Query 018535
Match_columns 354
No_of_seqs 213 out of 1359
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 16:47:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018535.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018535hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tzt_A Glycosyl transferase fa 100.0 6E-49 2.1E-53 369.2 17.2 259 64-341 4-270 (276)
2 1g9r_A Glycosyl transferase; a 100.0 8.9E-45 3E-49 346.4 17.8 253 66-339 1-268 (311)
3 1ll2_A Glycogenin-1; protein-s 100.0 3E-32 1E-36 261.9 11.8 214 64-323 3-223 (333)
4 3u2u_A Glycogenin-1, GN-1, GN1 100.0 6.3E-31 2.1E-35 244.4 10.2 208 67-323 7-224 (263)
5 1o7q_A N-acetyllactosaminide a 90.5 10 0.00035 34.6 18.0 204 64-290 48-262 (289)
6 3ioh_A Histo-blood group ABO s 85.3 22 0.00077 32.5 18.0 203 64-289 58-270 (298)
7 1qg8_A Protein (spore coat pol 79.3 23 0.00078 30.4 11.8 108 65-185 2-111 (255)
8 4ayl_A BOGT-metal-independent 74.3 48 0.0016 29.5 13.7 202 65-290 2-216 (246)
9 1xhb_A Polypeptide N-acetylgal 68.3 18 0.00062 34.8 9.0 105 64-186 29-138 (472)
10 2d7i_A Polypeptide N-acetylgal 63.4 32 0.0011 34.3 9.9 103 64-185 112-219 (570)
11 2ffu_A Ppgalnact-2, polypeptid 62.0 34 0.0012 33.2 9.6 103 64-186 66-170 (501)
12 4hg6_A Cellulose synthase subu 59.8 44 0.0015 34.9 10.5 45 64-108 140-184 (802)
13 1fo8_A Alpha-1,3-mannosyl-glyc 56.4 82 0.0028 29.3 10.8 109 66-185 4-121 (343)
14 3bcv_A Putative glycosyltransf 55.5 83 0.0028 26.3 10.1 99 64-185 5-107 (240)
15 2z86_A Chondroitin synthase; G 52.4 88 0.003 31.0 11.0 104 64-185 93-197 (625)
16 3arc_T Photosystem II reaction 31.6 34 0.0012 20.4 2.3 15 4-18 5-19 (32)
17 2z86_A Chondroitin synthase; G 27.1 2.6E+02 0.0089 27.5 9.7 99 64-185 375-477 (625)
No 1
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=100.00 E-value=6e-49 Score=369.24 Aligned_cols=259 Identities=18% Similarity=0.270 Sum_probs=183.4
Q ss_pred CceEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHHhhC--CcceEEEEEecccccccccchhH
Q 018535 64 QTIHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTF--PYLNLKVYKFDSNRVRGKISKSI 141 (354)
Q Consensus 64 ~~i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~~~~--~~~~i~~~~~~~~~~~~~is~~~ 141 (354)
..|||++|+|++|+++++|+++||++|+++ ++++|||++++++++.++.|++.. .+.+++++.++.+.+.....
T Consensus 4 m~i~I~~~~d~~Y~~~~~v~i~Sl~~~~~~-~~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~~~~~~~~~~~~--- 79 (276)
T 3tzt_A 4 MADALLLTLDENYIPQMKVLMTSIYINNPG-RIFDVYLIHSRISEDKLKDLGEDLKKFSYTLYPIRATDDLFSFAKV--- 79 (276)
T ss_dssp -CEEEEEECCGGGHHHHHHHHHHHHHHSTT-CCEEEEEEESCCCHHHHHHHHHHHHTTTCEEEEEECC------------
T ss_pred eeEEEEEEeCHhHHHHHHHHHHHHHHhCCC-CceEEEEEeCCCCHHHHHHHHHHHHHcCCEEEEEEeCHHHHhcCcc---
Confidence 569999999999999999999999999985 679999999999987655555432 24578888887655443221
Q ss_pred HhhccCchhhHHHhhhhhcccccCeEEEEecceEEeccHHHHHhcCCCCCeEEeecccccCcccccccccccchhhhccc
Q 018535 142 RQALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDDIGKLWDVDLEGRVLAAPEYCHANFTNFFTDLFWSDRNLAKTF 221 (354)
Q Consensus 142 ~~~~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~Dl~eL~~~dl~g~~iAAv~d~~~~~~~~~~~~~~~~~~~~~~~ 221 (354)
..+.++.+|+||++|+++|++++||||||+|+||++||++||++|++|+.+||++||.... |........+
T Consensus 80 -~~~~s~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~di~~L~~~dl~~~~~aav~d~~~~~--------~~~~~~~~~l 150 (276)
T 3tzt_A 80 -TDRYPKEMYYRLLAGEFLPENLGEILYLDPDMLVINPLDDLLRTDISDYILAAASHTGKTD--------MANNVNRIRL 150 (276)
T ss_dssp -----CHHHHHHHTHHHHSCTTCCEEEEECSSEEECSCSHHHHTCCCTTSSEEEEEC-----------------------
T ss_pred -ccccCHHHHHHHHHHHHcccccCeEEEEeCCeeecCCHHHHhhcCCCCCeEEEEEecccch--------HHHHHHHhcC
Confidence 2345788999999999999889999999999999999999999999999999999886420 1000001112
Q ss_pred CCCCCcceeeeeEEEecHHHHhcChHHHHHHHHHHhccccccCCCCccHHHHHhccceeecCc-ccccccCCCCc--ccc
Q 018535 222 DGRDPCYFNTGVMVMNVEKWRQGGYSQRVEEWMVVQKQKRIYHLGSLPPFLLVLAGNIKGVDH-RWNQHGLGGDN--IEG 298 (354)
Q Consensus 222 ~~~~~~yFNSGVmLinl~k~R~~~i~~~~~~~~~~~~~~~~~~~~DQd~LN~vf~~~i~~Lp~-~wN~~~~~~~~--~~~ 298 (354)
+...+||||||||||+++||+.++++++++|++.+. ....++|||+||.+|.++++.||+ +||++...... ...
T Consensus 151 -~~~~~yfNsGV~linl~~~R~~~~~~~~~~~~~~~~--~~~~~~DQd~LN~~f~~~~~~Lp~~~wN~~~~~~~~~~~~~ 227 (276)
T 3tzt_A 151 -GTDTDYYNSGLLLINLKRAREEIDPDEIFSFVEDNH--MNLLLPDQDILNAMYGDRIYPLDDLIYNYDARNYSSYLIRS 227 (276)
T ss_dssp ------CEEEEEEEEEHHHHHHHCCHHHHHHHHHHC----------CHHHHHHHGGGEEEEEHHHHSEETTCHHHHHHHT
T ss_pred -CCCCCeEEeeEEEEEHHHHHhhhHHHHHHHHHHhcc--ccccCCChhHHHHHHhCCEEECCchheeeecccchhhhccc
Confidence 223589999999999999999999999999997543 224579999999999999999999 99998521100 000
Q ss_pred cc-ccC--CCCCCEEEEcCCCCCCCCCCCCCCCccccccccccccc
Q 018535 299 KC-RNL--HPGPISLLHWSGKGKPWLRLDSRKPCTVDHLWAPYDLY 341 (354)
Q Consensus 299 ~~-~~~--~~~~~~IIHf~g~~KPW~~~~~~~~~~~~~lW~~y~~~ 341 (354)
.. ... ..++++||||+|+.|||+..... +++++||+|...
T Consensus 228 ~~~~~~~~~~~~~~iiHy~g~~KPW~~~~~~---~~~~~w~~Y~~~ 270 (276)
T 3tzt_A 228 KKQADLAWLMDHTVVLHFCGRDKPWKKNHRN---KFTSLYKHYMSL 270 (276)
T ss_dssp TTCCSHHHHHHHCCEEECCSSCCTTSTTCCS---TTHHHHHHHHHH
T ss_pred cchhhhhhhccCCeEEEECCCCCCcCCCCCC---chHHHHHHHHHH
Confidence 00 000 01346899999999999987543 599999999764
No 2
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=100.00 E-value=8.9e-45 Score=346.38 Aligned_cols=253 Identities=21% Similarity=0.349 Sum_probs=189.9
Q ss_pred eEEEEEeCcchhhhHHHHHHHH-HHhcCCCCcEEEEEEeCCCcHHHHHHHHhhCC--cceEEEEEecccccccccchhHH
Q 018535 66 IHITMTLDANYLRGTMAAVLSI-LQHSTCPQNIEFHFLYSNFEPDVYSSINSTFP--YLNLKVYKFDSNRVRGKISKSIR 142 (354)
Q Consensus 66 i~I~~~~D~~yl~~~~v~i~Si-~~~~~~~~~~~fhil~~~~s~~~~~~L~~~~~--~~~i~~~~~~~~~~~~~is~~~~ 142 (354)
|||++|+|++|++++.|+++|| ++|++ .++.|||++++++++.++.|++... +.+++++.++.+.+......
T Consensus 1 m~I~~~~d~~Y~~~~~vli~Sl~l~~~~--~~~~f~il~~~ls~~~~~~L~~~~~~~~~~i~~~~~~~~~~~~~~~~--- 75 (311)
T 1g9r_A 1 MDIVFAADDNYAAYLCVAAKSVEAAHPD--TEIRFHVLDAGISEANRAAVAANLRGGGGNIRFIDVNPEDFAGFPLN--- 75 (311)
T ss_dssp CEEEEEECGGGHHHHHHHHHHHHHTCTT--SCCEEEEEESSCCHHHHHHHHHHSGGGTTTEEEEECCGGGGTTSCCC---
T ss_pred CeEEEECCHhHHHHHHHHHHHHHHHcCC--CCceEEEEECCCCHHHHHHHHHHHHHcCCEEEEEEcCHHHHhcCccc---
Confidence 7999999999999999999999 88875 5699999999998876666665432 34677787776544332211
Q ss_pred hhccCchhhHHHhhhhhcccccCeEEEEecceEEeccHHHHHhcCCCCCeEEeecccccCcccccccccccchhhhcccC
Q 018535 143 QALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDDIGKLWDVDLEGRVLAAPEYCHANFTNFFTDLFWSDRNLAKTFD 222 (354)
Q Consensus 143 ~~~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~Dl~eL~~~dl~g~~iAAv~d~~~~~~~~~~~~~~~~~~~~~~~~ 222 (354)
..+.++.+|+||++|+++| +++||||||+|+||++||++||++|++|+.+||+.||.... .+.....++
T Consensus 76 ~~~~s~~~y~Rl~l~~ll~-~~~kvlyLD~D~iv~~di~eL~~~~l~~~~~aav~d~~~~~----------~~~~~~~~~ 144 (311)
T 1g9r_A 76 IRHISITTYARLKLGEYIA-DCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASIDLFVER----------QEGYKQKIG 144 (311)
T ss_dssp CTTCCGGGGGGGGHHHHCC-SCSCEEEECSSEEECSCCHHHHTCCCTTCSEEEEECHHHHT----------STTHHHHTT
T ss_pred cccCCHHHHHHHHHHHHhh-hcCEEEEEcCCeEeccCHHHHhccCCCCcEEEEEeccchhh----------hHHHHHhcC
Confidence 2355678999999999998 79999999999999999999999999999999998874310 011111222
Q ss_pred -CCCCcceeeeeEEEecHHHHhcChHHHHHHHHHHhccccccCCCCccHHHHHhccceeecCcccccccCCC--------
Q 018535 223 -GRDPCYFNTGVMVMNVEKWRQGGYSQRVEEWMVVQKQKRIYHLGSLPPFLLVLAGNIKGVDHRWNQHGLGG-------- 293 (354)
Q Consensus 223 -~~~~~yFNSGVmLinl~k~R~~~i~~~~~~~~~~~~~~~~~~~~DQd~LN~vf~~~i~~Lp~~wN~~~~~~-------- 293 (354)
..+.+||||||||+|+++||+.++++++++|++.... ...++|||+||.+|.+++..||++||++....
T Consensus 145 ~~~~~~yfNsGv~linl~~~r~~~~~~~~~~~~~~~~~--~~~~~DQd~lN~~f~~~~~~Lp~~wN~~~~~~~~~~~~~~ 222 (311)
T 1g9r_A 145 MADGEYYFNAGVLLINLKKWRRHDIFKMSSEWVEQYKD--VMQYQDQDILNGLFKGGVCYANSRFNFMPTNYAFMANWFA 222 (311)
T ss_dssp CCTTSCCEEEEEEEECHHHHTTSCHHHHHHHHHHHHTT--TCSSHHHHHHHHHHTTSEEEECGGGSBCHHHHHTCC----
T ss_pred CCCCCceEeeeeeeeeHHHHHhcchHHHHHHHHHhccC--cCccCCcCHHHHHHcCCEEEcChhhccCcchhhHHhhhcc
Confidence 1246799999999999999999999999999986432 24578999999999999999999999974211
Q ss_pred -Ccccccc--ccCCCCCCEEEEcCCCCCCCCCCCCCCCccccccccccc
Q 018535 294 -DNIEGKC--RNLHPGPISLLHWSGKGKPWLRLDSRKPCTVDHLWAPYD 339 (354)
Q Consensus 294 -~~~~~~~--~~~~~~~~~IIHf~g~~KPW~~~~~~~~~~~~~lW~~y~ 339 (354)
.+....+ .....++++||||+|+.|||+.... + +..++|..+.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~iiHy~g~~KPW~~~~~-~--~~~~~~~~~~ 268 (311)
T 1g9r_A 223 SRHTDPLYRDRTNTVMPVAVSHYCGPAKPWHRDCT-A--WGAERFTELA 268 (311)
T ss_dssp CSCCCHHHHHHHSCCSSCSEEECCSSCCTTSSSCC-S--TTTHHHHHHH
T ss_pred cccchhhhhHHhhccCCCEEEEeCCcCCCCCCCCC-C--ccHHHHHHHH
Confidence 1000000 1122357799999999999997643 2 2445554444
No 3
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*
Probab=99.97 E-value=3e-32 Score=261.93 Aligned_cols=214 Identities=16% Similarity=0.271 Sum_probs=148.2
Q ss_pred CceEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHHhhCCcceEEEEEecccccccccchhHH-
Q 018535 64 QTIHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTFPYLNLKVYKFDSNRVRGKISKSIR- 142 (354)
Q Consensus 64 ~~i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~~~~~~~~i~~~~~~~~~~~~~is~~~~- 142 (354)
+.+.|++++|++|+.++.|+++||++|++. .++.+ +++++++++.++.|++.+. ++..++. +.........
T Consensus 3 ~~a~vt~~~d~~Yl~~a~vl~~SL~~~~s~-~~l~v-lv~~~is~~~~~~L~~~~~----~v~~v~~--l~~~~~~~~~~ 74 (333)
T 1ll2_A 3 DQAFVTLTTNDAYAKGALVLGSSLKQHRTS-RRLAV-LTTPQVSDTMRKALEIVFD----EVITVDI--LDSGDSAHLTL 74 (333)
T ss_dssp SEEEEEEESSHHHHHHHHHHHHHHHHTTCC-SEEEE-EECTTSCHHHHHHHHHHCS----EEEECCT--TSTTSTTHHHH
T ss_pred ceEEEEEEeCHHHHHHHHHHHHHHHHhCCC-CCEEE-EEcCCCCHHHHHHHHHhCC----EEEEEee--cCCcchhhccc
Confidence 568899999999999999999999999864 44444 4556788877778877653 2333332 1111111110
Q ss_pred -hhccCchhhHHHhhhhhcccccCeEEEEecceEEeccHHHHHhcCCCCCeEEeecccccCcccccccccccchhhhccc
Q 018535 143 -QALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDDIGKLWDVDLEGRVLAAPEYCHANFTNFFTDLFWSDRNLAKTF 221 (354)
Q Consensus 143 -~~~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~Dl~eL~~~dl~g~~iAAv~d~~~~~~~~~~~~~~~~~~~~~~~ 221 (354)
.......+|+||+++++ + +++||||||+|+||++||++||+++ .+||+.|.+ |
T Consensus 75 ~~~~~~~~t~~Kl~i~~l-~-~ydrvlYLDaD~lv~~di~eLf~~~----~~aAv~d~~-----------~--------- 128 (333)
T 1ll2_A 75 MKRPELGVTLTKLHCWSL-T-QYSKCVFMDADTLVLANIDDLFERE----ELSAAPDPG-----------W--------- 128 (333)
T ss_dssp HHCGGGHHHHHHGGGGGC-T-TCSEEEEECTTEEECSCCGGGGGSC----SSEEEECSS-----------S---------
T ss_pred ccccchHHHHHHHHHhHh-c-CCCeEEEEeCCEEeccCHHHHhCCC----ceeEEecCC-----------C---------
Confidence 01112368999999996 5 6999999999999999999999997 355554321 1
Q ss_pred CCCCCcceeeeeEEEecHHHHhcChHHHHHHHHHHhccccccCCCCccHHHHHhccce-----eecCcccccccCCCCcc
Q 018535 222 DGRDPCYFNTGVMVMNVEKWRQGGYSQRVEEWMVVQKQKRIYHLGSLPPFLLVLAGNI-----KGVDHRWNQHGLGGDNI 296 (354)
Q Consensus 222 ~~~~~~yFNSGVmLinl~k~R~~~i~~~~~~~~~~~~~~~~~~~~DQd~LN~vf~~~i-----~~Lp~~wN~~~~~~~~~ 296 (354)
++||||||||+|++. ...+++++++... ..+.++||++||.+|.+.+ ..||.+||++.......
T Consensus 129 ----~~~fNsGvmlin~~~----~~~~~l~~~~~~~---~~~~~~DQ~~LN~~f~~~~~~~~~~~Lp~~yN~~~~~~~~~ 197 (333)
T 1ll2_A 129 ----PDCFNSGVFVYQPSV----ETYNQLLHVASEQ---GSFDGGDQGLLNTFFNSWATTDIRKHLPFIYNLSSISIYSY 197 (333)
T ss_dssp ----TTSEEEEEEEECCCH----HHHHHHHHHHHHT---CCTTSSHHHHHHHHTTTTTTSCGGGBCCGGGSEETTHHHHT
T ss_pred ----CcceeeeEEEEeCCH----HHHHHHHHHHHhc---CCCCCCCHHHHHHHHHhhcccCccccCCcHHhcccccchhc
Confidence 369999999998864 2346666666532 2456799999999998654 79999999975321000
Q ss_pred ccccccCCCCCCEEEEcCCCCCCCCCC
Q 018535 297 EGKCRNLHPGPISLLHWSGKGKPWLRL 323 (354)
Q Consensus 297 ~~~~~~~~~~~~~IIHf~g~~KPW~~~ 323 (354)
...+.. ...+++||||+|..|||+..
T Consensus 198 ~p~~~~-~~~~~~IiHf~g~~KPW~~~ 223 (333)
T 1ll2_A 198 LPAFKA-FGANAKVVHFLGQTKPWNYT 223 (333)
T ss_dssp HHHHHH-HGGGCSEEECCSSCCGGGSC
T ss_pred cHHHHh-hcCCCEEEEECCCCCCCCCC
Confidence 000111 12457999999999999876
No 4
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A
Probab=99.97 E-value=6.3e-31 Score=244.39 Aligned_cols=208 Identities=17% Similarity=0.285 Sum_probs=144.6
Q ss_pred EEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEE-EeCCCcHHHHHHHHhhCCcceEEEEEecccccccccchhHHhhc
Q 018535 67 HITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHF-LYSNFEPDVYSSINSTFPYLNLKVYKFDSNRVRGKISKSIRQAL 145 (354)
Q Consensus 67 ~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhi-l~~~~s~~~~~~L~~~~~~~~i~~~~~~~~~~~~~is~~~~~~~ 145 (354)
=|.+++|++|+.++.++++||+++++. ..+++ ++++.+++.++.|++.+.. +..++. +........ ..+
T Consensus 7 yvTl~td~~Yl~ga~vL~~SL~~~~s~---~~lvvLvt~~vs~~~~~~L~~~~~~----vi~V~~--l~~~~~~~~-~~~ 76 (263)
T 3u2u_A 7 FVTLTTNDAYAKGALVLGSSLKQHRTT---RRLVVLATPQVSDSMRKVLETVFDE----VIMVDV--LDSGDSAHL-TLM 76 (263)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHTTCC---SEEEEEECTTSCHHHHHHHHHHSSE----EEECCC--CCCCCHHHH-HHT
T ss_pred EEEEEECHHHHHHHHHHHHHHHHhCCC---CCEEEEecCCCCHHHHHHHHHcCCe----EEEeee--cCCcchhhh-hhh
Confidence 355789999999999999999999863 34444 5567888878888776532 233321 111000000 000
Q ss_pred c---CchhhHHHhhhhhcccccCeEEEEecceEEeccHHHHHhcCCCCCeEEeecccccCcccccccccccchhhhcccC
Q 018535 146 D---QPLNYARIYLADIMPANVKRVIYLDSDLVVVDDIGKLWDVDLEGRVLAAPEYCHANFTNFFTDLFWSDRNLAKTFD 222 (354)
Q Consensus 146 ~---s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~Dl~eL~~~dl~g~~iAAv~d~~~~~~~~~~~~~~~~~~~~~~~~ 222 (354)
. ...+|.|+.++++. +++||||||+|++|++||++||+++ . +||+.|.+ |
T Consensus 77 ~rp~~~~~~~kl~~~~l~--~~~~vlylD~D~~v~~~~~~Lf~~~---~-~aA~~d~~-----------~---------- 129 (263)
T 3u2u_A 77 KRPELGVTLTKLHCWSLT--QYSKCVFMDADTLVLANIDDLFDRE---E-LSAAPDPG-----------W---------- 129 (263)
T ss_dssp TCTTGGGGGGGGGGGGCT--TCSEEEEECTTEEECSCCGGGGGSC---S-SEEEECTT-----------S----------
T ss_pred cCcchhHHhHHHHhcccc--CcceEEEEcCCEeeccCHHHHhCCC---c-ceEeccCC-----------C----------
Confidence 0 12589999999987 4899999999999999999999997 3 45554321 1
Q ss_pred CCCCcceeeeeEEEecHHHHhcChHHHHHHHHHHhccccccCCCCccHHHHHhcc-----ceeecCcccccccCC-CCcc
Q 018535 223 GRDPCYFNTGVMVMNVEKWRQGGYSQRVEEWMVVQKQKRIYHLGSLPPFLLVLAG-----NIKGVDHRWNQHGLG-GDNI 296 (354)
Q Consensus 223 ~~~~~yFNSGVmLinl~k~R~~~i~~~~~~~~~~~~~~~~~~~~DQd~LN~vf~~-----~i~~Lp~~wN~~~~~-~~~~ 296 (354)
+.||||||||||+++ ++.++++++++.. ..+.++||++||.+|.+ +++.||.+||++... +...
T Consensus 130 ---~~~fNsGv~li~p~~----~~~~~l~~~~~~~---~~~~~~DQd~LN~~f~~w~~~~~~~~Lp~~yN~~~~~~y~~~ 199 (263)
T 3u2u_A 130 ---PDCFNSGVFVYQPSV----ETYNQLLHLASEQ---GSFDGGDQGILNTFFSSWATTDIRKHLPFIYNLSSISIYSYL 199 (263)
T ss_dssp ---TTSEEEEEEEECCCH----HHHHHHHHHHHHH---CCTTSSHHHHHHHHTTTTTTSCGGGBCCGGGSEEHHHHHSSH
T ss_pred ---CccccCeEEEEcccH----HHHHHHHHHHHhc---CCCCcccHHHHHHHhccccccCeeEeCCcccccccchhcccc
Confidence 369999999999864 4567777777642 23567999999999987 789999999997421 1111
Q ss_pred ccccccCCCCCCEEEEcCCCCCCCCCC
Q 018535 297 EGKCRNLHPGPISLLHWSGKGKPWLRL 323 (354)
Q Consensus 297 ~~~~~~~~~~~~~IIHf~g~~KPW~~~ 323 (354)
+ ..... .++++||||+|+.|||+..
T Consensus 200 ~-~~~~~-~~~~~IIHf~g~~KPW~~~ 224 (263)
T 3u2u_A 200 P-AFKVF-GASAKVVHFLGRVKPWNYT 224 (263)
T ss_dssp H-HHHHH-GGGCSEEECCSSSCGGGSE
T ss_pred H-HHHhh-cCCeEEEEECCCCcCCCCC
Confidence 1 11111 2457999999999999874
No 5
>1o7q_A N-acetyllactosaminide alpha-1,3- galactosyltransferase; 3-galactosyltransferase-UDP complex, glycosyltransferase, glycoprotein, transmembrane; HET: GAL NAG UDP; 1.3A {Bos taurus} SCOP: c.68.1.9 PDB: 1gwv_A* 1gx0_A* 1gww_A* 1k4v_A* 1gx4_A* 2jco_A 1g8o_A* 1fg5_N* 1g93_A* 2wgz_A* 1o7o_A* 2vs4_A* 2jck_A* 2jcl_A 2vfz_A* 2vs3_A* 1vzu_A* 1vzx_A* 1vzt_A* 2jcj_A* ...
Probab=90.47 E-value=10 Score=34.64 Aligned_cols=204 Identities=14% Similarity=0.148 Sum_probs=113.5
Q ss_pred CceEEEEEeCcchh-hhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHHhhCCcceEEEEEecccccccccchhHH
Q 018535 64 QTIHITMTLDANYL-RGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTFPYLNLKVYKFDSNRVRGKISKSIR 142 (354)
Q Consensus 64 ~~i~I~~~~D~~yl-~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~~~~~~~~i~~~~~~~~~~~~~is~~~~ 142 (354)
-+|-|.+.+-+.|. ..+.--+.|.-+|=-...++.++|++|..+.- ..+ ...+.-++++..+..+. +.+....
T Consensus 48 ~tIGl~vfa~GkY~~~fl~~Fl~SAEk~Fm~g~~v~YYVFTD~~~~~--p~v-~l~~~r~~~V~~i~~~~---~W~d~sm 121 (289)
T 1o7q_A 48 ITVGLTVFAVGRYIEHYLEEFLTSANKHFMVGHPVIFYIMVDDVSRM--PLI-ELGPLRSFKVFKIKPEK---RWQDISM 121 (289)
T ss_dssp CCEEEEEEECTTHHHHHHHHHHHHHHHHBSTTSCEEEEEEESCGGGC--CCC-CCCTTEEEEEEECCCCS---SHHHHHH
T ss_pred CeEEEEEEEecccHHHHHHHHHHHHHHhccCCCeEEEEEEeCChhhC--Ccc-ccCCCCeEEEEEecccc---CCchhHH
Confidence 56777777888999 88889999998886545779999999976310 000 01122235566554321 1221110
Q ss_pred hhccCchhhHHHhhhhhcccccCeEEEEecceEEeccHHHHHhcCCCCCeEEeecccccCcccccccc--cc---cchhh
Q 018535 143 QALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDDIGKLWDVDLEGRVLAAPEYCHANFTNFFTDL--FW---SDRNL 217 (354)
Q Consensus 143 ~~~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~Dl~eL~~~dl~g~~iAAv~d~~~~~~~~~~~~--~~---~~~~~ 217 (354)
.++ ..+.+.-..+++. ++|-+.++|+|+++.+++..= .| |..+|.-. .. ||... .+ +.|.-
T Consensus 122 ~Rm---~~i~~~~~~~~~~-evDYLf~~dvd~~F~~~vG~E---~L-g~lv~~lH---p~---~y~~~~~~fpYERrp~S 187 (289)
T 1o7q_A 122 MRM---KTIGEHIVAHIQH-EVDFLFCMDVDQVFQDKFGVE---TL-GESVAQLQ---AW---WYKADPNDFTYERRKES 187 (289)
T ss_dssp HHH---HHHHHHHHHTHHH-HCSEEEEECSSEEECSCBCGG---GC-SSEEEEEC---TT---TTTSCGGGSCCCCCTTS
T ss_pred HHH---HHHHHHHHHHHhh-cCCEEEEeeCCcEeeccCCHH---HH-HHHHHccC---HH---HhCCCCCCCCCCCCcCc
Confidence 110 1223333344555 699999999999999988631 23 45666532 11 12111 11 11111
Q ss_pred hccc--CCCCCcceeeeeEEEecHHHHhcChHHHHHHHHHHhccccc-cCCCCccHHHHHh--ccceeecCccccccc
Q 018535 218 AKTF--DGRDPCYFNTGVMVMNVEKWRQGGYSQRVEEWMVVQKQKRI-YHLGSLPPFLLVL--AGNIKGVDHRWNQHG 290 (354)
Q Consensus 218 ~~~~--~~~~~~yFNSGVmLinl~k~R~~~i~~~~~~~~~~~~~~~~-~~~~DQd~LN~vf--~~~i~~Lp~~wN~~~ 290 (354)
..+ .+.+..|+-+|+.==-.+..-+ +++.+.+-|..-..+.+ -...|..-||..| +...+.|+++|++..
T Consensus 188 -~AyIp~~eGdfYY~Ga~fGGt~~~vl~--l~~~c~~~i~~D~~n~I~A~wHDESHLNKYf~~~KPtKvLSPEY~wd~ 262 (289)
T 1o7q_A 188 -AAYIPFGEGDFYYHAAIFGGTPTQVLN--ITQECFKGILKDKKNDIEAQWHDESHLNKYFLLNKPTKILSPEYCWDY 262 (289)
T ss_dssp -TTCCCTTCCSCCEEEEEEEECHHHHHH--HHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHSCCSEEECGGGSBCG
T ss_pred -eeeecCCCCCEEEEceeeCCcHHHHHH--HHHHHHHHHHHHHhCCeEEEecchhhhhHHHhhcCCCEEECHHHCCCc
Confidence 111 2455778888877544444332 55555554443222222 1234666799763 455788999999753
No 6
>3ioh_A Histo-blood group ABO system transferase; GTA, cisab mutant, AA(Gly)B, rossman fold, unliganded, conformation, blood group antigen, glycoprotein; HET: GOL; 1.25A {Homo sapiens} SCOP: c.68.1.9 PDB: 3ioi_A* 3ioj_A* 3u0y_A* 3u0x_A* 1zhj_A* 2o1h_A* 2o1g_A* 3sx5_A* 3sx3_A* 2o1f_A 2rj6_A* 2rj5_A* 2rj7_A* 1zi4_A* 2y7a_A* 3sxb_A* 3sxa_A* 2riz_A 2rj0_A* 2rj1_A* ...
Probab=85.28 E-value=22 Score=32.54 Aligned_cols=203 Identities=11% Similarity=0.136 Sum_probs=107.7
Q ss_pred CceEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHHhhCCcceEEEEEecccccccccchhHHh
Q 018535 64 QTIHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTFPYLNLKVYKFDSNRVRGKISKSIRQ 143 (354)
Q Consensus 64 ~~i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~~~~~~~~i~~~~~~~~~~~~~is~~~~~ 143 (354)
-+|-+++.+-+.|...+.--+.|.-+|=-...++.++|++|..+. + ..+ ..-+.-++++..+... .+.......
T Consensus 58 ~tIGl~vfA~GkY~~fl~~Fl~SAek~Fm~g~~V~YYVFTD~~~~-v-P~v-~l~~~r~~~V~~v~~~---~~Wqd~sm~ 131 (298)
T 3ioh_A 58 TTIGLTVFAIKKYVAFLKLFLETAEKHFMVGHRVHYYVFTDQPAA-V-PRV-TLGTGRQLSVLEVRAY---KRWQDVSMR 131 (298)
T ss_dssp CEEEEEEEECGGGGGGHHHHHHHHHHHBSTTSEEEEEEEESCGGG-S-CCC-CCCTTEEEEEEECCCC---SSHHHHHHH
T ss_pred CcEEEEEEEeCcHHHHHHHHHHhHHHhccCCceEEEEEEeCChhh-C-Ccc-ccCCCCeEEEEEeccc---cCCccccHH
Confidence 567777778889999999999999998766678999999997532 0 000 0112334555555321 112211000
Q ss_pred hccCchhhHHHhhhhhcccccCeEEEEecceEEeccHHHHHhcCCCCCeEEeecccccCcccccccc--cc---cchhhh
Q 018535 144 ALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDDIGKLWDVDLEGRVLAAPEYCHANFTNFFTDL--FW---SDRNLA 218 (354)
Q Consensus 144 ~~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~Dl~eL~~~dl~g~~iAAv~d~~~~~~~~~~~~--~~---~~~~~~ 218 (354)
++ ..+..+-...++- ++|-+..+|+|+++.+++.. +.=|..+|.. +.. ||... .+ +.+.-
T Consensus 132 Rm---~~i~~~~~~~~~~-EvDyLfc~dvd~~F~~~vG~----E~Lg~lva~l---Hp~---~y~~~~~~FpYERrp~S- 196 (298)
T 3ioh_A 132 RM---EMISDFCERRFLS-EVDYLVCVDVDMEFRDHVGV----EILTPLFGTL---HPG---FYGSSREAFTYERRPQS- 196 (298)
T ss_dssp HH---HHHHHHHHHTHHH-HCSEEEEEESSEEECSCBCG----GGCSSEEEEB---CTT---TTTSCGGGSCCCCCTTS-
T ss_pred HH---HHHHHHHHHHHhh-cCCEEEEecCCCeeccCccH----HHhHhhHhhc---Chh---hhcCCcccCcccCCccc-
Confidence 00 1222222333454 69999999999999998762 1113455542 221 11111 01 11111
Q ss_pred ccc--CCCCCcceeeeeEEEecHHHHhcChHHHHHHHHHHhccccc-cCCCCccHHHHHh--ccceeecCcccccc
Q 018535 219 KTF--DGRDPCYFNTGVMVMNVEKWRQGGYSQRVEEWMVVQKQKRI-YHLGSLPPFLLVL--AGNIKGVDHRWNQH 289 (354)
Q Consensus 219 ~~~--~~~~~~yFNSGVmLinl~k~R~~~i~~~~~~~~~~~~~~~~-~~~~DQd~LN~vf--~~~i~~Lp~~wN~~ 289 (354)
..+ .+.+..|+-+|+.==-.....+ +++.|.+-+..-..+.+ --..|..-||..| +...+.|+++|++.
T Consensus 197 ~AyIp~~eGdfYY~ga~fGGt~~~vl~--Lt~~C~~~i~~D~~n~IeA~WhDESHLNKYfl~hKPtKvLSPEY~Wd 270 (298)
T 3ioh_A 197 QAYIPKDEGDFYYGGAFFGGSVQEVQR--LTRACHQAMMVDQANGIEAVWHDESHLNKYLLRHKPTKVLSPEYLWD 270 (298)
T ss_dssp TTCCCTTCCSCCBCTTEEEEEHHHHHH--HHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHSCCSEEECGGGSBC
T ss_pred cccccCCCCCeEEeeeecCCcHHHHHH--HHHHHHHHHHHHHhCCceEeccchhhhhhhhhhcCCCceeCHHHcCC
Confidence 111 1344566666655323333222 44555544432222222 1234666799764 34578999999875
No 7
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=79.29 E-value=23 Score=30.39 Aligned_cols=108 Identities=15% Similarity=0.174 Sum_probs=59.6
Q ss_pred ceEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHHhhCCcceEEEEEecccccccc-cchhHHh
Q 018535 65 TIHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTFPYLNLKVYKFDSNRVRGK-ISKSIRQ 143 (354)
Q Consensus 65 ~i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~~~~~~~~i~~~~~~~~~~~~~-is~~~~~ 143 (354)
.|-|++.+= |-...+.-++.||+..+- .++.+.|+.++.+++..+.+++.-...+++++..+....... -+.+
T Consensus 2 ~vSViIp~y-n~~~~l~~~l~Sl~~q~~--~~~eiivvDd~S~d~t~~~~~~~~~~~~i~~i~~~~~~~~~~~~n~G--- 75 (255)
T 1qg8_A 2 KVSVIMTSY-NKSDYVAKSISSILSQTF--SDFELFIMDDNSNEETLNVIRPFLNDNRVRFYQSDISGVKERTEKTR--- 75 (255)
T ss_dssp CEEEEEEES-SCTTTHHHHHHHHHTCSC--CCEEEEEEECSCCHHHHHHHGGGGGSTTEEEEECCCCSHHHHHSSCH---
T ss_pred eEEEEEEcC-CCHHHHHHHHHHHHhccC--CceEEEEEECCCCchHHHHHHHHhhcCCEEEEecccccccccccccC---
Confidence 356666553 234667789999988764 358888888877665555555421122455554321000000 0001
Q ss_pred hccCchhhHHHhhhhhcccccCeEEEEecceEEecc-HHHHHh
Q 018535 144 ALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDD-IGKLWD 185 (354)
Q Consensus 144 ~~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~D-l~eL~~ 185 (354)
...+|-..-+.. .-+-|++||+|.++..+ |..+.+
T Consensus 76 -----~~~a~N~gi~~a--~g~~i~~lD~Dd~~~~~~l~~~~~ 111 (255)
T 1qg8_A 76 -----YAALINQAIEMA--EGEYITYATDDNIYMPDRLLKMVR 111 (255)
T ss_dssp -----HHHHHHHHHHHC--CCSEEEEEETTEEECTTHHHHHHH
T ss_pred -----HHHHHHHHHHHc--CCCEEEEeCCCCccChHHHHHHHH
Confidence 123333333333 35899999999999865 555544
No 8
>4ayl_A BOGT-metal-independent glycosyltransferase; histo-blood group enzyme; HET: EPE; 1.92A {Bacteroides ovatus} PDB: 4ayj_A*
Probab=74.27 E-value=48 Score=29.55 Aligned_cols=202 Identities=11% Similarity=0.089 Sum_probs=102.2
Q ss_pred ceEEEEEeCcchhhhHHHHHHHHHHhcCCCCc--EEEEEEeCCCcHHHHHHHHhhCCcceEEEEEecccccccccchhHH
Q 018535 65 TIHITMTLDANYLRGTMAAVLSILQHSTCPQN--IEFHFLYSNFEPDVYSSINSTFPYLNLKVYKFDSNRVRGKISKSIR 142 (354)
Q Consensus 65 ~i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~--~~fhil~~~~s~~~~~~L~~~~~~~~i~~~~~~~~~~~~~is~~~~ 142 (354)
+|-|++.+-..|...+.--+.|.-+|=-.... +.++|++|..+. +.. -+.-.+.+.. .+ ...++....
T Consensus 2 tIGl~vfA~GkY~~fl~~Fl~SAek~Fm~g~~~~V~yYVFTD~~~~-----vp~-~~~~~v~~~~--~~--~~~Wqd~sm 71 (246)
T 4ayl_A 2 RIGILYICTGKYDIFWKDFYLSAERYFMQDQSFIIEYYVFTDSPKL-----YDE-ENNKHIHRIK--QK--NLGWPDNTL 71 (246)
T ss_dssp EEEEEEECCGGGGGGHHHHHHHHHHHBSCSTTSEEEEEEEESCSCC-----TTT-TTCTTEEEEE--CC--CCCTTHHHH
T ss_pred eEEEEEEEeCcHHHHHHHHHHhHHHhccCCCccceEEEEEeCChhh-----CCc-CCCceEEEEe--CC--cCCCcccch
Confidence 46677778889999999999999998766678 999999997642 000 0011222221 11 112222111
Q ss_pred hhccCchhhHHHhhhhhcccccCeEEEEecceEEeccHHHHHhcCC-CCCeEEeecccccCcccccccc--cc---cchh
Q 018535 143 QALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDDIGKLWDVDL-EGRVLAAPEYCHANFTNFFTDL--FW---SDRN 216 (354)
Q Consensus 143 ~~~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~Dl~eL~~~dl-~g~~iAAv~d~~~~~~~~~~~~--~~---~~~~ 216 (354)
.++ ..+.+. ...+. .++|-+..+|+|+++.+++..=-=+.. +|..+|.-. +. ||... .+ +.|.
T Consensus 72 ~Rm---~~i~~~-~~~~~-~evDyLf~~dvd~~F~~~vG~E~L~p~~~~~lva~lH---p~---~y~~~~~~fpYERrp~ 140 (246)
T 4ayl_A 72 KRF---HIFLRI-KEQLE-RETDYLFFFNANLLFTSPIGKEILPPSDSNGLLGTMH---PG---FYNKPNSEFTYERRDA 140 (246)
T ss_dssp THH---HHHHTT-HHHHH-HHCSEEEEECTTEEECSCBCGGGSCCTTSCCEEEEBC---GG---GC--------------
T ss_pred HHH---HHHHHH-HHHHH-hhCCEEEEEeCCceeeccCCHHHcccCCCCCEEEEec---hh---hhCCCcccCcccCCcc
Confidence 111 123333 34444 369999999999999999873110122 244565532 11 11111 01 1111
Q ss_pred hhccc--CCCCCcceeeeeEEEecHHHHhcChHHHHHHHHHHhccccc-cCCCCccHHHHHhc-cceee-cCccccccc
Q 018535 217 LAKTF--DGRDPCYFNTGVMVMNVEKWRQGGYSQRVEEWMVVQKQKRI-YHLGSLPPFLLVLA-GNIKG-VDHRWNQHG 290 (354)
Q Consensus 217 ~~~~~--~~~~~~yFNSGVmLinl~k~R~~~i~~~~~~~~~~~~~~~~-~~~~DQd~LN~vf~-~~i~~-Lp~~wN~~~ 290 (354)
- ..+ .+.+..|+-+|+.==-.....+ +++.+.+-+..-..+.+ -...|..-||..|- .+-+. |+++|++..
T Consensus 141 S-~AyIp~~eGdfYY~ga~fGG~~~~vl~--Lt~~c~~~i~~D~~n~I~A~whDESHLNKYfl~~KP~~vLSPEY~wd~ 216 (246)
T 4ayl_A 141 S-TAYIPEGEGRYYYAGGLSGGCTKAYLK--LCTTICSWVDRDATNHIIPIWHDESLINKYFLDNPPAITLSPAYLYPE 216 (246)
T ss_dssp -----------CCCBCSSEEEEEHHHHHH--HHHHHHHHHHHHHTTCSSCSCCHHHHHHHHHHHSCCSEEECGGGGEET
T ss_pred c-cccccCCCCCeEEeeeecCCcHHHHHH--HHHHHHHHHHHHHhCCceEeccchhHhHHHHHhCCCCeeeCHHHcCCc
Confidence 0 111 1334566666655333333332 45555555443222222 12456667997643 44444 999998753
No 9
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=68.31 E-value=18 Score=34.79 Aligned_cols=105 Identities=15% Similarity=0.131 Sum_probs=58.1
Q ss_pred CceEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcH-H---HHHHHHhhCCcceEEEEEecccccccccch
Q 018535 64 QTIHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEP-D---VYSSINSTFPYLNLKVYKFDSNRVRGKISK 139 (354)
Q Consensus 64 ~~i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~-~---~~~~L~~~~~~~~i~~~~~~~~~~~~~is~ 139 (354)
..+-|++.+=..-...+.-++.||++.+..+..+.+.|+.++.++ + ..+.+.+.++. ++++...+.. .+
T Consensus 29 p~vSVIIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~~~-~v~vi~~~~n--~G---- 101 (472)
T 1xhb_A 29 PTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKV-PVHVIRMEQR--SG---- 101 (472)
T ss_dssp CCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSS-CEEEEECSSC--CC----
T ss_pred CCeEEEEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHHHCCC-cEEEEECCCC--CC----
Confidence 457777766433336677899999998753222566767665543 2 22333334541 3555543211 11
Q ss_pred hHHhhccCchhhHHHhhhhhcccccCeEEEEecceEEec-cHHHHHhc
Q 018535 140 SIRQALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVD-DIGKLWDV 186 (354)
Q Consensus 140 ~~~~~~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~-Dl~eL~~~ 186 (354)
..-+|-..-+.. .-+-|++||+|+++.. -|.+|.+.
T Consensus 102 ---------~~~a~N~g~~~A--~gd~i~flD~D~~~~p~~L~~ll~~ 138 (472)
T 1xhb_A 102 ---------LIRARLKGAAVS--RGQVITFLDAHCECTAGWLEPLLAR 138 (472)
T ss_dssp ---------HHHHHHHHHHHC--CSSEEEEEESSEEECTTCHHHHHHH
T ss_pred ---------hHHHHHHHHHhc--cCCeEEEECCCeEeCccHHHHHHHH
Confidence 122333323333 3589999999999874 46666653
No 10
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=63.41 E-value=32 Score=34.26 Aligned_cols=103 Identities=17% Similarity=0.197 Sum_probs=58.2
Q ss_pred CceEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHH-HHHH---HhhCCcceEEEEEecccccccccch
Q 018535 64 QTIHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDV-YSSI---NSTFPYLNLKVYKFDSNRVRGKISK 139 (354)
Q Consensus 64 ~~i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~-~~~L---~~~~~~~~i~~~~~~~~~~~~~is~ 139 (354)
..+-|++.+=..-+..+.-+|.||++.+..+..+.+.|+.++.++.. .+.+ .+.++ ++++...+.. .+
T Consensus 112 P~vSVIIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~~--~v~vi~~~~n--~G---- 183 (570)
T 2d7i_A 112 PNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALFP--SVRILRTKKR--EG---- 183 (570)
T ss_dssp CCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTST--TEEEEECSSC--CC----
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhCC--eEEEEECCCC--CC----
Confidence 45778876643445777889999999876322246666666553322 2233 23344 3555543211 01
Q ss_pred hHHhhccCchhhHHHhhhhhcccccCeEEEEecceEEec-cHHHHHh
Q 018535 140 SIRQALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVD-DIGKLWD 185 (354)
Q Consensus 140 ~~~~~~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~-Dl~eL~~ 185 (354)
..-+|....+.. .-+-|++||+|+++.. -|.+|.+
T Consensus 184 ---------~~~A~N~G~~~A--~gd~i~fLD~D~~~~p~~L~~ll~ 219 (570)
T 2d7i_A 184 ---------LIRTRMLGASVA--TGDVITFLDSHCEANVNWLPPLLD 219 (570)
T ss_dssp ---------HHHHHHHHHHHC--CSSEEEECCSSEEECTTCSHHHHH
T ss_pred ---------HHHHHHHHHHhc--CCCEEEEEcCCccccccHHHHHHH
Confidence 122333333333 3489999999999974 4555554
No 11
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=61.95 E-value=34 Score=33.20 Aligned_cols=103 Identities=17% Similarity=0.162 Sum_probs=57.6
Q ss_pred CceEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcH-HHHHHHHhhCCcceEEEEEecccccccccchhHH
Q 018535 64 QTIHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEP-DVYSSINSTFPYLNLKVYKFDSNRVRGKISKSIR 142 (354)
Q Consensus 64 ~~i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~-~~~~~L~~~~~~~~i~~~~~~~~~~~~~is~~~~ 142 (354)
..+-|++.+=..-...+.-+|.||+..+..+..+.+.|+.++.++ .+...+ +.++. +++...+.. .+
T Consensus 66 p~vSVIIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~~-~~~~~--v~vi~~~~n-------~G-- 133 (501)
T 2ffu_A 66 PATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALL-GKIEK--VRVLRNDRR-------EG-- 133 (501)
T ss_dssp CCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHGG-GGBTT--EEEEECSSC-------CH--
T ss_pred CCEEEEEEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHHH-hcCCC--EEEEECCCC-------cC--
Confidence 357787765422222567889999998763222567767666543 233333 33443 444443211 01
Q ss_pred hhccCchhhHHHhhhhhcccccCeEEEEecceEEe-ccHHHHHhc
Q 018535 143 QALDQPLNYARIYLADIMPANVKRVIYLDSDLVVV-DDIGKLWDV 186 (354)
Q Consensus 143 ~~~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~-~Dl~eL~~~ 186 (354)
...+|...-+.. .-+-|++||+|.++. +-|.+|.+.
T Consensus 134 ------~~~A~N~G~~~A--~gd~i~flD~D~~~~p~~L~~ll~~ 170 (501)
T 2ffu_A 134 ------LMRSRVRGADAA--QAKVLTFLDSHCECNEHWLEPLLER 170 (501)
T ss_dssp ------HHHHHHHHHHHC--CSSEEEECCSSEEECTTCHHHHHHH
T ss_pred ------HHHHHHHHHHhc--CCCEEEEECCCcccCccHHHHHHHH
Confidence 123333333333 348999999999997 446666653
No 12
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=59.79 E-value=44 Score=34.85 Aligned_cols=45 Identities=4% Similarity=-0.188 Sum_probs=28.4
Q ss_pred CceEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcH
Q 018535 64 QTIHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEP 108 (354)
Q Consensus 64 ~~i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~ 108 (354)
..+-|++.+=..-..-+..++.|+++.+-.+..+.+.|+.|+.++
T Consensus 140 P~VSViIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD 184 (802)
T 4hg6_A 140 PTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTD 184 (802)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHH
T ss_pred CcEEEEEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCc
Confidence 468888766322223336788999875543345788888887643
No 13
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=56.41 E-value=82 Score=29.34 Aligned_cols=109 Identities=15% Similarity=0.162 Sum_probs=56.7
Q ss_pred eEEE-EEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHHhhCCcceEEEEEe-cccccccccchhHHh
Q 018535 66 IHIT-MTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTFPYLNLKVYKF-DSNRVRGKISKSIRQ 143 (354)
Q Consensus 66 i~I~-~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~~~~~~~~i~~~~~-~~~~~~~~is~~~~~ 143 (354)
++|+ ++++.- . +.-++.||++..+..+...+.|..|+..++.++.+++ |.. .++.... +.... ..+..
T Consensus 4 ~pViI~~yNRp--~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~~~vi~~-~~~-~I~~~~~~d~~~~--~~~~~--- 73 (343)
T 1fo8_A 4 IPILVIACDRS--T-VRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQVIAS-YGS-AVTHIRQPDLSNI--AVQPD--- 73 (343)
T ss_dssp CCEEEEESSCT--T-HHHHHHHHHHHCSCTTTSCEEEEECTTCHHHHHHHHT-TGG-GSEEEECSCCCCC--CCCTT---
T ss_pred ccEEEEECCcH--H-HHHHHHHHHhcCCCcCCcEEEEEECCCCHHHHHHHHH-cCC-ceEEEEcCCcccc--ccchh---
Confidence 3455 455544 4 7889999999874333344555556666677776654 321 2332211 11100 00110
Q ss_pred hccCchhhHHH------hhhhhcc-cccCeEEEEecceEEeccHHHHHh
Q 018535 144 ALDQPLNYARI------YLADIMP-ANVKRVIYLDSDLVVVDDIGKLWD 185 (354)
Q Consensus 144 ~~~s~~~y~Rl------~i~~llp-~~~dRvLYLD~D~IV~~Dl~eL~~ 185 (354)
+.. ..+|+|+ -+-.++. ...++||.||.|+++--|.=+-++
T Consensus 74 N~g-~~~y~~ia~h~~~al~~vf~~~~~~~vIiLEDDl~~spdF~~y~~ 121 (343)
T 1fo8_A 74 HRK-FQGYYKIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQ 121 (343)
T ss_dssp CGG-GHHHHHHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHHHHHH
T ss_pred hcC-cccchhHhHHHHHHHHHHHHhccCCEEEEEcCCCeECHHHHHHHH
Confidence 000 0123222 2233332 037999999999999988765443
No 14
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=55.50 E-value=83 Score=26.32 Aligned_cols=99 Identities=17% Similarity=0.246 Sum_probs=56.1
Q ss_pred CceEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcH---HHHHHHHhhCCcceEEEEEecccccccccchh
Q 018535 64 QTIHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEP---DVYSSINSTFPYLNLKVYKFDSNRVRGKISKS 140 (354)
Q Consensus 64 ~~i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~---~~~~~L~~~~~~~~i~~~~~~~~~~~~~is~~ 140 (354)
..+-|++.+= |-...+.-++.||+..+- .++.+.|+.++.++ +..+.+.+.++. +++.. .+. .+ .
T Consensus 5 p~vsViIp~y-n~~~~l~~~l~Sl~~q~~--~~~eiIvvDd~S~d~t~~~~~~~~~~~~~--i~~i~--~~n-~G-~--- 72 (240)
T 3bcv_A 5 PKVSVIVPIY-NVEKYLDQCVQALLAQTL--SDIEIILIDDESPDNCPKICDDYAAQYPN--IKVIH--KKN-AG-L--- 72 (240)
T ss_dssp CSEEEEEEES-SCTTTHHHHHHHHHTCSS--SSEEEEEEECCCSSSHHHHHHHHHHHCSS--EEEEE--CCC-CC-H---
T ss_pred CcEEEEEecC-CCHHHHHHHHHHHHhCcC--CCeEEEEEECCCCcCHHHHHHHHHhhCCC--EEEEE--CCC-CC-h---
Confidence 3577777653 223566789999988764 35788877776543 333334344554 44443 111 11 1
Q ss_pred HHhhccCchhhHHHhhhhhcccccCeEEEEecceEEecc-HHHHHh
Q 018535 141 IRQALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDD-IGKLWD 185 (354)
Q Consensus 141 ~~~~~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~D-l~eL~~ 185 (354)
+.+|-..-+.. .-+-|++||+|.++..+ |..|.+
T Consensus 73 ---------~~a~N~g~~~a--~g~~i~~lD~Dd~~~~~~l~~l~~ 107 (240)
T 3bcv_A 73 ---------GMACNSGLDVA--TGEYVAFCDSDDYVDSDMYMTMYN 107 (240)
T ss_dssp ---------HHHHHHHHHHC--CSSEEEECCTTCCCCTTHHHHHHH
T ss_pred ---------HHHHHHHHHHc--CCCEEEEECCCCcCCHHHHHHHHH
Confidence 22232222333 24899999999998755 455544
No 15
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=52.36 E-value=88 Score=31.02 Aligned_cols=104 Identities=12% Similarity=0.061 Sum_probs=58.3
Q ss_pred CceEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHHhhCCcceEEEEEecccccccccchhHHh
Q 018535 64 QTIHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSINSTFPYLNLKVYKFDSNRVRGKISKSIRQ 143 (354)
Q Consensus 64 ~~i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~~~~~~~~i~~~~~~~~~~~~~is~~~~~ 143 (354)
..+.|++.+=.. ...+..++.|++..... ..+.+.|+.++.+++..+.+++.-....+++...... + ...
T Consensus 93 p~vsviIp~~n~-~~~l~~~l~sl~~q~~~-~~~eiivvDd~s~d~t~~~~~~~~~~~~i~~i~~~~~---~-~g~---- 162 (625)
T 2z86_A 93 DGLSIVIPTYNR-AKILAITLACLCNQKTI-YDYEVIVADDGSKENIEEIVREFESLLNIKYVRQKDY---G-YQL---- 162 (625)
T ss_dssp CCEEEEEEESSC-HHHHHHHHHHHHTCCCS-SCEEEEEEEESCSSCHHHHHHTTTTTSCEEEEEECCC---S-CCH----
T ss_pred CcEEEEEecCCc-HHHHHHHHHHHHhhccC-CCeEEEEEeCCCchhHHHHHHHhhhcCCeEEEEeCCC---C-cch----
Confidence 357777755322 46677899999987542 3688888887765544444544222224444432110 0 000
Q ss_pred hccCchhhHHHhhhhhcccccCeEEEEecceEEecc-HHHHHh
Q 018535 144 ALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDD-IGKLWD 185 (354)
Q Consensus 144 ~~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~D-l~eL~~ 185 (354)
+.+|-..-+.. .-+-|++||+|.++..+ |..+..
T Consensus 163 ------~~a~N~g~~~a--~g~~v~~lD~D~~~~~~~l~~~~~ 197 (625)
T 2z86_A 163 ------CAVRNLGLRAA--KYNYVAILDCDMAPNPLWVQSYME 197 (625)
T ss_dssp ------HHHHHHHHHHC--CSSEEEEECTTEEECTTHHHHHHH
T ss_pred ------hHHHHHHHHhC--CcCEEEEECCCCCCCHHHHHHHHH
Confidence 12222222222 35899999999999755 445544
No 16
>3arc_T Photosystem II reaction center protein T; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_T* 2axt_T* 3bz1_T* 3bz2_T* 3kzi_T* 3prq_T* 3prr_T* 3a0b_T* 3a0h_T*
Probab=31.63 E-value=34 Score=20.42 Aligned_cols=15 Identities=33% Similarity=0.616 Sum_probs=9.4
Q ss_pred chHHHHHHHHHHHHH
Q 018535 4 TSTFIFIGLLSLLLS 18 (354)
Q Consensus 4 ~~~~~~~~~~~~~~~ 18 (354)
.-||++.+.+..+++
T Consensus 5 vYt~ll~~tlgiiFF 19 (32)
T 3arc_T 5 TYVFIFACIIALFFF 19 (32)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 346777776666655
No 17
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=27.06 E-value=2.6e+02 Score=27.49 Aligned_cols=99 Identities=18% Similarity=0.178 Sum_probs=54.5
Q ss_pred CceEEEEEeCcchhhhHHHHHHHHHHhcCCCCcEEEEEEeCCCcHHHHHHHH---hhCCcceEEEEEecccccccccchh
Q 018535 64 QTIHITMTLDANYLRGTMAAVLSILQHSTCPQNIEFHFLYSNFEPDVYSSIN---STFPYLNLKVYKFDSNRVRGKISKS 140 (354)
Q Consensus 64 ~~i~I~~~~D~~yl~~~~v~i~Si~~~~~~~~~~~fhil~~~~s~~~~~~L~---~~~~~~~i~~~~~~~~~~~~~is~~ 140 (354)
..|.|++.+= |-...+.-+|.|++..+- .++.+.|+.++.++...+.++ +.++. +++.. ..+ .+ +
T Consensus 375 ~~vsiii~~y-n~~~~l~~~l~s~~~q~~--~~~eiivvdd~S~d~t~~~~~~~~~~~~~--i~~~~-~~n--~G-~--- 442 (625)
T 2z86_A 375 PLVSIYIPAY-NCSKYIVRCVESALNQTI--TDLEVCICDDGSTDDTLRILQEHYANHPR--VRFIS-QKN--KG-I--- 442 (625)
T ss_dssp CSEEEEEEES-SCTTTHHHHHHHHHSSSC--CSEEEEEEEESCSSSHHHHHHHHHTTCTT--EEEEE-ECC--CC-H---
T ss_pred CeEEEEEeCC-CCHHHHHHHHHHHHhCcC--CCeEEEEEECcCChhHHHHHHHHHhhCCc--EEEEe-CCC--CC-H---
Confidence 3577777653 234667788999987664 357887777765432222232 33443 44443 111 11 1
Q ss_pred HHhhccCchhhHHHhhhhhcccccCeEEEEecceEEecc-HHHHHh
Q 018535 141 IRQALDQPLNYARIYLADIMPANVKRVIYLDSDLVVVDD-IGKLWD 185 (354)
Q Consensus 141 ~~~~~~s~~~y~Rl~i~~llp~~~dRvLYLD~D~IV~~D-l~eL~~ 185 (354)
..+|-..-+.. .-+-|++||+|.++..+ |..+.+
T Consensus 443 ---------~~a~n~g~~~a--~g~~i~~ld~D~~~~~~~l~~~~~ 477 (625)
T 2z86_A 443 ---------GSASNTAVRLC--RGFYIGQLDSDDFLEPDAVELCLD 477 (625)
T ss_dssp ---------HHHHHHHHHHC--CSSEEEECCTTCEECTTHHHHHHH
T ss_pred ---------HHHHHHHHHhc--CCCEEEEECCCcccChhHHHHHHH
Confidence 11222222222 34789999999998755 455543
Done!