Query 018544
Match_columns 354
No_of_seqs 192 out of 1348
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 16:55:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018544.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018544hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1efv_A Electron transfer flavo 100.0 1.4E-99 5E-104 731.7 34.1 314 25-353 1-315 (315)
2 1o97_D Electron transferring f 100.0 1.2E-96 4E-101 712.8 33.5 310 27-352 2-320 (320)
3 1efp_A ETF, protein (electron 100.0 2.4E-96 8E-101 706.9 32.5 304 28-350 2-307 (307)
4 3ih5_A Electron transfer flavo 100.0 1.1E-37 3.9E-42 285.8 12.5 194 23-223 1-210 (217)
5 3fet_A Electron transfer flavo 100.0 2.8E-27 9.6E-32 208.2 17.1 161 24-222 2-165 (166)
6 1o97_C Electron transferring f 99.9 1.6E-24 5.3E-29 203.9 15.4 148 36-189 32-191 (264)
7 1efp_B ETF, protein (electron 99.9 1.7E-23 6E-28 195.5 17.8 148 35-189 31-189 (252)
8 1efv_B Electron transfer flavo 99.9 2.2E-23 7.4E-28 195.1 14.6 145 38-189 37-192 (255)
9 1ozh_A ALS, acetolactate synth 96.2 0.049 1.7E-06 55.6 13.3 113 236-352 209-337 (566)
10 4feg_A Pyruvate oxidase; carba 95.7 0.086 3E-06 54.2 12.7 112 237-352 215-339 (603)
11 3lq1_A 2-succinyl-5-enolpyruvy 95.7 0.049 1.7E-06 55.7 10.7 115 235-352 224-354 (578)
12 1ybh_A Acetolactate synthase, 95.4 0.1 3.5E-06 53.4 11.9 109 236-351 216-342 (590)
13 2pgn_A Cyclohexane-1,2-dione h 95.4 0.047 1.6E-06 56.0 9.2 114 236-351 207-334 (589)
14 2q28_A Oxalyl-COA decarboxylas 95.3 0.039 1.3E-06 56.1 8.6 114 236-351 213-334 (564)
15 2c31_A Oxalyl-COA decarboxylas 95.1 0.059 2E-06 54.9 8.9 115 236-352 215-339 (568)
16 2iht_A Carboxyethylarginine sy 94.8 0.071 2.4E-06 54.4 8.7 114 236-352 218-352 (573)
17 1t9b_A Acetolactate synthase, 94.8 0.081 2.8E-06 55.3 9.1 112 237-352 292-430 (677)
18 3eya_A Pyruvate dehydrogenase 94.6 0.15 5.1E-06 51.7 10.4 114 233-352 199-325 (549)
19 2x7j_A 2-succinyl-5-enolpyruvy 94.5 0.16 5.5E-06 52.1 10.4 113 236-351 245-373 (604)
20 2uz1_A Benzaldehyde lyase; thi 94.4 0.096 3.3E-06 53.3 8.3 115 236-352 206-335 (563)
21 1s5p_A NAD-dependent deacetyla 93.7 0.064 2.2E-06 48.8 5.0 58 293-351 169-231 (235)
22 2pan_A Glyoxylate carboligase; 93.6 0.15 5.3E-06 52.4 8.3 111 236-351 228-357 (616)
23 1v5e_A Pyruvate oxidase; oxido 93.6 0.36 1.2E-05 49.4 10.9 112 236-352 207-332 (590)
24 1q6z_A BFD, BFDC, benzoylforma 93.5 0.089 3E-06 53.0 6.2 114 236-352 202-331 (528)
25 1ma3_A SIR2-AF2, transcription 93.4 0.051 1.8E-06 50.0 3.8 61 292-353 184-249 (253)
26 1q1a_A HST2 protein; ternary c 92.8 0.1 3.5E-06 48.9 5.0 61 291-351 211-278 (289)
27 1yc5_A NAD-dependent deacetyla 91.8 0.15 5E-06 46.6 4.6 58 293-351 182-244 (246)
28 1m2k_A Silent information regu 91.7 0.19 6.6E-06 46.0 5.3 59 293-352 179-242 (249)
29 2hjh_A NAD-dependent histone d 90.8 0.32 1.1E-05 46.9 6.1 59 291-351 255-317 (354)
30 1q14_A HST2 protein; histone d 90.6 0.24 8.1E-06 48.0 5.0 61 291-351 219-286 (361)
31 3glr_A NAD-dependent deacetyla 88.6 0.45 1.5E-05 44.5 4.9 61 291-351 197-264 (285)
32 1uan_A Hypothetical protein TT 88.4 2.6 9E-05 37.6 9.8 95 25-127 1-107 (227)
33 3k35_A NAD-dependent deacetyla 88.2 0.65 2.2E-05 44.1 5.8 60 291-351 206-270 (318)
34 1j8f_A SIRT2, sirtuin 2, isofo 88.0 0.76 2.6E-05 43.7 6.3 61 291-351 220-303 (323)
35 3cf4_G Acetyl-COA decarboxylas 88.0 0.59 2E-05 39.9 5.0 111 236-352 36-169 (170)
36 3riy_A NAD-dependent deacetyla 87.5 0.6 2E-05 43.3 5.1 56 291-347 212-272 (273)
37 3pki_A NAD-dependent deacetyla 86.4 0.89 3E-05 43.8 5.7 60 291-351 206-270 (355)
38 3u31_A SIR2A, transcriptional 85.3 0.67 2.3E-05 43.4 4.2 60 291-352 216-281 (290)
39 2ixd_A LMBE-related protein; h 83.3 5.1 0.00017 36.2 9.1 96 26-127 4-109 (242)
40 4iao_A NAD-dependent histone d 81.0 2.1 7.3E-05 42.9 6.0 59 291-351 393-455 (492)
41 3hww_A 2-succinyl-5-enolpyruvy 80.8 4.4 0.00015 40.8 8.5 107 236-348 222-339 (556)
42 3okp_A GDP-mannose-dependent a 80.3 20 0.00069 32.8 12.5 116 23-147 2-118 (394)
43 3loq_A Universal stress protei 80.0 21 0.00072 31.9 12.2 121 8-143 147-286 (294)
44 3p9x_A Phosphoribosylglycinami 79.7 18 0.00063 31.9 11.2 102 25-140 2-104 (211)
45 4fzr_A SSFS6; structural genom 76.7 2.2 7.4E-05 40.3 4.5 115 19-148 9-153 (398)
46 3dlo_A Universal stress protei 76.6 26 0.0009 28.3 10.8 106 26-143 25-152 (155)
47 3oti_A CALG3; calicheamicin, T 76.2 3.4 0.00012 39.0 5.7 109 23-148 18-160 (398)
48 2vbi_A Pyruvate decarboxylase; 75.6 11 0.00038 37.9 9.7 111 236-351 211-336 (566)
49 3hgm_A Universal stress protei 72.5 32 0.0011 26.8 10.6 101 27-143 4-145 (147)
50 2wvg_A PDC, pyruvate decarboxy 69.6 15 0.00052 36.9 9.0 111 236-351 211-336 (568)
51 1ytl_A Acetyl-COA decarboxylas 69.1 2.5 8.7E-05 36.4 2.6 48 234-284 36-87 (174)
52 3vot_A L-amino acid ligase, BL 62.4 7.8 0.00027 37.2 5.0 82 45-141 19-100 (425)
53 3tnj_A Universal stress protei 62.4 27 0.00093 27.5 7.6 103 26-143 7-143 (150)
54 3tsa_A SPNG, NDP-rhamnosyltran 62.0 3 0.0001 39.1 1.8 43 104-149 103-145 (391)
55 1jmv_A USPA, universal stress 60.9 38 0.0013 26.2 8.2 86 26-127 3-113 (141)
56 3fg9_A Protein of universal st 59.8 61 0.0021 25.6 9.4 106 25-143 15-153 (156)
57 1meo_A Phosophoribosylglycinam 59.7 74 0.0025 27.8 10.5 99 27-139 2-101 (209)
58 3otg_A CALG1; calicheamicin, T 59.5 7.6 0.00026 36.4 4.2 41 105-148 120-160 (412)
59 1q74_A 1D-MYO-inosityl 2-aceta 58.6 30 0.001 32.0 8.1 41 81-121 78-135 (303)
60 1tq8_A Hypothetical protein RV 58.4 72 0.0025 25.8 11.4 106 23-143 15-154 (163)
61 3h4t_A Glycosyltransferase GTF 57.9 14 0.00047 35.1 5.8 107 26-145 1-122 (404)
62 2nxw_A Phenyl-3-pyruvate decar 57.8 17 0.00059 36.5 6.8 110 236-351 224-349 (565)
63 3rsc_A CALG2; TDP, enediyne, s 56.6 9.5 0.00032 35.9 4.4 109 22-146 17-147 (415)
64 2gek_A Phosphatidylinositol ma 56.5 7.4 0.00025 36.1 3.5 117 23-148 18-139 (406)
65 1jkx_A GART;, phosphoribosylgl 56.4 1E+02 0.0035 26.9 11.2 101 26-140 1-102 (212)
66 2vk8_A Pyruvate decarboxylase 54.0 14 0.00049 37.0 5.4 110 236-351 213-338 (563)
67 3tqr_A Phosphoribosylglycinami 52.9 99 0.0034 27.1 10.2 100 25-140 5-106 (215)
68 2vbf_A Branched-chain alpha-ke 52.3 13 0.00043 37.5 4.7 111 236-351 230-355 (570)
69 3mt0_A Uncharacterized protein 51.1 77 0.0026 28.1 9.5 107 23-143 5-124 (290)
70 3ble_A Citramalate synthase fr 51.0 1.6E+02 0.0054 27.5 12.7 63 72-138 173-236 (337)
71 3s3t_A Nucleotide-binding prot 50.5 85 0.0029 24.2 10.3 102 26-143 6-143 (146)
72 3fdx_A Putative filament prote 49.5 69 0.0024 24.7 8.0 41 103-143 94-140 (143)
73 3s5j_B Ribose-phosphate pyroph 49.0 13 0.00044 35.3 3.8 100 40-142 64-189 (326)
74 1f0k_A MURG, UDP-N-acetylgluco 48.9 1.5E+02 0.0051 26.6 11.3 108 26-145 7-125 (364)
75 2cw6_A Hydroxymethylglutaryl-C 48.0 1.5E+02 0.0051 26.9 11.1 64 71-138 159-223 (298)
76 3da8_A Probable 5'-phosphoribo 46.4 1.5E+02 0.005 26.0 10.2 106 18-139 5-111 (215)
77 2iya_A OLEI, oleandomycin glyc 46.1 72 0.0024 29.9 8.8 107 24-146 11-137 (424)
78 3n0v_A Formyltetrahydrofolate 44.6 1.9E+02 0.0064 26.5 12.4 103 22-141 87-190 (286)
79 2iyf_A OLED, oleandomycin glyc 44.6 83 0.0028 29.4 9.0 39 105-146 94-132 (430)
80 3o1l_A Formyltetrahydrofolate 44.0 2E+02 0.0067 26.6 11.8 100 23-139 103-203 (302)
81 3mt0_A Uncharacterized protein 43.2 89 0.003 27.6 8.6 126 8-143 113-272 (290)
82 3lou_A Formyltetrahydrofolate 42.7 2E+02 0.0069 26.4 11.5 102 23-141 93-195 (292)
83 1zud_1 Adenylyltransferase THI 42.0 47 0.0016 29.6 6.4 35 59-95 29-63 (251)
84 3dzc_A UDP-N-acetylglucosamine 42.0 51 0.0018 31.2 7.0 113 24-143 24-139 (396)
85 3etn_A Putative phosphosugar i 41.0 28 0.00095 30.4 4.6 94 234-337 58-159 (220)
86 3qe1_A Sorting nexin-27, G pro 40.8 31 0.0011 26.0 4.4 38 286-323 37-74 (107)
87 3dah_A Ribose-phosphate pyroph 39.9 16 0.00055 34.4 3.0 100 40-142 68-192 (319)
88 1nu0_A Hypothetical protein YQ 39.7 29 0.00099 28.5 4.2 40 104-143 42-92 (138)
89 3kcq_A Phosphoribosylglycinami 39.5 1.3E+02 0.0043 26.4 8.7 102 21-141 4-106 (215)
90 1ovm_A Indole-3-pyruvate decar 38.2 17 0.00058 36.3 3.0 109 236-351 211-335 (552)
91 3p0f_A Uridine phosphorylase 2 35.6 28 0.00095 32.3 3.8 53 238-318 92-144 (297)
92 3fro_A GLGA glycogen synthase; 35.3 1.3E+02 0.0046 27.5 8.7 47 103-150 105-156 (439)
93 3nrb_A Formyltetrahydrofolate 34.8 1E+02 0.0035 28.3 7.6 102 23-140 86-188 (287)
94 3dff_A Teicoplanin pseudoaglyc 33.6 82 0.0028 28.5 6.7 27 101-127 134-160 (273)
95 3hba_A Putative phosphosugar i 32.9 1.6E+02 0.0056 27.2 8.8 97 233-338 40-142 (334)
96 3av3_A Phosphoribosylglycinami 32.5 2.4E+02 0.0083 24.3 10.5 75 57-140 31-105 (212)
97 3obi_A Formyltetrahydrofolate 31.8 2.1E+02 0.0072 26.1 9.2 104 23-142 87-191 (288)
98 1v4v_A UDP-N-acetylglucosamine 31.4 2.3E+02 0.0078 25.5 9.5 38 105-143 81-119 (376)
99 1ydn_A Hydroxymethylglutaryl-C 31.3 2.4E+02 0.0081 25.4 9.5 63 71-137 158-221 (295)
100 1q77_A Hypothetical protein AQ 30.9 49 0.0017 25.5 4.1 39 103-143 97-135 (138)
101 1j5x_A Glucosamine-6-phosphate 30.5 38 0.0013 31.6 3.9 99 231-338 48-152 (342)
102 3fro_A GLGA glycogen synthase; 30.5 2.6E+02 0.0089 25.4 9.9 87 44-144 268-359 (439)
103 3dfi_A Pseudoaglycone deacetyl 30.3 1.1E+02 0.0036 27.7 6.8 27 101-127 131-157 (270)
104 4ffl_A PYLC; amino acid, biosy 30.2 35 0.0012 31.7 3.6 33 316-348 27-59 (363)
105 3rui_A Ubiquitin-like modifier 30.0 1.4E+02 0.0047 28.2 7.7 35 58-94 34-68 (340)
106 2ywr_A Phosphoribosylglycinami 29.6 2.7E+02 0.0094 24.0 9.3 68 58-134 30-97 (216)
107 2l2q_A PTS system, cellobiose- 29.6 1.5E+02 0.0053 22.5 6.8 85 236-353 6-106 (109)
108 2z08_A Universal stress protei 29.3 76 0.0026 24.4 5.0 103 26-143 3-134 (137)
109 3qhp_A Type 1 capsular polysac 29.1 2E+02 0.007 22.3 9.4 87 43-144 17-104 (166)
110 2ji4_A Phosphoribosyl pyrophos 28.9 28 0.00095 33.5 2.6 101 39-142 92-217 (379)
111 3auf_A Glycinamide ribonucleot 28.7 3E+02 0.01 24.1 10.9 104 23-140 20-124 (229)
112 1mjh_A Protein (ATP-binding do 27.9 84 0.0029 24.9 5.2 41 103-143 108-155 (162)
113 4dim_A Phosphoribosylglycinami 27.8 1.6E+02 0.0053 27.5 7.8 91 25-141 7-97 (403)
114 3u7q_B Nitrogenase molybdenum- 27.4 95 0.0033 31.0 6.4 36 106-143 429-467 (523)
115 3bpu_A Membrane-associated gua 26.8 45 0.0015 24.1 3.0 28 293-322 28-55 (88)
116 1vgv_A UDP-N-acetylglucosamine 26.8 98 0.0034 28.1 6.0 39 105-144 76-115 (384)
117 1iv0_A Hypothetical protein; r 26.7 92 0.0031 23.8 4.9 43 99-142 35-88 (98)
118 3h5n_A MCCB protein; ubiquitin 26.7 1.1E+02 0.0039 28.7 6.6 105 36-145 89-240 (353)
119 2kxh_B Peptide of FAR upstream 26.7 60 0.0021 19.7 2.9 27 241-267 1-30 (31)
120 2x5e_A UPF0271 protein PA4511; 26.0 67 0.0023 29.2 4.4 48 100-147 127-174 (252)
121 3m0z_A Putative aldolase; MCSG 25.6 36 0.0012 30.6 2.6 37 238-274 67-111 (249)
122 1jlj_A Gephyrin; globular alph 25.0 3E+02 0.01 23.3 8.4 54 82-139 49-104 (189)
123 1di6_A MOGA, molybdenum cofact 24.8 3.2E+02 0.011 23.3 9.2 40 99-138 50-91 (195)
124 3sho_A Transcriptional regulat 24.8 30 0.001 28.8 1.8 95 232-338 36-139 (187)
125 1ydo_A HMG-COA lyase; TIM-barr 24.4 2.4E+02 0.0082 25.9 8.2 63 72-138 161-224 (307)
126 3h5l_A Putative branched-chain 24.3 1.9E+02 0.0066 26.7 7.7 48 98-145 66-113 (419)
127 3olq_A Universal stress protei 24.2 1.9E+02 0.0067 25.5 7.5 106 24-143 6-146 (319)
128 2e5f_A Hypothetical protein PH 24.2 34 0.0012 31.7 2.3 47 291-338 79-127 (325)
129 2xed_A Putative maleate isomer 24.1 3.8E+02 0.013 23.8 10.8 68 74-145 164-239 (273)
130 4ds3_A Phosphoribosylglycinami 24.0 2.3E+02 0.0078 24.6 7.6 99 26-138 8-107 (209)
131 1xw8_A UPF0271 protein YBGL; N 23.7 85 0.0029 28.5 4.7 44 101-147 117-160 (252)
132 3op1_A Macrolide-efflux protei 23.7 1.8E+02 0.0061 27.0 7.1 84 39-127 32-135 (308)
133 3lp8_A Phosphoribosylamine-gly 23.5 74 0.0025 30.7 4.7 16 106-121 74-89 (442)
134 2p10_A MLL9387 protein; putati 23.4 1.1E+02 0.0036 28.4 5.3 80 44-133 153-246 (286)
135 3m6y_A 4-hydroxy-2-oxoglutarat 23.0 21 0.00072 32.5 0.5 35 239-273 90-132 (275)
136 2ego_A General receptor for ph 23.0 68 0.0023 23.6 3.4 35 288-322 33-67 (96)
137 2dum_A Hypothetical protein PH 22.7 1.1E+02 0.0039 24.3 5.1 41 103-143 105-152 (170)
138 3uf6_A LMO1369 protein; struct 22.6 1.9E+02 0.0065 26.5 7.0 93 13-126 5-97 (291)
139 3lrt_A Ribose-phosphate pyroph 22.6 1.3E+02 0.0046 27.5 6.0 101 39-143 58-180 (286)
140 3pdi_B Nitrogenase MOFE cofact 22.3 2E+02 0.0068 28.0 7.5 63 72-143 327-397 (458)
141 1y5e_A Molybdenum cofactor bio 22.1 3.1E+02 0.011 22.5 7.9 40 99-138 56-97 (169)
142 4gsl_A Ubiquitin-like modifier 21.9 2E+02 0.0069 29.4 7.6 37 58-96 326-362 (615)
143 1e2b_A Enzyme IIB-cellobiose; 21.8 1.4E+02 0.0049 22.8 5.2 86 236-353 5-103 (106)
144 3mjf_A Phosphoribosylamine--gl 21.8 88 0.003 30.0 4.8 10 23-32 1-10 (431)
145 2dfa_A Hypothetical UPF0271 pr 21.6 92 0.0032 28.2 4.5 43 101-146 122-164 (250)
146 2eaq_A LIM domain only protein 21.5 85 0.0029 22.6 3.7 32 291-322 27-58 (90)
147 3ga2_A Endonuclease V; alpha-b 21.4 53 0.0018 29.8 2.8 75 234-309 109-207 (246)
148 1v6t_A Hypothetical UPF0271 pr 21.1 96 0.0033 28.2 4.5 44 101-147 122-165 (255)
149 2nx9_A Oxaloacetate decarboxyl 21.1 4E+02 0.014 26.0 9.5 91 42-138 128-224 (464)
150 1w9e_A Syntenin 1; cell adhesi 21.0 65 0.0022 26.3 3.2 40 283-322 18-57 (166)
151 3rmj_A 2-isopropylmalate synth 21.0 3.4E+02 0.012 25.6 8.7 63 72-138 161-227 (370)
152 2pjk_A 178AA long hypothetical 20.7 2.3E+02 0.0079 23.7 6.7 60 73-138 45-106 (178)
153 3fj1_A Putative phosphosugar i 20.6 1.8E+02 0.006 27.1 6.5 96 233-338 41-143 (344)
154 2eeg_A PDZ and LIM domain prot 20.6 69 0.0024 23.4 3.0 31 292-322 32-62 (94)
155 2gm3_A Unknown protein; AT3G01 20.5 1.1E+02 0.0038 24.6 4.6 40 104-143 113-159 (175)
156 2q9v_A Membrane-associated gua 20.5 94 0.0032 22.3 3.7 29 294-322 29-58 (90)
157 3e17_A Tight junction protein 20.1 82 0.0028 22.9 3.3 36 287-322 16-52 (88)
No 1
>1efv_A Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 c.31.1.2 PDB: 2a1u_A* 1t9g_R* 2a1t_R*
Probab=100.00 E-value=1.4e-99 Score=731.74 Aligned_cols=314 Identities=49% Similarity=0.791 Sum_probs=281.3
Q ss_pred cceeEEEEEecCCccChHHHHHHHHHHhcCCCCcEEEEEEcCCCCHHHHHHHH-hhcCCCccEEEEEeCCCCCCCCHHHH
Q 018544 25 SISTLVLGEHENGSIKSQSLSAVEAAKSLSDDNSVSMLLAGSGPSFNEAVKHA-ASSHPSISQVLVADSDKFAYPIAEPW 103 (354)
Q Consensus 25 ~~~IlV~~E~~~g~l~~~slell~~A~~La~~~~V~avv~G~~~~~~~~a~~l-~~~~~GaD~V~~~~~~~l~~~~~e~~ 103 (354)
||++|||+||.+|+++++|+|+|++|++|+ ++|+++++|++ .++.++++ . .+|+|++|+++++.|++|+++.|
T Consensus 1 ~m~~lv~~e~~~g~l~~~~~eal~aA~~La--~~V~av~~G~~--~~~~~~~a~~--a~GaDkv~~v~d~~l~~~~~~~~ 74 (315)
T 1efv_A 1 MQSTLVIAEHANDSLAPITLNTITAATRLG--GEVSCLVAGTK--CDKVAQDLCK--VAGIAKVLVAQHDVYKGLLPEEL 74 (315)
T ss_dssp -CEEEEECCEETTEECTHHHHHHHHHHTTT--SEEEEEEEESC--CHHHHHHHHH--STTCCEEEEEECGGGTTCCHHHH
T ss_pred CceEEEEEEccCCCcCHHHHHHHHHHHHhc--CcEEEEEECCc--hHHHHHHHHH--hcCCCEEEEecCchhccCCHHHH
Confidence 688999999999999999999999999998 59999999987 56666666 5 69999999999999999999999
Q ss_pred HHHHHHHHHhcCccEEEeCCCCCccchHHHHHHHcCCCceeeeEEeeCCcEEEEEccCcEEEEEEEecCCCCEEEEEcCC
Q 018544 104 AKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDVIEISGSSQFVRPIYAGNALCTVRYTGANPCMLTVRAT 183 (354)
Q Consensus 104 a~aLa~li~~~~P~lVL~g~T~~GrdlaprlAarL~~~lvtdv~~l~~~~~~~R~~ygG~~~a~i~~~~~~p~v~Tvr~g 183 (354)
+++|++++++++|++||+|+|++||+++||||++|++|+++||++++.+.+++||+|||+.++++. +.+.|+|+|+|++
T Consensus 75 a~~La~li~~~~pdlVL~g~ts~G~~laprlAa~L~~~~vtdv~~l~~~~~~~R~~~gG~~~~tv~-~~~~p~viTVr~~ 153 (315)
T 1efv_A 75 TPLILATQKQFNYTHICAGASAFGKNLLPRVAAKLEVAPISDIIAIKSPDTFVRTIYAGNALCTVK-CDEKVKVFSVRGT 153 (315)
T ss_dssp HHHHHHHHHHHCCSEEEEESSHHHHHHHHHHHHHHTCCCEEEECEEEETTEEEEEETTTTEEEEEE-ECCSSEEEEECGG
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCcchHHHHHHHHhCCCccccEEEeccCCEEEEEcCCCEEEEEEE-eCCCCeEEEEcCC
Confidence 999999999999999999999999999999999999999999999986559999999999999999 5566789999999
Q ss_pred CCCCCCCCCCCCCCcceeeeecccccccCCCCceEEEEeeccCCCCCCCCCCcEEEEeCccCCChhcHHHHHHHHHHhCC
Q 018544 184 SFPMPKSSAESRSNGASISQVDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKMIEKLAEKLGA 263 (354)
Q Consensus 184 ~f~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~iVV~~GrG~~~~e~~~~~~~LA~~lga 263 (354)
.|+|.+. .. ++++ ++.++.. ......+++.....++++++|++|++|||||||++++|||+++++||++|||
T Consensus 154 ~f~~~~~-~~--~~~~-v~~~~~~----~~~~~~~~~~~~~~~~~~~~L~~A~ivVsgGrG~~~~e~f~~~~~LA~~Lga 225 (315)
T 1efv_A 154 SFDAAAT-SG--GSAS-SEKASST----SPVEISEWLDQKLTKSDRPELTGAKVVVSGGRGLKSGENFKLLYDLADQLHA 225 (315)
T ss_dssp GSCCCCS-SS--CCCE-EEECCCC----CCCCSEEEEEEEECCCCSCCGGGCSEEEEECGGGCSTGGGHHHHHHHHHHTC
T ss_pred CCCCCCC-CC--CCcc-eEEeccC----CCccceEEEEEEecccCCcCcCCCCEEEEcCCcCCChHHHHHHHHHHHHhCC
Confidence 9998665 22 2333 3323321 1123366554444446789999999999999999999999999999999999
Q ss_pred eecccHhhHhcCCCCCCceeccCCceeCCceEEEecccchhhhhhccCCCcEEEEEcCCCCCCcccccceEEeecHHHHH
Q 018544 264 AVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVI 343 (354)
Q Consensus 264 ~vG~SRp~vd~gw~p~~~qIGqtG~~V~P~lYia~GISGa~QH~~G~~~s~~IVAIN~D~~ApIf~~aDygiVgD~~~vl 343 (354)
+||||||+||+||+|+++|||||||+|+|+||||||||||+||++||++||+||||||||+||||++||||||||+|+|+
T Consensus 226 ~vgaSR~~vd~Gw~~~~~QVGqTGk~V~P~lYiA~GISGAiQHlaGm~~s~~IVAIN~D~~ApIf~~ADygiVgDl~~v~ 305 (315)
T 1efv_A 226 AVGASRAAVDAGFVPNDMQVGQTGKIVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVV 305 (315)
T ss_dssp EEEECHHHHHTTSSCGGGBBSTTSBCCCCSEEEEESCCCCHHHHTTTTTCSEEEEEESCTTCGGGGTCSEEEESCHHHHH
T ss_pred ceeecHHHHhCCCCCHHheeccCCcccCcceEEEecccCcHHHHhhcccCCEEEEEeCCCCCCcchhcCeEEeeeHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccC
Q 018544 344 PELLEKFPEK 353 (354)
Q Consensus 344 p~l~~~l~~~ 353 (354)
|+|+++||+|
T Consensus 306 P~L~~~l~~~ 315 (315)
T 1efv_A 306 PEMTEILKKK 315 (315)
T ss_dssp HHHHHHTC--
T ss_pred HHHHHHHhcC
Confidence 9999999764
No 2
>1o97_D Electron transferring flavoprotein alpha-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 c.31.1.2 PDB: 1o95_D* 1o96_B* 1o94_D* 3clu_D* 3clt_D* 3clr_D* 3cls_D*
Probab=100.00 E-value=1.2e-96 Score=712.78 Aligned_cols=310 Identities=26% Similarity=0.401 Sum_probs=273.8
Q ss_pred eeEEEEEecCCccChHHHHHHHHHHhcCC-C-CcEEEEEEcCCCCHHHHHHH-HhhcCCCccEEEEEeCCCCCCCCHHHH
Q 018544 27 STLVLGEHENGSIKSQSLSAVEAAKSLSD-D-NSVSMLLAGSGPSFNEAVKH-AASSHPSISQVLVADSDKFAYPIAEPW 103 (354)
Q Consensus 27 ~IlV~~E~~~g~l~~~slell~~A~~La~-~-~~V~avv~G~~~~~~~~a~~-l~~~~~GaD~V~~~~~~~l~~~~~e~~ 103 (354)
+||||+||.+|+++++++|+|++|++|++ + ++|+++++|++ .+ .+++ +. .+|+|++|+++++.| +|+++.|
T Consensus 2 ~ilv~~e~~~g~l~~~~~eal~~A~~L~e~g~~~V~av~~G~~--~~-~~~~~a~--a~GaDkv~~v~d~~l-~~~~~~~ 75 (320)
T 1o97_D 2 KILVIAEHRRNDLRPVSLELIGAANGLKKSGEDKVVVAVIGSQ--AD-AFVPALS--VNGVDELVVVKGSSI-DFDPDVF 75 (320)
T ss_dssp EEEEECCEETTEECTHHHHHHHHHHHHCSSTTCEEEEEEESTT--GG-GGHHHHC--BTTCSEEEEEECSCS-SCCHHHH
T ss_pred eEEEEEeCcCCCcCHHHHHHHHHHHHHhhCCCCcEEEEEECCc--HH-HHHHHHH--hcCCceEEEEeCccc-CCCHHHH
Confidence 58999999999999999999999999986 4 48999999987 56 6666 55 599999999999999 9999999
Q ss_pred HHHHHHHHHhcCccEEEeCCCCCccchHHHHHHHcCCCceeeeEEeeC-C--cEEEEEccCcEEEEEEEecCCC-CEEEE
Q 018544 104 AKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDVIEISG-S--SQFVRPIYAGNALCTVRYTGAN-PCMLT 179 (354)
Q Consensus 104 a~aLa~li~~~~P~lVL~g~T~~GrdlaprlAarL~~~lvtdv~~l~~-~--~~~~R~~ygG~~~a~i~~~~~~-p~v~T 179 (354)
+++|++++++++|++||+|+|++||+++||||++|++|+++||++++. + .+++||+|||+.++++. +.+. |+|+|
T Consensus 76 a~~La~~i~~~~pdlVL~g~ts~G~~laprlAa~L~~~~vtdv~~l~~~~~~l~~~R~~~gG~~~~ti~-~~~~~p~viT 154 (320)
T 1o97_D 76 EASVSALIAAHNPSVVLLPHSVDSLGYASSLASKTGYGFATDVYIVEYQGDELVATRGGYNQKVNVEVD-FPGKSTVVLT 154 (320)
T ss_dssp HHHHHHHHHHHCCSEEEEECSHHHHTTHHHHHHTSSCEEEEEECEEEEETTEEEEEEEETTTTEEEEEE-CTTCSCEEEE
T ss_pred HHHHHHHHHhcCCCEEEEeCCCchhhHHHHHHHHhCCCccccEEEEEecCCeEEEEEEcCCCEEEEEEE-ecCCCCEEEE
Confidence 999999999999999999999999999999999999999999999984 3 37999999999999999 4444 99999
Q ss_pred EcCCCCCCCCCCCCCCCCcceeeeecccccccCCCCceEEEEeeccC-CCCCCCCCCcEEEEeCccCCChhcHHHHHHHH
Q 018544 180 VRATSFPMPKSSAESRSNGASISQVDLSALDEDSIGKSRYVKHTSQD-AERPDLGSARIVVTGGRGLKSAENFKMIEKLA 258 (354)
Q Consensus 180 vr~g~f~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~L~~A~iVV~~GrG~~~~e~~~~~~~LA 258 (354)
+|++.|+|.+ .+ ++++ ++.++.. ......+++....++ +++++|++|++|||||||++++|||+++++||
T Consensus 155 Vr~~~f~~~~-~~---~~~~-v~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~A~ivVsgGRG~~~~e~f~~~~~LA 225 (320)
T 1o97_D 155 IRPSVFKPLE-GA---GSPV-VSNVDAP----SVQSRSQNKDYVEVGGGNDIDITTVDFIMSIGRGIGEETNVEQFRELA 225 (320)
T ss_dssp ECTTSSCCCC-SB---CCCE-EEEEECC----CCCCSEEEEEEECCC---CCCCSCSSEEEEECGGGCSGGGHHHHHHHH
T ss_pred EcCCCCCCCC-CC---CCcc-eEEeccC----CCcCceEEEEEEeccccCCcCcCCCCEEEEcCCccCChHHHHHHHHHH
Confidence 9999999763 22 2333 3323321 112336644433333 67899999999999999999999999999999
Q ss_pred HHhCCeecccHhhHhcCCCCCCceeccCCceeCC-ceEEEecccchhhhhhccCCCcEEEEEcCCCCCCcccccceEEee
Q 018544 259 EKLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAP-ELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVG 337 (354)
Q Consensus 259 ~~lga~vG~SRp~vd~gw~p~~~qIGqtG~~V~P-~lYia~GISGa~QH~~G~~~s~~IVAIN~D~~ApIf~~aDygiVg 337 (354)
++|||+||||||+||+||+|+++|||||||+|+| +||||||||||+||++||++||+||||||||+||||++|||||||
T Consensus 226 ~~Lga~vgaSR~~vd~Gw~~~~~QVGqTGk~V~P~~lYiA~GISGAiQHlaGm~~s~~IVAIN~D~~ApIF~~ADygiVg 305 (320)
T 1o97_D 226 DEAGATLCCSRPIADAGWLPKSRQVGQSGKVVGSCKLYVAMGISGSIQHMAGMKHVPTIIAVNTDPGASIFTIAKYGIVA 305 (320)
T ss_dssp HHHTCEEEECHHHHHTTSSCGGGBBSTTSBCCTTCSEEEEESCCCCHHHHHHHTTCSEEEEECSCTTCGGGGTCSEEECS
T ss_pred HHhCCceeecHHHHhCCCCChhhEeecCceEecccceEEEEeccCcHHHHhhcccCCEEEEEeCCCCCCcccccCeEEee
Confidence 9999999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHhhccc
Q 018544 338 DLFEVIPELLEKFPE 352 (354)
Q Consensus 338 D~~~vlp~l~~~l~~ 352 (354)
|+|+|+|+|+++||+
T Consensus 306 Dl~~vvP~L~~~l~~ 320 (320)
T 1o97_D 306 DIFDIEEELKAQLAA 320 (320)
T ss_dssp CHHHHHHHHHHHC--
T ss_pred eHHHHHHHHHHHHhC
Confidence 999999999999964
No 3
>1efp_A ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3 c.31.1.2
Probab=100.00 E-value=2.4e-96 Score=706.87 Aligned_cols=304 Identities=50% Similarity=0.781 Sum_probs=274.0
Q ss_pred eEEEEEecCCccC-hHHHHHHHHHHhcCCCCcEEEEEEcCCCCHHHH-HHHHhhcCCCccEEEEEeCCCCCCCCHHHHHH
Q 018544 28 TLVLGEHENGSIK-SQSLSAVEAAKSLSDDNSVSMLLAGSGPSFNEA-VKHAASSHPSISQVLVADSDKFAYPIAEPWAK 105 (354)
Q Consensus 28 IlV~~E~~~g~l~-~~slell~~A~~La~~~~V~avv~G~~~~~~~~-a~~l~~~~~GaD~V~~~~~~~l~~~~~e~~a~ 105 (354)
||||+||.+|+++ ++++|+|++|++| ++|+++++|++ .++. .+++. .+|+|++|+++++.|++|+++.|++
T Consensus 2 ilv~~e~~~g~l~~~~~~eal~aA~~L---g~V~av~~G~~--~~~~~~~~a~--a~GaDkv~~v~d~~l~~~~~~~~a~ 74 (307)
T 1efp_A 2 VLLLGEVTNGALNRDATAKAVAAVKAL---GDVTVLCAGAS--AKAAAEEAAK--IAGVAKVLVAEDALYGHRLAEPTAA 74 (307)
T ss_dssp EEEECCBSSSCBCHHHHHHHHHHHGGG---SCEEEEEEETT--CHHHHHHHHT--STTEEEEEEEECGGGTTCCHHHHHH
T ss_pred EEEEEeccCCEeCchhhHHHHHHHHHh---CCEEEEEECCc--hHHHHHHHHH--hcCCCEEEEecCchhccCCHHHHHH
Confidence 8999999999999 9999999999999 28999999987 4544 45555 5999999999999999999999999
Q ss_pred HHHHHHHhcCccEEEeCCCCCccchHHHHHHHcCCCceeeeEEeeCCcEEEEEccCcEEEEEEEecCCCCEEEEEcCCCC
Q 018544 106 LVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDVIEISGSSQFVRPIYAGNALCTVRYTGANPCMLTVRATSF 185 (354)
Q Consensus 106 aLa~li~~~~P~lVL~g~T~~GrdlaprlAarL~~~lvtdv~~l~~~~~~~R~~ygG~~~a~i~~~~~~p~v~Tvr~g~f 185 (354)
+|+++ +.+|++||+|+|++||+++||||++|++|+++||++++.+.+++||+|||+.+++++ +.+.|+|+|+|++.|
T Consensus 75 ~La~~--~~~pd~VL~g~ts~G~~laprlAa~L~~~~vtdv~~l~~~~~~~R~~~gG~~~~tv~-~~~~p~viTVr~~~f 151 (307)
T 1efp_A 75 LIVGL--AGDYSHIAAPATTDAKNVMPRVAALLDVMVLSDVSAILDADTFERPIYAGNAIQVVK-SKDAKKVFTIRTASF 151 (307)
T ss_dssp HHHHH--HTTCSEEEEESSHHHHHHHHHHHHHTTCCEEEEESEECSSSEEEEEEGGGTEEEEEE-ECSSSEEEEECGGGS
T ss_pred HHHHH--ccCCCEEEEeCCcchhhHHHHHHHHhCCCccccEEEEccCCEEEEECCCCEEEEEEE-eCCCCEEEEEcCCCC
Confidence 99999 558999999999999999999999999999999999986569999999999999999 566899999999999
Q ss_pred CCCCCCCCCCCCcceeeeecccccccCCCCceEEEEeeccCCCCCCCCCCcEEEEeCccCCChhcHHHHHHHHHHhCCee
Q 018544 186 PMPKSSAESRSNGASISQVDLSALDEDSIGKSRYVKHTSQDAERPDLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAV 265 (354)
Q Consensus 186 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~A~iVV~~GrG~~~~e~~~~~~~LA~~lga~v 265 (354)
+|.+ .+ ++++ ++.++.. ......++++....++++++|++|++|||||||++++|||+++++||++|||+|
T Consensus 152 ~~~~-~~---~~~~-v~~~~~~----~~~~~~~~~~~~~~~~~~~~L~~A~ivVsgGRG~~~~e~f~~~~~LA~~Lga~v 222 (307)
T 1efp_A 152 DAAG-EG---GTAP-VTETAAA----ADPGLSSWVADEVAESDRPELTSARRVVSGGRGLGSKESFAIIEELADKLGAAV 222 (307)
T ss_dssp CCCC-SS---CCCC-CBCCCCC----CCCCSEEEEEEEECCCCSCCTTTCSEEEEECGGGCSSSTTHHHHHHHHHHTCEE
T ss_pred CCCC-CC---CCcc-eEEeccc----cCcCceEEEEEEecccCCCCcCCCCEEEEcCCcCCCHHHHHHHHHHHHHhCCce
Confidence 9764 22 2222 2222221 112457777766566778999999999999999999999999999999999999
Q ss_pred cccHhhHhcCCCCCCceeccCCceeCCceEEEecccchhhhhhccCCCcEEEEEcCCCCCCcccccceEEeecHHHHHHH
Q 018544 266 GATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPE 345 (354)
Q Consensus 266 G~SRp~vd~gw~p~~~qIGqtG~~V~P~lYia~GISGa~QH~~G~~~s~~IVAIN~D~~ApIf~~aDygiVgD~~~vlp~ 345 (354)
|||||+||+||+|+++|||||||+|+|+||||||||||+||++||++||+||||||||+||||++||||||||+|+|+|+
T Consensus 223 gaSR~~vd~Gw~~~~~QVGqTGk~V~P~lYiA~GISGAiQHlaGm~~s~~IVAIN~D~~ApIF~~ADygiVgDl~~v~P~ 302 (307)
T 1efp_A 223 GASRAAVDSGYAPNDWQVGQTGKVVAPELYVAVGISGAIQHLAGMKDSKVIVAINKDEEAPIFQIADYGLVGDLFSVVPE 302 (307)
T ss_dssp EECHHHHHTTSSCGGGBBSSSSBCCCCSEEEEESCCCCHHHHTTTTTCSEEEEEESCTTCGGGGTCSEEEESCHHHHHHH
T ss_pred eecHHHHhCCCCChhhEeccCCcccCCceEEEEeccCcHHHHhhhccCCEEEEEeCCCCCCcccccCeEEeeeHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhc
Q 018544 346 LLEKF 350 (354)
Q Consensus 346 l~~~l 350 (354)
|+++|
T Consensus 303 L~~~l 307 (307)
T 1efp_A 303 LTGKL 307 (307)
T ss_dssp HHHTC
T ss_pred HHhhC
Confidence 99975
No 4
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.1e-37 Score=285.76 Aligned_cols=194 Identities=19% Similarity=0.268 Sum_probs=161.1
Q ss_pred cccceeEEEEEecCCccChHHHHHHHHHHhcCC--CCcEEEEEEcCCCCHHHHHHHHhhcCCCccEEEEEeCCCCCCCCH
Q 018544 23 SRSISTLVLGEHENGSIKSQSLSAVEAAKSLSD--DNSVSMLLAGSGPSFNEAVKHAASSHPSISQVLVADSDKFAYPIA 100 (354)
Q Consensus 23 ~~~~~IlV~~E~~~g~l~~~slell~~A~~La~--~~~V~avv~G~~~~~~~~a~~l~~~~~GaD~V~~~~~~~l~~~~~ 100 (354)
|.|++||||+||.+|+++++++|+|++|++|++ +++|++|++|++ .++.++++. .||+|+||+++++.|++|++
T Consensus 1 ~~m~~ilV~~E~~~g~l~~~s~ell~~A~~La~~~g~~v~av~~G~~--~~~~~~~~~--~~Gad~v~~v~~~~~~~~~~ 76 (217)
T 3ih5_A 1 SNANNLFVYCEIEEGIVADVSLELLTKGRSLANELNCQLEAVVAGTG--LKEIEKQIL--PYGVDKLHVFDAEGLYPYTS 76 (217)
T ss_dssp --CCCEEEECCEETTEECHHHHHHHHHHHHHHHHHTCCEEEEEEESC--CTTTHHHHG--GGTCSEEEEEECGGGSSCCH
T ss_pred CCcccEEEEEECcCCEECHHHHHHHHHHHHHHHhcCCeEEEEEECCC--HHHHHHHHH--hcCCCEEEEecCcccccCCH
Confidence 356789999999999999999999999999976 689999999987 567777887 58999999999999999999
Q ss_pred HHHHHHHHHHHHhcCccEEEeCCCCCccchHHHHHHHcCCCceeeeEEeeC--C------------cEEEEEccCcEEEE
Q 018544 101 EPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDVIEISG--S------------SQFVRPIYAGNALC 166 (354)
Q Consensus 101 e~~a~aLa~li~~~~P~lVL~g~T~~GrdlaprlAarL~~~lvtdv~~l~~--~------------~~~~R~~ygG~~~a 166 (354)
+.|+.+|++++++++|++||+|+|.+||+++||||++|++|+++||++|+. + .+++||+|||++++
T Consensus 77 ~~~a~~l~~~i~~~~p~~Vl~g~t~~G~~laprlAa~L~~~~~sdv~~l~~~~~~~~~~~~~~~~~l~~~Rp~~gG~~~a 156 (217)
T 3ih5_A 77 LPHTSILVNLFKEEQPQICLMGATVIGRDLGPRVSSALTSGLTADCTSLEIGDHEDKKEGKVYKNLLYQIRPAFGGNIVA 156 (217)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECSHHHHHHHHHHHHHTTCCCBCSCSEEEEEEEEETTTTEEEEEEEEEEEESSSSSCEE
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcchhhHHHHHHHHhCCCccceEEEEEecCCccccccccccccEEEEEECCCCEEEE
Confidence 999999999999999999999999999999999999999999999999973 2 47999999999999
Q ss_pred EEEecCCCCEEEEEcCCCCCCCCCCCCCCCCcceeeeecccccccCCCCceEEEEee
Q 018544 167 TVRYTGANPCMLTVRATSFPMPKSSAESRSNGASISQVDLSALDEDSIGKSRYVKHT 223 (354)
Q Consensus 167 ~i~~~~~~p~v~Tvr~g~f~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (354)
++.+...+|+|+||||++|++.+.+.++ +++ ++.++++....+.+.++++++..
T Consensus 157 ti~~~~~~p~v~TVr~~~f~~~~~~~~~--~~~-v~~~~~~~~~~~~~~~~~v~~~~ 210 (217)
T 3ih5_A 157 TIVNPEHRPQMATVREGVMKKEIVSPAY--QGE-VIRHDVKKYVADTDYVVKVIERH 210 (217)
T ss_dssp EECCSSSSSEEEEECTTSSCCCCSCTTC--CCE-EEECCHHHHHTTSCCCCCCC---
T ss_pred EEEecCCCCEEEEECCCCCCcCcCCCCC--Ccc-EEEecccccCCchhcceEEEEEE
Confidence 9995545899999999999998766532 333 33333221002234566666543
No 5
>3fet_A Electron transfer flavoprotein subunit alpha RELA protein; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: MSE; 2.05A {Thermoplasma acidophilum}
Probab=99.95 E-value=2.8e-27 Score=208.16 Aligned_cols=161 Identities=12% Similarity=0.139 Sum_probs=130.3
Q ss_pred ccceeEEEEEecCCccChHHHHHHHHHHhcCCCCcEEEEEEcCCCCHHHHHHHHhhcCCCccEEEEEeCCCCCCCCHHHH
Q 018544 24 RSISTLVLGEHENGSIKSQSLSAVEAAKSLSDDNSVSMLLAGSGPSFNEAVKHAASSHPSISQVLVADSDKFAYPIAEPW 103 (354)
Q Consensus 24 ~~~~IlV~~E~~~g~l~~~slell~~A~~La~~~~V~avv~G~~~~~~~~a~~l~~~~~GaD~V~~~~~~~l~~~~~e~~ 103 (354)
..|+||||+||.+ .++|+++.|+ + +++|+++++|++. . . .+|+|+||+++ + +. +++.|
T Consensus 2 ~~M~vlV~~E~~~-----~~~Ell~~ar--~-~g~v~av~~G~~~-~-------~--~~Gad~v~~v~-~--~~-~~e~~ 59 (166)
T 3fet_A 2 NAMKFLTVSDDMN-----FLRQVNTLVA--G-KGDMDSVIIGEGD-A-------K--GLGSKVLYRAK-K--GT-PFDAV 59 (166)
T ss_dssp CSEEEEEEESSHH-----HHHHHHHHHG--G-GEEEEEEEESCCC-C-------T--TCCCSEEEEEC-T--TC-CHHHH
T ss_pred CccEEEEEEcCcc-----HHHHHHHhhc--c-CCcEEEEEECcch-H-------H--HcCCCEEEEeC-C--CC-ChHHH
Confidence 4599999999864 7999999999 3 2589999999762 1 2 35999999998 4 33 88999
Q ss_pred HHHHHHHHHhcCccEEEeCCCCCccchHHHHHHHcCCCceeeeEEeeCC---cEEEEEccCcEEEEEEEecCCCCEEEEE
Q 018544 104 AKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDVIEISGS---SQFVRPIYAGNALCTVRYTGANPCMLTV 180 (354)
Q Consensus 104 a~aLa~li~~~~P~lVL~g~T~~GrdlaprlAarL~~~lvtdv~~l~~~---~~~~R~~ygG~~~a~i~~~~~~p~v~Tv 180 (354)
+++|+++++ +|++||+|+|.+||+++||||++|++|+++||++|+.+ ..++||+|||+.++++++ . .| |+|+
T Consensus 60 a~~l~~~~~--~p~~Vl~g~t~~g~~vaprlAa~L~~~~~sdv~~l~~~~~~~~~~R~~~gG~~~~tv~~-~-~p-v~Tv 134 (166)
T 3fet_A 60 SEGILKIAG--NYDYIAIGSTEVGREIAGYLSFKTGFYTATEIFSLEFNGQKAHTKRFFYGGKTVIEEES-D-AR-ILTV 134 (166)
T ss_dssp HHHHHHHHT--TCSEEEEECSHHHHHHHHHHHHHHCCCEEEEEEEEEESSSSEEEEEEEGGGTEEEEEEE-C-CC-EEEE
T ss_pred HHHHHHHHc--CCCEEEEcCCCccccHHHHHHHHhCCCceeeEEEEEecCCEEEEEEEccCCEEEEEEEe-C-CC-EEEE
Confidence 999999998 99999999999999999999999999999999999832 467999999999999984 4 57 9999
Q ss_pred cCCCCCCCCCCCCCCCCcceeeeecccccccCCCCceEEEEe
Q 018544 181 RATSFPMPKSSAESRSNGASISQVDLSALDEDSIGKSRYVKH 222 (354)
Q Consensus 181 r~g~f~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (354)
||+.|++.+... +++ ++.++. .+.+++++++
T Consensus 135 r~~~f~~~~~~~----~~~-v~~~~~------~~~~v~~~~~ 165 (166)
T 3fet_A 135 APGVIEAKDLGT----TPE-IRDLEI------GQSRIKITKF 165 (166)
T ss_dssp CTTSSCCCCCSC----CCE-EEECCC------CCCCCEEEEC
T ss_pred CCCCCCCCCCCC----Ccc-eEEEcc------CCCeEEEEec
Confidence 999999543222 333 333332 2567877653
No 6
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=99.92 E-value=1.6e-24 Score=203.94 Aligned_cols=148 Identities=14% Similarity=0.109 Sum_probs=129.2
Q ss_pred CCccChHHHHHHHHHHhcCC--CC--cEEEEEEcCCCCHHHHHHHHhhcCCCccEEEEEeCCCCCCCCHHHHHHHHHHHH
Q 018544 36 NGSIKSQSLSAVEAAKSLSD--DN--SVSMLLAGSGPSFNEAVKHAASSHPSISQVLVADSDKFAYPIAEPWAKLVHMIQ 111 (354)
Q Consensus 36 ~g~l~~~slell~~A~~La~--~~--~V~avv~G~~~~~~~~a~~l~~~~~GaD~V~~~~~~~l~~~~~e~~a~aLa~li 111 (354)
.+.++++++++|++|++|++ ++ +|+++++|+.. .++..+++. .+|+|++|+++++.|.+|+++.|+.+|++++
T Consensus 32 ~~~lnp~d~~ale~A~~Lke~~g~~~~V~av~~G~~~-~~~~lr~al--a~GaD~vi~v~d~~~~~~~~~~~a~~La~~i 108 (264)
T 1o97_C 32 MYDLNEWDDFSLEEAMKIKESSDTDVEVVVVSVGPDR-VDESLRKCL--AKGADRAVRVWDDAAEGSDAIVVGRILTEVI 108 (264)
T ss_dssp EEEECHHHHHHHHHHHHHHHHCSSCCEEEEEEESCGG-GHHHHHHHH--HTTCSEEEEECCGGGTTCCHHHHHHHHHHHH
T ss_pred CCccCHHHHHHHHHHHHHHHhcCCCceEEEEEeCchh-HHHHHHHHH--hcCCCEEEEEcCcccccCCHHHHHHHHHHHH
Confidence 45799999999999999975 35 89999999752 455566655 4899999999999999999999999999999
Q ss_pred HhcCccEEEeCCCCCc---cchHHHHHHHcCCCceeeeEEeeC--Cc---EEEEEccCcEEEEEEEecCCCCEEEEEcCC
Q 018544 112 QREKYSHIISASGSFG---KNVLPRAAALLDVSPITDVIEISG--SS---QFVRPIYAGNALCTVRYTGANPCMLTVRAT 183 (354)
Q Consensus 112 ~~~~P~lVL~g~T~~G---rdlaprlAarL~~~lvtdv~~l~~--~~---~~~R~~ygG~~~a~i~~~~~~p~v~Tvr~g 183 (354)
++.+||+||+|+++.| ++++||||++||+|+++||++++. +. +++|++|||+ +.++++ . .|+|+|++++
T Consensus 109 ~~~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~l~~~~~~~~~~~~R~i~gG~-~~~v~~-~-~P~vvTv~~~ 185 (264)
T 1o97_C 109 KKEAPDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVADLQYKPGDNKAVIRRELEGGM-LQEVEI-N-CPAVLTIQLG 185 (264)
T ss_dssp HHHCCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEEEECCTTCSEEEEEEECGGGC-EEEEEE-E-SSCEEEECTT
T ss_pred HhcCCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceEEEEEecCCCeEEEEEEcCCCc-EEEEEE-C-CCEEEEEeCC
Confidence 9999999999999965 789999999999999999999985 43 7899999998 677773 3 7899999999
Q ss_pred CCCCCC
Q 018544 184 SFPMPK 189 (354)
Q Consensus 184 ~f~~~~ 189 (354)
.|+|.-
T Consensus 186 ~~~pR~ 191 (264)
T 1o97_C 186 INKPRY 191 (264)
T ss_dssp SSCCTT
T ss_pred CCCcCC
Confidence 998753
No 7
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=99.91 E-value=1.7e-23 Score=195.54 Aligned_cols=148 Identities=16% Similarity=0.119 Sum_probs=127.0
Q ss_pred cCCccChHHHHHHHHHHhcCC-CC--cEEEEEEcCCCCHHHHHHHHhhcCCCccEEEEEe-CCCC-CCCCHHHHHHHHHH
Q 018544 35 ENGSIKSQSLSAVEAAKSLSD-DN--SVSMLLAGSGPSFNEAVKHAASSHPSISQVLVAD-SDKF-AYPIAEPWAKLVHM 109 (354)
Q Consensus 35 ~~g~l~~~slell~~A~~La~-~~--~V~avv~G~~~~~~~~a~~l~~~~~GaD~V~~~~-~~~l-~~~~~e~~a~aLa~ 109 (354)
....++++++++|++|++|++ ++ +|+++++|++. .++..+++. .+|+|++|+++ ++.| ++++++.|+.+|++
T Consensus 31 ~~~~lnp~d~~Ale~A~~Lke~g~~~~V~av~~G~~~-a~~~lr~al--a~GaD~vi~v~~d~~~~~~~~~~~~a~~La~ 107 (252)
T 1efp_B 31 VKMSMNPFDEIAVEEAIRLKEKGQAEEIIAVSIGVKQ-AAETLRTAL--AMGADRAILVVAADDVQQDIEPLAVAKILAA 107 (252)
T ss_dssp CCEEECHHHHHHHHHHHHHHTTTSCSEEEEEEEESGG-GHHHHHHHH--HHTCSEEEEEECCSSTTCCCCHHHHHHHHHH
T ss_pred CCccCCHHHHHHHHHHHHHHhcCCCceEEEEEeCChh-HHHHHHHHH--hcCCCEEEEEecChhhcccCCHHHHHHHHHH
Confidence 355699999999999999976 45 89999999752 455555555 38999999999 9999 89999999999999
Q ss_pred HHHhcCccEEEeCCCCCc---cchHHHHHHHcCCCceeeeEEeeCC---cEEEEEccCcEEEEEEEecCCCCEEEEEcCC
Q 018544 110 IQQREKYSHIISASGSFG---KNVLPRAAALLDVSPITDVIEISGS---SQFVRPIYAGNALCTVRYTGANPCMLTVRAT 183 (354)
Q Consensus 110 li~~~~P~lVL~g~T~~G---rdlaprlAarL~~~lvtdv~~l~~~---~~~~R~~ygG~~~a~i~~~~~~p~v~Tvr~g 183 (354)
++++.+||+||+|+++.+ ++++||||++||+|+++||++++.+ .+++|++|||.. ++++ ..|+|+|++++
T Consensus 108 ~i~~~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~l~~~~~~~~v~R~i~gG~~--~v~~--~~P~vvTv~~~ 183 (252)
T 1efp_B 108 VARAEGTELIIAGKQAIDNDMNATGQMLAAILGWAQATFASKVEIEGAKAKVTREVDGGLQ--TIAV--SLPAVVTADLR 183 (252)
T ss_dssp HHHHHTCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEEEEEECSSEEEEEEEETTEEE--EEEE--ESSEEEEECTT
T ss_pred HHHhcCCCEEEEcCCccCCchhhHHHHHHHHhCCCccccEEEEEEcCCeEEEEEEcCCcEE--EEEE--CCCEEEEEeCC
Confidence 999999999999999854 8999999999999999999999843 478999999954 4552 27899999999
Q ss_pred CCCCCC
Q 018544 184 SFPMPK 189 (354)
Q Consensus 184 ~f~~~~ 189 (354)
.|+|.-
T Consensus 184 ~~~pR~ 189 (252)
T 1efp_B 184 LNEPRY 189 (252)
T ss_dssp SCCCCC
T ss_pred CCCcCC
Confidence 998753
No 8
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=99.90 E-value=2.2e-23 Score=195.12 Aligned_cols=145 Identities=17% Similarity=0.119 Sum_probs=124.9
Q ss_pred ccChHHHHHHHHHHhcCC-CC--cEEEEEEcCCCCHHHHHHHHhhcCCCccEEEEEe-CCCC-CCCCHHHHHHHHHHHHH
Q 018544 38 SIKSQSLSAVEAAKSLSD-DN--SVSMLLAGSGPSFNEAVKHAASSHPSISQVLVAD-SDKF-AYPIAEPWAKLVHMIQQ 112 (354)
Q Consensus 38 ~l~~~slell~~A~~La~-~~--~V~avv~G~~~~~~~~a~~l~~~~~GaD~V~~~~-~~~l-~~~~~e~~a~aLa~li~ 112 (354)
.++++++++|++|++|++ ++ +|+++++|++. .++..+++. .+|+|++|+++ ++.| ++++++.|+.+|+++++
T Consensus 37 ~lnp~d~~Ale~A~~Lke~g~~~~V~av~~G~~~-a~~~lr~al--a~GaD~vi~v~~d~~~~~~~~~~~~A~~La~~i~ 113 (255)
T 1efv_B 37 SMNPFCEIAVEEAVRLKEKKLVKEVIAVSCGPAQ-CQETIRTAL--AMGADRGIHVEVPPAEAERLGPLQVARVLAKLAE 113 (255)
T ss_dssp EECHHHHHHHHHHHHHHHTTSCSEEEEEEEESTT-HHHHHHHHH--HHTCSEEEEEECCHHHHTTCCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHhcCCCceEEEEEeCChh-HHHHHHHHH--hcCCCEEEEEecChhhcccCCHHHHHHHHHHHHH
Confidence 489999999999999975 44 89999999853 455566655 48999999999 9888 88999999999999999
Q ss_pred hcCccEEEeCCCCCc---cchHHHHHHHcCCCceeeeEEeeCC---cEEEEEccCcEEEEEEEecCCCCEEEEEcCCCCC
Q 018544 113 REKYSHIISASGSFG---KNVLPRAAALLDVSPITDVIEISGS---SQFVRPIYAGNALCTVRYTGANPCMLTVRATSFP 186 (354)
Q Consensus 113 ~~~P~lVL~g~T~~G---rdlaprlAarL~~~lvtdv~~l~~~---~~~~R~~ygG~~~a~i~~~~~~p~v~Tvr~g~f~ 186 (354)
+.+||+||+|+++.| ++++||||++||+|+++||++++.+ .+++|++|||.. ++++ ..|+|+|++++.|+
T Consensus 114 ~~~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v~~l~~~~~~~~v~R~i~gG~~--~v~~--~~P~VvTv~~~~~~ 189 (255)
T 1efv_B 114 KEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQVTLEGDKLKVEREIDGGLE--TLRL--KLPAVVTADLRLNE 189 (255)
T ss_dssp HHTCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEEEEEETTEEEEEEEETTEEE--EEEE--ESSEEEEECGGGCC
T ss_pred hcCCCEEEEeCcccCCchhhHHHHHHHHhCCCcccceEEEEEcCCeEEEEEEcCCcEE--EEEE--CCCEEEEEeCCCCC
Confidence 999999999999865 8999999999999999999999732 479999999954 4552 27899999999998
Q ss_pred CCC
Q 018544 187 MPK 189 (354)
Q Consensus 187 ~~~ 189 (354)
|.-
T Consensus 190 pR~ 192 (255)
T 1efv_B 190 PRY 192 (255)
T ss_dssp CCC
T ss_pred cCC
Confidence 853
No 9
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=96.19 E-value=0.049 Score=55.58 Aligned_cols=113 Identities=20% Similarity=0.212 Sum_probs=79.9
Q ss_pred cEEEEeCccCCChhcHHHHHHHHHHhCCeecccHhhHhcCCCCCC---ceeccCCce--------e-CCceEEEecc---
Q 018544 236 RIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPND---LQVGQTGKI--------V-APELYMAFGV--- 300 (354)
Q Consensus 236 ~iVV~~GrG~~~~e~~~~~~~LA~~lga~vG~SRp~vd~gw~p~~---~qIGqtG~~--------V-~P~lYia~GI--- 300 (354)
+-+|-+|.|....+..+.+.+||+++|.-|-+|-. -.|.+|.+ ..+|..|.. + .+++-|++|-
T Consensus 209 rpvil~G~g~~~~~a~~~l~~lae~~~~Pv~~t~~--~kg~~~~~~p~~~~G~~g~~~~~~~~~~l~~aDlvl~lG~~~~ 286 (566)
T 1ozh_A 209 NPIFLLGLMASQPENSKALRRLLETSHIPVTSTYQ--AAGAVNQDNFSRFAGRVGLFNNQAGDRLLQLADLVICIGYSPV 286 (566)
T ss_dssp SEEEEECGGGGSGGGHHHHHHHHHHHCCCEEECGG--GTTTCCTTTCTTEEEECSSBTTCHHHHHHHHCSEEEEESCCGG
T ss_pred CeEEEECCCcccccHHHHHHHHHHHHCCCEEEccc--cCCcCCCCChHhhcCCCcccCCHHHHHHHHhCCEEEEECCCCC
Confidence 46777777877677788999999999999977633 45666643 467665532 2 3599999995
Q ss_pred cchhhhhhccCCCcEEEEEcCCCCCC-cccccceEEeecHHHHHHHHHhhccc
Q 018544 301 SGAIQHLAGMRDSKVIVAVNKDADAP-IFQVADYGLVGDLFEVIPELLEKFPE 352 (354)
Q Consensus 301 SGa~QH~~G~~~s~~IVAIN~D~~Ap-If~~aDygiVgD~~~vlp~l~~~l~~ 352 (354)
++...... .....+|-||.|+.-- =+...|+.|++|+.+++.+|++.++.
T Consensus 287 ~~~~~~~~--~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l~~ 337 (566)
T 1ozh_A 287 EYEPAMWN--SGNATLVHIDVLPAYEERNYTPDVELVGDIAGTLNKLAQNIDH 337 (566)
T ss_dssp GSCGGGTC--CSCSEEEEEESSCCCCBTTBCCSEEEESCHHHHHHHHHHTCCS
T ss_pred cCCccccC--CCCCcEEEEeCCHHHhCCCCCCCEEEEeCHHHHHHHHHHhccc
Confidence 44332221 2234678899998632 13458999999999999999988753
No 10
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=95.69 E-value=0.086 Score=54.18 Aligned_cols=112 Identities=14% Similarity=0.260 Sum_probs=77.3
Q ss_pred EEEEeCccCCChhcHHHHHHHHHHhCCeecccHhhHhcCCCCC--CceeccCCce---------eCCceEEEecccchh-
Q 018544 237 IVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPN--DLQVGQTGKI---------VAPELYMAFGVSGAI- 304 (354)
Q Consensus 237 iVV~~GrG~~~~e~~~~~~~LA~~lga~vG~SRp~vd~gw~p~--~~qIGqtG~~---------V~P~lYia~GISGa~- 304 (354)
-+|-.|.|. .+..+.+.+||+++|.-|-.|-. -.|.+|. ...+|..|.. =.++|.|++|-.=..
T Consensus 215 PvIl~G~g~--~~a~~~l~~lae~~~~PV~~t~~--gkg~~~~~hp~~~G~~g~~~~~~~~~~l~~aDlvl~iG~~~~~~ 290 (603)
T 4feg_A 215 PLIYYGIGA--RKAGKELEQLSKTLKIPLMSTYP--AKGIVADRYPAYLGSANRVAQKPANEALAQADVVLFVGNNYPFA 290 (603)
T ss_dssp EEEEECGGG--TTCHHHHHHHHHHHTCCEEECGG--GTTSSCTTCTTBCCCCSSSSCHHHHHHHHHCSEEEEESCCCTTT
T ss_pred eEEEECCCc--hhHHHHHHHHHHHHCCCEEEcCc--cccCCCCCChhhcccCcccCcHHHHHHHHhCCEEEEECCCCCcc
Confidence 455566676 34678899999999999988843 3466664 3467777642 248999999974221
Q ss_pred hhhhccCCCcEEEEEcCCCCCC-cccccceEEeecHHHHHHHHHhhccc
Q 018544 305 QHLAGMRDSKVIVAVNKDADAP-IFQVADYGLVGDLFEVIPELLEKFPE 352 (354)
Q Consensus 305 QH~~G~~~s~~IVAIN~D~~Ap-If~~aDygiVgD~~~vlp~l~~~l~~ 352 (354)
+++.-......+|-||.||.-- =....|++|++|+.++|.+|++.++.
T Consensus 291 ~~~~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~D~~~~l~~L~~~l~~ 339 (603)
T 4feg_A 291 EVSKAFKNTRYFLQIDIDPAKLGKRHKTDIAVLADAQKTLAAILAQVSE 339 (603)
T ss_dssp TTTTTTTTCSEEEEEESCGGGTTSSSCCSEEEESCHHHHHHHHHHTCCC
T ss_pred cccccCCCCCeEEEEeCCHHHhCCccCCCEEEEeCHHHHHHHHHHhhhc
Confidence 2222233345688899988532 12357999999999999999998764
No 11
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=95.67 E-value=0.049 Score=55.71 Aligned_cols=115 Identities=17% Similarity=0.156 Sum_probs=74.9
Q ss_pred CcEEEEeCccCCChhcHHHHHHHHHHhCCeecccHhhHhcCCCC--CCceeccCCce---------eCCceEEEeccc--
Q 018544 235 ARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVP--NDLQVGQTGKI---------VAPELYMAFGVS-- 301 (354)
Q Consensus 235 A~iVV~~GrG~~~~e~~~~~~~LA~~lga~vG~SRp~vd~gw~p--~~~qIGqtG~~---------V~P~lYia~GIS-- 301 (354)
-+-+|-.|.|... +..+.+.+||+++|.-|-+|-- -..|-+| +...+|..|.. -.++|-|.+|-.
T Consensus 224 ~rPvIl~G~g~~~-~~~~~l~~lae~~~~PV~~t~~-~~~~~~~~~hp~~~g~~~~~~~~~~~~~~~~aDlvl~~G~~~~ 301 (578)
T 3lq1_A 224 KKGVFVVGPIDKK-ELEQPMVDLAKKLGWPILADPL-SGLRSYGALDEVVIDQYDAFLKEAEIIDKLTPEVVIRFGSMPV 301 (578)
T ss_dssp SCEEEEECSCCCT-TCHHHHHHHHHHHTCCEEECGG-GSTTSBSSCCSSEECCHHHHTTSHHHHHHTCCSEEEEESSCCS
T ss_pred CCeEEEECCCCCh-HHHHHHHHHHHhcCcEEEEecC-CCCCCCCCCCccccccHHHHhcCccccccCCCCEEEEeCCccc
Confidence 3455556667654 3458899999999998877511 1122223 34567754432 269999999963
Q ss_pred -chhh-hhhccCCCcEEEEEcCCCCCC-cccccceEEeecHHHHHHHHHhhccc
Q 018544 302 -GAIQ-HLAGMRDSKVIVAVNKDADAP-IFQVADYGLVGDLFEVIPELLEKFPE 352 (354)
Q Consensus 302 -Ga~Q-H~~G~~~s~~IVAIN~D~~Ap-If~~aDygiVgD~~~vlp~l~~~l~~ 352 (354)
.... +..-.. ...+|-||.|+.-. -+...|++|++|+.+++.+|++.+++
T Consensus 302 ~~~~~~~~~~~~-~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l~~ 354 (578)
T 3lq1_A 302 SKPLKNWLEQLS-DIRFYVVDPGAAWKDPIKAVTDMIHCDERFLLDIMQQNMPD 354 (578)
T ss_dssp CHHHHHHHHHCC-SSEEEEECTTCCCCCTTCCCSEEECSCHHHHHHHHHHHSCS
T ss_pred chhHHHHHhcCC-CCEEEEECCCCCcCCCCcCceEEEEeCHHHHHHHHHhhccC
Confidence 2222 322222 34678899998521 13457999999999999999987754
No 12
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=95.37 E-value=0.1 Score=53.38 Aligned_cols=109 Identities=21% Similarity=0.320 Sum_probs=75.8
Q ss_pred cEEEEeCccCCChhcHHHHHHHHHHhCCeecccHhhHhcCCCCCC--ceeccCCce---------eCCceEEEeccc---
Q 018544 236 RIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPND--LQVGQTGKI---------VAPELYMAFGVS--- 301 (354)
Q Consensus 236 ~iVV~~GrG~~~~e~~~~~~~LA~~lga~vG~SRp~vd~gw~p~~--~qIGqtG~~---------V~P~lYia~GIS--- 301 (354)
+-+|-+|.|....+ +.+.+||+++|.-|-+|- --.|.+|.+ ..+|..|.. -.+++-|++|..
T Consensus 216 rpvIl~G~g~~~~~--~~l~~lae~~~~Pv~~t~--~g~g~~~~~hp~~~G~~g~~~~~~~~~~l~~aDlvl~iG~~~~~ 291 (590)
T 1ybh_A 216 KPVLYVGGGCLNSS--DELGRFVELTGIPVASTL--MGLGSYPADDELSLHMLGMHGTVYANYAVEHSDLLLAFGVRFDD 291 (590)
T ss_dssp SEEEEECGGGTTCH--HHHHHHHHHHCCCEEECT--TTTTSSCTTSTTEEEECSTTSCHHHHHHHHHCSEEEEESCCCCH
T ss_pred CcEEEECcccccCH--HHHHHHHHHhCCCEEEch--hhcCcCCCCCchhcCCcccccCHHHHHHHHhCCEEEEEcCCCCc
Confidence 35555666766544 899999999999998872 245667644 567776632 247999999963
Q ss_pred ---chhhhhhccCCCcEEEEEcCCCCCC-cccccceEEeecHHHHHHHHHhhcc
Q 018544 302 ---GAIQHLAGMRDSKVIVAVNKDADAP-IFQVADYGLVGDLFEVIPELLEKFP 351 (354)
Q Consensus 302 ---Ga~QH~~G~~~s~~IVAIN~D~~Ap-If~~aDygiVgD~~~vlp~l~~~l~ 351 (354)
|.... ...-..+|-||.||.-- -+...|++|++|+.+++.+|++.++
T Consensus 292 ~~~~~~~~---~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l~ 342 (590)
T 1ybh_A 292 RVTGKLEA---FASRAKIVHIDIDSAEIGKNKTPHVSVCGDVKLALQGMNKVLE 342 (590)
T ss_dssp HHHSSGGG---TTTTSEEEEEESCTTTTTSSSCCSEEEESCHHHHHHHHHHHHH
T ss_pred cccCcccc---cCCCCeEEEEECCHHHhCCCcCCCeEEecCHHHHHHHHHHhhh
Confidence 32221 22233578899998541 2346799999999999999988775
No 13
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=95.35 E-value=0.047 Score=56.00 Aligned_cols=114 Identities=24% Similarity=0.345 Sum_probs=78.4
Q ss_pred cEEEEeCccCCChhcHHHHHHHHHHhCCeecccHhhHhcCCCCCC--ceeccCCce---------eCCceEEEecccchh
Q 018544 236 RIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPND--LQVGQTGKI---------VAPELYMAFGVSGAI 304 (354)
Q Consensus 236 ~iVV~~GrG~~~~e~~~~~~~LA~~lga~vG~SRp~vd~gw~p~~--~qIGqtG~~---------V~P~lYia~GISGa~ 304 (354)
+-+|-+|.|....+..+.+.+||+++|.-|-+|- --.|.+|.+ ..+|..|.. =.+++-|.+|-.=..
T Consensus 207 rpvIl~G~g~~~~~a~~~l~~lae~~~~Pv~~t~--~~~g~~~~~~p~~~G~~g~~~~~~~~~~l~~aDlvl~iG~~~~~ 284 (589)
T 2pgn_A 207 NPVILAGGGVARSGGSEALLKLAEMVGVPVVTTS--TGAGVFPETHALAMGSAGFCGWKSANDMMAAADFVLVLGSRLSD 284 (589)
T ss_dssp SEEEEECHHHHHHTCHHHHHHHHHHHTCCEEECT--TTTTSSCTTSTTEEEECSTTSCHHHHHHHHHCSEEEEESCCCCT
T ss_pred CeEEEECCCcccccHHHHHHHHHHHhCCCEEEcc--ccCccCCCCChhhcCCccccCCHHHHHHHhhCCEEEEECCCccc
Confidence 4566677777656677899999999999987773 345666644 477876632 247999999963211
Q ss_pred hhh--hccCCCcEEEEEcCCCCC-CcccccceEEeecHHHHHHHHHhhcc
Q 018544 305 QHL--AGMRDSKVIVAVNKDADA-PIFQVADYGLVGDLFEVIPELLEKFP 351 (354)
Q Consensus 305 QH~--~G~~~s~~IVAIN~D~~A-pIf~~aDygiVgD~~~vlp~l~~~l~ 351 (354)
-++ ........+|-||.|+.- .=+...|+.|++|+.+++.+|++.++
T Consensus 285 ~~~~~~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l~ 334 (589)
T 2pgn_A 285 WGIAQGYITKMPKFVHVDTDPAVLGTFYFPLLSVVADAKTFMEQLIEVLP 334 (589)
T ss_dssp TTTTTTTTCCCCSEEEEESCGGGTTSSSCCSEEEECCHHHHHHHHHHHGG
T ss_pred ccccccccCCCCeEEEEeCCHHHHCCCcCCCEEEEeCHHHHHHHHHHHhh
Confidence 121 112122357779999842 22345799999999999999998875
No 14
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=95.35 E-value=0.039 Score=56.12 Aligned_cols=114 Identities=11% Similarity=0.181 Sum_probs=79.2
Q ss_pred cEEEEeCccCCChhcHHHHHHHHHHhCCeecccHhhHhcCCCCC--CceeccCCc-ee-CCceEEEecccchhhhhhc--
Q 018544 236 RIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPN--DLQVGQTGK-IV-APELYMAFGVSGAIQHLAG-- 309 (354)
Q Consensus 236 ~iVV~~GrG~~~~e~~~~~~~LA~~lga~vG~SRp~vd~gw~p~--~~qIGqtG~-~V-~P~lYia~GISGa~QH~~G-- 309 (354)
+-+|-+|.|....+..+.+.+||+++|.-|-+|--. .|.+|. ...+|..+. .+ .++|-|++|-.=......|
T Consensus 213 rpvIl~G~g~~~~~a~~~l~~lae~~~~Pv~~t~~~--~g~~~~~hp~~~G~~~~~~l~~aDlvl~iG~~~~~~~~~~~~ 290 (564)
T 2q28_A 213 RPLIILGKGAAYSQADEQLREFIESAQIPFLPMSMA--KGILEDTHPLSAAAARSFALANADVVMLVGARLNWLLAHGKK 290 (564)
T ss_dssp SEEEEECHHHHHHTCHHHHHHHHHHHTCCEEECGGG--TTSSCTTCTTBCGGGHHHHHHHCSEEEEESCCCSGGGGGGTT
T ss_pred CcEEEECcccccccHHHHHHHHHHHhCCCEEeccCc--cccCCCCChhhcChHHHhHhhcCCEEEEECCccccccccccc
Confidence 456666777765567789999999999998877642 456653 446787653 23 6899999997532111112
Q ss_pred -cCCCcEEEEEcCCCCC-CcccccceEEeecHHHHHHHHHhhcc
Q 018544 310 -MRDSKVIVAVNKDADA-PIFQVADYGLVGDLFEVIPELLEKFP 351 (354)
Q Consensus 310 -~~~s~~IVAIN~D~~A-pIf~~aDygiVgD~~~vlp~l~~~l~ 351 (354)
...-..||-||.||.- --+...|++|++|+.+++.+|++.++
T Consensus 291 ~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l~ 334 (564)
T 2q28_A 291 GWAADTQFIQLDIEPQEIDSNRPIAVPVVGDIASSMQGMLAELK 334 (564)
T ss_dssp TSCTTCEEEEEESCGGGTTSSSCCSEEEESCHHHHHHHHHHHHH
T ss_pred ccCCCCeEEEEeCCHHHhcCCCCCCeEEEcCHHHHHHHHHHHhh
Confidence 2223457789998852 12345799999999999999998775
No 15
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=95.08 E-value=0.059 Score=54.91 Aligned_cols=115 Identities=19% Similarity=0.197 Sum_probs=79.4
Q ss_pred cEEEEeCccCCChhcHHHHHHHHHHhCCeecccHhhHhcCCCCC--CceeccCCc-ee-CCceEEEecccchhhhhhc--
Q 018544 236 RIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPN--DLQVGQTGK-IV-APELYMAFGVSGAIQHLAG-- 309 (354)
Q Consensus 236 ~iVV~~GrG~~~~e~~~~~~~LA~~lga~vG~SRp~vd~gw~p~--~~qIGqtG~-~V-~P~lYia~GISGa~QH~~G-- 309 (354)
+-+|-+|.|....+..+.+.+||+++|.-|-+|-- -.|.+|+ ...+|..+. .+ .+++-|++|-.=......|
T Consensus 215 rpvIl~G~g~~~~~a~~~l~~lae~~~~Pv~~t~~--~~g~~~~~~p~~~G~~~~~~l~~aDlvl~iG~~~~~~~~~~~~ 292 (568)
T 2c31_A 215 RPVIMLGKGAAYAQCDDEIRALVEETGIPFLPMGM--AKGLLPDNHPQSAAATRAFALAQCDVCVLIGARLNWLMQHGKG 292 (568)
T ss_dssp SEEEEECHHHHHHTCHHHHHHHHHHHTCCEEECGG--GTTSSCTTCTTBCGGGHHHHHHHCSEEEEESCCCSGGGGGGCS
T ss_pred CCEEEECcccccccHHHHHHHHHHHhCCCEEeccc--ccccCCCCChhhcchHHHhhhccCCEEEEECCCCccccccCcc
Confidence 45666777776556678999999999999887764 3456653 447787653 23 6899999997432211222
Q ss_pred --cC-CCcEEEEEcCCCCCC-cccccceEEeecHHHHHHHHHhhccc
Q 018544 310 --MR-DSKVIVAVNKDADAP-IFQVADYGLVGDLFEVIPELLEKFPE 352 (354)
Q Consensus 310 --~~-~s~~IVAIN~D~~Ap-If~~aDygiVgD~~~vlp~l~~~l~~ 352 (354)
+. ....||-||.||.-. -+...|++|++|+.+++.+|++.++.
T Consensus 293 ~~~~~~~~~ii~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l~~ 339 (568)
T 2c31_A 293 KTWGDELKKYVQIDIQANEMDSNQPIAAPVVGDIKSAVSLLRKALKG 339 (568)
T ss_dssp GGGTTSCCEEEEEESCGGGTTSSSCCSEEEESCHHHHHHHHHHHHTT
T ss_pred cccCCCCCeEEEEeCCHHHhcCCcCCCceeeCCHHHHHHHHHHhhhh
Confidence 22 234577799988531 23457999999999999999987753
No 16
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=94.82 E-value=0.071 Score=54.42 Aligned_cols=114 Identities=18% Similarity=0.251 Sum_probs=77.8
Q ss_pred cEEEEeCccCCChhcHHHHHHHHHHhCCeecccHhhHhcCCCCC--CceeccC-----C---c-----ee-CCceEEEec
Q 018544 236 RIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPN--DLQVGQT-----G---K-----IV-APELYMAFG 299 (354)
Q Consensus 236 ~iVV~~GrG~~~~e~~~~~~~LA~~lga~vG~SRp~vd~gw~p~--~~qIGqt-----G---~-----~V-~P~lYia~G 299 (354)
+-+|-+|.|....+..+.+.+||+++|.-|-+|- --.|.+|. ...+|.. | . .+ .+++-|.+|
T Consensus 218 rpvIl~G~g~~~~~a~~~l~~lae~~~~Pv~~t~--~~~g~~~~~hp~~~G~~~~~~~g~~~~~~~~~~l~~aDlvl~iG 295 (573)
T 2iht_A 218 HPVLVVGAAAIRSGAVPAIRALAERLNIPVITTY--IAKGVLPVGHELNYGAVTGYMDGILNFPALQTMFAPVDLVLTVG 295 (573)
T ss_dssp SEEEEECHHHHHTTCHHHHHHHHHHHTCCEEECS--TTTTSSCTTCTTEEEECCTTHHHHHTSCHHHHHHTTCCEEEEET
T ss_pred CeEEEECCCccccCHHHHHHHHHHHHCCeEEEec--ccCccCCCCCcCccCccccccCCCCCCHHHHHHHhhCCEEEEEC
Confidence 3566666676655677899999999999987762 24566654 3456654 3 2 12 579999999
Q ss_pred cc--chhhhhhcc-C-CCcEEEEEcCCCCCC-cccccceEEeecHHHHHHHHHhhccc
Q 018544 300 VS--GAIQHLAGM-R-DSKVIVAVNKDADAP-IFQVADYGLVGDLFEVIPELLEKFPE 352 (354)
Q Consensus 300 IS--Ga~QH~~G~-~-~s~~IVAIN~D~~Ap-If~~aDygiVgD~~~vlp~l~~~l~~ 352 (354)
-. ...+ +... . ....+|-||.|+.-- =+...|++|++|+.+++++|.+.++.
T Consensus 296 ~~~~~~~~-~~~~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l~~ 352 (573)
T 2iht_A 296 YDYAEDLR-PSMWQKGIEKKTVRISPTVNPIPRVYRPDVDVVTDVLAFVEHFETATAS 352 (573)
T ss_dssp CCGGGCCC-HHHHCCSSCCEEEEEESSCCSCTTTCCCSEEEESCHHHHHHHHHHHTTT
T ss_pred CCcccccc-ccccCCCCCCeEEEEeCCHHHhCCCcCCCeeEeCCHHHHHHHHHHhccc
Confidence 65 2211 2122 1 234678899998532 13357999999999999999988753
No 17
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=94.77 E-value=0.081 Score=55.35 Aligned_cols=112 Identities=18% Similarity=0.283 Sum_probs=76.6
Q ss_pred EEEEeCccCC-ChhcHHHHHHHHHHhCCeecccHhhHhcCCCCCCc-----eeccCCce------eCCceEEEeccc---
Q 018544 237 IVVTGGRGLK-SAENFKMIEKLAEKLGAAVGATRAVVDAGFVPNDL-----QVGQTGKI------VAPELYMAFGVS--- 301 (354)
Q Consensus 237 iVV~~GrG~~-~~e~~~~~~~LA~~lga~vG~SRp~vd~gw~p~~~-----qIGqtG~~------V~P~lYia~GIS--- 301 (354)
-+|-+|.|+. +.+..+.+.+||+++|.-|-+| .--.|.+|.++ .+|..|.. =.++|.|++|..
T Consensus 292 PvIl~G~g~~~~~~~~~~l~~lae~~~~PV~tt--~~gkg~~~~~hpl~lG~~G~~g~~~~~~~l~~aDlvl~iG~r~~~ 369 (677)
T 1t9b_A 292 PVLYVGAGILNHADGPRLLKELSDRAQIPVTTT--LQGLGSFDQEDPKSLDMLGMHGCATANLAVQNADLIIAVGARFDD 369 (677)
T ss_dssp EEEEECGGGGGSTTHHHHHHHHHHHTTCCEEEC--GGGTTSSCTTSTTEEEECSTTSCHHHHHHHHHCSEEEEESCCCCT
T ss_pred eEEEECcccccCchhHHHHHHHHHHhCCCeeec--cccCccCCCCCccccCcCCccCcHHHHHHHhcCCEEEEECCccCc
Confidence 4444566764 3345688999999999999888 45667888765 34444432 258999999964
Q ss_pred ---chhhhhhccCCCc--------EEEEEcCCCCCC-cccccceEEeecHHHHHHHHHhhccc
Q 018544 302 ---GAIQHLAGMRDSK--------VIVAVNKDADAP-IFQVADYGLVGDLFEVIPELLEKFPE 352 (354)
Q Consensus 302 ---Ga~QH~~G~~~s~--------~IVAIN~D~~Ap-If~~aDygiVgD~~~vlp~l~~~l~~ 352 (354)
|...... .+++ .||-|+.||+-- -+...|+.|++|+..++..|++.++.
T Consensus 370 ~~t~~~~~~~--~~~~~~~~~~~~~iI~idid~~~~~~~~~~~~~i~gD~~~~l~~L~~~l~~ 430 (677)
T 1t9b_A 370 RVTGNISKFA--PEARRAAAEGRGGIIHFEVSPKNINKVVQTQIAVEGDATTNLGKMMSKIFP 430 (677)
T ss_dssp TTSCSGGGSS--HHHHHHHHTTSCEEEEEESCGGGSSSSSCCSEEEESCHHHHHHHHHTTSCC
T ss_pred ccccCccccC--cccccccccCCceEEEEECCHHHhCCcccCCEEEeCCHHHHHHHHHHHhhc
Confidence 3332211 1222 278899988631 13457999999999999999988753
No 18
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=94.59 E-value=0.15 Score=51.70 Aligned_cols=114 Identities=22% Similarity=0.253 Sum_probs=75.4
Q ss_pred CCCc-EEEEeCccCCChhcHHHHHHHHHHhCCeecccHhhHhcCCCC--CCceeccCCce---------eCCceEEEecc
Q 018544 233 GSAR-IVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVP--NDLQVGQTGKI---------VAPELYMAFGV 300 (354)
Q Consensus 233 ~~A~-iVV~~GrG~~~~e~~~~~~~LA~~lga~vG~SRp~vd~gw~p--~~~qIGqtG~~---------V~P~lYia~GI 300 (354)
.+|+ -+|-+|.|.. +..+.+.+||+++|.-|-.|-.. .|.+| |...+|..|.. -.++|-|++|.
T Consensus 199 ~~A~rpvIl~G~g~~--~a~~~l~~lae~~~~Pv~~t~~g--kg~~~~~hp~~~G~~G~~~~~~~~~~~~~aDlvl~iG~ 274 (549)
T 3eya_A 199 RYSSNIALMCGSGCA--GAHKELVEFAGKIKAPIVHALRG--KEHVEYDNPYDVGMTGLIGFSSGFHTMMNADTLVLLGT 274 (549)
T ss_dssp HTCCSEEEEECGGGT--TCHHHHHHHHHHHTCCEEECGGG--HHHHSSSCTTBCCCCSTTSCHHHHHHHHHCSEEEEESC
T ss_pred HhCCCcEEEECCCch--HHHHHHHHHHHHhCCCEEECCcc--CcCCCCCCcccccCCCCCCCHHHHHHHHhCCEEEEECC
Confidence 3443 4555667763 45678999999999988776432 12222 34456655532 25899999997
Q ss_pred cchhhhhhccCCCcEEEEEcCCCCCC-cccccceEEeecHHHHHHHHHhhccc
Q 018544 301 SGAIQHLAGMRDSKVIVAVNKDADAP-IFQVADYGLVGDLFEVIPELLEKFPE 352 (354)
Q Consensus 301 SGa~QH~~G~~~s~~IVAIN~D~~Ap-If~~aDygiVgD~~~vlp~l~~~l~~ 352 (354)
+=.. ..-+.....+|-||.||.-- -....|.+|++|+.+++.+|++.++.
T Consensus 275 ~~~~--~~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l~~ 325 (549)
T 3eya_A 275 QFPY--RAFYPTDAKIIQIDINPASIGAHSKVDMALVGDIKSTLRALLPLVEE 325 (549)
T ss_dssp CCCC--GGGSCSSSEEEEEESCGGGTTSSSCCSEEEECCHHHHHHHHGGGSCC
T ss_pred CCCc--cccCCCCCeEEEEeCCHHHhCCCCCCCeEEEeCHHHHHHHHHHhccc
Confidence 5321 12233445688899998631 12356999999999999999988764
No 19
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=94.47 E-value=0.16 Score=52.11 Aligned_cols=113 Identities=12% Similarity=0.055 Sum_probs=72.6
Q ss_pred cEEEEeCccCCChhcHHHHHHHHHHhCCeecccHhhHhcCCCC--CCceeccCC---------ceeCCceEEEeccc---
Q 018544 236 RIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVP--NDLQVGQTG---------KIVAPELYMAFGVS--- 301 (354)
Q Consensus 236 ~iVV~~GrG~~~~e~~~~~~~LA~~lga~vG~SRp~vd~gw~p--~~~qIGqtG---------~~V~P~lYia~GIS--- 301 (354)
+-||-+|.|. ..+..+.+.+||+++|.-|-+|--.-. +..| +...+|..| ..+.+++-|++|-.
T Consensus 245 rPvIl~G~g~-~~~a~~~l~~lae~~~~PV~~t~~~~~-~~~~~~~p~~~g~~~~~~~~~~~~~~~~~Dlvl~iG~~~~~ 322 (604)
T 2x7j_A 245 KGMIVCGELH-SDADKENIIALSKALQYPILADPLSNL-RNGVHDKSTVIDAYDSFLKDDELKRKLRPDVVIRFGPMPVS 322 (604)
T ss_dssp SEEEEECCCC-CHHHHHHHHHHHHHHTCCEEECGGGTT-TBSSSCCTTEECCHHHHTTSHHHHHHHCCSEEEEESSCCSC
T ss_pred CeEEEECCCC-cHHHHHHHHHHHHhcCceEEEcccccc-cccCCCCcceechHHHHhcCchhhhhcCCCEEEEECCcCcc
Confidence 3555566676 456678999999999998876632110 1112 223555433 13568999999964
Q ss_pred chh-hhhhccCCCcEEEEEcCCCCCCc-ccccceEEeecHHHHHHHHHhhcc
Q 018544 302 GAI-QHLAGMRDSKVIVAVNKDADAPI-FQVADYGLVGDLFEVIPELLEKFP 351 (354)
Q Consensus 302 Ga~-QH~~G~~~s~~IVAIN~D~~ApI-f~~aDygiVgD~~~vlp~l~~~l~ 351 (354)
... ++.....+. .+|-|+.||.--= +..+|+.|++|+.+++.+|++.++
T Consensus 323 ~~~~~~~~~~~~~-~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l~ 373 (604)
T 2x7j_A 323 KPVFLWLKDDPTI-QQIVIDEDGGWRDPTQASAHMIHCNASVFAEEIMAGLT 373 (604)
T ss_dssp HHHHHHHHHCTTS-EEEEECTTCCCCCTTSCCSEEECSCHHHHHHHHHHTSC
T ss_pred HHHHHHHhhCCCC-eEEEECCCCCccCCCccceEEEEcCHHHHHHHHHHhhc
Confidence 222 232222233 5777999985321 335799999999999999998874
No 20
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=94.36 E-value=0.096 Score=53.27 Aligned_cols=115 Identities=19% Similarity=0.206 Sum_probs=78.1
Q ss_pred cEEEEeCccCCChhcHHHHHHHHHHhCCeecccHhhHhcCCCCC---CceeccCC--c-----eeCCceEEEecccchhh
Q 018544 236 RIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPN---DLQVGQTG--K-----IVAPELYMAFGVSGAIQ 305 (354)
Q Consensus 236 ~iVV~~GrG~~~~e~~~~~~~LA~~lga~vG~SRp~vd~gw~p~---~~qIGqtG--~-----~V~P~lYia~GISGa~Q 305 (354)
+-+|-.|.|....+..+.+.+||+.+|.-|-+|-. -.|.+|. ...+|..| . .-.+++-|++|-.=...
T Consensus 206 rpvil~G~g~~~~~a~~~l~~lae~~~~Pv~~t~~--~~g~~~~~~~p~~~G~~g~~~~~~~~~~~aDlvl~iG~~~~~~ 283 (563)
T 2uz1_A 206 RPVIVLGSEASRTARKTALSAFVAATGVPVFADYE--GLSMLSGLPDAMRGGLVQNLYSFAKADAAPDLVLMLGARFGLN 283 (563)
T ss_dssp SEEEEECHHHHHHTCHHHHHHHHHHHCCCEEECGG--GGGGGTTSCGGGEEEEGGGGGGTTTTTCCCSEEEEESCCSSGG
T ss_pred CcEEEECCccccccHHHHHHHHHHHhCCcEEEcCc--ccCcCCCCCChhhcCCCCCCCHHHHhhcCCCEEEEECCCCccc
Confidence 46777777876666778999999999998877643 2355553 35666554 1 23579999999642222
Q ss_pred hhhcc---CC-CcEEEEEcCCCCCC-cccccceEEeecHHHHHHHHHhhccc
Q 018544 306 HLAGM---RD-SKVIVAVNKDADAP-IFQVADYGLVGDLFEVIPELLEKFPE 352 (354)
Q Consensus 306 H~~G~---~~-s~~IVAIN~D~~Ap-If~~aDygiVgD~~~vlp~l~~~l~~ 352 (354)
.+... .. -..+|-||.||.-- -+...|+.|++|+.+++.+|++.++.
T Consensus 284 ~~~~~~~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l~~ 335 (563)
T 2uz1_A 284 TGHGSGQLIPHSAQVIQVDPDACELGRLQGIALGIVADVGGTIEALAQATAQ 335 (563)
T ss_dssp GTTTSCSSSCTTSEEEEECSCGGGTTSSSCCSEEECSCHHHHHHHHHHHHTT
T ss_pred ccccccccCCCCCeEEEEECCHHHhCCCCCCCeEEEcCHHHHHHHHHHhhhh
Confidence 22211 11 24678899998421 13367999999999999999987753
No 21
>1s5p_A NAD-dependent deacetylase; protein deacetylase, SIR2 homologue, hydrolase; HET: ALY; 1.96A {Escherichia coli} SCOP: c.31.1.5
Probab=93.71 E-value=0.064 Score=48.76 Aligned_cols=58 Identities=24% Similarity=0.389 Sum_probs=44.3
Q ss_pred ceEEEecccchhhhhhcc-----CCCcEEEEEcCCCCCCcccccceEEeecHHHHHHHHHhhcc
Q 018544 293 ELYMAFGVSGAIQHLAGM-----RDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKFP 351 (354)
Q Consensus 293 ~lYia~GISGa~QH~~G~-----~~s~~IVAIN~D~~ApIf~~aDygiVgD~~~vlp~l~~~l~ 351 (354)
+|+|.+|.|+.++=.+++ +.-..+|-||.+|. +.-+.+|+.|-+|+-++||+|.++|.
T Consensus 169 dl~lviGTSl~V~Pa~~l~~~a~~~g~~~i~iN~~~t-~~~~~~~~~i~~~~~~~l~~l~~~l~ 231 (235)
T 1s5p_A 169 DIFIAIGTSGHVYPAAGFVHEAKLHGAHTVELNLEPS-QVGNEFAEKYYGPASQVVPEFVEKLL 231 (235)
T ss_dssp SEEEEESCCTTEETGGGHHHHHHHTTCEEEEEESSSC-C---CCSEEEESCHHHHHHHHHHHHH
T ss_pred CEEEEECcCCchhhHHHHHHHHHHcCCeEEEEECCCC-CCCccccEEEeCCHHHHHHHHHHHHH
Confidence 799999999988655543 11245778999984 66778999999999999999998875
No 22
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=93.63 E-value=0.15 Score=52.36 Aligned_cols=111 Identities=23% Similarity=0.369 Sum_probs=75.7
Q ss_pred cEEEEeCccCCChhcHHHHHHHHHHhCCeecccHhhHhcCCCCCC--ceeccCCcee----------CCceEEEeccc--
Q 018544 236 RIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPND--LQVGQTGKIV----------APELYMAFGVS-- 301 (354)
Q Consensus 236 ~iVV~~GrG~~~~e~~~~~~~LA~~lga~vG~SRp~vd~gw~p~~--~qIGqtG~~V----------~P~lYia~GIS-- 301 (354)
+-+|-+|.|+...+..+.+.+||+++|+-|-+|-.. .|.+|.+ ..+|..|..- .+++-|.+|-.
T Consensus 228 rpvil~G~g~~~~~a~~~l~~lae~~~~PV~~t~~~--~g~~~~~hp~~~G~~g~~~~~~~~~~~l~~aDlvl~iG~~~~ 305 (616)
T 2pan_A 228 RPVIVAGGGVINADAAALLQQFAELTSVPVIPTLMG--WGCIPDDHELMAGMVGLQTAHRYGNATLLASDMVFGIGNRFA 305 (616)
T ss_dssp SEEEEECHHHHHTTCHHHHHHHHHHHTCCEEECTTT--TTSSCTTSTTBCCCCSSSSCCHHHHHHHHHCSEEEEESCCCC
T ss_pred CeEEEECCCcCcccHHHHHHHHHHHhCCCEEEcccc--CccCCCCCccccCCccccCCHHHHHHHHHhCCEEEEECCCCc
Confidence 345556777765567789999999999999877433 4556543 4566665432 46999999964
Q ss_pred ----chhhhhhccCCCcEEEEEcCCCCC-CcccccceEEeecHHHHHHHHHhhcc
Q 018544 302 ----GAIQHLAGMRDSKVIVAVNKDADA-PIFQVADYGLVGDLFEVIPELLEKFP 351 (354)
Q Consensus 302 ----Ga~QH~~G~~~s~~IVAIN~D~~A-pIf~~aDygiVgD~~~vlp~l~~~l~ 351 (354)
|...... .+. .+|-||.||.- .=....|+.+++|+.+++.+|++.++
T Consensus 306 ~~~~~~~~~~~--~~~-~~i~id~d~~~~~~~~~~~~~i~~D~~~~l~~L~~~l~ 357 (616)
T 2pan_A 306 NRHTGSVEKYT--EGR-KIVHIDIEPTQIGRVLCPDLGIVSDAKAALTLLVEVAQ 357 (616)
T ss_dssp HHHHSSHHHHH--TTC-EEEEEESCGGGTTSSSCCSSCEECCHHHHHHHHHHHHH
T ss_pred ccccCcccccC--CCC-eEEEEeCCHHHhCCCCCCCeEEEcCHHHHHHHHHHHhh
Confidence 3332221 233 47789999842 11235799999999999999988754
No 23
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=93.57 E-value=0.36 Score=49.40 Aligned_cols=112 Identities=21% Similarity=0.227 Sum_probs=76.4
Q ss_pred cEEEEeCccCCChhcHHHHHHHHHHhCCeecccHhhHhcCCCC--CCceeccCCce---------eCCceEEEecccchh
Q 018544 236 RIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVP--NDLQVGQTGKI---------VAPELYMAFGVSGAI 304 (354)
Q Consensus 236 ~iVV~~GrG~~~~e~~~~~~~LA~~lga~vG~SRp~vd~gw~p--~~~qIGqtG~~---------V~P~lYia~GISGa~ 304 (354)
+-++-+|.|+ . +..+.+.+||+++|.-|-+|- .-.|.+| |...+|..|.. =.+++-|++|-.=..
T Consensus 207 rpvil~G~g~-~-~a~~~l~~lae~~~~Pv~~t~--~g~g~~~~~~p~~~G~~g~~g~~~~~~~l~~aDlvl~iG~~~~~ 282 (590)
T 1v5e_A 207 RPVIYAGIGT-M-GHGPAVQELARKIKAPVITTG--KNFETFEWDFEALTGSTYRVGWKPANETILEADTVLFAGSNFPF 282 (590)
T ss_dssp SEEEEECGGG-T-TCHHHHHHHHHHHTCCEEECT--TCGGGSCTTCTTEEEESSSSSCHHHHHHHHHCSEEEEESCCCTT
T ss_pred CeEEEEcCch-h-HHHHHHHHHHHHHCCCEEEcc--ccCcCCCCCChhhCccCcccCCHHHHHHHHhCCEEEEECCCCcc
Confidence 4566667777 6 778899999999999988772 2345554 34577877632 257999999963221
Q ss_pred hhhhc--cCCCcEEEEEcCCCCCC-cccccceEEeecHHHHHHHHHhhccc
Q 018544 305 QHLAG--MRDSKVIVAVNKDADAP-IFQVADYGLVGDLFEVIPELLEKFPE 352 (354)
Q Consensus 305 QH~~G--~~~s~~IVAIN~D~~Ap-If~~aDygiVgD~~~vlp~l~~~l~~ 352 (354)
..+.| ..+. .+|-||.|+.-- =+...|+.+++|+.+++.+|++.++.
T Consensus 283 ~~~~~~~~~~~-~~i~id~d~~~~~~~~~~~~~i~gd~~~~l~~L~~~l~~ 332 (590)
T 1v5e_A 283 SEVEGTFRNVD-NFIQIDIDPAMLGKRHHADVAILGDAALAIDEILNKVDA 332 (590)
T ss_dssp TTTTTTTTTCS-EEEEEESCGGGTTSSSCCSEEEESCHHHHHHHHHHHSCC
T ss_pred hhccccCCCCC-eEEEEeCCHHHHCCCcCCCeEEEcCHHHHHHHHHHhhcc
Confidence 11000 2344 577799887421 13457999999999999999987753
No 24
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=93.53 E-value=0.089 Score=53.03 Aligned_cols=114 Identities=17% Similarity=0.126 Sum_probs=75.2
Q ss_pred cEEEEeCccCCChhcHHHHHHHHHHhCCee-cccHhhHhcCCCCC--CceeccCCc-------e-eCCceEEEecccchh
Q 018544 236 RIVVTGGRGLKSAENFKMIEKLAEKLGAAV-GATRAVVDAGFVPN--DLQVGQTGK-------I-VAPELYMAFGVSGAI 304 (354)
Q Consensus 236 ~iVV~~GrG~~~~e~~~~~~~LA~~lga~v-G~SRp~vd~gw~p~--~~qIGqtG~-------~-V~P~lYia~GISGa~ 304 (354)
+-+|-.|.|....+..+.+.+||+++|.-| .-|- -..|.+|+ ...+|..|. . =.+++-|.+|-.=..
T Consensus 202 rpvil~G~g~~~~~a~~~l~~lae~~~~Pv~~~~~--~g~g~~~~~~p~~~G~~g~~~~~~~~~l~~aDlvl~iG~~~~~ 279 (528)
T 1q6z_A 202 NPAIVLGPDVDAANANADCVMLAERLKAPVWVAPS--APRCPFPTRHPCFRGLMPAGIAAISQLLEGHDVVLVIGAPVFR 279 (528)
T ss_dssp SCEEEECHHHHHTTCHHHHHHHHHHHTCCEEECSS--CSBCCSCTTSTTEEEECCSCHHHHHHHHTTCSEEEEESSCTTC
T ss_pred CeEEEECCccchhhHHHHHHHHHHHHCCCEEEecc--CccccCCCCCccccCcCCCCcHHHHHHHhcCCEEEEECCCCcc
Confidence 346666677655567789999999999888 4432 12345554 347777761 1 257999999964222
Q ss_pred hhhhc----cCCCcEEEEEcCCCCCCc-ccccceEEeecHHHHHHHHHhhccc
Q 018544 305 QHLAG----MRDSKVIVAVNKDADAPI-FQVADYGLVGDLFEVIPELLEKFPE 352 (354)
Q Consensus 305 QH~~G----~~~s~~IVAIN~D~~ApI-f~~aDygiVgD~~~vlp~l~~~l~~ 352 (354)
.++.+ ......+|-||.|+.--= . ..|++|++|+.+++.+|++.++.
T Consensus 280 ~~~~~~~~~~~~~~~~i~id~d~~~~~~~-~~~~~i~~d~~~~l~~L~~~~~~ 331 (528)
T 1q6z_A 280 YHQYDPGQYLKPGTRLISVTCDPLEAARA-PMGDAIVADIGAMASALANLVEE 331 (528)
T ss_dssp CCSCCCSCSSCTTCEEEEEESCHHHHHHC-SSSEEEESCHHHHHHHHHHHSCC
T ss_pred ccccCcCCcCCCCCeEEEEeCCHHHhCCC-CCCeeEeCCHHHHHHHHHHHhhc
Confidence 22222 222346788999874110 1 57999999999999999988753
No 25
>1ma3_A SIR2-AF2, transcriptional regulatory protein, SIR2 family; enzyme-substrate complex, protein binding, transcription; HET: ALY MES; 2.00A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1s7g_A* 1yc2_A*
Probab=93.39 E-value=0.051 Score=49.96 Aligned_cols=61 Identities=20% Similarity=0.319 Sum_probs=47.8
Q ss_pred CceEEEecccchhhhhhcc-----CCCcEEEEEcCCCCCCcccccceEEeecHHHHHHHHHhhcccC
Q 018544 292 PELYMAFGVSGAIQHLAGM-----RDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKFPEK 353 (354)
Q Consensus 292 P~lYia~GISGa~QH~~G~-----~~s~~IVAIN~D~~ApIf~~aDygiVgD~~~vlp~l~~~l~~~ 353 (354)
.+|+|.+|-|+.++=.+++ +.-..+|-||.++. ++-+.+|+.|-+|+.++||+|.+.|++.
T Consensus 184 adl~lviGTSl~V~P~~~l~~~a~~~g~~~i~iN~~~~-~~d~~~~~~i~~~~~~~l~~l~~~l~~~ 249 (253)
T 1ma3_A 184 CDAFMVVGSSLVVYPAAELPYIAKKAGAKMIIVNAEPT-MADPIFDVKIIGKAGEVLPKIVEEVKRL 249 (253)
T ss_dssp CSEEEEESCCSCEETGGGHHHHHHHHTCEEEEEESSCC-TTGGGCSEEEESCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCceeccHHHHHHHHHHcCCeEEEEeCCCC-CCCCceeEEEeCCHHHHHHHHHHHHHHH
Confidence 3799999999888765555 11234778999875 5567889999999999999999887753
No 26
>1q1a_A HST2 protein; ternary complex, histone deacetylase, 2'-O-ADP ribose,, gene regulation; HET: ALY OAD; 1.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 PDB: 1szd_A* 1szc_A* 2od7_A* 2od9_A* 2qqf_A* 2qqg_A* 1q17_A* 2od2_A*
Probab=92.83 E-value=0.1 Score=48.92 Aligned_cols=61 Identities=18% Similarity=0.108 Sum_probs=46.4
Q ss_pred CCceEEEecccchhhhhhcc----CCCcEEEEEcCCCCCCc---ccccceEEeecHHHHHHHHHhhcc
Q 018544 291 APELYMAFGVSGAIQHLAGM----RDSKVIVAVNKDADAPI---FQVADYGLVGDLFEVIPELLEKFP 351 (354)
Q Consensus 291 ~P~lYia~GISGa~QH~~G~----~~s~~IVAIN~D~~ApI---f~~aDygiVgD~~~vlp~l~~~l~ 351 (354)
+.+|+|.+|.|+.++=.+++ +....+|.||.+|..++ -+.+|+.|-||+-+++|.|.+.|.
T Consensus 211 ~~DlllviGTSl~V~Pa~~l~~~~~~~~~~v~IN~~~~~~~~~~~~~~d~~i~~~~~~~l~~l~~~l~ 278 (289)
T 1q1a_A 211 QQPLVIVVGTSLAVYPFASLPEEIPRKVKRVLCNLETVGDFKANKRPTDLIVHQYSDEFAEQLVEELG 278 (289)
T ss_dssp CCCEEEEESCCCCEETTTHHHHHSCTTSEEEEESSSCCTHHHHSCCTTCEEECCCHHHHHHHHHHHHT
T ss_pred cCCEEEEEccCCChhhHHHHHHHHhcCCCEEEEECCCcccCCCCCcceeEEEeCCHHHHHHHHHHHcC
Confidence 56899999999988754444 32334667999987532 235899999999999999998774
No 27
>1yc5_A NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, SIRT1, nicotinamide, hydrolase; HET: ALY; 1.40A {Thermotoga maritima} SCOP: c.31.1.5 PDB: 2h2d_A* 2h2f_A 2h2g_A* 2h2h_A* 2h2i_A* 2h4f_A* 2h4j_A* 3d4b_A* 3d81_A* 3pdh_A* 2h4h_A* 3jr3_A* 2h59_A*
Probab=91.83 E-value=0.15 Score=46.65 Aligned_cols=58 Identities=22% Similarity=0.256 Sum_probs=46.5
Q ss_pred ceEEEecccchhhhhhcc-----CCCcEEEEEcCCCCCCcccccceEEeecHHHHHHHHHhhcc
Q 018544 293 ELYMAFGVSGAIQHLAGM-----RDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKFP 351 (354)
Q Consensus 293 ~lYia~GISGa~QH~~G~-----~~s~~IVAIN~D~~ApIf~~aDygiVgD~~~vlp~l~~~l~ 351 (354)
+|.|.+|-|+.++-.+++ +.-..+|-||.+|. ++-+.+|+.|-+|+.++||+|.++|.
T Consensus 182 dl~lviGTSl~V~P~~~l~~~a~~~g~~~i~IN~~~~-~~d~~~~~~i~~~~~~~l~~l~~~lg 244 (246)
T 1yc5_A 182 SLMIVLGSSLVVYPAAELPLITVRSGGKLVIVNLGET-PFDDIATLKYNMDVVEFARRVMEEGG 244 (246)
T ss_dssp SEEEEESCCSCEETGGGHHHHHHHHTCEEEEECSSCC-TTGGGCSEEECSCHHHHHHHHHHHHT
T ss_pred CEEEEECCCCcchhHHHHHHHHHHcCCeEEEEeCCCC-CCCcceeEEEeCCHHHHHHHHHHHcC
Confidence 799999999888766665 11345778999875 55678899999999999999998764
No 28
>1m2k_A Silent information regulator 2; protein-ligand complex, gene regulation; HET: APR; 1.47A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1m2g_A* 1m2h_A* 1m2j_A* 1m2n_A* 1ici_A*
Probab=91.71 E-value=0.19 Score=45.96 Aligned_cols=59 Identities=29% Similarity=0.509 Sum_probs=46.5
Q ss_pred ceEEEecccchhhhhhcc-----CCCcEEEEEcCCCCCCcccccceEEeecHHHHHHHHHhhccc
Q 018544 293 ELYMAFGVSGAIQHLAGM-----RDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKFPE 352 (354)
Q Consensus 293 ~lYia~GISGa~QH~~G~-----~~s~~IVAIN~D~~ApIf~~aDygiVgD~~~vlp~l~~~l~~ 352 (354)
+|+|.+|-|+.++-.+++ +.-..+|-||.++. ++-+.+|+.|-+|+.++||+|.+.|++
T Consensus 179 dlllviGTSl~V~P~~~l~~~a~~~g~~~i~IN~~~~-~~d~~~~~~i~~~~~~~l~~l~~~l~~ 242 (249)
T 1m2k_A 179 DVIIVAGTSAVVQPAASLPLIVKQRGGAIIEINPDET-PLTPIADYSLRGKAGEVMDELVRHVRK 242 (249)
T ss_dssp SEEEEESCCSCSTTGGGHHHHHHHTTCEEEEECSSCC-TTGGGCSEEECSCHHHHHHHHHHHHHH
T ss_pred CEEEEEccCCCccchHHHHHHHHHcCCeEEEEeCCCC-CCCcceeEEEeCCHHHHHHHHHHHHHH
Confidence 799999999988755542 12334777999875 456788999999999999999998764
No 29
>2hjh_A NAD-dependent histone deacetylase SIR2; protein, sirtuin, acetyl-ADP-ribose, nicotinamide, hydrolase; HET: XYQ; 1.85A {Saccharomyces cerevisiae}
Probab=90.81 E-value=0.32 Score=46.87 Aligned_cols=59 Identities=17% Similarity=0.206 Sum_probs=47.0
Q ss_pred CCceEEEecccchhhhhhcc----CCCcEEEEEcCCCCCCcccccceEEeecHHHHHHHHHhhcc
Q 018544 291 APELYMAFGVSGAIQHLAGM----RDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKFP 351 (354)
Q Consensus 291 ~P~lYia~GISGa~QH~~G~----~~s~~IVAIN~D~~ApIf~~aDygiVgD~~~vlp~l~~~l~ 351 (354)
+.+|+|.+|.|..++=.+++ +....+|.||.+|-. ...+|+.|-||.-+++|.|.++|.
T Consensus 255 ~aDllLviGTSL~V~Paa~lv~~~~~~~~~v~IN~~~t~--~~~~dl~i~g~~~~vl~~L~~~lg 317 (354)
T 2hjh_A 255 ECDLLICIGTSLKVAPVSEIVNMVPSHVPQVLINRDPVK--HAEFDLSLLGYCDDIAAMVAQKCG 317 (354)
T ss_dssp TCCEEEEESCCCCEETGGGHHHHSCTTSCEEEEESSCCT--TSCCSEEEESCHHHHHHHHHHHHT
T ss_pred hCCEEEEECcCCCchhHHHHHHHHhcCCcEEEEcCCCCC--CCCcCEEEeCCHHHHHHHHHHHcC
Confidence 46899999999998755544 323357889999864 256899999999999999998764
No 30
>1q14_A HST2 protein; histone deacetylase, hydrolase; 2.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5
Probab=90.65 E-value=0.24 Score=47.97 Aligned_cols=61 Identities=18% Similarity=0.108 Sum_probs=46.9
Q ss_pred CCceEEEecccchhhhhhcc----CCCcEEEEEcCCCCCCc---ccccceEEeecHHHHHHHHHhhcc
Q 018544 291 APELYMAFGVSGAIQHLAGM----RDSKVIVAVNKDADAPI---FQVADYGLVGDLFEVIPELLEKFP 351 (354)
Q Consensus 291 ~P~lYia~GISGa~QH~~G~----~~s~~IVAIN~D~~ApI---f~~aDygiVgD~~~vlp~l~~~l~ 351 (354)
+.+|+|.+|.|+.++=.+++ +.-..+|.||.+|..++ -..+|+.|-||+-++||.|.+.|.
T Consensus 219 ~aDllLviGTSl~V~Paa~l~~~~~~g~~~v~IN~~~t~~~~~~~~~~d~~i~g~~~evl~~L~~~Lg 286 (361)
T 1q14_A 219 QQPLVIVVGTSLAVYPFASLPEEIPRKVKRVLCNLETVGDFKANKRPTDLIVHQYSDEFAEQLVEELG 286 (361)
T ss_dssp CCCEEEEESCCCCSTTGGGHHHHSCTTSEEEEESSSCCHHHHHTCCTTCEEECSCHHHHHHHHHHHHT
T ss_pred cCCEEEEECCCCCchhHHHHHHHHhcCCeEEEEeCCCccccccCcccccEEEeCCHHHHHHHHHHHcC
Confidence 56899999999988755554 32335667999986422 245899999999999999998764
No 31
>3glr_A NAD-dependent deacetylase sirtuin-3, mitochondria; NAD dependent deacetylase, sirtuin, substrate peptide comple hydrolase, metal-binding; HET: ALY; 1.80A {Homo sapiens} PDB: 3gls_A 3glt_A* 3glu_A 4hd8_A* 4fvt_A*
Probab=88.56 E-value=0.45 Score=44.55 Aligned_cols=61 Identities=21% Similarity=0.359 Sum_probs=48.6
Q ss_pred CCceEEEecccchhhhhhccC----CCcEEEEEcCCCCCCc---ccccceEEeecHHHHHHHHHhhcc
Q 018544 291 APELYMAFGVSGAIQHLAGMR----DSKVIVAVNKDADAPI---FQVADYGLVGDLFEVIPELLEKFP 351 (354)
Q Consensus 291 ~P~lYia~GISGa~QH~~G~~----~s~~IVAIN~D~~ApI---f~~aDygiVgD~~~vlp~l~~~l~ 351 (354)
+.+|.|.+|-|+.++-.+++- ....+|-||.+|-.+. -..+|+-+-||.-+++|.|.++|.
T Consensus 197 ~aDlllviGTSl~V~Paa~l~~~~~~~~~~v~IN~~~~~~~~~~~~~~d~~~~g~~~~~~~~L~~~lg 264 (285)
T 3glr_A 197 MADLLLILGTSLEVEPFASLTEAVRSSVPRLLINRDLVGPLAWHPRSRDVAQLGDVVHGVESLVELLG 264 (285)
T ss_dssp HCSEEEEESCCCCEETTGGGGGSSCTTSCEEEEESSCCTHHHHSCCTTEEEEESCHHHHHHHHHHHHT
T ss_pred cCCEEEEeCCCCccccHHHHHHHHhCCCcEEEECCCCcCccccCCCCccEEEcCCHHHHHHHHHHHhC
Confidence 478999999999998766642 3335778999986542 257899999999999999998874
No 32
>1uan_A Hypothetical protein TT1542; rossmann-like, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.00A {Thermus thermophilus} SCOP: c.134.1.1
Probab=88.36 E-value=2.6 Score=37.57 Aligned_cols=95 Identities=12% Similarity=0.017 Sum_probs=57.7
Q ss_pred cceeEEEEEecCCccChHHHH---HHHHHHhcCCCCcEEEEEEcCCC----C-----HHHHHHHHhhcCCCccEEEEEeC
Q 018544 25 SISTLVLGEHENGSIKSQSLS---AVEAAKSLSDDNSVSMLLAGSGP----S-----FNEAVKHAASSHPSISQVLVADS 92 (354)
Q Consensus 25 ~~~IlV~~E~~~g~l~~~sle---ll~~A~~La~~~~V~avv~G~~~----~-----~~~~a~~l~~~~~GaD~V~~~~~ 92 (354)
+++++++.-|.+. .++- .|....+ ++.+|.++++-.+. . .+++.+.+. ..|++.++.++-
T Consensus 1 m~~vL~v~aHPDD----e~l~~ggtia~~~~--~G~~v~vv~lT~G~~g~~~~~~~R~~E~~~A~~--~lG~~~~~~l~~ 72 (227)
T 1uan_A 1 MLDLLVVAPHPDD----GELGCGGTLARAKA--EGLSTGILDLTRGEMGSKGTPEEREKEVAEASR--ILGLDFRGNLGF 72 (227)
T ss_dssp CEEEEEEESSTTH----HHHHHHHHHHHHHH--TTCCEEEEEEECCTTTCCSCHHHHHHHHHHHHH--HHTCSEEEEEEE
T ss_pred CceEEEEEeCCCc----HHHhHHHHHHHHHh--CCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHH--hcCCCeEEECCC
Confidence 4678999988763 2222 1222222 24677777763221 0 122333332 479998766665
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCccEEEeCCCCCc
Q 018544 93 DKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFG 127 (354)
Q Consensus 93 ~~l~~~~~e~~a~aLa~li~~~~P~lVL~g~T~~G 127 (354)
|.-.-...+.....|.+++++.+|++|+.+....+
T Consensus 73 ~D~~l~~~~~~~~~l~~~ir~~~P~~V~t~~~~d~ 107 (227)
T 1uan_A 73 PDGGLADVPEQRLKLAQALRRLRPRVVFAPLEADR 107 (227)
T ss_dssp CTTCCCCCHHHHHHHHHHHHHHCEEEEEEECSCCS
T ss_pred CCCCCCChHHHHHHHHHHHHHhCCCEEEeCCCCCC
Confidence 54433445778899999999999999998764444
No 33
>3k35_A NAD-dependent deacetylase sirtuin-6; rossmann fold, Zn-binding domain, structural genomics, struc genomics consortium, SGC, ADP-ribosylation; HET: APR; 2.00A {Homo sapiens}
Probab=88.19 E-value=0.65 Score=44.13 Aligned_cols=60 Identities=23% Similarity=0.294 Sum_probs=49.1
Q ss_pred CCceEEEecccchhhhhhcc-----CCCcEEEEEcCCCCCCcccccceEEeecHHHHHHHHHhhcc
Q 018544 291 APELYMAFGVSGAIQHLAGM-----RDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKFP 351 (354)
Q Consensus 291 ~P~lYia~GISGa~QH~~G~-----~~s~~IVAIN~D~~ApIf~~aDygiVgD~~~vlp~l~~~l~ 351 (354)
+.+|.|.+|-|+.++--+++ +.-..+|-||.+|. +.=+.||+-|-+++-++||.|.+.|.
T Consensus 206 ~aDllLViGTSL~V~Paa~l~~~a~~~G~~vviIN~~~t-~~d~~adl~i~g~~~evl~~L~~~Lg 270 (318)
T 3k35_A 206 NADLSITLGTSLQIRPSGNLPLATKRRGGRLVIVNLQPT-KHDRHADLRIHGYVDEVMTRLMKHLG 270 (318)
T ss_dssp TCSEEEEESCCCCSTTGGGHHHHHHHTTCEEEEECSSCC-TTGGGCSEEECSCHHHHHHHHHHHHT
T ss_pred cCCEEEEEccCCCchhhhhhHHHHHhcCCEEEEECCCCC-CCCCcccEEEeCCHHHHHHHHHHHhC
Confidence 57899999999999877776 22344777999875 45678999999999999999998875
No 34
>1j8f_A SIRT2, sirtuin 2, isoform 1, silencing INFO; gene regulation, transferase; 1.70A {Homo sapiens} SCOP: c.31.1.5
Probab=88.05 E-value=0.76 Score=43.69 Aligned_cols=61 Identities=21% Similarity=0.253 Sum_probs=46.8
Q ss_pred CCceEEEecccchhhhhhcc----CCCcEEEEEcCCCCCC---c------------c----cccceEEeecHHHHHHHHH
Q 018544 291 APELYMAFGVSGAIQHLAGM----RDSKVIVAVNKDADAP---I------------F----QVADYGLVGDLFEVIPELL 347 (354)
Q Consensus 291 ~P~lYia~GISGa~QH~~G~----~~s~~IVAIN~D~~Ap---I------------f----~~aDygiVgD~~~vlp~l~ 347 (354)
+.+|+|.+|.|..++=.+++ +....+|.||.++--. | | +.+|+.|-||.-++++.|.
T Consensus 220 ~aDlllviGTSl~V~P~a~l~~~~~~~~~~v~IN~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~gd~~~~l~~L~ 299 (323)
T 1j8f_A 220 KVDLLLVMGTSLQVQPFASLISKAPLSTPRLLINKEKAGQSDPFLGMIMGLGGGMDFDSKKAYRDVAWLGECDQGCLALA 299 (323)
T ss_dssp SCSEEEEESSCSCSHHHHHHHTTSCTTCCEEEEESSCCCCCCHHHHHHHHHHTCCCSSSTTCCSEEEEESCHHHHHHHHH
T ss_pred CCCEEEEEeeCcccHHHHHHHHHHHcCCcEEEEeCCCCCCCcccccccccccccccccccccceeEEEeCCHHHHHHHHH
Confidence 57899999999999854443 2234567899988532 1 1 4589999999999999999
Q ss_pred hhcc
Q 018544 348 EKFP 351 (354)
Q Consensus 348 ~~l~ 351 (354)
++|.
T Consensus 300 ~~lg 303 (323)
T 1j8f_A 300 ELLG 303 (323)
T ss_dssp HHTT
T ss_pred HHcC
Confidence 8875
No 35
>3cf4_G Acetyl-COA decarboxylase/synthase epsilon subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=87.99 E-value=0.59 Score=39.90 Aligned_cols=111 Identities=13% Similarity=0.139 Sum_probs=65.7
Q ss_pred cEEEEeCccCCChhcHHHHHHHHHHhCCeecccHhhHhcCCCCCC----ce--eccCC-----------cee-CCceEEE
Q 018544 236 RIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPND----LQ--VGQTG-----------KIV-APELYMA 297 (354)
Q Consensus 236 ~iVV~~GrG~~~~e~~~~~~~LA~~lga~vG~SRp~vd~gw~p~~----~q--IGqtG-----------~~V-~P~lYia 297 (354)
+-++-+|.|+...+..+.+.+||+++|+-|-.|-. ..|.+|.+ .. +|..| ..+ ..+|-|+
T Consensus 36 rPvil~G~g~~~~~a~~~l~~lae~~~iPV~~t~~--gkg~~~~~hp~~~~~~~G~~G~~~~~~~~~~~~~~~~aDlvl~ 113 (170)
T 3cf4_G 36 RPLLMVGTLALDPELLDRVVKISKAANIPIAATGS--SLAVLADKDVDAKYINAHMLGFYLTDPKWPGLDGNGNYDMIIT 113 (170)
T ss_dssp SEEEEECSTTCCHHHHHHHHHHHHHHTCCEEECTT--THHHHTTSSSCEEECCHHHHHHHTTCTTCCCSSSSCCCSEEEE
T ss_pred CCEEEECCCccchhHHHHHHHHHHHhCCCEEECcc--cCcccCCCChhhhcceeeeccccCChhhhhHHHHhhcCCEEEE
Confidence 34556666776667788999999999998877632 22334433 33 55433 223 4689999
Q ss_pred ecccc--hhhhhhccC---CCcEEEEEcCCCCCCcccccceEEeecHHHHHHHHHhhccc
Q 018544 298 FGVSG--AIQHLAGMR---DSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKFPE 352 (354)
Q Consensus 298 ~GISG--a~QH~~G~~---~s~~IVAIN~D~~ApIf~~aDygiVgD~~~vlp~l~~~l~~ 352 (354)
+|..= .-.++.+.+ . ..+|-||++-..-+ .. -|.-+ .+.++++.|.+.+..
T Consensus 114 iG~~~~~~~~~t~~~~~~~~-~~iI~i~~~~~~~~-~~-~~~~l-~~~~~l~~L~~~~~~ 169 (170)
T 3cf4_G 114 IGFKKFYINQVLSAAKNFSN-LKTIAIERGYIQNA-TM-SFGNL-SKADHYAALDELINA 169 (170)
T ss_dssp ESCCHHHHHHHHHHHHHHCC-CCEEECSSSCCTTS-SE-ECCCC-CHHHHHHHHHHHHHT
T ss_pred ECCccCccccccccccccCC-CeEEEECCCcccch-hh-hhccC-CHHHHHHHHHHHHhh
Confidence 99764 444443321 2 34667877643322 11 11111 377888888877653
No 36
>3riy_A NAD-dependent deacetylase sirtuin-5; desuccinylase, demalonylase, posttranslational modification, binding domain, rossmann fold domain; HET: SLL NAD; 1.55A {Homo sapiens} SCOP: c.31.1.5 PDB: 3rig_A* 4f4u_A* 4f56_A* 4hda_A* 2b4y_A* 2nyr_A* 4g1c_A*
Probab=87.52 E-value=0.6 Score=43.28 Aligned_cols=56 Identities=18% Similarity=0.249 Sum_probs=44.6
Q ss_pred CCceEEEecccchhhhhhcc-----CCCcEEEEEcCCCCCCcccccceEEeecHHHHHHHHH
Q 018544 291 APELYMAFGVSGAIQHLAGM-----RDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELL 347 (354)
Q Consensus 291 ~P~lYia~GISGa~QH~~G~-----~~s~~IVAIN~D~~ApIf~~aDygiVgD~~~vlp~l~ 347 (354)
+.+|+|.+|.|+.++=.+++ +.-..+|-||.+|. |.=+.+|+.|-||+-++||+|+
T Consensus 212 ~aDl~lviGTSl~V~Paa~l~~~a~~~g~~~v~IN~~~t-~~d~~~~~~i~g~~~~~l~~l~ 272 (273)
T 3riy_A 212 HCDLCLVVGTSSVVYPAAMFAPQVAARGVPVAEFNTETT-PATNRFRFHFQGPCGTTLPEAL 272 (273)
T ss_dssp HCSEEEEESCCSCEETGGGHHHHHHHTTCCEEEEESSCC-TTGGGSSEEEESCHHHHHHHHH
T ss_pred cCCEEEEEeeCCcchhHHHhHHHHHHCCCEEEEECCCCC-CCCcceeEEEeCCHHHHHHHHh
Confidence 57899999999988766665 12334677999874 4556899999999999999986
No 37
>3pki_A NAD-dependent deacetylase sirtuin-6; ADP ribose, structural genomics, structural genomics consortium, SGC, hydrolase; HET: AR6; 2.04A {Homo sapiens} PDB: 3pkj_A*
Probab=86.41 E-value=0.89 Score=43.78 Aligned_cols=60 Identities=25% Similarity=0.308 Sum_probs=48.8
Q ss_pred CCceEEEecccchhhhhhcc-----CCCcEEEEEcCCCCCCcccccceEEeecHHHHHHHHHhhcc
Q 018544 291 APELYMAFGVSGAIQHLAGM-----RDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKFP 351 (354)
Q Consensus 291 ~P~lYia~GISGa~QH~~G~-----~~s~~IVAIN~D~~ApIf~~aDygiVgD~~~vlp~l~~~l~ 351 (354)
+.+|.|.+|-|+.++=-+++ +.-..||.||.++. +.=+.+|+-|-++.-++||.|.++|.
T Consensus 206 ~aDllLViGTSL~V~Paa~Lp~~a~~~G~~vviIN~~pT-~~d~~adl~i~g~a~evl~~L~~~Lg 270 (355)
T 3pki_A 206 NADLSITLGTSLQIRPSGNLPLATKRRGGRLVIVNLQPT-KHDRHADLRIHGYVDEVMTRLMEHLG 270 (355)
T ss_dssp HCSEEEEESCCCCSTTGGGTTHHHHHTTCEEEEECSSCC-TTGGGCSEEECSCHHHHHHHHHHHTT
T ss_pred cCCEEEEEeeCCCchhhhhhHHHHHhcCCEEEEECCCCC-CCCCccCEEEeCCHHHHHHHHHHHhC
Confidence 46899999999999877776 12235777999874 45578999999999999999999875
No 38
>3u31_A SIR2A, transcriptional regulatory protein SIR2 homologue; Zn-binding domain, rossmann fold domain; HET: MYK NAD; 2.20A {Plasmodium falciparum} PDB: 3u3d_A* 3jwp_A*
Probab=85.25 E-value=0.67 Score=43.41 Aligned_cols=60 Identities=18% Similarity=0.329 Sum_probs=45.4
Q ss_pred CCceEEEecccchhhhhhcc-----CCCcEEEEEcCCCCCCc-ccccceEEeecHHHHHHHHHhhccc
Q 018544 291 APELYMAFGVSGAIQHLAGM-----RDSKVIVAVNKDADAPI-FQVADYGLVGDLFEVIPELLEKFPE 352 (354)
Q Consensus 291 ~P~lYia~GISGa~QH~~G~-----~~s~~IVAIN~D~~ApI-f~~aDygiVgD~~~vlp~l~~~l~~ 352 (354)
+.+|+|.+|.|+.++-.+++ +.-..+|-||.+|. |+ -..+|+.|-||+-++++ |.+.|+.
T Consensus 216 ~aDllLviGTSl~V~Paa~l~~~a~~~g~~~v~IN~~~t-~~~~~~~d~~i~g~a~~vl~-~~~~l~~ 281 (290)
T 3u31_A 216 KCDLLLVIGTSSTVSTATNLCHFACKKKKKIVEINISKT-YITNKMSDYHVCAKFSELTK-VANILKG 281 (290)
T ss_dssp HCSEEEEESCCSCSHHHHHHHHHHHHTTCCEEEEESSCC-TTTTTTCSEEEESCGGGHHH-HHHHHHH
T ss_pred cCCEEEEECcCCcchhHHHHHHHHHHcCCEEEEECCCCC-CCCCccceEEEECCHHHHHH-HHHHHhc
Confidence 67899999999999877665 22234677999884 34 24689999999999876 5566653
No 39
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=83.26 E-value=5.1 Score=36.17 Aligned_cols=96 Identities=13% Similarity=0.051 Sum_probs=57.6
Q ss_pred ceeEEEEEecCCccChHHHHHHH-HHHhcCCCCcEEEEEE--cCCC--C-----HHHHHHHHhhcCCCccEEEEEeCCCC
Q 018544 26 ISTLVLGEHENGSIKSQSLSAVE-AAKSLSDDNSVSMLLA--GSGP--S-----FNEAVKHAASSHPSISQVLVADSDKF 95 (354)
Q Consensus 26 ~~IlV~~E~~~g~l~~~slell~-~A~~La~~~~V~avv~--G~~~--~-----~~~~a~~l~~~~~GaD~V~~~~~~~l 95 (354)
++++++.-|.+.+ ++-.=. -|+-.+++.+|.+|++ |... . .+++.+.+. ..|++.++.++-+..
T Consensus 4 ~~vL~v~aHPDDe----~l~~Ggtia~~~~~G~~V~vv~lT~G~~g~~~~~~~R~~E~~~A~~--~LGv~~~~~L~~~D~ 77 (242)
T 2ixd_A 4 LHILAFGAHADDV----EIGMAGTIAKYTKQGYEVGICDLTEADLSSNGTIELRKEEAKVAAR--IMGVKTRLNLAMPDR 77 (242)
T ss_dssp CSEEEEESSTTHH----HHHHHHHHHHHHHTTCCEEEEEEECCTTCSSSCHHHHHHHHHHHHH--HHTCCEEEEEEECTT
T ss_pred ccEEEEEeCCChH----HHhHHHHHHHHHHCCCeEEEEEEcCCCCCCCCCHHHHHHHHHHHHH--HcCCCeEEECCCCCC
Confidence 5789999987632 221100 0111112467877776 3211 0 122333332 479997777765554
Q ss_pred CCCCHHHHHHHHHHHHHhcCccEEEeCCCCCc
Q 018544 96 AYPIAEPWAKLVHMIQQREKYSHIISASGSFG 127 (354)
Q Consensus 96 ~~~~~e~~a~aLa~li~~~~P~lVL~g~T~~G 127 (354)
.-...+.....|.+++++.+|++|+.+....+
T Consensus 78 ~~~~~~~~~~~l~~~ir~~~PdvV~t~~~~d~ 109 (242)
T 2ixd_A 78 GLYMKEEYIREIVKVIRTYKPKLVFAPYYEDR 109 (242)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCSEEEEECSCSS
T ss_pred CCCChHHHHHHHHHHHHHcCCCEEEECCCCCC
Confidence 44455778899999999999999998765444
No 40
>4iao_A NAD-dependent histone deacetylase SIR2; protein complex, deacetylase, nucleus, hydrolase-trans complex; HET: APR; 2.90A {Saccharomyces cerevisiae}
Probab=80.99 E-value=2.1 Score=42.86 Aligned_cols=59 Identities=17% Similarity=0.200 Sum_probs=48.0
Q ss_pred CCceEEEecccchhhhhhcc----CCCcEEEEEcCCCCCCcccccceEEeecHHHHHHHHHhhcc
Q 018544 291 APELYMAFGVSGAIQHLAGM----RDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKFP 351 (354)
Q Consensus 291 ~P~lYia~GISGa~QH~~G~----~~s~~IVAIN~D~~ApIf~~aDygiVgD~~~vlp~l~~~l~ 351 (354)
+.+|.|.+|-|+.++=.+++ +....+|.||.+|-.. ..+|+-+-||.-++++.|.++|.
T Consensus 393 ~aDLlLVIGTSL~VyPaA~Lv~~a~~~~p~ViIN~ept~~--~~~Dl~l~G~cdevv~~L~~~LG 455 (492)
T 4iao_A 393 ECDLLICIGTSLKVAPVSEIVNMVPSHVPQVLINRDPVKH--AEFDLSLLGYCDDIAAMVAQKCG 455 (492)
T ss_dssp TCSEEEEESCCCCEETGGGHHHHSBTTSCEEEEESSCCTT--SCCSEEEESCHHHHHHHHHHHTT
T ss_pred hCCEEEEeccCCCccchhhHHHHHhcCCcEEEEcCCCCCC--CCccEEEeCCHHHHHHHHHHHhC
Confidence 57999999999998866665 3333577899998653 45799999999999999999874
No 41
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=80.76 E-value=4.4 Score=40.84 Aligned_cols=107 Identities=17% Similarity=0.095 Sum_probs=67.7
Q ss_pred cEEEEeCccCCChhcHHHHHHHHHHhCCeecccHh-hHhcCCCCCCc--eeccC-C-cee-CCceEEEecccc---hh-h
Q 018544 236 RIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRA-VVDAGFVPNDL--QVGQT-G-KIV-APELYMAFGVSG---AI-Q 305 (354)
Q Consensus 236 ~iVV~~GrG~~~~e~~~~~~~LA~~lga~vG~SRp-~vd~gw~p~~~--qIGqt-G-~~V-~P~lYia~GISG---a~-Q 305 (354)
-+|++|| + ..+..+.+.+||+++|.-|-+|-. - .|.++.++ .+|.. . ..+ .++|-|++|-.= .. +
T Consensus 222 PvIl~G~-~--~~~a~~~l~~lae~~~~PV~~t~~~~--~~~~~~~~~~~lg~~~~~~~~~~aDlvl~iG~~~~~~~~~~ 296 (556)
T 3hww_A 222 GVVVAGR-M--SAEEGKKVALWAQTLGWPLIGDVLSQ--TGQPLPCADLWLGNAKATSELQQAQIVVQLGSSLTGKRLLQ 296 (556)
T ss_dssp EEEEECB-C--CHHHHHHHHHHHHHHTCCEEECTTTC--SCCSSCCHHHHTTSHHHHHHHTTCSEEEEESBCCCCHHHHH
T ss_pred eEEEECC-C--ChHHHHHHHHHHHhcCCEEEEccCCC--CCCCcCcHHHHhcCchhhhcccCCCEEEEcCCCcccHHHHH
Confidence 3566665 3 345668899999999998876621 2 24444432 34421 1 122 799999999742 11 1
Q ss_pred hhhccCCCcEEEEEcCCCCCC-cccccceEEeecHHHHHHHHHh
Q 018544 306 HLAGMRDSKVIVAVNKDADAP-IFQVADYGLVGDLFEVIPELLE 348 (354)
Q Consensus 306 H~~G~~~s~~IVAIN~D~~Ap-If~~aDygiVgD~~~vlp~l~~ 348 (354)
+..-... +.+|-|+.||.-. -+..+|++|++|+.+++.+|.+
T Consensus 297 ~~~~~~~-~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~l~~ 339 (556)
T 3hww_A 297 WQASCEP-EEYWIVDDIEGRLDPAHHRGRRLIANIADWLELHPA 339 (556)
T ss_dssp HHHHCCC-SEEEEEESSCSCCCTTCCSEEEEESCHHHHHHHSCC
T ss_pred HHhcCCC-CeEEEECCCCccCCCCCCceEEEEcCHHHHHHhccc
Confidence 2222333 3688899998532 2446799999999999988643
No 42
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=80.33 E-value=20 Score=32.79 Aligned_cols=116 Identities=13% Similarity=0.035 Sum_probs=70.1
Q ss_pred cccceeEEEEEecCCccChHHHHHHHHHHhcCCCCcEEEEEEcCCCCHHHHHHHHhhcCCCccEEEEEeCCCCCCCCHHH
Q 018544 23 SRSISTLVLGEHENGSIKSQSLSAVEAAKSLSDDNSVSMLLAGSGPSFNEAVKHAASSHPSISQVLVADSDKFAYPIAEP 102 (354)
Q Consensus 23 ~~~~~IlV~~E~~~g~l~~~slell~~A~~La~~~~V~avv~G~~~~~~~~a~~l~~~~~GaD~V~~~~~~~l~~~~~e~ 102 (354)
..+|+|+++...-.....-...-+...++.| ++.+|+++..... ... ..... ...|.. ++.+... .......
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L-~g~~v~v~~~~~~--~~~-~~~~~-~~~~~~-~~~~~~~--~~~~~~~ 73 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ-DPESIVVFASTQN--AEE-AHAYD-KTLDYE-VIRWPRS--VMLPTPT 73 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS-CGGGEEEEEECSS--HHH-HHHHH-TTCSSE-EEEESSS--SCCSCHH
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh-cCCeEEEEECCCC--ccc-hhhhc-cccceE-EEEcccc--ccccchh
Confidence 3578999999754433444455555667777 3568888887765 221 12222 124543 5444432 2233346
Q ss_pred HHHHHHHHHHhcCccEEEeCCCCCccchHHHHHHHcCCC-ceeeeE
Q 018544 103 WAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVS-PITDVI 147 (354)
Q Consensus 103 ~a~aLa~li~~~~P~lVL~g~T~~GrdlaprlAarL~~~-lvtdv~ 147 (354)
+...+.+++++.+||+|.+..... -.+...++.+++.| ++..+-
T Consensus 74 ~~~~l~~~~~~~~~Dvv~~~~~~~-~~~~~~~~~~~~~~~~i~~~h 118 (394)
T 3okp_A 74 TAHAMAEIIREREIDNVWFGAAAP-LALMAGTAKQAGASKVIASTH 118 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEESSCTT-GGGGHHHHHHTTCSEEEEECC
T ss_pred hHHHHHHHHHhcCCCEEEECCcch-HHHHHHHHHhcCCCcEEEEec
Confidence 667888999999999999865433 34556668888887 554443
No 43
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=79.97 E-value=21 Score=31.95 Aligned_cols=121 Identities=12% Similarity=0.009 Sum_probs=76.2
Q ss_pred HHHhcCCCccc---cccc---cccceeEEEEEecCCccChHHHHHHHHHHhcCC--CCcEEEEEEcCCCC----HHHHHH
Q 018544 8 WALSKRPRCFH---RPSI---SRSISTLVLGEHENGSIKSQSLSAVEAAKSLSD--DNSVSMLLAGSGPS----FNEAVK 75 (354)
Q Consensus 8 ~~~~~~~~~~~---~~~~---~~~~~IlV~~E~~~g~l~~~slell~~A~~La~--~~~V~avv~G~~~~----~~~~a~ 75 (354)
++++++..||. ++.. ....+|+|-.+. .+.+..++..|..|++ +.+++++-+.+... .+.+.+
T Consensus 147 ~~vl~~~~~PVlvv~~~~~~~~~~~~Ilv~~d~-----s~~s~~al~~a~~la~~~~~~l~ll~v~~~~~~~~~l~~~~~ 221 (294)
T 3loq_A 147 EGVLHDSKVPVYIFKHDMVVNSLFDRVLVAYDF-----SKWADRALEYAKFVVKKTGGELHIIHVSEDGDKTADLRVMEE 221 (294)
T ss_dssp HHHHHHCSSCEEEECCCTTTTCTTSEEEEECCS-----SHHHHHHHHHHHHHHHHHTCEEEEEEECSSSCCHHHHHHHHH
T ss_pred HHHHhcCCCCEEEecCccccCccCCEEEEEECC-----CHHHHHHHHHHHHHhhhcCCEEEEEEEccCchHHHHHHHHHH
Confidence 45566666653 3332 334567766543 2578888999988875 67899888865321 234445
Q ss_pred HHhhcCCCccEEEEEeCCCCCCCCHHHHHHHHHHHHHhcCccEEEeCCCCCcc-------chHHHHHHHcCCCce
Q 018544 76 HAASSHPSISQVLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGK-------NVLPRAAALLDVSPI 143 (354)
Q Consensus 76 ~l~~~~~GaD~V~~~~~~~l~~~~~e~~a~aLa~li~~~~P~lVL~g~T~~Gr-------dlaprlAarL~~~lv 143 (354)
.+. .+|.+--+.+.. + ...+.|.+.+++.++|+|++|....++ .++-++.....+|++
T Consensus 222 ~l~--~~~~~~~~~~~~----g----~~~~~I~~~a~~~~~dLlV~G~~~~~~~~~~~~Gs~~~~vl~~~~~pvL 286 (294)
T 3loq_A 222 VIG--AEGIEVHVHIES----G----TPHKAILAKREEINATTIFMGSRGAGSVMTMILGSTSESVIRRSPVPVF 286 (294)
T ss_dssp HHH--HTTCCEEEEEEC----S----CHHHHHHHHHHHTTCSEEEEECCCCSCHHHHHHHCHHHHHHHHCSSCEE
T ss_pred HHH--HcCCcEEEEEec----C----CHHHHHHHHHHhcCcCEEEEeCCCCCCccceeeCcHHHHHHhcCCCCEE
Confidence 554 368772222221 1 245778888999999999999875543 445667777777754
No 44
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=79.66 E-value=18 Score=31.94 Aligned_cols=102 Identities=13% Similarity=0.176 Sum_probs=61.8
Q ss_pred cceeEEEEEecCCccChHHHHHHHHHHhcCC-CCcEEEEEEcCCCCHHHHHHHHhhcCCCccEEEEEeCCCCCCCCHHHH
Q 018544 25 SISTLVLGEHENGSIKSQSLSAVEAAKSLSD-DNSVSMLLAGSGPSFNEAVKHAASSHPSISQVLVADSDKFAYPIAEPW 103 (354)
Q Consensus 25 ~~~IlV~~E~~~g~l~~~slell~~A~~La~-~~~V~avv~G~~~~~~~~a~~l~~~~~GaD~V~~~~~~~l~~~~~e~~ 103 (354)
+++|.|++-.. | ..+++|-.+.+-++ ..+|.+|+--..+ ....+.+. .+|.. +++++...+. +.+.|
T Consensus 2 m~riavl~Sg~-G----snl~ali~~~~~~~l~~eI~~Visn~~~--a~v~~~A~--~~gIp-~~~~~~~~~~--~r~~~ 69 (211)
T 3p9x_A 2 MKRVAIFASGS-G----TNAEAIIQSQKAGQLPCEVALLITDKPG--AKVVERVK--VHEIP-VCALDPKTYP--SKEAY 69 (211)
T ss_dssp -CEEEEECCTT-C----HHHHHHHHHHHTTCCSSEEEEEEESCSS--SHHHHHHH--TTTCC-EEECCGGGSS--SHHHH
T ss_pred CCEEEEEEeCC-c----hHHHHHHHHHHcCCCCcEEEEEEECCCC--cHHHHHHH--HcCCC-EEEeChhhcC--chhhh
Confidence 46677776543 2 56777777765444 3678776664321 22233333 57887 5555543332 35677
Q ss_pred HHHHHHHHHhcCccEEEeCCCCCccchHHHHHHHcCC
Q 018544 104 AKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDV 140 (354)
Q Consensus 104 a~aLa~li~~~~P~lVL~g~T~~GrdlaprlAarL~~ 140 (354)
-..+.+.+++.+||+|++.+ +++-+.+.+=.+...
T Consensus 70 d~~~~~~l~~~~~Dliv~ag--y~~Il~~~~l~~~~~ 104 (211)
T 3p9x_A 70 EIEVVQQLKEKQIDFVVLAG--YMRLVGPTLLGAYEG 104 (211)
T ss_dssp HHHHHHHHHHTTCCEEEESS--CCSCCCHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCEEEEeC--chhhcCHHHHhhccC
Confidence 77888899999999999875 455555555444443
No 45
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=76.73 E-value=2.2 Score=40.30 Aligned_cols=115 Identities=15% Similarity=0.083 Sum_probs=59.2
Q ss_pred cccccccceeEEEEEecCCccChHHHHHHHHHHhcCC-CCcEEEEEEcCCCCHHHHHHHHhhcCCCccEEEEEeCCCCC-
Q 018544 19 RPSISRSISTLVLGEHENGSIKSQSLSAVEAAKSLSD-DNSVSMLLAGSGPSFNEAVKHAASSHPSISQVLVADSDKFA- 96 (354)
Q Consensus 19 ~~~~~~~~~IlV~~E~~~g~l~~~slell~~A~~La~-~~~V~avv~G~~~~~~~~a~~l~~~~~GaD~V~~~~~~~l~- 96 (354)
...-+..|+|+++.....|.+++. +..|+.|.+ +.+|+++.-+ . ..+.. . ..|..-+-+-.+..+.
T Consensus 9 ~~~~~~~MrIl~~~~~~~gh~~~~----~~La~~L~~~GheV~v~~~~-~--~~~~~---~--~~G~~~~~~~~~~~~~~ 76 (398)
T 4fzr_A 9 GVPRGSHMRILVIAGCSEGFVMPL----VPLSWALRAAGHEVLVAASE-N--MGPTV---T--GAGLPFAPTCPSLDMPE 76 (398)
T ss_dssp ------CCEEEEECCSSHHHHGGG----HHHHHHHHHTTCEEEEEEEG-G--GHHHH---H--HTTCCEEEEESSCCHHH
T ss_pred CCCCCCceEEEEEcCCCcchHHHH----HHHHHHHHHCCCEEEEEcCH-H--HHHHH---H--hCCCeeEecCCccchHh
Confidence 344456699998876655665552 334444533 4788766543 2 23322 2 2577644432211000
Q ss_pred -------------CCCH---------------HHHHHHHHHHHHhcCccEEEeCCCCCccchHHHHHHHcCCCceeeeEE
Q 018544 97 -------------YPIA---------------EPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDVIE 148 (354)
Q Consensus 97 -------------~~~~---------------e~~a~aLa~li~~~~P~lVL~g~T~~GrdlaprlAarL~~~lvtdv~~ 148 (354)
.+.. ......+.+++++.+||+|+..... -.+..+|.++++|++.-...
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~---~~~~~~a~~~giP~v~~~~~ 153 (398)
T 4fzr_A 77 VLSWDREGNRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAERWKPDLVLTETYS---LTGPLVAATLGIPWIEQSIR 153 (398)
T ss_dssp HHSBCTTSCBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTC---THHHHHHHHHTCCEEEECCS
T ss_pred hhhhhccCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECccc---cHHHHHHHhhCCCEEEeccC
Confidence 0001 1122356677788899999854322 22556677899998865543
No 46
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=76.62 E-value=26 Score=28.31 Aligned_cols=106 Identities=8% Similarity=-0.085 Sum_probs=65.5
Q ss_pred ceeEEEEEecCCccChHHHHHHHHHHhcCC--CCcEEEEEEcCCCC-------------HHHHHHHHhhcCCCccEEEEE
Q 018544 26 ISTLVLGEHENGSIKSQSLSAVEAAKSLSD--DNSVSMLLAGSGPS-------------FNEAVKHAASSHPSISQVLVA 90 (354)
Q Consensus 26 ~~IlV~~E~~~g~l~~~slell~~A~~La~--~~~V~avv~G~~~~-------------~~~~a~~l~~~~~GaD~V~~~ 90 (354)
++|+|-.+. -.+.+..++..|.+|+. +.+++++-+-+... .+.+.+.+. ..|.+--+..
T Consensus 25 ~~ILv~vD~----~s~~s~~al~~A~~la~~~~a~l~llhV~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~g~~~~~~~ 98 (155)
T 3dlo_A 25 MPIVVAVDK----KSDRAERVLRFAAEEARLRGVPVYVVHSLPGGGRTKDEDIIEAKETLSWAVSIIR--KEGAEGEEHL 98 (155)
T ss_dssp CCEEEECCS----SSHHHHHHHHHHHHHHHHHTCCEEEEEEECCSTTSCHHHHHHHHHHHHHHHHHHH--HTTCCEEEEE
T ss_pred CeEEEEECC----CCHHHHHHHHHHHHHHHhcCCEEEEEEEEcCCCcccHHHHHHHHHHHHHHHHHHH--hcCCCceEEE
Confidence 468887764 14578889999988876 67888887743210 112223333 2566522211
Q ss_pred eCCCCCCCCHHHHHHHHHHHHHhcCccEEEeCCCCCc-------cchHHHHHHHcCCCce
Q 018544 91 DSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFG-------KNVLPRAAALLDVSPI 143 (354)
Q Consensus 91 ~~~~l~~~~~e~~a~aLa~li~~~~P~lVL~g~T~~G-------rdlaprlAarL~~~lv 143 (354)
.- ..-+ .++.|.+.+++.++|+|++|....+ ..++-++.....+|++
T Consensus 99 ~v---~~G~---~~~~I~~~a~~~~~DLIV~G~~g~~~~~~~~lGSv~~~vl~~a~~PVL 152 (155)
T 3dlo_A 99 LV---RGKE---PPDDIVDFADEVDAIAIVIGIRKRSPTGKLIFGSVARDVILKANKPVI 152 (155)
T ss_dssp EE---SSSC---HHHHHHHHHHHTTCSEEEEECCEECTTSCEECCHHHHHHHHHCSSCEE
T ss_pred Ee---cCCC---HHHHHHHHHHHcCCCEEEECCCCCCCCCCEEeccHHHHHHHhCCCCEE
Confidence 10 1112 3477888899999999999975432 2566778888777764
No 47
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=76.16 E-value=3.4 Score=38.98 Aligned_cols=109 Identities=15% Similarity=0.115 Sum_probs=61.8
Q ss_pred cccceeEEEEEecCCccChHHHHHHHHHHhcCC-CCcEEEEEEcCCCCHHHHHHHHhhcCCCccEEEEEeCC-CC-----
Q 018544 23 SRSISTLVLGEHENGSIKSQSLSAVEAAKSLSD-DNSVSMLLAGSGPSFNEAVKHAASSHPSISQVLVADSD-KF----- 95 (354)
Q Consensus 23 ~~~~~IlV~~E~~~g~l~~~slell~~A~~La~-~~~V~avv~G~~~~~~~~a~~l~~~~~GaD~V~~~~~~-~l----- 95 (354)
+++|+|+++.....|.+++. +..|++|.+ +.+|+.+.. . ..+. +. ..|..-+ .+..+ .+
T Consensus 18 ~~~MrIl~~~~~~~Ghv~~~----~~La~~L~~~GheV~v~~~--~--~~~~---~~--~~G~~~~-~~~~~~~~~~~~~ 83 (398)
T 3oti_A 18 GRHMRVLFVSSPGIGHLFPL----IQLAWGFRTAGHDVLIAVA--E--HADR---AA--AAGLEVV-DVAPDYSAVKVFE 83 (398)
T ss_dssp -CCCEEEEECCSSHHHHGGG----HHHHHHHHHTTCEEEEEES--S--CHHH---HH--TTTCEEE-ESSTTCCHHHHHH
T ss_pred hhcCEEEEEcCCCcchHhHH----HHHHHHHHHCCCEEEEecc--c--hHHH---HH--hCCCeeE-ecCCccCHHHHhh
Confidence 45699999987666666653 334555543 467776554 3 2332 22 3677633 33321 00
Q ss_pred ------------------CCCC--H-------HHHHHHHHHHHHhcCccEEEeCCCCCccchHHHHHHHcCCCceeeeEE
Q 018544 96 ------------------AYPI--A-------EPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDVIE 148 (354)
Q Consensus 96 ------------------~~~~--~-------e~~a~aLa~li~~~~P~lVL~g~T~~GrdlaprlAarL~~~lvtdv~~ 148 (354)
.... . ......+.+++++.+||+|+...... .++.+|.+++.|++.....
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVv~d~~~~---~~~~aA~~~giP~v~~~~~ 160 (398)
T 3oti_A 84 QVAKDNPRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDYRPDLVVYEQGAT---VGLLAADRAGVPAVQRNQS 160 (398)
T ss_dssp HHHHHCHHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHHCCSEEEEETTCH---HHHHHHHHHTCCEEEECCT
T ss_pred hcccCCccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECchhh---HHHHHHHHcCCCEEEEecc
Confidence 0000 0 01234567778888999999742222 2667888999999876544
No 48
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=75.55 E-value=11 Score=37.86 Aligned_cols=111 Identities=23% Similarity=0.203 Sum_probs=68.9
Q ss_pred cEEEEeCccCCChhcHHHHHHHHHHhCCeecccHhhHhcCCCCCC--ceecc-CC---c------eeCCceEEEecccch
Q 018544 236 RIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPND--LQVGQ-TG---K------IVAPELYMAFGVSGA 303 (354)
Q Consensus 236 ~iVV~~GrG~~~~e~~~~~~~LA~~lga~vG~SRp~vd~gw~p~~--~qIGq-tG---~------~V~P~lYia~GISGa 303 (354)
+-+|-.|.|....+..+.+.+||+++|.-|-+|-. -.|.+|.+ ..+|. .| . .-.+++-|.+|-.=.
T Consensus 211 rpvi~~G~g~~~~~a~~~l~~lae~~~~Pv~~t~~--~~g~~~~~~p~~~G~~~g~~~~~~~~~~l~~aDlvl~iG~~~~ 288 (566)
T 2vbi_A 211 SPVMLLGSKLRAANALAATETLADKLQCAVTIMAA--AKGFFPEDHAGFRGLYWGEVSNPGVQELVETSDALLCIAPVFN 288 (566)
T ss_dssp CEEEEECTTTTTTTCHHHHHHHHHHHCCEEEEEGG--GTTSSCTTSTTEEEEECGGGSCTTHHHHHHTCSEEEEESCCCB
T ss_pred CCEEEECcCccccchHHHHHHHHHHhCCCEEEccc--cCccCCCCCccccccccCccCCHHHHHHHHhCCEEEEECCCcc
Confidence 46777778887777889999999999999987753 45677643 35554 23 2 224799999996321
Q ss_pred hhhhhcc---CCCcEEEEEcCCCCCCcccccceEEeecHHHHHHHHHhhcc
Q 018544 304 IQHLAGM---RDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKFP 351 (354)
Q Consensus 304 ~QH~~G~---~~s~~IVAIN~D~~ApIf~~aDygiVgD~~~vlp~l~~~l~ 351 (354)
.-.+.+. .....+|-||.|+.- + .. .+-.--++.+++.+|++.++
T Consensus 289 ~~~~~~~~~~~~~~~~i~id~d~~~-~-~~-~~~~~~~~~~~l~~L~~~l~ 336 (566)
T 2vbi_A 289 DYSTVGWSAWPKGPNVILAEPDRVT-V-DG-RAYDGFTLRAFLQALAEKAP 336 (566)
T ss_dssp TTTTTTTTSCCCSTTEEEECSSEEE-E-TT-EEEESSCHHHHHHHHHHHCC
T ss_pred ccccccccccCCCCcEEEEeCChhe-e-CC-cccCCccHHHHHHHHHHhcc
Confidence 1122221 122346778888742 1 11 12222246889999988765
No 49
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=72.47 E-value=32 Score=26.79 Aligned_cols=101 Identities=12% Similarity=0.126 Sum_probs=62.8
Q ss_pred eeEEEEEecCCccChHHHHHHHHHHhcCC--CCcEEEEEEcCCCC----------------------------HHHHHHH
Q 018544 27 STLVLGEHENGSIKSQSLSAVEAAKSLSD--DNSVSMLLAGSGPS----------------------------FNEAVKH 76 (354)
Q Consensus 27 ~IlV~~E~~~g~l~~~slell~~A~~La~--~~~V~avv~G~~~~----------------------------~~~~a~~ 76 (354)
+|+|-.+. .+.+..++..|.+|++ +.+++++-+-+... .+.+.+.
T Consensus 4 ~ILv~vD~-----s~~s~~al~~A~~la~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 78 (147)
T 3hgm_A 4 RIMVPVDG-----SKGAVKALEKGVGLQQLTGAELYILCVFKHHSLLEASLSMARPEQLDIPDDALKDYATEIAVQAKTR 78 (147)
T ss_dssp EEEEECCS-----BHHHHHHHHHHHHHHHHHCCEEEEEEEECCHHHHHHTBSSCCCGGGCCCTTHHHHHHHHHHHHHHHH
T ss_pred eEEEEeCC-----CHHHHHHHHHHHHHHHhcCCEEEEEEEecCcccccccccccChhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 56666653 3578889999988876 67888886643210 0111222
Q ss_pred HhhcCCCcc----EEEEEeCCCCCCCCHHHHHHHHHHHHHhcCccEEEeCCCCCc-------cchHHHHHHHcCCCce
Q 018544 77 AASSHPSIS----QVLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFG-------KNVLPRAAALLDVSPI 143 (354)
Q Consensus 77 l~~~~~GaD----~V~~~~~~~l~~~~~e~~a~aLa~li~~~~P~lVL~g~T~~G-------rdlaprlAarL~~~lv 143 (354)
+. ..|.+ +..+..+ ..++.|.+.+++.++|+|++|....+ ..++-++..+..+|++
T Consensus 79 ~~--~~g~~~~~~~~~~~~g---------~~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~~pVl 145 (147)
T 3hgm_A 79 AT--ELGVPADKVRAFVKGG---------RPSRTIVRFARKRECDLVVIGAQGTNGDKSLLLGSVAQRVAGSAHCPVL 145 (147)
T ss_dssp HH--HTTCCGGGEEEEEEES---------CHHHHHHHHHHHTTCSEEEECSSCTTCCSCCCCCHHHHHHHHHCSSCEE
T ss_pred HH--hcCCCccceEEEEecC---------CHHHHHHHHHHHhCCCEEEEeCCCCccccceeeccHHHHHHhhCCCCEE
Confidence 22 25644 2333222 13467888889999999999985433 2567777777777764
No 50
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=69.63 E-value=15 Score=36.88 Aligned_cols=111 Identities=20% Similarity=0.191 Sum_probs=69.8
Q ss_pred cEEEEeCccCCChhcHHHHHHHHHHhCCeecccHhhHhcCCCCCC--ceecc-CC---c-----e-eCCceEEEecccch
Q 018544 236 RIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPND--LQVGQ-TG---K-----I-VAPELYMAFGVSGA 303 (354)
Q Consensus 236 ~iVV~~GrG~~~~e~~~~~~~LA~~lga~vG~SRp~vd~gw~p~~--~qIGq-tG---~-----~-V~P~lYia~GISGa 303 (354)
+-+|-+|.|....+..+.+.+||+++|.-|-+|- .-.|.+|.+ ..+|. .| . . -.+++-|.+|-.=.
T Consensus 211 rpvil~G~g~~~~~a~~~l~~lae~~~~Pv~~t~--~~kg~~~~~~p~~~G~~~g~~~~~~~~~~l~~aDlvl~iG~~~~ 288 (568)
T 2wvg_A 211 KVAVLVGSKLRAAGAEEAAVKFADALGGAVATMA--AAKSFFPEENPHYIGTSWGEVSYPGVEKTMKEADAVIALAPVFN 288 (568)
T ss_dssp CEEEEECTTTTTTTCHHHHHHHHHHHCCEEEEEG--GGTTSSCTTSTTEEEEECGGGSCTTHHHHHHHCSEEEEESCCCB
T ss_pred CCEEEECccccccchHHHHHHHHHHhCCCEEEch--hcCccCCCCCCceeccccCCcCCHHHHHHHHhCCEEEEECCCcc
Confidence 4677777888777778999999999999998774 345677653 45554 23 1 1 24799999996321
Q ss_pred hhhhhcc---CCCcEEEEEcCCCCCCcccccceEEeecHHHHHHHHHhhcc
Q 018544 304 IQHLAGM---RDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKFP 351 (354)
Q Consensus 304 ~QH~~G~---~~s~~IVAIN~D~~ApIf~~aDygiVgD~~~vlp~l~~~l~ 351 (354)
--++.+. .....+|-||.|+.-- .. .+-.--++.+++.+|.+.++
T Consensus 289 ~~~~~~~~~~~~~~~~i~id~d~~~~--~~-~~~~~~~~~~~l~~L~~~l~ 336 (568)
T 2wvg_A 289 DYSTTGWTDIPDPKKLVLAEPRSVVV--NG-IRFPSVHLKDYLTRLAQKVS 336 (568)
T ss_dssp TTTTTTTTCCCCTTTEEEECSSEEEE--TT-EEEESCCHHHHHHHHHHHCC
T ss_pred cccccccccCCCCCcEEEEeCChhhc--CC-eecCCCCHHHHHHHHHHhcc
Confidence 1222221 1223467788887521 11 22222357899999988765
No 51
>1ytl_A Acetyl-COA decarboxylase/synthase complex epsilon 2; structural genomics; 1.80A {Archaeoglobus fulgidus} SCOP: c.31.1.6
Probab=69.08 E-value=2.5 Score=36.39 Aligned_cols=48 Identities=21% Similarity=0.221 Sum_probs=35.2
Q ss_pred CCcEEEEeCccCCChhcHHHHHHHHHHhCCeeccc---HhhHhc-CCCCCCceec
Q 018544 234 SARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGAT---RAVVDA-GFVPNDLQVG 284 (354)
Q Consensus 234 ~A~iVV~~GrG~~~~e~~~~~~~LA~~lga~vG~S---Rp~vd~-gw~p~~~qIG 284 (354)
+-.+|++|| -+ ..+..+.+.+||+. |.=|-.| +-+++. +-.|....+|
T Consensus 36 kRPvIl~Gg-v~-~~~A~~eL~~~ae~-~iPVvtT~~g~g~~~~~~~~p~~~~~G 87 (174)
T 1ytl_A 36 KRPLLIVGP-DM-TDEMFERVKKFVEK-DITVVATGSAITRFIDAGLGEKVNYAV 87 (174)
T ss_dssp SSEEEEECS-CC-CHHHHHHHHHHHTS-SSEEEEETTHHHHHHHTTCGGGSEEEC
T ss_pred CCCEEEECC-CC-CccHHHHHHHHHHc-CCCEEEcccccCcCCCCCCCccccccc
Confidence 345899999 54 46677888999999 9988877 335555 7767666666
No 52
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=62.43 E-value=7.8 Score=37.21 Aligned_cols=82 Identities=12% Similarity=0.122 Sum_probs=53.0
Q ss_pred HHHHHHHhcCCCCcEEEEEEcCCCCHHHHHHHHhhcCCCccEEEEEeCCCCCCCCHHHHHHHHHHHHHhcCccEEEeCCC
Q 018544 45 SAVEAAKSLSDDNSVSMLLAGSGPSFNEAVKHAASSHPSISQVLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASG 124 (354)
Q Consensus 45 ell~~A~~La~~~~V~avv~G~~~~~~~~a~~l~~~~~GaD~V~~~~~~~l~~~~~e~~a~aLa~li~~~~P~lVL~g~T 124 (354)
-++++|++|+ -+++++--.++ ..+. ...-+|+.+.++. ..+.+.+.+.+.++.++.++|.|+.. +
T Consensus 19 ~i~~aa~~lG--~~vv~v~~~~~----~~~~----~~~~~d~~~~~~~----~~d~~~~~~~~~~~~~~~~id~V~~~-~ 83 (425)
T 3vot_A 19 FIFEEAERLG--LKVTFFYNSAE----DFPG----NLPAVERCVPLPL----FEDEEAAMDVVRQTFVEFPFDGVMTL-F 83 (425)
T ss_dssp HHHHHHHHTT--CEEEEEEETTS----CCCC----SCTTEEEEEEECT----TTCHHHHHHHHHHHHHHSCCSEEECC-C
T ss_pred HHHHHHHHCC--CEEEEEECCCc----cccc----CHhhccEEEecCC----CCCHHHHHHHHHHhhhhcCCCEEEEC-C
Confidence 3567899998 55544433332 1111 1235778777653 23678899999999999999988754 3
Q ss_pred CCccchHHHHHHHcCCC
Q 018544 125 SFGKNVLPRAAALLDVS 141 (354)
Q Consensus 125 ~~GrdlaprlAarL~~~ 141 (354)
...-.++.+++.+||.|
T Consensus 84 e~~~~~~a~l~e~lglp 100 (425)
T 3vot_A 84 EPALPFTAKAAEALNLP 100 (425)
T ss_dssp GGGHHHHHHHHHHTTCS
T ss_pred chhHHHHHHHHHHcCCC
Confidence 33446677777777776
No 53
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=62.41 E-value=27 Score=27.48 Aligned_cols=103 Identities=10% Similarity=0.068 Sum_probs=58.6
Q ss_pred ceeEEEEEecCCccChHHHHHHHHHHhcCC--CCcEEEEEEcCCC-----------------C-------HHHHHHHHhh
Q 018544 26 ISTLVLGEHENGSIKSQSLSAVEAAKSLSD--DNSVSMLLAGSGP-----------------S-------FNEAVKHAAS 79 (354)
Q Consensus 26 ~~IlV~~E~~~g~l~~~slell~~A~~La~--~~~V~avv~G~~~-----------------~-------~~~~a~~l~~ 79 (354)
.+|+|-.+.. +.+..++..|.+|+. +.+++++-+-+.. . .++..+++.
T Consensus 7 ~~ILv~vD~s-----~~s~~al~~a~~la~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~- 80 (150)
T 3tnj_A 7 HHILLAVDFS-----SEDSQVVQKVRNLASQIGARLSLIHVLDNIPMPDTPYGTAIPLDTETTYDAMLDVEKQKLSQIG- 80 (150)
T ss_dssp SEEEEECCCS-----TTHHHHHHHHHHHHHHHTCEEEEEEEEC--------CTTCCCSSSCCCHHHHHHHHHHHHHHHH-
T ss_pred ceEEEEeCCC-----HHHHHHHHHHHHHHhhcCCEEEEEEEEcCccccccccccccCcCHHHHHHHHHHHHHHHHHHHH-
Confidence 4577777643 358888888888876 5788877653210 0 011112222
Q ss_pred cCCCcc--EEEEEeCCCCCCCCHHHHHHHHHHHHHhcCccEEEeCCCCCc------cchHHHHHHHcCCCce
Q 018544 80 SHPSIS--QVLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFG------KNVLPRAAALLDVSPI 143 (354)
Q Consensus 80 ~~~GaD--~V~~~~~~~l~~~~~e~~a~aLa~li~~~~P~lVL~g~T~~G------rdlaprlAarL~~~lv 143 (354)
..+|.+ +..+... ..++.|.+.+++.++|+|++|....+ ..++-++..+..+|++
T Consensus 81 ~~~~~~~~~~~~~~g---------~~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~Gs~~~~vl~~~~~pVl 143 (150)
T 3tnj_A 81 NTLGIDPAHRWLVWG---------EPREEIIRIAEQENVDLIVVGSHGRHGLALLLGSTANSVLHYAKCDVL 143 (150)
T ss_dssp HHHTCCGGGEEEEES---------CHHHHHHHHHHHTTCSEEEEEEC--------CCCHHHHHHHHCSSEEE
T ss_pred HHcCCCcceEEEecC---------CHHHHHHHHHHHcCCCEEEEecCCCCCcCeEecchHHHHHHhCCCCEE
Confidence 123544 2332222 13467888888999999999976433 2445666666666654
No 54
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=62.03 E-value=3 Score=39.09 Aligned_cols=43 Identities=9% Similarity=-0.019 Sum_probs=29.4
Q ss_pred HHHHHHHHHhcCccEEEeCCCCCccchHHHHHHHcCCCceeeeEEe
Q 018544 104 AKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDVIEI 149 (354)
Q Consensus 104 a~aLa~li~~~~P~lVL~g~T~~GrdlaprlAarL~~~lvtdv~~l 149 (354)
...+.+++++.+||+|+.-.. --.+..+|.+++.|++.-....
T Consensus 103 ~~~l~~~l~~~~PD~Vv~~~~---~~~~~~aa~~~giP~v~~~~~~ 145 (391)
T 3tsa_A 103 LPEYLRLAEAWRPSVLLVDVC---ALIGRVLGGLLDLPVVLHRWGV 145 (391)
T ss_dssp HHHHHHHHHHHCCSEEEEETT---CHHHHHHHHHTTCCEEEECCSC
T ss_pred HHHHHHHHHhcCCCEEEeCcc---hhHHHHHHHHhCCCEEEEecCC
Confidence 445677788889999988421 1234566778999988765443
No 55
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=60.94 E-value=38 Score=26.22 Aligned_cols=86 Identities=10% Similarity=0.078 Sum_probs=50.8
Q ss_pred ceeEEEEEecCCccChHHHHHHHHHHhcCC--CCcEEEEEEc-CCC--------------------CHHHHHHHHhhcCC
Q 018544 26 ISTLVLGEHENGSIKSQSLSAVEAAKSLSD--DNSVSMLLAG-SGP--------------------SFNEAVKHAASSHP 82 (354)
Q Consensus 26 ~~IlV~~E~~~g~l~~~slell~~A~~La~--~~~V~avv~G-~~~--------------------~~~~~a~~l~~~~~ 82 (354)
.+|+|-.+.. +.+..++..|.+|++ +.+++++-+- ..+ ..++..+++. ...
T Consensus 3 ~~ILv~~D~s-----~~s~~al~~a~~la~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~ 76 (141)
T 1jmv_A 3 KHILVAVDLS-----EESPILLKKAVGIAKRHDAKLSIIHVDVNFSDLYTGLIDVNMSSMQDRISTETQKALLDLA-ESV 76 (141)
T ss_dssp SEEEEEECCS-----TTHHHHHHHHHHHHHHHTCEEEEEEEEECCGGGCCCCEEHHHHHHTTCCCCHHHHHHHHHH-HHS
T ss_pred ceEEEEecCc-----hhhHHHHHHHHHHHHhcCCEEEEEEEecCchhhhccccccchHHHHHHHHHHHHHHHHHHH-HHc
Confidence 4677777643 347778888888875 5778877543 200 0111222332 124
Q ss_pred CccE--EEEEeCCCCCCCCHHHHHHHHHHHHHhcCccEEEeCCCCCc
Q 018544 83 SISQ--VLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFG 127 (354)
Q Consensus 83 GaD~--V~~~~~~~l~~~~~e~~a~aLa~li~~~~P~lVL~g~T~~G 127 (354)
|.+. ..+... ..++.|.+.+++.++|+|++|.. .+
T Consensus 77 ~~~~~~~~~~~g---------~~~~~I~~~a~~~~~dliV~G~~-~~ 113 (141)
T 1jmv_A 77 DYPISEKLSGSG---------DLGQVLSDAIEQYDVDLLVTGHH-QD 113 (141)
T ss_dssp SSCCCCEEEEEE---------CHHHHHHHHHHHTTCCEEEEEEC-CC
T ss_pred CCCceEEEEecC---------CHHHHHHHHHHhcCCCEEEEeCC-Cc
Confidence 6542 222211 13567888888999999999987 54
No 56
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum}
Probab=59.84 E-value=61 Score=25.61 Aligned_cols=106 Identities=16% Similarity=0.104 Sum_probs=63.0
Q ss_pred cceeEEEEEecCCccChHHHHHHHHHHhcCC--CCcEEEEEEcCCCC----------------------HHHHHHHHhhc
Q 018544 25 SISTLVLGEHENGSIKSQSLSAVEAAKSLSD--DNSVSMLLAGSGPS----------------------FNEAVKHAASS 80 (354)
Q Consensus 25 ~~~IlV~~E~~~g~l~~~slell~~A~~La~--~~~V~avv~G~~~~----------------------~~~~a~~l~~~ 80 (354)
+.+|+|-.+.. ..+.+..++..|.+|++ +.+++++-+-+... .+.+.+.+.
T Consensus 15 ~~~ILv~vD~~---~s~~s~~al~~a~~la~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-- 89 (156)
T 3fg9_A 15 YRRILLTVDED---DNTSSERAFRYATTLAHDYDVPLGICSVLESEDINIFDSLTPSKIQAKRKHVEDVVAEYVQLAE-- 89 (156)
T ss_dssp CC-EEEECCSC---CCHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CceEEEEECCC---CCHHHHHHHHHHHHHHHhcCCEEEEEEEEeCCCccccccCCHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 34577777611 13578888999888876 67888886643210 111222232
Q ss_pred CCCcc--EEEEEeCCCCCCCCHHHHHHHHHHH-HHhcCccEEEeCCCCCc------cchHHHHHHHcCCCce
Q 018544 81 HPSIS--QVLVADSDKFAYPIAEPWAKLVHMI-QQREKYSHIISASGSFG------KNVLPRAAALLDVSPI 143 (354)
Q Consensus 81 ~~GaD--~V~~~~~~~l~~~~~e~~a~aLa~l-i~~~~P~lVL~g~T~~G------rdlaprlAarL~~~lv 143 (354)
..|.+ +..+..+ - ..++.|.+. +++.++|+|++|....+ ..++-++..+..+|++
T Consensus 90 ~~g~~~~~~~v~~~-----g---~~~~~I~~~~a~~~~~DlIV~G~~g~~~~~~~~Gs~~~~vl~~a~~PVl 153 (156)
T 3fg9_A 90 QRGVNQVEPLVYEG-----G---DVDDVILEQVIPEFKPDLLVTGADTEFPHSKIAGAIGPRLARKAPISVI 153 (156)
T ss_dssp HHTCSSEEEEEEEC-----S---CHHHHHHHTHHHHHCCSEEEEETTCCCTTSSSCSCHHHHHHHHCSSEEE
T ss_pred HcCCCceEEEEEeC-----C---CHHHHHHHHHHHhcCCCEEEECCCCCCccceeecchHHHHHHhCCCCEE
Confidence 25764 3333330 1 134667777 88899999999985433 2556677777777754
No 57
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=59.73 E-value=74 Score=27.75 Aligned_cols=99 Identities=9% Similarity=0.128 Sum_probs=56.9
Q ss_pred eeEEEEEecCCccChHHHHHHHHHHhcCC-CCcEEEEEEcCCCCHHHHHHHHhhcCCCccEEEEEeCCCCCCCCHHHHHH
Q 018544 27 STLVLGEHENGSIKSQSLSAVEAAKSLSD-DNSVSMLLAGSGPSFNEAVKHAASSHPSISQVLVADSDKFAYPIAEPWAK 105 (354)
Q Consensus 27 ~IlV~~E~~~g~l~~~slell~~A~~La~-~~~V~avv~G~~~~~~~~a~~l~~~~~GaD~V~~~~~~~l~~~~~e~~a~ 105 (354)
+|.|++-..+ ..|+.|-.+.+-.+ +.+|.+|+--++. ... .+.+. .+|.. +++++...+. +.+.+-+
T Consensus 2 riaVl~SG~G-----s~L~aLi~~~~~~~~~~~I~~Vvs~~~~-~~~-~~~A~--~~gIp-~~~~~~~~~~--~r~~~~~ 69 (209)
T 1meo_A 2 RVAVLISGTG-----SNLQALIDSTREPNSSAQIDIVISNKAA-VAG-LDKAE--RAGIP-TRVINHKLYK--NRVEFDS 69 (209)
T ss_dssp EEEEEESSSC-----TTHHHHHHHHHSTTCSCEEEEEEESSTT-CHH-HHHHH--HTTCC-EEECCGGGSS--SHHHHHH
T ss_pred eEEEEEECCc-----hHHHHHHHHHhcCCCCcEEEEEEeCCCC-hHH-HHHHH--HcCCC-EEEECccccC--chhhhhH
Confidence 4666664433 46776655544333 3678887776542 122 22222 37887 5555543332 3455666
Q ss_pred HHHHHHHhcCccEEEeCCCCCccchHHHHHHHcC
Q 018544 106 LVHMIQQREKYSHIISASGSFGKNVLPRAAALLD 139 (354)
Q Consensus 106 aLa~li~~~~P~lVL~g~T~~GrdlaprlAarL~ 139 (354)
.+.+.+++.+||+|++.+ +++-+.+.+=....
T Consensus 70 ~~~~~l~~~~~Dliv~a~--y~~il~~~~l~~~~ 101 (209)
T 1meo_A 70 AIDLVLEEFSIDIVCLAG--FMRILSGPFVQKWN 101 (209)
T ss_dssp HHHHHHHHTTCCEEEEES--CCSCCCHHHHHHTT
T ss_pred HHHHHHHhcCCCEEEEcc--hhhhCCHHHHhhhc
Confidence 777888999999998765 45555554444443
No 58
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=59.50 E-value=7.6 Score=36.37 Aligned_cols=41 Identities=12% Similarity=0.171 Sum_probs=29.0
Q ss_pred HHHHHHHHhcCccEEEeCCCCCccchHHHHHHHcCCCceeeeEE
Q 018544 105 KLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDVIE 148 (354)
Q Consensus 105 ~aLa~li~~~~P~lVL~g~T~~GrdlaprlAarL~~~lvtdv~~ 148 (354)
..+.+++++.+||+|+.-....+ ++.+|.+++.|++.....
T Consensus 120 ~~l~~~l~~~~pDvVv~~~~~~~---~~~aa~~~giP~v~~~~~ 160 (412)
T 3otg_A 120 DELQPVIERLRPDLVVQEISNYG---AGLAALKAGIPTICHGVG 160 (412)
T ss_dssp HHHHHHHHHHCCSEEEEETTCHH---HHHHHHHHTCCEEEECCS
T ss_pred HHHHHHHHhcCCCEEEECchhhH---HHHHHHHcCCCEEEeccc
Confidence 56677888889999977533222 556778899998865443
No 59
>1q74_A 1D-MYO-inosityl 2-acetamido-2-deoxy-alpha-D- glucopyranoside deacetylase (MSHB); rossmann fold, zinc aminohydrolase; HET: PE4; 1.70A {Mycobacterium tuberculosis} SCOP: c.134.1.1 PDB: 1q7t_A*
Probab=58.58 E-value=30 Score=32.01 Aligned_cols=41 Identities=7% Similarity=-0.006 Sum_probs=30.0
Q ss_pred CCCccEEEEEe------CCCCC-----------CCCHHHHHHHHHHHHHhcCccEEEe
Q 018544 81 HPSISQVLVAD------SDKFA-----------YPIAEPWAKLVHMIQQREKYSHIIS 121 (354)
Q Consensus 81 ~~GaD~V~~~~------~~~l~-----------~~~~e~~a~aLa~li~~~~P~lVL~ 121 (354)
..|++.+++++ |..+. .++.+.....|.+++++.+|++|+.
T Consensus 78 ~LGv~~~~~L~~~~~~~D~~l~~~~~~~~p~~~~~~~~~~~~~l~~~ir~~rP~vV~t 135 (303)
T 1q74_A 78 ALGVSAPIYLGGAGRWRDSGMAGTDQRSQRRFVDADPRQTVGALVAIIRELRPHVVVT 135 (303)
T ss_dssp HTTCCCCEETTSTTSSBCCCCC----CCSCBGGGSCHHHHHHHHHHHHHHHCCSEEEE
T ss_pred HhCCCeeEECCCCCcCCCCCCCCCccccCcccccCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 57998766654 22222 1256788899999999999999987
No 60
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=58.37 E-value=72 Score=25.79 Aligned_cols=106 Identities=13% Similarity=0.103 Sum_probs=63.3
Q ss_pred cccceeEEEEEecCCccChHHHHHHHHHHhcCC-CCcEEEE--EEcCCC-------------------CH----HHHHHH
Q 018544 23 SRSISTLVLGEHENGSIKSQSLSAVEAAKSLSD-DNSVSML--LAGSGP-------------------SF----NEAVKH 76 (354)
Q Consensus 23 ~~~~~IlV~~E~~~g~l~~~slell~~A~~La~-~~~V~av--v~G~~~-------------------~~----~~~a~~ 76 (354)
..+.+|+|-.+. .+.+..++..|.+|++ +.+++++ -+-+.. .. +.+.+.
T Consensus 15 ~~~~~ILv~vD~-----s~~s~~al~~A~~lA~~~a~l~ll~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 89 (163)
T 1tq8_A 15 SAYKTVVVGTDG-----SDSSMRAVDRAAQIAGADAKLIIASAYLPQHEDARAADILKDESYKVTGTAPIYEILHDAKER 89 (163)
T ss_dssp CCCCEEEEECCS-----SHHHHHHHHHHHHHHTTTSEEEEEEECCC--------------------CCTHHHHHHHHHHH
T ss_pred ccCCEEEEEcCC-----CHHHHHHHHHHHHHhCCCCEEEEEEeeeccCcccccccccccHHHHHHHHHHHHHHHHHHHHH
Confidence 344668877763 3568888888888875 5677777 321100 01 122233
Q ss_pred HhhcCCCccEE-EEEeCCCCCCCCHHHHHHHHHHHHHhcCccEEEeCCCCCcc-------chHHHHHHHcCCCce
Q 018544 77 AASSHPSISQV-LVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGK-------NVLPRAAALLDVSPI 143 (354)
Q Consensus 77 l~~~~~GaD~V-~~~~~~~l~~~~~e~~a~aLa~li~~~~P~lVL~g~T~~Gr-------dlaprlAarL~~~lv 143 (354)
+. ..|++.+ +.+.. + + .++.|.+.+++.++|+|++|....+. .++-++.....+|++
T Consensus 90 ~~--~~gv~~v~~~v~~----G-~---~~~~I~~~a~~~~~DLIV~G~~g~~~~~~~~lGSva~~vl~~a~~PVl 154 (163)
T 1tq8_A 90 AH--NAGAKNVEERPIV----G-A---PVDALVNLADEEKADLLVVGNVGLSTIAGRLLGSVPANVSRRAKVDVL 154 (163)
T ss_dssp HH--TTTCCEEEEEEEC----S-S---HHHHHHHHHHHTTCSEEEEECCCCCSHHHHHTBBHHHHHHHHTTCEEE
T ss_pred HH--HcCCCeEEEEEec----C-C---HHHHHHHHHHhcCCCEEEECCCCCCcccceeeccHHHHHHHhCCCCEE
Confidence 33 3677622 22211 1 2 35678888889999999999865442 556677777766654
No 61
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=57.85 E-value=14 Score=35.06 Aligned_cols=107 Identities=16% Similarity=0.138 Sum_probs=55.0
Q ss_pred ceeEEEEEecCCccChHHHHHHHHHHhcCC-CCcEEEEEEcCCCCHHHHHHHHhhcCCCccEEEEEeCCC---------C
Q 018544 26 ISTLVLGEHENGSIKSQSLSAVEAAKSLSD-DNSVSMLLAGSGPSFNEAVKHAASSHPSISQVLVADSDK---------F 95 (354)
Q Consensus 26 ~~IlV~~E~~~g~l~~~slell~~A~~La~-~~~V~avv~G~~~~~~~~a~~l~~~~~GaD~V~~~~~~~---------l 95 (354)
|+|+++.....|.+.+ ++.-|+.|.+ |.+|+.+.-+ + ..+..+ ..|.+-+-+-.++. .
T Consensus 1 MrIli~~~gt~Ghv~p----~~~La~~L~~~Gh~V~v~~~~-~--~~~~v~-----~~g~~~~~l~~~~~~~~~~~~~~~ 68 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEP----LVALAARLRELGADARMCLPP-D--YVERCA-----EVGVPMVPVGRAVRAGAREPGELP 68 (404)
T ss_dssp -CEEEEEESSHHHHHH----HHHHHHHHHHTTCCEEEEECG-G--GHHHHH-----HTTCCEEECSSCSSGGGSCTTCCC
T ss_pred CeEEEEeCCCCccHHH----HHHHHHHHHHCCCeEEEEeCH-H--HHHHHH-----HcCCceeecCCCHHHHhccccCCH
Confidence 6788887655554433 4456666754 5677765432 2 333332 25776443322211 0
Q ss_pred CCCCHHHHHHHHHHHHHh-----cCccEEEeCCCCCccchHHHHHHHcCCCceee
Q 018544 96 AYPIAEPWAKLVHMIQQR-----EKYSHIISASGSFGKNVLPRAAALLDVSPITD 145 (354)
Q Consensus 96 ~~~~~e~~a~aLa~li~~-----~~P~lVL~g~T~~GrdlaprlAarL~~~lvtd 145 (354)
..+ .......+.+..++ .+||+|+.......--.+..+|.++|+|+++-
T Consensus 69 ~~~-~~~~~~~~~~~~~~l~~~~~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~ 122 (404)
T 3h4t_A 69 PGA-AEVVTEVVAEWFDKVPAAIEGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYT 122 (404)
T ss_dssp TTC-GGGHHHHHHHHHHHHHHHHTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHH-HHHHHHHHHHHHHHHHHHhcCCCEEEECCchhhhhhhhhHHhhcCCCEEEE
Confidence 001 11122222222222 37999987554333334478899999998843
No 62
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=57.75 E-value=17 Score=36.51 Aligned_cols=110 Identities=17% Similarity=0.171 Sum_probs=64.2
Q ss_pred cEEEEeCccCCChhcHHHHHHHHHHhCCeecccHhhHhcCCCCCC--ceecc-CC---c-----ee-CCceEEEecccch
Q 018544 236 RIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPND--LQVGQ-TG---K-----IV-APELYMAFGVSGA 303 (354)
Q Consensus 236 ~iVV~~GrG~~~~e~~~~~~~LA~~lga~vG~SRp~vd~gw~p~~--~qIGq-tG---~-----~V-~P~lYia~GISGa 303 (354)
+-+|-+|.|+...+..+.+.+||+++|.-|-+|- --.|.+|.+ ..+|. .| . .+ .+++-|.+|-.=.
T Consensus 224 rpvIl~G~g~~~~~a~~~l~~lae~~~~Pv~~t~--~~~g~~~~~~p~~~G~~~g~~~~~~~~~~l~~aDlvl~iG~~~~ 301 (565)
T 2nxw_A 224 SPVLMVCVEVRRYGLEAKVAELAQRLGVPVVTTF--MGRGLLADAPTPPLGTYIGVAGDAEITRLVEESDGLFLLGAILS 301 (565)
T ss_dssp SEEEEECHHHHHTTCHHHHHHHHHHHCSCEEECG--GGTTTTTTSSSCCSCBCCGGGSCHHHHHHHHTCSEEEEESCCBC
T ss_pred CCEEEECCCcchhchHHHHHHHHHHhCCCEEECc--ccCccCCCCCCccccccCcccCCHHHHHHHHhCCEEEEECCCcc
Confidence 3555666676555567899999999999887763 345666543 34554 23 2 12 3899999996311
Q ss_pred hhhhh----ccCCCcEEEEEcCCCCCCcccccceEEeecHHHHHHHHHhhcc
Q 018544 304 IQHLA----GMRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKFP 351 (354)
Q Consensus 304 ~QH~~----G~~~s~~IVAIN~D~~ApIf~~aDygiVgD~~~vlp~l~~~l~ 351 (354)
...+. ... .+.+|-|+.|+.- +.+. +-.--.+.+++.+|.+.++
T Consensus 302 ~~~~~~~~~~~~-~~~~i~i~~d~~~-~~~~--~~~~~~~~~~l~~L~~~l~ 349 (565)
T 2nxw_A 302 DTNFAVSQRKID-LRKTIHAFDRAVT-LGYH--TYADIPLAGLVDALLERLP 349 (565)
T ss_dssp SSTTSBCTTTSC-GGGEEEEETTEEE-ETTE--EEESCCHHHHHHHHHHTSC
T ss_pred ccccccccccCC-CCcEEEEeCCcee-eCCc--ccCCccHHHHHHHHHHhcc
Confidence 11121 122 2457778887652 2221 1111234678888887664
No 63
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=56.58 E-value=9.5 Score=35.86 Aligned_cols=109 Identities=16% Similarity=0.073 Sum_probs=59.5
Q ss_pred ccccceeEEEEEecCCccChHHHHHHHHHHhcCC-CCcEEEEEEcCCCCHHHHHHHHhhcCCCccEEEEEeCCCCCCCCH
Q 018544 22 ISRSISTLVLGEHENGSIKSQSLSAVEAAKSLSD-DNSVSMLLAGSGPSFNEAVKHAASSHPSISQVLVADSDKFAYPIA 100 (354)
Q Consensus 22 ~~~~~~IlV~~E~~~g~l~~~slell~~A~~La~-~~~V~avv~G~~~~~~~~a~~l~~~~~GaD~V~~~~~~~l~~~~~ 100 (354)
-.++|.|+++.-...|.+.+. +.-|++|.+ +.+|+.+.-+ . ..+.. . ..|.+ ++.+..+ +.....
T Consensus 17 ~~~m~rIl~~~~~~~GHv~p~----l~La~~L~~~Gh~V~v~~~~-~--~~~~~---~--~~G~~-~~~~~~~-~~~~~~ 82 (415)
T 3rsc_A 17 GRHMAHLLIVNVASHGLILPT----LTVVTELVRRGHRVSYVTAG-G--FAEPV---R--AAGAT-VVPYQSE-IIDADA 82 (415)
T ss_dssp --CCCEEEEECCSCHHHHGGG----HHHHHHHHHTTCEEEEEECG-G--GHHHH---H--HTTCE-EEECCCS-TTTCCH
T ss_pred cccCCEEEEEeCCCccccccH----HHHHHHHHHCCCEEEEEeCH-H--HHHHH---H--hcCCE-EEecccc-cccccc
Confidence 456789998875555555543 344555543 4677766532 2 23322 2 25665 3333322 111111
Q ss_pred ---------------------HHHHHHHHHHHHhcCccEEEeCCCCCccchHHHHHHHcCCCceeee
Q 018544 101 ---------------------EPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDV 146 (354)
Q Consensus 101 ---------------------e~~a~aLa~li~~~~P~lVL~g~T~~GrdlaprlAarL~~~lvtdv 146 (354)
......+.+++++.+||+|++.. . ---.++.+|.++++|++.-.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PDlVi~d~-~-~~~~~~~aA~~~giP~v~~~ 147 (415)
T 3rsc_A 83 AEVFGSDDLGVRPHLMYLRENVSVLRATAEALDGDVPDLVLYDD-F-PFIAGQLLAARWRRPAVRLS 147 (415)
T ss_dssp HHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHSSSCCSEEEEES-T-THHHHHHHHHHTTCCEEEEE
T ss_pred chhhccccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECc-h-hhhHHHHHHHHhCCCEEEEE
Confidence 12234566677788999999631 1 11235677889999988755
No 64
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=56.46 E-value=7.4 Score=36.12 Aligned_cols=117 Identities=9% Similarity=0.002 Sum_probs=56.6
Q ss_pred cccceeEEEEEecC---CccChHHHHHHHHHHhcCCCCcEEEEEEcCCCCHHHHHHHHhhcCCCccEEEEEeC--CCCCC
Q 018544 23 SRSISTLVLGEHEN---GSIKSQSLSAVEAAKSLSDDNSVSMLLAGSGPSFNEAVKHAASSHPSISQVLVADS--DKFAY 97 (354)
Q Consensus 23 ~~~~~IlV~~E~~~---g~l~~~slell~~A~~La~~~~V~avv~G~~~~~~~~a~~l~~~~~GaD~V~~~~~--~~l~~ 97 (354)
..+|+|+++..... |.......+++..-.+. +.+|+.+...... ....+... ..| +++.+.. .....
T Consensus 18 ~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~--~~~~~~~~--~~~--~~~~~~~~~~~~~~ 89 (406)
T 2gek_A 18 GSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDA--GHEVSVLAPASPH--VKLPDYVV--SGG--KAVPIPYNGSVARL 89 (406)
T ss_dssp ---CEEEEECSSCTTSCCHHHHHHHHHHHHHHHT--TCEEEEEESCCTT--SCCCTTEE--ECC--CCC-----------
T ss_pred CCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHC--CCeEEEEecCCcc--ccCCcccc--cCC--cEEeccccCCcccc
Confidence 45799999986432 33333444444333333 3677776665431 10000000 012 2222211 00000
Q ss_pred CCHHHHHHHHHHHHHhcCccEEEeCCCCCccchHHHHHHHcCCCceeeeEE
Q 018544 98 PIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDVIE 148 (354)
Q Consensus 98 ~~~e~~a~aLa~li~~~~P~lVL~g~T~~GrdlaprlAarL~~~lvtdv~~ 148 (354)
.........+.+++++.+||+|++...... .++..++..++.|++.++-+
T Consensus 90 ~~~~~~~~~l~~~l~~~~~Dii~~~~~~~~-~~~~~~~~~~~~~~i~~~h~ 139 (406)
T 2gek_A 90 RFGPATHRKVKKWIAEGDFDVLHIHEPNAP-SLSMLALQAAEGPIVATFHT 139 (406)
T ss_dssp -CCHHHHHHHHHHHHHHCCSEEEEECCCSS-SHHHHHHHHEESSEEEEECC
T ss_pred cccHHHHHHHHHHHHhcCCCEEEECCccch-HHHHHHHHhcCCCEEEEEcC
Confidence 111223456778888889999998654433 33556666678998876655
No 65
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=56.43 E-value=1e+02 Score=26.89 Aligned_cols=101 Identities=13% Similarity=0.120 Sum_probs=57.8
Q ss_pred ceeEEEEEecCCccChHHHHHHHHHHhcCC-CCcEEEEEEcCCCCHHHHHHHHhhcCCCccEEEEEeCCCCCCCCHHHHH
Q 018544 26 ISTLVLGEHENGSIKSQSLSAVEAAKSLSD-DNSVSMLLAGSGPSFNEAVKHAASSHPSISQVLVADSDKFAYPIAEPWA 104 (354)
Q Consensus 26 ~~IlV~~E~~~g~l~~~slell~~A~~La~-~~~V~avv~G~~~~~~~~a~~l~~~~~GaD~V~~~~~~~l~~~~~e~~a 104 (354)
|+|.|++=..+ ..++.|-.+.+-++ +.+|.+|+--.++ ....+.+. .+|.. ++.++...+. +.+.|-
T Consensus 1 ~ri~vl~Sg~g-----snl~ali~~~~~~~~~~~i~~Vis~~~~--~~~~~~A~--~~gIp-~~~~~~~~~~--~r~~~~ 68 (212)
T 1jkx_A 1 MNIVVLISGNG-----SNLQAIIDACKTNKIKGTVRAVFSNKAD--AFGLERAR--QAGIA-THTLIASAFD--SREAYD 68 (212)
T ss_dssp CEEEEEESSCC-----HHHHHHHHHHHTTSSSSEEEEEEESCTT--CHHHHHHH--HTTCE-EEECCGGGCS--SHHHHH
T ss_pred CEEEEEEECCc-----HHHHHHHHHHHcCCCCceEEEEEeCCCc--hHHHHHHH--HcCCc-EEEeCccccc--chhhcc
Confidence 35666664332 34665555544332 3578777765431 22222222 37887 5555443332 346677
Q ss_pred HHHHHHHHhcCccEEEeCCCCCccchHHHHHHHcCC
Q 018544 105 KLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDV 140 (354)
Q Consensus 105 ~aLa~li~~~~P~lVL~g~T~~GrdlaprlAarL~~ 140 (354)
+.+.+.+++.+||+|++.+ +++-+.+.+=.....
T Consensus 69 ~~~~~~l~~~~~Dliv~ag--y~~il~~~~l~~~~~ 102 (212)
T 1jkx_A 69 RELIHEIDMYAPDVVVLAG--FMRILSPAFVSHYAG 102 (212)
T ss_dssp HHHHHHHGGGCCSEEEESS--CCSCCCHHHHHHTTT
T ss_pred HHHHHHHHhcCCCEEEEeC--hhhhCCHHHHhhccC
Confidence 7788899999999999874 455555555444443
No 66
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*
Probab=54.01 E-value=14 Score=36.96 Aligned_cols=110 Identities=15% Similarity=0.066 Sum_probs=66.6
Q ss_pred cEEEEeCccCCChhcHHHHHHHHHHhCCeecccHhhHhcCCCCCC--ceecc-CCc---------eeCCceEEEecccch
Q 018544 236 RIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPND--LQVGQ-TGK---------IVAPELYMAFGVSGA 303 (354)
Q Consensus 236 ~iVV~~GrG~~~~e~~~~~~~LA~~lga~vG~SRp~vd~gw~p~~--~qIGq-tG~---------~V~P~lYia~GISGa 303 (354)
+-+|-+|.|....+..+.+.+||+++|.-|-+|-- -.|.+|.+ ..+|. .|. .=.+++-|++|-.=.
T Consensus 213 rpvIl~G~g~~~~~a~~~l~~lae~~~~Pv~~t~~--g~g~~~~~~p~~~G~~~g~~~~~~~~~~l~~aDlvl~iG~~~~ 290 (563)
T 2vk8_A 213 NPVILADACCSRHDVKAETKKLIDLTQFPAFVTPM--GKGSIDEQHPRYGGVYVGTLSKPEVKEAVESADLILSVGALLS 290 (563)
T ss_dssp SEEEEECHHHHHTTCHHHHHHHHHHHCCCEEECTT--TTTSSCTTSTTEEEECCGGGSCHHHHHHHHTCSEEEEESCCCC
T ss_pred CCEEEECcCccccchHHHHHHHHHHhCCCEEECcc--cCccCCCCCCcccccccCccCCHHHHHHHHhCCEEEEECCCCc
Confidence 45666777776556778999999999998877744 44666643 45665 232 126799999995321
Q ss_pred hhhhhc----cCCCcEEEEEcCCCCCCcccccceEEeecHHHHHHHHHhhcc
Q 018544 304 IQHLAG----MRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKFP 351 (354)
Q Consensus 304 ~QH~~G----~~~s~~IVAIN~D~~ApIf~~aDygiVgD~~~vlp~l~~~l~ 351 (354)
.-.+.+ ..+. .||-||.|+.- |-+ .+-.--++.+++.+|++.++
T Consensus 291 ~~~~~~~~~~~~~~-~~i~id~d~~~-~~~--~~~~~~~~~~~l~~L~~~l~ 338 (563)
T 2vk8_A 291 DFNTGSFSYSYKTK-NIVEFHSDHMK-IRN--ATFPGVQMKFVLQKLLTTIA 338 (563)
T ss_dssp TTTTTTTCCCCCCS-CEEEECSSEEE-ETT--EEEETCCHHHHHHHHHHHHH
T ss_pred cccccccccCCCCC-eEEEEeCCceE-ECC--cccCCcCHHHHHHHHHHhhc
Confidence 111212 1233 46778888742 111 01122246888888887653
No 67
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=52.93 E-value=99 Score=27.14 Aligned_cols=100 Identities=13% Similarity=0.153 Sum_probs=57.5
Q ss_pred cceeEEEEEecCCccChHHHHHHHHHHh--cCCCCcEEEEEEcCCCCHHHHHHHHhhcCCCccEEEEEeCCCCCCCCHHH
Q 018544 25 SISTLVLGEHENGSIKSQSLSAVEAAKS--LSDDNSVSMLLAGSGPSFNEAVKHAASSHPSISQVLVADSDKFAYPIAEP 102 (354)
Q Consensus 25 ~~~IlV~~E~~~g~l~~~slell~~A~~--La~~~~V~avv~G~~~~~~~~a~~l~~~~~GaD~V~~~~~~~l~~~~~e~ 102 (354)
.++|.|++--.+ ..++.|-.+.+ +. .+|.+|+--..+ ... .+.+. .+|.. +++++...+. +-+.
T Consensus 5 ~~riavl~SG~G-----snl~all~~~~~~~~--~eI~~Vis~~~~-a~~-~~~A~--~~gIp-~~~~~~~~~~--~r~~ 70 (215)
T 3tqr_A 5 PLPIVVLISGNG-----TNLQAIIGAIQKGLA--IEIRAVISNRAD-AYG-LKRAQ--QADIP-THIIPHEEFP--SRTD 70 (215)
T ss_dssp CEEEEEEESSCC-----HHHHHHHHHHHTTCS--EEEEEEEESCTT-CHH-HHHHH--HTTCC-EEECCGGGSS--SHHH
T ss_pred CcEEEEEEeCCc-----HHHHHHHHHHHcCCC--CEEEEEEeCCcc-hHH-HHHHH--HcCCC-EEEeCccccC--chhH
Confidence 467777774332 45555544433 33 577776664431 222 12222 37887 5555543332 3456
Q ss_pred HHHHHHHHHHhcCccEEEeCCCCCccchHHHHHHHcCC
Q 018544 103 WAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDV 140 (354)
Q Consensus 103 ~a~aLa~li~~~~P~lVL~g~T~~GrdlaprlAarL~~ 140 (354)
+-..+.+.+++.+||+|++.+ +++-+.+.+=.....
T Consensus 71 ~d~~~~~~l~~~~~Dliv~ag--y~~il~~~~l~~~~~ 106 (215)
T 3tqr_A 71 FESTLQKTIDHYDPKLIVLAG--FMRKLGKAFVSHYSG 106 (215)
T ss_dssp HHHHHHHHHHTTCCSEEEESS--CCSCCCHHHHHHTTT
T ss_pred hHHHHHHHHHhcCCCEEEEcc--chhhCCHHHHhhccC
Confidence 667788899999999999865 455555555555443
No 68
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*
Probab=52.27 E-value=13 Score=37.52 Aligned_cols=111 Identities=15% Similarity=0.131 Sum_probs=66.8
Q ss_pred cEEEEeCccCCChhcHHHHHHHHHHhCCeecccHhhHhcCCCCC--Cceecc----CCc------eeCCceEEEecccch
Q 018544 236 RIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPN--DLQVGQ----TGK------IVAPELYMAFGVSGA 303 (354)
Q Consensus 236 ~iVV~~GrG~~~~e~~~~~~~LA~~lga~vG~SRp~vd~gw~p~--~~qIGq----tG~------~V~P~lYia~GISGa 303 (354)
+-+|-+|.|+...+..+.+.+||+++|.-|-+|- .-.|.+|. ...+|. .|. .=.+++-|.+|-.=.
T Consensus 230 rpvil~G~g~~~~~a~~~l~~lae~~~~Pv~~t~--~~~g~~~~~~p~~~G~~~g~~~~~~~~~~l~~aDlvl~iG~~~~ 307 (570)
T 2vbf_A 230 KPVVIAGHEVISFGLEKTVTQFVSETKLPITTLN--FGKSAVDESLPSFLGIYNGKLSEISLKNFVESADFILMLGVKLT 307 (570)
T ss_dssp SEEEEECHHHHHTTCHHHHHHHHHHHCCCEEECS--TTTTSSCTTSTTEEEECCGGGSCHHHHHHHHHCSEEEEESCCCC
T ss_pred CCEEEECcCccccChHHHHHHHHHHHCCCEEECc--ccCccCCCCCcCccCCcCCCcCCHHHHHHHHhCCEEEEECCCcc
Confidence 4566677777666677899999999999887664 24566654 335654 222 124799999996321
Q ss_pred hhhhhccC---CCcEEEEEcCCCCCCcccccceEEeecHHHHHHHHHhhcc
Q 018544 304 IQHLAGMR---DSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKFP 351 (354)
Q Consensus 304 ~QH~~G~~---~s~~IVAIN~D~~ApIf~~aDygiVgD~~~vlp~l~~~l~ 351 (354)
--.+.+.. ....+|-||.|+.- | .. .|-.--|+.+++.+|.+.++
T Consensus 308 ~~~~~~~~~~~~~~~~i~id~d~~~-~-~~-~~~~~~~~~~~l~~L~~~l~ 355 (570)
T 2vbf_A 308 DSSTGAFTHHLDENKMISLNIDEGI-I-FN-KVVEDFDFRAVVSSLSELKG 355 (570)
T ss_dssp GGGTTTTCCCCCGGGEEEECSSCEE-E-TT-EEECSSCHHHHHHTGGGCCS
T ss_pred cccccccccCCCCCeEEEEeCCHHH-h-CC-eeecCCCHHHHHHHHHHhcc
Confidence 11222221 22356778888741 1 11 12222368888888877664
No 69
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=51.13 E-value=77 Score=28.06 Aligned_cols=107 Identities=14% Similarity=0.032 Sum_probs=65.3
Q ss_pred cccceeEEEEEecCCccChHHHHHHHHHHhcCC--CCcEEEEEEcCCCC----HHHHHHHHhhcCCCccEEEEEeCCCCC
Q 018544 23 SRSISTLVLGEHENGSIKSQSLSAVEAAKSLSD--DNSVSMLLAGSGPS----FNEAVKHAASSHPSISQVLVADSDKFA 96 (354)
Q Consensus 23 ~~~~~IlV~~E~~~g~l~~~slell~~A~~La~--~~~V~avv~G~~~~----~~~~a~~l~~~~~GaD~V~~~~~~~l~ 96 (354)
+.+.+|+|..+..+ .+..++..|..|++ +.+++++-+-+... .+++.+.+. ..|.+--+.+..
T Consensus 5 ~~~~~ILv~~D~s~-----~s~~al~~A~~la~~~~a~l~ll~v~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~---- 73 (290)
T 3mt0_A 5 QAIRSILVVIEPDQ-----LEGLALKRAQLIAGVTQSHLHLLVCEKRRDHSAALNDLAQELR--EEGYSVSTNQAW---- 73 (290)
T ss_dssp TTCCEEEEECCSSC-----SCCHHHHHHHHHHHHHCCEEEEEEECSSSCCHHHHHHHHHHHH--HTTCCEEEEEEC----
T ss_pred hhhceEEEEeCCCc-----cchHHHHHHHHHHHhcCCeEEEEEeeCcHHHHHHHHHHHHHHh--hCCCeEEEEEEe----
Confidence 34456888886543 35666777777765 57888887753211 233444443 357663333321
Q ss_pred CCCHHHHHHHHHHHHHhcCccEEEeCCCCCc---c----chHHHHHHHcCCCce
Q 018544 97 YPIAEPWAKLVHMIQQREKYSHIISASGSFG---K----NVLPRAAALLDVSPI 143 (354)
Q Consensus 97 ~~~~e~~a~aLa~li~~~~P~lVL~g~T~~G---r----dlaprlAarL~~~lv 143 (354)
.. ..++.|.+.+++.++|+|++|....+ + ..+-++..+.++|++
T Consensus 74 ~g---~~~~~i~~~a~~~~~dliV~G~~~~~~~~~~~~gs~~~~vl~~~~~PVl 124 (290)
T 3mt0_A 74 KD---SLHQTIIAEQQAEGCGLIIKQHFPDNPLKKAILTPDDWKLLRFAPCPVL 124 (290)
T ss_dssp SS---SHHHHHHHHHHHHTCSEEEEECCCSCTTSTTSCCHHHHHHHHHCSSCEE
T ss_pred CC---CHHHHHHHHHHhcCCCEEEEecccCCchhhcccCHHHHHHHhcCCCCEE
Confidence 11 23467777888889999999986543 2 556677777777755
No 70
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=51.04 E-value=1.6e+02 Score=27.48 Aligned_cols=63 Identities=14% Similarity=0.140 Sum_probs=48.4
Q ss_pred HHHHHHhhcCCCccEEEEEeCCCCCCCCHHHHHHHHHHHHHhc-CccEEEeCCCCCccchHHHHHHHc
Q 018544 72 EAVKHAASSHPSISQVLVADSDKFAYPIAEPWAKLVHMIQQRE-KYSHIISASGSFGKNVLPRAAALL 138 (354)
Q Consensus 72 ~~a~~l~~~~~GaD~V~~~~~~~l~~~~~e~~a~aLa~li~~~-~P~lVL~g~T~~GrdlaprlAarL 138 (354)
+.++++. .+|+|.+.+.|.- ....|+.+.+.+..+.+.. +-.+=+=.+...|..+|--+|+..
T Consensus 173 ~~~~~~~--~~Ga~~i~l~DT~--G~~~P~~v~~lv~~l~~~~p~~~i~~H~Hnd~GlA~AN~laAv~ 236 (337)
T 3ble_A 173 SLVEHLS--KEHIERIFLPDTL--GVLSPEETFQGVDSLIQKYPDIHFEFHGHNDYDLSVANSLQAIR 236 (337)
T ss_dssp HHHHHHH--TSCCSEEEEECTT--CCCCHHHHHHHHHHHHHHCTTSCEEEECBCTTSCHHHHHHHHHH
T ss_pred HHHHHHH--HcCCCEEEEecCC--CCcCHHHHHHHHHHHHHhcCCCeEEEEecCCcchHHHHHHHHHH
Confidence 4566776 5899999998874 5568999999998888776 334555577889999998888765
No 71
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=50.47 E-value=85 Score=24.22 Aligned_cols=102 Identities=10% Similarity=0.076 Sum_probs=62.1
Q ss_pred ceeEEEEEecCCccChHHHHHHHHHHhcCC--CCcEEEEEEcCCCC------------------------HHHHHHHHhh
Q 018544 26 ISTLVLGEHENGSIKSQSLSAVEAAKSLSD--DNSVSMLLAGSGPS------------------------FNEAVKHAAS 79 (354)
Q Consensus 26 ~~IlV~~E~~~g~l~~~slell~~A~~La~--~~~V~avv~G~~~~------------------------~~~~a~~l~~ 79 (354)
.+|+|-.+. .+.+..++..|.+|++ +.+++++-+-+... .+.+.+.+.
T Consensus 6 ~~ILv~~D~-----s~~s~~al~~A~~la~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~- 79 (146)
T 3s3t_A 6 TNILVPVDS-----SDAAQAAFTEAVNIAQRHQANLTALYVVDDSAYHTPALDPVLSELLDAEAAHAKDAMRQRQQFVA- 79 (146)
T ss_dssp CEEEEECCS-----SHHHHHHHHHHHHHHHHHTCEEEEEEEEECCCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred ceEEEEcCC-----CHHHHHHHHHHHHHHHhcCCEEEEEEEecCccccccccccccHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 457777653 3578889999988876 67888876532100 111222332
Q ss_pred cCCCc-cEE-EEEeCCCCCCCCHHHHHHHHHH-HHHhcCccEEEeCCCCCc---c----chHHHHHHHcCCCce
Q 018544 80 SHPSI-SQV-LVADSDKFAYPIAEPWAKLVHM-IQQREKYSHIISASGSFG---K----NVLPRAAALLDVSPI 143 (354)
Q Consensus 80 ~~~Ga-D~V-~~~~~~~l~~~~~e~~a~aLa~-li~~~~P~lVL~g~T~~G---r----dlaprlAarL~~~lv 143 (354)
..|. +-- .+... ..++.|.+ .+++.++|+|++|....+ + .++-++.....+|++
T Consensus 80 -~~g~~~~~~~~~~g---------~~~~~I~~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~~pVl 143 (146)
T 3s3t_A 80 -TTSAPNLKTEISYG---------IPKHTIEDYAKQHPEIDLIVLGATGTNSPHRVAVGSTTSYVVDHAPCNVI 143 (146)
T ss_dssp -TSSCCCCEEEEEEE---------CHHHHHHHHHHHSTTCCEEEEESCCSSCTTTCSSCHHHHHHHHHCSSEEE
T ss_pred -hcCCcceEEEEecC---------ChHHHHHHHHHhhcCCCEEEECCCCCCCcceEEEcchHHHHhccCCCCEE
Confidence 3566 311 22221 13466777 888899999999975433 2 556677777777754
No 72
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=49.54 E-value=69 Score=24.67 Aligned_cols=41 Identities=10% Similarity=-0.050 Sum_probs=30.0
Q ss_pred HHHHHHHHHHhcCccEEEeCCCCCc------cchHHHHHHHcCCCce
Q 018544 103 WAKLVHMIQQREKYSHIISASGSFG------KNVLPRAAALLDVSPI 143 (354)
Q Consensus 103 ~a~aLa~li~~~~P~lVL~g~T~~G------rdlaprlAarL~~~lv 143 (354)
.++.|.+.+++.++|+|++|....+ ..++-++..+..+|++
T Consensus 94 ~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~Gs~~~~v~~~~~~pVl 140 (143)
T 3fdx_A 94 PKDKILALAKSLPADLVIIASHRPDITTYLLGSNAAAVVRHAECSVL 140 (143)
T ss_dssp HHHHHHHHHHHTTCSEEEEESSCTTCCSCSSCHHHHHHHHHCSSEEE
T ss_pred hHHHHHHHHHHhCCCEEEEeCCCCCCeeeeeccHHHHHHHhCCCCEE
Confidence 3567888899999999999986322 2456677777777754
No 73
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=49.04 E-value=13 Score=35.26 Aligned_cols=100 Identities=12% Similarity=0.047 Sum_probs=60.6
Q ss_pred ChHHHHHHHH---HHhcCCCCcEEEEEE--cCC----------C-CHHHHHHHHhhcCCCccEEEEEeC--CCCCCCCH-
Q 018544 40 KSQSLSAVEA---AKSLSDDNSVSMLLA--GSG----------P-SFNEAVKHAASSHPSISQVLVADS--DKFAYPIA- 100 (354)
Q Consensus 40 ~~~slell~~---A~~La~~~~V~avv~--G~~----------~-~~~~~a~~l~~~~~GaD~V~~~~~--~~l~~~~~- 100 (354)
++.-.|+|-. +++.+ ..++++|+. |.. + +.+-.++-+. ..|+|+|+.+|- ++.++|-.
T Consensus 64 nd~lmeLl~~idA~k~as-A~rIt~ViPY~~YaRQDr~~~~repisak~vA~lL~--~~G~drvit~DlH~~qiqgfF~i 140 (326)
T 3s5j_B 64 NDNLMELLIMINACKIAS-ASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLS--VAGADHIITMDLHASQIQGFFDI 140 (326)
T ss_dssp HHHHHHHHHHHHHHHHTT-CSEEEEEESSCTTTTCCSCTTSSCCCHHHHHHHHHH--HHTCSEEEEESCSSGGGGGGCSS
T ss_pred cHHHHHHHHHHHHHHhcC-CcEEEEeccCccccccCCcCCCCCCEeHHHHHHHHH--HcCCCEEEEEeCCChHHHhhcCC
Confidence 4555666544 33332 268888864 422 1 1233445454 479999999973 33333211
Q ss_pred ----HHHHHHHHHHHHhcC---ccEEEeCCCCCccchHHHHHHHcCCCc
Q 018544 101 ----EPWAKLVHMIQQREK---YSHIISASGSFGKNVLPRAAALLDVSP 142 (354)
Q Consensus 101 ----e~~a~aLa~li~~~~---P~lVL~g~T~~GrdlaprlAarL~~~l 142 (354)
..-...+++.+++.- .+.++++-..-|-..+..+|.+|+.|+
T Consensus 141 pvd~l~a~p~l~~~i~~~~~~~~~~vVVspd~Ggv~~A~~lA~~L~~~~ 189 (326)
T 3s5j_B 141 PVDNLYAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTSIADRLNVDF 189 (326)
T ss_dssp CEEEECSHHHHHHHHHHHCTTGGGCEEEESSGGGHHHHHHHHHHHTCEE
T ss_pred ceeceEcHHHHHHHHHHhcCcCCCcEEEEECCCchHHHHHHHHHcCCCE
Confidence 011355666665532 357888888888899999999999875
No 74
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=48.87 E-value=1.5e+02 Score=26.59 Aligned_cols=108 Identities=11% Similarity=0.022 Sum_probs=56.4
Q ss_pred ceeEEEEEecCCccChHHHHHHHHHHhcCC-CCcEEEEEEcCCCCHHHHHHHHhhcCCCccEEEEEeCCCCCCCC-----
Q 018544 26 ISTLVLGEHENGSIKSQSLSAVEAAKSLSD-DNSVSMLLAGSGPSFNEAVKHAASSHPSISQVLVADSDKFAYPI----- 99 (354)
Q Consensus 26 ~~IlV~~E~~~g~l~~~slell~~A~~La~-~~~V~avv~G~~~~~~~~a~~l~~~~~GaD~V~~~~~~~l~~~~----- 99 (354)
|+|+++.-..+ -...-++..|+.|.+ +.+|+.+..... .. .+.+. ..|.. ++.+..+.+....
T Consensus 7 mkIl~~~~~~g----G~~~~~~~la~~L~~~G~~V~v~~~~~~--~~--~~~~~--~~g~~-~~~~~~~~~~~~~~~~~~ 75 (364)
T 1f0k_A 7 KRLMVMAGGTG----GHVFPGLAVAHHLMAQGWQVRWLGTADR--ME--ADLVP--KHGIE-IDFIRISGLRGKGIKALI 75 (364)
T ss_dssp CEEEEECCSSH----HHHHHHHHHHHHHHTTTCEEEEEECTTS--TH--HHHGG--GGTCE-EEECCCCCCTTCCHHHHH
T ss_pred cEEEEEeCCCc----cchhHHHHHHHHHHHcCCEEEEEecCCc--ch--hhhcc--ccCCc-eEEecCCccCcCccHHHH
Confidence 88998862221 222333455666654 567776655433 12 12222 24664 4444443332211
Q ss_pred --HH---HHHHHHHHHHHhcCccEEEeCCCCCccchHHHHHHHcCCCceee
Q 018544 100 --AE---PWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITD 145 (354)
Q Consensus 100 --~e---~~a~aLa~li~~~~P~lVL~g~T~~GrdlaprlAarL~~~lvtd 145 (354)
.. .....+.+++++.+||+|++-..... -.+..++..++.|++..
T Consensus 76 ~~~~~~~~~~~~l~~~l~~~~pDvv~~~~~~~~-~~~~~~~~~~~~p~v~~ 125 (364)
T 1f0k_A 76 AAPLRIFNAWRQARAIMKAYKPDVVLGMGGYVS-GPGGLAAWSLGIPVVLH 125 (364)
T ss_dssp TCHHHHHHHHHHHHHHHHHHCCSEEEECSSTTH-HHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcCc-hHHHHHHHHcCCCEEEE
Confidence 11 12345667788889999998543221 23445566778888743
No 75
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=48.02 E-value=1.5e+02 Score=26.94 Aligned_cols=64 Identities=11% Similarity=0.111 Sum_probs=47.8
Q ss_pred HHHHHHHhhcCCCccEEEEEeCCCCCCCCHHHHHHHHHHHHHhcC-ccEEEeCCCCCccchHHHHHHHc
Q 018544 71 NEAVKHAASSHPSISQVLVADSDKFAYPIAEPWAKLVHMIQQREK-YSHIISASGSFGKNVLPRAAALL 138 (354)
Q Consensus 71 ~~~a~~l~~~~~GaD~V~~~~~~~l~~~~~e~~a~aLa~li~~~~-P~lVL~g~T~~GrdlaprlAarL 138 (354)
.+.++.+. .+|+|.+.+.|.- ....|+.+.+.+..+.+... -.+=+=.+...|..++--+++..
T Consensus 159 ~~~~~~~~--~~Ga~~i~l~DT~--G~~~P~~~~~lv~~l~~~~~~~~i~~H~Hn~~Gla~An~laA~~ 223 (298)
T 2cw6_A 159 AEVTKKFY--SMGCYEISLGDTI--GVGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQ 223 (298)
T ss_dssp HHHHHHHH--HTTCSEEEEEETT--SCCCHHHHHHHHHHHHHHSCGGGEEEEEBCTTSCHHHHHHHHHH
T ss_pred HHHHHHHH--HcCCCEEEecCCC--CCcCHHHHHHHHHHHHHhCCCCeEEEEECCCCchHHHHHHHHHH
Confidence 34556666 4899999998774 56789999999998887762 24666677889998888777653
No 76
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=46.35 E-value=1.5e+02 Score=26.04 Aligned_cols=106 Identities=18% Similarity=0.191 Sum_probs=59.7
Q ss_pred ccccccccceeEEEEEecCCccChHHHHHHHHHHhcCC-CCcEEEEEEcCCCCHHHHHHHHhhcCCCccEEEEEeCCCCC
Q 018544 18 HRPSISRSISTLVLGEHENGSIKSQSLSAVEAAKSLSD-DNSVSMLLAGSGPSFNEAVKHAASSHPSISQVLVADSDKFA 96 (354)
Q Consensus 18 ~~~~~~~~~~IlV~~E~~~g~l~~~slell~~A~~La~-~~~V~avv~G~~~~~~~~a~~l~~~~~GaD~V~~~~~~~l~ 96 (354)
.+++.++.|+|.|++=-.+ ..++.|-.+.+ .+ +.+|.+|+--++ . ...+.+. .+|.. ++..+...+
T Consensus 5 ~~~~~~~~~ri~vl~SG~g-----snl~all~~~~-~~~~~eI~~Vis~~~--a-~~~~~A~--~~gIp-~~~~~~~~~- 71 (215)
T 3da8_A 5 LRVPPSAPARLVVLASGTG-----SLLRSLLDAAV-GDYPARVVAVGVDRE--C-RAAEIAA--EASVP-VFTVRLADH- 71 (215)
T ss_dssp EEECCCSSEEEEEEESSCC-----HHHHHHHHHSS-TTCSEEEEEEEESSC--C-HHHHHHH--HTTCC-EEECCGGGS-
T ss_pred ccCCCCCCcEEEEEEeCCh-----HHHHHHHHHHh-ccCCCeEEEEEeCCc--h-HHHHHHH--HcCCC-EEEeCcccc-
Confidence 3455577788888875432 45555444432 11 247766655443 2 2222222 37887 555443212
Q ss_pred CCCHHHHHHHHHHHHHhcCccEEEeCCCCCccchHHHHHHHcC
Q 018544 97 YPIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLD 139 (354)
Q Consensus 97 ~~~~e~~a~aLa~li~~~~P~lVL~g~T~~GrdlaprlAarL~ 139 (354)
.+-+.|-+.+.+.+++.+||+|++.+ +++-|.+.+=.+..
T Consensus 72 -~~r~~~d~~~~~~l~~~~~Dlivlag--y~~iL~~~~l~~~~ 111 (215)
T 3da8_A 72 -PSRDAWDVAITAATAAHEPDLVVSAG--FMRILGPQFLSRFY 111 (215)
T ss_dssp -SSHHHHHHHHHHHHHTTCCSEEEEEE--CCSCCCHHHHHHHT
T ss_pred -cchhhhhHHHHHHHHhhCCCEEEEcC--chhhCCHHHHhhcc
Confidence 23466677888899999999999755 44545444444443
No 77
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=46.06 E-value=72 Score=29.88 Aligned_cols=107 Identities=15% Similarity=0.084 Sum_probs=57.8
Q ss_pred ccceeEEEEEecCCccChHHHHHHHHHHhcCC-CCcEEEEEEcCCCCHHHHHHHHhhcCCCccEEEEEeCC--CCC-C--
Q 018544 24 RSISTLVLGEHENGSIKSQSLSAVEAAKSLSD-DNSVSMLLAGSGPSFNEAVKHAASSHPSISQVLVADSD--KFA-Y-- 97 (354)
Q Consensus 24 ~~~~IlV~~E~~~g~l~~~slell~~A~~La~-~~~V~avv~G~~~~~~~~a~~l~~~~~GaD~V~~~~~~--~l~-~-- 97 (354)
.+|.|+++.-...|.+ .-++..|++|.+ |.+|+.+.-.. ..+..+. .|.+ .+-+.+. ... .
T Consensus 11 ~~~~Il~~~~~~~GHv----~p~l~la~~L~~~Gh~V~~~~~~~---~~~~~~~-----~g~~-~~~~~~~~~~~~~~~~ 77 (424)
T 2iya_A 11 TPRHISFFNIPGHGHV----NPSLGIVQELVARGHRVSYAITDE---FAAQVKA-----AGAT-PVVYDSILPKESNPEE 77 (424)
T ss_dssp CCCEEEEECCSCHHHH----HHHHHHHHHHHHTTCEEEEEECGG---GHHHHHH-----HTCE-EEECCCCSCCTTCTTC
T ss_pred ccceEEEEeCCCCccc----chHHHHHHHHHHCCCeEEEEeCHH---HHHHHHh-----CCCE-EEecCccccccccchh
Confidence 3578888754444444 334556777754 56776554322 2222221 3654 3333321 110 0
Q ss_pred --C-CH-----------HHHHHHHHHHHHhcCccEEEeCCCCCccchHHHHHHHcCCCceeee
Q 018544 98 --P-IA-----------EPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDV 146 (354)
Q Consensus 98 --~-~~-----------e~~a~aLa~li~~~~P~lVL~g~T~~GrdlaprlAarL~~~lvtdv 146 (354)
. +. ....+.+.+++++.+||+|+.-... -.+..+|.++|+|.+.-.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~VI~d~~~---~~~~~~A~~lgIP~v~~~ 137 (424)
T 2iya_A 78 SWPEDQESAMGLFLDEAVRVLPQLEDAYADDRPDLIVYDIAS---WPAPVLGRKWDIPFVQLS 137 (424)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHHHHTTTSCCSEEEEETTC---THHHHHHHHHTCCEEEEE
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEcCcc---cHHHHHHHhcCCCEEEEe
Confidence 0 10 1223345566667789999975532 257788899999988644
No 78
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=44.56 E-value=1.9e+02 Score=26.48 Aligned_cols=103 Identities=10% Similarity=0.048 Sum_probs=62.6
Q ss_pred ccccceeEEEEEecCCccChHHHHHHHHHHhcCC-CCcEEEEEEcCCCCHHHHHHHHhhcCCCccEEEEEeCCCCCCCCH
Q 018544 22 ISRSISTLVLGEHENGSIKSQSLSAVEAAKSLSD-DNSVSMLLAGSGPSFNEAVKHAASSHPSISQVLVADSDKFAYPIA 100 (354)
Q Consensus 22 ~~~~~~IlV~~E~~~g~l~~~slell~~A~~La~-~~~V~avv~G~~~~~~~~a~~l~~~~~GaD~V~~~~~~~l~~~~~ 100 (354)
.++.++|.|++=.. | ..++.|=.+.+-++ +.++.+|+-...+ ...+++ .+|.. +++++.. ..+-
T Consensus 87 ~~~~~ri~vl~Sg~-g----~~l~~ll~~~~~g~l~~~i~~Visn~~~-~~~~A~-----~~gIp-~~~~~~~---~~~r 151 (286)
T 3n0v_A 87 PNHRPKVVIMVSKA-D----HCLNDLLYRQRIGQLGMDVVAVVSNHPD-LEPLAH-----WHKIP-YYHFALD---PKDK 151 (286)
T ss_dssp TTCCCEEEEEESSC-C----HHHHHHHHHHHTTSSCCEEEEEEESSST-THHHHH-----HTTCC-EEECCCB---TTBH
T ss_pred CCCCcEEEEEEeCC-C----CCHHHHHHHHHCCCCCcEEEEEEeCcHH-HHHHHH-----HcCCC-EEEeCCC---cCCH
Confidence 34567888887543 2 56666655544343 3678776665432 444433 36877 4444331 1233
Q ss_pred HHHHHHHHHHHHhcCccEEEeCCCCCccchHHHHHHHcCCC
Q 018544 101 EPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVS 141 (354)
Q Consensus 101 e~~a~aLa~li~~~~P~lVL~g~T~~GrdlaprlAarL~~~ 141 (354)
+.+-..+.+.+++.+||+|++.. +++-|.+.+-.+...+
T Consensus 152 ~~~~~~~~~~l~~~~~Dlivla~--y~~il~~~~l~~~~~~ 190 (286)
T 3n0v_A 152 PGQERKVLQVIEETGAELVILAR--YMQVLSPELCRRLDGW 190 (286)
T ss_dssp HHHHHHHHHHHHHHTCSEEEESS--CCSCCCHHHHHHTTTS
T ss_pred HHHHHHHHHHHHhcCCCEEEecc--cccccCHHHHhhhcCC
Confidence 55666788889999999999875 5666666666665544
No 79
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=44.55 E-value=83 Score=29.36 Aligned_cols=39 Identities=5% Similarity=-0.117 Sum_probs=27.8
Q ss_pred HHHHHHHHhcCccEEEeCCCCCccchHHHHHHHcCCCceeee
Q 018544 105 KLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDV 146 (354)
Q Consensus 105 ~aLa~li~~~~P~lVL~g~T~~GrdlaprlAarL~~~lvtdv 146 (354)
..+.+++++.+||+|+.-.. + -.+..+|.++++|++.-.
T Consensus 94 ~~l~~~l~~~~pD~Vi~d~~--~-~~~~~~A~~~giP~v~~~ 132 (430)
T 2iyf_A 94 PQLADAYADDIPDLVLHDIT--S-YPARVLARRWGVPAVSLS 132 (430)
T ss_dssp HHHHHHHTTSCCSEEEEETT--C-HHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHhhccCCCEEEECCc--c-HHHHHHHHHcCCCEEEEe
Confidence 44666777789999996432 1 266778888999987654
No 80
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=44.00 E-value=2e+02 Score=26.60 Aligned_cols=100 Identities=11% Similarity=0.137 Sum_probs=58.7
Q ss_pred cccceeEEEEEecCCccChHHHHHHHHHHhcCC-CCcEEEEEEcCCCCHHHHHHHHhhcCCCccEEEEEeCCCCCCCCHH
Q 018544 23 SRSISTLVLGEHENGSIKSQSLSAVEAAKSLSD-DNSVSMLLAGSGPSFNEAVKHAASSHPSISQVLVADSDKFAYPIAE 101 (354)
Q Consensus 23 ~~~~~IlV~~E~~~g~l~~~slell~~A~~La~-~~~V~avv~G~~~~~~~~a~~l~~~~~GaD~V~~~~~~~l~~~~~e 101 (354)
++.++|.|++=.. | ..|+.|=.+.+-++ +.+|.+|+-...+ +...+ ..+|.. +++++... .+-+
T Consensus 103 ~~~~ri~vl~Sg~-g----~nl~~ll~~~~~g~l~~~I~~Visn~~~-~~~~A-----~~~gIp-~~~~~~~~---~~r~ 167 (302)
T 3o1l_A 103 AQKKRVVLMASRE-S----HCLADLLHRWHSDELDCDIACVISNHQD-LRSMV-----EWHDIP-YYHVPVDP---KDKE 167 (302)
T ss_dssp TSCCEEEEEECSC-C----HHHHHHHHHHHTTCSCSEEEEEEESSST-THHHH-----HTTTCC-EEECCCCS---SCCH
T ss_pred CCCcEEEEEEeCC-c----hhHHHHHHHHHCCCCCcEEEEEEECcHH-HHHHH-----HHcCCC-EEEcCCCc---CCHH
Confidence 4567888888543 2 46666655554443 3678776664432 33333 247887 45543221 2334
Q ss_pred HHHHHHHHHHHhcCccEEEeCCCCCccchHHHHHHHcC
Q 018544 102 PWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLD 139 (354)
Q Consensus 102 ~~a~aLa~li~~~~P~lVL~g~T~~GrdlaprlAarL~ 139 (354)
.+-..+.+.+++.+||+|++.. +++-|.+.+-.+..
T Consensus 168 ~~~~~~~~~l~~~~~DliVlag--ym~IL~~~~l~~~~ 203 (302)
T 3o1l_A 168 PAFAEVSRLVGHHQADVVVLAR--YMQILPPQLCREYA 203 (302)
T ss_dssp HHHHHHHHHHHHTTCSEEEESS--CCSCCCTTHHHHTT
T ss_pred HHHHHHHHHHHHhCCCEEEHhH--hhhhcCHHHHhhhh
Confidence 5666788889999999999865 44444444444443
No 81
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=43.25 E-value=89 Score=27.65 Aligned_cols=126 Identities=14% Similarity=0.166 Sum_probs=67.4
Q ss_pred HHHhcCCCccc---c-ccccccceeEEEEEecCCc--cChHHHHHHHHHHhcCC--CCcEEEEEEcCCCC----------
Q 018544 8 WALSKRPRCFH---R-PSISRSISTLVLGEHENGS--IKSQSLSAVEAAKSLSD--DNSVSMLLAGSGPS---------- 69 (354)
Q Consensus 8 ~~~~~~~~~~~---~-~~~~~~~~IlV~~E~~~g~--l~~~slell~~A~~La~--~~~V~avv~G~~~~---------- 69 (354)
++++++..||. + ..-....+|+|-.+..+.. -...+..++..|.+|++ +.+++++-+-+...
T Consensus 113 ~~vl~~~~~PVlvv~~~~~~~~~~Ilva~D~s~~~~~~~~~s~~al~~a~~la~~~~a~l~ll~v~~~~~~~~~~~~~~~ 192 (290)
T 3mt0_A 113 WKLLRFAPCPVLMTKTARPWTGGKILAAVDVGNNDGEHRSLHAGIISHAYDIAGLAKATLHVISAHPSPMLSSADPTFQL 192 (290)
T ss_dssp HHHHHHCSSCEEEECCCSCSTTCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEC---------CHHH
T ss_pred HHHHhcCCCCEEEecCCCCCCCCeEEEEECCCCcchhhhHHHHHHHHHHHHHHHHcCCeEEEEEEecCccccccCchhHH
Confidence 45555556653 2 1111456788877654321 00127778888888765 57888876533210
Q ss_pred -------HHHHHHHHhhcCCCcc--EEEEEeCCCCCCCCHHHHHHHHHHHHHhcCccEEEeCCCCCcc-------chHHH
Q 018544 70 -------FNEAVKHAASSHPSIS--QVLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGK-------NVLPR 133 (354)
Q Consensus 70 -------~~~~a~~l~~~~~GaD--~V~~~~~~~l~~~~~e~~a~aLa~li~~~~P~lVL~g~T~~Gr-------dlapr 133 (354)
.++..+++. ..+|.+ +..+..+ ..++.|.+.+++.++|+|++|....+. .++-+
T Consensus 193 ~~~~~~~~~~~l~~~~-~~~g~~~~~~~v~~g---------~~~~~I~~~a~~~~~dLiVmG~~g~~~~~~~~~Gsv~~~ 262 (290)
T 3mt0_A 193 SETIEARYREACRTFQ-AEYGFSDEQLHIEEG---------PADVLIPRTAQKLDAVVTVIGTVARTGLSGALIGNTAEV 262 (290)
T ss_dssp HHHHHHHHHHHHHHHH-HHHTCCTTTEEEEES---------CHHHHHHHHHHHHTCSEEEEECCSSCCGGGCCSCHHHHH
T ss_pred HHHHHHHHHHHHHHHH-HHcCCCcceEEEecc---------CHHHHHHHHHHhcCCCEEEECCCCCcCCcceecchHHHH
Confidence 011122222 124653 2222222 235678888889999999999864432 34445
Q ss_pred HHHHcCCCce
Q 018544 134 AAALLDVSPI 143 (354)
Q Consensus 134 lAarL~~~lv 143 (354)
+..+..+|++
T Consensus 263 vl~~~~~pVL 272 (290)
T 3mt0_A 263 VLDTLESDVL 272 (290)
T ss_dssp HHTTCSSEEE
T ss_pred HHhcCCCCEE
Confidence 5555555543
No 82
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=42.73 E-value=2e+02 Score=26.35 Aligned_cols=102 Identities=9% Similarity=0.030 Sum_probs=60.9
Q ss_pred cccceeEEEEEecCCccChHHHHHHHHHHhcCC-CCcEEEEEEcCCCCHHHHHHHHhhcCCCccEEEEEeCCCCCCCCHH
Q 018544 23 SRSISTLVLGEHENGSIKSQSLSAVEAAKSLSD-DNSVSMLLAGSGPSFNEAVKHAASSHPSISQVLVADSDKFAYPIAE 101 (354)
Q Consensus 23 ~~~~~IlV~~E~~~g~l~~~slell~~A~~La~-~~~V~avv~G~~~~~~~~a~~l~~~~~GaD~V~~~~~~~l~~~~~e 101 (354)
++.++|.|++=.. | ..++.|=.+.+-++ ..++.+|+-...+ ...+++ .+|.. ++++... ..+-+
T Consensus 93 ~~~~ri~vl~Sg~-g----~~l~~ll~~~~~g~l~~~i~~Visn~~~-~~~~A~-----~~gIp-~~~~~~~---~~~r~ 157 (292)
T 3lou_A 93 AARPKVLIMVSKL-E----HCLADLLFRWKMGELKMDIVGIVSNHPD-FAPLAA-----QHGLP-FRHFPIT---ADTKA 157 (292)
T ss_dssp TSCCEEEEEECSC-C----HHHHHHHHHHHHTSSCCEEEEEEESSST-THHHHH-----HTTCC-EEECCCC---SSCHH
T ss_pred CCCCEEEEEEcCC-C----cCHHHHHHHHHcCCCCcEEEEEEeCcHH-HHHHHH-----HcCCC-EEEeCCC---cCCHH
Confidence 4567888888543 2 46666555544333 3678776664432 344432 36887 4444332 12345
Q ss_pred HHHHHHHHHHHhcCccEEEeCCCCCccchHHHHHHHcCCC
Q 018544 102 PWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVS 141 (354)
Q Consensus 102 ~~a~aLa~li~~~~P~lVL~g~T~~GrdlaprlAarL~~~ 141 (354)
.+-..+.+.+++.+||+|++.. +++-|.+.+=.+...+
T Consensus 158 ~~~~~~~~~l~~~~~Dlivla~--y~~il~~~~l~~~~~~ 195 (292)
T 3lou_A 158 QQEAQWLDVFETSGAELVILAR--YMQVLSPEASARLANR 195 (292)
T ss_dssp HHHHHHHHHHHHHTCSEEEESS--CCSCCCHHHHHHTTTS
T ss_pred HHHHHHHHHHHHhCCCEEEecC--chhhCCHHHHhhhcCC
Confidence 5666788889999999999764 4555656665555443
No 83
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=42.03 E-value=47 Score=29.64 Aligned_cols=35 Identities=23% Similarity=0.283 Sum_probs=25.5
Q ss_pred EEEEEEcCCCCHHHHHHHHhhcCCCccEEEEEeCCCC
Q 018544 59 VSMLLAGSGPSFNEAVKHAASSHPSISQVLVADSDKF 95 (354)
Q Consensus 59 V~avv~G~~~~~~~~a~~l~~~~~GaD~V~~~~~~~l 95 (354)
-.++++|.+..-..+++.|+ ..|+.++.++|.+..
T Consensus 29 ~~VlvvG~GglG~~va~~La--~~Gvg~i~lvD~d~v 63 (251)
T 1zud_1 29 SQVLIIGLGGLGTPAALYLA--GAGVGTLVLADDDDV 63 (251)
T ss_dssp CEEEEECCSTTHHHHHHHHH--HTTCSEEEEECCCBC
T ss_pred CcEEEEccCHHHHHHHHHHH--HcCCCeEEEEeCCCc
Confidence 35667776643466788887 589999999987653
No 84
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=42.02 E-value=51 Score=31.20 Aligned_cols=113 Identities=10% Similarity=-0.027 Sum_probs=54.8
Q ss_pred ccceeEEEEEecCCccChHHHHHHHHHHhcCCCCcEEEEEEcCCCCHHHHHHHHhhcCCCccEEEEEeCCCCCCCCHHHH
Q 018544 24 RSISTLVLGEHENGSIKSQSLSAVEAAKSLSDDNSVSMLLAGSGPSFNEAVKHAASSHPSISQVLVADSDKFAYPIAEPW 103 (354)
Q Consensus 24 ~~~~IlV~~E~~~g~l~~~slell~~A~~La~~~~V~avv~G~~~~~~~~a~~l~~~~~GaD~V~~~~~~~l~~~~~e~~ 103 (354)
++|+|+++.-++.+-+.= ..++.+-++-. +-++.+++-|.. .+ ..++.. ..+|.+.-|.++--..........
T Consensus 24 ~m~ki~~v~Gtr~~~~~~--a~li~~l~~~~-~~~~~~~~tG~h--~~-~~~~~~-~~~~i~~~~~l~~~~~~~~~~~~~ 96 (396)
T 3dzc_A 24 AMKKVLIVFGTRPEAIKM--APLVQQLCQDN-RFVAKVCVTGQH--RE-MLDQVL-ELFSITPDFDLNIMEPGQTLNGVT 96 (396)
T ss_dssp CCEEEEEEECSHHHHHHH--HHHHHHHHHCT-TEEEEEEECCSS--SH-HHHHHH-HHTTCCCSEECCCCCTTCCHHHHH
T ss_pred CCCeEEEEEeccHhHHHH--HHHHHHHHhCC-CCcEEEEEeccc--HH-HHHHHH-HhcCCCCceeeecCCCCCCHHHHH
Confidence 357899999776543211 22232222211 234555666766 22 222222 135653222322111112223333
Q ss_pred HH---HHHHHHHhcCccEEEeCCCCCccchHHHHHHHcCCCce
Q 018544 104 AK---LVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPI 143 (354)
Q Consensus 104 a~---aLa~li~~~~P~lVL~g~T~~GrdlaprlAarL~~~lv 143 (354)
+. -+.+++++.+||+|++-.+...--.+...|.++++|++
T Consensus 97 ~~~~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~ 139 (396)
T 3dzc_A 97 SKILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPVG 139 (396)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTTTCCEE
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCchhHHHHHHHHHHhCCCEE
Confidence 33 45566788899999874433221222466678899965
No 85
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=41.00 E-value=28 Score=30.35 Aligned_cols=94 Identities=20% Similarity=0.313 Sum_probs=59.0
Q ss_pred CCcEEEEeCccCCChhcHHHHHHHHHHhCCeecccHhhHhcCCCCCCceeccCCceeCCceEEEecccchhhhhhcc---
Q 018544 234 SARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGM--- 310 (354)
Q Consensus 234 ~A~iVV~~GrG~~~~e~~~~~~~LA~~lga~vG~SRp~vd~gw~p~~~qIGqtG~~V~P~lYia~GISGa~QH~~G~--- 310 (354)
.|+.|+-.|.|-. ....++++..|. .+|- ++.-. -+.+.|.+.....=.-++.|++--||-...+.-+
T Consensus 58 ~a~~I~i~G~G~S----~~~A~~~~~~l~-~lg~--~~~~~--~~~~~~~~~~~~~~~~DlvI~iS~SG~t~~~i~~~~~ 128 (220)
T 3etn_A 58 KKGKLVTSGMGKA----GQIAMNIATTFC-STGI--PSVFL--HPSEAQHGDLGILQENDLLLLISNSGKTREIVELTQL 128 (220)
T ss_dssp TCCCEEEECSHHH----HHHHHHHHHHHH-HTTC--CEEEC--CTTGGGBTGGGGCCTTCEEEEECSSSCCHHHHHHHHH
T ss_pred cCCEEEEEEecHH----HHHHHHHHHHHH-hcCC--cEEEe--CCHHHHHhhhccCCCCCEEEEEcCCCCCHHHHHHHHH
Confidence 3899999999954 334556665554 1221 21100 1223344433333334799999999987654321
Q ss_pred -----CCCcEEEEEcCCCCCCcccccceEEee
Q 018544 311 -----RDSKVIVAVNKDADAPIFQVADYGLVG 337 (354)
Q Consensus 311 -----~~s~~IVAIN~D~~ApIf~~aDygiVg 337 (354)
++++ ||+|=.+++.|+.+.|||-+.-
T Consensus 129 ak~~~~Ga~-vI~IT~~~~s~La~~aD~~l~~ 159 (220)
T 3etn_A 129 AHNLNPGLK-FIVITGNPDSPLASESDVCLST 159 (220)
T ss_dssp HHHHCTTCE-EEEEESCTTSHHHHHSSEEEEC
T ss_pred HHhcCCCCe-EEEEECCCCChhHHhCCEEEEc
Confidence 4555 6788888999999999998865
No 86
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=40.84 E-value=31 Score=26.01 Aligned_cols=38 Identities=26% Similarity=0.356 Sum_probs=32.7
Q ss_pred CCceeCCceEEEecccchhhhhhccCCCcEEEEEcCCC
Q 018544 286 TGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDA 323 (354)
Q Consensus 286 tG~~V~P~lYia~GISGa~QH~~G~~~s~~IVAIN~D~ 323 (354)
.|....|-+||.-=..|++-+.+|++.-|.|++||.-+
T Consensus 37 ~~~~~~p~~~V~~v~~~spA~~aGl~~GD~I~~ing~~ 74 (107)
T 3qe1_A 37 NGELYAPLQHVSAVLPGGAADRAGVRKGDRILEVNGVN 74 (107)
T ss_dssp SSSEESCCEEEEEECTTSHHHHHTCCTTCEEEEETTEE
T ss_pred cccccCCceEEEEECCCCHHHHcCCCCCCEEEEECCEE
Confidence 36666888889888899999999999999999999743
No 87
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=39.90 E-value=16 Score=34.41 Aligned_cols=100 Identities=9% Similarity=0.038 Sum_probs=62.2
Q ss_pred ChHHHHHHHH---HHhcCCCCcEEEEEE--cCC-----------C-CHHHHHHHHhhcCCCccEEEEEeC--CCCCCCCH
Q 018544 40 KSQSLSAVEA---AKSLSDDNSVSMLLA--GSG-----------P-SFNEAVKHAASSHPSISQVLVADS--DKFAYPIA 100 (354)
Q Consensus 40 ~~~slell~~---A~~La~~~~V~avv~--G~~-----------~-~~~~~a~~l~~~~~GaD~V~~~~~--~~l~~~~~ 100 (354)
++.-.|+|-. +++.+ ..++++|+. |.. + +.+-.++-+. ..|+|+|+.+|- ++.++|-.
T Consensus 68 nd~lmeLl~~idA~k~as-A~rIt~ViPY~~YaRQDr~~~~~r~pisak~vA~ll~--~~G~d~vit~DlH~~qiqgfF~ 144 (319)
T 3dah_A 68 NDNLMELMIMVDALKRAS-AGRITAAIPYFGYARQDRRPRSARVAISAKVVANMLE--IAGVERIITMDLHADQIQGFFD 144 (319)
T ss_dssp HHHHHHHHHHHHHHHHTT-BSEEEEEESSCTTTTCCSCCTTCCCCCHHHHHHHHHH--HHTCCEEEEESCSCGGGGGGCS
T ss_pred cHHHHHHHHHHHHHHHcC-CcEEEEEccCccccccccccCCCCCCccHHHHHHHHH--hcCCCEEEEEECCChHHhhhcC
Confidence 4455666544 33432 257888864 421 1 1123444443 479999999973 33343321
Q ss_pred -----HHHHHHHHHHHHhcC-ccEEEeCCCCCccchHHHHHHHcCCCc
Q 018544 101 -----EPWAKLVHMIQQREK-YSHIISASGSFGKNVLPRAAALLDVSP 142 (354)
Q Consensus 101 -----e~~a~aLa~li~~~~-P~lVL~g~T~~GrdlaprlAarL~~~l 142 (354)
......+++.+++.. .+.++++-..-|-..+..+|.+|+.|+
T Consensus 145 ipvd~l~a~p~l~~~i~~~~~~~~vVVspd~Ggv~~A~~lA~~L~~p~ 192 (319)
T 3dah_A 145 IPVDNIYATPILLGDLRKQNYPDLLVVSPDVGGVVRARALAKQLNCDL 192 (319)
T ss_dssp SCEEEECCHHHHHHHHHTTCCTTEEEECCSSTTHHHHHHHHHHTTCEE
T ss_pred CceEecccHHHHHHHHHHhCCCCcEEEEeCCCccHHHHHHHHHhCCCE
Confidence 112466777777642 468888888889999999999999875
No 88
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=39.67 E-value=29 Score=28.48 Aligned_cols=40 Identities=13% Similarity=0.134 Sum_probs=32.5
Q ss_pred HHHHHHHHHhcCccEEEeC-----CCCCc------cchHHHHHHHcCCCce
Q 018544 104 AKLVHMIQQREKYSHIISA-----SGSFG------KNVLPRAAALLDVSPI 143 (354)
Q Consensus 104 a~aLa~li~~~~P~lVL~g-----~T~~G------rdlaprlAarL~~~lv 143 (354)
.+.|.+++++++|+.|++| +.+.| +..+-+|..+++.|+.
T Consensus 42 ~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~~lpV~ 92 (138)
T 1nu0_A 42 WNIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVK 92 (138)
T ss_dssp HHHHHHHHHHHCCSEEEEEEEECTTSCBCHHHHHHHHHHHHHHHHHCCCEE
T ss_pred HHHHHHHHHHcCCCEEEEecccCCCcCcCHHHHHHHHHHHHHHHHhCCCEE
Confidence 4678899999999999998 55566 7889999988876644
No 89
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=39.54 E-value=1.3e+02 Score=26.43 Aligned_cols=102 Identities=13% Similarity=0.095 Sum_probs=53.4
Q ss_pred cccccceeEEEEEecCCccChHHHHHHHHHHhcCC-CCcEEEEEEcCCCCHHHHHHHHhhcCCCccEEEEEeCCCCCCCC
Q 018544 21 SISRSISTLVLGEHENGSIKSQSLSAVEAAKSLSD-DNSVSMLLAGSGPSFNEAVKHAASSHPSISQVLVADSDKFAYPI 99 (354)
Q Consensus 21 ~~~~~~~IlV~~E~~~g~l~~~slell~~A~~La~-~~~V~avv~G~~~~~~~~a~~l~~~~~GaD~V~~~~~~~l~~~~ 99 (354)
+.++.++|.|++=-.+ ..++.+-.+.+-++ +.+|.+|+--..+ .... +.+. .+|.. +++++...+ .
T Consensus 4 ~~~~~~ri~vl~SG~g-----snl~all~~~~~~~~~~~I~~Vis~~~~-a~~l-~~A~--~~gIp-~~~~~~~~~---~ 70 (215)
T 3kcq_A 4 SMKKELRVGVLISGRG-----SNLEALAKAFSTEESSVVISCVISNNAE-ARGL-LIAQ--SYGIP-TFVVKRKPL---D 70 (215)
T ss_dssp ---CCEEEEEEESSCC-----HHHHHHHHHTCCC-CSEEEEEEEESCTT-CTHH-HHHH--HTTCC-EEECCBTTB---C
T ss_pred CCCCCCEEEEEEECCc-----HHHHHHHHHHHcCCCCcEEEEEEeCCcc-hHHH-HHHH--HcCCC-EEEeCcccC---C
Confidence 3455667877774332 34544444432221 2467776664321 2221 2222 37887 555544323 2
Q ss_pred HHHHHHHHHHHHHhcCccEEEeCCCCCccchHHHHHHHcCCC
Q 018544 100 AEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVS 141 (354)
Q Consensus 100 ~e~~a~aLa~li~~~~P~lVL~g~T~~GrdlaprlAarL~~~ 141 (354)
. +.+.+.+++.+||+|++.+ +++-+.+.+=.+...+
T Consensus 71 ~----~~~~~~L~~~~~Dlivlag--y~~IL~~~~l~~~~~~ 106 (215)
T 3kcq_A 71 I----EHISTVLREHDVDLVCLAG--FMSILPEKFVTDWHHK 106 (215)
T ss_dssp H----HHHHHHHHHTTCSEEEESS--CCSCCCHHHHHHTTTS
T ss_pred h----HHHHHHHHHhCCCEEEEeC--CceEeCHHHHhhccCC
Confidence 2 4566778889999999875 4566666555555433
No 90
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
Probab=38.16 E-value=17 Score=36.31 Aligned_cols=109 Identities=14% Similarity=0.088 Sum_probs=65.3
Q ss_pred cEEEEeCccCCChhcHHHHHHHHHHhCCeecccHhhHhcCCCCCC--ceeccC-Cc---------eeCCceEEEecccch
Q 018544 236 RIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPND--LQVGQT-GK---------IVAPELYMAFGVSGA 303 (354)
Q Consensus 236 ~iVV~~GrG~~~~e~~~~~~~LA~~lga~vG~SRp~vd~gw~p~~--~qIGqt-G~---------~V~P~lYia~GISGa 303 (354)
+-+|-+|.|+...+..+.+.+||+++|.-|-+|-- -.|.+|.+ ..+|.. |. .=.+++-|.+|-.=.
T Consensus 211 rpvil~G~g~~~~~a~~~l~~lae~~~~Pv~~t~~--~~g~~~~~hp~~~G~~~g~~~~~~~~~~l~~aD~vl~iG~~~~ 288 (552)
T 1ovm_A 211 RTALLADFLVLRHGLKHALQKWVKEVPMAHATMLM--GKGIFDERQAGFYGTYSGSASTGAVKEAIEGADTVLCVGTRFT 288 (552)
T ss_dssp CEEEEECHHHHHTTCHHHHHHHHHHSCCEEEECGG--GTTSSCTTSTTCCCCCCGGGSCHHHHHHHHTSSEEEEESCCCC
T ss_pred CCEEEECcCccccCHHHHHHHHHHHHCCCEEEccc--cCccCCCCCcCeecccCCCCCCHHHHHHHHhCCEEEEECCCCC
Confidence 45666777876556778999999999999877754 44666654 466652 42 135799999995321
Q ss_pred hhhhhc----cCCCcEEEEEcCCCCCCcccccceEEeecHHHHHHHHHhhcc
Q 018544 304 IQHLAG----MRDSKVIVAVNKDADAPIFQVADYGLVGDLFEVIPELLEKFP 351 (354)
Q Consensus 304 ~QH~~G----~~~s~~IVAIN~D~~ApIf~~aDygiVgD~~~vlp~l~~~l~ 351 (354)
.-.+.+ ..+.+ +|-||.|+.- | .. .+-.--++.+++.+|++ ++
T Consensus 289 ~~~~~~~~~~~~~~~-~i~id~d~~~-~-~~-~~~~~~~~~~~l~~L~~-l~ 335 (552)
T 1ovm_A 289 DTLTAGFTHQLTPAQ-TIEVQPHAAR-V-GD-VWFTGIPMNQAIETLVE-LC 335 (552)
T ss_dssp TTTTTTTCCCCCTTT-EEEECSSEEE-E-TT-EEEESCCHHHHHHHHHH-HH
T ss_pred cccccccccCCCCCe-EEEEeCChhe-e-CC-cccCCccHHHHHHHHHh-Cc
Confidence 111212 12344 6678887741 1 00 11111245788888876 53
No 91
>3p0f_A Uridine phosphorylase 2; transferase; HET: BAU; 1.54A {Homo sapiens} PDB: 3p0e_A* 2xrf_A
Probab=35.62 E-value=28 Score=32.31 Aligned_cols=53 Identities=19% Similarity=0.257 Sum_probs=37.7
Q ss_pred EEEeCccCCChhcHHHHHHHHHHhCCeecccHhhHhcCCCCCCceeccCCceeCCceEEEecccchhhhhhccCCCcEEE
Q 018544 238 VVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIV 317 (354)
Q Consensus 238 VV~~GrG~~~~e~~~~~~~LA~~lga~vG~SRp~vd~gw~p~~~qIGqtG~~V~P~lYia~GISGa~QH~~G~~~s~~IV 317 (354)
|+..+-|||.+.-=-.++||.+..+ +..++|+..|-+|.+|++| ++--++||
T Consensus 92 Vsv~~tGiG~psaaI~~~ELi~~~~------------------------~~~~~~~~iIriGtaGgl~----l~vGDvVI 143 (297)
T 3p0f_A 92 VLAISHGMGIPSISIMLHELIKLLH------------------------HARCCDVTIIRIGTSGGIG----IAPGTVVI 143 (297)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHH------------------------HTTCBSCEEEEEEEEEESS----SCTTCEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHHhcc------------------------ccccCcceEEEEEeecccc----ccCCcEEe
Confidence 3444567776543346888887765 2335588999999999999 77777777
Q ss_pred E
Q 018544 318 A 318 (354)
Q Consensus 318 A 318 (354)
+
T Consensus 144 a 144 (297)
T 3p0f_A 144 T 144 (297)
T ss_dssp E
T ss_pred e
Confidence 5
No 92
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=35.33 E-value=1.3e+02 Score=27.49 Aligned_cols=47 Identities=0% Similarity=-0.070 Sum_probs=30.1
Q ss_pred HHHHHHHHHHhc-----CccEEEeCCCCCccchHHHHHHHcCCCceeeeEEee
Q 018544 103 WAKLVHMIQQRE-----KYSHIISASGSFGKNVLPRAAALLDVSPITDVIEIS 150 (354)
Q Consensus 103 ~a~aLa~li~~~-----~P~lVL~g~T~~GrdlaprlAarL~~~lvtdv~~l~ 150 (354)
+...+..++++. +||+|.+... ..--++..++.+.+.|++.++-+..
T Consensus 105 ~~~~~~~~~~~~~~~~~~~Dii~~~~~-~~~~~~~~~~~~~~~~~v~~~h~~~ 156 (439)
T 3fro_A 105 FGRASVLLLNDLLREEPLPDVVHFHDW-HTVFAGALIKKYFKIPAVFTIHRLN 156 (439)
T ss_dssp HHHHHHHHHHHHTTTSCCCSEEEEESG-GGHHHHHHHHHHHCCCEEEEESCCC
T ss_pred HHHHHHHHHHHHhccCCCCeEEEecch-hhhhhHHHHhhccCCCEEEEecccc
Confidence 445555555544 9999988743 3333445556678999988776653
No 93
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=34.79 E-value=1e+02 Score=28.25 Aligned_cols=102 Identities=11% Similarity=0.084 Sum_probs=58.1
Q ss_pred cccceeEEEEEecCCccChHHHHHHHHHHhcCC-CCcEEEEEEcCCCCHHHHHHHHhhcCCCccEEEEEeCCCCCCCCHH
Q 018544 23 SRSISTLVLGEHENGSIKSQSLSAVEAAKSLSD-DNSVSMLLAGSGPSFNEAVKHAASSHPSISQVLVADSDKFAYPIAE 101 (354)
Q Consensus 23 ~~~~~IlV~~E~~~g~l~~~slell~~A~~La~-~~~V~avv~G~~~~~~~~a~~l~~~~~GaD~V~~~~~~~l~~~~~e 101 (354)
.+.++|.|++-..+ ..++.|=.+.+-++ ..++.+|+-... +. +.+++ ..+|.. +++++... .+-+
T Consensus 86 ~~~~ri~vl~Sg~g-----~nl~~ll~~~~~g~l~~~i~~Visn~~---~a-~~~~A-~~~gIp-~~~~~~~~---~~r~ 151 (287)
T 3nrb_A 86 TDRKKVVIMVSKFD-----HCLGDLLYRHRLGELDMEVVGIISNHP---RE-ALSVS-LVGDIP-FHYLPVTP---ATKA 151 (287)
T ss_dssp TCCCEEEEEECSCC-----HHHHHHHHHHHHTSSCCEEEEEEESSC---GG-GCCCC-CCTTSC-EEECCCCG---GGHH
T ss_pred CCCcEEEEEEeCCC-----cCHHHHHHHHHCCCCCeEEEEEEeCCh---HH-HHHHH-HHcCCC-EEEEeccC---cchh
Confidence 45677888875443 45555544443333 357776655443 21 22333 357876 44443211 1234
Q ss_pred HHHHHHHHHHHhcCccEEEeCCCCCccchHHHHHHHcCC
Q 018544 102 PWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDV 140 (354)
Q Consensus 102 ~~a~aLa~li~~~~P~lVL~g~T~~GrdlaprlAarL~~ 140 (354)
.+-..+.+.+++.+||+|++.. +++-|.+.+-.+...
T Consensus 152 ~~~~~~~~~l~~~~~Dlivlag--ym~il~~~~l~~~~~ 188 (287)
T 3nrb_A 152 AQESQIKNIVTQSQADLIVLAR--YMQILSDDLSAFLSG 188 (287)
T ss_dssp HHHHHHHHHHHHHTCSEEEESS--CCSCCCHHHHHHHTT
T ss_pred hHHHHHHHHHHHhCCCEEEhhh--hhhhcCHHHHhhccC
Confidence 5666788889999999999764 455555655555543
No 94
>3dff_A Teicoplanin pseudoaglycone deacetylases ORF2; lipoglycopeptide, zinc dependen hydrolase; HET: MSE PG4; 1.60A {Actinoplanes teichomyceticus} PDB: 2x9l_A* 3dfk_A* 3dfm_A 2xad_A*
Probab=33.56 E-value=82 Score=28.48 Aligned_cols=27 Identities=7% Similarity=-0.049 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHhcCccEEEeCCCCCc
Q 018544 101 EPWAKLVHMIQQREKYSHIISASGSFG 127 (354)
Q Consensus 101 e~~a~aLa~li~~~~P~lVL~g~T~~G 127 (354)
+...+.|.+++++.+|++|+.+....+
T Consensus 134 ~~l~~~l~~~ir~~~PdvV~t~~~~d~ 160 (273)
T 3dff_A 134 GEVADDIRSIIDEFDPTLVVTCAAIGE 160 (273)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECCTTC
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCCC
Confidence 577788999999999999999865555
No 95
>3hba_A Putative phosphosugar isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE CIT; 2.00A {Shewanella denitrificans OS217}
Probab=32.87 E-value=1.6e+02 Score=27.23 Aligned_cols=97 Identities=18% Similarity=0.119 Sum_probs=58.6
Q ss_pred CCCcEEEEeCccCCChhcHHHHHHHHHHhCCeecccHhhHhcCCCCCCceeccCCceeCCceEEEecccchhhhhhcc--
Q 018544 233 GSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGM-- 310 (354)
Q Consensus 233 ~~A~iVV~~GrG~~~~e~~~~~~~LA~~lga~vG~SRp~vd~gw~p~~~qIGqtG~~V~P~lYia~GISGa~QH~~G~-- 310 (354)
.+++.|+-.|.|-..--....-..|-..+|-.+-+.-|-...-+ .....-+.+|.|++--||-...+.-.
T Consensus 40 ~~~~~I~i~G~G~S~~aa~~~~~~l~~~~g~~v~~~~~~~~~~~--------~~~~~~~~dl~i~iS~SG~T~e~~~a~~ 111 (334)
T 3hba_A 40 FKPKFVMIVGRGSSDHAGVFAKYLFEIEASIPTFAAAPSVASVY--------GKTLKLAGGLVIVISQSGRSPDILAQAR 111 (334)
T ss_dssp HCCSCEEEESSGGGCHHHHHHHHHHHHHHCCCEEECCHHHHHTS--------CCCCCCTTCEEEEEESSSCCHHHHHHHH
T ss_pred CCCCEEEEEEechHHHHHHHHHHHHHHHhCCcEEEEcchHHHHh--------cccCCCCCCEEEEEeCCCCCHHHHHHHH
Confidence 67899999999954422222222333345644443322211112 11223356899999999965543222
Q ss_pred ----CCCcEEEEEcCCCCCCcccccceEEeec
Q 018544 311 ----RDSKVIVAVNKDADAPIFQVADYGLVGD 338 (354)
Q Consensus 311 ----~~s~~IVAIN~D~~ApIf~~aDygiVgD 338 (354)
++++ +|+|-++++.|+-+.||+.+.-.
T Consensus 112 ~ak~~g~~-~i~IT~~~~S~la~~ad~~l~~~ 142 (334)
T 3hba_A 112 MAKNAGAF-CVALVNDETAPIKDIVDVVIPLR 142 (334)
T ss_dssp HHHHTTCE-EEEEESCTTSGGGGTSSEEEECC
T ss_pred HHHHcCCc-EEEEeCCCCChHHHhcCEeeeec
Confidence 3444 67888899999999999998643
No 96
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=32.51 E-value=2.4e+02 Score=24.31 Aligned_cols=75 Identities=11% Similarity=0.177 Sum_probs=45.9
Q ss_pred CcEEEEEEcCCCCHHHHHHHHhhcCCCccEEEEEeCCCCCCCCHHHHHHHHHHHHHhcCccEEEeCCCCCccchHHHHHH
Q 018544 57 NSVSMLLAGSGPSFNEAVKHAASSHPSISQVLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAA 136 (354)
Q Consensus 57 ~~V~avv~G~~~~~~~~a~~l~~~~~GaD~V~~~~~~~l~~~~~e~~a~aLa~li~~~~P~lVL~g~T~~GrdlaprlAa 136 (354)
.+|.+|+--.++ ....+.+. .+|.. ++.++...+. +.+.|-+.+.+.+++.+||+|++.+ +++-|.+.+=.
T Consensus 31 ~~I~~Vit~~~~--~~v~~~A~--~~gIp-~~~~~~~~~~--~~~~~~~~~~~~l~~~~~Dliv~a~--y~~il~~~~l~ 101 (212)
T 3av3_A 31 ARVALLVCDRPG--AKVIERAA--RENVP-AFVFSPKDYP--SKAAFESEILRELKGRQIDWIALAG--YMRLIGPTLLS 101 (212)
T ss_dssp EEEEEEEESSTT--CHHHHHHH--HTTCC-EEECCGGGSS--SHHHHHHHHHHHHHHTTCCEEEESS--CCSCCCHHHHH
T ss_pred CeEEEEEeCCCC--cHHHHHHH--HcCCC-EEEeCccccc--chhhhHHHHHHHHHhcCCCEEEEch--hhhhCCHHHHh
Confidence 577777665331 22333333 47887 5554443332 4567777888899999999999864 56666665555
Q ss_pred HcCC
Q 018544 137 LLDV 140 (354)
Q Consensus 137 rL~~ 140 (354)
....
T Consensus 102 ~~~~ 105 (212)
T 3av3_A 102 AYEG 105 (212)
T ss_dssp HTTT
T ss_pred hhcC
Confidence 5543
No 97
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=31.83 E-value=2.1e+02 Score=26.13 Aligned_cols=104 Identities=9% Similarity=0.044 Sum_probs=61.6
Q ss_pred cccceeEEEEEecCCccChHHHHHHHHHHhcCC-CCcEEEEEEcCCCCHHHHHHHHhhcCCCccEEEEEeCCCCCCCCHH
Q 018544 23 SRSISTLVLGEHENGSIKSQSLSAVEAAKSLSD-DNSVSMLLAGSGPSFNEAVKHAASSHPSISQVLVADSDKFAYPIAE 101 (354)
Q Consensus 23 ~~~~~IlV~~E~~~g~l~~~slell~~A~~La~-~~~V~avv~G~~~~~~~~a~~l~~~~~GaD~V~~~~~~~l~~~~~e 101 (354)
++.++|.|++-..+ ..++.|=.+.+-++ ..++.+|+-...+ + +.+++ ..+|.. +++++... .+-+
T Consensus 87 ~~~~ri~vl~Sg~g-----~nl~~ll~~~~~g~l~~~i~~Visn~p~---~-~~~~A-~~~gIp-~~~~~~~~---~~r~ 152 (288)
T 3obi_A 87 ETRRKVMLLVSQSD-----HCLADILYRWRVGDLHMIPTAIVSNHPR---E-TFSGF-DFGDIP-FYHFPVNK---DTRR 152 (288)
T ss_dssp TSCEEEEEEECSCC-----HHHHHHHHHHHTTSSCEEEEEEEESSCG---G-GSCCT-TTTTCC-EEECCCCT---TTHH
T ss_pred CCCcEEEEEEcCCC-----CCHHHHHHHHHCCCCCeEEEEEEcCCCh---h-HHHHH-HHcCCC-EEEeCCCc---ccHH
Confidence 45677888875443 46655555544333 3567666554411 1 12333 357887 44443321 2345
Q ss_pred HHHHHHHHHHHhcCccEEEeCCCCCccchHHHHHHHcCCCc
Q 018544 102 PWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSP 142 (354)
Q Consensus 102 ~~a~aLa~li~~~~P~lVL~g~T~~GrdlaprlAarL~~~l 142 (354)
.+-..+.+.+++.+||+|++.. +++-|.+.+=.+...++
T Consensus 153 ~~~~~~~~~l~~~~~Dlivlag--y~~il~~~~l~~~~~~~ 191 (288)
T 3obi_A 153 QQEAAITALIAQTHTDLVVLAR--YMQILSDEMSARLAGRC 191 (288)
T ss_dssp HHHHHHHHHHHHHTCCEEEESS--CCSCCCHHHHHHTTTSE
T ss_pred HHHHHHHHHHHhcCCCEEEhhh--hhhhCCHHHHhhhcCCe
Confidence 5666788889999999999875 56666666666665443
No 98
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=31.39 E-value=2.3e+02 Score=25.53 Aligned_cols=38 Identities=8% Similarity=-0.095 Sum_probs=24.6
Q ss_pred HHHHHHHHhcCccEEEeCCCCCccchH-HHHHHHcCCCce
Q 018544 105 KLVHMIQQREKYSHIISASGSFGKNVL-PRAAALLDVSPI 143 (354)
Q Consensus 105 ~aLa~li~~~~P~lVL~g~T~~Grdla-prlAarL~~~lv 143 (354)
..+.+++++.+||+|++-... .-.++ ...|.+++.|++
T Consensus 81 ~~l~~~l~~~~pDvv~~~~~~-~~~~~~~~~a~~~~ip~v 119 (376)
T 1v4v_A 81 PQAARALKEMGADYVLVHGDT-LTTFAVAWAAFLEGIPVG 119 (376)
T ss_dssp HHHHHHHHHTTCSEEEEESSC-HHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHcCCCEEEEeCCh-HHHHHHHHHHHHhCCCEE
Confidence 456778888999999983221 11233 345666788875
No 99
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=31.32 E-value=2.4e+02 Score=25.41 Aligned_cols=63 Identities=10% Similarity=-0.000 Sum_probs=45.6
Q ss_pred HHHHHHHhhcCCCccEEEEEeCCCCCCCCHHHHHHHHHHHHHhcC-ccEEEeCCCCCccchHHHHHHH
Q 018544 71 NEAVKHAASSHPSISQVLVADSDKFAYPIAEPWAKLVHMIQQREK-YSHIISASGSFGKNVLPRAAAL 137 (354)
Q Consensus 71 ~~~a~~l~~~~~GaD~V~~~~~~~l~~~~~e~~a~aLa~li~~~~-P~lVL~g~T~~GrdlaprlAar 137 (354)
.+.++.+. ..|+|.+.+.|.- ....|+.+.+.+..+.+... ..+.+=++...|..++-.+++.
T Consensus 158 ~~~~~~~~--~~G~d~i~l~Dt~--G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~an~l~Ai 221 (295)
T 1ydn_A 158 ASVTEQLF--SLGCHEVSLGDTI--GRGTPDTVAAMLDAVLAIAPAHSLAGHYHDTGGRALDNIRVSL 221 (295)
T ss_dssp HHHHHHHH--HHTCSEEEEEETT--SCCCHHHHHHHHHHHHTTSCGGGEEEEEBCTTSCHHHHHHHHH
T ss_pred HHHHHHHH--hcCCCEEEecCCC--CCcCHHHHHHHHHHHHHhCCCCeEEEEECCCcchHHHHHHHHH
Confidence 33455555 4799999998754 44689999999988877654 3477778888888777766553
No 100
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4
Probab=30.88 E-value=49 Score=25.50 Aligned_cols=39 Identities=13% Similarity=0.146 Sum_probs=30.8
Q ss_pred HHHHHHHHHHhcCccEEEeCCCCCccchHHHHHHHcCCCce
Q 018544 103 WAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPI 143 (354)
Q Consensus 103 ~a~aLa~li~~~~P~lVL~g~T~~GrdlaprlAarL~~~lv 143 (354)
.++.|.+.+++.++|+|++|.. |+.++-++.....+|++
T Consensus 97 ~~~~I~~~a~~~~~dliV~G~~--g~sv~~~vl~~a~~PVl 135 (138)
T 1q77_A 97 LSEEVKKFVEGKGYELVVWACY--PSAYLCKVIDGLNLASL 135 (138)
T ss_dssp HHHHHHHHHTTSCCSEEEECSC--CGGGTHHHHHHSSSEEE
T ss_pred HHHHHHHHHHhcCCCEEEEeCC--CCchHHHHHHhCCCceE
Confidence 3567888888899999999976 34778888888877764
No 101
>1j5x_A Glucosamine-6-phosphate deaminase; structural genomics, TM0813, glucosamine-6-phosphate deamina PSI, protein structure initiative; 1.80A {Thermotoga maritima} SCOP: c.80.1.1
Probab=30.48 E-value=38 Score=31.62 Aligned_cols=99 Identities=13% Similarity=0.058 Sum_probs=53.9
Q ss_pred CCCCCcEEEEeCccCCChhcHHHHHHHHHHhCCeecccHhhHhcCCCCCCceeccCCceeCCceEEEecccchhhhhhc-
Q 018544 231 DLGSARIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAG- 309 (354)
Q Consensus 231 ~L~~A~iVV~~GrG~~~~e~~~~~~~LA~~lga~vG~SRp~vd~gw~p~~~qIGqtG~~V~P~lYia~GISGa~QH~~G- 309 (354)
.+.+++.|+-.|.|-..--...+-..|...+|-.+-+-.+- .+.-....+. . .|+|.|++--||-...+.-
T Consensus 48 ~l~~~~~I~i~G~G~S~~~a~~~~~~l~~~~g~~v~~~~~~---~~~~~~~~~~--~---~~dlvI~iS~SG~T~e~l~a 119 (342)
T 1j5x_A 48 QKNLTDEVLFVGCGSSYNLALTISYYFERVLKIRTKAIPAG---EVAFQKIPDL--E---ERGLAFLFSRTGNTTEVLLA 119 (342)
T ss_dssp ----CCEEEEEESTHHHHHHHHHHHHHHHHHCCEEEEEEHH---HHHTTCSCCC--C---SSEEEEEECSSSCCHHHHHH
T ss_pred HhCCCCEEEEEEchHHHHHHHHHHHHHHHhhCCeEEEECch---HHHhcCcccC--C---CCeEEEEEcCCCCCHHHHHH
Confidence 46788999999998432111112222222255433322221 1111111111 1 1579999999997664432
Q ss_pred c-----CCCcEEEEEcCCCCCCcccccceEEeec
Q 018544 310 M-----RDSKVIVAVNKDADAPIFQVADYGLVGD 338 (354)
Q Consensus 310 ~-----~~s~~IVAIN~D~~ApIf~~aDygiVgD 338 (354)
+ +++ .+|+|=++++.|+.+.||+.+.-.
T Consensus 120 ~~~ak~~Ga-~vIaIT~~~~S~La~~ad~~l~~~ 152 (342)
T 1j5x_A 120 NDVLKKRNH-RTIGITIEEESRLAKESDLPLVFP 152 (342)
T ss_dssp HHHHHHTTE-EEEEEESCTTSHHHHHSSEEEECC
T ss_pred HHHHHHCCC-CEEEEECCCCCHHHHhcCEEEEcC
Confidence 1 223 578898899999999999988654
No 102
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=30.46 E-value=2.6e+02 Score=25.41 Aligned_cols=87 Identities=14% Similarity=0.097 Sum_probs=52.4
Q ss_pred HHHHHHHHhcCC-C--CcEEEEEEcCCCCHH--HHHHHHhhcCCCccEEEEEeCCCCCCCCHHHHHHHHHHHHHhcCccE
Q 018544 44 LSAVEAAKSLSD-D--NSVSMLLAGSGPSFN--EAVKHAASSHPSISQVLVADSDKFAYPIAEPWAKLVHMIQQREKYSH 118 (354)
Q Consensus 44 lell~~A~~La~-~--~~V~avv~G~~~~~~--~~a~~l~~~~~GaD~V~~~~~~~l~~~~~e~~a~aLa~li~~~~P~l 118 (354)
..+++++.+|.+ . ..+..+++|..+ .+ +..+++. ..+| +.+++.. ....+... ++++ ..|+
T Consensus 268 ~~li~a~~~l~~~~~~~~~~l~i~G~g~-~~~~~~l~~~~-~~~~-~~~~~~g-----~~~~~~~~----~~~~--~adv 333 (439)
T 3fro_A 268 DVLLKAIEILSSKKEFQEMRFIIIGKGD-PELEGWARSLE-EKHG-NVKVITE-----MLSREFVR----ELYG--SVDF 333 (439)
T ss_dssp HHHHHHHHHHHTSGGGGGEEEEEECCCC-HHHHHHHHHHH-HHCT-TEEEECS-----CCCHHHHH----HHHT--TCSE
T ss_pred HHHHHHHHHHHhcccCCCeEEEEEcCCC-hhHHHHHHHHH-hhcC-CEEEEcC-----CCCHHHHH----HHHH--HCCE
Confidence 445666666654 2 478888999763 22 3334444 2467 6555421 12233333 3333 4589
Q ss_pred EEeCCCCCccchHHHHHHHcCCCcee
Q 018544 119 IISASGSFGKNVLPRAAALLDVSPIT 144 (354)
Q Consensus 119 VL~g~T~~GrdlaprlAarL~~~lvt 144 (354)
+++++...|--+...=|...|.|+++
T Consensus 334 ~v~ps~~e~~~~~~~EAma~G~Pvi~ 359 (439)
T 3fro_A 334 VIIPSYFEPFGLVALEAMCLGAIPIA 359 (439)
T ss_dssp EEECBSCCSSCHHHHHHHHTTCEEEE
T ss_pred EEeCCCCCCccHHHHHHHHCCCCeEE
Confidence 99998877777777778888888764
No 103
>3dfi_A Pseudoaglycone deacetylase DBV21; single alpha-beta domain, hydrolase; 2.10A {Actinoplanes teichomyceticus}
Probab=30.29 E-value=1.1e+02 Score=27.67 Aligned_cols=27 Identities=0% Similarity=-0.104 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHhcCccEEEeCCCCCc
Q 018544 101 EPWAKLVHMIQQREKYSHIISASGSFG 127 (354)
Q Consensus 101 e~~a~aLa~li~~~~P~lVL~g~T~~G 127 (354)
+...+.|.+++++.+|++|+.+....+
T Consensus 131 ~~~~~~l~~~ir~~~PdvV~t~~~~d~ 157 (270)
T 3dfi_A 131 AAIREDIESMIAECDPTLVLTCVAIGK 157 (270)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECCTTC
T ss_pred HHHHHHHHHHHHHcCCCEEEeCCCCCC
Confidence 467788899999999999999865555
No 104
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=30.24 E-value=35 Score=31.71 Aligned_cols=33 Identities=33% Similarity=0.289 Sum_probs=25.4
Q ss_pred EEEEcCCCCCCcccccceEEeecHHHHHHHHHh
Q 018544 316 IVAVNKDADAPIFQVADYGLVGDLFEVIPELLE 348 (354)
Q Consensus 316 IVAIN~D~~ApIf~~aDygiVgD~~~vlp~l~~ 348 (354)
+|++|.||++|-+++||-.++-|...-...+++
T Consensus 27 vv~vd~~~~~~~~~~aD~~~~~~~~~d~~~~~~ 59 (363)
T 4ffl_A 27 VVLVDKNPQALIRNYADEFYCFDVIKEPEKLLE 59 (363)
T ss_dssp EEEEESCTTCTTTTTSSEEEECCTTTCHHHHHH
T ss_pred EEEEeCCCCChhHhhCCEEEECCCCcCHHHHHH
Confidence 778999999999999998887776543444443
No 105
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=30.02 E-value=1.4e+02 Score=28.25 Aligned_cols=35 Identities=14% Similarity=0.171 Sum_probs=22.8
Q ss_pred cEEEEEEcCCCCHHHHHHHHhhcCCCccEEEEEeCCC
Q 018544 58 SVSMLLAGSGPSFNEAVKHAASSHPSISQVLVADSDK 94 (354)
Q Consensus 58 ~V~avv~G~~~~~~~~a~~l~~~~~GaD~V~~~~~~~ 94 (354)
.-.++++|.+..-..+++.|+ ..|+-++.++|++.
T Consensus 34 ~~~VlIvGaGGlGs~va~~La--~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALI--AWGVRKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHH--HTTCCEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHH--HcCCCEEEEecCCE
Confidence 345667776632245667776 47888888887654
No 106
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=29.65 E-value=2.7e+02 Score=24.01 Aligned_cols=68 Identities=9% Similarity=0.197 Sum_probs=39.7
Q ss_pred cEEEEEEcCCCCHHHHHHHHhhcCCCccEEEEEeCCCCCCCCHHHHHHHHHHHHHhcCccEEEeCCCCCccchHHHH
Q 018544 58 SVSMLLAGSGPSFNEAVKHAASSHPSISQVLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRA 134 (354)
Q Consensus 58 ~V~avv~G~~~~~~~~a~~l~~~~~GaD~V~~~~~~~l~~~~~e~~a~aLa~li~~~~P~lVL~g~T~~Grdlaprl 134 (354)
++.+|+--+++ ....+.+. .+|.. ++.++...+. +-+.|-+.+.+.+++.+||++++.+ +++-+.+.+
T Consensus 30 ~i~~Vvs~~~~--~~~~~~A~--~~gIp-~~~~~~~~~~--~r~~~~~~~~~~l~~~~~Dliv~a~--y~~il~~~~ 97 (216)
T 2ywr_A 30 SIELVISDNPK--AYAIERCK--KHNVE-CKVIQRKEFP--SKKEFEERMALELKKKGVELVVLAG--FMRILSHNF 97 (216)
T ss_dssp EEEEEEESCTT--CHHHHHHH--HHTCC-EEECCGGGSS--SHHHHHHHHHHHHHHTTCCEEEESS--CCSCCCHHH
T ss_pred eEEEEEeCCCC--hHHHHHHH--HcCCC-EEEeCccccc--chhhhhHHHHHHHHhcCCCEEEEeC--chhhCCHHH
Confidence 67777665431 22222222 36877 4554443332 3466767788888999999999765 344444443
No 107
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=29.59 E-value=1.5e+02 Score=22.54 Aligned_cols=85 Identities=20% Similarity=0.301 Sum_probs=56.6
Q ss_pred cEEEEeCccCCChhcH-HHHHHHHHHhCCeecccHhhHhcCCCCCCceeccCCceeCCceEEEecccchhhhhhccCCCc
Q 018544 236 RIVVTGGRGLKSAENF-KMIEKLAEKLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSK 314 (354)
Q Consensus 236 ~iVV~~GrG~~~~e~~-~~~~~LA~~lga~vG~SRp~vd~gw~p~~~qIGqtG~~V~P~lYia~GISGa~QH~~G~~~s~ 314 (354)
+++++.|-|+++- =+ +.+++.++..|=.+ + .-+++++...++ +.+.|
T Consensus 6 kIlvvC~~G~~TS-ll~~kl~~~~~~~gi~~---------------------------~-i~~~~~~~~~~~---~~~~D 53 (109)
T 2l2q_A 6 NILLVCGAGMSTS-MLVQRIEKYAKSKNINA---------------------------T-IEAIAETRLSEV---VDRFD 53 (109)
T ss_dssp EEEEESSSSCSSC-HHHHHHHHHHHHHTCSE---------------------------E-EEEECSTTHHHH---TTTCS
T ss_pred EEEEECCChHhHH-HHHHHHHHHHHHCCCCe---------------------------E-EEEecHHHHHhh---cCCCC
Confidence 5899999999985 22 45666666553211 1 246677776665 46778
Q ss_pred EEEEEcCC-------------CCCCc--ccccceEEeecHHHHHHHHHhhcccC
Q 018544 315 VIVAVNKD-------------ADAPI--FQVADYGLVGDLFEVIPELLEKFPEK 353 (354)
Q Consensus 315 ~IVAIN~D-------------~~ApI--f~~aDygiVgD~~~vlp~l~~~l~~~ 353 (354)
+|+.-..= .+-|+ ...-+|| .-|-.+++..+.+.++++
T Consensus 54 ~Ii~t~~l~~~~~~~~~~~~~~~~pv~~I~~~~y~-~~d~~~vl~~i~~~l~~~ 106 (109)
T 2l2q_A 54 VVLLAPQSRFNKKRLEEITKPKGIPIEIINTIDYG-TMNGEKVLQLAINAFNNK 106 (109)
T ss_dssp EEEECSCCSSHHHHHHHHHHHHTCCEEECCHHHHH-HTCHHHHHHHHHHHHHHC
T ss_pred EEEECCccHHHHHHHHHHhcccCCCEEEEChHHhc-cCCHHHHHHHHHHHHhcc
Confidence 77754332 25788 5556787 569999999988888754
No 108
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=29.33 E-value=76 Score=24.38 Aligned_cols=103 Identities=16% Similarity=0.147 Sum_probs=59.2
Q ss_pred ceeEEEEEecCCccChHHHHHHHHHHhcCC--CCcEEEEEEcCCCC--H------------HHH----HHHHhhcCCCc-
Q 018544 26 ISTLVLGEHENGSIKSQSLSAVEAAKSLSD--DNSVSMLLAGSGPS--F------------NEA----VKHAASSHPSI- 84 (354)
Q Consensus 26 ~~IlV~~E~~~g~l~~~slell~~A~~La~--~~~V~avv~G~~~~--~------------~~~----a~~l~~~~~Ga- 84 (354)
.+|+|-.+. .+.+..++..|.+|++ +.+++++-+-+... . .+. .+++. ...|.
T Consensus 3 ~~ILv~~D~-----s~~s~~al~~a~~la~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~g~~ 76 (137)
T 2z08_A 3 KTILLAYDG-----SEHARRAAEVAKAEAEAHGARLIVVHAYEPVPDYLGEPFFEEALRRRLERAEGVLEEAR-ALTGVP 76 (137)
T ss_dssp SEEEEECCS-----SHHHHHHHHHHHHHHHHHTCEEEEEEEECC--------------CHHHHHHHHHHHHHH-HHHCCC
T ss_pred ceEEEEeCC-----CHHHHHHHHHHHHHHhhcCCEEEEEEEecCCCccccccchHHHHHHHHHHHHHHHHHHH-HHcCCC
Confidence 356666553 3567888888888875 57788775432100 0 011 11111 01354
Q ss_pred c-EEEEEeCCCCCCCCHHHHHHHHHHHHHhcCccEEEeCCCCCc-------cchHHHHHHHcCCCce
Q 018544 85 S-QVLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFG-------KNVLPRAAALLDVSPI 143 (354)
Q Consensus 85 D-~V~~~~~~~l~~~~~e~~a~aLa~li~~~~P~lVL~g~T~~G-------rdlaprlAarL~~~lv 143 (354)
+ +..+... ..++.|.+.+++.++|+|++|....+ ..++-++..+..+|++
T Consensus 77 ~~~~~~~~g---------~~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~~pVl 134 (137)
T 2z08_A 77 KEDALLLEG---------VPAEAILQAARAEKADLIVMGTRGLGALGSLFLGSQSQRVVAEAPCPVL 134 (137)
T ss_dssp GGGEEEEES---------SHHHHHHHHHHHTTCSEEEEESSCTTCCSCSSSCHHHHHHHHHCSSCEE
T ss_pred ccEEEEEec---------CHHHHHHHHHHHcCCCEEEECCCCCchhhhhhhccHHHHHHhcCCCCEE
Confidence 2 1222211 23567888899999999999985432 2566777777777765
No 109
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=29.08 E-value=2e+02 Score=22.34 Aligned_cols=87 Identities=13% Similarity=0.121 Sum_probs=54.0
Q ss_pred HHHHHHHHHhcCCCCcEEEEEEcCCCCHHHHHHHHhhcCCCccEEEEEeCCCCCCCCHHHHHHHHHHHHHhcCccEEEeC
Q 018544 43 SLSAVEAAKSLSDDNSVSMLLAGSGPSFNEAVKHAASSHPSISQVLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISA 122 (354)
Q Consensus 43 slell~~A~~La~~~~V~avv~G~~~~~~~~a~~l~~~~~GaD~V~~~~~~~l~~~~~e~~a~aLa~li~~~~P~lVL~g 122 (354)
-..++.+..+|.+...+..+++|..+..+.+.+.+. .+|. .+.+ . +.+. +-+.++++ ..|++++|
T Consensus 17 ~~~li~a~~~l~~~~~~~l~i~G~g~~~~~~~~~~~--~~~~-~v~~--g-----~~~~---~~~~~~~~--~adv~v~p 81 (166)
T 3qhp_A 17 QSVLIKAVALSKYKQDIVLLLKGKGPDEKKIKLLAQ--KLGV-KAEF--G-----FVNS---NELLEILK--TCTLYVHA 81 (166)
T ss_dssp HHHHHHHHHTCTTGGGEEEEEECCSTTHHHHHHHHH--HHTC-EEEC--C-----CCCH---HHHHHHHT--TCSEEEEC
T ss_pred HHHHHHHHHHhccCCCeEEEEEeCCccHHHHHHHHH--HcCC-eEEE--e-----ecCH---HHHHHHHH--hCCEEEEC
Confidence 455677777775445788999997642333333333 3565 4443 2 2221 22344443 45899999
Q ss_pred CCCCccchHHHHHHHcCC-Ccee
Q 018544 123 SGSFGKNVLPRAAALLDV-SPIT 144 (354)
Q Consensus 123 ~T~~GrdlaprlAarL~~-~lvt 144 (354)
+...|--+...=|...|. |+++
T Consensus 82 s~~e~~~~~~~Eama~G~vPvi~ 104 (166)
T 3qhp_A 82 ANVESEAIACLEAISVGIVPVIA 104 (166)
T ss_dssp CCSCCCCHHHHHHHHTTCCEEEE
T ss_pred CcccCccHHHHHHHhcCCCcEEe
Confidence 987777777777888886 8876
No 110
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=28.86 E-value=28 Score=33.53 Aligned_cols=101 Identities=9% Similarity=0.032 Sum_probs=61.7
Q ss_pred cChHHHHHHHH---HHhcCCCCcEEEEE--EcCCC----------CHHHHHHHHhhcCCCccEEEEEeC--CCCCCCCH-
Q 018544 39 IKSQSLSAVEA---AKSLSDDNSVSMLL--AGSGP----------SFNEAVKHAASSHPSISQVLVADS--DKFAYPIA- 100 (354)
Q Consensus 39 l~~~slell~~---A~~La~~~~V~avv--~G~~~----------~~~~~a~~l~~~~~GaD~V~~~~~--~~l~~~~~- 100 (354)
.++.-.|+|-. +++.. ..++++|+ +|... ..+-+++-+. ..|+|+|+.++- ++.++|-.
T Consensus 92 ~nd~lmeLl~~idA~k~as-A~rit~ViPY~~YaRQdr~~~r~~i~ak~vA~lL~--~aGad~vit~DlHs~q~qgfF~i 168 (379)
T 2ji4_A 92 VNTTIMELLIMVYACKTSC-AKSIIGVIPYFPYSKQCKMRKRGSIVSKLLASMMC--KAGLTHLITMDLHQKEIQGFFNI 168 (379)
T ss_dssp HHHHHHHHHHHHHHHHHTT-CSEEEEECSSCSSCCC-------CCHHHHHHHHHH--HTTCCEEEEESCSSGGGGGGSSS
T ss_pred ccHHHHHHHHHHHHHHhcC-CceEEEEEeccCccccccccCCCcHHHHHHHHHHH--HcCCCEEEEecCCChhhccccCC
Confidence 45666777654 33332 25788875 35321 1223444454 489999999873 33333310
Q ss_pred ----HHHHHHHHHHHHhc--C-ccEEEeCCCCCccchHHHHHHHcCCCc
Q 018544 101 ----EPWAKLVHMIQQRE--K-YSHIISASGSFGKNVLPRAAALLDVSP 142 (354)
Q Consensus 101 ----e~~a~aLa~li~~~--~-P~lVL~g~T~~GrdlaprlAarL~~~l 142 (354)
..-...|++.+++. + .+.++++-..-|--+|..+|.+|+.|+
T Consensus 169 pvD~l~A~p~La~~I~~~~~~~~~~vVV~pd~GGv~~A~~lA~~L~~pl 217 (379)
T 2ji4_A 169 PVDNLRASPFLLQYIQEEIPDYRNAVIVAKSPASAKRAQSFAERLRLGI 217 (379)
T ss_dssp CEEEECCHHHHHHHHHHHSTTGGGEEEEESSGGGHHHHHHHHHHTTCEE
T ss_pred ceeeeccHHHHHHHHHHhcccCCCcEEEEEccchHHHHHHHHHHhCCCE
Confidence 11134566666553 2 367888888889999999999999886
No 111
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=28.73 E-value=3e+02 Score=24.15 Aligned_cols=104 Identities=11% Similarity=0.111 Sum_probs=57.0
Q ss_pred cccceeEEEEEecCCccChHHHHHHHHHHhcCC-CCcEEEEEEcCCCCHHHHHHHHhhcCCCccEEEEEeCCCCCCCCHH
Q 018544 23 SRSISTLVLGEHENGSIKSQSLSAVEAAKSLSD-DNSVSMLLAGSGPSFNEAVKHAASSHPSISQVLVADSDKFAYPIAE 101 (354)
Q Consensus 23 ~~~~~IlV~~E~~~g~l~~~slell~~A~~La~-~~~V~avv~G~~~~~~~~a~~l~~~~~GaD~V~~~~~~~l~~~~~e 101 (354)
..+|+|.+++--. +. ....+|.+-.+ .+ +.+|.+|+--.++ ....+.+. .+|.. ++.++...+. +-+
T Consensus 20 ~~~~rI~~l~SG~-g~---~~~~~l~~l~~-~~~~~~I~~Vvt~~~~--~~~~~~A~--~~gIp-~~~~~~~~~~--~r~ 87 (229)
T 3auf_A 20 GHMIRIGVLISGS-GT---NLQAILDGCRE-GRIPGRVAVVISDRAD--AYGLERAR--RAGVD-ALHMDPAAYP--SRT 87 (229)
T ss_dssp TTCEEEEEEESSC-CH---HHHHHHHHHHT-TSSSEEEEEEEESSTT--CHHHHHHH--HTTCE-EEECCGGGSS--SHH
T ss_pred CCCcEEEEEEeCC-cH---HHHHHHHHHHh-CCCCCeEEEEEcCCCc--hHHHHHHH--HcCCC-EEEECccccc--chh
Confidence 4457888886322 22 23333332211 11 2467777665331 22222222 47887 5555543332 345
Q ss_pred HHHHHHHHHHHhcCccEEEeCCCCCccchHHHHHHHcCC
Q 018544 102 PWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDV 140 (354)
Q Consensus 102 ~~a~aLa~li~~~~P~lVL~g~T~~GrdlaprlAarL~~ 140 (354)
.|-+.+.+.+++.+||+|++.+ +++-|.+.+=.....
T Consensus 88 ~~~~~~~~~l~~~~~Dliv~ag--y~~IL~~~~l~~~~~ 124 (229)
T 3auf_A 88 AFDAALAERLQAYGVDLVCLAG--YMRLVRGPMLTAFPN 124 (229)
T ss_dssp HHHHHHHHHHHHTTCSEEEESS--CCSCCCHHHHHHSTT
T ss_pred hccHHHHHHHHhcCCCEEEEcC--hhHhCCHHHHhhccC
Confidence 6777788889999999999875 566665555555443
No 112
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=27.85 E-value=84 Score=24.87 Aligned_cols=41 Identities=15% Similarity=0.016 Sum_probs=30.3
Q ss_pred HHHHHHHHHHhcCccEEEeCCCCCc---c----chHHHHHHHcCCCce
Q 018544 103 WAKLVHMIQQREKYSHIISASGSFG---K----NVLPRAAALLDVSPI 143 (354)
Q Consensus 103 ~a~aLa~li~~~~P~lVL~g~T~~G---r----dlaprlAarL~~~lv 143 (354)
.++.|.+.+++.++|+|++|....+ + .++-++..+..+|++
T Consensus 108 ~~~~I~~~a~~~~~dlIV~G~~g~~~~~~~~~GSv~~~vl~~~~~pVl 155 (162)
T 1mjh_A 108 PHEEIVKIAEDEGVDIIIMGSHGKTNLKEILLGSVTENVIKKSNKPVL 155 (162)
T ss_dssp HHHHHHHHHHHTTCSEEEEESCCSSCCTTCSSCHHHHHHHHHCCSCEE
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCCCCccceEecchHHHHHHhCCCCEE
Confidence 3567888899999999999986433 2 466677777777755
No 113
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=27.75 E-value=1.6e+02 Score=27.48 Aligned_cols=91 Identities=15% Similarity=0.068 Sum_probs=50.7
Q ss_pred cceeEEEEEecCCccChHHHHHHHHHHhcCCCCcEEEEEEcCCCCHHHHHHHHhhcCCCccEEEEEeCCCCCCCCHHHHH
Q 018544 25 SISTLVLGEHENGSIKSQSLSAVEAAKSLSDDNSVSMLLAGSGPSFNEAVKHAASSHPSISQVLVADSDKFAYPIAEPWA 104 (354)
Q Consensus 25 ~~~IlV~~E~~~g~l~~~slell~~A~~La~~~~V~avv~G~~~~~~~~a~~l~~~~~GaD~V~~~~~~~l~~~~~e~~a 104 (354)
.++|+|+.- |. ..+.++.++++++ -++.++ ...+ ....... -+|+.+.++. .+.
T Consensus 7 ~~~ilI~g~---g~---~~~~~~~a~~~~G--~~~v~v--~~~~-~~~~~~~------~ad~~~~~~~-----~d~---- 60 (403)
T 4dim_A 7 NKRLLILGA---GR---GQLGLYKAAKELG--IHTIAG--TMPN-AHKPCLN------LADEISYMDI-----SNP---- 60 (403)
T ss_dssp CCEEEEECC---CG---GGHHHHHHHHHHT--CEEEEE--ECSS-CCHHHHH------HCSEEEECCT-----TCH----
T ss_pred CCEEEEECC---cH---hHHHHHHHHHHCC--CEEEEE--cCCC-CCCcchh------hCCeEEEecC-----CCH----
Confidence 456777643 22 3677888899987 454444 3210 0111111 2567766532 122
Q ss_pred HHHHHHHHhcCccEEEeCCCCCccchHHHHHHHcCCC
Q 018544 105 KLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVS 141 (354)
Q Consensus 105 ~aLa~li~~~~P~lVL~g~T~~GrdlaprlAarL~~~ 141 (354)
+.|.+++++.++|.|+.+.....-....+++.++|.+
T Consensus 61 ~~l~~~~~~~~~d~v~~~~~~~~~~~~a~~~~~~gl~ 97 (403)
T 4dim_A 61 DEVEQKVKDLNLDGAATCCLDTGIVSLARICDKENLV 97 (403)
T ss_dssp HHHHHHTTTSCCSEEECCSCSTTHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHcCCCEEEeCCcchhHHHHHHHHHHcCcC
Confidence 4566777888899888753333334556666776664
No 114
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=27.38 E-value=95 Score=31.02 Aligned_cols=36 Identities=19% Similarity=0.278 Sum_probs=27.4
Q ss_pred HHHHHHHhcCccEEEeCCCCCccchHHHH---HHHcCCCce
Q 018544 106 LVHMIQQREKYSHIISASGSFGKNVLPRA---AALLDVSPI 143 (354)
Q Consensus 106 aLa~li~~~~P~lVL~g~T~~Grdlaprl---AarL~~~lv 143 (354)
-+.+.+++.+||+++.+ +.|+.++-++ |.||++|++
T Consensus 429 ~l~~~i~~~~pDLlig~--s~~k~~a~~~~~~~~~~giP~i 467 (523)
T 3u7q_B 429 HLRSLVFTDKPDFMIGN--SYGKFIQRDTLHKGKEFEVPLI 467 (523)
T ss_dssp HHHHHHHHTCCSEEEEC--TTHHHHHHHHHHHCGGGCCCEE
T ss_pred HHHHHHHhcCCCEEEEC--ccHHHHHHHhhcccccCCCceE
Confidence 35567778899999855 4677777776 778899986
No 115
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=26.83 E-value=45 Score=24.10 Aligned_cols=28 Identities=21% Similarity=0.378 Sum_probs=21.1
Q ss_pred ceEEEecccchhhhhhccCCCcEEEEEcCC
Q 018544 293 ELYMAFGVSGAIQHLAGMRDSKVIVAVNKD 322 (354)
Q Consensus 293 ~lYia~GISGa~QH~~G~~~s~~IVAIN~D 322 (354)
-+++.. +.|++-+ +|++.-|.|++||.-
T Consensus 28 ~~~v~~-v~~spA~-aGl~~GD~I~~vng~ 55 (88)
T 3bpu_A 28 GQRVKQ-IVDSPRS-RGLKEGDLIVEVNKK 55 (88)
T ss_dssp SEEEEE-CCC--CC-TTCCTTCEEEEETTE
T ss_pred cEEEEE-ecCChhH-hCCCCCCEEEEECCE
Confidence 356655 6788888 999999999999973
No 116
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=26.77 E-value=98 Score=28.11 Aligned_cols=39 Identities=10% Similarity=-0.027 Sum_probs=24.8
Q ss_pred HHHHHHHHhcCccEEEeCCCCCccchHHH-HHHHcCCCcee
Q 018544 105 KLVHMIQQREKYSHIISASGSFGKNVLPR-AAALLDVSPIT 144 (354)
Q Consensus 105 ~aLa~li~~~~P~lVL~g~T~~Grdlapr-lAarL~~~lvt 144 (354)
..+.+++++.+||+|++-.... -.+... +|.+++.|++.
T Consensus 76 ~~l~~~l~~~~pDvv~~~~~~~-~~~~~~~~a~~~~ip~v~ 115 (384)
T 1vgv_A 76 EGLKPILAEFKPDVVLVHGDTT-TTLATSLAAFYQRIPVGH 115 (384)
T ss_dssp HHHHHHHHHHCCSEEEEETTCH-HHHHHHHHHHTTTCCEEE
T ss_pred HHHHHHHHHhCCCEEEEeCCch-HHHHHHHHHHHHCCCEEE
Confidence 5677788889999999754311 123333 44567888764
No 117
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=26.74 E-value=92 Score=23.78 Aligned_cols=43 Identities=12% Similarity=0.004 Sum_probs=31.7
Q ss_pred CHHHHHHHHHHHHHhcCccEEEeC-----CCCCc------cchHHHHHHHcCCCc
Q 018544 99 IAEPWAKLVHMIQQREKYSHIISA-----SGSFG------KNVLPRAAALLDVSP 142 (354)
Q Consensus 99 ~~e~~a~aLa~li~~~~P~lVL~g-----~T~~G------rdlaprlAarL~~~l 142 (354)
+.+...+.|.+++++++++.|++| +.+.| +..+-+|..+ +.|+
T Consensus 35 ~~~~~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~-~lpV 88 (98)
T 1iv0_A 35 TLEEDVEALLDFVRREGLGKLVVGLPLRTDLKESAQAGKVLPLVEALRAR-GVEV 88 (98)
T ss_dssp CHHHHHHHHHHHHHHHTCCEEEEECCCCCCSSSCCCSSTTHHHHHHHHHT-TCEE
T ss_pred CcHHHHHHHHHHHHHcCCCEEEEeeccCCCCCcCHHHHHHHHHHHHHhcC-CCCE
Confidence 346677899999999999999998 33333 3667888776 6554
No 118
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=26.74 E-value=1.1e+02 Score=28.65 Aligned_cols=105 Identities=11% Similarity=0.120 Sum_probs=60.9
Q ss_pred CCccChHHHHHH--H------H--HHhcCCCCcEEEEEEcCCCCHHHHHHHHhhcCCCccEEEEEeCCCCCCCCH-----
Q 018544 36 NGSIKSQSLSAV--E------A--AKSLSDDNSVSMLLAGSGPSFNEAVKHAASSHPSISQVLVADSDKFAYPIA----- 100 (354)
Q Consensus 36 ~g~l~~~slell--~------~--A~~La~~~~V~avv~G~~~~~~~~a~~l~~~~~GaD~V~~~~~~~l~~~~~----- 100 (354)
+.+...++.+++ . . -.+|. .-.++++|.+..-..+++.|+ ..|+-++.++|++..+..+-
T Consensus 89 ~~~~~rY~Rq~~~~~~~g~~~~~~q~~L~---~~~VlvvG~GglGs~va~~La--~aGvg~i~lvD~D~Ve~sNL~Rq~l 163 (353)
T 3h5n_A 89 STENNRYSRNFLHYQSYGANPVLVQDKLK---NAKVVILGCGGIGNHVSVILA--TSGIGEIILIDNDQIENTNLTRQVL 163 (353)
T ss_dssp SCTTSTTHHHHHHHHHTTCCHHHHHHHHH---TCEEEEECCSHHHHHHHHHHH--HHTCSEEEEEECCBCCGGGGGTCTT
T ss_pred HHHHHHhhhhhhhhhccCCChHHHHHHHh---CCeEEEECCCHHHHHHHHHHH--hCCCCeEEEECCCcCcccccccccC
Confidence 455667777753 1 1 23453 235677887642345777787 57999999998765332111
Q ss_pred -------HHHHHHHHHHHHhc-----------------------CccEEEeCCCC-C-ccchHHHHHHHcCCCceee
Q 018544 101 -------EPWAKLVHMIQQRE-----------------------KYSHIISASGS-F-GKNVLPRAAALLDVSPITD 145 (354)
Q Consensus 101 -------e~~a~aLa~li~~~-----------------------~P~lVL~g~T~-~-GrdlaprlAarL~~~lvtd 145 (354)
..-++++++.+++. ++|+|+...+. . .|.+..+.+.+.+.|++.-
T Consensus 164 ~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~i~~~~~~~~~~~~DlVvd~~Dn~~~~r~~ln~~c~~~~~p~i~~ 240 (353)
T 3h5n_A 164 FSEDDVGKNKTEVIKRELLKRNSEISVSEIALNINDYTDLHKVPEADIWVVSADHPFNLINWVNKYCVRANQPYINA 240 (353)
T ss_dssp CCGGGTTSBHHHHHHHHHHHHCTTSEEEEEECCCCSGGGGGGSCCCSEEEECCCCSTTHHHHHHHHHHHTTCCEEEE
T ss_pred CChHHCCChHHHHHHHHHHHHCCCCeEEEeecccCchhhhhHhccCCEEEEecCChHHHHHHHHHHHHHhCCCEEEE
Confidence 11233444444333 34666655433 3 4667777888888888753
No 119
>2kxh_B Peptide of FAR upstream element-binding protein 1; RRM, FIR, FBP, protein-protein complex, protein binding; NMR {Homo sapiens}
Probab=26.72 E-value=60 Score=19.66 Aligned_cols=27 Identities=22% Similarity=0.512 Sum_probs=18.3
Q ss_pred eCccCCC---hhcHHHHHHHHHHhCCeecc
Q 018544 241 GGRGLKS---AENFKMIEKLAEKLGAAVGA 267 (354)
Q Consensus 241 ~GrG~~~---~e~~~~~~~LA~~lga~vG~ 267 (354)
||-|+++ .+.++.++++|.++|+..+.
T Consensus 1 ~~~g~~~daFadA~~RaRQIaAKig~~~~~ 30 (31)
T 2kxh_B 1 GAMGYVNDAFKDALQRARQIAAKIGGDAGT 30 (31)
T ss_dssp CCSSSCSSHHHHHHHHHHHHHHHTTCCCSC
T ss_pred CCCCcchHHHHHHHHHHHHHHHHhcCCCCC
Confidence 3455553 23447889999999987654
No 120
>2x5e_A UPF0271 protein PA4511; unknown function; HET: CIT; 2.30A {Pseudomonas aeruginosa} PDB: 2xu2_A*
Probab=25.97 E-value=67 Score=29.16 Aligned_cols=48 Identities=8% Similarity=-0.085 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHhcCccEEEeCCCCCccchHHHHHHHcCCCceeeeE
Q 018544 100 AEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDVI 147 (354)
Q Consensus 100 ~e~~a~aLa~li~~~~P~lVL~g~T~~GrdlaprlAarL~~~lvtdv~ 147 (354)
.+.+++++.+.++..+|+++|++-........-+.|.++|.+++..+.
T Consensus 127 d~~~A~av~~av~~~d~~L~l~~l~~~~gs~~~~~A~~~Gl~~~~E~F 174 (252)
T 2x5e_A 127 DDELLRAVLDACAAYRKGLPLMVLALADNGRELELADEADVPLLFEAF 174 (252)
T ss_dssp CHHHHHHHHHHHHHHCTTCCEEEECCSCCHHHHHHHHHHTCCEEEEEE
T ss_pred CHHHHHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHcCCcEEEEEe
Confidence 357889999999999999999985433345577899999999987765
No 121
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=25.63 E-value=36 Score=30.64 Aligned_cols=37 Identities=16% Similarity=0.369 Sum_probs=32.5
Q ss_pred EEEeCccCCChhcHHHHHHHHHHhCC--------eecccHhhHhc
Q 018544 238 VVTGGRGLKSAENFKMIEKLAEKLGA--------AVGATRAVVDA 274 (354)
Q Consensus 238 VV~~GrG~~~~e~~~~~~~LA~~lga--------~vG~SRp~vd~ 274 (354)
.||+|-|-|++..|+++-+.|....- .+|.||.+...
T Consensus 67 avSVGLGaGDp~Q~~~Va~Ia~~~~P~HVNQvFtgag~t~~~L~~ 111 (249)
T 3m0z_A 67 ALSVGLGAGDPNQSAMVSEISRQVQPQHVNQVFTGVATSRALLGQ 111 (249)
T ss_dssp CEEEECSSSCGGGHHHHHHHHHHHCCSEECCBGGGHHHHHHHHTS
T ss_pred ceEEecCCCCHHHHHHHHHHHHhcCCCcccccccchHHHHHhccC
Confidence 49999999999999999999999985 48999997653
No 122
>1jlj_A Gephyrin; globular alpha/beta fold, structural protein; 1.60A {Homo sapiens} SCOP: c.57.1.1 PDB: 1ihc_A
Probab=25.01 E-value=3e+02 Score=23.28 Aligned_cols=54 Identities=11% Similarity=0.030 Sum_probs=34.3
Q ss_pred CCccEEEEEeCCCCCCCCHHHHHHHHHHHHHhcCccEEEe-CCCCCc-cchHHHHHHHcC
Q 018544 82 PSISQVLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIIS-ASGSFG-KNVLPRAAALLD 139 (354)
Q Consensus 82 ~GaD~V~~~~~~~l~~~~~e~~a~aLa~li~~~~P~lVL~-g~T~~G-rdlaprlAarL~ 139 (354)
+|++-++..--+ -+.+...++|.+++++.+.|+|++ |.+..| +|+-+..-.+++
T Consensus 49 ~G~~v~~~~iv~----Dd~~~I~~al~~a~~~~~~DlVIttGGtg~g~~D~t~eal~~~~ 104 (189)
T 1jlj_A 49 LGGTISAYKIVP----DEIEEIKETLIDWCDEKELNLILTTGGTGFAPRDVTPEATKEVI 104 (189)
T ss_dssp TCCEEEEEEEEC----SCHHHHHHHHHHHHHTSCCSEEEEESCCSSSTTCCHHHHHHHHC
T ss_pred CCcEEEEEEEeC----CCHHHHHHHHHHHhhcCCCCEEEEcCCCCCCCcccHHHHHHHHh
Confidence 577654332211 145777888888877557888777 555555 588887766653
No 123
>1di6_A MOGA, molybdenum cofactor biosynthetic enzyme; MOCO, MOCO biosynthesis, gephyrin function; 1.45A {Escherichia coli} SCOP: c.57.1.1 PDB: 1di7_A
Probab=24.82 E-value=3.2e+02 Score=23.26 Aligned_cols=40 Identities=8% Similarity=0.090 Sum_probs=28.6
Q ss_pred CHHHHHHHHHHHHHhcCccEEEe-CCCCCc-cchHHHHHHHc
Q 018544 99 IAEPWAKLVHMIQQREKYSHIIS-ASGSFG-KNVLPRAAALL 138 (354)
Q Consensus 99 ~~e~~a~aLa~li~~~~P~lVL~-g~T~~G-rdlaprlAarL 138 (354)
+.+...++|.+++++.+.|+||. |.+..| +|+-+..-..+
T Consensus 50 d~~~I~~al~~a~~~~~~DlVitTGGtg~g~~D~T~ea~~~~ 91 (195)
T 1di6_A 50 EQAIIEQTLCELVDEMSCHLVLTTGGTGPARRDVTPDATLAV 91 (195)
T ss_dssp CHHHHHHHHHHHHHTSCCSEEEEESCCSSSTTCCHHHHHHHT
T ss_pred CHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCccHHHHHHHH
Confidence 35777888888887657888877 455555 68888776665
No 124
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=24.81 E-value=30 Score=28.80 Aligned_cols=95 Identities=17% Similarity=0.195 Sum_probs=55.9
Q ss_pred CCCCcEEEEeCccCCChhcHHHHHHHHHHh---CCeecccHhhHhcCCCCCCceeccCCceeCCceEEEecccchhhhhh
Q 018544 232 LGSARIVVTGGRGLKSAENFKMIEKLAEKL---GAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLA 308 (354)
Q Consensus 232 L~~A~iVV~~GrG~~~~e~~~~~~~LA~~l---ga~vG~SRp~vd~gw~p~~~qIGqtG~~V~P~lYia~GISGa~QH~~ 308 (354)
|.+|+.|+-.|.|-.. ...+.++..| |-.+=+ ... +.+.+..+....=.-++.|++--||-...+.
T Consensus 36 i~~a~~I~i~G~G~S~----~~a~~~~~~l~~~g~~~~~----~~~---~~~~~~~~~~~~~~~d~~i~iS~sG~t~~~~ 104 (187)
T 3sho_A 36 ICRADHVIVVGMGFSA----AVAVFLGHGLNSLGIRTTV----LTE---GGSTLTITLANLRPTDLMIGVSVWRYLRDTV 104 (187)
T ss_dssp HHHCSEEEEECCGGGH----HHHHHHHHHHHHTTCCEEE----ECC---CTHHHHHHHHTCCTTEEEEEECCSSCCHHHH
T ss_pred HHhCCEEEEEecCchH----HHHHHHHHHHHhcCCCEEE----ecC---CchhHHHHHhcCCCCCEEEEEeCCCCCHHHH
Confidence 5678999999999532 3444455444 321110 000 0112222222222347999999999765432
Q ss_pred c------cCCCcEEEEEcCCCCCCcccccceEEeec
Q 018544 309 G------MRDSKVIVAVNKDADAPIFQVADYGLVGD 338 (354)
Q Consensus 309 G------~~~s~~IVAIN~D~~ApIf~~aDygiVgD 338 (354)
- =++++ ||+|=.+++.|+-+.||+-+.-.
T Consensus 105 ~~~~~ak~~g~~-vi~IT~~~~s~l~~~ad~~l~~~ 139 (187)
T 3sho_A 105 AALAGAAERGVP-TMALTDSSVSPPARIADHVLVAA 139 (187)
T ss_dssp HHHHHHHHTTCC-EEEEESCTTSHHHHHCSEEEECC
T ss_pred HHHHHHHHCCCC-EEEEeCCCCCcchhhCcEEEEec
Confidence 1 23444 67888889999999999988643
No 125
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=24.39 E-value=2.4e+02 Score=25.88 Aligned_cols=63 Identities=11% Similarity=0.038 Sum_probs=46.2
Q ss_pred HHHHHHhhcCCCccEEEEEeCCCCCCCCHHHHHHHHHHHHHhc-CccEEEeCCCCCccchHHHHHHHc
Q 018544 72 EAVKHAASSHPSISQVLVADSDKFAYPIAEPWAKLVHMIQQRE-KYSHIISASGSFGKNVLPRAAALL 138 (354)
Q Consensus 72 ~~a~~l~~~~~GaD~V~~~~~~~l~~~~~e~~a~aLa~li~~~-~P~lVL~g~T~~GrdlaprlAarL 138 (354)
+.++.+. .+|+|.+++.|.- ....|+.+.+.+..+.+.. +-.+=+=.+...|.-+|--+|+..
T Consensus 161 ~~~~~~~--~~Ga~~i~l~DT~--G~~~P~~v~~lv~~l~~~~~~~~l~~H~Hnd~Gla~AN~laAv~ 224 (307)
T 1ydo_A 161 RLSEALF--EFGISELSLGDTI--GAANPAQVETVLEALLARFPANQIALHFHDTRGTALANMVTALQ 224 (307)
T ss_dssp HHHHHHH--HHTCSCEEEECSS--CCCCHHHHHHHHHHHHTTSCGGGEEEECBGGGSCHHHHHHHHHH
T ss_pred HHHHHHH--hcCCCEEEEcCCC--CCcCHHHHHHHHHHHHHhCCCCeEEEEECCCCchHHHHHHHHHH
Confidence 3555665 4799999998774 4578999999888887665 234555577888998888777754
No 126
>3h5l_A Putative branched-chain amino acid ABC transporter; structural genomics, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi}
Probab=24.30 E-value=1.9e+02 Score=26.68 Aligned_cols=48 Identities=15% Similarity=0.056 Sum_probs=39.4
Q ss_pred CCHHHHHHHHHHHHHhcCccEEEeCCCCCccchHHHHHHHcCCCceee
Q 018544 98 PIAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITD 145 (354)
Q Consensus 98 ~~~e~~a~aLa~li~~~~P~lVL~g~T~~GrdlaprlAarL~~~lvtd 145 (354)
.+++.......+++.+.+.+.|+-+.++.-..-...++.+.++|+++-
T Consensus 66 ~~~~~a~~~a~~li~~~~v~aiiG~~~s~~~~a~~~~~~~~~ip~i~~ 113 (419)
T 3h5l_A 66 KGVDVVIQSAQRLIDRDNASALIAGYNLENGTALHDVAADAGVIAMHA 113 (419)
T ss_dssp CCHHHHHHHHHHHHHTTCCSEEECSCCSSCSCHHHHHHHHHTCEEEEC
T ss_pred CCHHHHHHHHHHHhhhcCCeEEEccccchhHHHhHHHHHHcCCeEEEc
Confidence 478888889999999889999997776666666667889999999974
No 127
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=24.19 E-value=1.9e+02 Score=25.52 Aligned_cols=106 Identities=8% Similarity=-0.048 Sum_probs=59.5
Q ss_pred ccceeEEEEEecCCccChHHHHHHHHHHhcCC--CCcEEEEEEcCCCC--------------------------HHHHHH
Q 018544 24 RSISTLVLGEHENGSIKSQSLSAVEAAKSLSD--DNSVSMLLAGSGPS--------------------------FNEAVK 75 (354)
Q Consensus 24 ~~~~IlV~~E~~~g~l~~~slell~~A~~La~--~~~V~avv~G~~~~--------------------------~~~~a~ 75 (354)
.+-+|+|..+..+ .+..++..|..|++ +.+++++-+-+... .+++.+
T Consensus 6 ~~k~ILv~~D~s~-----~s~~al~~A~~lA~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 80 (319)
T 3olq_A 6 KYQNLLVVIDPNQ-----DDQPALRRAVYIVQRNGGRIKAFLPVYDLSYDMTTLLSPDERNAMRKGVINQKTAWIKQQAR 80 (319)
T ss_dssp CSCEEEEECCTTC-----SCCHHHHHHHHHHHHHCCEEEEEEEECCGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccceEEEEECCCc-----ccHHHHHHHHHHHHHcCCeEEEEEEecccchhhccccChhhHHHHHHHHHHHHHHHHHHHHH
Confidence 3456888886543 35566667766665 57888776522100 011112
Q ss_pred HHhhcCCCccEEEEEeCCCCCCCCHHHHHHHHHHHHHhcCccEEEeCCCCCc-------cchHHHHHHHcCCCce
Q 018544 76 HAASSHPSISQVLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIISASGSFG-------KNVLPRAAALLDVSPI 143 (354)
Q Consensus 76 ~l~~~~~GaD~V~~~~~~~l~~~~~e~~a~aLa~li~~~~P~lVL~g~T~~G-------rdlaprlAarL~~~lv 143 (354)
.+. ..|.+--+.+.. .. .....|.+.+++.++|+|++|....+ ...+-++..+.++|++
T Consensus 81 ~~~--~~~v~~~~~~~~----~g---~~~~~i~~~a~~~~~DLiV~G~~g~~~~~~~~~Gs~~~~vl~~~~~PVl 146 (319)
T 3olq_A 81 YYL--EAGIQIDIKVIW----HN---RPYEAIIEEVITDKHDLLIKMAHQHDKLGSLIFTPLDWQLLRKCPAPVW 146 (319)
T ss_dssp HHH--HTTCCEEEEEEE----CS---CHHHHHHHHHHHHTCSEEEEEEBCC--CCSCBCCHHHHHHHHHCSSCEE
T ss_pred HHh--hcCCeEEEEEEe----cC---ChHHHHHHHHHhcCCCEEEEecCcCchhhcccccccHHHHHhcCCCCEE
Confidence 222 246653333320 01 13456777788889999999875432 2456677777777765
No 128
>2e5f_A Hypothetical protein PH0510; structural genomics, sugar binding protein, NPPSFA, national on protein structural and functional analyses; 1.35A {Pyrococcus horikoshii} PDB: 2dec_A* 2df8_A 2cb0_A*
Probab=24.17 E-value=34 Score=31.68 Aligned_cols=47 Identities=17% Similarity=0.269 Sum_probs=33.4
Q ss_pred CCceEEEecccchhhhhhc-cCCC-cEEEEEcCCCCCCcccccceEEeec
Q 018544 291 APELYMAFGVSGAIQHLAG-MRDS-KVIVAVNKDADAPIFQVADYGLVGD 338 (354)
Q Consensus 291 ~P~lYia~GISGa~QH~~G-~~~s-~~IVAIN~D~~ApIf~~aDygiVgD 338 (354)
+|+|.|++--||-...+.- ++.+ -.+|+|=++ +.|+-+.||+.+.-.
T Consensus 79 ~~dlvI~iS~SG~T~e~l~a~~~aka~viaIT~~-~S~La~~ad~~l~~~ 127 (325)
T 2e5f_A 79 EVELAVGISRSGETTEILLALEKINVKKLGITTR-ESSLTRMCDYSLVVP 127 (325)
T ss_dssp SCSEEEEECSSSCCHHHHHHHHTCCSCEEEEESS-SCHHHHHSSEEEECC
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHhCCCEEEEECC-CCHHHHhcCEEEecC
Confidence 4579999999997654322 2222 246677667 999999999988654
No 129
>2xed_A Putative maleate isomerase; nicotinic acid catabolism, cofactor-independent CIS-trans isomerase; 1.95A {Nocardia farcinica} PDB: 2xec_A
Probab=24.07 E-value=3.8e+02 Score=23.84 Aligned_cols=68 Identities=6% Similarity=0.014 Sum_probs=44.1
Q ss_pred HHHHhhcCCCccEEEEEeCCCCC------CCCHHHHHHHHHHHHHhcCccEEEeC-CCCCcc-chHHHHHHHcCCCceee
Q 018544 74 VKHAASSHPSISQVLVADSDKFA------YPIAEPWAKLVHMIQQREKYSHIISA-SGSFGK-NVLPRAAALLDVSPITD 145 (354)
Q Consensus 74 a~~l~~~~~GaD~V~~~~~~~l~------~~~~e~~a~aLa~li~~~~P~lVL~g-~T~~Gr-dlaprlAarL~~~lvtd 145 (354)
.+.+. .+|.+ |.......+. ..+++.+.+++.++ .+.+.|.|+++ -|-..- .+...+...++.|+++-
T Consensus 164 ~~~l~--~~Gi~-v~~~~~~~~~~~~~~g~~~~~~l~~~~~~l-~~~gadaIvLg~CT~l~~~~~~~~le~~lg~PVids 239 (273)
T 2xed_A 164 VAYLE--AEGFT-ISDWRALEVADNTEVGCIPGEQVMAAARSL-DLSEVDALVISCAVQMPSLPLVETAEREFGIPVLSA 239 (273)
T ss_dssp HHHHH--HTTCE-EEEEEECCCCBHHHHHTCCHHHHHHHHHHS-CCTTCSEEEEESSSSSCCTTHHHHHHHHHSSCEEEH
T ss_pred HHHHH--HCCCE-EeccccCCCccchhhcccCHHHHHHHHHHH-hhCCCCEEEEcCCCCcchHHhHHHHHHHhCCCEEcH
Confidence 34454 47988 4444333321 33455565555555 44578999999 777765 68899999999997643
No 130
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=23.97 E-value=2.3e+02 Score=24.61 Aligned_cols=99 Identities=13% Similarity=0.074 Sum_probs=54.7
Q ss_pred ceeEEEEEecCCccChHHHHHHHHHHhcCC-CCcEEEEEEcCCCCHHHHHHHHhhcCCCccEEEEEeCCCCCCCCHHHHH
Q 018544 26 ISTLVLGEHENGSIKSQSLSAVEAAKSLSD-DNSVSMLLAGSGPSFNEAVKHAASSHPSISQVLVADSDKFAYPIAEPWA 104 (354)
Q Consensus 26 ~~IlV~~E~~~g~l~~~slell~~A~~La~-~~~V~avv~G~~~~~~~~a~~l~~~~~GaD~V~~~~~~~l~~~~~e~~a 104 (354)
++|.|++=-.+ ..++.|-.+.+-++ +.+|.+|+--..+ ...+ +.+. .+|.. +++++...+. +.+.+-
T Consensus 8 ~ri~vl~SG~g-----snl~all~~~~~~~l~~~I~~Visn~~~-a~~l-~~A~--~~gIp-~~~~~~~~~~--~r~~~d 75 (209)
T 4ds3_A 8 NRVVIFISGGG-----SNMEALIRAAQAPGFPAEIVAVFSDKAE-AGGL-AKAE--AAGIA-TQVFKRKDFA--SKEAHE 75 (209)
T ss_dssp EEEEEEESSCC-----HHHHHHHHHHTSTTCSEEEEEEEESCTT-CTHH-HHHH--HTTCC-EEECCGGGSS--SHHHHH
T ss_pred ccEEEEEECCc-----HHHHHHHHHHHcCCCCcEEEEEEECCcc-cHHH-HHHH--HcCCC-EEEeCccccC--CHHHHH
Confidence 34666664332 34554444443222 2577777664321 2221 2222 37887 5555543332 356677
Q ss_pred HHHHHHHHhcCccEEEeCCCCCccchHHHHHHHc
Q 018544 105 KLVHMIQQREKYSHIISASGSFGKNVLPRAAALL 138 (354)
Q Consensus 105 ~aLa~li~~~~P~lVL~g~T~~GrdlaprlAarL 138 (354)
+.+.+.+++.+||+|++.+ +++-|.+.+=.+.
T Consensus 76 ~~~~~~l~~~~~Dliv~ag--y~~il~~~~l~~~ 107 (209)
T 4ds3_A 76 DAILAALDVLKPDIICLAG--YMRLLSGRFIAPY 107 (209)
T ss_dssp HHHHHHHHHHCCSEEEESS--CCSCCCHHHHGGG
T ss_pred HHHHHHHHhcCCCEEEEec--cccCcCHHHHhhc
Confidence 7888899999999999765 4555555444443
No 131
>1xw8_A UPF0271 protein YBGL; NESG, northeast structural genomics consortium, structural genomics, protein structure initiative, PSI, X-RAY; 2.00A {Escherichia coli} SCOP: c.6.2.5
Probab=23.74 E-value=85 Score=28.50 Aligned_cols=44 Identities=16% Similarity=0.101 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHhcCccEEEeCCCCCccchHHHHHHHcCCCceeeeE
Q 018544 101 EPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDVI 147 (354)
Q Consensus 101 e~~a~aLa~li~~~~P~lVL~g~T~~GrdlaprlAarL~~~lvtdv~ 147 (354)
+.+++++.+.++..+|+++|++ ..| ...-+.|.++|.+++..+.
T Consensus 117 ~~~A~av~~av~~~d~~L~l~~--l~g-s~~~~~A~~~Gl~~~~E~F 160 (252)
T 1xw8_A 117 AQLADAIARAVYACDPALILVG--LAG-SELIRAGKQYGLTTREEVF 160 (252)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEE--ETT-SHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHHHHHHHHhCCCcEEEe--cCC-hHHHHHHHHcCCcEEEEEe
Confidence 5788999999999999999988 223 3467888899988886553
No 132
>3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae}
Probab=23.67 E-value=1.8e+02 Score=27.04 Aligned_cols=84 Identities=13% Similarity=0.160 Sum_probs=56.0
Q ss_pred cChHHHHHHHHHHhcCC--CCcEEEEEEcCCC----------------CHHHHHHHHhhcCCCccEEEEEeC-CCCCCCC
Q 018544 39 IKSQSLSAVEAAKSLSD--DNSVSMLLAGSGP----------------SFNEAVKHAASSHPSISQVLVADS-DKFAYPI 99 (354)
Q Consensus 39 l~~~slell~~A~~La~--~~~V~avv~G~~~----------------~~~~~a~~l~~~~~GaD~V~~~~~-~~l~~~~ 99 (354)
++.-=..+|..|+++++ +.+..++.+-+.+ ..++-.+.+. .+|+|.+++++- +.+....
T Consensus 32 vH~GHq~li~~a~~~a~~~~~~~vV~TFdphP~~v~~~~~~~~~~~Lt~~~eK~~ll~--~lGVD~v~~~~F~~~~a~ls 109 (308)
T 3op1_A 32 IHKGHQELFRVANKAARKDLLPIVVMTFNESPKIALEPYHPDLFLHILNPAERERKLK--REGVEELYLLDFSSQFASLT 109 (308)
T ss_dssp CCHHHHHHHHHHHHHSSTTCCCEEEEEESSCTHHHHSCCCGGGGCBSSCHHHHHHHHH--HHTCCEEEEECCCHHHHTCC
T ss_pred ccHHHHHHHHHHHHHHHhcCCceEEEEecCCHHHHhCccccCCcccCCCHHHHHHHHH--HcCCCEEEEecCCHHHHcCC
Confidence 55566788999998886 4566666665421 1123233344 479999999864 3466778
Q ss_pred HHHHHHHHHHHHHhcCccEEEeCCCC-Cc
Q 018544 100 AEPWAKLVHMIQQREKYSHIISASGS-FG 127 (354)
Q Consensus 100 ~e~~a~aLa~li~~~~P~lVL~g~T~-~G 127 (354)
++...+ +++++.+++.|++|.+. +|
T Consensus 110 ~e~Fv~---~ll~~l~~~~ivvG~DfrFG 135 (308)
T 3op1_A 110 AQEFFA---TYIKAMNAKIIVAGFDYTFG 135 (308)
T ss_dssp HHHHHH---HHHHHHTEEEEEEETTCCBT
T ss_pred HHHHHH---HHHHHcCCCEEEECcCCCCC
Confidence 888765 34567899999999874 44
No 133
>3lp8_A Phosphoribosylamine-glycine ligase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.15A {Ehrlichia chaffeensis}
Probab=23.47 E-value=74 Score=30.73 Aligned_cols=16 Identities=19% Similarity=0.233 Sum_probs=8.0
Q ss_pred HHHHHHHhcCccEEEe
Q 018544 106 LVHMIQQREKYSHIIS 121 (354)
Q Consensus 106 aLa~li~~~~P~lVL~ 121 (354)
.|.+++++.++|+|+.
T Consensus 74 ~l~~~a~~~~id~vv~ 89 (442)
T 3lp8_A 74 EVIQVCKKEKIELVVI 89 (442)
T ss_dssp HHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHhCCCEEEE
Confidence 3444455555555554
No 134
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=23.40 E-value=1.1e+02 Score=28.41 Aligned_cols=80 Identities=10% Similarity=-0.019 Sum_probs=43.0
Q ss_pred HHHHHHHHhcCCCCcEEEEEEcCCCCHHHHHHHHhhcCCCccEEEEEeCC----CCCCC----CH---HHHHHHHHHHHH
Q 018544 44 LSAVEAAKSLSDDNSVSMLLAGSGPSFNEAVKHAASSHPSISQVLVADSD----KFAYP----IA---EPWAKLVHMIQQ 112 (354)
Q Consensus 44 lell~~A~~La~~~~V~avv~G~~~~~~~~a~~l~~~~~GaD~V~~~~~~----~l~~~----~~---e~~a~aLa~li~ 112 (354)
.|++..|+++. -.+.+..- + .++ +++.+ ..|+| +++++-+ .+-.. .- ..+...+.+.++
T Consensus 153 ve~I~~A~~~g---L~Ti~~v~-~--~ee-A~amA--~agpD-iI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~ 222 (286)
T 2p10_A 153 VEMIAEAHKLD---LLTTPYVF-S--PED-AVAMA--KAGAD-ILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAAR 222 (286)
T ss_dssp HHHHHHHHHTT---CEECCEEC-S--HHH-HHHHH--HHTCS-EEEEECSCC---------CCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCC---CeEEEecC-C--HHH-HHHHH--HcCCC-EEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHH
Confidence 35577788875 44554443 3 244 34444 37999 5555544 22221 12 346667777888
Q ss_pred hcCccEEEe-CCCC--CccchHHH
Q 018544 113 REKYSHIIS-ASGS--FGKNVLPR 133 (354)
Q Consensus 113 ~~~P~lVL~-g~T~--~Grdlapr 133 (354)
+.+||++++ ++.+ .+.|+---
T Consensus 223 ~vnpdvivLc~gGpIstpeDv~~~ 246 (286)
T 2p10_A 223 TIRDDIIILSHGGPIANPEDARFI 246 (286)
T ss_dssp HHCSCCEEEEESTTCCSHHHHHHH
T ss_pred HhCCCcEEEecCCCCCCHHHHHHH
Confidence 889995554 4433 34454433
No 135
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=22.98 E-value=21 Score=32.51 Aligned_cols=35 Identities=29% Similarity=0.404 Sum_probs=31.4
Q ss_pred EEeCccCCChhcHHHHHHHHHHhCC--------eecccHhhHh
Q 018544 239 VTGGRGLKSAENFKMIEKLAEKLGA--------AVGATRAVVD 273 (354)
Q Consensus 239 V~~GrG~~~~e~~~~~~~LA~~lga--------~vG~SRp~vd 273 (354)
||+|-|-|++..|+++-+.|....- .+|.||.+..
T Consensus 90 vSVGLGaGDP~Q~~~Va~IA~~~~P~HVNQVFtgag~trg~L~ 132 (275)
T 3m6y_A 90 VSIGLGAGDNRQAAVVAEIAKHYPGSHINQVFPSVGATRANLG 132 (275)
T ss_dssp EEEECCTTCGGGHHHHHHHTTTCCCSEECCBGGGHHHHHHHHT
T ss_pred eEEecCCCCHHHHHHHHHHHHhcCCCcccccccchHHHHhhcC
Confidence 9999999999999999999998875 4899999775
No 136
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=22.96 E-value=68 Score=23.60 Aligned_cols=35 Identities=23% Similarity=0.199 Sum_probs=28.1
Q ss_pred ceeCCceEEEecccchhhhhhccCCCcEEEEEcCC
Q 018544 288 KIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKD 322 (354)
Q Consensus 288 ~~V~P~lYia~GISGa~QH~~G~~~s~~IVAIN~D 322 (354)
....+.+||.-=..|++-+.+|++--|.|++||.-
T Consensus 33 ~~~~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~ 67 (96)
T 2ego_A 33 QRVEMVTFVARVHESSPAQLAGLTPGDTIASVNGL 67 (96)
T ss_dssp --CCEEEEEEEECTTCHHHHTTCCTTCEEEEETTE
T ss_pred CCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCE
Confidence 33445678877778999999999999999999963
No 137
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=22.66 E-value=1.1e+02 Score=24.30 Aligned_cols=41 Identities=15% Similarity=-0.012 Sum_probs=28.9
Q ss_pred HHHHHHHHHHhcCccEEEeCCCCCc---c----chHHHHHHHcCCCce
Q 018544 103 WAKLVHMIQQREKYSHIISASGSFG---K----NVLPRAAALLDVSPI 143 (354)
Q Consensus 103 ~a~aLa~li~~~~P~lVL~g~T~~G---r----dlaprlAarL~~~lv 143 (354)
.++.|.+.+++.++|+|++|....+ + .++-++.....+|++
T Consensus 105 ~~~~I~~~a~~~~~DlIV~G~~g~~~~~~~~~Gsv~~~vl~~~~~PVl 152 (170)
T 2dum_A 105 PWDEIVKVAEEENVSLIILPSRGKLSLSHEFLGSTVMRVLRKTKKPVL 152 (170)
T ss_dssp HHHHHHHHHHHTTCSEEEEESCCCCC--TTCCCHHHHHHHHHCSSCEE
T ss_pred hHHHHHHHHHHcCCCEEEECCCCCCccccceechHHHHHHHhCCCCEE
Confidence 3567788888899999999976433 1 456666666666654
No 138
>3uf6_A LMO1369 protein; structural genomics, the center for structural genomics of I diseases, csgid, unknown function, transferase; HET: COD; 1.80A {Listeria monocytogenes} PDB: 3tng_A* 3u9e_A*
Probab=22.59 E-value=1.9e+02 Score=26.54 Aligned_cols=93 Identities=12% Similarity=0.043 Sum_probs=52.9
Q ss_pred CCCccccccccccceeEEEEEecCCccChHHHHHHHHHHhcCCCCcEEEEEEcCCCCHHHHHHHHhhcCCCccEEEEEeC
Q 018544 13 RPRCFHRPSISRSISTLVLGEHENGSIKSQSLSAVEAAKSLSDDNSVSMLLAGSGPSFNEAVKHAASSHPSISQVLVADS 92 (354)
Q Consensus 13 ~~~~~~~~~~~~~~~IlV~~E~~~g~l~~~slell~~A~~La~~~~V~avv~G~~~~~~~~a~~l~~~~~GaD~V~~~~~ 92 (354)
++.-+.....+....-.||.|-.+ .+.|.+|.++.+.+-+..+++|....+ + +. . .+.+-+++.
T Consensus 5 ~~~~~~~~~~~~~~kriv~~e~~d-------~~vl~Aa~~a~~eg~~~~ILvG~~~~I----~-~~--~--~~~~eIid~ 68 (291)
T 3uf6_A 5 TKSRFFSDVAETSSFVFAVAGADD-------EVVLETIRLALKQKLGKFLLFGKKEDK----T-LT--A--NESVTWIQT 68 (291)
T ss_dssp -CCCSSCSSCCCCCCEEEEETCCS-------HHHHHHHHHHHHTTCCEEEEEESSCCH----H-HH--T--STTEEEEEC
T ss_pred CHHHHHHHHhhcCCCeEEEeCCCC-------HHHHHHHHHHHHcCCceEEEEcCHHHH----h-hh--c--cCCCEEECC
Confidence 344455555556666788887543 334445444433245678889976333 1 22 1 222333332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCccEEEeCCCCC
Q 018544 93 DKFAYPIAEPWAKLVHMIQQREKYSHIISASGSF 126 (354)
Q Consensus 93 ~~l~~~~~e~~a~aLa~li~~~~P~lVL~g~T~~ 126 (354)
+ +.+..++.-..++++.+.|.++.|.+..
T Consensus 69 ~-----~~~~aar~a~~mV~~G~ADa~vsG~~~t 97 (291)
T 3uf6_A 69 D-----TAEAAAQGAILAVKNKEADILVKGFIPT 97 (291)
T ss_dssp C-----SHHHHHHHHHHHHHTTSCSEEEECSSCH
T ss_pred C-----ChHHHHHHHHHHHHCCCCCEEEECCCCh
Confidence 2 2334445567889999999999998643
No 139
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*
Probab=22.58 E-value=1.3e+02 Score=27.50 Aligned_cols=101 Identities=11% Similarity=0.063 Sum_probs=61.1
Q ss_pred cChHHHHHHHHHHhcCC--CCcEEEEEE--cCC----------C-CHHHHHHHHhhcCCCccEEEEEeC--CCCCCCCH-
Q 018544 39 IKSQSLSAVEAAKSLSD--DNSVSMLLA--GSG----------P-SFNEAVKHAASSHPSISQVLVADS--DKFAYPIA- 100 (354)
Q Consensus 39 l~~~slell~~A~~La~--~~~V~avv~--G~~----------~-~~~~~a~~l~~~~~GaD~V~~~~~--~~l~~~~~- 100 (354)
.++.-.|++-....+.+ ..++++|+. |.. + +.+-.++-+. .. +|+|+.+|- ++.++|-.
T Consensus 58 ~nd~lmeLl~~ida~k~~~A~~it~ViPY~~YaRQDr~~~~~e~isak~vA~ll~--~~-~d~vit~DlH~~~iq~ff~~ 134 (286)
T 3lrt_A 58 SDAEVMEMILTLSAIQDYRTKSVNIIAPYYGYARQHQRYKNGEPISSQILTEIYS--SY-SNSIATVDIHDEKTLSYSKV 134 (286)
T ss_dssp SHHHHHHHHHHHHHGGGSCCSEEEEEESSCTTTTCCSCSSTTCCCHHHHHHHHHH--HT-CSEEEEESCSCGGGGGGCSS
T ss_pred CcHHHHHHHHHHHHHHHcCCCEEEEEecCcccccCcccCCCCCcccHHHHHHHHH--HH-hCeEEEecCChHHHhhhcCC
Confidence 45566777655444433 257888864 421 1 1233455554 46 999999973 33332221
Q ss_pred ----HHHHHHHHHHHHhcCccEEEeCCCCCccchHHHHHHHcCCCce
Q 018544 101 ----EPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPI 143 (354)
Q Consensus 101 ----e~~a~aLa~li~~~~P~lVL~g~T~~GrdlaprlAarL~~~lv 143 (354)
..-+..|++.+++.++++ +++-..-|-..+..+|.+|+.|+.
T Consensus 135 pvd~l~~~~~la~~i~~~~~~v-VV~pd~Gg~~~A~~lA~~L~~p~~ 180 (286)
T 3lrt_A 135 KFSDLHANDAIVRYYKNVDVDY-VVSPDDGGLARVADISAKLGKKHF 180 (286)
T ss_dssp EEEEECCHHHHHHHHTTSCCSE-EEESSSSSHHHHHHHHHHHTCEEE
T ss_pred cEEEeecHHHHHHHHHhcCCCE-EEEECCCccHHHHHHHHHhCCCeE
Confidence 112466777777756555 445556688999999999998864
No 140
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=22.32 E-value=2e+02 Score=28.04 Aligned_cols=63 Identities=10% Similarity=-0.040 Sum_probs=39.6
Q ss_pred HHHHHHhhcCCCccEEEEEeCC---CCCCC-----CHHHHHHHHHHHHHhcCccEEEeCCCCCccchHHHHHHHcCCCce
Q 018544 72 EAVKHAASSHPSISQVLVADSD---KFAYP-----IAEPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPI 143 (354)
Q Consensus 72 ~~a~~l~~~~~GaD~V~~~~~~---~l~~~-----~~e~~a~aLa~li~~~~P~lVL~g~T~~GrdlaprlAarL~~~lv 143 (354)
.+++-+. .+|.+-+.+.... .++.. ..... ..+.+++++.+||+++-+ ..+ -.+|.++|+|++
T Consensus 327 ~l~~~L~--elGm~vv~~~~~~~~~~~~~~~~~~v~~~D~-~~le~~i~~~~pDllig~--~~~----~~~a~k~gip~~ 397 (458)
T 3pdi_B 327 GFDALLR--SMGAHTVAAVVPARAAALVDSPLPSVRVGDL-EDLEHAARAGQAQLVIGN--SHA----LASARRLGVPLL 397 (458)
T ss_dssp HHHHHHH--TTTCEEEEEEESSCCSCCTTTTSSCEEESHH-HHHHHHHHHHTCSEEEEC--TTH----HHHHHHTTCCEE
T ss_pred HHHHHHH--HCCCEEEEEEECCCChhhhhCccCcEEeCCH-HHHHHHHHhcCCCEEEEC--hhH----HHHHHHcCCCEE
Confidence 4556665 5899877666432 22221 00122 247788999999999843 333 467889999987
No 141
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=22.08 E-value=3.1e+02 Score=22.48 Aligned_cols=40 Identities=15% Similarity=0.142 Sum_probs=25.9
Q ss_pred CHHHHHHHHHHHHHhcCccEEEe-CCCCCc-cchHHHHHHHc
Q 018544 99 IAEPWAKLVHMIQQREKYSHIIS-ASGSFG-KNVLPRAAALL 138 (354)
Q Consensus 99 ~~e~~a~aLa~li~~~~P~lVL~-g~T~~G-rdlaprlAarL 138 (354)
+.+...++|.++++..+.|+|+. |.+..| +|+-+..-+++
T Consensus 56 d~~~i~~~l~~~~~~~~~DlVittGG~g~g~~D~t~ea~~~~ 97 (169)
T 1y5e_A 56 DKESIQQAVLAGYHKEDVDVVLTNGGTGITKRDVTIEAVSAL 97 (169)
T ss_dssp SHHHHHHHHHHHHTCTTCSEEEEECCCSSSTTCCHHHHHHTT
T ss_pred CHHHHHHHHHHHHhcCCCCEEEEcCCCCCCCCCCcHHHHHHH
Confidence 35677777777776446787776 445555 57777666554
No 142
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=21.86 E-value=2e+02 Score=29.43 Aligned_cols=37 Identities=14% Similarity=0.173 Sum_probs=26.9
Q ss_pred cEEEEEEcCCCCHHHHHHHHhhcCCCccEEEEEeCCCCC
Q 018544 58 SVSMLLAGSGPSFNEAVKHAASSHPSISQVLVADSDKFA 96 (354)
Q Consensus 58 ~V~avv~G~~~~~~~~a~~l~~~~~GaD~V~~~~~~~l~ 96 (354)
.-.++++|.+..-..+++.|+ ..|+-++.++|++..+
T Consensus 326 ~arVLIVGaGGLGs~vA~~La--~aGVG~ItLvD~D~Ve 362 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALI--AWGVRKITFVDNGTVS 362 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHH--HTTCCEEEEECCCBCC
T ss_pred CCeEEEECCCHHHHHHHHHHH--HcCCCEEEEEcCCCCc
Confidence 456778887642345677787 5899999999987643
No 143
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=21.76 E-value=1.4e+02 Score=22.80 Aligned_cols=86 Identities=16% Similarity=0.184 Sum_probs=54.3
Q ss_pred cEEEEeCccCCChhcHHHHHHHHHHhCCeecccHhhHhcCCCCCCceeccCCceeCCceEEEecccchhhhhhccCCCcE
Q 018544 236 RIVVTGGRGLKSAENFKMIEKLAEKLGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKV 315 (354)
Q Consensus 236 ~iVV~~GrG~~~~e~~~~~~~LA~~lga~vG~SRp~vd~gw~p~~~qIGqtG~~V~P~lYia~GISGa~QH~~G~~~s~~ 315 (354)
+|+++.|-|+++-==.+.+++.++..|-.+ -.-++++|-..+++ .+.|+
T Consensus 5 kIll~Cg~G~sTS~l~~k~~~~~~~~gi~~----------------------------~i~a~~~~~~~~~~---~~~Dv 53 (106)
T 1e2b_A 5 HIYLFSSAGMSTSLLVSKMRAQAEKYEVPV----------------------------IIEAFPETLAGEKG---QNADV 53 (106)
T ss_dssp EEEEECSSSTTTHHHHHHHHHHHHHSCCSE----------------------------EEEEECSSSTTHHH---HHCSE
T ss_pred EEEEECCCchhHHHHHHHHHHHHHHCCCCe----------------------------EEEEecHHHHHhhc---cCCCE
Confidence 699999999998522257788887776432 02344444444442 23344
Q ss_pred EEEEcC-------------CCCCCcccccceEEeecHHHHHHHHHhhcccC
Q 018544 316 IVAVNK-------------DADAPIFQVADYGLVGDLFEVIPELLEKFPEK 353 (354)
Q Consensus 316 IVAIN~-------------D~~ApIf~~aDygiVgD~~~vlp~l~~~l~~~ 353 (354)
|+.-.. +-.-|+..--|||- -|-.+++...++.+++.
T Consensus 54 il~~pqv~~~~~~~~~~~~~~~v~vI~~~~yg~-~~g~~vl~~~~~~l~~~ 103 (106)
T 1e2b_A 54 VLLGPQIAYMLPEIQRLLPNKPVEVIDSLLYGK-VDGLGVLKAAVAAIKKA 103 (106)
T ss_dssp EEECTTSGGGHHHHHHHSSSSCCCBCCHHHHTT-TCTTHHHHHHHHHHHSS
T ss_pred EEEccchhhhHHHHHHHhcCCCceEECHHHccC-CCHHHHHHHHHHHHHhc
Confidence 443222 12355577889986 79999999988888754
No 144
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=21.75 E-value=88 Score=30.03 Aligned_cols=10 Identities=30% Similarity=0.763 Sum_probs=6.5
Q ss_pred cccceeEEEE
Q 018544 23 SRSISTLVLG 32 (354)
Q Consensus 23 ~~~~~IlV~~ 32 (354)
|.+|+|+|+.
T Consensus 1 ~~~mkvlviG 10 (431)
T 3mjf_A 1 SNAMNILIIG 10 (431)
T ss_dssp --CEEEEEEE
T ss_pred CCCcEEEEEC
Confidence 3468888886
No 145
>2dfa_A Hypothetical UPF0271 protein TTHB195; lactam utilization protein, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} SCOP: c.6.2.5
Probab=21.57 E-value=92 Score=28.22 Aligned_cols=43 Identities=9% Similarity=0.024 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHhcCccEEEeCCCCCccchHHHHHHHcCCCceeee
Q 018544 101 EPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDV 146 (354)
Q Consensus 101 e~~a~aLa~li~~~~P~lVL~g~T~~GrdlaprlAarL~~~lvtdv 146 (354)
+.+++++.+.++..+|+++|++ ..| ...-+.|.++|.+++..+
T Consensus 122 ~~~A~av~~av~~~d~~L~l~~--l~g-s~~~~~A~~~Gl~~~~E~ 164 (250)
T 2dfa_A 122 RETARAIALAVKAFDPGLPLVV--LPG-TVYEEEARKAGLRVVLEA 164 (250)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEE--CTT-SHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHHHhCCCcEEEe--cCC-hHHHHHHHHcCCcEEEEE
Confidence 5788899999999999999988 223 346688888988887554
No 146
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=21.53 E-value=85 Score=22.57 Aligned_cols=32 Identities=19% Similarity=0.377 Sum_probs=26.1
Q ss_pred CCceEEEecccchhhhhhccCCCcEEEEEcCC
Q 018544 291 APELYMAFGVSGAIQHLAGMRDSKVIVAVNKD 322 (354)
Q Consensus 291 ~P~lYia~GISGa~QH~~G~~~s~~IVAIN~D 322 (354)
.+.++|.-=..|++-+-+|++.-|.|++||.-
T Consensus 27 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~ 58 (90)
T 2eaq_A 27 IPGIFVASVEAGSPAEFSQLQVDDEIIAINNT 58 (90)
T ss_dssp TTEEEEEEECTTSHHHHTTCCTTCEEEEETTE
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCE
Confidence 34567765567889999999999999999974
No 147
>3ga2_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Bacillus subtilis}
Probab=21.43 E-value=53 Score=29.78 Aligned_cols=75 Identities=20% Similarity=0.376 Sum_probs=51.1
Q ss_pred CCcEEEEeCccCCChhcHHHHHHHHHHhC-CeecccHh-hHhcC--CCC-------------CCceecc---CCceeCCc
Q 018544 234 SARIVVTGGRGLKSAENFKMIEKLAEKLG-AAVGATRA-VVDAG--FVP-------------NDLQVGQ---TGKIVAPE 293 (354)
Q Consensus 234 ~A~iVV~~GrG~~~~e~~~~~~~LA~~lg-a~vG~SRp-~vd~g--w~p-------------~~~qIGq---tG~~V~P~ 293 (354)
+-|+++.=|.|+-.+..|.+.--|--.|| -++|+.+- .+-.| +-+ ...+||. |++.++|
T Consensus 109 ~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVAKs~L~~~g~~~~~~~~~~g~~~~l~~~ge~vG~vlRt~~~~kP- 187 (246)
T 3ga2_A 109 EPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIAKTYLKIKGCDFVTPEIEVGAYTDIIIDGEVYGRALRTRRDVKP- 187 (246)
T ss_dssp CCSCEEEEBCSSSSTTSCCHHHHHHHHHTSCEEEEESSCCCCTTCCCCCCCSSTTCEEEEEETTEEEEEEECSSTTSCC-
T ss_pred CCCEEEEcCcEEecCCCcchhheeeeecCCCEEeeeccccccCCccccCccccCCceeeeccCCEEEEEEEEeCCCCCC-
Confidence 46899999999999999988888888888 68998776 33222 211 3445553 5556665
Q ss_pred eEEEec--c--cchhhhhhc
Q 018544 294 LYMAFG--V--SGAIQHLAG 309 (354)
Q Consensus 294 lYia~G--I--SGa~QH~~G 309 (354)
||++.| | .-|.+++--
T Consensus 188 lyVS~Gh~i~l~~A~~~v~~ 207 (246)
T 3ga2_A 188 IFLSCGNYIDLDSSYQITMS 207 (246)
T ss_dssp EEEEEEESSCHHHHHHHHHH
T ss_pred EEEeccCCCCHHHHHHHHHH
Confidence 899988 2 344444443
No 148
>1v6t_A Hypothetical UPF0271 protein PH0986; TIM-barrel, lactam utilization protein, structural genomics; 1.70A {Pyrococcus horikoshii} SCOP: c.6.2.5
Probab=21.14 E-value=96 Score=28.20 Aligned_cols=44 Identities=14% Similarity=0.006 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHhcCccEEEeCCCCCccchHHHHHHHcCCCceeeeE
Q 018544 101 EPWAKLVHMIQQREKYSHIISASGSFGKNVLPRAAALLDVSPITDVI 147 (354)
Q Consensus 101 e~~a~aLa~li~~~~P~lVL~g~T~~GrdlaprlAarL~~~lvtdv~ 147 (354)
+.+++++.+.++..+|+++|++ ..| ...-+.|.++|.+++..+.
T Consensus 122 ~~~A~av~~av~~~d~~L~l~~--l~g-s~~~~~A~~~Gl~~~~E~F 165 (255)
T 1v6t_A 122 EDLARAVIEGILDFDKDLILVT--LSN-SRVADIAEEMGLKVAHEVF 165 (255)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEE--ETT-CHHHHHHHHHTCCEEEEEC
T ss_pred HHHHHHHHHHHHHhCCCcEEEe--cCC-hHHHHHHHHcCCcEEEEEe
Confidence 5788899999999999999988 223 3466888889988876553
No 149
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=21.13 E-value=4e+02 Score=26.05 Aligned_cols=91 Identities=11% Similarity=0.112 Sum_probs=59.1
Q ss_pred HHHHHHHHHHhcCCCCcEEEEE---EcCCCCH---HHHHHHHhhcCCCccEEEEEeCCCCCCCCHHHHHHHHHHHHHhcC
Q 018544 42 QSLSAVEAAKSLSDDNSVSMLL---AGSGPSF---NEAVKHAASSHPSISQVLVADSDKFAYPIAEPWAKLVHMIQQREK 115 (354)
Q Consensus 42 ~slell~~A~~La~~~~V~avv---~G~~~~~---~~~a~~l~~~~~GaD~V~~~~~~~l~~~~~e~~a~aLa~li~~~~ 115 (354)
.-.+.++.|++.+ ..+.+-+ .|+.... -+.++++. .+|+|.+.+.|.- ....|....+.+..+.++.+
T Consensus 128 ni~~~i~~ak~~G--~~v~~~i~~~~~~~~~~e~~~~~a~~l~--~~Gad~I~l~DT~--G~~~P~~v~~lv~~l~~~~~ 201 (464)
T 2nx9_A 128 NMQQALQAVKKMG--AHAQGTLCYTTSPVHNLQTWVDVAQQLA--ELGVDSIALKDMA--GILTPYAAEELVSTLKKQVD 201 (464)
T ss_dssp HHHHHHHHHHHTT--CEEEEEEECCCCTTCCHHHHHHHHHHHH--HTTCSEEEEEETT--SCCCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHCC--CEEEEEEEeeeCCCCCHHHHHHHHHHHH--HCCCCEEEEcCCC--CCcCHHHHHHHHHHHHHhcC
Confidence 3455666777765 4444322 1322112 33566666 4899998888774 45678888888888877765
Q ss_pred ccEEEeCCCCCccchHHHHHHHc
Q 018544 116 YSHIISASGSFGKNVLPRAAALL 138 (354)
Q Consensus 116 P~lVL~g~T~~GrdlaprlAarL 138 (354)
-.+=+=.+...|..+|-.+|+..
T Consensus 202 ~~i~~H~Hnd~GlAvAN~laAv~ 224 (464)
T 2nx9_A 202 VELHLHCHSTAGLADMTLLKAIE 224 (464)
T ss_dssp SCEEEEECCTTSCHHHHHHHHHH
T ss_pred CeEEEEECCCCChHHHHHHHHHH
Confidence 44555567888888888877754
No 150
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=20.99 E-value=65 Score=26.34 Aligned_cols=40 Identities=15% Similarity=0.321 Sum_probs=32.1
Q ss_pred eccCCceeCCceEEEecccchhhhhhccCCCcEEEEEcCC
Q 018544 283 VGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKD 322 (354)
Q Consensus 283 IGqtG~~V~P~lYia~GISGa~QH~~G~~~s~~IVAIN~D 322 (354)
+|.+-+.....+||.-=..|++-+.+|++.-|.|++||--
T Consensus 18 lG~~~~~~~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~ 57 (166)
T 1w9e_A 18 IGLRLKSIDNGIFVQLVQANSPASLVGLRFGDQVLQINGE 57 (166)
T ss_dssp CSEEEEEETTEEEEEEECTTSHHHHTTCCTTCEEEEETTE
T ss_pred EeEEEEeCCCCEEEEEECCCChHHHcCCCCCCEEEEECCE
Confidence 4554444556788887788999999999999999999964
No 151
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=20.97 E-value=3.4e+02 Score=25.60 Aligned_cols=63 Identities=14% Similarity=0.164 Sum_probs=44.1
Q ss_pred HHHHHHhhcCCCccEEEEEeCCCCCCCCHHHHHHHHHHHHHhcCc----cEEEeCCCCCccchHHHHHHHc
Q 018544 72 EAVKHAASSHPSISQVLVADSDKFAYPIAEPWAKLVHMIQQREKY----SHIISASGSFGKNVLPRAAALL 138 (354)
Q Consensus 72 ~~a~~l~~~~~GaD~V~~~~~~~l~~~~~e~~a~aLa~li~~~~P----~lVL~g~T~~GrdlaprlAarL 138 (354)
++++.+. .+|+|.+.+.|. .....|..+.+.+..+.+.... .+=+=.+...|.-+|--+|+..
T Consensus 161 ~~~~~~~--~~Ga~~i~l~DT--~G~~~P~~~~~lv~~l~~~~~~~~~~~l~~H~Hnd~GlAvAN~laAv~ 227 (370)
T 3rmj_A 161 EICGAVI--EAGATTINIPDT--VGYSIPYKTEEFFRELIAKTPNGGKVVWSAHCHNDLGLAVANSLAALK 227 (370)
T ss_dssp HHHHHHH--HHTCCEEEEECS--SSCCCHHHHHHHHHHHHHHSTTGGGSEEEEECBCTTSCHHHHHHHHHH
T ss_pred HHHHHHH--HcCCCEEEecCc--cCCcCHHHHHHHHHHHHHhCCCcCceEEEEEeCCCCChHHHHHHHHHH
Confidence 3455555 479998888776 4556788888888888776542 2334466788888888777754
No 152
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=20.71 E-value=2.3e+02 Score=23.74 Aligned_cols=60 Identities=8% Similarity=-0.064 Sum_probs=36.2
Q ss_pred HHHHHhhcCCCccEEEEEeCCCCCCCCHHHHHHHHHHHHHhcCccEEEe-CCCCCc-cchHHHHHHHc
Q 018544 73 AVKHAASSHPSISQVLVADSDKFAYPIAEPWAKLVHMIQQREKYSHIIS-ASGSFG-KNVLPRAAALL 138 (354)
Q Consensus 73 ~a~~l~~~~~GaD~V~~~~~~~l~~~~~e~~a~aLa~li~~~~P~lVL~-g~T~~G-rdlaprlAarL 138 (354)
+++.+. .+|.+-+...--+ -+.+...++|.+++++.+.|+|++ |.+..| +|+-+..-..+
T Consensus 45 L~~~l~--~~G~~v~~~~iv~----Dd~~~I~~al~~a~~~~~~DlVittGG~s~g~~D~t~eal~~~ 106 (178)
T 2pjk_A 45 IKQLLI--ENGHKIIGYSLVP----DDKIKILKAFTDALSIDEVDVIISTGGTGYSPTDITVETIRKL 106 (178)
T ss_dssp HHHHHH--HTTCEEEEEEEEC----SCHHHHHHHHHHHHTCTTCCEEEEESCCSSSTTCCHHHHHGGG
T ss_pred HHHHHH--HCCCEEEEEEEeC----CCHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcchHHHHHHH
Confidence 344444 3677644322111 136778888888876545888776 455555 68888766665
No 153
>3fj1_A Putative phosphosugar isomerase; YP_167080.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 1.75A {Silicibacter pomeroyi dss-3}
Probab=20.63 E-value=1.8e+02 Score=27.09 Aligned_cols=96 Identities=22% Similarity=0.236 Sum_probs=56.9
Q ss_pred CCCcEEEEeCccCCChhcHHHHHHHHHH-hCCeecccHhhHhcCCCCCCceeccCCceeCCceEEEecccchhhhhhcc-
Q 018544 233 GSARIVVTGGRGLKSAENFKMIEKLAEK-LGAAVGATRAVVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGM- 310 (354)
Q Consensus 233 ~~A~iVV~~GrG~~~~e~~~~~~~LA~~-lga~vG~SRp~vd~gw~p~~~qIGqtG~~V~P~lYia~GISGa~QH~~G~- 310 (354)
.+++.|+-.|.|-..--. ..++.+-+. +|-.+-+.-|-...-+ .....-+.+|.|++--||-...+.-.
T Consensus 41 ~~~~~I~i~G~G~S~~aa-~~~~~~l~~~~g~~~~~~~~~~~~~~--------~~~~~~~~dlvI~iS~SG~T~e~l~a~ 111 (344)
T 3fj1_A 41 RDPSFVATVARGSSDHVC-TYLSYAAELLLGLPVASLGPSVASVY--------DARLRLDRALCLAVSQSGKSPDIVAMT 111 (344)
T ss_dssp HCCSEEEEECCTHHHHHH-HHHHHHHHHHHCCCEEECCTHHHHTT--------CCCCCCTTEEEEEEESSSCCHHHHHHH
T ss_pred CCCCEEEEEEechHHHHH-HHHHHHHHHHhCCcEEEecchHHhhh--------cccCCCCCcEEEEEcCCCCCHHHHHHH
Confidence 678999999999432111 122222332 4543332222222222 11233466899999999966533221
Q ss_pred -----CCCcEEEEEcCCCCCCcccccceEEeec
Q 018544 311 -----RDSKVIVAVNKDADAPIFQVADYGLVGD 338 (354)
Q Consensus 311 -----~~s~~IVAIN~D~~ApIf~~aDygiVgD 338 (354)
++++ +|+|=++++.|+-+.||+.+.-.
T Consensus 112 ~~ak~~Ga~-~iaIT~~~~S~La~~ad~~l~~~ 143 (344)
T 3fj1_A 112 RNAGRDGAL-CVALTNDAASPLAGVSAHTIDIH 143 (344)
T ss_dssp HHHHHTTCE-EEEEESCTTSHHHHTSSEEEECC
T ss_pred HHHHHCCCc-EEEEECCCCChHHHhcCEeeecC
Confidence 2443 77898899999999999998754
No 154
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.55 E-value=69 Score=23.43 Aligned_cols=31 Identities=23% Similarity=0.277 Sum_probs=25.8
Q ss_pred CceEEEecccchhhhhhccCCCcEEEEEcCC
Q 018544 292 PELYMAFGVSGAIQHLAGMRDSKVIVAVNKD 322 (354)
Q Consensus 292 P~lYia~GISGa~QH~~G~~~s~~IVAIN~D 322 (354)
..++|.-=..|.+-+.+|++.-|.|++||--
T Consensus 32 ~~v~V~~V~~~spA~~aGl~~GD~I~~ing~ 62 (94)
T 2eeg_A 32 APLTISRVHAGSKAALAALCPGDLIQAINGE 62 (94)
T ss_dssp SCCEECCCCSSSHHHHTTCCTTCEEEEETTE
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCE
Confidence 3466666668889999999999999999973
No 155
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4
Probab=20.51 E-value=1.1e+02 Score=24.57 Aligned_cols=40 Identities=13% Similarity=0.180 Sum_probs=25.3
Q ss_pred HHHHHHHHHhcCccEEEeCCCCCc---c----chHHHHHHHcCCCce
Q 018544 104 AKLVHMIQQREKYSHIISASGSFG---K----NVLPRAAALLDVSPI 143 (354)
Q Consensus 104 a~aLa~li~~~~P~lVL~g~T~~G---r----dlaprlAarL~~~lv 143 (354)
++.|.+.+++.++|+|++|....+ + .++-++.....+|++
T Consensus 113 ~~~I~~~a~~~~~DLIVmG~~g~~~~~~~~~Gsva~~vl~~a~~pVl 159 (175)
T 2gm3_A 113 KDVICQEVKRVRPDFLVVGSRGLGRFQKVFVGTVSAFCVKHAECPVM 159 (175)
T ss_dssp HHHHHHHHHHHCCSEEEEEECCCC--------CHHHHHHHHCSSCEE
T ss_pred HHHHHHHHHHhCCCEEEEeCCCCChhhhhhcCchHHHHHhCCCCCEE
Confidence 567778888889999999875433 1 334455555554443
No 156
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=20.49 E-value=94 Score=22.31 Aligned_cols=29 Identities=17% Similarity=0.367 Sum_probs=25.7
Q ss_pred eEEEecccchhhhhhc-cCCCcEEEEEcCC
Q 018544 294 LYMAFGVSGAIQHLAG-MRDSKVIVAVNKD 322 (354)
Q Consensus 294 lYia~GISGa~QH~~G-~~~s~~IVAIN~D 322 (354)
+||.-=..|++-+-+| ++--|.|++||.-
T Consensus 29 ~~V~~V~~~spA~~aG~L~~GD~I~~ing~ 58 (90)
T 2q9v_A 29 IYIGHIVPLGAADTDGRLRSGDELISVDGT 58 (90)
T ss_dssp EEEEEECTTSHHHHHCCCCTTCEEEEETTE
T ss_pred EEEEEECCCChHHHCCCCCCCCEEEEECCE
Confidence 7777767899999999 9999999999963
No 157
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=20.09 E-value=82 Score=22.87 Aligned_cols=36 Identities=11% Similarity=0.327 Sum_probs=29.7
Q ss_pred CceeCCceEEEecccchhhhhhc-cCCCcEEEEEcCC
Q 018544 287 GKIVAPELYMAFGVSGAIQHLAG-MRDSKVIVAVNKD 322 (354)
Q Consensus 287 G~~V~P~lYia~GISGa~QH~~G-~~~s~~IVAIN~D 322 (354)
|-.+...+||.-=..|..-+.+| ++--|.|++||..
T Consensus 16 G~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~ 52 (88)
T 3e17_A 16 GLRLGSQIFVKEMTRTGLATKDGNLHEGDIILKINGT 52 (88)
T ss_dssp CEEEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTE
T ss_pred CEEEeCCEEEEEECCCCHHHHcCCCCCCCEEEEECCE
Confidence 44444578888778899999999 9999999999974
Done!