BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>018541
MGICASWLRMLVLLYMDLNPFPIFGTQELRIQTCPVVFVALSGGTKACMHKAFQIIQATC
EGQLNVDESRLIRSCVAGQIYDSSPVDFTSDFCARFGLHPTIQKIPGLSKLVSWVAKGVT
SGLDGLCLTRFEPQRAEYWRALYNSVDLGTPFLIICSDNDELAPQQVIYNFARHLLALGG
DVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKAASVYSQRIRQLGEISGMEGTHDEISE
LICDLQNVAVNSNQSLRRVAVEPSDHFFLPSSTELHSQESGSLQDERNSRSVYLPTPSIS
AHSVLGEFLFDVCVPKNVEGWDIRFSGSVNGQPYASARRHSPFNKFRCNLRSRL

High Scoring Gene Products

Symbol, full name Information P value
AT2G15695 protein from Arabidopsis thaliana 4.1e-104
AT5G44250 protein from Arabidopsis thaliana 1.7e-73

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  018541
        (354 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:505006247 - symbol:AT2G15695 "AT2G15695" speci...  1031  4.1e-104  1
TAIR|locus:2167613 - symbol:AT5G44250 "AT5G44250" species...   742  1.7e-73   1


>TAIR|locus:505006247 [details] [associations]
            symbol:AT2G15695 "AT2G15695" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC006248
            InterPro:IPR008547 PANTHER:PTHR12265 Pfam:PF05705 EMBL:BT015942
            EMBL:BT020436 EMBL:AK226576 IPI:IPI00524620 RefSeq:NP_565378.1
            UniGene:At.26736 UniGene:At.74258 ProteinModelPortal:Q8S8H8
            SMR:Q8S8H8 STRING:Q8S8H8 EnsemblPlants:AT2G15695.1 GeneID:816063
            KEGG:ath:AT2G15695 TAIR:At2g15695 eggNOG:NOG283205
            HOGENOM:HOG000239704 InParanoid:Q8S8H8 OMA:TRFESQR PhylomeDB:Q8S8H8
            ProtClustDB:CLSN2917128 ArrayExpress:Q8S8H8 Genevestigator:Q8S8H8
            Uniprot:Q8S8H8
        Length = 420

 Score = 1031 (368.0 bits), Expect = 4.1e-104, P = 4.1e-104
 Identities = 201/336 (59%), Positives = 254/336 (75%)

Query:    27 QELRIQTCPVVFVALSGGTKACMHKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPV 86
             +EL+ + CPV+F+A SG  KACM+K  Q+I   CE Q++ D+S+L+R+C++G +YDS P+
Sbjct:    88 EELKSRPCPVIFLAFSGAPKACMYKVLQVIMDDCEAQIHPDDSQLVRTCLSGHVYDSGPL 147

Query:    87 DFTSDFCARFGLHPTIQKIPGLSKLVSWVAKGVTSGLDGLCLTRFEPQRAEYWRALYNSV 146
             DFTSD   +F LHPTI+++ G S+LVSWVAKG++SGLDGL LTRFE QR+EYW+ALY+SV
Sbjct:   148 DFTSDLNVKFALHPTIRRMSGPSRLVSWVAKGISSGLDGLYLTRFESQRSEYWQALYSSV 207

Query:   147 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAA 206
             ++G P+LI+CS+NDELAP QVI +F   L  LGG+VK+VK   SPH GHY + PIQYRA 
Sbjct:   208 EIGAPYLILCSENDELAPLQVISSFTHQLQELGGEVKVVKWKNSPHAGHYAHNPIQYRAV 267

Query:   207 ITGLLEKAASVYSQRIRQLGEISGMEGTHDEISELICDLQNVAVNSNQSLRRVAVEPSDH 266
             I+  LEKA SV+  +IRQLGE +    THDEISELICDLQ VAVNSNQSLRRVA  P DH
Sbjct:   268 ISNFLEKAISVHLHKIRQLGERAH---THDEISELICDLQKVAVNSNQSLRRVATGPCDH 324

Query:   267 FFLPSSTELHSQESGS----LQDERNSRSVYLPT-P-SISAHSVLGEFLFDVCVPKNVEG 320
             FFLPSS    S  + S     Q+E+  RS + P  P SI+AHSVLG+FLFD CVPKN+EG
Sbjct:   325 FFLPSSAPYQSNSNNSDPSSSQEEQRERSSFRPLQPTSINAHSVLGQFLFDSCVPKNIEG 384

Query:   321 WDIRFSGSVNGQPYA--SARRHSPFNKFRCNLRSRL 354
             WDIRF+G +NGQPYA  S+R++S     +   RSRL
Sbjct:   385 WDIRFAGCLNGQPYATSSSRKNSNLGFKKRFFRSRL 420


>TAIR|locus:2167613 [details] [associations]
            symbol:AT5G44250 "AT5G44250" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005777 "peroxisome" evidence=IDA] EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0005777 EMBL:AB005239
            InterPro:IPR008547 PANTHER:PTHR12265 Pfam:PF05705
            HOGENOM:HOG000239704 EMBL:AY054511 EMBL:AY086741 EMBL:BT008858
            IPI:IPI00521686 RefSeq:NP_199238.1 UniGene:At.20604
            ProteinModelPortal:Q9FFG7 SMR:Q9FFG7 PRIDE:Q9FFG7
            EnsemblPlants:AT5G44250.1 GeneID:834448 KEGG:ath:AT5G44250
            TAIR:At5g44250 InParanoid:Q9FFG7 OMA:NVEDWDI PhylomeDB:Q9FFG7
            ProtClustDB:CLSN2687234 Genevestigator:Q9FFG7 Uniprot:Q9FFG7
        Length = 403

 Score = 742 (266.3 bits), Expect = 1.7e-73, P = 1.7e-73
 Identities = 147/306 (48%), Positives = 197/306 (64%)

Query:    27 QELRIQTCPVVFVALSGGTKACMHKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPV 86
             +EL+ +  P+VF + SGG  ACM+K  QI++ TCE  LN D+ RL+R+C++G IYDS PV
Sbjct:    80 KELKAKPVPLVFASFSGGPNACMYKVLQILEGTCETGLNPDDCRLVRNCISGFIYDSCPV 139

Query:    87 DFTSDFCARFGLHPTIQKIPGLSKLVSWVAKGVTSGLDGLCLTRFEPQRAEYWRALYNSV 146
             DFTSD  AR  +HPT  K+    K   W A G+ S LD + L RFE QRAEYW+ LY+++
Sbjct:   140 DFTSDLGARLAVHPTTLKMSSPPKPFVWAANGIASSLDYVFLNRFESQRAEYWQTLYSTI 199

Query:   147 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAA 206
              +  P+LI+CS+ND+LAP Q I+NFA  L  LGG+VKLVK N SPH GHY Y  + Y+AA
Sbjct:   200 IMRVPYLILCSENDDLAPYQTIHNFATRLQELGGNVKLVKWNDSPHCGHYRYNQVDYKAA 259

Query:   207 ITGLLEKAASVYSQRIRQLGEISGMEGT-HDEISELICDLQNVAVNSNQSLRRVAVEPSD 265
             ++  L KAASVYSQ+ R L     M+GT HDEI+E I  L       N+S     +  +D
Sbjct:   260 VSEFLSKAASVYSQKTRSLDR-EAMKGTCHDEITEPIQSLGQSTSGLNRSFNGTPLVTTD 318

Query:   266 HFFLPSSTELH-SQESGSLQDERNSRSVYLPTP----SISAHSVLGEFLFDVCVPKNVEG 320
             HFF+PS+   +  ++ G +QDE     + L       S+  + VLG+ LFDV +PKNVE 
Sbjct:   319 HFFVPSTVGYYVGRDGGYVQDEHKQDLICLSNTQTNESVKPNGVLGQILFDVYIPKNVED 378

Query:   321 WDIRFS 326
             WDI+ S
Sbjct:   379 WDIKLS 384


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.137   0.420    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      354       354   0.00079  117 3  11 22  0.36    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  620 (66 KB)
  Total size of DFA:  253 KB (2136 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  28.21u 0.10s 28.31t   Elapsed:  00:00:01
  Total cpu time:  28.21u 0.10s 28.31t   Elapsed:  00:00:01
  Start:  Mon May 20 17:59:58 2013   End:  Mon May 20 17:59:59 2013

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