)
Q Consensus 239 ~~dvv~d~~g-----~---~~~~~~~~~~l~~~~g~~v~~g 271 (354)
.+|+|+.... . ...+..+.+.|+++ |.++++.
T Consensus 94 ~fD~I~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lli~~ 133 (195)
T TIGR00477 94 DYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPG-GYNLIVA 133 (195)
T ss_pred CCCEEEEecccccCCHHHHHHHHHHHHHHhCCC-cEEEEEE
Confidence 6999986421 1 24677888899997 9865554
No 378
>PRK06114 short chain dehydrogenase; Provisional
Probab=95.64 E-value=0.098 Score=45.29 Aligned_cols=79 Identities=20% Similarity=0.270 Sum_probs=48.7
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhh--HHH---HHhcCCce-EE--cCCCCChhHHHHHHHHc--C
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR--FEE---AKKFGVTD-FV--NTSEHDRPIQEVIAEMT--N 237 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~--~~~---~~~lg~~~-v~--~~~~~~~~~~~~i~~~~--~ 237 (354)
++.++||+|+ |++|...++.+...|+ +|+.++++.++ .+. +++.+... .+ |..+. ..+.+.+.+.. .
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~i~~~~~~~~~~~ 84 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSK-ADLRAAVARTEAEL 84 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCH-HHHHHHHHHHHHHc
Confidence 4678999987 9999999999988999 88888776432 222 23334321 12 22222 12333333322 1
Q ss_pred CCccEEEEcccC
Q 018529 238 GGVDRSVECTGN 249 (354)
Q Consensus 238 ~~~dvv~d~~g~ 249 (354)
+..|+++.+.|.
T Consensus 85 g~id~li~~ag~ 96 (254)
T PRK06114 85 GALTLAVNAAGI 96 (254)
T ss_pred CCCCEEEECCCC
Confidence 468999999874
No 379
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=95.64 E-value=0.12 Score=44.54 Aligned_cols=35 Identities=34% Similarity=0.457 Sum_probs=30.5
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529 169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 203 (354)
Q Consensus 169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~ 203 (354)
...+|+|+|+|++|..++..+...|.++++.+|.+
T Consensus 31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D 65 (245)
T PRK05690 31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFD 65 (245)
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 34789999999999999999999999888888754
No 380
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=95.64 E-value=0.1 Score=40.40 Aligned_cols=34 Identities=29% Similarity=0.443 Sum_probs=29.2
Q ss_pred CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529 170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 203 (354)
Q Consensus 170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~ 203 (354)
..+|+|+|+|++|...+..+-..|..+++.+|.+
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d 35 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDD 35 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESS
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCc
Confidence 4689999999999999999999999889988753
No 381
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.64 E-value=0.11 Score=45.69 Aligned_cols=79 Identities=15% Similarity=0.255 Sum_probs=49.5
Q ss_pred CCCeEEEEcC---ChhHHHHHHHHHHcCCcEEEEEcCChh---hHHHH-HhcCCceE--EcCCCCChhHHHHHHHHcC--
Q 018529 169 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSSK---RFEEA-KKFGVTDF--VNTSEHDRPIQEVIAEMTN-- 237 (354)
Q Consensus 169 ~~~~vlI~G~---g~~G~~a~~~a~~~g~~~vi~v~~~~~---~~~~~-~~lg~~~v--~~~~~~~~~~~~~i~~~~~-- 237 (354)
.++++||+|+ +++|.+.++.+...|+ +|+.++++++ +.+.+ ++++.... .|..+.+ .+.+.+.+...
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~i~~~~ 81 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPE-HFKSLAESLKKDL 81 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHH-HHHHHHHHHHHHc
Confidence 4689999986 4899998888888999 8888888753 22222 34453322 3443322 23333333222
Q ss_pred CCccEEEEcccC
Q 018529 238 GGVDRSVECTGN 249 (354)
Q Consensus 238 ~~~dvv~d~~g~ 249 (354)
+.+|++++++|.
T Consensus 82 g~iDilVnnAG~ 93 (274)
T PRK08415 82 GKIDFIVHSVAF 93 (274)
T ss_pred CCCCEEEECCcc
Confidence 479999999874
No 382
>PRK08251 short chain dehydrogenase; Provisional
Probab=95.63 E-value=0.09 Score=45.24 Aligned_cols=77 Identities=26% Similarity=0.459 Sum_probs=48.7
Q ss_pred CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----c--CCc-eE--EcCCCCChhHHHHHHHHcC--
Q 018529 170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----F--GVT-DF--VNTSEHDRPIQEVIAEMTN-- 237 (354)
Q Consensus 170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----l--g~~-~v--~~~~~~~~~~~~~i~~~~~-- 237 (354)
++++||+|+ |.+|...+..+...|. +|+.+++++++.+.+.+ . +.. .+ .|..+. ..+.+.+.++..
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~ 79 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDH-DQVFEVFAEFRDEL 79 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCH-HHHHHHHHHHHHHc
Confidence 468999987 9999988877777898 88888888876654422 1 221 12 233332 123333333221
Q ss_pred CCccEEEEccc
Q 018529 238 GGVDRSVECTG 248 (354)
Q Consensus 238 ~~~dvv~d~~g 248 (354)
++.|+++.++|
T Consensus 80 ~~id~vi~~ag 90 (248)
T PRK08251 80 GGLDRVIVNAG 90 (248)
T ss_pred CCCCEEEECCC
Confidence 37899999886
No 383
>PRK07074 short chain dehydrogenase; Provisional
Probab=95.63 E-value=0.091 Score=45.53 Aligned_cols=78 Identities=22% Similarity=0.311 Sum_probs=49.0
Q ss_pred CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcCCc--eE--EcCCCCChhHHHHHHHHc--CCCcc
Q 018529 170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVT--DF--VNTSEHDRPIQEVIAEMT--NGGVD 241 (354)
Q Consensus 170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~lg~~--~v--~~~~~~~~~~~~~i~~~~--~~~~d 241 (354)
++++||+|+ |.+|...+..+...|+ +|++++++.++.+.+. ++... .. .|..+.+ .+.+.+.+.. .+++|
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~~d 79 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTDAA-SLAAALANAAAERGPVD 79 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHH-HHHHHHHHHHHHcCCCC
Confidence 468999987 9999998888888898 8999988887765443 23211 12 2222211 1222333221 13689
Q ss_pred EEEEcccC
Q 018529 242 RSVECTGN 249 (354)
Q Consensus 242 vv~d~~g~ 249 (354)
+++.+.|.
T Consensus 80 ~vi~~ag~ 87 (257)
T PRK07074 80 VLVANAGA 87 (257)
T ss_pred EEEECCCC
Confidence 99999874
No 384
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.63 E-value=0.099 Score=45.57 Aligned_cols=80 Identities=21% Similarity=0.254 Sum_probs=50.7
Q ss_pred CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhh----HHHHHhcCC--ceEEcCCCCC--hhHHHHHHHHcCC
Q 018529 168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR----FEEAKKFGV--TDFVNTSEHD--RPIQEVIAEMTNG 238 (354)
Q Consensus 168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~----~~~~~~lg~--~~v~~~~~~~--~~~~~~i~~~~~~ 238 (354)
-+|+.|||+|+ +++|.+.++=.-.+|+ +++..|.+++. .+..++.|- .+..|..+.+ ....+++++-. |
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~-G 113 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEV-G 113 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhc-C
Confidence 46899999987 8999886666666777 77777766543 334444452 2344444432 22344444433 3
Q ss_pred CccEEEEcccC
Q 018529 239 GVDRSVECTGN 249 (354)
Q Consensus 239 ~~dvv~d~~g~ 249 (354)
.+|++++.+|.
T Consensus 114 ~V~ILVNNAGI 124 (300)
T KOG1201|consen 114 DVDILVNNAGI 124 (300)
T ss_pred CceEEEecccc
Confidence 78999998884
No 385
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=95.63 E-value=0.11 Score=44.98 Aligned_cols=79 Identities=22% Similarity=0.288 Sum_probs=48.5
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChh--hHHHHHhcCCce-E--EcCCCCChhHHHHHHHHc--CCCc
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK--RFEEAKKFGVTD-F--VNTSEHDRPIQEVIAEMT--NGGV 240 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~--~~~~~~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~~~ 240 (354)
.+.++||+|+ |++|.+.++.+...|+ +|+.+++++. ..+.+++++... . .|..+. .++.+.+.+.. .+++
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~~ 86 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRKI-DGIPALLERAVAEFGHI 86 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCCH-HHHHHHHHHHHHHhCCC
Confidence 3679999987 9999999999888999 8888765432 223344444321 1 222221 12323233221 1378
Q ss_pred cEEEEcccC
Q 018529 241 DRSVECTGN 249 (354)
Q Consensus 241 dvv~d~~g~ 249 (354)
|++++++|.
T Consensus 87 D~li~~Ag~ 95 (253)
T PRK08993 87 DILVNNAGL 95 (253)
T ss_pred CEEEECCCC
Confidence 999999874
No 386
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=95.63 E-value=0.095 Score=45.36 Aligned_cols=79 Identities=22% Similarity=0.321 Sum_probs=50.9
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce-E--EcCCCCChhHHHHHHHHcC--C
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMTN--G 238 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~i~~~~~--~ 238 (354)
++.+++|+|+ |.+|...+..+...|+ +|+.+++++++.+.+ ++.+... . .|..+. ..+.+.+.+... +
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~ 87 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADE-EAVAAAFARIDAEHG 87 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCH-HHHHHHHHHHHHhcC
Confidence 5789999987 9999998888888899 899998987665432 2334321 2 233222 123333333221 3
Q ss_pred CccEEEEcccC
Q 018529 239 GVDRSVECTGN 249 (354)
Q Consensus 239 ~~dvv~d~~g~ 249 (354)
++|+++.++|.
T Consensus 88 ~id~vi~~ag~ 98 (256)
T PRK06124 88 RLDILVNNVGA 98 (256)
T ss_pred CCCEEEECCCC
Confidence 68999998874
No 387
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=95.62 E-value=0.097 Score=46.89 Aligned_cols=90 Identities=17% Similarity=0.272 Sum_probs=59.8
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529 168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 247 (354)
Q Consensus 168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~ 247 (354)
-.|.+|.|+|.|.+|...++.++.+|. +|++.+++.++.+ +..... ... ++.+.++ ..|+|+.+.
T Consensus 134 l~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~~~~-----~~~~~~--~~~--~l~e~l~-----~aDvvv~~l 198 (312)
T PRK15469 134 REDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRKSWP-----GVQSFA--GRE--ELSAFLS-----QTRVLINLL 198 (312)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCCCCC-----Cceeec--ccc--cHHHHHh-----cCCEEEECC
Confidence 357899999999999999999999999 8999987654321 222111 111 1333332 379998887
Q ss_pred cChHh----H-HHHHHHhhCCCceEEEEcCC
Q 018529 248 GNIDN----M-ISAFECVHDGWGVAVLVGVP 273 (354)
Q Consensus 248 g~~~~----~-~~~~~~l~~~~g~~v~~g~~ 273 (354)
+..+. + ...++.|+++ ..++.++..
T Consensus 199 Plt~~T~~li~~~~l~~mk~g-a~lIN~aRG 228 (312)
T PRK15469 199 PNTPETVGIINQQLLEQLPDG-AYLLNLARG 228 (312)
T ss_pred CCCHHHHHHhHHHHHhcCCCC-cEEEECCCc
Confidence 64332 2 2466778886 888877754
No 388
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=95.62 E-value=0.094 Score=45.38 Aligned_cols=79 Identities=24% Similarity=0.355 Sum_probs=50.2
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-H---hcCCce-EE--cCCCCChhHHHHHHHHc--CC
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-K---KFGVTD-FV--NTSEHDRPIQEVIAEMT--NG 238 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~---~lg~~~-v~--~~~~~~~~~~~~i~~~~--~~ 238 (354)
.++++||+|+ |++|...+..+...|+ +|+.++++.++.+.+ . ..+... .+ |..+. ..+.+.+.... .+
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~ 85 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHK-QEVEAAIEHIEKDIG 85 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCH-HHHHHHHHHHHHhcC
Confidence 4678999987 9999999988888999 898998887665433 2 223221 22 22222 12222222221 13
Q ss_pred CccEEEEcccC
Q 018529 239 GVDRSVECTGN 249 (354)
Q Consensus 239 ~~dvv~d~~g~ 249 (354)
++|+++.+.|.
T Consensus 86 ~id~vi~~ag~ 96 (254)
T PRK08085 86 PIDVLINNAGI 96 (254)
T ss_pred CCCEEEECCCc
Confidence 68999999874
No 389
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=95.61 E-value=0.09 Score=45.07 Aligned_cols=79 Identities=22% Similarity=0.251 Sum_probs=50.2
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCc-eEE--cCCCCChhHHHHHHHHc--CCCcc
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVT-DFV--NTSEHDRPIQEVIAEMT--NGGVD 241 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~-~v~--~~~~~~~~~~~~i~~~~--~~~~d 241 (354)
++.++||+|+ |.+|...+..+...|+ .|+..+++.++.+.+ .+++.. .++ |..+. ..+.+.+.+.. -+++|
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~id 82 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSDR-DEVKALGQKAEADLEGVD 82 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCH-HHHHHHHHHHHHHcCCCC
Confidence 4679999987 9999998888888898 888887877766544 334432 122 22221 12222222221 13799
Q ss_pred EEEEcccC
Q 018529 242 RSVECTGN 249 (354)
Q Consensus 242 vv~d~~g~ 249 (354)
+++.++|.
T Consensus 83 ~vi~~ag~ 90 (245)
T PRK12936 83 ILVNNAGI 90 (245)
T ss_pred EEEECCCC
Confidence 99999874
No 390
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=95.61 E-value=0.099 Score=46.26 Aligned_cols=36 Identities=22% Similarity=0.407 Sum_probs=30.4
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529 169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS 204 (354)
Q Consensus 169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~ 204 (354)
+++++||+|+|+.+.+++..+...|+.+++++.|++
T Consensus 123 ~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~ 158 (288)
T PRK12749 123 KGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRD 158 (288)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 567999999998898777766678988999999985
No 391
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=95.61 E-value=0.099 Score=51.61 Aligned_cols=77 Identities=14% Similarity=0.277 Sum_probs=59.6
Q ss_pred CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccC
Q 018529 170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN 249 (354)
Q Consensus 170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~ 249 (354)
.++|+|.|.|.+|+..++.++..|. ++++++.++++.+.+++.|...++ -+..+. +.+++..-..+|.++-+++.
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~-GDat~~---~~L~~agi~~A~~vvv~~~d 474 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFY-GDATRM---DLLESAGAAKAEVLINAIDD 474 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEE-EeCCCH---HHHHhcCCCcCCEEEEEeCC
Confidence 4689999999999999999999998 899999999999999998875433 333332 23444433378999999887
Q ss_pred hH
Q 018529 250 ID 251 (354)
Q Consensus 250 ~~ 251 (354)
++
T Consensus 475 ~~ 476 (621)
T PRK03562 475 PQ 476 (621)
T ss_pred HH
Confidence 54
No 392
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=95.60 E-value=0.12 Score=42.88 Aligned_cols=34 Identities=18% Similarity=0.362 Sum_probs=30.1
Q ss_pred CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529 170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 203 (354)
Q Consensus 170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~ 203 (354)
..+|+|+|+|++|...+..+-..|.+++..+|.+
T Consensus 21 ~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d 54 (197)
T cd01492 21 SARILLIGLKGLGAEIAKNLVLSGIGSLTILDDR 54 (197)
T ss_pred hCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 4689999999999999999999999889888754
No 393
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.59 E-value=0.1 Score=42.49 Aligned_cols=33 Identities=24% Similarity=0.240 Sum_probs=29.3
Q ss_pred eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529 172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS 204 (354)
Q Consensus 172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~ 204 (354)
+|+|+|+|++|...++.+-..|.++++.+|.+.
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 489999999999999999999998899998765
No 394
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.57 E-value=0.085 Score=45.16 Aligned_cols=80 Identities=19% Similarity=0.355 Sum_probs=50.0
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce-EEcCCCCC-hhHHHHHHHHcC--CC
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMTN--GG 239 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v~~~~~~~-~~~~~~i~~~~~--~~ 239 (354)
.+.+++|+|+ |.+|...+..+...|+ .|+.++++.++.+.+ +..+... ++..+-.+ ..+.+.+++... ++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS 84 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3578999987 9999998888888999 899998887665433 2223221 22222222 123333333221 37
Q ss_pred ccEEEEcccC
Q 018529 240 VDRSVECTGN 249 (354)
Q Consensus 240 ~dvv~d~~g~ 249 (354)
+|++|.++|.
T Consensus 85 id~vi~~ag~ 94 (239)
T PRK07666 85 IDILINNAGI 94 (239)
T ss_pred ccEEEEcCcc
Confidence 8999998874
No 395
>PRK09242 tropinone reductase; Provisional
Probab=95.57 E-value=0.089 Score=45.61 Aligned_cols=79 Identities=19% Similarity=0.263 Sum_probs=50.9
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-c-----CCce-E--EcCCCCChhHHHHHHHHc--
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F-----GVTD-F--VNTSEHDRPIQEVIAEMT-- 236 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-l-----g~~~-v--~~~~~~~~~~~~~i~~~~-- 236 (354)
.++++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+.+ + +... . .|..+.+ .+.+.+.+..
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~ 85 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDE-DRRAILDWVEDH 85 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHH-HHHHHHHHHHHH
Confidence 4789999987 9999999999999999 89998888877654422 1 2221 1 2332221 2222222221
Q ss_pred CCCccEEEEcccC
Q 018529 237 NGGVDRSVECTGN 249 (354)
Q Consensus 237 ~~~~dvv~d~~g~ 249 (354)
-+++|+++.+.|.
T Consensus 86 ~g~id~li~~ag~ 98 (257)
T PRK09242 86 WDGLHILVNNAGG 98 (257)
T ss_pred cCCCCEEEECCCC
Confidence 1479999999874
No 396
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=95.56 E-value=0.14 Score=46.84 Aligned_cols=35 Identities=31% Similarity=0.356 Sum_probs=31.3
Q ss_pred CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh
Q 018529 170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS 204 (354)
Q Consensus 170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~ 204 (354)
..+|+|+|+|++|..+++.+-..|.++++.+|.+.
T Consensus 28 ~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ 62 (355)
T PRK05597 28 DAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT 62 (355)
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 47899999999999999999999999999998654
No 397
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=95.56 E-value=0.16 Score=38.70 Aligned_cols=92 Identities=24% Similarity=0.352 Sum_probs=49.5
Q ss_pred eEEEEcC-ChhHHHHHHHHHH-cCCcEEEEEcCChh-h--HHHHHhcCCc--eEEcCCCCChhHHHHHHHHcCCCccEEE
Q 018529 172 SVAVFGL-GAVGLAAAEGARI-AGASRIIGVDRSSK-R--FEEAKKFGVT--DFVNTSEHDRPIQEVIAEMTNGGVDRSV 244 (354)
Q Consensus 172 ~vlI~G~-g~~G~~a~~~a~~-~g~~~vi~v~~~~~-~--~~~~~~lg~~--~v~~~~~~~~~~~~~i~~~~~~~~dvv~ 244 (354)
+|.|+|+ |-+|...++.+.. -+.+-+-++++++. . .+.-.-.|.. .+..+. ++ .+... .+|+++
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~----~l----~~~~~-~~DVvI 72 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTD----DL----EELLE-EADVVI 72 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-----H----HHHTT-H-SEEE
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccch----hH----HHhcc-cCCEEE
Confidence 5889999 9999999999998 56644555555541 1 1111111111 111111 12 22222 289999
Q ss_pred EcccChHhHHHHHHHhhCCCceEEEEcCCC
Q 018529 245 ECTGNIDNMISAFECVHDGWGVAVLVGVPS 274 (354)
Q Consensus 245 d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~ 274 (354)
|++ .++.....++.+... |.-+.+|.+.
T Consensus 73 DfT-~p~~~~~~~~~~~~~-g~~~ViGTTG 100 (124)
T PF01113_consen 73 DFT-NPDAVYDNLEYALKH-GVPLVIGTTG 100 (124)
T ss_dssp EES--HHHHHHHHHHHHHH-T-EEEEE-SS
T ss_pred EcC-ChHHhHHHHHHHHhC-CCCEEEECCC
Confidence 998 556665555555554 6666677654
No 398
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=95.55 E-value=0.39 Score=41.58 Aligned_cols=98 Identities=14% Similarity=0.228 Sum_probs=63.3
Q ss_pred cCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCc-eEEcCCCCChhHHHHHHHHcCCCccEE
Q 018529 165 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNGGVDRS 243 (354)
Q Consensus 165 ~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~-~v~~~~~~~~~~~~~i~~~~~~~~dvv 243 (354)
....++++||-+|||. |..+..+++ .|. .|+++|.+++..+.+++.... ..+..+ +.+ + .+..+.||+|
T Consensus 38 l~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~~~D~s~~~l~~a~~~~~~~~~~~~d-----~~~-~-~~~~~~fD~V 107 (251)
T PRK10258 38 LPQRKFTHVLDAGCGP-GWMSRYWRE-RGS-QVTALDLSPPMLAQARQKDAADHYLAGD-----IES-L-PLATATFDLA 107 (251)
T ss_pred cCccCCCeEEEeeCCC-CHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCCCCCEEEcC-----ccc-C-cCCCCcEEEE
Confidence 3345678899999875 666666655 476 999999999999888775421 122111 100 0 0122369999
Q ss_pred EEccc------ChHhHHHHHHHhhCCCceEEEEcCC
Q 018529 244 VECTG------NIDNMISAFECVHDGWGVAVLVGVP 273 (354)
Q Consensus 244 ~d~~g------~~~~~~~~~~~l~~~~g~~v~~g~~ 273 (354)
+.... ....+..+.+.|+++ |.+++....
T Consensus 108 ~s~~~l~~~~d~~~~l~~~~~~Lk~g-G~l~~~~~~ 142 (251)
T PRK10258 108 WSNLAVQWCGNLSTALRELYRVVRPG-GVVAFTTLV 142 (251)
T ss_pred EECchhhhcCCHHHHHHHHHHHcCCC-eEEEEEeCC
Confidence 87532 124578888999997 998876543
No 399
>PRK04266 fibrillarin; Provisional
Probab=95.54 E-value=0.24 Score=42.18 Aligned_cols=101 Identities=17% Similarity=0.180 Sum_probs=61.9
Q ss_pred hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhc-----CCceEEcCCCCChhHHHHHHHHcC
Q 018529 163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-----GVTDFVNTSEHDRPIQEVIAEMTN 237 (354)
Q Consensus 163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~l-----g~~~v~~~~~~~~~~~~~i~~~~~ 237 (354)
+...+++|++||=+|+|. |..+..+++..+...|++++.+++..+.+.+. ++ ..+.-+..+ . .....+.
T Consensus 66 ~~l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv-~~i~~D~~~--~-~~~~~l~- 139 (226)
T PRK04266 66 KNFPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNI-IPILADARK--P-ERYAHVV- 139 (226)
T ss_pred hhCCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCc-EEEECCCCC--c-chhhhcc-
Confidence 356889999999888764 55566677766533899999999776644322 12 122111111 0 0001111
Q ss_pred CCccEEEEcccChH----hHHHHHHHhhCCCceEEEE
Q 018529 238 GGVDRSVECTGNID----NMISAFECVHDGWGVAVLV 270 (354)
Q Consensus 238 ~~~dvv~d~~g~~~----~~~~~~~~l~~~~g~~v~~ 270 (354)
..+|+|+.....+. .++.+.+.|+++ |++++.
T Consensus 140 ~~~D~i~~d~~~p~~~~~~L~~~~r~LKpG-G~lvI~ 175 (226)
T PRK04266 140 EKVDVIYQDVAQPNQAEIAIDNAEFFLKDG-GYLLLA 175 (226)
T ss_pred ccCCEEEECCCChhHHHHHHHHHHHhcCCC-cEEEEE
Confidence 25999996554322 367888899997 998874
No 400
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=95.54 E-value=0.025 Score=47.21 Aligned_cols=105 Identities=24% Similarity=0.294 Sum_probs=68.2
Q ss_pred cCCCCCCeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHcC--
Q 018529 165 AKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN-- 237 (354)
Q Consensus 165 ~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~-- 237 (354)
.+....++||-+|++ +|+.++.+|..+.- .+|+.++.++++.+.+++ .|...-+.....+ ..+.+.++.+
T Consensus 41 ~~~~~~k~vLEIGt~-~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~gd--a~~~l~~l~~~~ 117 (205)
T PF01596_consen 41 VRLTRPKRVLEIGTF-TGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIEGD--ALEVLPELANDG 117 (205)
T ss_dssp HHHHT-SEEEEESTT-TSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES---HHHHHHHHHHTT
T ss_pred HHhcCCceEEEeccc-cccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEec--cHhhHHHHHhcc
Confidence 334556789999975 48889999988742 299999999999888754 4653222222232 4455554432
Q ss_pred --CCccEEE-EcccC--hHhHHHHHHHhhCCCceEEEEcCC
Q 018529 238 --GGVDRSV-ECTGN--IDNMISAFECVHDGWGVAVLVGVP 273 (354)
Q Consensus 238 --~~~dvv~-d~~g~--~~~~~~~~~~l~~~~g~~v~~g~~ 273 (354)
+.||.|| |+.-. ...++.+++.|+++ |.++.=+..
T Consensus 118 ~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~g-gvii~DN~l 157 (205)
T PF01596_consen 118 EEGQFDFVFIDADKRNYLEYFEKALPLLRPG-GVIIADNVL 157 (205)
T ss_dssp TTTSEEEEEEESTGGGHHHHHHHHHHHEEEE-EEEEEETTT
T ss_pred CCCceeEEEEcccccchhhHHHHHhhhccCC-eEEEEcccc
Confidence 3699997 55322 24677888999996 777655443
No 401
>PRK08328 hypothetical protein; Provisional
Probab=95.53 E-value=0.085 Score=45.08 Aligned_cols=34 Identities=35% Similarity=0.488 Sum_probs=30.3
Q ss_pred CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529 170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 203 (354)
Q Consensus 170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~ 203 (354)
+.+|+|+|+|++|...+..+-..|.++++.+|.+
T Consensus 27 ~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D 60 (231)
T PRK08328 27 KAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQ 60 (231)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 4689999999999999999999999899888744
No 402
>PRK13243 glyoxylate reductase; Reviewed
Probab=95.51 E-value=0.12 Score=46.80 Aligned_cols=89 Identities=19% Similarity=0.249 Sum_probs=60.7
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529 169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 248 (354)
Q Consensus 169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g 248 (354)
.|.+|.|+|.|.+|...++.++.+|. +|++.+++.+.. ...+++... . + +.+.++ ..|+|+.+++
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~-~~~~~~~~~----~--~--l~ell~-----~aDiV~l~lP 213 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKPE-AEKELGAEY----R--P--LEELLR-----ESDFVSLHVP 213 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCChh-hHHHcCCEe----c--C--HHHHHh-----hCCEEEEeCC
Confidence 57899999999999999999999999 899998875443 233444321 1 1 333332 2688888876
Q ss_pred ChH----hH-HHHHHHhhCCCceEEEEcCC
Q 018529 249 NID----NM-ISAFECVHDGWGVAVLVGVP 273 (354)
Q Consensus 249 ~~~----~~-~~~~~~l~~~~g~~v~~g~~ 273 (354)
..+ .+ ...+..++++ ..++.++..
T Consensus 214 ~t~~T~~~i~~~~~~~mk~g-a~lIN~aRg 242 (333)
T PRK13243 214 LTKETYHMINEERLKLMKPT-AILVNTARG 242 (333)
T ss_pred CChHHhhccCHHHHhcCCCC-eEEEECcCc
Confidence 432 12 3566778886 777777654
No 403
>PRK07340 ornithine cyclodeaminase; Validated
Probab=95.51 E-value=0.07 Score=47.68 Aligned_cols=93 Identities=17% Similarity=0.109 Sum_probs=63.8
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHH-cCCcEEEEEcCChhhHHHH-HhcC---CceEEcCCCCChhHHHHHHHHcCCCccE
Q 018529 168 ERGSSVAVFGLGAVGLAAAEGARI-AGASRIIGVDRSSKRFEEA-KKFG---VTDFVNTSEHDRPIQEVIAEMTNGGVDR 242 (354)
Q Consensus 168 ~~~~~vlI~G~g~~G~~a~~~a~~-~g~~~vi~v~~~~~~~~~~-~~lg---~~~v~~~~~~~~~~~~~i~~~~~~~~dv 242 (354)
....+++|+|+|..|.+.+..+.. .+.++|.+.+++.++.+.+ .++. .... . .+ ..+.+ ..+|+
T Consensus 123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~--~--~~--~~~av-----~~aDi 191 (304)
T PRK07340 123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE--P--LD--GEAIP-----EAVDL 191 (304)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE--E--CC--HHHHh-----hcCCE
Confidence 456789999999999998888764 6777899999998876643 4443 2211 1 11 33333 25899
Q ss_pred EEEcccChHhHHHHHHHhhCCCceEEEEcCCC
Q 018529 243 SVECTGNIDNMISAFECVHDGWGVAVLVGVPS 274 (354)
Q Consensus 243 v~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~ 274 (354)
|+.|+++.+.+-..+ ++++ -.+..+|...
T Consensus 192 VitaT~s~~Pl~~~~--~~~g-~hi~~iGs~~ 220 (304)
T PRK07340 192 VVTATTSRTPVYPEA--ARAG-RLVVAVGAFT 220 (304)
T ss_pred EEEccCCCCceeCcc--CCCC-CEEEecCCCC
Confidence 999998765443333 6785 7888888654
No 404
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=95.50 E-value=0.11 Score=42.00 Aligned_cols=92 Identities=15% Similarity=0.316 Sum_probs=59.7
Q ss_pred eEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCC--ceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529 172 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--TDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 248 (354)
Q Consensus 172 ~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~--~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g 248 (354)
+|.|+|+ |-+|...++-|+..|. .|+++.|+++|....+.+.+ ..+++ ..+....+ .|+|+||++.|
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~~i~q~Difd-------~~~~a~~l--~g~DaVIsA~~ 71 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGVTILQKDIFD-------LTSLASDL--AGHDAVISAFG 71 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccceeecccccC-------hhhhHhhh--cCCceEEEecc
Confidence 5788887 9999999999999998 99999999998866432221 01222 11111122 37999999887
Q ss_pred Ch---------HhHHHHHHHhhCC-CceEEEEcCC
Q 018529 249 NI---------DNMISAFECVHDG-WGVAVLVGVP 273 (354)
Q Consensus 249 ~~---------~~~~~~~~~l~~~-~g~~v~~g~~ 273 (354)
.. ...+.++..|+.- -.|+..+|..
T Consensus 72 ~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGA 106 (211)
T COG2910 72 AGASDNDELHSKSIEALIEALKGAGVPRLLVVGGA 106 (211)
T ss_pred CCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCc
Confidence 53 1233456666652 1467777653
No 405
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=95.50 E-value=0.2 Score=43.19 Aligned_cols=74 Identities=26% Similarity=0.350 Sum_probs=46.6
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCc-eE--EcCCCCChhHHHHHHHHcC--CCccE
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DF--VNTSEHDRPIQEVIAEMTN--GGVDR 242 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~-~v--~~~~~~~~~~~~~i~~~~~--~~~dv 242 (354)
+++++||+|+ |.+|...+..+...|+ +|++++++. +...+.. .. .|..+. ..+.+.+.+... +.+|+
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~id~ 79 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSDA-AAVAQVCQRLLAETGPLDV 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCCH-HHHHHHHHHHHHHcCCCCE
Confidence 4678999987 9999999998888899 888887775 2222221 11 222221 123333333221 36899
Q ss_pred EEEcccC
Q 018529 243 SVECTGN 249 (354)
Q Consensus 243 v~d~~g~ 249 (354)
++.+.|.
T Consensus 80 vi~~ag~ 86 (252)
T PRK08220 80 LVNAAGI 86 (252)
T ss_pred EEECCCc
Confidence 9999875
No 406
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.49 E-value=0.37 Score=41.47 Aligned_cols=102 Identities=17% Similarity=0.159 Sum_probs=58.6
Q ss_pred CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcC-ChhhH----HHHHhcCCce-E--EcCCCCChhHHHHHHHHcC--C
Q 018529 170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRF----EEAKKFGVTD-F--VNTSEHDRPIQEVIAEMTN--G 238 (354)
Q Consensus 170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~-~~~~~----~~~~~lg~~~-v--~~~~~~~~~~~~~i~~~~~--~ 238 (354)
+.++||+|+ |.+|...+..+...|+ +|+.+.+ +.++. ..+++.+... . .|..+.+ .+...+++... +
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~ 83 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTRE-GCETLAKATIDRYG 83 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHH-HHHHHHHHHHHHcC
Confidence 578999987 9999998888888999 6655543 32222 2233344321 2 2332221 22222222211 3
Q ss_pred CccEEEEcccCh----------H---------------hHHHHHHHhhCCCceEEEEcCCC
Q 018529 239 GVDRSVECTGNI----------D---------------NMISAFECVHDGWGVAVLVGVPS 274 (354)
Q Consensus 239 ~~dvv~d~~g~~----------~---------------~~~~~~~~l~~~~g~~v~~g~~~ 274 (354)
++|++|.++|.. + ..+.+.+.++.. |++++++...
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~sS~~ 143 (252)
T PRK06077 84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG-GAIVNIASVA 143 (252)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC-cEEEEEcchh
Confidence 789999998730 0 123345555675 8999888643
No 407
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=95.49 E-value=0.094 Score=45.09 Aligned_cols=80 Identities=23% Similarity=0.237 Sum_probs=48.7
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHH----HHhcCCc-eEEcCCCCC-hhHHHHHHHHcC--CC
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE----AKKFGVT-DFVNTSEHD-RPIQEVIAEMTN--GG 239 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~----~~~lg~~-~v~~~~~~~-~~~~~~i~~~~~--~~ 239 (354)
.+.++||+|+ |.+|...+..+...|+ +|++++++.++... +++.+.. .++..+-.+ ..+.+.+.+... +.
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR 83 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 4578999987 9999998888888898 89999888654432 2333322 122111111 122232322211 36
Q ss_pred ccEEEEcccC
Q 018529 240 VDRSVECTGN 249 (354)
Q Consensus 240 ~dvv~d~~g~ 249 (354)
+|+|+.++|.
T Consensus 84 ~d~vi~~ag~ 93 (251)
T PRK12826 84 LDILVANAGI 93 (251)
T ss_pred CCEEEECCCC
Confidence 8999998764
No 408
>PRK08223 hypothetical protein; Validated
Probab=95.48 E-value=0.15 Score=44.66 Aligned_cols=35 Identities=31% Similarity=0.304 Sum_probs=30.9
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529 169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 203 (354)
Q Consensus 169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~ 203 (354)
...+|+|+|+|++|..+++.+-..|.+++..+|.+
T Consensus 26 ~~s~VlIvG~GGLGs~va~~LA~aGVG~i~lvD~D 60 (287)
T PRK08223 26 RNSRVAIAGLGGVGGIHLLTLARLGIGKFTIADFD 60 (287)
T ss_pred hcCCEEEECCCHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 35789999999999999999999999999888754
No 409
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=95.48 E-value=0.13 Score=44.59 Aligned_cols=78 Identities=18% Similarity=0.210 Sum_probs=48.5
Q ss_pred CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-h----cCCc--eEE--cCCCCChhHHHHHHHHc--C
Q 018529 170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-K----FGVT--DFV--NTSEHDRPIQEVIAEMT--N 237 (354)
Q Consensus 170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~----lg~~--~v~--~~~~~~~~~~~~i~~~~--~ 237 (354)
++++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+. + .+.. ..+ |..+. .++.+.+.+.. .
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~i~~~~~~~~~~~ 79 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSE-QSVLALSRGVDEIF 79 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCH-HHHHHHHHHHHHHc
Confidence 468999987 9999998888888899 8888988876554332 1 2211 122 22221 12222232221 1
Q ss_pred CCccEEEEcccC
Q 018529 238 GGVDRSVECTGN 249 (354)
Q Consensus 238 ~~~dvv~d~~g~ 249 (354)
+++|++++++|.
T Consensus 80 ~~id~vv~~ag~ 91 (259)
T PRK12384 80 GRVDLLVYNAGI 91 (259)
T ss_pred CCCCEEEECCCc
Confidence 478999998873
No 410
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.47 E-value=0.096 Score=45.46 Aligned_cols=79 Identities=27% Similarity=0.290 Sum_probs=48.1
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHH---HHHhcCCc-eE--EcCCCCChhHHHHHHHHc--CCC
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE---EAKKFGVT-DF--VNTSEHDRPIQEVIAEMT--NGG 239 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~---~~~~lg~~-~v--~~~~~~~~~~~~~i~~~~--~~~ 239 (354)
.+.++||+|+ |.+|...++.+...|+ +|+++.++++..+ .+.+.+.. .. .|..+.+ .+.+.+.+.. .++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~i~~~~~~~~~~~g~ 91 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPE-SAEKVVKEALEEFGK 91 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHHcCC
Confidence 4789999987 9999999999888999 8888877632222 22233432 12 2332221 2222233221 136
Q ss_pred ccEEEEcccC
Q 018529 240 VDRSVECTGN 249 (354)
Q Consensus 240 ~dvv~d~~g~ 249 (354)
+|+++.+.|.
T Consensus 92 id~li~~ag~ 101 (258)
T PRK06935 92 IDILVNNAGT 101 (258)
T ss_pred CCEEEECCCC
Confidence 8999998874
No 411
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=95.47 E-value=0.092 Score=45.32 Aligned_cols=77 Identities=29% Similarity=0.373 Sum_probs=49.2
Q ss_pred CeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCce-EE--cCCCCChhHHHHHHHHc--CCCc
Q 018529 171 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FV--NTSEHDRPIQEVIAEMT--NGGV 240 (354)
Q Consensus 171 ~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~-v~--~~~~~~~~~~~~i~~~~--~~~~ 240 (354)
.++||+|+ |.+|...+..+...|+ +|++++++.++.+.+.+ .+... .+ |..+. ..+.+.+++.. .++.
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~~ 79 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKE-DEIADMIAAAAAEFGGL 79 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCH-HHHHHHHHHHHHhcCCC
Confidence 57999987 9999999988888899 89999998877655433 23221 12 22221 12333222221 1368
Q ss_pred cEEEEcccC
Q 018529 241 DRSVECTGN 249 (354)
Q Consensus 241 dvv~d~~g~ 249 (354)
|+||.+.+.
T Consensus 80 d~vi~~a~~ 88 (255)
T TIGR01963 80 DILVNNAGI 88 (255)
T ss_pred CEEEECCCC
Confidence 999988764
No 412
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=95.46 E-value=0.037 Score=47.49 Aligned_cols=108 Identities=22% Similarity=0.223 Sum_probs=65.8
Q ss_pred hhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHH-HHHHH
Q 018529 161 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQ-EVIAE 234 (354)
Q Consensus 161 l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~-~~i~~ 234 (354)
+....+++||++|+=-|.|+ |.++..+++..|. .+|+..+..+++.+.+++ +|....+.....| +. +...+
T Consensus 32 I~~~l~i~pG~~VlEaGtGS-G~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~D--v~~~g~~~ 108 (247)
T PF08704_consen 32 ILMRLDIRPGSRVLEAGTGS-GSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRD--VCEEGFDE 108 (247)
T ss_dssp HHHHTT--TT-EEEEE--TT-SHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES---GGCG--ST
T ss_pred HHHHcCCCCCCEEEEecCCc-HHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecc--eecccccc
Confidence 45678999999999887653 6777788887763 399999999999888754 5653211111111 11 11111
Q ss_pred HcCCCccEEEEcccCh-HhHHHHHHHh-hCCCceEEEEcC
Q 018529 235 MTNGGVDRSVECTGNI-DNMISAFECV-HDGWGVAVLVGV 272 (354)
Q Consensus 235 ~~~~~~dvv~d~~g~~-~~~~~~~~~l-~~~~g~~v~~g~ 272 (354)
-.+..+|.||-=.+.| ..+..+.+.| +++ |+++.+.-
T Consensus 109 ~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~g-G~i~~fsP 147 (247)
T PF08704_consen 109 ELESDFDAVFLDLPDPWEAIPHAKRALKKPG-GRICCFSP 147 (247)
T ss_dssp T-TTSEEEEEEESSSGGGGHHHHHHHE-EEE-EEEEEEES
T ss_pred cccCcccEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECC
Confidence 1123689887544444 5789999999 786 99988853
No 413
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=95.44 E-value=0.2 Score=44.27 Aligned_cols=95 Identities=18% Similarity=0.186 Sum_probs=56.4
Q ss_pred CeEEEEcCChhHHHHH-HHHHHcCCcEEEEEcCChh--hHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529 171 SSVAVFGLGAVGLAAA-EGARIAGASRIIGVDRSSK--RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 247 (354)
Q Consensus 171 ~~vlI~G~g~~G~~a~-~~a~~~g~~~vi~v~~~~~--~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~ 247 (354)
-++.|+|+|.+|...+ .+.+.-+.+-+.+++.+++ .+++++++|..... .+ +.+.+....-..+|+||+++
T Consensus 5 lrVAIIGtG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A~~~Gi~~~~--~~----ie~LL~~~~~~dIDiVf~AT 78 (302)
T PRK08300 5 LKVAIIGSGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARARRLGVATSA--EG----IDGLLAMPEFDDIDIVFDAT 78 (302)
T ss_pred CeEEEEcCcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHHHcCCCccc--CC----HHHHHhCcCCCCCCEEEECC
Confidence 4689999999998744 4444445533444445554 44677888864322 11 33333221013699999999
Q ss_pred cChHhHHHHHHHhhCCCceEEEEcCC
Q 018529 248 GNIDNMISAFECVHDGWGVAVLVGVP 273 (354)
Q Consensus 248 g~~~~~~~~~~~l~~~~g~~v~~g~~ 273 (354)
+...+.+.+.+++.. |..++...+
T Consensus 79 ~a~~H~e~a~~a~ea--Gk~VID~sP 102 (302)
T PRK08300 79 SAGAHVRHAAKLREA--GIRAIDLTP 102 (302)
T ss_pred CHHHHHHHHHHHHHc--CCeEEECCc
Confidence 986666666666555 566655544
No 414
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase. MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.
Probab=95.41 E-value=0.19 Score=42.93 Aligned_cols=105 Identities=16% Similarity=0.229 Sum_probs=66.4
Q ss_pred hhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHc
Q 018529 162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT 236 (354)
Q Consensus 162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~ 236 (354)
.....++++++||=+|+|. |..+..+++..+. ..|++++.+++..+.+++ .+.+.+-.... + ..+ + .+.
T Consensus 38 l~~l~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~-d--~~~-~-~~~ 111 (231)
T TIGR02752 38 MKRMNVQAGTSALDVCCGT-ADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHG-N--AME-L-PFD 111 (231)
T ss_pred HHhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEe-c--hhc-C-CCC
Confidence 3456778899999999864 6677788887642 289999999988777654 23322211111 1 100 0 112
Q ss_pred CCCccEEEEccc------ChHhHHHHHHHhhCCCceEEEEcCC
Q 018529 237 NGGVDRSVECTG------NIDNMISAFECVHDGWGVAVLVGVP 273 (354)
Q Consensus 237 ~~~~dvv~d~~g------~~~~~~~~~~~l~~~~g~~v~~g~~ 273 (354)
.+.+|+|+-... ....++.+.+.|+++ |++++....
T Consensus 112 ~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~g-G~l~~~~~~ 153 (231)
T TIGR02752 112 DNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPG-GKVVCLETS 153 (231)
T ss_pred CCCccEEEEecccccCCCHHHHHHHHHHHcCcC-eEEEEEECC
Confidence 237999975422 124577888999997 999876543
No 415
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.40 E-value=0.15 Score=44.97 Aligned_cols=94 Identities=19% Similarity=0.244 Sum_probs=65.2
Q ss_pred hcccchhhhhhhhhhhcCC-CCCCeEEEEc-CChhHHHHHHHHHHcCCcEEEEEc-CChhhHHHHHhcCCceEEcCCCCC
Q 018529 149 ILSCGVSTGLGATLNVAKP-ERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVD-RSSKRFEEAKKFGVTDFVNTSEHD 225 (354)
Q Consensus 149 ~l~~~~~~a~~~l~~~~~~-~~~~~vlI~G-~g~~G~~a~~~a~~~g~~~vi~v~-~~~~~~~~~~~lg~~~v~~~~~~~ 225 (354)
.+||+....+.. ++..++ -.|++|+|+| ++.+|.-.+.++...|+ .|++.. ++.+
T Consensus 137 ~~PcTp~ai~~l-l~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~-tVtv~~~rT~~-------------------- 194 (296)
T PRK14188 137 LVPCTPLGCMML-LRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANA-TVTIAHSRTRD-------------------- 194 (296)
T ss_pred CcCCCHHHHHHH-HHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCC-EEEEECCCCCC--------------------
Confidence 456554444433 344443 5799999999 59999999999999999 888773 3321
Q ss_pred hhHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCC
Q 018529 226 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 274 (354)
Q Consensus 226 ~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~ 274 (354)
+.+.++ ..|+|+-++|.+..++..+ ++++ ..++.+|...
T Consensus 195 --l~e~~~-----~ADIVIsavg~~~~v~~~~--lk~G-avVIDvGin~ 233 (296)
T PRK14188 195 --LPAVCR-----RADILVAAVGRPEMVKGDW--IKPG-ATVIDVGINR 233 (296)
T ss_pred --HHHHHh-----cCCEEEEecCChhhcchhe--ecCC-CEEEEcCCcc
Confidence 222221 3799999999987776655 8886 8888888653
No 416
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=95.40 E-value=0.25 Score=45.19 Aligned_cols=97 Identities=16% Similarity=0.312 Sum_probs=63.5
Q ss_pred CeEEEEcC-ChhHHHHHHHHHHc--CCcEEEEEc--CChhh-HHHHHhcCCceEEcCCCCC-hhHHH-------------
Q 018529 171 SSVAVFGL-GAVGLAAAEGARIA--GASRIIGVD--RSSKR-FEEAKKFGVTDFVNTSEHD-RPIQE------------- 230 (354)
Q Consensus 171 ~~vlI~G~-g~~G~~a~~~a~~~--g~~~vi~v~--~~~~~-~~~~~~lg~~~v~~~~~~~-~~~~~------------- 230 (354)
++|.|+|+ |++|..++...+.. .. +|+++. ++.++ .+++++++...+...++.. ..+.+
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f-~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~ 80 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRF-RVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGE 80 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCcccc-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEECh
Confidence 57899996 99999999988765 45 677774 34433 3456778887766544321 11111
Q ss_pred -HHHHHcCC-CccEEEEcccChHhHHHHHHHhhCCCceEEE
Q 018529 231 -VIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVL 269 (354)
Q Consensus 231 -~i~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~ 269 (354)
.+.++... .+|+|+.++++...+.-.+.+++.+ -++.+
T Consensus 81 ~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aG-K~VaL 120 (385)
T PRK05447 81 EGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAG-KRIAL 120 (385)
T ss_pred hHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCC-CcEEE
Confidence 22222233 6899999998877888889999874 44443
No 417
>PRK12746 short chain dehydrogenase; Provisional
Probab=95.39 E-value=0.32 Score=41.98 Aligned_cols=79 Identities=18% Similarity=0.265 Sum_probs=47.1
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEE-EcCChhhHHHH-Hhc---CCce-E--EcCCCCChhHHHHHHHHc---
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIG-VDRSSKRFEEA-KKF---GVTD-F--VNTSEHDRPIQEVIAEMT--- 236 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~-v~~~~~~~~~~-~~l---g~~~-v--~~~~~~~~~~~~~i~~~~--- 236 (354)
.+.+++|+|+ |.+|...++.+...|+ +|+. ..++.++.+.+ .++ +... + .|..+. ..+.+.+++..
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~-~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~i~~~~~~~~~~~ 82 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGA-LVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSI-DGVKKLVEQLKNEL 82 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCH-HHHHHHHHHHHHHh
Confidence 3578999987 9999999988888898 6655 45666554322 222 2221 2 233322 12333333321
Q ss_pred ----C-CCccEEEEcccC
Q 018529 237 ----N-GGVDRSVECTGN 249 (354)
Q Consensus 237 ----~-~~~dvv~d~~g~ 249 (354)
. +++|++|.++|.
T Consensus 83 ~~~~~~~~id~vi~~ag~ 100 (254)
T PRK12746 83 QIRVGTSEIDILVNNAGI 100 (254)
T ss_pred ccccCCCCccEEEECCCC
Confidence 1 268999998874
No 418
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=95.39 E-value=0.29 Score=41.32 Aligned_cols=102 Identities=19% Similarity=0.286 Sum_probs=60.6
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh------hh-------------HHHHH----hcCCc-eEEcCCCC
Q 018529 169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS------KR-------------FEEAK----KFGVT-DFVNTSEH 224 (354)
Q Consensus 169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~------~~-------------~~~~~----~lg~~-~v~~~~~~ 224 (354)
+..+|+|+|.|++|.+++..+-..|..++..+|-+. +| .+.++ +.+.. +|....+.
T Consensus 29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f 108 (263)
T COG1179 29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDF 108 (263)
T ss_pred hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhh
Confidence 357899999999999999999999998888886433 11 11111 11221 11111111
Q ss_pred ChhHHHHHHHHcCCCccEEEEcccChHhHHHH-HHHhhCCCceEEEEcCC
Q 018529 225 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISA-FECVHDGWGVAVLVGVP 273 (354)
Q Consensus 225 ~~~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~-~~~l~~~~g~~v~~g~~ 273 (354)
--.+.+.++..+++|.|+||.-+-..--.+ ..|...+ -.++..+..
T Consensus 109 --~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~k-i~vIss~Ga 155 (263)
T COG1179 109 --ITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNK-IPVISSMGA 155 (263)
T ss_pred --hCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcC-CCEEeeccc
Confidence 022345556666899999998654433333 3355554 556655443
No 419
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=95.39 E-value=0.14 Score=50.37 Aligned_cols=78 Identities=14% Similarity=0.207 Sum_probs=60.1
Q ss_pred CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccC
Q 018529 170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN 249 (354)
Q Consensus 170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~ 249 (354)
.++|+|.|.|.+|...++.++..|. .++++|.++++.+.+++.|...++ -+..+ .+.+++..-+.+|.++-+++.
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~-GDat~---~~~L~~agi~~A~~vv~~~~d 474 (601)
T PRK03659 400 KPQVIIVGFGRFGQVIGRLLMANKM-RITVLERDISAVNLMRKYGYKVYY-GDATQ---LELLRAAGAEKAEAIVITCNE 474 (601)
T ss_pred cCCEEEecCchHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhCCCeEEE-eeCCC---HHHHHhcCCccCCEEEEEeCC
Confidence 3689999999999999999999998 899999999999999998875443 23222 233444433378999999988
Q ss_pred hHh
Q 018529 250 IDN 252 (354)
Q Consensus 250 ~~~ 252 (354)
++.
T Consensus 475 ~~~ 477 (601)
T PRK03659 475 PED 477 (601)
T ss_pred HHH
Confidence 543
No 420
>TIGR00452 methyltransferase, putative. Known examples to date are restricted to the proteobacteria.
Probab=95.38 E-value=0.17 Score=45.28 Aligned_cols=101 Identities=16% Similarity=0.173 Sum_probs=62.9
Q ss_pred hhhhhhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHH---HHhc-CC---ceEEcCCCCChhHHH
Q 018529 158 LGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE---AKKF-GV---TDFVNTSEHDRPIQE 230 (354)
Q Consensus 158 ~~~l~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~---~~~l-g~---~~v~~~~~~~~~~~~ 230 (354)
|..+.......+|++||=+|||. |..+..++.. |+..|++++.++.-... ++++ +. ..+... +
T Consensus 110 ~~~~l~~l~~~~g~~VLDvGCG~-G~~~~~~~~~-g~~~v~GiDpS~~ml~q~~~~~~~~~~~~~v~~~~~---~----- 179 (314)
T TIGR00452 110 WDRVLPHLSPLKGRTILDVGCGS-GYHMWRMLGH-GAKSLVGIDPTVLFLCQFEAVRKLLDNDKRAILEPL---G----- 179 (314)
T ss_pred HHHHHHhcCCCCCCEEEEeccCC-cHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHHHHHhccCCCeEEEEC---C-----
Confidence 33444555677889999999976 7777666654 66689999988854332 2222 21 112111 1
Q ss_pred HHHHHcC-CCccEEEEcc-----cCh-HhHHHHHHHhhCCCceEEEE
Q 018529 231 VIAEMTN-GGVDRSVECT-----GNI-DNMISAFECVHDGWGVAVLV 270 (354)
Q Consensus 231 ~i~~~~~-~~~dvv~d~~-----g~~-~~~~~~~~~l~~~~g~~v~~ 270 (354)
+.++.. ..||+|+... ..+ ..+..+.+.|+++ |++++-
T Consensus 180 -ie~lp~~~~FD~V~s~gvL~H~~dp~~~L~el~r~LkpG-G~Lvle 224 (314)
T TIGR00452 180 -IEQLHELYAFDTVFSMGVLYHRKSPLEHLKQLKHQLVIK-GELVLE 224 (314)
T ss_pred -HHHCCCCCCcCEEEEcchhhccCCHHHHHHHHHHhcCCC-CEEEEE
Confidence 122222 2799998642 122 5788899999997 998864
No 421
>PLN02928 oxidoreductase family protein
Probab=95.37 E-value=0.13 Score=46.76 Aligned_cols=97 Identities=23% Similarity=0.283 Sum_probs=60.5
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcC----C-ceEEcCCCCChhHHHHHHHHcCCCccEE
Q 018529 169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG----V-TDFVNTSEHDRPIQEVIAEMTNGGVDRS 243 (354)
Q Consensus 169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg----~-~~v~~~~~~~~~~~~~i~~~~~~~~dvv 243 (354)
.|.++.|+|.|.+|...++.++.+|. +|++.+++..+... ..++ . ...........++.+.+++ .|+|
T Consensus 158 ~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~L~ell~~-----aDiV 230 (347)
T PLN02928 158 FGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSWTSEPE-DGLLIPNGDVDDLVDEKGGHEDIYEFAGE-----ADIV 230 (347)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCCChhhh-hhhccccccccccccccCcccCHHHHHhh-----CCEE
Confidence 57899999999999999999999999 99999876432211 1111 0 0000000000114443333 6999
Q ss_pred EEcccChH----h-HHHHHHHhhCCCceEEEEcCC
Q 018529 244 VECTGNID----N-MISAFECVHDGWGVAVLVGVP 273 (354)
Q Consensus 244 ~d~~g~~~----~-~~~~~~~l~~~~g~~v~~g~~ 273 (354)
+.+++... . -...+..|+++ ..+|.++..
T Consensus 231 vl~lPlt~~T~~li~~~~l~~Mk~g-a~lINvaRG 264 (347)
T PLN02928 231 VLCCTLTKETAGIVNDEFLSSMKKG-ALLVNIARG 264 (347)
T ss_pred EECCCCChHhhcccCHHHHhcCCCC-eEEEECCCc
Confidence 98876322 1 23577788886 888877754
No 422
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.35 E-value=0.17 Score=48.41 Aligned_cols=71 Identities=28% Similarity=0.295 Sum_probs=49.4
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChh-----hHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccE
Q 018529 168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK-----RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDR 242 (354)
Q Consensus 168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~-----~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dv 242 (354)
..+++|+|+|+|.+|+.++.+++..|. .|++++.+++ ..+.+++.|+......... . ..++|+
T Consensus 14 ~~~~~v~viG~G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~----------~-~~~~D~ 81 (480)
T PRK01438 14 WQGLRVVVAGLGVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGPGPT----------L-PEDTDL 81 (480)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc----------c-cCCCCE
Confidence 356789999999999999999999999 8888875542 2344666787544322111 0 125788
Q ss_pred EEEcccCh
Q 018529 243 SVECTGNI 250 (354)
Q Consensus 243 v~d~~g~~ 250 (354)
|+.+.|.+
T Consensus 82 Vv~s~Gi~ 89 (480)
T PRK01438 82 VVTSPGWR 89 (480)
T ss_pred EEECCCcC
Confidence 88887753
No 423
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.35 E-value=0.17 Score=44.56 Aligned_cols=77 Identities=21% Similarity=0.230 Sum_probs=54.7
Q ss_pred CCCCCeEEEEcCCh-hHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEE
Q 018529 167 PERGSSVAVFGLGA-VGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE 245 (354)
Q Consensus 167 ~~~~~~vlI~G~g~-~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d 245 (354)
.-.|++++|+|.|. +|...+.++...|+ .|+.+.+..+. +.+.+ ..+|+|+.
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t~~---------------------L~~~~-----~~aDIvI~ 208 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRTQN---------------------LPELV-----KQADIIVG 208 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCchh---------------------HHHHh-----ccCCEEEE
Confidence 35788999999976 99999999999999 88887542111 22212 25899999
Q ss_pred cccChHhHHHHHHHhhCCCceEEEEcCC
Q 018529 246 CTGNIDNMISAFECVHDGWGVAVLVGVP 273 (354)
Q Consensus 246 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~ 273 (354)
++|.+..+. .+.++++ ..++.++..
T Consensus 209 AtG~~~~v~--~~~lk~g-avViDvg~n 233 (283)
T PRK14192 209 AVGKPELIK--KDWIKQG-AVVVDAGFH 233 (283)
T ss_pred ccCCCCcCC--HHHcCCC-CEEEEEEEe
Confidence 998766433 3457885 777777654
No 424
>PRK06101 short chain dehydrogenase; Provisional
Probab=95.34 E-value=0.18 Score=43.19 Aligned_cols=75 Identities=13% Similarity=0.162 Sum_probs=47.9
Q ss_pred CeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCC--c-eEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529 171 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--T-DFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 246 (354)
Q Consensus 171 ~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~--~-~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~ 246 (354)
.+++|+|+ |++|...+..+...|+ +|+++++++++.+.+.+.+. . ...|..+. .++.+.+++.. ...|.++.+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~-~~~d~~i~~ 78 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQSANIFTLAFDVTDH-PGTKAALSQLP-FIPELWIFN 78 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCCCeEEEeeCCCH-HHHHHHHHhcc-cCCCEEEEc
Confidence 46899987 9999988877778899 89999999888776654332 1 12233332 23444444432 245776666
Q ss_pred cc
Q 018529 247 TG 248 (354)
Q Consensus 247 ~g 248 (354)
+|
T Consensus 79 ag 80 (240)
T PRK06101 79 AG 80 (240)
T ss_pred Cc
Confidence 54
No 425
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.32 E-value=0.18 Score=44.33 Aligned_cols=81 Identities=21% Similarity=0.316 Sum_probs=48.8
Q ss_pred CCCCCeEEEEcC---ChhHHHHHHHHHHcCCcEEEEEcCCh---hhHHHH-HhcCCceE--EcCCCCChhHHHHHHHHcC
Q 018529 167 PERGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSS---KRFEEA-KKFGVTDF--VNTSEHDRPIQEVIAEMTN 237 (354)
Q Consensus 167 ~~~~~~vlI~G~---g~~G~~a~~~a~~~g~~~vi~v~~~~---~~~~~~-~~lg~~~v--~~~~~~~~~~~~~i~~~~~ 237 (354)
+-.++++||+|+ +++|.+.+..+...|+ +|+.+.+++ ++.+.+ ++++.... .|..+. .+..+.+.++..
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~ 84 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDE-ASIDAVFETLEK 84 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCH-HHHHHHHHHHHH
Confidence 345789999986 5899998888888999 787776654 233322 33453222 233222 123333333222
Q ss_pred --CCccEEEEcccC
Q 018529 238 --GGVDRSVECTGN 249 (354)
Q Consensus 238 --~~~dvv~d~~g~ 249 (354)
+.+|++++++|.
T Consensus 85 ~~g~iD~lv~nAG~ 98 (272)
T PRK08159 85 KWGKLDFVVHAIGF 98 (272)
T ss_pred hcCCCcEEEECCcc
Confidence 478999998863
No 426
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=95.32 E-value=0.12 Score=44.75 Aligned_cols=79 Identities=18% Similarity=0.235 Sum_probs=50.4
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce-E--EcCCCCChhHHHHHHHHc--CC
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMT--NG 238 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~ 238 (354)
.+.++||+|+ |.+|...+..+...|+ +++.++++.++.+.+ ++.+... . .|..+.+ .+.+.++... .+
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~i~~~~~~~~~~~~ 87 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQ-ELSALADFALSKLG 87 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHH-HHHHHHHHHHHHcC
Confidence 4789999987 9999999988888999 788888877765443 2233321 2 2333221 2223333221 13
Q ss_pred CccEEEEcccC
Q 018529 239 GVDRSVECTGN 249 (354)
Q Consensus 239 ~~dvv~d~~g~ 249 (354)
++|+++.++|.
T Consensus 88 ~~d~li~~ag~ 98 (255)
T PRK06113 88 KVDILVNNAGG 98 (255)
T ss_pred CCCEEEECCCC
Confidence 68999998873
No 427
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=95.27 E-value=0.14 Score=44.67 Aligned_cols=79 Identities=22% Similarity=0.379 Sum_probs=49.8
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce-E--EcCCCCChhHHHHHHHHcC--C
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMTN--G 238 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~i~~~~~--~ 238 (354)
.+.++||+|+ |.+|...+..+...|+ +|+.+++++++.+.+ ++.+... . .|..+.. .+.+.+.+... +
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~ 86 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDED-GVQAMVSQIEKEVG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHhCC
Confidence 5678999987 9999988888888899 788888887765433 2334322 1 2332221 12222222211 3
Q ss_pred CccEEEEcccC
Q 018529 239 GVDRSVECTGN 249 (354)
Q Consensus 239 ~~dvv~d~~g~ 249 (354)
++|+++.++|.
T Consensus 87 ~id~li~~ag~ 97 (265)
T PRK07097 87 VIDILVNNAGI 97 (265)
T ss_pred CCCEEEECCCC
Confidence 68999999874
No 428
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=95.27 E-value=0.0095 Score=47.19 Aligned_cols=97 Identities=21% Similarity=0.171 Sum_probs=57.5
Q ss_pred EEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCC----ChhHHHHHHHHcCCCccEEEEccc
Q 018529 173 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH----DRPIQEVIAEMTNGGVDRSVECTG 248 (354)
Q Consensus 173 vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~----~~~~~~~i~~~~~~~~dvv~d~~g 248 (354)
|+|+|+|++|.+.+..++..|. .|..+.+.+ +.+.+++-|........+. ....... ....+.+|+||-|+-
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~viv~vK 76 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP--SADAGPYDLVIVAVK 76 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH--GHHHSTESEEEE-SS
T ss_pred CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc--hhccCCCcEEEEEec
Confidence 6899999999998888877888 899998888 7777776554221111000 0000000 111247999999986
Q ss_pred ChHh---HHHHHHHhhCCCceEEEEcCCC
Q 018529 249 NIDN---MISAFECVHDGWGVAVLVGVPS 274 (354)
Q Consensus 249 ~~~~---~~~~~~~l~~~~g~~v~~g~~~ 274 (354)
..+. ++.+...+.++ ..++++.+..
T Consensus 77 a~~~~~~l~~l~~~~~~~-t~iv~~qNG~ 104 (151)
T PF02558_consen 77 AYQLEQALQSLKPYLDPN-TTIVSLQNGM 104 (151)
T ss_dssp GGGHHHHHHHHCTGEETT-EEEEEESSSS
T ss_pred ccchHHHHHHHhhccCCC-cEEEEEeCCC
Confidence 5333 23333344554 6777776653
No 429
>PRK11088 rrmA 23S rRNA methyltransferase A; Provisional
Probab=95.27 E-value=0.35 Score=42.50 Aligned_cols=95 Identities=19% Similarity=0.226 Sum_probs=61.3
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHcCC---cEEEEEcCChhhHHHHHhcCCc-eEEcCCCCChhHHHHHHHHcCCCccEE
Q 018529 168 ERGSSVAVFGLGAVGLAAAEGARIAGA---SRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNGGVDRS 243 (354)
Q Consensus 168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~---~~vi~v~~~~~~~~~~~~lg~~-~v~~~~~~~~~~~~~i~~~~~~~~dvv 243 (354)
.+.++||=+|+|. |..+..+++.... ..+++++.+++..+.+++.... ..+..+..+ + .+..+.+|+|
T Consensus 84 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~~~~~v~giD~s~~~l~~A~~~~~~~~~~~~d~~~--l-----p~~~~sfD~I 155 (272)
T PRK11088 84 EKATALLDIGCGE-GYYTHALADALPEITTMQLFGLDISKVAIKYAAKRYPQVTFCVASSHR--L-----PFADQSLDAI 155 (272)
T ss_pred CCCCeEEEECCcC-CHHHHHHHHhcccccCCeEEEECCCHHHHHHHHHhCCCCeEEEeeccc--C-----CCcCCceeEE
Confidence 3456778789864 6777777765431 2799999999988888664321 111111110 0 0112369999
Q ss_pred EEcccChHhHHHHHHHhhCCCceEEEEcC
Q 018529 244 VECTGNIDNMISAFECVHDGWGVAVLVGV 272 (354)
Q Consensus 244 ~d~~g~~~~~~~~~~~l~~~~g~~v~~g~ 272 (354)
+.... +.......+.|+++ |+++.+..
T Consensus 156 ~~~~~-~~~~~e~~rvLkpg-G~li~~~p 182 (272)
T PRK11088 156 IRIYA-PCKAEELARVVKPG-GIVITVTP 182 (272)
T ss_pred EEecC-CCCHHHHHhhccCC-CEEEEEeC
Confidence 97654 46778899999997 99987743
No 430
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=95.24 E-value=0.21 Score=41.60 Aligned_cols=34 Identities=35% Similarity=0.476 Sum_probs=30.7
Q ss_pred CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529 170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 203 (354)
Q Consensus 170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~ 203 (354)
..+|+|+|+|++|...++.+-..|.++++.+|.+
T Consensus 21 ~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 21 QATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 4679999999999999999999999889999877
No 431
>PF01564 Spermine_synth: Spermine/spermidine synthase; InterPro: IPR001045 Synonym(s): Spermidine aminopropyltransferase A group of polyamine biosynthetic enzymes involved in the fifth (last) step in the biosynthesis of spermidine from arginine and methionine which includes; spermidine synthase (2.5.1.16 from EC), spermine synthase (2.5.1.22 from EC) and putrescine N-methyltransferase (2.1.1.53 from EC) []. The Thermotoga maritima spermidine synthase monomer consists of two domains: an N-terminal domain composed of six beta-strands, and a Rossmann-like C- terminal domain []. The larger C-terminal catalytic core domain consists of a seven-stranded beta-sheet flanked by nine alpha helices. This domain resembles a topology observed in a number of nucleotide and dinucleotide-binding enzymes, and in S-adenosyl-L-methionine (AdoMet)- dependent methyltransferase (MTases) [].; GO: 0003824 catalytic activity; PDB: 2E5W_C 2ZSU_E 2O0L_B 2O05_B 2O06_B 2O07_B 3RW9_B 2PWP_A 2HTE_B 3RIE_B ....
Probab=95.24 E-value=0.034 Score=48.02 Aligned_cols=96 Identities=19% Similarity=0.150 Sum_probs=64.1
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCC--------c--eEEcCCCCChhHHHHHHHHcCC
Q 018529 169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--------T--DFVNTSEHDRPIQEVIAEMTNG 238 (354)
Q Consensus 169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~--------~--~v~~~~~~~~~~~~~i~~~~~~ 238 (354)
..++|||+|+|. |..+-.+++.....+|.+++.+++-.+.++++-. . +++. . +..+.+++...+
T Consensus 76 ~p~~VLiiGgG~-G~~~~ell~~~~~~~i~~VEiD~~Vv~~a~~~f~~~~~~~~d~r~~i~~-~----Dg~~~l~~~~~~ 149 (246)
T PF01564_consen 76 NPKRVLIIGGGD-GGTARELLKHPPVESITVVEIDPEVVELARKYFPEFSEGLDDPRVRIII-G----DGRKFLKETQEE 149 (246)
T ss_dssp ST-EEEEEESTT-SHHHHHHTTSTT-SEEEEEES-HHHHHHHHHHTHHHHTTGGSTTEEEEE-S----THHHHHHTSSST
T ss_pred CcCceEEEcCCC-hhhhhhhhhcCCcceEEEEecChHHHHHHHHhchhhccccCCCceEEEE-h----hhHHHHHhccCC
Confidence 679999998755 5556677777766699999999999888877421 0 1221 1 255556664433
Q ss_pred CccEEE-Eccc---------ChHhHHHHHHHhhCCCceEEEEc
Q 018529 239 GVDRSV-ECTG---------NIDNMISAFECVHDGWGVAVLVG 271 (354)
Q Consensus 239 ~~dvv~-d~~g---------~~~~~~~~~~~l~~~~g~~v~~g 271 (354)
.+|+|+ |... +.+.++.+.++|+++ |.++.-.
T Consensus 150 ~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~~-Gv~v~~~ 191 (246)
T PF01564_consen 150 KYDVIIVDLTDPDGPAPNLFTREFYQLCKRRLKPD-GVLVLQA 191 (246)
T ss_dssp -EEEEEEESSSTTSCGGGGSSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred cccEEEEeCCCCCCCcccccCHHHHHHHHhhcCCC-cEEEEEc
Confidence 799997 5443 247788999999998 9888664
No 432
>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only]
Probab=95.23 E-value=0.53 Score=42.68 Aligned_cols=135 Identities=20% Similarity=0.255 Sum_probs=79.9
Q ss_pred eEEEEcCChhH-HHHHHHHHHcC--CcEEEEEcCChhhHH-HHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529 172 SVAVFGLGAVG-LAAAEGARIAG--ASRIIGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 247 (354)
Q Consensus 172 ~vlI~G~g~~G-~~a~~~a~~~g--~~~vi~v~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~ 247 (354)
+|.|+|+|.++ ...+..++..+ ...+-++++++++.+ +++++|.... +.+ +.+.++. ..+|+|+.++
T Consensus 5 rvgiiG~G~~~~~~~~~~~~~~~~~~~~vav~d~~~~~a~~~a~~~~~~~~--~~~----~~~ll~~---~~iD~V~Iat 75 (342)
T COG0673 5 RVGIIGAGGIAGKAHLPALAALGGGLELVAVVDRDPERAEAFAEEFGIAKA--YTD----LEELLAD---PDIDAVYIAT 75 (342)
T ss_pred EEEEEcccHHHHHHhHHHHHhCCCceEEEEEecCCHHHHHHHHHHcCCCcc--cCC----HHHHhcC---CCCCEEEEcC
Confidence 67889997554 45666666655 435555678888755 5677887622 222 3222221 2599999999
Q ss_pred cChHhHHHHHHHhhCCCceEEEEcCCCCCceeecc-hhhhc--cccEEEEEeccCCCCCCCHHHHHHHHHccCCC
Q 018529 248 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE 319 (354)
Q Consensus 248 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~-~~~~~--~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (354)
....+.+.+.++|.. |+=|++.-+.....-... ..... +++.+.-.+ +.+....++++-+++.+|.+.
T Consensus 76 p~~~H~e~~~~AL~a--GkhVl~EKPla~t~~ea~~l~~~a~~~~~~l~v~~--~~Rf~p~~~~~k~li~~g~lG 146 (342)
T COG0673 76 PNALHAELALAALEA--GKHVLCEKPLALTLEEAEELVELARKAGVKLMVGF--NRRFDPAVQALKELIDSGALG 146 (342)
T ss_pred CChhhHHHHHHHHhc--CCEEEEcCCCCCCHHHHHHHHHHHHHcCCceeeeh--hhhcCHHHHHHHHHHhcCCcC
Confidence 998889999999988 677888755421111111 11111 223332222 122234578888888888553
No 433
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=95.23 E-value=0.11 Score=44.35 Aligned_cols=71 Identities=21% Similarity=0.285 Sum_probs=49.8
Q ss_pred EEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChh--hHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccC
Q 018529 173 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK--RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN 249 (354)
Q Consensus 173 vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~--~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~ 249 (354)
|+|+|+ |.+|...++.+...+. +|.++.|+.. ....++..|+..+ ..+-.+ .+.+.+... |+|.||.+++.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~-~V~~l~R~~~~~~~~~l~~~g~~vv-~~d~~~---~~~l~~al~-g~d~v~~~~~~ 74 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF-SVRALVRDPSSDRAQQLQALGAEVV-EADYDD---PESLVAALK-GVDAVFSVTPP 74 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG-CEEEEESSSHHHHHHHHHHTTTEEE-ES-TT----HHHHHHHHT-TCSEEEEESSC
T ss_pred CEEECCccHHHHHHHHHHHhCCC-CcEEEEeccchhhhhhhhcccceEe-ecccCC---HHHHHHHHc-CCceEEeecCc
Confidence 789998 9999999999999887 8888888763 4556677888654 332222 233333332 79999998883
No 434
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.23 E-value=0.19 Score=43.80 Aligned_cols=78 Identities=19% Similarity=0.284 Sum_probs=46.8
Q ss_pred CCCeEEEEcC-C--hhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceE--EcCCCCChhHHHHHHHHcC--
Q 018529 169 RGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDF--VNTSEHDRPIQEVIAEMTN-- 237 (354)
Q Consensus 169 ~~~~vlI~G~-g--~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v--~~~~~~~~~~~~~i~~~~~-- 237 (354)
.++++||+|+ + ++|.+.++.+...|+ +|+.++++++..+.+++ .+.... .|..+. .++.+.+.+...
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~ 82 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAED-ASIDAMFAELGKVW 82 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCCH-HHHHHHHHHHHhhc
Confidence 4688999987 3 799998888888899 78887776422223322 232222 233332 123333333222
Q ss_pred CCccEEEEccc
Q 018529 238 GGVDRSVECTG 248 (354)
Q Consensus 238 ~~~dvv~d~~g 248 (354)
+.+|++++++|
T Consensus 83 g~iD~linnAg 93 (262)
T PRK07984 83 PKFDGFVHSIG 93 (262)
T ss_pred CCCCEEEECCc
Confidence 46899999987
No 435
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=95.23 E-value=0.051 Score=49.61 Aligned_cols=75 Identities=13% Similarity=0.106 Sum_probs=47.4
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcC----CceE-EcCCCCChhHHHHHHHHcCC-Cc
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFG----VTDF-VNTSEHDRPIQEVIAEMTNG-GV 240 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg----~~~v-~~~~~~~~~~~~~i~~~~~~-~~ 240 (354)
++.+|||+|+ |.+|...++.+...|. +|++++++++..... +.++ ...+ .|..+. +.+.++..+ ++
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-----~~~~~~~~~~~~ 76 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDA-----AKLRKAIAEFKP 76 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEccCCCH-----HHHHHHHhhcCC
Confidence 4678999987 9999999999999998 888888766543221 2222 1111 122221 223333333 68
Q ss_pred cEEEEcccC
Q 018529 241 DRSVECTGN 249 (354)
Q Consensus 241 dvv~d~~g~ 249 (354)
|+||.+++.
T Consensus 77 d~vih~A~~ 85 (349)
T TIGR02622 77 EIVFHLAAQ 85 (349)
T ss_pred CEEEECCcc
Confidence 999999873
No 436
>smart00846 Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain. GAPDH is a tetrameric NAD-binding enzyme involved in glycolysis and glyconeogenesis. N-terminal domain is a Rossmann NAD(P) binding fold.
Probab=95.23 E-value=0.37 Score=38.01 Aligned_cols=102 Identities=23% Similarity=0.367 Sum_probs=58.2
Q ss_pred eEEEEcCChhHHHHHHHHHH-cCCcEEEEE-c-CChhhHHHHHh----cCCc-eEEcCCCCC-----h--hH--HHHHHH
Q 018529 172 SVAVFGLGAVGLAAAEGARI-AGASRIIGV-D-RSSKRFEEAKK----FGVT-DFVNTSEHD-----R--PI--QEVIAE 234 (354)
Q Consensus 172 ~vlI~G~g~~G~~a~~~a~~-~g~~~vi~v-~-~~~~~~~~~~~----lg~~-~v~~~~~~~-----~--~~--~~~i~~ 234 (354)
+|.|+|.|.+|...++.+.. .+. .++++ + .+.+...++-+ .|.. .-+..++.. + .+ .....+
T Consensus 2 kv~I~G~GriGr~v~~~~~~~~~~-~lvai~d~~~~~~~a~ll~~Ds~hg~~~~~v~~~~~~l~i~g~~i~~~~~~~p~~ 80 (149)
T smart00846 2 KVGINGFGRIGRLVLRALLERPDI-EVVAINDLTDPETLAHLLKYDSVHGRFPGEVEVDEDGLIVNGKKIKVLAERDPAN 80 (149)
T ss_pred EEEEECcCHHHHHHHHHHHhCCCC-EEEEeecCCCHHHHHHHhcccCCCCCCCCcEEEeCCEEEECCEEEEEEecCChHH
Confidence 57899999999988887774 455 44444 4 24455555533 2221 001111100 0 00 001222
Q ss_pred HcCC--CccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCCC
Q 018529 235 MTNG--GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK 275 (354)
Q Consensus 235 ~~~~--~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~ 275 (354)
+..+ ++|+|+||+|.-...+.+...+..+ .+-|+++.+..
T Consensus 81 ~~w~~~gvDiVie~tG~f~~~~~~~~hl~~G-akkViisap~~ 122 (149)
T smart00846 81 LPWKELGVDIVVECTGKFTTREKASAHLKAG-AKKVIISAPAK 122 (149)
T ss_pred CcccccCCeEEEeccccccchHHHHHHHHcC-CCEEEeCCCCC
Confidence 2222 8999999998755666777788875 77777876653
No 437
>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase. Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.
Probab=95.22 E-value=0.24 Score=44.52 Aligned_cols=101 Identities=19% Similarity=0.272 Sum_probs=61.8
Q ss_pred eEEEEcCChhHHHHHHHHHHcC----CcEEEEEcC--ChhhHHHHHhcCCc--------------eEEcCCCCChhHHHH
Q 018529 172 SVAVFGLGAVGLAAAEGARIAG----ASRIIGVDR--SSKRFEEAKKFGVT--------------DFVNTSEHDRPIQEV 231 (354)
Q Consensus 172 ~vlI~G~g~~G~~a~~~a~~~g----~~~vi~v~~--~~~~~~~~~~lg~~--------------~v~~~~~~~~~~~~~ 231 (354)
+|.|.|.|.+|...++.+...+ . .|+++.. +.+...++.++... .+++.+...---...
T Consensus 1 ~IaInGfGrIGR~vlr~l~e~~~~~~~-~vvaInd~~~~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~ 79 (325)
T TIGR01532 1 RVAINGFGRIGRNVLRALYESGERLGI-EVVALNELADQASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPT 79 (325)
T ss_pred CEEEECCCHHHHHHHHHHHhcCCCCCe-EEEEEecCCCHHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeEEEEEEcCC
Confidence 4789999999999999888653 4 6666632 33444555443210 011110000000001
Q ss_pred HHHHcC--CCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCC
Q 018529 232 IAEMTN--GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 274 (354)
Q Consensus 232 i~~~~~--~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~ 274 (354)
..++.. .++|+||+|+|.....+.+...+..+ ++.|.++.+.
T Consensus 80 p~~~~w~~~gvDiVie~tG~~~s~e~a~~~l~aG-a~~V~~SaP~ 123 (325)
T TIGR01532 80 PEALPWRALGVDLVLDCTGVYGNREQGERHIRAG-AKRVLFSHPG 123 (325)
T ss_pred hhhccccccCCCEEEEccchhccHHHHHHHHHcC-CeEEEecCCC
Confidence 222232 28999999999977788888999986 8888888663
No 438
>PRK03612 spermidine synthase; Provisional
Probab=95.22 E-value=0.19 Score=48.46 Aligned_cols=98 Identities=16% Similarity=0.122 Sum_probs=63.9
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcC-C----------ceEEcCCCCChhHHHHHHHHc
Q 018529 168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG-V----------TDFVNTSEHDRPIQEVIAEMT 236 (354)
Q Consensus 168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg-~----------~~v~~~~~~~~~~~~~i~~~~ 236 (354)
++.++||++|+| .|..+..+++.-+..+|++++.+++-.+.+++.. . .++ ..... |..+.+++.
T Consensus 296 ~~~~rVL~IG~G-~G~~~~~ll~~~~v~~v~~VEid~~vi~~ar~~~~l~~~~~~~~~dprv-~vi~~--Da~~~l~~~- 370 (521)
T PRK03612 296 ARPRRVLVLGGG-DGLALREVLKYPDVEQVTLVDLDPAMTELARTSPALRALNGGALDDPRV-TVVND--DAFNWLRKL- 370 (521)
T ss_pred CCCCeEEEEcCC-ccHHHHHHHhCCCcCeEEEEECCHHHHHHHHhCCcchhhhccccCCCce-EEEEC--hHHHHHHhC-
Confidence 556899999886 3666677777655359999999999999988721 0 111 11111 244444432
Q ss_pred CCCccEEEEcccC-----------hHhHHHHHHHhhCCCceEEEEc
Q 018529 237 NGGVDRSVECTGN-----------IDNMISAFECVHDGWGVAVLVG 271 (354)
Q Consensus 237 ~~~~dvv~d~~g~-----------~~~~~~~~~~l~~~~g~~v~~g 271 (354)
.+.+|+|+-.... .+.++.+.+.|+++ |.++...
T Consensus 371 ~~~fDvIi~D~~~~~~~~~~~L~t~ef~~~~~~~L~pg-G~lv~~~ 415 (521)
T PRK03612 371 AEKFDVIIVDLPDPSNPALGKLYSVEFYRLLKRRLAPD-GLLVVQS 415 (521)
T ss_pred CCCCCEEEEeCCCCCCcchhccchHHHHHHHHHhcCCC-eEEEEec
Confidence 3489999753322 13577889999998 9988654
No 439
>PRK08278 short chain dehydrogenase; Provisional
Probab=95.21 E-value=0.12 Score=45.29 Aligned_cols=36 Identities=28% Similarity=0.413 Sum_probs=30.3
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChh
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK 205 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~ 205 (354)
++.++||+|+ |.+|...+..+...|+ +|++++++.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~ 41 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAE 41 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccc
Confidence 4678999987 9999998888888899 8888887654
No 440
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=95.19 E-value=0.11 Score=44.73 Aligned_cols=83 Identities=18% Similarity=0.257 Sum_probs=52.0
Q ss_pred CCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce--E--EcCCCCC-hhHHHHHHHH
Q 018529 166 KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD--F--VNTSEHD-RPIQEVIAEM 235 (354)
Q Consensus 166 ~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~--v--~~~~~~~-~~~~~~i~~~ 235 (354)
...++.++||+|+ |.+|...++.+...|+ +|++++++.++.+.+ ++.+... + .+....+ .++.+.+..+
T Consensus 8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 86 (247)
T PRK08945 8 DLLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTI 86 (247)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHH
Confidence 3557889999987 9999998888888899 889998887664433 2333221 1 2332111 1233322222
Q ss_pred cC--CCccEEEEcccC
Q 018529 236 TN--GGVDRSVECTGN 249 (354)
Q Consensus 236 ~~--~~~dvv~d~~g~ 249 (354)
.. +.+|.++.++|.
T Consensus 87 ~~~~~~id~vi~~Ag~ 102 (247)
T PRK08945 87 EEQFGRLDGVLHNAGL 102 (247)
T ss_pred HHHhCCCCEEEECCcc
Confidence 21 368999998764
No 441
>PRK14903 16S rRNA methyltransferase B; Provisional
Probab=95.18 E-value=0.33 Score=45.65 Aligned_cols=103 Identities=18% Similarity=0.260 Sum_probs=64.9
Q ss_pred hcCCCCCCeEEEEcCChhHHHHHHHHHHcC-CcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHcCC
Q 018529 164 VAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNG 238 (354)
Q Consensus 164 ~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g-~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~~ 238 (354)
..++++|++||=.|+|+ |..+++++..++ ...|++++.++++.+.+++ +|...+... ..+ .. .+.....+
T Consensus 232 ~l~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~~~-~~D--a~-~l~~~~~~ 306 (431)
T PRK14903 232 LMELEPGLRVLDTCAAP-GGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIEIK-IAD--AE-RLTEYVQD 306 (431)
T ss_pred HhCCCCCCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEE-ECc--hh-hhhhhhhc
Confidence 45788999988887764 555666677662 2399999999999888754 676542111 111 11 11112234
Q ss_pred CccEEEE---cccC-------------------------hHhHHHHHHHhhCCCceEEEEcC
Q 018529 239 GVDRSVE---CTGN-------------------------IDNMISAFECVHDGWGVAVLVGV 272 (354)
Q Consensus 239 ~~dvv~d---~~g~-------------------------~~~~~~~~~~l~~~~g~~v~~g~ 272 (354)
.||.|+- |.|. .+.+..+++.|+++ |+++..-.
T Consensus 307 ~fD~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG-G~LvYsTC 367 (431)
T PRK14903 307 TFDRILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKG-GILLYSTC 367 (431)
T ss_pred cCCEEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEEC
Confidence 6999984 3332 12367888899997 99876543
No 442
>PRK08303 short chain dehydrogenase; Provisional
Probab=95.17 E-value=0.17 Score=45.29 Aligned_cols=34 Identities=32% Similarity=0.330 Sum_probs=29.7
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS 203 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~ 203 (354)
.++++||+|+ +++|.+.++.+...|+ +|+.++++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~ 41 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRS 41 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecc
Confidence 4789999987 8999999998888999 88888776
No 443
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=95.16 E-value=0.12 Score=51.69 Aligned_cols=114 Identities=22% Similarity=0.305 Sum_probs=67.5
Q ss_pred cceeeEEeeccceEECCCCCCccchhhcccchhhhhhhhhhhcCCCCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEc
Q 018529 123 TFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD 201 (354)
Q Consensus 123 ~~a~~~~v~~~~~~~~P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~ 201 (354)
+..+|..+++...+.+ +..+.+++=.-. + -....-.++++||+|+ |.+|...++.+...|+ +|++++
T Consensus 378 ~~~~~~~~~~~~~f~~-eyw~~e~~kl~~---------~-~~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~ 445 (676)
T TIGR02632 378 AVSEYVSLPEQEAFDI-EYWPLEEAKLRR---------M-PKEKTLARRVAFVTGGAGGIGRETARRLAAEGA-HVVLAD 445 (676)
T ss_pred cccceecCchhhccch-hhhhhhHHhhcc---------C-CCCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEe
Confidence 3456666777777766 555555542110 0 0011124789999987 9999999988888899 899998
Q ss_pred CChhhHHHHH-h----cCCce--E--EcCCCCChhHHHHHHHHc--CCCccEEEEcccC
Q 018529 202 RSSKRFEEAK-K----FGVTD--F--VNTSEHDRPIQEVIAEMT--NGGVDRSVECTGN 249 (354)
Q Consensus 202 ~~~~~~~~~~-~----lg~~~--v--~~~~~~~~~~~~~i~~~~--~~~~dvv~d~~g~ 249 (354)
++.++.+.+. + .+... . .|..+. ..+.+.+.+.. -+++|++++++|.
T Consensus 446 r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~-~~v~~a~~~i~~~~g~iDilV~nAG~ 503 (676)
T TIGR02632 446 LNLEAAEAVAAEINGQFGAGRAVALKMDVTDE-QAVKAAFADVALAYGGVDIVVNNAGI 503 (676)
T ss_pred CCHHHHHHHHHHHHhhcCCCcEEEEECCCCCH-HHHHHHHHHHHHhcCCCcEEEECCCC
Confidence 8887655432 2 23211 1 233222 12333333322 2479999999874
No 444
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=95.16 E-value=0.14 Score=47.55 Aligned_cols=74 Identities=22% Similarity=0.305 Sum_probs=47.7
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcCCc-eE--EcCCCCChhHHHHHHHHcCCCccEE
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVT-DF--VNTSEHDRPIQEVIAEMTNGGVDRS 243 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~-~lg~~-~v--~~~~~~~~~~~~~i~~~~~~~~dvv 243 (354)
.+++++|+|+ |++|.+.+..+...|+ +|+++++++++.+... +.+.. .. .|..+. +.+.+.. +++|++
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~-----~~v~~~l-~~IDiL 249 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQVGQE-----AALAELL-EKVDIL 249 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCH-----HHHHHHh-CCCCEE
Confidence 4689999987 9999999888888899 8888888776654321 11111 12 222221 2233322 369999
Q ss_pred EEcccC
Q 018529 244 VECTGN 249 (354)
Q Consensus 244 ~d~~g~ 249 (354)
++++|.
T Consensus 250 InnAGi 255 (406)
T PRK07424 250 IINHGI 255 (406)
T ss_pred EECCCc
Confidence 998764
No 445
>PRK06484 short chain dehydrogenase; Validated
Probab=95.15 E-value=0.12 Score=49.96 Aligned_cols=79 Identities=27% Similarity=0.394 Sum_probs=53.6
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCce---EEcCCCCChhHHHHHHHHc--CCCcc
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD---FVNTSEHDRPIQEVIAEMT--NGGVD 241 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~~---v~~~~~~~~~~~~~i~~~~--~~~~d 241 (354)
+++++||+|+ +++|.+.++.+...|+ +|+.++++.++.+.+ ++++... ..|..+.+ ++.+.+.+.. .+++|
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g~iD 81 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSDEA-QIREGFEQLHREFGRID 81 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHH-HHHHHHHHHHHHhCCCC
Confidence 5788999987 9999999999889999 899998888876544 4455432 23333321 2333333322 14799
Q ss_pred EEEEcccC
Q 018529 242 RSVECTGN 249 (354)
Q Consensus 242 vv~d~~g~ 249 (354)
++++++|.
T Consensus 82 ~li~nag~ 89 (520)
T PRK06484 82 VLVNNAGV 89 (520)
T ss_pred EEEECCCc
Confidence 99998874
No 446
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.15 E-value=0.14 Score=44.14 Aligned_cols=80 Identities=28% Similarity=0.284 Sum_probs=47.7
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEE-EcCChhhHHH----HHhcCCce-EEcCCCCC-hhHHHHHHHHc--CC
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIG-VDRSSKRFEE----AKKFGVTD-FVNTSEHD-RPIQEVIAEMT--NG 238 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~-v~~~~~~~~~----~~~lg~~~-v~~~~~~~-~~~~~~i~~~~--~~ 238 (354)
++.++||+|+ |.+|...+..+...|+ +|+. ..++.++.+. +++.+... .+..+-.+ ..+.+.+.+.. .+
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG 81 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4678999987 9999999999988998 6554 4666655433 23334322 22122112 12333333322 13
Q ss_pred CccEEEEcccC
Q 018529 239 GVDRSVECTGN 249 (354)
Q Consensus 239 ~~dvv~d~~g~ 249 (354)
++|+++.++|.
T Consensus 82 ~id~vi~~ag~ 92 (250)
T PRK08063 82 RLDVFVNNAAS 92 (250)
T ss_pred CCCEEEECCCC
Confidence 68999998873
No 447
>PRK06523 short chain dehydrogenase; Provisional
Probab=95.14 E-value=0.1 Score=45.23 Aligned_cols=75 Identities=27% Similarity=0.287 Sum_probs=46.3
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCce-EEcCCCCC--hhHHHHHHHHcCCCccEEE
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHD--RPIQEVIAEMTNGGVDRSV 244 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~-v~~~~~~~--~~~~~~i~~~~~~~~dvv~ 244 (354)
+++++||+|+ |.+|...++.+...|+ +|++++++.+... .-.... ..|..+.+ ..+.+.+.+. .+++|+++
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~vi 82 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDDL---PEGVEFVAADLTTAEGCAAVARAVLER-LGGVDILV 82 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhhc---CCceeEEecCCCCHHHHHHHHHHHHHH-cCCCCEEE
Confidence 4789999987 9999999888888899 8998888765321 111111 12332221 1122222222 13689999
Q ss_pred Eccc
Q 018529 245 ECTG 248 (354)
Q Consensus 245 d~~g 248 (354)
+++|
T Consensus 83 ~~ag 86 (260)
T PRK06523 83 HVLG 86 (260)
T ss_pred ECCc
Confidence 9887
No 448
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=95.14 E-value=0.15 Score=47.07 Aligned_cols=35 Identities=29% Similarity=0.284 Sum_probs=31.8
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529 169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 203 (354)
Q Consensus 169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~ 203 (354)
.+.+|+|+|+|++|..++..+...|.++++.++.+
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 56689999999999999999999999999999887
No 449
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=95.13 E-value=0.11 Score=46.60 Aligned_cols=98 Identities=15% Similarity=0.142 Sum_probs=57.1
Q ss_pred eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhc-CCceEEcCCCCChhHHH-HHHHHcCCCccEEEEcccC
Q 018529 172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GVTDFVNTSEHDRPIQE-VIAEMTNGGVDRSVECTGN 249 (354)
Q Consensus 172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~l-g~~~v~~~~~~~~~~~~-~i~~~~~~~~dvv~d~~g~ 249 (354)
+|+|+|+|++|......+...|. .|+.+++.+++.+.+++- |. .+....+. ..+.- .......+.+|+||-|+=+
T Consensus 4 ~I~IiGaGaiG~~~a~~L~~~G~-~V~lv~r~~~~~~~i~~~~Gl-~i~~~g~~-~~~~~~~~~~~~~~~~D~viv~vK~ 80 (305)
T PRK05708 4 TWHILGAGSLGSLWACRLARAGL-PVRLILRDRQRLAAYQQAGGL-TLVEQGQA-SLYAIPAETADAAEPIHRLLLACKA 80 (305)
T ss_pred eEEEECCCHHHHHHHHHHHhCCC-CeEEEEechHHHHHHhhcCCe-EEeeCCcc-eeeccCCCCcccccccCEEEEECCH
Confidence 58999999999887766667787 888898988777777653 43 12111110 00000 0000011368999988744
Q ss_pred hH---hHHHHHHHhhCCCceEEEEcCC
Q 018529 250 ID---NMISAFECVHDGWGVAVLVGVP 273 (354)
Q Consensus 250 ~~---~~~~~~~~l~~~~g~~v~~g~~ 273 (354)
.+ .+..+...+.++ ..++.+.+.
T Consensus 81 ~~~~~al~~l~~~l~~~-t~vv~lQNG 106 (305)
T PRK05708 81 YDAEPAVASLAHRLAPG-AELLLLQNG 106 (305)
T ss_pred HhHHHHHHHHHhhCCCC-CEEEEEeCC
Confidence 32 233344455666 677766654
No 450
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=95.13 E-value=0.22 Score=45.11 Aligned_cols=93 Identities=18% Similarity=0.042 Sum_probs=62.1
Q ss_pred eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEE-cC---C---CCChhHHHHHHHHcCCCccEEE
Q 018529 172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV-NT---S---EHDRPIQEVIAEMTNGGVDRSV 244 (354)
Q Consensus 172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~-~~---~---~~~~~~~~~i~~~~~~~~dvv~ 244 (354)
+|.|+|+|.+|.+.+..+...|. .|.+.++++++.+.+++.+..... .. . ....+..+.+ +..|+|+
T Consensus 6 ~I~iIG~G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~-----~~aD~Vi 79 (328)
T PRK14618 6 RVAVLGAGAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEAL-----AGADFAV 79 (328)
T ss_pred eEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHH-----cCCCEEE
Confidence 68999999999998888888888 899999998887777654211000 00 0 0000122222 2589999
Q ss_pred EcccChHhHHHHHHHhhCCCceEEEEcC
Q 018529 245 ECTGNIDNMISAFECVHDGWGVAVLVGV 272 (354)
Q Consensus 245 d~~g~~~~~~~~~~~l~~~~g~~v~~g~ 272 (354)
.++... .++..++.++++ -.++.+..
T Consensus 80 ~~v~~~-~~~~v~~~l~~~-~~vi~~~~ 105 (328)
T PRK14618 80 VAVPSK-ALRETLAGLPRA-LGYVSCAK 105 (328)
T ss_pred EECchH-HHHHHHHhcCcC-CEEEEEee
Confidence 999884 567777888875 66666654
No 451
>PRK12747 short chain dehydrogenase; Provisional
Probab=95.12 E-value=0.44 Score=41.08 Aligned_cols=104 Identities=15% Similarity=0.121 Sum_probs=59.7
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEc-CChhhHH-HHH---hcCCce-E--EcCCCCC--hhHHHHHHHH--
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD-RSSKRFE-EAK---KFGVTD-F--VNTSEHD--RPIQEVIAEM-- 235 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~-~~~~~~~-~~~---~lg~~~-v--~~~~~~~--~~~~~~i~~~-- 235 (354)
.+.++||+|+ |.+|.+.++.+...|+ +|+.+. +++++.+ ... +.+... . .|..+.+ ..+.+.+.+.
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ 81 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence 4678999987 9999999999888999 676653 4444433 222 223221 1 1222211 1122223221
Q ss_pred --cC-CCccEEEEcccCh----------H---------------hHHHHHHHhhCCCceEEEEcCCC
Q 018529 236 --TN-GGVDRSVECTGNI----------D---------------NMISAFECVHDGWGVAVLVGVPS 274 (354)
Q Consensus 236 --~~-~~~dvv~d~~g~~----------~---------------~~~~~~~~l~~~~g~~v~~g~~~ 274 (354)
.. +++|++++++|.. + ..+.++..+... |++++++...
T Consensus 82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-g~iv~isS~~ 147 (252)
T PRK12747 82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN-SRIINISSAA 147 (252)
T ss_pred hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcC-CeEEEECCcc
Confidence 11 2699999988731 0 112344555666 8999888654
No 452
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=95.11 E-value=0.55 Score=39.36 Aligned_cols=96 Identities=19% Similarity=0.171 Sum_probs=63.0
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh-hhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529 169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 247 (354)
Q Consensus 169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~ 247 (354)
.|.+|||+|+|.+|.-=+.+....|+ +|+++.... +....+.+-+--..+. ...+ ...+ .++++||-++
T Consensus 11 ~~k~VlvvGgG~va~rKa~~ll~~ga-~v~Vvs~~~~~el~~~~~~~~i~~~~-~~~~------~~~~--~~~~lviaAt 80 (210)
T COG1648 11 EGKKVLVVGGGSVALRKARLLLKAGA-DVTVVSPEFEPELKALIEEGKIKWIE-REFD------AEDL--DDAFLVIAAT 80 (210)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCC-EEEEEcCCccHHHHHHHHhcCcchhh-cccC------hhhh--cCceEEEEeC
Confidence 56799999999999999999999999 777775544 3333232222211111 1111 0111 1489999999
Q ss_pred cChHhHHHHHHHhhCCCceEEEEcCCCC
Q 018529 248 GNIDNMISAFECVHDGWGVAVLVGVPSK 275 (354)
Q Consensus 248 g~~~~~~~~~~~l~~~~g~~v~~g~~~~ 275 (354)
+.++.-+...+..... +.+|...+...
T Consensus 81 ~d~~ln~~i~~~a~~~-~i~vNv~D~p~ 107 (210)
T COG1648 81 DDEELNERIAKAARER-RILVNVVDDPE 107 (210)
T ss_pred CCHHHHHHHHHHHHHh-CCceeccCCcc
Confidence 9977777777778786 88887766553
No 453
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=95.08 E-value=0.23 Score=44.06 Aligned_cols=70 Identities=16% Similarity=0.144 Sum_probs=49.6
Q ss_pred eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccChH
Q 018529 172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID 251 (354)
Q Consensus 172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~ 251 (354)
+|.|+|.|.+|...+..+...|. .|++.++++++.+.+.+.|.... . + ..+.++ ..|+||.|+....
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~---~--~--~~~~~~-----~aDivi~~vp~~~ 67 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGAVTA---E--T--ARQVTE-----QADVIFTMVPDSP 67 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCccc---C--C--HHHHHh-----cCCEEEEecCCHH
Confidence 37788999999988887778898 89999999999988887775321 1 1 222221 3688888877644
Q ss_pred hHH
Q 018529 252 NMI 254 (354)
Q Consensus 252 ~~~ 254 (354)
...
T Consensus 68 ~~~ 70 (291)
T TIGR01505 68 QVE 70 (291)
T ss_pred HHH
Confidence 433
No 454
>PLN02233 ubiquinone biosynthesis methyltransferase
Probab=95.07 E-value=0.32 Score=42.44 Aligned_cols=103 Identities=16% Similarity=0.227 Sum_probs=67.1
Q ss_pred hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHHhc-C------CceE--EcCCCCChhHHHHH
Q 018529 163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKF-G------VTDF--VNTSEHDRPIQEVI 232 (354)
Q Consensus 163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~~l-g------~~~v--~~~~~~~~~~~~~i 232 (354)
+...++++++||-+|+|. |..+..+++..+. .+|+++|.+++-.+.+++. . ...+ +..+..+ +
T Consensus 67 ~~~~~~~~~~VLDlGcGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~~~------l 139 (261)
T PLN02233 67 SWSGAKMGDRVLDLCCGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDATD------L 139 (261)
T ss_pred HHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEccccc------C
Confidence 345678899999999864 5677778877653 2899999999988877542 1 1111 1111100 0
Q ss_pred HHHcCCCccEEEEccc------ChHhHHHHHHHhhCCCceEEEEcCCC
Q 018529 233 AEMTNGGVDRSVECTG------NIDNMISAFECVHDGWGVAVLVGVPS 274 (354)
Q Consensus 233 ~~~~~~~~dvv~d~~g------~~~~~~~~~~~l~~~~g~~v~~g~~~ 274 (354)
.+.++.||+|+...+ ....+..+.+.|+++ |++++.....
T Consensus 140 -p~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpG-G~l~i~d~~~ 185 (261)
T PLN02233 140 -PFDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPG-SRVSILDFNK 185 (261)
T ss_pred -CCCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcC-cEEEEEECCC
Confidence 011236999976432 124688899999997 9998886554
No 455
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=95.06 E-value=0.18 Score=44.29 Aligned_cols=75 Identities=17% Similarity=0.168 Sum_probs=45.3
Q ss_pred EEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-c----C---CceE--EcCCCCChhHHHHHHHHcCC-Cc
Q 018529 173 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F----G---VTDF--VNTSEHDRPIQEVIAEMTNG-GV 240 (354)
Q Consensus 173 vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-l----g---~~~v--~~~~~~~~~~~~~i~~~~~~-~~ 240 (354)
|||+|+ |.+|...+.-+...+..+++.+++++.++-.+++ + . .... ....+-. -.+.+.+.... ++
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvr--d~~~l~~~~~~~~p 78 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVR--DKERLNRIFEEYKP 78 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCC--HHHHHHHHTT--T-
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeeccc--CHHHHHHHHhhcCC
Confidence 799987 9999998888888888799999999988776643 4 1 1111 1112221 33456666555 89
Q ss_pred cEEEEcccC
Q 018529 241 DRSVECTGN 249 (354)
Q Consensus 241 dvv~d~~g~ 249 (354)
|+||.++.-
T Consensus 79 diVfHaAA~ 87 (293)
T PF02719_consen 79 DIVFHAAAL 87 (293)
T ss_dssp SEEEE----
T ss_pred CEEEEChhc
Confidence 999998764
No 456
>PRK07791 short chain dehydrogenase; Provisional
Probab=95.06 E-value=0.25 Score=43.76 Aligned_cols=80 Identities=24% Similarity=0.267 Sum_probs=48.2
Q ss_pred CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCCh---------hhHH-HHH---hcCCce-E--EcCCCCChhHHH
Q 018529 168 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS---------KRFE-EAK---KFGVTD-F--VNTSEHDRPIQE 230 (354)
Q Consensus 168 ~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~---------~~~~-~~~---~lg~~~-v--~~~~~~~~~~~~ 230 (354)
-+++++||+|+ +++|...++.+...|+ +|+.++++. ++.+ .++ +.+... . .|..+.+ +..+
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~-~v~~ 81 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWD-GAAN 81 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHH-HHHH
Confidence 45789999987 9999998888888899 777776553 3322 222 234322 1 2332221 2233
Q ss_pred HHHHHc--CCCccEEEEcccC
Q 018529 231 VIAEMT--NGGVDRSVECTGN 249 (354)
Q Consensus 231 ~i~~~~--~~~~dvv~d~~g~ 249 (354)
.+++.. .+.+|++++++|.
T Consensus 82 ~~~~~~~~~g~id~lv~nAG~ 102 (286)
T PRK07791 82 LVDAAVETFGGLDVLVNNAGI 102 (286)
T ss_pred HHHHHHHhcCCCCEEEECCCC
Confidence 333322 1479999998874
No 457
>PRK07102 short chain dehydrogenase; Provisional
Probab=95.05 E-value=0.24 Score=42.43 Aligned_cols=76 Identities=17% Similarity=0.217 Sum_probs=47.8
Q ss_pred CeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCce--EE--cCCCCChhHHHHHHHHcCCCcc
Q 018529 171 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD--FV--NTSEHDRPIQEVIAEMTNGGVD 241 (354)
Q Consensus 171 ~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~--v~--~~~~~~~~~~~~i~~~~~~~~d 241 (354)
.+++|+|+ |.+|...++.+...|+ +|+++++++++.+.+.+ .+... ++ |..+. .++.+.+.+.. ..+|
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~-~~~d 78 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLERLADDLRARGAVAVSTHELDILDT-ASHAAFLDSLP-ALPD 78 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCCh-HHHHHHHHHHh-hcCC
Confidence 47899987 9999999998888898 89999998876654321 11112 12 22221 12333333332 2579
Q ss_pred EEEEcccC
Q 018529 242 RSVECTGN 249 (354)
Q Consensus 242 vv~d~~g~ 249 (354)
+++.++|.
T Consensus 79 ~vv~~ag~ 86 (243)
T PRK07102 79 IVLIAVGT 86 (243)
T ss_pred EEEECCcC
Confidence 99987764
No 458
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=95.00 E-value=0.32 Score=44.02 Aligned_cols=87 Identities=21% Similarity=0.211 Sum_probs=58.7
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529 169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 248 (354)
Q Consensus 169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g 248 (354)
.|.+|.|+|.|.+|...++.++.+|. +|++.+++.+..... . .+.. + +.+.+. ..|+|+.+++
T Consensus 145 ~g~~VgIIG~G~IG~~vA~~L~~~G~-~V~~~d~~~~~~~~~----~----~~~~-~--l~ell~-----~aDiVil~lP 207 (330)
T PRK12480 145 KNMTVAIIGTGRIGAATAKIYAGFGA-TITAYDAYPNKDLDF----L----TYKD-S--VKEAIK-----DADIISLHVP 207 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCChhHhhhh----h----hccC-C--HHHHHh-----cCCEEEEeCC
Confidence 56789999999999999999999999 999998876543211 0 0111 1 333222 4799998887
Q ss_pred ChH-----hHHHHHHHhhCCCceEEEEcCC
Q 018529 249 NID-----NMISAFECVHDGWGVAVLVGVP 273 (354)
Q Consensus 249 ~~~-----~~~~~~~~l~~~~g~~v~~g~~ 273 (354)
... .....+..++++ ..++.++..
T Consensus 208 ~t~~t~~li~~~~l~~mk~g-avlIN~aRG 236 (330)
T PRK12480 208 ANKESYHLFDKAMFDHVKKG-AILVNAARG 236 (330)
T ss_pred CcHHHHHHHhHHHHhcCCCC-cEEEEcCCc
Confidence 543 223455677886 777777654
No 459
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=94.99 E-value=0.25 Score=39.44 Aligned_cols=80 Identities=19% Similarity=0.199 Sum_probs=54.4
Q ss_pred eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCc-----------eEEcCCCCChhHHHHHHHHcCCCc
Q 018529 172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-----------DFVNTSEHDRPIQEVIAEMTNGGV 240 (354)
Q Consensus 172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~-----------~v~~~~~~~~~~~~~i~~~~~~~~ 240 (354)
+|.|+|+|..|.+.+..+...|. .|..-.++++..+.+++-+.. .+... .++.+.+ .+.
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g~-~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t----~dl~~a~-----~~a 70 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNGH-EVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKAT----TDLEEAL-----EDA 70 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCTE-EEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEE----SSHHHHH-----TT-
T ss_pred CEEEECcCHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccc----cCHHHHh-----Ccc
Confidence 57899999999999999999997 999999999888777653221 11111 1244444 257
Q ss_pred cEEEEcccChHhHHHHHHHhhC
Q 018529 241 DRSVECTGNIDNMISAFECVHD 262 (354)
Q Consensus 241 dvv~d~~g~~~~~~~~~~~l~~ 262 (354)
|+++-++.+ ..++..++.+++
T Consensus 71 d~IiiavPs-~~~~~~~~~l~~ 91 (157)
T PF01210_consen 71 DIIIIAVPS-QAHREVLEQLAP 91 (157)
T ss_dssp SEEEE-S-G-GGHHHHHHHHTT
T ss_pred cEEEecccH-HHHHHHHHHHhh
Confidence 999999987 556666666655
No 460
>PRK14902 16S rRNA methyltransferase B; Provisional
Probab=94.98 E-value=0.25 Score=46.75 Aligned_cols=103 Identities=17% Similarity=0.331 Sum_probs=63.1
Q ss_pred hhcCCCCCCeEEEEcCChhHHHHHHHHHHc-CCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHcC
Q 018529 163 NVAKPERGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN 237 (354)
Q Consensus 163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~-g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~ 237 (354)
....++++++||=.|+|+ |..++.+++.. +...|++++.++++.+.+++ +|...+. ....+ ..+....+ .
T Consensus 244 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~~v~avDi~~~~l~~~~~n~~~~g~~~v~-~~~~D--~~~~~~~~-~ 318 (444)
T PRK14902 244 PALDPKGGDTVLDACAAP-GGKTTHIAELLKNTGKVVALDIHEHKLKLIEENAKRLGLTNIE-TKALD--ARKVHEKF-A 318 (444)
T ss_pred HHhCCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEE-EEeCC--cccccchh-c
Confidence 345678899888887754 55555666665 22389999999998877643 5665421 11111 11111111 1
Q ss_pred CCccEEEE---cccC-------------------------hHhHHHHHHHhhCCCceEEEEc
Q 018529 238 GGVDRSVE---CTGN-------------------------IDNMISAFECVHDGWGVAVLVG 271 (354)
Q Consensus 238 ~~~dvv~d---~~g~-------------------------~~~~~~~~~~l~~~~g~~v~~g 271 (354)
+.||.|+- |.|. ...+..+++.|+++ |+++...
T Consensus 319 ~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpG-G~lvyst 379 (444)
T PRK14902 319 EKFDKILVDAPCSGLGVIRRKPDIKYNKTKEDIESLQEIQLEILESVAQYLKKG-GILVYST 379 (444)
T ss_pred ccCCEEEEcCCCCCCeeeccCcchhhcCCHHHHHHHHHHHHHHHHHHHHHcCCC-CEEEEEc
Confidence 46999974 3321 13577788899997 9988543
No 461
>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []. Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.
Probab=94.97 E-value=0.078 Score=45.36 Aligned_cols=104 Identities=22% Similarity=0.343 Sum_probs=62.8
Q ss_pred hhhcCCCCCCeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHHh----cCCceE--EcCCCCChhHHHHHHH
Q 018529 162 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDF--VNTSEHDRPIQEVIAE 234 (354)
Q Consensus 162 ~~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~~----lg~~~v--~~~~~~~~~~~~~i~~ 234 (354)
.+....++|++||=+|+|. |..+..+++..+. .+|+++|.+++-++.+++ .+...+ +..+..+ +.
T Consensus 40 ~~~~~~~~g~~vLDv~~Gt-G~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da~~--lp----- 111 (233)
T PF01209_consen 40 IKLLGLRPGDRVLDVACGT-GDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDAED--LP----- 111 (233)
T ss_dssp HHHHT--S--EEEEET-TT-SHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BTTB---------
T ss_pred HhccCCCCCCEEEEeCCCh-HHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCHHH--hc-----
Confidence 3445788999999998764 7788888888763 299999999988887754 233222 1111111 10
Q ss_pred HcCCCccEEEEcccC------hHhHHHHHHHhhCCCceEEEEcCCC
Q 018529 235 MTNGGVDRSVECTGN------IDNMISAFECVHDGWGVAVLVGVPS 274 (354)
Q Consensus 235 ~~~~~~dvv~d~~g~------~~~~~~~~~~l~~~~g~~v~~g~~~ 274 (354)
+.++.||+|..+.|- ...+.++.+.|+|+ |+++.+....
T Consensus 112 ~~d~sfD~v~~~fglrn~~d~~~~l~E~~RVLkPG-G~l~ile~~~ 156 (233)
T PF01209_consen 112 FPDNSFDAVTCSFGLRNFPDRERALREMYRVLKPG-GRLVILEFSK 156 (233)
T ss_dssp S-TT-EEEEEEES-GGG-SSHHHHHHHHHHHEEEE-EEEEEEEEEB
T ss_pred CCCCceeEEEHHhhHHhhCCHHHHHHHHHHHcCCC-eEEEEeeccC
Confidence 122369999987763 24678899999997 9999887654
No 462
>PLN02256 arogenate dehydrogenase
Probab=94.96 E-value=0.24 Score=44.25 Aligned_cols=92 Identities=17% Similarity=0.222 Sum_probs=57.6
Q ss_pred CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEE
Q 018529 166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE 245 (354)
Q Consensus 166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d 245 (354)
.-..+.+|.|+|.|.+|...+..++..|. .|+++++++. .+.++++|+.. +.+ ..+.+ ....|+||-
T Consensus 32 ~~~~~~kI~IIG~G~mG~slA~~L~~~G~-~V~~~d~~~~-~~~a~~~gv~~---~~~----~~e~~----~~~aDvVil 98 (304)
T PLN02256 32 EKSRKLKIGIVGFGNFGQFLAKTFVKQGH-TVLATSRSDY-SDIAAELGVSF---FRD----PDDFC----EEHPDVVLL 98 (304)
T ss_pred ccCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECccH-HHHHHHcCCee---eCC----HHHHh----hCCCCEEEE
Confidence 33455689999999999988888888887 8889988864 35666677632 111 22221 124789988
Q ss_pred cccChHhHHHHHHH-----hhCCCceEEEEcC
Q 018529 246 CTGNIDNMISAFEC-----VHDGWGVAVLVGV 272 (354)
Q Consensus 246 ~~g~~~~~~~~~~~-----l~~~~g~~v~~g~ 272 (354)
|+... .+...++- ++++ ..++.++.
T Consensus 99 avp~~-~~~~vl~~l~~~~l~~~-~iviDv~S 128 (304)
T PLN02256 99 CTSIL-STEAVLRSLPLQRLKRS-TLFVDVLS 128 (304)
T ss_pred ecCHH-HHHHHHHhhhhhccCCC-CEEEecCC
Confidence 88753 33333332 3454 55555554
No 463
>PRK12743 oxidoreductase; Provisional
Probab=94.94 E-value=0.18 Score=43.69 Aligned_cols=78 Identities=18% Similarity=0.147 Sum_probs=47.0
Q ss_pred CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEc-CChhhHHH----HHhcCCce-E--EcCCCCC--hhHHHHHHHHcCC
Q 018529 170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD-RSSKRFEE----AKKFGVTD-F--VNTSEHD--RPIQEVIAEMTNG 238 (354)
Q Consensus 170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~-~~~~~~~~----~~~lg~~~-v--~~~~~~~--~~~~~~i~~~~~~ 238 (354)
++++||+|+ |.+|...++.+...|+ +|+.+. ++.++.+. +++.+... . .|..+.. ..+.+.+.+.. +
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~ 79 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRL-G 79 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence 468999987 9999999999999999 676654 45444333 23345322 2 2333221 11222332222 3
Q ss_pred CccEEEEcccC
Q 018529 239 GVDRSVECTGN 249 (354)
Q Consensus 239 ~~dvv~d~~g~ 249 (354)
++|+++.+.|.
T Consensus 80 ~id~li~~ag~ 90 (256)
T PRK12743 80 RIDVLVNNAGA 90 (256)
T ss_pred CCCEEEECCCC
Confidence 68999998874
No 464
>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A ....
Probab=94.91 E-value=0.089 Score=39.39 Aligned_cols=95 Identities=23% Similarity=0.287 Sum_probs=57.3
Q ss_pred CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCc-eEEcCCCCChhHHHHHHHHcCCCccEEE
Q 018529 170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHDRPIQEVIAEMTNGGVDRSV 244 (354)
Q Consensus 170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~-~v~~~~~~~~~~~~~i~~~~~~~~dvv~ 244 (354)
|.+||-.|+|. |...+.+++.. ..++++++.+++..+.++. .+.+ ++- .... ++.+....+..+.+|+|+
T Consensus 1 g~~vlD~~~G~-G~~~~~~~~~~-~~~~~gvdi~~~~~~~a~~~~~~~~~~~~~~-~~~~--D~~~~~~~~~~~~~D~Iv 75 (117)
T PF13659_consen 1 GDRVLDPGCGS-GTFLLAALRRG-AARVTGVDIDPEAVELARRNLPRNGLDDRVE-VIVG--DARDLPEPLPDGKFDLIV 75 (117)
T ss_dssp TEEEEEETSTT-CHHHHHHHHHC-TCEEEEEESSHHHHHHHHHHCHHCTTTTTEE-EEES--HHHHHHHTCTTT-EEEEE
T ss_pred CCEEEEcCcch-HHHHHHHHHHC-CCeEEEEEECHHHHHHHHHHHHHccCCceEE-EEEC--chhhchhhccCceeEEEE
Confidence 46777776642 44555555554 3499999999999888765 3331 111 1111 244444344445899998
Q ss_pred EcccC--------------hHhHHHHHHHhhCCCceEEEE
Q 018529 245 ECTGN--------------IDNMISAFECVHDGWGVAVLV 270 (354)
Q Consensus 245 d~~g~--------------~~~~~~~~~~l~~~~g~~v~~ 270 (354)
-...- ...++.+.+.|+++ |.++++
T Consensus 76 ~npP~~~~~~~~~~~~~~~~~~~~~~~~~L~~g-G~~~~~ 114 (117)
T PF13659_consen 76 TNPPYGPRSGDKAALRRLYSRFLEAAARLLKPG-GVLVFI 114 (117)
T ss_dssp E--STTSBTT----GGCHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred ECCCCccccccchhhHHHHHHHHHHHHHHcCCC-eEEEEE
Confidence 64321 14578899999997 988765
No 465
>PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional
Probab=94.88 E-value=0.15 Score=50.84 Aligned_cols=78 Identities=22% Similarity=0.213 Sum_probs=52.9
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChh---------------------hHHHHHhcCCceEEcCCCCCh
Q 018529 168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK---------------------RFEEAKKFGVTDFVNTSEHDR 226 (354)
Q Consensus 168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~---------------------~~~~~~~lg~~~v~~~~~~~~ 226 (354)
+.+++|+|+|+|+.|+.++..+...|. +|++++..+. ..+.++++|++..++..-...
T Consensus 191 ~~~k~VaIIGaGpAGl~aA~~La~~G~-~Vtv~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~Gv~i~~~~~v~~d 269 (652)
T PRK12814 191 KSGKKVAIIGAGPAGLTAAYYLLRKGH-DVTIFDANEQAGGMMRYGIPRFRLPESVIDADIAPLRAMGAEFRFNTVFGRD 269 (652)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-cEEEEecCCCCCceeeecCCCCCCCHHHHHHHHHHHHHcCCEEEeCCcccCc
Confidence 457899999999999999999999998 8888876543 144556778765544321110
Q ss_pred hHHHHHHHHcCCCccEEEEcccCh
Q 018529 227 PIQEVIAEMTNGGVDRSVECTGNI 250 (354)
Q Consensus 227 ~~~~~i~~~~~~~~dvv~d~~g~~ 250 (354)
-..+.+. ..+|.||-++|..
T Consensus 270 v~~~~~~----~~~DaVilAtGa~ 289 (652)
T PRK12814 270 ITLEELQ----KEFDAVLLAVGAQ 289 (652)
T ss_pred cCHHHHH----hhcCEEEEEcCCC
Confidence 0111221 1489999998864
No 466
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=94.88 E-value=0.2 Score=44.61 Aligned_cols=95 Identities=17% Similarity=0.198 Sum_probs=57.3
Q ss_pred eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCCh--hHHHHHHHHcCCCccEEEEcccC
Q 018529 172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR--PIQEVIAEMTNGGVDRSVECTGN 249 (354)
Q Consensus 172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~--~~~~~i~~~~~~~~dvv~d~~g~ 249 (354)
+|+|+|+|.+|.+.+..+...|. .|+.+++++++.+.+++.|... ...+... ......... +.+|+||-++..
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~--~~~d~vila~k~ 76 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGH-DVTLVARRGAHLDALNENGLRL--EDGEITVPVLAADDPAEL--GPQDLVILAVKA 76 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECChHHHHHHHHcCCcc--cCCceeecccCCCChhHc--CCCCEEEEeccc
Confidence 58899999999988887777887 8999988888877777656421 0000000 000011111 368999999876
Q ss_pred hHhHHHHHHHh----hCCCceEEEEcCC
Q 018529 250 IDNMISAFECV----HDGWGVAVLVGVP 273 (354)
Q Consensus 250 ~~~~~~~~~~l----~~~~g~~v~~g~~ 273 (354)
. .+..+++.+ .++ ..++.+...
T Consensus 77 ~-~~~~~~~~l~~~l~~~-~~iv~~~nG 102 (304)
T PRK06522 77 Y-QLPAALPSLAPLLGPD-TPVLFLQNG 102 (304)
T ss_pred c-cHHHHHHHHhhhcCCC-CEEEEecCC
Confidence 3 334444433 343 456655443
No 467
>PLN02490 MPBQ/MSBQ methyltransferase
Probab=94.87 E-value=0.21 Score=45.12 Aligned_cols=98 Identities=21% Similarity=0.310 Sum_probs=63.1
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCC-ceEEcCCCCChhHHHHHHHHcCCCccEEEEc
Q 018529 168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV-TDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 246 (354)
Q Consensus 168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~-~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~ 246 (354)
+++.+||=+|+|. |..+..+++..+...|+++|.+++-.+.+++... ..+ .....+ ..+ + .+..+.||+|+.+
T Consensus 112 ~~~~~VLDLGcGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i-~~i~gD--~e~-l-p~~~~sFDvVIs~ 185 (340)
T PLN02490 112 DRNLKVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKEC-KIIEGD--AED-L-PFPTDYADRYVSA 185 (340)
T ss_pred CCCCEEEEEecCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCC-eEEecc--HHh-C-CCCCCceeEEEEc
Confidence 4678898899876 7777788887754589999999988777766321 111 111111 111 0 1122369998864
Q ss_pred cc------ChHhHHHHHHHhhCCCceEEEEcC
Q 018529 247 TG------NIDNMISAFECVHDGWGVAVLVGV 272 (354)
Q Consensus 247 ~g------~~~~~~~~~~~l~~~~g~~v~~g~ 272 (354)
.. ....++.+.+.|+++ |++++.+.
T Consensus 186 ~~L~~~~d~~~~L~e~~rvLkPG-G~LvIi~~ 216 (340)
T PLN02490 186 GSIEYWPDPQRGIKEAYRVLKIG-GKACLIGP 216 (340)
T ss_pred ChhhhCCCHHHHHHHHHHhcCCC-cEEEEEEe
Confidence 31 124678899999997 99987753
No 468
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=94.86 E-value=0.37 Score=40.76 Aligned_cols=100 Identities=19% Similarity=0.136 Sum_probs=60.6
Q ss_pred CCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCceEEc-------CCCCC-----hhHHHHH
Q 018529 166 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDFVN-------TSEHD-----RPIQEVI 232 (354)
Q Consensus 166 ~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~-~~lg~~~v~~-------~~~~~-----~~~~~~i 232 (354)
.+.++.+||+.|||. |.-++.+|. .|. .|++++.++...+.+ ++.+...... +...+ .++.+.
T Consensus 34 ~~~~~~rvL~~gCG~-G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l- 109 (218)
T PRK13255 34 ALPAGSRVLVPLCGK-SLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFAL- 109 (218)
T ss_pred CCCCCCeEEEeCCCC-hHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCC-
Confidence 456778999999874 777777775 698 999999999988865 3333221000 00000 001100
Q ss_pred HHHcCCCccEEEEccc--------ChHhHHHHHHHhhCCCceEEEE
Q 018529 233 AEMTNGGVDRSVECTG--------NIDNMISAFECVHDGWGVAVLV 270 (354)
Q Consensus 233 ~~~~~~~~dvv~d~~g--------~~~~~~~~~~~l~~~~g~~v~~ 270 (354)
.....+.||.|+|.+- ....+..+.+.|+++ |++.++
T Consensus 110 ~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pg-G~~~l~ 154 (218)
T PRK13255 110 TAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAG-CRGLLV 154 (218)
T ss_pred CcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCC-CeEEEE
Confidence 0001136899998653 124578888999997 875543
No 469
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.86 E-value=0.28 Score=43.36 Aligned_cols=95 Identities=22% Similarity=0.231 Sum_probs=66.4
Q ss_pred hcccchhhhhhhhhhhcCC-CCCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCCh
Q 018529 149 ILSCGVSTGLGATLNVAKP-ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 226 (354)
Q Consensus 149 ~l~~~~~~a~~~l~~~~~~-~~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~ 226 (354)
.+||+....+.. ++..++ -.|++|.|+|. +.+|.-.+.++...|+ .|++..+... +
T Consensus 138 ~~PcTp~aii~l-L~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ga-tVtv~~~~t~-------------------~- 195 (301)
T PRK14194 138 LTPCTPSGCLRL-LEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHC-SVTVVHSRST-------------------D- 195 (301)
T ss_pred CCCCcHHHHHHH-HHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEECCCCC-------------------C-
Confidence 456554444433 444444 46999999997 5999999999999999 8888854432 1
Q ss_pred hHHHHHHHHcCCCccEEEEcccChHhHHHHHHHhhCCCceEEEEcCCC
Q 018529 227 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 274 (354)
Q Consensus 227 ~~~~~i~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~ 274 (354)
..+..+ ..|+|+-++|.+..+...+ ++++ ..++.+|...
T Consensus 196 -l~e~~~-----~ADIVIsavg~~~~v~~~~--ik~G-aiVIDvgin~ 234 (301)
T PRK14194 196 -AKALCR-----QADIVVAAVGRPRLIDADW--LKPG-AVVIDVGINR 234 (301)
T ss_pred -HHHHHh-----cCCEEEEecCChhcccHhh--ccCC-cEEEEecccc
Confidence 222222 3799999999987777655 8886 8888887543
No 470
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=94.85 E-value=0.11 Score=45.24 Aligned_cols=76 Identities=21% Similarity=0.258 Sum_probs=47.9
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCce-EEcCCCCChhHHHHHHHHc--CCCccEEE
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMT--NGGVDRSV 244 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~i~~~~--~~~~dvv~ 244 (354)
.++++||+|+ |.+|.+.++.+...|+ +|+.++++.++.+. ..... ..|..+. ..+.+.+.+.. .+++|+++
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~---~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~id~li 82 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH---ENYQFVPTDVSSA-EEVNHTVAEIIEKFGRIDGLV 82 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc---CceEEEEccCCCH-HHHHHHHHHHHHHcCCCCEEE
Confidence 4678999987 9999999999888999 88888777654321 11111 1233322 12333333322 13789999
Q ss_pred EcccC
Q 018529 245 ECTGN 249 (354)
Q Consensus 245 d~~g~ 249 (354)
.++|.
T Consensus 83 ~~Ag~ 87 (266)
T PRK06171 83 NNAGI 87 (266)
T ss_pred ECCcc
Confidence 98873
No 471
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=94.81 E-value=0.19 Score=45.20 Aligned_cols=38 Identities=18% Similarity=0.123 Sum_probs=31.1
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhH
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRF 207 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~ 207 (354)
.|.+|||+|+ |.+|...+..+...|. +|+++.++.++.
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~ 42 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGY-TVKATVRDLTDR 42 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCCcch
Confidence 4679999987 9999999988888898 788777766543
No 472
>PLN02336 phosphoethanolamine N-methyltransferase
Probab=94.81 E-value=0.19 Score=48.07 Aligned_cols=103 Identities=17% Similarity=0.135 Sum_probs=66.2
Q ss_pred hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhc--CCceEEcCCCCChhHHHHHHHHcCCCc
Q 018529 163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF--GVTDFVNTSEHDRPIQEVIAEMTNGGV 240 (354)
Q Consensus 163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~l--g~~~v~~~~~~~~~~~~~i~~~~~~~~ 240 (354)
+...++++++||=+|+|. |..++.+++..|. +|++++.+++..+.+++. +...-+.+...+ +.+ ..+..+.|
T Consensus 260 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvDiS~~~l~~A~~~~~~~~~~v~~~~~d--~~~--~~~~~~~f 333 (475)
T PLN02336 260 DKLDLKPGQKVLDVGCGI-GGGDFYMAENFDV-HVVGIDLSVNMISFALERAIGRKCSVEFEVAD--CTK--KTYPDNSF 333 (475)
T ss_pred HhcCCCCCCEEEEEeccC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHhhcCCCceEEEEcC--ccc--CCCCCCCE
Confidence 344567889999999875 6677788888888 999999999888877542 221101111111 100 00112369
Q ss_pred cEEEEccc------ChHhHHHHHHHhhCCCceEEEEcC
Q 018529 241 DRSVECTG------NIDNMISAFECVHDGWGVAVLVGV 272 (354)
Q Consensus 241 dvv~d~~g------~~~~~~~~~~~l~~~~g~~v~~g~ 272 (354)
|+|+.... ....+..+.+.|+++ |++++...
T Consensus 334 D~I~s~~~l~h~~d~~~~l~~~~r~Lkpg-G~l~i~~~ 370 (475)
T PLN02336 334 DVIYSRDTILHIQDKPALFRSFFKWLKPG-GKVLISDY 370 (475)
T ss_pred EEEEECCcccccCCHHHHHHHHHHHcCCC-eEEEEEEe
Confidence 99987421 135678899999997 99887643
No 473
>PRK12779 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional
Probab=94.80 E-value=0.1 Score=53.97 Aligned_cols=78 Identities=19% Similarity=0.175 Sum_probs=53.4
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh---------------------hhHHHHHhcCCceEEcCCCCCh
Q 018529 168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS---------------------KRFEEAKKFGVTDFVNTSEHDR 226 (354)
Q Consensus 168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~---------------------~~~~~~~~lg~~~v~~~~~~~~ 226 (354)
..|++|+|+|+|+.|++|+..+...|. .|++.++.+ ...+.++++|+....+..-...
T Consensus 304 ~~gkkVaVIGsGPAGLsaA~~Lar~G~-~VtVfE~~~~~GG~l~yGIP~~rlp~~vi~~~i~~l~~~Gv~f~~n~~vG~d 382 (944)
T PRK12779 304 AVKPPIAVVGSGPSGLINAYLLAVEGF-PVTVFEAFHDLGGVLRYGIPEFRLPNQLIDDVVEKIKLLGGRFVKNFVVGKT 382 (944)
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCC-eEEEEeeCCCCCceEEccCCCCcChHHHHHHHHHHHHhhcCeEEEeEEeccE
Confidence 458999999999999999999999999 888887643 2345567788765444322111
Q ss_pred hHHHHHHHHcCCCccEEEEcccC
Q 018529 227 PIQEVIAEMTNGGVDRSVECTGN 249 (354)
Q Consensus 227 ~~~~~i~~~~~~~~dvv~d~~g~ 249 (354)
+ .+.++...++|.||-++|.
T Consensus 383 -i--t~~~l~~~~yDAV~LAtGA 402 (944)
T PRK12779 383 -A--TLEDLKAAGFWKIFVGTGA 402 (944)
T ss_pred -E--eHHHhccccCCEEEEeCCC
Confidence 1 1222222368999999886
No 474
>PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional
Probab=94.80 E-value=0.54 Score=39.50 Aligned_cols=97 Identities=20% Similarity=0.220 Sum_probs=58.2
Q ss_pred CCCCCeEEEEcCChhHHHHHHHHHHcCC-cEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHc-CCCccEEE
Q 018529 167 PERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT-NGGVDRSV 244 (354)
Q Consensus 167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~-~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~-~~~~dvv~ 244 (354)
++++++||=+|+|+ |..+..+++..+. ..|++++.++.. ..-++ .++..+-.+....+.+.+.. .+.+|+|+
T Consensus 49 ~~~~~~VLDlG~Gt-G~~t~~l~~~~~~~~~V~aVDi~~~~----~~~~v-~~i~~D~~~~~~~~~i~~~~~~~~~D~V~ 122 (209)
T PRK11188 49 FKPGMTVVDLGAAP-GGWSQYAVTQIGDKGRVIACDILPMD----PIVGV-DFLQGDFRDELVLKALLERVGDSKVQVVM 122 (209)
T ss_pred CCCCCEEEEEcccC-CHHHHHHHHHcCCCceEEEEeccccc----CCCCc-EEEecCCCChHHHHHHHHHhCCCCCCEEe
Confidence 58888888888865 5566666676653 389999987621 11122 22322222222333443433 34899999
Q ss_pred Ecc-----cC------------hHhHHHHHHHhhCCCceEEEE
Q 018529 245 ECT-----GN------------IDNMISAFECVHDGWGVAVLV 270 (354)
Q Consensus 245 d~~-----g~------------~~~~~~~~~~l~~~~g~~v~~ 270 (354)
... |. ...++.+.+.|+++ |++++.
T Consensus 123 S~~~~~~~g~~~~d~~~~~~~~~~~L~~~~~~LkpG-G~~vi~ 164 (209)
T PRK11188 123 SDMAPNMSGTPAVDIPRAMYLVELALDMCRDVLAPG-GSFVVK 164 (209)
T ss_pred cCCCCccCCChHHHHHHHHHHHHHHHHHHHHHcCCC-CEEEEE
Confidence 643 22 13567788899997 998874
No 475
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=94.78 E-value=0.13 Score=45.47 Aligned_cols=44 Identities=25% Similarity=0.268 Sum_probs=37.7
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH
Q 018529 168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK 211 (354)
Q Consensus 168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~ 211 (354)
..+++++|+|+|+.+.+++..+...|+.+++++.|+.+|.+.+.
T Consensus 125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La 168 (283)
T PRK14027 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALA 168 (283)
T ss_pred cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHH
Confidence 34788999999999999888888899889999999988877654
No 476
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=94.77 E-value=0.44 Score=44.63 Aligned_cols=73 Identities=23% Similarity=0.367 Sum_probs=50.6
Q ss_pred CeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHH---------cC-CCc
Q 018529 171 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEM---------TN-GGV 240 (354)
Q Consensus 171 ~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~---------~~-~~~ 240 (354)
.+|.|+|.|.+|...+..+...|. .|+++++++++.+.++. |...+ .+.. +.+.+++. +. ...
T Consensus 4 ~kI~VIGlG~~G~~~A~~La~~G~-~V~~~D~~~~~v~~l~~-g~~~~---~e~~--l~~~l~~~~~~g~l~~~~~~~~a 76 (415)
T PRK11064 4 ETISVIGLGYIGLPTAAAFASRQK-QVIGVDINQHAVDTINR-GEIHI---VEPD--LDMVVKTAVEGGYLRATTTPEPA 76 (415)
T ss_pred cEEEEECcchhhHHHHHHHHhCCC-EEEEEeCCHHHHHHHHC-CCCCc---CCCC--HHHHHHHHhhcCceeeecccccC
Confidence 468999999999988888888898 99999999999987653 33211 1221 33333221 11 158
Q ss_pred cEEEEcccCh
Q 018529 241 DRSVECTGNI 250 (354)
Q Consensus 241 dvv~d~~g~~ 250 (354)
|+||-|++.+
T Consensus 77 Dvvii~vptp 86 (415)
T PRK11064 77 DAFLIAVPTP 86 (415)
T ss_pred CEEEEEcCCC
Confidence 9999999875
No 477
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=94.76 E-value=0.37 Score=42.87 Aligned_cols=70 Identities=21% Similarity=0.257 Sum_probs=48.9
Q ss_pred eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccChH
Q 018529 172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID 251 (354)
Q Consensus 172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~~ 251 (354)
+|.|+|.|.+|...+..+...|. .|++.++++++.+.+.+.|.... .+ ..+.+. ..|+||.++....
T Consensus 4 ~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~g~~~~---~~----~~e~~~-----~~d~vi~~vp~~~ 70 (296)
T PRK11559 4 KVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIAAGAETA---ST----AKAVAE-----QCDVIITMLPNSP 70 (296)
T ss_pred eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec---CC----HHHHHh-----cCCEEEEeCCCHH
Confidence 68899999999987777777887 88999999998888777765311 11 222221 3688888877544
Q ss_pred hHH
Q 018529 252 NMI 254 (354)
Q Consensus 252 ~~~ 254 (354)
..+
T Consensus 71 ~~~ 73 (296)
T PRK11559 71 HVK 73 (296)
T ss_pred HHH
Confidence 433
No 478
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=94.76 E-value=0.22 Score=43.89 Aligned_cols=67 Identities=22% Similarity=0.323 Sum_probs=48.5
Q ss_pred eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccCh
Q 018529 172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI 250 (354)
Q Consensus 172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~ 250 (354)
+|.|+|.|.+|...+..++..|. .|+++++++++.+.+.+.|.... ...+ . +.+ ..+|+||.|+...
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~---~~~~--~-~~~-----~~aDlVilavp~~ 68 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDE---ASTD--L-SLL-----KDCDLVILALPIG 68 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCccc---ccCC--H-hHh-----cCCCEEEEcCCHH
Confidence 58899999999988888777887 89999999999888888774211 1111 1 111 2579999998763
No 479
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=94.74 E-value=0.26 Score=45.25 Aligned_cols=35 Identities=29% Similarity=0.427 Sum_probs=31.2
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529 169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 203 (354)
Q Consensus 169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~ 203 (354)
...+|+|+|+|++|..+++.+...|.++++.+|.+
T Consensus 40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 35689999999999999999999999899999865
No 480
>PRK13984 putative oxidoreductase; Provisional
Probab=94.73 E-value=0.16 Score=50.15 Aligned_cols=78 Identities=24% Similarity=0.208 Sum_probs=53.8
Q ss_pred CCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCCh---------------------hhHHHHHhcCCceEEcCCCCC
Q 018529 167 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS---------------------KRFEEAKKFGVTDFVNTSEHD 225 (354)
Q Consensus 167 ~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~---------------------~~~~~~~~lg~~~v~~~~~~~ 225 (354)
.+++++|+|+|+|+.|+.++..++..|. +|+++++.+ ...++++++|++..++..-..
T Consensus 280 ~~~~~~v~IIGaG~aGl~aA~~L~~~G~-~v~vie~~~~~gG~~~~~i~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~ 358 (604)
T PRK13984 280 EKKNKKVAIVGSGPAGLSAAYFLATMGY-EVTVYESLSKPGGVMRYGIPSYRLPDEALDKDIAFIEALGVKIHLNTRVGK 358 (604)
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceEeecCCcccCCHHHHHHHHHHHHHCCcEEECCCEeCC
Confidence 5678999999999999999999999998 788886543 124566778876554432111
Q ss_pred hhHHHHHHHHcCCCccEEEEcccC
Q 018529 226 RPIQEVIAEMTNGGVDRSVECTGN 249 (354)
Q Consensus 226 ~~~~~~i~~~~~~~~dvv~d~~g~ 249 (354)
....+.++ ..+|.||.++|.
T Consensus 359 ~~~~~~~~----~~yD~vilAtGa 378 (604)
T PRK13984 359 DIPLEELR----EKHDAVFLSTGF 378 (604)
T ss_pred cCCHHHHH----hcCCEEEEEcCc
Confidence 00112221 269999999985
No 481
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=94.72 E-value=0.41 Score=42.71 Aligned_cols=88 Identities=25% Similarity=0.324 Sum_probs=59.8
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529 168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 247 (354)
Q Consensus 168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~ 247 (354)
-.|++|.|+|-|.+|...++.++.+|. +|++..+.....+.+...|+. +. + +.+.++ ..|+|+-++
T Consensus 14 LkgKtVGIIG~GsIG~amA~nL~d~G~-~ViV~~r~~~s~~~A~~~G~~-v~-----s--l~Eaak-----~ADVV~llL 79 (335)
T PRK13403 14 LQGKTVAVIGYGSQGHAQAQNLRDSGV-EVVVGVRPGKSFEVAKADGFE-VM-----S--VSEAVR-----TAQVVQMLL 79 (335)
T ss_pred hCcCEEEEEeEcHHHHHHHHHHHHCcC-EEEEEECcchhhHHHHHcCCE-EC-----C--HHHHHh-----cCCEEEEeC
Confidence 468899999999999999999999999 787776665566666667763 21 1 333332 379999988
Q ss_pred cChHh---H-HHHHHHhhCCCceEEEEc
Q 018529 248 GNIDN---M-ISAFECVHDGWGVAVLVG 271 (354)
Q Consensus 248 g~~~~---~-~~~~~~l~~~~g~~v~~g 271 (354)
+.+.. + ...+..|+++ .++.++
T Consensus 80 Pd~~t~~V~~~eil~~MK~G--aiL~f~ 105 (335)
T PRK13403 80 PDEQQAHVYKAEVEENLREG--QMLLFS 105 (335)
T ss_pred CChHHHHHHHHHHHhcCCCC--CEEEEC
Confidence 75332 2 2345566664 444444
No 482
>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed
Probab=94.72 E-value=0.18 Score=43.05 Aligned_cols=105 Identities=16% Similarity=0.209 Sum_probs=66.5
Q ss_pred hhcCCCCCCeEEEEcCChhHHHHHHHHHHcC-CcEEEEEcCChhhHHHHHhcCC----ceEEcCCCCChhHHHHHHHHcC
Q 018529 163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKFGV----TDFVNTSEHDRPIQEVIAEMTN 237 (354)
Q Consensus 163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g-~~~vi~v~~~~~~~~~~~~lg~----~~v~~~~~~~~~~~~~i~~~~~ 237 (354)
......++.+||-+|+|. |..+..+++..+ ..++++++.+++..+.+++.-. ...+.....+ +.+. ....
T Consensus 45 ~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d--~~~~--~~~~ 119 (239)
T PRK00216 45 KWLGVRPGDKVLDLACGT-GDLAIALAKAVGKTGEVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQGD--AEAL--PFPD 119 (239)
T ss_pred HHhCCCCCCeEEEeCCCC-CHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHhhcccccccCeEEEecc--cccC--CCCC
Confidence 334456788999999987 888888888775 2399999999988887766321 1111111111 1110 0122
Q ss_pred CCccEEEEccc------ChHhHHHHHHHhhCCCceEEEEcCC
Q 018529 238 GGVDRSVECTG------NIDNMISAFECVHDGWGVAVLVGVP 273 (354)
Q Consensus 238 ~~~dvv~d~~g------~~~~~~~~~~~l~~~~g~~v~~g~~ 273 (354)
+.+|+|+.... ....+..+.+.|+++ |+++++...
T Consensus 120 ~~~D~I~~~~~l~~~~~~~~~l~~~~~~L~~g-G~li~~~~~ 160 (239)
T PRK00216 120 NSFDAVTIAFGLRNVPDIDKALREMYRVLKPG-GRLVILEFS 160 (239)
T ss_pred CCccEEEEecccccCCCHHHHHHHHHHhccCC-cEEEEEEec
Confidence 36899875321 235677888999997 998887654
No 483
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=94.72 E-value=0.22 Score=40.75 Aligned_cols=39 Identities=36% Similarity=0.422 Sum_probs=31.7
Q ss_pred eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHH
Q 018529 172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK 211 (354)
Q Consensus 172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~ 211 (354)
+|.|+|+|.+|...++++...|. .|+.++.+++..+..+
T Consensus 1 ~V~ViGaG~mG~~iA~~~a~~G~-~V~l~d~~~~~l~~~~ 39 (180)
T PF02737_consen 1 KVAVIGAGTMGRGIAALFARAGY-EVTLYDRSPEALERAR 39 (180)
T ss_dssp EEEEES-SHHHHHHHHHHHHTTS-EEEEE-SSHHHHHHHH
T ss_pred CEEEEcCCHHHHHHHHHHHhCCC-cEEEEECChHHHHhhh
Confidence 58899999999988888888899 9999999998876653
No 484
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.71 E-value=0.23 Score=42.76 Aligned_cols=77 Identities=19% Similarity=0.215 Sum_probs=45.4
Q ss_pred CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEc-CChhhHHHH-HhcCCce-EE--cCCCCChhHHHHH---HHHcCCCc
Q 018529 170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD-RSSKRFEEA-KKFGVTD-FV--NTSEHDRPIQEVI---AEMTNGGV 240 (354)
Q Consensus 170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~-~~~~~~~~~-~~lg~~~-v~--~~~~~~~~~~~~i---~~~~~~~~ 240 (354)
+.++||+|+ |.+|...+..+...|+ +|+.+. +++++.+.+ .+++... .+ |..+. ..+.+.+ .+..++++
T Consensus 5 ~k~ilItGas~gIG~~la~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~~i 82 (253)
T PRK08642 5 EQTVLVTGGSRGLGAAIARAFAREGA-RVVVNYHQSEDAAEALADELGDRAIALQADVTDR-EQVQAMFATATEHFGKPI 82 (253)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCH-HHHHHHHHHHHHHhCCCC
Confidence 568999987 9999999988888899 666553 445444433 3343221 12 32221 1233333 22222248
Q ss_pred cEEEEccc
Q 018529 241 DRSVECTG 248 (354)
Q Consensus 241 dvv~d~~g 248 (354)
|+++.+.|
T Consensus 83 d~li~~ag 90 (253)
T PRK08642 83 TTVVNNAL 90 (253)
T ss_pred eEEEECCC
Confidence 99999875
No 485
>PRK14982 acyl-ACP reductase; Provisional
Probab=94.71 E-value=0.17 Score=45.63 Aligned_cols=94 Identities=20% Similarity=0.252 Sum_probs=60.2
Q ss_pred CCCCeEEEEcC-ChhHHHHHHHHH-HcCCcEEEEEcCChhhHHHHH-hcCCceEEcCCCCChhHHHHHHHHcCCCccEEE
Q 018529 168 ERGSSVAVFGL-GAVGLAAAEGAR-IAGASRIIGVDRSSKRFEEAK-KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV 244 (354)
Q Consensus 168 ~~~~~vlI~G~-g~~G~~a~~~a~-~~g~~~vi~v~~~~~~~~~~~-~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~ 244 (354)
-.+.+|+|+|+ |.+|...++.+. ..|..+++.+.++.++.+.+. +++...+. ++. +.. ..+|+|+
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~-------~l~----~~l-~~aDiVv 220 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKIL-------SLE----EAL-PEADIVV 220 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHH-------hHH----HHH-ccCCEEE
Confidence 46789999998 899998877775 456668999999888776654 33311111 122 221 2589999
Q ss_pred EcccChHhHHHHHHHhhCCCceEEEEcCCC
Q 018529 245 ECTGNIDNMISAFECVHDGWGVAVLVGVPS 274 (354)
Q Consensus 245 d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~ 274 (354)
.+++.+.....-...+++. -.++.++.+.
T Consensus 221 ~~ts~~~~~~I~~~~l~~~-~~viDiAvPR 249 (340)
T PRK14982 221 WVASMPKGVEIDPETLKKP-CLMIDGGYPK 249 (340)
T ss_pred ECCcCCcCCcCCHHHhCCC-eEEEEecCCC
Confidence 9998754432222345664 5666776654
No 486
>PRK09135 pteridine reductase; Provisional
Probab=94.70 E-value=0.26 Score=42.30 Aligned_cols=34 Identities=21% Similarity=0.150 Sum_probs=29.0
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS 203 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~ 203 (354)
.+.++||+|+ |.+|...+..+...|+ +|++++++
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~ 39 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHR 39 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCC
Confidence 4578999987 9999998888888899 88888775
No 487
>TIGR00091 tRNA (guanine-N(7)-)-methyltransferase. In E. coli, this protein flanks the DNA repair protein MutY, also called micA.
Probab=94.68 E-value=0.65 Score=38.48 Aligned_cols=98 Identities=12% Similarity=0.156 Sum_probs=63.0
Q ss_pred CCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCceEEcCCCCChhHHHHHHHHcCC-CccEE
Q 018529 169 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRS 243 (354)
Q Consensus 169 ~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~~-~~dvv 243 (354)
....+|=+|+|. |..+..+|+......|++++.+++..+.+++ .+...+-. ...+ ..+........ .+|.|
T Consensus 16 ~~~~ilDiGcG~-G~~~~~la~~~p~~~v~gvD~~~~~l~~a~~~~~~~~l~ni~~-i~~d--~~~~~~~~~~~~~~d~v 91 (194)
T TIGR00091 16 KAPLHLEIGCGK-GRFLIDMAKQNPDKNFLGIEIHTPIVLAANNKANKLGLKNLHV-LCGD--ANELLDKFFPDGSLSKV 91 (194)
T ss_pred CCceEEEeCCCc-cHHHHHHHHhCCCCCEEEEEeeHHHHHHHHHHHHHhCCCCEEE-EccC--HHHHHHhhCCCCceeEE
Confidence 344666679876 8888888887644489999999987766543 34332211 1112 33333333333 68888
Q ss_pred EEcccC--------------hHhHHHHHHHhhCCCceEEEEc
Q 018529 244 VECTGN--------------IDNMISAFECVHDGWGVAVLVG 271 (354)
Q Consensus 244 ~d~~g~--------------~~~~~~~~~~l~~~~g~~v~~g 271 (354)
+-..+. +..+..+.+.|+++ |.+.+.-
T Consensus 92 ~~~~pdpw~k~~h~~~r~~~~~~l~~~~r~Lkpg-G~l~~~t 132 (194)
T TIGR00091 92 FLNFPDPWPKKRHNKRRITQPHFLKEYANVLKKG-GVIHFKT 132 (194)
T ss_pred EEECCCcCCCCCccccccCCHHHHHHHHHHhCCC-CEEEEEe
Confidence 765432 35788899999997 9987664
No 488
>PRK05650 short chain dehydrogenase; Provisional
Probab=94.67 E-value=0.21 Score=43.73 Aligned_cols=76 Identities=21% Similarity=0.247 Sum_probs=47.5
Q ss_pred eEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce-EE--cCCCCChhHHHHHHHHc--CCCcc
Q 018529 172 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMT--NGGVD 241 (354)
Q Consensus 172 ~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v~--~~~~~~~~~~~~i~~~~--~~~~d 241 (354)
++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+ +..+.+. .+ |..+. ..+.+.+.... .+++|
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~i~~~~~~id 79 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDY-SQLTALAQACEEKWGGID 79 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCH-HHHHHHHHHHHHHcCCCC
Confidence 6899987 9999998888888899 888888887765432 2233322 12 22221 11222222221 13799
Q ss_pred EEEEcccC
Q 018529 242 RSVECTGN 249 (354)
Q Consensus 242 vv~d~~g~ 249 (354)
+++.++|.
T Consensus 80 ~lI~~ag~ 87 (270)
T PRK05650 80 VIVNNAGV 87 (270)
T ss_pred EEEECCCC
Confidence 99999874
No 489
>PRK15451 tRNA cmo(5)U34 methyltransferase; Provisional
Probab=94.65 E-value=0.22 Score=43.01 Aligned_cols=98 Identities=20% Similarity=0.223 Sum_probs=62.5
Q ss_pred CCCCCeEEEEcCChhHHHHHHHHHHc---CCcEEEEEcCChhhHHHHHhc----CCceEEcCCCCChhHHHHHHHHcCCC
Q 018529 167 PERGSSVAVFGLGAVGLAAAEGARIA---GASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNGG 239 (354)
Q Consensus 167 ~~~~~~vlI~G~g~~G~~a~~~a~~~---g~~~vi~v~~~~~~~~~~~~l----g~~~v~~~~~~~~~~~~~i~~~~~~~ 239 (354)
+.++.+||-+|+|. |..+..+++.. +. ++++++.+++-.+.+++. +...-+.....+ + .++..+.
T Consensus 54 ~~~~~~vLDlGcGt-G~~~~~l~~~~~~~~~-~v~gvD~S~~ml~~A~~~~~~~~~~~~v~~~~~d--~----~~~~~~~ 125 (247)
T PRK15451 54 VQPGTQVYDLGCSL-GAATLSVRRNIHHDNC-KIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGD--I----RDIAIEN 125 (247)
T ss_pred CCCCCEEEEEcccC-CHHHHHHHHhcCCCCC-eEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEeCC--h----hhCCCCC
Confidence 56888999999874 66677777743 45 999999999888877552 321111111111 1 1122235
Q ss_pred ccEEEEccc-----C---hHhHHHHHHHhhCCCceEEEEcCC
Q 018529 240 VDRSVECTG-----N---IDNMISAFECVHDGWGVAVLVGVP 273 (354)
Q Consensus 240 ~dvv~d~~g-----~---~~~~~~~~~~l~~~~g~~v~~g~~ 273 (354)
+|+|+.... . ...+..+.+.|+++ |.+++....
T Consensus 126 ~D~vv~~~~l~~l~~~~~~~~l~~i~~~LkpG-G~l~l~e~~ 166 (247)
T PRK15451 126 ASMVVLNFTLQFLEPSERQALLDKIYQGLNPG-GALVLSEKF 166 (247)
T ss_pred CCEEehhhHHHhCCHHHHHHHHHHHHHhcCCC-CEEEEEEec
Confidence 787775321 1 24688899999997 999887643
No 490
>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase.
Probab=94.64 E-value=0.98 Score=39.48 Aligned_cols=101 Identities=20% Similarity=0.245 Sum_probs=63.3
Q ss_pred hcCCCCCCeEEEEcCChhHHHHHHHHHHcC-CcEEEEEcCChhhHHHHH----hcCCceEEcCCCCChhHHHHHHHHcCC
Q 018529 164 VAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAEMTNG 238 (354)
Q Consensus 164 ~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g-~~~vi~v~~~~~~~~~~~----~lg~~~v~~~~~~~~~~~~~i~~~~~~ 238 (354)
...+++|++||=.|+|+ |..++.++..++ ...|++++.++++.+.++ ++|...+..... + ... +... .+
T Consensus 66 ~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~~-D--~~~-~~~~-~~ 139 (264)
T TIGR00446 66 ALEPDPPERVLDMAAAP-GGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGVLNVAVTNF-D--GRV-FGAA-VP 139 (264)
T ss_pred HhCCCCcCEEEEECCCc-hHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEecC-C--HHH-hhhh-cc
Confidence 34678999988887764 555556666553 238999999999987764 467654322222 1 111 1111 23
Q ss_pred CccEEEE---cccC-------------------------hHhHHHHHHHhhCCCceEEEEc
Q 018529 239 GVDRSVE---CTGN-------------------------IDNMISAFECVHDGWGVAVLVG 271 (354)
Q Consensus 239 ~~dvv~d---~~g~-------------------------~~~~~~~~~~l~~~~g~~v~~g 271 (354)
.||.|+- |.|. .+.+..+++.++++ |+++...
T Consensus 140 ~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpg-G~lvYst 199 (264)
T TIGR00446 140 KFDAILLDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPG-GVLVYST 199 (264)
T ss_pred CCCEEEEcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEe
Confidence 6999974 3332 13677888899997 9987554
No 491
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=94.63 E-value=0.3 Score=41.86 Aligned_cols=79 Identities=16% Similarity=0.223 Sum_probs=46.4
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEE-cCChh-hHHHHH---hcCCceE---EcCCCCChhHHHHHHHHc--C
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSK-RFEEAK---KFGVTDF---VNTSEHDRPIQEVIAEMT--N 237 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v-~~~~~-~~~~~~---~lg~~~v---~~~~~~~~~~~~~i~~~~--~ 237 (354)
+++++||+|+ |.+|...++.+...|+ +|+.. .++.+ +.+.+. +.+.... .|..+. .++.+.+.+.. .
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~ 79 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGF-KVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDW-DSTKAAFDKVKAEV 79 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCH-HHHHHHHHHHHHHh
Confidence 3578899987 9999999999999999 66654 33333 222332 3354322 222221 12222222221 1
Q ss_pred CCccEEEEcccC
Q 018529 238 GGVDRSVECTGN 249 (354)
Q Consensus 238 ~~~dvv~d~~g~ 249 (354)
++.|++++++|.
T Consensus 80 ~~id~li~~ag~ 91 (246)
T PRK12938 80 GEIDVLVNNAGI 91 (246)
T ss_pred CCCCEEEECCCC
Confidence 479999999875
No 492
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.63 E-value=0.22 Score=42.61 Aligned_cols=78 Identities=24% Similarity=0.344 Sum_probs=47.1
Q ss_pred CCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEE-cCChhhHHHHH----hcCCce-EE--cCCCCChhHHHHHHHHcC--C
Q 018529 170 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKRFEEAK----KFGVTD-FV--NTSEHDRPIQEVIAEMTN--G 238 (354)
Q Consensus 170 ~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v-~~~~~~~~~~~----~lg~~~-v~--~~~~~~~~~~~~i~~~~~--~ 238 (354)
+.++||+|+ |.+|...+..+...|+ +|+.+ +++.++.+.+. +.+... ++ |..+. ..+.+.+..... +
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~ 82 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSE-EDVENLVEQIVEKFG 82 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCH-HHHHHHHHHHHHHhC
Confidence 468999987 9999998888778898 77777 88776654332 222211 22 22221 122222222211 3
Q ss_pred CccEEEEcccC
Q 018529 239 GVDRSVECTGN 249 (354)
Q Consensus 239 ~~dvv~d~~g~ 249 (354)
++|+||.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (247)
T PRK05565 83 KIDILVNNAGI 93 (247)
T ss_pred CCCEEEECCCc
Confidence 69999998874
No 493
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=94.62 E-value=0.3 Score=46.35 Aligned_cols=86 Identities=17% Similarity=0.276 Sum_probs=0.0
Q ss_pred eEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcccCh
Q 018529 172 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI 250 (354)
Q Consensus 172 ~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g~~ 250 (354)
+|+|.|+|.+|...++.+...|. .|+++++++++.+.+++ .+...+..... -.+.+.+..-+++|.|+-+++..
T Consensus 2 ~viIiG~G~ig~~~a~~L~~~g~-~v~vid~~~~~~~~~~~~~~~~~~~gd~~----~~~~l~~~~~~~a~~vi~~~~~~ 76 (453)
T PRK09496 2 KIIIVGAGQVGYTLAENLSGENN-DVTVIDTDEERLRRLQDRLDVRTVVGNGS----SPDVLREAGAEDADLLIAVTDSD 76 (453)
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHhhcCEEEEEeCCC----CHHHHHHcCCCcCCEEEEecCCh
Q ss_pred HhHHHHHHHhhC
Q 018529 251 DNMISAFECVHD 262 (354)
Q Consensus 251 ~~~~~~~~~l~~ 262 (354)
..-..+...++.
T Consensus 77 ~~n~~~~~~~r~ 88 (453)
T PRK09496 77 ETNMVACQIAKS 88 (453)
T ss_pred HHHHHHHHHHHH
No 494
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=94.61 E-value=0.21 Score=43.02 Aligned_cols=77 Identities=21% Similarity=0.237 Sum_probs=47.9
Q ss_pred CeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChhhHHHH----HhcCCce-E--EcCCCCChhHHHHHHHHc--CCCc
Q 018529 171 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMT--NGGV 240 (354)
Q Consensus 171 ~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~~~ 240 (354)
++++|+|+ |.+|...++.+...|+ +|+.+.+++++.+.+ ++.+... . .|..+. ..+.+.+.+.. .+..
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~i~~~~~~~~~~~~~i 78 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDK-DQVFSAIDQAAEKFGGF 78 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCH-HHHHHHHHHHHHHcCCC
Confidence 36899987 9999999988889999 888888877654432 2234321 1 222222 12223233322 1368
Q ss_pred cEEEEcccC
Q 018529 241 DRSVECTGN 249 (354)
Q Consensus 241 dvv~d~~g~ 249 (354)
|+++.++|.
T Consensus 79 d~vi~~ag~ 87 (254)
T TIGR02415 79 DVMVNNAGV 87 (254)
T ss_pred CEEEECCCc
Confidence 999998874
No 495
>PRK06436 glycerate dehydrogenase; Provisional
Probab=94.60 E-value=0.24 Score=44.13 Aligned_cols=87 Identities=17% Similarity=0.175 Sum_probs=56.7
Q ss_pred CCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCceEEcCCCCChhHHHHHHHHcCCCccEEEEcc
Q 018529 168 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 247 (354)
Q Consensus 168 ~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~ 247 (354)
-.|.+|.|+|.|.+|...+++++.+|. +|++.+++... .+.... +. ++.+.+. ..|+|+.+.
T Consensus 120 L~gktvgIiG~G~IG~~vA~~l~afG~-~V~~~~r~~~~------~~~~~~--~~----~l~ell~-----~aDiv~~~l 181 (303)
T PRK06436 120 LYNKSLGILGYGGIGRRVALLAKAFGM-NIYAYTRSYVN------DGISSI--YM----EPEDIMK-----KSDFVLISL 181 (303)
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcc------cCcccc--cC----CHHHHHh-----hCCEEEECC
Confidence 358999999999999999999999999 99999876321 122110 11 1333222 368888777
Q ss_pred cChHh-----HHHHHHHhhCCCceEEEEcCC
Q 018529 248 GNIDN-----MISAFECVHDGWGVAVLVGVP 273 (354)
Q Consensus 248 g~~~~-----~~~~~~~l~~~~g~~v~~g~~ 273 (354)
+..+. -...++.++++ ..++.++..
T Consensus 182 p~t~~T~~li~~~~l~~mk~g-a~lIN~sRG 211 (303)
T PRK06436 182 PLTDETRGMINSKMLSLFRKG-LAIINVARA 211 (303)
T ss_pred CCCchhhcCcCHHHHhcCCCC-eEEEECCCc
Confidence 64321 13456677775 777777654
No 496
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=94.60 E-value=0.31 Score=41.65 Aligned_cols=79 Identities=28% Similarity=0.324 Sum_probs=46.2
Q ss_pred CCCeEEEEcC-ChhHHHHHHHHHHcCCcEEEEEcCChh-hHH-H---HHhcCCce-EE--cCCCCChhHHHHHHHHcC--
Q 018529 169 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK-RFE-E---AKKFGVTD-FV--NTSEHDRPIQEVIAEMTN-- 237 (354)
Q Consensus 169 ~~~~vlI~G~-g~~G~~a~~~a~~~g~~~vi~v~~~~~-~~~-~---~~~lg~~~-v~--~~~~~~~~~~~~i~~~~~-- 237 (354)
.+.++||+|+ |.+|...+..+...|+ +|+++.++.+ +.+ . ++..+... .+ |..+. ..+.+.+++...
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~ 81 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDA-ESVERAVDEAKAEF 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCH-HHHHHHHHHHHHHc
Confidence 3568999987 9999999999998999 6756555443 222 1 22233322 22 22222 123233333221
Q ss_pred CCccEEEEcccC
Q 018529 238 GGVDRSVECTGN 249 (354)
Q Consensus 238 ~~~dvv~d~~g~ 249 (354)
+++|.++.++|.
T Consensus 82 ~~id~vi~~ag~ 93 (248)
T PRK05557 82 GGVDILVNNAGI 93 (248)
T ss_pred CCCCEEEECCCc
Confidence 368999998874
No 497
>PRK10901 16S rRNA methyltransferase B; Provisional
Probab=94.59 E-value=0.52 Score=44.37 Aligned_cols=102 Identities=16% Similarity=0.287 Sum_probs=62.9
Q ss_pred hhcCCCCCCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh----cCCc-eEEcCCCCChhHHHHHHHHcC
Q 018529 163 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHDRPIQEVIAEMTN 237 (354)
Q Consensus 163 ~~~~~~~~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~~~~~~~~~~----lg~~-~v~~~~~~~~~~~~~i~~~~~ 237 (354)
....+++|++||=+|+|+ |..+..++...+..+|++++.++++.+.+++ +|.. .++..+..+ ... ....
T Consensus 238 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~v~a~D~s~~~l~~~~~n~~~~g~~~~~~~~D~~~--~~~---~~~~ 311 (427)
T PRK10901 238 TLLAPQNGERVLDACAAP-GGKTAHILELAPQAQVVALDIDAQRLERVRENLQRLGLKATVIVGDARD--PAQ---WWDG 311 (427)
T ss_pred HHcCCCCCCEEEEeCCCC-ChHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEcCccc--chh---hccc
Confidence 345678999998888754 4455666666542499999999998877643 5543 222211111 110 0112
Q ss_pred CCccEEEE---cccC-------------------------hHhHHHHHHHhhCCCceEEEEc
Q 018529 238 GGVDRSVE---CTGN-------------------------IDNMISAFECVHDGWGVAVLVG 271 (354)
Q Consensus 238 ~~~dvv~d---~~g~-------------------------~~~~~~~~~~l~~~~g~~v~~g 271 (354)
+.||.|+- |.|. ...+..+++.|+++ |+++..-
T Consensus 312 ~~fD~Vl~D~Pcs~~G~~~~~p~~~~~~~~~~l~~l~~~q~~iL~~a~~~LkpG-G~lvyst 372 (427)
T PRK10901 312 QPFDRILLDAPCSATGVIRRHPDIKWLRRPEDIAALAALQSEILDALWPLLKPG-GTLLYAT 372 (427)
T ss_pred CCCCEEEECCCCCcccccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEe
Confidence 36999973 3321 13577888899997 9988653
No 498
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=94.59 E-value=0.15 Score=38.91 Aligned_cols=78 Identities=24% Similarity=0.355 Sum_probs=49.1
Q ss_pred CeEEEEcCChhHHHHHHHHHHcCCcEEEEE-cCChhhHHHHHh-cCCceEEcCCCCChhHHHHHHHHcCCCccEEEEccc
Q 018529 171 SSVAVFGLGAVGLAAAEGARIAGASRIIGV-DRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 248 (354)
Q Consensus 171 ~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v-~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~i~~~~~~~~dvv~d~~g 248 (354)
-+|-|+|+|-+|......++..|. .|..+ .++.++.+++.. ++...+.+..+ .. ..+|++|-++.
T Consensus 11 l~I~iIGaGrVG~~La~aL~~ag~-~v~~v~srs~~sa~~a~~~~~~~~~~~~~~-----------~~-~~aDlv~iavp 77 (127)
T PF10727_consen 11 LKIGIIGAGRVGTALARALARAGH-EVVGVYSRSPASAERAAAFIGAGAILDLEE-----------IL-RDADLVFIAVP 77 (127)
T ss_dssp -EEEEECTSCCCCHHHHHHHHTTS-EEEEESSCHH-HHHHHHC--TT-----TTG-----------GG-CC-SEEEE-S-
T ss_pred cEEEEECCCHHHHHHHHHHHHCCC-eEEEEEeCCccccccccccccccccccccc-----------cc-ccCCEEEEEec
Confidence 478899999999999999999998 77777 455666666655 34333332211 11 25899999998
Q ss_pred ChHhHHHHHHHhhC
Q 018529 249 NIDNMISAFECVHD 262 (354)
Q Consensus 249 ~~~~~~~~~~~l~~ 262 (354)
. +.+...+..|..
T Consensus 78 D-daI~~va~~La~ 90 (127)
T PF10727_consen 78 D-DAIAEVAEQLAQ 90 (127)
T ss_dssp C-CHHHHHHHHHHC
T ss_pred h-HHHHHHHHHHHH
Confidence 8 677777777765
No 499
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=94.58 E-value=0.49 Score=39.38 Aligned_cols=34 Identities=32% Similarity=0.474 Sum_probs=30.0
Q ss_pred CCeEEEEcCChhHHHHHHHHHHcCCcEEEEEcCC
Q 018529 170 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 203 (354)
Q Consensus 170 ~~~vlI~G~g~~G~~a~~~a~~~g~~~vi~v~~~ 203 (354)
..+|+|+|+|++|...+..+-..|.++++.+|.+
T Consensus 19 ~s~VlviG~gglGsevak~L~~~GVg~i~lvD~d 52 (198)
T cd01485 19 SAKVLIIGAGALGAEIAKNLVLAGIDSITIVDHR 52 (198)
T ss_pred hCcEEEECCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 3789999999999999999999999889888754
No 500
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.54 E-value=0.27 Score=42.81 Aligned_cols=79 Identities=20% Similarity=0.349 Sum_probs=47.1
Q ss_pred CCCeEEEEcC---ChhHHHHHHHHHHcCCcEEEEEcCC---hhhHHHH-HhcCCceE--EcCCCCChhHHHHHHHHcC--
Q 018529 169 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRS---SKRFEEA-KKFGVTDF--VNTSEHDRPIQEVIAEMTN-- 237 (354)
Q Consensus 169 ~~~~vlI~G~---g~~G~~a~~~a~~~g~~~vi~v~~~---~~~~~~~-~~lg~~~v--~~~~~~~~~~~~~i~~~~~-- 237 (354)
+++++||+|+ +++|.+.++.+...|+ +|+.+.+. +++.+.+ ++++.... .|..+.+ ++.+.+.....
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~ 82 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDE-QIDALFASLGQHW 82 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCC-eEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHH-HHHHHHHHHHHHh
Confidence 4688999984 5899998888888899 77776543 3333322 33443222 2333322 23333333222
Q ss_pred CCccEEEEcccC
Q 018529 238 GGVDRSVECTGN 249 (354)
Q Consensus 238 ~~~dvv~d~~g~ 249 (354)
+.+|++++++|.
T Consensus 83 g~iD~lvnnAG~ 94 (260)
T PRK06997 83 DGLDGLVHSIGF 94 (260)
T ss_pred CCCcEEEEcccc
Confidence 479999998864
Done!