Your job contains 1 sequence.
>018539
MATAARLRYHLMASSSAPNTQIPNFTRQSPNFPYRLPNNPASFSQNHSLSILHSKVSPPR
FELSSTGGGGSYGTGHGKGGGGGGGDGSGGFSGDGDNSNSKDAGIWGLWLNGWRSRVAAD
PQFPFKVLMEQLVGVTACVIGDMASRPNFGLNELDFVFSTLVVGSIMNFTLMYLLAPTLS
AAPQNLPGLFASCPTSHMFEPGAFSFANRLGTFVFKGLVFASVGFAAGLVGTAISNGLIK
LRKKMDPAFETPNKPPPTVLNALTWSLHMGISSNFRYQTLNGIEFLLAKSTPEVVFKSSV
VVLRCLNNVLGGMSFVLLARMTGSQSVSADKAVAAAETGSAEEKQKLVDHNDEN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 018539
(354 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2077838 - symbol:AT3G08640 "AT3G08640" species... 928 7.7e-97 2
TAIR|locus:2077828 - symbol:AT3G08630 "AT3G08630" species... 902 1.6e-94 2
TAIR|locus:2065649 - symbol:LCD1 "AT2G37860" species:3702... 300 1.2e-26 1
TAIR|locus:2158155 - symbol:RER1 "AT5G22790" species:3702... 291 1.2e-25 1
TAIR|locus:505006615 - symbol:AT5G12470 "AT5G12470" speci... 253 1.5e-21 1
TAIR|locus:2078446 - symbol:AT3G56140 "AT3G56140" species... 190 4.4e-12 1
TAIR|locus:2063136 - symbol:AT2G40400 species:3702 "Arabi... 190 8.6e-12 2
TAIR|locus:2176826 - symbol:AT5G24690 "AT5G24690" species... 149 1.3e-07 1
>TAIR|locus:2077838 [details] [associations]
symbol:AT3G08640 "AT3G08640" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0009536 "plastid" evidence=IDA] EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009941 EMBL:AC012562
InterPro:IPR021825 Pfam:PF11891 EMBL:AY081327 EMBL:AY128826
IPI:IPI00535020 RefSeq:NP_187476.1 UniGene:At.19866 PaxDb:Q9C9Z2
PRIDE:Q9C9Z2 EnsemblPlants:AT3G08640.1 GeneID:820011
KEGG:ath:AT3G08640 TAIR:At3g08640 eggNOG:NOG326812
HOGENOM:HOG000029112 InParanoid:Q9C9Z2 OMA:CANNVAG PhylomeDB:Q9C9Z2
ProtClustDB:CLSN2684953 ArrayExpress:Q9C9Z2 Genevestigator:Q9C9Z2
Uniprot:Q9C9Z2
Length = 337
Score = 928 (331.7 bits), Expect = 7.7e-97, Sum P(2) = 7.7e-97
Identities = 175/233 (75%), Positives = 203/233 (87%)
Query: 107 GLWLNGWRSRVAADPQFPFKVLMEQLVGVTACVIGDMASRPNFGLNELDFVFSTLVVGSI 166
GL++ GWRSRVAADPQFPFKVLME++VG++ACV+GDMASRPNFGLNELDFVFSTLVVGSI
Sbjct: 102 GLFIQGWRSRVAADPQFPFKVLMEEIVGLSACVLGDMASRPNFGLNELDFVFSTLVVGSI 161
Query: 167 MNFTLMYLLAPTLSA--APQNLPGLFASCPTSHMFEPGAFSFANRLGTFVFKGLVFASVG 224
+NF LMY+LAPT + + Q LPG+F +CP+SHMFE G+F+ NR GT V+KG+VFASVG
Sbjct: 162 LNFVLMYMLAPTAATLGSSQTLPGIFRNCPSSHMFEQGSFTVMNRFGTLVYKGMVFASVG 221
Query: 225 FAAGLVGTAISNGLIKLRKKMDPAFETPNKPPPTVLNALTWSLHMGISSNFRYQTLNGIE 284
AAGLVGTAISNGLI LRKKMDP+FETPNKPPPTVLN+LTW+ HMG+S+N RYQTLNGIE
Sbjct: 222 LAAGLVGTAISNGLIMLRKKMDPSFETPNKPPPTVLNSLTWATHMGVSANARYQTLNGIE 281
Query: 285 FLLAKSTPEVVFKSSVVVLRCLNNVLGGMSFVLLARMTGSQSVSADKAVAAAE 337
FLLAK P +VFK+SV+VLRC NNV GGMSFVLLARMTGSQSV ++ E
Sbjct: 282 FLLAKVLPPLVFKTSVIVLRCANNVAGGMSFVLLARMTGSQSVEEKTEISEKE 334
Score = 54 (24.1 bits), Expect = 7.7e-97, Sum P(2) = 7.7e-97
Identities = 19/58 (32%), Positives = 27/58 (46%)
Query: 2 ATAARLRYHLMASSSAPNTQIPNFTRQSPNFPYRLPNNPASFSQNHSLSILHSKVSPP 59
A AA+L+ L A S + ++P S R P SF +N S+ LH+ S P
Sbjct: 3 AMAAKLQ--LSAKSDQSSVRLPRVINLS-----RDPTTRVSFPRNGSVCSLHTNFSSP 53
>TAIR|locus:2077828 [details] [associations]
symbol:AT3G08630 "AT3G08630" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0009536 "plastid" evidence=IDA] GO:GO:0009536
EMBL:CP002686 EMBL:AC012562 InterPro:IPR021825 Pfam:PF11891
ProtClustDB:CLSN2684953 EMBL:BT012218 EMBL:BT012416 IPI:IPI00533657
RefSeq:NP_187475.1 UniGene:At.17599 PRIDE:Q9C9Z3
EnsemblPlants:AT3G08630.1 GeneID:820010 KEGG:ath:AT3G08630
TAIR:At3g08630 InParanoid:Q9C9Z3 OMA:IEMSEIS PhylomeDB:Q9C9Z3
Genevestigator:Q9C9Z3 Uniprot:Q9C9Z3
Length = 339
Score = 902 (322.6 bits), Expect = 1.6e-94, Sum P(2) = 1.6e-94
Identities = 176/241 (73%), Positives = 205/241 (85%)
Query: 107 GLWLNGWRSRVAADPQFPFKVLMEQLVGVTACVIGDMASRPNFGLNELDFVFSTLVVGSI 166
GL++ GWRSRVAAD QFPFKVLME LVGV+A V+GDMASRPNFGLNELDFVFSTLVVGSI
Sbjct: 99 GLFIQGWRSRVAADSQFPFKVLMEMLVGVSANVLGDMASRPNFGLNELDFVFSTLVVGSI 158
Query: 167 MNFTLMYLLAPT-LSAAPQNL-PGLFASCPTSHMFEPGAFSFANRLGTFVFKGLVFASVG 224
+NFTLMYLLAP+ +S NL PG+F SCP+SHMFE G F+ NR GT V+KG+VFA+VG
Sbjct: 159 LNFTLMYLLAPSAISHGSSNLLPGIFRSCPSSHMFEQGNFTLMNRFGTLVYKGMVFATVG 218
Query: 225 FAAGLVGTAISNGLIKLRKKMDPAFETPNKPPPTVLNALTWSLHMGISSNFRYQTLNGIE 284
AAGLVGTAISNGLI LRKK+DP+FETPNKPPPT+LN+LTW+ HMG+S+N RYQTLNG E
Sbjct: 219 LAAGLVGTAISNGLIMLRKKIDPSFETPNKPPPTLLNSLTWATHMGVSANVRYQTLNGAE 278
Query: 285 FLLAKSTPEVVFKSSVVVLRCLNNVLGGMSFVLLARMTGSQSVSADKAVAAAETGSAEEK 344
FLL KS P +VFK+SV+ LR +NNVLGGMSFV LARMTGSQSV +K + +E S +EK
Sbjct: 279 FLLEKSLPPLVFKTSVIALRVVNNVLGGMSFVTLARMTGSQSVEEEKKIEMSEI-SEKEK 337
Query: 345 Q 345
+
Sbjct: 338 E 338
Score = 58 (25.5 bits), Expect = 1.6e-94, Sum P(2) = 1.6e-94
Identities = 19/58 (32%), Positives = 26/58 (44%)
Query: 2 ATAARLRYHLMASSSAPNTQIPNFTRQSPNFPYRLPNNPASFSQNHSLSILHSKVSPP 59
A AA+L H+ S N ++P S R P F +N S+S LH+ S P
Sbjct: 3 AMAAKL--HISTKSDQSNVRLPRLINLS-----RDPTARVLFPRNGSVSSLHTNFSSP 53
>TAIR|locus:2065649 [details] [associations]
symbol:LCD1 "AT2G37860" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0048366
"leaf development" evidence=IMP] [GO:0016020 "membrane"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009536 "plastid"
evidence=IDA] EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
GO:GO:0009941 GO:GO:0048366 EMBL:AK316808 IPI:IPI00518318
RefSeq:NP_001031506.1 UniGene:At.14627 PaxDb:B9DFK5 PRIDE:B9DFK5
EnsemblPlants:AT2G37860.3 GeneID:818362 KEGG:ath:AT2G37860
TAIR:At2g37860 eggNOG:NOG239107 HOGENOM:HOG000242221 OMA:IKSAALW
PhylomeDB:B9DFK5 ProtClustDB:CLSN2680100 Genevestigator:B9DFK5
InterPro:IPR021825 Pfam:PF11891 Uniprot:B9DFK5
Length = 432
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 80/240 (33%), Positives = 130/240 (54%)
Query: 107 GLWLNGW---RSRVAADPQFPFKVLMEQLVGVTACVIGDMASRPNFGLNELDFVFSTLVV 163
G + W R+R+ ADP F FK+ E ++ + ++ R E + + L+V
Sbjct: 197 GFAIRSWAMLRNRMLADPSFLFKIGAEIVIDSCCATVAEVQKRGKDFWAEFELYVADLLV 256
Query: 164 GSIMNFTLMYLLAPTLS-AAPQNLPG-----LFA--SCPTSHMFE---PGA-FSFANRLG 211
G+++N L+ +LAP + P PG +FA + P+S +FE PG FS RL
Sbjct: 257 GTVVNIALVGMLAPYVRFGQPSASPGFLGRMVFAYNALPSS-VFEAERPGCRFSAQQRLA 315
Query: 212 TFVFKGLVFASVGFAAGLVGTAISNGLIKLRKKMDPAFETPNKP-PPTVLNALTWSLHMG 270
T+ +KG+++ +VGF G+VG I+N ++ ++ ++ + E N P PP + +A W + +
Sbjct: 316 TYFYKGIMYGAVGFGCGIVGQGIANLIMTAKRNINKSEE--NIPVPPLIKSAALWGVFLS 373
Query: 271 ISSNFRYQTLNGIEFLL-----AKSTPEVVFKSSVVVLRCLNNVLGGMSFVLLARMTGSQ 325
+SSN RYQ +NG+E ++ AK P +V V R NN+ GGM FV AR++G Q
Sbjct: 374 VSSNTRYQIINGLERVVEASPFAKKFPPAAMAFTVGV-RLANNIYGGMQFVDWARLSGCQ 432
>TAIR|locus:2158155 [details] [associations]
symbol:RER1 "AT5G22790" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009706 "chloroplast inner
membrane" evidence=IDA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0009536
"plastid" evidence=IDA] GO:GO:0005739 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009706 EMBL:AB025618
eggNOG:NOG239107 InterPro:IPR021825 Pfam:PF11891 EMBL:AF367348
EMBL:AY081723 IPI:IPI00548224 RefSeq:NP_197671.1 UniGene:At.28733
PaxDb:Q9FGP9 PRIDE:Q9FGP9 EnsemblPlants:AT5G22790.1 GeneID:832342
KEGG:ath:AT5G22790 TAIR:At5g22790 HOGENOM:HOG000152462
InParanoid:Q9FGP9 OMA:PYARIGK PhylomeDB:Q9FGP9
ProtClustDB:CLSN2916941 Genevestigator:Q9FGP9 Uniprot:Q9FGP9
Length = 433
Score = 291 (107.5 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 83/229 (36%), Positives = 120/229 (52%)
Query: 114 RSRVAADPQFPFKVLMEQLVGVTACVIGDMASRPNFGLNELDFVFSTLVVGSIMNFTLMY 173
R+R+ ADP F FKV E + ++ R +E + + L+VG +++ L+
Sbjct: 207 RNRMLADPSFLFKVGTEVAIDSCCATFAEVQKRGEDFWSEFELYAADLLVGLVVDVALVG 266
Query: 174 LLAPTLSAAPQNLP--GLF-------ASCPTSHMFE---PGA-FSFANRLGTFVFKGLVF 220
LLAP ++ GLF AS P+S +FE PG FS R+ TF +KGL++
Sbjct: 267 LLAPYARIGKPSVASTGLFKDLKRACASLPSS-VFEAERPGCKFSVNQRIATFFYKGLLY 325
Query: 221 ASVGFAAGLVGTAISNGLIKLRKKMDPAFETPNKPPPTVLNALTWSLHMGISSNFRYQTL 280
SVGF GL+G I+N LI K+ E PP +A W + +G+SSN RYQ +
Sbjct: 326 GSVGFGCGLIGQGIAN-LIMTAKRSVKKSEEDVPIPPLFESAALWGVFLGLSSNARYQII 384
Query: 281 NGIEFLLAKSTPE----VVFKSSVVVLRCLNNVLGGMSFVLLARMTGSQ 325
NG+E ++ ST VV + V +R NNV GGM FV A+++G Q
Sbjct: 385 NGLERVVEGSTAAKRIPVVAMAFTVGVRFANNVYGGMQFVDWAKLSGVQ 433
>TAIR|locus:505006615 [details] [associations]
symbol:AT5G12470 "AT5G12470" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009706 "chloroplast inner membrane"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0009536 "plastid"
evidence=IDA] GO:GO:0005739 EMBL:CP002688 GO:GO:0009706
EMBL:AL592312 InterPro:IPR021825 Pfam:PF11891 EMBL:AY091130
EMBL:AY114001 EMBL:BT002454 EMBL:BT008470 EMBL:AK176209
IPI:IPI00525191 RefSeq:NP_568280.1 UniGene:At.23837 PRIDE:Q94CJ5
EnsemblPlants:AT5G12470.1 GeneID:831122 KEGG:ath:AT5G12470
TAIR:At5g12470 InParanoid:Q94CJ5 OMA:MAIASCF PhylomeDB:Q94CJ5
ProtClustDB:CLSN2917616 Genevestigator:Q94CJ5 Uniprot:Q94CJ5
Length = 386
Score = 253 (94.1 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 74/235 (31%), Positives = 115/235 (48%)
Query: 106 WGLWLNGWRSRVAADPQFPFKVLMEQLVGVTACVIGDMASR-PNFGLNELDFVFSTLVVG 164
W + G+R R+ AD F K+ ME VG+ + R NF NEL+ VF+ + +
Sbjct: 151 WLMQFGGFRERLLADDLFMAKLAMECGVGIFTKTAAEYERRRENF-FNELEVVFADVAMA 209
Query: 165 SIMNFTLMYLLAPTLSAAPQ------NLPGLFASCPTSHMFEPG----AFSFANRLGTFV 214
I +F L+YL APT+S P + F +CP + F+ +++ RLG
Sbjct: 210 IIADFMLVYLPAPTVSLRPPLALTAGGISKFFHNCP-DNAFQVALSGTSYTLLQRLGAIT 268
Query: 215 FKGLVFASVGFAAGLVGTAISNGLIKLRKKMDPAFETPNKPPPTVLNALTWSLHMGISSN 274
G +VG + LVGTAI+N IK RK +D E + P V ++ + ++M +SSN
Sbjct: 269 RNGAKLFAVGTTSSLVGTAITNAFIKARKAVDQNSEGEVETVPIVSTSVAYGVYMAVSSN 328
Query: 275 FRYQTLNGI--EFLLAKSTPE--VVFKSSVVVLRCLNNVLGGMSFVLLARMTGSQ 325
RYQ + G+ + LL + + + +R N LG + +V AR+ G Q
Sbjct: 329 LRYQIVAGVIEQRLLEPMLHQHKLALSALCFAVRTGNTFLGSLLWVDYARLIGIQ 383
>TAIR|locus:2078446 [details] [associations]
symbol:AT3G56140 "AT3G56140" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009543 "chloroplast thylakoid lumen"
evidence=ISS] GO:GO:0009507 EMBL:CP002686 InterPro:IPR021825
Pfam:PF11891 EMBL:AY093111 EMBL:BT010340 EMBL:AK227110
IPI:IPI00520041 RefSeq:NP_191173.2 UniGene:At.34962
ProteinModelPortal:Q8RWG3 STRING:Q8RWG3 PaxDb:Q8RWG3 PRIDE:Q8RWG3
EnsemblPlants:AT3G56140.1 GeneID:824780 KEGG:ath:AT3G56140
TAIR:At3g56140 eggNOG:NOG242091 HOGENOM:HOG000082965
InParanoid:Q8RWG3 OMA:RRKENFF PhylomeDB:Q8RWG3
ProtClustDB:CLSN2688835 ArrayExpress:Q8RWG3 Genevestigator:Q8RWG3
InterPro:IPR007314 Pfam:PF04187 Uniprot:Q8RWG3
Length = 745
Score = 190 (71.9 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 54/188 (28%), Positives = 89/188 (47%)
Query: 112 GWRSRVAADPQFPFKVLMEQLVGVTACVIGDMASRPNFGLNELDFVFSTLVVGSIMNFTL 171
G+R R+ ADP+F ++ +E+ + +T +I R E+D+V + V GS+++F
Sbjct: 476 GFRERLLADPKFLNRLAIEEAISITTTLIAQYEKRKENFFEEIDYVITDTVRGSVVDFFT 535
Query: 172 MYLLAPTLS--------AAPQN---LPGLFASCPTSHMFEPGA---FSFANRLGTFVFKG 217
++L APTLS P + L GL S P + + A ++ R+ + + G
Sbjct: 536 VWLPAPTLSFLSYADETTGPDSIDALRGLLGSIPDNAFQKSLAGREWNLNLRIASVIVGG 595
Query: 218 LVFASVGFAAGLVGTAISNGLIKLRKKMDPAFETPNKPP--PTVLNALTWSLHMGISSNF 275
L A VG + SN L RK + P KP P + A+ + +G S+N
Sbjct: 596 LKLAGVGVVSSFAAVGASNALNIARKVIKPELVVAEKPKRSPLLKTAMVYGGFLGTSANL 655
Query: 276 RYQTLNGI 283
RYQ + G+
Sbjct: 656 RYQIIAGL 663
Score = 147 (56.8 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 59/195 (30%), Positives = 88/195 (45%)
Query: 154 LDFVFSTLVVGSIMNFTLMYLLAPTLSAAPQNLPGLFASCPTSHMFEPGA---FSFANRL 210
+DF F+ + ++F L Y T + L GL S P + + A ++ R+
Sbjct: 531 VDF-FTVWLPAPTLSF-LSYADETTGPDSIDALRGLLGSIPDNAFQKSLAGREWNLNLRI 588
Query: 211 GTFVFKGLVFASVGFAAGLVGTAISNGLIKLRKKMDPAFETPNKPP--PTVLNALTWSLH 268
+ + GL A VG + SN L RK + P KP P + A+ +
Sbjct: 589 ASVIVGGLKLAGVGVVSSFAAVGASNALNIARKVIKPELVVAEKPKRSPLLKTAMVYGGF 648
Query: 269 MGISSNFRYQTLNG-IEFLLA---KSTPEVVFKSSVVVLRCLNNVLGGMSFVLLARMTGS 324
+G S+N RYQ + G IE L+ S P +V S VV R LN+ G ++ LAR TG
Sbjct: 649 LGTSANLRYQIIAGLIEHRLSDELSSQPLLVNAISFVV-RTLNSYFGTQQWIDLARSTGL 707
Query: 325 Q---SVSADKAVAAA 336
Q S+ A K ++ A
Sbjct: 708 QTQKSIPASKEISEA 722
>TAIR|locus:2063136 [details] [associations]
symbol:AT2G40400 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM] [GO:0009543 "chloroplast
thylakoid lumen" evidence=ISS] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] EMBL:CP002685 EMBL:AC007020
InterPro:IPR021825 Pfam:PF11891 ProtClustDB:CLSN2688835
InterPro:IPR007314 Pfam:PF04187 EMBL:AF410285 EMBL:AY102131
IPI:IPI00518341 PIR:A84829 RefSeq:NP_565930.1 RefSeq:NP_850329.1
UniGene:At.14284 ProteinModelPortal:Q9SIY5 STRING:Q9SIY5
PRIDE:Q9SIY5 EnsemblPlants:AT2G40400.1 EnsemblPlants:AT2G40400.2
GeneID:818633 KEGG:ath:AT2G40400 TAIR:At2g40400 InParanoid:Q9SIY5
OMA:IEHRISD PhylomeDB:Q9SIY5 ArrayExpress:Q9SIY5
Genevestigator:Q9SIY5 Uniprot:Q9SIY5
Length = 735
Score = 190 (71.9 bits), Expect = 8.6e-12, Sum P(2) = 8.6e-12
Identities = 54/189 (28%), Positives = 90/189 (47%)
Query: 112 GWRSRVAADPQFPFKVLMEQLVGVTACVIGDMASRPNFGLNELDFVFSTLVVGSIMNFTL 171
G+R R+ ADP+F ++ +E+ + +T ++ R ELD+V + V S+++F
Sbjct: 467 GFRERLLADPKFLNRLAIEEAISITTTLVAQYEKRKENFFEELDYVITDSVRASVVDFFT 526
Query: 172 MYLLAPTLS--------AAPQN---LPGLFASCPTSHMFEPGA----FSFANRLGTFVFK 216
++L APTLS P + L GL S P + F+ ++ + R+ + +
Sbjct: 527 VWLPAPTLSFISYADETIGPNSIDALRGLLGSIP-DNAFQKSLGGQEWTLSLRIASVIIG 585
Query: 217 GLVFASVGFAAGLVGTAISNGLIKLRKKMDPAFETPN--KPPPTVLNALTWSLHMGISSN 274
GL A VG + SN L +RK + P K P + AL + ++G SSN
Sbjct: 586 GLKLAGVGVVSSFAAVGSSNALYAIRKFIKPELGVGEQAKRSPMLKTALVYGGYLGTSSN 645
Query: 275 FRYQTLNGI 283
RYQ + G+
Sbjct: 646 IRYQIIAGL 654
Score = 138 (53.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 51/176 (28%), Positives = 79/176 (44%)
Query: 186 LPGLFASCPTSHMFEPGA----FSFANRLGTFVFKGLVFASVGFAAGLVGTAISNGLIKL 241
L GL S P + F+ ++ + R+ + + GL A VG + SN L +
Sbjct: 552 LRGLLGSIP-DNAFQKSLGGQEWTLSLRIASVIIGGLKLAGVGVVSSFAAVGSSNALYAI 610
Query: 242 RKKMDPAFETPN--KPPPTVLNALTWSLHMGISSNFRYQTLNG-IEFLLA---KSTPEVV 295
RK + P K P + AL + ++G SSN RYQ + G IE ++ S P +V
Sbjct: 611 RKFIKPELGVGEQAKRSPMLKTALVYGGYLGTSSNIRYQIIAGLIEHRISDELSSQPLLV 670
Query: 296 FKSSVVVLRCLNNVLGGMSFVLLARMTGSQSVSADKAVAAAETGSAEEKQKLVDHN 351
S VV R N+ G ++ LAR TG Q+ K+V + Q V+++
Sbjct: 671 NMISFVV-RVANSYFGTQQWIDLARSTGLQT---QKSVTTSNQIPEVASQSTVEYS 722
Score = 37 (18.1 bits), Expect = 8.6e-12, Sum P(2) = 8.6e-12
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 11 LMASSSAPNTQIPNFTRQSP 30
L+AS S+ + P F Q P
Sbjct: 9 LLASQSSSSFSFPRFRGQLP 28
>TAIR|locus:2176826 [details] [associations]
symbol:AT5G24690 "AT5G24690" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0009706 "chloroplast inner
membrane" evidence=IDA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0009536
"plastid" evidence=IDA] GO:GO:0005739 EMBL:CP002688 GO:GO:0009706
InterPro:IPR021825 Pfam:PF11891 EMBL:AF370204 EMBL:AY056434
EMBL:AY133867 EMBL:AK229775 EMBL:AK229818 EMBL:AK229879
EMBL:AK229887 EMBL:AK229942 EMBL:AK229959 EMBL:AK230063
EMBL:AK230067 EMBL:AK230098 EMBL:AK230099 EMBL:AK230309
EMBL:AK230320 EMBL:AK230414 IPI:IPI00531220 RefSeq:NP_197857.2
UniGene:At.49058 UniGene:At.71083 UniGene:At.75041 STRING:Q93W02
PRIDE:Q93W02 EnsemblPlants:AT5G24690.1 GeneID:832541
KEGG:ath:AT5G24690 TAIR:At5g24690 InParanoid:Q93W02 OMA:LRQAYEM
PhylomeDB:Q93W02 ProtClustDB:CLSN2690197 ArrayExpress:Q93W02
Genevestigator:Q93W02 Uniprot:Q93W02
Length = 521
Score = 149 (57.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 64/236 (27%), Positives = 99/236 (41%)
Query: 116 RVAADPQFPFKVLMEQLVGVTACVIGDMASRPNFGLNELDFVFSTLVVGSIMNFTLMYLL 175
R+ ADP F +K+L+EQ V V ++ +R N E D ++ S N ++LL
Sbjct: 240 RMLADPAFLYKLLLEQAATVGCSVWWEVKNRKNRLKEEWDLALINVLTVSACNAAAVWLL 299
Query: 176 APTLSAAPQ---NLPGLFASCPTSHMFEPG----AFSFANRLGTFVFKGLVFASVGFAAG 228
AP S +L P +++FE F R + +K + +G AAG
Sbjct: 300 APCRSYGNTFRFDLQNTLQKLP-NNLFEMSYPLREFDLQKRFHSLFYKAAELSILGLAAG 358
Query: 229 LVGTAISNGLIKLRKKMDPAFETPNKPPPTVLNALTWSLHMGISSNFRYQTLNGIEFLLA 288
+ ++SN L KK + T P NAL + +GI +N RYQ L G E ++
Sbjct: 359 TLQGSLSNVLAG--KKKNRVSVTV---PSISTNALGYGAFLGIYANLRYQLLCGFERGVS 413
Query: 289 KSTPEV-VFKSSVVVLRCLNNVLGGMSFVLLARMTGSQSVSADKAVAAAETGSAEE 343
+ V LR +N LG S + + +D +A A +EE
Sbjct: 414 SHFDVIGVALFFGTALRIMNVQLGEKSRQVWLGVEADPLAQSDDLLAKAYNRPSEE 469
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.133 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 354 313 0.00081 116 3 11 22 0.37 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 8
No. of states in DFA: 607 (65 KB)
Total size of DFA: 204 KB (2114 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.81u 0.10s 23.91t Elapsed: 00:00:01
Total cpu time: 23.81u 0.10s 23.91t Elapsed: 00:00:01
Start: Mon May 20 17:57:20 2013 End: Mon May 20 17:57:21 2013