Query 018541
Match_columns 354
No_of_seqs 156 out of 308
Neff 5.3
Searched_HMMs 46136
Date Fri Mar 29 09:52:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018541.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018541hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF05705 DUF829: Eukaryotic pr 100.0 4.8E-36 1E-40 278.2 15.7 185 8-211 45-240 (240)
2 KOG2521 Uncharacterized conser 100.0 2E-33 4.4E-38 276.8 9.2 241 10-275 89-350 (350)
3 PF00326 Peptidase_S9: Prolyl 98.1 2.4E-05 5.1E-10 70.8 9.6 69 148-216 143-211 (213)
4 PRK11460 putative hydrolase; P 97.6 0.0022 4.8E-08 59.8 14.2 77 149-230 148-224 (232)
5 PF02230 Abhydrolase_2: Phosph 97.5 0.0011 2.5E-08 60.5 11.3 61 149-214 155-215 (216)
6 PRK11126 2-succinyl-6-hydroxy- 96.8 0.016 3.6E-07 52.3 11.5 55 148-213 187-241 (242)
7 TIGR01738 bioH putative pimelo 96.8 0.0026 5.7E-08 55.7 6.0 60 147-211 186-245 (245)
8 PF12697 Abhydrolase_6: Alpha/ 96.6 0.0094 2E-07 51.2 8.1 54 148-206 175-228 (228)
9 PRK14875 acetoin dehydrogenase 96.5 0.034 7.4E-07 53.7 11.9 59 147-213 312-370 (371)
10 TIGR02427 protocat_pcaD 3-oxoa 96.4 0.0076 1.6E-07 52.9 6.1 61 147-212 191-251 (251)
11 TIGR03611 RutD pyrimidine util 96.3 0.009 1.9E-07 53.2 6.2 61 147-212 196-256 (257)
12 PLN03087 BODYGUARD 1 domain co 96.3 0.0067 1.4E-07 63.3 6.1 63 148-214 417-479 (481)
13 PRK00175 metX homoserine O-ace 96.2 0.018 3.8E-07 57.5 8.4 68 147-215 307-375 (379)
14 PLN02652 hydrolase; alpha/beta 96.0 0.016 3.5E-07 58.7 7.0 68 147-216 322-389 (395)
15 PHA02857 monoglyceride lipase; 95.9 0.02 4.3E-07 53.3 6.8 65 147-214 207-273 (276)
16 PRK10749 lysophospholipase L2; 95.9 0.024 5.1E-07 55.2 7.5 67 147-213 257-328 (330)
17 TIGR02240 PHA_depoly_arom poly 95.9 0.019 4E-07 53.8 6.4 62 147-214 205-266 (276)
18 PLN02965 Probable pheophorbida 95.9 0.021 4.5E-07 52.9 6.7 61 148-213 192-252 (255)
19 PRK06765 homoserine O-acetyltr 95.9 0.027 5.9E-07 57.1 8.0 66 147-213 321-387 (389)
20 PRK10162 acetyl esterase; Prov 95.8 0.18 3.9E-06 49.2 13.0 44 150-195 249-292 (318)
21 PRK10566 esterase; Provisional 95.7 0.046 1E-06 50.0 8.2 61 149-214 186-248 (249)
22 COG1506 DAP2 Dipeptidyl aminop 95.7 0.038 8.3E-07 59.1 8.7 72 145-216 547-618 (620)
23 PRK05077 frsA fermentation/res 95.7 0.19 4.2E-06 51.2 13.2 61 147-215 353-413 (414)
24 COG1647 Esterase/lipase [Gener 95.6 0.082 1.8E-06 50.4 9.4 64 148-213 180-243 (243)
25 TIGR01392 homoserO_Ac_trn homo 95.6 0.038 8.3E-07 54.1 7.4 65 147-212 286-351 (351)
26 PLN02679 hydrolase, alpha/beta 95.6 0.045 9.8E-07 54.1 8.0 66 148-214 291-357 (360)
27 TIGR03056 bchO_mg_che_rel puta 95.6 0.03 6.5E-07 51.1 6.2 60 148-212 219-278 (278)
28 COG0400 Predicted esterase [Ge 95.4 0.12 2.6E-06 48.3 9.9 61 148-214 145-205 (207)
29 PLN02824 hydrolase, alpha/beta 95.4 0.039 8.5E-07 52.0 6.7 62 147-213 232-293 (294)
30 PF01738 DLH: Dienelactone hyd 95.4 0.066 1.4E-06 48.7 7.9 68 148-215 144-211 (218)
31 TIGR01250 pro_imino_pep_2 prol 95.3 0.049 1.1E-06 49.0 6.6 60 147-212 229-288 (288)
32 PRK03592 haloalkane dehalogena 95.3 0.05 1.1E-06 51.3 6.8 65 148-216 227-291 (295)
33 PRK07581 hypothetical protein; 95.2 0.058 1.2E-06 52.3 7.1 64 148-216 274-338 (339)
34 PRK08775 homoserine O-acetyltr 95.1 0.032 6.9E-07 54.5 5.0 65 147-215 275-340 (343)
35 PLN02298 hydrolase, alpha/beta 95.0 0.061 1.3E-06 51.8 6.7 65 147-214 249-317 (330)
36 TIGR03343 biphenyl_bphD 2-hydr 94.9 0.068 1.5E-06 49.4 6.5 61 147-212 221-281 (282)
37 PRK03204 haloalkane dehalogena 94.6 0.078 1.7E-06 50.4 6.2 58 149-211 227-285 (286)
38 TIGR02821 fghA_ester_D S-formy 94.6 0.32 6.9E-06 46.2 10.3 46 149-194 211-257 (275)
39 PRK10349 carboxylesterase BioH 94.5 0.078 1.7E-06 48.7 5.9 62 147-213 194-255 (256)
40 PRK06489 hypothetical protein; 94.5 0.085 1.8E-06 52.0 6.4 63 147-215 290-358 (360)
41 PLN02578 hydrolase 94.0 0.14 3.1E-06 50.3 6.9 60 147-212 294-353 (354)
42 PLN02511 hydrolase 94.0 0.081 1.7E-06 53.2 5.2 76 147-226 296-377 (388)
43 PLN02385 hydrolase; alpha/beta 94.0 0.13 2.9E-06 50.2 6.6 65 147-214 277-345 (349)
44 TIGR03695 menH_SHCHC 2-succiny 93.9 0.15 3.2E-06 44.4 6.1 60 147-212 192-251 (251)
45 PRK00870 haloalkane dehalogena 93.9 0.11 2.4E-06 49.3 5.7 64 147-213 237-300 (302)
46 TIGR01607 PST-A Plasmodium sub 93.7 0.2 4.3E-06 49.2 7.3 64 147-212 268-331 (332)
47 PLN03084 alpha/beta hydrolase 93.7 0.17 3.7E-06 51.2 6.9 60 147-212 323-382 (383)
48 KOG1552 Predicted alpha/beta h 93.7 0.25 5.3E-06 47.9 7.5 63 147-214 190-252 (258)
49 PRK10673 acyl-CoA esterase; Pr 93.3 0.23 5E-06 45.0 6.5 62 147-213 193-254 (255)
50 PLN02872 triacylglycerol lipas 93.1 0.24 5.2E-06 50.5 6.9 64 149-215 325-390 (395)
51 COG2267 PldB Lysophospholipase 93.0 0.26 5.6E-06 48.1 6.8 68 146-215 225-295 (298)
52 PF07859 Abhydrolase_3: alpha/ 93.0 0.14 3.1E-06 45.6 4.6 44 151-196 168-211 (211)
53 KOG1454 Predicted hydrolase/ac 92.7 0.34 7.4E-06 48.0 7.2 60 150-214 265-324 (326)
54 PF03583 LIP: Secretory lipase 92.6 0.41 8.9E-06 46.6 7.5 55 149-203 219-274 (290)
55 PLN02211 methyl indole-3-aceta 92.4 0.38 8.1E-06 45.8 6.8 59 149-213 211-269 (273)
56 PF00561 Abhydrolase_1: alpha/ 92.3 0.26 5.6E-06 43.2 5.3 57 147-208 173-229 (230)
57 PRK05855 short chain dehydroge 91.5 0.26 5.6E-06 50.5 4.9 62 148-215 232-293 (582)
58 PLN02442 S-formylglutathione h 91.1 1.2 2.5E-05 42.8 8.7 62 147-218 215-277 (283)
59 TIGR01836 PHA_synth_III_C poly 91.1 0.52 1.1E-05 46.2 6.4 64 147-213 284-349 (350)
60 COG0429 Predicted hydrolase of 91.0 3.1 6.7E-05 42.0 11.6 60 135-198 257-320 (345)
61 PF12695 Abhydrolase_5: Alpha/ 90.5 0.43 9.2E-06 39.4 4.5 42 149-193 104-145 (145)
62 PLN02894 hydrolase, alpha/beta 90.3 0.83 1.8E-05 46.2 7.2 65 148-217 324-388 (402)
63 COG0657 Aes Esterase/lipase [L 89.9 3.7 8E-05 39.5 11.0 42 150-193 246-287 (312)
64 TIGR03100 hydr1_PEP hydrolase, 89.6 0.72 1.6E-05 43.8 5.8 63 149-212 207-273 (274)
65 PLN02980 2-oxoglutarate decarb 88.7 1.1 2.3E-05 53.7 7.5 67 147-215 1566-1640(1655)
66 COG0596 MhpC Predicted hydrola 87.7 1.5 3.2E-05 37.3 5.9 60 148-211 220-279 (282)
67 COG1073 Hydrolases of the alph 87.1 1.7 3.7E-05 39.5 6.3 64 150-215 233-298 (299)
68 COG0412 Dienelactone hydrolase 87.0 1.4 2.9E-05 41.7 5.8 47 147-193 156-202 (236)
69 PRK11071 esterase YqiA; Provis 86.5 1.7 3.6E-05 39.4 5.9 55 148-212 135-189 (190)
70 KOG2382 Predicted alpha/beta h 86.1 4.3 9.3E-05 40.6 8.9 64 146-214 250-313 (315)
71 TIGR01840 esterase_phb esteras 85.8 3.3 7.2E-05 37.5 7.5 29 150-178 168-197 (212)
72 TIGR01249 pro_imino_pep_1 prol 85.3 1.6 3.5E-05 41.8 5.4 56 149-212 248-303 (306)
73 PRK13604 luxD acyl transferase 83.5 1.8 4E-05 43.0 5.0 91 148-252 201-292 (307)
74 PRK10985 putative hydrolase; P 83.0 2.2 4.9E-05 41.4 5.4 62 147-212 253-318 (324)
75 PRK05371 x-prolyl-dipeptidyl a 80.1 7.4 0.00016 43.2 8.7 70 147-217 453-522 (767)
76 KOG2551 Phospholipase/carboxyh 80.1 6.3 0.00014 37.7 7.0 71 140-218 154-224 (230)
77 TIGR01838 PHA_synth_I poly(R)- 78.7 3.8 8.2E-05 43.6 5.7 50 148-201 414-463 (532)
78 KOG1838 Alpha/beta hydrolase [ 78.3 31 0.00068 35.8 11.9 84 135-221 305-395 (409)
79 KOG3043 Predicted hydrolase re 76.2 5 0.00011 38.6 5.2 46 147-193 162-209 (242)
80 PF08386 Abhydrolase_4: TAP-li 75.8 7.3 0.00016 32.0 5.5 59 150-213 35-93 (103)
81 PRK10115 protease 2; Provision 75.1 8.8 0.00019 41.9 7.4 59 147-207 603-665 (686)
82 KOG2984 Predicted hydrolase [G 74.7 4.3 9.4E-05 38.8 4.3 63 147-214 214-276 (277)
83 PF08840 BAAT_C: BAAT / Acyl-C 74.5 5 0.00011 37.1 4.7 46 148-193 114-162 (213)
84 KOG4391 Predicted alpha/beta h 72.5 8.1 0.00018 37.4 5.6 66 147-216 219-284 (300)
85 PF05705 DUF829: Eukaryotic pr 71.3 0.94 2E-05 42.0 -0.9 157 151-321 67-240 (240)
86 COG3243 PhaC Poly(3-hydroxyalk 71.1 4.8 0.0001 41.8 4.0 51 147-201 328-378 (445)
87 PF05448 AXE1: Acetyl xylan es 70.7 20 0.00044 35.5 8.3 69 137-213 250-319 (320)
88 PRK07868 acyl-CoA synthetase; 65.9 17 0.00037 41.2 7.3 64 147-214 295-361 (994)
89 PF10503 Esterase_phd: Esteras 64.8 33 0.00071 32.4 8.0 29 150-178 170-198 (220)
90 KOG2100 Dipeptidyl aminopeptid 64.5 26 0.00056 39.0 8.3 68 149-216 681-749 (755)
91 KOG1455 Lysophospholipase [Lip 64.5 15 0.00032 36.8 5.7 64 147-212 244-310 (313)
92 PF06821 Ser_hydrolase: Serine 62.0 9.6 0.00021 34.3 3.7 40 151-198 116-155 (171)
93 TIGR01839 PHA_synth_II poly(R) 56.2 22 0.00048 38.3 5.7 51 147-201 439-489 (560)
94 KOG1515 Arylacetamide deacetyl 55.9 33 0.00071 34.6 6.6 48 151-200 270-317 (336)
95 COG3545 Predicted esterase of 53.4 26 0.00056 32.5 4.9 44 148-199 116-159 (181)
96 PRK10439 enterobactin/ferric e 52.8 1.8E+02 0.0039 29.9 11.6 40 151-192 350-390 (411)
97 TIGR01849 PHB_depoly_PhaZ poly 51.7 33 0.00071 35.5 6.0 64 150-213 339-405 (406)
98 COG4099 Predicted peptidase [G 46.8 50 0.0011 33.4 6.1 50 150-199 316-365 (387)
99 KOG4178 Soluble epoxide hydrol 45.7 1.1E+02 0.0025 30.8 8.5 61 148-214 257-320 (322)
100 KOG2112 Lysophospholipase [Lip 43.3 33 0.00071 32.4 4.1 59 150-213 145-203 (206)
101 PF11144 DUF2920: Protein of u 43.1 40 0.00087 34.9 5.0 38 150-187 294-331 (403)
102 PF09752 DUF2048: Uncharacteri 42.9 29 0.00063 35.3 3.9 57 151-212 291-347 (348)
103 COG3208 GrsT Predicted thioest 42.2 1.5E+02 0.0032 28.8 8.4 60 146-212 173-234 (244)
104 PF08538 DUF1749: Protein of u 41.7 14 0.00031 36.8 1.5 31 148-178 231-262 (303)
105 COG3040 Blc Bacterial lipocali 41.0 46 0.001 30.7 4.5 38 151-189 133-170 (174)
106 PF05728 UPF0227: Uncharacteri 35.6 66 0.0014 29.5 4.8 54 148-211 133-186 (187)
107 PF14412 AHH: A nuclease famil 34.7 77 0.0017 25.9 4.7 79 158-249 17-105 (109)
108 PF06500 DUF1100: Alpha/beta h 32.4 1.8E+02 0.0039 30.3 7.8 41 147-191 350-390 (411)
109 COG2021 MET2 Homoserine acetyl 32.2 1.2E+02 0.0026 31.2 6.3 61 148-213 305-367 (368)
110 PF09497 Med12: Transcription 32.1 16 0.00034 28.3 0.1 20 300-319 36-55 (64)
111 COG2945 Predicted hydrolase of 29.8 1E+02 0.0023 29.2 5.1 60 146-212 146-205 (210)
112 KOG2624 Triglyceride lipase-ch 29.6 1.3E+02 0.0027 31.3 6.1 52 147-199 330-381 (403)
113 PF03959 FSH1: Serine hydrolas 25.5 93 0.002 28.4 4.0 41 146-189 158-198 (212)
114 KOG0622 Ornithine decarboxylas 24.1 1.4E+02 0.003 31.3 5.2 43 163-209 190-232 (448)
115 KOG2203 GTP-binding protein [G 23.3 49 0.0011 36.0 1.9 83 165-249 438-529 (772)
116 PF15585 Imm46: Immunity prote 22.9 2E+02 0.0043 25.4 5.3 69 153-221 11-84 (129)
117 TIGR01244 conserved hypothetic 22.6 90 0.0019 26.8 3.1 28 29-56 82-109 (135)
118 smart00012 PTPc_DSPc Protein t 22.4 82 0.0018 24.2 2.6 18 33-50 39-56 (105)
119 smart00404 PTPc_motif Protein 22.4 82 0.0018 24.2 2.6 18 33-50 39-56 (105)
120 KOG4667 Predicted esterase [Li 22.3 95 0.0021 30.2 3.4 55 146-206 196-250 (269)
121 PF08357 SEFIR: SEFIR domain; 21.8 90 0.0019 26.6 3.0 52 151-206 2-54 (150)
122 PRK00979 tetrahydromethanopter 21.8 1.5E+02 0.0033 29.7 4.8 54 11-85 51-105 (308)
123 PF00561 Abhydrolase_1: alpha/ 21.5 1.3E+02 0.0029 25.8 4.1 43 25-86 37-79 (230)
124 PRK10945 gene expression modul 21.4 22 0.00049 28.2 -0.8 9 309-318 59-67 (72)
125 COG4635 HemG Flavodoxin [Energ 21.3 3.4E+02 0.0073 25.1 6.5 71 151-222 2-81 (175)
126 COG1654 BirA Biotin operon rep 20.8 1.1E+02 0.0025 24.5 3.1 23 164-186 32-54 (79)
127 PF08212 Lipocalin_2: Lipocali 20.7 97 0.0021 26.6 2.9 36 151-187 105-140 (143)
128 PRK10391 oriC-binding nucleoid 20.6 27 0.00058 27.6 -0.5 15 304-318 51-66 (71)
129 TIGR01391 dnaG DNA primase, ca 20.6 4.4E+02 0.0095 27.1 8.1 92 150-250 300-396 (415)
130 TIGR00238 KamA family protein. 20.5 2.4E+02 0.0051 28.1 6.0 113 151-275 192-307 (331)
131 PF14417 MEDS: MEDS: MEthanoge 20.4 87 0.0019 28.3 2.7 69 176-252 6-74 (191)
132 PHA02820 phospholipase-D-like 20.2 1.4E+02 0.0031 30.9 4.5 57 155-217 245-304 (424)
133 PF08249 Mastoparan: Mastopara 20.0 27 0.00058 19.4 -0.4 13 6-18 2-14 (14)
No 1
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=100.00 E-value=4.8e-36 Score=278.22 Aligned_cols=185 Identities=20% Similarity=0.248 Sum_probs=123.4
Q ss_pred HHHHHHHhhhcCCCcccchhhhccCC-CCeEEEEeCCChHHHHHHHHHHHHhcccCCCCccchhhhccCceEEEEeCCCC
Q 018541 8 LRMLVLLYMDLNPFPIFGTQELRIQT-CPVVFVALSGGTKACMHKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPV 86 (354)
Q Consensus 8 ~~~~~~a~~ll~~~~~~Ll~~l~~~~-~PIlfH~FSnGG~~~ly~v~qll~~~~~~~~~~~~yq~l~~rI~G~IfDSaPg 86 (354)
+++..++.++++ ++++..... .||+||+|||||...+..+.+.++.. .+++.+.++|+|+||||||+
T Consensus 45 ~~~~~~~~~l~~-----~l~~~~~~~~~~il~H~FSnGG~~~~~~l~~~~~~~-------~~~~~~~~~i~g~I~DS~P~ 112 (240)
T PF05705_consen 45 KRLAPAADKLLE-----LLSDSQSASPPPILFHSFSNGGSFLYSQLLEAYQSR-------KKFGKLLPRIKGIIFDSCPG 112 (240)
T ss_pred cchHHHHHHHHH-----HhhhhccCCCCCEEEEEEECchHHHHHHHHHHHHhc-------ccccccccccceeEEeCCCC
Confidence 358888889997 455555554 49999999999964444555555442 33556678899999999998
Q ss_pred CCCc--chhhccccccccccccCch-h-HH-HH-HHH-HHHhhhhcccccccc---hhhHHHHHHhhccCCCCCCEEEEe
Q 018541 87 DFTS--DFCARFGLHPTIQKIPGLS-K-LV-SW-VAK-GVTSGLDGLCLTRFE---PQRAEYWRALYNSVDLGTPFLIIC 156 (354)
Q Consensus 87 d~t~--~lg~~~~l~pai~~~~~~~-r-l~-~w-~a~-~i~~~l~~l~l~~~~---~~r~~y~~tL~~~~~~~aPrLYLY 156 (354)
..+. ..++ ++. .++... + +. .+ +.. .+...+...+..... .....+++.+ ...+..+|+||||
T Consensus 113 ~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~lylY 185 (240)
T PF05705_consen 113 IPTYSSSARA-FSA-----ALPKSSPRWFVPLWPLLQFLLRLSIISYFIFGYPDVQEYYRRALNDF-ANSPSRCPRLYLY 185 (240)
T ss_pred ccccccHHHH-HHH-----HcCccchhhHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhhh-hcCCCCCCeEEec
Confidence 7543 1221 110 112110 0 00 01 000 000000111111111 1122334433 2346668999999
Q ss_pred cCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHH
Q 018541 157 SDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLL 211 (354)
Q Consensus 157 SkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw 211 (354)
|++|++|+|+|||+|++++|++|++|+.++|++|+||+|+|.||++||++|.+||
T Consensus 186 S~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 186 SKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 9999999999999999999999999999999999999999999999999999998
No 2
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=100.00 E-value=2e-33 Score=276.78 Aligned_cols=241 Identities=28% Similarity=0.396 Sum_probs=178.6
Q ss_pred HHHHHhhhcCCCcccchhhhccCCCCeEEEEeCCChHHHHHHH-HHHHHhcccCCCCccchhhhccCceEEEEeCCCCCC
Q 018541 10 MLVLLYMDLNPFPIFGTQELRIQTCPVVFVALSGGTKACMHKA-FQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPVDF 88 (354)
Q Consensus 10 ~~~~a~~ll~~~~~~Ll~~l~~~~~PIlfH~FSnGG~~~ly~v-~qll~~~~~~~~~~~~yq~l~~rI~G~IfDSaPgd~ 88 (354)
.+.+|.+.|.+ |+++++.+++||+||+||+||..+++.+ .|..... ....+...|+||||||+..
T Consensus 89 sl~~~~~~l~~----L~~~~~~~~~pi~fh~FS~ng~~~~~si~~~~~~~~----------~~~~~~~~~~~fdS~p~~~ 154 (350)
T KOG2521|consen 89 SLSLASTRLSE----LLSDYNSDPCPIIFHVFSGNGVRLMYSISLQLIKHE----------PKAAQLSGGIIFDSAPARS 154 (350)
T ss_pred hhhHHHHHHHH----HhhhccCCcCceEEEEecCCceeehHHHHHHHhhcC----------chhHhhcCCceEecccccc
Confidence 46677555556 9999999999999999999998777777 5654331 1123457889999999874
Q ss_pred Ccc-hh--hcccccc--------------ccccccCc---hhHHHHHHHHHHhhhhcccccccchhhHHHHHHhhccCCC
Q 018541 89 TSD-FC--ARFGLHP--------------TIQKIPGL---SKLVSWVAKGVTSGLDGLCLTRFEPQRAEYWRALYNSVDL 148 (354)
Q Consensus 89 t~~-lg--~~~~l~p--------------ai~~~~~~---~rl~~w~a~~i~~~l~~l~l~~~~~~r~~y~~tL~~~~~~ 148 (354)
... .+ ..+...+ ....+... ..++.|++..+.......+.++++.+ ....
T Consensus 155 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~----------~~~~ 224 (350)
T KOG2521|consen 155 SPVQLGWAVSFSSPPDDYVARWARLNYHITLLTMAGNEGGAYLLGPLAEKISMSRKYHFLDRYEEQ----------RNEL 224 (350)
T ss_pred chhhhcceeccccCchhhHHHHHhcCeEEEEEEeeecccchhhhhhhhhccccccchHHHHHHHhh----------hhcc
Confidence 321 11 0111100 01111111 11111111111111111111111111 1123
Q ss_pred CCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHHHHHhhHHHHHhhhccc
Q 018541 149 GTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKAASVYSQRIRQLGEI 228 (354)
Q Consensus 149 ~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~~~~~~~~~~~~~~~~~ 228 (354)
.+++||+||++|.|+|++++|++++..+++|+.|+.++|++|+||+|+|.||..|++++.+|++++...+..+.+.++..
T Consensus 225 ~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~~~~~~~~~~~~~~ 304 (350)
T KOG2521|consen 225 PWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSVISSYNLKNRILGIR 304 (350)
T ss_pred cccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhcccccCCccCcccee
Confidence 56999999999999999999999999999999999999999999999999999999999999999999999999888888
Q ss_pred cCCCCccchhhhhhhhhhhhhhcccccccccccCCCCcccccCcccc
Q 018541 229 SGMEGTHDEISELICDLQNVAVNSNQSLRRVAVEPSDHFFLPSSTEL 275 (354)
Q Consensus 229 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (354)
+..+ .+|++++.||+|.++|.|.|+++||.|..+.|||++|+|.+|
T Consensus 305 ~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~s~~~ 350 (350)
T KOG2521|consen 305 ADSA-GDDPLTEKICSLFQVTLNLNRSSRRSPLVLDDHLEVPSSIPY 350 (350)
T ss_pred ecCC-CCchHHHHHHHHHHHHhccchhhhcccccccceeeccccCCC
Confidence 7776 999999999999999999999999999999999999999886
No 3
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=98.07 E-value=2.4e-05 Score=70.77 Aligned_cols=69 Identities=22% Similarity=0.245 Sum_probs=61.1
Q ss_pred CCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHHHHHh
Q 018541 148 LGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKAAS 216 (354)
Q Consensus 148 ~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~~~~~ 216 (354)
...|.|++++++|+.||.+..+++++.+++.|.+++...|++..|.--...+..++...+.+|+++.+.
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKYLK 211 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHcC
Confidence 467999999999999999999999999999999999999999999655566777888999999998754
No 4
>PRK11460 putative hydrolase; Provisional
Probab=97.56 E-value=0.0022 Score=59.82 Aligned_cols=77 Identities=18% Similarity=0.112 Sum_probs=64.9
Q ss_pred CCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHHHHHhhHHHHHhhhccc
Q 018541 149 GTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKAASVYSQRIRQLGEI 228 (354)
Q Consensus 149 ~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~~~~~~~~~~~~~~~~~ 228 (354)
..|.|.+++++|++||++..++..+..++.|.+|+.+.+++..|-= ..+....+.+|+++.+..-.....|-+.+
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i-----~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 222 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAI-----DPRLMQFALDRLRYTVPKRYWDEALSGGK 222 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCC-----CHHHHHHHHHHHHHHcchhhHHHHhccCc
Confidence 4599999999999999999999999999999999999998888874 35666888888888886666777777766
Q ss_pred cC
Q 018541 229 SG 230 (354)
Q Consensus 229 ~~ 230 (354)
-|
T Consensus 223 ~~ 224 (232)
T PRK11460 223 PG 224 (232)
T ss_pred CC
Confidence 43
No 5
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=97.50 E-value=0.0011 Score=60.53 Aligned_cols=61 Identities=30% Similarity=0.349 Sum_probs=49.2
Q ss_pred CCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHHHH
Q 018541 149 GTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKA 214 (354)
Q Consensus 149 ~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~~~ 214 (354)
..|.+++++++|+++|.+..++..+..++.|.+|+.+.|++..|-- +.+....+.+|+++.
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i-----~~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEI-----SPEELRDLREFLEKH 215 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS-------HHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCC-----CHHHHHHHHHHHhhh
Confidence 4699999999999999999999999999999999999999988843 355667889998875
No 6
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=96.83 E-value=0.016 Score=52.28 Aligned_cols=55 Identities=22% Similarity=0.380 Sum_probs=44.5
Q ss_pred CCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHHH
Q 018541 148 LGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEK 213 (354)
Q Consensus 148 ~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~~ 213 (354)
..+|.|+++++.|+++. +.++ + .+++.+.+++..|.-|+ .+|+++.+.|.+|+++
T Consensus 187 i~~P~lii~G~~D~~~~-----~~~~---~--~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 187 LTFPFYYLCGERDSKFQ-----ALAQ---Q--LALPLHVIPNAGHNAHR-ENPAAFAASLAQILRL 241 (242)
T ss_pred cCCCeEEEEeCCcchHH-----HHHH---H--hcCeEEEeCCCCCchhh-hChHHHHHHHHHHHhh
Confidence 46799999999998652 2222 1 26788999999999987 8899999999999975
No 7
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=96.81 E-value=0.0026 Score=55.73 Aligned_cols=60 Identities=17% Similarity=0.245 Sum_probs=50.1
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHH
Q 018541 147 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLL 211 (354)
Q Consensus 147 ~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw 211 (354)
...+|.|+++++.|.++|.+..+...+... +++.+.++++.|..++ .+|+++.+.|.+|+
T Consensus 186 ~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fi 245 (245)
T TIGR01738 186 NISVPFLRLYGYLDGLVPAKVVPYLDKLAP----HSELYIFAKAAHAPFL-SHAEAFCALLVAFK 245 (245)
T ss_pred cCCCCEEEEeecCCcccCHHHHHHHHHhCC----CCeEEEeCCCCCCccc-cCHHHHHHHHHhhC
Confidence 456799999999999999887776654432 5788899999999988 68999999999884
No 8
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=96.63 E-value=0.0094 Score=51.17 Aligned_cols=54 Identities=26% Similarity=0.445 Sum_probs=42.8
Q ss_pred CCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHH
Q 018541 148 LGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAA 206 (354)
Q Consensus 148 ~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~a 206 (354)
...|.|+++++.|.+++.+.++++.+.. -+++.+.++++.|..++. +|++..++
T Consensus 175 ~~~pvl~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~-~p~~~~~a 228 (228)
T PF12697_consen 175 IKVPVLVIHGEDDPIVPPESAEELADKL----PNAELVVIPGAGHFLFLE-QPDEVAEA 228 (228)
T ss_dssp SSSEEEEEEETTSSSSHHHHHHHHHHHS----TTEEEEEETTSSSTHHHH-SHHHHHHH
T ss_pred cCCCeEEeecCCCCCCCHHHHHHHHHHC----CCCEEEEECCCCCccHHH-CHHHHhcC
Confidence 4679999999999999966666555443 368899999999998885 88886543
No 9
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=96.50 E-value=0.034 Score=53.73 Aligned_cols=59 Identities=20% Similarity=0.334 Sum_probs=47.9
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHHH
Q 018541 147 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEK 213 (354)
Q Consensus 147 ~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~~ 213 (354)
...+|.|+++++.|.++|++..+.. .-.++.+.+++..|..++ .+|++..+.|.+|+++
T Consensus 312 ~i~~Pvlii~g~~D~~vp~~~~~~l-------~~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 312 SLAIPVLVIWGEQDRIIPAAHAQGL-------PDGVAVHVLPGAGHMPQM-EAAADVNRLLAEFLGK 370 (371)
T ss_pred cCCCCEEEEEECCCCccCHHHHhhc-------cCCCeEEEeCCCCCChhh-hCHHHHHHHHHHHhcc
Confidence 3567999999999999998765432 225778899999998765 6899999999999875
No 10
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=96.39 E-value=0.0076 Score=52.87 Aligned_cols=61 Identities=23% Similarity=0.432 Sum_probs=50.8
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHH
Q 018541 147 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLE 212 (354)
Q Consensus 147 ~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~ 212 (354)
...+|.|+++++.|.++|.+.++++.+... ..+.+.++++.|..++ .+|+++.+.+.+|++
T Consensus 191 ~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~-~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 191 AIAVPTLCIAGDQDGSTPPELVREIADLVP----GARFAEIRGAGHIPCV-EQPEAFNAALRDFLR 251 (251)
T ss_pred hcCCCeEEEEeccCCcCChHHHHHHHHhCC----CceEEEECCCCCcccc-cChHHHHHHHHHHhC
Confidence 345799999999999999998877665543 3577889999999987 679999999999873
No 11
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=96.31 E-value=0.009 Score=53.18 Aligned_cols=61 Identities=23% Similarity=0.336 Sum_probs=50.3
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHH
Q 018541 147 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLE 212 (354)
Q Consensus 147 ~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~ 212 (354)
...+|.|+++++.|.++|++..+++.+... +++.+.+++..|.-++ .+|+++.+.|.+|++
T Consensus 196 ~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 196 RIQHPVLLIANRDDMLVPYTQSLRLAAALP----NAQLKLLPYGGHASNV-TDPETFNRALLDFLK 256 (257)
T ss_pred ccCccEEEEecCcCcccCHHHHHHHHHhcC----CceEEEECCCCCCccc-cCHHHHHHHHHHHhc
Confidence 346799999999999999998887665432 4577788999999654 799999999999986
No 12
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=96.31 E-value=0.0067 Score=63.32 Aligned_cols=63 Identities=14% Similarity=0.245 Sum_probs=55.3
Q ss_pred CCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHHHH
Q 018541 148 LGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKA 214 (354)
Q Consensus 148 ~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~~~ 214 (354)
..+|.|+++++.|+++|.+..+.+++... +++.+.+++..|+.++..+|++|.+.+.+||+..
T Consensus 417 I~vPtLII~Ge~D~ivP~~~~~~la~~iP----~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~~ 479 (481)
T PLN03087 417 LKCDVAIFHGGDDELIPVECSYAVKAKVP----RARVKVIDDKDHITIVVGRQKEFARELEEIWRRS 479 (481)
T ss_pred CCCCEEEEEECCCCCCCHHHHHHHHHhCC----CCEEEEeCCCCCcchhhcCHHHHHHHHHHHhhcc
Confidence 46799999999999999998887755542 4788999999999999999999999999999864
No 13
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=96.22 E-value=0.018 Score=57.48 Aligned_cols=68 Identities=25% Similarity=0.340 Sum_probs=59.5
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEc-CCCCCCcccccChHhHHHHHHHHHHHHH
Q 018541 147 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKL-NGSPHIGHYEYYPIQYRAAITGLLEKAA 215 (354)
Q Consensus 147 ~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~F-e~SpHV~HmR~hPeeYw~aV~~Fw~~~~ 215 (354)
...+|.|++.++.|.++|.+..++.++.....|.+++.+.+ ++..|..++ .+|+++-++|.+|++++.
T Consensus 307 ~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~l-e~p~~~~~~L~~FL~~~~ 375 (379)
T PRK00175 307 RIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEIDSPYGHDAFL-LDDPRYGRLVRAFLERAA 375 (379)
T ss_pred cCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCchhHh-cCHHHHHHHHHHHHHhhh
Confidence 45679999999999999999999998888877777887777 499999776 889999999999999864
No 14
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=96.02 E-value=0.016 Score=58.74 Aligned_cols=68 Identities=13% Similarity=0.160 Sum_probs=57.9
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHHHHHh
Q 018541 147 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKAAS 216 (354)
Q Consensus 147 ~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~~~~~ 216 (354)
....|.|++++++|.++|.+..++.++.... -+++.+.++++.|.-++-.+|+++++.+.+|++....
T Consensus 322 ~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~--~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 322 SVTVPFMVLHGTADRVTDPLASQDLYNEAAS--RHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred cCCCCEEEEEeCCCCCCCHHHHHHHHHhcCC--CCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHhh
Confidence 4568999999999999999988888777543 3577888999999988877899999999999997653
No 15
>PHA02857 monoglyceride lipase; Provisional
Probab=95.94 E-value=0.02 Score=53.25 Aligned_cols=65 Identities=22% Similarity=0.269 Sum_probs=54.4
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccC--hHhHHHHHHHHHHHH
Q 018541 147 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYY--PIQYRAAITGLLEKA 214 (354)
Q Consensus 147 ~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~h--PeeYw~aV~~Fw~~~ 214 (354)
...+|.|++.+++|.++|.+..+++++.... +++.+.+++..|.-|.-.. .++.++.+.+|+++.
T Consensus 207 ~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~---~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 207 KIKTPILILQGTNNEISDVSGAYYFMQHANC---NREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred cCCCCEEEEecCCCCcCChHHHHHHHHHccC---CceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 4568999999999999999988888776533 6889999999999997644 678888888998875
No 16
>PRK10749 lysophospholipase L2; Provisional
Probab=95.92 E-value=0.024 Score=55.22 Aligned_cols=67 Identities=19% Similarity=0.279 Sum_probs=55.7
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHHCCC---ceEEEEcCCCCCCcccccC--hHhHHHHHHHHHHH
Q 018541 147 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGG---DVKLVKLNGSPHIGHYEYY--PIQYRAAITGLLEK 213 (354)
Q Consensus 147 ~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~---~V~~v~Fe~SpHV~HmR~h--PeeYw~aV~~Fw~~ 213 (354)
....|.|+|+++.|++++.+..+.+++..++.|. +++.+.|+++.|.-++-.+ .++.++.+.+|+++
T Consensus 257 ~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~ 328 (330)
T PRK10749 257 DITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNR 328 (330)
T ss_pred CCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhh
Confidence 4567999999999999999999999888877663 4688999999999887544 57788888888765
No 17
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=95.90 E-value=0.019 Score=53.77 Aligned_cols=62 Identities=16% Similarity=0.229 Sum_probs=49.8
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHHHH
Q 018541 147 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKA 214 (354)
Q Consensus 147 ~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~~~ 214 (354)
...+|.|+|+++.|+++|.+..++..+... + .+.+.+++ .|..|. .+|+++.++|.+|+++.
T Consensus 205 ~i~~P~lii~G~~D~~v~~~~~~~l~~~~~--~--~~~~~i~~-gH~~~~-e~p~~~~~~i~~fl~~~ 266 (276)
T TIGR02240 205 KIQQPTLVLAGDDDPIIPLINMRLLAWRIP--N--AELHIIDD-GHLFLI-TRAEAVAPIIMKFLAEE 266 (276)
T ss_pred cCCCCEEEEEeCCCCcCCHHHHHHHHHhCC--C--CEEEEEcC-CCchhh-ccHHHHHHHHHHHHHHh
Confidence 346799999999999999998888876553 2 34455565 898776 79999999999999874
No 18
>PLN02965 Probable pheophorbidase
Probab=95.89 E-value=0.021 Score=52.90 Aligned_cols=61 Identities=13% Similarity=0.078 Sum_probs=51.1
Q ss_pred CCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHHH
Q 018541 148 LGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEK 213 (354)
Q Consensus 148 ~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~~ 213 (354)
...|.|+|+++.|.++|.+..+.+++... ..+.+.++++.|.-|+ .+|++..++|.+|.+.
T Consensus 192 i~vP~lvi~g~~D~~~~~~~~~~~~~~~~----~a~~~~i~~~GH~~~~-e~p~~v~~~l~~~~~~ 252 (255)
T PLN02965 192 EKVPRVYIKTAKDNLFDPVRQDVMVENWP----PAQTYVLEDSDHSAFF-SVPTTLFQYLLQAVSS 252 (255)
T ss_pred CCCCEEEEEcCCCCCCCHHHHHHHHHhCC----cceEEEecCCCCchhh-cCHHHHHHHHHHHHHH
Confidence 56799999999999999976666654443 3567889999999998 8999999999999775
No 19
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=95.88 E-value=0.027 Score=57.06 Aligned_cols=66 Identities=17% Similarity=0.299 Sum_probs=58.3
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCC-CCCCcccccChHhHHHHHHHHHHH
Q 018541 147 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNG-SPHIGHYEYYPIQYRAAITGLLEK 213 (354)
Q Consensus 147 ~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~-SpHV~HmR~hPeeYw~aV~~Fw~~ 213 (354)
...+|.|++.++.|.++|.+..++.++.....|-+++.+..++ ..|..|+ .+|+++.++|.+|+++
T Consensus 321 ~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~l-e~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 321 NIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGV-FDIHLFEKKIYEFLNR 387 (389)
T ss_pred cCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhh-cCHHHHHHHHHHHHcc
Confidence 3567999999999999999999998888877677788898985 8999988 6999999999999975
No 20
>PRK10162 acetyl esterase; Provisional
Probab=95.78 E-value=0.18 Score=49.22 Aligned_cols=44 Identities=18% Similarity=0.090 Sum_probs=40.1
Q ss_pred CCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcc
Q 018541 150 TPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGH 195 (354)
Q Consensus 150 aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~H 195 (354)
.|.++++++.|++.+ +.+.+++.+++.|++|+.+.|++-.|.=.
T Consensus 249 Pp~~i~~g~~D~L~d--e~~~~~~~L~~aGv~v~~~~~~g~~H~f~ 292 (318)
T PRK10162 249 PPCFIAGAEFDPLLD--DSRLLYQTLAAHQQPCEFKLYPGTLHAFL 292 (318)
T ss_pred CCeEEEecCCCcCcC--hHHHHHHHHHHcCCCEEEEEECCCceehh
Confidence 389999999999974 78999999999999999999999999754
No 21
>PRK10566 esterase; Provisional
Probab=95.73 E-value=0.046 Score=49.99 Aligned_cols=61 Identities=16% Similarity=0.163 Sum_probs=51.2
Q ss_pred CCCEEEEecCCCCccChHHHHHHHHHHHHCCC--ceEEEEcCCCCCCcccccChHhHHHHHHHHHHHH
Q 018541 149 GTPFLIICSDNDELAPQQVIYNFARHLLALGG--DVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKA 214 (354)
Q Consensus 149 ~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~--~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~~~ 214 (354)
.+|.|++++++|+++|+++.+++.+..++.|. +++.+.++++.|.- .|+ ....+.+|+++.
T Consensus 186 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~----~~~-~~~~~~~fl~~~ 248 (249)
T PRK10566 186 DRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRI----TPE-ALDAGVAFFRQH 248 (249)
T ss_pred CCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCcc----CHH-HHHHHHHHHHhh
Confidence 46999999999999999999999999999987 47888899999962 344 467788888864
No 22
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=95.72 E-value=0.038 Score=59.07 Aligned_cols=72 Identities=18% Similarity=0.219 Sum_probs=59.8
Q ss_pred cCCCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHHHHHh
Q 018541 145 SVDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKAAS 216 (354)
Q Consensus 145 ~~~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~~~~~ 216 (354)
.....+|.|+|.|++|.-||.+.-+.+.+.++++|.+|+.+.|++..|-==...|-.+..+.+.+|+++.+.
T Consensus 547 ~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~~~ 618 (620)
T COG1506 547 ADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDWFKRHLK 618 (620)
T ss_pred hcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHHhc
Confidence 346678999999999999999999999999999999999999999999655545566566666677766543
No 23
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=95.68 E-value=0.19 Score=51.21 Aligned_cols=61 Identities=21% Similarity=0.098 Sum_probs=48.3
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHHHHH
Q 018541 147 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKAA 215 (354)
Q Consensus 147 ~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~~~~ 215 (354)
...+|.|++++++|+++|.++.+.+++.. -+.+.+.++++ |+-..|++....+.+|+++.+
T Consensus 353 ~i~~PvLiI~G~~D~ivP~~~a~~l~~~~----~~~~l~~i~~~----~~~e~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 353 RCPTPMLSGYWKNDPFSPEEDSRLIASSS----ADGKLLEIPFK----PVYRNFDKALQEISDWLEDRL 413 (414)
T ss_pred CCCCcEEEEecCCCCCCCHHHHHHHHHhC----CCCeEEEccCC----CccCCHHHHHHHHHHHHHHHh
Confidence 35679999999999999999999665443 24567788887 444589999999999998764
No 24
>COG1647 Esterase/lipase [General function prediction only]
Probab=95.61 E-value=0.082 Score=50.45 Aligned_cols=64 Identities=25% Similarity=0.301 Sum_probs=56.9
Q ss_pred CCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHHH
Q 018541 148 LGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEK 213 (354)
Q Consensus 148 ~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~~ 213 (354)
...|.+.+-+++|++||.+..+-..++...- +.+.+.|++|.||=-.-...|.-.++|..||++
T Consensus 180 I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~--~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 180 IYSPTLVVQGRQDEMVPAESANFIYDHVESD--DKELKWLEGSGHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred cccchhheecccCCCCCHHHHHHHHHhccCC--cceeEEEccCCceeecchhHHHHHHHHHHHhhC
Confidence 4569999999999999999999999888763 778899999999988888899999999999863
No 25
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=95.57 E-value=0.038 Score=54.13 Aligned_cols=65 Identities=26% Similarity=0.270 Sum_probs=53.6
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEE-EcCCCCCCcccccChHhHHHHHHHHHH
Q 018541 147 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLV-KLNGSPHIGHYEYYPIQYRAAITGLLE 212 (354)
Q Consensus 147 ~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v-~Fe~SpHV~HmR~hPeeYw~aV~~Fw~ 212 (354)
...+|.|+|.++.|.++|.+.++++++...+....|+.+ .++++.|..|+ .+|+++.++|.+|++
T Consensus 286 ~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~~~~GH~~~l-e~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 286 RIKAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIESPYGHDAFL-VETDQVEELIRGFLR 351 (351)
T ss_pred hCCCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeCCCCCcchhh-cCHHHHHHHHHHHhC
Confidence 346799999999999999999999988887654444333 46789999998 789999999999974
No 26
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=95.57 E-value=0.045 Score=54.13 Aligned_cols=66 Identities=21% Similarity=0.282 Sum_probs=52.5
Q ss_pred CCCCEEEEecCCCCccChHH-HHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHHHH
Q 018541 148 LGTPFLIICSDNDELAPQQV-IYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKA 214 (354)
Q Consensus 148 ~~aPrLYLYSkaD~LVp~~d-VE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~~~ 214 (354)
..+|.|+|+++.|+++|.+. +.+++++..+.=-+++.+.++++.|.-|+ .+|++..+.|.+|+++.
T Consensus 291 i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~-E~Pe~~~~~I~~FL~~~ 357 (360)
T PLN02679 291 ISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHD-DRPDLVHEKLLPWLAQL 357 (360)
T ss_pred cCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccc-cCHHHHHHHHHHHHHhc
Confidence 46799999999999999863 33455555443335788899999999886 67999999999999863
No 27
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=95.55 E-value=0.03 Score=51.08 Aligned_cols=60 Identities=18% Similarity=0.188 Sum_probs=49.1
Q ss_pred CCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHH
Q 018541 148 LGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLE 212 (354)
Q Consensus 148 ~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~ 212 (354)
..+|.|+++++.|.++|.+.+++.++... .++.+.++++.|.-++ .+|+++.+.|.+|++
T Consensus 219 i~~P~lii~g~~D~~vp~~~~~~~~~~~~----~~~~~~~~~~gH~~~~-e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 219 ITIPLHLIAGEEDKAVPPDESKRAATRVP----TATLHVVPGGGHLVHE-EQADGVVGLILQAAE 278 (278)
T ss_pred CCCCEEEEEeCCCcccCHHHHHHHHHhcc----CCeEEEECCCCCcccc-cCHHHHHHHHHHHhC
Confidence 45799999999999999998888765543 3567788888887665 579999999999974
No 28
>COG0400 Predicted esterase [General function prediction only]
Probab=95.45 E-value=0.12 Score=48.35 Aligned_cols=61 Identities=26% Similarity=0.319 Sum_probs=49.0
Q ss_pred CCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHHHH
Q 018541 148 LGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKA 214 (354)
Q Consensus 148 ~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~~~ 214 (354)
...|.|.++++.|++||...-++..+..++.|.+|+.+.++ ..| -- .++++ +++.+||.+.
T Consensus 145 ~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-~GH---~i-~~e~~-~~~~~wl~~~ 205 (207)
T COG0400 145 AGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE-GGH---EI-PPEEL-EAARSWLANT 205 (207)
T ss_pred CCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec-CCC---cC-CHHHH-HHHHHHHHhc
Confidence 34599999999999999999999999999999999999988 444 32 24444 6667777654
No 29
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=95.43 E-value=0.039 Score=51.96 Aligned_cols=62 Identities=16% Similarity=0.248 Sum_probs=50.1
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHHH
Q 018541 147 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEK 213 (354)
Q Consensus 147 ~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~~ 213 (354)
...+|.|+|+++.|.++|.+..+.. ++.--..+.+.+++..|.-|+ .+|++..+.|.+|+++
T Consensus 232 ~i~~P~lvi~G~~D~~~~~~~~~~~----~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 232 AVKCPVLIAWGEKDPWEPVELGRAY----ANFDAVEDFIVLPGVGHCPQD-EAPELVNPLIESFVAR 293 (294)
T ss_pred hcCCCeEEEEecCCCCCChHHHHHH----HhcCCccceEEeCCCCCChhh-hCHHHHHHHHHHHHhc
Confidence 3567999999999999998766653 222223577889999999997 8899999999999975
No 30
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=95.42 E-value=0.066 Score=48.66 Aligned_cols=68 Identities=24% Similarity=0.267 Sum_probs=48.3
Q ss_pred CCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHHHHH
Q 018541 148 LGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKAA 215 (354)
Q Consensus 148 ~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~~~~ 215 (354)
..+|.|++++++|++++.+.+++..+.+++.|.+++.+.|++..|-=-.+..+..--.+-.+.|++..
T Consensus 144 ~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~ 211 (218)
T PF01738_consen 144 IKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTL 211 (218)
T ss_dssp --S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHH
T ss_pred cCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHH
Confidence 45699999999999999999999999999999999999999999976666666322334445555443
No 31
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=95.29 E-value=0.049 Score=49.03 Aligned_cols=60 Identities=13% Similarity=0.281 Sum_probs=47.2
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHH
Q 018541 147 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLE 212 (354)
Q Consensus 147 ~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~ 212 (354)
...+|.|+++++.|.+ +.+..+..++... .++.+.++++.|..++ .+|+++.+.|.+|++
T Consensus 229 ~i~~P~lii~G~~D~~-~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 229 EIKVPTLLTVGEFDTM-TPEAAREMQELIA----GSRLVVFPDGSHMTMI-EDPEVYFKLLSDFIR 288 (288)
T ss_pred ccCCCEEEEecCCCcc-CHHHHHHHHHhcc----CCeEEEeCCCCCCccc-CCHHHHHHHHHHHhC
Confidence 3567999999999985 5566666554432 4567889999999888 589999999999974
No 32
>PRK03592 haloalkane dehalogenase; Provisional
Probab=95.26 E-value=0.05 Score=51.30 Aligned_cols=65 Identities=17% Similarity=0.255 Sum_probs=51.8
Q ss_pred CCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHHHHHh
Q 018541 148 LGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKAAS 216 (354)
Q Consensus 148 ~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~~~~~ 216 (354)
..+|.|+|+++.|.+++....++.+.+.-. +.+.+.++++.|.-|+ .+|++-.+++.+|+++...
T Consensus 227 i~~P~lii~G~~D~~~~~~~~~~~~~~~~~---~~~~~~i~~~gH~~~~-e~p~~v~~~i~~fl~~~~~ 291 (295)
T PRK03592 227 SDVPKLLINAEPGAILTTGAIRDWCRSWPN---QLEITVFGAGLHFAQE-DSPEEIGAAIAAWLRRLRL 291 (295)
T ss_pred CCCCeEEEeccCCcccCcHHHHHHHHHhhh---hcceeeccCcchhhhh-cCHHHHHHHHHHHHHHhcc
Confidence 467999999999999966666665544332 4677788999999996 6899999999999987543
No 33
>PRK07581 hypothetical protein; Validated
Probab=95.16 E-value=0.058 Score=52.29 Aligned_cols=64 Identities=13% Similarity=0.067 Sum_probs=52.6
Q ss_pred CCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCC-CCCCcccccChHhHHHHHHHHHHHHHh
Q 018541 148 LGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNG-SPHIGHYEYYPIQYRAAITGLLEKAAS 216 (354)
Q Consensus 148 ~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~-SpHV~HmR~hPeeYw~aV~~Fw~~~~~ 216 (354)
..+|.|+|+++.|.++|.+..+..++... +.+.+.+++ +.|..++ ..|+++.+.|.+|+++..+
T Consensus 274 I~~PtLvI~G~~D~~~p~~~~~~l~~~ip----~a~l~~i~~~~GH~~~~-~~~~~~~~~~~~~~~~~~~ 338 (339)
T PRK07581 274 ITAKTFVMPISTDLYFPPEDCEAEAALIP----NAELRPIESIWGHLAGF-GQNPADIAFIDAALKELLA 338 (339)
T ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHhCC----CCeEEEeCCCCCccccc-cCcHHHHHHHHHHHHHHHh
Confidence 56799999999999999988776654432 257788898 8999977 7789999999999998754
No 34
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=95.07 E-value=0.032 Score=54.53 Aligned_cols=65 Identities=18% Similarity=0.198 Sum_probs=53.4
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCC-CCCCcccccChHhHHHHHHHHHHHHH
Q 018541 147 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNG-SPHIGHYEYYPIQYRAAITGLLEKAA 215 (354)
Q Consensus 147 ~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~-SpHV~HmR~hPeeYw~aV~~Fw~~~~ 215 (354)
...+|.|+++++.|.++|.++.++.++.... ..+.+.+++ +.|..++ .+|++..++|.+|++++-
T Consensus 275 ~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p---~a~l~~i~~~aGH~~~l-E~Pe~~~~~l~~FL~~~~ 340 (343)
T PRK08775 275 AIRVPTVVVAVEGDRLVPLADLVELAEGLGP---RGSLRVLRSPYGHDAFL-KETDRIDAILTTALRSTG 340 (343)
T ss_pred cCCCCeEEEEeCCCEeeCHHHHHHHHHHcCC---CCeEEEEeCCccHHHHh-cCHHHHHHHHHHHHHhcc
Confidence 4567999999999999999888776655532 467888984 8998888 589999999999998754
No 35
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=94.97 E-value=0.061 Score=51.80 Aligned_cols=65 Identities=18% Similarity=0.239 Sum_probs=47.8
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccCh----HhHHHHHHHHHHHH
Q 018541 147 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYP----IQYRAAITGLLEKA 214 (354)
Q Consensus 147 ~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hP----eeYw~aV~~Fw~~~ 214 (354)
...+|.|+++++.|.++|.+..+++++..... +.+.+.|+++.|.-++ .+| +++++.+.+|+++.
T Consensus 249 ~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~--~~~l~~~~~a~H~~~~-e~pd~~~~~~~~~i~~fl~~~ 317 (330)
T PLN02298 249 DVSIPFIVLHGSADVVTDPDVSRALYEEAKSE--DKTIKIYDGMMHSLLF-GEPDENIEIVRRDILSWLNER 317 (330)
T ss_pred hcCCCEEEEecCCCCCCCHHHHHHHHHHhccC--CceEEEcCCcEeeeec-CCCHHHHHHHHHHHHHHHHHh
Confidence 35679999999999999999998887776533 4678889887776544 234 45666677776653
No 36
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=94.89 E-value=0.068 Score=49.40 Aligned_cols=61 Identities=11% Similarity=0.160 Sum_probs=50.7
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHH
Q 018541 147 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLE 212 (354)
Q Consensus 147 ~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~ 212 (354)
...+|.|+++++.|++++.+..++.++... +++.+.++++.|.- +..+|++..++|.+|++
T Consensus 221 ~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~----~~~~~~i~~agH~~-~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 221 EIKAKTLVTWGRDDRFVPLDHGLKLLWNMP----DAQLHVFSRCGHWA-QWEHADAFNRLVIDFLR 281 (282)
T ss_pred hCCCCEEEEEccCCCcCCchhHHHHHHhCC----CCEEEEeCCCCcCC-cccCHHHHHHHHHHHhh
Confidence 346799999999999999987777666553 47778899999996 55899999999999985
No 37
>PRK03204 haloalkane dehalogenase; Provisional
Probab=94.57 E-value=0.078 Score=50.44 Aligned_cols=58 Identities=22% Similarity=0.194 Sum_probs=46.0
Q ss_pred CCCEEEEecCCCCccChHHH-HHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHH
Q 018541 149 GTPFLIICSDNDELAPQQVI-YNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLL 211 (354)
Q Consensus 149 ~aPrLYLYSkaD~LVp~~dV-E~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw 211 (354)
.+|.|+|+++.|.+++...+ +.+.+... +.+.+.++++.|.-|+ .+|++..+.+.+|+
T Consensus 227 ~~PtliI~G~~D~~~~~~~~~~~~~~~ip----~~~~~~i~~aGH~~~~-e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 227 TKPTLLVWGMKDVAFRPKTILPRLRATFP----DHVLVELPNAKHFIQE-DAPDRIAAAIIERF 285 (286)
T ss_pred CCCeEEEecCCCcccCcHHHHHHHHHhcC----CCeEEEcCCCcccccc-cCHHHHHHHHHHhc
Confidence 68999999999999976543 33333222 4677899999999888 78999999999986
No 38
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=94.56 E-value=0.32 Score=46.23 Aligned_cols=46 Identities=20% Similarity=0.157 Sum_probs=40.6
Q ss_pred CCCEEEEecCCCCccCh-HHHHHHHHHHHHCCCceEEEEcCCCCCCc
Q 018541 149 GTPFLIICSDNDELAPQ-QVIYNFARHLLALGGDVKLVKLNGSPHIG 194 (354)
Q Consensus 149 ~aPrLYLYSkaD~LVp~-~dVE~ha~ear~~G~~V~~v~Fe~SpHV~ 194 (354)
..|.++.+++.|+++|. ...+.+.+.+++.|.+|+...+++..|.=
T Consensus 211 ~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~~~~g~~H~f 257 (275)
T TIGR02821 211 HSTILIDQGTADQFLDEQLRPDAFEQACRAAGQALTLRRQAGYDHSY 257 (275)
T ss_pred CCCeeEeecCCCcccCccccHHHHHHHHHHcCCCeEEEEeCCCCccc
Confidence 44777779999999999 67889999999999999999999999973
No 39
>PRK10349 carboxylesterase BioH; Provisional
Probab=94.50 E-value=0.078 Score=48.69 Aligned_cols=62 Identities=16% Similarity=0.277 Sum_probs=49.7
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHHH
Q 018541 147 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEK 213 (354)
Q Consensus 147 ~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~~ 213 (354)
...+|.|+|.++.|.++|.+..+.+.+... ..+.+.++++.|.-++ .+|++..++|.+|-++
T Consensus 194 ~i~~P~lii~G~~D~~~~~~~~~~~~~~i~----~~~~~~i~~~gH~~~~-e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 194 NVSMPFLRLYGYLDGLVPRKVVPMLDKLWP----HSESYIFAKAAHAPFI-SHPAEFCHLLVALKQR 255 (256)
T ss_pred hcCCCeEEEecCCCccCCHHHHHHHHHhCC----CCeEEEeCCCCCCccc-cCHHHHHHHHHHHhcc
Confidence 456799999999999999876654444432 3577889999999988 7999999999988653
No 40
>PRK06489 hypothetical protein; Provisional
Probab=94.45 E-value=0.085 Score=51.95 Aligned_cols=63 Identities=21% Similarity=0.226 Sum_probs=49.4
Q ss_pred CCCCCEEEEecCCCCccChHHH--HHHHHHHHHCCCceEEEEcCCC----CCCcccccChHhHHHHHHHHHHHHH
Q 018541 147 DLGTPFLIICSDNDELAPQQVI--YNFARHLLALGGDVKLVKLNGS----PHIGHYEYYPIQYRAAITGLLEKAA 215 (354)
Q Consensus 147 ~~~aPrLYLYSkaD~LVp~~dV--E~ha~ear~~G~~V~~v~Fe~S----pHV~HmR~hPeeYw~aV~~Fw~~~~ 215 (354)
...+|.|++.++.|.++|.+.. +.+++... +.+.+.++++ .|+.| .+|++|.++|.+|+++..
T Consensus 290 ~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip----~a~l~~i~~a~~~~GH~~~--e~P~~~~~~i~~FL~~~~ 358 (360)
T PRK06489 290 KIKAPVLAINSADDERNPPETGVMEAALKRVK----HGRLVLIPASPETRGHGTT--GSAKFWKAYLAEFLAQVP 358 (360)
T ss_pred hCCCCEEEEecCCCcccChhhHHHHHHHHhCc----CCeEEEECCCCCCCCcccc--cCHHHHHHHHHHHHHhcc
Confidence 3567999999999999998764 44443332 3578889986 99885 699999999999998653
No 41
>PLN02578 hydrolase
Probab=93.99 E-value=0.14 Score=50.31 Aligned_cols=60 Identities=23% Similarity=0.252 Sum_probs=46.9
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHH
Q 018541 147 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLE 212 (354)
Q Consensus 147 ~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~ 212 (354)
...+|.|+++++.|.++|.+..++..+... +. +.+.. ++.|+.|. .+|+++.++|.+|++
T Consensus 294 ~i~~PvLiI~G~~D~~v~~~~~~~l~~~~p--~a--~l~~i-~~GH~~~~-e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 294 KLSCPLLLLWGDLDPWVGPAKAEKIKAFYP--DT--TLVNL-QAGHCPHD-EVPEQVNKALLEWLS 353 (354)
T ss_pred cCCCCEEEEEeCCCCCCCHHHHHHHHHhCC--CC--EEEEe-CCCCCccc-cCHHHHHHHHHHHHh
Confidence 356799999999999999998777655542 33 33444 58899875 689999999999986
No 42
>PLN02511 hydrolase
Probab=93.98 E-value=0.081 Score=53.22 Aligned_cols=76 Identities=20% Similarity=0.200 Sum_probs=55.0
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHh------HHHHHHHHHHHHHhhHHH
Q 018541 147 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQ------YRAAITGLLEKAASVYSQ 220 (354)
Q Consensus 147 ~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPee------Yw~aV~~Fw~~~~~~~~~ 220 (354)
...+|.|+|++++|+++|.+.+.... .+..-.++.+..+++.|++++-. |+. +.+.+.+|++........
T Consensus 296 ~I~vPtLiI~g~dDpi~p~~~~~~~~---~~~~p~~~l~~~~~gGH~~~~E~-p~~~~~~~w~~~~i~~Fl~~~~~~~~~ 371 (388)
T PLN02511 296 HVRVPLLCIQAANDPIAPARGIPRED---IKANPNCLLIVTPSGGHLGWVAG-PEAPFGAPWTDPVVMEFLEALEEGKSS 371 (388)
T ss_pred cCCCCeEEEEcCCCCcCCcccCcHhH---HhcCCCEEEEECCCcceeccccC-CCCCCCCccHHHHHHHHHHHHHHhccc
Confidence 46679999999999999987653211 12234688899999999999854 554 468899999887666554
Q ss_pred HHhhhc
Q 018541 221 RIRQLG 226 (354)
Q Consensus 221 ~~~~~~ 226 (354)
..+.|.
T Consensus 372 ~~~~~~ 377 (388)
T PLN02511 372 TPAFNS 377 (388)
T ss_pred cccccc
Confidence 445553
No 43
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=93.97 E-value=0.13 Score=50.19 Aligned_cols=65 Identities=18% Similarity=0.171 Sum_probs=48.9
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHh----HHHHHHHHHHHH
Q 018541 147 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQ----YRAAITGLLEKA 214 (354)
Q Consensus 147 ~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPee----Yw~aV~~Fw~~~ 214 (354)
...+|.|+|++++|.++|.+..+++.+.+.. -+++.+.++++.|.-+. .+|++ ..+.+.+|+++.
T Consensus 277 ~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~--~~~~l~~i~~~gH~l~~-e~p~~~~~~v~~~i~~wL~~~ 345 (349)
T PLN02385 277 EVSLPLLILHGEADKVTDPSVSKFLYEKASS--SDKKLKLYEDAYHSILE-GEPDEMIFQVLDDIISWLDSH 345 (349)
T ss_pred cCCCCEEEEEeCCCCccChHHHHHHHHHcCC--CCceEEEeCCCeeeccc-CCChhhHHHHHHHHHHHHHHh
Confidence 4567999999999999999988888766543 25678889999997543 56776 445566776654
No 44
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=93.93 E-value=0.15 Score=44.41 Aligned_cols=60 Identities=25% Similarity=0.397 Sum_probs=46.7
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHH
Q 018541 147 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLE 212 (354)
Q Consensus 147 ~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~ 212 (354)
...+|.|++.++.|.+++ +..+.+.+..-.++.+.++++.|..++ .+|++..+.+.+|++
T Consensus 192 ~~~~P~l~i~g~~D~~~~-----~~~~~~~~~~~~~~~~~~~~~gH~~~~-e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 192 ALTIPVLYLCGEKDEKFV-----QIAKEMQKLLPNLTLVIIANAGHNIHL-ENPEAFAKILLAFLE 251 (251)
T ss_pred CCCCceEEEeeCcchHHH-----HHHHHHHhcCCCCcEEEEcCCCCCcCc-cChHHHHHHHHHHhC
Confidence 356799999999998752 234455555556788889999999888 569999999999873
No 45
>PRK00870 haloalkane dehalogenase; Provisional
Probab=93.90 E-value=0.11 Score=49.30 Aligned_cols=64 Identities=14% Similarity=0.160 Sum_probs=49.2
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHHH
Q 018541 147 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEK 213 (354)
Q Consensus 147 ~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~~ 213 (354)
...+|.|+|+++.|+++|.+. +++.+..... -.++.+.++++.|.-|+ .+|++..+.+.+|+++
T Consensus 237 ~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~-~~~~~~~i~~~gH~~~~-e~p~~~~~~l~~fl~~ 300 (302)
T PRK00870 237 RWDKPFLTAFSDSDPITGGGD-AILQKRIPGA-AGQPHPTIKGAGHFLQE-DSGEELAEAVLEFIRA 300 (302)
T ss_pred cCCCceEEEecCCCCcccCch-HHHHhhcccc-cccceeeecCCCccchh-hChHHHHHHHHHHHhc
Confidence 456799999999999999865 6555544321 12345678999999764 8899999999999875
No 46
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=93.72 E-value=0.2 Score=49.21 Aligned_cols=64 Identities=19% Similarity=0.142 Sum_probs=53.4
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHH
Q 018541 147 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLE 212 (354)
Q Consensus 147 ~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~ 212 (354)
+...|.|++.++.|.+++.+..+++++.+... +++.+.|+++.|.-+.-.++++..+.+.+|++
T Consensus 268 ~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~--~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 268 PKDIPILFIHSKGDCVCSYEGTVSFYNKLSIS--NKELHTLEDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred CCCCCEEEEEeCCCCccCHHHHHHHHHhccCC--CcEEEEECCCCCCCccCCCHHHHHHHHHHHhh
Confidence 33579999999999999999888776655432 57788899999999988888999999998875
No 47
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=93.67 E-value=0.17 Score=51.20 Aligned_cols=60 Identities=18% Similarity=0.207 Sum_probs=51.4
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHH
Q 018541 147 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLE 212 (354)
Q Consensus 147 ~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~ 212 (354)
...+|.|+++++.|.+++.+..+++++.. +.+.+..+++.|.-|+ .+|++..++|.+|+.
T Consensus 323 ~i~vPvLiI~G~~D~~v~~~~~~~~a~~~-----~a~l~vIp~aGH~~~~-E~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 323 NWKTPITVCWGLRDRWLNYDGVEDFCKSS-----QHKLIELPMAGHHVQE-DCGEELGGIISGILS 382 (383)
T ss_pred cCCCCEEEEeeCCCCCcCHHHHHHHHHhc-----CCeEEEECCCCCCcch-hCHHHHHHHHHHHhh
Confidence 34679999999999999998877766642 4577889999999998 799999999999986
No 48
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=93.67 E-value=0.25 Score=47.92 Aligned_cols=63 Identities=16% Similarity=0.152 Sum_probs=50.1
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHHHH
Q 018541 147 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKA 214 (354)
Q Consensus 147 ~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~~~ 214 (354)
...+|.|++.+.+|++||+..=.+..+..+++ |+-.-=++..|+.-.+ +.+|...+.+|....
T Consensus 190 ~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~---~epl~v~g~gH~~~~~--~~~yi~~l~~f~~~~ 252 (258)
T KOG1552|consen 190 KITCPVLIIHGTDDEVVDFSHGKALYERCKEK---VEPLWVKGAGHNDIEL--YPEYIEHLRRFISSV 252 (258)
T ss_pred eccCCEEEEecccCceecccccHHHHHhcccc---CCCcEEecCCCccccc--CHHHHHHHHHHHHHh
Confidence 45679999999999999999988888888874 5555556788877654 567888888887654
No 49
>PRK10673 acyl-CoA esterase; Provisional
Probab=93.29 E-value=0.23 Score=45.03 Aligned_cols=62 Identities=18% Similarity=0.178 Sum_probs=49.5
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHHH
Q 018541 147 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEK 213 (354)
Q Consensus 147 ~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~~ 213 (354)
...+|.|+|+++.|++++.+..+..++.. -+++.+.+++..|.-+ -.+|+++.+.+.+|+++
T Consensus 193 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~-~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 193 AWPHPALFIRGGNSPYVTEAYRDDLLAQF----PQARAHVIAGAGHWVH-AEKPDAVLRAIRRYLND 254 (255)
T ss_pred CCCCCeEEEECCCCCCCCHHHHHHHHHhC----CCcEEEEeCCCCCeee-ccCHHHHHHHHHHHHhc
Confidence 34579999999999999976666554433 3577788999999765 46799999999999875
No 50
>PLN02872 triacylglycerol lipase
Probab=93.12 E-value=0.24 Score=50.46 Aligned_cols=64 Identities=14% Similarity=0.117 Sum_probs=51.2
Q ss_pred CCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCccc--ccChHhHHHHHHHHHHHHH
Q 018541 149 GTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHY--EYYPIQYRAAITGLLEKAA 215 (354)
Q Consensus 149 ~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~Hm--R~hPeeYw~aV~~Fw~~~~ 215 (354)
..|.+.+||++|.+++.++++..+++... .++.+.+++..|..++ ...|++-.+.|.+|+++..
T Consensus 325 ~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~---~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~ 390 (395)
T PLN02872 325 SLPLWMGYGGTDGLADVTDVEHTLAELPS---KPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSLG 390 (395)
T ss_pred CccEEEEEcCCCCCCCHHHHHHHHHHCCC---ccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHhh
Confidence 56999999999999999999988876643 3567788888888444 4568888899999998643
No 51
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=93.04 E-value=0.26 Score=48.15 Aligned_cols=68 Identities=19% Similarity=0.202 Sum_probs=57.5
Q ss_pred CCCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCc-eEEEEcCCCCCCcccccCh--HhHHHHHHHHHHHHH
Q 018541 146 VDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGD-VKLVKLNGSPHIGHYEYYP--IQYRAAITGLLEKAA 215 (354)
Q Consensus 146 ~~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~-V~~v~Fe~SpHV~HmR~hP--eeYw~aV~~Fw~~~~ 215 (354)
.....|.|.+++++|.++++ ++...+-.++.|.. ++.+.+++.-|=-|.-.+. +++++.+.+|+.+..
T Consensus 225 ~~~~~PvLll~g~~D~vv~~--~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~ 295 (298)
T COG2267 225 PAIALPVLLLQGGDDRVVDN--VEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEAL 295 (298)
T ss_pred ccccCCEEEEecCCCccccC--cHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhc
Confidence 34567999999999999997 66666666666665 7999999999999999999 999999999998764
No 52
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=92.96 E-value=0.14 Score=45.62 Aligned_cols=44 Identities=36% Similarity=0.428 Sum_probs=38.3
Q ss_pred CEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCccc
Q 018541 151 PFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHY 196 (354)
Q Consensus 151 PrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~Hm 196 (354)
|.++++++.|.++ .+.+.+++.+++.|.+|+.+.+++.+|+=+|
T Consensus 168 p~~i~~g~~D~l~--~~~~~~~~~L~~~gv~v~~~~~~g~~H~f~~ 211 (211)
T PF07859_consen 168 PTLIIHGEDDVLV--DDSLRFAEKLKKAGVDVELHVYPGMPHGFFM 211 (211)
T ss_dssp EEEEEEETTSTTH--HHHHHHHHHHHHTT-EEEEEEETTEETTGGG
T ss_pred Ceeeeccccccch--HHHHHHHHHHHHCCCCEEEEEECCCeEEeeC
Confidence 8888899999886 5789999999999999999999999998554
No 53
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=92.73 E-value=0.34 Score=48.01 Aligned_cols=60 Identities=25% Similarity=0.511 Sum_probs=52.0
Q ss_pred CCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHHHH
Q 018541 150 TPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKA 214 (354)
Q Consensus 150 aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~~~ 214 (354)
+|.|++.++.|+++|.+..+++.++. -.++.+.-++..|+-|+ .-|+++.+.+..||...
T Consensus 265 ~pvlii~G~~D~~~p~~~~~~~~~~~----pn~~~~~I~~~gH~~h~-e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 265 CPVLIIWGDKDQIVPLELAEELKKKL----PNAELVEIPGAGHLPHL-ERPEEVAALLRSFIARL 324 (326)
T ss_pred CceEEEEcCcCCccCHHHHHHHHhhC----CCceEEEeCCCCccccc-CCHHHHHHHHHHHHHHh
Confidence 79999999999999999555554444 56888899999999999 99999999999999875
No 54
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=92.60 E-value=0.41 Score=46.57 Aligned_cols=55 Identities=25% Similarity=0.312 Sum_probs=48.6
Q ss_pred CCCEEEEecCCCCccChHHHHHHHHHHHHCC-CceEEEEcCCCCCCcccccChHhH
Q 018541 149 GTPFLIICSDNDELAPQQVIYNFARHLLALG-GDVKLVKLNGSPHIGHYEYYPIQY 203 (354)
Q Consensus 149 ~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G-~~V~~v~Fe~SpHV~HmR~hPeeY 203 (354)
.+|.++.+|..|++||+...++.++++.++| .+|+.+......|.+-+...-...
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~~~~~a 274 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFASAPDA 274 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhcCcHHH
Confidence 4699999999999999999999999999999 799999999999988765554433
No 55
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=92.35 E-value=0.38 Score=45.77 Aligned_cols=59 Identities=12% Similarity=0.122 Sum_probs=46.2
Q ss_pred CCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHHH
Q 018541 149 GTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEK 213 (354)
Q Consensus 149 ~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~~ 213 (354)
..|.|||+++.|.++|.+..+.+++... |. +.+..+ +.|..++ .+|++-.+.|.++...
T Consensus 211 ~vP~l~I~g~~D~~ip~~~~~~m~~~~~--~~--~~~~l~-~gH~p~l-s~P~~~~~~i~~~a~~ 269 (273)
T PLN02211 211 KVPRVYIKTLHDHVVKPEQQEAMIKRWP--PS--QVYELE-SDHSPFF-STPFLLFGLLIKAAAS 269 (273)
T ss_pred ccceEEEEeCCCCCCCHHHHHHHHHhCC--cc--EEEEEC-CCCCccc-cCHHHHHHHHHHHHHH
Confidence 4699999999999999998888776643 33 445555 7898888 8899998888877543
No 56
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=92.34 E-value=0.26 Score=43.22 Aligned_cols=57 Identities=26% Similarity=0.451 Sum_probs=45.3
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHH
Q 018541 147 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAIT 208 (354)
Q Consensus 147 ~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~ 208 (354)
...+|.|+++++.|.++|++.++..++... ..+.+.++++.|..++ .+|++..+.|.
T Consensus 173 ~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~----~~~~~~~~~~GH~~~~-~~~~~~~~~i~ 229 (230)
T PF00561_consen 173 NIKVPTLIIWGEDDPLVPPESSEQLAKLIP----NSQLVLIEGSGHFAFL-EGPDEFNEIII 229 (230)
T ss_dssp TTTSEEEEEEETTCSSSHHHHHHHHHHHST----TEEEEEETTCCSTHHH-HSHHHHHHHHH
T ss_pred ccCCCeEEEEeCCCCCCCHHHHHHHHHhcC----CCEEEECCCCChHHHh-cCHHhhhhhhc
Confidence 467799999999999999999988444333 3889999999999854 56777776654
No 57
>PRK05855 short chain dehydrogenase; Validated
Probab=91.46 E-value=0.26 Score=50.48 Aligned_cols=62 Identities=13% Similarity=0.177 Sum_probs=49.1
Q ss_pred CCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHHHHH
Q 018541 148 LGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKAA 215 (354)
Q Consensus 148 ~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~~~~ 215 (354)
..+|.|+|+++.|+++|.+..+.+++... ..+.+.++ +.|..|+ .+|+++.++|.+|+.+..
T Consensus 232 ~~~P~lii~G~~D~~v~~~~~~~~~~~~~----~~~~~~~~-~gH~~~~-e~p~~~~~~i~~fl~~~~ 293 (582)
T PRK05855 232 TDVPVQLIVPTGDPYVRPALYDDLSRWVP----RLWRREIK-AGHWLPM-SHPQVLAAAVAEFVDAVE 293 (582)
T ss_pred ccCceEEEEeCCCcccCHHHhccccccCC----cceEEEcc-CCCcchh-hChhHHHHHHHHHHHhcc
Confidence 56799999999999999988877654332 24556665 6799984 689999999999999753
No 58
>PLN02442 S-formylglutathione hydrolase
Probab=91.11 E-value=1.2 Score=42.81 Aligned_cols=62 Identities=21% Similarity=0.225 Sum_probs=51.1
Q ss_pred CCCCCEEEEecCCCCccChH-HHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHHHHHhhH
Q 018541 147 DLGTPFLIICSDNDELAPQQ-VIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKAASVY 218 (354)
Q Consensus 147 ~~~aPrLYLYSkaD~LVp~~-dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~~~~~~~ 218 (354)
....|.|++.++.|++++.. ..+.+.+.+++.|.+++.+.+++..|- |..+..|+++.+.-+
T Consensus 215 ~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~----------~~~~~~~i~~~~~~~ 277 (283)
T PLN02442 215 DVSATILIDQGEADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYDHS----------YFFIATFIDDHINHH 277 (283)
T ss_pred ccCCCEEEEECCCCccccccccHHHHHHHHHHcCCCeEEEEeCCCCcc----------HHHHHHHHHHHHHHH
Confidence 34569999999999999974 478899999999999999999999996 447777777666444
No 59
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=91.09 E-value=0.52 Score=46.22 Aligned_cols=64 Identities=22% Similarity=0.296 Sum_probs=50.2
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccC--hHhHHHHHHHHHHH
Q 018541 147 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYY--PIQYRAAITGLLEK 213 (354)
Q Consensus 147 ~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~h--PeeYw~aV~~Fw~~ 213 (354)
...+|.|+++++.|.++|++.++...+... +-+++.+.++ +.|++.+-.- +++=|.++.+|+++
T Consensus 284 ~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~--~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 284 NIKMPILNIYAERDHLVPPDASKALNDLVS--SEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred hCCCCeEEEecCCCCcCCHHHHHHHHHHcC--CCCeEEEEcC-CCCEEEEECchhHhhhhHHHHHHHHh
Confidence 346799999999999999999888777553 2356666676 7999988765 58888888888764
No 60
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=90.96 E-value=3.1 Score=41.98 Aligned_cols=60 Identities=27% Similarity=0.420 Sum_probs=47.7
Q ss_pred hHHHHHHhhcc----CCCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCccccc
Q 018541 135 RAEYWRALYNS----VDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEY 198 (354)
Q Consensus 135 r~~y~~tL~~~----~~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~ 198 (354)
..+||.+- ++ .....|.|+||+++|++++.++|.+.... ..-.|..+..+...|||-+-.
T Consensus 257 a~dYYr~a-Ss~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~---~np~v~l~~t~~GGHvGfl~~ 320 (345)
T COG0429 257 AEDYYRQA-SSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEM---LNPNVLLQLTEHGGHVGFLGG 320 (345)
T ss_pred HHHHHHhc-cccccccccccceEEEecCCCCCCChhhCCcchhc---CCCceEEEeecCCceEEeccC
Confidence 35788652 11 24567999999999999999999887665 445799999999999999883
No 61
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=90.53 E-value=0.43 Score=39.36 Aligned_cols=42 Identities=29% Similarity=0.481 Sum_probs=35.1
Q ss_pred CCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCC
Q 018541 149 GTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHI 193 (354)
Q Consensus 149 ~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV 193 (354)
..|.++++++.|++++.+.+++..++++ .+++...+++..|.
T Consensus 104 ~~pv~~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 104 RIPVLFIHGENDPLVPPEQVRRLYEALP---GPKELYIIPGAGHF 145 (145)
T ss_dssp TSEEEEEEETT-SSSHHHHHHHHHHHHC---SSEEEEEETTS-TT
T ss_pred CCcEEEEEECCCCcCCHHHHHHHHHHcC---CCcEEEEeCCCcCc
Confidence 3499999999999999999998887776 67899999999994
No 62
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=90.26 E-value=0.83 Score=46.22 Aligned_cols=65 Identities=12% Similarity=0.079 Sum_probs=48.9
Q ss_pred CCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHHHHHhh
Q 018541 148 LGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKAASV 217 (354)
Q Consensus 148 ~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~~~~~~ 217 (354)
..+|.|+||++.|.+++ ...++.. +..+..++.+.++++.|.-|+ .+|+++.++|.+|++..+..
T Consensus 324 I~vP~liI~G~~D~i~~-~~~~~~~---~~~~~~~~~~~i~~aGH~~~~-E~P~~f~~~l~~~~~~~~~~ 388 (402)
T PLN02894 324 WKVPTTFIYGRHDWMNY-EGAVEAR---KRMKVPCEIIRVPQGGHFVFL-DNPSGFHSAVLYACRKYLSP 388 (402)
T ss_pred CCCCEEEEEeCCCCCCc-HHHHHHH---HHcCCCCcEEEeCCCCCeeec-cCHHHHHHHHHHHHHHhccC
Confidence 46799999999998876 4444433 333456888999999997555 58999999999998855444
No 63
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=89.94 E-value=3.7 Score=39.46 Aligned_cols=42 Identities=31% Similarity=0.252 Sum_probs=39.4
Q ss_pred CCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCC
Q 018541 150 TPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHI 193 (354)
Q Consensus 150 aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV 193 (354)
.|.+.+.++.|.+.+ +.+.+++..++.|..|+...|++-.|.
T Consensus 246 PP~~i~~a~~D~l~~--~~~~~a~~L~~agv~~~~~~~~g~~H~ 287 (312)
T COG0657 246 PPTLIQTAEFDPLRD--EGEAYAERLRAAGVPVELRVYPGMIHG 287 (312)
T ss_pred CCEEEEecCCCcchh--HHHHHHHHHHHcCCeEEEEEeCCccee
Confidence 489999999999999 899999999999999999999999993
No 64
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=89.60 E-value=0.72 Score=43.77 Aligned_cols=63 Identities=22% Similarity=0.206 Sum_probs=48.6
Q ss_pred CCCEEEEecCCCCccChHHHHH-H-HHHHHH-CC-CceEEEEcCCCCCCcccccChHhHHHHHHHHHH
Q 018541 149 GTPFLIICSDNDELAPQQVIYN-F-ARHLLA-LG-GDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLE 212 (354)
Q Consensus 149 ~aPrLYLYSkaD~LVp~~dVE~-h-a~ear~-~G-~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~ 212 (354)
.+|.|++||..|...+ +..+. | .+.+++ .+ -.|+.+.++++.|+-+....+++.-+.|.+|++
T Consensus 207 ~~P~ll~~g~~D~~~~-~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 207 QGPVLFILSGNDLTAQ-EFADSVLGEPAWRGALEDPGIERVEIDGADHTFSDRVWREWVAARTTEWLR 273 (274)
T ss_pred CCcEEEEEcCcchhHH-HHHHHhccChhhHHHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHHHh
Confidence 5799999999999853 22222 1 144444 24 579999999999999999999999999999985
No 65
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=88.69 E-value=1.1 Score=53.69 Aligned_cols=67 Identities=19% Similarity=0.313 Sum_probs=50.6
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHHC-------C-CceEEEEcCCCCCCcccccChHhHHHHHHHHHHHHH
Q 018541 147 DLGTPFLIICSDNDELAPQQVIYNFARHLLAL-------G-GDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKAA 215 (354)
Q Consensus 147 ~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~-------G-~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~~~~ 215 (354)
...+|.|+|+++.|.+++ +..+++.+...+. + -.++.+.++++.|..|+ .+|+++.++|.+|+++.-
T Consensus 1566 ~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~l-E~Pe~f~~~I~~FL~~~~ 1640 (1655)
T PLN02980 1566 QCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHL-ENPLPVIRALRKFLTRLH 1640 (1655)
T ss_pred hCCCCEEEEEECCCCccH-HHHHHHHHHccccccccccccccceEEEEECCCCCchHH-HCHHHHHHHHHHHHHhcc
Confidence 346799999999999886 4444444433221 1 12788999999999987 889999999999999744
No 66
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=87.65 E-value=1.5 Score=37.31 Aligned_cols=60 Identities=32% Similarity=0.550 Sum_probs=43.0
Q ss_pred CCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHH
Q 018541 148 LGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLL 211 (354)
Q Consensus 148 ~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw 211 (354)
...|.|++++..|.+.|....+...+... + ..+.+.++++.|..|+-. |+++++++.+++
T Consensus 220 ~~~P~l~i~g~~d~~~~~~~~~~~~~~~~--~-~~~~~~~~~~gH~~~~~~-p~~~~~~i~~~~ 279 (282)
T COG0596 220 ITVPTLIIHGEDDPVVPAELARRLAAALP--N-DARLVVIPGAGHFPHLEA-PEAFAAALLAFL 279 (282)
T ss_pred CCCCeEEEecCCCCcCCHHHHHHHHhhCC--C-CceEEEeCCCCCcchhhc-HHHHHHHHHHHH
Confidence 44699999999997777766333322222 2 578888999999998754 668888887743
No 67
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=87.09 E-value=1.7 Score=39.54 Aligned_cols=64 Identities=23% Similarity=0.355 Sum_probs=53.9
Q ss_pred CCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChH--hHHHHHHHHHHHHH
Q 018541 150 TPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPI--QYRAAITGLLEKAA 215 (354)
Q Consensus 150 aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPe--eYw~aV~~Fw~~~~ 215 (354)
.|-|++.+..|.+||....++....++.. ..+....++..|.-=....+. +|+..+.+|+++.+
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~~~--~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAARER--PKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERHL 298 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhccC--CceEEEecCCccccccCccHHHHHHHHHHHHHHHHhc
Confidence 59999999999999999999999999876 667777788887766655564 89999999998754
No 68
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=86.97 E-value=1.4 Score=41.72 Aligned_cols=47 Identities=23% Similarity=0.285 Sum_probs=43.2
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCC
Q 018541 147 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHI 193 (354)
Q Consensus 147 ~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV 193 (354)
...+|.|.+|++.|..+|.++++...++.++.|.+++.+.|.+..|.
T Consensus 156 ~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~ 202 (236)
T COG0412 156 KIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHG 202 (236)
T ss_pred cccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccc
Confidence 45679999999999999999999999999999999999999996664
No 69
>PRK11071 esterase YqiA; Provisional
Probab=86.51 E-value=1.7 Score=39.38 Aligned_cols=55 Identities=13% Similarity=0.067 Sum_probs=43.2
Q ss_pred CCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHH
Q 018541 148 LGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLE 212 (354)
Q Consensus 148 ~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~ 212 (354)
...|.+.+.+++|++||++.-.+..+.+ +....+|+.|. -.+.++|+..+.+|++
T Consensus 135 ~~~~v~iihg~~De~V~~~~a~~~~~~~-------~~~~~~ggdH~---f~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 135 SPDLIWLLQQTGDEVLDYRQAVAYYAAC-------RQTVEEGGNHA---FVGFERYFNQIVDFLG 189 (190)
T ss_pred ChhhEEEEEeCCCCcCCHHHHHHHHHhc-------ceEEECCCCcc---hhhHHHhHHHHHHHhc
Confidence 4457788999999999999999988843 23455666654 4777999999999975
No 70
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=86.12 E-value=4.3 Score=40.59 Aligned_cols=64 Identities=19% Similarity=0.281 Sum_probs=52.4
Q ss_pred CCCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHHHH
Q 018541 146 VDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKA 214 (354)
Q Consensus 146 ~~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~~~ 214 (354)
.+...|.||+....+.-++-+....+..-... |+.+..+++.|.=|+ ..|++...+|.+|++..
T Consensus 250 ~~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp~----~e~~~ld~aGHwVh~-E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 250 GPYTGPVLFIKGLQSKFVPDEHYPRMEKIFPN----VEVHELDEAGHWVHL-EKPEEFIESISEFLEEP 313 (315)
T ss_pred cccccceeEEecCCCCCcChhHHHHHHHhccc----hheeecccCCceeec-CCHHHHHHHHHHHhccc
Confidence 45667999999999999998765555554443 888899999999887 57999999999998764
No 71
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=85.83 E-value=3.3 Score=37.51 Aligned_cols=29 Identities=17% Similarity=0.216 Sum_probs=25.5
Q ss_pred CCE-EEEecCCCCccChHHHHHHHHHHHHC
Q 018541 150 TPF-LIICSDNDELAPQQVIYNFARHLLAL 178 (354)
Q Consensus 150 aPr-LYLYSkaD~LVp~~dVE~ha~ear~~ 178 (354)
.|. +.+.++.|++||.+..++.++.+++.
T Consensus 168 ~p~~~i~hG~~D~vVp~~~~~~~~~~l~~~ 197 (212)
T TIGR01840 168 TPIMSVVHGDADYTVLPGNADEIRDAMLKV 197 (212)
T ss_pred CCeEEEEEcCCCceeCcchHHHHHHHHHHh
Confidence 354 57889999999999999999999886
No 72
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=85.30 E-value=1.6 Score=41.77 Aligned_cols=56 Identities=23% Similarity=0.336 Sum_probs=41.1
Q ss_pred CCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHH
Q 018541 149 GTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLE 212 (354)
Q Consensus 149 ~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~ 212 (354)
.+|.|.+.++.|.++|.+..+++++... +.+.+.++++.|.. .+|+.. ++|.++++
T Consensus 248 ~~P~lii~g~~D~~~p~~~~~~~~~~~~----~~~~~~~~~~gH~~---~~~~~~-~~i~~~~~ 303 (306)
T TIGR01249 248 NIPTYIVHGRYDLCCPLQSAWALHKAFP----EAELKVTNNAGHSA---FDPNNL-AALVHALE 303 (306)
T ss_pred CCCeEEEecCCCCCCCHHHHHHHHHhCC----CCEEEEECCCCCCC---CChHHH-HHHHHHHH
Confidence 3699999999999999998887776643 35666777766554 577777 55555544
No 73
>PRK13604 luxD acyl transferase; Provisional
Probab=83.53 E-value=1.8 Score=42.97 Aligned_cols=91 Identities=20% Similarity=0.222 Sum_probs=61.7
Q ss_pred CCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHHHHHhhHHHHHhhhcc
Q 018541 148 LGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKAASVYSQRIRQLGE 227 (354)
Q Consensus 148 ~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~~~~~~~~~~~~~~~~ 227 (354)
...|-|+|.+++|++||.+.++++.+.++. .+.+.+.++++-|.=+ .++ -.+++|.+.....- ++|...
T Consensus 201 l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s--~~kkl~~i~Ga~H~l~--~~~----~~~~~~~~~~~~~~---~~~~~~ 269 (307)
T PRK13604 201 LDIPFIAFTANNDSWVKQSEVIDLLDSIRS--EQCKLYSLIGSSHDLG--ENL----VVLRNFYQSVTKAA---IALDNG 269 (307)
T ss_pred cCCCEEEEEcCCCCccCHHHHHHHHHHhcc--CCcEEEEeCCCccccC--cch----HHHHHHHHHHHHHH---heecCC
Confidence 346999999999999999999999998754 4788999999998632 222 34556655443322 344444
Q ss_pred ccCCCCccchhhhh-hhhhhhhhhcc
Q 018541 228 ISGMEGTHDEISEL-ICDLQNVAVNS 252 (354)
Q Consensus 228 ~~~~~g~~~~~~~~-~~~~~~~~~~~ 252 (354)
..+ ..+||.|| +-+|--+++|-
T Consensus 270 ~~~---~~~~~~~~~~~~~~~~~~~~ 292 (307)
T PRK13604 270 SLD---LDVDIIEPSFEDLTSATVKE 292 (307)
T ss_pred ccc---ccccccCCCHHHHHHHHHHH
Confidence 433 45677776 35565555553
No 74
>PRK10985 putative hydrolase; Provisional
Probab=83.03 E-value=2.2 Score=41.37 Aligned_cols=62 Identities=23% Similarity=0.246 Sum_probs=44.1
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccC--hHhHH--HHHHHHHH
Q 018541 147 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYY--PIQYR--AAITGLLE 212 (354)
Q Consensus 147 ~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~h--PeeYw--~aV~~Fw~ 212 (354)
...+|.|+|.++.|++++.+.++...+ .--+++.+.+++..|++++..- +.++| +.+.+|++
T Consensus 253 ~i~~P~lii~g~~D~~~~~~~~~~~~~----~~~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~ 318 (324)
T PRK10985 253 QIRKPTLIIHAKDDPFMTHEVIPKPES----LPPNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLT 318 (324)
T ss_pred CCCCCEEEEecCCCCCCChhhChHHHH----hCCCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHH
Confidence 456799999999999999887776432 2235788899999999999752 23344 23555554
No 75
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=80.12 E-value=7.4 Score=43.22 Aligned_cols=70 Identities=16% Similarity=0.200 Sum_probs=56.6
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHHHHHhh
Q 018541 147 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKAASV 217 (354)
Q Consensus 147 ~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~~~~~~ 217 (354)
...+|.|++.+..|..++.+...+..+.++++|.+++....+ ..|+.-....+.+|.+.+.+|+...+..
T Consensus 453 kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~-g~H~~~~~~~~~d~~e~~~~Wfd~~LkG 522 (767)
T PRK05371 453 KIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQ-GGHVYPNNWQSIDFRDTMNAWFTHKLLG 522 (767)
T ss_pred CCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeC-CCccCCCchhHHHHHHHHHHHHHhcccc
Confidence 566899999999999999999999999999999988886654 4676544455678888888888766553
No 76
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=80.05 E-value=6.3 Score=37.70 Aligned_cols=71 Identities=18% Similarity=0.200 Sum_probs=55.3
Q ss_pred HHhhccCCCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHHHHHhhH
Q 018541 140 RALYNSVDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKAASVY 218 (354)
Q Consensus 140 ~tL~~~~~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~~~~~~~ 218 (354)
+..+...++.+|.|-+|++.|.++|.+..+.+++..++. .+..... ||+.=....|.+.+.+|+.....-.
T Consensus 154 ~~~~~~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a-----~vl~Hpg---gH~VP~~~~~~~~i~~fi~~~~~~~ 224 (230)
T KOG2551|consen 154 DESAYKRPLSTPSLHIFGETDTIVPSERSEQLAESFKDA-----TVLEHPG---GHIVPNKAKYKEKIADFIQSFLQEE 224 (230)
T ss_pred hhhhhccCCCCCeeEEecccceeecchHHHHHHHhcCCC-----eEEecCC---CccCCCchHHHHHHHHHHHHHHHhh
Confidence 333444578889999999999999999999999998765 3444433 5777778899999999988766544
No 77
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=78.70 E-value=3.8 Score=43.63 Aligned_cols=50 Identities=34% Similarity=0.392 Sum_probs=40.6
Q ss_pred CCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChH
Q 018541 148 LGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPI 201 (354)
Q Consensus 148 ~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPe 201 (354)
..+|.|++.++.|.++|++.++...+. .+ ..+...++++.|+.|+-.-|.
T Consensus 414 I~vPvLvV~G~~D~IvP~~sa~~l~~~---i~-~~~~~vL~~sGHi~~ienPp~ 463 (532)
T TIGR01838 414 VKVPVYIIATREDHIAPWQSAYRGAAL---LG-GPKTFVLGESGHIAGVVNPPS 463 (532)
T ss_pred CCCCEEEEeeCCCCcCCHHHHHHHHHH---CC-CCEEEEECCCCCchHhhCCCC
Confidence 567999999999999999988876543 34 456678999999999887664
No 78
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=78.31 E-value=31 Score=35.79 Aligned_cols=84 Identities=19% Similarity=0.243 Sum_probs=57.4
Q ss_pred hHHHHHHh---hccCCCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCccccc---ChHhHHHH-H
Q 018541 135 RAEYWRAL---YNSVDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEY---YPIQYRAA-I 207 (354)
Q Consensus 135 r~~y~~tL---~~~~~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~---hPeeYw~a-V 207 (354)
..+||..- ..-.....|-|+|.|.+|+++|.+.|- .+..++.= .|-.+.=.-..|+|=+.. .+..|... +
T Consensus 305 ~deYY~~aSs~~~v~~I~VP~L~ina~DDPv~p~~~ip--~~~~~~np-~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l 381 (409)
T KOG1838|consen 305 VDEYYKKASSSNYVDKIKVPLLCINAADDPVVPEEAIP--IDDIKSNP-NVLLVITSHGGHLGFLEGLWPSARTWMDKLL 381 (409)
T ss_pred HHHHHhhcchhhhcccccccEEEEecCCCCCCCcccCC--HHHHhcCC-cEEEEEeCCCceeeeeccCCCccchhHHHHH
Confidence 35777542 111256779999999999999987553 33333332 566666666777777777 67788888 8
Q ss_pred HHHHHHHHhhHHHH
Q 018541 208 TGLLEKAASVYSQR 221 (354)
Q Consensus 208 ~~Fw~~~~~~~~~~ 221 (354)
.+||.........+
T Consensus 382 ~ef~~~~~~~~~~~ 395 (409)
T KOG1838|consen 382 VEFLGNAIFQDEVG 395 (409)
T ss_pred HHHHHHHHhhhccc
Confidence 89998877665433
No 79
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=76.19 E-value=5 Score=38.55 Aligned_cols=46 Identities=20% Similarity=0.335 Sum_probs=36.7
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCce--EEEEcCCCCCC
Q 018541 147 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDV--KLVKLNGSPHI 193 (354)
Q Consensus 147 ~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V--~~v~Fe~SpHV 193 (354)
...+|.|+|+++.|+++|.++|.+.-+..++. -.| +.+.|++-.|-
T Consensus 162 ~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~-~~~~~~v~~f~g~~HG 209 (242)
T KOG3043|consen 162 NVKAPILFLFAELDEDVPPKDVKAWEEKLKEN-PAVGSQVKTFSGVGHG 209 (242)
T ss_pred cCCCCEEEEeecccccCCHHHHHHHHHHHhcC-cccceeEEEcCCccch
Confidence 56689999999999999999998887777654 333 46778887773
No 80
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=75.77 E-value=7.3 Score=32.00 Aligned_cols=59 Identities=22% Similarity=0.286 Sum_probs=47.2
Q ss_pred CCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHHH
Q 018541 150 TPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEK 213 (354)
Q Consensus 150 aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~~ 213 (354)
.|.|+|=++.|+++|++..++.++.... -+.+.+++..|..+....+-- .++|.+|+.+
T Consensus 35 ~piL~l~~~~Dp~TP~~~a~~~~~~l~~----s~lvt~~g~gHg~~~~~s~C~-~~~v~~yl~~ 93 (103)
T PF08386_consen 35 PPILVLGGTHDPVTPYEGARAMAARLPG----SRLVTVDGAGHGVYAGGSPCV-DKAVDDYLLD 93 (103)
T ss_pred CCEEEEecCcCCCCcHHHHHHHHHHCCC----ceEEEEeccCcceecCCChHH-HHHHHHHHHc
Confidence 6999999999999999998888877653 478899999999997555554 3666666653
No 81
>PRK10115 protease 2; Provisional
Probab=75.08 E-value=8.8 Score=41.94 Aligned_cols=59 Identities=17% Similarity=0.064 Sum_probs=46.2
Q ss_pred CCCCCEE-EEecCCCCccChHHHHHHHHHHHHCCCceEEEEc---CCCCCCcccccChHhHHHHH
Q 018541 147 DLGTPFL-IICSDNDELAPQQVIYNFARHLLALGGDVKLVKL---NGSPHIGHYEYYPIQYRAAI 207 (354)
Q Consensus 147 ~~~aPrL-YLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~F---e~SpHV~HmR~hPeeYw~aV 207 (354)
....|.| ++.|.+|+-||+..-+++++++|++|.+++.+.+ .++.|- -.....++++..
T Consensus 603 ~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg--~~~~r~~~~~~~ 665 (686)
T PRK10115 603 AQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHG--GKSGRFKSYEGV 665 (686)
T ss_pred ccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCC--CCcCHHHHHHHH
Confidence 4456855 5599999999999999999999999999999999 666665 344555555543
No 82
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=74.66 E-value=4.3 Score=38.80 Aligned_cols=63 Identities=17% Similarity=0.259 Sum_probs=50.7
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHHHH
Q 018541 147 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKA 214 (354)
Q Consensus 147 ~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~~~ 214 (354)
...+|.|++.++.|++|+-..|. ++.+.++ --+.+.+....|==|+| +++++-+.|.+|+++.
T Consensus 214 ~vkcPtli~hG~kDp~~~~~hv~-fi~~~~~---~a~~~~~peGkHn~hLr-ya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 214 QVKCPTLIMHGGKDPFCGDPHVC-FIPVLKS---LAKVEIHPEGKHNFHLR-YAKEFNKLVLDFLKST 276 (277)
T ss_pred cccCCeeEeeCCcCCCCCCCCcc-chhhhcc---cceEEEccCCCcceeee-chHHHHHHHHHHHhcc
Confidence 46789999999999999987664 4444433 24567899999999987 7999999999999863
No 83
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=74.48 E-value=5 Score=37.11 Aligned_cols=46 Identities=24% Similarity=0.422 Sum_probs=30.3
Q ss_pred CCCCEEEEecCCCCccChHHHHHHHHH-HHHCCCc--eEEEEcCCCCCC
Q 018541 148 LGTPFLIICSDNDELAPQQVIYNFARH-LLALGGD--VKLVKLNGSPHI 193 (354)
Q Consensus 148 ~~aPrLYLYSkaD~LVp~~dVE~ha~e-ar~~G~~--V~~v~Fe~SpHV 193 (354)
..+|-|++.|++|.+.|....-+.+.+ +++.|.+ ++.+.+++..|.
T Consensus 114 i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~ 162 (213)
T PF08840_consen 114 IKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGHL 162 (213)
T ss_dssp --SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S-
T ss_pred cCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCce
Confidence 567999999999999998888776655 4566765 888888877665
No 84
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=72.53 E-value=8.1 Score=37.38 Aligned_cols=66 Identities=21% Similarity=0.298 Sum_probs=50.5
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHHHHHh
Q 018541 147 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKAAS 216 (354)
Q Consensus 147 ~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~~~~~ 216 (354)
..+.|.|||=+.+|++||+....+..+..-+. ..+..-|++..|-.---. +-||+++.+|+.+...
T Consensus 219 ~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~--~Krl~eFP~gtHNDT~i~--dGYfq~i~dFlaE~~~ 284 (300)
T KOG4391|consen 219 QCRMPFLFISGLKDELVPPVMMRQLYELCPSR--TKRLAEFPDGTHNDTWIC--DGYFQAIEDFLAEVVK 284 (300)
T ss_pred cccCceEEeecCccccCCcHHHHHHHHhCchh--hhhheeCCCCccCceEEe--ccHHHHHHHHHHHhcc
Confidence 45669999999999999999887777665332 345667888888655443 6799999999987654
No 85
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=71.34 E-value=0.94 Score=41.99 Aligned_cols=157 Identities=16% Similarity=0.081 Sum_probs=94.2
Q ss_pred CEEEEecCCC-CccChHHHHHHHHHHHHCC--Cc-eEEEEcCCCCCCcccccChHhHHHHHHHHHH-------HHHhhHH
Q 018541 151 PFLIICSDND-ELAPQQVIYNFARHLLALG--GD-VKLVKLNGSPHIGHYEYYPIQYRAAITGLLE-------KAASVYS 219 (354)
Q Consensus 151 PrLYLYSkaD-~LVp~~dVE~ha~ear~~G--~~-V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~-------~~~~~~~ 219 (354)
+++++.+=.. -..-+..+.+..+...+-+ .+ +....|+.+|+..++ ...-+++.+...... .......
T Consensus 67 ~~il~H~FSnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (240)
T PF05705_consen 67 PPILFHSFSNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTY-SSSARAFSAALPKSSPRWFVPLWPLLQFL 145 (240)
T ss_pred CCEEEEEEECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCcccc-ccHHHHHHHHcCccchhhHHHHHHHHHHH
Confidence 3666655443 2333333333333333212 23 888999999999999 666677666533221 1111111
Q ss_pred HHHhhhccccCCCCccchhhhhhhhhhhhhhcccccccccccCCC--CcccccCccccc--cCCCCCcccccccCcccC-
Q 018541 220 QRIRQLGEISGMEGTHDEISELICDLQNVAVNSNQSLRRVAVEPS--DHFFLPSSTELH--SQESGSLQDERNSRSVYL- 294 (354)
Q Consensus 220 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~- 294 (354)
... .-+..-++..++.....++.++..+..|. -+.|+-|..+-. .++++...+|+|+.-..+
T Consensus 146 ~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~ 212 (240)
T PF05705_consen 146 LRL-------------SIISYFIFGYPDVQEYYRRALNDFANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVR 212 (240)
T ss_pred HHH-------------HHHHHHHhcCCcHHHHHHHHHhhhhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEE
Confidence 111 11223344444444455555666666664 488999988866 788888888877744333
Q ss_pred -CCCCCCccchhhhhhhcccccCCCcCc
Q 018541 295 -PTPSISAHSVLGEFLFDVCVPKNVEGW 321 (354)
Q Consensus 295 -~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (354)
-.=.-+||-...+.-.|.|+.+..|.|
T Consensus 213 ~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 213 AEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred EecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 234458999999999999999998887
No 86
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=71.08 E-value=4.8 Score=41.85 Aligned_cols=51 Identities=31% Similarity=0.418 Sum_probs=42.2
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChH
Q 018541 147 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPI 201 (354)
Q Consensus 147 ~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPe 201 (354)
...+|.+.+++++|.|+||+.|-.-+ +-.|.+|+.+.. +|.|.+-+-.||.
T Consensus 328 ~It~pvy~~a~~~DhI~P~~Sv~~g~---~l~~g~~~f~l~-~sGHIa~vVN~p~ 378 (445)
T COG3243 328 DITCPVYNLAAEEDHIAPWSSVYLGA---RLLGGEVTFVLS-RSGHIAGVVNPPG 378 (445)
T ss_pred hcccceEEEeecccccCCHHHHHHHH---HhcCCceEEEEe-cCceEEEEeCCcc
Confidence 46789999999999999999886654 445558887777 6999999999884
No 87
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=70.70 E-value=20 Score=35.48 Aligned_cols=69 Identities=16% Similarity=0.245 Sum_probs=46.0
Q ss_pred HHHHHhhccCCCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhH-HHHHHHHHHH
Q 018541 137 EYWRALYNSVDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQY-RAAITGLLEK 213 (354)
Q Consensus 137 ~y~~tL~~~~~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeY-w~aV~~Fw~~ 213 (354)
.|+|..+-....++|.|+-.+-.|++||+..+-+..+.... +.+.+.++...|= .+.++ ++...+|+++
T Consensus 250 ~Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~---~K~l~vyp~~~He-----~~~~~~~~~~~~~l~~ 319 (320)
T PF05448_consen 250 SYFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPG---PKELVVYPEYGHE-----YGPEFQEDKQLNFLKE 319 (320)
T ss_dssp HTT-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--S---SEEEEEETT--SS-----TTHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCC---CeeEEeccCcCCC-----chhhHHHHHHHHHHhc
Confidence 45555443445678999999999999999999998888754 6899999988873 34444 7777788765
No 88
>PRK07868 acyl-CoA synthetase; Validated
Probab=65.85 E-value=17 Score=41.24 Aligned_cols=64 Identities=14% Similarity=0.191 Sum_probs=50.9
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEE-EEcCCCCCCcccccC--hHhHHHHHHHHHHHH
Q 018541 147 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKL-VKLNGSPHIGHYEYY--PIQYRAAITGLLEKA 214 (354)
Q Consensus 147 ~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~-v~Fe~SpHV~HmR~h--PeeYw~aV~~Fw~~~ 214 (354)
...+|.|+++++.|.++|++.++...+..- ..+. +.+++..|.+++-.- |++=|-.+.+++++.
T Consensus 295 ~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~----~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~ 361 (994)
T PRK07868 295 DITCPVLAFVGEVDDIGQPASVRGIRRAAP----NAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWL 361 (994)
T ss_pred hCCCCEEEEEeCCCCCCCHHHHHHHHHhCC----CCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHh
Confidence 455799999999999999999988866442 2333 567888899888764 899999999999863
No 89
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=64.76 E-value=33 Score=32.41 Aligned_cols=29 Identities=14% Similarity=0.181 Sum_probs=26.6
Q ss_pred CCEEEEecCCCCccChHHHHHHHHHHHHC
Q 018541 150 TPFLIICSDNDELAPQQVIYNFARHLLAL 178 (354)
Q Consensus 150 aPrLYLYSkaD~LVp~~dVE~ha~ear~~ 178 (354)
.|++.+.+.+|..|...--++.++.|...
T Consensus 170 ~P~~v~hG~~D~tV~~~n~~~~~~q~~~~ 198 (220)
T PF10503_consen 170 YPRIVFHGTADTTVNPQNADQLVAQWLNV 198 (220)
T ss_pred CCEEEEecCCCCccCcchHHHHHHHHHHc
Confidence 49999999999999999999999999864
No 90
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=64.54 E-value=26 Score=38.98 Aligned_cols=68 Identities=18% Similarity=0.122 Sum_probs=53.0
Q ss_pred CCCE-EEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHHHHHh
Q 018541 149 GTPF-LIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKAAS 216 (354)
Q Consensus 149 ~aPr-LYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~~~~~ 216 (354)
..|. |++.+++|+-|+.+.=-.+++.++.+|++.+...|+++.|-==.+.--..+...+..|+..|..
T Consensus 681 ~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~~~~ 749 (755)
T KOG2100|consen 681 KTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLDRFLRDCFG 749 (755)
T ss_pred ccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHHHHHHHHcC
Confidence 3466 9999999999999999999999999999999999999988533333224455666777765543
No 91
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=64.47 E-value=15 Score=36.82 Aligned_cols=64 Identities=19% Similarity=0.144 Sum_probs=51.5
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccC---hHhHHHHHHHHHH
Q 018541 147 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYY---PIQYRAAITGLLE 212 (354)
Q Consensus 147 ~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~h---PeeYw~aV~~Fw~ 212 (354)
....|-|.+.+++|.+++.+..+++.+.|.++ |.+.+.++|--|.=|.-.- -+.+.+-|.+.++
T Consensus 244 ~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~--DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~ 310 (313)
T KOG1455|consen 244 EVTVPFLILHGTDDKVTDPKVSKELYEKASSS--DKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLD 310 (313)
T ss_pred cccccEEEEecCCCcccCcHHHHHHHHhccCC--CCceeccccHHHHhhcCCCchhHHHHHHHHHHHHH
Confidence 45669999999999999999999999999886 8899999999999886433 3445555555544
No 92
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=61.97 E-value=9.6 Score=34.27 Aligned_cols=40 Identities=33% Similarity=0.433 Sum_probs=28.3
Q ss_pred CEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCccccc
Q 018541 151 PFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEY 198 (354)
Q Consensus 151 PrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~ 198 (354)
|.+.+.|++|+.+|++.-+++++.+.. +.+ ..++.||+..
T Consensus 116 ~~~viaS~nDp~vp~~~a~~~A~~l~a-----~~~---~~~~~GHf~~ 155 (171)
T PF06821_consen 116 PSIVIASDNDPYVPFERAQRLAQRLGA-----ELI---ILGGGGHFNA 155 (171)
T ss_dssp CEEEEEETTBSSS-HHHHHHHHHHHT------EEE---EETS-TTSSG
T ss_pred CeEEEEcCCCCccCHHHHHHHHHHcCC-----CeE---ECCCCCCccc
Confidence 669999999999999988888888754 233 3466666654
No 93
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=56.21 E-value=22 Score=38.30 Aligned_cols=51 Identities=25% Similarity=0.333 Sum_probs=41.2
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChH
Q 018541 147 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPI 201 (354)
Q Consensus 147 ~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPe 201 (354)
...+|.+.+.+++|.|+||+.+....+.. |-+++.+.. .|.|++=+...|.
T Consensus 439 ~I~~Pvl~va~~~DHIvPw~s~~~~~~l~---gs~~~fvl~-~gGHIggivnpP~ 489 (560)
T TIGR01839 439 KVKCDSFSVAGTNDHITPWDAVYRSALLL---GGKRRFVLS-NSGHIQSILNPPG 489 (560)
T ss_pred cCCCCeEEEecCcCCcCCHHHHHHHHHHc---CCCeEEEec-CCCccccccCCCC
Confidence 45679999999999999999998886644 447777666 6889988877664
No 94
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=55.90 E-value=33 Score=34.56 Aligned_cols=48 Identities=23% Similarity=0.218 Sum_probs=42.3
Q ss_pred CEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccCh
Q 018541 151 PFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYP 200 (354)
Q Consensus 151 PrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hP 200 (354)
|.|++-.+.|.|.+ +-...+++.++.|++|+...+++-.|+.|....-
T Consensus 270 ~tlv~~ag~D~L~D--~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~ 317 (336)
T KOG1515|consen 270 PTLVVVAGYDVLRD--EGLAYAEKLKKAGVEVTLIHYEDGFHGFHILDPS 317 (336)
T ss_pred ceEEEEeCchhhhh--hhHHHHHHHHHcCCeEEEEEECCCeeEEEecCCc
Confidence 79999999999984 4567888889999999988999999999998765
No 95
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=53.41 E-value=26 Score=32.52 Aligned_cols=44 Identities=20% Similarity=0.172 Sum_probs=36.4
Q ss_pred CCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccC
Q 018541 148 LGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYY 199 (354)
Q Consensus 148 ~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~h 199 (354)
..-|.+.+-|++|+.++++.-+..++.|-.. |-+-.|.||+-.+
T Consensus 116 lpfps~vvaSrnDp~~~~~~a~~~a~~wgs~--------lv~~g~~GHiN~~ 159 (181)
T COG3545 116 LPFPSVVVASRNDPYVSYEHAEDLANAWGSA--------LVDVGEGGHINAE 159 (181)
T ss_pred CCCceeEEEecCCCCCCHHHHHHHHHhccHh--------heecccccccchh
Confidence 3449999999999999999999999999764 4466788887665
No 96
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=52.80 E-value=1.8e+02 Score=29.90 Aligned_cols=40 Identities=13% Similarity=0.189 Sum_probs=31.5
Q ss_pred CEEEEec-CCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCC
Q 018541 151 PFLIICS-DNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPH 192 (354)
Q Consensus 151 PrLYLYS-kaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpH 192 (354)
.++||.. +.|..+ .+.++++.+..+++|++|+...|++ .|
T Consensus 350 lr~~i~~G~~E~~~-~~~~~~l~~~L~~~G~~~~~~~~~G-GH 390 (411)
T PRK10439 350 LRIVLEAGRREPMI-MRANQALYAQLHPAGHSVFWRQVDG-GH 390 (411)
T ss_pred ceEEEeCCCCCchH-HHHHHHHHHHHHHCCCcEEEEECCC-Cc
Confidence 5788864 445333 6788999999999999999999987 35
No 97
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=51.74 E-value=33 Score=35.49 Aligned_cols=64 Identities=11% Similarity=0.144 Sum_probs=52.0
Q ss_pred CCEEEEecCCCCccChHHHHHHHHHHHHCCC-ceEEEEcCCCCCCccccc--ChHhHHHHHHHHHHH
Q 018541 150 TPFLIICSDNDELAPQQVIYNFARHLLALGG-DVKLVKLNGSPHIGHYEY--YPIQYRAAITGLLEK 213 (354)
Q Consensus 150 aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~-~V~~v~Fe~SpHV~HmR~--hPeeYw~aV~~Fw~~ 213 (354)
+|-|-+.++.|.|+||+..+...+.....+- +.+.....+..|+|-+-. -+++=|-.|.+|+.+
T Consensus 339 ~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 339 VALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred cceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 7999999999999999999998887654442 456677778889988865 477888888888864
No 98
>COG4099 Predicted peptidase [General function prediction only]
Probab=46.84 E-value=50 Score=33.44 Aligned_cols=50 Identities=16% Similarity=0.139 Sum_probs=37.1
Q ss_pred CCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccC
Q 018541 150 TPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYY 199 (354)
Q Consensus 150 aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~h 199 (354)
+|--++.|.+|+++|-+.---..++.+..+.+|+..-|....-+-|=-.|
T Consensus 316 ~piWvfhs~dDkv~Pv~nSrv~y~~lk~~~~kv~Ytaf~~g~~~~eG~d~ 365 (387)
T COG4099 316 APIWVFHSSDDKVIPVSNSRVLYERLKALDRKVNYTAFLEGTTVLEGVDH 365 (387)
T ss_pred CceEEEEecCCCccccCcceeehHHHHhhccccchhhhhhccccccccCC
Confidence 46669999999999998877777788877777877777755444444443
No 99
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=45.71 E-value=1.1e+02 Score=30.76 Aligned_cols=61 Identities=25% Similarity=0.320 Sum_probs=43.0
Q ss_pred CCCCEEEEecCCCCccChHHHHHHHHHHHHCC-CceEEEEcCCCCCCccccc--ChHhHHHHHHHHHHHH
Q 018541 148 LGTPFLIICSDNDELAPQQVIYNFARHLLALG-GDVKLVKLNGSPHIGHYEY--YPIQYRAAITGLLEKA 214 (354)
Q Consensus 148 ~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G-~~V~~v~Fe~SpHV~HmR~--hPeeYw~aV~~Fw~~~ 214 (354)
...|.+++|+..|.+.+.. .|.+..|+.= ..-+.+.-+ |+||+-. +|++-.+++.+|+++-
T Consensus 257 i~iPv~fi~G~~D~v~~~p---~~~~~~rk~vp~l~~~vv~~---~~gH~vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 257 ITIPVLFIWGDLDPVLPYP---IFGELYRKDVPRLTERVVIE---GIGHFVQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred cccceEEEEecCcccccch---hHHHHHHHhhccccceEEec---CCcccccccCHHHHHHHHHHHHHhh
Confidence 4559999999999999988 4444444421 111445554 6666655 5999999999999864
No 100
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=43.31 E-value=33 Score=32.43 Aligned_cols=59 Identities=24% Similarity=0.317 Sum_probs=44.4
Q ss_pred CCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHHH
Q 018541 150 TPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEK 213 (354)
Q Consensus 150 aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~~ 213 (354)
.|-+-.+++.|++||.+--++..+..++.|..++.+-|++-.| .- -|+|- ..+..|+++
T Consensus 145 ~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h---~~-~~~e~-~~~~~~~~~ 203 (206)
T KOG2112|consen 145 TPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGH---ST-SPQEL-DDLKSWIKT 203 (206)
T ss_pred chhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCccc---cc-cHHHH-HHHHHHHHH
Confidence 4788999999999999999999999999999866666655544 33 34443 555666554
No 101
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=43.09 E-value=40 Score=34.94 Aligned_cols=38 Identities=26% Similarity=0.246 Sum_probs=34.5
Q ss_pred CCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEc
Q 018541 150 TPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKL 187 (354)
Q Consensus 150 aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~F 187 (354)
+--+-.+|..|+++|.++=+++++..+++|++|+....
T Consensus 294 ~~yvsYHs~~D~~~p~~~K~~l~~~l~~lgfda~l~lI 331 (403)
T PF11144_consen 294 IIYVSYHSIKDDLAPAEDKEELYEILKNLGFDATLHLI 331 (403)
T ss_pred eEEEEEeccCCCCCCHHHHHHHHHHHHHcCCCeEEEEe
Confidence 35566789999999999999999999999999999887
No 102
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=42.91 E-value=29 Score=35.26 Aligned_cols=57 Identities=19% Similarity=0.375 Sum_probs=47.7
Q ss_pred CEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHH
Q 018541 151 PFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLE 212 (354)
Q Consensus 151 PrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~ 212 (354)
...+++.++|.-||-..|.++.+.| -|..|+. -++.||+-|-.|.+.|.++|.+.++
T Consensus 291 ~ii~V~A~~DaYVPr~~v~~Lq~~W--PGsEvR~---l~gGHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 291 AIIFVAAKNDAYVPRHGVLSLQEIW--PGSEVRY---LPGGHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred cEEEEEecCceEechhhcchHHHhC--CCCeEEE---ecCCcEEEeeechHHHHHHHHHHhh
Confidence 6778899999999999999777776 3556555 3669999999999999999988765
No 103
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=42.18 E-value=1.5e+02 Score=28.81 Aligned_cols=60 Identities=18% Similarity=0.264 Sum_probs=43.9
Q ss_pred CCCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccc--cChHhHHHHHHHHHH
Q 018541 146 VDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYE--YYPIQYRAAITGLLE 212 (354)
Q Consensus 146 ~~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR--~hPeeYw~aV~~Fw~ 212 (354)
.+..+|...+.++.|.+|.++++.+-.++++. +.+.+.|+| +|+- +..++-.+.+.+.|.
T Consensus 173 ~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~---~f~l~~fdG----gHFfl~~~~~~v~~~i~~~l~ 234 (244)
T COG3208 173 APLACPIHAFGGEKDHEVSRDELGAWREHTKG---DFTLRVFDG----GHFFLNQQREEVLARLEQHLA 234 (244)
T ss_pred CCcCcceEEeccCcchhccHHHHHHHHHhhcC---CceEEEecC----cceehhhhHHHHHHHHHHHhh
Confidence 57888999999999999999877766555554 788999987 3554 445555555555553
No 104
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=41.67 E-value=14 Score=36.76 Aligned_cols=31 Identities=23% Similarity=0.307 Sum_probs=8.5
Q ss_pred CCCCEEEEecCCCCccC-hHHHHHHHHHHHHC
Q 018541 148 LGTPFLIICSDNDELAP-QQVIYNFARHLLAL 178 (354)
Q Consensus 148 ~~aPrLYLYSkaD~LVp-~~dVE~ha~ear~~ 178 (354)
...|-|+|||.+|+-|| |-|.++++++|++.
T Consensus 231 v~~plLvl~Sg~DEyvP~~vdk~~Ll~rw~~a 262 (303)
T PF08538_consen 231 VSKPLLVLYSGKDEYVPPWVDKEALLERWKAA 262 (303)
T ss_dssp --S-EEEEEE--TT------------------
T ss_pred CCCceEEEecCCCceecccccccccccccccc
Confidence 44599999999999985 57889999999864
No 105
>COG3040 Blc Bacterial lipocalin [Cell envelope biogenesis, outer membrane]
Probab=40.97 E-value=46 Score=30.67 Aligned_cols=38 Identities=18% Similarity=0.160 Sum_probs=32.9
Q ss_pred CEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCC
Q 018541 151 PFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNG 189 (354)
Q Consensus 151 PrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~ 189 (354)
..|+|||++=++ .-+..+++.+++|++|++|....|..
T Consensus 133 ~ylWlLsRtP~~-s~~~~~~ml~~ak~~Gfdv~~li~~~ 170 (174)
T COG3040 133 EYLWLLSRTPTL-SQETLKRMLEIAKRRGFDVSKLIFVQ 170 (174)
T ss_pred ceEEEEecCCCC-CHHHHHHHHHHHHHcCCCcceeEecC
Confidence 799999998655 45679999999999999999998864
No 106
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=35.60 E-value=66 Score=29.48 Aligned_cols=54 Identities=17% Similarity=0.126 Sum_probs=39.5
Q ss_pred CCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHH
Q 018541 148 LGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLL 211 (354)
Q Consensus 148 ~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw 211 (354)
...+.+.|-++.|++++|+.-.+.. +|+ .....+|+ .|--.+=++|...|.+|+
T Consensus 133 ~~~~~lvll~~~DEvLd~~~a~~~~-----~~~--~~~i~~gg---dH~f~~f~~~l~~i~~f~ 186 (187)
T PF05728_consen 133 NPERYLVLLQTGDEVLDYREAVAKY-----RGC--AQIIEEGG---DHSFQDFEEYLPQIIAFL 186 (187)
T ss_pred CCccEEEEEecCCcccCHHHHHHHh-----cCc--eEEEEeCC---CCCCccHHHHHHHHHHhh
Confidence 3458999999999999995443332 233 23455676 677788899999999886
No 107
>PF14412 AHH: A nuclease family of the HNH/ENDO VII superfamily with conserved AHH
Probab=34.74 E-value=77 Score=25.92 Aligned_cols=79 Identities=18% Similarity=0.211 Sum_probs=45.6
Q ss_pred CCCCccChHH---HHHHHHHHHHCCCce----EEEEcCCC---CCCcccccChHhHHHHHHHHHHHHHhhHHHHHhhhcc
Q 018541 158 DNDELAPQQV---IYNFARHLLALGGDV----KLVKLNGS---PHIGHYEYYPIQYRAAITGLLEKAASVYSQRIRQLGE 227 (354)
Q Consensus 158 kaD~LVp~~d---VE~ha~ear~~G~~V----~~v~Fe~S---pHV~HmR~hPeeYw~aV~~Fw~~~~~~~~~~~~~~~~ 227 (354)
.+--|||... ..+.-..+++.|+++ ..+.-+.+ .=..|-..||.+|-+.|.+=++++..
T Consensus 17 qaHHII~~~~~~~~~~~~~~l~~~g~~in~~~Ngv~Lp~~~~~~~~~H~g~H~~~Y~~~V~~~L~~~~~----------- 85 (109)
T PF14412_consen 17 QAHHIIPKNNFERSPKLRKILEKYGIDINDPENGVWLPNSEKPGRPPHRGRHPNEYNKYVRERLDKIEN----------- 85 (109)
T ss_pred ccceecCccchhccHHHHHHHHHcCCCcCCccceeeeeccCCCCcCCcCCCCcHHHHHHHHHHHHHHHH-----------
Confidence 3444556653 345555556778764 22222211 11124488999999999998888777
Q ss_pred ccCCCCccchhhhhhhhhhhhh
Q 018541 228 ISGMEGTHDEISELICDLQNVA 249 (354)
Q Consensus 228 ~~~~~g~~~~~~~~~~~~~~~~ 249 (354)
...+..+++.+-+.++++-.
T Consensus 86 --~~~~~~~~~~~~l~~i~~~l 105 (109)
T PF14412_consen 86 --SKKENREEFRKELQKIKNEL 105 (109)
T ss_pred --HhhcCHHHHHHHHHHHHHHH
Confidence 22335556666665555543
No 108
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=32.40 E-value=1.8e+02 Score=30.28 Aligned_cols=41 Identities=24% Similarity=0.353 Sum_probs=25.7
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCC
Q 018541 147 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSP 191 (354)
Q Consensus 147 ~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~Sp 191 (354)
...+|-|.+|.++|+++|-+|..-.+. -|.+=+...|..+|
T Consensus 350 r~~~plL~i~~~~D~v~P~eD~~lia~----~s~~gk~~~~~~~~ 390 (411)
T PF06500_consen 350 RCPTPLLAINGEDDPVSPIEDSRLIAE----SSTDGKALRIPSKP 390 (411)
T ss_dssp -BSS-EEEEEETT-SSS-HHHHHHHHH----TBTT-EEEEE-SSS
T ss_pred CCCcceEEeecCCCCCCCHHHHHHHHh----cCCCCceeecCCCc
Confidence 456699999999999999998776554 34445566666555
No 109
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=32.24 E-value=1.2e+02 Score=31.22 Aligned_cols=61 Identities=26% Similarity=0.320 Sum_probs=47.5
Q ss_pred CCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCccc--ccChHhHHHHHHHHHHH
Q 018541 148 LGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHY--EYYPIQYRAAITGLLEK 213 (354)
Q Consensus 148 ~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~Hm--R~hPeeYw~aV~~Fw~~ 213 (354)
.++|.|.+=...|.+-|.++.++.++..+..|. .+.+ +|+| ||- -.+.+.|-..|.+|++.
T Consensus 305 i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~---~~~i-~S~~-GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 305 IKAPVLVVGITSDWLFPPELQRALAEALPAAGA---LREI-DSPY-GHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred CccCEEEEEecccccCCHHHHHHHHHhccccCc---eEEe-cCCC-CchhhhcchhhhhHHHHHHhhc
Confidence 568999999999999999999999999988775 4444 3555 653 23456677889998864
No 110
>PF09497 Med12: Transcription mediator complex subunit Med12; InterPro: IPR019035 The Mediator complex is a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. On recruitment the Mediator complex unfolds to an extended conformation and partially surrounds RNA polymerase II, specifically interacting with the unphosphorylated form of the C-terminal domain (CTD) of RNA polymerase II. The Mediator complex dissociates from the RNA polymerase II holoenzyme and stays at the promoter when transcriptional elongation begins. The Mediator complex is composed of at least 31 subunits: MED1, MED4, MED6, MED7, MED8, MED9, MED10, MED11, MED12, MED13, MED13L, MED14, MED15, MED16, MED17, MED18, MED19, MED20, MED21, MED22, MED23, MED24, MED25, MED26, MED27, MED29, MED30, MED31, CCNC, CDK8 and CDC2L6/CDK11. The subunits form at least three structurally distinct submodules. The head and the middle modules interact directly with RNA polymerase II, whereas the elongated tail module interacts with gene-specific regulatory proteins. Mediator containing the CDK8 module is less active than Mediator lacking this module in supporting transcriptional activation. The head module contains: MED6, MED8, MED11, SRB4/MED17, SRB5/MED18, ROX3/MED19, SRB2/MED20 and SRB6/MED22. The middle module contains: MED1, MED4, NUT1/MED5, MED7, CSE2/MED9, NUT2/MED10, SRB7/MED21 and SOH1/MED31. CSE2/MED9 interacts directly with MED4. The tail module contains: MED2, PGD1/MED3, RGR1/MED14, GAL11/MED15 and SIN4/MED16. The CDK8 module contains: MED12, MED13, CCNC and CDK8. Individual preparations of the Mediator complex lacking one or more distinct subunits have been variously termed ARC, CRSP, DRIP, PC2, SMCC and TRAP. Med12 is a component of the evolutionarily conserved Mediator complex []. The Med12 subunit may specifically regulate transcription of targets of the Wnt signaling pathway and SHH signaling pathway. Med12 is a negative regulator of the Gli3-dependent sonic hedgehog signaling pathway via its interaction with Gli3 within the Mediator. A complex is formed between Med12, Med13, CDK8 and CycC which is responsible for suppression of transcription []. ; GO: 0001104 RNA polymerase II transcription cofactor activity, 0006357 regulation of transcription from RNA polymerase II promoter, 0016592 mediator complex
Probab=32.11 E-value=16 Score=28.33 Aligned_cols=20 Identities=25% Similarity=0.240 Sum_probs=18.4
Q ss_pred CccchhhhhhhcccccCCCc
Q 018541 300 SAHSVLGEFLFDVCVPKNVE 319 (354)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~ 319 (354)
=|||.=|+.|||.|.-+||.
T Consensus 36 iPhg~k~~~ll~~l~~~~VP 55 (64)
T PF09497_consen 36 IPHGIKKEELLEQLCEYNVP 55 (64)
T ss_pred CCCcccHHHHHHHHHHcCCC
Confidence 38999999999999999986
No 111
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=29.81 E-value=1e+02 Score=29.19 Aligned_cols=60 Identities=22% Similarity=0.375 Sum_probs=45.1
Q ss_pred CCCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHH
Q 018541 146 VDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLE 212 (354)
Q Consensus 146 ~~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~ 212 (354)
.+..+|-|+++.++|+++++..+-+-+ ++.+.+.+.-.++.|-=|-+. +.-.++|.+||+
T Consensus 146 ~P~P~~~lvi~g~~Ddvv~l~~~l~~~-----~~~~~~~i~i~~a~HFF~gKl--~~l~~~i~~~l~ 205 (210)
T COG2945 146 APCPSPGLVIQGDADDVVDLVAVLKWQ-----ESIKITVITIPGADHFFHGKL--IELRDTIADFLE 205 (210)
T ss_pred cCCCCCceeEecChhhhhcHHHHHHhh-----cCCCCceEEecCCCceecccH--HHHHHHHHHHhh
Confidence 467789999999999888776554432 347888899999999766543 456677888874
No 112
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=29.63 E-value=1.3e+02 Score=31.27 Aligned_cols=52 Identities=17% Similarity=0.077 Sum_probs=37.2
Q ss_pred CCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccC
Q 018541 147 DLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYY 199 (354)
Q Consensus 147 ~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~h 199 (354)
...+|....||++|-+++.+||+.+......... ...+.+++=.|..=+-.+
T Consensus 330 ~i~~P~~l~~g~~D~l~~~~DV~~~~~~~~~~~~-~~~~~~~~ynHlDFi~g~ 381 (403)
T KOG2624|consen 330 NIKVPTALYYGDNDWLADPEDVLILLLVLPNSVI-KYIVPIPEYNHLDFIWGL 381 (403)
T ss_pred ccccCEEEEecCCcccCCHHHHHHHHHhcccccc-cccccCCCccceeeeecc
Confidence 3477999999999999999999999888876544 333335555555444333
No 113
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=25.51 E-value=93 Score=28.43 Aligned_cols=41 Identities=17% Similarity=0.322 Sum_probs=28.7
Q ss_pred CCCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCC
Q 018541 146 VDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNG 189 (354)
Q Consensus 146 ~~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~ 189 (354)
.....|.|-+++++|.+++.+.-+.+++..... .+...+++
T Consensus 158 ~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~---~~v~~h~g 198 (212)
T PF03959_consen 158 PKISIPTLHVIGENDPVVPPERSEALAEMFDPD---ARVIEHDG 198 (212)
T ss_dssp TT---EEEEEEETT-SSS-HHHHHHHHHHHHHH---EEEEEESS
T ss_pred ccCCCCeEEEEeCCCCCcchHHHHHHHHhccCC---cEEEEECC
Confidence 345679999999999999999999999988875 44445544
No 114
>KOG0622 consensus Ornithine decarboxylase [Amino acid transport and metabolism]
Probab=24.12 E-value=1.4e+02 Score=31.34 Aligned_cols=43 Identities=21% Similarity=0.123 Sum_probs=39.1
Q ss_pred cChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHH
Q 018541 163 APQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITG 209 (354)
Q Consensus 163 Vp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~ 209 (354)
+.-++++.+.+.+++.|.+|..+.| |||--+.+++-|.+++.+
T Consensus 190 ~~~~~~~~lLd~ak~l~lnvvGvsf----HvGSgc~d~~~y~~Ai~d 232 (448)
T KOG0622|consen 190 CSLDNCRHLLDMAKELELNVVGVSF----HVGSGCTDLQAYRDAISD 232 (448)
T ss_pred CCHHHHHHHHHHHHHcCceEEEEEE----EecCCCCCHHHHHHHHHH
Confidence 3567899999999999999999988 899999999999999875
No 115
>KOG2203 consensus GTP-binding protein [General function prediction only]
Probab=23.27 E-value=49 Score=36.02 Aligned_cols=83 Identities=17% Similarity=0.115 Sum_probs=62.4
Q ss_pred hHHHHHHHHHHHHC------CCceEEEEcCCCCCCcccccCh-HhHHHHHHHHHHHHHh--hHHHHHhhhccccCCCCcc
Q 018541 165 QQVIYNFARHLLAL------GGDVKLVKLNGSPHIGHYEYYP-IQYRAAITGLLEKAAS--VYSQRIRQLGEISGMEGTH 235 (354)
Q Consensus 165 ~~dVE~ha~ear~~------G~~V~~v~Fe~SpHV~HmR~hP-eeYw~aV~~Fw~~~~~--~~~~~~~~~~~~~~~~g~~ 235 (354)
.+|||+|+...|.. |---+...++=|.||-|+-.++ ++-|.+|.+..++... +|--+..+.+...|+ ++
T Consensus 438 s~diea~i~~lr~akLke~~~~~e~~l~~else~Ve~ll~~~s~evW~ti~n~f~~e~n~av~~~~~~~~~f~~~~--de 515 (772)
T KOG2203|consen 438 SRDIEAHISSLRTAKLKEKTGLYEKKLVPELSEPVEALLDGASKEVWDTIRNLFRRETNTAVYGLSNAVYGFEIGL--DE 515 (772)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccHhhhHHHHHHHhccccccHHHHHHHHHhccchhHHHHhhccccccccc--ch
Confidence 57999999888643 3233556788899999999996 8899999988877443 455556888888777 56
Q ss_pred chhhhhhhhhhhhh
Q 018541 236 DEISELICDLQNVA 249 (354)
Q Consensus 236 ~~~~~~~~~~~~~~ 249 (354)
.+..+.+-||++-|
T Consensus 516 ~t~~~m~~nlk~~a 529 (772)
T KOG2203|consen 516 ETRDKMVKNLKNYA 529 (772)
T ss_pred hhHHHHHHHHHHHH
Confidence 67777788888765
No 116
>PF15585 Imm46: Immunity protein 46
Probab=22.89 E-value=2e+02 Score=25.36 Aligned_cols=69 Identities=25% Similarity=0.266 Sum_probs=46.7
Q ss_pred EEEecCCCC-ccChHHHHHHHHHHHHCCCc--eEEEEcCCC--CCCcccccChHhHHHHHHHHHHHHHhhHHHH
Q 018541 153 LIICSDNDE-LAPQQVIYNFARHLLALGGD--VKLVKLNGS--PHIGHYEYYPIQYRAAITGLLEKAASVYSQR 221 (354)
Q Consensus 153 LYLYSkaD~-LVp~~dVE~ha~ear~~G~~--V~~v~Fe~S--pHV~HmR~hPeeYw~aV~~Fw~~~~~~~~~~ 221 (354)
.+=|+++|. .-.-+.+++..+...+.++. |+.....|+ -|++.+-.|+.+++..|-+..++...+-...
T Consensus 11 ~~s~~~~D~~~~~~~~~~~i~~~i~~~~~~~~~~L~~~NG~~~l~~~g~~NHr~~~~~eii~lf~~i~e~aPGS 84 (129)
T PF15585_consen 11 RESYSDEDDEAKLEKIIQEIQERISELDWGGLVDLRAMNGSYFLHFGGLSNHRGQEAPEIIELFERIAEIAPGS 84 (129)
T ss_pred ecccccCcchhhHHHHHHHHHHHHHhcCCCCeEEEEecCCcEEEEEccccCCCccchHHHHHHHHHHHHhCCCc
Confidence 345667776 33444455555555666665 555555554 5999999999999999998888877665433
No 117
>TIGR01244 conserved hypothetical protein TIGR01244. No member of this family is characterized. The member from Xylella fastidiosa is a longer protein with an N-terminal region described by this model, followed by a metallo-beta-lactamase family domain and an additional C-terminal region. Members scoring above the trusted cutoff are limited to the proteobacteria.
Probab=22.62 E-value=90 Score=26.79 Aligned_cols=28 Identities=18% Similarity=0.122 Sum_probs=18.8
Q ss_pred hccCCCCeEEEEeCCChHHHHHHHHHHH
Q 018541 29 LRIQTCPVVFVALSGGTKACMHKAFQII 56 (354)
Q Consensus 29 l~~~~~PIlfH~FSnGG~~~ly~v~qll 56 (354)
+...+.||++|+-||.=.+.++.+.+..
T Consensus 82 ~~~~~~pvL~HC~sG~Rt~~l~al~~~~ 109 (135)
T TIGR01244 82 IGAAEGPVLAYCRSGTRSSLLWGFRQAA 109 (135)
T ss_pred HHhCCCCEEEEcCCChHHHHHHHHHHHH
Confidence 4446789999999997445555544443
No 118
>smart00012 PTPc_DSPc Protein tyrosine phosphatase, catalytic domain, undefined specificity. Protein tyrosine phosphatases. Homologues detected by this profile and not by those of "PTPc" or "DSPc" are predicted to be protein phosphatases with a similar fold to DSPs and PTPs, yet with unpredicted specificities.
Probab=22.35 E-value=82 Score=24.20 Aligned_cols=18 Identities=22% Similarity=0.266 Sum_probs=14.0
Q ss_pred CCCeEEEEeCCChHHHHH
Q 018541 33 TCPVVFVALSGGTKACMH 50 (354)
Q Consensus 33 ~~PIlfH~FSnGG~~~ly 50 (354)
+.||++|+..+.|...+.
T Consensus 39 ~~pvlVHC~~G~gRtg~~ 56 (105)
T smart00012 39 SGPVVVHCSAGVGRTGTF 56 (105)
T ss_pred CCCEEEEeCCCCChhhHH
Confidence 579999999998864444
No 119
>smart00404 PTPc_motif Protein tyrosine phosphatase, catalytic domain motif.
Probab=22.35 E-value=82 Score=24.20 Aligned_cols=18 Identities=22% Similarity=0.266 Sum_probs=14.0
Q ss_pred CCCeEEEEeCCChHHHHH
Q 018541 33 TCPVVFVALSGGTKACMH 50 (354)
Q Consensus 33 ~~PIlfH~FSnGG~~~ly 50 (354)
+.||++|+..+.|...+.
T Consensus 39 ~~pvlVHC~~G~gRtg~~ 56 (105)
T smart00404 39 SGPVVVHCSAGVGRTGTF 56 (105)
T ss_pred CCCEEEEeCCCCChhhHH
Confidence 579999999998864444
No 120
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=22.29 E-value=95 Score=30.19 Aligned_cols=55 Identities=24% Similarity=0.303 Sum_probs=41.1
Q ss_pred CCCCCCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHH
Q 018541 146 VDLGTPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAA 206 (354)
Q Consensus 146 ~~~~aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~a 206 (354)
.+..+|.|=.|+.+|.+||-++-.++|+.... -+.+.-|+.-|. |-.|..+-...
T Consensus 196 Id~~C~VLTvhGs~D~IVPve~AkefAk~i~n----H~L~iIEgADHn--yt~~q~~l~~l 250 (269)
T KOG4667|consen 196 IDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPN----HKLEIIEGADHN--YTGHQSQLVSL 250 (269)
T ss_pred cCccCceEEEeccCCceeechhHHHHHHhccC----CceEEecCCCcC--ccchhhhHhhh
Confidence 57888999999999999999999999988765 455666777774 33444443333
No 121
>PF08357 SEFIR: SEFIR domain; InterPro: IPR013568 This domain is found in IL17 receptors (IL17Rs, e.g. Q60943 from SWISSPROT) and SEF proteins (e.g. Q8QHJ9 from SWISSPROT). The latter are feedback inhibitors of FGF signalling and are also thought to be receptors. Due to its similarity to the TIR domain (IPR000157 from INTERPRO), the SEFIR region is thought to be involved in homotypic interactions with other SEFIR/TIR-domain-containing proteins. Thus, SEFs and IL17Rs may be involved in TOLL/IL1R-like signalling pathways [].
Probab=21.79 E-value=90 Score=26.62 Aligned_cols=52 Identities=21% Similarity=0.181 Sum_probs=37.6
Q ss_pred CEEEEecCCCCccChHHHHHHHHHHHHC-CCceEEEEcCCCCCCcccccChHhHHHH
Q 018541 151 PFLIICSDNDELAPQQVIYNFARHLLAL-GGDVKLVKLNGSPHIGHYEYYPIQYRAA 206 (354)
Q Consensus 151 PrLYLYSkaD~LVp~~dVE~ha~ear~~-G~~V~~v~Fe~SpHV~HmR~hPeeYw~a 206 (354)
+.+..||. |.--.-+-|.++++..++. |++|..=.|+... ++ +..|.++...
T Consensus 2 kVfI~Ys~-d~~~h~~~V~~la~~L~~~~g~~V~lD~~~~~~-i~--~~g~~~W~~~ 54 (150)
T PF08357_consen 2 KVFISYSH-DSEEHKEWVLALAEFLRQNCGIDVILDQWELNE-IA--RQGPPRWMER 54 (150)
T ss_pred eEEEEeCC-CCHHHHHHHHHHHHHHHhccCCceeecHHhhcc-cc--cCCHHHHHHH
Confidence 46788999 5555568899999999999 9999988887532 11 3345555444
No 122
>PRK00979 tetrahydromethanopterin S-methyltransferase subunit H; Provisional
Probab=21.76 E-value=1.5e+02 Score=29.72 Aligned_cols=54 Identities=15% Similarity=0.147 Sum_probs=37.8
Q ss_pred HHHHhhhcCCCcccchhhhc-cCCCCeEEEEeCCChHHHHHHHHHHHHhcccCCCCccchhhhccCceEEEEeCCC
Q 018541 11 LVLLYMDLNPFPIFGTQELR-IQTCPVVFVALSGGTKACMHKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSSP 85 (354)
Q Consensus 11 ~~~a~~ll~~~~~~Ll~~l~-~~~~PIlfH~FSnGG~~~ly~v~qll~~~~~~~~~~~~yq~l~~rI~G~IfDSaP 85 (354)
.+.|++|++. .+++. .++.|.++|+|.... ..+-.+++.++..+..+ ..+||+-
T Consensus 51 k~~Ae~Li~~-----~~elsd~tg~p~~~~v~~~~~-eam~k~I~~v~~~~d~P---------------l~IDSt~ 105 (308)
T PRK00979 51 KEKAEALINR-----QEELSDKTGNPALLDVVGESP-EAMEKYIDFVSEITDLP---------------FLIDSTS 105 (308)
T ss_pred HHHHHHHHHH-----HHHHHHHhCCCeEEEEecChH-HHHHHHHHHHHhcCCCC---------------EEEeCCC
Confidence 3567788874 34444 678899999999998 45677777776643332 6899954
No 123
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=21.45 E-value=1.3e+02 Score=25.84 Aligned_cols=43 Identities=23% Similarity=0.159 Sum_probs=29.7
Q ss_pred chhhhccCCCCeEEEEeCCChHHHHHHHHHHHHhcccCCCCccchhhhccCceEEEEeCCCC
Q 018541 25 GTQELRIQTCPVVFVALSGGTKACMHKAFQIIQATCEGQLNVDESRLIRSCVAGQIYDSSPV 86 (354)
Q Consensus 25 Ll~~l~~~~~PIlfH~FSnGG~~~ly~v~qll~~~~~~~~~~~~yq~l~~rI~G~IfDSaPg 86 (354)
+++.+...+ +.+-++|-||...+..+.+ . -++|+++|++++|.
T Consensus 37 ~~~~l~~~~--~~~vG~S~Gg~~~~~~a~~----------~-------p~~v~~lvl~~~~~ 79 (230)
T PF00561_consen 37 LREALGIKK--INLVGHSMGGMLALEYAAQ----------Y-------PERVKKLVLISPPP 79 (230)
T ss_dssp HHHHHTTSS--EEEEEETHHHHHHHHHHHH----------S-------GGGEEEEEEESESS
T ss_pred HHHHhCCCC--eEEEEECCChHHHHHHHHH----------C-------chhhcCcEEEeeec
Confidence 677777776 9999999999533333221 1 12599999999873
No 124
>PRK10945 gene expression modulator; Provisional
Probab=21.39 E-value=22 Score=28.19 Aligned_cols=9 Identities=44% Similarity=0.966 Sum_probs=4.1
Q ss_pred hhcccccCCC
Q 018541 309 LFDVCVPKNV 318 (354)
Q Consensus 309 ~~~~~~~~~~ 318 (354)
||| ||||.|
T Consensus 59 LyD-kVP~~v 67 (72)
T PRK10945 59 LYD-KIPSSV 67 (72)
T ss_pred hHh-hcCHHH
Confidence 444 444443
No 125
>COG4635 HemG Flavodoxin [Energy production and conversion / Coenzyme metabolism]
Probab=21.28 E-value=3.4e+02 Score=25.11 Aligned_cols=71 Identities=23% Similarity=0.336 Sum_probs=48.8
Q ss_pred CEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCC--CCCcccc-------cChHhHHHHHHHHHHHHHhhHHHH
Q 018541 151 PFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGS--PHIGHYE-------YYPIQYRAAITGLLEKAASVYSQR 221 (354)
Q Consensus 151 PrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~S--pHV~HmR-------~hPeeYw~aV~~Fw~~~~~~~~~~ 221 (354)
..|++||..|--. -+-.+..+.+.++.|++|+.+.-..- +--+|+- .+-..|-+++.+|+++-......+
T Consensus 2 k~LIlYstr~GqT-~kIA~~iA~~L~e~g~qvdi~dl~~~~~~~l~~ydavVIgAsI~~~h~~~~~~~Fv~k~~e~L~~k 80 (175)
T COG4635 2 KTLILYSTRDGQT-RKIAEYIASHLRESGIQVDIQDLHAVEEPALEDYDAVVIGASIRYGHFHEAVQSFVKKHAEALSTK 80 (175)
T ss_pred ceEEEEecCCCcH-HHHHHHHHHHhhhcCCeeeeeehhhhhccChhhCceEEEecchhhhhhHHHHHHHHHHHHHHHhcC
Confidence 4799999999865 45677888999999999877653211 1122221 234556788999999887777666
Q ss_pred H
Q 018541 222 I 222 (354)
Q Consensus 222 ~ 222 (354)
.
T Consensus 81 P 81 (175)
T COG4635 81 P 81 (175)
T ss_pred C
Confidence 4
No 126
>COG1654 BirA Biotin operon repressor [Transcription]
Probab=20.76 E-value=1.1e+02 Score=24.48 Aligned_cols=23 Identities=17% Similarity=0.394 Sum_probs=19.5
Q ss_pred ChHHHHHHHHHHHHCCCceEEEE
Q 018541 164 PQQVIYNFARHLLALGGDVKLVK 186 (354)
Q Consensus 164 p~~dVE~ha~ear~~G~~V~~v~ 186 (354)
.-..|.+|++..|+.|++|+.+.
T Consensus 32 SRtaVwK~Iq~Lr~~G~~I~s~~ 54 (79)
T COG1654 32 SRTAVWKHIQQLREEGVDIESVR 54 (79)
T ss_pred cHHHHHHHHHHHHHhCCceEecC
Confidence 34589999999999999998764
No 127
>PF08212 Lipocalin_2: Lipocalin-like domain; InterPro: IPR000566 Proteins which transport small hydrophobic molecules such as steroids, bilins, retinoids, and lipids share limited regions of sequence homology and a common tertiary structure architecture [, , , , ]. This is an eight stranded antiparallel beta-barrel with a repeated + 1 topology enclosing a internal ligand binding site [, ]. The name 'lipocalin' has been proposed [] for this protein family, but cytosolic fatty-acid binding proteins are also included. The sequences of most members of the family, the core or kernal lipocalins, are characterised by three short conserved stretches of residues, while others, the outlier lipocalin group, share only one or two of these [, ]. Proteins known to belong to this family include alpha-1-microglobulin (protein HC); alpha-1-acid glycoprotein (orosomucoid) []; aphrodisin; apolipoprotein D; beta-lactoglobulin; complement component C8 gamma chain []; crustacyanin []; epididymal-retinoic acid binding protein (E-RABP) []; insectacyanin; odorant-binding protein (OBP); human pregnancy-associated endometrial alpha-2 globulin; probasin (PB), a rat prostatic protein; prostaglandin D synthase (5.3.99.2 from EC) []; purpurin; Von Ebner's gland protein (VEGP) []; and lizard epididymal secretory protein IV (LESP IV) [].; GO: 0005488 binding; PDB: 3EBW_B 1QWD_A 2ACO_A 3MBT_A.
Probab=20.66 E-value=97 Score=26.61 Aligned_cols=36 Identities=17% Similarity=0.122 Sum_probs=27.4
Q ss_pred CEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEc
Q 018541 151 PFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKL 187 (354)
Q Consensus 151 PrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~F 187 (354)
-.|+|.|++ +-++.+.+++..+.++++|+++....+
T Consensus 105 ~~~WILsR~-p~~~~~~~~~~~~~~~~~G~d~~~l~~ 140 (143)
T PF08212_consen 105 EYLWILSRT-PQLSEETYAEILDRAKQQGYDVSKLIW 140 (143)
T ss_dssp CEEEEEESS-SS--HHHHHHHHHHHHHTT--GGGEEE
T ss_pred CEEEEEeCC-CCCCHHHHHHHHHHHHHcCCCHHHeEE
Confidence 689999998 556888999999999999999865554
No 128
>PRK10391 oriC-binding nucleoid-associated protein; Provisional
Probab=20.58 E-value=27 Score=27.65 Aligned_cols=15 Identities=60% Similarity=0.833 Sum_probs=8.7
Q ss_pred hhhhhhhcc-cccCCC
Q 018541 304 VLGEFLFDV-CVPKNV 318 (354)
Q Consensus 304 ~~~~~~~~~-~~~~~~ 318 (354)
+.|--|||+ ||||.|
T Consensus 51 ~~~~kLyD~gkVP~sV 66 (71)
T PRK10391 51 VSGGRLFDLGQVPKSV 66 (71)
T ss_pred HhCccccccccCCHHH
Confidence 344456664 677655
No 129
>TIGR01391 dnaG DNA primase, catalytic core. This protein contains a CHC2 zinc finger (Pfam:PF01807) and a Toprim domain (Pfam:PF01751).
Probab=20.56 E-value=4.4e+02 Score=27.10 Aligned_cols=92 Identities=29% Similarity=0.390 Sum_probs=58.9
Q ss_pred CCEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHH-----HHHHHHHHHHhhHHHHHhh
Q 018541 150 TPFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRA-----AITGLLEKAASVYSQRIRQ 224 (354)
Q Consensus 150 aPrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~-----aV~~Fw~~~~~~~~~~~~~ 224 (354)
++.++|+-++|. ..-+..++.++...+.|..|..+.+++ -++|++|.. ++.+.++++.....-....
T Consensus 300 ~~~vvl~~D~D~-aG~~aa~r~~~~l~~~g~~v~v~~lp~-------gkDpdd~l~~~g~~~~~~~l~~a~~~~~f~~~~ 371 (415)
T TIGR01391 300 ADEIILCFDGDK-AGRKAALRAIELLLPLGINVKVIKLPG-------GKDPDEYLRKEGVEALKKLLENSKSLIEFLIAR 371 (415)
T ss_pred CCeEEEEeCCCH-HHHHHHHHHHHHHHHcCCeEEEEECCC-------CCCHHHHHHHhCHHHHHHHHhcCCCHHHHHHHH
Confidence 368999999997 345567778888888899999888875 379999975 5666666644444444433
Q ss_pred hccccCCCCccchhhhhhhhhhhhhh
Q 018541 225 LGEISGMEGTHDEISELICDLQNVAV 250 (354)
Q Consensus 225 ~~~~~~~~g~~~~~~~~~~~~~~~~~ 250 (354)
..+..+.+ +.++....+.++.....
T Consensus 372 ~~~~~~~~-~~~~~~~~~~~~~~~~~ 396 (415)
T TIGR01391 372 LLSNYNLD-TPEEKAKLVEELLPLIK 396 (415)
T ss_pred HHhcCCCC-CHHHHHHHHHHHHHHHH
Confidence 33333432 33444445555444333
No 130
>TIGR00238 KamA family protein. Note that the E. coli homolog was expressed in E. coli and purified and found not to display display lysine 2,3-aminomutase activity. Active site residues are found in 100 residue extension in B. subtilis. Name changed to KamA family protein.
Probab=20.46 E-value=2.4e+02 Score=28.11 Aligned_cols=113 Identities=19% Similarity=0.246 Sum_probs=60.9
Q ss_pred CEEEEecCCCCccChHHHHHHHHHHHHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHHHHHhhHHHHHhhhccccC
Q 018541 151 PFLIICSDNDELAPQQVIYNFARHLLALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKAASVYSQRIRQLGEISG 230 (354)
Q Consensus 151 PrLYLYSkaD~LVp~~dVE~ha~ear~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~~~~~~~~~~~~~~~~~~~ 230 (354)
..+=+.++.--..|..--++.++..++.|..+-.+ .|.+|-+.-.++=.++|...-+......+| ..=
T Consensus 192 ~~IRi~tr~~~~~P~rit~el~~~L~~~~~~~~~v-----sh~nh~~Ei~~~~~~ai~~L~~aGi~v~~q-------tvL 259 (331)
T TIGR00238 192 VRLRIGTRLPVVIPQRITDELCELLASFELQLMLV-----THINHCNEITEEFAEAMKKLRTVNVTLLNQ-------SVL 259 (331)
T ss_pred cEEEeecCCCccCchhcCHHHHHHHHhcCCcEEEE-----ccCCChHhCCHHHHHHHHHHHHcCCEEEee-------cce
Confidence 35556666655555555566666666666544332 366665433344444443322221111111 112
Q ss_pred CCCccch---hhhhhhhhhhhhhcccccccccccCCCCcccccCcccc
Q 018541 231 MEGTHDE---ISELICDLQNVAVNSNQSLRRVAVEPSDHFFLPSSTEL 275 (354)
Q Consensus 231 ~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (354)
+.|.-|+ +.+++-.|.+..+..---++-.+++.+.||.+|.....
T Consensus 260 l~gvnD~~~~l~~L~~~l~~~gV~pyyl~~~~~~~g~~~f~~~~~~~~ 307 (331)
T TIGR00238 260 LRGVNDRAQILAKLSIALFKVGIIPYYLHYLDKVQGAKHFLVPDAEAA 307 (331)
T ss_pred ECCcCCCHHHHHHHHHHHhhcCeecCeecCcCCCCCcccccCCHHHHH
Confidence 2344555 55666677766666655566666777789888876543
No 131
>PF14417 MEDS: MEDS: MEthanogen/methylotroph, DcmR Sensory domain
Probab=20.37 E-value=87 Score=28.30 Aligned_cols=69 Identities=10% Similarity=0.010 Sum_probs=44.4
Q ss_pred HHCCCceEEEEcCCCCCCcccccChHhHHHHHHHHHHHHHhhHHHHHhhhccccCCCCccchhhhhhhhhhhhhhcc
Q 018541 176 LALGGDVKLVKLNGSPHIGHYEYYPIQYRAAITGLLEKAASVYSQRIRQLGEISGMEGTHDEISELICDLQNVAVNS 252 (354)
Q Consensus 176 r~~G~~V~~v~Fe~SpHV~HmR~hPeeYw~aV~~Fw~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 252 (354)
|+.|.++-. ...-..|+.++...+++|++.+..|++..+.. +..++=+....+...++...|++....-
T Consensus 6 r~s~~~~~~-~~~~g~H~c~~Y~~~~e~~~~~~~Fi~~GL~~-------ge~~l~v~~~~~~~~~l~~~L~~~~~d~ 74 (191)
T PF14417_consen 6 RKSGIDAIG-DIPWGDHICAFYDDEEELLEVLVPFIREGLAR-------GERCLYVAPDPRRVEELRDELRKAGPDV 74 (191)
T ss_pred ccccCcccc-CCCCCceEEEEECCHHHHHHHHHHHHHHHHHC-------CCeEEEEECCCCCHHHHHHHHHhcCCch
Confidence 445666655 66677999999999999999999999876543 2222222111344445556676664443
No 132
>PHA02820 phospholipase-D-like protein; Provisional
Probab=20.24 E-value=1.4e+02 Score=30.85 Aligned_cols=57 Identities=21% Similarity=0.147 Sum_probs=40.2
Q ss_pred EecCCCCccChHHHHHHHH-HHHHCCCceEEEE--cCCCCCCcccccChHhHHHHHHHHHHHHHhh
Q 018541 155 ICSDNDELAPQQVIYNFAR-HLLALGGDVKLVK--LNGSPHIGHYEYYPIQYRAAITGLLEKAASV 217 (354)
Q Consensus 155 LYSkaD~LVp~~dVE~ha~-ear~~G~~V~~v~--Fe~SpHV~HmR~hPeeYw~aV~~Fw~~~~~~ 217 (354)
+|+.+++..-|..+.+-.. .+.++|++|+... |.+++++.+ .|...+.++++....+
T Consensus 245 ~~~~~~~~~yw~~i~~AL~~AA~~RGV~VriLvp~~~d~~~~~~------a~~~~l~~L~~~gv~I 304 (424)
T PHA02820 245 IYSKAGKILFWPYIEDELRRAAIDRKVSVKLLISCWQRSSFIMR------NFLRSIAMLKSKNINI 304 (424)
T ss_pred eeccCCcccchHHHHHHHHHHHHhCCCEEEEEEeccCCCCccHH------HHHHHHHHHhccCceE
Confidence 3557788899999998887 4788999998864 788877763 4555555555443333
No 133
>PF08249 Mastoparan: Mastoparan protein; InterPro: IPR013213 Mastoparans are a family of tetradecapeptides from wasp venom that have been shown to directly activate GTP-binding regulatory proteins. These peptides show selectivity among G proteins: they strongly activate Go and Gi but not Gs or Gt. The peptides of this family are composed by 14 amino acids but they can assume different structures [].; PDB: 2CZP_A 1A13_A 1D7N_A.
Probab=20.02 E-value=27 Score=19.38 Aligned_cols=13 Identities=15% Similarity=-0.038 Sum_probs=9.6
Q ss_pred hhHHHHHHHhhhc
Q 018541 6 SWLRMLVLLYMDL 18 (354)
Q Consensus 6 ~~~~~~~~a~~ll 18 (354)
-|+.|+.+|.|+|
T Consensus 2 N~K~~aA~akK~l 14 (14)
T PF08249_consen 2 NLKAIAALAKKIL 14 (14)
T ss_dssp -CCCHHHHHCCC-
T ss_pred CHHHHHHHHHhhC
Confidence 4888999998875
Done!