Query 018535
Match_columns 354
No_of_seqs 213 out of 1359
Neff 7.6
Searched_HMMs 46136
Date Fri Mar 29 09:49:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018535.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018535hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd06429 GT8_like_1 GT8_like_1 100.0 9.1E-50 2E-54 370.8 21.5 236 66-339 1-256 (257)
2 PRK15171 lipopolysaccharide 1, 100.0 6.1E-50 1.3E-54 385.9 20.4 265 64-345 24-292 (334)
3 PLN02718 Probable galacturonos 100.0 6.8E-48 1.5E-52 384.0 19.9 283 48-345 301-595 (603)
4 PLN02523 galacturonosyltransfe 100.0 9.4E-47 2E-51 371.7 22.4 283 48-345 236-551 (559)
5 PLN02742 Probable galacturonos 100.0 3.1E-46 6.8E-51 367.7 21.9 285 46-345 213-527 (534)
6 PLN02829 Probable galacturonos 100.0 7E-46 1.5E-50 368.7 19.1 282 49-345 320-631 (639)
7 cd06431 GT8_LARGE_C LARGE cata 100.0 4.7E-45 1E-49 343.5 19.4 259 66-342 3-271 (280)
8 PLN02910 polygalacturonate 4-a 100.0 1.1E-44 2.3E-49 359.7 19.2 283 48-345 333-649 (657)
9 cd00505 Glyco_transf_8 Members 100.0 5.2E-44 1.1E-48 331.6 21.8 240 66-322 1-246 (246)
10 cd04194 GT8_A4GalT_like A4GalT 100.0 1.8E-44 3.8E-49 334.8 18.3 240 66-321 1-247 (248)
11 COG1442 RfaJ Lipopolysaccharid 100.0 8.3E-44 1.8E-48 338.3 19.2 264 65-346 2-268 (325)
12 PLN02870 Probable galacturonos 100.0 3.9E-44 8.4E-49 352.2 17.2 275 52-345 198-524 (533)
13 PLN02769 Probable galacturonos 100.0 1.2E-43 2.5E-48 355.1 20.2 276 48-345 318-622 (629)
14 PLN02659 Probable galacturonos 100.0 3.8E-43 8.2E-48 345.3 17.8 278 52-345 199-525 (534)
15 PLN02867 Probable galacturonos 100.0 4.3E-43 9.4E-48 346.2 17.1 277 51-345 202-527 (535)
16 PF01501 Glyco_transf_8: Glyco 100.0 4.4E-41 9.5E-46 309.2 12.9 247 67-323 1-249 (250)
17 cd06430 GT8_like_2 GT8_like_2 100.0 4.7E-38 1E-42 295.7 21.4 254 66-342 1-276 (304)
18 cd06432 GT8_HUGT1_C_like The C 100.0 6.5E-38 1.4E-42 290.6 19.0 231 66-315 1-239 (248)
19 PLN00176 galactinol synthase 100.0 7.3E-32 1.6E-36 257.4 20.2 237 66-324 25-270 (333)
20 cd02537 GT8_Glycogenin Glycoge 100.0 3.8E-31 8.2E-36 244.6 16.6 211 69-326 5-218 (240)
21 cd06914 GT8_GNT1 GNT1 is a fun 99.9 1E-24 2.2E-29 203.9 16.2 212 69-324 5-242 (278)
22 KOG1879 UDP-glucose:glycoprote 99.6 4.6E-15 1E-19 156.8 11.5 257 64-341 1180-1445(1470)
23 COG5597 Alpha-N-acetylglucosam 98.9 2.9E-10 6.2E-15 105.4 -0.4 168 149-341 155-357 (368)
24 PF03407 Nucleotid_trans: Nucl 97.4 0.00079 1.7E-08 60.7 9.1 139 150-315 52-201 (212)
25 PF11051 Mannosyl_trans3: Mann 97.4 0.00073 1.6E-08 63.7 8.5 110 68-187 4-114 (271)
26 PLN03182 xyloglucan 6-xylosylt 96.1 0.019 4.2E-07 56.3 7.6 140 160-323 195-365 (429)
27 PF05637 Glyco_transf_34: gala 95.7 0.0066 1.4E-07 56.2 2.4 151 150-315 60-231 (239)
28 cd02515 Glyco_transf_6 Glycosy 94.4 3.3 7.2E-05 38.8 16.1 198 64-290 34-247 (271)
29 PLN03181 glycosyltransferase; 93.2 0.14 3.1E-06 50.4 5.2 106 160-292 196-328 (453)
30 KOG1950 Glycosyl transferase, 92.1 0.19 4.1E-06 49.5 4.5 92 226-324 197-290 (369)
31 PF03414 Glyco_transf_6: Glyco 90.8 12 0.00025 36.4 14.9 204 64-289 99-311 (337)
32 PF00535 Glycos_transf_2: Glyc 87.2 5.9 0.00013 32.4 9.3 92 77-187 10-103 (169)
33 cd06434 GT2_HAS Hyaluronan syn 84.7 13 0.00028 33.0 10.9 99 66-186 2-101 (235)
34 cd04186 GT_2_like_c Subfamily 82.0 22 0.00049 29.1 10.7 89 77-186 9-98 (166)
35 cd06439 CESA_like_1 CESA_like_ 81.8 35 0.00076 30.6 12.6 104 64-186 29-133 (251)
36 cd06421 CESA_CelA_like CESA_Ce 80.3 36 0.00077 30.0 12.0 104 66-185 3-107 (234)
37 cd06423 CESA_like CESA_like is 76.6 26 0.00057 28.4 9.4 90 78-186 10-102 (180)
38 cd02514 GT13_GLCNAC-TI GT13_GL 76.5 22 0.00048 34.6 9.9 114 66-184 2-118 (334)
39 PF04765 DUF616: Protein of un 75.1 7.9 0.00017 37.1 6.2 48 150-198 140-189 (305)
40 KOG1928 Alpha-1,4-N-acetylgluc 74.9 1.5 3.2E-05 43.0 1.3 18 168-185 242-259 (409)
41 cd00761 Glyco_tranf_GTA_type G 73.9 41 0.00089 26.4 9.7 88 77-183 9-97 (156)
42 TIGR03111 glyc2_xrt_Gpos1 puta 73.4 64 0.0014 32.4 12.7 103 64-186 49-155 (439)
43 PF07801 DUF1647: Protein of u 72.3 24 0.00053 29.9 7.9 65 64-133 60-124 (142)
44 cd04192 GT_2_like_e Subfamily 69.4 31 0.00067 30.1 8.6 95 76-185 8-105 (229)
45 PF03071 GNT-I: GNT-I family; 69.4 42 0.00092 33.9 10.1 117 64-185 93-213 (434)
46 PRK05454 glucosyltransferase M 67.6 44 0.00094 35.9 10.4 119 64-197 124-255 (691)
47 cd04190 Chitin_synth_C C-termi 67.2 13 0.00028 33.9 5.8 24 163-186 73-97 (244)
48 PF04488 Gly_transf_sug: Glyco 66.8 3 6.6E-05 32.9 1.3 31 149-184 66-97 (103)
49 cd06427 CESA_like_2 CESA_like_ 66.6 64 0.0014 28.9 10.2 104 66-185 3-107 (241)
50 cd02510 pp-GalNAc-T pp-GalNAc- 65.6 47 0.001 31.0 9.4 91 77-186 11-107 (299)
51 cd04196 GT_2_like_d Subfamily 62.1 95 0.0021 26.6 10.2 89 78-186 11-103 (214)
52 cd04191 Glucan_BSP_ModH Glucan 62.0 1.1E+02 0.0023 28.4 10.8 35 163-197 95-130 (254)
53 cd02520 Glucosylceramide_synth 57.1 1.3E+02 0.0028 26.0 10.2 104 66-186 3-110 (196)
54 cd02525 Succinoglycan_BP_ExoA 56.9 1.1E+02 0.0025 26.9 10.0 102 66-186 2-105 (249)
55 PTZ00260 dolichyl-phosphate be 53.1 2.2E+02 0.0047 27.4 12.4 23 164-186 163-186 (333)
56 cd04185 GT_2_like_b Subfamily 52.6 1E+02 0.0023 26.4 8.8 99 69-185 3-102 (202)
57 PRK15383 type III secretion sy 52.6 8.7 0.00019 35.5 1.7 23 165-187 220-242 (335)
58 PRK15384 type III secretion sy 52.6 8.2 0.00018 35.6 1.6 23 165-187 217-239 (336)
59 PRK15382 non-LEE encoded effec 52.1 8.9 0.00019 35.4 1.7 23 165-187 212-234 (326)
60 PRK14583 hmsR N-glycosyltransf 52.0 2.1E+02 0.0045 28.7 11.9 100 64-185 75-178 (444)
61 cd04179 DPM_DPG-synthase_like 51.8 1.4E+02 0.0031 24.9 9.6 90 78-186 10-103 (185)
62 cd06420 GT2_Chondriotin_Pol_N 51.7 1.4E+02 0.0031 24.9 10.3 93 77-186 9-103 (182)
63 PRK11204 N-glycosyltransferase 51.6 1.4E+02 0.003 29.4 10.4 101 64-186 54-158 (420)
64 cd04184 GT2_RfbC_Mx_like Myxoc 51.3 98 0.0021 26.4 8.3 99 66-185 3-106 (202)
65 PF03314 DUF273: Protein of un 50.5 12 0.00027 33.8 2.4 23 156-179 35-57 (222)
66 TIGR03472 HpnI hopanoid biosyn 50.3 1.6E+02 0.0035 28.6 10.5 100 64-180 41-143 (373)
67 PRK10063 putative glycosyl tra 49.3 1.8E+02 0.0039 26.6 10.2 99 66-183 3-102 (248)
68 CHL00031 psbT photosystem II p 48.0 28 0.0006 21.8 2.9 16 3-18 4-19 (33)
69 cd06913 beta3GnTL1_like Beta 1 47.9 1.8E+02 0.004 25.3 9.7 96 77-186 9-108 (219)
70 PLN02726 dolichyl-phosphate be 47.2 2E+02 0.0043 25.8 10.0 105 64-186 9-117 (243)
71 PF10111 Glyco_tranf_2_2: Glyc 45.3 2.2E+02 0.0047 26.5 10.2 93 78-185 17-111 (281)
72 PRK11498 bcsA cellulose syntha 40.3 1.8E+02 0.0039 32.2 9.7 114 64-197 260-374 (852)
73 cd06435 CESA_NdvC_like NdvC_li 40.0 2.4E+02 0.0052 24.7 9.3 23 163-185 84-107 (236)
74 PF07172 GRP: Glycine rich pro 37.8 23 0.0005 27.9 1.8 23 1-24 1-24 (95)
75 cd06438 EpsO_like EpsO protein 37.8 2.3E+02 0.005 23.9 8.5 92 78-186 10-105 (183)
76 cd04195 GT2_AmsE_like GT2_AmsE 37.2 2.6E+02 0.0056 23.7 9.5 90 77-185 12-103 (201)
77 cd06433 GT_2_WfgS_like WfgS an 36.6 2.4E+02 0.0052 23.5 8.4 87 77-184 10-97 (202)
78 TIGR03469 HonB hopene-associat 33.8 4.6E+02 0.01 25.6 11.6 112 64-185 40-156 (384)
79 PRK11875 psbT photosystem II r 33.2 51 0.0011 20.3 2.4 16 3-18 4-19 (31)
80 PRK10018 putative glycosyl tra 31.6 4.4E+02 0.0095 24.7 11.4 102 64-186 5-109 (279)
81 cd06442 DPM1_like DPM1_like re 30.5 3.5E+02 0.0077 23.3 10.1 89 78-186 10-102 (224)
82 PF13641 Glyco_tranf_2_3: Glyc 28.8 1.2E+02 0.0027 26.5 5.4 104 66-186 3-110 (228)
83 cd06422 NTP_transferase_like_1 28.0 1.7E+02 0.0037 25.8 6.2 23 165-187 98-120 (221)
84 KOG4748 Subunit of Golgi manno 27.0 74 0.0016 31.3 3.7 161 160-341 173-349 (364)
85 PF11735 CAP59_mtransfer: Cryp 24.3 4.2E+02 0.0091 24.5 8.0 32 163-195 112-144 (241)
86 PF03452 Anp1: Anp1; InterPro 23.0 6.4E+02 0.014 23.8 9.1 41 64-107 25-67 (269)
87 KOG3737 Predicted polypeptide 22.4 2.7E+02 0.0059 27.9 6.5 94 66-179 157-256 (603)
88 cd06437 CESA_CaSu_A2 Cellulose 21.9 5.4E+02 0.012 22.5 11.1 38 66-104 3-40 (232)
89 TIGR03030 CelA cellulose synth 21.9 7.2E+02 0.016 26.8 10.4 35 163-197 228-263 (713)
90 PF11397 GlcNAc: Glycosyltrans 21.6 5.3E+02 0.012 25.2 8.6 34 149-183 103-136 (343)
91 PRK10073 putative glycosyl tra 21.0 5.6E+02 0.012 24.5 8.7 100 64-186 6-109 (328)
92 COG0463 WcaA Glycosyltransfera 20.2 4.6E+02 0.0099 21.0 9.0 41 65-108 4-44 (291)
No 1
>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=100.00 E-value=9.1e-50 Score=370.77 Aligned_cols=236 Identities=32% Similarity=0.575 Sum_probs=191.4
Q ss_pred eEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHHhhC--CcceEEEEEecccccccccchh---
Q 018535 66 IHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTF--PYLNLKVYKFDSNRVRGKISKS--- 140 (354)
Q Consensus 66 i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~~~~--~~~~i~~~~~~~~~~~~~is~~--- 140 (354)
+|||+++| ||+ ++++++.|++.|++++.+++|||++++.+.+..+.+.+.. .+.+++++.++...+.+.....
T Consensus 1 ~hiv~~~D-n~l-~~~v~i~S~l~nn~~~~~~~fhvvtd~~s~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~ 78 (257)
T cd06429 1 IHVVIFSD-NRL-AAAVVINSSISNNKDPSNLVFHIVTDNQNYGAMRSWFDLNPLKIATVKVLNFDDFKLLGKVKVDSLM 78 (257)
T ss_pred CCEEEEec-chh-HHHHHHHHHHHhCCCCCceEEEEecCccCHHHHHHHHHhcCCCCceEEEEEeCcHHhhcccccchhh
Confidence 69999999 999 5778888999998877899999999999875444443332 3678999999765443332110
Q ss_pred -------------HHhhccCchhhHHHhhhhhcccccCeEEEEecceEEeccHHHHHhcCCCCCeEEeecccccCccccc
Q 018535 141 -------------IRQALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDDIGKLWDVDLEGRVLAAPEYCHANFTNFF 207 (354)
Q Consensus 141 -------------~~~~~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~Dl~eL~~~dl~g~~iAAv~d~~~~~~~~~ 207 (354)
.+..+.++.+|+||++|+++| +++||||||+|+||++||++||++|++|+++||++|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~s~~~y~Rl~ip~llp-~~~kvlYLD~Dviv~~dl~eL~~~dl~~~~~aav~d--------- 148 (257)
T cd06429 79 QLESEADTSNLKQRKPEYISLLNFARFYLPELFP-KLEKVIYLDDDVVVQKDLTELWNTDLGGGVAGAVET--------- 148 (257)
T ss_pred hhhccccccccccCCccccCHHHHHHHHHHHHhh-hhCeEEEEeCCEEEeCCHHHHhhCCCCCCEEEEEhh---------
Confidence 134567889999999999999 699999999999999999999999999999999852
Q ss_pred ccccccchhhhcccCCCCCcceeeeeEEEecHHHHhcChHHHHHHHHHHhccc--cccCCCCccHHHHHhccceeecCcc
Q 018535 208 TDLFWSDRNLAKTFDGRDPCYFNTGVMVMNVEKWRQGGYSQRVEEWMVVQKQK--RIYHLGSLPPFLLVLAGNIKGVDHR 285 (354)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~yFNSGVmLinl~k~R~~~i~~~~~~~~~~~~~~--~~~~~~DQd~LN~vf~~~i~~Lp~~ 285 (354)
||||||||+|+++||++++++++++|++..... ..+.++|||+||.+|.|+++.||++
T Consensus 149 --------------------yfNsGV~linl~~wr~~~i~~~~~~~~~~~~~~~~~~~~~~dqd~ln~~~~~~~~~L~~~ 208 (257)
T cd06429 149 --------------------SWNPGVNVVNLTEWRRQNVTETYEKWMELNQEEEVTLWKLITLPPGLIVFYGLTSPLDPS 208 (257)
T ss_pred --------------------hcccceEEEeHHHHHhccHHHHHHHHHHHhhhcccchhhcCCccHHHHHccCeeEECChH
Confidence 899999999999999999999999999865432 4467789999999999999999999
Q ss_pred cccccCCCCccccccccCCCCCCEEEEcCCCCCCCCCCCCCCCccccccccccc
Q 018535 286 WNQHGLGGDNIEGKCRNLHPGPISLLHWSGKGKPWLRLDSRKPCTVDHLWAPYD 339 (354)
Q Consensus 286 wN~~~~~~~~~~~~~~~~~~~~~~IIHf~g~~KPW~~~~~~~~~~~~~lW~~y~ 339 (354)
||+++++.+.... .. ...+++||||+|+.|||+.... .+++++|++|.
T Consensus 209 wN~~~l~~~~~~~--~~-~~~~~~IIHy~G~~KPW~~~~~---~~~~~~w~~yl 256 (257)
T cd06429 209 WHVRGLGYNYGIR--PQ-DIKAAAVLHFNGNMKPWLRTAI---PSYKELWEKYL 256 (257)
T ss_pred HcccCCccccccc--cc-ccCCcEEEEECCCCCCcCCCCC---ChHHHHHHHHh
Confidence 9998766542211 11 1246799999999999998643 35899999985
No 2
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=100.00 E-value=6.1e-50 Score=385.89 Aligned_cols=265 Identities=21% Similarity=0.339 Sum_probs=198.6
Q ss_pred CceEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHH---hhCCcceEEEEEecccccccccchh
Q 018535 64 QTIHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSIN---STFPYLNLKVYKFDSNRVRGKISKS 140 (354)
Q Consensus 64 ~~i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~---~~~~~~~i~~~~~~~~~~~~~is~~ 140 (354)
+.||||+|+|++|+++++|+|.||++|+++ ..++|||++++++++.++.|+ +.+ +.+++++.+|.+.+.+..+
T Consensus 24 ~~i~Iv~~~D~ny~~~~~vsi~Sil~nn~~-~~~~f~Il~~~is~e~~~~l~~l~~~~-~~~i~~~~id~~~~~~~~~-- 99 (334)
T PRK15171 24 NSLDIAYGIDKNFLFGCGVSIASVLLNNPD-KSLVFHVFTDYISDADKQRFSALAKQY-NTRINIYLINCERLKSLPS-- 99 (334)
T ss_pred CceeEEEECcHhhHHHHHHHHHHHHHhCCC-CCEEEEEEeCCCCHHHHHHHHHHHHhc-CCeEEEEEeCHHHHhCCcc--
Confidence 679999999999999999999999999864 579999999999986555443 334 3478899998766654332
Q ss_pred HHhhccCchhhHHHhhhhhcccccCeEEEEecceEEeccHHHHHhcCCCCCeEEee-cccccCcccccccccccchhhhc
Q 018535 141 IRQALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDDIGKLWDVDLEGRVLAAP-EYCHANFTNFFTDLFWSDRNLAK 219 (354)
Q Consensus 141 ~~~~~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~Dl~eL~~~dl~g~~iAAv-~d~~~~~~~~~~~~~~~~~~~~~ 219 (354)
..+++..+|+||++|++||++++||||||+|+||++||++||++|+++..+||+ .+... . +|.......
T Consensus 100 --~~~~s~atY~Rl~ip~llp~~~dkvLYLD~Diiv~~dl~~L~~~dl~~~~~aav~~d~~~---~-----~~~~~~~~l 169 (334)
T PRK15171 100 --TKNWTYATYFRFIIADYFIDKTDKVLYLDADIACKGSIKELIDLDFAENEIAAVVAEGDA---E-----WWSKRAQSL 169 (334)
T ss_pred --cCcCCHHHHHHHHHHHhhhhhcCEEEEeeCCEEecCCHHHHHhccCCCCeEEEEEeccch---h-----HHHHHHHhc
Confidence 235677899999999999978999999999999999999999999996655554 44321 1 122211111
Q ss_pred ccCCCCCcceeeeeEEEecHHHHhcChHHHHHHHHHHhccccccCCCCccHHHHHhccceeecCcccccccCCCCccccc
Q 018535 220 TFDGRDPCYFNTGVMVMNVEKWRQGGYSQRVEEWMVVQKQKRIYHLGSLPPFLLVLAGNIKGVDHRWNQHGLGGDNIEGK 299 (354)
Q Consensus 220 ~~~~~~~~yFNSGVmLinl~k~R~~~i~~~~~~~~~~~~~~~~~~~~DQd~LN~vf~~~i~~Lp~~wN~~~~~~~~~~~~ 299 (354)
...+....||||||||||+++||++++++++++++........+.++|||+||.+|.|+++.||++||++..........
T Consensus 170 ~~~~~~~~YFNsGVlliNl~~wRe~~i~~k~~~~l~~~~~~~~~~~~DQDiLN~~~~~~~~~L~~~wN~~~~~~~~~~~~ 249 (334)
T PRK15171 170 QTPGLASGYFNSGFLLINIPAWAQENISAKAIEMLADPEIVSRITHLDQDVLNILLAGKVKFIDAKYNTQFSLNYELKDS 249 (334)
T ss_pred CCccccccceecceEEEcHHHHHHhhHHHHHHHHHhccccccceeecChhHHHHHHcCCeEECCHhhCCccchhHHHHhc
Confidence 11121346999999999999999999999999999743212234578999999999999999999999874211111111
Q ss_pred cccCCCCCCEEEEcCCCCCCCCCCCCCCCcccccccccccccCCCC
Q 018535 300 CRNLHPGPISLLHWSGKGKPWLRLDSRKPCTVDHLWAPYDLYRPPP 345 (354)
Q Consensus 300 ~~~~~~~~~~IIHf~g~~KPW~~~~~~~~~~~~~lW~~y~~~~~~~ 345 (354)
+......+++||||+|+.|||+... . +++.++|+.|...+|=.
T Consensus 250 ~~~~~~~~p~IIHy~G~~KPW~~~~-~--~~~~~~f~~~~~~spw~ 292 (334)
T PRK15171 250 VINPVNDETVFIHYIGPTKPWHSWA-D--YPVSQYFLKAKEASPWK 292 (334)
T ss_pred ccccccCCCEEEEECCCCCCCCCCC-C--CchHHHHHHHHhcCCCC
Confidence 1111124679999999999998743 3 35789999999988754
No 3
>PLN02718 Probable galacturonosyltransferase
Probab=100.00 E-value=6.8e-48 Score=383.97 Aligned_cols=283 Identities=24% Similarity=0.441 Sum_probs=215.7
Q ss_pred CCcCCCCCcCCCCCCCCceEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHHhhC-C-cceEEE
Q 018535 48 FFHEAPAFRNGDSCNTQTIHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTF-P-YLNLKV 125 (354)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~~~~-~-~~~i~~ 125 (354)
.|+.++.+.++ +.+||++++|. | .+++|+|.|++.|+..++.+.|||++++++.+..+.+...- + +..+++
T Consensus 301 ~~~~~~~l~d~-----~~~Hia~~sDN-v-laasVvInSil~Ns~np~~ivFHVvTD~is~~~mk~wf~l~~~~~a~I~V 373 (603)
T PLN02718 301 QLPNQQRYNDP-----DLYHYVVFSDN-V-LACSVVVNSTISSSKEPEKIVFHVVTDSLNYPAISMWFLLNPPGKATIQI 373 (603)
T ss_pred cCCChhhccCC-----cceeEEEEcCC-c-eeEEEEhhhhhhccCCCCcEEEEEEeCCCCHHHHHHHHHhCCCCCcEEEE
Confidence 35556667777 88999999996 6 48999999999997666789999999999876444443322 2 467888
Q ss_pred EEeccc-ccccccch------hHHhhccCchhhHHHhhhhhcccccCeEEEEecceEEeccHHHHHhcCCCCCeEEeecc
Q 018535 126 YKFDSN-RVRGKISK------SIRQALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDDIGKLWDVDLEGRVLAAPEY 198 (354)
Q Consensus 126 ~~~~~~-~~~~~is~------~~~~~~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~Dl~eL~~~dl~g~~iAAv~d 198 (354)
+.++.. .+...... ..+..+.++.+|+||+||++|| +++||||||+|+||++||++||++|++|+++|||+|
T Consensus 374 ~~Iddf~~lp~~~~~~lk~l~s~~~~~~S~~~y~Rl~ipellp-~l~KvLYLD~DvVV~~DL~eL~~iDl~~~v~aaVed 452 (603)
T PLN02718 374 LNIDDMNVLPADYNSLLMKQNSHDPRYISALNHARFYLPDIFP-GLNKIVLFDHDVVVQRDLSRLWSLDMKGKVVGAVET 452 (603)
T ss_pred EecchhccccccchhhhhhccccccccccHHHHHHHHHHHHhc-ccCEEEEEECCEEecCCHHHHhcCCCCCcEEEEecc
Confidence 887631 11111000 1123467889999999999999 699999999999999999999999999999999999
Q ss_pred cccCcccccc---cccccchhhhcccCCCCCcceeeeeEEEecHHHHhcChHHHHHHHHHHhccccccCCCCccHHHHHh
Q 018535 199 CHANFTNFFT---DLFWSDRNLAKTFDGRDPCYFNTGVMVMNVEKWRQGGYSQRVEEWMVVQKQKRIYHLGSLPPFLLVL 275 (354)
Q Consensus 199 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~yFNSGVmLinl~k~R~~~i~~~~~~~~~~~~~~~~~~~~DQd~LN~vf 275 (354)
|...+..+.. ...++++...+.+ ..+.||||+|||||||++||++++++++.+|++.+.+..+|+.++++++|++|
T Consensus 453 C~~~~~~~~~~~~~lnfs~p~i~~~f-n~~~CyfNsGVlLIDLk~WReenITe~~~~~l~~n~~~~l~dqdaLpp~LlvF 531 (603)
T PLN02718 453 CLEGEPSFRSMDTFINFSDPWVAKKF-DPKACTWAFGMNLFDLEEWRRQKLTSVYHKYLQLGVKRPLWKAGSLPIGWLTF 531 (603)
T ss_pred ccccccchhhhhhhhhccchhhhccc-CCCccccccceEEEeHHHHHhcChHHHHHHHHHhccCccccCcccccHHHHHh
Confidence 9653211111 0112333222333 24689999999999999999999999999999876555667777777788999
Q ss_pred ccceeecCcccccccCCCCccccccccCCCCCCEEEEcCCCCCCCCCCCCCCCcccccccccccccCCCC
Q 018535 276 AGNIKGVDHRWNQHGLGGDNIEGKCRNLHPGPISLLHWSGKGKPWLRLDSRKPCTVDHLWAPYDLYRPPP 345 (354)
Q Consensus 276 ~~~i~~Lp~~wN~~~~~~~~~~~~~~~~~~~~~~IIHf~g~~KPW~~~~~~~~~~~~~lW~~y~~~~~~~ 345 (354)
+|+++.||++||+.++|++.....+ ..+++.||||+|+.|||...+.. .|..+|.+|..+.+.+
T Consensus 532 ~gri~~LD~rWNv~gLG~~~~i~~~---~i~~aaIIHYnG~~KPWle~~i~---~yr~~W~k~v~~~~~~ 595 (603)
T PLN02718 532 YNQTVALDKRWHVLGLGHESGVGAS---DIEQAAVIHYDGVMKPWLDIGIG---KYKRYWNIHVPYHHPY 595 (603)
T ss_pred cCceeecChHHhccCcccccccccc---ccCCCEEEEECCCCCccccCChh---hHHHHHHhhcCCCChH
Confidence 9999999999999998865321111 23567999999999999998654 4999999999988764
No 4
>PLN02523 galacturonosyltransferase
Probab=100.00 E-value=9.4e-47 Score=371.68 Aligned_cols=283 Identities=22% Similarity=0.465 Sum_probs=210.1
Q ss_pred CCcCCCCCcCCCCCCCCceEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHH-HHHHHHh-hCCcceEEE
Q 018535 48 FFHEAPAFRNGDSCNTQTIHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPD-VYSSINS-TFPYLNLKV 125 (354)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~-~~~~L~~-~~~~~~i~~ 125 (354)
.+.-.|.++++ +-+|+|+.+|. +.+++|+|.|++.|++.++++.|||++|+.+.. .+..... ...+..+++
T Consensus 236 ~~~~~~~l~dp-----~l~Hy~ifSdN--vlAAsVvInStv~Ns~~p~~~VFHIVTD~ln~~amk~Wf~~n~~~~a~I~V 308 (559)
T PLN02523 236 GKPPPPELEDP-----SLYHYAIFSDN--VIAASVVVNSAVKNAKEPWKHVFHVVTDRMNLAAMKVMFKMRDLNGAHVEV 308 (559)
T ss_pred CCCcchhccCC-----CcceEEEecCc--chhhhhhHHHHHHccCCCcceEEEEEeCCCCHHHHHHHHhhCCCCCcEEEE
Confidence 44555677777 88999999995 899999999999999888999999999999864 3333321 222567777
Q ss_pred EEecc-ccccc-------ccch----------------------hHH-hhccCchhhHHHhhhhhcccccCeEEEEecce
Q 018535 126 YKFDS-NRVRG-------KISK----------------------SIR-QALDQPLNYARIYLADIMPANVKRVIYLDSDL 174 (354)
Q Consensus 126 ~~~~~-~~~~~-------~is~----------------------~~~-~~~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~ 174 (354)
+.++. +.+.. .+.. ..+ ..+.++.+|+||+||++|| +++||||||+|+
T Consensus 309 ~~Iedf~~ln~~~~pvlk~l~s~~~~~~~f~~~~~~~~~~~~~~k~~~p~ylS~~ny~Rf~IPeLLP-~ldKVLYLD~DV 387 (559)
T PLN02523 309 KAVEDYKFLNSSYVPVLRQLESANLQKFYFENKLENATKDSSNMKFRNPKYLSMLNHLRFYLPEMYP-KLHRILFLDDDV 387 (559)
T ss_pred EEeehhhhcccccchHHHhhhhhhhhhhhccccccccccccccccccCcchhhHHHHHHHHHHHHhc-ccCeEEEEeCCE
Confidence 77763 21110 0000 000 2456778999999999999 699999999999
Q ss_pred EEeccHHHHHhcCCCCCeEEeecccccCcccccccccccchhhhcccCCCCCcceeeeeEEEecHHHHhcChHHHHHHHH
Q 018535 175 VVVDDIGKLWDVDLEGRVLAAPEYCHANFTNFFTDLFWSDRNLAKTFDGRDPCYFNTGVMVMNVEKWRQGGYSQRVEEWM 254 (354)
Q Consensus 175 IV~~Dl~eL~~~dl~g~~iAAv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yFNSGVmLinl~k~R~~~i~~~~~~~~ 254 (354)
||++||++||++||+|+++|||+||...+..+.....+++|...+.|. .+.||||+||||||+++||++++++++..|+
T Consensus 388 VVq~DLseLw~iDL~gkv~aAVeDc~~~~~r~~~~ln~s~p~i~~yFN-s~aC~wnsGVmlINL~~WRe~nITek~~~w~ 466 (559)
T PLN02523 388 VVQKDLTGLWKIDMDGKVNGAVETCFGSFHRYAQYLNFSHPLIKEKFN-PKACAWAYGMNIFDLDAWRREKCTEQYHYWQ 466 (559)
T ss_pred EecCCHHHHHhCcCCCceEEEehhhhhHHHHHHHhhcccchhhhhCcC-CCcccccCCcEEEeHHHHHHhchHHHHHHHH
Confidence 999999999999999999999999954322222111233333333343 4579999999999999999999999998777
Q ss_pred HHhccccccCCCCccHHHHHhccceeecCcccccccCCCCccccccccCCCCCCEEEEcCCCCCCCCCCCCCCCcccccc
Q 018535 255 VVQKQKRIYHLGSLPPFLLVLAGNIKGVDHRWNQHGLGGDNIEGKCRNLHPGPISLLHWSGKGKPWLRLDSRKPCTVDHL 334 (354)
Q Consensus 255 ~~~~~~~~~~~~DQd~LN~vf~~~i~~Lp~~wN~~~~~~~~~~~~~~~~~~~~~~IIHf~g~~KPW~~~~~~~~~~~~~l 334 (354)
+.+.+..+++.+.+++.|++|.|+++.||++||+.++|++.... .. ..+++.||||+|+.|||+..... +++++
T Consensus 467 ~ln~~~~l~DqdaLpp~LivF~gri~~LD~rWNvlglGy~~~i~--~~-~i~~paIIHYnG~~KPWle~~i~---~yr~~ 540 (559)
T PLN02523 467 NLNENRTLWKLGTLPPGLITFYSTTKPLDKSWHVLGLGYNPSIS--MD-EIRNAAVIHFNGNMKPWLDIAMN---QFKPL 540 (559)
T ss_pred HhccccccccccccchHHHHhcCceEecCchhhccCCccCCCcc--cc-ccCCCEEEEECCCCCccccCCCC---cchHH
Confidence 65444455555555566799999999999999999887643111 11 12467999999999999876543 58999
Q ss_pred cccccccCCCC
Q 018535 335 WAPYDLYRPPP 345 (354)
Q Consensus 335 W~~y~~~~~~~ 345 (354)
|++|....+.+
T Consensus 541 W~kYl~~~~~f 551 (559)
T PLN02523 541 WTKYVDYDMEF 551 (559)
T ss_pred HHHHHccCCHH
Confidence 99999887754
No 5
>PLN02742 Probable galacturonosyltransferase
Probab=100.00 E-value=3.1e-46 Score=367.67 Aligned_cols=285 Identities=26% Similarity=0.487 Sum_probs=226.2
Q ss_pred CcCCcCCCCCcCCCCCCCCceEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHH-HHHHHHh-hCCcceE
Q 018535 46 VPFFHEAPAFRNGDSCNTQTIHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPD-VYSSINS-TFPYLNL 123 (354)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~-~~~~L~~-~~~~~~i 123 (354)
.+.+.-+|.++++ +-.|.|+.+| -+.++.|+|.|...|+.+|+++.|||++|..+-. ++..+.. .++.+.+
T Consensus 213 ~~~~~~~~~l~d~-----~l~Hy~ifSd--NvlAasvvvnStv~nsk~P~~~VFHiVTD~~n~~aM~~WF~~n~~~~a~v 285 (534)
T PLN02742 213 AEEKRNSPRLVDN-----NLYHFCVFSD--NILATSVVVNSTVSNAKHPDQLVFHLVTDEVNYGAMQAWFAMNDFKGVTV 285 (534)
T ss_pred cccccccccccCC-----CcceEEEEec--cchhhhhhhhhhHhhhcCCCcEEEEEeechhhHHHHHHHHhhCCCCccEE
Confidence 4566677777777 8899999888 4557889999999999999999999999988753 4444432 2446677
Q ss_pred EEEEecc-cccccccch--------------------------hHH-hhccCchhhHHHhhhhhcccccCeEEEEecceE
Q 018535 124 KVYKFDS-NRVRGKISK--------------------------SIR-QALDQPLNYARIYLADIMPANVKRVIYLDSDLV 175 (354)
Q Consensus 124 ~~~~~~~-~~~~~~is~--------------------------~~~-~~~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~I 175 (354)
+++.++. ..+.+..+. ..+ ..+.++.+|+||+||+++| +++||||||+|+|
T Consensus 286 ~V~n~e~f~wl~~~~~pvl~ql~~~~~~~~yf~~~~~~~~~~~k~r~p~y~s~~~y~R~~lP~llp-~l~KvlYLD~DvV 364 (534)
T PLN02742 286 EVQKIEEFSWLNASYVPVLKQLQDSDTQSYYFSGSQDDGKTEIKFRNPKYLSMLNHLRFYIPEIYP-ALEKVVFLDDDVV 364 (534)
T ss_pred EEEEeccccccccccchHHHHhhhhhhhhhhcccccccccccccccCcccccHHHHHHHHHHHHhh-ccCeEEEEeCCEE
Confidence 8877753 222111000 011 3456788999999999999 6999999999999
Q ss_pred EeccHHHHHhcCCCCCeEEeecccccCcccccccccccchhhhcccCCCCCcceeeeeEEEecHHHHhcChHHHHHHHHH
Q 018535 176 VVDDIGKLWDVDLEGRVLAAPEYCHANFTNFFTDLFWSDRNLAKTFDGRDPCYFNTGVMVMNVEKWRQGGYSQRVEEWMV 255 (354)
Q Consensus 176 V~~Dl~eL~~~dl~g~~iAAv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yFNSGVmLinl~k~R~~~i~~~~~~~~~ 255 (354)
|++||++||++||+|+++|||+||+.++..|.....|++|..+..+. .+.||||+|||||||++||++++++.+..|++
T Consensus 365 V~~DL~eL~~~DL~~~viaAVedC~~~f~ry~~yLnfS~p~i~~~f~-~~aC~fNsGV~ViDL~~WRe~nITe~~~~w~e 443 (534)
T PLN02742 365 VQKDLTPLFSIDLHGNVNGAVETCLETFHRYHKYLNFSHPLISSHFD-PDACGWAFGMNVFDLVAWRKANVTAIYHYWQE 443 (534)
T ss_pred ecCChHHHhcCCCCCCEEEEeCchhhhhhhhhhhhcccchhhhccCC-CCccccccCcEEEeHHHHHhhcHHHHHHHHHH
Confidence 99999999999999999999999987776666555677777666554 46899999999999999999999998888888
Q ss_pred HhccccccCCCCccHHHHHhccceeecCcccccccCCCCccccccccCCCCCCEEEEcCCCCCCCCCCCCCCCccccccc
Q 018535 256 VQKQKRIYHLGSLPPFLLVLAGNIKGVDHRWNQHGLGGDNIEGKCRNLHPGPISLLHWSGKGKPWLRLDSRKPCTVDHLW 335 (354)
Q Consensus 256 ~~~~~~~~~~~DQd~LN~vf~~~i~~Lp~~wN~~~~~~~~~~~~~~~~~~~~~~IIHf~g~~KPW~~~~~~~~~~~~~lW 335 (354)
.+.+.++|+.|.+++++++|+|+++.||++||+.++|++.... ++ ...++.||||+|+.|||...+.. ++.++|
T Consensus 444 ~n~~~~l~d~gaLpp~LLaF~g~~~~LD~rWNv~gLG~~~~v~-~~--~i~~aaILHynG~~KPWl~~~i~---~yr~~W 517 (534)
T PLN02742 444 QNVDRTLWKLGTLPPGLLTFYGLTEPLDRRWHVLGLGYDTNID-PR--LIESAAVLHFNGNMKPWLKLAIE---RYKPLW 517 (534)
T ss_pred hccccccccccccchHHHHHcCcceecChhheecccccccccc-hh--hccCCeEEEECCCCCcccccCCc---ccchHH
Confidence 7666678888888888899999999999999999988752111 11 12467899999999999998654 488999
Q ss_pred ccccccCCCC
Q 018535 336 APYDLYRPPP 345 (354)
Q Consensus 336 ~~y~~~~~~~ 345 (354)
++|..+.+.+
T Consensus 518 ~kYl~~s~~f 527 (534)
T PLN02742 518 ERYVNYSHPY 527 (534)
T ss_pred HHHHccCCHH
Confidence 9999988764
No 6
>PLN02829 Probable galacturonosyltransferase
Probab=100.00 E-value=7e-46 Score=368.70 Aligned_cols=282 Identities=24% Similarity=0.484 Sum_probs=215.0
Q ss_pred CcCCCCCcCCCCCCCCceEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcH-HHHHHHHh-hCCcceEEEE
Q 018535 49 FHEAPAFRNGDSCNTQTIHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEP-DVYSSINS-TFPYLNLKVY 126 (354)
Q Consensus 49 ~~~~~~~~~~~~~~~~~i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~-~~~~~L~~-~~~~~~i~~~ 126 (354)
|..++.+.++ +-.|.|+.+| | +..+.|++.|.+.|+..|+++.|||++|..+- .++..+.. .+....+++.
T Consensus 320 ~p~~~~l~dp-----~l~Hy~ifSd-N-VLAasVVVnStv~na~~p~k~VFHivTD~~ny~aM~~WF~~n~~~~A~v~V~ 392 (639)
T PLN02829 320 FPNQEKLEDP-----QLYHYALFSD-N-VLAAAVVVNSTVTNAKHPSKHVFHIVTDRLNYAAMRMWFLVNPPGKATIQVQ 392 (639)
T ss_pred CCChhhccCC-----ccceEEEEec-c-eeEEEeeeehhhhcccCccceEEEEecCccchHHHHHHHhhCCCccceEEEE
Confidence 4444556666 8899999888 3 44678899999999999999999999999864 33333321 1223345444
Q ss_pred Eecc-ccccc-------ccc-------------------hhHH-hhccCchhhHHHhhhhhcccccCeEEEEecceEEec
Q 018535 127 KFDS-NRVRG-------KIS-------------------KSIR-QALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVD 178 (354)
Q Consensus 127 ~~~~-~~~~~-------~is-------------------~~~~-~~~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~ 178 (354)
.++. ..... .+. ...| ..+.+..+|+||+||++|| +++||||||+|+||++
T Consensus 393 nie~f~wln~~~~pvl~ql~~~~~~~~yf~~~~~~~~~~~k~r~p~ylS~lnY~RfyLPeLLP-~LdKVLYLD~DVVVqg 471 (639)
T PLN02829 393 NIEEFTWLNSSYSPVLKQLGSQSMIDYYFRAHRANSDSNLKYRNPKYLSILNHLRFYLPEIFP-KLNKVLFLDDDIVVQK 471 (639)
T ss_pred ehhhcccccccccHHHHHhhhhhhhhhhhhccccCcccccccCCcchhhHHHHHHHHHHHHhc-ccCeEEEEeCCEEeCC
Confidence 4321 00000 000 0011 3456778999999999999 6999999999999999
Q ss_pred cHHHHHhcCCCCCeEEeecccccCcccccccccccchhhhcccCCCCCcceeeeeEEEecHHHHhcChHHHHHHHHHHhc
Q 018535 179 DIGKLWDVDLEGRVLAAPEYCHANFTNFFTDLFWSDRNLAKTFDGRDPCYFNTGVMVMNVEKWRQGGYSQRVEEWMVVQK 258 (354)
Q Consensus 179 Dl~eL~~~dl~g~~iAAv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yFNSGVmLinl~k~R~~~i~~~~~~~~~~~~ 258 (354)
||++||++||+|+++|||+||...|..+.....|.++.....|. .+.||||+|||||||++||+++++++++.|++.+.
T Consensus 472 DLseLw~iDL~gkviAAVedc~~~f~r~~~~l~fs~p~i~~~Fn-~~~CyFNSGVmVINL~~WRe~nITe~y~~wm~~n~ 550 (639)
T PLN02829 472 DLTGLWSIDLKGNVNGAVETCGESFHRFDRYLNFSNPLISKNFD-PHACGWAYGMNVFDLDEWKRQNITEVYHSWQKLNH 550 (639)
T ss_pred ChHHHHhCCCCCceEEEeccchhhhhhhhhhhhccchHhhhccC-CcccceecceEEEeHHHHHHhChHHHHHHHHHHcc
Confidence 99999999999999999999987665554444566665555454 36899999999999999999999999999998766
Q ss_pred cccccCCCCccHHHHHhccceeecCcccccccCCCCccccccccCCCCCCEEEEcCCCCCCCCCCCCCCCcccccccccc
Q 018535 259 QKRIYHLGSLPPFLLVLAGNIKGVDHRWNQHGLGGDNIEGKCRNLHPGPISLLHWSGKGKPWLRLDSRKPCTVDHLWAPY 338 (354)
Q Consensus 259 ~~~~~~~~DQd~LN~vf~~~i~~Lp~~wN~~~~~~~~~~~~~~~~~~~~~~IIHf~g~~KPW~~~~~~~~~~~~~lW~~y 338 (354)
...+|+.|.++++.++|+|+++.||++||+.++|++.- ..++.. .++.||||+|+.|||...+.. +|+.+|.+|
T Consensus 551 ~r~L~dlgaLPp~Ll~F~g~i~~LD~rWNv~GLGy~~~-v~~~~i--~~aaIIHynG~~KPWle~~i~---~yr~lW~kY 624 (639)
T PLN02829 551 DRQLWKLGTLPPGLITFWKRTYPLDRSWHVLGLGYNPN-VNQRDI--ERAAVIHYNGNMKPWLEIGIP---KYRNYWSKY 624 (639)
T ss_pred CCccccccCCChHHHHhcCceEecChhheecCCCCCcc-cchhcc--cCCeEEEECCCCCccccCCcc---cchHHHHHH
Confidence 66778888888888899999999999999999987521 112222 456899999999999998654 499999999
Q ss_pred cccCCCC
Q 018535 339 DLYRPPP 345 (354)
Q Consensus 339 ~~~~~~~ 345 (354)
.++.+.+
T Consensus 625 l~~~~~f 631 (639)
T PLN02829 625 VDYDQVY 631 (639)
T ss_pred HhcCchH
Confidence 9988764
No 7
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=100.00 E-value=4.7e-45 Score=343.53 Aligned_cols=259 Identities=19% Similarity=0.344 Sum_probs=183.5
Q ss_pred eEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHHhh--CCcceEEEEEecccccccccchhHHh
Q 018535 66 IHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINST--FPYLNLKVYKFDSNRVRGKISKSIRQ 143 (354)
Q Consensus 66 i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~~~--~~~~~i~~~~~~~~~~~~~is~~~~~ 143 (354)
+.||+|. .+|.++++|+|+||+.|+. ..++|||++++++++..+.|.+. ..+.++.++.++.. ...++. ...
T Consensus 3 ~~iv~~~-~~y~~~~~~~i~Sil~n~~--~~~~fhii~d~~s~~~~~~l~~~~~~~~~~i~f~~i~~~--~~~~~~-~~~ 76 (280)
T cd06431 3 VAIVCAG-YNASRDVVTLVKSVLFYRR--NPLHFHLITDEIARRILATLFQTWMVPAVEVSFYNAEEL--KSRVSW-IPN 76 (280)
T ss_pred EEEEEcc-CCcHHHHHHHHHHHHHcCC--CCEEEEEEECCcCHHHHHHHHHhccccCcEEEEEEhHHh--hhhhcc-Ccc
Confidence 5678888 8999999999999999975 56999999999988765555433 23557777776421 111110 001
Q ss_pred hccCc-hhhHHHhhhhhcccccCeEEEEecceEEeccHHHHHhc--CCCC-CeEEeecccccCcccccccccccchhhhc
Q 018535 144 ALDQP-LNYARIYLADIMPANVKRVIYLDSDLVVVDDIGKLWDV--DLEG-RVLAAPEYCHANFTNFFTDLFWSDRNLAK 219 (354)
Q Consensus 144 ~~~s~-~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~Dl~eL~~~--dl~g-~~iAAv~d~~~~~~~~~~~~~~~~~~~~~ 219 (354)
.+.+. .+|+||++|++||++++||||||||+||++||++||++ ++.+ +++||+++.. .++....++. ..
T Consensus 77 ~~~s~~y~y~RL~ip~llp~~~dkvLYLD~Diiv~~di~eL~~~~~~~~~~~~~a~v~~~~----~~~~~~~~~~---~~ 149 (280)
T cd06431 77 KHYSGIYGLMKLVLTEALPSDLEKVIVLDTDITFATDIAELWKIFHKFTGQQVLGLVENQS----DWYLGNLWKN---HR 149 (280)
T ss_pred cchhhHHHHHHHHHHHhchhhcCEEEEEcCCEEEcCCHHHHHHHhhhcCCCcEEEEeccch----hhhhhhhhhc---cC
Confidence 12332 37799999999997899999999999999999999998 6754 5777776532 1222111111 00
Q ss_pred ccCCCCCcceeeeeEEEecHHHHhcChHHHHHHHHHHhcc-ccccCCCCccHHHHHhccc---eeecCcccccccCCCCc
Q 018535 220 TFDGRDPCYFNTGVMVMNVEKWRQGGYSQRVEEWMVVQKQ-KRIYHLGSLPPFLLVLAGN---IKGVDHRWNQHGLGGDN 295 (354)
Q Consensus 220 ~~~~~~~~yFNSGVmLinl~k~R~~~i~~~~~~~~~~~~~-~~~~~~~DQd~LN~vf~~~---i~~Lp~~wN~~~~~~~~ 295 (354)
...+ ...||||||||||+++||++++++++....+.... .....++|||+||.+|.++ ++.||++||++... ..
T Consensus 150 ~~~~-~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~DQDiLN~v~~~~~~~~~~L~~~wN~~~~~-~~ 227 (280)
T cd06431 150 PWPA-LGRGFNTGVILLDLDKLRKMKWESMWRLTAERELMSMLSTSLADQDIFNAVIKQNPFLVYQLPCAWNVQLSD-HT 227 (280)
T ss_pred CCcc-cccceeeeeeeeeHHHHHhhCHHHHHHHHHHHHHhhcCCCCcCcHHHHHHHHcCCcceeEECCCccccccCc-cc
Confidence 1111 13599999999999999999999998765543211 1224579999999999999 89999999988422 11
Q ss_pred cccccccCCCCCCEEEEcCCCCCCCCCCCCCCCcccccccccccccC
Q 018535 296 IEGKCRNLHPGPISLLHWSGKGKPWLRLDSRKPCTVDHLWAPYDLYR 342 (354)
Q Consensus 296 ~~~~~~~~~~~~~~IIHf~g~~KPW~~~~~~~~~~~~~lW~~y~~~~ 342 (354)
....+.. ....++||||+|+.|||...... .+++++|..|.+++
T Consensus 228 ~~~~~~~-~~~~p~IIHf~g~~KPW~~~~~~--~~~~~~~~~~~~~~ 271 (280)
T cd06431 228 RSEQCYR-DVSDLKVIHWNSPKKLRVKNKHV--EFFRNLYLTFLEYD 271 (280)
T ss_pred hHhHhhc-CcCCCEEEEeCCCCCCCCcCCCC--hHHHHHHHHHHhcC
Confidence 1111111 13567999999999999866432 26999999999877
No 8
>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase
Probab=100.00 E-value=1.1e-44 Score=359.66 Aligned_cols=283 Identities=24% Similarity=0.467 Sum_probs=217.1
Q ss_pred CCcCCCCCcCCCCCCCCceEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcH-HHHHHHHh-hCCcceEEE
Q 018535 48 FFHEAPAFRNGDSCNTQTIHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEP-DVYSSINS-TFPYLNLKV 125 (354)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~-~~~~~L~~-~~~~~~i~~ 125 (354)
.|+.++.|+++ +-.|.|+.+| | +..+.|++.|.+.|+..|+++.|||++|..+- .++..+.. .+....+++
T Consensus 333 ~~p~~~~l~dp-----~l~Hy~ifSD-N-VLAaSVVVnSTv~na~~P~k~VFHiVTD~~ny~aM~~WF~~n~~~~A~V~V 405 (657)
T PLN02910 333 DYVNKKKLEDP-----SLYHYAIFSD-N-VLATSVVVNSTVLHAKEPQKHVFHIVTDKLNFAAMKMWFIINPPAKATIQV 405 (657)
T ss_pred cCCChhhccCC-----cceeEEEEec-c-eeeEEeehhhhhhcccCccceEEEEecCccccHHHHHHHhhCCCccceEEE
Confidence 35555667777 8899999888 3 44678999999999999999999999999864 33333321 122333444
Q ss_pred EEecc------cc----------------ccc-cc--------chhHH-hhccCchhhHHHhhhhhcccccCeEEEEecc
Q 018535 126 YKFDS------NR----------------VRG-KI--------SKSIR-QALDQPLNYARIYLADIMPANVKRVIYLDSD 173 (354)
Q Consensus 126 ~~~~~------~~----------------~~~-~i--------s~~~~-~~~~s~~~y~Rl~i~~llp~~~dRvLYLD~D 173 (354)
..++. .. +.. +. +...| ..+.++.+|+||+||++|| +++||||||+|
T Consensus 406 ~nie~f~wln~~~~pvl~qles~~~~~~yf~~~~~~~~~~~~~~~k~r~p~ylS~lnY~Rf~LPelLp-~l~KVLYLD~D 484 (657)
T PLN02910 406 ENIDDFKWLNSSYCSVLRQLESARIKEYYFKANHPSSLSAGADNLKYRNPKYLSMLNHLRFYLPEVYP-KLEKILFLDDD 484 (657)
T ss_pred eehhhcccccccccHHHHHHhhhhhhhhhhhccccccccccccccccCCcchhhHHHHHHHHHHHHhh-hcCeEEEEeCC
Confidence 43321 00 000 00 00011 3456778999999999999 69999999999
Q ss_pred eEEeccHHHHHhcCCCCCeEEeecccccCcccccccccccchhhhcccCCCCCcceeeeeEEEecHHHHhcChHHHHHHH
Q 018535 174 LVVVDDIGKLWDVDLEGRVLAAPEYCHANFTNFFTDLFWSDRNLAKTFDGRDPCYFNTGVMVMNVEKWRQGGYSQRVEEW 253 (354)
Q Consensus 174 ~IV~~Dl~eL~~~dl~g~~iAAv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yFNSGVmLinl~k~R~~~i~~~~~~~ 253 (354)
+||++||++||++||+|+++|||++|..+|..+.....|.++.+.+.|.. +.||||+|||||||++||++++++.+..|
T Consensus 485 VVV~gDLseLw~iDL~g~v~AAVedc~~~f~r~~~ylnfs~P~i~~yFNs-~aCyfNsGVmVIDL~~WRe~nITe~ye~w 563 (657)
T PLN02910 485 IVVQKDLTPLWSIDMQGMVNGAVETCKESFHRFDKYLNFSNPKISENFDP-NACGWAFGMNMFDLKEWRKRNITGIYHYW 563 (657)
T ss_pred EEecCchHHHHhCCcCCceEEEecccchhhhhhhhhhccCChhhhhccCC-CCceeecccEEEeHHHHHHhhHHHHHHHH
Confidence 99999999999999999999999999876655555556777777665543 68999999999999999999999988888
Q ss_pred HHHhccccccCCCCccHHHHHhccceeecCcccccccCCCCccccccccCCCCCCEEEEcCCCCCCCCCCCCCCCccccc
Q 018535 254 MVVQKQKRIYHLGSLPPFLLVLAGNIKGVDHRWNQHGLGGDNIEGKCRNLHPGPISLLHWSGKGKPWLRLDSRKPCTVDH 333 (354)
Q Consensus 254 ~~~~~~~~~~~~~DQd~LN~vf~~~i~~Lp~~wN~~~~~~~~~~~~~~~~~~~~~~IIHf~g~~KPW~~~~~~~~~~~~~ 333 (354)
++.+.+..+|++|.++++.++|+|++..||++||++++|++.....+ ...++.||||+|+.|||...+.. +|..
T Consensus 564 ~eln~~~~L~dqgsLPpgLLvF~g~i~pLD~rWNv~GLGyd~~v~~~---~i~~AAVLHynG~~KPWl~l~i~---~Yr~ 637 (657)
T PLN02910 564 QDLNEDRTLWKLGSLPPGLITFYNLTYPLDRSWHVLGLGYDPALNQT---EIENAAVVHYNGNYKPWLDLAIA---KYKP 637 (657)
T ss_pred HHhcccccccccCCCChHHHHHhCceeecCchheecCCCCCcccccc---cccCcEEEEeCCCCCcccccCcc---cchH
Confidence 88766667777777777779999999999999999999976543322 22467999999999999998664 5999
Q ss_pred ccccccccCCCC
Q 018535 334 LWAPYDLYRPPP 345 (354)
Q Consensus 334 lW~~y~~~~~~~ 345 (354)
+|.+|....+.+
T Consensus 638 ~W~kYl~~d~~f 649 (657)
T PLN02910 638 YWSRYVQYDNPY 649 (657)
T ss_pred HHHHHccCCChH
Confidence 999999877654
No 9
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=100.00 E-value=5.2e-44 Score=331.59 Aligned_cols=240 Identities=22% Similarity=0.368 Sum_probs=178.0
Q ss_pred eEEEEEeCc-chhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHHhhC--CcceEEEEEecccccccccchhHH
Q 018535 66 IHITMTLDA-NYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTF--PYLNLKVYKFDSNRVRGKISKSIR 142 (354)
Q Consensus 66 i~I~~~~D~-~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~~~~--~~~~i~~~~~~~~~~~~~is~~~~ 142 (354)
|||++++++ +|+++++|+++||++|++. .++|||++++++++.++.|+... .+.+++++.++........ ..
T Consensus 1 ~~i~~~a~d~~y~~~~~v~i~Sl~~~~~~--~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~~~~~~~~~~~---~~ 75 (246)
T cd00505 1 IAIVIVATGDEYLRGAIVLMKSVLRHRTK--PLRFHVLTNPLSDTFKAALDNLRKLYNFNYELIPVDILDSVDSE---HL 75 (246)
T ss_pred CeEEEEecCcchhHHHHHHHHHHHHhCCC--CeEEEEEEccccHHHHHHHHHHHhccCceEEEEeccccCcchhh---hh
Confidence 688875555 9999999999999999874 69999999999987766665532 2456777877643222111 11
Q ss_pred hhccCchhhHHHhhhhhcccccCeEEEEecceEEeccHHHHHhcCCCCCeEEeecccccCcccccccccccchhhhcccC
Q 018535 143 QALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDDIGKLWDVDLEGRVLAAPEYCHANFTNFFTDLFWSDRNLAKTFD 222 (354)
Q Consensus 143 ~~~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~Dl~eL~~~dl~g~~iAAv~d~~~~~~~~~~~~~~~~~~~~~~~~ 222 (354)
..+.++.+|+||++|+++| +++||||||+|+||++||++||+++++++.+||+.||...... ..++ .....
T Consensus 76 ~~~~~~~~y~RL~i~~llp-~~~kvlYLD~D~iv~~di~~L~~~~l~~~~~aav~d~~~~~~~----~~~~---~~~~~- 146 (246)
T cd00505 76 KRPIKIVTLTKLHLPNLVP-DYDKILYVDADILVLTDIDELWDTPLGGQELAAAPDPGDRREG----KYYR---QKRSH- 146 (246)
T ss_pred cCccccceeHHHHHHHHhh-ccCeEEEEcCCeeeccCHHHHhhccCCCCeEEEccCchhhhcc----chhh---cccCC-
Confidence 2355778999999999999 8999999999999999999999999999999999987532110 0010 00111
Q ss_pred CCCCcceeeeeEEEecHHHHhcChHHHHHHHHHHhccccccCCCCccHHHHHhccc---eeecCcccccccCCCCccccc
Q 018535 223 GRDPCYFNTGVMVMNVEKWRQGGYSQRVEEWMVVQKQKRIYHLGSLPPFLLVLAGN---IKGVDHRWNQHGLGGDNIEGK 299 (354)
Q Consensus 223 ~~~~~yFNSGVmLinl~k~R~~~i~~~~~~~~~~~~~~~~~~~~DQd~LN~vf~~~---i~~Lp~~wN~~~~~~~~~~~~ 299 (354)
..+.+||||||||+|+++||++++.+++.++..... .....+|||+||.+|.++ +..||++||++..+..... .
T Consensus 147 ~~~~~yfNsGVmlinl~~~r~~~~~~~~~~~~~~~~--~~~~~~DQd~LN~~~~~~~~~i~~L~~~wN~~~~~~~~~~-~ 223 (246)
T cd00505 147 LAGPDYFNSGVFVVNLSKERRNQLLKVALEKWLQSL--SSLSGGDQDLLNTFFKQVPFIVKSLPCIWNVRLTGCYRSL-N 223 (246)
T ss_pred CCCCCceeeeeEEEechHHHHHHHHHHHHHHHHhhc--ccCccCCcHHHHHHHhcCCCeEEECCCeeeEEecCccccc-c
Confidence 234679999999999999998888888777655322 224578999999999998 9999999999865432111 1
Q ss_pred cccCCCCCCEEEEcCCCCCCCCC
Q 018535 300 CRNLHPGPISLLHWSGKGKPWLR 322 (354)
Q Consensus 300 ~~~~~~~~~~IIHf~g~~KPW~~ 322 (354)
+.....++++||||+|+.|||++
T Consensus 224 ~~~~~~~~~~iiHy~g~~KPW~~ 246 (246)
T cd00505 224 CFKAFVKNAKVIHFNGPTKPWNK 246 (246)
T ss_pred chhhhcCCCEEEEeCCCCCCCCC
Confidence 11112357899999999999974
No 10
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=100.00 E-value=1.8e-44 Score=334.77 Aligned_cols=240 Identities=21% Similarity=0.333 Sum_probs=186.4
Q ss_pred eEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHHhhCC--cceEEEEEecccccccccchhHHh
Q 018535 66 IHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTFP--YLNLKVYKFDSNRVRGKISKSIRQ 143 (354)
Q Consensus 66 i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~~~~~--~~~i~~~~~~~~~~~~~is~~~~~ 143 (354)
||||+|+|++|++++++++.||++|++. +.++|||++++++++.++.|++... ..+++++.++......... ..
T Consensus 1 ~~I~~~~d~~y~~~~~~~l~Sl~~~~~~-~~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~i~~~~~~~~~~---~~ 76 (248)
T cd04194 1 MNIVFAIDDNYAPYLAVTIKSILANNSK-RDYDFYILNDDISEENKKKLKELLKKYNSSIEFIKIDNDDFKFFPA---TT 76 (248)
T ss_pred CCEEEEecHhhHHHHHHHHHHHHhcCCC-CceEEEEEeCCCCHHHHHHHHHHHHhcCCeEEEEEcCHHHHhcCCc---cc
Confidence 6999999999999999999999999985 5799999999998876666765432 5678888887654433211 12
Q ss_pred hccCchhhHHHhhhhhcccccCeEEEEecceEEeccHHHHHhcCCCCCeEEeecccccCcccccccccccchhhhcccCC
Q 018535 144 ALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDDIGKLWDVDLEGRVLAAPEYCHANFTNFFTDLFWSDRNLAKTFDG 223 (354)
Q Consensus 144 ~~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~Dl~eL~~~dl~g~~iAAv~d~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (354)
.+.+..+|+||++|+++| +++||||||+|+||++||++||++|++|+.+||+.|+....... . ... ....
T Consensus 77 ~~~~~~~y~rl~l~~ll~-~~~rvlylD~D~lv~~di~~L~~~~~~~~~~aa~~d~~~~~~~~-------~-~~~-~~~~ 146 (248)
T cd04194 77 DHISYATYYRLLIPDLLP-DYDKVLYLDADIIVLGDLSELFDIDLGDNLLAAVRDPFIEQEKK-------R-KRR-LGGY 146 (248)
T ss_pred ccccHHHHHHHHHHHHhc-ccCEEEEEeCCEEecCCHHHHhcCCcCCCEEEEEecccHHHHHH-------H-Hhh-cCCC
Confidence 345678999999999999 79999999999999999999999999999999999875421100 0 000 1113
Q ss_pred CCCcceeeeeEEEecHHHHhcChHHHHHHHHHHhccccccCCCCccHHHHHhccceeecCcccccccCCCCccccc----
Q 018535 224 RDPCYFNTGVMVMNVEKWRQGGYSQRVEEWMVVQKQKRIYHLGSLPPFLLVLAGNIKGVDHRWNQHGLGGDNIEGK---- 299 (354)
Q Consensus 224 ~~~~yFNSGVmLinl~k~R~~~i~~~~~~~~~~~~~~~~~~~~DQd~LN~vf~~~i~~Lp~~wN~~~~~~~~~~~~---- 299 (354)
.+.+||||||||+|+++||+.+++++++++++... ..+.++||++||.+|.+++..||.+||++..........
T Consensus 147 ~~~~yfNsGv~l~nl~~~r~~~~~~~~~~~~~~~~--~~~~~~DQd~LN~~~~~~~~~L~~~~N~~~~~~~~~~~~~~~~ 224 (248)
T cd04194 147 DDGSYFNSGVLLINLKKWREENITEKLLELIKEYG--GRLIYPDQDILNAVLKDKILYLPPRYNFQTGFYYLLKKKSKEE 224 (248)
T ss_pred cccceeeecchheeHHHHHHhhhHHHHHHHHHhCC--CceeeCChHHHHHHHhCCeEEcCcccccchhHhHHhhccchhH
Confidence 35679999999999999999999999999998543 235689999999999999999999999985432211000
Q ss_pred -cccCCCCCCEEEEcCCCCCCCC
Q 018535 300 -CRNLHPGPISLLHWSGKGKPWL 321 (354)
Q Consensus 300 -~~~~~~~~~~IIHf~g~~KPW~ 321 (354)
......++++||||+|+.|||+
T Consensus 225 ~~~~~~~~~~~iiHf~g~~KPW~ 247 (248)
T cd04194 225 QELEEARKNPVIIHYTGSDKPWN 247 (248)
T ss_pred HHHHHHhcCCEEEEeCCCCCCCC
Confidence 0001235689999999999997
No 11
>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=8.3e-44 Score=338.26 Aligned_cols=264 Identities=22% Similarity=0.341 Sum_probs=201.5
Q ss_pred ceEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHHh---hCCcceEEEEEecccccccccchhH
Q 018535 65 TIHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINS---TFPYLNLKVYKFDSNRVRGKISKSI 141 (354)
Q Consensus 65 ~i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~~---~~~~~~i~~~~~~~~~~~~~is~~~ 141 (354)
.++||+++|+||+.+++|+|+|++.|++. ..+.||++++++++|..+.|++ .| ...+.++.+|.+.+...++.
T Consensus 2 ~~~Iv~a~D~nY~~~~gvsI~SiL~~n~~-~~~~fhil~~~i~~e~~~~l~~~~~~f-~~~i~~~~id~~~~~~~~~~-- 77 (325)
T COG1442 2 TIPIAFAFDKNYLIPAGVSIYSLLEHNRK-IFYKFHILVDGLNEEDKKKLNETAEPF-KSFIVLEVIDIEPFLDYPPF-- 77 (325)
T ss_pred cccEEEEcccccchhHHHHHHHHHHhCcc-ccEEEEEEecCCCHHHHHHHHHHHHhh-ccceeeEEEechhhhccccc--
Confidence 58999999999999999999999999974 4799999999999886666654 34 23566777776665554421
Q ss_pred HhhccCchhhHHHhhhhhcccccCeEEEEecceEEeccHHHHHhcCCCCCeEEeecccccCcccccccccccchhhhccc
Q 018535 142 RQALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDDIGKLWDVDLEGRVLAAPEYCHANFTNFFTDLFWSDRNLAKTF 221 (354)
Q Consensus 142 ~~~~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~Dl~eL~~~dl~g~~iAAv~d~~~~~~~~~~~~~~~~~~~~~~~ 221 (354)
..+++.++|+|+++++++|+ ++|+||||+|+||+|||++||.++++++++|||.|.... + +.+...++..
T Consensus 78 -~~~~s~~v~~R~fiadlf~~-~dK~lylD~Dvi~~g~l~~lf~~~~~~~~~aaV~D~~~~---~-----~~~~~~~~~~ 147 (325)
T COG1442 78 -TKRFSKMVLVRYFLADLFPQ-YDKMLYLDVDVIFCGDLSELFFIDLEEYYLAAVRDVFSH---Y-----MKEGALRLEK 147 (325)
T ss_pred -ccchHHHHHHHHHHHHhccc-cCeEEEEecCEEEcCcHHHHHhcCCCcceEEEEeehhhh---h-----hhhhhhHhhh
Confidence 23456789999999999995 699999999999999999999999999999999986431 1 1111111111
Q ss_pred CCCCCcceeeeeEEEecHHHHhcChHHHHHHHHHHhccccccCCCCccHHHHHhccceeecCcccccccCCCCccccccc
Q 018535 222 DGRDPCYFNTGVMVMNVEKWRQGGYSQRVEEWMVVQKQKRIYHLGSLPPFLLVLAGNIKGVDHRWNQHGLGGDNIEGKCR 301 (354)
Q Consensus 222 ~~~~~~yFNSGVmLinl~k~R~~~i~~~~~~~~~~~~~~~~~~~~DQd~LN~vf~~~i~~Lp~~wN~~~~~~~~~~~~~~ 301 (354)
......|||||||++|++.||+++++++++++++... ..+.++|||+||.+|++++..||.+||++..........+.
T Consensus 148 ~~~~~~yFNaG~llinl~~W~~~~i~~k~i~~~~~~~--~~~~~~DQdiLN~i~~~~~~~L~~~YN~~~~~~~~~~~~~~ 225 (325)
T COG1442 148 GDLEGSYFNAGVLLINLKLWREENIFEKLIELLKDKE--NDLLYPDQDILNMIFEDRVLELPIRYNAIPYIDSQLKDKYI 225 (325)
T ss_pred cccccccCccceeeehHHHHHHhhhHHHHHHHHhccc--cccCCccccHHHHHHHhhhhccCcccceeehhhhccchhhh
Confidence 2234689999999999999999999999999987543 34568999999999999999999999998543222221111
Q ss_pred cCCCCCCEEEEcCCCCCCCCCCCCCCCcccccccccccccCCCCC
Q 018535 302 NLHPGPISLLHWSGKGKPWLRLDSRKPCTVDHLWAPYDLYRPPPS 346 (354)
Q Consensus 302 ~~~~~~~~IIHf~g~~KPW~~~~~~~~~~~~~lW~~y~~~~~~~~ 346 (354)
.....++.|+||+|+.|||+......+ -...|......+|-..
T Consensus 226 ~~~~~~~~iiHy~g~~KPW~~~~~~~~--~~~~w~~i~~~~p~~~ 268 (325)
T COG1442 226 YPFGDDPVILHYAGPTKPWHSDSSNYP--RSHEWHEILAETPWKN 268 (325)
T ss_pred ccCCCCceEEEecCCCCCCcCcccccc--HHHHHHHHHhcCCccc
Confidence 223456789999999999999865532 2577777766665544
No 12
>PLN02870 Probable galacturonosyltransferase
Probab=100.00 E-value=3.9e-44 Score=352.19 Aligned_cols=275 Identities=25% Similarity=0.517 Sum_probs=203.5
Q ss_pred CCCCcCCCCCCCCceEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcH-HHHHHHHh-hCCcceEEEEEec
Q 018535 52 APAFRNGDSCNTQTIHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEP-DVYSSINS-TFPYLNLKVYKFD 129 (354)
Q Consensus 52 ~~~~~~~~~~~~~~i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~-~~~~~L~~-~~~~~~i~~~~~~ 129 (354)
.|.++++ +-.|.|+.+| | +..+.|++.|.+.|+.+|+++.|||++|..+- .++..... .+....+++..++
T Consensus 198 ~~~l~dp-----~~~Hy~ifSd-N-vLAasVvvnStv~~a~~p~~~VFHvvTD~~n~~aM~~WF~~n~~~~a~v~V~~~e 270 (533)
T PLN02870 198 LPVLSDN-----SYHHFVLSTD-N-ILAASVVVSSTVQSSLKPEKIVFHVITDKKTYAGMHSWFALNSVSPAIVEVKGVH 270 (533)
T ss_pred cccccCC-----cceeEEEEec-c-eeEEEeeeehhhhcccCccceEEEEecCccccHHHHHHHhhCCCccceEEEEehh
Confidence 5667777 8899999888 3 44677899999999999999999999999864 33333221 1222334443332
Q ss_pred c------ccc------c----------c--cc----ch-----------hHHhhccCchhhHHHhhhhhcccccCeEEEE
Q 018535 130 S------NRV------R----------G--KI----SK-----------SIRQALDQPLNYARIYLADIMPANVKRVIYL 170 (354)
Q Consensus 130 ~------~~~------~----------~--~i----s~-----------~~~~~~~s~~~y~Rl~i~~llp~~~dRvLYL 170 (354)
. ..+ + + .. +. ..+..+.++.+|+||+||++|| +++|||||
T Consensus 271 ~f~wl~~~~~pvl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~ylS~lny~Rl~LPelLP-~LdKVLYL 349 (533)
T PLN02870 271 QFDWLTRENVPVLEAVESHNGIRNYYHGNHIAGANLSETTPRTFASKLQARSPKYISLLNHLRIYLPELFP-NLDKVVFL 349 (533)
T ss_pred hccccccccchHHHHHhhhHHHHHHhhcccccccccccccchhhhcccccCCccccCHHHHHHHHHHHHhh-hcCeEEEE
Confidence 1 000 0 0 00 00 0123456788999999999999 79999999
Q ss_pred ecceEEeccHHHHHhcCCCCCeEEeecccccC--------cccccccccccchhhhcccCCCCCcceeeeeEEEecHHHH
Q 018535 171 DSDLVVVDDIGKLWDVDLEGRVLAAPEYCHAN--------FTNFFTDLFWSDRNLAKTFDGRDPCYFNTGVMVMNVEKWR 242 (354)
Q Consensus 171 D~D~IV~~Dl~eL~~~dl~g~~iAAv~d~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~yFNSGVmLinl~k~R 242 (354)
|+|+||++||++||++||+|+++|||+||... +..|++ +++|.....+. .+.||||||||||||++||
T Consensus 350 D~DVVVqgDLseLw~iDL~gkviaAVeDc~~~~~~~~~~~~~~YfN---fs~p~i~~~fd-~~~cyfNSGVlLINL~~WR 425 (533)
T PLN02870 350 DDDVVIQRDLSPLWDIDLGGKVNGAVETCRGEDEWVMSKRFRNYFN---FSHPLIAKNLD-PEECAWAYGMNIFDLRAWR 425 (533)
T ss_pred eCCEEecCcHHHHhhCCCCCceEEEEccccccchhhhhhhhhhhcc---cccchhhcccC-cccceeeccchhccHHHHH
Confidence 99999999999999999999999999998431 223443 34554444453 4689999999999999999
Q ss_pred hcChHHHHHHHHHHhccccccCCCCccHH---HHHhccceeecCcccccccCCCCccccccccCCCCCCEEEEcCCCCCC
Q 018535 243 QGGYSQRVEEWMVVQKQKRIYHLGSLPPF---LLVLAGNIKGVDHRWNQHGLGGDNIEGKCRNLHPGPISLLHWSGKGKP 319 (354)
Q Consensus 243 ~~~i~~~~~~~~~~~~~~~~~~~~DQd~L---N~vf~~~i~~Lp~~wN~~~~~~~~~~~~~~~~~~~~~~IIHf~g~~KP 319 (354)
++++++++.+|++.+...+ ..+.||++| |++|.|+++.||.+||+.++|++.. ... . ..++++||||+|+.||
T Consensus 426 e~nITek~~~~l~~n~~~~-l~l~DQdaLp~~livf~g~v~~LD~rWN~~gLgy~~~-~~~-~-~i~~aaIIHY~G~~KP 501 (533)
T PLN02870 426 KTNIRETYHSWLKENLKSN-LTMWKLGTLPPALIAFKGHVHPIDPSWHMLGLGYQSK-TNI-E-SVKKAAVIHYNGQSKP 501 (533)
T ss_pred HcChHHHHHHHHHhhhhcC-ceecccccccHhHHHhcCceEECChHHhcCCCCCccc-ccc-c-ccCCcEEEEECCCCCC
Confidence 9999999999997543221 335677776 7899999999999999998876421 111 1 2246799999999999
Q ss_pred CCCCCCCCCcccccccccccccCCCC
Q 018535 320 WLRLDSRKPCTVDHLWAPYDLYRPPP 345 (354)
Q Consensus 320 W~~~~~~~~~~~~~lW~~y~~~~~~~ 345 (354)
|+..... +++.+|.+|..+.+.+
T Consensus 502 W~~~~~~---~yr~~W~kYl~~s~~f 524 (533)
T PLN02870 502 WLEIGFE---HLRPFWTKYVNYSNDF 524 (533)
T ss_pred ccccCcc---chhHHHHHHHccCchH
Confidence 9987654 4999999999988875
No 13
>PLN02769 Probable galacturonosyltransferase
Probab=100.00 E-value=1.2e-43 Score=355.09 Aligned_cols=276 Identities=21% Similarity=0.372 Sum_probs=204.8
Q ss_pred CCcCCCCCcCCCCCCCCceEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcH-HHHHHHHh-hCCcceEEE
Q 018535 48 FFHEAPAFRNGDSCNTQTIHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEP-DVYSSINS-TFPYLNLKV 125 (354)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~-~~~~~L~~-~~~~~~i~~ 125 (354)
.|..++.|+++ +-.|.|+.+| -+..+.|+|.|...|+..|+++.|||++|..+- .++..+.. .+....+++
T Consensus 318 ~~~~~~~l~d~-----~l~Hy~ifSd--NvlAasvvvNStv~na~~p~~~VFHiVTD~~n~~am~~WF~~n~~~~a~v~v 390 (629)
T PLN02769 318 EDSNSEKFSDP-----SLRHYVIFSK--NVLAASVVINSTVVHSRESGNIVFHVLTDAQNYYAMKHWFDRNSYKEAAVQV 390 (629)
T ss_pred cCCchhhccCC-----ccceEEEEec--cceeeeeehhhhhhhccCccceEEEEecChhhHHHHHHHHhcCCCccceEEE
Confidence 45556667777 8899999888 355688999999999999999999999998864 34444322 122223333
Q ss_pred EEecccccc----------------------cccc-hh-HHhhccCchhhHHHhhhhhcccccCeEEEEecceEEeccHH
Q 018535 126 YKFDSNRVR----------------------GKIS-KS-IRQALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDDIG 181 (354)
Q Consensus 126 ~~~~~~~~~----------------------~~is-~~-~~~~~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~Dl~ 181 (354)
..++.-.+. +..+ .. .+..+.++.+|+||+||++|| +++||||||+|+||++||+
T Consensus 391 ~n~e~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~eyiS~~nh~RfyIPELLP-~LdKVLYLD~DVVVqgDLs 469 (629)
T PLN02769 391 LNIEDLILKDLDKFALKQLSLPEEFRVSFRSVDNPSSKQMRTEYLSVFSHSHFLLPEIFK-KLKKVVVLDDDVVVQRDLS 469 (629)
T ss_pred eeeeeeeecccchHHHHhhccchhhhhhhccCCCCchhccCcccccHHHHHHHHHHHHhh-hcCeEEEEeCCEEecCcHH
Confidence 332210000 0001 11 134567789999999999999 6999999999999999999
Q ss_pred HHHhcCCCCCeEEeecccccCcccccccccccchhhh-cccCCCCCcceeeeeEEEecHHHHhcChHHHHHHHHHHhcc-
Q 018535 182 KLWDVDLEGRVLAAPEYCHANFTNFFTDLFWSDRNLA-KTFDGRDPCYFNTGVMVMNVEKWRQGGYSQRVEEWMVVQKQ- 259 (354)
Q Consensus 182 eL~~~dl~g~~iAAv~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~yFNSGVmLinl~k~R~~~i~~~~~~~~~~~~~- 259 (354)
+||++||+|+++|||++|...+..+.. | +. ..+ ..+.||||+||||||+++||++++++++.+|++....
T Consensus 470 eLw~iDL~gkviAAVedc~~rl~~~~~---y----l~~~~F-~~~~CyFNSGVLLINL~~WRk~nITe~~~~~~~~~~~~ 541 (629)
T PLN02769 470 FLWNLDMGGKVNGAVQFCGVRLGQLKN---Y----LGDTNF-DTNSCAWMSGLNVIDLDKWRELDVTETYLKLLQKFSKD 541 (629)
T ss_pred HHhcCCCCCCeEEEehhhhhhhhhhhh---h----hcccCC-CccccccccCeeEeeHHHHHHhCHHHHHHHHHHHhhhc
Confidence 999999999999999998643322100 0 11 112 2457999999999999999999999999999875432
Q ss_pred -ccccCCCCccHHHHHhccceeecCcccccccCCCCccccccccCCCCCCEEEEcCCCCCCCCCCCCCCCcccccccccc
Q 018535 260 -KRIYHLGSLPPFLLVLAGNIKGVDHRWNQHGLGGDNIEGKCRNLHPGPISLLHWSGKGKPWLRLDSRKPCTVDHLWAPY 338 (354)
Q Consensus 260 -~~~~~~~DQd~LN~vf~~~i~~Lp~~wN~~~~~~~~~~~~~~~~~~~~~~IIHf~g~~KPW~~~~~~~~~~~~~lW~~y 338 (354)
...+..++|+++|++|.++++.||++||++++|++.-. ... ...+++||||+|+.|||+..... +++++|++|
T Consensus 542 ~~~~~~~~~Lp~lnlvF~g~v~~LD~rWNv~gLG~~~~i--~~~-~i~~paIIHYnG~~KPW~e~~i~---~yr~~W~kY 615 (629)
T PLN02769 542 GEESLRAAALPASLLTFQDLIYPLDDRWVLSGLGHDYGI--DEQ-AIKKAAVLHYNGNMKPWLELGIP---KYKKYWKRF 615 (629)
T ss_pred ccccccccCcCHHHHHhcCeEEECCHHHccccccccccc--ccc-ccCCcEEEEECCCCCCccCCCCC---hHHHHHHHH
Confidence 34567789999999999999999999999988764211 111 12467999999999999987543 599999999
Q ss_pred cccCCCC
Q 018535 339 DLYRPPP 345 (354)
Q Consensus 339 ~~~~~~~ 345 (354)
....+.+
T Consensus 616 l~~~~~f 622 (629)
T PLN02769 616 LNRDDRF 622 (629)
T ss_pred hccCChH
Confidence 9877654
No 14
>PLN02659 Probable galacturonosyltransferase
Probab=100.00 E-value=3.8e-43 Score=345.28 Aligned_cols=278 Identities=23% Similarity=0.481 Sum_probs=200.4
Q ss_pred CCCCcCCCCCCCCceEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcH-HHHHHHHh-hCCcceEEEEEec
Q 018535 52 APAFRNGDSCNTQTIHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEP-DVYSSINS-TFPYLNLKVYKFD 129 (354)
Q Consensus 52 ~~~~~~~~~~~~~~i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~-~~~~~L~~-~~~~~~i~~~~~~ 129 (354)
+|.++++ +-.|.|+.+| | +..+.|++.|.+.|+.+|+++.|||++|..+- .++..... .+....+++..++
T Consensus 199 ~~~l~d~-----~l~Hy~ifSd-N-vLAasVVvnStv~~a~~p~~~VFHivTD~~ny~aM~~WF~~n~~~~a~v~V~~~e 271 (534)
T PLN02659 199 VPALVDN-----SYFHFVLASD-N-ILAASVVANSLVQNALRPHKFVLHIITDRKTYSPMQAWFSLHPLSPAIIEVKALH 271 (534)
T ss_pred ccccCCC-----CcceEEEEec-c-eeEEEeeeehhhhcccCccceEEEEecCccccHHHHHHHhhCCCccceEEEEeeh
Confidence 5567777 8899999888 3 44678899999999999999999999999864 33333221 1223344444332
Q ss_pred c------ccc------c------ccc-------------ch--------hHHhhccCchhhHHHhhhhhcccccCeEEEE
Q 018535 130 S------NRV------R------GKI-------------SK--------SIRQALDQPLNYARIYLADIMPANVKRVIYL 170 (354)
Q Consensus 130 ~------~~~------~------~~i-------------s~--------~~~~~~~s~~~y~Rl~i~~llp~~~dRvLYL 170 (354)
. +.+ . ... +. ..+..+.|..+|+||+||++|| +++|||||
T Consensus 272 ~f~wl~~~~~pvl~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~ylS~~nY~RL~IPeLLP-~LdKVLYL 350 (534)
T PLN02659 272 HFDWFAKGKVPVLEAMEKDQRVRSQFRGGSSAIVANNTEKPHVIAAKLQALSPKYNSVMNHIRIHLPELFP-SLNKVVFL 350 (534)
T ss_pred hcccccccccHHHHHHhhhhhhhhhhcccccccccccccCccccccccccCCccceeHHHHHHHHHHHHhh-hcCeEEEe
Confidence 1 000 0 000 00 0123345668999999999999 69999999
Q ss_pred ecceEEeccHHHHHhcCCCCCeEEeecccccC--c---ccccccccccchhhhcccCCCCCcceeeeeEEEecHHHHhcC
Q 018535 171 DSDLVVVDDIGKLWDVDLEGRVLAAPEYCHAN--F---TNFFTDLFWSDRNLAKTFDGRDPCYFNTGVMVMNVEKWRQGG 245 (354)
Q Consensus 171 D~D~IV~~Dl~eL~~~dl~g~~iAAv~d~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~yFNSGVmLinl~k~R~~~ 245 (354)
|+|+||++||++||++||+|+++|||+||... + ..+.....+.++...+.+. .+.||||||||||||++||+++
T Consensus 351 D~DVVVqgDLseLw~iDL~gkv~AAVeDc~~~d~~~~~~~~~~yL~~s~p~i~~yFn-~~~cYfNsGVlLINLk~WRe~n 429 (534)
T PLN02659 351 DDDIVVQTDLSPLWDIDMNGKVNGAVETCRGEDKFVMSKKLKSYLNFSHPLIAKNFD-PNECAWAYGMNIFDLEAWRKTN 429 (534)
T ss_pred eCCEEEcCchHHHHhCCCCCcEEEEeeccccccchhhhHHHHHhhcccchhhhhccC-ccccceecceeEeeHHHHHhcC
Confidence 99999999999999999999999999998532 1 0110000122333333333 3578999999999999999999
Q ss_pred hHHHHHHHHHHhccccccCCCCccHH---HHHhccceeecCcccccccCCCCccccccccCCCCCCEEEEcCCCCCCCCC
Q 018535 246 YSQRVEEWMVVQKQKRIYHLGSLPPF---LLVLAGNIKGVDHRWNQHGLGGDNIEGKCRNLHPGPISLLHWSGKGKPWLR 322 (354)
Q Consensus 246 i~~~~~~~~~~~~~~~~~~~~DQd~L---N~vf~~~i~~Lp~~wN~~~~~~~~~~~~~~~~~~~~~~IIHf~g~~KPW~~ 322 (354)
+++++++|++.+.... ..+.||++| |++|.|+++.||++||+.+++++.-. .. . ..+++.||||+|+.|||+.
T Consensus 430 ITek~l~~l~~n~~~~-l~l~DQdaLp~~LivF~g~v~~LD~rWN~~gLg~~~~~-~~-~-~i~~paIIHYnG~~KPW~~ 505 (534)
T PLN02659 430 ISSTYHHWLEENLKSD-LSLWQLGTLPPGLIAFHGHVHVIDPFWHMLGLGYQENT-SL-A-DAESAGVVHFNGRAKPWLD 505 (534)
T ss_pred hHHHHHHHHHhccccc-ccccccccchHHHHHhcCCEEECChhheecCCcccccc-cc-c-ccCCcEEEEECCCCCcccc
Confidence 9999999998643222 335578887 69999999999999999887754211 11 1 2256799999999999999
Q ss_pred CCCCCCcccccccccccccCCCC
Q 018535 323 LDSRKPCTVDHLWAPYDLYRPPP 345 (354)
Q Consensus 323 ~~~~~~~~~~~lW~~y~~~~~~~ 345 (354)
.... +++.+|.+|..+.+.+
T Consensus 506 ~~~~---~yr~~W~kYl~~s~~f 525 (534)
T PLN02659 506 IAFP---QLRPLWAKYIDSSDKF 525 (534)
T ss_pred ccCC---cchhHHHHHhccCCHH
Confidence 8654 5999999999988764
No 15
>PLN02867 Probable galacturonosyltransferase
Probab=100.00 E-value=4.3e-43 Score=346.17 Aligned_cols=277 Identities=20% Similarity=0.436 Sum_probs=199.2
Q ss_pred CCCCCcCCCCCCCCceEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcH-HHHHHHHh-hCCcceEEEEEe
Q 018535 51 EAPAFRNGDSCNTQTIHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEP-DVYSSINS-TFPYLNLKVYKF 128 (354)
Q Consensus 51 ~~~~~~~~~~~~~~~i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~-~~~~~L~~-~~~~~~i~~~~~ 128 (354)
.+|.++++ +-.|.|+.+| | +..+.|++.|.+.|+..|+++.|||++|..+- .++..... .+....+++..+
T Consensus 202 ~~~~l~d~-----~~~Hy~ifSd-N-vLAasVvvnStv~~a~~p~~~VfHvvTD~~ny~aM~~WF~~n~~~~a~v~V~~~ 274 (535)
T PLN02867 202 SVSRLTDP-----SFHHVVLLTD-N-VLAASVVISSTVQNAANPEKLVFHIVTDKKTYTPMHAWFAINSIKSAVVEVKGL 274 (535)
T ss_pred hhhhccCC-----CcceEEEEec-c-eeEEEeeeehhhhcccCccceEEEEecCccccHHHHHHHhhCCCccceEEEEee
Confidence 45567776 8899999888 3 44678899999999999999999999999864 33333221 122233444333
Q ss_pred cc-ccccc------------c-----------------------cchhHHhhccCchhhHHHhhhhhcccccCeEEEEec
Q 018535 129 DS-NRVRG------------K-----------------------ISKSIRQALDQPLNYARIYLADIMPANVKRVIYLDS 172 (354)
Q Consensus 129 ~~-~~~~~------------~-----------------------is~~~~~~~~s~~~y~Rl~i~~llp~~~dRvLYLD~ 172 (354)
+. ..... + .....++.+.|.++|+||+||++|| +++||||||+
T Consensus 275 ~~f~wl~~~~~~v~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pkylS~lnYlRflIPeLLP-~LdKVLYLD~ 353 (535)
T PLN02867 275 HQYDWSQEVNVGVKEMLEIHRLIWSHYYQNLKESDFQFEGTHKRSLEALSPSCLSLLNHLRIYIPELFP-DLNKIVFLDD 353 (535)
T ss_pred hhccccccccccHHHHHHHhhhhhhhhhccccccccccccccccchhhcChhhhhHHHHHHHHHHHHhh-ccCeEEEecC
Confidence 21 00000 0 0001123456778999999999999 6999999999
Q ss_pred ceEEeccHHHHHhcCCCCCeEEeeccccc--C------cccccccccccchhhhcccCCCCCcceeeeeEEEecHHHHhc
Q 018535 173 DLVVVDDIGKLWDVDLEGRVLAAPEYCHA--N------FTNFFTDLFWSDRNLAKTFDGRDPCYFNTGVMVMNVEKWRQG 244 (354)
Q Consensus 173 D~IV~~Dl~eL~~~dl~g~~iAAv~d~~~--~------~~~~~~~~~~~~~~~~~~~~~~~~~yFNSGVmLinl~k~R~~ 244 (354)
|+||++||++||++||+|+++|||.|... . +.+|++ +++|.....+ ..+.|||||||||||+++||++
T Consensus 354 DVVVqgDLseLwdiDL~gkviaAV~D~~c~~~~~~~~~~~~YlN---fsnp~i~~~~-~p~~cYFNSGVmLINL~~WRe~ 429 (535)
T PLN02867 354 DVVVQHDLSSLWELDLNGKVVGAVVDSWCGDNCCPGRKYKDYLN---FSHPLISSNL-DQERCAWLYGMNVFDLKAWRRT 429 (535)
T ss_pred CEEEcCchHHHHhCcCCCCeEEEEeccccccccccchhhhhhcc---ccchhhhccC-CCCCcceecceeeeeHHHHHHh
Confidence 99999999999999999999999976321 1 122322 2333333333 2468999999999999999999
Q ss_pred ChHHHHHHHHHHhccccccCCCCccHHH---HHhccceeecCcccccccCCCCccccccccCCCCCCEEEEcCCCCCCCC
Q 018535 245 GYSQRVEEWMVVQKQKRIYHLGSLPPFL---LVLAGNIKGVDHRWNQHGLGGDNIEGKCRNLHPGPISLLHWSGKGKPWL 321 (354)
Q Consensus 245 ~i~~~~~~~~~~~~~~~~~~~~DQd~LN---~vf~~~i~~Lp~~wN~~~~~~~~~~~~~~~~~~~~~~IIHf~g~~KPW~ 321 (354)
++++++.+|++.+... ...+.|||.|| ++|.|+++.||++||+.++|++.- ...+. ..++++||||+|+.|||+
T Consensus 430 nITek~~~~Le~n~~~-~~~l~dqd~LN~~LlvF~g~v~~LD~rWNv~gLgy~~~-~~~~~-~i~~paIIHYnG~~KPW~ 506 (535)
T PLN02867 430 NITEAYHKWLKLSLNS-GLQLWQPGALPPALLAFKGHVHPIDPSWHVAGLGSRPP-EVPRE-ILESAAVLHFSGPAKPWL 506 (535)
T ss_pred cHHHHHHHHHHhchhc-ccccccccccchHHHHhcCcEEECChhhcccCCCcccc-cchhh-hcCCcEEEEECCCCCccc
Confidence 9999999999864332 12345788877 499999999999999988775421 11111 124679999999999999
Q ss_pred CCCCCCCcccccccccccccCCCC
Q 018535 322 RLDSRKPCTVDHLWAPYDLYRPPP 345 (354)
Q Consensus 322 ~~~~~~~~~~~~lW~~y~~~~~~~ 345 (354)
..... +++++|.+|....+.+
T Consensus 507 e~~~~---~yR~~W~kyl~~~~~f 527 (535)
T PLN02867 507 EIGFP---EVRSLWYRHVNFSDKF 527 (535)
T ss_pred ccCCC---chhHHHHHhcCccchH
Confidence 98654 5999999998877654
No 16
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=100.00 E-value=4.4e-41 Score=309.20 Aligned_cols=247 Identities=26% Similarity=0.447 Sum_probs=166.9
Q ss_pred EEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHHhhCCcc-eEE-EEEecccccccccchhHHhh
Q 018535 67 HITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTFPYL-NLK-VYKFDSNRVRGKISKSIRQA 144 (354)
Q Consensus 67 ~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~~~~~~~-~i~-~~~~~~~~~~~~is~~~~~~ 144 (354)
||++++|++|+.++.|+++||++|++.+..+.||+++++.+++..+.+++..... .+. +...+...............
T Consensus 1 ~i~~~~d~~y~~~~~v~i~Sl~~~~~~~~~~~i~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (250)
T PF01501_consen 1 HIVLACDDNYLEGAAVLIKSLLKNNPDPSNLHIYIITDDISEEDFEKLRALAAEVIEIEPIEFPDISMLEEFQFNSPSKR 80 (250)
T ss_dssp -EEEECSGGGHHHHHHHHHHHHHTTTT-SSEEEEEEESSS-HHHHHHHHHHSCCCCTTECEEETSGGHHH--TTS-HCCT
T ss_pred CEEEEeCHHHHHHHHHHHHHHHHhccccccceEEEecCCCCHHHHHHHhhhcccccceeeeccchHHhhhhhhhcccccc
Confidence 7999999999999999999999999865789999999999887777776554332 222 22222222111011112234
Q ss_pred ccCchhhHHHhhhhhcccccCeEEEEecceEEeccHHHHHhcCCCCCeEEeecccccCcccccccccccchhhhcccCCC
Q 018535 145 LDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDDIGKLWDVDLEGRVLAAPEYCHANFTNFFTDLFWSDRNLAKTFDGR 224 (354)
Q Consensus 145 ~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~Dl~eL~~~dl~g~~iAAv~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (354)
+.++.+|+||+++++++ ++|||||||+|+||.+||++||+++++|+.+||++++. +.... +............
T Consensus 81 ~~~~~~~~rl~i~~ll~-~~drilyLD~D~lv~~dl~~lf~~~~~~~~~~a~~~~~--~~~~~----~~~~~~~~~~~~~ 153 (250)
T PF01501_consen 81 HFSPATFARLFIPDLLP-DYDRILYLDADTLVLGDLDELFDLDLQGKYLAAVEDES--FDNFP----NKRFPFSERKQPG 153 (250)
T ss_dssp CGGGGGGGGGGHHHHST-TSSEEEEE-TTEEESS-SHHHHC---TTSSEEEEE------HHHH----TSTTSSEEECEST
T ss_pred cccHHHHHHhhhHHHHh-hcCeEEEEcCCeeeecChhhhhcccchhhhccccccch--hhhhh----hcccchhhcccCc
Confidence 55678999999999997 79999999999999999999999999999999998721 11111 1111111111123
Q ss_pred CCcceeeeeEEEecHHHHhcChHHHHHHHHHHhccccccCCCCccHHHHHhccceeecCcccccccCCCCccccccccCC
Q 018535 225 DPCYFNTGVMVMNVEKWRQGGYSQRVEEWMVVQKQKRIYHLGSLPPFLLVLAGNIKGVDHRWNQHGLGGDNIEGKCRNLH 304 (354)
Q Consensus 225 ~~~yFNSGVmLinl~k~R~~~i~~~~~~~~~~~~~~~~~~~~DQd~LN~vf~~~i~~Lp~~wN~~~~~~~~~~~~~~~~~ 304 (354)
..+||||||||+|+++||++++.+++.++++.... .+.++||++||.+|.+++..||.+||++..+. +....+....
T Consensus 154 ~~~~fNsGv~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~DQ~~ln~~~~~~~~~L~~~~N~~~~~~-~~~~~~~~~~ 230 (250)
T PF01501_consen 154 NKPYFNSGVMLFNPSKWRKENILQKLIEWLEQNGM--KLGFPDQDILNIVFYGNIKPLPCRYNCQPSWY-NQSDDYFNPI 230 (250)
T ss_dssp TTTSEEEEEEEEEHHHHHHHHHHHHHHHHHHHTTT--T-SSCHHHHHHHHHTTGEEEEEGGGSEEHHHH-HHTHHHHHHH
T ss_pred ccccccCcEEEEeechhhhhhhhhhhhhhhhhccc--ccCcCchHHHhhhccceeEEECchhccccccc-cccchhhHhh
Confidence 57899999999999999999999999999775322 45689999999999999999999999985432 0000111111
Q ss_pred CCCCEEEEcCCCCCCCCCC
Q 018535 305 PGPISLLHWSGKGKPWLRL 323 (354)
Q Consensus 305 ~~~~~IIHf~g~~KPW~~~ 323 (354)
.++++||||+|..|||...
T Consensus 231 ~~~~~iiHy~g~~KPW~~~ 249 (250)
T PF01501_consen 231 LEDAKIIHYSGPPKPWKST 249 (250)
T ss_dssp GCC-SEEE--SSS-TTSTT
T ss_pred cCCeEEEEeCCCCcCCCCC
Confidence 2467999999999999864
No 17
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=100.00 E-value=4.7e-38 Score=295.74 Aligned_cols=254 Identities=15% Similarity=0.284 Sum_probs=172.1
Q ss_pred eEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCC-CcHHHHHHHHhh---CC-cceEEEEEecccccccccchh
Q 018535 66 IHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSN-FEPDVYSSINST---FP-YLNLKVYKFDSNRVRGKISKS 140 (354)
Q Consensus 66 i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~-~s~~~~~~L~~~---~~-~~~i~~~~~~~~~~~~~is~~ 140 (354)
|||++.+.++++..+.++|+|++.|+. ..++|||++++ .+++.++.++++ +. .+..+++.+.- ...+.+
T Consensus 1 ~~~~vv~~g~~~~~~~~~lkSil~~n~--~~l~Fhi~~d~~~~~~~~~~l~~~~~~~~~~i~~~i~~I~~--P~~~~~-- 74 (304)
T cd06430 1 MHLAVVACGERLEETLTMLKSAIVFSQ--KPLRFHIFAEDQLKQSFKEKLDDWPELIDRKFNYTLHPITF--PSGNAA-- 74 (304)
T ss_pred CEEEEEEcCCcHHHHHHHHHHHHHhCC--CCEEEEEEECCccCHHHHHHHHHHHHhccceeeeEEEEEec--Cccchh--
Confidence 467755544558999999999999985 57999999998 566666656554 21 22235555521 111111
Q ss_pred HHhhccCchhhHHHhhhhhcccccCeEEEEecceEEeccHHHHHhc--CCCCC-eEEeecccccCcccccccccccchhh
Q 018535 141 IRQALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDDIGKLWDV--DLEGR-VLAAPEYCHANFTNFFTDLFWSDRNL 217 (354)
Q Consensus 141 ~~~~~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~Dl~eL~~~--dl~g~-~iAAv~d~~~~~~~~~~~~~~~~~~~ 217 (354)
....+.+|.+|+||++|++|| ++|||||||+|+||++||++||++ ++++. ++|++++.......++ ....
T Consensus 75 ~ws~l~~~~~y~RL~ip~lLp-~~dkvLYLD~Dii~~~dI~eL~~~~~df~~~~~aA~v~e~~~~~~~~~------~~~~ 147 (304)
T cd06430 75 EWKKLFKPCAAQRLFLPSLLP-DVDSLLYVDTDILFLRPVEEIWSFLKKFNSTQLAAMAPEHEEPNIGWY------NRFA 147 (304)
T ss_pred hhhhcccHHHHHHHHHHHHhh-hhceEEEeccceeecCCHHHHHHHHhhcCCCeEEEEEecccccchhhh------hhhc
Confidence 123455678999999999999 799999999999999999999999 89886 4445443211101121 1101
Q ss_pred hcccCCCCCcceeeeeEEEecHHHHh-----------cChHHHHHHHHHHhccccccCCCCccHHHHHhccc---eeecC
Q 018535 218 AKTFDGRDPCYFNTGVMVMNVEKWRQ-----------GGYSQRVEEWMVVQKQKRIYHLGSLPPFLLVLAGN---IKGVD 283 (354)
Q Consensus 218 ~~~~~~~~~~yFNSGVmLinl~k~R~-----------~~i~~~~~~~~~~~~~~~~~~~~DQd~LN~vf~~~---i~~Lp 283 (354)
...+ .+..|||||||||||++||+ .+++++++++++..+ ....++|||+||++|.++ ++.||
T Consensus 148 ~~~~--~~~~gFNSGVmLmNL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~DQDiLN~v~~~~p~~~~~Lp 223 (304)
T cd06430 148 RHPY--YGKTGVNSGVMLMNLTRMRRKYFKNDMTPVGLRWEEILMPLYKKYK--LKITWGDQDLINIIFHHNPEMLYVFP 223 (304)
T ss_pred ccCc--ccccccccceeeeeHHHHHhhhcccccchhhhhHHHHHHHHHHhcc--cCCCCCCHHHHHHHHcCCCCeEEEcC
Confidence 1111 12357999999999999999 678999999887533 234589999999999998 99999
Q ss_pred cccccccCCCCccccccccCCCCCCEEEEcCCCCCCCCCCCCCCCcccccccccccccC
Q 018535 284 HRWNQHGLGGDNIEGKCRNLHPGPISLLHWSGKGKPWLRLDSRKPCTVDHLWAPYDLYR 342 (354)
Q Consensus 284 ~~wN~~~~~~~~~~~~~~~~~~~~~~IIHf~g~~KPW~~~~~~~~~~~~~lW~~y~~~~ 342 (354)
++||++.... .....|...+.+.++||||+++.| +... .| .++.++..+..+.
T Consensus 224 ~~wN~~~d~~-~y~~~~~~~~~~~~~~~H~n~~~~--~~~~--~~-~f~~~~~~~~~~~ 276 (304)
T cd06430 224 CHWNYRPDHC-MYGSNCKAAEEEGVFILHGNRGVY--HSDK--QP-AFRAVYEAIREYT 276 (304)
T ss_pred ccccCCccce-eecccccccccccceEEEcCCCCC--CCcc--ch-HHHHHHHHHHhcc
Confidence 9999875221 011234333446789999998666 3222 22 4666666555544
No 18
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=100.00 E-value=6.5e-38 Score=290.63 Aligned_cols=231 Identities=16% Similarity=0.255 Sum_probs=165.9
Q ss_pred eEEEEE-eCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHHh---hCCcceEEEEEec-ccccccccchh
Q 018535 66 IHITMT-LDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINS---TFPYLNLKVYKFD-SNRVRGKISKS 140 (354)
Q Consensus 66 i~I~~~-~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~~---~~~~~~i~~~~~~-~~~~~~~is~~ 140 (354)
|||+.+ +|+.|+++++|++.||++|+. ..++|||++++++++.++.|++ .+ +.+++++.++ +..+......
T Consensus 1 ini~~~~~~~~y~~~~~v~l~Sll~nn~--~~~~fyil~~~is~e~~~~l~~~~~~~-~~~i~~i~i~~~~~~~~~~~~- 76 (248)
T cd06432 1 INIFSVASGHLYERFLRIMMLSVMKNTK--SPVKFWFIKNFLSPQFKEFLPEMAKEY-GFEYELVTYKWPRWLHKQTEK- 76 (248)
T ss_pred CeEEEEcCcHHHHHHHHHHHHHHHHcCC--CCEEEEEEeCCCCHHHHHHHHHHHHHh-CCceEEEEecChhhhhccccc-
Confidence 577754 557899999999999999985 5799999999999865555543 34 3477888876 2322211111
Q ss_pred HHhhccCchhhHHHhhhhhcccccCeEEEEecceEEeccHHHHHhcCCCCCeEEeecccccCcccccccccccchhhhcc
Q 018535 141 IRQALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDDIGKLWDVDLEGRVLAAPEYCHANFTNFFTDLFWSDRNLAKT 220 (354)
Q Consensus 141 ~~~~~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~Dl~eL~~~dl~g~~iAAv~d~~~~~~~~~~~~~~~~~~~~~~ 220 (354)
. ....+|+|++++++||++++||||||+|+||.+||++||++|++|+++||+++|.... .......|........
T Consensus 77 ~----~~~~~y~rL~~~~lLP~~vdkvLYLD~Dilv~~dL~eL~~~dl~~~~~Aav~d~~~~~-~~~~~~~~~~~~~~~~ 151 (248)
T cd06432 77 Q----RIIWGYKILFLDVLFPLNVDKVIFVDADQIVRTDLKELMDMDLKGAPYGYTPFCDSRK-EMDGFRFWKQGYWKSH 151 (248)
T ss_pred c----hhHHHHHHHHHHHhhhhccCEEEEEcCCceecccHHHHHhcCcCCCeEEEeeccccch-hcccchhhhhhhhhhh
Confidence 0 0124799999999999889999999999999999999999999999999999875321 0000011211100111
Q ss_pred cCCCCCcceeeeeEEEecHHHHhcChHHHHHHHHHHhc-cccccCCCCccHHHHHhccc-eeecCcccccccCC-CCccc
Q 018535 221 FDGRDPCYFNTGVMVMNVEKWRQGGYSQRVEEWMVVQK-QKRIYHLGSLPPFLLVLAGN-IKGVDHRWNQHGLG-GDNIE 297 (354)
Q Consensus 221 ~~~~~~~yFNSGVmLinl~k~R~~~i~~~~~~~~~~~~-~~~~~~~~DQd~LN~vf~~~-i~~Lp~~wN~~~~~-~~~~~ 297 (354)
+ +...|||||||||||++||++++++++.++++... ....+.+.|||+||.++.++ ++.||++||++... .+.
T Consensus 152 l--~~~~YfNSGVmliNL~~wR~~~i~~~~~~~~~~l~~~~~~l~~~DQDiLN~v~~~~~i~~Lp~~w~~~~~~~~~~-- 227 (248)
T cd06432 152 L--RGRPYHISALYVVDLKRFRRIAAGDRLRGQYQQLSQDPNSLANLDQDLPNNMQHQVPIFSLPQEWLWCETWCSDE-- 227 (248)
T ss_pred c--CCCCccceeeEEEeHHHHHHHhHHHHHHHHHHHHhcCCCccccCCchhhHHHhccCCeEECChHHHHHHHHhccc--
Confidence 2 23459999999999999999999998777665322 22335578999999999886 99999999986422 121
Q ss_pred cccccCCCCCCEEEEcCC
Q 018535 298 GKCRNLHPGPISLLHWSG 315 (354)
Q Consensus 298 ~~~~~~~~~~~~IIHf~g 315 (354)
....+.+|||..
T Consensus 228 ------~~~~~~~~~~~~ 239 (248)
T cd06432 228 ------SKKKAKTIDLCN 239 (248)
T ss_pred ------ccCccceeeccc
Confidence 124568999975
No 19
>PLN00176 galactinol synthase
Probab=100.00 E-value=7.3e-32 Score=257.38 Aligned_cols=237 Identities=14% Similarity=0.187 Sum_probs=151.3
Q ss_pred eEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHHhhCCcceEEEEEecccccccccchhHHhhc
Q 018535 66 IHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTFPYLNLKVYKFDSNRVRGKISKSIRQAL 145 (354)
Q Consensus 66 i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~~~~~~~~i~~~~~~~~~~~~~is~~~~~~~ 145 (354)
.-.++++|++|+.|+.++.+||+++.+. ..+. .+++.+++++.++.|++.+..+ +.+..+.+..-...+.. ..
T Consensus 25 yVT~L~~n~~Y~~Ga~vL~~SLr~~~s~-~~lV-vlVt~dVp~e~r~~L~~~g~~V-~~V~~i~~~~~~~~~~~---~~- 97 (333)
T PLN00176 25 YVTFLAGNGDYVKGVVGLAKGLRKVKSA-YPLV-VAVLPDVPEEHRRILVSQGCIV-REIEPVYPPENQTQFAM---AY- 97 (333)
T ss_pred EEEEEecCcchHHHHHHHHHHHHHhCCC-CCEE-EEECCCCCHHHHHHHHHcCCEE-EEecccCCccccccccc---ch-
Confidence 4444678899999999999999998653 3332 3355788888778887543211 11222211100001110 00
Q ss_pred cCchhhHHHhhhhhcccccCeEEEEecceEEeccHHHHHhcCCCCCeEEeecccccCccccccccccc-----ch-h--h
Q 018535 146 DQPLNYARIYLADIMPANVKRVIYLDSDLVVVDDIGKLWDVDLEGRVLAAPEYCHANFTNFFTDLFWS-----DR-N--L 217 (354)
Q Consensus 146 ~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~Dl~eL~~~dl~g~~iAAv~d~~~~~~~~~~~~~~~-----~~-~--~ 217 (354)
-..+|.||.++++. +++||||||+|+||++||++||+++ .| .+|||.||..+...-..+.+|- .+ . .
T Consensus 98 -~~i~~tKl~iw~l~--~ydkvlyLDaD~lv~~nid~Lf~~~-~~-~~aAV~dc~~~~~~~~~p~~~~~~c~~~~~~~~w 172 (333)
T PLN00176 98 -YVINYSKLRIWEFV--EYSKMIYLDGDIQVFENIDHLFDLP-DG-YFYAVMDCFCEKTWSHTPQYKIGYCQQCPDKVTW 172 (333)
T ss_pred -hhhhhhhhhhcccc--ccceEEEecCCEEeecChHHHhcCC-Cc-ceEEEecccccccccccccccccccccchhhccc
Confidence 12479999999987 5999999999999999999999884 23 5788888754321000000000 00 0 0
Q ss_pred hcccCCCCCcceeeeeEEEecHHHHhcChHHHHHHHHHHhccccccCCCCccHHHHHhccceeecCcccccccCCCCccc
Q 018535 218 AKTFDGRDPCYFNTGVMVMNVEKWRQGGYSQRVEEWMVVQKQKRIYHLGSLPPFLLVLAGNIKGVDHRWNQHGLGGDNIE 297 (354)
Q Consensus 218 ~~~~~~~~~~yFNSGVmLinl~k~R~~~i~~~~~~~~~~~~~~~~~~~~DQd~LN~vf~~~i~~Lp~~wN~~~~~~~~~~ 297 (354)
....+.++..||||||||+|+++|+.++ ++++++... . ..++|||+||.+|.++++.||.+||++.......+
T Consensus 173 p~~~g~~~~~yFNSGVlvinps~~~~~~----ll~~l~~~~--~-~~f~DQD~LN~~F~~~~~~Lp~~YN~~~~~~~~~~ 245 (333)
T PLN00176 173 PAELGPPPPLYFNAGMFVFEPSLSTYED----LLETLKITP--P-TPFAEQDFLNMFFRDIYKPIPPVYNLVLAMLWRHP 245 (333)
T ss_pred hhhccCCCCCeEEeEEEEEEcCHHHHHH----HHHHHHhcC--C-CCCCCHHHHHHHHcCcEEECCchhcCchhhhhhCh
Confidence 0111223467999999999999998754 455555322 2 35799999999999999999999998742111111
Q ss_pred cccccCCCCCCEEEEcCC-CCCCCCCCC
Q 018535 298 GKCRNLHPGPISLLHWSG-KGKPWLRLD 324 (354)
Q Consensus 298 ~~~~~~~~~~~~IIHf~g-~~KPW~~~~ 324 (354)
.. ...++++||||+| ..|||+...
T Consensus 246 ~~---~~~~~vkIIHY~~~~~KPW~~~~ 270 (333)
T PLN00176 246 EN---VELDKVKVVHYCAAGSKPWRYTG 270 (333)
T ss_pred hh---cccCCcEEEEeeCCCCCCCCCCC
Confidence 11 1235789999996 579998653
No 20
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.
Probab=99.97 E-value=3.8e-31 Score=244.63 Aligned_cols=211 Identities=17% Similarity=0.236 Sum_probs=147.2
Q ss_pred EEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeC-CCcHHHHHHHHhhCCcceEEEEEecccccccccchhHHhhccC
Q 018535 69 TMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYS-NFEPDVYSSINSTFPYLNLKVYKFDSNRVRGKISKSIRQALDQ 147 (354)
Q Consensus 69 ~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~-~~s~~~~~~L~~~~~~~~i~~~~~~~~~~~~~is~~~~~~~~s 147 (354)
.+++|++|+.++.++++||++|++. +.++++.+ +++++.++.|++.... -+.+..++........ .....
T Consensus 5 t~~~~~~Y~~~a~vl~~SL~~~~~~---~~~~vl~~~~is~~~~~~L~~~~~~-~~~v~~i~~~~~~~~~-----~~~~~ 75 (240)
T cd02537 5 TLLTNDDYLPGALVLGYSLRKVGSS---YDLVVLVTPGVSEESREALEEVGWI-VREVEPIDPPDSANLL-----KRPRF 75 (240)
T ss_pred EEecChhHHHHHHHHHHHHHhcCCC---CCEEEEECCCCCHHHHHHHHHcCCE-EEecCccCCcchhhhc-----cchHH
Confidence 4678889999999999999999863 45666554 6888777778764321 1112222211110000 11223
Q ss_pred chhhHHHhhhhhcccccCeEEEEecceEEeccHHHHHhcCCCCCeEEeecccccCcccccccccccchhhhcccCCCCCc
Q 018535 148 PLNYARIYLADIMPANVKRVIYLDSDLVVVDDIGKLWDVDLEGRVLAAPEYCHANFTNFFTDLFWSDRNLAKTFDGRDPC 227 (354)
Q Consensus 148 ~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~Dl~eL~~~dl~g~~iAAv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (354)
..+|.||+++++. +++||||||+|++|++||++||++ +..+||+.++. ...
T Consensus 76 ~~~~~kl~~~~l~--~~drvlylD~D~~v~~~i~~Lf~~---~~~~~a~~d~~------------------------~~~ 126 (240)
T cd02537 76 KDTYTKLRLWNLT--EYDKVVFLDADTLVLRNIDELFDL---PGEFAAAPDCG------------------------WPD 126 (240)
T ss_pred HHHhHHHHhcccc--ccceEEEEeCCeeEccCHHHHhCC---CCceeeecccC------------------------ccc
Confidence 4589999999975 599999999999999999999988 45677765431 035
Q ss_pred ceeeeeEEEecHHHHhcChHHHHHHHHHHhccccccCCCCccHHHHHhccc--eeecCcccccccCCCCccccccccCCC
Q 018535 228 YFNTGVMVMNVEKWRQGGYSQRVEEWMVVQKQKRIYHLGSLPPFLLVLAGN--IKGVDHRWNQHGLGGDNIEGKCRNLHP 305 (354)
Q Consensus 228 yFNSGVmLinl~k~R~~~i~~~~~~~~~~~~~~~~~~~~DQd~LN~vf~~~--i~~Lp~~wN~~~~~~~~~~~~~~~~~~ 305 (354)
|||||||++|+++ +..+++++++.... . +..+||++||.+|+++ +..||++||++......... ... ..
T Consensus 127 ~fNsGv~l~~~~~----~~~~~~~~~~~~~~--~-~~~~DQdiLN~~~~~~~~~~~l~~~yN~~~~~~~~~~~-~~~-~~ 197 (240)
T cd02537 127 LFNSGVFVLKPSE----ETFNDLLDALQDTP--S-FDGGDQGLLNSYFSDRGIWKRLPFTYNALKPLRYLHPE-ALW-FG 197 (240)
T ss_pred cccceEEEEcCCH----HHHHHHHHHHhccC--C-CCCCCHHHHHHHHcCCCCEeECCcceeeehhhhccCch-hhc-cc
Confidence 9999999999964 35567777776432 2 5678999999999999 99999999987432221111 001 12
Q ss_pred CCCEEEEcCCCCCCCCCCCCC
Q 018535 306 GPISLLHWSGKGKPWLRLDSR 326 (354)
Q Consensus 306 ~~~~IIHf~g~~KPW~~~~~~ 326 (354)
++++||||+|+.|||+.....
T Consensus 198 ~~~~iiHf~g~~KPW~~~~~~ 218 (240)
T cd02537 198 DEIKVVHFIGGDKPWSWWRDP 218 (240)
T ss_pred CCcEEEEEeCCCCCCCCCcCC
Confidence 467999999999999876543
No 21
>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases.
Probab=99.92 E-value=1e-24 Score=203.94 Aligned_cols=212 Identities=13% Similarity=0.096 Sum_probs=139.2
Q ss_pred EEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHHh---hCCcceEEEEEecccccccccchhHHhhc
Q 018535 69 TMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINS---TFPYLNLKVYKFDSNRVRGKISKSIRQAL 145 (354)
Q Consensus 69 ~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~~---~~~~~~i~~~~~~~~~~~~~is~~~~~~~ 145 (354)
-+++++.|+.++.++.+||.++.+. .. .+.+++++.+......+.. ......+.+..++.....+ . ...
T Consensus 5 tl~Tn~~YL~gAlvL~~sLr~~gs~-~d-lVvLvt~~~~~~~~~~~~~~~~~l~~~~~~v~~v~~~~~~~--~----~~~ 76 (278)
T cd06914 5 NYATNADYLCNALILFEQLRRLGSK-AK-LVLLVPETLLDRNLDDFVRRDLLLARDKVIVKLIPVIIASG--G----DAY 76 (278)
T ss_pred EEecChhHHHHHHHHHHHHHHhCCC-CC-EEEEECCCCChhhhhhHHHHHHHhhccCcEEEEcCcccCCC--C----Ccc
Confidence 3567899999999999999998873 22 2233455555421111100 0011233444444221111 0 011
Q ss_pred cCchhhHHHhhhhhcccccCeEEEEecceEEeccHHHHHhcCCCCCeEEeecccccCcccccccccccchhhhcccCCCC
Q 018535 146 DQPLNYARIYLADIMPANVKRVIYLDSDLVVVDDIGKLWDVDLEGRVLAAPEYCHANFTNFFTDLFWSDRNLAKTFDGRD 225 (354)
Q Consensus 146 ~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~Dl~eL~~~dl~g~~iAAv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (354)
+ ..+|.||.++++. +++||||||+|++|+++|++||+++.. ..+||+..
T Consensus 77 ~-~~~~tKl~~~~l~--~y~kvlyLDaD~l~~~~ideLf~~~~~-~~~Aap~~--------------------------- 125 (278)
T cd06914 77 W-AKSLTKLRAFNQT--EYDRIIYFDSDSIIRHPMDELFFLPNY-IKFAAPRA--------------------------- 125 (278)
T ss_pred H-HHHHHHHHhcccc--ceeeEEEecCChhhhcChHHHhcCCcc-cceeeecC---------------------------
Confidence 1 1369999999984 699999999999999999999998733 33566531
Q ss_pred CcceeeeeEEEecHHHHhcChHHHHHHHHHHhccccccCCCCccHHHHHhccc-------eeecCcc-cccccCCCCcc-
Q 018535 226 PCYFNTGVMVMNVEKWRQGGYSQRVEEWMVVQKQKRIYHLGSLPPFLLVLAGN-------IKGVDHR-WNQHGLGGDNI- 296 (354)
Q Consensus 226 ~~yFNSGVmLinl~k~R~~~i~~~~~~~~~~~~~~~~~~~~DQd~LN~vf~~~-------i~~Lp~~-wN~~~~~~~~~- 296 (354)
..||||||||||+++|+.+++.+++.+.... + ...+|||+||.+|.++ +..||++ ||.........
T Consensus 126 ~~~FNSGvmvi~ps~~~~~~l~~~~~~~~~~--~---~~~~DQdiLN~~~~~~~~~~~~~~~~Lp~~~y~llt~~~r~~~ 200 (278)
T cd06914 126 YWKFASHLMVIKPSKEAFKELMTEILPAYLN--K---KNEYDMDLINEEFYNSKQLFKPSVLVLPHRQYGLLTGEFREKL 200 (278)
T ss_pred cceecceeEEEeCCHHHHHHHHHHHHHhccc--C---CCCCChHHHHHHHhCCccccCcceEEcCccccccCChhhcccC
Confidence 1299999999999999998888887765432 1 1467999999999999 9999997 99764211100
Q ss_pred ----ccc----cccCC----CCCCEEEEcCCC--CCCCCCCC
Q 018535 297 ----EGK----CRNLH----PGPISLLHWSGK--GKPWLRLD 324 (354)
Q Consensus 297 ----~~~----~~~~~----~~~~~IIHf~g~--~KPW~~~~ 324 (354)
-+. ..... -.++++|||++. .|||....
T Consensus 201 ~~~~l~~~~~~~~~w~~~~~~~~~k~vHFSd~Pl~KPW~~~~ 242 (278)
T cd06914 201 HKSFLSNAQHLYEKWDPDDVFKESKVIHFSDSPLPKPWNYNN 242 (278)
T ss_pred HHHhhccccccccccCHHHHHhhCeEEEecCCCCCCCcCCcC
Confidence 000 00000 135799999986 79998753
No 22
>KOG1879 consensus UDP-glucose:glycoprotein glucosyltransferase [Carbohydrate transport and metabolism]
Probab=99.59 E-value=4.6e-15 Score=156.76 Aligned_cols=257 Identities=20% Similarity=0.305 Sum_probs=173.1
Q ss_pred CceEEEE-EeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHHhhCCcceEEEEEecccccccccchhHH
Q 018535 64 QTIHITM-TLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTFPYLNLKVYKFDSNRVRGKISKSIR 142 (354)
Q Consensus 64 ~~i~I~~-~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~~~~~~~~i~~~~~~~~~~~~~is~~~~ 142 (354)
+.|||+- ++..-|.+.+..++.|+++|++.| +.|+++-..+|+.+++.+...-...++++..+. -+++...+
T Consensus 1180 ~vINIFSvASGHLYERflrIMm~SvlknTktp--VKFWfLkNyLSPtFKe~iP~mA~eYnFeyElv~-----YkWPrWLh 1252 (1470)
T KOG1879|consen 1180 EVINIFSVASGHLYERFLRIMMLSVLKNTKTP--VKFWFLKNYLSPTFKESIPHMAKEYNFEYELVQ-----YKWPRWLH 1252 (1470)
T ss_pred ceEEEEeeccccHHHHHHHHHHHHHHhCCCCc--eeEEeehhhcChHHHHHHHHHHHHhCceEEEEE-----ecCchhhh
Confidence 4799994 555669999999999999999854 999999999998766655422111123333222 22222222
Q ss_pred hhc---cCchhhHHHhhhhhcccccCeEEEEecceEEeccHHHHHhcCCCCCeEEeecccccCc-ccccccccccchhhh
Q 018535 143 QAL---DQPLNYARIYLADIMPANVKRVIYLDSDLVVVDDIGKLWDVDLEGRVLAAPEYCHANF-TNFFTDLFWSDRNLA 218 (354)
Q Consensus 143 ~~~---~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~Dl~eL~~~dl~g~~iAAv~d~~~~~-~~~~~~~~~~~~~~~ 218 (354)
+.. .....|--||+.-+||.+++||||.|+|.||+.||.||.++|++|.+.|=+..|..+. .+-| .||+...++
T Consensus 1253 qQ~EKQRiiWgyKILFLDVLFPL~v~KvIfVDADQIVR~DL~EL~dfdl~GaPygYtPfCdsR~EMDGy--RFWK~GYW~ 1330 (1470)
T KOG1879|consen 1253 QQTEKQRIIWGYKILFLDVLFPLNVDKVIFVDADQIVRADLKELMDFDLGGAPYGYTPFCDSRREMDGY--RFWKQGYWK 1330 (1470)
T ss_pred hhhhhhhhhhhhhhhhhhhccccccceEEEEcchHhhhhhhHHHHhcccCCCccccCccccccccccch--hHHhhhHHH
Confidence 110 1135788889999999999999999999999999999999999999999777776432 1211 368765555
Q ss_pred cccCCCCCcceeeeeEEEecHHHHhcChHHHHHHHHHHh--ccccccCCCCccHHH-HHhccceeecCcccccccCCCCc
Q 018535 219 KTFDGRDPCYFNTGVMVMNVEKWRQGGYSQRVEEWMVVQ--KQKRIYHLGSLPPFL-LVLAGNIKGVDHRWNQHGLGGDN 295 (354)
Q Consensus 219 ~~~~~~~~~yFNSGVmLinl~k~R~~~i~~~~~~~~~~~--~~~~~~~~~DQd~LN-~vf~~~i~~Lp~~wN~~~~~~~~ 295 (354)
+.+.| ..|-=|...|+||+|.|+..-.+++.-..+.. ..+.+-++ |||.-| +...-.|+.||..|=+...+.+.
T Consensus 1331 ~hL~g--rkYHISALYVVDLkrFReiaAGDrLR~qYQ~LS~DPNSLsNL-DQDLPNnm~hqVpIkSLPqeWLWCETWC~d 1407 (1470)
T KOG1879|consen 1331 KHLRG--RKYHISALYVVDLKRFREIAAGDRLRGQYQALSQDPNSLSNL-DQDLPNNMQHQVPIKSLPQEWLWCETWCDD 1407 (1470)
T ss_pred HHhcc--CccccceeeeeeHHHHHhcccchHHHHHHHhhcCCcchhhhc-cccccccceeecccccCCcchhhhhhhcCc
Confidence 55544 67999999999999999999888877544322 12344333 688655 45667899999998776544332
Q ss_pred cccccccCCCCCCEEEEcCCCCCCCCCCCC-CCCccccccccccccc
Q 018535 296 IEGKCRNLHPGPISLLHWSGKGKPWLRLDS-RKPCTVDHLWAPYDLY 341 (354)
Q Consensus 296 ~~~~~~~~~~~~~~IIHf~g~~KPW~~~~~-~~~~~~~~lW~~y~~~ 341 (354)
-....+++|--+. .||....- ...--.-..|..|+..
T Consensus 1408 -------~skkkAktIDLCn--NP~TKEpKL~~A~Riv~EW~dyD~E 1445 (1470)
T KOG1879|consen 1408 -------ESKKKAKTIDLCN--NPLTKEPKLDAARRIVSEWTDYDAE 1445 (1470)
T ss_pred -------hhhhhchhhhhhc--CccccchhhHHHhhhcCCCcccchH
Confidence 1123456777764 47765310 0000134667777754
No 23
>COG5597 Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=98.87 E-value=2.9e-10 Score=105.42 Aligned_cols=168 Identities=24% Similarity=0.389 Sum_probs=97.9
Q ss_pred hhhHHHhhhhhcccccCeEEEEecceEEeccHHHHHhcCCCCCeEEeeccccc---Ccc------cc-cccc--------
Q 018535 149 LNYARIYLADIMPANVKRVIYLDSDLVVVDDIGKLWDVDLEGRVLAAPEYCHA---NFT------NF-FTDL-------- 210 (354)
Q Consensus 149 ~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~Dl~eL~~~dl~g~~iAAv~d~~~---~~~------~~-~~~~-------- 210 (354)
..+.||.+.++. ++|||+|||+|.||++++++||+.. -+-.+|..|... .|. .+ |++.
T Consensus 155 ~mftKLrVfeqt--EyDRvifLDsDaivlknmDklFd~P--vyef~a~pD~~~sp~~fhrp~~~i~~~ft~~faayg~~r 230 (368)
T COG5597 155 DMFTKLRVFEQT--EYDRVIFLDSDAIVLKNMDKLFDYP--VYEFAAAPDVYESPADFHRPNSGIFVSFTPAFAAYGKMR 230 (368)
T ss_pred HHhHHHHhhhhh--hhceEEEeccchHHhhhhHHHhcch--hhhhccCCchhhCHHHhcCCCCccceeecHHHHhhcccH
Confidence 478899999987 5999999999999999999999876 122222211100 000 00 1111
Q ss_pred --------cccc--hhhhcccCCCCCcceeeeeEEEecHHHHhcChHHHHHHHHHHhccccccC---CCCccHHHHHhc-
Q 018535 211 --------FWSD--RNLAKTFDGRDPCYFNTGVMVMNVEKWRQGGYSQRVEEWMVVQKQKRIYH---LGSLPPFLLVLA- 276 (354)
Q Consensus 211 --------~~~~--~~~~~~~~~~~~~yFNSGVmLinl~k~R~~~i~~~~~~~~~~~~~~~~~~---~~DQd~LN~vf~- 276 (354)
+|.. +.........-..+||||.|+++..++.-. ++..++ . ..+|+ .-.|.++|+.++
T Consensus 231 ~~ly~Pylf~a~~dq~~~hstpP~fk~~FnagLmv~~Psk~hm~----riv~~a-l---Pklydda~mmeqsllnlaYn~ 302 (368)
T COG5597 231 AALYAPYLFWARTDQTFLHSTPPDFKLKFNAGLMVGLPSKMHML----RIVWFA-L---PKLYDDADMMEQSLLNLAYNY 302 (368)
T ss_pred hhhccccccccccCCcccccCCCcHhhhhccCceeecchHHHHH----HHHHHh-h---HHhhhhhhHHHHHHHHHHHhh
Confidence 1110 000000001114589999999999987643 332222 1 12333 124667887754
Q ss_pred -c--ceeecCcccccccCCCCccccccccCCCCCCEEEEcCCCCCCCCCCCCCCCccccccccccccc
Q 018535 277 -G--NIKGVDHRWNQHGLGGDNIEGKCRNLHPGPISLLHWSGKGKPWLRLDSRKPCTVDHLWAPYDLY 341 (354)
Q Consensus 277 -~--~i~~Lp~~wN~~~~~~~~~~~~~~~~~~~~~~IIHf~g~~KPW~~~~~~~~~~~~~lW~~y~~~ 341 (354)
| -|..++.+|| |.+-+. . ++ | -.+.+|+ |||...+..-||.....|++=...
T Consensus 303 ~g~FPwerld~~yN--G~wa~~--n---dl-P-ylka~Hg----K~W~y~g~~fp~i~~~ew~~daf~ 357 (368)
T COG5597 303 EGFFPWERLDPRYN--GYWADA--N---DL-P-YLKAWHG----KPWFYTGEQFPDIAGLEWPQDAFT 357 (368)
T ss_pred hccCchhhcCcccc--cccccc--c---cc-c-hHHHhhc----CcCCCCcccChhhhcCcChhhhhh
Confidence 2 5788899998 332111 0 01 1 1245665 999999888889999999854433
No 24
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [].
Probab=97.42 E-value=0.00079 Score=60.72 Aligned_cols=139 Identities=14% Similarity=0.118 Sum_probs=73.6
Q ss_pred hhHHH-hhhhhcccccCeEEEEecceEEeccHHHHHhcCCCCCeEEeecccccCcccccccccccchhhhcccCCCCCcc
Q 018535 150 NYARI-YLADIMPANVKRVIYLDSDLVVVDDIGKLWDVDLEGRVLAAPEYCHANFTNFFTDLFWSDRNLAKTFDGRDPCY 228 (354)
Q Consensus 150 ~y~Rl-~i~~llp~~~dRvLYLD~D~IV~~Dl~eL~~~dl~g~~iAAv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 228 (354)
...|. ++-+++...+ .|+|+|+|++..+|..++++. .+.-+.+..|+.... . . ......
T Consensus 52 ~~~K~~~~~~~L~~G~-~vl~~D~Dvv~~~dp~~~~~~--~~~Di~~~~d~~~~~------------~----~-~~~~~~ 111 (212)
T PF03407_consen 52 TWLKPKVLLDLLELGY-DVLFSDADVVWLRDPLPYFEN--PDADILFSSDGWDGT------------N----S-DRNGNL 111 (212)
T ss_pred HHHHHHHHHHHHHcCC-ceEEecCCEEEecCcHHhhcc--CCCceEEecCCCccc------------c----h-hhcCCc
Confidence 33444 2445665444 599999999999999999921 333333333432110 0 0 012345
Q ss_pred eeeeeEEEecHHHHhcChHHH-HHHHHHHhccccccCCCCccHHHHHhccc--------eeecCcccccccCCCCccccc
Q 018535 229 FNTGVMVMNVEKWRQGGYSQR-VEEWMVVQKQKRIYHLGSLPPFLLVLAGN--------IKGVDHRWNQHGLGGDNIEGK 299 (354)
Q Consensus 229 FNSGVmLinl~k~R~~~i~~~-~~~~~~~~~~~~~~~~~DQd~LN~vf~~~--------i~~Lp~~wN~~~~~~~~~~~~ 299 (354)
+|+|+|.+.... -+.+ +.+|....... -...||.+||.++... +..||...-..+.++-.....
T Consensus 112 ~n~G~~~~r~t~-----~~~~~~~~w~~~~~~~--~~~~DQ~~~n~~l~~~~~~~~~~~~~~L~~~~f~~g~~~f~~~~~ 184 (212)
T PF03407_consen 112 VNTGFYYFRPTP-----RTIAFLEDWLERMAES--PGCWDQQAFNELLREQAARYGGLRVRFLPPSLFPNGHGYFCQSRD 184 (212)
T ss_pred cccceEEEecCH-----HHHHHHHHHHHHHHhC--CCcchHHHHHHHHHhcccCCcCcEEEEeCHHHeeccccceeecch
Confidence 699999995554 2222 33455432221 1234999999887653 456666544222111100001
Q ss_pred cccCC-CCCCEEEEcCC
Q 018535 300 CRNLH-PGPISLLHWSG 315 (354)
Q Consensus 300 ~~~~~-~~~~~IIHf~g 315 (354)
..... ..++.+||.++
T Consensus 185 ~~~~~~~~~p~~vH~n~ 201 (212)
T PF03407_consen 185 WAWVPTKNKPYIVHANC 201 (212)
T ss_pred hhhhccccccceEEEcC
Confidence 11111 13578999986
No 25
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose. It is implicated in late Golgi modifications [][][]. The proteins matching this entry are conserved in fungi and also found in some phototrophic organisms.; GO: 0006486 protein glycosylation
Probab=97.38 E-value=0.00073 Score=63.73 Aligned_cols=110 Identities=16% Similarity=0.216 Sum_probs=66.1
Q ss_pred EEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEe-CCCcHHHHHHHHhhCCcceEEEEEecccccccccchhHHhhcc
Q 018535 68 ITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLY-SNFEPDVYSSINSTFPYLNLKVYKFDSNRVRGKISKSIRQALD 146 (354)
Q Consensus 68 I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~-~~~s~~~~~~L~~~~~~~~i~~~~~~~~~~~~~is~~~~~~~~ 146 (354)
||++..+.++..+..+|+.|++... .-++.|..-. ++.+++..+.|.. .+ ++.++....-.........+..
T Consensus 4 IVi~~g~~~~~~a~~lI~~LR~~g~-~LPIEI~~~~~~dl~~~~~~~l~~-~q--~v~~vd~~~~~~~~~~~~~~~~--- 76 (271)
T PF11051_consen 4 IVITAGDKYLWLALRLIRVLRRLGN-TLPIEIIYPGDDDLSKEFCEKLLP-DQ--DVWFVDASCVIDPDYLGKSFSK--- 76 (271)
T ss_pred EEEEecCccHHHHHHHHHHHHHhCC-CCCEEEEeCCccccCHHHHHHHhh-hh--hhheecceEEeecccccccccc---
Confidence 8888888999999999999998543 3456555443 4456665555543 11 2222221111111111110100
Q ss_pred CchhhHHHhhhhhcccccCeEEEEecceEEeccHHHHHhcC
Q 018535 147 QPLNYARIYLADIMPANVKRVIYLDSDLVVVDDIGKLWDVD 187 (354)
Q Consensus 147 s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~Dl~eL~~~d 187 (354)
..|..=.+.-++. ..+.||+||+|.|...|++.||+.+
T Consensus 77 --~~~~~K~lA~l~s-sFeevllLDaD~vpl~~p~~lF~~~ 114 (271)
T PF11051_consen 77 --KGFQNKWLALLFS-SFEEVLLLDADNVPLVDPEKLFESE 114 (271)
T ss_pred --CCchhhhhhhhhC-CcceEEEEcCCcccccCHHHHhcCc
Confidence 0233333445565 6999999999999999999999875
No 26
>PLN03182 xyloglucan 6-xylosyltransferase; Provisional
Probab=96.10 E-value=0.019 Score=56.30 Aligned_cols=140 Identities=21% Similarity=0.380 Sum_probs=75.3
Q ss_pred cccccCeEEEEecceEEeccHHHHHhcCCCCCeEEeecccccCcccccccccccchhhhcccCCCCCcceeeeeEEEecH
Q 018535 160 MPANVKRVIYLDSDLVVVDDIGKLWDVDLEGRVLAAPEYCHANFTNFFTDLFWSDRNLAKTFDGRDPCYFNTGVMVMNVE 239 (354)
Q Consensus 160 lp~~~dRvLYLD~D~IV~~Dl~eL~~~dl~g~~iAAv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yFNSGVmLinl~ 239 (354)
.| +++-+.|||+|+||.+-- +++.++.+ .+. |+. .. -|.. ..+..++-...|+||+||-..
T Consensus 195 ~P-eaEWiWWLDsDALImNms---felPlery-----~~~--NlV---ih-g~~~----~l~~~kdW~GLNtGsFLIRNc 255 (429)
T PLN03182 195 HP-EVEWIWWMDSDALFTDMT---FEIPLEKY-----EGY--NLV---IH-GWDE----LVYDQKSWIGLNTGSFLIRNC 255 (429)
T ss_pred CC-CceEEEEecCCceeecCC---CCCCHhHc-----CCc--Cee---ec-cchh----hheeccccCccceeeEEEEcC
Confidence 47 699999999999998631 12222210 000 000 00 0110 011223456899999999777
Q ss_pred HHHhcChHHHHHHHHHH-----------------hccccccCCCCccHHHHHhc------cceeecCcccccccCCCC--
Q 018535 240 KWRQGGYSQRVEEWMVV-----------------QKQKRIYHLGSLPPFLLVLA------GNIKGVDHRWNQHGLGGD-- 294 (354)
Q Consensus 240 k~R~~~i~~~~~~~~~~-----------------~~~~~~~~~~DQd~LN~vf~------~~i~~Lp~~wN~~~~~~~-- 294 (354)
.|-.. +.+ .|... .+.+..+...||.+|-+++. +.-.+|...|-.++.+..
T Consensus 256 qWSld-lLD---aWa~mgp~~~~~~~~g~~l~~~l~~rp~~eaDDQSAlvyLl~~~~~~w~~kv~le~~y~l~Gyw~~iv 331 (429)
T PLN03182 256 QWSLD-LLD---AWAPMGPKGPIRDEAGKILTAELKGRPAFEADDQSALVYLLLTQRERWGDKVYLENSYYLHGYWVGLV 331 (429)
T ss_pred HHHHH-HHH---HHHhcCCCCchhhhHHHHHHHhhcCCCCCCcccHHHHHHHHHhcchhhccceEEeecceeccccHHHH
Confidence 66542 111 12221 11233456789998776652 233568888888776421
Q ss_pred -ccccccccCCCC-----CCEEEEcCCCCCCCCCC
Q 018535 295 -NIEGKCRNLHPG-----PISLLHWSGKGKPWLRL 323 (354)
Q Consensus 295 -~~~~~~~~~~~~-----~~~IIHf~g~~KPW~~~ 323 (354)
.+++.-...+++ -+.|.||+| .||....
T Consensus 332 ~~yee~~~~~~~g~gd~rwPfvtHF~G-ckpC~~~ 365 (429)
T PLN03182 332 DRYEEMMEKYHPGLGDDRWPFVTHFVG-CKPCGGY 365 (429)
T ss_pred HHHHHHHHhcCCCCCCcccceeEeecc-ceecCCC
Confidence 111111112222 258999999 8999654
No 27
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of Caenorhabditis elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane; PDB: 2P72_B 2P73_A 2P6W_A.
Probab=95.68 E-value=0.0066 Score=56.20 Aligned_cols=151 Identities=19% Similarity=0.264 Sum_probs=16.7
Q ss_pred hhHHHh-hhhhc---ccccCeEEEEecceEEeccHHHHHhcCCC----------CCeEEeecccccCcccccccccccch
Q 018535 150 NYARIY-LADIM---PANVKRVIYLDSDLVVVDDIGKLWDVDLE----------GRVLAAPEYCHANFTNFFTDLFWSDR 215 (354)
Q Consensus 150 ~y~Rl~-i~~ll---p~~~dRvLYLD~D~IV~~Dl~eL~~~dl~----------g~~iAAv~d~~~~~~~~~~~~~~~~~ 215 (354)
++.|+. +-+.+ | +++-|+|||+|++|...=-+|-+.-|+ +..+...+.. .+.+. ...+
T Consensus 60 ~W~K~~~lr~~m~~~P-~~~wv~~lD~Dali~n~~~~L~~~il~p~~L~~~~~r~~~~~p~~~~----~~~~~---~~~~ 131 (239)
T PF05637_consen 60 SWAKIPALRAAMKKYP-EAEWVWWLDSDALIMNPDFSLEEHILSPSRLDSLLLRDVPIVPPDSI----IKTYS---VIDG 131 (239)
T ss_dssp HHTHHHHHHHHHHH-T-T-SEEEEE-TTEEE-------------------------------------------------
T ss_pred hhHHHHHHHHHHHhCC-CCCEEEEEcCCeEEEeccccccccccccccccccccccccccccccc----ccccc---cccc
Confidence 445542 33344 7 589999999999998655554432221 1111111100 00000 0000
Q ss_pred hhhcccCCCCCcceeeeeEEEecHHHHhcChHHHHHHHHHHhccccccCCCCccHHHHHhc------cceeecCccc-cc
Q 018535 216 NLAKTFDGRDPCYFNTGVMVMNVEKWRQGGYSQRVEEWMVVQKQKRIYHLGSLPPFLLVLA------GNIKGVDHRW-NQ 288 (354)
Q Consensus 216 ~~~~~~~~~~~~yFNSGVmLinl~k~R~~~i~~~~~~~~~~~~~~~~~~~~DQd~LN~vf~------~~i~~Lp~~w-N~ 288 (354)
.-...+...+..++|+|++++-...|-.. +.+...+..............+|.+|-.++. +++..+|.+| |.
T Consensus 132 ~~~~li~t~d~~gLNtGsFliRns~ws~~-fLd~w~~~~~~~~~~~~~~~~EQsAl~~ll~~~~~~~~~~~~vpq~~~ns 210 (239)
T PF05637_consen 132 NDIHLIITQDWNGLNTGSFLIRNSPWSRD-FLDAWADPLYRNYDWDQLEFDEQSALEHLLQWHPEILSKVALVPQRWFNS 210 (239)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 00011223457799999999966665542 2222111111001111123568988775544 3455666544 32
Q ss_pred ccCCCCccccccccCCCCCCEEEEcCC
Q 018535 289 HGLGGDNIEGKCRNLHPGPISLLHWSG 315 (354)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~IIHf~g 315 (354)
...+... ....+++ -|+||+|
T Consensus 211 y~~~~~~-----~~~~~GD-fvvhfaG 231 (239)
T PF05637_consen 211 YPEDECN-----YQYKEGD-FVVHFAG 231 (239)
T ss_dssp ---------------------------
T ss_pred ccccccc-----ccccccc-ccccccc
Confidence 2111111 1123344 6999999
No 28
>cd02515 Glyco_transf_6 Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens. Glycosyltransferase family 6, GT_6, comprises enzymes with three known activities: alpha-1,3-galactosyltransferase, alpha-1,3 N-acetylgalactosaminyltransferase, and alpha-galactosyltransferase. UDP-galactose:beta-galactosyl alpha-1,3-galactosyltransferase (alpha3GT) catalyzes the transfer of galactose from UDP-alpha-d-galactose into an alpha-1,3 linkage with beta-galactosyl groups in glycoconjugates. The enzyme exists in most mammalian species but is absent from humans, apes, and old world monkeys as a result of the mutational inactivation of the gene. The alpha-1,3 N-acetylgalactosaminyltransferase and alpha-galactosyltransferase are responsible for the production of the human ABO blood group antigens. A N-acetylgalactosaminyltransferases use a UDP-GalNAc donor to convert the H-antigen acceptor to the A antigen, whereas a galactosyltransferase use
Probab=94.35 E-value=3.3 Score=38.80 Aligned_cols=198 Identities=15% Similarity=0.164 Sum_probs=106.7
Q ss_pred CceEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHHhhCCcceEEEEEecccccccccchhHHh
Q 018535 64 QTIHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTFPYLNLKVYKFDSNRVRGKISKSIRQ 143 (354)
Q Consensus 64 ~~i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~~~~~~~~i~~~~~~~~~~~~~is~~~~~ 143 (354)
-+|.|.+-+-..|...+.--+.|.-+|=-...++.++|++|..+.- ..+ +..|.-++++..+..+ ...+.
T Consensus 34 ~tIgl~vfatGkY~~f~~~F~~SAEk~Fm~g~~v~YyVFTD~~~~~--p~v-~lg~~r~~~V~~v~~~---~~W~~---- 103 (271)
T cd02515 34 ITIGLTVFAVGKYTEFLERFLESAEKHFMVGYRVIYYIFTDKPAAV--PEV-ELGPGRRLTVLKIAEE---SRWQD---- 103 (271)
T ss_pred CEEEEEEEEeccHHHHHHHHHHHHHHhccCCCeeEEEEEeCCcccC--ccc-ccCCCceeEEEEeccc---cCCcH----
Confidence 5677777788899999999999998887656778999999965320 000 1122334666665332 12221
Q ss_pred hccCchhhHHHh-----hhhhcccccCeEEEEecceEEeccHH-HHHhcCCCCCeEEeecccccCcccccccc--cc---
Q 018535 144 ALDQPLNYARIY-----LADIMPANVKRVIYLDSDLVVVDDIG-KLWDVDLEGRVLAAPEYCHANFTNFFTDL--FW--- 212 (354)
Q Consensus 144 ~~~s~~~y~Rl~-----i~~llp~~~dRvLYLD~D~IV~~Dl~-eL~~~dl~g~~iAAv~d~~~~~~~~~~~~--~~--- 212 (354)
.+..|+- +.+..-.++|-+.++|+|+++.+++. |.. |..+|... .. ||... .+
T Consensus 104 -----~sl~Rm~~~~~~~~~~~~~e~DYlF~~dvd~~F~~~ig~E~L-----g~lva~lH---p~---~y~~~~~~fpYE 167 (271)
T cd02515 104 -----ISMRRMKTLADHIADRIGHEVDYLFCMDVDMVFQGPFGVETL-----GDSVAQLH---PW---WYGKPRKQFPYE 167 (271)
T ss_pred -----HHHHHHHHHHHHHHHhhcccCCEEEEeeCCceEeecCCHHHh-----hhhheecC---hh---hhcCCCCCCCCc
Confidence 2333332 22333236999999999999999987 221 23444421 11 11110 11
Q ss_pred cchhhhccc--CCCCCcceeeeeEEEecHHHHhcChHHHHHHHHHHhccccc-cCCCCccHHHHHhc-cc-eeecCcccc
Q 018535 213 SDRNLAKTF--DGRDPCYFNTGVMVMNVEKWRQGGYSQRVEEWMVVQKQKRI-YHLGSLPPFLLVLA-GN-IKGVDHRWN 287 (354)
Q Consensus 213 ~~~~~~~~~--~~~~~~yFNSGVmLinl~k~R~~~i~~~~~~~~~~~~~~~~-~~~~DQd~LN~vf~-~~-i~~Lp~~wN 287 (354)
++|.- ..+ .+.+.-|+-+||.==-.+... ++++.+.+-+..-..+.+ -...|..-||..|- .+ .+.|++.|+
T Consensus 168 Rrp~S-~AyIp~~eGdfYy~Ga~~GG~~~~vl--~l~~~c~~~i~~D~~n~I~A~wHDESHLNkYf~~~Kp~KiLSPeY~ 244 (271)
T cd02515 168 RRPSS-AAYIPEGEGDFYYHGAVFGGSVEEVY--RLTRACHEGILADKANGIEARWHDESHLNKYFLLHKPTKVLSPEYL 244 (271)
T ss_pred CCCCc-cccccCCCCCeEEeeeecCccHHHHH--HHHHHHHHHHHHHHhCCceEEeecHhHhHHHHhhCCCCeecChhhc
Confidence 11110 111 134456766665422222222 134444443332112222 12346667997654 33 899999999
Q ss_pred ccc
Q 018535 288 QHG 290 (354)
Q Consensus 288 ~~~ 290 (354)
+..
T Consensus 245 w~e 247 (271)
T cd02515 245 WDD 247 (271)
T ss_pred CCc
Confidence 864
No 29
>PLN03181 glycosyltransferase; Provisional
Probab=93.21 E-value=0.14 Score=50.43 Aligned_cols=106 Identities=19% Similarity=0.296 Sum_probs=57.2
Q ss_pred cccccCeEEEEecceEEeccHHHHHhcCCC---CCeEEeecccccCcccccccccccchhhhcccCCCCCcceeeeeEEE
Q 018535 160 MPANVKRVIYLDSDLVVVDDIGKLWDVDLE---GRVLAAPEYCHANFTNFFTDLFWSDRNLAKTFDGRDPCYFNTGVMVM 236 (354)
Q Consensus 160 lp~~~dRvLYLD~D~IV~~Dl~eL~~~dl~---g~~iAAv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yFNSGVmLi 236 (354)
.| +.+-+-|||+|+||.+.=-+ +++. +.-+- +. -|.+ ..+..++-..+|+||+||
T Consensus 196 ~P-eAEWfWWLDsDALIMNp~~s---LPl~ry~~~NLv-vh-------------g~p~----~vy~~qdw~GlN~GsFLI 253 (453)
T PLN03181 196 HP-EAEWIWWVDSDAVFTDMDFK---LPLHRYRDHNLV-VH-------------GWPK----LIYEKRSWTALNAGVFLI 253 (453)
T ss_pred CC-CceEEEEecCCceeecCCCC---CCHhhcCCcccc-cc-------------CCcc----cccccccccccceeeeEE
Confidence 67 69999999999999865211 1111 11110 00 0100 011123456899999999
Q ss_pred ecHHHHhcChHHHHHH-HHHH-----------------hccccccCCCCccHHHHHhc---c---ceeecCcccccccCC
Q 018535 237 NVEKWRQGGYSQRVEE-WMVV-----------------QKQKRIYHLGSLPPFLLVLA---G---NIKGVDHRWNQHGLG 292 (354)
Q Consensus 237 nl~k~R~~~i~~~~~~-~~~~-----------------~~~~~~~~~~DQd~LN~vf~---~---~i~~Lp~~wN~~~~~ 292 (354)
--..|-. .+++ |... .+.+...+-+||..|-.++- . .-.+|...|-.++.+
T Consensus 254 RNcqWSl-----~LLDaWa~Mgp~~p~~~~~G~~l~~~l~~r~~~eaDDQsaLvyll~~~~~~w~~k~ylE~~yy~~GyW 328 (453)
T PLN03181 254 RNCQWSL-----DFMDAWASMGPASPEYAKWGKILRSTFKDKLFPESDDQSALVYLLYKHKEKWGDKIYLEGEYYFEGYW 328 (453)
T ss_pred ecCHHHH-----HHHHHHHhcCCCCchHHHHHHHHHHHhCCCCCCCccchHHHHHHHHhccchhccceeeecceeeeeeH
Confidence 6655543 2221 2221 12233455678987665432 1 235688888877653
No 30
>KOG1950 consensus Glycosyl transferase, family 8 - glycogenin [Carbohydrate transport and metabolism]
Probab=92.08 E-value=0.19 Score=49.55 Aligned_cols=92 Identities=16% Similarity=0.100 Sum_probs=52.3
Q ss_pred CcceeeeeEEEecHHHHhcChHHHHHHHHHHhccccccCCCCccHHHHHhccceeecCccccccc-CCC-CccccccccC
Q 018535 226 PCYFNTGVMVMNVEKWRQGGYSQRVEEWMVVQKQKRIYHLGSLPPFLLVLAGNIKGVDHRWNQHG-LGG-DNIEGKCRNL 303 (354)
Q Consensus 226 ~~yFNSGVmLinl~k~R~~~i~~~~~~~~~~~~~~~~~~~~DQd~LN~vf~~~i~~Lp~~wN~~~-~~~-~~~~~~~~~~ 303 (354)
...||+|.|++-..-.. +..++.......-+..++|+++|.+|...-...|+.+|..- ... ..........
T Consensus 197 ~~~~n~~~~v~~ps~~~-------~~~~~~~~~~~~~~~~~~q~~l~~~f~~~~~~~~~~~n~~~~~~~~~p~~~~l~~~ 269 (369)
T KOG1950|consen 197 PLIFNSGLLVFEPSLCN-------YKDLMEFSEEFESYNGADQGFLHLIFSWIPDRPPPSVNLNLAKLWRHPKKNDLSRA 269 (369)
T ss_pred cceeccCccccCCCccc-------hhhHHHhhcccCCCCCccchhhHHHhhcccCCCcccccccccccccCccccchhhc
Confidence 45699999998544322 11233322223346688999999999876668888888642 111 1100000011
Q ss_pred CCCCCEEEEcCCCCCCCCCCC
Q 018535 304 HPGPISLLHWSGKGKPWLRLD 324 (354)
Q Consensus 304 ~~~~~~IIHf~g~~KPW~~~~ 324 (354)
.......+||.|..|||....
T Consensus 270 ~~~~~~~~~y~~~~~p~~~~~ 290 (369)
T KOG1950|consen 270 SSVLRYALHYLGANKPELCYR 290 (369)
T ss_pred ccccchhhhccccCCCCcccc
Confidence 111224569999778887653
No 31
>PF03414 Glyco_transf_6: Glycosyltransferase family 6; InterPro: IPR005076 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 6 GT6 from CAZY comprises enzymes with three known activities; alpha-1,3-galactosyltransferase (2.4.1.151 from EC); alpha-1,3 N-acetylgalactosaminyltransferase (2.4.1.40 from EC); alpha-galactosyltransferase (2.4.1.37 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0016020 membrane; PDB: 2Y7A_B 2O1G_A 1R82_A 2RJ1_A 3IOJ_B 2RJ4_A 3I0C_A 3SX8_A 1ZJ1_A 3I0E_A ....
Probab=90.79 E-value=12 Score=36.37 Aligned_cols=204 Identities=14% Similarity=0.141 Sum_probs=97.8
Q ss_pred CceEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHHhhCCcceEEEEEecccccccccchhHHh
Q 018535 64 QTIHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTFPYLNLKVYKFDSNRVRGKISKSIRQ 143 (354)
Q Consensus 64 ~~i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~~~~~~~~i~~~~~~~~~~~~~is~~~~~ 143 (354)
-+|-+++.+-+.|...+.--+.|.-+|=-...++.++|++|..+.- -.++ .-+.-++++..+... .+.+.....
T Consensus 99 ~tIGL~vfA~GkY~~fl~~Fl~SAek~Fm~g~~V~YYVFTD~p~~v--P~i~-l~~~r~~~V~~v~~~---~~Wqd~sm~ 172 (337)
T PF03414_consen 99 ITIGLTVFATGKYIVFLKDFLESAEKHFMVGHRVIYYVFTDQPSKV--PRIE-LGPGRRLKVFEVQEE---KRWQDISMM 172 (337)
T ss_dssp -EEEEEEEE-CCHHHHHHHHHHHHHHHBSTTSEEEEEEEES-GGGS---------TTEEEEEEE-SGG---SSHHHHHHH
T ss_pred ceEEEEEEecccHHHHHHHHHHhHHHhccCCcEEEEEEEeCchhhC--Cccc-cCCCceeEEEEeccc---CCCccchhH
Confidence 4566666677899999999999999986656789999999876420 0010 112224556655321 122211000
Q ss_pred hccCchhhHHHhhhhhcccccCeEEEEecceEEeccHHHHHhcCCCCCeEEeecccccCccccccc--ccccch-hh-hc
Q 018535 144 ALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDDIGKLWDVDLEGRVLAAPEYCHANFTNFFTD--LFWSDR-NL-AK 219 (354)
Q Consensus 144 ~~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~Dl~eL~~~dl~g~~iAAv~d~~~~~~~~~~~--~~~~~~-~~-~~ 219 (354)
++ ..+.+.-...++. ++|-+..+|+|+++.+++.. +.=|..+|... .. ||.. ..+... +. ..
T Consensus 173 Rm---~~i~~~i~~~~~~-EvDYLFc~dvd~~F~~~vGv----E~Lg~lva~LH---p~---~y~~~~~~FpYERrp~S~ 238 (337)
T PF03414_consen 173 RM---EMISEHIEQHIQH-EVDYLFCMDVDMVFQDHVGV----EILGDLVATLH---PW---FYFKPRESFPYERRPKSQ 238 (337)
T ss_dssp HH---HHHHHHHHHCHHH-H-SEEEEEESSEEE-S-B-G----GG-SSEEEEES---TT---TTTSTGGGS--B-STTST
T ss_pred HH---HHHHHHHHHHHhh-cCCEEEEEecceEEecccCH----HHHHHHHHHhC---HH---HHCCChhhCccccCcccc
Confidence 00 1222222233444 69999999999999998873 11156666543 11 1111 011111 11 11
Q ss_pred cc--CCCCCcceeeeeEEEecHHHHhcChHHHHHHHHHHhccccc-cCCCCccHHHHHh--ccceeecCcccccc
Q 018535 220 TF--DGRDPCYFNTGVMVMNVEKWRQGGYSQRVEEWMVVQKQKRI-YHLGSLPPFLLVL--AGNIKGVDHRWNQH 289 (354)
Q Consensus 220 ~~--~~~~~~yFNSGVmLinl~k~R~~~i~~~~~~~~~~~~~~~~-~~~~DQd~LN~vf--~~~i~~Lp~~wN~~ 289 (354)
.+ .+.+..|+-+|+.==-.....+ +++.+..-+..-..+.+ --..|.--||..| +...+.|+++|++.
T Consensus 239 AyIp~~eGDfYY~ga~fGGt~~~vl~--Lt~~c~~~i~~D~~n~I~A~WhDESHLNKYfl~~KPtKvLSPEY~Wd 311 (337)
T PF03414_consen 239 AYIPYGEGDFYYHGAFFGGTVEEVLR--LTEACHQGIMQDKANGIEALWHDESHLNKYFLYHKPTKVLSPEYCWD 311 (337)
T ss_dssp TB--TT--S--EECCEEEECHHHHHH--HHHHHHHHHHHHHHTT---TTCHHHHHHHHHHHS--SEEE-GGGSBS
T ss_pred ccccCCCCCeEEeceecCCcHHHHHH--HHHHHHHHHHhhhhcCceEeccchhhhHHHHhhCCCceecCHHHccC
Confidence 11 1344567777765433333322 44555544432222222 1234666799765 44588999999975
No 32
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=87.16 E-value=5.9 Score=32.41 Aligned_cols=92 Identities=13% Similarity=0.120 Sum_probs=52.9
Q ss_pred hhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHHhhC-CcceEEEEEecccccccccchhHHhhccCchhhHHHh
Q 018535 77 LRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTF-PYLNLKVYKFDSNRVRGKISKSIRQALDQPLNYARIY 155 (354)
Q Consensus 77 l~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~~~~-~~~~i~~~~~~~~~~~~~is~~~~~~~~s~~~y~Rl~ 155 (354)
...+.-++.|+++.+. ....+.|+.++.+++..+.+++.. ...++++...+... + ....+-.
T Consensus 10 ~~~l~~~l~sl~~q~~--~~~eiivvdd~s~d~~~~~~~~~~~~~~~i~~i~~~~n~-------g--------~~~~~n~ 72 (169)
T PF00535_consen 10 AEYLERTLESLLKQTD--PDFEIIVVDDGSTDETEEILEEYAESDPNIRYIRNPENL-------G--------FSAARNR 72 (169)
T ss_dssp TTTHHHHHHHHHHHSG--CEEEEEEEECS-SSSHHHHHHHHHCCSTTEEEEEHCCCS-------H--------HHHHHHH
T ss_pred HHHHHHHHHHHhhccC--CCEEEEEeccccccccccccccccccccccccccccccc-------c--------ccccccc
Confidence 5556678888888843 457888777776444444444321 13356655543221 1 1223333
Q ss_pred hhhhcccccCeEEEEecceEEecc-HHHHHhcC
Q 018535 156 LADIMPANVKRVIYLDSDLVVVDD-IGKLWDVD 187 (354)
Q Consensus 156 i~~llp~~~dRvLYLD~D~IV~~D-l~eL~~~d 187 (354)
.-+... -+-++++|+|.++..+ |.+|.+.-
T Consensus 73 ~~~~a~--~~~i~~ld~D~~~~~~~l~~l~~~~ 103 (169)
T PF00535_consen 73 GIKHAK--GEYILFLDDDDIISPDWLEELVEAL 103 (169)
T ss_dssp HHHH----SSEEEEEETTEEE-TTHHHHHHHHH
T ss_pred cccccc--eeEEEEeCCCceEcHHHHHHHHHHH
Confidence 334443 3699999999999988 88887753
No 33
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=84.73 E-value=13 Score=33.01 Aligned_cols=99 Identities=17% Similarity=0.141 Sum_probs=54.5
Q ss_pred eEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHHhhCCcceEEEEEecccccccccchhHHhhc
Q 018535 66 IHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTFPYLNLKVYKFDSNRVRGKISKSIRQAL 145 (354)
Q Consensus 66 i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~~~~~~~~i~~~~~~~~~~~~~is~~~~~~~ 145 (354)
|-|++.+=.+-...+..++.|+.+.+ +..+.|+.++.+++....+....+...+.+.. ... .++
T Consensus 2 isVvIp~~ne~~~~l~~~l~sl~~q~----~~eiivvdd~s~d~~~~~l~~~~~~~~~~v~~--~~~-~g~--------- 65 (235)
T cd06434 2 VTVIIPVYDEDPDVFRECLRSILRQK----PLEIIVVTDGDDEPYLSILSQTVKYGGIFVIT--VPH-PGK--------- 65 (235)
T ss_pred eEEEEeecCCChHHHHHHHHHHHhCC----CCEEEEEeCCCChHHHHHHHhhccCCcEEEEe--cCC-CCh---------
Confidence 44555443333466778899999876 25777777777665444443222222233222 111 111
Q ss_pred cCchhhHHHhhhhhcccccCeEEEEecceEEecc-HHHHHhc
Q 018535 146 DQPLNYARIYLADIMPANVKRVIYLDSDLVVVDD-IGKLWDV 186 (354)
Q Consensus 146 ~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~D-l~eL~~~ 186 (354)
..++-..-+.. ..|-|++||+|+++..| |..|.+.
T Consensus 66 ----~~a~n~g~~~a--~~d~v~~lD~D~~~~~~~l~~l~~~ 101 (235)
T cd06434 66 ----RRALAEGIRHV--TTDIVVLLDSDTVWPPNALPEMLKP 101 (235)
T ss_pred ----HHHHHHHHHHh--CCCEEEEECCCceeChhHHHHHHHh
Confidence 01111111111 46999999999999977 7777764
No 34
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=82.01 E-value=22 Score=29.06 Aligned_cols=89 Identities=18% Similarity=0.178 Sum_probs=51.8
Q ss_pred hhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHHhhCCcceEEEEEecccccccccchhHHhhccCchhhHHHhh
Q 018535 77 LRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTFPYLNLKVYKFDSNRVRGKISKSIRQALDQPLNYARIYL 156 (354)
Q Consensus 77 l~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~~~~~~~~i~~~~~~~~~~~~~is~~~~~~~~s~~~y~Rl~i 156 (354)
...+.-++.|+.+... ....+.|+.++..++....+++..+ ++++...+.. .+ . ..+|-..
T Consensus 9 ~~~l~~~l~sl~~~~~--~~~~iiivdd~s~~~~~~~~~~~~~--~~~~~~~~~~--~g-~------------~~a~n~~ 69 (166)
T cd04186 9 LEYLKACLDSLLAQTY--PDFEVIVVDNASTDGSVELLRELFP--EVRLIRNGEN--LG-F------------GAGNNQG 69 (166)
T ss_pred HHHHHHHHHHHHhccC--CCeEEEEEECCCCchHHHHHHHhCC--CeEEEecCCC--cC-h------------HHHhhHH
Confidence 5567789999998765 3467777777766555555554443 3444332111 01 1 1122222
Q ss_pred hhhcccccCeEEEEecceEEecc-HHHHHhc
Q 018535 157 ADIMPANVKRVIYLDSDLVVVDD-IGKLWDV 186 (354)
Q Consensus 157 ~~llp~~~dRvLYLD~D~IV~~D-l~eL~~~ 186 (354)
-+.. +.+-++++|+|.++..+ +..+.+.
T Consensus 70 ~~~~--~~~~i~~~D~D~~~~~~~l~~~~~~ 98 (166)
T cd04186 70 IREA--KGDYVLLLNPDTVVEPGALLELLDA 98 (166)
T ss_pred HhhC--CCCEEEEECCCcEECccHHHHHHHH
Confidence 2222 46899999999998866 6666553
No 35
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=81.75 E-value=35 Score=30.62 Aligned_cols=104 Identities=14% Similarity=0.095 Sum_probs=57.3
Q ss_pred CceEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHHhhCCcceEEEEEecccccccccchhHHh
Q 018535 64 QTIHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTFPYLNLKVYKFDSNRVRGKISKSIRQ 143 (354)
Q Consensus 64 ~~i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~~~~~~~~i~~~~~~~~~~~~~is~~~~~ 143 (354)
..+-|++.+=+ -...+..++.|+.+....+..+.+.|+.++.++...+.+++.... +++++..+.. .++
T Consensus 29 ~~isVvip~~n-~~~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~-~v~~i~~~~~--~g~------- 97 (251)
T cd06439 29 PTVTIIIPAYN-EEAVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEIAREYADK-GVKLLRFPER--RGK------- 97 (251)
T ss_pred CEEEEEEecCC-cHHHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHHHHHHHhhC-cEEEEEcCCC--CCh-------
Confidence 45777765532 336677889999886543333677777776654433334332111 3444432211 111
Q ss_pred hccCchhhHHHhhhhhcccccCeEEEEecceEEecc-HHHHHhc
Q 018535 144 ALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDD-IGKLWDV 186 (354)
Q Consensus 144 ~~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~D-l~eL~~~ 186 (354)
..++-..-+.. .-|-++++|+|+++..+ +.+|++.
T Consensus 98 ------~~a~n~gi~~a--~~d~i~~lD~D~~~~~~~l~~l~~~ 133 (251)
T cd06439 98 ------AAALNRALALA--TGEIVVFTDANALLDPDALRLLVRH 133 (251)
T ss_pred ------HHHHHHHHHHc--CCCEEEEEccccCcCHHHHHHHHHH
Confidence 12222222223 23899999999999866 7777765
No 36
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=80.33 E-value=36 Score=29.98 Aligned_cols=104 Identities=12% Similarity=0.003 Sum_probs=52.2
Q ss_pred eEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHHhhCCcceEEEEEecccccccccchhHHhhc
Q 018535 66 IHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTFPYLNLKVYKFDSNRVRGKISKSIRQAL 145 (354)
Q Consensus 66 i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~~~~~~~~i~~~~~~~~~~~~~is~~~~~~~ 145 (354)
+-|++.+=..-...+..++.|++...-.++.+.+.|+.++.+++..+.+++......+++...+... + ...
T Consensus 3 vsviip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~--~-~~~------ 73 (234)
T cd06421 3 VDVFIPTYNEPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELRALAAELGVEYGYRYLTRPDNR--H-AKA------ 73 (234)
T ss_pred eEEEEecCCCcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCchhHHHHHHHhhcccCceEEEeCCCC--C-CcH------
Confidence 4566544332234456788999875543333677777666655555555443222123333222110 0 000
Q ss_pred cCchhhHHHhhhhhcccccCeEEEEecceEEecc-HHHHHh
Q 018535 146 DQPLNYARIYLADIMPANVKRVIYLDSDLVVVDD-IGKLWD 185 (354)
Q Consensus 146 ~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~D-l~eL~~ 185 (354)
..+-..-+.. ..+-++++|+|.++..| |..|.+
T Consensus 74 -----~~~n~~~~~a--~~d~i~~lD~D~~~~~~~l~~l~~ 107 (234)
T cd06421 74 -----GNLNNALAHT--TGDFVAILDADHVPTPDFLRRTLG 107 (234)
T ss_pred -----HHHHHHHHhC--CCCEEEEEccccCcCccHHHHHHH
Confidence 0001111112 46999999999999754 333444
No 37
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=76.56 E-value=26 Score=28.40 Aligned_cols=90 Identities=16% Similarity=0.080 Sum_probs=47.6
Q ss_pred hhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHHhhCCc--ceEEEEEecccccccccchhHHhhccCchhhHHHh
Q 018535 78 RGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTFPY--LNLKVYKFDSNRVRGKISKSIRQALDQPLNYARIY 155 (354)
Q Consensus 78 ~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~~~~~~--~~i~~~~~~~~~~~~~is~~~~~~~~s~~~y~Rl~ 155 (354)
..+..++.|+++.+. ....+.|+.++.+++..+.+.+.... ..+.+.. .... .+ . ..+|-.
T Consensus 10 ~~l~~~l~sl~~q~~--~~~~iivvdd~s~d~t~~~~~~~~~~~~~~~~~~~-~~~~-~g-~------------~~~~n~ 72 (180)
T cd06423 10 AVIERTIESLLALDY--PKLEVIVVDDGSTDDTLEILEELAALYIRRVLVVR-DKEN-GG-K------------AGALNA 72 (180)
T ss_pred HHHHHHHHHHHhCCC--CceEEEEEeCCCccchHHHHHHHhccccceEEEEE-eccc-CC-c------------hHHHHH
Confidence 667788999998764 34777888777655433333332111 1122221 1111 11 1 111111
Q ss_pred hhhhcccccCeEEEEecceEEecc-HHHHHhc
Q 018535 156 LADIMPANVKRVIYLDSDLVVVDD-IGKLWDV 186 (354)
Q Consensus 156 i~~llp~~~dRvLYLD~D~IV~~D-l~eL~~~ 186 (354)
.-+.. ..+-++++|+|.++..+ |.+++..
T Consensus 73 ~~~~~--~~~~i~~~D~D~~~~~~~l~~~~~~ 102 (180)
T cd06423 73 GLRHA--KGDIVVVLDADTILEPDALKRLVVP 102 (180)
T ss_pred HHHhc--CCCEEEEECCCCCcChHHHHHHHHH
Confidence 11222 35899999999999866 5666343
No 38
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=76.51 E-value=22 Score=34.61 Aligned_cols=114 Identities=12% Similarity=0.015 Sum_probs=57.2
Q ss_pred eEEEE-EeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHHhhCCcceEEE-EEecccccccccchhHHh
Q 018535 66 IHITM-TLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTFPYLNLKV-YKFDSNRVRGKISKSIRQ 143 (354)
Q Consensus 66 i~I~~-~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~~~~~~~~i~~-~~~~~~~~~~~is~~~~~ 143 (354)
++|++ +++ ...++.-++.||+++.+..+...++|..|+..++..+.++. +. ..+++ .+.+........+... .
T Consensus 2 ~PVlv~ayN--Rp~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~~~~~v~~-~~-~~i~~i~~~~~~~~~~~~~~~~-~ 76 (334)
T cd02514 2 IPVLVIACN--RPDYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEEVADVAKS-FG-DGVTHIQHPPISIKNVNPPHKF-Q 76 (334)
T ss_pred cCEEEEecC--CHHHHHHHHHHHHhccccCCCceEEEEeCCCchHHHHHHHh-hc-cccEEEEcccccccccCccccc-c
Confidence 34554 444 45567788999999853335577888888876654444433 21 12221 1111110000000000 0
Q ss_pred hccCchhhHHHhhhhhccc-ccCeEEEEecceEEeccHHHHH
Q 018535 144 ALDQPLNYARIYLADIMPA-NVKRVIYLDSDLVVVDDIGKLW 184 (354)
Q Consensus 144 ~~~s~~~y~Rl~i~~llp~-~~dRvLYLD~D~IV~~Dl~eL~ 184 (354)
.+.....-+|.-+-.++.. .+++||.||.|+++--|.-+.+
T Consensus 77 ~y~~ia~hyk~aln~vF~~~~~~~vIILEDDl~~sPdFf~yf 118 (334)
T cd02514 77 GYYRIARHYKWALTQTFNLFGYSFVIILEDDLDIAPDFFSYF 118 (334)
T ss_pred hhhHHHHHHHHHHHHHHHhcCCCEEEEECCCCccCHhHHHHH
Confidence 0000111222333444421 4899999999999999955444
No 39
>PF04765 DUF616: Protein of unknown function (DUF616); InterPro: IPR006852 The entry represents a protein of unknown function. The function of is unknown although a number of the members are thought to be glycosyltransferases.
Probab=75.14 E-value=7.9 Score=37.12 Aligned_cols=48 Identities=17% Similarity=0.238 Sum_probs=40.3
Q ss_pred hhHHHhhhhhcccccCeEEEEecceEEeccHHHHHhcCC--CCCeEEeecc
Q 018535 150 NYARIYLADIMPANVKRVIYLDSDLVVVDDIGKLWDVDL--EGRVLAAPEY 198 (354)
Q Consensus 150 ~y~Rl~i~~llp~~~dRvLYLD~D~IV~~Dl~eL~~~dl--~g~~iAAv~d 198 (354)
-+.|++...+|| +++--||||+-+.+++|+..|.+--+ ++..+|+..+
T Consensus 140 r~~K~lpHrlfp-~y~ySIWID~ki~L~~Dp~~lie~~l~~~~~~~Ai~~H 189 (305)
T PF04765_consen 140 RIPKLLPHRLFP-NYDYSIWIDGKIQLIVDPLLLIERFLWRKNADIAISKH 189 (305)
T ss_pred cccceeccccCC-CCceEEEEeeeEEEecCHHHHHHHHHhcCCCcEEEeCC
Confidence 477888899999 79999999999999999998887655 4667887654
No 40
>KOG1928 consensus Alpha-1,4-N-acetylglucosaminyltransferase [Carbohydrate transport and metabolism]
Probab=74.91 E-value=1.5 Score=43.04 Aligned_cols=18 Identities=33% Similarity=0.842 Sum_probs=16.6
Q ss_pred EEEecceEEeccHHHHHh
Q 018535 168 IYLDSDLVVVDDIGKLWD 185 (354)
Q Consensus 168 LYLD~D~IV~~Dl~eL~~ 185 (354)
||||+|+||++++..|-+
T Consensus 242 vYLDTDvIvLksl~~l~N 259 (409)
T KOG1928|consen 242 VYLDTDVIVLKSLSNLRN 259 (409)
T ss_pred EEeeccEEEecccccccc
Confidence 899999999999998864
No 41
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=73.95 E-value=41 Score=26.42 Aligned_cols=88 Identities=11% Similarity=0.009 Sum_probs=46.8
Q ss_pred hhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHHhhCCc-ceEEEEEecccccccccchhHHhhccCchhhHHHh
Q 018535 77 LRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTFPY-LNLKVYKFDSNRVRGKISKSIRQALDQPLNYARIY 155 (354)
Q Consensus 77 l~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~~~~~~-~~i~~~~~~~~~~~~~is~~~~~~~~s~~~y~Rl~ 155 (354)
...+..++.|+.+... ....++|+.++.+++..+.+.+.... ....... ... .... ...+-.
T Consensus 9 ~~~l~~~l~s~~~~~~--~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~g~----------~~~~~~ 71 (156)
T cd00761 9 EPYLERCLESLLAQTY--PNFEVIVVDDGSTDGTLEILEEYAKKDPRVIRVI-NEE----NQGL----------AAARNA 71 (156)
T ss_pred HHHHHHHHHHHHhCCc--cceEEEEEeCCCCccHHHHHHHHHhcCCCeEEEE-ecC----CCCh----------HHHHHH
Confidence 5667788999988764 34778888887665444434332111 1111111 111 0110 111111
Q ss_pred hhhhcccccCeEEEEecceEEeccHHHH
Q 018535 156 LADIMPANVKRVIYLDSDLVVVDDIGKL 183 (354)
Q Consensus 156 i~~llp~~~dRvLYLD~D~IV~~Dl~eL 183 (354)
.-... ..+.++++|+|.++..+.-+-
T Consensus 72 ~~~~~--~~d~v~~~d~D~~~~~~~~~~ 97 (156)
T cd00761 72 GLKAA--RGEYILFLDADDLLLPDWLER 97 (156)
T ss_pred HHHHh--cCCEEEEECCCCccCccHHHH
Confidence 11222 369999999999998764443
No 42
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=73.36 E-value=64 Score=32.40 Aligned_cols=103 Identities=19% Similarity=0.155 Sum_probs=57.6
Q ss_pred CceEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHH---HHHHhhCCcceEEEEEecccccccccchh
Q 018535 64 QTIHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVY---SSINSTFPYLNLKVYKFDSNRVRGKISKS 140 (354)
Q Consensus 64 ~~i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~---~~L~~~~~~~~i~~~~~~~~~~~~~is~~ 140 (354)
..+.|++.+=. -...+..++.|+.+.+-++..+++.|+.++.+++.. +.+++.++. +.+...+.+ .++
T Consensus 49 P~vsVIIP~yN-e~~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~~~~~~~--v~v~~~~~~--~Gk---- 119 (439)
T TIGR03111 49 PDITIIIPVYN-SEDTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRAQNEFPG--LSLRYMNSD--QGK---- 119 (439)
T ss_pred CCEEEEEEeCC-ChHHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHHHHhCCC--eEEEEeCCC--CCH----
Confidence 45788875542 236678899999876643345777777777655432 333444554 334333322 111
Q ss_pred HHhhccCchhhHHHhhhhhcccccCeEEEEecceEEecc-HHHHHhc
Q 018535 141 IRQALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDD-IGKLWDV 186 (354)
Q Consensus 141 ~~~~~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~D-l~eL~~~ 186 (354)
+.++-..-+.. .-+-|+.+|+|.++..| +.++.+.
T Consensus 120 ---------a~AlN~gl~~s--~g~~v~~~DaD~~~~~d~L~~l~~~ 155 (439)
T TIGR03111 120 ---------AKALNAAIYNS--IGKYIIHIDSDGKLHKDAIKNMVTR 155 (439)
T ss_pred ---------HHHHHHHHHHc--cCCEEEEECCCCCcChHHHHHHHHH
Confidence 11111111222 23679999999999765 5555543
No 43
>PF07801 DUF1647: Protein of unknown function (DUF1647); InterPro: IPR012444 This entry consists of hypothetical proteins of unknown function.
Probab=72.28 E-value=24 Score=29.94 Aligned_cols=65 Identities=14% Similarity=0.206 Sum_probs=48.4
Q ss_pred CceEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHHhhCCcceEEEEEeccccc
Q 018535 64 QTIHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTFPYLNLKVYKFDSNRV 133 (354)
Q Consensus 64 ~~i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~~~~~~~~i~~~~~~~~~~ 133 (354)
+.+-+|-++.+++...+.-++.||.++.+. ..+ .+..-|++++..+.|++.+++ +++..||....
T Consensus 60 ~~vvfVSa~S~~h~~~~~~~i~si~~~~P~-~k~--ilY~LgL~~~~i~~L~~~~~n--~evr~Fn~s~Y 124 (142)
T PF07801_consen 60 SDVVFVSATSDNHFNESMKSISSIRKFYPN-HKI--ILYDLGLSEEQIKKLKKNFCN--VEVRKFNFSKY 124 (142)
T ss_pred CccEEEEEecchHHHHHHHHHHHHHHHCCC-CcE--EEEeCCCCHHHHHHHHhcCCc--eEEEECCCccC
Confidence 567788889999999999999999999874 444 444668888766777765554 66677775543
No 44
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=69.43 E-value=31 Score=30.14 Aligned_cols=95 Identities=11% Similarity=0.041 Sum_probs=48.3
Q ss_pred hhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHH--hhCCcceEEEEEecccccccccchhHHhhccCchhhHH
Q 018535 76 YLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSIN--STFPYLNLKVYKFDSNRVRGKISKSIRQALDQPLNYAR 153 (354)
Q Consensus 76 yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~--~~~~~~~i~~~~~~~~~~~~~is~~~~~~~~s~~~y~R 153 (354)
....+.-++.||+..+..+..+.+.|+.++.++...+.++ ...+..++.+...+. .. ..+. ..++
T Consensus 8 ~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~v~~~~~~~---~~--~~g~--------~~a~ 74 (229)
T cd04192 8 EAENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQILEFAAAKPNFQLKILNNSR---VS--ISGK--------KNAL 74 (229)
T ss_pred cHHHHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHHHHHHHHhCCCcceEEeeccC---cc--cchh--------HHHH
Confidence 3456778899998876533347777777765443222232 123333343333221 00 0010 1111
Q ss_pred HhhhhhcccccCeEEEEecceEEecc-HHHHHh
Q 018535 154 IYLADIMPANVKRVIYLDSDLVVVDD-IGKLWD 185 (354)
Q Consensus 154 l~i~~llp~~~dRvLYLD~D~IV~~D-l~eL~~ 185 (354)
-..-... ..|-|+++|+|.++..| |+.|..
T Consensus 75 n~g~~~~--~~d~i~~~D~D~~~~~~~l~~l~~ 105 (229)
T cd04192 75 TTAIKAA--KGDWIVTTDADCVVPSNWLLTFVA 105 (229)
T ss_pred HHHHHHh--cCCEEEEECCCcccCHHHHHHHHH
Confidence 1111212 46899999999988744 444444
No 45
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=69.39 E-value=42 Score=33.86 Aligned_cols=117 Identities=13% Similarity=0.108 Sum_probs=54.1
Q ss_pred CceEEE-EEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHHhhCCcceEE-EEEecccccccccchhH
Q 018535 64 QTIHIT-MTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTFPYLNLK-VYKFDSNRVRGKISKSI 141 (354)
Q Consensus 64 ~~i~I~-~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~~~~~~~~i~-~~~~~~~~~~~~is~~~ 141 (354)
..++|+ ++|+ -..++.-++.||+++.+..+...+.|-.|+..++..+.+++ |.. .++ +.+.+...+... +...
T Consensus 93 ~~~pVlV~AcN--Rp~yl~r~L~sLl~~rp~~~~fpIiVSQDg~~~~~~~vi~~-y~~-~v~~i~~~~~~~i~~~-~~~~ 167 (434)
T PF03071_consen 93 PVIPVLVFACN--RPDYLRRTLDSLLKYRPSAEKFPIIVSQDGDDEEVAEVIKS-YGD-QVTYIQHPDFSPITIP-PKEK 167 (434)
T ss_dssp ----EEEEESS---TT-HHHHHHHHHHH-S-TTTS-EEEEE-TT-HHHHHHHHG-GGG-GSEEEE-S--S------TT-G
T ss_pred CcceEEEEecC--CcHHHHHHHHHHHHcCCCCCCccEEEEecCCcHHHHHHHHH-hhh-hheeeecCCcCCceeC-cccc
Confidence 446665 4555 44445578899999876545566666667666555555543 421 122 222222211111 1100
Q ss_pred -HhhccCchhhHHHhhhhhccc-ccCeEEEEecceEEeccHHHHHh
Q 018535 142 -RQALDQPLNYARIYLADIMPA-NVKRVIYLDSDLVVVDDIGKLWD 185 (354)
Q Consensus 142 -~~~~~s~~~y~Rl~i~~llp~-~~dRvLYLD~D~IV~~Dl~eL~~ 185 (354)
...+.....-+|.-+-.++.. .+++||-|.-|+.+--|.-+-|+
T Consensus 168 ~~~~y~~IA~HYk~aL~~vF~~~~~~~vIIlEDDL~isPDFf~Yf~ 213 (434)
T PF03071_consen 168 KFKGYYKIARHYKWALSQVFNKFKYSSVIILEDDLEISPDFFEYFS 213 (434)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHTS--SEEEEEETTEEE-TTHHHHHH
T ss_pred cccchHHHHHHHHHHHHHHHHhcCCceEEEEecCcccCccHHHHHH
Confidence 001111223445556666642 47999999999999999877654
No 46
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=67.59 E-value=44 Score=35.93 Aligned_cols=119 Identities=14% Similarity=0.221 Sum_probs=65.0
Q ss_pred CceEEEEE-eCcch---hhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHH-------HHHHHhhCCcceEEEEEecc-c
Q 018535 64 QTIHITMT-LDANY---LRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDV-------YSSINSTFPYLNLKVYKFDS-N 131 (354)
Q Consensus 64 ~~i~I~~~-~D~~y---l~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~-------~~~L~~~~~~~~i~~~~~~~-~ 131 (354)
.++.|++. +++.- ...+.+++.|+...+. +.+++|+|+.|+.+++. .+.+.+.++. ..+++.... .
T Consensus 124 ~~VaVliP~yNEd~~~v~~~L~a~~~Sl~~~~~-~~~~e~~vLdD~~d~~~~~~e~~~~~~L~~~~~~-~~~i~yr~R~~ 201 (691)
T PRK05454 124 ARTAILMPIYNEDPARVFAGLRAMYESLAATGH-GAHFDFFILSDTRDPDIAAAEEAAWLELRAELGG-EGRIFYRRRRR 201 (691)
T ss_pred CceEEEEeCCCCChHHHHHHHHHHHHHHHhcCC-CCCEEEEEEECCCChhHHHHHHHHHHHHHHhcCC-CCcEEEEECCc
Confidence 56777774 44432 2456777888887544 35799999999876542 1234444432 222332221 1
Q ss_pred ccccccchhHHhhccCchhhHHHhhhhhcccccCeEEEEecceEEecc-HHHHHhcCCCCCeEEeec
Q 018535 132 RVRGKISKSIRQALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDD-IGKLWDVDLEGRVLAAPE 197 (354)
Q Consensus 132 ~~~~~is~~~~~~~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~D-l~eL~~~dl~g~~iAAv~ 197 (354)
....|. .++ ..+.|.+ ...+|-++-||+|++..+| +..|...-..+.-+|++.
T Consensus 202 n~~~Ka-----GNl---~~~~~~~-----~~~~eyivvLDADs~m~~d~L~~lv~~m~~dP~vGlVQ 255 (691)
T PRK05454 202 NVGRKA-----GNI---ADFCRRW-----GGAYDYMVVLDADSLMSGDTLVRLVRLMEANPRAGLIQ 255 (691)
T ss_pred CCCccH-----HHH---HHHHHhc-----CCCcCEEEEEcCCCCCCHHHHHHHHHHHhhCcCEEEEe
Confidence 111110 011 1233322 1368999999999999988 566664322233466665
No 47
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=67.21 E-value=13 Score=33.88 Aligned_cols=24 Identities=21% Similarity=0.358 Sum_probs=19.9
Q ss_pred ccCeEEEEecceEEecc-HHHHHhc
Q 018535 163 NVKRVIYLDSDLVVVDD-IGKLWDV 186 (354)
Q Consensus 163 ~~dRvLYLD~D~IV~~D-l~eL~~~ 186 (354)
..|-|+.+|+|+++..| |.+|...
T Consensus 73 ~~e~i~~~DaD~~~~~~~l~~l~~~ 97 (244)
T cd04190 73 DPEFILLVDADTKFDPDSIVQLYKA 97 (244)
T ss_pred CCCEEEEECCCCcCCHhHHHHHHHH
Confidence 57999999999999887 6777653
No 48
>PF04488 Gly_transf_sug: Glycosyltransferase sugar-binding region containing DXD motif ; InterPro: IPR007577 This entry represents those sugar-binding regions of glycosyltransferases that contain a DXD motif. The DXD motif is a short conserved motif found in many families of glycosyltransferases, which add a range of different sugars to other sugars, phosphates and proteins. DXD-containing glycosyltransferases all use nucleoside diphosphate sugars as donors and require divalent cations, usually manganese. The DXD motif is expected to play a carbohydrate binding role in sugar-nucleoside diphosphate and manganese dependent glycosyltransferases [].
Probab=66.82 E-value=3 Score=32.93 Aligned_cols=31 Identities=19% Similarity=0.251 Sum_probs=24.1
Q ss_pred hhhHHHhhhhhcccccCeEEEEecceEEeccH-HHHH
Q 018535 149 LNYARIYLADIMPANVKRVIYLDSDLVVVDDI-GKLW 184 (354)
Q Consensus 149 ~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~Dl-~eL~ 184 (354)
.-++|+.+=.... =||+|.|+++.+++ +++-
T Consensus 66 sD~~R~~~L~~~G-----GiY~D~D~~~~rpl~~~~~ 97 (103)
T PF04488_consen 66 SDLLRYLVLYKYG-----GIYLDLDVICLRPLDDPWL 97 (103)
T ss_pred HHHHHHHHHHHcC-----cEEEeCccccCcchhhhhh
Confidence 3578887665554 49999999999999 6664
No 49
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=66.64 E-value=64 Score=28.93 Aligned_cols=104 Identities=12% Similarity=0.033 Sum_probs=52.9
Q ss_pred eEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHHhhCCcceEEEEEecccccccccchhHHhhc
Q 018535 66 IHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTFPYLNLKVYKFDSNRVRGKISKSIRQAL 145 (354)
Q Consensus 66 i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~~~~~~~~i~~~~~~~~~~~~~is~~~~~~~ 145 (354)
+-|++.+- |--..+.-++.|+.+.+-.+..+.+.|+.++.+++..+.+++.-....+++..+....-.++ .
T Consensus 3 vsIiIp~~-Ne~~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~i~~~~~~~~~~~i~~~~~~~~~G~-~------- 73 (241)
T cd06427 3 YTILVPLY-KEAEVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIAAARALRLPSIFRVVVVPPSQPRTK-P------- 73 (241)
T ss_pred EEEEEecC-CcHHHHHHHHHHHHhCcCCcccEEEEEEECCCCchHHHHHHHhccCCCeeEEEecCCCCCch-H-------
Confidence 55666553 22356778999998754322447777777766554444444321101233333322110111 1
Q ss_pred cCchhhHHHhhhhhcccccCeEEEEecceEEec-cHHHHHh
Q 018535 146 DQPLNYARIYLADIMPANVKRVIYLDSDLVVVD-DIGKLWD 185 (354)
Q Consensus 146 ~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~-Dl~eL~~ 185 (354)
.++-..-+.- .-|-|+++|+|+++-. .|.++..
T Consensus 74 -----~a~n~g~~~a--~gd~i~~~DaD~~~~~~~l~~~~~ 107 (241)
T cd06427 74 -----KACNYALAFA--RGEYVVIYDAEDAPDPDQLKKAVA 107 (241)
T ss_pred -----HHHHHHHHhc--CCCEEEEEcCCCCCChHHHHHHHH
Confidence 1111111122 3589999999988774 4555554
No 50
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=65.63 E-value=47 Score=31.04 Aligned_cols=91 Identities=19% Similarity=0.173 Sum_probs=48.3
Q ss_pred hhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHH-----hhCCcceEEEEEecccccccccchhHHhhccCchhh
Q 018535 77 LRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSIN-----STFPYLNLKVYKFDSNRVRGKISKSIRQALDQPLNY 151 (354)
Q Consensus 77 l~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~-----~~~~~~~i~~~~~~~~~~~~~is~~~~~~~~s~~~y 151 (354)
...+..++.||+.++.......+.|+.++.++.....+. ...+ .+++...+.. .+ . .-
T Consensus 11 ~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~~~~~~~~~--~v~vi~~~~n--~G-~------------~~ 73 (299)
T cd02510 11 LSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEYYKKYLP--KVKVLRLKKR--EG-L------------IR 73 (299)
T ss_pred HHHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHHHHHhhcCC--cEEEEEcCCC--CC-H------------HH
Confidence 377778999999877532234666666665443222221 1222 3444432211 11 1 11
Q ss_pred HHHhhhhhcccccCeEEEEecceEEe-ccHHHHHhc
Q 018535 152 ARIYLADIMPANVKRVIYLDSDLVVV-DDIGKLWDV 186 (354)
Q Consensus 152 ~Rl~i~~llp~~~dRvLYLD~D~IV~-~Dl~eL~~~ 186 (354)
+|-..-..- .-+-|++||+|+++. +-|.+|.+.
T Consensus 74 a~N~g~~~A--~gd~i~fLD~D~~~~~~wL~~ll~~ 107 (299)
T cd02510 74 ARIAGARAA--TGDVLVFLDSHCEVNVGWLEPLLAR 107 (299)
T ss_pred HHHHHHHHc--cCCEEEEEeCCcccCccHHHHHHHH
Confidence 122222222 348999999999986 445666653
No 51
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=62.13 E-value=95 Score=26.62 Aligned_cols=89 Identities=15% Similarity=0.204 Sum_probs=48.6
Q ss_pred hhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHH---HHHHHHhhCCcceEEEEEecccccccccchhHHhhccCchhhHHH
Q 018535 78 RGTMAAVLSILQHSTCPQNIEFHFLYSNFEPD---VYSSINSTFPYLNLKVYKFDSNRVRGKISKSIRQALDQPLNYARI 154 (354)
Q Consensus 78 ~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~---~~~~L~~~~~~~~i~~~~~~~~~~~~~is~~~~~~~~s~~~y~Rl 154 (354)
..+..++.|++..+. ..+.+.|+.++.+++ +.+.+...++ ..+.++..+.. . +... +...-
T Consensus 11 ~~l~~~l~sl~~q~~--~~~eiiVvddgS~d~t~~~~~~~~~~~~-~~~~~~~~~~~-----~--G~~~------~~n~g 74 (214)
T cd04196 11 KYLREQLDSILAQTY--KNDELIISDDGSTDGTVEIIKEYIDKDP-FIIILIRNGKN-----L--GVAR------NFESL 74 (214)
T ss_pred HHHHHHHHHHHhCcC--CCeEEEEEeCCCCCCcHHHHHHHHhcCC-ceEEEEeCCCC-----c--cHHH------HHHHH
Confidence 556788999988754 257888887766443 3333333333 12332221110 0 1000 11111
Q ss_pred hhhhhcccccCeEEEEecceEEecc-HHHHHhc
Q 018535 155 YLADIMPANVKRVIYLDSDLVVVDD-IGKLWDV 186 (354)
Q Consensus 155 ~i~~llp~~~dRvLYLD~D~IV~~D-l~eL~~~ 186 (354)
-. .. .-+-|++||+|.+...+ |..+.+.
T Consensus 75 --~~-~~-~g~~v~~ld~Dd~~~~~~l~~~~~~ 103 (214)
T cd04196 75 --LQ-AA-DGDYVFFCDQDDIWLPDKLERLLKA 103 (214)
T ss_pred --HH-hC-CCCEEEEECCCcccChhHHHHHHHH
Confidence 11 12 46899999999887755 8888876
No 52
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=61.98 E-value=1.1e+02 Score=28.41 Aligned_cols=35 Identities=17% Similarity=0.125 Sum_probs=26.0
Q ss_pred ccCeEEEEecceEEecc-HHHHHhcCCCCCeEEeec
Q 018535 163 NVKRVIYLDSDLVVVDD-IGKLWDVDLEGRVLAAPE 197 (354)
Q Consensus 163 ~~dRvLYLD~D~IV~~D-l~eL~~~dl~g~~iAAv~ 197 (354)
..+-++.+|+|+++..| |..+...-..+.-+|++.
T Consensus 95 ~~~~i~~~DaD~~~~p~~l~~~v~~~~~~~~vg~vq 130 (254)
T cd04191 95 RYDYMVVLDADSLMSGDTIVRLVRRMEANPRAGIIQ 130 (254)
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHHhCCCEEEEe
Confidence 57899999999999966 777776433344567765
No 53
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=57.11 E-value=1.3e+02 Score=25.95 Aligned_cols=104 Identities=15% Similarity=0.169 Sum_probs=53.8
Q ss_pred eEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHH---HHHHHHhhCCcceEEEEEecccccccccchhHH
Q 018535 66 IHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPD---VYSSINSTFPYLNLKVYKFDSNRVRGKISKSIR 142 (354)
Q Consensus 66 i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~---~~~~L~~~~~~~~i~~~~~~~~~~~~~is~~~~ 142 (354)
+-|++.+- |....+..++.|+++..- .++.+.|+.++.+++ ..+.+...++..+++++..+... + .+...
T Consensus 3 vsviip~~-n~~~~l~~~L~sl~~q~~--~~~eiivVdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~--g-~~~~~- 75 (196)
T cd02520 3 VSILKPLC-GVDPNLYENLESFFQQDY--PKYEILFCVQDEDDPAIPVVRKLIAKYPNVDARLLIGGEKV--G-INPKV- 75 (196)
T ss_pred eEEEEecC-CCCccHHHHHHHHHhccC--CCeEEEEEeCCCcchHHHHHHHHHHHCCCCcEEEEecCCcC--C-CCHhH-
Confidence 55666554 234456788999987653 237777777766543 22333344565555554432211 1 10000
Q ss_pred hhccCchhhHHHhhhhhcccccCeEEEEecceEEecc-HHHHHhc
Q 018535 143 QALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDD-IGKLWDV 186 (354)
Q Consensus 143 ~~~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~D-l~eL~~~ 186 (354)
.+.. ..+. . . ..|-++++|+|+++..+ |.+|.+.
T Consensus 76 ------~~~n-~g~~-~-a-~~d~i~~~D~D~~~~~~~l~~l~~~ 110 (196)
T cd02520 76 ------NNLI-KGYE-E-A-RYDILVISDSDISVPPDYLRRMVAP 110 (196)
T ss_pred ------HHHH-HHHH-h-C-CCCEEEEECCCceEChhHHHHHHHH
Confidence 0110 1111 1 1 46899999999987543 4545443
No 54
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=56.90 E-value=1.1e+02 Score=26.87 Aligned_cols=102 Identities=15% Similarity=0.050 Sum_probs=52.5
Q ss_pred eEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHHhhCC-cceEEEEEecccccccccchhHHhh
Q 018535 66 IHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTFP-YLNLKVYKFDSNRVRGKISKSIRQA 144 (354)
Q Consensus 66 i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~~~~~-~~~i~~~~~~~~~~~~~is~~~~~~ 144 (354)
+.|++.+= |-...+.-++.|+.+....+.++.+.|+.++.+++..+.+++... ...+++.. +.. .+ ..
T Consensus 2 ~sIiip~~-n~~~~l~~~l~sl~~q~~~~~~~evivvd~~s~d~~~~~~~~~~~~~~~v~~i~-~~~--~~-~~------ 70 (249)
T cd02525 2 VSIIIPVR-NEEKYIEELLESLLNQSYPKDLIEIIVVDGGSTDGTREIVQEYAAKDPRIRLID-NPK--RI-QS------ 70 (249)
T ss_pred EEEEEEcC-CchhhHHHHHHHHHhccCCCCccEEEEEeCCCCccHHHHHHHHHhcCCeEEEEe-CCC--CC-ch------
Confidence 44555443 223556778899987654334577777766655443444433211 11233332 111 01 11
Q ss_pred ccCchhhHHHhhhhhcccccCeEEEEecceEEecc-HHHHHhc
Q 018535 145 LDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDD-IGKLWDV 186 (354)
Q Consensus 145 ~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~D-l~eL~~~ 186 (354)
.++-..-+.. ..|-++++|+|.++..+ |..+.+.
T Consensus 71 ------~a~N~g~~~a--~~d~v~~lD~D~~~~~~~l~~~~~~ 105 (249)
T cd02525 71 ------AGLNIGIRNS--RGDIIIRVDAHAVYPKDYILELVEA 105 (249)
T ss_pred ------HHHHHHHHHh--CCCEEEEECCCccCCHHHHHHHHHH
Confidence 1122222222 46899999999988644 6666643
No 55
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=53.13 E-value=2.2e+02 Score=27.44 Aligned_cols=23 Identities=35% Similarity=0.437 Sum_probs=17.0
Q ss_pred cCeEEEEecceEEe-ccHHHHHhc
Q 018535 164 VKRVIYLDSDLVVV-DDIGKLWDV 186 (354)
Q Consensus 164 ~dRvLYLD~D~IV~-~Dl~eL~~~ 186 (354)
-+-|+++|+|.... +++..|.+.
T Consensus 163 gd~I~~~DaD~~~~~~~l~~l~~~ 186 (333)
T PTZ00260 163 GKYILMVDADGATDIDDFDKLEDI 186 (333)
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHH
Confidence 47899999997654 566777653
No 56
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=52.64 E-value=1e+02 Score=26.37 Aligned_cols=99 Identities=11% Similarity=0.005 Sum_probs=49.7
Q ss_pred EEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHHhhCCcceEEEEEecccccccccchhHHhhccCc
Q 018535 69 TMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTFPYLNLKVYKFDSNRVRGKISKSIRQALDQP 148 (354)
Q Consensus 69 ~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~~~~~~~~i~~~~~~~~~~~~~is~~~~~~~~s~ 148 (354)
+.+.++. ..+.-++.||.+.+.. ...+.|+.++.++...+.+++.....++++...+.. .+ ....
T Consensus 3 I~~~n~~--~~l~~~l~sl~~q~~~--~~eiiivD~~s~d~t~~~~~~~~~~~~i~~~~~~~n--~g-~~~~-------- 67 (202)
T cd04185 3 VVTYNRL--DLLKECLDALLAQTRP--PDHIIVIDNASTDGTAEWLTSLGDLDNIVYLRLPEN--LG-GAGG-------- 67 (202)
T ss_pred EEeeCCH--HHHHHHHHHHHhccCC--CceEEEEECCCCcchHHHHHHhcCCCceEEEECccc--cc-hhhH--------
Confidence 3444432 4567788999876542 356666666555444444544332222333332211 01 1111
Q ss_pred hhhHHHhhhhhcccccCeEEEEecceEEeccH-HHHHh
Q 018535 149 LNYARIYLADIMPANVKRVIYLDSDLVVVDDI-GKLWD 185 (354)
Q Consensus 149 ~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~Dl-~eL~~ 185 (354)
.+...-.+ .....|-++++|+|.++..+. .+|.+
T Consensus 68 ~n~~~~~a---~~~~~d~v~~ld~D~~~~~~~l~~l~~ 102 (202)
T cd04185 68 FYEGVRRA---YELGYDWIWLMDDDAIPDPDALEKLLA 102 (202)
T ss_pred HHHHHHHH---hccCCCEEEEeCCCCCcChHHHHHHHH
Confidence 01111111 123579999999999998553 44444
No 57
>PRK15383 type III secretion system protein; Provisional
Probab=52.57 E-value=8.7 Score=35.47 Aligned_cols=23 Identities=39% Similarity=0.758 Sum_probs=20.1
Q ss_pred CeEEEEecceEEeccHHHHHhcC
Q 018535 165 KRVIYLDSDLVVVDDIGKLWDVD 187 (354)
Q Consensus 165 dRvLYLD~D~IV~~Dl~eL~~~d 187 (354)
+-+||||+|||+.+.|--|+.-|
T Consensus 220 ~GCIYLD~DMilT~KLG~ly~PD 242 (335)
T PRK15383 220 GGCIYLDADMLLTDKLGTLYLPD 242 (335)
T ss_pred CceEEeecceeeecccccEEcCC
Confidence 67999999999999999888655
No 58
>PRK15384 type III secretion system protein; Provisional
Probab=52.56 E-value=8.2 Score=35.62 Aligned_cols=23 Identities=30% Similarity=0.752 Sum_probs=20.1
Q ss_pred CeEEEEecceEEeccHHHHHhcC
Q 018535 165 KRVIYLDSDLVVVDDIGKLWDVD 187 (354)
Q Consensus 165 dRvLYLD~D~IV~~Dl~eL~~~d 187 (354)
+-+||||+|||+.+.|--|+.-|
T Consensus 217 ~GCIYLDaDMilT~KLG~ly~PD 239 (336)
T PRK15384 217 SGCIYLDADMIITEKLGGIYIPD 239 (336)
T ss_pred CceEEeeccceeecccccEEcCC
Confidence 67999999999999999888555
No 59
>PRK15382 non-LEE encoded effector protein NleB; Provisional
Probab=52.11 E-value=8.9 Score=35.41 Aligned_cols=23 Identities=39% Similarity=0.856 Sum_probs=20.2
Q ss_pred CeEEEEecceEEeccHHHHHhcC
Q 018535 165 KRVIYLDSDLVVVDDIGKLWDVD 187 (354)
Q Consensus 165 dRvLYLD~D~IV~~Dl~eL~~~d 187 (354)
+-+||||+|||+.+.|--|+.-|
T Consensus 212 ~GCIYLD~DMilT~KLG~ly~PD 234 (326)
T PRK15382 212 EGCIYLDADMIITDKLGVLYAPD 234 (326)
T ss_pred CceEEeecceeeecccccEEcCC
Confidence 67999999999999999888555
No 60
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=52.02 E-value=2.1e+02 Score=28.66 Aligned_cols=100 Identities=17% Similarity=0.210 Sum_probs=54.8
Q ss_pred CceEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHH---HHHHhhCCcceEEEEEecccccccccchh
Q 018535 64 QTIHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVY---SSINSTFPYLNLKVYKFDSNRVRGKISKS 140 (354)
Q Consensus 64 ~~i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~---~~L~~~~~~~~i~~~~~~~~~~~~~is~~ 140 (354)
..+.|++.+=+. ...+..++.|+++.+- .++++.++.|+.+++.. +.+.+.++. +++.....+ .++ ...
T Consensus 75 p~vsViIP~yNE-~~~i~~~l~sll~q~y--p~~eIivVdDgs~D~t~~~~~~~~~~~~~--v~vv~~~~n--~Gk-a~A 146 (444)
T PRK14583 75 PLVSILVPCFNE-GLNARETIHAALAQTY--TNIEVIAINDGSSDDTAQVLDALLAEDPR--LRVIHLAHN--QGK-AIA 146 (444)
T ss_pred CcEEEEEEeCCC-HHHHHHHHHHHHcCCC--CCeEEEEEECCCCccHHHHHHHHHHhCCC--EEEEEeCCC--CCH-HHH
Confidence 457777754422 2446788899887654 24888888877654322 223333443 444432211 111 000
Q ss_pred HHhhccCchhhHHHhhhhhcccccCeEEEEecceEEecc-HHHHHh
Q 018535 141 IRQALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDD-IGKLWD 185 (354)
Q Consensus 141 ~~~~~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~D-l~eL~~ 185 (354)
.++. +. .. ..|-++.+|+|.++..| +.++..
T Consensus 147 --------lN~g---l~--~a-~~d~iv~lDAD~~~~~d~L~~lv~ 178 (444)
T PRK14583 147 --------LRMG---AA--AA-RSEYLVCIDGDALLDKNAVPYLVA 178 (444)
T ss_pred --------HHHH---HH--hC-CCCEEEEECCCCCcCHHHHHHHHH
Confidence 1111 11 12 47999999999999866 455544
No 61
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=51.75 E-value=1.4e+02 Score=24.88 Aligned_cols=90 Identities=17% Similarity=0.084 Sum_probs=48.0
Q ss_pred hhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHH---hhCCcceEEEEEecccccccccchhHHhhccCchhhHHH
Q 018535 78 RGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSIN---STFPYLNLKVYKFDSNRVRGKISKSIRQALDQPLNYARI 154 (354)
Q Consensus 78 ~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~---~~~~~~~i~~~~~~~~~~~~~is~~~~~~~~s~~~y~Rl 154 (354)
..+.-++.|+.+.........+.|+.++.+++....++ ..++. ++++..... .+ . ..++-
T Consensus 10 ~~l~~~l~sl~~~~~~~~~~eiivvd~~s~d~~~~~~~~~~~~~~~--~~~~~~~~n--~G-~------------~~a~n 72 (185)
T cd04179 10 ENIPELVERLLAVLEEGYDYEIIVVDDGSTDGTAEIARELAARVPR--VRVIRLSRN--FG-K------------GAAVR 72 (185)
T ss_pred hhHHHHHHHHHHHhccCCCEEEEEEcCCCCCChHHHHHHHHHhCCC--eEEEEccCC--CC-c------------cHHHH
Confidence 55677888888875422346777776665433333332 33432 233332211 11 1 11222
Q ss_pred hhhhhcccccCeEEEEecceEEecc-HHHHHhc
Q 018535 155 YLADIMPANVKRVIYLDSDLVVVDD-IGKLWDV 186 (354)
Q Consensus 155 ~i~~llp~~~dRvLYLD~D~IV~~D-l~eL~~~ 186 (354)
..-+... -|-++.||+|.++..+ |.+|...
T Consensus 73 ~g~~~a~--gd~i~~lD~D~~~~~~~l~~l~~~ 103 (185)
T cd04179 73 AGFKAAR--GDIVVTMDADLQHPPEDIPKLLEK 103 (185)
T ss_pred HHHHHhc--CCEEEEEeCCCCCCHHHHHHHHHH
Confidence 2222222 2789999999888765 7778875
No 62
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=51.68 E-value=1.4e+02 Score=24.86 Aligned_cols=93 Identities=13% Similarity=0.105 Sum_probs=47.5
Q ss_pred hhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHHhhCCcceEEEEEe-cccccccccchhHHhhccCchhhHHHh
Q 018535 77 LRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTFPYLNLKVYKF-DSNRVRGKISKSIRQALDQPLNYARIY 155 (354)
Q Consensus 77 l~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~~~~~~~~i~~~~~-~~~~~~~~is~~~~~~~~s~~~y~Rl~ 155 (354)
...+.-++.|+.+.+. .+..+.|+.++.+....+.+++........+..+ ..+ ..... +.++-.
T Consensus 9 ~~~l~~~l~sl~~q~~--~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~---~~~~~----------~~~~n~ 73 (182)
T cd06420 9 PEALELVLKSVLNQSI--LPFEVIIADDGSTEETKELIEEFKSQFPIPIKHVWQED---EGFRK----------AKIRNK 73 (182)
T ss_pred hHHHHHHHHHHHhccC--CCCEEEEEeCCCchhHHHHHHHHHhhcCCceEEEEcCC---cchhH----------HHHHHH
Confidence 3456788999988764 3467777777665544444432211001111111 111 01110 111211
Q ss_pred hhhhcccccCeEEEEecceEEecc-HHHHHhc
Q 018535 156 LADIMPANVKRVIYLDSDLVVVDD-IGKLWDV 186 (354)
Q Consensus 156 i~~llp~~~dRvLYLD~D~IV~~D-l~eL~~~ 186 (354)
.-+.- .-+-+++||+|.++..+ |..+.+.
T Consensus 74 g~~~a--~g~~i~~lD~D~~~~~~~l~~~~~~ 103 (182)
T cd06420 74 AIAAA--KGDYLIFIDGDCIPHPDFIADHIEL 103 (182)
T ss_pred HHHHh--cCCEEEEEcCCcccCHHHHHHHHHH
Confidence 12222 35899999999999866 5666654
No 63
>PRK11204 N-glycosyltransferase; Provisional
Probab=51.63 E-value=1.4e+02 Score=29.43 Aligned_cols=101 Identities=14% Similarity=0.205 Sum_probs=55.5
Q ss_pred CceEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHH---HHHHhhCCcceEEEEEecccccccccchh
Q 018535 64 QTIHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVY---SSINSTFPYLNLKVYKFDSNRVRGKISKS 140 (354)
Q Consensus 64 ~~i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~---~~L~~~~~~~~i~~~~~~~~~~~~~is~~ 140 (354)
..+.|++.+=+. ...+..++.|+++.+- .++++.|+.|+.+++.. +.+.+.+++ +++.....+ .++ ...
T Consensus 54 p~vsViIp~yne-~~~i~~~l~sl~~q~y--p~~eiiVvdD~s~d~t~~~l~~~~~~~~~--v~~i~~~~n--~Gk-a~a 125 (420)
T PRK11204 54 PGVSILVPCYNE-GENVEETISHLLALRY--PNYEVIAINDGSSDNTGEILDRLAAQIPR--LRVIHLAEN--QGK-ANA 125 (420)
T ss_pred CCEEEEEecCCC-HHHHHHHHHHHHhCCC--CCeEEEEEECCCCccHHHHHHHHHHhCCc--EEEEEcCCC--CCH-HHH
Confidence 467777754322 3556778889887543 25788888877654332 333334443 333332211 111 000
Q ss_pred HHhhccCchhhHHHhhhhhcccccCeEEEEecceEEecc-HHHHHhc
Q 018535 141 IRQALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDD-IGKLWDV 186 (354)
Q Consensus 141 ~~~~~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~D-l~eL~~~ 186 (354)
. +.. + +. . ..|-++.+|+|.++..| +.++.+.
T Consensus 126 l--------n~g---~-~~-a-~~d~i~~lDaD~~~~~d~L~~l~~~ 158 (420)
T PRK11204 126 L--------NTG---A-AA-A-RSEYLVCIDGDALLDPDAAAYMVEH 158 (420)
T ss_pred H--------HHH---H-HH-c-CCCEEEEECCCCCCChhHHHHHHHH
Confidence 0 111 1 11 1 47999999999999866 5666553
No 64
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=51.27 E-value=98 Score=26.41 Aligned_cols=99 Identities=19% Similarity=0.141 Sum_probs=53.1
Q ss_pred eEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcH-HHHHHHH---hhCCcceEEEEEecccccccccchhH
Q 018535 66 IHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEP-DVYSSIN---STFPYLNLKVYKFDSNRVRGKISKSI 141 (354)
Q Consensus 66 i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~-~~~~~L~---~~~~~~~i~~~~~~~~~~~~~is~~~ 141 (354)
+-|++.+-..-+..+..++.||++.+. ..+.+.|+.++.+. .....++ ...+ .+++...... ..+
T Consensus 3 vsiii~~~n~~~~~l~~~l~sl~~q~~--~~~eiivvd~gs~d~~~~~~~~~~~~~~~--~~~~~~~~~~---~g~---- 71 (202)
T cd04184 3 ISIVMPVYNTPEKYLREAIESVRAQTY--PNWELCIADDASTDPEVKRVLKKYAAQDP--RIKVVFREEN---GGI---- 71 (202)
T ss_pred EEEEEecccCcHHHHHHHHHHHHhCcC--CCeEEEEEeCCCCChHHHHHHHHHHhcCC--CEEEEEcccC---CCH----
Confidence 556665544445778899999998764 34677767666543 2222222 2222 2333322111 001
Q ss_pred HhhccCchhhHHHhhhhhcccccCeEEEEecceEEecc-HHHHHh
Q 018535 142 RQALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDD-IGKLWD 185 (354)
Q Consensus 142 ~~~~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~D-l~eL~~ 185 (354)
..++-..-... .-+-++++|+|.++..| +..+.+
T Consensus 72 --------~~a~n~g~~~a--~~d~i~~ld~D~~~~~~~l~~~~~ 106 (202)
T cd04184 72 --------SAATNSALELA--TGEFVALLDHDDELAPHALYEVVK 106 (202)
T ss_pred --------HHHHHHHHHhh--cCCEEEEECCCCcCChHHHHHHHH
Confidence 12222222222 24899999999998765 555554
No 65
>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function.
Probab=50.49 E-value=12 Score=33.81 Aligned_cols=23 Identities=39% Similarity=0.745 Sum_probs=19.5
Q ss_pred hhhhcccccCeEEEEecceEEecc
Q 018535 156 LADIMPANVKRVIYLDSDLVVVDD 179 (354)
Q Consensus 156 i~~llp~~~dRvLYLD~D~IV~~D 179 (354)
+..+|| +++-||+||+|+-|...
T Consensus 35 va~~L~-~~~~vlflDaDigVvNp 57 (222)
T PF03314_consen 35 VAKILP-EYDWVLFLDADIGVVNP 57 (222)
T ss_pred HHHHhc-cCCEEEEEcCCceeecC
Confidence 566788 69999999999998855
No 66
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=50.26 E-value=1.6e+02 Score=28.64 Aligned_cols=100 Identities=17% Similarity=0.249 Sum_probs=55.4
Q ss_pred CceEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcH---HHHHHHHhhCCcceEEEEEecccccccccchh
Q 018535 64 QTIHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEP---DVYSSINSTFPYLNLKVYKFDSNRVRGKISKS 140 (354)
Q Consensus 64 ~~i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~---~~~~~L~~~~~~~~i~~~~~~~~~~~~~is~~ 140 (354)
..+-|++.+= |-...+.-++.|+.+..-. ++.+.++.++.++ +..+.+.+.+|+.++++.. +... .+ .+..
T Consensus 41 p~VSViiP~~-nee~~l~~~L~Sl~~q~Yp--~~EIivvdd~s~D~t~~iv~~~~~~~p~~~i~~v~-~~~~-~G-~~~K 114 (373)
T TIGR03472 41 PPVSVLKPLH-GDEPELYENLASFCRQDYP--GFQMLFGVQDPDDPALAVVRRLRADFPDADIDLVI-DARR-HG-PNRK 114 (373)
T ss_pred CCeEEEEECC-CCChhHHHHHHHHHhcCCC--CeEEEEEeCCCCCcHHHHHHHHHHhCCCCceEEEE-CCCC-CC-CChH
Confidence 4577777643 3344567888999886542 3777665554433 3444555667776665542 2221 11 1111
Q ss_pred HHhhccCchhhHHHhhhhhcccccCeEEEEecceEEeccH
Q 018535 141 IRQALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDDI 180 (354)
Q Consensus 141 ~~~~~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~Dl 180 (354)
. .+.... +.. ...|-++++|+|+++..|-
T Consensus 115 ~-------~~l~~~-~~~---a~ge~i~~~DaD~~~~p~~ 143 (373)
T TIGR03472 115 V-------SNLINM-LPH---ARHDILVIADSDISVGPDY 143 (373)
T ss_pred H-------HHHHHH-HHh---ccCCEEEEECCCCCcChhH
Confidence 0 111121 222 1468999999999997553
No 67
>PRK10063 putative glycosyl transferase; Provisional
Probab=49.33 E-value=1.8e+02 Score=26.56 Aligned_cols=99 Identities=12% Similarity=0.110 Sum_probs=48.2
Q ss_pred eEEEEEeCcchhhhHHHHHHHHHHhcC-CCCcEEEEEEeCCCcHHHHHHHHhhCCcceEEEEEecccccccccchhHHhh
Q 018535 66 IHITMTLDANYLRGTMAAVLSILQHST-CPQNIEFHFLYSNFEPDVYSSINSTFPYLNLKVYKFDSNRVRGKISKSIRQA 144 (354)
Q Consensus 66 i~I~~~~D~~yl~~~~v~i~Si~~~~~-~~~~~~fhil~~~~s~~~~~~L~~~~~~~~i~~~~~~~~~~~~~is~~~~~~ 144 (354)
+.|++.+= |-...+.-++.|+..... ...++.+.|+.++.++...+.+++.....++++.. ... .+ +..
T Consensus 3 vSVIi~~y-N~~~~l~~~l~sl~~~~~~~~~~~EiIVvDdgStD~t~~i~~~~~~~~~i~~i~--~~~-~G-~~~----- 72 (248)
T PRK10063 3 LSVITVAF-RNLEGIVKTHASLRHLAQDPGISFEWIVVDGGSNDGTREFLENLNGIFNLRFVS--EPD-NG-IYD----- 72 (248)
T ss_pred EEEEEEeC-CCHHHHHHHHHHHHHHHhCCCCCEEEEEEECcCcccHHHHHHHhcccCCEEEEE--CCC-CC-HHH-----
Confidence 55665443 234556677788764321 11346766666665554444444322111233332 110 11 111
Q ss_pred ccCchhhHHHhhhhhcccccCeEEEEecceEEeccHHHH
Q 018535 145 LDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDDIGKL 183 (354)
Q Consensus 145 ~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~Dl~eL 183 (354)
++-.--+.. .-+-|++||+|-++..+..++
T Consensus 73 -------A~N~Gi~~a--~g~~v~~ld~DD~~~~~~~~~ 102 (248)
T PRK10063 73 -------AMNKGIAMA--QGRFALFLNSGDIFHQDAANF 102 (248)
T ss_pred -------HHHHHHHHc--CCCEEEEEeCCcccCcCHHHH
Confidence 111111111 248999999998888775443
No 68
>CHL00031 psbT photosystem II protein T
Probab=47.95 E-value=28 Score=21.79 Aligned_cols=16 Identities=19% Similarity=0.470 Sum_probs=10.8
Q ss_pred cchHHHHHHHHHHHHH
Q 018535 3 TTSTFIFIGLLSLLLS 18 (354)
Q Consensus 3 ~~~~~~~~~~~~~~~~ 18 (354)
..-||++.+.+..+++
T Consensus 4 lvYtfll~~tlgilFF 19 (33)
T CHL00031 4 LVYTFLLVSTLGIIFF 19 (33)
T ss_pred hHHHHHHHHHHHHHHH
Confidence 3457777777766666
No 69
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=47.87 E-value=1.8e+02 Score=25.33 Aligned_cols=96 Identities=16% Similarity=0.131 Sum_probs=51.5
Q ss_pred hhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHH---HHHHHHhhCCcceEEEEEecccccccccchhHHhhccCchhhHH
Q 018535 77 LRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPD---VYSSINSTFPYLNLKVYKFDSNRVRGKISKSIRQALDQPLNYAR 153 (354)
Q Consensus 77 l~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~---~~~~L~~~~~~~~i~~~~~~~~~~~~~is~~~~~~~~s~~~y~R 153 (354)
...+..++.||+..+-. ..+.+.|+.++.++. ..+...+.++..++++.......-. +.+ ..++|
T Consensus 9 ~~~l~~~l~sl~~q~~~-~~~eiiVvDd~S~d~t~~i~~~~~~~~~~~~~~~~~~~~~~~~---~~G--------~~~a~ 76 (219)
T cd06913 9 EQWLDECLESVLQQDFE-GTLELSVFNDASTDKSAEIIEKWRKKLEDSGVIVLVGSHNSPS---PKG--------VGYAK 76 (219)
T ss_pred HHHHHHHHHHHHhCCCC-CCEEEEEEeCCCCccHHHHHHHHHHhCcccCeEEEEecccCCC---Ccc--------HHHHH
Confidence 45677888999886542 347777777765442 2232323333333443332211000 011 23555
Q ss_pred HhhhhhcccccCeEEEEecceEEec-cHHHHHhc
Q 018535 154 IYLADIMPANVKRVIYLDSDLVVVD-DIGKLWDV 186 (354)
Q Consensus 154 l~i~~llp~~~dRvLYLD~D~IV~~-Dl~eL~~~ 186 (354)
-...+.- .-+-+++||+|.++.. .+..+...
T Consensus 77 N~g~~~a--~gd~i~~lD~D~~~~~~~l~~~~~~ 108 (219)
T cd06913 77 NQAIAQS--SGRYLCFLDSDDVMMPQRIRLQYEA 108 (219)
T ss_pred HHHHHhc--CCCEEEEECCCccCChhHHHHHHHH
Confidence 5444433 3589999999987664 46666543
No 70
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=47.21 E-value=2e+02 Score=25.80 Aligned_cols=105 Identities=12% Similarity=0.026 Sum_probs=52.2
Q ss_pred CceEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcH---HHHHHHHhhCCcceEEEEEecccccccccchh
Q 018535 64 QTIHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEP---DVYSSINSTFPYLNLKVYKFDSNRVRGKISKS 140 (354)
Q Consensus 64 ~~i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~---~~~~~L~~~~~~~~i~~~~~~~~~~~~~is~~ 140 (354)
..+.|++.+= |....+..++.++.+.......+.+.|+.++.++ +..+.+.+.++...+.+..-..+ ...
T Consensus 9 ~~vsVvIp~y-ne~~~l~~~l~~l~~~~~~~~~~eiivvDdgS~D~t~~i~~~~~~~~~~~~v~~~~~~~n-----~G~- 81 (243)
T PLN02726 9 MKYSIIVPTY-NERLNIALIVYLIFKALQDVKDFEIIVVDDGSPDGTQDVVKQLQKVYGEDRILLRPRPGK-----LGL- 81 (243)
T ss_pred ceEEEEEccC-CchhhHHHHHHHHHHHhccCCCeEEEEEeCCCCCCHHHHHHHHHHhcCCCcEEEEecCCC-----CCH-
Confidence 3577777543 3334444556666554332235777777776544 33333434444333443321110 000
Q ss_pred HHhhccCchhhHHHhhhhhcccccCeEEEEecceEEe-ccHHHHHhc
Q 018535 141 IRQALDQPLNYARIYLADIMPANVKRVIYLDSDLVVV-DDIGKLWDV 186 (354)
Q Consensus 141 ~~~~~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~-~Dl~eL~~~ 186 (354)
..++-..-... .-+-++++|+|..+. +.|.+|++.
T Consensus 82 ---------~~a~n~g~~~a--~g~~i~~lD~D~~~~~~~l~~l~~~ 117 (243)
T PLN02726 82 ---------GTAYIHGLKHA--SGDFVVIMDADLSHHPKYLPSFIKK 117 (243)
T ss_pred ---------HHHHHHHHHHc--CCCEEEEEcCCCCCCHHHHHHHHHH
Confidence 01111111122 358999999999865 356677754
No 71
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=45.27 E-value=2.2e+02 Score=26.49 Aligned_cols=93 Identities=17% Similarity=0.168 Sum_probs=48.3
Q ss_pred hhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHHhhCCcceEE-EEEecccccccccchhHHhhccCchhhHHHhh
Q 018535 78 RGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTFPYLNLK-VYKFDSNRVRGKISKSIRQALDQPLNYARIYL 156 (354)
Q Consensus 78 ~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~~~~~~~~i~-~~~~~~~~~~~~is~~~~~~~~s~~~y~Rl~i 156 (354)
.-+...+.|+.+... +.++.|.|+.++.+.+....+++........ +...+.. ...++. +-+|-..
T Consensus 17 ~~l~~~l~~l~~~~~-~~~~eiIvvd~~s~~~~~~~l~~~~~~~~~~~~i~~~~~--~~~f~~----------a~arN~g 83 (281)
T PF10111_consen 17 ERLRNCLESLSQFQS-DPDFEIIVVDDGSSDEFDEELKKLCEKNGFIRYIRHEDN--GEPFSR----------AKARNIG 83 (281)
T ss_pred HHHHHHHHHHHhcCC-CCCEEEEEEECCCchhHHHHHHHHHhccCceEEEEcCCC--CCCcCH----------HHHHHHH
Confidence 345555777776544 3567777777666655434443332221222 2111111 011222 2334444
Q ss_pred hhhcccccCeEEEEecceEEecc-HHHHHh
Q 018535 157 ADIMPANVKRVIYLDSDLVVVDD-IGKLWD 185 (354)
Q Consensus 157 ~~llp~~~dRvLYLD~D~IV~~D-l~eL~~ 185 (354)
...- .-+-|+++|+|+++-.| |..+.+
T Consensus 84 ~~~A--~~d~l~flD~D~i~~~~~i~~~~~ 111 (281)
T PF10111_consen 84 AKYA--RGDYLIFLDADCIPSPDFIEKLLN 111 (281)
T ss_pred HHHc--CCCEEEEEcCCeeeCHHHHHHHHH
Confidence 4443 35899999999999844 455555
No 72
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=40.32 E-value=1.8e+02 Score=32.17 Aligned_cols=114 Identities=15% Similarity=0.061 Sum_probs=57.5
Q ss_pred CceEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHHhhCCcceEEEEEecccccccccchhHHh
Q 018535 64 QTIHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTFPYLNLKVYKFDSNRVRGKISKSIRQ 143 (354)
Q Consensus 64 ~~i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~~~~~~~~i~~~~~~~~~~~~~is~~~~~ 143 (354)
..+.|++.+=..-..-+..++.|++.-.-..++++++|+.|+.+++..+..++ . ++++..-+ +.-.++. +
T Consensus 260 P~VsViIPtYNE~~~vv~~tI~a~l~~dYP~~k~EViVVDDgS~D~t~~la~~-~---~v~yI~R~-~n~~gKA--G--- 329 (852)
T PRK11498 260 PTVDIFVPTYNEDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEFRQFAQE-V---GVKYIARP-THEHAKA--G--- 329 (852)
T ss_pred CcEEEEEecCCCcHHHHHHHHHHHHhccCCCCceEEEEEeCCCChHHHHHHHH-C---CcEEEEeC-CCCcchH--H---
Confidence 46888875532222223345666665432235689999988887766555443 2 23333211 1111110 0
Q ss_pred hccCchhhHHHhhhhhcccccCeEEEEecceEEeccHHH-HHhcCCCCCeEEeec
Q 018535 144 ALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDDIGK-LWDVDLEGRVLAAPE 197 (354)
Q Consensus 144 ~~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~Dl~e-L~~~dl~g~~iAAv~ 197 (354)
+ .|++ +.. . .-|-|+.+|+|.++..|.-+ +-..-.++.-+|++.
T Consensus 330 n----LN~a---L~~-a--~GEyIavlDAD~ip~pdfL~~~V~~f~~dP~VglVQ 374 (852)
T PRK11498 330 N----INNA---LKY-A--KGEFVAIFDCDHVPTRSFLQMTMGWFLKDKKLAMMQ 374 (852)
T ss_pred H----HHHH---HHh-C--CCCEEEEECCCCCCChHHHHHHHHHHHhCCCeEEEE
Confidence 0 0111 111 1 35899999999999876533 322212233356554
No 73
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=40.01 E-value=2.4e+02 Score=24.75 Aligned_cols=23 Identities=22% Similarity=0.359 Sum_probs=16.8
Q ss_pred ccCeEEEEecceEEecc-HHHHHh
Q 018535 163 NVKRVIYLDSDLVVVDD-IGKLWD 185 (354)
Q Consensus 163 ~~dRvLYLD~D~IV~~D-l~eL~~ 185 (354)
+.|-|+++|+|.++..| |.++..
T Consensus 84 ~~d~i~~lD~D~~~~~~~l~~l~~ 107 (236)
T cd06435 84 DAEIIAVIDADYQVEPDWLKRLVP 107 (236)
T ss_pred CCCEEEEEcCCCCcCHHHHHHHHH
Confidence 46899999999988744 444544
No 74
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=37.84 E-value=23 Score=27.92 Aligned_cols=23 Identities=43% Similarity=0.648 Sum_probs=11.4
Q ss_pred CCcchHHHHHHHHH-HHHHhcCCCC
Q 018535 1 MATTSTFIFIGLLS-LLLSASSAAP 24 (354)
Q Consensus 1 ~~~~~~~~~~~~~~-~~~~~~~~~~ 24 (354)
|| .-+|+|+++++ ++||++|.++
T Consensus 1 Ma-SK~~llL~l~LA~lLlisSeva 24 (95)
T PF07172_consen 1 MA-SKAFLLLGLLLAALLLISSEVA 24 (95)
T ss_pred Cc-hhHHHHHHHHHHHHHHHHhhhh
Confidence 67 34566666544 3334344333
No 75
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=37.77 E-value=2.3e+02 Score=23.91 Aligned_cols=92 Identities=16% Similarity=0.155 Sum_probs=45.9
Q ss_pred hhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHHhhCCcceEEEEEecccccccccchhHHhhccCchhhHHHh-h
Q 018535 78 RGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTFPYLNLKVYKFDSNRVRGKISKSIRQALDQPLNYARIY-L 156 (354)
Q Consensus 78 ~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~~~~~~~~i~~~~~~~~~~~~~is~~~~~~~~s~~~y~Rl~-i 156 (354)
..+..++.|+.+...+...+.+.|+.++.+++..+.+++ +.. . +.......-.+ . .+++-. +
T Consensus 10 ~~i~~~l~sl~~~~~p~~~~eiivvdd~s~D~t~~~~~~-~~~-~--~~~~~~~~~~g---k----------~~aln~g~ 72 (183)
T cd06438 10 AVIGNTVRSLKAQDYPRELYRIFVVADNCTDDTAQVARA-AGA-T--VLERHDPERRG---K----------GYALDFGF 72 (183)
T ss_pred HHHHHHHHHHHhcCCCCcccEEEEEeCCCCchHHHHHHH-cCC-e--EEEeCCCCCCC---H----------HHHHHHHH
Confidence 456677888876543223577777877765544444433 221 2 11111110001 1 111111 1
Q ss_pred hhhc--ccccCeEEEEecceEEecc-HHHHHhc
Q 018535 157 ADIM--PANVKRVIYLDSDLVVVDD-IGKLWDV 186 (354)
Q Consensus 157 ~~ll--p~~~dRvLYLD~D~IV~~D-l~eL~~~ 186 (354)
.... ....|-++++|+|.++.-| |..|...
T Consensus 73 ~~a~~~~~~~d~v~~~DaD~~~~p~~l~~l~~~ 105 (183)
T cd06438 73 RHLLNLADDPDAVVVFDADNLVDPNALEELNAR 105 (183)
T ss_pred HHHHhcCCCCCEEEEEcCCCCCChhHHHHHHHH
Confidence 1111 2247899999999998744 4555543
No 76
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=37.17 E-value=2.6e+02 Score=23.70 Aligned_cols=90 Identities=20% Similarity=0.111 Sum_probs=46.0
Q ss_pred hhhHHHHHHHHHHhcCCCCcEEEEEEeCCC-cHHHHHHHHhhCCcceEEEEEecccccccccchhHHhhccCchhhHHHh
Q 018535 77 LRGTMAAVLSILQHSTCPQNIEFHFLYSNF-EPDVYSSINSTFPYLNLKVYKFDSNRVRGKISKSIRQALDQPLNYARIY 155 (354)
Q Consensus 77 l~~~~v~i~Si~~~~~~~~~~~fhil~~~~-s~~~~~~L~~~~~~~~i~~~~~~~~~~~~~is~~~~~~~~s~~~y~Rl~ 155 (354)
...+.-++.|++..+.. +..+.|+.++. +......+++......++++....+ .+ . ..+|-.
T Consensus 12 ~~~l~~~l~Sl~~q~~~--~~eiiivdd~ss~d~t~~~~~~~~~~~~i~~i~~~~n--~G-~------------~~a~N~ 74 (201)
T cd04195 12 PEFLREALESILKQTLP--PDEVVLVKDGPVTQSLNEVLEEFKRKLPLKVVPLEKN--RG-L------------GKALNE 74 (201)
T ss_pred HHHHHHHHHHHHhcCCC--CcEEEEEECCCCchhHHHHHHHHHhcCCeEEEEcCcc--cc-H------------HHHHHH
Confidence 34667889999887642 35666666665 3333333332111112444432211 01 1 122222
Q ss_pred hhhhcccccCeEEEEecceEEec-cHHHHHh
Q 018535 156 LADIMPANVKRVIYLDSDLVVVD-DIGKLWD 185 (354)
Q Consensus 156 i~~llp~~~dRvLYLD~D~IV~~-Dl~eL~~ 185 (354)
.-..- .-+-++++|+|.++.. -|..+.+
T Consensus 75 g~~~a--~gd~i~~lD~Dd~~~~~~l~~~~~ 103 (201)
T cd04195 75 GLKHC--TYDWVARMDTDDISLPDRFEKQLD 103 (201)
T ss_pred HHHhc--CCCEEEEeCCccccCcHHHHHHHH
Confidence 22222 4688999999988774 3444444
No 77
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=36.60 E-value=2.4e+02 Score=23.51 Aligned_cols=87 Identities=14% Similarity=0.103 Sum_probs=45.4
Q ss_pred hhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHHhhCCcceEEEEEecccccccccchhHHhhccCchhhHHHhh
Q 018535 77 LRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTFPYLNLKVYKFDSNRVRGKISKSIRQALDQPLNYARIYL 156 (354)
Q Consensus 77 l~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~~~~~~~~i~~~~~~~~~~~~~is~~~~~~~~s~~~y~Rl~i 156 (354)
...+..++.|+.+.+. .++.+.|+.++.+++..+.+++.... +..+ +.... .+ . ..++-..
T Consensus 10 ~~~l~~~l~sl~~q~~--~~~evivvDd~s~d~~~~~~~~~~~~--~~~~-~~~~~-~g-~------------~~a~n~~ 70 (202)
T cd06433 10 AETLEETIDSVLSQTY--PNIEYIVIDGGSTDGTVDIIKKYEDK--ITYW-ISEPD-KG-I------------YDAMNKG 70 (202)
T ss_pred HHHHHHHHHHHHhCCC--CCceEEEEeCCCCccHHHHHHHhHhh--cEEE-EecCC-cC-H------------HHHHHHH
Confidence 3667788999987764 23666666555544444444432111 1111 11110 01 0 1222222
Q ss_pred hhhcccccCeEEEEecceEEecc-HHHHH
Q 018535 157 ADIMPANVKRVIYLDSDLVVVDD-IGKLW 184 (354)
Q Consensus 157 ~~llp~~~dRvLYLD~D~IV~~D-l~eL~ 184 (354)
-+.. .-+-|++||+|.++..+ +..+.
T Consensus 71 ~~~a--~~~~v~~ld~D~~~~~~~~~~~~ 97 (202)
T cd06433 71 IALA--TGDIIGFLNSDDTLLPGALLAVV 97 (202)
T ss_pred HHHc--CCCEEEEeCCCcccCchHHHHHH
Confidence 2222 35899999999988754 77766
No 78
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=33.75 E-value=4.6e+02 Score=25.59 Aligned_cols=112 Identities=14% Similarity=0.131 Sum_probs=55.6
Q ss_pred CceEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcH---HHHHHHHhhCCcc-eEEEEEecccccccccch
Q 018535 64 QTIHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEP---DVYSSINSTFPYL-NLKVYKFDSNRVRGKISK 139 (354)
Q Consensus 64 ~~i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~---~~~~~L~~~~~~~-~i~~~~~~~~~~~~~is~ 139 (354)
..+-|++.+- |-...+..++.|+++.+- +.++.+.|+.|+.++ +..+.+.+.+|.. ++++..... ...+...+
T Consensus 40 p~VSVIIpa~-Ne~~~L~~~L~sL~~q~y-p~~~eIIVVDd~StD~T~~i~~~~~~~~~~~~~i~vi~~~~-~~~g~~Gk 116 (384)
T TIGR03469 40 PAVVAVVPAR-NEADVIGECVTSLLEQDY-PGKLHVILVDDHSTDGTADIARAAARAYGRGDRLTVVSGQP-LPPGWSGK 116 (384)
T ss_pred CCEEEEEecC-CcHhHHHHHHHHHHhCCC-CCceEEEEEeCCCCCcHHHHHHHHHHhcCCCCcEEEecCCC-CCCCCcch
Confidence 3577776554 234667789999987643 234777777776544 3333333344421 344443211 10110000
Q ss_pred hHHhhccCchhhHHHhhhhhcccccCeEEEEecceEEecc-HHHHHh
Q 018535 140 SIRQALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDD-IGKLWD 185 (354)
Q Consensus 140 ~~~~~~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~D-l~eL~~ 185 (354)
.. +.. .=++. ..+..+ +.|-++++|+|+++..| |.++.+
T Consensus 117 ~~--A~n---~g~~~-A~~~~~-~gd~llflDaD~~~~p~~l~~lv~ 156 (384)
T TIGR03469 117 LW--AVS---QGIAA-ARTLAP-PADYLLLTDADIAHGPDNLARLVA 156 (384)
T ss_pred HH--HHH---HHHHH-HhccCC-CCCEEEEECCCCCCChhHHHHHHH
Confidence 00 000 00010 111222 26899999999998644 566664
No 79
>PRK11875 psbT photosystem II reaction center protein T; Reviewed
Probab=33.16 E-value=51 Score=20.32 Aligned_cols=16 Identities=19% Similarity=0.056 Sum_probs=10.9
Q ss_pred cchHHHHHHHHHHHHH
Q 018535 3 TTSTFIFIGLLSLLLS 18 (354)
Q Consensus 3 ~~~~~~~~~~~~~~~~ 18 (354)
..-||++.+.+..+++
T Consensus 4 l~Ytfll~~tlgiiFF 19 (31)
T PRK11875 4 FAYILILTLALVTLFF 19 (31)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3457787777776666
No 80
>PRK10018 putative glycosyl transferase; Provisional
Probab=31.59 E-value=4.4e+02 Score=24.68 Aligned_cols=102 Identities=14% Similarity=0.065 Sum_probs=55.3
Q ss_pred CceEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcH-H-HHHHHHhhCCcceEEEEEecccccccccchhH
Q 018535 64 QTIHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEP-D-VYSSINSTFPYLNLKVYKFDSNRVRGKISKSI 141 (354)
Q Consensus 64 ~~i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~-~-~~~~L~~~~~~~~i~~~~~~~~~~~~~is~~~ 141 (354)
..+-|++.+- |-...+.-+|.|++..+- .++.+.|+.|+.+. + ..+.+++ +...++++...+.. .+
T Consensus 5 p~VSVIip~y-N~~~~l~~~l~Svl~Qt~--~~~EiIVVDDgS~~~~~~~~~~~~-~~~~ri~~i~~~~n-------~G- 72 (279)
T PRK10018 5 PLISIYMPTW-NRQQLAIRAIKSVLRQDY--SNWEMIIVDDCSTSWEQLQQYVTA-LNDPRITYIHNDIN-------SG- 72 (279)
T ss_pred CEEEEEEEeC-CCHHHHHHHHHHHHhCCC--CCeEEEEEECCCCCHHHHHHHHHH-cCCCCEEEEECCCC-------CC-
Confidence 3477777654 233345578999998754 34777777776542 2 2333322 22224444432111 01
Q ss_pred HhhccCchhhHHHhhhhhcccccCeEEEEecceEEecc-HHHHHhc
Q 018535 142 RQALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDD-IGKLWDV 186 (354)
Q Consensus 142 ~~~~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~D-l~eL~~~ 186 (354)
.+.+|-..-+.. .-+-|++||+|.++..+ |..+.+.
T Consensus 73 -------~~~a~N~gi~~a--~g~~I~~lDaDD~~~p~~l~~~~~~ 109 (279)
T PRK10018 73 -------ACAVRNQAIMLA--QGEYITGIDDDDEWTPNRLSVFLAH 109 (279)
T ss_pred -------HHHHHHHHHHHc--CCCEEEEECCCCCCCccHHHHHHHH
Confidence 112222222222 35899999999998866 6666653
No 81
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=30.49 E-value=3.5e+02 Score=23.26 Aligned_cols=89 Identities=13% Similarity=0.150 Sum_probs=46.7
Q ss_pred hhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHH---HHHHHHhhCCcceEEEEEecccccccccchhHHhhccCchhhHHH
Q 018535 78 RGTMAAVLSILQHSTCPQNIEFHFLYSNFEPD---VYSSINSTFPYLNLKVYKFDSNRVRGKISKSIRQALDQPLNYARI 154 (354)
Q Consensus 78 ~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~---~~~~L~~~~~~~~i~~~~~~~~~~~~~is~~~~~~~~s~~~y~Rl 154 (354)
..+..++.|+.+... .....+.|+.++.+++ ..+.+.+..+. ++++..... .+ . ..++-
T Consensus 10 ~~l~~~l~sl~~q~~-~~~~eiiiVDd~S~d~t~~~~~~~~~~~~~--i~~~~~~~n--~G-~------------~~a~n 71 (224)
T cd06442 10 ENIPELIERLDAALK-GIDYEIIVVDDNSPDGTAEIVRELAKEYPR--VRLIVRPGK--RG-L------------GSAYI 71 (224)
T ss_pred hhHHHHHHHHHHhhc-CCCeEEEEEeCCCCCChHHHHHHHHHhCCc--eEEEecCCC--CC-h------------HHHHH
Confidence 446678888887653 2347777777765432 33333333443 333332111 11 0 12222
Q ss_pred hhhhhcccccCeEEEEecceEEecc-HHHHHhc
Q 018535 155 YLADIMPANVKRVIYLDSDLVVVDD-IGKLWDV 186 (354)
Q Consensus 155 ~i~~llp~~~dRvLYLD~D~IV~~D-l~eL~~~ 186 (354)
..-+... -+-|++||+|.++..+ |..|.+.
T Consensus 72 ~g~~~a~--gd~i~~lD~D~~~~~~~l~~l~~~ 102 (224)
T cd06442 72 EGFKAAR--GDVIVVMDADLSHPPEYIPELLEA 102 (224)
T ss_pred HHHHHcC--CCEEEEEECCCCCCHHHHHHHHHH
Confidence 2222222 3789999999887744 6667664
No 82
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=28.79 E-value=1.2e+02 Score=26.45 Aligned_cols=104 Identities=15% Similarity=0.246 Sum_probs=47.2
Q ss_pred eEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHH---HHHHHHhhCCcceEEEEEecccccccccchhHH
Q 018535 66 IHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPD---VYSSINSTFPYLNLKVYKFDSNRVRGKISKSIR 142 (354)
Q Consensus 66 i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~---~~~~L~~~~~~~~i~~~~~~~~~~~~~is~~~~ 142 (354)
|.|++.+= +-...+.-++.|+++..- .++.++|+.++.+++ ..+.+.+.++...+++....... +. ....
T Consensus 3 v~Vvip~~-~~~~~l~~~l~sl~~~~~--~~~~v~vvd~~~~~~~~~~~~~~~~~~~~~~v~vi~~~~~~--g~--~~k~ 75 (228)
T PF13641_consen 3 VSVVIPAY-NEDDVLRRCLESLLAQDY--PRLEVVVVDDGSDDETAEILRALAARYPRVRVRVIRRPRNP--GP--GGKA 75 (228)
T ss_dssp EEEE--BS-S-HHHHHHHHHHHTTSHH--HTEEEEEEEE-SSS-GCTTHHHHHHTTGG-GEEEEE----H--HH--HHHH
T ss_pred EEEEEEec-CCHHHHHHHHHHHHcCCC--CCeEEEEEECCCChHHHHHHHHHHHHcCCCceEEeecCCCC--Cc--chHH
Confidence 55555442 222255668888886433 348888888665443 23344455666555554432110 00 0000
Q ss_pred hhccCchhhHHHhhhhhcccccCeEEEEecceEEecc-HHHHHhc
Q 018535 143 QALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDD-IGKLWDV 186 (354)
Q Consensus 143 ~~~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~D-l~eL~~~ 186 (354)
. +. ...+.. . ..+-+++||+|+++-.| |.++...
T Consensus 76 ~------a~-n~~~~~-~--~~d~i~~lD~D~~~~p~~l~~~~~~ 110 (228)
T PF13641_consen 76 R------AL-NEALAA-A--RGDYILFLDDDTVLDPDWLERLLAA 110 (228)
T ss_dssp H------HH-HHHHHH------SEEEEE-SSEEE-CHHHHHHHHH
T ss_pred H------HH-HHHHHh-c--CCCEEEEECCCcEECHHHHHHHHHH
Confidence 0 01 111121 2 36899999999999643 5555543
No 83
>cd06422 NTP_transferase_like_1 NTP_transferase_like_1 is a member of the nucleotidyl transferase family. This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase.
Probab=28.00 E-value=1.7e+02 Score=25.81 Aligned_cols=23 Identities=13% Similarity=0.281 Sum_probs=20.5
Q ss_pred CeEEEEecceEEeccHHHHHhcC
Q 018535 165 KRVIYLDSDLVVVDDIGKLWDVD 187 (354)
Q Consensus 165 dRvLYLD~D~IV~~Dl~eL~~~d 187 (354)
+.++.+.+|+++.-|+.++.+.-
T Consensus 98 ~~~lv~~~D~i~~~~~~~~~~~~ 120 (221)
T cd06422 98 EPFLVVNGDILWDGDLAPLLLLH 120 (221)
T ss_pred CCEEEEeCCeeeCCCHHHHHHHH
Confidence 67999999999999999998754
No 84
>KOG4748 consensus Subunit of Golgi mannosyltransferase complex [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=26.99 E-value=74 Score=31.31 Aligned_cols=161 Identities=14% Similarity=0.088 Sum_probs=77.2
Q ss_pred cccccCeEEEEecceEEeccHHHHHhcCCCCCe---EEeecccc--cCcc-cccccccccchhhh--cccCCCCCcceee
Q 018535 160 MPANVKRVIYLDSDLVVVDDIGKLWDVDLEGRV---LAAPEYCH--ANFT-NFFTDLFWSDRNLA--KTFDGRDPCYFNT 231 (354)
Q Consensus 160 lp~~~dRvLYLD~D~IV~~Dl~eL~~~dl~g~~---iAAv~d~~--~~~~-~~~~~~~~~~~~~~--~~~~~~~~~yFNS 231 (354)
.| +.+-+=+||.|.++..---+|=+.-++.+- .+-..|.. .++. ...+...|+..... ..+...+...+||
T Consensus 173 yP-~AeWIWWlD~DAlimn~~lsL~~~ilk~~~L~~~l~~nd~~~~~~~n~~~~~~~~~~~d~~~~~~~ii~qD~nG~na 251 (364)
T KOG4748|consen 173 YP-DAEWIWWLDQDALIMNPDLSLQDHILKPENLVTHLLRNDQKSINPLNIFRLRPRTPSLDDLEDIAFIIPQDCNGINA 251 (364)
T ss_pred CC-CCcEEEEecccchhhCcccchhHHhcCHHHHHHhhccccccccccCCccccccccccccchhhhceecccCCCCccc
Confidence 56 689999999999998765555443332210 11111100 0000 00001122221111 1223556778999
Q ss_pred eeEEEecHHHHhcChHHHHHHHHHHhc-cccccCCCCccHHHHH------hccceeecCccc-ccccCCCCccccccccC
Q 018535 232 GVMVMNVEKWRQGGYSQRVEEWMVVQK-QKRIYHLGSLPPFLLV------LAGNIKGVDHRW-NQHGLGGDNIEGKCRNL 303 (354)
Q Consensus 232 GVmLinl~k~R~~~i~~~~~~~~~~~~-~~~~~~~~DQd~LN~v------f~~~i~~Lp~~w-N~~~~~~~~~~~~~~~~ 303 (354)
|=+|+--.+ ++.-++++...-- ....+...+|+++-.+ +.+.|..||.++ |....+ ....+ .
T Consensus 252 GSfLirns~-----~~~~llD~w~dp~l~~~~~~~~Eq~al~~~~e~h~~l~~~vgilp~r~ins~~~~-~~~~g----~ 321 (364)
T KOG4748|consen 252 GSFLIRNSE-----WGRLLLDAWNDPLLYELLWGQKEQDALGHFLENHPQLHSHVGILPLRYINSYPNG-APGYG----Y 321 (364)
T ss_pred cceEEecCc-----cchhHHHhccCHHHHhhccchHHHHHHHHHHhhchhhhhheeeccHHHHhcCCCC-CCCCc----c
Confidence 999994333 3333444322100 0112233456655544 456788888876 332222 11111 1
Q ss_pred CCCCCEEEEcCCCCCCCCCCCCCCCccccccccccccc
Q 018535 304 HPGPISLLHWSGKGKPWLRLDSRKPCTVDHLWAPYDLY 341 (354)
Q Consensus 304 ~~~~~~IIHf~g~~KPW~~~~~~~~~~~~~lW~~y~~~ 341 (354)
+.++ -++||.| . |....|. +.|.+|...
T Consensus 322 ~egd-lvvhFaG-C--~~~~~C~------~~~~~y~~~ 349 (364)
T KOG4748|consen 322 EEGD-LVVHFAG-C--YVRNRCL------EEMEKYFNL 349 (364)
T ss_pred ccCC-eEEEecc-c--ccHhHHH------HHHHHHHHH
Confidence 2233 7999999 4 6554432 556555543
No 85
>PF11735 CAP59_mtransfer: Cryptococcal mannosyltransferase 1 ; InterPro: IPR021047 The capsule of pathogenic fungi is a complex polysaccharide whose formation is determined by a number of enzymes including, most importantly, alpha-1,3-mannosyltransferase 1 [, ]. It is responsible for addition of mannose residues in an alpha-1,3 linkage to a polymannosly precursor.
Probab=24.31 E-value=4.2e+02 Score=24.52 Aligned_cols=32 Identities=25% Similarity=0.370 Sum_probs=23.1
Q ss_pred ccCeEEEEecceEEe-ccHHHHHhcCCCCCeEEe
Q 018535 163 NVKRVIYLDSDLVVV-DDIGKLWDVDLEGRVLAA 195 (354)
Q Consensus 163 ~~dRvLYLD~D~IV~-~Dl~eL~~~dl~g~~iAA 195 (354)
.++|||||+ |+++. .|+-+|....-.+.+-+|
T Consensus 112 ~fd~VlfLN-DV~f~~~Dil~LL~~~~~~~~~~a 144 (241)
T PF11735_consen 112 RFDKVLFLN-DVFFCPEDILELLFTRNRGNYDMA 144 (241)
T ss_pred CcCEEEEec-CcccCHHHHHHHHhhcCcccccch
Confidence 479999999 86555 999999877653333333
No 86
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=23.02 E-value=6.4e+02 Score=23.79 Aligned_cols=41 Identities=22% Similarity=0.335 Sum_probs=26.7
Q ss_pred CceEEEEEeCc--chhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCc
Q 018535 64 QTIHITMTLDA--NYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFE 107 (354)
Q Consensus 64 ~~i~I~~~~D~--~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s 107 (354)
+.|=|+....+ .|+....-.|.|+ .-+ .+.+.+-+++.+.+
T Consensus 25 e~VLILtplrna~~~l~~y~~~L~~L--~YP-~~lIsLgfLv~d~~ 67 (269)
T PF03452_consen 25 ESVLILTPLRNAASFLPDYFDNLLSL--TYP-HELISLGFLVSDSS 67 (269)
T ss_pred CeEEEEEecCCchHHHHHHHHHHHhC--CCC-chheEEEEEcCCCc
Confidence 55666655532 3777777777777 223 25688888888776
No 87
>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=22.38 E-value=2.7e+02 Score=27.91 Aligned_cols=94 Identities=18% Similarity=0.280 Sum_probs=49.5
Q ss_pred eEEEEEe-CcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcH--HHHHHHHh---hCCcceEEEEEecccccccccch
Q 018535 66 IHITMTL-DANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEP--DVYSSINS---TFPYLNLKVYKFDSNRVRGKISK 139 (354)
Q Consensus 66 i~I~~~~-D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~--~~~~~L~~---~~~~~~i~~~~~~~~~~~~~is~ 139 (354)
..|++++ ++++. .++-+++|+++.++. .-+.=.|+.|+.|. .+++.|-+ .|.. .+++.. .+.-++.|..
T Consensus 157 ~SVviVFHNEGws-~LmRTVHSVi~RsP~-~~l~eivlvDDfSdKehLkekLDeYv~~fnG-lVkV~R--ne~REGLI~a 231 (603)
T KOG3737|consen 157 SSVVIVFHNEGWS-TLMRTVHSVIKRSPR-KYLAEIVLVDDFSDKEHLKEKLDEYVKLFNG-LVKVFR--NERREGLIQA 231 (603)
T ss_pred ceEEEEEecCccH-HHHHHHHHHHhcCcH-HhhheEEEeccCCccHHHHHHHHHHHHHhcC-EEEEEe--cchhhhhhhh
Confidence 3444444 44444 466789999999873 44555567777654 35655543 2433 233332 3322333332
Q ss_pred hHHhhccCchhhHHHhhhhhcccccCeEEEEecceEEecc
Q 018535 140 SIRQALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDD 179 (354)
Q Consensus 140 ~~~~~~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~D 179 (354)
-.+.+ -.-. =+=+||||+-.=|+.+
T Consensus 232 RSiGA------------~~at---GeV~ifLDAHCEVntN 256 (603)
T KOG3737|consen 232 RSIGA------------QKAT---GEVLIFLDAHCEVNTN 256 (603)
T ss_pred hccch------------hhcc---ccEEEEEecceeeecc
Confidence 11110 1112 2568899988877765
No 88
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=21.91 E-value=5.4e+02 Score=22.47 Aligned_cols=38 Identities=8% Similarity=-0.000 Sum_probs=22.7
Q ss_pred eEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeC
Q 018535 66 IHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYS 104 (354)
Q Consensus 66 i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~ 104 (354)
+-|++.+= |....+..+|.|+++-+-....+.+.|+.+
T Consensus 3 vSViIp~y-Ne~~~l~~~L~sl~~q~~~~~~~eIiVvD~ 40 (232)
T cd06437 3 VTVQLPVF-NEKYVVERLIEAACALDYPKDRLEIQVLDD 40 (232)
T ss_pred eEEEEecC-CcHHHHHHHHHHHHhcCCCccceEEEEEEC
Confidence 55666443 445567789999987543333456655543
No 89
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=21.85 E-value=7.2e+02 Score=26.78 Aligned_cols=35 Identities=17% Similarity=0.143 Sum_probs=22.8
Q ss_pred ccCeEEEEecceEEeccH-HHHHhcCCCCCeEEeec
Q 018535 163 NVKRVIYLDSDLVVVDDI-GKLWDVDLEGRVLAAPE 197 (354)
Q Consensus 163 ~~dRvLYLD~D~IV~~Dl-~eL~~~dl~g~~iAAv~ 197 (354)
+-|-++.+|+|.++..|. .++-..-..+.-+|++.
T Consensus 228 ~gd~Il~lDAD~v~~pd~L~~~v~~f~~dp~v~~Vq 263 (713)
T TIGR03030 228 DGELILIFDADHVPTRDFLQRTVGWFVEDPKLFLVQ 263 (713)
T ss_pred CCCEEEEECCCCCcChhHHHHHHHHHHhCCCEEEEe
Confidence 358999999999998774 55544322344455553
No 90
>PF11397 GlcNAc: Glycosyltransferase (GlcNAc); InterPro: IPR021067 GlcNAc is an enzyme that carries out the first glycosylation step of hydroxylated Skp1; it is found in the cytoplasm and results in a pentasaccharide-linked 'HyPro-143[, ].
Probab=21.64 E-value=5.3e+02 Score=25.15 Aligned_cols=34 Identities=15% Similarity=0.203 Sum_probs=29.4
Q ss_pred hhhHHHhhhhhcccccCeEEEEecceEEeccHHHH
Q 018535 149 LNYARIYLADIMPANVKRVIYLDSDLVVVDDIGKL 183 (354)
Q Consensus 149 ~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~Dl~eL 183 (354)
.+|+|.+.-.+.- +-+-+|-||+-+.+..+=+++
T Consensus 103 p~~AR~la~~l~~-gE~y~LqiDSH~rF~~~WD~~ 136 (343)
T PF11397_consen 103 PCWARYLAQKLYR-GEDYYLQIDSHMRFVPGWDEI 136 (343)
T ss_pred hHHHHHHHHHHhC-CCeEEEEEeccceeeccHHHH
Confidence 3799999999986 689999999999999886653
No 91
>PRK10073 putative glycosyl transferase; Provisional
Probab=21.02 E-value=5.6e+02 Score=24.46 Aligned_cols=100 Identities=16% Similarity=0.186 Sum_probs=56.1
Q ss_pred CceEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHH---HHHHHHhhCCcceEEEEEecccccccccchh
Q 018535 64 QTIHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPD---VYSSINSTFPYLNLKVYKFDSNRVRGKISKS 140 (354)
Q Consensus 64 ~~i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~---~~~~L~~~~~~~~i~~~~~~~~~~~~~is~~ 140 (354)
..+.|++.+= |-...+.-++.||+..+- .++.+.|+.|+.+++ ..+...+..+. +++.. .+ ....
T Consensus 6 p~vSVIIP~y-N~~~~L~~~l~Sl~~Qt~--~~~EIIiVdDgStD~t~~i~~~~~~~~~~--i~vi~--~~--n~G~--- 73 (328)
T PRK10073 6 PKLSIIIPLY-NAGKDFRAFMESLIAQTW--TALEIIIVNDGSTDNSVEIAKHYAENYPH--VRLLH--QA--NAGV--- 73 (328)
T ss_pred CeEEEEEecc-CCHHHHHHHHHHHHhCCC--CCeEEEEEeCCCCccHHHHHHHHHhhCCC--EEEEE--CC--CCCh---
Confidence 3477777653 334567788999998765 358888888776543 22333333443 44332 11 1111
Q ss_pred HHhhccCchhhHHHhhhhhcccccCeEEEEecceEEecc-HHHHHhc
Q 018535 141 IRQALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDD-IGKLWDV 186 (354)
Q Consensus 141 ~~~~~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~D-l~eL~~~ 186 (354)
+.+|-..-+.. .-+-|+++|+|-.+..+ +..|.+.
T Consensus 74 ---------~~arN~gl~~a--~g~yi~flD~DD~~~p~~l~~l~~~ 109 (328)
T PRK10073 74 ---------SVARNTGLAVA--TGKYVAFPDADDVVYPTMYETLMTM 109 (328)
T ss_pred ---------HHHHHHHHHhC--CCCEEEEECCCCccChhHHHHHHHH
Confidence 12222222222 34889999999888755 5556654
No 92
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=20.17 E-value=4.6e+02 Score=20.97 Aligned_cols=41 Identities=12% Similarity=0.033 Sum_probs=26.8
Q ss_pred ceEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcH
Q 018535 65 TIHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEP 108 (354)
Q Consensus 65 ~i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~ 108 (354)
.+-|++.+= |....+..++.|+++.+..+ ..+.|+.++.++
T Consensus 4 ~~siiip~~-n~~~~l~~~l~s~~~q~~~~--~eiivvddgs~d 44 (291)
T COG0463 4 KVSVVIPTY-NEEEYLPEALESLLNQTYKD--FEIIVVDDGSTD 44 (291)
T ss_pred cEEEEEecc-chhhhHHHHHHHHHhhhhcc--eEEEEEeCCCCC
Confidence 455665443 45588889999999987632 565555555544
Done!