Your job contains 1 sequence.
>018533
MPRPYFHKLILASTIRDKRLRIPENFVRNFKDDLSAAATLIVPNGMVSRVGLRRLDNKVW
FYDGWQEFMERYFIRIGYFLVFRYEGNSAFNVYIFNLPSSEINYQPNALSNFEVPNHSKQ
YHIFAEMEDDDSEHVDQPTVNKTFNPPSFQNLLNSSKLSNSINGAGEANLQRLKVKLYSQ
DGETPKLKKPGRKRKIDPNVQASSAQEVHDGEMQFRFYESASARKRTVTAEERERAINAA
KAFEPSNPFCRVVLRPSYLYKGCIMYLPSCFAEKHLNGVCGFIKLQLSDGKQWPVRCLYR
GGRAKFSQGWYEFTVENRLGEGDVCVFEVLRAREFVLKVTVFRVSESAGFMSRH
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 018533
(354 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2085849 - symbol:VRN1 "REDUCED VERNALIZATION R... 1054 1.5e-106 1
TAIR|locus:2010262 - symbol:RTV1 "AT1G49480" species:3702... 623 7.1e-61 1
TAIR|locus:2133362 - symbol:AT4G01580 species:3702 "Arabi... 242 1.7e-20 1
TAIR|locus:2085859 - symbol:AT3G18960 species:3702 "Arabi... 230 3.1e-19 1
TAIR|locus:504956318 - symbol:AT1G49475 species:3702 "Ara... 227 6.5e-19 1
TAIR|locus:2119166 - symbol:AT4G33280 species:3702 "Arabi... 121 1.7e-12 2
TAIR|locus:2161533 - symbol:VDD "VERDANDI" species:3702 "... 111 4.9e-10 2
TAIR|locus:2172319 - symbol:AT5G18090 species:3702 "Arabi... 108 8.0e-10 2
TAIR|locus:2086082 - symbol:REM22 "REPRODUCTIVE MERISTEM ... 137 6.6e-09 2
TAIR|locus:2124824 - symbol:AT4G31680 species:3702 "Arabi... 112 2.5e-08 2
TAIR|locus:2063434 - symbol:AT2G35310 species:3702 "Arabi... 98 5.3e-08 2
TAIR|locus:2144831 - symbol:AT5G09780 species:3702 "Arabi... 102 1.5e-07 2
TAIR|locus:2052991 - symbol:AT2G16210 species:3702 "Arabi... 100 2.1e-07 2
TAIR|locus:2124839 - symbol:AT4G31690 species:3702 "Arabi... 109 2.3e-07 2
TAIR|locus:2124879 - symbol:AT4G31640 species:3702 "Arabi... 99 3.2e-07 2
TAIR|locus:2124864 - symbol:AT4G31630 species:3702 "Arabi... 101 2.4e-06 2
TAIR|locus:2161228 - symbol:AT5G58280 species:3702 "Arabi... 132 3.5e-06 1
TAIR|locus:2158108 - symbol:AT5G66980 species:3702 "Arabi... 101 3.5e-06 2
TAIR|locus:2200620 - symbol:AT1G26680 species:3702 "Arabi... 137 7.6e-06 1
TAIR|locus:2165497 - symbol:AT5G42700 species:3702 "Arabi... 122 2.1e-05 1
TAIR|locus:2126016 - symbol:MEE45 "maternal effect embryo... 93 2.4e-05 2
TAIR|locus:2083921 - symbol:AT3G53310 species:3702 "Arabi... 123 4.2e-05 1
TAIR|locus:2124889 - symbol:AT4G31650 species:3702 "Arabi... 85 7.7e-05 2
TAIR|locus:2047241 - symbol:AT2G24700 species:3702 "Arabi... 85 0.00026 2
>TAIR|locus:2085849 [details] [associations]
symbol:VRN1 "REDUCED VERNALIZATION RESPONSE 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0009909 "regulation of flower development"
evidence=IMP] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0010048
"vernalization response" evidence=IMP] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010048 GO:GO:0009909 EMBL:AP000735
UniGene:At.27524 UniGene:At.24480 HOGENOM:HOG000005864
EMBL:AF289051 EMBL:AF289052 EMBL:BT024731 EMBL:AK230388
EMBL:AB493620 IPI:IPI00546581 RefSeq:NP_188529.2 PDB:4I1K
PDBsum:4I1K ProteinModelPortal:Q8L3W1 SMR:Q8L3W1 IntAct:Q8L3W1
STRING:Q8L3W1 PaxDb:Q8L3W1 PRIDE:Q8L3W1 DNASU:821432
EnsemblPlants:AT3G18990.1 GeneID:821432 KEGG:ath:AT3G18990
TAIR:At3g18990 eggNOG:NOG315946 InParanoid:Q8L3W1 OMA:EINSSAP
PhylomeDB:Q8L3W1 ProtClustDB:CLSN2679965 Genevestigator:Q8L3W1
Uniprot:Q8L3W1
Length = 341
Score = 1054 (376.1 bits), Expect = 1.5e-106, P = 1.5e-106
Identities = 215/351 (61%), Positives = 259/351 (73%)
Query: 1 MPRPYFHKLILASTIRDKRLRIPENFVRNFKDDLSAAATLIVPNGMVSRVGLRRLDNKVW 60
MPRP+FHKLI +STI++KRLR+P+ FV FKD+LS A L VP+G V RVGLR+ DNK+W
Sbjct: 1 MPRPFFHKLIFSSTIQEKRLRVPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADNKIW 60
Query: 61 FYDGWQEFMERYFIRIGYFLVFRYEGNSAFNVYIFNLPSSEINYQPNALSNFEVPNHSKQ 120
F DGWQEF++RY IRIGY L+FRYEGNSAF+VYIFNL SEINY L + NH K+
Sbjct: 61 FQDGWQEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINYHSTGLMD-SAHNHFKR 119
Query: 121 YHIFAEMEDDDSEHVDQPTVNKTFNPPSFQXXXXXXXXXXXXXGAGEANLQRL---KVKL 177
+F ++ED+D+E + +V + P S G + +Q L VK
Sbjct: 120 ARLFEDLEDEDAEVIFPSSVYPSPLPES---------TVPANKGYASSAIQTLFTGPVKA 170
Query: 178 YSQDGETPKL-KKPGRKRK-IDPNVQASSAQEVHDGEMQFRFYESASARKRTVTAEERER 235
+ TPK+ KK GRK+K DP SSA D E + +FYESASARKRTVTAEERER
Sbjct: 171 -EEPTPTPKIPKKRGRKKKNADPEEINSSAPRDDDPENRSKFYESASARKRTVTAEERER 229
Query: 236 AINAAKAFEPSNPFCRVVLRPSYLYKGCIMYLPSCFAEKHLNGVCGFIKLQLSDGKQWPV 295
AINAAK FEP+NPF RVVLRPSYLY+GCIMYLPS FAEK+L+G+ GFIK+QL++ KQWPV
Sbjct: 230 AINAAKTFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKVQLAE-KQWPV 288
Query: 296 RCLYRGGRAKFSQGWYEFTVENRLGEGDVCVFEVLRAREFVLKVTVFRVSE 346
RCLY+ GRAKFSQGWYEFT+EN LGEGDVCVFE+LR R+FVLKVT FRV+E
Sbjct: 289 RCLYKAGRAKFSQGWYEFTLENNLGEGDVCVFELLRTRDFVLKVTAFRVNE 339
>TAIR|locus:2010262 [details] [associations]
symbol:RTV1 "AT1G49480" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0032880 "regulation of protein localization" evidence=RCA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0034613 "cellular protein localization"
evidence=IDA] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005634 GO:GO:0034613 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC007504 EMBL:AY042868 EMBL:BT015682
IPI:IPI00517706 PIR:E96531 RefSeq:NP_564547.1 UniGene:At.24480
UniGene:At.70635 ProteinModelPortal:Q9XIB5 SMR:Q9XIB5 PaxDb:Q9XIB5
PRIDE:Q9XIB5 EnsemblPlants:AT1G49480.1 GeneID:841372
KEGG:ath:AT1G49480 TAIR:At1g49480 eggNOG:NOG265541
HOGENOM:HOG000005864 InParanoid:Q9XIB5 OMA:FKESKAE PhylomeDB:Q9XIB5
ProtClustDB:CLSN2917203 Genevestigator:Q9XIB5 Uniprot:Q9XIB5
Length = 226
Score = 623 (224.4 bits), Expect = 7.1e-61, P = 7.1e-61
Identities = 123/171 (71%), Positives = 144/171 (84%)
Query: 179 SQDGETPK-LKKPGRKRKIDPNVQA--SSAQEVHDGEMQFRFYESASARKRTVTAEERER 235
S+ ETPK LKK GRK+K +PN + SS D E + +FYESASARKRTVTAEERER
Sbjct: 56 SKAEETPKVLKKRGRKKK-NPNPEEVNSSTPGGDDSENRSKFYESASARKRTVTAEERER 114
Query: 236 AINAAKAFEPSNPFCRVVLRPSYLYKGCIMYLPSCFAEKHLNGVCGFIKLQLSDGKQWPV 295
A+NAAK FEP+NP+ RVVLRPSYLY+GCIMYLPS FAEK+L+G+ GFIKLQL + KQWPV
Sbjct: 115 AVNAAKTFEPTNPYFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKLQLGE-KQWPV 173
Query: 296 RCLYRGGRAKFSQGWYEFTVENRLGEGDVCVFEVLRAREFVLKVTVFRVSE 346
RCLY+ GRAKFSQGWYEFT+EN +GEGDVCVFE+LR R+FVL+VT FRV+E
Sbjct: 174 RCLYKAGRAKFSQGWYEFTLENNIGEGDVCVFELLRTRDFVLEVTAFRVNE 224
>TAIR|locus:2133362 [details] [associations]
symbol:AT4G01580 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AL161492 EMBL:AF104919 UniGene:At.34404
HOGENOM:HOG000155078 ProtClustDB:CLSN2685511 EMBL:BT010604
EMBL:AK175333 IPI:IPI00544726 PIR:T02015 RefSeq:NP_192068.1
ProteinModelPortal:Q9ZSH7 SMR:Q9ZSH7 IntAct:Q9ZSH7 STRING:Q9ZSH7
EnsemblPlants:AT4G01580.1 GeneID:828118 KEGG:ath:AT4G01580
TAIR:At4g01580 PhylomeDB:Q9ZSH7 Genevestigator:Q9ZSH7
Uniprot:Q9ZSH7
Length = 190
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 46/108 (42%), Positives = 67/108 (62%)
Query: 2 PRPYFHKLILASTIRDKRLRIPENFVRNFKDDLSAAATLIVPNGMVSRVGLRRLDNKVWF 61
P F KL+L ST++DK +RIP FV+ LS TL+ P G + L+R+ ++WF
Sbjct: 26 PVKKFFKLVLPSTMKDKMMRIPPRFVKLQGSKLSEVVTLVTPAGYKRSIKLKRIGEEIWF 85
Query: 62 YDGWQEFMERYFIRIGYFLVFRYEGNSAFNVYIFNLPSSEINYQPNAL 109
++GW EF E + I G+FL+F Y+ NS+F V IFN + E NY +A+
Sbjct: 86 HEGWSEFAEAHSIEEGHFLLFEYKKNSSFRVIIFNASACETNYPLDAV 133
>TAIR|locus:2085859 [details] [associations]
symbol:AT3G18960 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AP000735 UniGene:At.34404 UniGene:At.66475
HOGENOM:HOG000155078 ProtClustDB:CLSN2685511 EMBL:BT006139
EMBL:BT008541 EMBL:AK229681 IPI:IPI00539394 RefSeq:NP_188526.2
ProteinModelPortal:Q84R27 SMR:Q84R27 IntAct:Q84R27
EnsemblPlants:AT3G18960.1 GeneID:821429 KEGG:ath:AT3G18960
TAIR:At3g18960 PhylomeDB:Q84R27 Genevestigator:Q84R27
Uniprot:Q84R27
Length = 209
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 44/108 (40%), Positives = 66/108 (61%)
Query: 2 PRPYFHKLILASTIRDKRLRIPENFVRNFKDDLSAAATLIVPNGMVSRVGLRRLDNKVWF 61
P F KL+L ST++DK ++IP FV+ LS TL P G + L+R+ ++WF
Sbjct: 26 PVKKFFKLVLPSTMKDKMMKIPPRFVKLQGSKLSEVVTLETPAGFKRSIKLKRIGEEIWF 85
Query: 62 YDGWQEFMERYFIRIGYFLVFRYEGNSAFNVYIFNLPSSEINYQPNAL 109
++GW EF E + I G+FL+F Y+ NS+F V IFN+ + E Y +A+
Sbjct: 86 HEGWSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSACETKYPLDAV 133
>TAIR|locus:504956318 [details] [associations]
symbol:AT1G49475 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC007504 EMBL:BX817688 IPI:IPI00524854
PIR:D96531 RefSeq:NP_683415.2 UniGene:At.49960
ProteinModelPortal:Q9XIB4 SMR:Q9XIB4 EnsemblPlants:AT1G49475.1
GeneID:841371 KEGG:ath:AT1G49475 TAIR:At1g49475 eggNOG:NOG287861
HOGENOM:HOG000155078 OMA:PRVNIKS PhylomeDB:Q9XIB4
ProtClustDB:CLSN2685511 Genevestigator:Q9XIB4 Uniprot:Q9XIB4
Length = 190
Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 53/139 (38%), Positives = 77/139 (55%)
Query: 6 FHKLILASTIRDKRLRIPENFVRNFKDDLSAAATLIVPNGMVSRVGLRRLDNKVWFYDGW 65
F K+IL S I +K +++P FVR F L+ TL P G + ++R+ ++VWF GW
Sbjct: 34 FIKIILLSRIIEKMMKVPARFVR-FGPKLTDNVTLQTPVGFKRSIRIKRIGDEVWFEKGW 92
Query: 66 QEFMERYFIRIGYFLVFRYEGNSAFNVYIFNLPSSEINYQPNALSNF--EVPNHSKQYHI 123
EF E + + G+FL F YEG+S F V IF++ +SEI Y + + EV + +Q
Sbjct: 93 SEFAEAHSLSDGHFLFFHYEGDSCFRVVIFDVSASEIEYPLDDTDDNREEVMDDDEQGFT 152
Query: 124 FAEMEDDDSEHVDQPTVNK 142
E DDD E VD + K
Sbjct: 153 GFESSDDDGEVVDMDELLK 171
>TAIR|locus:2119166 [details] [associations]
symbol:AT4G33280 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0005773 "vacuole" evidence=IDA] InterPro:IPR003340 Pfam:PF02362
PROSITE:PS50863 SMART:SM01019 GO:GO:0005634 GO:GO:0005773
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 EMBL:AL035678 EMBL:AL161583 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AJ441117 IPI:IPI00520178
PIR:T05979 RefSeq:NP_195054.2 UniGene:At.31598
ProteinModelPortal:Q8RYD1 SMR:Q8RYD1 EnsemblPlants:AT4G33280.1
GeneID:829464 KEGG:ath:AT4G33280 TAIR:At4g33280 eggNOG:NOG318846
HOGENOM:HOG000154089 InParanoid:Q8RYD1 OMA:EMISAGS PhylomeDB:Q8RYD1
ProtClustDB:CLSN2918854 Genevestigator:Q8RYD1 Uniprot:Q8RYD1
Length = 337
Score = 121 (47.7 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 36/125 (28%), Positives = 63/125 (50%)
Query: 228 VTAEERERAINAAK-AFEPSNPFCRVVLRPSYLYKGCIMYLPSCFAEKHLNGVCGFIKLQ 286
++A ++A++ AK A P F V ++ S++ C + +P + K++ + +Q
Sbjct: 202 ISAGSNKKALSLAKRAISPDG-FL-VFMKRSHVVSKCFLTIPYKWCVKNMLITRQEVVMQ 259
Query: 287 LSDGKQWPVRCLYRGGRAK--FSQGWYEFTVENRLGEGDVCVFEVLRA--REFVLKVTVF 342
+ D +W ++ G R S GW +F +N L EGDVCVFE + + L V +F
Sbjct: 260 V-DQTKWEMKFNIFGARGSGGISTGWKKFVQDNNLREGDVCVFEPANSETKPLHLNVYIF 318
Query: 343 RVSES 347
R E+
Sbjct: 319 RGEET 323
Score = 114 (45.2 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 30/93 (32%), Positives = 46/93 (49%)
Query: 5 YFHKLILASTIRDKRLRIPENFVRNFKDDLSAAATLIVPNGMVSRVGLRRLDNKVW-FYD 63
+F +L+L RL IP F + K L TL P+G+ VG+ D K F
Sbjct: 24 HFTQLLLPGF--HNRLVIPRKFSTHCKRKLPQIVTLKSPSGVTYNVGVEEDDEKTMAFRF 81
Query: 64 GWQEFMERYFIRIGYFLVFRYEGNSAFNVYIFN 96
GW +F++ + + LVF++ G S F V +F+
Sbjct: 82 GWDKFVKDHSLEENDLLVFKFHGVSEFEVLVFD 114
>TAIR|locus:2161533 [details] [associations]
symbol:VDD "VERDANDI" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0009553 "embryo sac development" evidence=IMP] [GO:0009567
"double fertilization forming a zygote and endosperm" evidence=IMP]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0009553 GO:GO:0009567 HOGENOM:HOG000131629
ProtClustDB:CLSN2681146 EMBL:AB015473 UniGene:At.19968
UniGene:At.71230 EMBL:AK227035 IPI:IPI00525697 RefSeq:NP_197301.1
ProteinModelPortal:Q9FJG2 SMR:Q9FJG2 EnsemblPlants:AT5G18000.1
GeneID:831667 KEGG:ath:AT5G18000 TAIR:At5g18000 eggNOG:NOG257290
InParanoid:Q9FJG2 OMA:FTHEANM PhylomeDB:Q9FJG2
Genevestigator:Q9FJG2 Uniprot:Q9FJG2
Length = 307
Score = 111 (44.1 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 34/143 (23%), Positives = 67/143 (46%)
Query: 201 QASSAQEVHDGEMQFRFYESASARKRTVTAEER-ERAINAAKAFEPSN-PFCRVVLRPSY 258
+++S + E+ R E+ K + +++ E N ++A S P ++ ++ S+
Sbjct: 166 ESTSGRLTQKQELNLRKKEADKTEKSKTSKKKKVETVSNDSEAGTSSLIPEFKLTIKKSH 225
Query: 259 LYKGCIMYLPSCFAEKHLNGVCGFIKLQLSDGKQ-WPVRCLYRGGRAKFSQGWYEFTVEN 317
L + +P F + H+ K+ GK+ W V + +++FS GW E
Sbjct: 226 LL---FLGIPKKFVDMHMPTETTMFKIHYPRGKKSWDVTYVVTDVQSRFSGGWSRLAKEL 282
Query: 318 RLGEGDVCVFEVLRAREFVLKVT 340
L GDVC F++++ E +KV+
Sbjct: 283 GLLVGDVCTFKLIKPTEMRVKVS 305
Score = 100 (40.3 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 28/102 (27%), Positives = 49/102 (48%)
Query: 4 PYFHKLILASTIRDKRLR-IPENFVRNFKDDLSAAATLI-VPNGMVSRVGLRRLDNKVWF 61
P F K++ + +R IP + +R+ D S+ ++ VP G +V + + N +
Sbjct: 18 PAFFKILRREDHSTEMMRMIPHHLIRSISDKSSSFKMVLRVPWGRSWQVKISKNPNFHYM 77
Query: 62 YD-GWQEFMERYFIRIGYFLVFRYEGNSAFNVYIFNLPSSEI 102
D GW +F+ + +L F +E N FNV IF +E+
Sbjct: 78 EDRGWNQFVNDNGLGENEYLTFTHEANMCFNVTIFEADGTEM 119
>TAIR|locus:2172319 [details] [associations]
symbol:AT5G18090 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AB012246 HOGENOM:HOG000131629
ProtClustDB:CLSN2681146 EMBL:BT004099 EMBL:BT005553 EMBL:AY087853
IPI:IPI00536965 RefSeq:NP_197310.1 UniGene:At.31471
ProteinModelPortal:Q9FK61 SMR:Q9FK61 EnsemblPlants:AT5G18090.1
GeneID:831636 KEGG:ath:AT5G18090 TAIR:At5g18090 eggNOG:NOG305722
InParanoid:Q9FK61 OMA:FCAGWIR PhylomeDB:Q9FK61
Genevestigator:Q9FK61 Uniprot:Q9FK61
Length = 301
Score = 108 (43.1 bits), Expect = 8.0e-10, Sum P(2) = 8.0e-10
Identities = 25/94 (26%), Positives = 44/94 (46%)
Query: 248 PFCRVVLRPSYLYKGCIMYLPSCFAEKHLNGVCGFIKLQLSDGKQ-WPVRCLYRGGRAKF 306
P + ++ SYL + +P F E H+ K+ +GK+ W V + + +F
Sbjct: 210 PEFTLTIKKSYLI---FLGIPKMFEELHMPTEATMFKIHDPEGKRSWDVMYKFSNNQTRF 266
Query: 307 SQGWYEFTVENRLGEGDVCVFEVLRAREFVLKVT 340
GW E L GDVC F +++ E +++V+
Sbjct: 267 CAGWIRLAKELGLEIGDVCTFTLIKPTEMLVRVS 300
Score = 101 (40.6 bits), Expect = 8.0e-10, Sum P(2) = 8.0e-10
Identities = 28/103 (27%), Positives = 54/103 (52%)
Query: 4 PYFHKLILASTIRDKRLR-IPENFVRNF-KDDLSAAATLIVPNGMVSRVGLRRLDNKVWF 61
P F K++ ++ + + +R IP NF+++ +++LSA L V G + + R + +F
Sbjct: 16 PGFFKILRSADLSSEIMRGIPLNFIKSISEEELSAKMLLKVSWGSSWPIKICR-NPSFYF 74
Query: 62 YD--GWQEFMERYFIRIGYFLVFRYEGNSAFNVYIFNLPSSEI 102
+ GW +F+ + FL F ++GN F V I+ + E+
Sbjct: 75 MEKKGWDQFLSDNGLGNDEFLTFTHQGNMCFTVDIYQIDGKEL 117
>TAIR|locus:2086082 [details] [associations]
symbol:REM22 "REPRODUCTIVE MERISTEM 22" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0010093 "specification of floral organ
identity" evidence=RCA] [GO:0048440 "carpel development"
evidence=RCA] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AB026636
HOGENOM:HOG000131629 ProtClustDB:CLSN2681146 EMBL:AB493618
IPI:IPI00527476 RefSeq:NP_188326.1 UniGene:At.38804
ProteinModelPortal:Q9LSP6 DNASU:820957 EnsemblPlants:AT3G17010.1
GeneID:820957 KEGG:ath:AT3G17010 TAIR:At3g17010 eggNOG:NOG255942
InParanoid:Q9LSP6 OMA:REIRTIF PhylomeDB:Q9LSP6
Genevestigator:Q9LSP6 Uniprot:Q9LSP6
Length = 302
Score = 137 (53.3 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 45/176 (25%), Positives = 79/176 (44%)
Query: 167 EAN-LQRLKVKLYSQDGETPKLKKP-GRKRKIDPNVQASSAQEVHDGEMQFR---FYESA 221
E N L+ K + + G + +KK G ID + S + E R +S
Sbjct: 114 EQNGLEMRKPRKFQTMGPSSGIKKEEGENSLIDVKKEEESDESPGRAEFLVRKKKTEDSK 173
Query: 222 SARKRTVTAEERERAINAAKAFEPSNPFCRVVLRPSYLYKGCIMYLPSCFAEKHLNGVCG 281
S++K+ + ++++ + +K P ++ +R SYL + +P F + H+
Sbjct: 174 SSKKKMTRNKVKKKSKSKSKQVLDGVPEFKITIRKSYLK---FLAIPKHFVDDHIPNKSK 230
Query: 282 FIKLQLSDGKQWPVRCLYRGGRAKFSQGWYEFTVENRLGEGDVCVFEVLRAREFVL 337
++ +G W V CL R R FS G+ + E L GD C F++++ EFVL
Sbjct: 231 IFTIRHPNGGSWKVLCLVREIRTIFSGGYSKLAREFPLMVGDKCTFKLIKPFEFVL 286
Score = 59 (25.8 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 21/95 (22%), Positives = 40/95 (42%)
Query: 6 FHKLILASTIRDKRLR-IPENFVRNFKD-DLSAAATLIVPNGMVSRVGLRRLDNKVWFY- 62
F K+ + + +R +P +F+ + D S + G V + + N ++Y
Sbjct: 21 FFKIFQRADLSSDCMRALPYSFISKVSEKDFSYKMVIRAQWGKTWDVEVSK--NPTYYYI 78
Query: 63 --DGWQEFMERYFIRIGYFLVFRYEGNSAFNVYIF 95
GW F+ + F+ F + GN F+V I+
Sbjct: 79 ETRGWDLFVSDNALGQNEFITFTHRGNMVFHVNIY 113
>TAIR|locus:2124824 [details] [associations]
symbol:AT4G31680 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AL161579 EMBL:AL031004 HOGENOM:HOG000154088
HSSP:Q9FX77 EMBL:AJ515262 IPI:IPI00530013 PIR:T05102
RefSeq:NP_194896.2 UniGene:At.31724 ProteinModelPortal:Q8H2D1
SMR:Q8H2D1 PaxDb:Q8H2D1 PRIDE:Q8H2D1 EnsemblPlants:AT4G31680.1
GeneID:829296 KEGG:ath:AT4G31680 TAIR:At4g31680 eggNOG:NOG262844
InParanoid:Q8H2D1 OMA:QHLPVSF PhylomeDB:Q8H2D1
ProtClustDB:CLSN2685879 Genevestigator:Q8H2D1 Uniprot:Q8H2D1
Length = 462
Score = 112 (44.5 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 39/139 (28%), Positives = 68/139 (48%)
Query: 5 YFHKLILASTIRDKRLRIPENFVRNFKDDLSAAATLIVPNGMVSRVGLRRLD-NKVWFYD 63
+F K +L R+ L IP F + T+ + R ++D N++ +
Sbjct: 13 HFFKPLLPGFQRN--LNIPVKFFSEHIEGKHEGETVKLRADASKRTWEVKMDGNRLT--E 68
Query: 64 GWQEFMERYFIRIGYFLVFRYEGNSAFNVYIFNLPSSEINYQPNALSNFEVPNHSKQYHI 123
GW+EF+E + +RI F+VFR+EG+ F+V EI Y P ++S+ E S + I
Sbjct: 69 GWKEFVEAHDLRIRDFVVFRHEGDMVFHVTALGPSCCEIQY-PQSISH-EEGEESGEVEI 126
Query: 124 FA-EMEDDDSEHVDQPTVN 141
E+E++ + DQ + +
Sbjct: 127 SEREVEENLQKEYDQSSAD 145
Score = 88 (36.0 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 35/126 (27%), Positives = 54/126 (42%)
Query: 228 VTAEERERAINAAKAFEPS----NPFCRVVLRPSYLYKGCIMYLPSCFAEKH-LNGVCGF 282
V ERE N K ++ S N F + V + ++ LP FA+++ L+
Sbjct: 124 VEISEREVEENLQKEYDQSSADLNCFSQSVTHSNI--SNDLVTLPRDFAKRNGLDKGMHE 181
Query: 283 IKLQLSDGKQWPVRCLYR-GGRAKFSQGWYEFTVENRLGEGDVCVFEVLRAREFVLKVTV 341
I L +GK W R G+ GW EN+L GD C F++L+ + +
Sbjct: 182 IVLMNEEGKSWESEVRSRMSGQVFIVGGWKSLCSENKLKGGDSCTFKLLQNAKTPVFQLC 241
Query: 342 FRVSES 347
R+ ES
Sbjct: 242 SRIGES 247
Score = 59 (25.8 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 21/71 (29%), Positives = 31/71 (43%)
Query: 266 YLPSCFAEKHLNGVC--GFIKLQLSDGKQWPVRCLY--RGGRAKFS-QGWYEFTVENRLG 320
+LP F + NG+ G I L D +W ++ RGG F W F N +G
Sbjct: 265 HLPVSFTKG--NGLIHPGEIILVDKDRVEWSMKLQVDNRGGMHIFGGNDWKSFCAANEVG 322
Query: 321 EGDVCVFEVLR 331
G+ E++R
Sbjct: 323 AGESLTLELIR 333
>TAIR|locus:2063434 [details] [associations]
symbol:AT2G35310 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC004667 HOGENOM:HOG000131629
ProtClustDB:CLSN2681146 EMBL:BT002032 EMBL:BT020353 EMBL:BT021085
IPI:IPI00525483 PIR:A84767 RefSeq:NP_181074.2 UniGene:At.37682
ProteinModelPortal:Q5PNU4 PRIDE:Q5PNU4 EnsemblPlants:AT2G35310.1
GeneID:818098 KEGG:ath:AT2G35310 TAIR:At2g35310 eggNOG:NOG312915
InParanoid:Q5PNU4 OMA:KARWGSS PhylomeDB:Q5PNU4
Genevestigator:Q5PNU4 Uniprot:Q5PNU4
Length = 288
Score = 98 (39.6 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 30/112 (26%), Positives = 55/112 (49%)
Query: 3 RPYFHKLILASTIRDKRLR-IPENFVRNFKD-DLSAAATLIVPNGMVSRVGLRRLDNKVW 60
R F K++ I + +R +P +FVR+F + +LS + G V + + + + +
Sbjct: 16 RESFFKVLQRVDISSENMRALPYDFVRSFSNNELSRKMKIKARWGSSWEVEICK-NPRFY 74
Query: 61 FYD--GWQEFMERYFIRIGYFLVFRYEGNSAFNVYIFNLPSSEINYQPNALS 110
F + GW++F+ + FL F ++GN F V IF E+ P ++S
Sbjct: 75 FMEKSGWEKFVSDNALGASEFLTFTHKGNMRFTVNIFMQDGKEMLQPPQSMS 126
Score = 94 (38.1 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 45/189 (23%), Positives = 81/189 (42%)
Query: 172 RLKVKLYSQDG----ETPKL------KKPGRKRKIDPNVQASSAQEVHDG-----EMQF- 215
R V ++ QDG + P+ +P ++ + P++ + A E + G ++ F
Sbjct: 105 RFTVNIFMQDGKEMLQPPQSMSFMASSRPPKREQGIPSLATTIAAESNGGGNYKRKLNFE 164
Query: 216 -RFYESASARKRT--VTAEERERAINAAKAFEPSNPFCRVVLRPSYLYKGCIMYLPSCFA 272
+ E + KRT V + +RE A ++ + + F ++ SYL M+ P
Sbjct: 165 KKKAEESHNSKRTDKVFSVQRESAGASSSSVAEFSMF----IKKSYLI---YMWFPKSVQ 217
Query: 273 EKHLNGVCGFIKLQLSDGKQ-WPVRCLYRGGRAKFSQGWYEFTVENRLGEGDVCVFEVLR 331
H+ K+ + K+ W V + G ++ FS GW E L GD C F ++
Sbjct: 218 SIHMPKQRTIFKIHHPNMKKSWNVVYVVSGTKSSFSAGWKGLAQEYPLAVGDTCKFSFIK 277
Query: 332 AREFVLKVT 340
E +L V+
Sbjct: 278 QHELILFVS 286
>TAIR|locus:2144831 [details] [associations]
symbol:AT5G09780 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AB020752 EMBL:AL353994 EMBL:DQ056675
IPI:IPI00528395 PIR:T49920 RefSeq:NP_196540.1 UniGene:At.54791
ProteinModelPortal:Q9LXE1 SMR:Q9LXE1 EnsemblPlants:AT5G09780.1
GeneID:830838 KEGG:ath:AT5G09780 TAIR:At5g09780 eggNOG:NOG289999
HOGENOM:HOG000131629 InParanoid:Q9LXE1 OMA:SKRTERV PhylomeDB:Q9LXE1
ProtClustDB:CLSN2681146 Genevestigator:Q9LXE1 Uniprot:Q9LXE1
Length = 308
Score = 102 (41.0 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 32/111 (28%), Positives = 56/111 (50%)
Query: 6 FHKLILASTIRDKRLR-IPENFVRNFKD-DLSAAATLIVPNGMVSRVGLRRLDNKVWFYD 63
F K++ S + + R IP +FV NF D +LS V G +V + + + + +F +
Sbjct: 19 FFKVLKRSDMSSEDTRAIPYDFVINFSDNELSGDMKFRVQWGNSWKVKISK-NPRFYFME 77
Query: 64 --GWQEFMERYFIRIGYFLVFRYEGNSAFNVYIFNLPSSEINYQPNALSNF 112
GW++F+ + FL F ++G +F V IFN E+ P + ++F
Sbjct: 78 KSGWEKFVIDNALGDHEFLTFTHKGQMSFTVKIFNKDGKEMMQPPQSRASF 128
Score = 86 (35.3 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 38/179 (21%), Positives = 77/179 (43%)
Query: 167 EANLQRLKVKLYSQDGETPKLKKPGRKRKIDPNVQASSAQEVHDGEMQFRFYESASARKR 226
E +++R + L S D + G + N S ++++ G+ + ++ +R
Sbjct: 137 EQDVKREEEVLVSSDS-----RSRGPTTAAETNRGGSYKRKLNFGKKKAEETQTYKRTER 191
Query: 227 TVTAEERERAINAAKAF--EPSNPFC--RVVLRPSYLYKGCIMYLPSCFAEKHLNGVCGF 282
T ++ ER ++ + + EPS+ ++ + SY+ + +P F ++
Sbjct: 192 TQNSKRTERVVSKERVYAGEPSSSVAGFKIFISKSYIKS---LAIPKPFGN-YMPKEKTR 247
Query: 283 IKLQLSDG-KQWPVRCLYRGGRAKFSQGWYEFTVENRLGEGDVCVFEVLRAREFVLKVT 340
+K+ DG K W V + + FS GW E + GD C F ++ E +L V+
Sbjct: 248 VKIHHPDGEKTWKVVFVVKERGQIFSGGWKRLCKEYPVVFGDTCKFTLITPLELLLVVS 306
>TAIR|locus:2052991 [details] [associations]
symbol:AT2G16210 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC007134 HOGENOM:HOG000131629
ProtClustDB:CLSN2681146 EMBL:AY247810 EMBL:AY247811 EMBL:AY924741
IPI:IPI00517726 IPI:IPI00548228 PIR:H84537 RefSeq:NP_179217.2
RefSeq:NP_973471.1 UniGene:At.40304 ProteinModelPortal:Q5BPT7
SMR:Q5BPT7 EnsemblPlants:AT2G16210.1 GeneID:816118
KEGG:ath:AT2G16210 TAIR:At2g16210 eggNOG:NOG329060
InParanoid:Q5BPT7 OMA:VKEYPLA PhylomeDB:Q5BPT7
Genevestigator:Q5BPT7 Uniprot:Q5BPT7
Length = 291
Score = 100 (40.3 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 33/130 (25%), Positives = 60/130 (46%)
Query: 6 FHKLILASTIRDKRLR-IPENFVRNFKD-DLSAAATLIVPNGMVSRVGLRRLDNKVWFYD 63
F K++ + + + R +P +F R+F D +LS + G VG+ + + + +F +
Sbjct: 19 FFKVVQSINVSSENKRALPHDFSRSFTDKELSRKMKIRAQWGNSWEVGISK-NPRFYFME 77
Query: 64 --GWQEFMERYFIRIGYFLVFRYEGNSAFNVYIFNLPSSEINYQPNALSNFEVPNHSKQY 121
GW++F+ + L F ++G F V IF L E+ P + S F + K
Sbjct: 78 KSGWEKFVRDNALGNSELLTFTHKGKMHFTVNIFKLDGKEMMQPPQSRSFFASSSRIK-- 135
Query: 122 HIFAEMEDDD 131
E E++D
Sbjct: 136 ---TEQEEND 142
Score = 86 (35.3 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 30/122 (24%), Positives = 56/122 (45%)
Query: 223 ARKRTVTAEERERAINAAKAFEPSNPFCRVVLRPSYLYK-GCIMYL--PSCFAEKHLNGV 279
A K + +++ E+ + A + ++ + L+K G +++L P+ ++ +
Sbjct: 172 AAKESQSSKRTEKVVRARSDYAGASSSTAAAF--TILFKQGYLVFLRIPNSVSKDQVPDE 229
Query: 280 CGFIKLQLSDGKQ-WPVRCLYRGGRAKFSQGWYEFTVENRLGEGDVCVFEVLRAREFVLK 338
K+ +GK+ W V L R G FS GW E L GD C F ++ +E +L
Sbjct: 230 KTVFKIHHPNGKKSWNVVYLERFGA--FSGGWRRVVKEYPLAVGDTCKFTFIKPKELLLV 287
Query: 339 VT 340
V+
Sbjct: 288 VS 289
>TAIR|locus:2124839 [details] [associations]
symbol:AT4G31690 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677
GO:GO:0009941 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AL161579 EMBL:AL031004 HOGENOM:HOG000154088
HSSP:Q9FX77 eggNOG:NOG262844 ProtClustDB:CLSN2685879 EMBL:AJ441294
IPI:IPI00526797 PIR:T05101 RefSeq:NP_194897.1 UniGene:At.31723
ProteinModelPortal:O81778 SMR:O81778 EnsemblPlants:AT4G31690.1
GeneID:829297 KEGG:ath:AT4G31690 TAIR:At4g31690 InParanoid:O81778
PhylomeDB:O81778 Genevestigator:O81778 Uniprot:O81778
Length = 461
Score = 109 (43.4 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 32/113 (28%), Positives = 55/113 (48%)
Query: 20 LRIPENFVRNFKDDLSAAATLIVPNGMVSRVGLRRLDNKVWFYDGWQEFMERYFIRIGYF 79
L+IP N+ + T+ + R +++ +GW+EF+E + +RIG F
Sbjct: 26 LKIPVNYFSEHIEGKHEGKTVTLRTDASERTWEVKMEGHR-LTEGWKEFVEAHDLRIGDF 84
Query: 80 LVFRYEGNSAFNVYIFNLPSSEINYQPNALSNFEVPNHSKQYHIFAEMEDDDS 132
+VFR+EG+ F+V EI Y P + S E S + I +E E +++
Sbjct: 85 VVFRHEGDMVFHVTALGPSCCEIQY-PQS-SRHEEGEESGENEI-SEKEGEEN 134
Score = 82 (33.9 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 283 IKLQLSDGKQWPVRCL-YRGGRAKFSQGWYEFTVENRLGEGDVCVFEVLR 331
I L +GK W Y G GW F EN+L GD C F++L+
Sbjct: 182 IVLMNEEGKSWESEVKSYMSGAVYLVGGWTTFCTENKLDVGDSCTFKLLQ 231
Score = 52 (23.4 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 21/90 (23%), Positives = 36/90 (40%)
Query: 266 YLPSCFAEKHLNGVC--GFIKLQLSDGKQWPVRCLYRGGRAKFSQG---WYEFTVENRLG 320
+LP F + +NG+ G I L D +W + A + G W F N +G
Sbjct: 246 HLPLSFTK--VNGLINPGKIILVDKDRAEWSMMLKVDSRGAVYIIGGNDWKSFCAANEVG 303
Query: 321 EGDVCVFEVLRAREFVLKVTVFRVSESAGF 350
G+ E+++ + ++T E F
Sbjct: 304 AGESLALELIQGGVLLNQITTCFQMEQPSF 333
>TAIR|locus:2124879 [details] [associations]
symbol:AT4G31640 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AL161579 EMBL:AL031004 HOGENOM:HOG000154088
HSSP:Q9FX77 EMBL:AJ441074 EMBL:AY142531 EMBL:AB493714
IPI:IPI00528633 PIR:T05106 RefSeq:NP_194892.1 UniGene:At.31730
ProteinModelPortal:Q9SB80 SMR:Q9SB80 EnsemblPlants:AT4G31640.1
GeneID:829292 KEGG:ath:AT4G31640 TAIR:At4g31640 eggNOG:NOG265345
InParanoid:Q9SB80 OMA:LQLGDLC PhylomeDB:Q9SB80
Genevestigator:Q9SB80 Uniprot:Q9SB80
Length = 352
Score = 99 (39.9 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 16/45 (35%), Positives = 30/45 (66%)
Query: 63 DGWQEFMERYFIRIGYFLVFRYEGNSAFNVYIFNLPSSEINYQPN 107
+GW+EF+E + +R+G F+VF+++G+ F+V E+ Y P+
Sbjct: 68 EGWKEFVEAHDLRVGDFVVFKHKGDMLFHVTAIGPSCCEVQYAPS 112
Score = 88 (36.0 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 26/80 (32%), Positives = 38/80 (47%)
Query: 267 LPSCFAEKH-LNGVCGFIKLQLSDGKQWPVRCL-YRGGRAKFSQGWYEFTVENRLGEGDV 324
+P FA+++ LN I L +G W Y+ GR + GW N+L GD
Sbjct: 168 IPRDFAKRYGLNIGRHEIVLMDEEGNTWESEVKSYKSGRVFIAGGWTSLCTANKLEVGDS 227
Query: 325 CVFEVLRAREFVLKVTVFRV 344
C F++LR K+ VFR+
Sbjct: 228 CTFKLLRNP----KIPVFRL 243
>TAIR|locus:2124864 [details] [associations]
symbol:AT4G31630 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AL161579 EMBL:AL031004 HOGENOM:HOG000154088
IPI:IPI00516528 PIR:T05107 RefSeq:NP_194891.1 UniGene:At.54567
ProteinModelPortal:Q9SB79 SMR:Q9SB79 EnsemblPlants:AT4G31630.1
GeneID:829291 KEGG:ath:AT4G31630 TAIR:At4g31630 eggNOG:NOG301988
InParanoid:Q9SB79 PhylomeDB:Q9SB79 Genevestigator:Q9SB79
Uniprot:Q9SB79
Length = 512
Score = 101 (40.6 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 39/138 (28%), Positives = 66/138 (47%)
Query: 220 SASARKRTVTAEERERAINAAKAFE--P--SNPFCRVVLRPSYLYKGCIMYLPSCFAEKH 275
S+ ARK+ +E I + E P N L+P Y+++ C +LP+ FA +
Sbjct: 274 SSKARKKRNVSEIEGDEIESENCSETIPLNQNKILTFDLKP-YVFRSCQFFLPASFARE- 331
Query: 276 LNGV--CGFIKLQLSDGKQWPVRCLYRGGRAKF-SQGWYEFTVENRLGE-GDVCVFEVLR 331
NG+ G + + DG +W + GR +F ++G +F V N + GD EV+R
Sbjct: 332 -NGIVEAGEVTVLNKDGIEWKSHLVNIKGRDQFYNRGCQDFFVANGVKNVGDPFTLEVIR 390
Query: 332 AREF-VLKVTVFRVSESA 348
+LK+ +V ++A
Sbjct: 391 GGPSPILKICS-KVKQAA 407
Score = 82 (33.9 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 28/121 (23%), Positives = 54/121 (44%)
Query: 22 IPENFVRNFKDDLSAAATLIVPNGMVSRVGLRRLDNKVWFYDGWQEFMERYFIRIGYFLV 81
IP F+ N + + + + + R +LD F GW++F + +R L
Sbjct: 28 IPTEFIWNHFNGKIQSTNMKLTSDASDRNWDVKLDG-ARFAGGWKDFSVSHSVRDDDLLS 86
Query: 82 FRYEGNSAFNVYIFNLPSSEINYQPNALSNFEVPNHSKQYHIFAEMEDDDSEHVDQPTVN 141
FR++G F+V F S+I ++ S+ + + +F + EDDD D +++
Sbjct: 87 FRHDGGMVFHVSPFGRSFSQIQLISSSTSD----DDDDERTVFDDDEDDDVGDDDDNSIS 142
Query: 142 K 142
+
Sbjct: 143 E 143
>TAIR|locus:2161228 [details] [associations]
symbol:AT5G58280 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 EMBL:AB019228 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 HOGENOM:HOG000239798
IPI:IPI00539522 RefSeq:NP_200636.1 UniGene:At.55612
ProteinModelPortal:Q9FHB2 SMR:Q9FHB2 EnsemblPlants:AT5G58280.1
GeneID:835940 KEGG:ath:AT5G58280 TAIR:At5g58280 eggNOG:NOG254695
InParanoid:Q9FHB2 OMA:AMHHNLE PhylomeDB:Q9FHB2
ProtClustDB:CLSN2916203 Genevestigator:Q9FHB2 Uniprot:Q9FHB2
Length = 273
Score = 132 (51.5 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 39/127 (30%), Positives = 70/127 (55%)
Query: 231 EERERAINAAKAFEPS----NP-FCRVVLRPSYLYKGCIMYLPSCFAEKHLNGVCGFIKL 285
EE+ A AA+ F+ S +P F + ++R S++Y + LPS F + I+L
Sbjct: 104 EEKVGAFKAAEKFQRSLKSPHPYFVKSMVR-SHVYSCFWLGLPSRFCADNFPEETMEIEL 162
Query: 286 QLSDGKQWPVRCLYRGGRAKFSQGWYEFTVENRLGEGDVCVFEVLRAREFVLKVTVFRVS 345
+ +G+ + +Y G RA S GW F ++++L +GD +FE++ ++F K+ VF+ +
Sbjct: 163 EDEEGEVY--EAVYIGRRAGLSGGWKRFALDHKLDDGDALLFELVEPKKF--KIYVFKGN 218
Query: 346 ESAGFMS 352
E+A S
Sbjct: 219 ENANLTS 225
>TAIR|locus:2158108 [details] [associations]
symbol:AT5G66980 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS;IDA]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AB026640 HSSP:Q9FX77 IPI:IPI00522166
RefSeq:NP_201499.1 UniGene:At.55721 ProteinModelPortal:Q9FGD2
SMR:Q9FGD2 EnsemblPlants:AT5G66980.1 GeneID:836832
KEGG:ath:AT5G66980 TAIR:At5g66980 eggNOG:NOG256774
HOGENOM:HOG000155376 InParanoid:Q9FGD2 OMA:KFSHESW PhylomeDB:Q9FGD2
ProtClustDB:CLSN2916529 Genevestigator:Q9FGD2 Uniprot:Q9FGD2
Length = 334
Score = 101 (40.6 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 31/94 (32%), Positives = 43/94 (45%)
Query: 6 FHKLILASTIRDKRLRIPENFVRNFKDDLSAAATLIVPNGMVSRVGLRRLDNK----VWF 61
F K+ L L IP F+ + L A L+ G + V + D + V+F
Sbjct: 10 FFKVFLPE-FGSHELVIPPAFIDMLEKPLPKEAFLVDEIGRLWCVETKTEDTEERFCVFF 68
Query: 62 YDGWQEFMERYFIRIGYFLVFRYEGNSAFNVYIF 95
GWQ F + G FLVF Y+G+S F+V IF
Sbjct: 69 TKGWQSFANDQSLEFGDFLVFSYDGDSRFSVTIF 102
Score = 75 (31.5 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 28/92 (30%), Positives = 45/92 (48%)
Query: 243 FEPSNP-FCRVVLRPSYLYKGCIMYLPSCFAEKHLNGVCGFIKLQLSD--GKQWPVRCLY 299
++P +P F R + R S L K + LP F NG+ ++L D GK+WP++ L
Sbjct: 214 YKPKHPHFVRNITRGS-LQK---LELPLTFLRS--NGIELEEDIELCDESGKKWPLKILN 267
Query: 300 RGGRAKFS-QGWYEFTVENRLGEGDVCVFEVL 330
KFS + W F + + + C+FE +
Sbjct: 268 HDRGFKFSHESWLCFCKSHEMILTNKCLFEFI 299
>TAIR|locus:2200620 [details] [associations]
symbol:AT1G26680 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=IDA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009507 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC006535 EMBL:BT002947 IPI:IPI00537352
PIR:G86393 RefSeq:NP_173990.2 UniGene:At.41208 HSSP:Q9FX77
ProteinModelPortal:Q84WP3 SMR:Q84WP3 PaxDb:Q84WP3 PRIDE:Q84WP3
EnsemblPlants:AT1G26680.1 GeneID:839209 KEGG:ath:AT1G26680
TAIR:At1g26680 eggNOG:NOG307425 HOGENOM:HOG000154090
InParanoid:Q84WP3 OMA:GWTSFCQ PhylomeDB:Q84WP3
ProtClustDB:CLSN2918254 Genevestigator:Q84WP3 Uniprot:Q84WP3
Length = 920
Score = 137 (53.3 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 76/343 (22%), Positives = 141/343 (41%)
Query: 4 PYFHKLILASTIRDKRLRIPENFV-RNFKDDLSAAATLIVPNGMVSRVGLRRLDNKVWFY 62
P+F + IL + L IP F ++ + + T+ + + + L ++D +
Sbjct: 13 PHFFQPILTES--RTHLNIPVAFFSKHVEGRNNQNKTVTLRSDASDKTWLVKMDG-LKLT 69
Query: 63 DGWQEFMERYFIRIGYFLVFRYEGNSAFNVYIFNLPSSEINYQPNALSNFEVPNHSKQYH 122
DGW++F + +R G +VFR EG F+V EI Y ++ N + + Q +
Sbjct: 70 DGWEDFAFAHDLRTGDIVVFRLEGEMVFHVTALGPSCCEIQYHTSS-HNINDDDRNDQIN 128
Query: 123 IFAE----MEDDDSEHVDQPTVNKTFNPPSFQXXXXXXXXXXXXXGAGEANLQRL---KV 175
I + ++ + + V+ + F A L ++ K+
Sbjct: 129 IASRNSSRVKKNPRKKVESSLDHSRFVAKVSAWCLSNDRLYIPLSFARLNGLNKINSKKI 188
Query: 176 KLYSQDGETPKLKKPGRKRKIDPNVQAS-----SAQEVHDGEMQFRFY-ESASARKRTVT 229
L +++G + KL K + VQ+ S + G+ F+ +SA R
Sbjct: 189 YLQNEEGRSWKLVLRHDKSGMQTFVQSGWRRFCSENGIRQGQYTFKLVRKSAPPVIRLCR 248
Query: 230 AEERERAINAAKAFEPSNPFCRVVLRPSYLYKGCIMYLPSCFAEKH-LNGVCGFIKLQLS 288
A+ + + + A+ + F V PS L + ++YLP F + L+ C I L+
Sbjct: 249 AKAKPKQRSVAEYSSDHSCFEGSVT-PSSL-RNDLLYLPRSFVNSNRLDKRCSEIVLKNE 306
Query: 289 DGKQWPVRCLYRGGRAKF-SQGWYEFTVENRLGEGDVCVFEVL 330
G +WP+ L R + +GW F NR+ GD F+++
Sbjct: 307 QGVKWPL-VLKRFKSVTYLPKGWTSFCQVNRIKAGDSFKFKLV 348
>TAIR|locus:2165497 [details] [associations]
symbol:AT5G42700 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] InterPro:IPR003340 Pfam:PF02362
PROSITE:PS50863 SMART:SM01019 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
EMBL:AB007647 HOGENOM:HOG000239798 IPI:IPI00522209
RefSeq:NP_199084.2 UniGene:At.30157 ProteinModelPortal:Q9FMZ4
SMR:Q9FMZ4 EnsemblPlants:AT5G42700.1 GeneID:834279
KEGG:ath:AT5G42700 TAIR:At5g42700 eggNOG:NOG300571
InParanoid:Q9FMZ4 OMA:YETIYLA PhylomeDB:Q9FMZ4
ProtClustDB:CLSN2918338 Genevestigator:Q9FMZ4 Uniprot:Q9FMZ4
Length = 211
Score = 122 (48.0 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 54/192 (28%), Positives = 86/192 (44%)
Query: 170 LQRLKVKLYSQDGETPKLK-KPGRKRKIDPNVQASSAQEVHDGEMQFRFY-ESASARKRT 227
++ L + SQ + +K P +KR I P +V +Q R + R
Sbjct: 24 MEALNLPKLSQILNSTSVKISPMKKRSI-PRTPEKKMVDVKRVHIQRRGVGKKRDLLNRV 82
Query: 228 VTAEE-RERAINAAKAFEPS----NP-FCRVVLRPSYLYKGCIMYLPSCFAEKHLNGVCG 281
+EE R+ AI+ A F+ P F + +L+ S++ G + LP F + HL G
Sbjct: 83 YVSEEIRDEAISRANKFQDELGSGYPSFVKSMLQ-SHVSGGFWLGLPVQFCKSHLGLHDG 141
Query: 282 FIKLQLSDGKQWPVRCLYRGGRAKFSQGWYEFTVENRLGEGDVCVFEVLRAREFVLKVT- 340
I L +G+++ +Y + S GW F V + L GD VFE++R F + +T
Sbjct: 142 VITLIDEEGEEYET--IYLARKNGLSGGWMGFAVAHNLAYGDTLVFELVRRTAFKVYITR 199
Query: 341 VFRVSESAGFMS 352
V ES+ MS
Sbjct: 200 VGSCGESSKDMS 211
>TAIR|locus:2126016 [details] [associations]
symbol:MEE45 "maternal effect embryo arrest 45"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=IMP] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0009793 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AF013293 EMBL:AF195115 EMBL:AL161471
HOGENOM:HOG000154088 IPI:IPI00542107 PIR:T01545 RefSeq:NP_567162.2
UniGene:At.54056 ProteinModelPortal:O23076 SMR:O23076 PaxDb:O23076
PRIDE:O23076 EnsemblPlants:AT4G00260.1 GeneID:828225
KEGG:ath:AT4G00260 TAIR:At4g00260 InParanoid:O23076 OMA:AHITRSS
PhylomeDB:O23076 ProtClustDB:CLSN2680937 Genevestigator:O23076
Uniprot:O23076
Length = 528
Score = 93 (37.8 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 49/176 (27%), Positives = 76/176 (43%)
Query: 177 LYSQDGETPKL-KKPGRK-RKIDPNVQASSAQEVHDGEMQFRFYESASARKRTVTAEERE 234
L + D T KL K+ G ++ PN A EV E E S +R + +R+
Sbjct: 206 LKAGDNYTFKLIKRAGTLVLRLLPNEPKEEANEVSLPE------EPESDAERNLEKIQRK 259
Query: 235 RAI--NAAKAFEPSN--PFCRVV-LRPSYLYKGCIMYLPSCFAEKHLNGV---CGFIKLQ 286
+ N + E S+ P C V + PS L + +YLP F + NGV CG + L
Sbjct: 260 EKVKKNVTREAESSSQDPSCFVANVSPSSL-RYDTLYLPKRFMRE--NGVDKRCGEMILI 316
Query: 287 LSDGKQWPVRCLYR--GGRAKFSQGWYEFTVENRLGEGDVCVFEVLRARE-FVLKV 339
GK W + + G + +GW F N L G + ++++ R VL++
Sbjct: 317 NEKGKSWTLDLKVKKSSGTSLIKRGWRSFCSANGLRAGSIITLKLIKKRATLVLRL 372
Score = 83 (34.3 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 41/143 (28%), Positives = 57/143 (39%)
Query: 218 YESASARKRTVTAEERERAINAAKAFEPSN--PFCRVV-LRPSYLYKGCIMYLPSCFAEK 274
Y S S K + E+++ N E S+ P C V + PS L + +M P F
Sbjct: 101 YGSCSVEKNNLGDEKKKVKENPNGEAESSSRDPSCFVANVAPSSL-RYDLMRFPRGFVRD 159
Query: 275 HLNGVCGF--IKLQLSDGKQWPVRCLYR--GGRAKFSQGWYEFTVENRLGEGDVCVFEVL 330
NGV G I L G+ W + G GW F N L GD F+++
Sbjct: 160 --NGVVGSGEIVLMNEKGRSWNFNLRQKPSNGTVYVRGGWVSFCDANGLKAGDNYTFKLI 217
Query: 331 -RAREFVLKVTVFRVSESAGFMS 352
RA VL++ E A +S
Sbjct: 218 KRAGTLVLRLLPNEPKEEANEVS 240
Score = 81 (33.6 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 63 DGWQEFMERYFIRIGYFLVFRYEGNSAFNVYIFNLPSSEINY 104
DGW+EF + +RIG +VFR E + AF+V + I Y
Sbjct: 60 DGWKEFAVSHDLRIGDIVVFRQESDLAFHVTLLGPSCCGIQY 101
>TAIR|locus:2083921 [details] [associations]
symbol:AT3G53310 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 EMBL:AL132966 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 HSSP:Q9FX77 EMBL:BT025724
EMBL:AB493647 EMBL:AY087586 IPI:IPI00519323 PIR:T45871
RefSeq:NP_566984.1 UniGene:At.47486 ProteinModelPortal:Q8LAV5
SMR:Q8LAV5 PRIDE:Q8LAV5 EnsemblPlants:AT3G53310.1 GeneID:824499
KEGG:ath:AT3G53310 TAIR:At3g53310 eggNOG:NOG240874
HOGENOM:HOG000097078 InParanoid:Q8LAV5 OMA:VECELLH PhylomeDB:Q8LAV5
ProtClustDB:CLSN2689141 Genevestigator:Q8LAV5 Uniprot:Q8LAV5
Length = 286
Score = 123 (48.4 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 37/138 (26%), Positives = 64/138 (46%)
Query: 4 PYFHKLILASTIRDKRLRIPENFVRNFKDDLSAAATLIVPNGMVSRVGLRRLDNKVWFYD 63
P F K+ L + + L IP F+ D L L G + V L+++ +
Sbjct: 9 PRFFKVFLVESASES-LMIPLPFMAFLADPLPKTVKLQGLGGKLWTVSLKKISGAAYLTR 67
Query: 64 GWQEFMERYFIRIGYFLVFRYEGNSAFNVYIFNL-PSSEINYQPNA--LSNFEVPNHSKQ 120
GW +F E + ++ G F+ F Y+G+ F V +F+ S E+ + A LS+ + + +
Sbjct: 68 GWPKFAEEHELKNGEFMTFVYDGHRTFEVSVFDRWGSKEVRAEIQAIPLSDSDSDSVVED 127
Query: 121 YHIFAEM-EDDDSEHVDQ 137
++ EDDD E D+
Sbjct: 128 EKDSTDVVEDDDDEDEDE 145
>TAIR|locus:2124889 [details] [associations]
symbol:AT4G31650 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AL161579 EMBL:AL031004 HOGENOM:HOG000154088
eggNOG:NOG265345 IPI:IPI00516460 PIR:T05105 RefSeq:NP_194893.1
UniGene:At.54568 ProteinModelPortal:O81782 SMR:O81782 PRIDE:O81782
EnsemblPlants:AT4G31650.1 GeneID:829293 KEGG:ath:AT4G31650
TAIR:At4g31650 InParanoid:O81782 OMA:KSHINIP PhylomeDB:O81782
Genevestigator:O81782 Uniprot:O81782
Length = 493
Score = 85 (35.0 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 21/89 (23%), Positives = 43/89 (48%)
Query: 4 PYFHKLILASTIRDKRLRIPENFVRNFKDDLSAAATLIVPNGMVSRVGLRRLDNKVWFYD 63
P+F + +L + IP F + T+ + + R +++ D
Sbjct: 12 PHFFQPLLPGF--KSHINIPVKFFSKYIKGKHEGKTVKLRSDSSKRTWKVKIEGHT-LTD 68
Query: 64 GWQEFMERYFIRIGYFLVFRYEGNSAFNV 92
GW+EF+E + +RI F++F+++G+ F+V
Sbjct: 69 GWKEFVEAHDLRISDFVIFKHKGDMFFDV 97
Score = 84 (34.6 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 24/80 (30%), Positives = 39/80 (48%)
Query: 267 LPSCFAEKH-LNGVCGFIKLQLSDGKQWPVRCL-YRGGRAKFSQGWYEFTVENRLGEGDV 324
+P FA+++ N I L +GK W + Y+ G+ + GW E++L GD
Sbjct: 148 VPRDFAKRYGFNIGRHEIVLMNEEGKPWESEVISYKSGKVIVAGGWKSLCTESKLEVGDS 207
Query: 325 CVFEVLRAREFVLKVTVFRV 344
C F++L K+ VFR+
Sbjct: 208 CTFKLLHNA----KMPVFRL 223
>TAIR|locus:2047241 [details] [associations]
symbol:AT2G24700 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC007266 EMBL:BX819051 IPI:IPI00529810
PIR:H84639 RefSeq:NP_180046.2 UniGene:At.50095
ProteinModelPortal:P0DH85 SMR:P0DH85 PRIDE:P0DH85 GeneID:817006
KEGG:ath:AT2G24700 TAIR:At2g24700 HOGENOM:HOG000154088 OMA:RSDASEM
PhylomeDB:P0DH85 Uniprot:P0DH85
Length = 555
Score = 85 (35.0 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 33/121 (27%), Positives = 55/121 (45%)
Query: 219 ESASARKRTVTAEERERAINAAKAFEPSNPFCRVVLRPSYLYKGCIMYLPSCFAEKHLNG 278
E+ S++K+++ +RE A A + S C V K +Y+P FA NG
Sbjct: 126 ENVSSKKKSL---KRE----AESAPDNSLDSCFVATVTGSNLKRDTLYIPKEFALS--NG 176
Query: 279 VCGFIKLQL--SDGKQWPV---RCLYRGGRAKFSQGWYEFTVENRLGEGDVCVFEVLRAR 333
+ ++ L +G+ W + R Y GR +GW F + N GDV F++++
Sbjct: 177 LMNKYQIVLMNEEGESWKIDLRREAYNYGRFYMRRGWRSFCIANGKKPGDVFAFKLVKNE 236
Query: 334 E 334
E
Sbjct: 237 E 237
Score = 80 (33.2 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 63 DGWQEFMERYFIRIGYFLVFRYEGNSAFNVYIFNLPSSEINYQPNALSNFEV 114
+GW++F + +R+G +VFR EG F+V EI Y + L ++
Sbjct: 68 NGWEDFTIAHDLRVGDIVVFRQEGELVFHVTALGPSCCEIQYGEDTLEEDKI 119
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.138 0.421 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 354 341 0.00095 116 3 11 22 0.50 33
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 24
No. of states in DFA: 603 (64 KB)
Total size of DFA: 241 KB (2131 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 29.47u 0.09s 29.56t Elapsed: 00:00:02
Total cpu time: 29.47u 0.09s 29.56t Elapsed: 00:00:02
Start: Mon May 20 17:45:29 2013 End: Mon May 20 17:45:31 2013