Query 018537
Match_columns 354
No_of_seqs 82 out of 84
Neff 3.7
Searched_HMMs 13730
Date Mon Mar 25 16:49:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018537.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/018537hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1bhga3 c.1.8.3 (A:329-632) be 39.5 3.2 0.00023 34.2 0.2 40 118-157 36-75 (304)
2 d1i4aa_ a.65.1.1 (A:) Annexin 38.3 1.2E+02 0.0085 26.2 11.1 86 238-339 181-266 (309)
3 d1jz8a5 c.1.8.3 (A:334-625) be 34.2 6.6 0.00048 32.6 1.4 39 118-156 37-75 (292)
4 d2je8a5 c.1.8.3 (A:331-678) Fi 28.5 11 0.00078 31.1 1.8 35 120-155 47-84 (348)
5 d1yq2a5 c.1.8.3 (A:313-609) be 22.5 13 0.00093 31.1 1.2 39 118-156 36-74 (297)
6 d1zxoa2 c.55.1.5 (A:107-280) H 20.6 71 0.0052 25.3 5.5 19 141-159 139-157 (174)
7 d1v54m_ f.23.7.1 (M:) Mitochon 19.6 31 0.0023 23.0 2.4 14 302-315 22-35 (43)
8 d1x3zb1 a.189.1.1 (B:253-309) 18.5 15 0.0011 25.6 0.6 47 71-120 6-53 (57)
9 d1or7a2 a.177.1.1 (A:-1-111) S 18.4 56 0.0041 23.3 4.0 32 142-177 31-62 (113)
10 d2f96a1 c.55.3.5 (A:19-220) Ri 17.6 32 0.0023 25.8 2.4 32 146-177 158-194 (202)
No 1
>d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.47 E-value=3.2 Score=34.23 Aligned_cols=40 Identities=15% Similarity=0.143 Sum_probs=30.2
Q ss_pred HHHHHHHcccccchhhhhcCCCccHHHHHHHHHhhcCcCC
Q 018537 118 ASLESRFLFLAADARSTLRGWRPSYRNVLLAVRKNLNIPC 157 (354)
Q Consensus 118 ~~Ie~rfrflAaD~~s~LRG~gpsYReVLldVckkLkV~~ 157 (354)
+.++..|+.+-.=++|++|-++..+-+.+++.||++++-.
T Consensus 36 ~~~~~d~~~~k~~G~N~iR~~~~~~~~~~~~~cD~~Gilv 75 (304)
T d1bhga3 36 PLLVKDFNLLRWLGANAFRTSHYPYAEEVMQMCDRYGIVV 75 (304)
T ss_dssp HHHHHHHHHHHHHTCCEEECTTSCCSSTHHHHHSTTCCEE
T ss_pred HHHHHHHHHHHHcCCCEEEecCCCChHHHHHHHHhcCCee
Confidence 3456666666655689999887667788999999998754
No 2
>d1i4aa_ a.65.1.1 (A:) Annexin IV {Cow (Bos taurus) [TaxId: 9913]}
Probab=38.34 E-value=1.2e+02 Score=26.16 Aligned_cols=86 Identities=16% Similarity=0.137 Sum_probs=47.2
Q ss_pred HHHHHHHHHHhHHHHHHHHhhHHHHHHHHHhhhHHHHHhHHHHHHHHHHhhhhhhhhhhHHHHHHHHHhHhHHHHHHHHH
Q 018537 238 VKIYQLLMRNLSGKFFLEAANYQIKKEVLKKGGQLAAINLESRAALLAAKQGFAGAATKYLGLRNMVALLGPVLWGTFLA 317 (354)
Q Consensus 238 ssi~~~l~~~ls~qla~~~A~Yq~Ak~~l~~Gg~~aa~~l~~~~al~aA~rG~~~aAarY~~~Rs~~~llGPilW~wf~a 317 (354)
..+++.+..+=-.|+...+..|+- .-++...-+ +++ -+.+. -..++.--+-.+.-|....-...
T Consensus 181 ~~~i~Il~~rs~~ql~~i~~~Y~~---~~g~~l~~~---i~~---------e~sG~-~~~al~~~v~~~~~p~~~~A~~L 244 (309)
T d1i4aa_ 181 VKFLTVLCSRNRNHLLHVFDEYKR---IAQKDIEQS---IKS---------ETSGS-FEDALLAIVKCMRNKSAYFAERL 244 (309)
T ss_dssp HHHHHHHHHSCHHHHHHHHHHHHH---HHSSCHHHH---HHH---------HCCHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHeeeeeecCCHHHHHHHHHHHHH---HhCccHHHH---HHH---------HcCCc-HHHHHHHHHHHhcCHHHHHHHHH
Confidence 345566677777788888888862 222222222 111 11111 11111111223445666665666
Q ss_pred HHHHHhhcccchHHHHHHHHHH
Q 018537 318 DVVIQMLGTDYARILRAIYAFA 339 (354)
Q Consensus 318 DL~~~aigT~Y~RiIpaI~alA 339 (354)
.-+..=.|||..+.|+.|..=+
T Consensus 245 ~~Am~g~gtd~~~LiriivtR~ 266 (309)
T d1i4aa_ 245 YKSMKGLGTDDDTLIRVMVSRA 266 (309)
T ss_dssp HHHHSSSSCCHHHHHHHHHHHT
T ss_pred HHHccCCCCChHhHhhhhhccc
Confidence 6677778999999999887533
No 3
>d1jz8a5 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3 {Escherichia coli [TaxId: 562]}
Probab=34.23 E-value=6.6 Score=32.60 Aligned_cols=39 Identities=5% Similarity=0.097 Sum_probs=31.7
Q ss_pred HHHHHHHcccccchhhhhcCCCccHHHHHHHHHhhcCcC
Q 018537 118 ASLESRFLFLAADARSTLRGWRPSYRNVLLAVRKNLNIP 156 (354)
Q Consensus 118 ~~Ie~rfrflAaD~~s~LRG~gpsYReVLldVckkLkV~ 156 (354)
+.++..|+.+-.=++|++|-+.....+-+++.||++++-
T Consensus 37 ~~~~~di~l~k~~G~N~iR~~~~p~~~~~~~~~D~~Gil 75 (292)
T d1jz8a5 37 QTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLY 75 (292)
T ss_dssp HHHHHHHHHHHHTTCCEEECTTSCCCHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHHhcCCCEEEecCCCChHHHHHHHhhcCCe
Confidence 455677888877779999988667778899999999874
No 4
>d2je8a5 c.1.8.3 (A:331-678) Five-domain beta-mannosidase, domain 3 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=28.51 E-value=11 Score=31.12 Aligned_cols=35 Identities=14% Similarity=0.186 Sum_probs=22.6
Q ss_pred HHHHHcccccchhhhhc---CCCccHHHHHHHHHhhcCc
Q 018537 120 LESRFLFLAADARSTLR---GWRPSYRNVLLAVRKNLNI 155 (354)
Q Consensus 120 Ie~rfrflAaD~~s~LR---G~gpsYReVLldVckkLkV 155 (354)
++..|+.+-.=++|++| ++-+. .+.++|.||++||
T Consensus 47 ~~~di~l~ke~G~N~IR~~~~~~~p-~~~f~d~cD~~Gi 84 (348)
T d2je8a5 47 YQTLFRDMKEANMNMVRIWGGGTYE-NNLFYDLADENGI 84 (348)
T ss_dssp HHHHHHHHHHTTCCEEEECTTSCCC-CHHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCEEecCCCCCCC-CHHHHHHHHHCCC
Confidence 34444444444477777 33232 6888999999997
No 5
>d1yq2a5 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 {Arthrobacter sp. c2-2 [TaxId: 192168]}
Probab=22.54 E-value=13 Score=31.14 Aligned_cols=39 Identities=10% Similarity=0.056 Sum_probs=30.8
Q ss_pred HHHHHHHcccccchhhhhcCCCccHHHHHHHHHhhcCcC
Q 018537 118 ASLESRFLFLAADARSTLRGWRPSYRNVLLAVRKNLNIP 156 (354)
Q Consensus 118 ~~Ie~rfrflAaD~~s~LRG~gpsYReVLldVckkLkV~ 156 (354)
+.++..|+.+-.=++|++|-+....-+-++|.||+||+-
T Consensus 36 ~~~~~di~l~k~~G~N~iR~~h~p~~~~~~d~cD~~Gil 74 (297)
T d1yq2a5 36 AGAREDLALMKRFNVNAIRTSHYPPHPRLLDLADEMGFW 74 (297)
T ss_dssp HHHHHHHHHHHHTTCCEEEETTSCCCHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHHHCCCCEEEccCCCChHHHHHHHHhcCCE
Confidence 356677777777779999976555667799999999985
No 6
>d1zxoa2 c.55.1.5 (A:107-280) Hypothetical protein BT3618 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=20.64 E-value=71 Score=25.25 Aligned_cols=19 Identities=16% Similarity=0.385 Sum_probs=15.5
Q ss_pred cHHHHHHHHHhhcCcCCCC
Q 018537 141 SYRNVLLAVRKNLNIPCSS 159 (354)
Q Consensus 141 sYReVLldVckkLkV~~s~ 159 (354)
.|++.|.+++++.++++.+
T Consensus 139 ~~~~~l~~~l~~~~l~i~~ 157 (174)
T d1zxoa2 139 CYKEILQDAARQTGIQIGK 157 (174)
T ss_dssp HTHHHHHHHTTTTTCCEEE
T ss_pred HHHHHHHHHHHHcCCeecC
Confidence 4789999999998887643
No 7
>d1v54m_ f.23.7.1 (M:) Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) {Cow (Bos taurus) [TaxId: 9913]}
Probab=19.57 E-value=31 Score=22.98 Aligned_cols=14 Identities=21% Similarity=0.586 Sum_probs=11.1
Q ss_pred HHHHhHhHHHHHHH
Q 018537 302 NMVALLGPVLWGTF 315 (354)
Q Consensus 302 s~~~llGPilW~wf 315 (354)
-..+|+||.+|+.-
T Consensus 22 ~f~~~L~PaGwVLs 35 (43)
T d1v54m_ 22 TFLSFLLPAGWVLY 35 (43)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHccHHHHHH
Confidence 45689999999854
No 8
>d1x3zb1 a.189.1.1 (B:253-309) Rad23 STI1 domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=18.54 E-value=15 Score=25.59 Aligned_cols=47 Identities=28% Similarity=0.444 Sum_probs=33.7
Q ss_pred ChHHHHHHHHHhcC-CCCCCcchhhhcccCCcchhHHhhhhhHHHHHHHHH
Q 018537 71 TDSELYELERILFG-PSYFSPLLKSFTKRADVDYVMIEQDLEEREDFIASL 120 (354)
Q Consensus 71 TdeEL~~L~~ILf~-~s~fsPLlkSi~~r~~~Dy~~~~~~~~~R~~~i~~I 120 (354)
|-|||-+|-+..-| +.-.-||++|++.|++.-..++ .++-+.|++.+
T Consensus 6 t~edl~~lr~vvsg~peal~plle~ls~ryp~lre~i---m~npe~fisml 53 (57)
T d1x3zb1 6 TVEDLLSLRQVVSGNPEALAPLLENISARYPQLREHI---MANPEVFVSML 53 (57)
T ss_dssp CTTHHHHHHHHHHHCGGGHHHHHHHHHTTCHHHHHHH---HTCHHHHHHHH
T ss_pred cHHHHHHHHHHhcCChHHHHHHHHHHHHhhHHHHHHH---HhCHHHHHHHH
Confidence 56788888888887 6668899999999884433333 55666677654
No 9
>d1or7a2 a.177.1.1 (A:-1-111) SigmaE factor (RpoE) {Escherichia coli [TaxId: 562]}
Probab=18.41 E-value=56 Score=23.33 Aligned_cols=32 Identities=19% Similarity=0.422 Sum_probs=25.7
Q ss_pred HHHHHHHHHhhcCcCCCCCCChHHHHHHHHHHHHhh
Q 018537 142 YRNVLLAVRKNLNIPCSSKLSTEDLEAEIFLHLLQE 177 (354)
Q Consensus 142 YReVLldVckkLkV~~s~~lsT~dLEaeIflhLL~~ 177 (354)
|..-|..+|.++ ++ .. ..+|+=+|.|+++.++
T Consensus 31 y~~~l~~~~~~~-~~--~~-daeDl~Qe~~l~~~~~ 62 (113)
T d1or7a2 31 YQHKVASLVSRY-VP--SG-DVPDVVQEAFIKAYRA 62 (113)
T ss_dssp HHHHHHHHHTTT-SC--GG-GHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-cC--Cc-hHHHHHHHHHHHHHHh
Confidence 777888888776 32 33 4899999999999988
No 10
>d2f96a1 c.55.3.5 (A:19-220) Ribonuclease T {Pseudomonas aeruginosa [TaxId: 287]}
Probab=17.63 E-value=32 Score=25.84 Aligned_cols=32 Identities=13% Similarity=0.201 Sum_probs=23.5
Q ss_pred HHHHHhhcCcCCCC---CCChH--HHHHHHHHHHHhh
Q 018537 146 LLAVRKNLNIPCSS---KLSTE--DLEAEIFLHLLQE 177 (354)
Q Consensus 146 LldVckkLkV~~s~---~lsT~--dLEaeIflhLL~~ 177 (354)
|-.+|++++|.++. +-... ..-++||.+++++
T Consensus 158 L~~~~~~~gi~~~~~~aH~Al~Da~~ta~i~~~l~~~ 194 (202)
T d2f96a1 158 LAKACQAAGMEFDNREAHSARYDTEKTAELFCGIVNR 194 (202)
T ss_dssp HHHHHHHTTCCCCTTSCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence 56689999998755 33344 4557899999988
Done!