Query 018547
Match_columns 354
No_of_seqs 298 out of 2132
Neff 6.6
Searched_HMMs 46136
Date Fri Mar 29 09:55:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018547.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018547hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0372 Serine/threonine speci 100.0 6.7E-84 1.4E-88 587.9 18.2 286 14-305 2-288 (303)
2 KOG0374 Serine/threonine speci 100.0 8.5E-79 1.8E-83 590.2 26.6 293 10-302 4-303 (331)
3 PTZ00480 serine/threonine-prot 100.0 1.2E-76 2.6E-81 573.3 32.0 292 14-305 10-304 (320)
4 KOG0373 Serine/threonine speci 100.0 2.6E-77 5.7E-82 537.4 18.3 288 12-305 3-292 (306)
5 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 3E-75 6.5E-80 559.7 29.2 288 15-302 2-292 (293)
6 PTZ00244 serine/threonine-prot 100.0 4.1E-75 8.9E-80 558.5 29.6 289 13-301 2-293 (294)
7 cd07420 MPP_RdgC Drosophila me 100.0 2.6E-74 5.6E-79 557.7 31.9 283 11-299 3-320 (321)
8 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 4E-74 8.6E-79 550.0 30.0 283 15-303 2-285 (285)
9 PTZ00239 serine/threonine prot 100.0 2.1E-73 4.5E-78 548.5 31.5 285 15-305 3-289 (303)
10 smart00156 PP2Ac Protein phosp 100.0 2.4E-72 5.3E-77 534.8 30.1 270 33-302 1-270 (271)
11 cd07417 MPP_PP5_C PP5, C-termi 100.0 4.1E-72 8.8E-77 542.6 30.2 291 9-305 10-307 (316)
12 cd07416 MPP_PP2B PP2B, metallo 100.0 8.8E-72 1.9E-76 538.6 32.1 285 15-305 3-300 (305)
13 cd07419 MPP_Bsu1_C Arabidopsis 100.0 3.6E-70 7.8E-75 529.1 29.5 284 18-301 1-311 (311)
14 cd07418 MPP_PP7 PP7, metalloph 100.0 3.9E-67 8.5E-72 515.2 31.5 293 9-302 6-366 (377)
15 KOG0371 Serine/threonine prote 100.0 1.4E-67 3.1E-72 483.7 14.8 288 13-306 18-306 (319)
16 KOG0375 Serine-threonine phosp 100.0 4.9E-66 1.1E-70 491.0 12.2 262 31-292 59-333 (517)
17 KOG0377 Protein serine/threoni 100.0 1E-54 2.3E-59 421.9 16.9 284 11-300 117-430 (631)
18 KOG0376 Serine-threonine phosp 100.0 5.6E-50 1.2E-54 396.0 14.7 273 32-305 182-461 (476)
19 cd00144 MPP_PPP_family phospho 100.0 3.7E-36 8.1E-41 276.3 21.0 214 63-287 1-224 (225)
20 PRK13625 bis(5'-nucleosyl)-tet 99.9 8.3E-26 1.8E-30 212.3 17.5 121 60-182 1-145 (245)
21 cd07425 MPP_Shelphs Shewanella 99.9 1.1E-25 2.3E-30 206.8 16.4 174 63-271 1-195 (208)
22 cd07423 MPP_PrpE Bacillus subt 99.9 1.6E-23 3.4E-28 195.4 19.8 120 60-182 1-142 (234)
23 cd07413 MPP_PA3087 Pseudomonas 99.9 1.1E-23 2.4E-28 195.2 16.2 115 63-180 2-143 (222)
24 PRK00166 apaH diadenosine tetr 99.9 4.4E-23 9.6E-28 196.9 16.9 121 60-184 1-128 (275)
25 cd07422 MPP_ApaH Escherichia c 99.9 7.7E-24 1.7E-28 200.3 11.5 119 62-184 1-126 (257)
26 TIGR00668 apaH bis(5'-nucleosy 99.9 3.9E-23 8.5E-28 196.5 13.6 121 60-184 1-128 (279)
27 PRK11439 pphA serine/threonine 99.9 1.4E-22 3.1E-27 187.2 13.7 115 60-180 17-146 (218)
28 PHA02239 putative protein phos 99.9 4.6E-22 1E-26 186.0 15.5 137 60-212 1-184 (235)
29 cd07424 MPP_PrpA_PrpB PrpA and 99.9 5.6E-22 1.2E-26 181.5 15.5 169 60-259 1-184 (207)
30 cd07421 MPP_Rhilphs Rhilph pho 99.9 1.6E-21 3.4E-26 186.2 14.7 148 61-213 3-243 (304)
31 PRK09968 serine/threonine-spec 99.8 1E-20 2.2E-25 175.0 10.7 115 60-180 15-144 (218)
32 PF00149 Metallophos: Calcineu 99.5 1.2E-12 2.6E-17 109.7 12.7 159 60-254 1-199 (200)
33 COG0639 ApaH Diadenosine tetra 99.2 2.4E-11 5.3E-16 102.1 7.2 144 133-277 3-155 (155)
34 cd00841 MPP_YfcE Escherichia c 99.2 4.5E-10 9.7E-15 97.4 14.7 83 61-180 1-86 (155)
35 PF12850 Metallophos_2: Calcin 99.2 3.9E-10 8.4E-15 96.9 12.4 137 60-272 1-137 (156)
36 TIGR00040 yfcE phosphoesterase 99.1 1.7E-09 3.7E-14 94.6 14.4 63 60-131 1-64 (158)
37 PRK09453 phosphodiesterase; Pr 99.0 7.1E-10 1.5E-14 99.4 9.1 69 60-132 1-77 (182)
38 cd07379 MPP_239FB Homo sapiens 99.0 4.1E-09 8.9E-14 89.8 10.0 118 61-259 1-120 (135)
39 cd07397 MPP_DevT Myxococcus xa 98.8 2.8E-08 6.2E-13 93.2 11.2 156 61-255 2-208 (238)
40 cd00838 MPP_superfamily metall 98.8 4.5E-08 9.7E-13 79.9 11.0 118 63-260 1-120 (131)
41 cd07392 MPP_PAE1087 Pyrobaculu 98.7 1.2E-07 2.7E-12 83.7 11.7 66 62-133 1-67 (188)
42 cd07404 MPP_MS158 Microscilla 98.6 9E-08 1.9E-12 84.1 8.1 67 62-131 1-68 (166)
43 cd07394 MPP_Vps29 Homo sapiens 98.6 2E-06 4.4E-11 77.2 15.7 125 61-272 1-134 (178)
44 cd07403 MPP_TTHA0053 Thermus t 98.6 6.6E-07 1.4E-11 76.1 10.9 107 63-259 1-107 (129)
45 PRK05340 UDP-2,3-diacylglucosa 98.6 1.3E-06 2.7E-11 81.9 13.7 205 60-291 1-231 (241)
46 cd07388 MPP_Tt1561 Thermus the 98.6 1.8E-07 3.9E-12 87.2 7.7 71 60-131 5-75 (224)
47 cd07400 MPP_YydB Bacillus subt 98.5 3E-06 6.5E-11 72.3 12.1 118 62-260 1-130 (144)
48 TIGR01854 lipid_A_lpxH UDP-2,3 98.4 1.9E-06 4E-11 80.3 10.6 205 62-291 1-229 (231)
49 cd07399 MPP_YvnB Bacillus subt 98.3 3.2E-05 7E-10 71.2 16.5 194 61-301 2-213 (214)
50 TIGR03729 acc_ester putative p 98.3 6.2E-06 1.3E-10 77.0 11.5 68 61-131 1-74 (239)
51 COG0622 Predicted phosphoester 98.2 3.9E-05 8.5E-10 68.8 14.5 160 60-301 2-165 (172)
52 PRK11148 cyclic 3',5'-adenosin 98.0 0.00023 4.9E-09 67.9 16.3 70 60-131 15-98 (275)
53 PRK11340 phosphodiesterase Yae 98.0 1.3E-05 2.8E-10 76.6 6.9 70 60-131 50-125 (271)
54 cd07383 MPP_Dcr2 Saccharomyces 98.0 0.00021 4.6E-09 64.7 14.4 70 60-129 3-87 (199)
55 cd07385 MPP_YkuE_C Bacillus su 97.9 1.6E-05 3.5E-10 72.6 6.3 71 60-132 2-77 (223)
56 cd07395 MPP_CSTP1 Homo sapiens 97.9 0.00059 1.3E-08 64.3 16.2 71 61-131 6-99 (262)
57 KOG0376 Serine-threonine phosp 97.8 4E-06 8.6E-11 84.7 0.2 243 31-277 13-299 (476)
58 cd07393 MPP_DR1119 Deinococcus 97.8 0.00046 9.9E-09 64.3 12.9 46 231-278 181-229 (232)
59 cd07396 MPP_Nbla03831 Homo sap 97.7 0.00011 2.4E-09 69.8 7.6 73 61-133 2-88 (267)
60 PHA02546 47 endonuclease subun 97.6 0.00014 3.1E-09 71.7 6.9 72 60-131 1-89 (340)
61 COG1409 Icc Predicted phosphoh 97.6 0.0021 4.6E-08 60.2 14.5 74 60-135 1-82 (301)
62 cd07402 MPP_GpdQ Enterobacter 97.5 0.00033 7.1E-09 64.7 7.7 69 61-131 1-83 (240)
63 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.5 0.00024 5.1E-09 67.9 6.6 71 62-132 1-87 (262)
64 cd07391 MPP_PF1019 Pyrococcus 97.5 0.00032 7E-09 62.2 7.1 58 75-132 30-89 (172)
65 COG2129 Predicted phosphoester 97.5 0.02 4.2E-07 53.3 18.6 205 59-291 3-217 (226)
66 TIGR00619 sbcd exonuclease Sbc 97.5 0.00026 5.5E-09 67.1 6.5 73 60-132 1-89 (253)
67 cd07398 MPP_YbbF-LpxH Escheric 97.4 0.00042 9E-09 63.0 7.3 29 231-259 177-205 (217)
68 cd08165 MPP_MPPE1 human MPPE1 97.4 0.0015 3.2E-08 57.4 10.0 47 86-132 38-90 (156)
69 cd00840 MPP_Mre11_N Mre11 nucl 97.3 0.00041 8.8E-09 63.0 6.2 73 61-133 1-91 (223)
70 PRK04036 DNA polymerase II sma 97.3 0.00053 1.1E-08 71.3 7.2 113 59-179 243-388 (504)
71 COG2908 Uncharacterized protei 97.3 0.0013 2.8E-08 61.5 8.6 197 64-293 2-229 (237)
72 PRK10966 exonuclease subunit S 97.2 0.00067 1.4E-08 68.7 7.1 72 60-132 1-88 (407)
73 TIGR00024 SbcD_rel_arch putati 97.2 0.0011 2.3E-08 62.0 7.5 72 60-132 15-103 (225)
74 PF06874 FBPase_2: Firmicute f 97.2 0.006 1.3E-07 64.0 13.6 72 231-304 507-588 (640)
75 cd07390 MPP_AQ1575 Aquifex aeo 97.1 0.00082 1.8E-08 59.4 5.7 67 62-133 1-84 (168)
76 TIGR00583 mre11 DNA repair pro 97.1 0.0013 2.9E-08 66.5 7.6 74 59-132 3-124 (405)
77 cd07401 MPP_TMEM62_N Homo sapi 96.6 0.0041 8.8E-08 58.9 6.2 28 235-262 190-217 (256)
78 cd00839 MPP_PAPs purple acid p 96.5 0.0074 1.6E-07 57.5 6.9 70 60-133 5-83 (294)
79 cd07386 MPP_DNA_pol_II_small_a 96.3 0.011 2.4E-07 55.3 6.8 70 63-132 2-95 (243)
80 cd08163 MPP_Cdc1 Saccharomyces 96.3 0.23 5.1E-06 47.2 15.8 31 230-262 203-233 (257)
81 cd07384 MPP_Cdc1_like Saccharo 96.2 0.0096 2.1E-07 53.1 5.7 47 86-132 45-101 (171)
82 COG1408 Predicted phosphohydro 96.1 0.012 2.7E-07 56.8 6.4 71 60-132 45-119 (284)
83 cd08166 MPP_Cdc1_like_1 unchar 96.0 0.013 2.8E-07 53.6 5.5 46 86-131 42-93 (195)
84 cd07380 MPP_CWF19_N Schizosacc 95.9 0.015 3.2E-07 51.1 5.5 119 63-254 1-121 (150)
85 COG4186 Predicted phosphoester 95.9 0.015 3.4E-07 51.2 5.4 71 61-135 5-90 (186)
86 cd00845 MPP_UshA_N_like Escher 95.7 0.021 4.5E-07 53.3 6.0 66 61-131 2-82 (252)
87 COG0420 SbcD DNA repair exonuc 95.5 0.036 7.9E-07 55.4 7.3 75 60-134 1-91 (390)
88 COG1311 HYS2 Archaeal DNA poly 95.3 0.36 7.7E-06 49.6 13.3 195 61-291 227-461 (481)
89 cd08164 MPP_Ted1 Saccharomyces 94.9 0.05 1.1E-06 49.7 5.6 65 67-131 24-111 (193)
90 PF14582 Metallophos_3: Metall 94.2 0.046 1E-06 51.1 3.7 73 60-132 6-103 (255)
91 PLN02533 probable purple acid 93.9 0.075 1.6E-06 54.2 4.9 71 59-132 139-212 (427)
92 COG1407 Predicted ICC-like pho 93.7 0.19 4.1E-06 47.3 6.8 73 59-134 19-113 (235)
93 cd07410 MPP_CpdB_N Escherichia 93.4 0.094 2E-06 49.9 4.4 66 61-131 2-95 (277)
94 cd07378 MPP_ACP5 Homo sapiens 93.3 0.17 3.7E-06 47.7 5.8 70 61-131 2-83 (277)
95 cd07387 MPP_PolD2_C PolD2 (DNA 93.1 4.5 9.6E-05 38.7 15.2 45 246-295 206-253 (257)
96 cd07408 MPP_SA0022_N Staphyloc 91.7 0.24 5.2E-06 46.7 4.6 66 61-131 2-82 (257)
97 KOG2863 RNA lariat debranching 90.8 0.53 1.1E-05 46.8 6.0 73 60-132 1-89 (456)
98 KOG3662 Cell division control 90.7 0.45 9.7E-06 48.2 5.6 56 75-130 81-143 (410)
99 KOG3325 Membrane coat complex 90.3 9.8 0.00021 33.6 12.6 116 62-260 3-124 (183)
100 cd00842 MPP_ASMase acid sphing 89.3 0.69 1.5E-05 44.2 5.5 62 73-134 53-125 (296)
101 COG1768 Predicted phosphohydro 89.3 0.66 1.4E-05 42.1 4.8 74 85-169 42-117 (230)
102 PF08321 PPP5: PPP5 TPR repeat 89.0 1.2 2.7E-05 36.0 5.9 46 8-58 50-95 (95)
103 cd07412 MPP_YhcR_N Bacillus su 89.0 0.66 1.4E-05 44.6 5.1 66 61-131 2-88 (288)
104 cd07411 MPP_SoxB_N Thermus the 88.0 0.79 1.7E-05 43.4 4.9 64 62-131 3-95 (264)
105 KOG0918 Selenium-binding prote 87.8 0.023 5E-07 56.8 -5.8 193 87-291 48-250 (476)
106 KOG3339 Predicted glycosyltran 85.2 8.7 0.00019 35.1 9.6 85 88-177 40-140 (211)
107 PRK09419 bifunctional 2',3'-cy 83.7 1.2 2.6E-05 51.1 4.4 65 61-130 662-735 (1163)
108 TIGR00282 metallophosphoestera 83.2 2.6 5.6E-05 40.5 5.8 68 60-132 1-72 (266)
109 cd07409 MPP_CD73_N CD73 ecto-5 82.4 2.4 5.1E-05 40.6 5.3 66 61-131 2-94 (281)
110 PF04042 DNA_pol_E_B: DNA poly 80.5 2.7 5.9E-05 38.0 4.7 72 62-133 1-93 (209)
111 cd07406 MPP_CG11883_N Drosophi 78.8 3.4 7.3E-05 39.0 4.9 56 70-130 21-82 (257)
112 cd07405 MPP_UshA_N Escherichia 76.9 3.1 6.8E-05 40.0 4.1 66 61-131 2-87 (285)
113 KOG1432 Predicted DNA repair e 76.4 4.2 9.1E-05 40.4 4.9 71 61-132 55-148 (379)
114 cd07407 MPP_YHR202W_N Saccharo 74.6 3.4 7.3E-05 39.9 3.7 66 61-131 7-97 (282)
115 COG0737 UshA 5'-nucleotidase/2 73.3 3.9 8.5E-05 42.6 4.1 69 59-132 26-116 (517)
116 KOG2476 Uncharacterized conser 72.0 6.8 0.00015 40.3 5.2 69 59-128 5-75 (528)
117 PF14164 YqzH: YqzH-like prote 71.9 12 0.00027 28.1 5.3 45 10-54 1-47 (64)
118 cd08162 MPP_PhoA_N Synechococc 69.0 6.7 0.00015 38.3 4.4 65 62-131 3-91 (313)
119 cd07382 MPP_DR1281 Deinococcus 65.6 15 0.00033 34.9 6.0 66 61-131 1-70 (255)
120 PTZ00235 DNA polymerase epsilo 63.7 23 0.0005 34.5 6.8 73 60-132 28-123 (291)
121 PRK09420 cpdB bifunctional 2', 62.6 9.5 0.00021 41.2 4.4 69 58-131 24-122 (649)
122 PRK09558 ushA bifunctional UDP 62.4 11 0.00025 39.5 4.9 68 59-131 34-121 (551)
123 PTZ00422 glideosome-associated 62.2 14 0.00029 37.6 5.2 72 60-131 27-109 (394)
124 TIGR01390 CycNucDiestase 2',3' 61.0 9.9 0.00021 40.9 4.2 67 60-131 3-99 (626)
125 PRK09419 bifunctional 2',3'-cy 60.0 9.9 0.00021 43.8 4.2 23 232-254 256-279 (1163)
126 COG3855 Fbp Uncharacterized pr 59.7 5.4 0.00012 41.1 1.8 41 88-133 192-232 (648)
127 KOG3947 Phosphoesterases [Gene 56.7 18 0.00039 35.0 4.7 93 32-132 25-127 (305)
128 PRK11907 bifunctional 2',3'-cy 49.1 21 0.00046 39.6 4.4 67 60-131 116-213 (814)
129 TIGR01530 nadN NAD pyrophospha 48.9 28 0.0006 36.8 5.1 41 86-131 49-94 (550)
130 PF10083 DUF2321: Uncharacteri 39.3 9.3 0.0002 33.7 -0.2 47 228-280 20-75 (158)
131 PF15007 CEP44: Centrosomal sp 38.5 20 0.00042 30.9 1.7 83 67-165 1-87 (131)
132 PF02875 Mur_ligase_C: Mur lig 33.6 1.2E+02 0.0025 23.4 5.4 72 57-128 9-82 (91)
133 PRK09418 bifunctional 2',3'-cy 32.9 51 0.0011 36.5 4.1 67 59-130 39-141 (780)
134 PF06874 FBPase_2: Firmicute f 32.1 39 0.00084 36.3 3.0 42 89-135 187-228 (640)
135 PF13258 DUF4049: Domain of un 30.7 1.6E+02 0.0034 28.2 6.3 58 118-182 127-187 (318)
136 PF12641 Flavodoxin_3: Flavodo 30.1 2E+02 0.0044 25.2 6.9 102 63-183 2-116 (160)
137 COG4320 Uncharacterized protei 29.8 1.1E+02 0.0024 30.4 5.4 60 48-115 45-108 (410)
138 KOG1378 Purple acid phosphatas 29.7 94 0.002 32.2 5.2 34 233-266 322-355 (452)
139 smart00854 PGA_cap Bacterial c 27.6 1.1E+02 0.0023 28.3 4.9 40 235-276 197-236 (239)
140 PRK02135 hypothetical protein; 24.8 3.4E+02 0.0074 25.1 7.4 72 9-84 77-171 (201)
141 PRK10773 murF UDP-N-acetylmura 23.7 4.4E+02 0.0094 26.8 8.9 67 59-126 324-392 (453)
142 TIGR00282 metallophosphoestera 21.4 68 0.0015 30.8 2.3 39 89-131 2-41 (266)
143 PF09637 Med18: Med18 protein; 21.0 1.2E+02 0.0025 28.7 3.8 38 231-271 139-176 (250)
No 1
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-84 Score=587.89 Aligned_cols=286 Identities=48% Similarity=0.939 Sum_probs=276.2
Q ss_pred HHHHHHHHHHccCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEeCCCCCHHHHHHHHHhCCCCCCCcEEee
Q 018547 14 VLDDIIRRLLEGRGGKQVQLSESEIRQLCVNARQIFLSQPNLVEVEAPIRICGDVHGQYQDLLRLFEHGGYPPTANYLFL 93 (354)
Q Consensus 14 ~~~~~i~~~~~~~~~~~~~l~~~~i~~l~~~a~~il~~ep~vl~l~~~i~ViGDIHG~~~~L~~il~~~g~~~~~~~vfL 93 (354)
+++.+|+++.+. ..+.++++..||.+++++|.+|++|+.++.|++|+||||||++||..+|+..|-+++++|+||
T Consensus 2 dldr~ie~L~~~-----~li~E~eV~~LC~~~~eiL~~E~NV~~i~tPvtvcGDIHGQf~Dllelf~igG~~~~t~YLFL 76 (303)
T KOG0372|consen 2 DLDRQIEQLRRC-----ELIAESEVKALCAKVREILVEESNVQRIDTPVTVCGDIHGQFYDLLELFRIGGDVPETNYLFL 76 (303)
T ss_pred cHHHHHHHHHhc-----CCCcHHHHHHHHHHHHHHHhcCCCceecCCCcEEeecccchHHHHHHHHHhCCCCCCCceEee
Confidence 477888888764 367899999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCchhhhhHhhhCChHHHHHHHh-HHhHHHHhhhhhcCCceEEEcceE
Q 018547 94 GDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFN-VRLWKIFTDCFNCLPVAALINEKI 172 (354)
Q Consensus 94 GDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~i~~~~gf~~e~~~~~~-~~~~~~~~~~f~~LPlaaii~~~i 172 (354)
|||||||.+|+|++.+|++||++||++|++||||||++.++..|||++||.+||+ ..+|+.+.+.|+.||++|+|++++
T Consensus 77 GDyVDRG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~~~vWr~c~eiFdyL~l~aiid~ki 156 (303)
T KOG0372|consen 77 GDYVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSANVWRYCTEIFDYLSLAAIIDGKI 156 (303)
T ss_pred cchhccccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCChHHHHHHHHHHHhhhHhheecCcE
Confidence 9999999999999999999999999999999999999999999999999999995 789999999999999999999999
Q ss_pred EEecCCCCCCCCCHHHhhccCCCCCCCCCCcccccccCCCCCCCCCcccCCCCcceecChHHHHHHHHhCCCceEEEeee
Q 018547 173 LCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQ 252 (354)
Q Consensus 173 l~vHgGisp~~~~l~~i~~i~Rp~~~~~~~~~~dlLWsDP~~~~~~~~~~~rg~g~~fG~~~~~~fL~~~~l~~IIRgHq 252 (354)
||||||+||.+.++|||+.+.|..++|+.+.++|+|||||++ ..+|.-++||+|+.||.+++++||+.||+++|+|+||
T Consensus 157 fCVHGGlSP~i~~lDqIr~lDR~~Eiph~g~m~DllWSDPee-~~g~~~SPRGaGylFG~dvv~~F~~~N~~~~I~RaHQ 235 (303)
T KOG0372|consen 157 FCVHGGLSPSIQTLDQIRVLDRKQEVPHDGAMCDLLWSDPEE-GPGWGLSPRGAGYLFGEDVVESFLEANGLSLICRAHQ 235 (303)
T ss_pred EEEcCCCCcchhhHHHHHHhhccccCCCCCcchheeccCccc-CCCcccCCCCccccccHHHHHHHHHhCChHHHHHHHH
Confidence 999999999999999999999999999999999999999985 4799999999999999999999999999999999999
Q ss_pred eecCCeEEecCCeEEEEeeCCCCCCCCCCceeEEEecCCceeEEEEecCCCCC
Q 018547 253 VVEDGYEFFARRRLVTIFSAPNYGGEFDNAGALLSVNESLVCSFEILKPADKS 305 (354)
Q Consensus 253 ~v~~G~~~~~~~~~iTvfSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~ 305 (354)
.+.+||++.++++++|||||||||+.++|.||+|.++++....|.+|+.++..
T Consensus 236 Lv~eGyk~~F~~~v~TVWSAPNYCYrCGN~AsIl~lde~~~~~F~vFeaa~~~ 288 (303)
T KOG0372|consen 236 LVMEGYKWHFDEKVVTVWSAPNYCYRCGNVAAILELDEDLDKDFRVFEAAPQE 288 (303)
T ss_pred HHHhhHHHhcCCceEEEecCCchhhhcCChHHheeeccccCcceEeeecchhh
Confidence 99999999999999999999999999999999999999999999999987654
No 2
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=8.5e-79 Score=590.24 Aligned_cols=293 Identities=69% Similarity=1.213 Sum_probs=281.5
Q ss_pred CChHHHHHHHHHHHccC---CCc--cccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEeCCCCCHHHHHHHHHhCC-
Q 018547 10 MDKVVLDDIIRRLLEGR---GGK--QVQLSESEIRQLCVNARQIFLSQPNLVEVEAPIRICGDVHGQYQDLLRLFEHGG- 83 (354)
Q Consensus 10 ~~~~~~~~~i~~~~~~~---~~~--~~~l~~~~i~~l~~~a~~il~~ep~vl~l~~~i~ViGDIHG~~~~L~~il~~~g- 83 (354)
+....++++|.+++... ..+ +..++++++.+||..+.++|.++|+++++++||.|+||||||+.||.++|+..|
T Consensus 4 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~ei~~l~~~~~~if~~~~~l~e~~aPV~i~GDiHGq~~DLlrlf~~~g~ 83 (331)
T KOG0374|consen 4 MASLDLDELIRKLLSVGNKKTEKKRQVPLSKSEIIKLCDKAREIFLSQPTLLELSAPVKIVGDIHGQFGDLLRLFDLLGS 83 (331)
T ss_pred cchhhHHHHHHHHhhccccCCCcccceeccHHHHHHHHHHHHHHhcCCCceeecCCCEEEEccCcCCHHHHHHHHHhcCC
Confidence 44566788888888762 222 456999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcEEeecCcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCchhhhhHhhhCChHHHHHHHh-HHhHHHHhhhhhcC
Q 018547 84 YPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFN-VRLWKIFTDCFNCL 162 (354)
Q Consensus 84 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~i~~~~gf~~e~~~~~~-~~~~~~~~~~f~~L 162 (354)
+|++++|||||||||||++|+|++.+|+++|++||++|++||||||++.++..|||++||.++|+ ..+|+.|++.|+.|
T Consensus 84 ~pp~~~ylFLGDYVDRG~~slE~i~LL~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~~~~w~~F~~~f~~m 163 (331)
T KOG0374|consen 84 FPPDQNYVFLGDYVDRGKQSLETICLLFALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGEIKLWKAFNDAFNCL 163 (331)
T ss_pred CCCcccEEEecccccCCccceEEeehhhhhhhhCCceEEEeccccccccccceeeeHHHHHHhcchHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999999999999999998 69999999999999
Q ss_pred CceEEEcceEEEecCCCCCCCCCHHHhhccCCCCCCCCCCcccccccCCCCCCCCCcccCCCCcceecChHHHHHHHHhC
Q 018547 163 PVAALINEKILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKN 242 (354)
Q Consensus 163 Plaaii~~~il~vHgGisp~~~~l~~i~~i~Rp~~~~~~~~~~dlLWsDP~~~~~~~~~~~rg~g~~fG~~~~~~fL~~~ 242 (354)
|++|+|+++++|+|||++|.+.++++|+.|.||.+.++.++++|++||||+....+|.+|.||.++.||++++++||+++
T Consensus 164 p~~a~i~~kI~CmhGGlsp~l~~~~~i~~i~rp~~~~~~gll~DLlWsdp~~~~~g~~~n~Rg~s~~fg~~~v~~f~~~~ 243 (331)
T KOG0374|consen 164 PLAALIDGKILCMHGGLSPHLKSLDQIRAIPRPTDSPDKGLLCDLLWSDPDDDVPGWEENDRGVSFTFGPAVVEDFCKKL 243 (331)
T ss_pred chhheecceEEEecCCCChhhcChHHHhhccCCcCCCccceeeeeeecCCCCCCCCcccCCCceeeEecHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999988899999999999999999999999999
Q ss_pred CCceEEEeeeeecCCeEEecCCeEEEEeeCCCCCCCCCCceeEEEecCCceeEEEEecCC
Q 018547 243 DLDLICRGHQVVEDGYEFFARRRLVTIFSAPNYGGEFDNAGALLSVNESLVCSFEILKPA 302 (354)
Q Consensus 243 ~l~~IIRgHq~v~~G~~~~~~~~~iTvfSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~ 302 (354)
++++||||||++++||+++++++++||||||+||+.++|+||+|.+|+++.|+|++++|.
T Consensus 244 ~ldlivRaHqvv~dGyeffa~r~lvTIFSAP~Ycg~~~n~gavm~Vd~~l~~sf~~l~p~ 303 (331)
T KOG0374|consen 244 DLDLIVRAHQVVEDGYEFFAGRKLVTIFSAPNYCGEFDNAGAVMRVDKNLKCSFVILRPE 303 (331)
T ss_pred CcceEEEcCccccccceEecCceEEEEecCchhccccCCceEEEEECCCCeEEEEEeccc
Confidence 999999999999999999999999999999999999999999999999999999999995
No 3
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=1.2e-76 Score=573.29 Aligned_cols=292 Identities=73% Similarity=1.335 Sum_probs=281.3
Q ss_pred HHHHHHHHHHccC---CCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEeCCCCCHHHHHHHHHhCCCCCCCcE
Q 018547 14 VLDDIIRRLLEGR---GGKQVQLSESEIRQLCVNARQIFLSQPNLVEVEAPIRICGDVHGQYQDLLRLFEHGGYPPTANY 90 (354)
Q Consensus 14 ~~~~~i~~~~~~~---~~~~~~l~~~~i~~l~~~a~~il~~ep~vl~l~~~i~ViGDIHG~~~~L~~il~~~g~~~~~~~ 90 (354)
+++++|+++++.+ +++...++++++.+||++|+++|++||++++++.|++||||||||+.+|.++|+..++++.++|
T Consensus 10 ~~~~~i~~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~ep~ll~i~~~i~vvGDIHG~~~dL~~l~~~~g~~~~~~y 89 (320)
T PTZ00480 10 DVDNIIERLLSVRGSKPGKNVNLTEAEVRGLCIKARDIFISQPILLELEAPLKICGDVHGQYFDLLRLFEYGGYPPESNY 89 (320)
T ss_pred CHHHHHHHHHhccccCccccCCCCHHHHHHHHHHHHHHHHhCCceEecCCCeEEEeecccCHHHHHHHHHhcCCCCcceE
Confidence 3888999999763 3455679999999999999999999999999999999999999999999999999999999999
Q ss_pred EeecCcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCchhhhhHhhhCChHHHHHHHhHHhHHHHhhhhhcCCceEEEcc
Q 018547 91 LFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALINE 170 (354)
Q Consensus 91 vfLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~i~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaaii~~ 170 (354)
||||||||||++|+|++.+++++|+.+|.++++||||||...++..|||..||..+|+..+|..++++|++||+||+|++
T Consensus 90 lfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y~~~l~~~~~~~F~~LPlaAiI~~ 169 (320)
T PTZ00480 90 LFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYTIKLWKTFTDCFNCLPVAALIDE 169 (320)
T ss_pred EEeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhcCHHHHHHHHHHHHhccHhheecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEecCCCCCCCCCHHHhhccCCCCCCCCCCcccccccCCCCCCCCCcccCCCCcceecChHHHHHHHHhCCCceEEEe
Q 018547 171 KILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRG 250 (354)
Q Consensus 171 ~il~vHgGisp~~~~l~~i~~i~Rp~~~~~~~~~~dlLWsDP~~~~~~~~~~~rg~g~~fG~~~~~~fL~~~~l~~IIRg 250 (354)
++|||||||+|.+.++++|+.+.||.+.++.++++|+|||||.....+|.+|+||.|+.||++++++||++||+++||||
T Consensus 170 ~i~cvHGGI~p~~~~l~~i~~i~rp~~~~~~~~~~dllWSDP~~~~~~~~~s~RG~g~~FG~~~~~~Fl~~n~l~~IiR~ 249 (320)
T PTZ00480 170 KILCMHGGLSPELSNLEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWADNERGVSYVFSQEIVQVFLKKHELDLICRA 249 (320)
T ss_pred cEEEEcCCcCcccCCHHHHhcccCCCCCCccchhhheeecCcccccCCCccCCCCCccccCHHHHHHHHHhCCCcEEEEc
Confidence 99999999999999999999999999999999999999999998778999999999999999999999999999999999
Q ss_pred eeeecCCeEEecCCeEEEEeeCCCCCCCCCCceeEEEecCCceeEEEEecCCCCC
Q 018547 251 HQVVEDGYEFFARRRLVTIFSAPNYGGEFDNAGALLSVNESLVCSFEILKPADKS 305 (354)
Q Consensus 251 Hq~v~~G~~~~~~~~~iTvfSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~ 305 (354)
||++++||+++++++|+|||||||||+..+|+||++.|++++.++|++++|.+..
T Consensus 250 Hq~v~~G~~~~~~~~~iTvFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~ 304 (320)
T PTZ00480 250 HQVVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGSMMTIDESLMCSFQILKPAEQG 304 (320)
T ss_pred CccccCceEEeCCCcEEEEeCCcccCCCCCccEEEEEECCCCcEeEEEecCCccc
Confidence 9999999999999999999999999999999999999999999999999988765
No 4
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-77 Score=537.45 Aligned_cols=288 Identities=45% Similarity=0.903 Sum_probs=277.1
Q ss_pred hHHHHHHHHHHHccCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEeCCCCCHHHHHHHHHhCCCCCCCcEE
Q 018547 12 KVVLDDIIRRLLEGRGGKQVQLSESEIRQLCVNARQIFLSQPNLVEVEAPIRICGDVHGQYQDLLRLFEHGGYPPTANYL 91 (354)
Q Consensus 12 ~~~~~~~i~~~~~~~~~~~~~l~~~~i~~l~~~a~~il~~ep~vl~l~~~i~ViGDIHG~~~~L~~il~~~g~~~~~~~v 91 (354)
+.++++.|+.+.+. -.|+++|+..||+-++++|..|.++..++.|+.|+|||||||.||+++|+..|--|+++|+
T Consensus 3 ~~d~d~wi~~vk~c-----kyLpE~elk~LCe~v~d~L~eEsNvqPV~tPVTvCGDIHGQFyDL~eLFrtgG~vP~tnYi 77 (306)
T KOG0373|consen 3 KMDLDQWIETVKKC-----KYLPENELKRLCEMVKDILMEESNVQPVSTPVTVCGDIHGQFYDLLELFRTGGQVPDTNYI 77 (306)
T ss_pred cCCHHHHHHHHHHc-----CCCCHHHHHHHHHHHHHHHhhhcCccccCCCeeEeeccchhHHHHHHHHHhcCCCCCcceE
Confidence 44688888888544 3789999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCchhhhhHhhhCChHHHHHHHh-HHhHHHHhhhhhcCCceEEEcc
Q 018547 92 FLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFN-VRLWKIFTDCFNCLPVAALINE 170 (354)
Q Consensus 92 fLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~i~~~~gf~~e~~~~~~-~~~~~~~~~~f~~LPlaaii~~ 170 (354)
|+|||||||..|+|++.+|+.||.+||.++.+||||||++.+...|||++||..+|+ ...|+.+.++|+.|++||+|++
T Consensus 78 FmGDfVDRGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGnan~wkycckVFD~LtlaAiID~ 157 (306)
T KOG0373|consen 78 FMGDFVDRGYYSLETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNANVWKYCCKVFDFLTLAAIIDE 157 (306)
T ss_pred EeccccccccccHHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCchHHHHHHHHHhhhhHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999995 6899999999999999999999
Q ss_pred eEEEecCCCCCCCCCHHHhhccCCCCCCCCCCcccccccCCCCCCCCCcccCCCCcceecChHHHHHHHHhCCCceEEEe
Q 018547 171 KILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRG 250 (354)
Q Consensus 171 ~il~vHgGisp~~~~l~~i~~i~Rp~~~~~~~~~~dlLWsDP~~~~~~~~~~~rg~g~~fG~~~~~~fL~~~~l~~IIRg 250 (354)
+++|||||+||++.++|||+-+.|..++|+++.+||++||||+ +++.|.-++||+|+.||.+++++|..-|++++|+|+
T Consensus 158 ~vLCVHGGLSPdirtlDqir~i~R~qEiPh~G~fcDlmWSDPe-dve~W~vSpRGAGwlFGskVt~eF~~iN~L~LicRa 236 (306)
T KOG0373|consen 158 KVLCVHGGLSPDIRTLDQIRLIERNQEIPHEGPFCDLMWSDPE-DVETWAVSPRGAGWLFGSKVTTEFNHINNLNLICRA 236 (306)
T ss_pred cEEEEcCCCCccceeHHHHHhHHhhccCCCCCCccceeccChh-hhhhheeCCCCcceeechhhhHHHHhccchHHHHhH
Confidence 9999999999999999999999999999999999999999998 589999999999999999999999999999999999
Q ss_pred eeeecCCeEEecCCe-EEEEeeCCCCCCCCCCceeEEEecCCceeEEEEecCCCCC
Q 018547 251 HQVVEDGYEFFARRR-LVTIFSAPNYGGEFDNAGALLSVNESLVCSFEILKPADKS 305 (354)
Q Consensus 251 Hq~v~~G~~~~~~~~-~iTvfSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~ 305 (354)
||.|++||++.+++| ++|||||||||+.++|.|++|++++++..++++|...+..
T Consensus 237 HQLV~EG~KymF~eK~lvTVWSAPNYCYRCGNvAsi~~~d~~~~r~~k~F~avpd~ 292 (306)
T KOG0373|consen 237 HQLVQEGFKYMFDEKGLVTVWSAPNYCYRCGNVASIMSFDDNLERETKIFSAVPDN 292 (306)
T ss_pred HHHHHhhHHhccCCCCEEEEecCCchhhhccCeeeEEEecccCCccceeeeecCCc
Confidence 999999999998888 9999999999999999999999999999999999987765
No 5
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=3e-75 Score=559.67 Aligned_cols=288 Identities=76% Similarity=1.376 Sum_probs=277.6
Q ss_pred HHHHHHHHHccC---CCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEeCCCCCHHHHHHHHHhCCCCCCCcEE
Q 018547 15 LDDIIRRLLEGR---GGKQVQLSESEIRQLCVNARQIFLSQPNLVEVEAPIRICGDVHGQYQDLLRLFEHGGYPPTANYL 91 (354)
Q Consensus 15 ~~~~i~~~~~~~---~~~~~~l~~~~i~~l~~~a~~il~~ep~vl~l~~~i~ViGDIHG~~~~L~~il~~~g~~~~~~~v 91 (354)
++++|+++++.+ .+....++++++.+||++|+++|++||++++++.|++||||||||+.+|.++|+..++++.++||
T Consensus 2 ~~~~i~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~l~~~~~~~~~~~~l 81 (293)
T cd07414 2 IDSIIERLLEVRGSRPGKNVQLTEAEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 81 (293)
T ss_pred HHHHHHHHHhccccCCcccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCceEEEEecCCCHHHHHHHHHhcCCCCcceEE
Confidence 577888888763 35567899999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCchhhhhHhhhCChHHHHHHHhHHhHHHHhhhhhcCCceEEEcce
Q 018547 92 FLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALINEK 171 (354)
Q Consensus 92 fLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~i~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaaii~~~ 171 (354)
|||||||||++|+|++.+++++|+.+|.++++||||||.+.++..|||.+|+..+|+..+|..+.++|++||++|+++++
T Consensus 82 fLGDyVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~~~l~~~~~~~f~~lPlaa~i~~~ 161 (293)
T cd07414 82 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIIDEK 161 (293)
T ss_pred EEeeEecCCCCcHHHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhhhHHHHHHHHHHHHHhHHHHhhCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCCCCHHHhhccCCCCCCCCCCcccccccCCCCCCCCCcccCCCCcceecChHHHHHHHHhCCCceEEEee
Q 018547 172 ILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGH 251 (354)
Q Consensus 172 il~vHgGisp~~~~l~~i~~i~Rp~~~~~~~~~~dlLWsDP~~~~~~~~~~~rg~g~~fG~~~~~~fL~~~~l~~IIRgH 251 (354)
++|||||++|.+.++++|+.+.||.+.++.++++|+|||||.....+|.+|+||.|+.||++++++||++||+++|||||
T Consensus 162 i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~H 241 (293)
T cd07414 162 IFCMHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGKDVVAKFLNKHDLDLICRAH 241 (293)
T ss_pred EEEEccCCCcccCcHHHHhcccCCCCCCchhhHhhhhccCcccccCCCccCCCCcceecCHHHHHHHHHHcCCeEEEECC
Confidence 99999999999999999999999999999999999999999988889999999999999999999999999999999999
Q ss_pred eeecCCeEEecCCeEEEEeeCCCCCCCCCCceeEEEecCCceeEEEEecCC
Q 018547 252 QVVEDGYEFFARRRLVTIFSAPNYGGEFDNAGALLSVNESLVCSFEILKPA 302 (354)
Q Consensus 252 q~v~~G~~~~~~~~~iTvfSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~ 302 (354)
|++++||+++++++|+|||||||||+..+|+||++.+++++.++|++++|.
T Consensus 242 e~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~~~~~~~~ 292 (293)
T cd07414 242 QVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 292 (293)
T ss_pred ccccCeEEEeCCCcEEEEecCCcccCCCCceEEEEEECCCCcEEEEEecCC
Confidence 999999999999999999999999999999999999999999999999875
No 6
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=4.1e-75 Score=558.47 Aligned_cols=289 Identities=56% Similarity=1.082 Sum_probs=276.6
Q ss_pred HHHHHHHHHHHccC---CCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEeCCCCCHHHHHHHHHhCCCCCCCc
Q 018547 13 VVLDDIIRRLLEGR---GGKQVQLSESEIRQLCVNARQIFLSQPNLVEVEAPIRICGDVHGQYQDLLRLFEHGGYPPTAN 89 (354)
Q Consensus 13 ~~~~~~i~~~~~~~---~~~~~~l~~~~i~~l~~~a~~il~~ep~vl~l~~~i~ViGDIHG~~~~L~~il~~~g~~~~~~ 89 (354)
+.++++|.++++.. .+....++++++.+||++++++|++||++++++.|++||||||||+.+|.++|+..++++.++
T Consensus 2 ~~~~~~i~~~~~~~~~~~~~~~~i~~~~i~~l~~~~~~il~~e~~ll~i~~p~~ViGDIHG~~~~L~~l~~~~~~~~~~~ 81 (294)
T PTZ00244 2 SLVQTLIEKMLTVKGNRTQRQILIREEDIRAVLTEVREIFMSQPMLLEIRPPVRVCGDTHGQYYDLLRIFEKCGFPPYSN 81 (294)
T ss_pred chHHHHHHHHHhcccCCCccccCCCHHHHHHHHHHHHHHHHhCCCeEeccCCceeeccCCCCHHHHHHHHHHcCCCCccc
Confidence 45788888988863 234557999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCchhhhhHhhhCChHHHHHHHhHHhHHHHhhhhhcCCceEEEc
Q 018547 90 YLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIN 169 (354)
Q Consensus 90 ~vfLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~i~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaaii~ 169 (354)
|||||||||||++|+||+.+++++|+.+|.+++++|||||.+.++..|||.+++..+|+..+|+.+.++|++||++|+++
T Consensus 82 ~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~~~l~~~~~~~f~~lPlaaii~ 161 (294)
T PTZ00244 82 YLFLGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYNIKLFKAFTDVFNTMPVCCVIS 161 (294)
T ss_pred EEEeeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHhhHHHHHHHHHHHHhCchheEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEecCCCCCCCCCHHHhhccCCCCCCCCCCcccccccCCCCCCCCCcccCCCCcceecChHHHHHHHHhCCCceEEE
Q 018547 170 EKILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICR 249 (354)
Q Consensus 170 ~~il~vHgGisp~~~~l~~i~~i~Rp~~~~~~~~~~dlLWsDP~~~~~~~~~~~rg~g~~fG~~~~~~fL~~~~l~~IIR 249 (354)
++++|||||++|.+.++++++.++||.+.++.++++|+|||||.....+|.+++||.|+.||++++++||++||+++|||
T Consensus 162 ~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR 241 (294)
T PTZ00244 162 EKIICMHGGLSPDLTSLASVNEIERPCDVPDRGILCDLLWADPEDEVRGFLESDRGVSYLFGEDIVNDFLDMVDMDLIVR 241 (294)
T ss_pred CeeEEEcCCCCchhhHHHHhhhhccccCCCccchhheeeecCcccccCCCCcCCCCCccccCHHHHHHHHHHcCCcEEEE
Confidence 99999999999999999999999999999999999999999999877899999999999999999999999999999999
Q ss_pred eeeeecCCeEEecCCeEEEEeeCCCCCCCCCCceeEEEecCCceeEEEEecC
Q 018547 250 GHQVVEDGYEFFARRRLVTIFSAPNYGGEFDNAGALLSVNESLVCSFEILKP 301 (354)
Q Consensus 250 gHq~v~~G~~~~~~~~~iTvfSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p 301 (354)
|||++++||+++++++|+|||||||||+..+|+||+|.|++++.++|++++.
T Consensus 242 ~Hq~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~f~~~~~ 293 (294)
T PTZ00244 242 AHQVMERGYGFFASRQLVTVFSAPNYCGEFDNDAAVMNIDDKLQCSFLIIPA 293 (294)
T ss_pred cCccccCceEEcCCCeEEEEeCCccccCCCCceEEEEEECCCCcEeEEEeec
Confidence 9999999999999999999999999999999999999999999999998765
No 7
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=2.6e-74 Score=557.70 Aligned_cols=283 Identities=37% Similarity=0.666 Sum_probs=260.2
Q ss_pred ChHHHHHHHHHHHccCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecC----cEEEEeCCCCCHHHHHHHHHhCCCCC
Q 018547 11 DKVVLDDIIRRLLEGRGGKQVQLSESEIRQLCVNARQIFLSQPNLVEVEA----PIRICGDVHGQYQDLLRLFEHGGYPP 86 (354)
Q Consensus 11 ~~~~~~~~i~~~~~~~~~~~~~l~~~~i~~l~~~a~~il~~ep~vl~l~~----~i~ViGDIHG~~~~L~~il~~~g~~~ 86 (354)
+.+.++.+|+++.+. ..|+++++.+||++|+++|++||++++++. |++||||||||+.+|.++|+..|+++
T Consensus 3 ~~~~~~~~i~~~~~~-----~~l~~~~i~~L~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~~~g~~~ 77 (321)
T cd07420 3 TKDHIDALIEAFKEK-----QLLHAKYVLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKNGLPS 77 (321)
T ss_pred CHHHHHHHHHHHHcc-----CCCCHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHHHcCCCC
Confidence 567789999999763 268899999999999999999999999976 89999999999999999999999985
Q ss_pred -CCcEEeecCcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCchhhhhHhhhCChHHHHHHHh---HHhHHHHhhhhhcC
Q 018547 87 -TANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFN---VRLWKIFTDCFNCL 162 (354)
Q Consensus 87 -~~~~vfLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~i~~~~gf~~e~~~~~~---~~~~~~~~~~f~~L 162 (354)
.++|||||||||||++|+||+.+|++||+.+|+++++||||||.+.++..|||.+||..+|+ ..+|+.+.++|++|
T Consensus 78 ~~~~~lFLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~~~~l~~~~~~~F~~L 157 (321)
T cd07420 78 PENPYVFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLHGKKILRLLEDVFSWL 157 (321)
T ss_pred ccceEEEeccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCccHHHHHHHHHHHHHhC
Confidence 46799999999999999999999999999999999999999999999999999999999996 78999999999999
Q ss_pred CceEEEcceEEEecCCCCCCCCCHHHhhccCCCCC-----CCC----------------------CCcccccccCCCCCC
Q 018547 163 PVAALINEKILCMHGGLSPELENLDQIRNISRPTD-----IPD----------------------NGLLCDLLWSDPDAN 215 (354)
Q Consensus 163 Plaaii~~~il~vHgGisp~~~~l~~i~~i~Rp~~-----~~~----------------------~~~~~dlLWsDP~~~ 215 (354)
|+||++++++|||||||+| ..++++|+.++|+.. +|. .+++.|+|||||.+.
T Consensus 158 Plaaii~~~i~cvHGGi~~-~~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlLWSDP~~~ 236 (321)
T cd07420 158 PLATIIDNKILVVHGGISD-STDLDLLDKIDRHKYVSVLRPPLRKGMEELTGEEEDPSEPLDKTEWRQILDILWSDPKAQ 236 (321)
T ss_pred CceEEEcCCEEEEeCCCCC-ccCHHHHHhhhccccccccCCCccccccccccccccccccccccccchhheeeecCCccC
Confidence 9999999999999999997 578999999988421 111 146789999999866
Q ss_pred CCCcccCCCCcceecChHHHHHHHHhCCCceEEEeeeeecCCeEEecCCeEEEEeeCCCCCCCCCCceeEEEecCCceeE
Q 018547 216 IEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVVEDGYEFFARRRLVTIFSAPNYGGEFDNAGALLSVNESLVCS 295 (354)
Q Consensus 216 ~~~~~~~~rg~g~~fG~~~~~~fL~~~~l~~IIRgHq~v~~G~~~~~~~~~iTvfSa~~Y~~~~~N~ga~l~i~~~~~~~ 295 (354)
...|.+++||.|+.||++++++||++|++++||||||++++||++.++++|+|||||||||+..+|+||+|.+++++.++
T Consensus 237 ~~~~~~~~RG~g~~FG~~~~~~Fl~~n~l~~IIR~He~v~~G~~~~~~~~~iTvFSa~nY~~~~~N~gavl~i~~~~~~~ 316 (321)
T cd07420 237 KGCKPNTFRGGGCYFGPDVTSKVLQKHGLSLLIRSHECKPEGYEFCHNNKVITIFSASNYYEEGSNRGAYIKLGPDLTPH 316 (321)
T ss_pred CCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhhcceEEecCCeEEEEecCCccCCCCCccEEEEEECCCCcee
Confidence 55577789999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred EEEe
Q 018547 296 FEIL 299 (354)
Q Consensus 296 ~~~~ 299 (354)
|+++
T Consensus 317 f~~~ 320 (321)
T cd07420 317 FVQY 320 (321)
T ss_pred EEEe
Confidence 8875
No 8
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=4e-74 Score=549.98 Aligned_cols=283 Identities=51% Similarity=0.980 Sum_probs=271.7
Q ss_pred HHHHHHHHHccCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEeCCCCCHHHHHHHHHhCCCCCCCcEEeec
Q 018547 15 LDDIIRRLLEGRGGKQVQLSESEIRQLCVNARQIFLSQPNLVEVEAPIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLG 94 (354)
Q Consensus 15 ~~~~i~~~~~~~~~~~~~l~~~~i~~l~~~a~~il~~ep~vl~l~~~i~ViGDIHG~~~~L~~il~~~g~~~~~~~vfLG 94 (354)
++++|+++++. ..++++++.+||++|+++|++||++++++.|++||||||||+.+|.++|+..++++.++|||||
T Consensus 2 ~~~~~~~~~~~-----~~l~~~~~~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~lfLG 76 (285)
T cd07415 2 LDKWIEQLKKC-----ELLPESEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELFRVGGDPPDTNYLFLG 76 (285)
T ss_pred HHHHHHHHHcc-----CCCCHHHHHHHHHHHHHHHHhCCCEEecCCCEEEEEeCCCCHHHHHHHHHHcCCCCCCeEEEEe
Confidence 57788888753 2689999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCchhhhhHhhhCChHHHHHHHh-HHhHHHHhhhhhcCCceEEEcceEE
Q 018547 95 DYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFN-VRLWKIFTDCFNCLPVAALINEKIL 173 (354)
Q Consensus 95 DyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~i~~~~gf~~e~~~~~~-~~~~~~~~~~f~~LPlaaii~~~il 173 (354)
||||||++|+|++.+++++|+.+|.++++||||||.+.++..|||.+||..+|+ ..+|+.+.++|++||++|+++++++
T Consensus 77 DyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~~~l~~~~~~~f~~lPlaaii~~~i~ 156 (285)
T cd07415 77 DYVDRGYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGNANVWKYCTDLFDYLPLAALIDNQIF 156 (285)
T ss_pred EECCCCcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCchHHHHHHHHHHHHhHHHhEeCCeEE
Confidence 999999999999999999999999999999999999999999999999999997 4899999999999999999999999
Q ss_pred EecCCCCCCCCCHHHhhccCCCCCCCCCCcccccccCCCCCCCCCcccCCCCcceecChHHHHHHHHhCCCceEEEeeee
Q 018547 174 CMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQV 253 (354)
Q Consensus 174 ~vHgGisp~~~~l~~i~~i~Rp~~~~~~~~~~dlLWsDP~~~~~~~~~~~rg~g~~fG~~~~~~fL~~~~l~~IIRgHq~ 253 (354)
|||||++|.+.++++|+.++||.+.+..+++.|+|||||... .+|.+|+||.|+.||++++++||++||+++||||||+
T Consensus 157 cvHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~-~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~ 235 (285)
T cd07415 157 CVHGGLSPSIDTLDQIRAIDRFQEVPHEGPMCDLLWSDPDDI-EGWGISPRGAGYLFGQDVVEEFNHNNGLTLICRAHQL 235 (285)
T ss_pred EEcCCCCCCcccHHHhhcccCCCCCCCCCCccceEecCCCcc-CCCCcCCCCCccccCHHHHHHHHHHCCCeEEEEcCcc
Confidence 999999999999999999999999999999999999999864 7899999999999999999999999999999999999
Q ss_pred ecCCeEEecCCeEEEEeeCCCCCCCCCCceeEEEecCCceeEEEEecCCC
Q 018547 254 VEDGYEFFARRRLVTIFSAPNYGGEFDNAGALLSVNESLVCSFEILKPAD 303 (354)
Q Consensus 254 v~~G~~~~~~~~~iTvfSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~ 303 (354)
+++||++.++++|+|||||||||+..+|+||+|.+++++.++|.+++|.+
T Consensus 236 ~~~G~~~~~~~~~~TvfSa~~y~~~~~n~~a~l~i~~~~~~~~~~~~~~~ 285 (285)
T cd07415 236 VMEGYQWMFDDKLVTVWSAPNYCYRCGNVASIMELDEHLKRSFKVFEAAP 285 (285)
T ss_pred ccceEEEecCCcEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeccCC
Confidence 99999999999999999999999999999999999999999999999863
No 9
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=2.1e-73 Score=548.51 Aligned_cols=285 Identities=46% Similarity=0.932 Sum_probs=271.4
Q ss_pred HHHHHHHHHccCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEeCCCCCHHHHHHHHHhCCCCCCCcEEeec
Q 018547 15 LDDIIRRLLEGRGGKQVQLSESEIRQLCVNARQIFLSQPNLVEVEAPIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLG 94 (354)
Q Consensus 15 ~~~~i~~~~~~~~~~~~~l~~~~i~~l~~~a~~il~~ep~vl~l~~~i~ViGDIHG~~~~L~~il~~~g~~~~~~~vfLG 94 (354)
++++|+++.+. ..++++++.+||++|+++|++||++++++.|++|+||||||+.+|.++|+..+.++.++|||||
T Consensus 3 ~~~~~~~~~~~-----~~l~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~~L~~l~~~~~~~~~~~~lfLG 77 (303)
T PTZ00239 3 IDRHIATLLNG-----GCLPERDLKLICERAKEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKEGGDIPNANYIFIG 77 (303)
T ss_pred HHHHHHHHHcc-----CCCCHHHHHHHHHHHHHHHHhCCCeEecCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEee
Confidence 67888888753 2688999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCchhhhhHhhhCChHHHHHHHhH-HhHHHHhhhhhcCCceEEEcceEE
Q 018547 95 DYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFNV-RLWKIFTDCFNCLPVAALINEKIL 173 (354)
Q Consensus 95 DyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~i~~~~gf~~e~~~~~~~-~~~~~~~~~f~~LPlaaii~~~il 173 (354)
||||||++|+|++.+++++|+.+|.++++||||||.+.++..|||.+|+.++|+. .+|+.+.++|++||++|+++++++
T Consensus 78 DyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~~~~~~~~~~f~~LPlaaii~~~i~ 157 (303)
T PTZ00239 78 DFVDRGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNSNPWRLFMDVFDCLPLAALIEGQIL 157 (303)
T ss_pred eEcCCCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcChhHHHHHHHHHHhCchheEEcCeEE
Confidence 9999999999999999999999999999999999999999999999999999964 799999999999999999999999
Q ss_pred EecCCCCCCCCCHHHhhccCCCCCCCCCCcccccccCCCCCCCCCcccCCCCcceecChHHHHHHHHhCCCceEEEeeee
Q 018547 174 CMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQV 253 (354)
Q Consensus 174 ~vHgGisp~~~~l~~i~~i~Rp~~~~~~~~~~dlLWsDP~~~~~~~~~~~rg~g~~fG~~~~~~fL~~~~l~~IIRgHq~ 253 (354)
|||||++|.++++++|+.+.||.+.|.++.++|+|||||.. ..+|.+|+||.|+.||++++++||++||+++||||||+
T Consensus 158 cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~-~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~ 236 (303)
T PTZ00239 158 CVHGGLSPDMRTIDQIRTIDRKIEIPHEGPFCDLMWSDPEE-VEYWAVNSRGAGYLFGAKVTKEFCRLNDLTLICRAHQL 236 (303)
T ss_pred EEcCccCcccccHhhhccccCCCCCCCCCCceeeEecCccc-cCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChh
Confidence 99999999999999999999999999999999999999984 57899999999999999999999999999999999999
Q ss_pred ecCCeEEecC-CeEEEEeeCCCCCCCCCCceeEEEecCCceeEEEEecCCCCC
Q 018547 254 VEDGYEFFAR-RRLVTIFSAPNYGGEFDNAGALLSVNESLVCSFEILKPADKS 305 (354)
Q Consensus 254 v~~G~~~~~~-~~~iTvfSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~ 305 (354)
+++||++.++ ++|+|||||||||+..+|+||++.+++++.++|+.|+|.+.+
T Consensus 237 ~~~G~~~~~~~~~~iTvfSa~~Y~~~~~N~~ail~i~~~~~~~~~~~~~~~~~ 289 (303)
T PTZ00239 237 VMEGYKYWFPDQNLVTVWSAPNYCYRCGNIASILCLDENLQQTWKTFKEVPES 289 (303)
T ss_pred hccceEEEeCCCeEEEEECCCcccCCCCceEEEEEECCCCcEeeEEeeCCCcc
Confidence 9999998765 459999999999999999999999999999999999998765
No 10
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=2.4e-72 Score=534.78 Aligned_cols=270 Identities=58% Similarity=1.055 Sum_probs=263.1
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEeCCCCCHHHHHHHHHhCCCCCCCcEEeecCcccCCCCcHHHHHHHHH
Q 018547 33 LSESEIRQLCVNARQIFLSQPNLVEVEAPIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLA 112 (354)
Q Consensus 33 l~~~~i~~l~~~a~~il~~ep~vl~l~~~i~ViGDIHG~~~~L~~il~~~g~~~~~~~vfLGDyVDRG~~s~evl~ll~~ 112 (354)
++++++.+||++|+++|++||+++++++|++||||||||+.+|.++|+..+.++.+++||||||||||++|+|++.++++
T Consensus 1 ~~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~e~l~~l~~ 80 (271)
T smart00156 1 LYAEEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSIEVILLLFA 80 (271)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCeEEeCCCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCcEEEeCCCchhhhhHhhhCChHHHHHHHhHHhHHHHhhhhhcCCceEEEcceEEEecCCCCCCCCCHHHhhcc
Q 018547 113 YKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALINEKILCMHGGLSPELENLDQIRNI 192 (354)
Q Consensus 113 Lk~~~p~~v~lLrGNHE~~~i~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaaii~~~il~vHgGisp~~~~l~~i~~i 192 (354)
+|+.+|.++++||||||.+.++..|||.+|+..+|+.++|+.+.++|++||++|+++++++|||||++|.+.++++|+++
T Consensus 81 lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~~~~l~~i~~i 160 (271)
T smart00156 81 LKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYGEEIYEKFQEAFSWLPLAALIDNKILCMHGGLSPDLTTLDDIRKL 160 (271)
T ss_pred HHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcCHHHHHHHHHHHhhChhheEEcCeEEEEecCCCCccCCHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcccccccCCCCCCCCCcccCCCCcceecChHHHHHHHHhCCCceEEEeeeeecCCeEEecCCeEEEEeeC
Q 018547 193 SRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVVEDGYEFFARRRLVTIFSA 272 (354)
Q Consensus 193 ~Rp~~~~~~~~~~dlLWsDP~~~~~~~~~~~rg~g~~fG~~~~~~fL~~~~l~~IIRgHq~v~~G~~~~~~~~~iTvfSa 272 (354)
.||.+.++.++++|+|||||.....+|.+|+||.|+.||++++++||++||+++||||||++++||+++++++|+|||||
T Consensus 161 ~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa 240 (271)
T smart00156 161 KRPQEPPDEGLLIDLLWSDPDQPVDGFQPSIRGASYYFGPDAVDEFLKKNNLKLIIRAHQVVDDGYEFFHDRKLVTIFSA 240 (271)
T ss_pred cCCCCCCchhhhhheeecCCCcccCCCccCCCCCccccCHHHHHHHHHHCCCeEEEecCcccCCcEEEecCCcEEEEECC
Confidence 99999999999999999999877789999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCceeEEEecCCceeEEEEecCC
Q 018547 273 PNYGGEFDNAGALLSVNESLVCSFEILKPA 302 (354)
Q Consensus 273 ~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~ 302 (354)
||||+..+|+||++.++++..++|.+++|.
T Consensus 241 ~~y~~~~~n~~a~~~i~~~~~~~~~~~~~~ 270 (271)
T smart00156 241 PNYCGRFGNKAAVLKVDKDLKLSFEQFKPG 270 (271)
T ss_pred cccccCCCceEEEEEECCCCcEEEEEecCC
Confidence 999999999999999999999999999875
No 11
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=4.1e-72 Score=542.63 Aligned_cols=291 Identities=41% Similarity=0.792 Sum_probs=274.4
Q ss_pred CCChHHHHHHHHHHHccCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCc----EEEEeCCCCCHHHHHHHHHhCCC
Q 018547 9 MMDKVVLDDIIRRLLEGRGGKQVQLSESEIRQLCVNARQIFLSQPNLVEVEAP----IRICGDVHGQYQDLLRLFEHGGY 84 (354)
Q Consensus 9 ~~~~~~~~~~i~~~~~~~~~~~~~l~~~~i~~l~~~a~~il~~ep~vl~l~~~----i~ViGDIHG~~~~L~~il~~~g~ 84 (354)
+.+...++++++++... ..|+++++.+||++|.++|++||++++++.| ++||||||||+.+|.++|+..|+
T Consensus 10 ~i~~~~~~~~~~~~~~~-----~~l~~~~~~~l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDIHG~~~dL~~ll~~~g~ 84 (316)
T cd07417 10 KVTLEFVKEMIEWFKDQ-----KKLHKKYAYQILLQVKELLKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFELNGL 84 (316)
T ss_pred CCCHHHHHHHHHHHHcc-----CCCCHHHHHHHHHHHHHHHHhCCcceeccCCCCceeEEeecccCCHHHHHHHHHhcCC
Confidence 47888899999999763 2688999999999999999999999999866 99999999999999999999998
Q ss_pred CCC-CcEEeecCcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCchhhhhHhhhCChHHHHHHHhHHhHHHHhhhhhcCC
Q 018547 85 PPT-ANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLP 163 (354)
Q Consensus 85 ~~~-~~~vfLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~i~~~~gf~~e~~~~~~~~~~~~~~~~f~~LP 163 (354)
++. ++|||||||||||++|+||+.+++++|+.+|.++++||||||.+.++..|||..|+..+|+..+|+.+.++|++||
T Consensus 85 ~~~~~~ylFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~~~~l~~~~~~~f~~LP 164 (316)
T cd07417 85 PSETNPYLFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKYNEQMFDLFSEVFNWLP 164 (316)
T ss_pred CCccCeEEEEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhcccHHHHHHHHHHHHhch
Confidence 765 4699999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEcceEEEecCCC-CCCCCCHHHhhccCCCCCCCCCCcccccccCCCCCCCCCcccCCCCcceecChHHHHHHHHhC
Q 018547 164 VAALINEKILCMHGGL-SPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKN 242 (354)
Q Consensus 164 laaii~~~il~vHgGi-sp~~~~l~~i~~i~Rp~~~~~~~~~~dlLWsDP~~~~~~~~~~~rg~g~~fG~~~~~~fL~~~ 242 (354)
++++++++++|||||+ +|...++++++++.||.+.+++++++|+|||||.+. .+|.+|+||.|+.||++++++||++|
T Consensus 165 laaii~~~~~~vHgGi~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~-~~~~~s~Rg~g~~fg~~~~~~Fl~~n 243 (316)
T cd07417 165 LAHLINGKVLVVHGGLFSDDGVTLDDIRKIDRFRQPPDSGLMCELLWSDPQPQ-PGRSPSKRGVGCQFGPDVTKRFLEEN 243 (316)
T ss_pred HhheeCCeEEEEccccccCCCccHHHhhcccCCCCCCccccceeeeecCCCCC-CCCCccCCCCceEeCHHHHHHHHHHc
Confidence 9999999999999999 567899999999999999999999999999999854 68999999999999999999999999
Q ss_pred CCceEEEeeeeecCCeEEecCCeEEEEeeCCCCCCCCCCceeEEEecC-CceeEEEEecCCCCC
Q 018547 243 DLDLICRGHQVVEDGYEFFARRRLVTIFSAPNYGGEFDNAGALLSVNE-SLVCSFEILKPADKS 305 (354)
Q Consensus 243 ~l~~IIRgHq~v~~G~~~~~~~~~iTvfSa~~Y~~~~~N~ga~l~i~~-~~~~~~~~~~p~~~~ 305 (354)
|+++||||||++++||++.++++|+|||||||||+..+|+||++.|++ ++.++|++|+|.+..
T Consensus 244 ~l~~iiR~He~~~~G~~~~~~~~~~TvfSa~~Y~~~~~N~ga~~~i~~~~~~~~~~~~~~~~~~ 307 (316)
T cd07417 244 NLEYIIRSHEVKDEGYEVEHDGKCITVFSAPNYCDQMGNKGAFIRITGSDLKPKFTQFEAVPHP 307 (316)
T ss_pred CCcEEEECCcccceeEEEecCCeEEEEeCCccccCCCCcceEEEEEeCCCceeeeEeccCCCCC
Confidence 999999999999999999999999999999999999999999999999 899999999987544
No 12
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=8.8e-72 Score=538.60 Aligned_cols=285 Identities=41% Similarity=0.791 Sum_probs=266.3
Q ss_pred HHHHHHHHHccCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEeCCCCCHHHHHHHHHhCCCCCCCcEEeec
Q 018547 15 LDDIIRRLLEGRGGKQVQLSESEIRQLCVNARQIFLSQPNLVEVEAPIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLG 94 (354)
Q Consensus 15 ~~~~i~~~~~~~~~~~~~l~~~~i~~l~~~a~~il~~ep~vl~l~~~i~ViGDIHG~~~~L~~il~~~g~~~~~~~vfLG 94 (354)
++-+++.+.+. ..++++++.+||++|+++|++||++++++.|++||||||||+.+|.++|+..+.++.++|||||
T Consensus 3 ~~~~~~~~~~~-----~~l~~~~i~~l~~~~~~il~~e~~l~~i~~~i~ViGDIHG~~~dL~~l~~~~g~~~~~~ylFLG 77 (305)
T cd07416 3 IDVLKAHFMRE-----GRLSEEDALRIITEGAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSPANTRYLFLG 77 (305)
T ss_pred HHHHHHHHHcC-----CCCCHHHHHHHHHHHHHHHHhCCCeEccCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEEC
Confidence 45556666542 3588999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCchhhhhHhhhCChHHHHHHHhHHhHHHHhhhhhcCCceEEEcceEEE
Q 018547 95 DYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALINEKILC 174 (354)
Q Consensus 95 DyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~i~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaaii~~~il~ 174 (354)
||||||++|+||+.+++++|+.+|.++++||||||.+.++..|||.+|+..+|+.++|+.+.++|++||++++++++++|
T Consensus 78 DyVDRG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y~~~l~~~~~~~f~~LPlaaii~~~i~~ 157 (305)
T cd07416 78 DYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMEAFDCLPLAALMNQQFLC 157 (305)
T ss_pred CccCCCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhccHHHHHHHHHHHhhccceeEEcCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCCHHHhhccCCCCCCCCCCcccccccCCCCCCCC------CcccC-CCCcceecChHHHHHHHHhCCCceE
Q 018547 175 MHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIE------GWADS-DRGVSCTFGSDVVADFLDKNDLDLI 247 (354)
Q Consensus 175 vHgGisp~~~~l~~i~~i~Rp~~~~~~~~~~dlLWsDP~~~~~------~~~~~-~rg~g~~fG~~~~~~fL~~~~l~~I 247 (354)
||||++|.+.++++|+++.||.+.+..++++|+|||||..... +|.+| +||.|+.||++++++||++||+++|
T Consensus 158 vHGGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~~~Rg~g~~fG~~~~~~Fl~~n~l~~i 237 (305)
T cd07416 158 VHGGLSPELKTLDDIRKLDRFREPPAFGPMCDLLWSDPLEDFGNEKTQEHFVHNTVRGCSYFYSYRAVCEFLQKNNLLSI 237 (305)
T ss_pred EcCCCCcccccHHHhcccCCCCCCCCCCcceeeeecCcccccccccccccccccCCCCCceecCHHHHHHHHHHcCCeEE
Confidence 9999999999999999999999999999999999999975432 47765 8999999999999999999999999
Q ss_pred EEeeeeecCCeEEecCC------eEEEEeeCCCCCCCCCCceeEEEecCCceeEEEEecCCCCC
Q 018547 248 CRGHQVVEDGYEFFARR------RLVTIFSAPNYGGEFDNAGALLSVNESLVCSFEILKPADKS 305 (354)
Q Consensus 248 IRgHq~v~~G~~~~~~~------~~iTvfSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~ 305 (354)
|||||++++||++++++ +|+|||||||||+..+|+||++.++++. .+|++|+|.+..
T Consensus 238 iR~He~~~~G~~~~~~~~~~~~~~~iTvFSa~~Y~~~~~N~~a~l~i~~~~-~~~~~~~~~~~~ 300 (305)
T cd07416 238 IRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV-MNIRQFNCSPHP 300 (305)
T ss_pred EEeccccccceEEecCCCcCCCCcEEEEeCCccccCCCCceEEEEEEcCCc-ceEEEecCCCCC
Confidence 99999999999998876 8999999999999999999999999985 689999987654
No 13
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=3.6e-70 Score=529.05 Aligned_cols=284 Identities=47% Similarity=0.873 Sum_probs=264.1
Q ss_pred HHHHHHccCC-----CccccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEeCCCCCHHHHHHHHHhCCCCCC-----
Q 018547 18 IIRRLLEGRG-----GKQVQLSESEIRQLCVNARQIFLSQPNLVEVEAPIRICGDVHGQYQDLLRLFEHGGYPPT----- 87 (354)
Q Consensus 18 ~i~~~~~~~~-----~~~~~l~~~~i~~l~~~a~~il~~ep~vl~l~~~i~ViGDIHG~~~~L~~il~~~g~~~~----- 87 (354)
+|.+++++.. ..+..++++++.+||++|.++|++||++++++.|++||||||||+++|.++|+..++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~e~~~~~i~~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~ 80 (311)
T cd07419 1 IITHLLKPRIWKPPTDRRFFFNWNEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGD 80 (311)
T ss_pred ChHHhcCcccccCccccccCCCHHHHHHHHHHHHHHHHhCCCeEeeCCCEEEEEeccCCHHHHHHHHHHcCCCcccccCC
Confidence 3677777732 235679999999999999999999999999999999999999999999999999998754
Q ss_pred ---CcEEeecCcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCchhhhhHhhhCChHHHHHHHhH------HhHHHHhhh
Q 018547 88 ---ANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFNV------RLWKIFTDC 158 (354)
Q Consensus 88 ---~~~vfLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~i~~~~gf~~e~~~~~~~------~~~~~~~~~ 158 (354)
.+|||||||||||++|+||+.+++++|+.+|.++++||||||.+.++..+||..+|..+|+. .+|..+.++
T Consensus 81 ~~~~~~vfLGDyVDRGp~s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~ 160 (311)
T cd07419 81 IEYIDYLFLGDYVDRGSNSLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRL 160 (311)
T ss_pred CcCceEEEECCccCCCCChHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999998864 699999999
Q ss_pred hhcCCceEEEcceEEEecCCCCCCCCCHHHhhccCCCC-CCCCCCcccccccCCCCCC--CCCcccCC---CCcc--eec
Q 018547 159 FNCLPVAALINEKILCMHGGLSPELENLDQIRNISRPT-DIPDNGLLCDLLWSDPDAN--IEGWADSD---RGVS--CTF 230 (354)
Q Consensus 159 f~~LPlaaii~~~il~vHgGisp~~~~l~~i~~i~Rp~-~~~~~~~~~dlLWsDP~~~--~~~~~~~~---rg~g--~~f 230 (354)
|++||++++++++++|||||++|.+.++++|+.+.||. ..+..++++|+|||||... ..+|.+++ ||.| +.|
T Consensus 161 f~~LPl~avi~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~rg~g~~~~f 240 (311)
T cd07419 161 FEWLPLAAIIEDKILCMHGGIGRSINHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKF 240 (311)
T ss_pred HHhCchhheecccEEEEccCCCCCCCcHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccCCCCCCCCCcceeE
Confidence 99999999999999999999999999999999999998 4566789999999999864 45777776 9988 799
Q ss_pred ChHHHHHHHHhCCCceEEEeeeeecCCeEEecCCeEEEEeeCCCCCCCCCCceeEEEecCCceeEEEEecC
Q 018547 231 GSDVVADFLDKNDLDLICRGHQVVEDGYEFFARRRLVTIFSAPNYGGEFDNAGALLSVNESLVCSFEILKP 301 (354)
Q Consensus 231 G~~~~~~fL~~~~l~~IIRgHq~v~~G~~~~~~~~~iTvfSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p 301 (354)
|++++++||++||+++||||||++++||++.++++|+|||||||||+..+|+||++.+++++.+++.+++|
T Consensus 241 g~~~~~~Fl~~n~l~~iiRgHe~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~~ai~~i~~~~~~~~~~~~~ 311 (311)
T cd07419 241 GPDRVHRFLEENDLQMIIRAHECVMDGFERFAQGKLITLFSATNYCGTAGNAGAILVLGRDLTIIPKLIHP 311 (311)
T ss_pred CHHHHHHHHHHCCCeEEEEechhhhCCeEEeCCCeEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987
No 14
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=3.9e-67 Score=515.16 Aligned_cols=293 Identities=34% Similarity=0.639 Sum_probs=260.7
Q ss_pred CCChHHHHHHHHHHHccC----C-CccccCCHHHHHHHHHHHHHHHhhCCCeeeec----CcEEEEeCCCCCHHHHHHHH
Q 018547 9 MMDKVVLDDIIRRLLEGR----G-GKQVQLSESEIRQLCVNARQIFLSQPNLVEVE----APIRICGDVHGQYQDLLRLF 79 (354)
Q Consensus 9 ~~~~~~~~~~i~~~~~~~----~-~~~~~l~~~~i~~l~~~a~~il~~ep~vl~l~----~~i~ViGDIHG~~~~L~~il 79 (354)
..+.+.++++|+++.+.. + .....++.+++.+||++|+++|++||++++++ .|++||||||||+.+|.++|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~dL~~ll 85 (377)
T cd07418 6 ALTNEWVHELMSVFEWSSRNLPPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFLL 85 (377)
T ss_pred ccCHHHHHHHHHHHHhcccccCchhhccCCCHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHHHHHHH
Confidence 567888999999996641 1 11234889999999999999999999999998 79999999999999999999
Q ss_pred HhCCCCCC-CcEEeecCcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCchhhhhHhhhCChHHHHHHHh---HHhHHHH
Q 018547 80 EHGGYPPT-ANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFN---VRLWKIF 155 (354)
Q Consensus 80 ~~~g~~~~-~~~vfLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~i~~~~gf~~e~~~~~~---~~~~~~~ 155 (354)
+..|+++. +.|||||||||||++|+||+.+++++|+.+|.+|++||||||.+.++..|||.+|+..+|+ ..+|+.+
T Consensus 86 ~~~g~~~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~~~~l~~~~ 165 (377)
T cd07418 86 EDAGFPDQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDKGKHVYRKC 165 (377)
T ss_pred HHhCCCCCCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCchHHHHHHHH
Confidence 99999875 4599999999999999999999999999999999999999999999999999999999996 3799999
Q ss_pred hhhhhcCCceEEEcceEEEecCCC---------------------------CCCCCCHHHhhccCCCC-CCCCCC---cc
Q 018547 156 TDCFNCLPVAALINEKILCMHGGL---------------------------SPELENLDQIRNISRPT-DIPDNG---LL 204 (354)
Q Consensus 156 ~~~f~~LPlaaii~~~il~vHgGi---------------------------sp~~~~l~~i~~i~Rp~-~~~~~~---~~ 204 (354)
.++|++||+++++++++||||||| +|.+.++++|+.++||. +++..+ ++
T Consensus 166 ~~~f~~LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~~~~~i~ 245 (377)
T cd07418 166 LGCFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGSNLIP 245 (377)
T ss_pred HHHHHhCCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCCCCccccc
Confidence 999999999999999999999999 44567999999999984 666554 47
Q ss_pred cccccCCCCCCCCCcccC-CCCcceecChHHHHHHHHhCCCceEEEeeee------------ecCCeEEecC---CeEEE
Q 018547 205 CDLLWSDPDANIEGWADS-DRGVSCTFGSDVVADFLDKNDLDLICRGHQV------------VEDGYEFFAR---RRLVT 268 (354)
Q Consensus 205 ~dlLWsDP~~~~~~~~~~-~rg~g~~fG~~~~~~fL~~~~l~~IIRgHq~------------v~~G~~~~~~---~~~iT 268 (354)
+|+|||||... .+|.+| .||.|+.||++++++||++|++++||||||+ +++||++.++ ++|+|
T Consensus 246 ~dlLWSDP~~~-~g~~~~~~RG~g~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~~~~~~~liT 324 (377)
T cd07418 246 GDVLWSDPSLT-PGLSPNKQRGIGLLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDHDVESGKLIT 324 (377)
T ss_pred eeeEeeCCccC-CCCCccCCCCCccccCHHHHHHHHHHcCCcEEEECCCCcccccccccchhhhCceEEeccCCCCcEEE
Confidence 89999999854 677776 7999999999999999999999999999996 6799999887 89999
Q ss_pred EeeCCCCC------CCCCCceeEEEecCCc--eeEEEEecCC
Q 018547 269 IFSAPNYG------GEFDNAGALLSVNESL--VCSFEILKPA 302 (354)
Q Consensus 269 vfSa~~Y~------~~~~N~ga~l~i~~~~--~~~~~~~~p~ 302 (354)
|||||||| +.++|+||++.++.+. ..+|.+|+.+
T Consensus 325 vFSa~nY~~~~~~~~~~~N~ga~~~~~~~~~~~~~~~~~~~~ 366 (377)
T cd07418 325 LFSAPDYPQFQATEERYNNKGAYIILQPPDFSDPQFHTFEAV 366 (377)
T ss_pred EecCCccccccccccccCcceEEEEEecCCCCCccceEeecc
Confidence 99999999 6789999999986643 5677777665
No 15
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-67 Score=483.66 Aligned_cols=288 Identities=47% Similarity=0.921 Sum_probs=275.4
Q ss_pred HHHHHHHHHHHccCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEeCCCCCHHHHHHHHHhCCCCCCCcEEe
Q 018547 13 VVLDDIIRRLLEGRGGKQVQLSESEIRQLCVNARQIFLSQPNLVEVEAPIRICGDVHGQYQDLLRLFEHGGYPPTANYLF 92 (354)
Q Consensus 13 ~~~~~~i~~~~~~~~~~~~~l~~~~i~~l~~~a~~il~~ep~vl~l~~~i~ViGDIHG~~~~L~~il~~~g~~~~~~~vf 92 (354)
..++..|+++.+. .++++.++..+|+.|+++|.+|.++..+..|++|+||+||||++|.++++..|..++++|+|
T Consensus 18 ~~vd~~ie~L~~c-----k~lse~~v~~lc~~a~~~L~~e~nV~~v~~pvtvcGDvHGqf~dl~ELfkiGG~~pdtnylf 92 (319)
T KOG0371|consen 18 LDVDPWIEQLYKC-----KPLSEVDVSSLCLLAKEILDKEENVQPVNCPVTVCGDVHGQFHDLIELFKIGGLAPDTNYLF 92 (319)
T ss_pred cccccchHHHHhc-----CCCccccchhHHHHHHHHHhccccccccccceEEecCcchhHHHHHHHHHccCCCCCcceee
Confidence 3466677777654 47889999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCchhhhhHhhhCChHHHHHHH-hHHhHHHHhhhhhcCCceEEEcce
Q 018547 93 LGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRF-NVRLWKIFTDCFNCLPVAALINEK 171 (354)
Q Consensus 93 LGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~i~~~~gf~~e~~~~~-~~~~~~~~~~~f~~LPlaaii~~~ 171 (354)
+|||||||++|+|++.++.++|++||++|.+||||||.+.+..+|||++||.++| +..+|+.|.+.|+.+|+.|+|+++
T Consensus 93 mGDyvdrGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~anvw~~Ftdlfdy~P~tali~~~ 172 (319)
T KOG0371|consen 93 MGDYVDRGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESK 172 (319)
T ss_pred eeeecccccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccccchHHhhhhhhccchHhhhccc
Confidence 9999999999999999999999999999999999999999999999999999999 578999999999999999999999
Q ss_pred EEEecCCCCCCCCCHHHhhccCCCCCCCCCCcccccccCCCCCCCCCcccCCCCcceecChHHHHHHHHhCCCceEEEee
Q 018547 172 ILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGH 251 (354)
Q Consensus 172 il~vHgGisp~~~~l~~i~~i~Rp~~~~~~~~~~dlLWsDP~~~~~~~~~~~rg~g~~fG~~~~~~fL~~~~l~~IIRgH 251 (354)
|||+|||++|.+.+++.++.++|-.++|.++.+||||||||+ +..+|..++||.|+.||.+..++|-.+||+++|.|+|
T Consensus 173 ifc~HGgLspsi~tld~~r~~dr~~evphegpmcDlLwsdpd-dr~gwg~sprgag~tfg~di~~~fn~~n~lslisRah 251 (319)
T KOG0371|consen 173 IFCLHGGLSPSIDTLDLIRLLDRIQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDISEQFNHKNGLSLISRAH 251 (319)
T ss_pred eeeccCCcCcccchHHHHHHHHHhhcccCCCChhheeccCcc-cCCCCCCCCCCCCcccchhhHHHhhccCCchHhHHHH
Confidence 999999999999999999999999999999999999999998 5589999999999999999999999999999999999
Q ss_pred eeecCCeEEecCCeEEEEeeCCCCCCCCCCceeEEEecCCceeEEEEecCCCCCC
Q 018547 252 QVVEDGYEFFARRRLVTIFSAPNYGGEFDNAGALLSVNESLVCSFEILKPADKSL 306 (354)
Q Consensus 252 q~v~~G~~~~~~~~~iTvfSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~~ 306 (354)
|.+++||.+.+...++|+|||||||+.++|.+|++.++++...+|.+|+|++.+.
T Consensus 252 qlvm~g~nW~~~~~~vtiFSapnycYrcgn~a~i~e~d~~~~~~f~q~~psp~k~ 306 (319)
T KOG0371|consen 252 QLVMEGYNWYHLWNVVTIFSAPNYCYRCGNQAAIMERDDTKNYDFLQFDPSPRKV 306 (319)
T ss_pred HHHhcccceeeecceeEEccCCchhhccccHHHHhhhhhccCcceEEecCCcccc
Confidence 9999999999999999999999999999999999999999999999999976653
No 16
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=100.00 E-value=4.9e-66 Score=491.02 Aligned_cols=262 Identities=42% Similarity=0.832 Sum_probs=249.9
Q ss_pred ccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEeCCCCCHHHHHHHHHhCCCCCCCcEEeecCcccCCCCcHHHHHHH
Q 018547 31 VQLSESEIRQLCVNARQIFLSQPNLVEVEAPIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLL 110 (354)
Q Consensus 31 ~~l~~~~i~~l~~~a~~il~~ep~vl~l~~~i~ViGDIHG~~~~L~~il~~~g~~~~~~~vfLGDyVDRG~~s~evl~ll 110 (354)
.+++++..+.|+.++..+|++|++++++++||.|+|||||||.||+++|+..|-|..++|+|||||||||.+|+||+.+|
T Consensus 59 Grl~ee~alrIi~~~a~llr~Eknmi~v~APiTVCGDIHGQf~DLmKLFEVGG~PA~t~YLFLGDYVDRGyFSiECvlYL 138 (517)
T KOG0375|consen 59 GRLEEEQALRIINEGAALLRQEKNMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYL 138 (517)
T ss_pred cchhHHHHHHHHHHHHHHHhcCCceEeccCCeeEecccchHHHHHHHHHHccCCcccceeEeeccccccceeeeehHHHH
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCcEEEeCCCchhhhhHhhhCChHHHHHHHhHHhHHHHhhhhhcCCceEEEcceEEEecCCCCCCCCCHHHhh
Q 018547 111 LAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALINEKILCMHGGLSPELENLDQIR 190 (354)
Q Consensus 111 ~~Lk~~~p~~v~lLrGNHE~~~i~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaaii~~~il~vHgGisp~~~~l~~i~ 190 (354)
.+||+.||..+++||||||++.+..++.|..||.-+|+.++|+...+.|+.||+||+.+++++|||||+||++.++++|+
T Consensus 139 wsLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKYse~vYdaCmesFd~LPLAAlmNqQflCVHGGlSPEi~tl~DIr 218 (517)
T KOG0375|consen 139 WSLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMESFDCLPLAALMNQQFLCVHGGLSPEIHTLDDIR 218 (517)
T ss_pred HHHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhccHHHHHHHHHHhccchHHHHhcCceEEecCCCCcccccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCcccccccCCCCCCC------CCcccC-CCCcceecChHHHHHHHHhCCCceEEEeeeeecCCeEEecC
Q 018547 191 NISRPTDIPDNGLLCDLLWSDPDANI------EGWADS-DRGVSCTFGSDVVADFLDKNDLDLICRGHQVVEDGYEFFAR 263 (354)
Q Consensus 191 ~i~Rp~~~~~~~~~~dlLWsDP~~~~------~~~~~~-~rg~g~~fG~~~~~~fL~~~~l~~IIRgHq~v~~G~~~~~~ 263 (354)
++.|..++|.-+.+||||||||.++. +-|..| .||++|.|...++.+||+.||+--|||+||.++.||+.+.+
T Consensus 219 ~l~RF~EpPa~GpmCDLLWsDPlEdfgnek~~e~f~hNsvRGCSyfysy~A~C~FLq~nnLLSIiRAHEAQDaGYRMYrk 298 (517)
T KOG0375|consen 219 KLDRFKEPPAFGPMCDLLWSDPLEDFGNEKTSEHFTHNSVRGCSYFYSYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRK 298 (517)
T ss_pred hhhhccCCCccCcchhhhccChhhhccccccccccccCccccccceechHHHHHHHHhCCchhhhhhhhhhhhhhhhhhc
Confidence 99999999999999999999998642 234444 69999999999999999999999999999999999998766
Q ss_pred Ce------EEEEeeCCCCCCCCCCceeEEEecCCc
Q 018547 264 RR------LVTIFSAPNYGGEFDNAGALLSVNESL 292 (354)
Q Consensus 264 ~~------~iTvfSa~~Y~~~~~N~ga~l~i~~~~ 292 (354)
.+ +|||||||||-+.++|+||+++-+.+.
T Consensus 299 sqttGFPSLiTiFSAPNYLDvYnNKAAvLKYEnNV 333 (517)
T KOG0375|consen 299 SQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV 333 (517)
T ss_pred ccccCCchheeeecCCchhhhhccHHHHhhhhccc
Confidence 54 899999999999999999999988775
No 17
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=100.00 E-value=1e-54 Score=421.85 Aligned_cols=284 Identities=35% Similarity=0.667 Sum_probs=251.6
Q ss_pred ChHHHHHHHHHHHccCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeec----CcEEEEeCCCCCHHHHHHHHHhCCCCC
Q 018547 11 DKVVLDDIIRRLLEGRGGKQVQLSESEIRQLCVNARQIFLSQPNLVEVE----APIRICGDVHGQYQDLLRLFEHGGYPP 86 (354)
Q Consensus 11 ~~~~~~~~i~~~~~~~~~~~~~l~~~~i~~l~~~a~~il~~ep~vl~l~----~~i~ViGDIHG~~~~L~~il~~~g~~~ 86 (354)
....++.+|+..-. ++ +|++..++.|+.+|+++|++-|++-+++ ..|+||||+||.++||.-+|-+.|+|.
T Consensus 117 ~~~~i~~lieaFk~----kq-~LH~kYVl~iL~EakK~lkqmPnis~isTs~S~qVTiCGDLHGklDDL~~I~yKNGlPS 191 (631)
T KOG0377|consen 117 RKNHIDLLIEAFKK----KQ-RLHPKYVLLILREAKKSLKQMPNISRISTSVSQQVTICGDLHGKLDDLLVILYKNGLPS 191 (631)
T ss_pred CchHHHHHHHHHHH----hh-hccHHHHHHHHHHHHHHHHhCCCCCccccccccceEEeccccccccceEEEEecCCCCC
Confidence 34556666665532 22 7889999999999999999999999885 469999999999999999999999997
Q ss_pred CC-cEEeecCcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCchhhhhHhhhCChHHHHHHH---hHHhHHHHhhhhhcC
Q 018547 87 TA-NYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRF---NVRLWKIFTDCFNCL 162 (354)
Q Consensus 87 ~~-~~vfLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~i~~~~gf~~e~~~~~---~~~~~~~~~~~f~~L 162 (354)
.+ -|||.||+||||.+|+|||+.|+++-+.||..+++-|||||+.++|..|||-.|+..+| +.++.+.+.++|++|
T Consensus 192 ~~npYvFNGDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~KYk~~~k~Ilr~leevy~WL 271 (631)
T KOG0377|consen 192 SSNPYVFNGDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVESKYKRHGKRILRFLEEVYRWL 271 (631)
T ss_pred CCCCeeecCchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHHHhhhcccHHHHHHHHHHHhc
Confidence 65 59999999999999999999999999999999999999999999999999999999999 568999999999999
Q ss_pred CceEEEcceEEEecCCCCCCCCCHHHhhccCCC---------CCCC-------------CCCcccccccCCCCCCCCCcc
Q 018547 163 PVAALINEKILCMHGGLSPELENLDQIRNISRP---------TDIP-------------DNGLLCDLLWSDPDANIEGWA 220 (354)
Q Consensus 163 Plaaii~~~il~vHgGisp~~~~l~~i~~i~Rp---------~~~~-------------~~~~~~dlLWsDP~~~~~~~~ 220 (354)
|++.+++.++|++|||+| +.++++-+.+|+|. .+.. ++..+.|+|||||.....+|.
T Consensus 272 Pi~tiid~~ilvvHGGiS-d~Tdl~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DImWSDP~~~~GC~p 350 (631)
T KOG0377|consen 272 PIGTIIDSRILVVHGGIS-DSTDLDLLDKIERGKYVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDIMWSDPQATMGCVP 350 (631)
T ss_pred chhhhcccceEEEecCcc-cchhHHHHhhhhccceeEEecCCcccCccCCchhhhcChHHHHHHHHHHhcCcccccCCCc
Confidence 999999999999999998 45667777666652 1110 234678999999998777787
Q ss_pred cCCCCcceecChHHHHHHHHhCCCceEEEeeeeecCCeEEecCCeEEEEeeCCCCCCCCCCceeEEEecCCceeEEEEec
Q 018547 221 DSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVVEDGYEFFARRRLVTIFSAPNYGGEFDNAGALLSVNESLVCSFEILK 300 (354)
Q Consensus 221 ~~~rg~g~~fG~~~~~~fL~~~~l~~IIRgHq~v~~G~~~~~~~~~iTvfSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~ 300 (354)
+.-||.|++||+|++.+||++++++++||+|||.++||+|.++++|+|||||+||-...+|+||++++...++-.|.+..
T Consensus 351 Nt~RGgG~yFGpDvT~~~Lqk~~l~~liRSHECKpeGyEf~Hd~kvlTiFSASNYYe~GSNrGAYikl~~~~~PhfvQY~ 430 (631)
T KOG0377|consen 351 NTLRGGGCYFGPDVTDNFLQKHRLSYLIRSHECKPEGYEFCHDNKVLTIFSASNYYEIGSNRGAYIKLGNQLTPHFVQYQ 430 (631)
T ss_pred ccccCCcceeCchHHHHHHHHhCceeeeeecccCCCcceeeeCCeEEEEEeccchheecCCCceEEEeCCCCCchHHHHH
Confidence 77899999999999999999999999999999999999999999999999999999999999999999998877765544
No 18
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=100.00 E-value=5.6e-50 Score=395.98 Aligned_cols=273 Identities=43% Similarity=0.806 Sum_probs=256.5
Q ss_pred cCCHHHHHHHHHHHHHHHhhCCCeeeecC----cEEEEeCCCCCHHHHHHHHHhCCCCCCC-cEEeecCcccCCCCcHHH
Q 018547 32 QLSESEIRQLCVNARQIFLSQPNLVEVEA----PIRICGDVHGQYQDLLRLFEHGGYPPTA-NYLFLGDYVDRGKQSLET 106 (354)
Q Consensus 32 ~l~~~~i~~l~~~a~~il~~ep~vl~l~~----~i~ViGDIHG~~~~L~~il~~~g~~~~~-~~vfLGDyVDRG~~s~ev 106 (354)
.++..-.-.|+..+..+++++|++++++. .+.|+||+||++.++.++++..|.|+.+ .|+|.||+||||..|.|+
T Consensus 182 ~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ylfngdfv~rgs~s~e~ 261 (476)
T KOG0376|consen 182 KLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPYLFNGDFVDRGSWSVEV 261 (476)
T ss_pred ccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcccccccCceeeecccceee
Confidence 45566677899999999999999999864 4899999999999999999999998764 699999999999999999
Q ss_pred HHHHHHHHHhCCCcEEEeCCCchhhhhHhhhCChHHHHHHHhHHhHHHHhhhhhcCCceEEEcceEEEecCCCC-CCCCC
Q 018547 107 ICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALINEKILCMHGGLS-PELEN 185 (354)
Q Consensus 107 l~ll~~Lk~~~p~~v~lLrGNHE~~~i~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaaii~~~il~vHgGis-p~~~~ 185 (354)
+..+++.|+.+|+++|++|||||+..++..|||.+++..+|..+.+..+.++|..||++..++++++.+|||+. |.-.+
T Consensus 262 ~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyte~~~~~f~~~f~~LPl~~~i~~~~~~~hgglf~~~~v~ 341 (476)
T KOG0376|consen 262 ILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYTEEMFNLFSEVFIWLPLAHLINNKVLVMHGGLFSPDGVT 341 (476)
T ss_pred eeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhHHHHHHhhhhhhccccchhhhcCceEEEecCcCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999995 45578
Q ss_pred HHHhhccCCCCCCCCCCcccccccCCCCCCCCCcccCCCCcceecChHHHHHHHHhCCCceEEEeeeeecCCeEEecCCe
Q 018547 186 LDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVVEDGYEFFARRR 265 (354)
Q Consensus 186 l~~i~~i~Rp~~~~~~~~~~dlLWsDP~~~~~~~~~~~rg~g~~fG~~~~~~fL~~~~l~~IIRgHq~v~~G~~~~~~~~ 265 (354)
++++++|.|+...++.+..+++|||||+. ..|..++.||.|..||++++++||+.|+++.|||||++.+.||++.++|+
T Consensus 342 l~d~r~i~r~~~~~~~~~~~~~lws~pq~-~~g~s~S~r~~g~~fG~d~t~~f~~~n~l~~i~rshe~~d~gy~~eh~g~ 420 (476)
T KOG0376|consen 342 LEDFRNIDRFEQPPEEGLMCELLWSDPQP-ANGRSPSKRGVGLQFGPDVTERFLQDNNLDKIIRSHEVKDEGYEVEHSGK 420 (476)
T ss_pred HHHHHhhhhccCCcccccccccccCCCcc-ccCCCccccCceeeeCCCchhhHHhhcchHHHhhccccCCCceeeecCCc
Confidence 99999999998899999999999999985 48899999999999999999999999999999999999999999999999
Q ss_pred EEEEeeCCCCCCCCCCceeEEEec-CCceeEEEEecCCCCC
Q 018547 266 LVTIFSAPNYGGEFDNAGALLSVN-ESLVCSFEILKPADKS 305 (354)
Q Consensus 266 ~iTvfSa~~Y~~~~~N~ga~l~i~-~~~~~~~~~~~p~~~~ 305 (354)
|+|||||||||+..+|.||++.++ ++++-.+..|+|++..
T Consensus 421 l~tvfsapnycd~~~n~ga~i~~~~~~~~p~~~~~e~vp~~ 461 (476)
T KOG0376|consen 421 LITVFSAPNYCDQMGNKGAFIHLEPDDLTPNFYTFEAVPHP 461 (476)
T ss_pred EEEEecCcchhhhcCCcceEEEecCCCCccceeecccCCCC
Confidence 999999999999999999999999 6778888899988754
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=100.00 E-value=3.7e-36 Score=276.26 Aligned_cols=214 Identities=53% Similarity=0.846 Sum_probs=179.0
Q ss_pred EEEeCCCCCHHHHHHHHHhCCCCCCCcEEeecCcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCchhhhhHhhhCChHH
Q 018547 63 RICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDE 142 (354)
Q Consensus 63 ~ViGDIHG~~~~L~~il~~~g~~~~~~~vfLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~i~~~~gf~~e 142 (354)
+|||||||++++|.++++..+..+.+.+||||||||||+.+.+++.+++.++.. |.++++|+||||.+.++...++..+
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~~~ 79 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFYDE 79 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCcch
Confidence 589999999999999999999988899999999999999999999999999877 8899999999999998877665543
Q ss_pred H---------HHHHhHHhHHHHhhhhhcCCceEEEcc-eEEEecCCCCCCCCCHHHhhccCCCCCCCCCCcccccccCCC
Q 018547 143 C---------KRRFNVRLWKIFTDCFNCLPVAALINE-KILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDP 212 (354)
Q Consensus 143 ~---------~~~~~~~~~~~~~~~f~~LPlaaii~~-~il~vHgGisp~~~~l~~i~~i~Rp~~~~~~~~~~dlLWsDP 212 (354)
. .......++..+.+++..||+++.++. +++|||||++|.....++.. ..+......+++|++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~~~~~~~~------~~~~~~~~~~~lw~r~ 153 (225)
T cd00144 80 DEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGLPLEEQIK------EEPEDQLPEDLLWSDP 153 (225)
T ss_pred hhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCccchHHhhh------cCcccccceeeeecCC
Confidence 2 222345678889999999999999986 99999999999876655544 2334556789999999
Q ss_pred CCCCCCcccCCCCcceecChHHHHHHHHhCCCceEEEeeeeecCCeEEecCCeEEEEeeCCCCCCCCCCceeEEE
Q 018547 213 DANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVVEDGYEFFARRRLVTIFSAPNYGGEFDNAGALLS 287 (354)
Q Consensus 213 ~~~~~~~~~~~rg~g~~fG~~~~~~fL~~~~l~~IIRgHq~v~~G~~~~~~~~~iTvfSa~~Y~~~~~N~ga~l~ 287 (354)
.........+.++. |+++++.|++.++.+.|||||+++..|+.....++++||+|++.|++..+|..+.+.
T Consensus 154 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ii~GHt~~~~~~~~~~~~~~i~IDtg~~~~~~~~~~l~~~~ 224 (225)
T cd00144 154 LELPGGFGSSRRGG----GPDAVEWFLKKNGLKLIVRGHTPVEEGYEFGHDGNLITIDSGCNYCGGGGNKLAALV 224 (225)
T ss_pred CCCCCCCcCCCCCC----CHHHHHHHHHHCCCeEEEEcCccccCccEEcCCCCEEEEecCCcccCCCCccEEEEe
Confidence 75433333344444 999999999999999999999999999876778899999999999887777776653
No 20
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.94 E-value=8.3e-26 Score=212.35 Aligned_cols=121 Identities=23% Similarity=0.420 Sum_probs=98.5
Q ss_pred CcEEEEeCCCCCHHHHHHHHHhCCCC---------CCCcEEeecCcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCchh
Q 018547 60 APIRICGDVHGQYQDLLRLFEHGGYP---------PTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHED 130 (354)
Q Consensus 60 ~~i~ViGDIHG~~~~L~~il~~~g~~---------~~~~~vfLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~ 130 (354)
++++||||||||++.|.++|+++++. ..+++|||||||||||+|.||+.+++.+. .+.++++||||||.
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~ 78 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCN 78 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHH
Confidence 57899999999999999999998874 45789999999999999999999998884 45689999999999
Q ss_pred hhhHhhhCC-------hHHHHHHH-------hHHhHHHHhhhhhcCCceEEEc-ceEEEecCCCCCC
Q 018547 131 AKINRIYGF-------YDECKRRF-------NVRLWKIFTDCFNCLPVAALIN-EKILCMHGGLSPE 182 (354)
Q Consensus 131 ~~i~~~~gf-------~~e~~~~~-------~~~~~~~~~~~f~~LPlaaii~-~~il~vHgGisp~ 182 (354)
+.++...+- ..+....| ...+.+.+.++++++|++..++ ++++|||||+.|.
T Consensus 79 ~~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~ 145 (245)
T PRK13625 79 KLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQD 145 (245)
T ss_pred HHHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChH
Confidence 987654321 12222233 1346778899999999998774 5799999999885
No 21
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.94 E-value=1.1e-25 Score=206.80 Aligned_cols=174 Identities=24% Similarity=0.398 Sum_probs=129.8
Q ss_pred EEEeCCCCCHHHHHHHHHhCCC--------CCCCcEEeecCcccCCCCcHHHHHHHHHHHHh---CCCcEEEeCCCchhh
Q 018547 63 RICGDVHGQYQDLLRLFEHGGY--------PPTANYLFLGDYVDRGKQSLETICLLLAYKIR---YPDKIHLLRGNHEDA 131 (354)
Q Consensus 63 ~ViGDIHG~~~~L~~il~~~g~--------~~~~~~vfLGDyVDRG~~s~evl~ll~~Lk~~---~p~~v~lLrGNHE~~ 131 (354)
+||||||||+++|.++|+.+++ .+.+.+||+||+||||+++.+++.++++++.. .+.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 5899999999999999999875 35678999999999999999999999999754 467899999999999
Q ss_pred hhHhhhCChH-HHHHHHh------HHhH---HHHhhhhhcCCceEEEcceEEEecCCCCCCCCCHHHhhccCCCCCCCCC
Q 018547 132 KINRIYGFYD-ECKRRFN------VRLW---KIFTDCFNCLPVAALINEKILCMHGGLSPELENLDQIRNISRPTDIPDN 201 (354)
Q Consensus 132 ~i~~~~gf~~-e~~~~~~------~~~~---~~~~~~f~~LPlaaii~~~il~vHgGisp~~~~l~~i~~i~Rp~~~~~~ 201 (354)
.++..+.+.. ....... ...+ ..+.+|++++|+...++ +++|||||++|
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~~-~~~fvHag~~~-------------------- 139 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKVN-DTLFVHGGLGP-------------------- 139 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEEC-CEEEEeCCcHH--------------------
Confidence 9875543321 1111110 1122 34578999999998875 69999999844
Q ss_pred CcccccccCCCCCCCCCcccCCCCcceecChHHHHHHHHhCCCceEEEeeeeecCCeEEecCCeEEEEee
Q 018547 202 GLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVVEDGYEFFARRRLVTIFS 271 (354)
Q Consensus 202 ~~~~dlLWsDP~~~~~~~~~~~rg~g~~fG~~~~~~fL~~~~l~~IIRgHq~v~~G~~~~~~~~~iTvfS 271 (354)
+|++.-...... . .-+...++++++.++.++||+|||+++.|....+++++++|-+
T Consensus 140 ------~w~r~y~~~~~~---~-----~~~~~~~~~~l~~~~~~~iv~GHTh~~~~~~~~~~g~~i~ID~ 195 (208)
T cd07425 140 ------LWYRGYSKETSD---K-----ECAAAHLDKVLERLGAKRMVVGHTPQEGGIVTFCGGKVIRIDV 195 (208)
T ss_pred ------HHhhHhhhhhhh---c-----cchHHHHHHHHHHcCCCeEEEcCeeeecCceEEECCEEEEEeC
Confidence 333211000000 0 0012568889999999999999999998876688999999977
No 22
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.92 E-value=1.6e-23 Score=195.41 Aligned_cols=120 Identities=28% Similarity=0.526 Sum_probs=98.2
Q ss_pred CcEEEEeCCCCCHHHHHHHHHhCCCCC----------CCcEEeecCcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCch
Q 018547 60 APIRICGDVHGQYQDLLRLFEHGGYPP----------TANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHE 129 (354)
Q Consensus 60 ~~i~ViGDIHG~~~~L~~il~~~g~~~----------~~~~vfLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE 129 (354)
+|+.||||||||+.+|.++|+++++.+ .++++|||||||||++|.||+.+|.+++. +.++++|+||||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~--~~~~~~v~GNHE 78 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVA--AGAALCVPGNHD 78 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhh--CCcEEEEECCcH
Confidence 589999999999999999999998753 35899999999999999999999998864 347999999999
Q ss_pred hhhhHhhhC--------ChHHHHHHHh---HHhHHHHhhhhhcCCceEEEc-ceEEEecCCCCCC
Q 018547 130 DAKINRIYG--------FYDECKRRFN---VRLWKIFTDCFNCLPVAALIN-EKILCMHGGLSPE 182 (354)
Q Consensus 130 ~~~i~~~~g--------f~~e~~~~~~---~~~~~~~~~~f~~LPlaaii~-~~il~vHgGisp~ 182 (354)
.+.++...+ +. +....+. ..+.+.+.+||+.||+...++ ++++|||||+++.
T Consensus 79 ~~l~~~~~~~~~~~~~~~~-~t~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~ 142 (234)
T cd07423 79 NKLYRKLQGRNVKITHGLE-ETVAQLEAESEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEE 142 (234)
T ss_pred HHHHHHhcCCCccccCccc-chHHHHhhccHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChH
Confidence 998875432 22 2223332 457788899999999998775 4799999998874
No 23
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.91 E-value=1.1e-23 Score=195.21 Aligned_cols=115 Identities=24% Similarity=0.363 Sum_probs=92.2
Q ss_pred EEEeCCCCCHHHHHHHHHhCCCC--------CCCcEEeecCcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCchhhhhH
Q 018547 63 RICGDVHGQYQDLLRLFEHGGYP--------PTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKIN 134 (354)
Q Consensus 63 ~ViGDIHG~~~~L~~il~~~g~~--------~~~~~vfLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~i~ 134 (354)
+||||||||++.|.++|+.+++. +.+.+|||||||||||+|.+|+.++++++. +.++++|+||||.+.+.
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~~--~~~~~~l~GNHE~~ll~ 79 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMVD--AGHALAVMGNHEFNAIA 79 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhhc--CCCEEEEEccCcHHHHH
Confidence 68999999999999999998875 467899999999999999999999998853 45899999999999875
Q ss_pred hhhCC------------h-----HHHHHHHh--HHhHHHHhhhhhcCCceEEEcceEEEecCCCC
Q 018547 135 RIYGF------------Y-----DECKRRFN--VRLWKIFTDCFNCLPVAALINEKILCMHGGLS 180 (354)
Q Consensus 135 ~~~gf------------~-----~e~~~~~~--~~~~~~~~~~f~~LPlaaii~~~il~vHgGis 180 (354)
...+. . .+..+.+. .+.++...+||++||+.... ++++|||||+.
T Consensus 80 ~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~lP~~~~~-~~~~~VHAg~~ 143 (222)
T cd07413 80 WHTKDPSGGEWLRAHSKKNLRQHQAFLEQFREHSEEHKDWLEWFKTLPLFLDL-GGVRVVHACWD 143 (222)
T ss_pred hhhCCcccchhhhcCCCcccccHHHHHHHHhccchhHHHHHHHHhcCCcEEEE-CCEEEEECCcC
Confidence 43221 0 12222222 34567889999999999765 68999999986
No 24
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.90 E-value=4.4e-23 Score=196.90 Aligned_cols=121 Identities=21% Similarity=0.364 Sum_probs=99.2
Q ss_pred CcEEEEeCCCCCHHHHHHHHHhCCCC-CCCcEEeecCcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCchhhhhHhhhC
Q 018547 60 APIRICGDVHGQYQDLLRLFEHGGYP-PTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYG 138 (354)
Q Consensus 60 ~~i~ViGDIHG~~~~L~~il~~~g~~-~~~~~vfLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~i~~~~g 138 (354)
|+++||||||||+++|.++++++++. ..+.++|+||+|||||+|.||+.++.++ +.++++|+||||.+.+...+|
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l----~~~~~~VlGNHD~~ll~~~~g 76 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSL----GDSAVTVLGNHDLHLLAVAAG 76 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhc----CCCeEEEecChhHHHHHhhcC
Confidence 57999999999999999999999874 4678999999999999999999999876 457999999999998877666
Q ss_pred ChH-----HHHHHHhHHhHHHHhhhhhcCCceEEE-cceEEEecCCCCCCCC
Q 018547 139 FYD-----ECKRRFNVRLWKIFTDCFNCLPVAALI-NEKILCMHGGLSPELE 184 (354)
Q Consensus 139 f~~-----e~~~~~~~~~~~~~~~~f~~LPlaaii-~~~il~vHgGisp~~~ 184 (354)
... ...........+.+.+|++++|+...+ ++++++||||++|.+.
T Consensus 77 ~~~~~~~~~l~~~l~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~~ 128 (275)
T PRK00166 77 IKRNKKKDTLDPILEAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQWD 128 (275)
T ss_pred CccccchhHHHHHHccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCCC
Confidence 431 111112234456788999999998776 5689999999999874
No 25
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.90 E-value=7.7e-24 Score=200.27 Aligned_cols=119 Identities=27% Similarity=0.415 Sum_probs=99.1
Q ss_pred EEEEeCCCCCHHHHHHHHHhCCCC-CCCcEEeecCcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCchhhhhHhhhCCh
Q 018547 62 IRICGDVHGQYQDLLRLFEHGGYP-PTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFY 140 (354)
Q Consensus 62 i~ViGDIHG~~~~L~~il~~~g~~-~~~~~vfLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~i~~~~gf~ 140 (354)
++||||||||+++|+++|+++++. +.+.++|+||||||||+|.||+.++.+++ .++++|+||||.+.++..+|..
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~~ 76 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGIK 76 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCcc
Confidence 489999999999999999999986 57889999999999999999999998875 5899999999999988766643
Q ss_pred -----HHHHHHHhHHhHHHHhhhhhcCCceEEEcc-eEEEecCCCCCCCC
Q 018547 141 -----DECKRRFNVRLWKIFTDCFNCLPVAALINE-KILCMHGGLSPELE 184 (354)
Q Consensus 141 -----~e~~~~~~~~~~~~~~~~f~~LPlaaii~~-~il~vHgGisp~~~ 184 (354)
+.....+.....+.+.+|++++|+...+++ ++++||||++|.+.
T Consensus 77 ~~~~~~t~~~~l~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w~ 126 (257)
T cd07422 77 KPKKKDTLDDILNAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQWS 126 (257)
T ss_pred ccccHhHHHHHHhccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCCC
Confidence 111122233445678999999999988765 89999999999873
No 26
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.90 E-value=3.9e-23 Score=196.52 Aligned_cols=121 Identities=23% Similarity=0.387 Sum_probs=102.3
Q ss_pred CcEEEEeCCCCCHHHHHHHHHhCCCC-CCCcEEeecCcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCchhhhhHhhhC
Q 018547 60 APIRICGDVHGQYQDLLRLFEHGGYP-PTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYG 138 (354)
Q Consensus 60 ~~i~ViGDIHG~~~~L~~il~~~g~~-~~~~~vfLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~i~~~~g 138 (354)
|+++||||||||+++|+++|+++++. ..+.++|+||+|||||+|+||+.++.++ +.++++|+||||.+.++..+|
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l----~~~~~~VlGNHD~~lL~~~~g 76 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSL----GDAVRLVLGNHDLHLLAVFAG 76 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhc----CCCeEEEEChhHHHHHHHhcC
Confidence 57899999999999999999999976 4678999999999999999999999876 356889999999999988777
Q ss_pred Ch-----HHHHHHHhHHhHHHHhhhhhcCCceEEEc-ceEEEecCCCCCCCC
Q 018547 139 FY-----DECKRRFNVRLWKIFTDCFNCLPVAALIN-EKILCMHGGLSPELE 184 (354)
Q Consensus 139 f~-----~e~~~~~~~~~~~~~~~~f~~LPlaaii~-~~il~vHgGisp~~~ 184 (354)
+. +.....+.....+.+.+|++++|+....+ .++++||||++|.+.
T Consensus 77 ~~~~~~~d~l~~~l~a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w~ 128 (279)
T TIGR00668 77 ISRNKPKDRLDPLLEAPDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQWD 128 (279)
T ss_pred CCccCchHHHHHHHHccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCCc
Confidence 52 33333345567788999999999997654 369999999999873
No 27
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.89 E-value=1.4e-22 Score=187.16 Aligned_cols=115 Identities=24% Similarity=0.377 Sum_probs=89.8
Q ss_pred CcEEEEeCCCCCHHHHHHHHHhCCCC-CCCcEEeecCcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCchhhhhHhhhC
Q 018547 60 APIRICGDVHGQYQDLLRLFEHGGYP-PTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYG 138 (354)
Q Consensus 60 ~~i~ViGDIHG~~~~L~~il~~~g~~-~~~~~vfLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~i~~~~g 138 (354)
++++||||||||+++|+++|+.+++. ..++++||||+|||||+|.||+.++.. .+++.|+||||.+.++...+
T Consensus 17 ~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~------~~~~~v~GNHE~~~l~~~~~ 90 (218)
T PRK11439 17 RHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEE------HWVRAVRGNHEQMALDALAS 90 (218)
T ss_pred CeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHHHHHHHHc------CCceEeeCchHHHHHHHHHC
Confidence 48999999999999999999999886 567899999999999999999999854 25789999999998875432
Q ss_pred ChH--------HHHHHH---hHHhHHHHhhhhhcCCceEEEc---ceEEEecCCCC
Q 018547 139 FYD--------ECKRRF---NVRLWKIFTDCFNCLPVAALIN---EKILCMHGGLS 180 (354)
Q Consensus 139 f~~--------e~~~~~---~~~~~~~~~~~f~~LPlaaii~---~~il~vHgGis 180 (354)
-.. +....+ ..+.+..+.+++++||+...++ +++++||||++
T Consensus 91 ~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p 146 (218)
T PRK11439 91 QQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYP 146 (218)
T ss_pred CccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCC
Confidence 110 001111 1234566678999999997653 46999999974
No 28
>PHA02239 putative protein phosphatase
Probab=99.88 E-value=4.6e-22 Score=186.01 Aligned_cols=137 Identities=26% Similarity=0.420 Sum_probs=100.8
Q ss_pred CcEEEEeCCCCCHHHHHHHHHhCCCC--CCCcEEeecCcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCchhhhhHhhh
Q 018547 60 APIRICGDVHGQYQDLLRLFEHGGYP--PTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIY 137 (354)
Q Consensus 60 ~~i~ViGDIHG~~~~L~~il~~~g~~--~~~~~vfLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~i~~~~ 137 (354)
|++++||||||++..|.++++.+... +.+.++|+|||||||++|.+++..++.+. ..+.++++|+||||.+.++...
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~-~~~~~~~~l~GNHE~~~l~~~~ 79 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLM-SNDDNVVTLLGNHDDEFYNIME 79 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHh-hcCCCeEEEECCcHHHHHHHHh
Confidence 57899999999999999999987543 46789999999999999999999998875 3466899999999998765321
Q ss_pred CC-----h---------HHHHHHHh-------------------------------HHhHHHHhhhhhcCCceEEEcceE
Q 018547 138 GF-----Y---------DECKRRFN-------------------------------VRLWKIFTDCFNCLPVAALINEKI 172 (354)
Q Consensus 138 gf-----~---------~e~~~~~~-------------------------------~~~~~~~~~~f~~LPlaaii~~~i 172 (354)
+. . .+....|+ ...+..+..|++.||+.... +++
T Consensus 80 ~~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~~-~~~ 158 (235)
T PHA02239 80 NVDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYKE-DKY 158 (235)
T ss_pred CchhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEEE-CCE
Confidence 10 0 11122331 01234556799999999765 589
Q ss_pred EEecCCCCCCCCCHHHhhccCCCCCCCCCCcccccccCCC
Q 018547 173 LCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDP 212 (354)
Q Consensus 173 l~vHgGisp~~~~l~~i~~i~Rp~~~~~~~~~~dlLWsDP 212 (354)
+|||||+.|... +++ ....+++|.+.
T Consensus 159 ifVHAGi~p~~~-~~~-------------q~~~~llWiR~ 184 (235)
T PHA02239 159 IFSHSGGVSWKP-VEE-------------QTIDQLIWSRD 184 (235)
T ss_pred EEEeCCCCCCCC-hhh-------------CCHhHeEEecc
Confidence 999999988532 221 12368899875
No 29
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.88 E-value=5.6e-22 Score=181.48 Aligned_cols=169 Identities=23% Similarity=0.315 Sum_probs=116.8
Q ss_pred CcEEEEeCCCCCHHHHHHHHHhCCCC-CCCcEEeecCcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCchhhhhHhhhC
Q 018547 60 APIRICGDVHGQYQDLLRLFEHGGYP-PTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYG 138 (354)
Q Consensus 60 ~~i~ViGDIHG~~~~L~~il~~~g~~-~~~~~vfLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~i~~~~g 138 (354)
++++||||||||+.+|+++++..++. ..+.++|+|||||||+++.|++.++.. .++++++||||.+.+....+
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~~~~~~ 74 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAIDALRA 74 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHHhHhhC
Confidence 47999999999999999999998875 467788999999999999999998854 36899999999998876544
Q ss_pred C--hHHHHHHH---------hHHhHHHHhhhhhcCCceEEEc---ceEEEecCCCCCCCCCHHHhhccCCCCCCCCCCcc
Q 018547 139 F--YDECKRRF---------NVRLWKIFTDCFNCLPVAALIN---EKILCMHGGLSPELENLDQIRNISRPTDIPDNGLL 204 (354)
Q Consensus 139 f--~~e~~~~~---------~~~~~~~~~~~f~~LPlaaii~---~~il~vHgGisp~~~~l~~i~~i~Rp~~~~~~~~~ 204 (354)
. ..+..... ..++++...+|+++||+...++ .++++||||+++... ...+. + +..+....
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~~~-~~~~~---~--~~~~~~~~ 148 (207)
T cd07424 75 EPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSDDW-SDGVG---A--VTLRPEDI 148 (207)
T ss_pred CCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcchh-hhhhh---c--cccCcccc
Confidence 2 12221111 1225666888999999998775 379999999865431 11100 0 11223345
Q ss_pred cccccCCCCCCCCCcccCCCCcceecChHHHHHHHHhCCCceEEEeeeeecCCeE
Q 018547 205 CDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVVEDGYE 259 (354)
Q Consensus 205 ~dlLWsDP~~~~~~~~~~~rg~g~~fG~~~~~~fL~~~~l~~IIRgHq~v~~G~~ 259 (354)
.+++|++|....... ...-+.+.||.||++++..+.
T Consensus 149 ~~~~w~~~~~~~~~~-------------------~~~~~~~~iV~GHTh~~~~~~ 184 (207)
T cd07424 149 EELLWSRTRIQKAQT-------------------QPIKGVDAVVHGHTPVKRPLR 184 (207)
T ss_pred eeeeeccchhhhcCc-------------------cccCCCCEEEECCCCCCcceE
Confidence 678998774211000 001134679999999875443
No 30
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.87 E-value=1.6e-21 Score=186.18 Aligned_cols=148 Identities=22% Similarity=0.309 Sum_probs=107.8
Q ss_pred cEEEEeCCCCCHHHHHHHHHhCCCC------CCCcEEeecCcccCCCCcHHHHHHHHHHHHhCCC-cEEEeCCCchhhhh
Q 018547 61 PIRICGDVHGQYQDLLRLFEHGGYP------PTANYLFLGDYVDRGKQSLETICLLLAYKIRYPD-KIHLLRGNHEDAKI 133 (354)
Q Consensus 61 ~i~ViGDIHG~~~~L~~il~~~g~~------~~~~~vfLGDyVDRG~~s~evl~ll~~Lk~~~p~-~v~lLrGNHE~~~i 133 (354)
++++||||||+++.|.++++.+... ..+.+|||||||||||+|.+|+.+|++++..+|. ++++|+||||.+.+
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~l 82 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAFA 82 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHHH
Confidence 6999999999999999999865422 2456999999999999999999999999988876 68999999998865
Q ss_pred HhhhC---------Ch------------------------------------------------------HHHHHHHh--
Q 018547 134 NRIYG---------FY------------------------------------------------------DECKRRFN-- 148 (354)
Q Consensus 134 ~~~~g---------f~------------------------------------------------------~e~~~~~~-- 148 (354)
..... |. .+....|+
T Consensus 83 ~fL~~~p~~~d~~~f~~~w~~~~~~~e~~~~~~~~~~~~~h~~g~~W~~~~~~~~~~~~~~~~~~~~~gg~~Tl~SYGv~ 162 (304)
T cd07421 83 AFLGVLPRPSDGSEFKSTWKEYEKNEEREGWYKGEGFENMHLQGRRWAGKMKVTFNTVRGEPYKGSIYDARPTFESYGVP 162 (304)
T ss_pred hHhhcCCCccchhhhhhhhccccccccccccccccccccccccccchhhhccccccccccccccccccCcHHHHHHcCCC
Confidence 43211 00 12223332
Q ss_pred -------HHhHHHHhhhhhcCCceEEEcceE-------------EEecCCCCCCCCCHHHhhccC-CCCCCCCCCccccc
Q 018547 149 -------VRLWKIFTDCFNCLPVAALINEKI-------------LCMHGGLSPELENLDQIRNIS-RPTDIPDNGLLCDL 207 (354)
Q Consensus 149 -------~~~~~~~~~~f~~LPlaaii~~~i-------------l~vHgGisp~~~~l~~i~~i~-Rp~~~~~~~~~~dl 207 (354)
..+-+...+|++.||..... +++ +|||||+-|...--+|.+.+. +.+..|. .++
T Consensus 163 ~~~~~l~~avP~~H~~fl~~l~~~~~~-~~~~~~~~~g~~~~~lifVHAGlrPg~pLe~Q~~~L~~~d~~~p~----~~~ 237 (304)
T cd07421 163 HGSSDLIKAVPEEHKKFLRNLVWVHEE-DDVCIETEEGLKHCKLIAVHAGLEKSNSVEEQLKLLRTKDTSIPK----IAP 237 (304)
T ss_pred cchHHHHHhCCHHHHHHHHhCCceEEe-CcccccccccccccceEEEEcccCCCCChHHhhhhhhcccccccc----ccc
Confidence 23445678999999998664 345 999999999877556655432 2222332 277
Q ss_pred ccCCCC
Q 018547 208 LWSDPD 213 (354)
Q Consensus 208 LWsDP~ 213 (354)
||.+..
T Consensus 238 l~~R~~ 243 (304)
T cd07421 238 LSGRKN 243 (304)
T ss_pred cccchh
Confidence 887664
No 31
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.84 E-value=1e-20 Score=175.04 Aligned_cols=115 Identities=25% Similarity=0.300 Sum_probs=86.7
Q ss_pred CcEEEEeCCCCCHHHHHHHHHhCCCC-CCCcEEeecCcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCchhhhhHhhhC
Q 018547 60 APIRICGDVHGQYQDLLRLFEHGGYP-PTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYG 138 (354)
Q Consensus 60 ~~i~ViGDIHG~~~~L~~il~~~g~~-~~~~~vfLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~i~~~~g 138 (354)
.+++||||||||+++|+++++.+.+. ..+.++|+||||||||+|.||+.++.+ .+++.||||||.+.+....+
T Consensus 15 ~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNHE~~~~~~~~~ 88 (218)
T PRK09968 15 RHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNHEAMALDAFET 88 (218)
T ss_pred CeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECchHHHHHHHHhc
Confidence 48999999999999999999998865 457888999999999999999998843 36899999999998865421
Q ss_pred Ch-H-------HHHHHHh---HHhHHHHhhhhhcCCceEEEc---ceEEEecCCCC
Q 018547 139 FY-D-------ECKRRFN---VRLWKIFTDCFNCLPVAALIN---EKILCMHGGLS 180 (354)
Q Consensus 139 f~-~-------e~~~~~~---~~~~~~~~~~f~~LPlaaii~---~~il~vHgGis 180 (354)
-. . +....+. ........+++++||+...+. .++++||||++
T Consensus 89 ~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p 144 (218)
T PRK09968 89 GDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYP 144 (218)
T ss_pred CChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCC
Confidence 10 0 1111111 123334566899999997664 36899999984
No 32
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.45 E-value=1.2e-12 Score=109.68 Aligned_cols=159 Identities=23% Similarity=0.268 Sum_probs=103.7
Q ss_pred CcEEEEeCCCCCHHHH----HHHHHhCCCCCCCcEEeecCcccCCCCcHHHHHHH--HHHHHhCCCcEEEeCCCchhhhh
Q 018547 60 APIRICGDVHGQYQDL----LRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLL--LAYKIRYPDKIHLLRGNHEDAKI 133 (354)
Q Consensus 60 ~~i~ViGDIHG~~~~L----~~il~~~g~~~~~~~vfLGDyVDRG~~s~evl~ll--~~Lk~~~p~~v~lLrGNHE~~~i 133 (354)
++|+++||+|+..... ..+.+.....+.+.+|++||++|+|..+.+..... ...+...+..+++++||||....
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~ 80 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSG 80 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhcccccccccccccccee
Confidence 4799999999999987 34444444455677889999999999988877664 55566778899999999999986
Q ss_pred HhhhCChHHHHH----------------------------------HHhHHhHHHHhhhhhcCCceEEEcceEEEecCCC
Q 018547 134 NRIYGFYDECKR----------------------------------RFNVRLWKIFTDCFNCLPVAALINEKILCMHGGL 179 (354)
Q Consensus 134 ~~~~gf~~e~~~----------------------------------~~~~~~~~~~~~~f~~LPlaaii~~~il~vHgGi 179 (354)
...+........ ............+.............++++|.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~H~p~ 160 (200)
T PF00149_consen 81 NSFYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEAKNDDPVIVFTHHPP 160 (200)
T ss_dssp HHHHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHEEEESEEEEEESSSS
T ss_pred ccccccccccccccccccccccccCcceeeecccccccccccccccccccccchhcccccccccccccccceeEEEecCC
Confidence 543322211110 0011111122222222333334456899999998
Q ss_pred CCCCCCHHHhhccCCCCCCCCCCcccccccCCCCCCCCCcccCCCCcceecChHHHHHHHHhCCCceEEEeeeee
Q 018547 180 SPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVV 254 (354)
Q Consensus 180 sp~~~~l~~i~~i~Rp~~~~~~~~~~dlLWsDP~~~~~~~~~~~rg~g~~fG~~~~~~fL~~~~l~~IIRgHq~v 254 (354)
.+....-.+. .....+.+.+..++++.++++++.||+..
T Consensus 161 ~~~~~~~~~~------------------------------------~~~~~~~~~~~~~~~~~~v~~~~~GH~H~ 199 (200)
T PF00149_consen 161 YSSSSDSSSY------------------------------------GNESKGREALEELLKKYNVDLVLSGHTHR 199 (200)
T ss_dssp STTSSSTHHH------------------------------------SSEEEHHHHHHHHHHHTTCSEEEEESSSS
T ss_pred CCcccccccc------------------------------------chhhccHHHHHHHHhhCCCCEEEeCceec
Confidence 7632111110 12356678899999999999999999874
No 33
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=99.22 E-value=2.4e-11 Score=102.11 Aligned_cols=144 Identities=40% Similarity=0.618 Sum_probs=121.7
Q ss_pred hHhhhCChHHHHHHHhHH-hHHH---HhhhhhcCCceEEEcc-eEEEecCCCCCCC-CCHHHhhccCCCC--CCCCCCcc
Q 018547 133 INRIYGFYDECKRRFNVR-LWKI---FTDCFNCLPVAALINE-KILCMHGGLSPEL-ENLDQIRNISRPT--DIPDNGLL 204 (354)
Q Consensus 133 i~~~~gf~~e~~~~~~~~-~~~~---~~~~f~~LPlaaii~~-~il~vHgGisp~~-~~l~~i~~i~Rp~--~~~~~~~~ 204 (354)
++..+|+.+++...++.. .|.. ..++|+.+|+.+++++ .++|.|++++|.+ ..+++++.+.|.. .....+..
T Consensus 3 l~~~~~~~~~~~~~~~~~~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~ 82 (155)
T COG0639 3 LTALYGFYDEKLRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRLLDIIEVLDRLRACEVPHAGHT 82 (155)
T ss_pred hhhhhchhHHhhhhcCCceeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcchhhhHHHHHHHhhhhcccCCCcccc
Confidence 455677888877777654 5666 9999999999999988 9999999999976 6788888888776 66777888
Q ss_pred cccccCCCCCC-CCCcccCCCCcceecChHHHHHHHHhCCCceEEEeeeeecCCeEEecCCeEEEEeeCCCCCC
Q 018547 205 CDLLWSDPDAN-IEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVVEDGYEFFARRRLVTIFSAPNYGG 277 (354)
Q Consensus 205 ~dlLWsDP~~~-~~~~~~~~rg~g~~fG~~~~~~fL~~~~l~~IIRgHq~v~~G~~~~~~~~~iTvfSa~~Y~~ 277 (354)
.+.+|+++... ...|.++.+|.+..+ .+....|+..+..+.+.++|+.+..++...+.+..+|.||+++||.
T Consensus 83 ~~~~~~~~~~~~~~~w~~~~~g~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~~d~~~~~~~~~lt~~~~~~~~~ 155 (155)
T COG0639 83 HDLLWSDPDGGDRRIWNPGPRGVPRDG-GDVTAVFGIVHTPKLIERAHVLYDIDTGAVFGGGLLTAFSAPNYCY 155 (155)
T ss_pred ccccCCCCCCCcccccccCCCCCCccc-cchhhHHhhhcccceEEEEeEEEecCceEEeCCCeeeEEecccccC
Confidence 88899999863 678999999998877 7888999988888889999999999999887767999999999973
No 34
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.21 E-value=4.5e-10 Score=97.41 Aligned_cols=83 Identities=25% Similarity=0.357 Sum_probs=63.5
Q ss_pred cEEEEeCCCCCHHHHHHHHHhCCCCCCCcEEeecCcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCchhhhhHhhhCCh
Q 018547 61 PIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFY 140 (354)
Q Consensus 61 ~i~ViGDIHG~~~~L~~il~~~g~~~~~~~vfLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~i~~~~gf~ 140 (354)
++.++||+||+...+.++++.... .+.++++||++++++.+. + .....++.++||||....
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~--------~--~~~~~~~~V~GNhD~~~~------- 61 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VDLIIHAGDVLYPGPLNE--------L--ELKAPVIAVRGNCDGEVD------- 61 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CCEEEECCccccccccch--------h--hcCCcEEEEeCCCCCcCC-------
Confidence 578999999999999999998654 678999999999998765 1 223469999999998532
Q ss_pred HHHHHHHhHHhHHHHhhhhhcCCceEEEc---ceEEEecCCCC
Q 018547 141 DECKRRFNVRLWKIFTDCFNCLPVAALIN---EKILCMHGGLS 180 (354)
Q Consensus 141 ~e~~~~~~~~~~~~~~~~f~~LPlaaii~---~~il~vHgGis 180 (354)
+..+|....++ .+++++||...
T Consensus 62 ------------------~~~~p~~~~~~~~g~~i~v~Hg~~~ 86 (155)
T cd00841 62 ------------------FPILPEEAVLEIGGKRIFLTHGHLY 86 (155)
T ss_pred ------------------cccCCceEEEEECCEEEEEECCccc
Confidence 34566554443 37999999653
No 35
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.17 E-value=3.9e-10 Score=96.88 Aligned_cols=137 Identities=21% Similarity=0.292 Sum_probs=85.6
Q ss_pred CcEEEEeCCCCCHHHHHHHHHhCCCCCCCcEEeecCcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCchhhhhHhhhCC
Q 018547 60 APIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGF 139 (354)
Q Consensus 60 ~~i~ViGDIHG~~~~L~~il~~~g~~~~~~~vfLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~i~~~~gf 139 (354)
|+++++||+|++..++.++++.+ ...+.++++||++|+ .+++..+... .++.++||||..........
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~----~~~~~~~~~~------~~~~v~GNHD~~~~~~~~~~ 68 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP----EEVLELLRDI------PVYVVRGNHDNWAFPNENDE 68 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH----HHHHHHHHHH------EEEEE--CCHSTHHHSEECT
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH----HHHHHHHhcC------CEEEEeCCcccccchhhhhc
Confidence 68999999999999999999987 346778899999993 6666666443 69999999997553322110
Q ss_pred hHHHHHHHhHHhHHHHhhhhhcCCceEEEcceEEEecCCCCCCCCCHHHhhccCCCCCCCCCCcccccccCCCCCCCCCc
Q 018547 140 YDECKRRFNVRLWKIFTDCFNCLPVAALINEKILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGW 219 (354)
Q Consensus 140 ~~e~~~~~~~~~~~~~~~~f~~LPlaaii~~~il~vHgGisp~~~~l~~i~~i~Rp~~~~~~~~~~dlLWsDP~~~~~~~ 219 (354)
.. +.+.... ..-..+++++||....
T Consensus 69 ~~----------------~~~~~~~-~~~~~~i~~~H~~~~~-------------------------------------- 93 (156)
T PF12850_consen 69 EY----------------LLDALRL-TIDGFKILLSHGHPYD-------------------------------------- 93 (156)
T ss_dssp CS----------------SHSEEEE-EETTEEEEEESSTSSS--------------------------------------
T ss_pred cc----------------cccceee-eecCCeEEEECCCCcc--------------------------------------
Confidence 00 1111111 1224589999996543
Q ss_pred ccCCCCcceecChHHHHHHHHhCCCceEEEeeeeecCCeEEecCCeEEEEeeC
Q 018547 220 ADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVVEDGYEFFARRRLVTIFSA 272 (354)
Q Consensus 220 ~~~~rg~g~~fG~~~~~~fL~~~~l~~IIRgHq~v~~G~~~~~~~~~iTvfSa 272 (354)
...+.+.+.+.+...+.++++-||...+.-.+ ..+..+++.-|.
T Consensus 94 --------~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~-~~~~~~~~~Gs~ 137 (156)
T PF12850_consen 94 --------VQWDPAELREILSRENVDLVLHGHTHRPQVFK-IGGIHVINPGSI 137 (156)
T ss_dssp --------STTTHHHHHHHHHHTTSSEEEESSSSSEEEEE-ETTEEEEEE-GS
T ss_pred --------cccChhhhhhhhcccCCCEEEcCCcccceEEE-ECCEEEEECCcC
Confidence 01334556777889999999999998754333 233344554443
No 36
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.12 E-value=1.7e-09 Score=94.58 Aligned_cols=63 Identities=19% Similarity=0.174 Sum_probs=48.5
Q ss_pred CcEEEEeCCCCCHHHHHHHHHhCCCC-CCCcEEeecCcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCchhh
Q 018547 60 APIRICGDVHGQYQDLLRLFEHGGYP-PTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDA 131 (354)
Q Consensus 60 ~~i~ViGDIHG~~~~L~~il~~~g~~-~~~~~vfLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~ 131 (354)
|++.|+||+||+..++..+++..... ..+.++++||++ +.+++..+..+ ...++.++||||..
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~-----~~~~~~~l~~~----~~~~~~V~GN~D~~ 64 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLT-----SPFVLKEFEDL----AAKVIAVRGNNDGE 64 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCC-----CHHHHHHHHHh----CCceEEEccCCCch
Confidence 57999999999998877766655554 567788999998 45676666443 23599999999983
No 37
>PRK09453 phosphodiesterase; Provisional
Probab=99.05 E-value=7.1e-10 Score=99.35 Aligned_cols=69 Identities=26% Similarity=0.333 Sum_probs=55.1
Q ss_pred CcEEEEeCCCCCHHHHHHHHHhCCCCCCCcEEeecCcccCCCC--------cHHHHHHHHHHHHhCCCcEEEeCCCchhh
Q 018547 60 APIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQ--------SLETICLLLAYKIRYPDKIHLLRGNHEDA 131 (354)
Q Consensus 60 ~~i~ViGDIHG~~~~L~~il~~~g~~~~~~~vfLGDyVDRG~~--------s~evl~ll~~Lk~~~p~~v~lLrGNHE~~ 131 (354)
|++.++||+||++.++.++++.+...+.+.++++||++|+|++ +.+++..+..+ +..+++++||||..
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~----~~~v~~V~GNhD~~ 76 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY----ADKIIAVRGNCDSE 76 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhc----CCceEEEccCCcch
Confidence 5899999999999999999988755566889999999999874 45566555332 34799999999975
Q ss_pred h
Q 018547 132 K 132 (354)
Q Consensus 132 ~ 132 (354)
.
T Consensus 77 ~ 77 (182)
T PRK09453 77 V 77 (182)
T ss_pred h
Confidence 3
No 38
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=98.96 E-value=4.1e-09 Score=89.76 Aligned_cols=118 Identities=20% Similarity=0.213 Sum_probs=78.9
Q ss_pred cEEEEeCCCCCHHHHHHHHHhCCCCCCCcEEeecCcccCCCCcH--HHHHHHHHHHHhCCCcEEEeCCCchhhhhHhhhC
Q 018547 61 PIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSL--ETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYG 138 (354)
Q Consensus 61 ~i~ViGDIHG~~~~L~~il~~~g~~~~~~~vfLGDyVDRG~~s~--evl~ll~~Lk~~~p~~v~lLrGNHE~~~i~~~~g 138 (354)
++.++||+||++. .....+.+.++++||+++++..+. +.+.++..++ . ..++++.||||....
T Consensus 1 ~i~~isD~H~~~~-------~~~~~~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~--~-~~~~~v~GNHD~~~~----- 65 (135)
T cd07379 1 RFVCISDTHSRHR-------TISIPDGDVLIHAGDLTERGTLEELQKFLDWLKSLP--H-PHKIVIAGNHDLTLD----- 65 (135)
T ss_pred CEEEEeCCCCCCC-------cCcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhCC--C-CeEEEEECCCCCcCC-----
Confidence 4789999999987 122345577889999999986432 2333333221 1 236789999996421
Q ss_pred ChHHHHHHHhHHhHHHHhhhhhcCCceEEEcceEEEecCCCCCCCCCHHHhhccCCCCCCCCCCcccccccCCCCCCCCC
Q 018547 139 FYDECKRRFNVRLWKIFTDCFNCLPVAALINEKILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEG 218 (354)
Q Consensus 139 f~~e~~~~~~~~~~~~~~~~f~~LPlaaii~~~il~vHgGisp~~~~l~~i~~i~Rp~~~~~~~~~~dlLWsDP~~~~~~ 218 (354)
.-+.+++++||.+.+.. +..+ +
T Consensus 66 ----------------------------~~~~~ilv~H~~p~~~~----------------------~~~~--~------ 87 (135)
T cd07379 66 ----------------------------PEDTDILVTHGPPYGHL----------------------DLVS--S------ 87 (135)
T ss_pred ----------------------------CCCCEEEEECCCCCcCc----------------------cccc--c------
Confidence 11357999999542200 0000 0
Q ss_pred cccCCCCcceecChHHHHHHHHhCCCceEEEeeeeecCCeE
Q 018547 219 WADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVVEDGYE 259 (354)
Q Consensus 219 ~~~~~rg~g~~fG~~~~~~fL~~~~l~~IIRgHq~v~~G~~ 259 (354)
....|.+.+.+++++.+.++++-||...+.|++
T Consensus 88 --------~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 120 (135)
T cd07379 88 --------GQRVGCEELLNRVQRVRPKLHVFGHIHEGYGAE 120 (135)
T ss_pred --------CcccCCHHHHHHHHHHCCcEEEEcCcCCcCcee
Confidence 124677889999999999999999999988876
No 39
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=98.83 E-value=2.8e-08 Score=93.18 Aligned_cols=156 Identities=22% Similarity=0.257 Sum_probs=96.4
Q ss_pred cEEEEeCCCCCHHHHH-HHHHhCCCCCCCcEEeecCcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCchhhhhHhh---
Q 018547 61 PIRICGDVHGQYQDLL-RLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRI--- 136 (354)
Q Consensus 61 ~i~ViGDIHG~~~~L~-~il~~~g~~~~~~~vfLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~i~~~--- 136 (354)
+|+++|||||++.... +.++.. ..+.+|++||+++ .+.+++..+..+ +..++.++||||.+.....
T Consensus 2 rIa~isDiHg~~~~~~~~~l~~~---~pD~Vl~~GDi~~---~~~~~~~~l~~l----~~p~~~V~GNHD~~~~~~~~~k 71 (238)
T cd07397 2 RIAIVGDVHGQWDLEDIKALHLL---QPDLVLFVGDFGN---ESVQLVRAISSL----PLPKAVILGNHDAWYDATFRKK 71 (238)
T ss_pred EEEEEecCCCCchHHHHHHHhcc---CCCEEEECCCCCc---ChHHHHHHHHhC----CCCeEEEcCCCcccccccccch
Confidence 6899999999987643 344432 3478899999986 456666665443 3468999999998653200
Q ss_pred -----------------hC-------------------------ChHHHHHHHh-HHhHHHHhhhhhcCCceEEEcceEE
Q 018547 137 -----------------YG-------------------------FYDECKRRFN-VRLWKIFTDCFNCLPVAALINEKIL 173 (354)
Q Consensus 137 -----------------~g-------------------------f~~e~~~~~~-~~~~~~~~~~f~~LPlaaii~~~il 173 (354)
++ ...+++..|+ ...++.+...++.++.+......+|
T Consensus 72 ~~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~ive~~~~~~~~~~~Vl 151 (238)
T cd07397 72 GDRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRIIAAAKKAPPDLPLIL 151 (238)
T ss_pred HHHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHHHHhhhcCCCCCeEE
Confidence 00 0025666663 3455667777787764433345799
Q ss_pred EecCCCCCCCCCHHHhhccCCCCCCCCCCcccccccCCCCCCCCCcccCCCCcceecChHHHHHHHHhCC----CceEEE
Q 018547 174 CMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKND----LDLICR 249 (354)
Q Consensus 174 ~vHgGisp~~~~l~~i~~i~Rp~~~~~~~~~~dlLWsDP~~~~~~~~~~~rg~g~~fG~~~~~~fL~~~~----l~~IIR 249 (354)
+.|++++.... +.+ +|. ...|.+. +..+|...+.+.+++.. .++++=
T Consensus 152 iaH~~~~G~g~---~~~--------------------~~c--g~d~~~~----~~~~G~~~l~~ai~~~~~~~~~~l~~f 202 (238)
T cd07397 152 LAHNGPSGLGS---DAE--------------------DPC--GRDWKPP----GGDWGDPDLALAISQIQQGRQVPLVVF 202 (238)
T ss_pred EeCcCCcCCCc---ccc--------------------ccc--ccccCCc----CCCCCCHHHHHHHHHHhccCCCCEEEe
Confidence 99999865221 100 111 0123321 22467777777666554 789999
Q ss_pred eeeeec
Q 018547 250 GHQVVE 255 (354)
Q Consensus 250 gHq~v~ 255 (354)
||-.-.
T Consensus 203 GH~H~~ 208 (238)
T cd07397 203 GHMHHR 208 (238)
T ss_pred CCccCc
Confidence 998754
No 40
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.82 E-value=4.5e-08 Score=79.90 Aligned_cols=118 Identities=27% Similarity=0.380 Sum_probs=85.5
Q ss_pred EEEeCCCCCHHHHHHHH--HhCCCCCCCcEEeecCcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCchhhhhHhhhCCh
Q 018547 63 RICGDVHGQYQDLLRLF--EHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFY 140 (354)
Q Consensus 63 ~ViGDIHG~~~~L~~il--~~~g~~~~~~~vfLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~i~~~~gf~ 140 (354)
+++||+|+......... ........+.+|++||+++.+....+...............++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD----------- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD----------- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce-----------
Confidence 37899999999888765 33334455778899999999998887665533444456778999999999
Q ss_pred HHHHHHHhHHhHHHHhhhhhcCCceEEEcceEEEecCCCCCCCCCHHHhhccCCCCCCCCCCcccccccCCCCCCCCCcc
Q 018547 141 DECKRRFNVRLWKIFTDCFNCLPVAALINEKILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWA 220 (354)
Q Consensus 141 ~e~~~~~~~~~~~~~~~~f~~LPlaaii~~~il~vHgGisp~~~~l~~i~~i~Rp~~~~~~~~~~dlLWsDP~~~~~~~~ 220 (354)
++++|+.+.+...... +
T Consensus 70 -------------------------------i~~~H~~~~~~~~~~~---------------------~----------- 86 (131)
T cd00838 70 -------------------------------ILLTHGPPYDPLDELS---------------------P----------- 86 (131)
T ss_pred -------------------------------EEEeccCCCCCchhhc---------------------c-----------
Confidence 8999998765211000 0
Q ss_pred cCCCCcceecChHHHHHHHHhCCCceEEEeeeeecCCeEE
Q 018547 221 DSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVVEDGYEF 260 (354)
Q Consensus 221 ~~~rg~g~~fG~~~~~~fL~~~~l~~IIRgHq~v~~G~~~ 260 (354)
........+...+.+.+.+.++.||+.....+..
T Consensus 87 ------~~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~~ 120 (131)
T cd00838 87 ------DEDPGSEALLELLEKYGVDLVLSGHTHVYERREP 120 (131)
T ss_pred ------cchhhHHHHHHHHHHhCCCEEEeCCeeccccccC
Confidence 0001567788889999999999999998766543
No 41
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=98.73 E-value=1.2e-07 Score=83.74 Aligned_cols=66 Identities=21% Similarity=0.223 Sum_probs=46.5
Q ss_pred EEEEeCCCCCHHHHHHHHHhCCCCCCCcEEeecCcccCCCCc-HHHHHHHHHHHHhCCCcEEEeCCCchhhhh
Q 018547 62 IRICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQS-LETICLLLAYKIRYPDKIHLLRGNHEDAKI 133 (354)
Q Consensus 62 i~ViGDIHG~~~~L~~il~~~g~~~~~~~vfLGDyVDRG~~s-~evl~ll~~Lk~~~p~~v~lLrGNHE~~~i 133 (354)
|.++||+||++..+.. ......+.+.+|+.||++++|... .+.+..+ + ..+..++.+.||||....
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~l---~-~~~~p~~~v~GNHD~~~~ 67 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAEEADAVIVAGDITNFGGKEAAVEINLL---L-AIGVPVLAVPGNCDTPEI 67 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhccCCCEEEECCCccCcCCHHHHHHHHHH---H-hcCCCEEEEcCCCCCHHH
Confidence 5789999999999877 222333457788999999998763 2322222 2 235569999999997543
No 42
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.65 E-value=9e-08 Score=84.07 Aligned_cols=67 Identities=21% Similarity=0.197 Sum_probs=47.6
Q ss_pred EEEEeCCCCCHHHHHHHH-HhCCCCCCCcEEeecCcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCchhh
Q 018547 62 IRICGDVHGQYQDLLRLF-EHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDA 131 (354)
Q Consensus 62 i~ViGDIHG~~~~L~~il-~~~g~~~~~~~vfLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~ 131 (354)
+.++||+|++.......+ +.......+.++++||+++++..+.... ++ .....+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~~~~~~-~~--~~~~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDAPRFAP-LL--LALKGFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcchHHHHH-HH--HhhcCCccEEEeCCCcceE
Confidence 468999999988776655 2233344567889999999987665543 21 1233456799999999986
No 43
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.60 E-value=2e-06 Score=77.23 Aligned_cols=125 Identities=22% Similarity=0.297 Sum_probs=79.7
Q ss_pred cEEEEeCCC-CCHH-----HHHHHHHhCCCCCCCcEEeecCcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCchhhhhH
Q 018547 61 PIRICGDVH-GQYQ-----DLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKIN 134 (354)
Q Consensus 61 ~i~ViGDIH-G~~~-----~L~~il~~~g~~~~~~~vfLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~i~ 134 (354)
.|.||||.| |.-. .+.++++. .+.+.++.+||+++ .+++.++..+ ...++.++||||...
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~---~~~d~iih~GDi~~-----~~~~~~l~~~----~~~~~~V~GN~D~~~-- 66 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVP---GKIQHVLCTGNLCS-----KETYDYLKTI----APDVHIVRGDFDENL-- 66 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhcc---CCCCEEEECCCCCC-----HHHHHHHHhh----CCceEEEECCCCccc--
Confidence 478999999 6543 35555554 34577889999987 6777666444 225899999999731
Q ss_pred hhhCChHHHHHHHhHHhHHHHhhhhhcCCceEEEc---ceEEEecCCCCCCCCCHHHhhccCCCCCCCCCCcccccccCC
Q 018547 135 RIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIN---EKILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSD 211 (354)
Q Consensus 135 ~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaaii~---~~il~vHgGisp~~~~l~~i~~i~Rp~~~~~~~~~~dlLWsD 211 (354)
.+|....++ .+++++||..-. .|
T Consensus 67 --------------------------~lp~~~~~~~~g~~i~l~HG~~~~--------------------------~~-- 92 (178)
T cd07394 67 --------------------------NYPETKVITVGQFKIGLIHGHQVV--------------------------PW-- 92 (178)
T ss_pred --------------------------cCCCcEEEEECCEEEEEEECCcCC--------------------------CC--
Confidence 345544443 389999994210 00
Q ss_pred CCCCCCCcccCCCCcceecChHHHHHHHHhCCCceEEEeeeeecCCeEEecCCeEEEEeeC
Q 018547 212 PDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVVEDGYEFFARRRLVTIFSA 272 (354)
Q Consensus 212 P~~~~~~~~~~~rg~g~~fG~~~~~~fL~~~~l~~IIRgHq~v~~G~~~~~~~~~iTvfSa 272 (354)
...+.+.++.++.+.+.+|-||+..+.- +...+..++.--|+
T Consensus 93 ------------------~~~~~~~~~~~~~~~dvii~GHTH~p~~-~~~~g~~viNPGSv 134 (178)
T cd07394 93 ------------------GDPDSLAALQRQLDVDILISGHTHKFEA-FEHEGKFFINPGSA 134 (178)
T ss_pred ------------------CCHHHHHHHHHhcCCCEEEECCCCcceE-EEECCEEEEECCCC
Confidence 0234556667778899999999998632 22233334444444
No 44
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.56 E-value=6.6e-07 Score=76.10 Aligned_cols=107 Identities=20% Similarity=0.211 Sum_probs=74.9
Q ss_pred EEEeCCCCCHHHHHHHHHhCCCCCCCcEEeecCcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCchhhhhHhhhCChHH
Q 018547 63 RICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDE 142 (354)
Q Consensus 63 ~ViGDIHG~~~~L~~il~~~g~~~~~~~vfLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~i~~~~gf~~e 142 (354)
.|+||.||..+.+.++... ..+.+.++++||+. .+++..+..+ .+..++.++||||
T Consensus 1 ~viSDtH~~~~~~~~~~~~--~~~~d~ii~~GD~~------~~~~~~~~~~---~~~~~~~V~GN~D------------- 56 (129)
T cd07403 1 LVISDTESPALYSPEIKVR--LEGVDLILSAGDLP------KEYLEYLVTM---LNVPVYYVHGNHD------------- 56 (129)
T ss_pred CeeccccCccccchHHHhh--CCCCCEEEECCCCC------hHHHHHHHHH---cCCCEEEEeCCCc-------------
Confidence 3899999998888887765 35567899999973 3445555444 1335899999999
Q ss_pred HHHHHhHHhHHHHhhhhhcCCceEEEcceEEEecCCCCCCCCCHHHhhccCCCCCCCCCCcccccccCCCCCCCCCcccC
Q 018547 143 CKRRFNVRLWKIFTDCFNCLPVAALINEKILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWADS 222 (354)
Q Consensus 143 ~~~~~~~~~~~~~~~~f~~LPlaaii~~~il~vHgGisp~~~~l~~i~~i~Rp~~~~~~~~~~dlLWsDP~~~~~~~~~~ 222 (354)
-+++++|+-+.+. .+++ .
T Consensus 57 ---------------------------~~Ilv~H~pp~~~-------------------------~~~~---~------- 74 (129)
T cd07403 57 ---------------------------VDILLTHAPPAGI-------------------------GDGE---D------- 74 (129)
T ss_pred ---------------------------cCEEEECCCCCcC-------------------------cCcc---c-------
Confidence 3799999832110 0000 0
Q ss_pred CCCcceecChHHHHHHHHhCCCceEEEeeeeecCCeE
Q 018547 223 DRGVSCTFGSDVVADFLDKNDLDLICRGHQVVEDGYE 259 (354)
Q Consensus 223 ~rg~g~~fG~~~~~~fL~~~~l~~IIRgHq~v~~G~~ 259 (354)
...-|.+.+.+++++.+.++++-||...+..+.
T Consensus 75 ----~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 75 ----FAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred ----ccccCHHHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence 012356788899999999999999999877665
No 45
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.56 E-value=1.3e-06 Score=81.86 Aligned_cols=205 Identities=17% Similarity=0.189 Sum_probs=103.9
Q ss_pred CcEEEEeCCCCC------HHHHHHHHHhCCCCCCCcEEeecCcccC--C-----CCcHHHHHHHHHHHHhCCCcEEEeCC
Q 018547 60 APIRICGDVHGQ------YQDLLRLFEHGGYPPTANYLFLGDYVDR--G-----KQSLETICLLLAYKIRYPDKIHLLRG 126 (354)
Q Consensus 60 ~~i~ViGDIHG~------~~~L~~il~~~g~~~~~~~vfLGDyVDR--G-----~~s~evl~ll~~Lk~~~p~~v~lLrG 126 (354)
|++++++|+|.. ...+.+.++... ...+.++++||++|. | +...+++.++..++. .+..++++.|
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~~-~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~-~g~~v~~v~G 78 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGEA-RQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSD-SGVPCYFMHG 78 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhhh-ccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHH-cCCeEEEEeC
Confidence 579999999954 234555554321 245678899999985 2 234566667666642 3357999999
Q ss_pred CchhhhhHhhhCChHHHHHHHhHHhHHHHhhhhhcCCceEEEc-ceEEEecCCCCCCCC-CHHHhhccCCCCCCCCCCcc
Q 018547 127 NHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIN-EKILCMHGGLSPELE-NLDQIRNISRPTDIPDNGLL 204 (354)
Q Consensus 127 NHE~~~i~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaaii~-~~il~vHgGisp~~~-~l~~i~~i~Rp~~~~~~~~~ 204 (354)
|||..... ...+..+. ..+.. |....++ .+++++||-.-+... .-...+++-|.. -..
T Consensus 79 NHD~~~~~-------~~~~~~g~-------~~l~~-~~~~~~~g~~i~l~HGd~~~~~d~~y~~~r~~~r~~-----~~~ 138 (241)
T PRK05340 79 NRDFLLGK-------RFAKAAGM-------TLLPD-PSVIDLYGQRVLLLHGDTLCTDDKAYQRFRRKVRNP-----WLQ 138 (241)
T ss_pred CCchhhhH-------HHHHhCCC-------EEeCC-cEEEEECCEEEEEECCcccccCCHHHHHHHHHHhCH-----HHH
Confidence 99974321 01111111 11111 2222334 469999997654221 112223322210 000
Q ss_pred cccccCCCCCC----CCCcc-----cCC-CC-cceecChHHHHHHHHhCCCceEEEeeeeecCCeEEecCCeEEEEeeCC
Q 018547 205 CDLLWSDPDAN----IEGWA-----DSD-RG-VSCTFGSDVVADFLDKNDLDLICRGHQVVEDGYEFFARRRLVTIFSAP 273 (354)
Q Consensus 205 ~dlLWsDP~~~----~~~~~-----~~~-rg-~g~~fG~~~~~~fL~~~~l~~IIRgHq~v~~G~~~~~~~~~iTvfSa~ 273 (354)
.-+.. =|-.. ...+. .+. +. .-....++.+.+.+++.+.+.+|.||...+.-.....++.-++-.+-+
T Consensus 139 ~~~~~-~p~~~~~~ia~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~~~~~~~lg 217 (241)
T PRK05340 139 WLFLA-LPLSIRLRIAAKMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAIHQLQAGGQPATRIVLG 217 (241)
T ss_pred HHHHh-CCHHHHHHHHHHHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcceeeccCCCcceEEEEeC
Confidence 00000 00000 00000 000 01 112234577888999999999999999986544333333112222223
Q ss_pred CCCCCCCCceeEEEecCC
Q 018547 274 NYGGEFDNAGALLSVNES 291 (354)
Q Consensus 274 ~Y~~~~~N~ga~l~i~~~ 291 (354)
+. ...+.++.+++.
T Consensus 218 dw----~~~~~~~~~~~~ 231 (241)
T PRK05340 218 DW----HEQGSVLKVDAD 231 (241)
T ss_pred CC----CCCCeEEEEECC
Confidence 22 233777887776
No 46
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=98.55 E-value=1.8e-07 Score=87.15 Aligned_cols=71 Identities=8% Similarity=0.135 Sum_probs=57.7
Q ss_pred CcEEEEeCCCCCHHHHHHHHHhCCCCCCCcEEeecCcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCchhh
Q 018547 60 APIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDA 131 (354)
Q Consensus 60 ~~i~ViGDIHG~~~~L~~il~~~g~~~~~~~vfLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~ 131 (354)
+++.+++|+||++..+.++++.......+.+|++||++++|+..-++..++..+. ..+..++.++||||..
T Consensus 5 ~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~-~l~~pv~~V~GNhD~~ 75 (224)
T cd07388 5 RYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILG-EAHLPTFYVPGPQDAP 75 (224)
T ss_pred eEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHH-hcCCceEEEcCCCChH
Confidence 5799999999999999999987644556789999999999977766666665553 2345789999999985
No 47
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=98.45 E-value=3e-06 Score=72.33 Aligned_cols=118 Identities=22% Similarity=0.230 Sum_probs=74.0
Q ss_pred EEEEeCCCCCHH----------HHHHHHHhCCCCCCCcEEeecCcccCCCCc-H-HHHHHHHHHHHhCCCcEEEeCCCch
Q 018547 62 IRICGDVHGQYQ----------DLLRLFEHGGYPPTANYLFLGDYVDRGKQS-L-ETICLLLAYKIRYPDKIHLLRGNHE 129 (354)
Q Consensus 62 i~ViGDIHG~~~----------~L~~il~~~g~~~~~~~vfLGDyVDRG~~s-~-evl~ll~~Lk~~~p~~v~lLrGNHE 129 (354)
++.++|+|=.-. .|.++++.......+.++++||+++.|... . +...++-.++... ..++.++||||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNHD 79 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNHD 79 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCCe
Confidence 467899993211 122344444444567788999999998742 1 2223333332111 37999999999
Q ss_pred hhhhHhhhCChHHHHHHHhHHhHHHHhhhhhcCCceEEEcceEEEecCCCCCCCCCHHHhhccCCCCCCCCCCccccccc
Q 018547 130 DAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALINEKILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLW 209 (354)
Q Consensus 130 ~~~i~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaaii~~~il~vHgGisp~~~~l~~i~~i~Rp~~~~~~~~~~dlLW 209 (354)
. ++++|..+.+.-
T Consensus 80 ~-----------------------------------------iv~~Hhp~~~~~-------------------------- 92 (144)
T cd07400 80 V-----------------------------------------IVVLHHPLVPPP-------------------------- 92 (144)
T ss_pred E-----------------------------------------EEEecCCCCCCC--------------------------
Confidence 8 888998654310
Q ss_pred CCCCCCCCCcccCCCCcceecChHHHHHHHHhCCCceEEEeeeeecCCeEE
Q 018547 210 SDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVVEDGYEF 260 (354)
Q Consensus 210 sDP~~~~~~~~~~~rg~g~~fG~~~~~~fL~~~~l~~IIRgHq~v~~G~~~ 260 (354)
. .+... .. +.+.+.+++++.++++++-||...+..+.+
T Consensus 93 --~-----~~~~~-----~~-~~~~~~~~l~~~~~~~~l~GH~H~~~~~~~ 130 (144)
T cd07400 93 --G-----SGRER-----LL-DAGDALKLLAEAGVDLVLHGHKHVPYVGNI 130 (144)
T ss_pred --c-----ccccc-----CC-CHHHHHHHHHHcCCCEEEECCCCCcCeeec
Confidence 0 00000 01 567889999999999999999998765553
No 48
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.41 E-value=1.9e-06 Score=80.29 Aligned_cols=205 Identities=15% Similarity=0.136 Sum_probs=99.1
Q ss_pred EEEEeCCCCCH------HHHHHHHHhCCCCCCCcEEeecCcccCC-----CC--cHHHHHHHHHHHHhCCCcEEEeCCCc
Q 018547 62 IRICGDVHGQY------QDLLRLFEHGGYPPTANYLFLGDYVDRG-----KQ--SLETICLLLAYKIRYPDKIHLLRGNH 128 (354)
Q Consensus 62 i~ViGDIHG~~------~~L~~il~~~g~~~~~~~vfLGDyVDRG-----~~--s~evl~ll~~Lk~~~p~~v~lLrGNH 128 (354)
+++++|+|... ..+.+.+..... ..+.++++||++|.. +. ..++...+..++. .+..++.+.|||
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~~-~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~-~~~~v~~v~GNH 78 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEAR-KADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSD-QGVPCYFMHGNR 78 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhhc-cCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHH-CCCeEEEEcCCC
Confidence 36899999532 234555544322 456788999999952 11 1344555555543 346799999999
Q ss_pred hhhhhHhhhCChHHHHHHHhHHhHHHHhhhhhcCCceEEE-cceEEEecCCCCCC-CCCHHHhhccCC-CC------CCC
Q 018547 129 EDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALI-NEKILCMHGGLSPE-LENLDQIRNISR-PT------DIP 199 (354)
Q Consensus 129 E~~~i~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaaii-~~~il~vHgGisp~-~~~l~~i~~i~R-p~------~~~ 199 (354)
|...-. ...+..+ ..++.. |....+ +.+++++||-.-.. ...-.-.+++-| |. ..|
T Consensus 79 D~~~~~-------~~~~~~g-------i~~l~~-~~~~~~~g~~ill~HGd~~~~~d~~y~~~r~~~r~~~~~~~~~~l~ 143 (231)
T TIGR01854 79 DFLIGK-------RFAREAG-------MTLLPD-PSVIDLYGQKVLLMHGDTLCTDDTAYQAFRAKVHQPWLQRLFLHLP 143 (231)
T ss_pred chhhhH-------HHHHHCC-------CEEECC-CEEEEECCEEEEEEcCccccCCCHHHHHHHHHHhCHHHHHHHHhCC
Confidence 974211 0000001 011111 112222 35899999964421 111111222211 10 000
Q ss_pred -C-CCcccccccCCCCCCCCCcccCCCCcceecChHHHHHHHHhCCCceEEEeeeeecCCeEEecCCeEEEEeeCCCCCC
Q 018547 200 -D-NGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVVEDGYEFFARRRLVTIFSAPNYGG 277 (354)
Q Consensus 200 -~-~~~~~dlLWsDP~~~~~~~~~~~rg~g~~fG~~~~~~fL~~~~l~~IIRgHq~v~~G~~~~~~~~~iTvfSa~~Y~~ 277 (354)
+ ...+...+|+..... . ......-....++.+++.++..+.+++|.||+..+.-..+..++.-.+-.+-++..
T Consensus 144 ~~~r~~l~~~~~~~s~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GHtH~~~~~~~~~~~~~~~~~~lgdW~- 218 (231)
T TIGR01854 144 LAVRVKLARKIRAESRAD-K---QMKSQDIMDVNPAEVAAVMRRYGVDRLIHGHTHRPAIHPLQADGQPATRIVLGDWY- 218 (231)
T ss_pred HHHHHHHHHHHHHHHHHh-c---CCCcchhhCCCHHHHHHHHHHcCCCEEEECCccCcceeecccCCCccEEEEECCCc-
Confidence 0 001112222211100 0 00000112235677889899999999999999986545443333223444444432
Q ss_pred CCCCceeEEEecCC
Q 018547 278 EFDNAGALLSVNES 291 (354)
Q Consensus 278 ~~~N~ga~l~i~~~ 291 (354)
..+.++.++++
T Consensus 219 ---~~~~~~~~~~~ 229 (231)
T TIGR01854 219 ---RQGSILRVDAD 229 (231)
T ss_pred ---cCCeEEEEcCC
Confidence 23555666554
No 49
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=98.32 E-value=3.2e-05 Score=71.24 Aligned_cols=194 Identities=18% Similarity=0.143 Sum_probs=98.6
Q ss_pred cEEEEeCCCCC----HHHH----HHHHHhCCCCCCCcEEeecCcccCCCCcHHHHHHHHHHHHh--CCCcEEEeCCCchh
Q 018547 61 PIRICGDVHGQ----YQDL----LRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIR--YPDKIHLLRGNHED 130 (354)
Q Consensus 61 ~i~ViGDIHG~----~~~L----~~il~~~g~~~~~~~vfLGDyVDRG~~s~evl~ll~~Lk~~--~p~~v~lLrGNHE~ 130 (354)
+++++||+|-- ...+ ..+.+...-...+.+|++||++|.|....+--.+.-.++.. .+-.++.++||||.
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~GNHD~ 81 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDKAGIPYSVLAGNHDL 81 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCCcEEEECCCCcc
Confidence 57899999952 2223 33344433334567889999999998433221222222222 23458999999994
Q ss_pred hhhHhhhCChHHHHHHHhHHhHHHHhhhhhcCCceEEEcceEEEecCCCCCCCCCHHHhhccCCCCCCCCCCcccccccC
Q 018547 131 AKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALINEKILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWS 210 (354)
Q Consensus 131 ~~i~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaaii~~~il~vHgGisp~~~~l~~i~~i~Rp~~~~~~~~~~dlLWs 210 (354)
.. ...+.. ..+.++.+.+.++.-|- ..-++++|-=+.+.- -|.
T Consensus 82 ~~-~ld~~~--------~~~ql~WL~~~L~~~~~----~~~iv~~H~p~~~~~------------------------~~~ 124 (214)
T cd07399 82 VL-ALEFGP--------RDEVLQWANEVLKKHPD----RPAILTTHAYLNCDD------------------------SRP 124 (214)
T ss_pred hh-hCCCCC--------CHHHHHHHHHHHHHCCC----CCEEEEecccccCCC------------------------CcC
Confidence 32 111111 12333444444444331 134778887433210 010
Q ss_pred CCCCCCCCcccCCCCcceecChHHHHHHHHhC-CCceEEEeeeeecCCeEEe-----cCCeEEEEeeCCCCCCCCCCc-e
Q 018547 211 DPDANIEGWADSDRGVSCTFGSDVVADFLDKN-DLDLICRGHQVVEDGYEFF-----ARRRLVTIFSAPNYGGEFDNA-G 283 (354)
Q Consensus 211 DP~~~~~~~~~~~rg~g~~fG~~~~~~fL~~~-~l~~IIRgHq~v~~G~~~~-----~~~~~iTvfSa~~Y~~~~~N~-g 283 (354)
+. ...| ....-+.+.+.+.++++ ++++++-||.... +.... .++.+..+.+........+|. =
T Consensus 125 ~~---~~~~------~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~-~~~~~~~~~~~g~~v~~~~~~~q~~~~~g~~~~ 194 (214)
T cd07399 125 DS---IDYD------SDVNDGQQIWDKLVKKNDNVFMVLSGHVHGA-GRTTLVSVGDAGRTVHQMLADYQGEPNGGNGFL 194 (214)
T ss_pred cc---cccc------cccccHHHHHHHHHhCCCCEEEEEccccCCC-ceEEEcccCCCCCEeeEEeecccCCCCCCcceE
Confidence 00 0111 01123556788889888 7999999998763 33322 133455554433211111111 1
Q ss_pred eEEEecCC-ceeEEEEecC
Q 018547 284 ALLSVNES-LVCSFEILKP 301 (354)
Q Consensus 284 a~l~i~~~-~~~~~~~~~p 301 (354)
.++.++++ ..+.+..+.|
T Consensus 195 r~~~f~~~~~~i~~~tysp 213 (214)
T cd07399 195 RLLEFDPDNNKIDVRTYSP 213 (214)
T ss_pred EEEEEecCCCEEEEEeCCC
Confidence 45666666 3666666655
No 50
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=98.31 E-value=6.2e-06 Score=76.97 Aligned_cols=68 Identities=22% Similarity=0.148 Sum_probs=47.9
Q ss_pred cEEEEeCCCCCH------HHHHHHHHhCCCCCCCcEEeecCcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCchhh
Q 018547 61 PIRICGDVHGQY------QDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDA 131 (354)
Q Consensus 61 ~i~ViGDIHG~~------~~L~~il~~~g~~~~~~~vfLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~ 131 (354)
++.+++|+|+++ ..+.++++.+.-...+.+|+.||++++.+.+.+.+..+..+ .+..++++.||||..
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNHD~~ 74 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNHDML 74 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCCCCC
Confidence 478999999753 23556666554445677889999999876665555544432 345799999999964
No 51
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.23 E-value=3.9e-05 Score=68.76 Aligned_cols=160 Identities=17% Similarity=0.151 Sum_probs=96.5
Q ss_pred CcEEEEeCCCCCHHHHHHHHHhCCCCCCCcEEeecCcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCchhhhhHhhhCC
Q 018547 60 APIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGF 139 (354)
Q Consensus 60 ~~i~ViGDIHG~~~~L~~il~~~g~~~~~~~vfLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~i~~~~gf 139 (354)
+++.|++|.||...+..+..+.......+.+|.+||++....... +......+++.++||.|.....
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~~~~--------l~~~~~~~i~~V~GN~D~~~~~----- 68 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFTLDA--------LEGGLAAKLIAVRGNCDGEVDQ----- 68 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccchHH--------hhcccccceEEEEccCCCcccc-----
Confidence 689999999999976666666655556677889999997653211 1110246899999999986432
Q ss_pred hHHHHHHHhHHhHHHHhhhhhcCCceEE--Ec-ceEEEecCCCCCCCCCHHHhhccCCCCCCCCCCcccccccCCCCCCC
Q 018547 140 YDECKRRFNVRLWKIFTDCFNCLPVAAL--IN-EKILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANI 216 (354)
Q Consensus 140 ~~e~~~~~~~~~~~~~~~~f~~LPlaai--i~-~~il~vHgGisp~~~~l~~i~~i~Rp~~~~~~~~~~dlLWsDP~~~~ 216 (354)
..+|-..+ ++ -+++++||.....
T Consensus 69 --------------------~~~p~~~~~~~~g~ki~l~HGh~~~~---------------------------------- 94 (172)
T COG0622 69 --------------------EELPEELVLEVGGVKIFLTHGHLYFV---------------------------------- 94 (172)
T ss_pred --------------------ccCChhHeEEECCEEEEEECCCcccc----------------------------------
Confidence 22233222 23 4899999964320
Q ss_pred CCcccCCCCcceecChHHHHHHHHhCCCceEEEeeeeecCCeEEecCCeEEEEeeCCCCCCCCCCceeEEEecCC-ceeE
Q 018547 217 EGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVVEDGYEFFARRRLVTIFSAPNYGGEFDNAGALLSVNES-LVCS 295 (354)
Q Consensus 217 ~~~~~~~rg~g~~fG~~~~~~fL~~~~l~~IIRgHq~v~~G~~~~~~~~~iTvfSa~~Y~~~~~N~ga~l~i~~~-~~~~ 295 (354)
......++.+-+..+.+.+|.||+..+.=++. .+-.++-=-|.+.+-+ .+..+++.++.+ ..+.
T Consensus 95 ------------~~~~~~l~~la~~~~~Dvli~GHTH~p~~~~~-~~i~~vNPGS~s~pr~--~~~~sy~il~~~~~~~~ 159 (172)
T COG0622 95 ------------KTDLSLLEYLAKELGADVLIFGHTHKPVAEKV-GGILLVNPGSVSGPRG--GNPASYAILDVDNLEVE 159 (172)
T ss_pred ------------ccCHHHHHHHHHhcCCCEEEECCCCcccEEEE-CCEEEEcCCCcCCCCC--CCCcEEEEEEcCCCEEE
Confidence 12235567777788899999999998533222 1212222234554433 244345555443 4455
Q ss_pred EEEecC
Q 018547 296 FEILKP 301 (354)
Q Consensus 296 ~~~~~p 301 (354)
...+..
T Consensus 160 ~~~~~~ 165 (172)
T COG0622 160 VLFLER 165 (172)
T ss_pred EEEeec
Confidence 444443
No 52
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=98.04 E-value=0.00023 Score=67.92 Aligned_cols=70 Identities=16% Similarity=0.047 Sum_probs=47.6
Q ss_pred CcEEEEeCCC-C-----------CHHHHHHHHHhCCC--CCCCcEEeecCcccCCCCcHHHHHHHHHHHHhCCCcEEEeC
Q 018547 60 APIRICGDVH-G-----------QYQDLLRLFEHGGY--PPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLR 125 (354)
Q Consensus 60 ~~i~ViGDIH-G-----------~~~~L~~il~~~g~--~~~~~~vfLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLr 125 (354)
.+++.++|+| . ....|.++++.+.. ++.+-+|+.||++|.|. .+-+..+...-...+..++++.
T Consensus 15 ~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~--~~~~~~~~~~l~~l~~Pv~~v~ 92 (275)
T PRK11148 15 VRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS--SEAYQHFAEGIAPLRKPCVWLP 92 (275)
T ss_pred EEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC--HHHHHHHHHHHhhcCCcEEEeC
Confidence 5799999999 1 24667777776532 23467889999999874 3333333333233456799999
Q ss_pred CCchhh
Q 018547 126 GNHEDA 131 (354)
Q Consensus 126 GNHE~~ 131 (354)
||||..
T Consensus 93 GNHD~~ 98 (275)
T PRK11148 93 GNHDFQ 98 (275)
T ss_pred CCCCCh
Confidence 999974
No 53
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=98.00 E-value=1.3e-05 Score=76.59 Aligned_cols=70 Identities=19% Similarity=0.060 Sum_probs=50.4
Q ss_pred CcEEEEeCCCCC----HHHHHHHHHhCCCCCCCcEEeecCcccCC-C-CcHHHHHHHHHHHHhCCCcEEEeCCCchhh
Q 018547 60 APIRICGDVHGQ----YQDLLRLFEHGGYPPTANYLFLGDYVDRG-K-QSLETICLLLAYKIRYPDKIHLLRGNHEDA 131 (354)
Q Consensus 60 ~~i~ViGDIHG~----~~~L~~il~~~g~~~~~~~vfLGDyVDRG-~-~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~ 131 (354)
.++.+++|+|.. ...+.++++...-.+.+-+++.||++|++ + ...++...+..++.. ..++.+.||||..
T Consensus 50 ~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~~--~pv~~V~GNHD~~ 125 (271)
T PRK11340 50 FKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFSDVLSPLAEC--APTFACFGNHDRP 125 (271)
T ss_pred cEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCccccHHHHHHHHHHHhhc--CCEEEecCCCCcc
Confidence 579999999976 55677777765545567788999999954 2 333455556556543 3599999999974
No 54
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=97.99 E-value=0.00021 Score=64.68 Aligned_cols=70 Identities=13% Similarity=0.006 Sum_probs=44.4
Q ss_pred CcEEEEeCCCCCHH------------HHHHHHHhCCCCCCCcEEeecCcccCCCCc---HHHHHHHHHHHHhCCCcEEEe
Q 018547 60 APIRICGDVHGQYQ------------DLLRLFEHGGYPPTANYLFLGDYVDRGKQS---LETICLLLAYKIRYPDKIHLL 124 (354)
Q Consensus 60 ~~i~ViGDIHG~~~------------~L~~il~~~g~~~~~~~vfLGDyVDRG~~s---~evl~ll~~Lk~~~p~~v~lL 124 (354)
.++.+++|+|-... .+..+.+.+.....+.+|++||+++.+... .+.+..++.......-.++++
T Consensus 3 ~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~ 82 (199)
T cd07383 3 FKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAAT 82 (199)
T ss_pred eEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEEE
Confidence 46899999996221 112222222223446788999999977653 555555554433345578999
Q ss_pred CCCch
Q 018547 125 RGNHE 129 (354)
Q Consensus 125 rGNHE 129 (354)
.||||
T Consensus 83 ~GNHD 87 (199)
T cd07383 83 FGNHD 87 (199)
T ss_pred CccCC
Confidence 99999
No 55
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=97.95 E-value=1.6e-05 Score=72.65 Aligned_cols=71 Identities=25% Similarity=0.194 Sum_probs=51.4
Q ss_pred CcEEEEeCCCCCHH----HHHHHHHhCCCCCCCcEEeecCcccCCCCcH-HHHHHHHHHHHhCCCcEEEeCCCchhhh
Q 018547 60 APIRICGDVHGQYQ----DLLRLFEHGGYPPTANYLFLGDYVDRGKQSL-ETICLLLAYKIRYPDKIHLLRGNHEDAK 132 (354)
Q Consensus 60 ~~i~ViGDIHG~~~----~L~~il~~~g~~~~~~~vfLGDyVDRG~~s~-evl~ll~~Lk~~~p~~v~lLrGNHE~~~ 132 (354)
+++.+++|+|+... .+.++++.+.....+.+++.||++|.+.... +...++..+ ..+..++.+.||||...
T Consensus 2 ~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~l~~l--~~~~~v~~v~GNHD~~~ 77 (223)
T cd07385 2 LRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVLELLLELLKKL--KAPLGVYAVLGNHDYYS 77 (223)
T ss_pred CEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhhHHHHHHHhcc--CCCCCEEEECCCccccc
Confidence 57999999998643 6677776655444567889999999987765 444444333 23457999999999854
No 56
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=97.90 E-value=0.00059 Score=64.26 Aligned_cols=71 Identities=13% Similarity=0.013 Sum_probs=43.5
Q ss_pred cEEEEeCCCCCH----------------HHHHHHHHhCCC--CCCCcEEeecCcccCCCCcH---HHHHHHHH-HHH-hC
Q 018547 61 PIRICGDVHGQY----------------QDLLRLFEHGGY--PPTANYLFLGDYVDRGKQSL---ETICLLLA-YKI-RY 117 (354)
Q Consensus 61 ~i~ViGDIHG~~----------------~~L~~il~~~g~--~~~~~~vfLGDyVDRG~~s~---evl~ll~~-Lk~-~~ 117 (354)
+++++||+|-.. ..|.++++.+.. +..+.++++||+++.|...- +....+.. ++. ..
T Consensus 6 ~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (262)
T cd07395 6 YFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSLLDP 85 (262)
T ss_pred EEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhhccC
Confidence 477888888653 234556665432 24456889999999887542 11222222 221 12
Q ss_pred CCcEEEeCCCchhh
Q 018547 118 PDKIHLLRGNHEDA 131 (354)
Q Consensus 118 p~~v~lLrGNHE~~ 131 (354)
+-.++.+.||||..
T Consensus 86 ~vp~~~i~GNHD~~ 99 (262)
T cd07395 86 DIPLVCVCGNHDVG 99 (262)
T ss_pred CCcEEEeCCCCCCC
Confidence 34699999999974
No 57
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=97.83 E-value=4e-06 Score=84.66 Aligned_cols=243 Identities=13% Similarity=-0.044 Sum_probs=164.0
Q ss_pred ccCCHHHHHHHHHHHHHHHhhCCCeeeecC----cEEEEeCCCCCHHHHHHHHHhCCCCCC-CcEEeecCcccCCCCcHH
Q 018547 31 VQLSESEIRQLCVNARQIFLSQPNLVEVEA----PIRICGDVHGQYQDLLRLFEHGGYPPT-ANYLFLGDYVDRGKQSLE 105 (354)
Q Consensus 31 ~~l~~~~i~~l~~~a~~il~~ep~vl~l~~----~i~ViGDIHG~~~~L~~il~~~g~~~~-~~~vfLGDyVDRG~~s~e 105 (354)
..|...++..+++.+.+++..+|+...... -.+.++|.||.+.|+.++++.- |.. .-|++-|++++++....+
T Consensus 13 ~~l~~~~fd~avdlysKaI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie~d--P~~~K~Y~rrg~a~m~l~~~~~ 90 (476)
T KOG0376|consen 13 EALKDKVFDVAVDLYSKAIELDPNCAIYFANRALAHLKVESFGGALHDALKAIELD--PTYIKAYVRRGTAVMALGEFKK 90 (476)
T ss_pred hhcccchHHHHHHHHHHHHhcCCcceeeechhhhhheeechhhhHHHHHHhhhhcC--chhhheeeeccHHHHhHHHHHH
Confidence 356678889999999999999998888743 3789999999999999998863 333 459999999999999999
Q ss_pred HHHHHHHHHHhCCCcEEEeCCCchhhhhHhhhCChHHHHHHHhH---HhHHHHhhhhhcCCceEEEcceEEEecCCCCC-
Q 018547 106 TICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFNV---RLWKIFTDCFNCLPVAALINEKILCMHGGLSP- 181 (354)
Q Consensus 106 vl~ll~~Lk~~~p~~v~lLrGNHE~~~i~~~~gf~~e~~~~~~~---~~~~~~~~~f~~LPlaaii~~~il~vHgGisp- 181 (354)
.+..+...+...|+...+.|++||+..+-..++|..+....++. .+...+...+.. |++....+.+ .-+.-++-
T Consensus 91 A~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~~d~~s~~~~~~~~~~~~-~i~~~y~g~~-le~~kvt~e 168 (476)
T KOG0376|consen 91 ALLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPEGDKKSVVEMKIDEEDMD-LIESDYSGPV-LEDHKVTLE 168 (476)
T ss_pred HHHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCccCCcccccccccccccc-ccccccCCcc-cccchhhHH
Confidence 99999999999999999999999999998888888666555521 122222221111 1333333222 11111110
Q ss_pred -------------CC------CCHHHhhccCCCCCCC-CCCcccccccCCCCCCCCCcccCCCCcceecChHHHHHHHHh
Q 018547 182 -------------EL------ENLDQIRNISRPTDIP-DNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDK 241 (354)
Q Consensus 182 -------------~~------~~l~~i~~i~Rp~~~~-~~~~~~dlLWsDP~~~~~~~~~~~rg~g~~fG~~~~~~fL~~ 241 (354)
.+ .-+++..++.|-+..+ +...-.+..||++......+.+..++.+...++.....||..
T Consensus 169 ~vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ylfn 248 (476)
T KOG0376|consen 169 FVKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPYLFN 248 (476)
T ss_pred HHHHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCccccccc
Confidence 00 0011111111111111 111446778999876555566667888888889999999999
Q ss_pred CCCceEEEeeeeec------------CCeEEecC---CeEEEEeeCCCCCC
Q 018547 242 NDLDLICRGHQVVE------------DGYEFFAR---RRLVTIFSAPNYGG 277 (354)
Q Consensus 242 ~~l~~IIRgHq~v~------------~G~~~~~~---~~~iTvfSa~~Y~~ 277 (354)
.+..-+.+.+.-+. .+|....+ +.+.++|+++.+|.
T Consensus 249 gdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~ 299 (476)
T KOG0376|consen 249 GDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVK 299 (476)
T ss_pred CceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchh
Confidence 99888888886532 22222221 34889999999884
No 58
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=97.77 E-value=0.00046 Score=64.31 Aligned_cols=46 Identities=7% Similarity=-0.041 Sum_probs=32.3
Q ss_pred ChHHHHHHHHhCCCceEEEeeeeecCCeE---EecCCeEEEEeeCCCCCCC
Q 018547 231 GSDVVADFLDKNDLDLICRGHQVVEDGYE---FFARRRLVTIFSAPNYGGE 278 (354)
Q Consensus 231 G~~~~~~fL~~~~l~~IIRgHq~v~~G~~---~~~~~~~iTvfSa~~Y~~~ 278 (354)
+.+.+.+.+++.++++++-||.....-.. ...+| ++.+++|.-|..
T Consensus 181 ~~~~~~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~~g--i~~~~~~~~~~~ 229 (232)
T cd07393 181 DDSPISKLIEEYGVDICVYGHLHGVGRDRAINGERGG--IRYQLVSADYLN 229 (232)
T ss_pred CHHHHHHHHHHcCCCEEEECCCCCCcccccccceECC--EEEEEEcchhcC
Confidence 44567888888999999999998654333 12344 677887776654
No 59
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.69 E-value=0.00011 Score=69.78 Aligned_cols=73 Identities=22% Similarity=0.243 Sum_probs=49.6
Q ss_pred cEEEEeCCC-C------------CHHHHHHHHHhCCCCCCCcEEeecCcccCCCC-cHHHHHHHHHHHHhCCCcEEEeCC
Q 018547 61 PIRICGDVH-G------------QYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQ-SLETICLLLAYKIRYPDKIHLLRG 126 (354)
Q Consensus 61 ~i~ViGDIH-G------------~~~~L~~il~~~g~~~~~~~vfLGDyVDRG~~-s~evl~ll~~Lk~~~p~~v~lLrG 126 (354)
++.+++|+| + ....+.++++.+.....+.+|++||+++.|.. +.+-+..+.+.-...+-.++.+.|
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v~G 81 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHVLG 81 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEecC
Confidence 588999999 2 24566777776644445678899999998873 223344443332333457999999
Q ss_pred Cchhhhh
Q 018547 127 NHEDAKI 133 (354)
Q Consensus 127 NHE~~~i 133 (354)
|||....
T Consensus 82 NHD~~~~ 88 (267)
T cd07396 82 NHDLYNP 88 (267)
T ss_pred ccccccc
Confidence 9998643
No 60
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.58 E-value=0.00014 Score=71.67 Aligned_cols=72 Identities=24% Similarity=0.318 Sum_probs=49.3
Q ss_pred CcEEEEeCCC-C-----------CHHHHHHHHHhCCCCCCCcEEeecCcccCC-CCcHHHHHHHHH--HH--HhCCCcEE
Q 018547 60 APIRICGDVH-G-----------QYQDLLRLFEHGGYPPTANYLFLGDYVDRG-KQSLETICLLLA--YK--IRYPDKIH 122 (354)
Q Consensus 60 ~~i~ViGDIH-G-----------~~~~L~~il~~~g~~~~~~~vfLGDyVDRG-~~s~evl~ll~~--Lk--~~~p~~v~ 122 (354)
|+++.++|+| | +...|.++++.+.-...+.+|+.||++|+. +.+.+++.++.. ++ ...+-.++
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~ 80 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITLH 80 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeEE
Confidence 5789999999 4 234556666655445567888999999985 455555544433 21 22355799
Q ss_pred EeCCCchhh
Q 018547 123 LLRGNHEDA 131 (354)
Q Consensus 123 lLrGNHE~~ 131 (354)
++.||||..
T Consensus 81 ~I~GNHD~~ 89 (340)
T PHA02546 81 VLVGNHDMY 89 (340)
T ss_pred EEccCCCcc
Confidence 999999974
No 61
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=97.57 E-value=0.0021 Score=60.25 Aligned_cols=74 Identities=20% Similarity=0.214 Sum_probs=52.6
Q ss_pred CcEEEEeCCCCC------HHHHHHHHHhCCCCCCCcEEeecCcccCCCCcHHHHHHHHHHH--HhCCCcEEEeCCCchhh
Q 018547 60 APIRICGDVHGQ------YQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYK--IRYPDKIHLLRGNHEDA 131 (354)
Q Consensus 60 ~~i~ViGDIHG~------~~~L~~il~~~g~~~~~~~vfLGDyVDRG~~s~evl~ll~~Lk--~~~p~~v~lLrGNHE~~ 131 (354)
++++.|+|+|-- ...+.++++.+...+.+-+|+.||+.+.|. .+-...+..+- ...+..+++++||||..
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~~--~~~~~~~~~~l~~~~~~~~~~~vpGNHD~~ 78 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDGE--PEEYRRLKELLARLELPAPVIVVPGNHDAR 78 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCCCC--HHHHHHHHHHHhhccCCCceEeeCCCCcCC
Confidence 468899999976 345566677777666688999999999962 22233333332 36678899999999998
Q ss_pred hhHh
Q 018547 132 KINR 135 (354)
Q Consensus 132 ~i~~ 135 (354)
..+.
T Consensus 79 ~~~~ 82 (301)
T COG1409 79 VVNG 82 (301)
T ss_pred chHH
Confidence 7653
No 62
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=97.50 E-value=0.00033 Score=64.67 Aligned_cols=69 Identities=26% Similarity=0.284 Sum_probs=46.0
Q ss_pred cEEEEeCCCCC------------HHHHHHHHHhCCCC--CCCcEEeecCcccCCCCcHHHHHHHHHHHHhCCCcEEEeCC
Q 018547 61 PIRICGDVHGQ------------YQDLLRLFEHGGYP--PTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRG 126 (354)
Q Consensus 61 ~i~ViGDIHG~------------~~~L~~il~~~g~~--~~~~~vfLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrG 126 (354)
++++++|+|=. ...|.++++.+... +.+-+|++||+++.|.. +....+.......+-.++.++|
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~--~~~~~~~~~l~~~~~p~~~v~G 78 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSP--ESYERLRELLAALPIPVYLLPG 78 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCH--HHHHHHHHHHhhcCCCEEEeCC
Confidence 57899999944 34567777754433 45678899999998753 2222232222233567899999
Q ss_pred Cchhh
Q 018547 127 NHEDA 131 (354)
Q Consensus 127 NHE~~ 131 (354)
|||..
T Consensus 79 NHD~~ 83 (240)
T cd07402 79 NHDDR 83 (240)
T ss_pred CCCCH
Confidence 99974
No 63
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.48 E-value=0.00024 Score=67.87 Aligned_cols=71 Identities=20% Similarity=0.339 Sum_probs=45.7
Q ss_pred EEEEeCCCCCHHHHHHHHHh---CCCCCCCcEEeecCcccCCCCc-HHHHH------HHH---HH---HHhCCCcEEEeC
Q 018547 62 IRICGDVHGQYQDLLRLFEH---GGYPPTANYLFLGDYVDRGKQS-LETIC------LLL---AY---KIRYPDKIHLLR 125 (354)
Q Consensus 62 i~ViGDIHG~~~~L~~il~~---~g~~~~~~~vfLGDyVDRG~~s-~evl~------ll~---~L---k~~~p~~v~lLr 125 (354)
|+|+||+||+++.+.+.++. ....+.+-+|++||+-..+..+ .+.+. -+. ++ ....|--++++-
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~ 80 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIG 80 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEEC
Confidence 58999999999998765443 2234567788999997544332 32221 111 11 223566689999
Q ss_pred CCchhhh
Q 018547 126 GNHEDAK 132 (354)
Q Consensus 126 GNHE~~~ 132 (354)
||||...
T Consensus 81 GNHE~~~ 87 (262)
T cd00844 81 GNHEASN 87 (262)
T ss_pred CCCCCHH
Confidence 9999743
No 64
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.47 E-value=0.00032 Score=62.22 Aligned_cols=58 Identities=19% Similarity=0.118 Sum_probs=34.2
Q ss_pred HHHHHHhCCCCCCCcEEeecCcccCCCCcH-HHHHHH-HHHHHhCCCcEEEeCCCchhhh
Q 018547 75 LLRLFEHGGYPPTANYLFLGDYVDRGKQSL-ETICLL-LAYKIRYPDKIHLLRGNHEDAK 132 (354)
Q Consensus 75 L~~il~~~g~~~~~~~vfLGDyVDRG~~s~-evl~ll-~~Lk~~~p~~v~lLrGNHE~~~ 132 (354)
+.++.+.+...+.+.+|++||++|....+. +....+ +......+..+++++||||...
T Consensus 30 ~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~GNHD~~~ 89 (172)
T cd07391 30 LERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEVAFLRLLAKDVDVILIRGNHDGGL 89 (172)
T ss_pred HHHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHHHHHHhccCCCeEEEEcccCccch
Confidence 344444433344578999999998654332 211111 1112234558999999999854
No 65
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=97.45 E-value=0.02 Score=53.31 Aligned_cols=205 Identities=20% Similarity=0.225 Sum_probs=117.6
Q ss_pred cCcEEEEeCCCCCHHHHHHHHHhCCCCCCCcEEeecCcc--cCCCCcHHHHHH-HHHHHHhCCCcEEEeCCCchhhhhHh
Q 018547 59 EAPIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYV--DRGKQSLETICL-LLAYKIRYPDKIHLLRGNHEDAKINR 135 (354)
Q Consensus 59 ~~~i~ViGDIHG~~~~L~~il~~~g~~~~~~~vfLGDyV--DRG~~s~evl~l-l~~Lk~~~p~~v~lLrGNHE~~~i~~ 135 (354)
.+++..+.|+||.++.+.++++.......+.+++.||+. +.|+.-.-.-.. +..++ .....++.+.||.|...+-.
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~~~~~~~~e~l~-~~~~~v~avpGNcD~~~v~~ 81 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEVAEELNKLEALK-ELGIPVLAVPGNCDPPEVID 81 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchHHHHhhhHHHHHH-hcCCeEEEEcCCCChHHHHH
Confidence 478999999999999999999988766677888999999 887643322221 33333 34568999999998876542
Q ss_pred hhCChHHHHHHHhHHhHHHHhhhhhcCCceEEEcceEEEecCCCCCCC-C-----CHHHhhccCCCC-CCCCCCcccccc
Q 018547 136 IYGFYDECKRRFNVRLWKIFTDCFNCLPVAALINEKILCMHGGLSPEL-E-----NLDQIRNISRPT-DIPDNGLLCDLL 208 (354)
Q Consensus 136 ~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaaii~~~il~vHgGisp~~-~-----~l~~i~~i~Rp~-~~~~~~~~~dlL 208 (354)
.. +..+..+. +-...+++-.+|-=||..|.. . +-++|....+.. +...+..---++
T Consensus 82 ~l-------~~~~~~v~----------~~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~~~~~Il~~ 144 (226)
T COG2129 82 VL-------KNAGVNVH----------GRVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKADNPVNILLT 144 (226)
T ss_pred HH-------Hhcccccc----------cceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhcccCcceEEEe
Confidence 11 11111111 112233333344446665532 1 233343222211 000000000011
Q ss_pred cCCCCCCCCCcccCCCCcceecChHHHHHHHHhCCCceEEEeeeeecCCeEEecCCeEEEEeeCCCCCCCCCCceeEEEe
Q 018547 209 WSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVVEDGYEFFARRRLVTIFSAPNYGGEFDNAGALLSV 288 (354)
Q Consensus 209 WsDP~~~~~~~~~~~rg~g~~fG~~~~~~fL~~~~l~~IIRgHq~v~~G~~~~~~~~~iTvfSa~~Y~~~~~N~ga~l~i 288 (354)
-+-|-... ..++-| -..-|..+++++.++.+-.+.+.||=....|.+--.+ ||+-.|.-.+ .-..|++.+
T Consensus 145 HaPP~gt~---~d~~~g-~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~iG~----TivVNPG~~~--~g~yA~i~l 214 (226)
T COG2129 145 HAPPYGTL---LDTPSG-YVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDKIGN----TIVVNPGPLG--EGRYALIEL 214 (226)
T ss_pred cCCCCCcc---ccCCCC-ccccchHHHHHHHHHhCCceEEEeeecccccccccCC----eEEECCCCcc--CceEEEEEe
Confidence 11221110 012222 1245899999999999999999999887778765333 5666664432 356788888
Q ss_pred cCC
Q 018547 289 NES 291 (354)
Q Consensus 289 ~~~ 291 (354)
+++
T Consensus 215 ~~~ 217 (226)
T COG2129 215 EKE 217 (226)
T ss_pred cCc
Confidence 776
No 66
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=97.45 E-value=0.00026 Score=67.08 Aligned_cols=73 Identities=23% Similarity=0.216 Sum_probs=49.1
Q ss_pred CcEEEEeCCCC-C-----------HHHHHHHHHhCCCCCCCcEEeecCcccCCCCcHHHHH----HHHHHHHhCCCcEEE
Q 018547 60 APIRICGDVHG-Q-----------YQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETIC----LLLAYKIRYPDKIHL 123 (354)
Q Consensus 60 ~~i~ViGDIHG-~-----------~~~L~~il~~~g~~~~~~~vfLGDyVDRG~~s~evl~----ll~~Lk~~~p~~v~l 123 (354)
|+++.++|+|- . ...|.++++.+.....+.+++.||++|+...+.+... ++..|+...|-.+++
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~ 80 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVV 80 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEE
Confidence 57899999993 2 2345555555444456778899999999866655433 333343333357999
Q ss_pred eCCCchhhh
Q 018547 124 LRGNHEDAK 132 (354)
Q Consensus 124 LrGNHE~~~ 132 (354)
+.||||...
T Consensus 81 i~GNHD~~~ 89 (253)
T TIGR00619 81 ISGNHDSAQ 89 (253)
T ss_pred EccCCCChh
Confidence 999999853
No 67
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=97.42 E-value=0.00042 Score=62.99 Aligned_cols=29 Identities=21% Similarity=0.164 Sum_probs=22.6
Q ss_pred ChHHHHHHHHhCCCceEEEeeeeecCCeE
Q 018547 231 GSDVVADFLDKNDLDLICRGHQVVEDGYE 259 (354)
Q Consensus 231 G~~~~~~fL~~~~l~~IIRgHq~v~~G~~ 259 (354)
.++.+.+.++..+.+.+|.||+..+.-.+
T Consensus 177 ~~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 205 (217)
T cd07398 177 FEEAVARLARRKGVDGVICGHTHRPALHE 205 (217)
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCCCeEE
Confidence 45667777889999999999998764433
No 68
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=97.38 E-value=0.0015 Score=57.38 Aligned_cols=47 Identities=28% Similarity=0.286 Sum_probs=29.6
Q ss_pred CCCcEEeecCcccCCCCc-HHHH-HHHHHHHHh---C-CCcEEEeCCCchhhh
Q 018547 86 PTANYLFLGDYVDRGKQS-LETI-CLLLAYKIR---Y-PDKIHLLRGNHEDAK 132 (354)
Q Consensus 86 ~~~~~vfLGDyVDRG~~s-~evl-~ll~~Lk~~---~-p~~v~lLrGNHE~~~ 132 (354)
..+.+|++||++|.+..+ .+.. ..+..++.. . +..++++.||||...
T Consensus 38 ~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~~ 90 (156)
T cd08165 38 QPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIGF 90 (156)
T ss_pred CCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcCC
Confidence 456789999999987643 2222 222223222 1 346999999999743
No 69
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.34 E-value=0.00041 Score=62.96 Aligned_cols=73 Identities=22% Similarity=0.281 Sum_probs=49.1
Q ss_pred cEEEEeCCC-CC--------------HHHHHHHHHhCCCCCCCcEEeecCcccCCCCcHHHHHHHHHHHHh---CCCcEE
Q 018547 61 PIRICGDVH-GQ--------------YQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIR---YPDKIH 122 (354)
Q Consensus 61 ~i~ViGDIH-G~--------------~~~L~~il~~~g~~~~~~~vfLGDyVDRG~~s~evl~ll~~Lk~~---~p~~v~ 122 (354)
+++.++|+| |. +..|.++++.+.....+.+|+.||++|....+.+.+..+...-.. ..-.++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVF 80 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 578999999 32 223666666554445567889999999887665544444333222 245799
Q ss_pred EeCCCchhhhh
Q 018547 123 LLRGNHEDAKI 133 (354)
Q Consensus 123 lLrGNHE~~~i 133 (354)
++.||||....
T Consensus 81 ~~~GNHD~~~~ 91 (223)
T cd00840 81 IIAGNHDSPSR 91 (223)
T ss_pred EecCCCCCccc
Confidence 99999998654
No 70
>PRK04036 DNA polymerase II small subunit; Validated
Probab=97.30 E-value=0.00053 Score=71.29 Aligned_cols=113 Identities=19% Similarity=0.235 Sum_probs=59.9
Q ss_pred cCcEEEEeCCC-CCH----HHHHHHHHhCC-C--------CCCCcEEeecCcccC-CCCc---------------HHHHH
Q 018547 59 EAPIRICGDVH-GQY----QDLLRLFEHGG-Y--------PPTANYLFLGDYVDR-GKQS---------------LETIC 108 (354)
Q Consensus 59 ~~~i~ViGDIH-G~~----~~L~~il~~~g-~--------~~~~~~vfLGDyVDR-G~~s---------------~evl~ 108 (354)
+..+++++|+| |.- ..+..+++.+. . ...+.+|++||++|. |..+ -++..
T Consensus 243 ~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~ 322 (504)
T PRK04036 243 KVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAE 322 (504)
T ss_pred ccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHH
Confidence 35699999999 642 23444444322 1 223578899999995 3221 12333
Q ss_pred HHHHHHHhCCCcEEEeCCCchhhhhHhhh-CChHHHHHHHhHHhHHH-HhhhhhcCCceEEEcc-eEEEecCCC
Q 018547 109 LLLAYKIRYPDKIHLLRGNHEDAKINRIY-GFYDECKRRFNVRLWKI-FTDCFNCLPVAALINE-KILCMHGGL 179 (354)
Q Consensus 109 ll~~Lk~~~p~~v~lLrGNHE~~~i~~~~-gf~~e~~~~~~~~~~~~-~~~~f~~LPlaaii~~-~il~vHgGi 179 (354)
+|..+. ..-.|++++||||........ .+..... ..+.. -..++.. |....+++ +++++||-.
T Consensus 323 ~L~~L~--~~i~V~~ipGNHD~~~~~lPQ~~l~~~l~-----~~l~~~~v~~lsN-P~~i~l~G~~iLl~HG~~ 388 (504)
T PRK04036 323 YLKQIP--EDIKIIISPGNHDAVRQAEPQPAFPEEIR-----SLFPEHNVTFVSN-PALVNLHGVDVLIYHGRS 388 (504)
T ss_pred HHHhhh--cCCeEEEecCCCcchhhccCCCCccHHHH-----HhcCcCCeEEecC-CeEEEECCEEEEEECCCC
Confidence 443332 234799999999976432111 1211111 11111 1233333 65444454 789999953
No 71
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.26 E-value=0.0013 Score=61.50 Aligned_cols=197 Identities=18% Similarity=0.222 Sum_probs=102.1
Q ss_pred EEeCCCCC------HHHHHHHHHhCCCCCCCcEEeecCcccC--CCC-----cHHHHHHHHHHHHhCCCcEEEeCCCchh
Q 018547 64 ICGDVHGQ------YQDLLRLFEHGGYPPTANYLFLGDYVDR--GKQ-----SLETICLLLAYKIRYPDKIHLLRGNHED 130 (354)
Q Consensus 64 ViGDIHG~------~~~L~~il~~~g~~~~~~~vfLGDyVDR--G~~-----s~evl~ll~~Lk~~~p~~v~lLrGNHE~ 130 (354)
.|+|+|=. -+.|.++++... +..+.+.+|||++|- |.+ --+|...|..+ ...+.+++.+.||||.
T Consensus 2 FISDlHL~~~~p~~t~~fl~Fl~~~a-~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~-a~~G~~v~~i~GN~Df 79 (237)
T COG2908 2 FISDLHLGPKRPALTAFFLDFLREEA-AQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRL-ARKGTRVYYIHGNHDF 79 (237)
T ss_pred eeeccccCCCCcHHHHHHHHHHHhcc-ccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHH-HhcCCeEEEecCchHH
Confidence 58899854 344556666533 245678889999972 322 13344444333 3457799999999995
Q ss_pred hhhHhhhCChHHHHHHHhHHhHHHHhhhhhcCCceEEE---cceEEEecCCCCCCC-CC-----------HHHhhccCCC
Q 018547 131 AKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALI---NEKILCMHGGLSPEL-EN-----------LDQIRNISRP 195 (354)
Q Consensus 131 ~~i~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaaii---~~~il~vHgGisp~~-~~-----------l~~i~~i~Rp 195 (354)
.. ...+ ..-..-+.-+|-..++ +.+++.+||-.--.. .. ..+..-+..|
T Consensus 80 ll-~~~f---------------~~~~g~~~l~~~~~~~~l~g~~~Ll~HGD~f~t~~~~y~~~r~~~~~~~~~~lflnl~ 143 (237)
T COG2908 80 LL-GKRF---------------AQEAGGMTLLPDPIVLDLYGKRILLAHGDTFCTDDRAYQWFRYKVHWAWLQLLFLNLP 143 (237)
T ss_pred HH-HHHH---------------HhhcCceEEcCcceeeeecCcEEEEEeCCcccchHHHHHHHHHHcccHHHHHHHHHhH
Confidence 43 2211 1111112344544444 368999999642211 00 0111111111
Q ss_pred CCCCCCCcccccccCCCCCCCCCcccCCCCcce---ecChHHHHHHHHhCCCceEEEeeeeecCCeEEecCCeEEEEeeC
Q 018547 196 TDIPDNGLLCDLLWSDPDANIEGWADSDRGVSC---TFGSDVVADFLDKNDLDLICRGHQVVEDGYEFFARRRLVTIFSA 272 (354)
Q Consensus 196 ~~~~~~~~~~dlLWsDP~~~~~~~~~~~rg~g~---~fG~~~~~~fL~~~~l~~IIRgHq~v~~G~~~~~~~~~iTvfSa 272 (354)
+. - ...+..-+|+.- .|......... ...+.++.+-++++|++.+|.||+..+..-....-.++.
T Consensus 144 l~-~-R~ri~~k~r~~s-----~~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~~i~~~~yi~----- 211 (237)
T COG2908 144 LR-V-RRRIAYKIRSLS-----SWAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIHNIPGITYIN----- 211 (237)
T ss_pred HH-H-HHHHHHHHHHhh-----HHhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhccCCCceEEe-----
Confidence 11 0 001112234333 12222111111 235677888899999999999999987554443211111
Q ss_pred CCCCCCCCCceeEEEecCCce
Q 018547 273 PNYGGEFDNAGALLSVNESLV 293 (354)
Q Consensus 273 ~~Y~~~~~N~ga~l~i~~~~~ 293 (354)
||.-...|++++++.+..
T Consensus 212 ---lGdW~~~~s~~~v~~~~~ 229 (237)
T COG2908 212 ---LGDWVSEGSILEVDDGGL 229 (237)
T ss_pred ---cCcchhcceEEEEecCcE
Confidence 122335678888877654
No 72
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.25 E-value=0.00067 Score=68.69 Aligned_cols=72 Identities=22% Similarity=0.291 Sum_probs=46.6
Q ss_pred CcEEEEeCCC-CC-H------HH----HHHHHHhCCCCCCCcEEeecCcccCCCCcHHHH----HHHHHHHHhCCCcEEE
Q 018547 60 APIRICGDVH-GQ-Y------QD----LLRLFEHGGYPPTANYLFLGDYVDRGKQSLETI----CLLLAYKIRYPDKIHL 123 (354)
Q Consensus 60 ~~i~ViGDIH-G~-~------~~----L~~il~~~g~~~~~~~vfLGDyVDRG~~s~evl----~ll~~Lk~~~p~~v~l 123 (354)
++++.++|+| |. + .+ |.++.+.+.....+.+|+.||++|++..+.+.. .++..++. .+-.+++
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~-~~~~v~~ 79 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQ-TGCQLVV 79 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHh-cCCcEEE
Confidence 5789999999 32 1 11 334444444455677889999999986655432 23333432 2457999
Q ss_pred eCCCchhhh
Q 018547 124 LRGNHEDAK 132 (354)
Q Consensus 124 LrGNHE~~~ 132 (354)
+.||||...
T Consensus 80 I~GNHD~~~ 88 (407)
T PRK10966 80 LAGNHDSVA 88 (407)
T ss_pred EcCCCCChh
Confidence 999999854
No 73
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.21 E-value=0.0011 Score=61.95 Aligned_cols=72 Identities=17% Similarity=0.182 Sum_probs=43.6
Q ss_pred CcEEEEeCCC-CCHHH----------------HHHHHHhCCCCCCCcEEeecCcccCCCCcHHHHHHHHHHHHhCCCcEE
Q 018547 60 APIRICGDVH-GQYQD----------------LLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIH 122 (354)
Q Consensus 60 ~~i~ViGDIH-G~~~~----------------L~~il~~~g~~~~~~~vfLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~ 122 (354)
.++.||+|+| |--.. |.++.+.......+.+|++||+++..... .....+.++.......++
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~-~~~~~~~~~l~~~~~~v~ 93 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKG-LEWRFIREFIEVTFRDLI 93 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCCh-HHHHHHHHHHHhcCCcEE
Confidence 6789999999 53222 33333333333457899999999765543 222222222111234799
Q ss_pred EeCCCchhhh
Q 018547 123 LLRGNHEDAK 132 (354)
Q Consensus 123 lLrGNHE~~~ 132 (354)
+++||||...
T Consensus 94 ~V~GNHD~~~ 103 (225)
T TIGR00024 94 LIRGNHDALI 103 (225)
T ss_pred EECCCCCCcc
Confidence 9999999754
No 74
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=97.21 E-value=0.006 Score=64.03 Aligned_cols=72 Identities=22% Similarity=0.306 Sum_probs=49.5
Q ss_pred ChHHHHHHHHhCCCc----eEEEeeeeec--CCeEE-ecCCeEEEE---eeCCCCCCCCCCceeEEEecCCceeEEEEec
Q 018547 231 GSDVVADFLDKNDLD----LICRGHQVVE--DGYEF-FARRRLVTI---FSAPNYGGEFDNAGALLSVNESLVCSFEILK 300 (354)
Q Consensus 231 G~~~~~~fL~~~~l~----~IIRgHq~v~--~G~~~-~~~~~~iTv---fSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~ 300 (354)
.++..++.|+.+|++ .||-||.||. +|=.. -++||++.| ||.+ |-...+ .|.+-.|...-.......+
T Consensus 507 ~e~~c~~IL~EFgl~~~~~hIINGHvPVk~k~GEsPIKa~Gkl~VIDGGfskA-Yqk~TG-IAGYTLiyNS~gl~L~~H~ 584 (640)
T PF06874_consen 507 DEEICDKILEEFGLDPERGHIINGHVPVKVKKGESPIKANGKLIVIDGGFSKA-YQKTTG-IAGYTLIYNSYGLQLVAHQ 584 (640)
T ss_pred CHHHHHHHHHHhCCCCCCCeEECCccccccCCCCCCccCCCEEEEEcChhhhh-hccccC-ccceEEEecCCcceeccCC
Confidence 456677899999998 9999999986 56543 478999998 7766 555433 4444555555455555555
Q ss_pred CCCC
Q 018547 301 PADK 304 (354)
Q Consensus 301 p~~~ 304 (354)
|-++
T Consensus 585 pF~s 588 (640)
T PF06874_consen 585 PFES 588 (640)
T ss_pred CCCC
Confidence 6443
No 75
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.13 E-value=0.00082 Score=59.44 Aligned_cols=67 Identities=27% Similarity=0.380 Sum_probs=43.0
Q ss_pred EEEEeCCCCCHHHH---------------HHHHHhCC--CCCCCcEEeecCcccCCCCcHHHHHHHHHHHHhCCCcEEEe
Q 018547 62 IRICGDVHGQYQDL---------------LRLFEHGG--YPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLL 124 (354)
Q Consensus 62 i~ViGDIHG~~~~L---------------~~il~~~g--~~~~~~~vfLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lL 124 (354)
+++++|+|=..... .++++... ..+.+.++++||++++|..+.. +..+.+ .+..++++
T Consensus 1 ~~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~~~-~~~l~~----~~~~~~~v 75 (168)
T cd07390 1 IYFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAGTE-LELLSR----LNGRKHLI 75 (168)
T ss_pred CeEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChHHH-HHHHHh----CCCCeEEE
Confidence 36889998654432 12232211 2345789999999999986643 333332 34579999
Q ss_pred CCCchhhhh
Q 018547 125 RGNHEDAKI 133 (354)
Q Consensus 125 rGNHE~~~i 133 (354)
+||||....
T Consensus 76 ~GNHD~~~~ 84 (168)
T cd07390 76 KGNHDSSLE 84 (168)
T ss_pred eCCCCchhh
Confidence 999997643
No 76
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=97.11 E-value=0.0013 Score=66.51 Aligned_cols=74 Identities=18% Similarity=0.214 Sum_probs=57.5
Q ss_pred cCcEEEEeCCCCC------------HHHHHHHHHhCCCCCCCcEEeecCcccCCCCcHHHHHHHHHHHHh----------
Q 018547 59 EAPIRICGDVHGQ------------YQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIR---------- 116 (354)
Q Consensus 59 ~~~i~ViGDIHG~------------~~~L~~il~~~g~~~~~~~vfLGDyVDRG~~s~evl~ll~~Lk~~---------- 116 (354)
.+++.+++|+|-- +..|.++++.+.-...+-+|+.||++|++.-|.+++..++.+-.+
T Consensus 3 ~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~p~~~ 82 (405)
T TIGR00583 3 TIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDKPCEL 82 (405)
T ss_pred ceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHhhccCCccch
Confidence 3689999999942 567888888876666678889999999999998888665554322
Q ss_pred --------------------------CCCcEEEeCCCchhhh
Q 018547 117 --------------------------YPDKIHLLRGNHEDAK 132 (354)
Q Consensus 117 --------------------------~p~~v~lLrGNHE~~~ 132 (354)
..-.|+.+-||||...
T Consensus 83 ~~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p~ 124 (405)
T TIGR00583 83 EFLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDPS 124 (405)
T ss_pred hhccchhhhcccccccccccccccccCCCCEEEEcCCCCCcc
Confidence 1337999999999975
No 77
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=96.62 E-value=0.0041 Score=58.90 Aligned_cols=28 Identities=25% Similarity=0.255 Sum_probs=23.5
Q ss_pred HHHHHHhCCCceEEEeeeeecCCeEEec
Q 018547 235 VADFLDKNDLDLICRGHQVVEDGYEFFA 262 (354)
Q Consensus 235 ~~~fL~~~~l~~IIRgHq~v~~G~~~~~ 262 (354)
+.+.+++.++++++-||.....+.+..+
T Consensus 190 ~~~ll~~~~v~~vl~GH~H~~~~~~p~h 217 (256)
T cd07401 190 FKDLLKKYNVTAYLCGHLHPLGGLEPVH 217 (256)
T ss_pred HHHHHHhcCCcEEEeCCccCCCcceeee
Confidence 7788899999999999999987755554
No 78
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=96.45 E-value=0.0074 Score=57.51 Aligned_cols=70 Identities=16% Similarity=0.103 Sum_probs=41.1
Q ss_pred CcEEEEeCCCC----CHHHHHHHHHhCCCCCCCcEEeecCcccCC-CCc---HH-HHHHHHHHHHhCCCcEEEeCCCchh
Q 018547 60 APIRICGDVHG----QYQDLLRLFEHGGYPPTANYLFLGDYVDRG-KQS---LE-TICLLLAYKIRYPDKIHLLRGNHED 130 (354)
Q Consensus 60 ~~i~ViGDIHG----~~~~L~~il~~~g~~~~~~~vfLGDyVDRG-~~s---~e-vl~ll~~Lk~~~p~~v~lLrGNHE~ 130 (354)
-+++|+||.|. +...+.++.+. ....+-+|++||+++-+ ..+ -+ ....+-.+. ..-.++.++||||.
T Consensus 5 ~~f~v~gD~~~~~~~~~~~~~~l~~~--~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~--~~~P~~~~~GNHD~ 80 (294)
T cd00839 5 FKFAVFGDMGQNTNNSTNTLDHLEKE--LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLA--SYVPYMVTPGNHEA 80 (294)
T ss_pred EEEEEEEECCCCCCCcHHHHHHHHhc--cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHH--hcCCcEEcCccccc
Confidence 46899999995 33344444433 23445688999999544 322 12 122222222 22358999999998
Q ss_pred hhh
Q 018547 131 AKI 133 (354)
Q Consensus 131 ~~i 133 (354)
...
T Consensus 81 ~~~ 83 (294)
T cd00839 81 DYN 83 (294)
T ss_pred ccC
Confidence 643
No 79
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=96.28 E-value=0.011 Score=55.30 Aligned_cols=70 Identities=21% Similarity=0.259 Sum_probs=38.2
Q ss_pred EEEeCCC--CCH---HHHHHHHHhC-CCC----CCCcEEeecCcccCCCC------------cHHHHHHHHHH-H-HhCC
Q 018547 63 RICGDVH--GQY---QDLLRLFEHG-GYP----PTANYLFLGDYVDRGKQ------------SLETICLLLAY-K-IRYP 118 (354)
Q Consensus 63 ~ViGDIH--G~~---~~L~~il~~~-g~~----~~~~~vfLGDyVDRG~~------------s~evl~ll~~L-k-~~~p 118 (354)
++++|+| +.. ..+..+++.+ +.. ..+.+|++||++|+... ..+.+..+..+ + +...
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~ 81 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPSH 81 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcccC
Confidence 5799999 331 2223333322 221 23678899999997310 01112222222 1 1224
Q ss_pred CcEEEeCCCchhhh
Q 018547 119 DKIHLLRGNHEDAK 132 (354)
Q Consensus 119 ~~v~lLrGNHE~~~ 132 (354)
-.|+++.||||...
T Consensus 82 ~~v~~ipGNHD~~~ 95 (243)
T cd07386 82 IKIIIIPGNHDAVR 95 (243)
T ss_pred CeEEEeCCCCCccc
Confidence 57999999999853
No 80
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=96.26 E-value=0.23 Score=47.18 Aligned_cols=31 Identities=13% Similarity=0.096 Sum_probs=24.9
Q ss_pred cChHHHHHHHHhCCCceEEEeeeeecCCeEEec
Q 018547 230 FGSDVVADFLDKNDLDLICRGHQVVEDGYEFFA 262 (354)
Q Consensus 230 fG~~~~~~fL~~~~l~~IIRgHq~v~~G~~~~~ 262 (354)
-.++.+++.|++.+-.+|.-||+. ++.+..+
T Consensus 203 l~~~~s~~il~~~~P~~vfsGhdH--~~C~~~h 233 (257)
T cd08163 203 LEPSLSEVILKAVQPVIAFSGDDH--DYCEVVH 233 (257)
T ss_pred cCHHHHHHHHHhhCCcEEEecCCC--ccceeEc
Confidence 468899999999999999999987 4545433
No 81
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=96.20 E-value=0.0096 Score=53.06 Aligned_cols=47 Identities=26% Similarity=0.309 Sum_probs=30.2
Q ss_pred CCCcEEeecCcccCCCCcH--HHHHHHHHHHHhC--------CCcEEEeCCCchhhh
Q 018547 86 PTANYLFLGDYVDRGKQSL--ETICLLLAYKIRY--------PDKIHLLRGNHEDAK 132 (354)
Q Consensus 86 ~~~~~vfLGDyVDRG~~s~--evl~ll~~Lk~~~--------p~~v~lLrGNHE~~~ 132 (354)
+.+.+|++||++|.+.... +....+..++..+ +..++.+.||||...
T Consensus 45 ~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 45 KPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred CCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 4567899999999887532 2222222222211 456999999999864
No 82
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=96.10 E-value=0.012 Score=56.78 Aligned_cols=71 Identities=21% Similarity=0.215 Sum_probs=47.5
Q ss_pred CcEEEEeCCCCCHHH--HHHHHHhCCCCCCCcEEeecCcccC-CCCcHHH-HHHHHHHHHhCCCcEEEeCCCchhhh
Q 018547 60 APIRICGDVHGQYQD--LLRLFEHGGYPPTANYLFLGDYVDR-GKQSLET-ICLLLAYKIRYPDKIHLLRGNHEDAK 132 (354)
Q Consensus 60 ~~i~ViGDIHG~~~~--L~~il~~~g~~~~~~~vfLGDyVDR-G~~s~ev-l~ll~~Lk~~~p~~v~lLrGNHE~~~ 132 (354)
-+|.-++|+|-.... ..+.+........+-+++.|||+|+ .+.+.+. ...+..| +.|-.++.+-||||...
T Consensus 45 ~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~~~~~~~~~~~L~~L--~~~~gv~av~GNHd~~~ 119 (284)
T COG1408 45 LKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDRPPGVAALALFLAKL--KAPLGVFAVLGNHDYGV 119 (284)
T ss_pred eEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCCCCCHHHHHHHHHhh--hccCCEEEEeccccccc
Confidence 358999999987655 2233333333333778899999996 5555544 4444444 45668999999998764
No 83
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=95.96 E-value=0.013 Score=53.59 Aligned_cols=46 Identities=24% Similarity=0.364 Sum_probs=33.3
Q ss_pred CCCcEEeecCcccCCCCc--HHHHHHHHHHHHhCC----CcEEEeCCCchhh
Q 018547 86 PTANYLFLGDYVDRGKQS--LETICLLLAYKIRYP----DKIHLLRGNHEDA 131 (354)
Q Consensus 86 ~~~~~vfLGDyVDRG~~s--~evl~ll~~Lk~~~p----~~v~lLrGNHE~~ 131 (354)
..+.++|+||++|.|+.+ .+....+..++..++ -.++.+.||||.-
T Consensus 42 ~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 42 QPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred CCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 456788999999999964 335666656554332 3688999999974
No 84
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=95.94 E-value=0.015 Score=51.06 Aligned_cols=119 Identities=21% Similarity=0.269 Sum_probs=79.0
Q ss_pred EEEeCCCCCHHHHHHHHHhCCC--CCCCcEEeecCcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCchhhhhHhhhCCh
Q 018547 63 RICGDVHGQYQDLLRLFEHGGY--PPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFY 140 (354)
Q Consensus 63 ~ViGDIHG~~~~L~~il~~~g~--~~~~~~vfLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~i~~~~gf~ 140 (354)
.|+||+||+++.+.+-++...- .+-+-++++||+..-...+-+ +.-.+.=..+.|--.+++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~-~~~y~~g~~~~pipTyf~ggn~~----------- 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEE-LEAYKDGSKKVPIPTYFLGGNNP----------- 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccchhh-HHHHhcCCccCCCCEEEECCCCC-----------
Confidence 4899999999999877765321 234668899999976655533 33333334567888999999998
Q ss_pred HHHHHHHhHHhHHHHhhhhhcCCceEEEcceEEEecCCCCCCCCCHHHhhccCCCCCCCCCCcccccccCCCCCCCCCcc
Q 018547 141 DECKRRFNVRLWKIFTDCFNCLPVAALINEKILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDANIEGWA 220 (354)
Q Consensus 141 ~e~~~~~~~~~~~~~~~~f~~LPlaaii~~~il~vHgGisp~~~~l~~i~~i~Rp~~~~~~~~~~dlLWsDP~~~~~~~~ 220 (354)
+-.||.+|.=+.. +...++ .+.+
T Consensus 69 ----------------------------~~DILlTh~wP~g-i~~~~~-------------------~~~~--------- 91 (150)
T cd07380 69 ----------------------------GVDILLTSEWPKG-ISKLSK-------------------VPFE--------- 91 (150)
T ss_pred ----------------------------CCCEEECCCCchh-hhhhCC-------------------Cccc---------
Confidence 4479999983221 100000 0000
Q ss_pred cCCCCcceecChHHHHHHHHhCCCceEEEeeeee
Q 018547 221 DSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVV 254 (354)
Q Consensus 221 ~~~rg~g~~fG~~~~~~fL~~~~l~~IIRgHq~v 254 (354)
..+..-|...+.+++++..=.+.+-||..+
T Consensus 92 ----~~~~~~GS~~i~~l~~~lkPrYhf~gh~~~ 121 (150)
T cd07380 92 ----ETLLICGSDLIAELAKKLKPRYHFAGLEGV 121 (150)
T ss_pred ----ccccCCCCHHHHHHHHHcCCCeEeecCCCc
Confidence 012245788999999999989999999754
No 85
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=95.90 E-value=0.015 Score=51.20 Aligned_cols=71 Identities=17% Similarity=0.172 Sum_probs=42.4
Q ss_pred cEEEEeCCCCC------------HHHHHHHH-HhC--CCCCCCcEEeecCcccCCCCcHHHHHHHHHHHHhCCCcEEEeC
Q 018547 61 PIRICGDVHGQ------------YQDLLRLF-EHG--GYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLR 125 (354)
Q Consensus 61 ~i~ViGDIHG~------------~~~L~~il-~~~--g~~~~~~~vfLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLr 125 (354)
.++.+||.|=. .+....++ ... -..|++.+.+|||+.-.-...-+..+.+-+ -|+++++++
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~~~a~~Iler----LnGrkhlv~ 80 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRERAAGLILER----LNGRKHLVP 80 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchhhHHHHHHHH----cCCcEEEee
Confidence 37888898842 33333322 110 124567788999998644443333333333 378899999
Q ss_pred CCchhhhhHh
Q 018547 126 GNHEDAKINR 135 (354)
Q Consensus 126 GNHE~~~i~~ 135 (354)
||||.-.-..
T Consensus 81 GNhDk~~~~~ 90 (186)
T COG4186 81 GNHDKCHPMY 90 (186)
T ss_pred CCCCCCcccc
Confidence 9999865433
No 86
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=95.71 E-value=0.021 Score=53.29 Aligned_cols=66 Identities=27% Similarity=0.282 Sum_probs=42.5
Q ss_pred cEEEEeCCCCCH---------HHHHHHHHhCCCC-CCCcEEeecCcccCCCCcH-----HHHHHHHHHHHhCCCcEEEeC
Q 018547 61 PIRICGDVHGQY---------QDLLRLFEHGGYP-PTANYLFLGDYVDRGKQSL-----ETICLLLAYKIRYPDKIHLLR 125 (354)
Q Consensus 61 ~i~ViGDIHG~~---------~~L~~il~~~g~~-~~~~~vfLGDyVDRG~~s~-----evl~ll~~Lk~~~p~~v~lLr 125 (354)
+++.++|+||.+ ..+.++++...-. +++-+|..||+++..+.+- .++..+-++ +-.+ +..
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~----g~d~-~~~ 76 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNAL----GYDA-VTI 76 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhc----CCCE-Eee
Confidence 578899999886 5566666664433 3445678999999887643 344443332 2233 445
Q ss_pred CCchhh
Q 018547 126 GNHEDA 131 (354)
Q Consensus 126 GNHE~~ 131 (354)
||||..
T Consensus 77 GNHe~d 82 (252)
T cd00845 77 GNHEFD 82 (252)
T ss_pred cccccc
Confidence 999963
No 87
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=95.54 E-value=0.036 Score=55.45 Aligned_cols=75 Identities=21% Similarity=0.181 Sum_probs=53.5
Q ss_pred CcEEEEeCCCCC-------------HHHHHHHHHhCCCCCCCcEEeecCcccCCCCcHHHHHHHHHHHHhC---CCcEEE
Q 018547 60 APIRICGDVHGQ-------------YQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRY---PDKIHL 123 (354)
Q Consensus 60 ~~i~ViGDIHG~-------------~~~L~~il~~~g~~~~~~~vfLGDyVDRG~~s~evl~ll~~Lk~~~---p~~v~l 123 (354)
+++..++|.|=- +.+|..+++.+.-...+-+|.-||+.|++.-|.+++..+...-.+. .-.|++
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~ 80 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVV 80 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEE
Confidence 578888999844 3445555555544455778899999999998888877765542222 237999
Q ss_pred eCCCchhhhhH
Q 018547 124 LRGNHEDAKIN 134 (354)
Q Consensus 124 LrGNHE~~~i~ 134 (354)
|.||||...-.
T Consensus 81 I~GNHD~~~~~ 91 (390)
T COG0420 81 IAGNHDSPSRL 91 (390)
T ss_pred ecCCCCchhcc
Confidence 99999997643
No 88
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=95.29 E-value=0.36 Score=49.62 Aligned_cols=195 Identities=19% Similarity=0.283 Sum_probs=104.7
Q ss_pred cEEEEeCCCC-CHH----HHHHHHHhCCCC----CCCcEE-eecCcccC-C-----------CCcHHHHHHHHHHHHhCC
Q 018547 61 PIRICGDVHG-QYQ----DLLRLFEHGGYP----PTANYL-FLGDYVDR-G-----------KQSLETICLLLAYKIRYP 118 (354)
Q Consensus 61 ~i~ViGDIHG-~~~----~L~~il~~~g~~----~~~~~v-fLGDyVDR-G-----------~~s~evl~ll~~Lk~~~p 118 (354)
.+..++|+|= ... .+..+++.++-+ +..+|+ .-||.||. | .+..|-...+..+--.-|
T Consensus 227 ~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~~vp 306 (481)
T COG1311 227 YVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLDQVP 306 (481)
T ss_pred EEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHhhCC
Confidence 4889999995 222 233333333322 233555 68899994 2 122333444444433445
Q ss_pred C--cEEEeCCCchhhhhHhhh-CChHHHHHHHhHHhHHHHhhhhhcCCceEEEcc-eEEEecCCCCCCCCCHHHhhccCC
Q 018547 119 D--KIHLLRGNHEDAKINRIY-GFYDECKRRFNVRLWKIFTDCFNCLPVAALINE-KILCMHGGLSPELENLDQIRNISR 194 (354)
Q Consensus 119 ~--~v~lLrGNHE~~~i~~~~-gf~~e~~~~~~~~~~~~~~~~f~~LPlaaii~~-~il~vHgGisp~~~~l~~i~~i~R 194 (354)
+ .|++.+||||..-....- .+.+..+ .++...+-.|-.=|...-+++ .++..|| .++++|...-.
T Consensus 307 ~~I~v~i~PGnhDa~r~a~PQp~~~~~~k-----slf~~~n~~~v~NP~~~~l~G~~vL~~hG------~sidDii~~vP 375 (481)
T COG1311 307 EHIKVFIMPGNHDAVRQALPQPHFPELIK-----SLFSLNNLLFVSNPALVSLHGVDVLIYHG------RSIDDIIKLVP 375 (481)
T ss_pred CCceEEEecCCCCccccccCCCCcchhhc-----ccccccceEecCCCcEEEECCEEEEEecC------CCHHHHHhhCC
Confidence 5 579999999986543211 2222222 333333333444465555555 6888888 35666544333
Q ss_pred CCCCCC--------------CCcccccccCCCCCCCCCcccCCCCcceecChHHHHHHHHhCCCceEEEeeeeecCCeEE
Q 018547 195 PTDIPD--------------NGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVVEDGYEF 260 (354)
Q Consensus 195 p~~~~~--------------~~~~~dlLWsDP~~~~~~~~~~~rg~g~~fG~~~~~~fL~~~~l~~IIRgHq~v~~G~~~ 260 (354)
..+..+ ....-+-+|.-|... ..+. ++ --=++++.||++. .|+..
T Consensus 376 ~~~~~~~~~ame~lLk~rHlaPtygg~~p~aP~~k-D~lV--------------Ie-----evPDv~~~Ghvh~-~g~~~ 434 (481)
T COG1311 376 GADYDSPLKAMEELLKRRHLAPTYGGTLPIAPETK-DYLV--------------IE-----EVPDVFHTGHVHK-FGTGV 434 (481)
T ss_pred CCCccchHHHHHHHHHhcccCCCCCCccccccCCc-Ccee--------------ec-----cCCcEEEEccccc-cceeE
Confidence 222111 112234455555431 1110 00 1134678999998 68888
Q ss_pred ecCCeEEEEeeCCCCCCCCCCceeEEEecCC
Q 018547 261 FARRRLVTIFSAPNYGGEFDNAGALLSVNES 291 (354)
Q Consensus 261 ~~~~~~iTvfSa~~Y~~~~~N~ga~l~i~~~ 291 (354)
..+.+++..+|-+.+. -.+-++.|+..
T Consensus 435 y~gv~~vns~T~q~qT----efqk~vni~p~ 461 (481)
T COG1311 435 YEGVNLVNSGTWQEQT----EFQKMVNINPT 461 (481)
T ss_pred EeccceEEeeeecchh----ccceEEEecCc
Confidence 8888899888888664 34455555543
No 89
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=94.94 E-value=0.05 Score=49.70 Aligned_cols=65 Identities=18% Similarity=0.171 Sum_probs=41.2
Q ss_pred CCCCCHHHHHHHHHhCCCC-CCCcEEeecCcccCCCCcHHH-HHHHHHHHHhC---------------------CCcEEE
Q 018547 67 DVHGQYQDLLRLFEHGGYP-PTANYLFLGDYVDRGKQSLET-ICLLLAYKIRY---------------------PDKIHL 123 (354)
Q Consensus 67 DIHG~~~~L~~il~~~g~~-~~~~~vfLGDyVDRG~~s~ev-l~ll~~Lk~~~---------------------p~~v~l 123 (354)
|++|+=.-|.+.++.+... ..+.++||||++|.|--+-+- -.....++..+ ...++.
T Consensus 24 d~~~~D~YL~~~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~ 103 (193)
T cd08164 24 DLFGNDYFLGHIVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLIN 103 (193)
T ss_pred hhhhhHHHHHHHHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEE
Confidence 5567766677777664432 346688999999987543322 23344443322 135789
Q ss_pred eCCCchhh
Q 018547 124 LRGNHEDA 131 (354)
Q Consensus 124 LrGNHE~~ 131 (354)
|.||||.-
T Consensus 104 V~GNHDIG 111 (193)
T cd08164 104 IAGNHDVG 111 (193)
T ss_pred ECCcccCC
Confidence 99999983
No 90
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=94.25 E-value=0.046 Score=51.15 Aligned_cols=73 Identities=18% Similarity=0.208 Sum_probs=44.9
Q ss_pred CcEEEEeCCCCCHHHHHHHHHhCCCCCCCcEEeecCcccCCCCcH-------------------------HHHHHHHHHH
Q 018547 60 APIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSL-------------------------ETICLLLAYK 114 (354)
Q Consensus 60 ~~i~ViGDIHG~~~~L~~il~~~g~~~~~~~vfLGDyVDRG~~s~-------------------------evl~ll~~Lk 114 (354)
.+|..++|.||+++.+.++.+.+.-...+-+||+||++-....+- |.++-++..-
T Consensus 6 ~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~L 85 (255)
T PF14582_consen 6 RKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRIL 85 (255)
T ss_dssp -EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHHH
T ss_pred hhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHHH
Confidence 469999999999999999988766556788999999986443333 2333333333
Q ss_pred HhCCCcEEEeCCCchhhh
Q 018547 115 IRYPDKIHLLRGNHEDAK 132 (354)
Q Consensus 115 ~~~p~~v~lLrGNHE~~~ 132 (354)
-..+-.+++++||||...
T Consensus 86 ~~~~~p~~~vPG~~Dap~ 103 (255)
T PF14582_consen 86 GELGVPVFVVPGNMDAPE 103 (255)
T ss_dssp HCC-SEEEEE--TTS-SH
T ss_pred HhcCCcEEEecCCCCchH
Confidence 445668999999999964
No 91
>PLN02533 probable purple acid phosphatase
Probab=93.92 E-value=0.075 Score=54.22 Aligned_cols=71 Identities=18% Similarity=0.129 Sum_probs=39.5
Q ss_pred cCcEEEEeCCCCCHHHHHHHHHhCCCCCCCcEEeecCcccCCCCcH--HH-HHHHHHHHHhCCCcEEEeCCCchhhh
Q 018547 59 EAPIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSL--ET-ICLLLAYKIRYPDKIHLLRGNHEDAK 132 (354)
Q Consensus 59 ~~~i~ViGDIHG~~~~L~~il~~~g~~~~~~~vfLGDyVDRG~~s~--ev-l~ll~~Lk~~~p~~v~lLrGNHE~~~ 132 (354)
.-+++++||+|-. ......++.+.....+-+|+.||+++-+...- +. ..++..+... --++.+.||||...
T Consensus 139 ~~~f~v~GDlG~~-~~~~~tl~~i~~~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~--~P~m~~~GNHE~~~ 212 (427)
T PLN02533 139 PIKFAVSGDLGTS-EWTKSTLEHVSKWDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQ--RPWMVTHGNHELEK 212 (427)
T ss_pred CeEEEEEEeCCCC-cccHHHHHHHHhcCCCEEEEcCccccccchHHHHHHHHHHhhhHhhc--CceEEeCccccccc
Confidence 3468999999632 11122333333334566889999997553321 11 1222222222 24789999999863
No 92
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=93.75 E-value=0.19 Score=47.28 Aligned_cols=73 Identities=18% Similarity=0.217 Sum_probs=45.0
Q ss_pred cCcEEEEeCCCCCHHHHH----------------HHHH-hCCCCCCCcEEeecCcccCCCC-----cHHHHHHHHHHHHh
Q 018547 59 EAPIRICGDVHGQYQDLL----------------RLFE-HGGYPPTANYLFLGDYVDRGKQ-----SLETICLLLAYKIR 116 (354)
Q Consensus 59 ~~~i~ViGDIHG~~~~L~----------------~il~-~~g~~~~~~~vfLGDyVDRG~~-----s~evl~ll~~Lk~~ 116 (354)
..+..|+.|+|=-+.... +.++ .......+++|.+||.-.-.+. ..++-.++-.++.
T Consensus 19 ~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~- 97 (235)
T COG1407 19 LGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDE- 97 (235)
T ss_pred cCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhcc-
Confidence 578999999996554332 2222 1122235689999999865433 2444444433332
Q ss_pred CCCcEEEeCCCchhhhhH
Q 018547 117 YPDKIHLLRGNHEDAKIN 134 (354)
Q Consensus 117 ~p~~v~lLrGNHE~~~i~ 134 (354)
. .+++++||||...-.
T Consensus 98 ~--evi~i~GNHD~~i~~ 113 (235)
T COG1407 98 R--EVIIIRGNHDNGIEE 113 (235)
T ss_pred C--cEEEEeccCCCcccc
Confidence 2 599999999986533
No 93
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=93.45 E-value=0.094 Score=49.91 Aligned_cols=66 Identities=21% Similarity=0.170 Sum_probs=37.3
Q ss_pred cEEEEeCCCCCH----------------HHHHHHHHhCCCCCCCcEE-eecCcccCCCCc-----------HHHHHHHHH
Q 018547 61 PIRICGDVHGQY----------------QDLLRLFEHGGYPPTANYL-FLGDYVDRGKQS-----------LETICLLLA 112 (354)
Q Consensus 61 ~i~ViGDIHG~~----------------~~L~~il~~~g~~~~~~~v-fLGDyVDRG~~s-----------~evl~ll~~ 112 (354)
.|+.++|+||++ ..+..+++...-...+.++ ..||+++..+.+ ..++..+-.
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln~ 81 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMNA 81 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHHh
Confidence 477899999986 3355555554322223333 379999866522 123344333
Q ss_pred HHHhCCCcEEEeCCCchhh
Q 018547 113 YKIRYPDKIHLLRGNHEDA 131 (354)
Q Consensus 113 Lk~~~p~~v~lLrGNHE~~ 131 (354)
+ -. . ++..||||..
T Consensus 82 ~---g~-d-~~~lGNHe~d 95 (277)
T cd07410 82 L---GY-D-AGTLGNHEFN 95 (277)
T ss_pred c---CC-C-EEeecccCcc
Confidence 3 22 2 4455999963
No 94
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=93.27 E-value=0.17 Score=47.72 Aligned_cols=70 Identities=21% Similarity=0.167 Sum_probs=39.6
Q ss_pred cEEEEeCCCCC--H--HHHHHHHH-hCCCCCCCcEEeecCcc-cCCCCcH------HHHHHHHHHHHhCCCcEEEeCCCc
Q 018547 61 PIRICGDVHGQ--Y--QDLLRLFE-HGGYPPTANYLFLGDYV-DRGKQSL------ETICLLLAYKIRYPDKIHLLRGNH 128 (354)
Q Consensus 61 ~i~ViGDIHG~--~--~~L~~il~-~~g~~~~~~~vfLGDyV-DRG~~s~------evl~ll~~Lk~~~p~~v~lLrGNH 128 (354)
+..++||.-.. . .++.+.+. .+...+.+-+|++||++ +-|..+. +.+..++.. ....-.++.+.|||
T Consensus 2 ~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~-~~~~~P~~~v~GNH 80 (277)
T cd07378 2 RFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSA-PSLQVPWYLVLGNH 80 (277)
T ss_pred eEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccc-hhhcCCeEEecCCc
Confidence 47899998763 1 23333333 22223446688999997 5554221 222222221 11234689999999
Q ss_pred hhh
Q 018547 129 EDA 131 (354)
Q Consensus 129 E~~ 131 (354)
|..
T Consensus 81 D~~ 83 (277)
T cd07378 81 DYS 83 (277)
T ss_pred ccC
Confidence 986
No 95
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=93.14 E-value=4.5 Score=38.66 Aligned_cols=45 Identities=22% Similarity=0.431 Sum_probs=27.4
Q ss_pred eEEEeeeeecCCeEEec--CCeEEEEeeCCCCCCCCCCceeEEEec-CCceeE
Q 018547 246 LICRGHQVVEDGYEFFA--RRRLVTIFSAPNYGGEFDNAGALLSVN-ESLVCS 295 (354)
Q Consensus 246 ~IIRgHq~v~~G~~~~~--~~~~iTvfSa~~Y~~~~~N~ga~l~i~-~~~~~~ 295 (354)
.++-|||+. -|.+... +++-+.+.|.|.|. ..|.++.+| +++.+.
T Consensus 206 Vyf~Gnq~~-f~t~~~~~~~~~~v~lv~vP~Fs----~t~~~vlvdl~tLe~~ 253 (257)
T cd07387 206 VYFAGNQPK-FGTKLVEGEEGQRVLLVCVPSFS----KTGTAVLVNLRTLECE 253 (257)
T ss_pred EEEeCCCcc-eeeeEEEcCCCCeEEEEEeCCcC----cCCEEEEEECCcCcEE
Confidence 457899986 3444432 36678888889885 355555554 244444
No 96
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=91.66 E-value=0.24 Score=46.71 Aligned_cols=66 Identities=21% Similarity=0.128 Sum_probs=39.7
Q ss_pred cEEEEeCCCCCH----------HHHHHHHHhCCCCCCCcEEeecCcccCCCCcH-----HHHHHHHHHHHhCCCcEEEeC
Q 018547 61 PIRICGDVHGQY----------QDLLRLFEHGGYPPTANYLFLGDYVDRGKQSL-----ETICLLLAYKIRYPDKIHLLR 125 (354)
Q Consensus 61 ~i~ViGDIHG~~----------~~L~~il~~~g~~~~~~~vfLGDyVDRG~~s~-----evl~ll~~Lk~~~p~~v~lLr 125 (354)
++.-++|+||++ ..+..+++...-.+.+-++..||+++..+.+. .++..+-.+ +-.+ ...
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~----g~d~-~~~ 76 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPISDLDKGETIIKIMNAV----GYDA-VTP 76 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhc----CCcE-Ecc
Confidence 477889999974 44556666543334556677999998765432 222232222 2244 456
Q ss_pred CCchhh
Q 018547 126 GNHEDA 131 (354)
Q Consensus 126 GNHE~~ 131 (354)
||||..
T Consensus 77 GNHefd 82 (257)
T cd07408 77 GNHEFD 82 (257)
T ss_pred cccccc
Confidence 999963
No 97
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=90.82 E-value=0.53 Score=46.83 Aligned_cols=73 Identities=25% Similarity=0.442 Sum_probs=47.6
Q ss_pred CcEEEEeCCCCCHHHHHH---HHHhCCCCCCCcEEeecCccc-CCC---CcHHH---HHHHHHH------HHhCCCcEEE
Q 018547 60 APIRICGDVHGQYQDLLR---LFEHGGYPPTANYLFLGDYVD-RGK---QSLET---ICLLLAY------KIRYPDKIHL 123 (354)
Q Consensus 60 ~~i~ViGDIHG~~~~L~~---il~~~g~~~~~~~vfLGDyVD-RG~---~s~ev---l~ll~~L------k~~~p~~v~l 123 (354)
|+|.|-|=-||+++.+-+ ..++.|-.+.+-++++||+=. |.. +++.| ...+-.. ....|---++
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 589999999999999874 445555567788899999852 211 11111 1111111 2345666788
Q ss_pred eCCCchhhh
Q 018547 124 LRGNHEDAK 132 (354)
Q Consensus 124 LrGNHE~~~ 132 (354)
+-||||.+.
T Consensus 81 IGGNHEAsn 89 (456)
T KOG2863|consen 81 IGGNHEASN 89 (456)
T ss_pred ecCchHHHH
Confidence 999999975
No 98
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=90.75 E-value=0.45 Score=48.19 Aligned_cols=56 Identities=27% Similarity=0.372 Sum_probs=37.3
Q ss_pred HHHHHHhCCCCC-CCcEEeecCcccCCCCc--HHHHHHHHHHHHhCCC----cEEEeCCCchh
Q 018547 75 LLRLFEHGGYPP-TANYLFLGDYVDRGKQS--LETICLLLAYKIRYPD----KIHLLRGNHED 130 (354)
Q Consensus 75 L~~il~~~g~~~-~~~~vfLGDyVDRG~~s--~evl~ll~~Lk~~~p~----~v~lLrGNHE~ 130 (354)
|.+.+....+.- .+-++||||++|-|... -|--....++|..++. ++..+.||||-
T Consensus 81 lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDI 143 (410)
T KOG3662|consen 81 LRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGRKGNIKVIYIAGNHDI 143 (410)
T ss_pred HHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHhhCCCCCCeeEEeCCcccc
Confidence 344555444432 35567899999988755 3444555566666655 68999999997
No 99
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=90.25 E-value=9.8 Score=33.62 Aligned_cols=116 Identities=26% Similarity=0.412 Sum_probs=78.7
Q ss_pred EEEEeCCCC--CHHHHHHHHHhCCCCCC-CcEEeecCcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCchhhhhHhhhC
Q 018547 62 IRICGDVHG--QYQDLLRLFEHGGYPPT-ANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYG 138 (354)
Q Consensus 62 i~ViGDIHG--~~~~L~~il~~~g~~~~-~~~vfLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~i~~~~g 138 (354)
+.++||+|= ...+|-.=|++.-.|.. ..++++|++ -|.|++++|-.+ .++++++||--|..
T Consensus 3 vL~lgD~HiP~Ra~~Lp~KFkklLvPgki~hilctGNl-----cs~e~~dylk~l----~~dvhiVrGeFD~~------- 66 (183)
T KOG3325|consen 3 VLVLGDLHIPHRANDLPAKFKKLLVPGKIQHILCTGNL-----CSKESYDYLKTL----SSDVHIVRGEFDEN------- 66 (183)
T ss_pred EEEeccccCCccccccCHHHHhccCCCceeEEEEeCCc-----chHHHHHHHHhh----CCCcEEEecccCcc-------
Confidence 678999995 44555555666555654 568899996 467888888665 35899999977653
Q ss_pred ChHHHHHHHhHHhHHHHhhhhhcCCceEEEc---ceEEEecCCCCCCCCCHHHhhccCCCCCCCCCCcccccccCCCCCC
Q 018547 139 FYDECKRRFNVRLWKIFTDCFNCLPVAALIN---EKILCMHGGLSPELENLDQIRNISRPTDIPDNGLLCDLLWSDPDAN 215 (354)
Q Consensus 139 f~~e~~~~~~~~~~~~~~~~f~~LPlaaii~---~~il~vHgGisp~~~~l~~i~~i~Rp~~~~~~~~~~dlLWsDP~~~ 215 (354)
..-|..-++. =++-|+||-.- +=|.||.
T Consensus 67 ---------------------~~yP~~kvvtvGqfkIG~chGhqV--------------------------iP~gd~~-- 97 (183)
T KOG3325|consen 67 ---------------------LKYPENKVVTVGQFKIGLCHGHQV--------------------------IPWGDPE-- 97 (183)
T ss_pred ---------------------ccCCccceEEeccEEEEeecCcEe--------------------------ecCCCHH--
Confidence 1223333332 27899999421 2355553
Q ss_pred CCCcccCCCCcceecChHHHHHHHHhCCCceEEEeeeeecCCeEE
Q 018547 216 IEGWADSDRGVSCTFGSDVVADFLDKNDLDLICRGHQVVEDGYEF 260 (354)
Q Consensus 216 ~~~~~~~~rg~g~~fG~~~~~~fL~~~~l~~IIRgHq~v~~G~~~ 260 (354)
.+.-.-++.+++.++-||+..-+.|+.
T Consensus 98 ------------------sL~~LaRqldvDILl~G~Th~f~Aye~ 124 (183)
T KOG3325|consen 98 ------------------SLALLARQLDVDILLTGHTHKFEAYEH 124 (183)
T ss_pred ------------------HHHHHHHhcCCcEEEeCCceeEEEEEe
Confidence 455566778999999999997777663
No 100
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=89.30 E-value=0.69 Score=44.24 Aligned_cols=62 Identities=24% Similarity=0.267 Sum_probs=37.7
Q ss_pred HHHHHHHHhCCC--CCCCcEEeecCcccCCCCcH--H------HHHHHHHHHHhCCC-cEEEeCCCchhhhhH
Q 018547 73 QDLLRLFEHGGY--PPTANYLFLGDYVDRGKQSL--E------TICLLLAYKIRYPD-KIHLLRGNHEDAKIN 134 (354)
Q Consensus 73 ~~L~~il~~~g~--~~~~~~vfLGDyVDRG~~s~--e------vl~ll~~Lk~~~p~-~v~lLrGNHE~~~i~ 134 (354)
..+..+++.+.. ++.+-+|+.||+++.+.... + .-.+...++..+|. .|+.+.||||....+
T Consensus 53 ~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~~p~~ 125 (296)
T cd00842 53 RLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDSYPVN 125 (296)
T ss_pred HHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCCCccc
Confidence 445555554332 35567889999998876431 1 12222334444444 799999999987543
No 101
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=89.26 E-value=0.66 Score=42.11 Aligned_cols=74 Identities=19% Similarity=0.237 Sum_probs=45.8
Q ss_pred CCCCcEEeecCcc--cCCCCcHHHHHHHHHHHHhCCCcEEEeCCCchhhhhHhhhCChHHHHHHHhHHhHHHHhhhhhcC
Q 018547 85 PPTANYLFLGDYV--DRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCL 162 (354)
Q Consensus 85 ~~~~~~vfLGDyV--DRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~i~~~~gf~~e~~~~~~~~~~~~~~~~f~~L 162 (354)
.+++.++.-||+- -|=++..+-+.++-+| |..=+++|||||.+.-.. ..+...+... ....++.|..+
T Consensus 42 ~~eDiVllpGDiSWaM~l~ea~~Dl~~i~~L----PG~K~m~rGNHDYWw~s~-----skl~n~lp~~-l~~~n~~f~l~ 111 (230)
T COG1768 42 SPEDIVLLPGDISWAMRLEEAEEDLRFIGDL----PGTKYMIRGNHDYWWSSI-----SKLNNALPPI-LFYLNNGFELL 111 (230)
T ss_pred ChhhEEEecccchhheechhhhhhhhhhhcC----CCcEEEEecCCccccchH-----HHHHhhcCch-HhhhccceeEe
Confidence 3456677789975 4556666767777665 888899999999986421 2233333322 33455666666
Q ss_pred CceEEEc
Q 018547 163 PVAALIN 169 (354)
Q Consensus 163 Plaaii~ 169 (354)
-+| +++
T Consensus 112 n~a-I~G 117 (230)
T COG1768 112 NYA-IVG 117 (230)
T ss_pred eEE-EEE
Confidence 543 444
No 102
>PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases.; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D ....
Probab=89.04 E-value=1.2 Score=36.00 Aligned_cols=46 Identities=20% Similarity=0.346 Sum_probs=32.6
Q ss_pred CCCChHHHHHHHHHHHccCCCccccCCHHHHHHHHHHHHHHHhhCCCeeee
Q 018547 8 GMMDKVVLDDIIRRLLEGRGGKQVQLSESEIRQLCVNARQIFLSQPNLVEV 58 (354)
Q Consensus 8 ~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~i~~l~~~a~~il~~ep~vl~l 58 (354)
+.++.+.+.+++++.- .++ .|+...+..|+.++.++|+++|+++++
T Consensus 50 ~~it~efv~~mie~FK---~~K--~Lhkkyv~~Il~~~~~llk~~PslVeI 95 (95)
T PF08321_consen 50 EPITLEFVKAMIEWFK---NQK--KLHKKYVYQILLEAKKLLKQLPSLVEI 95 (95)
T ss_dssp TB--HHHHHHHHHHHH---CT------HHHHHHHHHHHHHHHHTS-SEEEE
T ss_pred CCCCHHHHHHHHHHHH---hCC--CccHHHHHHHHHHHHHHHHhCcCccCC
Confidence 3566777778887774 333 577999999999999999999999985
No 103
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=88.98 E-value=0.66 Score=44.63 Aligned_cols=66 Identities=26% Similarity=0.263 Sum_probs=40.3
Q ss_pred cEEEEeCCCCCHH--------------HHHHHHHhCCC-CCCCcEEeecCcccCCCC-c-----HHHHHHHHHHHHhCCC
Q 018547 61 PIRICGDVHGQYQ--------------DLLRLFEHGGY-PPTANYLFLGDYVDRGKQ-S-----LETICLLLAYKIRYPD 119 (354)
Q Consensus 61 ~i~ViGDIHG~~~--------------~L~~il~~~g~-~~~~~~vfLGDyVDRG~~-s-----~evl~ll~~Lk~~~p~ 119 (354)
+++.+.|+||++. .+..+++.... .++.-+|..||+++..+. + ..++..+-++. -
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g----~ 77 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMG----V 77 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhC----C
Confidence 4778999999854 35555655432 234456679999987654 2 13444444442 2
Q ss_pred cEEEeCCCchhh
Q 018547 120 KIHLLRGNHEDA 131 (354)
Q Consensus 120 ~v~lLrGNHE~~ 131 (354)
.+ +..||||.-
T Consensus 78 Da-~t~GNHefd 88 (288)
T cd07412 78 DA-SAVGNHEFD 88 (288)
T ss_pred ee-eeecccccc
Confidence 33 555999964
No 104
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=88.02 E-value=0.79 Score=43.39 Aligned_cols=64 Identities=22% Similarity=0.187 Sum_probs=35.6
Q ss_pred EEEEeCCCCCHH----------------------HHHHHHHhCCCC--CCCcEEeecCcccCCCCcH-----HHHHHHHH
Q 018547 62 IRICGDVHGQYQ----------------------DLLRLFEHGGYP--PTANYLFLGDYVDRGKQSL-----ETICLLLA 112 (354)
Q Consensus 62 i~ViGDIHG~~~----------------------~L~~il~~~g~~--~~~~~vfLGDyVDRG~~s~-----evl~ll~~ 112 (354)
+..++|+||++. .+..+++..... ++.-+|..||+++..+.+. .++..+-.
T Consensus 3 il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l~~ 82 (264)
T cd07411 3 LLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDALNA 82 (264)
T ss_pred EEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHHHh
Confidence 567888998743 344455543222 2333456999998776432 33333333
Q ss_pred HHHhCCCcEEEeCCCchhh
Q 018547 113 YKIRYPDKIHLLRGNHEDA 131 (354)
Q Consensus 113 Lk~~~p~~v~lLrGNHE~~ 131 (354)
+ +-.+.. ||||..
T Consensus 83 ~----g~da~~--GNHefd 95 (264)
T cd07411 83 L----GVDAMV--GHWEFT 95 (264)
T ss_pred h----CCeEEe--cccccc
Confidence 2 333333 999964
No 105
>KOG0918 consensus Selenium-binding protein [Inorganic ion transport and metabolism]
Probab=87.82 E-value=0.023 Score=56.78 Aligned_cols=193 Identities=11% Similarity=-0.086 Sum_probs=118.5
Q ss_pred CCcEEeecCcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCchhhhhHhhhCChHHHHHHH----hHHhHHHHhhhhhcC
Q 018547 87 TANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRF----NVRLWKIFTDCFNCL 162 (354)
Q Consensus 87 ~~~~vfLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~i~~~~gf~~e~~~~~----~~~~~~~~~~~f~~L 162 (354)
.-..|+++++.+++.+.++.+-+-+..+..+-.+....++||+... ++++++.-.. ...+++..++-++.+
T Consensus 48 ~latVdvdp~s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~~~~~-----~~R~~LVlp~l~S~riyvid~~~ep~~~~ 122 (476)
T KOG0918|consen 48 YLATVDVDPSSPTYCQVIHRLPMPYLGDELHHSGWNSCSSCHGDSS-----FKRRYLVLPSLNSGRIYVIDVKTEPRKPS 122 (476)
T ss_pred ceeEEecCCCCCcceeeEEEeccCcccchhcccchhhhhhhccCcc-----hhhhheeecccccCceEEEEeccCcCccc
Confidence 4468899999999999999999988888888888899999995432 3332222111 124667788888888
Q ss_pred CceEEEcceEEEecCCCCCCCCCHHHhhccCCCC--C--CCCCCcccccccCCCCCCCCCcccCCCCcceecChHH--HH
Q 018547 163 PVAALINEKILCMHGGLSPELENLDQIRNISRPT--D--IPDNGLLCDLLWSDPDANIEGWADSDRGVSCTFGSDV--VA 236 (354)
Q Consensus 163 Plaaii~~~il~vHgGisp~~~~l~~i~~i~Rp~--~--~~~~~~~~dlLWsDP~~~~~~~~~~~rg~g~~fG~~~--~~ 236 (354)
+...+.. ++++.||+..|.......+..+.-.. + -...+ -..++=+|-.. ...|.. ++....||.+. .-
T Consensus 123 l~k~i~~-~il~~~~l~~Pht~hcla~g~v~vs~lGd~~gn~kg-~f~llD~~~~~-k~tw~~--~~~~p~~gyDfwyqp 197 (476)
T KOG0918|consen 123 LEKTIDP-DILEKTGLACPHTSHCLASGNVMVSCLGDAEGNAKG-GFLLLDSDFNE-KGTWEK--PGHSPLFGYDFWYQP 197 (476)
T ss_pred eeeeech-hhHhhcCCcCCcccccccCCCeeEEeecccccCCcC-CeEEecCccce-eccccc--CCCccccccceeecc
Confidence 9987755 99999999999775544333221100 0 00011 11122112111 123322 22223333332 22
Q ss_pred HHHHhCCCceEEEeeeeecCCeEEecCCeEEEEeeCCCCCCCCCCceeEEEecCC
Q 018547 237 DFLDKNDLDLICRGHQVVEDGYEFFARRRLVTIFSAPNYGGEFDNAGALLSVNES 291 (354)
Q Consensus 237 ~fL~~~~l~~IIRgHq~v~~G~~~~~~~~~iTvfSa~~Y~~~~~N~ga~l~i~~~ 291 (354)
++....+.+...+.|+-...+...+.++ .+.++.+-|.-...+.++.+.++.+
T Consensus 198 r~~~mIstewgap~~~~~gf~~~~v~d~--lyg~~lhvy~w~~~~~~QtidL~~~ 250 (476)
T KOG0918|consen 198 RHNVMISTEWGAPNALRKGFNPADVEDG--LYGSHLHVYQWSPGELKQTIDLGDT 250 (476)
T ss_pred ccceEEeecccCchhhhcCCChhHhhcc--ceeeeeEEEecCCccceeEEecCCC
Confidence 3445556666677777643344444554 7888888888888888999888875
No 106
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=85.18 E-value=8.7 Score=35.06 Aligned_cols=85 Identities=14% Similarity=0.246 Sum_probs=66.8
Q ss_pred CcEEeecCcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCchhhhhHhhhCCh----------------HHHHHHHhHHh
Q 018547 88 ANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFY----------------DECKRRFNVRL 151 (354)
Q Consensus 88 ~~~vfLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~i~~~~gf~----------------~e~~~~~~~~~ 151 (354)
..+||+|- |-+.-|.+.++-+++.+|.++.++ .|+-|.|..++...|. .|..+.|-..+
T Consensus 40 ~~lVvlGS----GGHT~EMlrLl~~l~~~y~~r~yI-~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~ltSv 114 (211)
T KOG3339|consen 40 STLVVLGS----GGHTGEMLRLLEALQDLYSPRSYI-AADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSWLTSV 114 (211)
T ss_pred eEEEEEcC----CCcHHHHHHHHHHHHhhcCceEEE-EecCchhhHHHHHhhhccccccchhheecchhhhhhhhhhhhH
Confidence 46889985 899999999999999999877666 8999999887755443 34445555677
Q ss_pred HHHHhhhhhcCCceEEEcceEEEecC
Q 018547 152 WKIFTDCFNCLPVAALINEKILCMHG 177 (354)
Q Consensus 152 ~~~~~~~f~~LPlaaii~~~il~vHg 177 (354)
|..+...+.++++...+..+++.+-|
T Consensus 115 ~Tti~all~s~~lv~RirPdlil~NG 140 (211)
T KOG3339|consen 115 FTTIWALLQSFVLVWRIRPDLILCNG 140 (211)
T ss_pred HHHHHHHHHHheEEEecCCCEEEECC
Confidence 88888888888888777777777777
No 107
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=83.71 E-value=1.2 Score=51.10 Aligned_cols=65 Identities=18% Similarity=0.110 Sum_probs=38.8
Q ss_pred cEEEEeCCCCCH---HHHHHHHHhCCC-CCCCcEEeecCcccCCCCcH-----HHHHHHHHHHHhCCCcEEEeCCCchh
Q 018547 61 PIRICGDVHGQY---QDLLRLFEHGGY-PPTANYLFLGDYVDRGKQSL-----ETICLLLAYKIRYPDKIHLLRGNHED 130 (354)
Q Consensus 61 ~i~ViGDIHG~~---~~L~~il~~~g~-~~~~~~vfLGDyVDRG~~s~-----evl~ll~~Lk~~~p~~v~lLrGNHE~ 130 (354)
.|+.++|+||.+ ..+..+++...- .++.-++..||+++..+.+. .++.++-++. --+...||||.
T Consensus 662 ~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~lg-----~d~~~~GNHEf 735 (1163)
T PRK09419 662 TILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEMG-----YDASTFGNHEF 735 (1163)
T ss_pred EEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCcC-----CCEEEeccccc
Confidence 588899999975 444445544322 22333344899999876442 3344443331 22568899997
No 108
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=83.16 E-value=2.6 Score=40.46 Aligned_cols=68 Identities=16% Similarity=0.087 Sum_probs=47.5
Q ss_pred CcEEEEeCCCCC--HHHHHHHHHhCCCCCC-CcEEeecCcccCC-CCcHHHHHHHHHHHHhCCCcEEEeCCCchhhh
Q 018547 60 APIRICGDVHGQ--YQDLLRLFEHGGYPPT-ANYLFLGDYVDRG-KQSLETICLLLAYKIRYPDKIHLLRGNHEDAK 132 (354)
Q Consensus 60 ~~i~ViGDIHG~--~~~L~~il~~~g~~~~-~~~vfLGDyVDRG-~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~ 132 (354)
|+|.++|||=|. ...+...|..+..... +-+|..||....| .-+-++...|..+ +-+++-+ |||+.-.
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~----GvDviT~-GNH~~Dk 72 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQS----GVNYITM-GNHTWFQ 72 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhc----CCCEEEc-cchhccC
Confidence 579999999999 5666677666544333 4455689999766 4567777777654 4456666 9999853
No 109
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=82.37 E-value=2.4 Score=40.62 Aligned_cols=66 Identities=18% Similarity=0.147 Sum_probs=36.8
Q ss_pred cEEEEeCCCCCH---------------------HHHHHHHHhCCC-CCCCcEEeecCcccCCCCc-----HHHHHHHHHH
Q 018547 61 PIRICGDVHGQY---------------------QDLLRLFEHGGY-PPTANYLFLGDYVDRGKQS-----LETICLLLAY 113 (354)
Q Consensus 61 ~i~ViGDIHG~~---------------------~~L~~il~~~g~-~~~~~~vfLGDyVDRG~~s-----~evl~ll~~L 113 (354)
.++-++|+||++ ..+..+++.... .++.-++..||+++..+.+ ..++..+
T Consensus 2 ~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~l--- 78 (281)
T cd07409 2 TILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFM--- 78 (281)
T ss_pred EEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHH---
Confidence 467789999875 344455554332 2333455589999876533 2223333
Q ss_pred HHhCCCcEEEeCCCchhh
Q 018547 114 KIRYPDKIHLLRGNHEDA 131 (354)
Q Consensus 114 k~~~p~~v~lLrGNHE~~ 131 (354)
+.. .-.+.. .||||..
T Consensus 79 n~~-g~D~~~-lGNHefd 94 (281)
T cd07409 79 NLL-GYDAMT-LGNHEFD 94 (281)
T ss_pred Hhc-CCCEEE-ecccccc
Confidence 222 223444 4999974
No 110
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=80.47 E-value=2.7 Score=37.99 Aligned_cols=72 Identities=14% Similarity=0.197 Sum_probs=40.7
Q ss_pred EEEEeCCCCC-----HHHHHHHHHhCC-CCCCCcEEeecCcccCCCCcH------------H-HHHHHHHH--HHhCCCc
Q 018547 62 IRICGDVHGQ-----YQDLLRLFEHGG-YPPTANYLFLGDYVDRGKQSL------------E-TICLLLAY--KIRYPDK 120 (354)
Q Consensus 62 i~ViGDIHG~-----~~~L~~il~~~g-~~~~~~~vfLGDyVDRG~~s~------------e-vl~ll~~L--k~~~p~~ 120 (354)
|++++|+|=. ++.|.++|+... -..-+.+|++|+++|.-.... + .+..+.+. ++..--+
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 5677887764 667788888776 555678999999999632221 1 11111111 1112348
Q ss_pred EEEeCCCchhhhh
Q 018547 121 IHLLRGNHEDAKI 133 (354)
Q Consensus 121 v~lLrGNHE~~~i 133 (354)
|+++.|+||....
T Consensus 81 vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 81 VVLVPGPNDPTSS 93 (209)
T ss_dssp EEEE--TTCTT-S
T ss_pred EEEeCCCcccccc
Confidence 9999999998754
No 111
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=78.81 E-value=3.4 Score=39.01 Aligned_cols=56 Identities=25% Similarity=0.169 Sum_probs=34.1
Q ss_pred CCHHHHHHHHHhCCCC-CCCcEEeecCcccCCCCc-----HHHHHHHHHHHHhCCCcEEEeCCCchh
Q 018547 70 GQYQDLLRLFEHGGYP-PTANYLFLGDYVDRGKQS-----LETICLLLAYKIRYPDKIHLLRGNHED 130 (354)
Q Consensus 70 G~~~~L~~il~~~g~~-~~~~~vfLGDyVDRG~~s-----~evl~ll~~Lk~~~p~~v~lLrGNHE~ 130 (354)
|.+..+..+++...-. ++.-+|..||+++.++.+ ..++..+-.+. --+...||||.
T Consensus 21 gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~-----~d~~~~GNHef 82 (257)
T cd07406 21 GGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALG-----VDLACFGNHEF 82 (257)
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcC-----CcEEeeccccc
Confidence 4467777777764433 334566799999877532 34444444332 12556799996
No 112
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=76.85 E-value=3.1 Score=39.96 Aligned_cols=66 Identities=20% Similarity=0.025 Sum_probs=35.1
Q ss_pred cEEEEeCCCCCHHH----------HHHHHHhCCC-----CCCCcEEeecCcccCCCCc-----HHHHHHHHHHHHhCCCc
Q 018547 61 PIRICGDVHGQYQD----------LLRLFEHGGY-----PPTANYLFLGDYVDRGKQS-----LETICLLLAYKIRYPDK 120 (354)
Q Consensus 61 ~i~ViGDIHG~~~~----------L~~il~~~g~-----~~~~~~vfLGDyVDRG~~s-----~evl~ll~~Lk~~~p~~ 120 (354)
.|+...|+||++.. +..+++.... .++.-++-.||.+...+.+ .-++.++-++. -.
T Consensus 2 tIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g----~D 77 (285)
T cd07405 2 TILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVG----YD 77 (285)
T ss_pred EEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhC----Cc
Confidence 36778999998533 3344433221 2334455699998433322 22333333332 23
Q ss_pred EEEeCCCchhh
Q 018547 121 IHLLRGNHEDA 131 (354)
Q Consensus 121 v~lLrGNHE~~ 131 (354)
+. ..||||.-
T Consensus 78 a~-~~GNHEfD 87 (285)
T cd07405 78 AM-AVGNHEFD 87 (285)
T ss_pred EE-eecccccc
Confidence 44 44999964
No 113
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=76.45 E-value=4.2 Score=40.38 Aligned_cols=71 Identities=20% Similarity=0.184 Sum_probs=43.7
Q ss_pred cEEEEeCCCCCHH-----------------HHH--HHHH-hCCCCCCCcEEeecCcccCCCCc---HHHHHHHHHHHHhC
Q 018547 61 PIRICGDVHGQYQ-----------------DLL--RLFE-HGGYPPTANYLFLGDYVDRGKQS---LETICLLLAYKIRY 117 (354)
Q Consensus 61 ~i~ViGDIHG~~~-----------------~L~--~il~-~~g~~~~~~~vfLGDyVDRG~~s---~evl~ll~~Lk~~~ 117 (354)
+|+.+.|+|=.+. |+. .+++ .+.....+-+||+||.|+. ... ..++.-..+=.+.+
T Consensus 55 KIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g-~~t~Da~~sl~kAvaP~I~~ 133 (379)
T KOG1432|consen 55 KILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFG-HSTQDAATSLMKAVAPAIDR 133 (379)
T ss_pred EEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCcccc-cccHhHHHHHHHHhhhHhhc
Confidence 5888999996554 211 1111 1222345778999999986 333 33344444445555
Q ss_pred CCcEEEeCCCchhhh
Q 018547 118 PDKIHLLRGNHEDAK 132 (354)
Q Consensus 118 p~~v~lLrGNHE~~~ 132 (354)
.--...+.||||...
T Consensus 134 ~IPwA~~lGNHDdes 148 (379)
T KOG1432|consen 134 KIPWAAVLGNHDDES 148 (379)
T ss_pred CCCeEEEeccccccc
Confidence 556789999999864
No 114
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=74.63 E-value=3.4 Score=39.87 Aligned_cols=66 Identities=18% Similarity=0.059 Sum_probs=36.2
Q ss_pred cEEEEeCCCCCHHH-------------HHHH---HHh-CCC-CCCCcEEeecCcccCCCCc-------HHHHHHHHHHHH
Q 018547 61 PIRICGDVHGQYQD-------------LLRL---FEH-GGY-PPTANYLFLGDYVDRGKQS-------LETICLLLAYKI 115 (354)
Q Consensus 61 ~i~ViGDIHG~~~~-------------L~~i---l~~-~g~-~~~~~~vfLGDyVDRG~~s-------~evl~ll~~Lk~ 115 (354)
.|+-..|+||++.. +.++ ++. ... .++.-++..||.++.-+.+ .-++.++-.+.
T Consensus 7 tILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~mg- 85 (282)
T cd07407 7 NFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRMMP- 85 (282)
T ss_pred EEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHhcC-
Confidence 57888999998631 2222 221 111 2233455699999765433 12233333332
Q ss_pred hCCCcEEEeCCCchhh
Q 018547 116 RYPDKIHLLRGNHEDA 131 (354)
Q Consensus 116 ~~p~~v~lLrGNHE~~ 131 (354)
-=.+..||||.-
T Consensus 86 ----yDa~tlGNHEFd 97 (282)
T cd07407 86 ----YDLLTIGNHELY 97 (282)
T ss_pred ----CcEEeecccccC
Confidence 225778999994
No 115
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=73.26 E-value=3.9 Score=42.60 Aligned_cols=69 Identities=26% Similarity=0.267 Sum_probs=41.5
Q ss_pred cCcEEEEeCCCCCHH------------HHHH---HHHhCCCC-CCCcEEeecCcccCCC------CcHHHHHHHHHHHHh
Q 018547 59 EAPIRICGDVHGQYQ------------DLLR---LFEHGGYP-PTANYLFLGDYVDRGK------QSLETICLLLAYKIR 116 (354)
Q Consensus 59 ~~~i~ViGDIHG~~~------------~L~~---il~~~g~~-~~~~~vfLGDyVDRG~------~s~evl~ll~~Lk~~ 116 (354)
+-.|+-..|+||++. -+.+ +++...-. ++.-+|=.||+++..+ .....+.++-.++..
T Consensus 26 ~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~yD 105 (517)
T COG0737 26 KLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALGYD 105 (517)
T ss_pred eEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcCCc
Confidence 346888899999998 3322 23322211 2333445999999843 233455565555422
Q ss_pred CCCcEEEeCCCchhhh
Q 018547 117 YPDKIHLLRGNHEDAK 132 (354)
Q Consensus 117 ~p~~v~lLrGNHE~~~ 132 (354)
..-.||||.-.
T Consensus 106 -----a~tiGNHEFd~ 116 (517)
T COG0737 106 -----AMTLGNHEFDY 116 (517)
T ss_pred -----EEeeccccccc
Confidence 57779999853
No 116
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=71.98 E-value=6.8 Score=40.31 Aligned_cols=69 Identities=22% Similarity=0.391 Sum_probs=52.2
Q ss_pred cCcEEEEeCCCCCHHHHHHHHHhCCCC--CCCcEEeecCcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCc
Q 018547 59 EAPIRICGDVHGQYQDLLRLFEHGGYP--PTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNH 128 (354)
Q Consensus 59 ~~~i~ViGDIHG~~~~L~~il~~~g~~--~~~~~vfLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNH 128 (354)
+.+|.|+||.-|+++.|.+-++...-. |-+-++++|++.+-..++-|++.+...- ...|-.++++-+|-
T Consensus 5 ~~kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~-~~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 5 DAKILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGT-KKVPIPTYFLGDNA 75 (528)
T ss_pred CceEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCC-ccCceeEEEecCCC
Confidence 478999999999999998766654332 3466889999999877888887776543 35577778887765
No 117
>PF14164 YqzH: YqzH-like protein
Probab=71.89 E-value=12 Score=28.08 Aligned_cols=45 Identities=20% Similarity=0.362 Sum_probs=38.2
Q ss_pred CChHHHHHHHHHHHcc--CCCccccCCHHHHHHHHHHHHHHHhhCCC
Q 018547 10 MDKVVLDDIIRRLLEG--RGGKQVQLSESEIRQLCVNARQIFLSQPN 54 (354)
Q Consensus 10 ~~~~~~~~~i~~~~~~--~~~~~~~l~~~~i~~l~~~a~~il~~ep~ 54 (354)
|+...++++|.+.++. ......+|++.|...|+......-.++|.
T Consensus 1 M~ek~I~Kmi~~~l~QYg~d~~~~pls~~E~~~L~~~i~~~~~~~~~ 47 (64)
T PF14164_consen 1 MNEKLIEKMIINCLRQYGYDVECMPLSDEEWEELCKHIQERKNEEPD 47 (64)
T ss_pred CcHHHHHHHHHHHHHHhCCcccCCCCCHHHHHHHHHHHHHHHhcCCC
Confidence 5677899999998876 34467899999999999999999999886
No 118
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=69.04 E-value=6.7 Score=38.34 Aligned_cols=65 Identities=20% Similarity=0.103 Sum_probs=38.1
Q ss_pred EEEEeCCCCCHH------HHHHHHHhCCC-----CCCCcEEeecCcccCCCC-------------cHHHHHHHHHHHHhC
Q 018547 62 IRICGDVHGQYQ------DLLRLFEHGGY-----PPTANYLFLGDYVDRGKQ-------------SLETICLLLAYKIRY 117 (354)
Q Consensus 62 i~ViGDIHG~~~------~L~~il~~~g~-----~~~~~~vfLGDyVDRG~~-------------s~evl~ll~~Lk~~~ 117 (354)
|+-..|+||++. .+..+++.... .++.-+|.-||.+.-++. ..-++.++-++...
T Consensus 3 IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g~D- 81 (313)
T cd08162 3 LLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALGVQ- 81 (313)
T ss_pred EEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccCCc-
Confidence 567889999953 33333443211 234556679999875543 23444555444322
Q ss_pred CCcEEEeCCCchhh
Q 018547 118 PDKIHLLRGNHEDA 131 (354)
Q Consensus 118 p~~v~lLrGNHE~~ 131 (354)
.+..||||.-
T Consensus 82 ----a~tlGNHEFD 91 (313)
T cd08162 82 ----AIALGNHEFD 91 (313)
T ss_pred ----EEeccccccc
Confidence 5678999963
No 119
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=65.63 E-value=15 Score=34.93 Aligned_cols=66 Identities=17% Similarity=0.111 Sum_probs=42.1
Q ss_pred cEEEEeCCCCCHH--HHHHHHHhCCCC-CCCcEEeecCcccCC-CCcHHHHHHHHHHHHhCCCcEEEeCCCchhh
Q 018547 61 PIRICGDVHGQYQ--DLLRLFEHGGYP-PTANYLFLGDYVDRG-KQSLETICLLLAYKIRYPDKIHLLRGNHEDA 131 (354)
Q Consensus 61 ~i~ViGDIHG~~~--~L~~il~~~g~~-~~~~~vfLGDyVDRG-~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~ 131 (354)
++.++|||=|.-. .+.+.|...... +.+-++-.||..--| .-+-++...|..+. -.+.-+ ||||..
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G----~D~iTl-GNH~fD 70 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAG----VDVITM-GNHTWD 70 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcC----CCEEEe-cccccC
Confidence 5789999999753 344555543222 223455589998766 36677777776653 344555 999764
No 120
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=63.75 E-value=23 Score=34.45 Aligned_cols=73 Identities=14% Similarity=0.200 Sum_probs=48.2
Q ss_pred CcEEEEeCCCC----CHHHHHHHHHhCC-CCC----CCcEEeecCcccCC----CCcH----HHHHHHHHH-HHhCC---
Q 018547 60 APIRICGDVHG----QYQDLLRLFEHGG-YPP----TANYLFLGDYVDRG----KQSL----ETICLLLAY-KIRYP--- 118 (354)
Q Consensus 60 ~~i~ViGDIHG----~~~~L~~il~~~g-~~~----~~~~vfLGDyVDRG----~~s~----evl~ll~~L-k~~~p--- 118 (354)
..++|+||+|= .+++|.++|+... ..+ ..-+||+|+++-+. ..+. |-++-|..+ ..+||
T Consensus 28 ~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp~L~ 107 (291)
T PTZ00235 28 HNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFKLIL 107 (291)
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhChHHH
Confidence 46899999995 5778888888662 212 34689999999763 2222 333444332 23444
Q ss_pred --CcEEEeCCCchhhh
Q 018547 119 --DKIHLLRGNHEDAK 132 (354)
Q Consensus 119 --~~v~lLrGNHE~~~ 132 (354)
.+++++.|-.|-+.
T Consensus 108 ~~s~fVFVPGpnDPw~ 123 (291)
T PTZ00235 108 EHCYLIFIPGINDPCA 123 (291)
T ss_pred hcCeEEEECCCCCCCc
Confidence 58999999999753
No 121
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=62.60 E-value=9.5 Score=41.18 Aligned_cols=69 Identities=17% Similarity=0.081 Sum_probs=41.2
Q ss_pred ecCcEEEEeCCCCCHHH----------------HHHHHHhCCC-CCCCcEEeecCcccCCCCcH-------------HHH
Q 018547 58 VEAPIRICGDVHGQYQD----------------LLRLFEHGGY-PPTANYLFLGDYVDRGKQSL-------------ETI 107 (354)
Q Consensus 58 l~~~i~ViGDIHG~~~~----------------L~~il~~~g~-~~~~~~vfLGDyVDRG~~s~-------------evl 107 (354)
..-+|.-..|+||++.. +..+++...- .++.-+|-.||.+...+.+- -++
T Consensus 24 ~~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~i 103 (649)
T PRK09420 24 VDLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPVY 103 (649)
T ss_pred ceEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchHH
Confidence 45678889999998743 2333333221 13445667999998665431 244
Q ss_pred HHHHHHHHhCCCcEEEeCCCchhh
Q 018547 108 CLLLAYKIRYPDKIHLLRGNHEDA 131 (354)
Q Consensus 108 ~ll~~Lk~~~p~~v~lLrGNHE~~ 131 (354)
..+-.+.. =....||||.-
T Consensus 104 ~amN~lgy-----Da~tlGNHEFd 122 (649)
T PRK09420 104 KAMNTLDY-----DVGNLGNHEFN 122 (649)
T ss_pred HHHHhcCC-----cEEeccchhhh
Confidence 55444432 25778999963
No 122
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=62.40 E-value=11 Score=39.53 Aligned_cols=68 Identities=19% Similarity=0.047 Sum_probs=36.9
Q ss_pred cCcEEEEeCCCCCHH----------HHHHHHHhCC-----CCCCCcEEeecCcccCCCCc-----HHHHHHHHHHHHhCC
Q 018547 59 EAPIRICGDVHGQYQ----------DLLRLFEHGG-----YPPTANYLFLGDYVDRGKQS-----LETICLLLAYKIRYP 118 (354)
Q Consensus 59 ~~~i~ViGDIHG~~~----------~L~~il~~~g-----~~~~~~~vfLGDyVDRG~~s-----~evl~ll~~Lk~~~p 118 (354)
+-.|+-+.|+||++. .+..+++... ..++.-+|.-||.+...+.+ .-++.++-.+ +
T Consensus 34 ~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~----g 109 (551)
T PRK09558 34 KITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLI----G 109 (551)
T ss_pred EEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcC----C
Confidence 445888999999874 2223333321 12345566799998643322 1223333322 2
Q ss_pred CcEEEeCCCchhh
Q 018547 119 DKIHLLRGNHEDA 131 (354)
Q Consensus 119 ~~v~lLrGNHE~~ 131 (354)
-.+.. .||||.-
T Consensus 110 ~Da~t-lGNHEFD 121 (551)
T PRK09558 110 YDAMA-VGNHEFD 121 (551)
T ss_pred CCEEc-ccccccC
Confidence 24444 4999974
No 123
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=62.23 E-value=14 Score=37.60 Aligned_cols=72 Identities=7% Similarity=-0.034 Sum_probs=40.4
Q ss_pred CcEEEEeCCCCCHHHHH---HHHHhC-CCCCCCcEEeecCcccCCCCcHH------HHHHHHHHHH-hCCCcEEEeCCCc
Q 018547 60 APIRICGDVHGQYQDLL---RLFEHG-GYPPTANYLFLGDYVDRGKQSLE------TICLLLAYKI-RYPDKIHLLRGNH 128 (354)
Q Consensus 60 ~~i~ViGDIHG~~~~L~---~il~~~-g~~~~~~~vfLGDyVDRG~~s~e------vl~ll~~Lk~-~~p~~v~lLrGNH 128 (354)
-+.+++||-=+-...-. +.+... ...+.+-+|-+||-++.|..++. .++-++.-+. .-.-.++++.|||
T Consensus 27 l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~vLGNH 106 (394)
T PTZ00422 27 LRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQIPFFTVLGQA 106 (394)
T ss_pred EEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCCCeEEeCCcc
Confidence 36899999643222211 122221 12344567789999988877653 2333332211 0122789999999
Q ss_pred hhh
Q 018547 129 EDA 131 (354)
Q Consensus 129 E~~ 131 (354)
|..
T Consensus 107 Dy~ 109 (394)
T PTZ00422 107 DWD 109 (394)
T ss_pred ccc
Confidence 973
No 124
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=60.95 E-value=9.9 Score=40.85 Aligned_cols=67 Identities=18% Similarity=0.065 Sum_probs=38.7
Q ss_pred CcEEEEeCCCCCHHH----------------HHHHHHhCCCC-CCCcEEeecCcccCCCCc-------------HHHHHH
Q 018547 60 APIRICGDVHGQYQD----------------LLRLFEHGGYP-PTANYLFLGDYVDRGKQS-------------LETICL 109 (354)
Q Consensus 60 ~~i~ViGDIHG~~~~----------------L~~il~~~g~~-~~~~~vfLGDyVDRG~~s-------------~evl~l 109 (354)
-+|+-..|+||++.. +..+++...-. ++.-+|-.||.+...+.+ .-++.+
T Consensus 3 l~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~ 82 (626)
T TIGR01390 3 LRIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKA 82 (626)
T ss_pred EEEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHH
Confidence 357788999999743 33344432211 234566699999865433 123444
Q ss_pred HHHHHHhCCCcEEEeCCCchhh
Q 018547 110 LLAYKIRYPDKIHLLRGNHEDA 131 (354)
Q Consensus 110 l~~Lk~~~p~~v~lLrGNHE~~ 131 (354)
+-.|.. =....||||.-
T Consensus 83 mN~lgy-----Da~tlGNHEFd 99 (626)
T TIGR01390 83 MNLLKY-----DVGNLGNHEFN 99 (626)
T ss_pred HhhcCc-----cEEeccccccc
Confidence 433322 15778999963
No 125
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=60.01 E-value=9.9 Score=43.79 Aligned_cols=23 Identities=39% Similarity=0.538 Sum_probs=16.2
Q ss_pred hHHHHHHHHh-CCCceEEEeeeee
Q 018547 232 SDVVADFLDK-NDLDLICRGHQVV 254 (354)
Q Consensus 232 ~~~~~~fL~~-~~l~~IIRgHq~v 254 (354)
++++.+..++ -+++.||-||++.
T Consensus 256 en~~~~la~~~~gID~Il~GHsH~ 279 (1163)
T PRK09419 256 EDSVYDLAEKTKGIDAIVAGHQHG 279 (1163)
T ss_pred chHHHHHHHhCCCCcEEEeCCCcc
Confidence 3445556644 5899999999875
No 126
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=59.73 E-value=5.4 Score=41.10 Aligned_cols=41 Identities=24% Similarity=0.417 Sum_probs=32.5
Q ss_pred CcEEeecCcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCchhhhh
Q 018547 88 ANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKI 133 (354)
Q Consensus 88 ~~~vfLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~i 133 (354)
+.+=.+||+-||||++-.+++-|..+- .+=+--||||--++
T Consensus 192 DhLHiVGDIyDRGP~pd~Imd~L~~yh-----svDiQWGNHDilWm 232 (648)
T COG3855 192 DHLHIVGDIYDRGPYPDKIMDTLINYH-----SVDIQWGNHDILWM 232 (648)
T ss_pred hheeeecccccCCCCchHHHHHHhhcc-----cccccccCcceEEe
Confidence 445579999999999999998886652 45677899997655
No 127
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=56.65 E-value=18 Score=34.99 Aligned_cols=93 Identities=18% Similarity=0.174 Sum_probs=54.4
Q ss_pred cCCHHHHHHHHHHHHHHHhhCCCeeee---------cCcEEEEeCCCCCHHHHHHHHHhCCCCCCCcEEeecCcccCCCC
Q 018547 32 QLSESEIRQLCVNARQIFLSQPNLVEV---------EAPIRICGDVHGQYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQ 102 (354)
Q Consensus 32 ~l~~~~i~~l~~~a~~il~~ep~vl~l---------~~~i~ViGDIHG~~~~L~~il~~~g~~~~~~~vfLGDyVDRG~~ 102 (354)
+++++......+.++..=.-+|+|-.+ ..+.+.++|.|+...+.. ..|+.+.++-+||+..-|.
T Consensus 25 ~~ssnpt~a~~~~~~~q~~~kp~vkpi~~~ap~~~~~~r~VcisdtH~~~~~i~------~~p~gDvlihagdfT~~g~- 97 (305)
T KOG3947|consen 25 EYSSNPTQAFTFYNKNQRRFKPPVKPIRLDAPVGPGYARFVCISDTHELTFDIN------DIPDGDVLIHAGDFTNLGL- 97 (305)
T ss_pred CcCCChHHHHHHHHHhcCcccCCCCCcCCCCCCCCCceEEEEecCcccccCccc------cCCCCceEEeccCCccccC-
Confidence 456666555555555444445544333 145899999998766553 2455566678999877553
Q ss_pred cHHHHHHHHHHHHhCCC-cEEEeCCCchhhh
Q 018547 103 SLETICLLLAYKIRYPD-KIHLLRGNHEDAK 132 (354)
Q Consensus 103 s~evl~ll~~Lk~~~p~-~v~lLrGNHE~~~ 132 (354)
+-||..+=-.+ -..|- .=+.|+||||.-.
T Consensus 98 ~~ev~~fn~~~-gslph~yKIVIaGNHELtF 127 (305)
T KOG3947|consen 98 PEEVIKFNEWL-GSLPHEYKIVIAGNHELTF 127 (305)
T ss_pred HHHHHhhhHHh-ccCcceeeEEEeeccceee
Confidence 34444332211 11222 3478999999853
No 128
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=49.09 E-value=21 Score=39.58 Aligned_cols=67 Identities=21% Similarity=0.123 Sum_probs=38.7
Q ss_pred CcEEEEeCCCCCHHHH----------------HHHHHhCCC-CCCCcEEeecCcccCCCCc--------------HHHHH
Q 018547 60 APIRICGDVHGQYQDL----------------LRLFEHGGY-PPTANYLFLGDYVDRGKQS--------------LETIC 108 (354)
Q Consensus 60 ~~i~ViGDIHG~~~~L----------------~~il~~~g~-~~~~~~vfLGDyVDRG~~s--------------~evl~ 108 (354)
-+|+-..|+||++... ..+++...- .++.-+|-.||.+..-+.+ .-++.
T Consensus 116 LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i~ 195 (814)
T PRK11907 116 VRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMYA 195 (814)
T ss_pred EEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHHHH
Confidence 4588899999996432 223333211 1334566799999764432 12455
Q ss_pred HHHHHHHhCCCcEEEeCCCchhh
Q 018547 109 LLLAYKIRYPDKIHLLRGNHEDA 131 (354)
Q Consensus 109 ll~~Lk~~~p~~v~lLrGNHE~~ 131 (354)
++-.|.. =..-.||||.-
T Consensus 196 amN~LGy-----DA~tLGNHEFD 213 (814)
T PRK11907 196 ALEALGF-----DAGTLGNHEFN 213 (814)
T ss_pred HHhccCC-----CEEEechhhcc
Confidence 5544432 25778999963
No 129
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=48.94 E-value=28 Score=36.79 Aligned_cols=41 Identities=24% Similarity=0.063 Sum_probs=24.0
Q ss_pred CCCcEEeecCcccCCCCc-----HHHHHHHHHHHHhCCCcEEEeCCCchhh
Q 018547 86 PTANYLFLGDYVDRGKQS-----LETICLLLAYKIRYPDKIHLLRGNHEDA 131 (354)
Q Consensus 86 ~~~~~vfLGDyVDRG~~s-----~evl~ll~~Lk~~~p~~v~lLrGNHE~~ 131 (354)
++.-+|.-||.+...+.+ ...+.++-++. -=....||||.-
T Consensus 49 ~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~g-----~Da~~lGNHEFd 94 (550)
T TIGR01530 49 KNALVLHAGDAIIGTLYFTLFGGRADAALMNAAG-----FDFFTLGNHEFD 94 (550)
T ss_pred CCeEEEECCCCCCCccchhhcCCHHHHHHHhccC-----CCEEEecccccc
Confidence 345566799998765433 22334333332 226778999964
No 130
>PF10083 DUF2321: Uncharacterized protein conserved in bacteria (DUF2321); InterPro: IPR016891 This entry is represented by Bacteriophage 'Lactobacillus prophage Lj928', Orf-Ljo1454. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=39.30 E-value=9.3 Score=33.71 Aligned_cols=47 Identities=19% Similarity=0.261 Sum_probs=31.8
Q ss_pred eecChHHHHHHHHhCCCce---------EEEeeeeecCCeEEecCCeEEEEeeCCCCCCCCC
Q 018547 228 CTFGSDVVADFLDKNDLDL---------ICRGHQVVEDGYEFFARRRLVTIFSAPNYGGEFD 280 (354)
Q Consensus 228 ~~fG~~~~~~fL~~~~l~~---------IIRgHq~v~~G~~~~~~~~~iTvfSa~~Y~~~~~ 280 (354)
+.-+++..+.||.+-|.+. -|||+-.+++.+.+..+ +.+|.||.+++
T Consensus 20 ~~~~p~~~~~fC~kCG~~tI~~Cp~C~~~IrG~y~v~gv~~~g~~------~~~PsYC~~CG 75 (158)
T PF10083_consen 20 YDKNPELREKFCSKCGAKTITSCPNCSTPIRGDYHVEGVFGLGGH------YEAPSYCHNCG 75 (158)
T ss_pred cccCchHHHHHHHHhhHHHHHHCcCCCCCCCCceecCCeeeeCCC------CCCChhHHhCC
Confidence 3445677788888886554 48999888655544333 56999997444
No 131
>PF15007 CEP44: Centrosomal spindle body, CEP44
Probab=38.45 E-value=20 Score=30.88 Aligned_cols=83 Identities=25% Similarity=0.456 Sum_probs=45.8
Q ss_pred CCCCCHHHHHHHHHhCCCCCCCcE--EeecCcccCCCCcHHHHHHHHHHHHhCCCcEE--EeCCCchhhhhHhhhCChHH
Q 018547 67 DVHGQYQDLLRLFEHGGYPPTANY--LFLGDYVDRGKQSLETICLLLAYKIRYPDKIH--LLRGNHEDAKINRIYGFYDE 142 (354)
Q Consensus 67 DIHG~~~~L~~il~~~g~~~~~~~--vfLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~--lLrGNHE~~~i~~~~gf~~e 142 (354)
|+.|++..|++.|+.+++|.+-++ +-.|| +...+.++-..-..|+..|. ++.=++| ....
T Consensus 1 Dl~~~l~~L~~~Lr~~~yp~~vd~~~l~~G~-------p~afLpil~~~L~~yS~~va~~l~~~g~e---------L~~k 64 (131)
T PF15007_consen 1 DLKGNLRRLEQELRSLKYPDEVDYQGLYKGD-------PSAFLPILHYALLSYSTHVARLLVDRGYE---------LYGK 64 (131)
T ss_pred ChhhHHHHHHHHHHHCCCCCccCHHHHhcCC-------HHHHHHHHHHHHHcCCHHHHHHHHHcCch---------hhcC
Confidence 899999999999999999854332 23444 22222222222234443331 2222222 1222
Q ss_pred HHHHHhHHhHHHHhhhhhcCCce
Q 018547 143 CKRRFNVRLWKIFTDCFNCLPVA 165 (354)
Q Consensus 143 ~~~~~~~~~~~~~~~~f~~LPla 165 (354)
--.++-+.+|+.+.+.|.+-|.-
T Consensus 65 ~D~RF~E~vyk~LRdef~YkP~l 87 (131)
T PF15007_consen 65 NDLRFVESVYKLLRDEFNYKPSL 87 (131)
T ss_pred ChHHHHHHHHHHHHHHhCCCCCC
Confidence 23445567777777777777764
No 132
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=33.61 E-value=1.2e+02 Score=23.38 Aligned_cols=72 Identities=14% Similarity=0.053 Sum_probs=46.9
Q ss_pred eecCcEEEEeCCCCCHHHHHHHHHhCCC--CCCCcEEeecCcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCc
Q 018547 57 EVEAPIRICGDVHGQYQDLLRLFEHGGY--PPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNH 128 (354)
Q Consensus 57 ~l~~~i~ViGDIHG~~~~L~~il~~~g~--~~~~~~vfLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNH 128 (354)
.....+.|+=|---|.+.+..+++.+.. +....++.+|+.-|+|..+.+....+-.+...+...+++...|+
T Consensus 9 ~~~~~~~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~~ 82 (91)
T PF02875_consen 9 REPNGPTVIDDYAHNPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDNP 82 (91)
T ss_dssp EEETTEEEEEET--SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSBT
T ss_pred eeCCCcEEEEECCCCHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCCC
Confidence 3334577788866688888888776532 34556778999999888887766666666656666666655554
No 133
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=32.86 E-value=51 Score=36.54 Aligned_cols=67 Identities=18% Similarity=0.104 Sum_probs=38.1
Q ss_pred cCcEEEEeCCCCCHHH----------------HHHHHHhCCC-CCCCcEEeecCcccCCCCc------------------
Q 018547 59 EAPIRICGDVHGQYQD----------------LLRLFEHGGY-PPTANYLFLGDYVDRGKQS------------------ 103 (354)
Q Consensus 59 ~~~i~ViGDIHG~~~~----------------L~~il~~~g~-~~~~~~vfLGDyVDRG~~s------------------ 103 (354)
.-+|+-..|+||++.. +..+++...- .++.-+|-.||.+-.-+.+
T Consensus 39 ~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGspl~~~~~~~~~~~~~~~~~~~ 118 (780)
T PRK09418 39 NLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGTPLGDYVANKINDPKKPVDPSY 118 (780)
T ss_pred EEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCchHHHHHhhccccccccccccc
Confidence 4568899999999632 2233333211 1344566799988543321
Q ss_pred -HHHHHHHHHHHHhCCCcEEEeCCCchh
Q 018547 104 -LETICLLLAYKIRYPDKIHLLRGNHED 130 (354)
Q Consensus 104 -~evl~ll~~Lk~~~p~~v~lLrGNHE~ 130 (354)
.-++.++-.|... ....||||.
T Consensus 119 ~~p~i~~mN~lgyD-----a~tlGNHEF 141 (780)
T PRK09418 119 THPLYRLMNLMKYD-----VISLGNHEF 141 (780)
T ss_pred chHHHHHHhccCCC-----EEecccccc
Confidence 2344544444321 567899995
No 134
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=32.07 E-value=39 Score=36.27 Aligned_cols=42 Identities=24% Similarity=0.425 Sum_probs=35.0
Q ss_pred cEEeecCcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCchhhhhHh
Q 018547 89 NYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINR 135 (354)
Q Consensus 89 ~~vfLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE~~~i~~ 135 (354)
++-.+||+.||||.+-.+++.|+.. .+|=+--||||--++..
T Consensus 187 hLHIvGDIyDRGp~pd~ImD~Lm~~-----hsvDIQWGNHDIlWMGA 228 (640)
T PF06874_consen 187 HLHIVGDIYDRGPRPDKIMDRLMNY-----HSVDIQWGNHDILWMGA 228 (640)
T ss_pred heeecccccCCCCChhHHHHHHhcC-----CCccccccchHHHHHHH
Confidence 4557999999999999999999865 26778889999987744
No 135
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=30.68 E-value=1.6e+02 Score=28.18 Aligned_cols=58 Identities=22% Similarity=0.331 Sum_probs=32.4
Q ss_pred CCcEEEeCCCchhhhhHhhhCChHHHH-HHH-hHHhHHHHhhhhhcCCceEEEc-ceEEEecCCCCCC
Q 018547 118 PDKIHLLRGNHEDAKINRIYGFYDECK-RRF-NVRLWKIFTDCFNCLPVAALIN-EKILCMHGGLSPE 182 (354)
Q Consensus 118 p~~v~lLrGNHE~~~i~~~~gf~~e~~-~~~-~~~~~~~~~~~f~~LPlaaii~-~~il~vHgGisp~ 182 (354)
-++|++|-||||.- .|+.|. .... .+. ....| +.+..+|++-.-. .+++-.|-||-.+
T Consensus 127 nknvvvlagnhein-~ngny~--arlanhkls~gDTY----nlIKtldVC~YD~erkvltsHHGIird 187 (318)
T PF13258_consen 127 NKNVVVLAGNHEIN-FNGNYM--ARLANHKLSAGDTY----NLIKTLDVCNYDPERKVLTSHHGIIRD 187 (318)
T ss_pred ccceEEEecCceec-cCchHH--HHHhhCCCCccchh----hccccccccccCcchhhhhcccCceec
Confidence 35899999999985 233331 0000 011 12233 3456777774322 3688889998653
No 136
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=30.13 E-value=2e+02 Score=25.22 Aligned_cols=102 Identities=17% Similarity=0.268 Sum_probs=58.0
Q ss_pred EEEeCCCCCHHHHHHHHHh-CCC------------CCCCcEEeecCcccCCCCcHHHHHHHHHHHHhCCCcEEEeCCCch
Q 018547 63 RICGDVHGQYQDLLRLFEH-GGY------------PPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHE 129 (354)
Q Consensus 63 ~ViGDIHG~~~~L~~il~~-~g~------------~~~~~~vfLGDyVDRG~~s~evl~ll~~Lk~~~p~~v~lLrGNHE 129 (354)
++.+=.+||-..+.+.+.. ++- ..+.++||+|-.+|+|.-+-++..+|-.|+ +.+|++. |-
T Consensus 2 IvYsS~TGNTkkvA~aI~~~l~~~~~~~~~~~~~~~~~yD~i~lG~w~d~G~~d~~~~~fl~~l~---~KkV~lF-~T-- 75 (160)
T PF12641_consen 2 IVYSSRTGNTKKVAEAIAEALGAKDIVSVEEPPEDLEDYDLIFLGFWIDKGTPDKDMKEFLKKLK---GKKVALF-GT-- 75 (160)
T ss_pred EEEECCCChHHHHHHHHHHHCCCceeEeccccccCCCCCCEEEEEcCccCCCCCHHHHHHHHHcc---CCeEEEE-Ee--
Confidence 3445556666666554432 222 234579999999999999999999987764 4566554 21
Q ss_pred hhhhHhhhCChHHHHHHHhHHhHHHHhhhhhcCCceEEEcceEEEecCCCCCCC
Q 018547 130 DAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALINEKILCMHGGLSPEL 183 (354)
Q Consensus 130 ~~~i~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaaii~~~il~vHgGisp~~ 183 (354)
.|+.. ...|...+.+....++.. ...+- +.|+|+|-++|.+
T Consensus 76 -------~G~~~--~s~~~~~~~~~~~~~~~~---~~~~l-g~f~CqGk~~~~~ 116 (160)
T PF12641_consen 76 -------AGAGP--DSEYAKKILKNVEALLPK---GNEIL-GTFMCQGKMDPKV 116 (160)
T ss_pred -------cCCCC--chHHHHHHHHHHHHhhcc---CCeec-ceEEeCCcCCHHH
Confidence 12211 112222333333333322 22222 4788899998844
No 137
>COG4320 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=29.82 E-value=1.1e+02 Score=30.44 Aligned_cols=60 Identities=18% Similarity=0.369 Sum_probs=39.7
Q ss_pred HHhhCCCeeeecCcEEEEeCCC-CCHHHHHHHHHhCCCCCCCcEEe-ecCccc--CCCCcHHHHHHHHHHHH
Q 018547 48 IFLSQPNLVEVEAPIRICGDVH-GQYQDLLRLFEHGGYPPTANYLF-LGDYVD--RGKQSLETICLLLAYKI 115 (354)
Q Consensus 48 il~~ep~vl~l~~~i~ViGDIH-G~~~~L~~il~~~g~~~~~~~vf-LGDyVD--RG~~s~evl~ll~~Lk~ 115 (354)
-+++-|-.++-.+.+.|+||.| |||.++.. .+..++| +-|+=. -|+...+++.+..+|..
T Consensus 45 ~~~~~p~~lp~~p~tw~cGD~HLgN~ga~~~--------~~G~V~f~i~DFDe~~~g~~~~DlvRl~~Sl~~ 108 (410)
T COG4320 45 DMKTWPWSLPKTPFTWLCGDAHLGNFGAARN--------SKGNVVFKIADFDEGHLGQYIWDLVRLAVSLVL 108 (410)
T ss_pred HHhcCccccCCCCceEEecccccccchhhcc--------CCCceEEEecccchhhccchHHHHHHHHHHHHH
Confidence 3456676667677899999999 67776632 2233444 566421 36777888888877754
No 138
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=29.72 E-value=94 Score=32.18 Aligned_cols=34 Identities=12% Similarity=0.149 Sum_probs=26.7
Q ss_pred HHHHHHHHhCCCceEEEeeeeecCCeEEecCCeE
Q 018547 233 DVVADFLDKNDLDLICRGHQVVEDGYEFFARRRL 266 (354)
Q Consensus 233 ~~~~~fL~~~~l~~IIRgHq~v~~G~~~~~~~~~ 266 (354)
..++..+-++++++++-||...-+....-.+.++
T Consensus 322 ~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~ 355 (452)
T KOG1378|consen 322 EGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTC 355 (452)
T ss_pred HHHHHHHHHhceeEEEeccceehhccchhhccee
Confidence 3689999999999999999987666555455544
No 139
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=27.61 E-value=1.1e+02 Score=28.32 Aligned_cols=40 Identities=23% Similarity=0.335 Sum_probs=29.0
Q ss_pred HHHHHHhCCCceEEEeeeeecCCeEEecCCeEEEEeeCCCCC
Q 018547 235 VADFLDKNDLDLICRGHQVVEDGYEFFARRRLVTIFSAPNYG 276 (354)
Q Consensus 235 ~~~fL~~~~l~~IIRgHq~v~~G~~~~~~~~~iTvfSa~~Y~ 276 (354)
+.+.|-..|+++||-||..+..+++.. ++++| +||-=|+.
T Consensus 197 ~A~~l~~~G~DvIiG~H~H~~~~~e~~-~~~~I-~YslGNfi 236 (239)
T smart00854 197 LAHALIDAGADVVIGHHPHVLQPIEIY-KGKLI-AYSLGNFI 236 (239)
T ss_pred HHHHHHHcCCCEEEcCCCCcCCceEEE-CCEEE-EEcccccc
Confidence 334444479999999999999999876 45555 67765553
No 140
>PRK02135 hypothetical protein; Provisional
Probab=24.78 E-value=3.4e+02 Score=25.06 Aligned_cols=72 Identities=18% Similarity=0.251 Sum_probs=41.2
Q ss_pred CCChHHHHHHHHHHHccCCC---c-------cccCCHHHHHHHHHHHHHHHhhCCCeeee-------------cCcEEEE
Q 018547 9 MMDKVVLDDIIRRLLEGRGG---K-------QVQLSESEIRQLCVNARQIFLSQPNLVEV-------------EAPIRIC 65 (354)
Q Consensus 9 ~~~~~~~~~~i~~~~~~~~~---~-------~~~l~~~~i~~l~~~a~~il~~ep~vl~l-------------~~~i~Vi 65 (354)
.++...+..+|+++|+...+ . -+......+.+++++. .+..+++.+ ..|++|.
T Consensus 77 ~PDErs~a~~I~kAL~~~~~~~~~~~~e~~pGi~V~~~~fe~ll~~~----~e~~~l~~L~e~G~~i~~~~~~~~~~FvL 152 (201)
T PRK02135 77 NPDERSTAALIKKALDASEGMIGEQEREVTPGIYVRRRGFEDLLEEL----AEGKTLYYLHEDGEDIRDVEFPENPVFVL 152 (201)
T ss_pred CccHHHHHHHHHHHHhcccccccccccccCCCEEEecCCHHHHHHHH----hcCCcEEEEeCCCCchhhccCCCCCEEEE
Confidence 45666788888888876411 1 0122233444455443 333344433 2457888
Q ss_pred eCCCCCHHHHHHHHHhCCC
Q 018547 66 GDVHGQYQDLLRLFEHGGY 84 (354)
Q Consensus 66 GDIHG~~~~L~~il~~~g~ 84 (354)
||=+|=-.+-.+.|+..|.
T Consensus 153 gDH~~~~~ee~~~L~~~ga 171 (201)
T PRK02135 153 GDHIGFTEEEENLLKRLGA 171 (201)
T ss_pred eCCCCCCHHHHHHHHHhCC
Confidence 8888877777777776643
No 141
>PRK10773 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed
Probab=23.70 E-value=4.4e+02 Score=26.85 Aligned_cols=67 Identities=13% Similarity=0.043 Sum_probs=47.4
Q ss_pred cCcEEEEeCCCC-CHHHHHHHHHhCCCCCCCcEEeecCcccCCCCcHHHHHHHHHHHHhC-CCcEEEeCC
Q 018547 59 EAPIRICGDVHG-QYQDLLRLFEHGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRY-PDKIHLLRG 126 (354)
Q Consensus 59 ~~~i~ViGDIHG-~~~~L~~il~~~g~~~~~~~vfLGDyVDRG~~s~evl~ll~~Lk~~~-p~~v~lLrG 126 (354)
...+.||=|-+. +.+.+.+.|+.+...+..+++.+||+...|+.+.+...-+..+.... .+.++++ |
T Consensus 324 ~~g~~iIDDsYn~nP~s~~aaL~~l~~~~~r~i~VlG~m~elG~~~~~~h~~~~~~~~~~~~d~v~~~-G 392 (453)
T PRK10773 324 AEGQLLLDDSYNANVGSMTAAAQVLAEMPGYRVMVVGDMAELGAESEACHRQVGEAAKAAGIDKVLSV-G 392 (453)
T ss_pred CCCeEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEECChhhcchHHHHHHHHHHHHHHHcCCCEEEEE-C
Confidence 346888999655 67888887776543344578899999999999998877776654444 3455444 6
No 142
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=21.41 E-value=68 Score=30.79 Aligned_cols=39 Identities=23% Similarity=0.455 Sum_probs=25.0
Q ss_pred cEEeecCcccCCCCcHHHH-HHHHHHHHhCCCcEEEeCCCchhh
Q 018547 89 NYLFLGDYVDRGKQSLETI-CLLLAYKIRYPDKIHLLRGNHEDA 131 (354)
Q Consensus 89 ~~vfLGDyVDRG~~s~evl-~ll~~Lk~~~p~~v~lLrGNHE~~ 131 (354)
+++|+||+|.+ ...+.+ ..|-.+|..++..+.+. |=|..
T Consensus 2 ~ilfiGDi~G~--~Gr~~l~~~L~~lk~~~~~D~vIa--NgEn~ 41 (266)
T TIGR00282 2 KFLFIGDVYGK--AGRKIVKNNLPQLKSKYQADLVIA--NGENT 41 (266)
T ss_pred eEEEEEecCCH--HHHHHHHHHHHHHHHhCCCCEEEE--cCccc
Confidence 58999999954 333333 45666777787665554 44554
No 143
>PF09637 Med18: Med18 protein; InterPro: IPR019095 The Mediator complex is a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. On recruitment the Mediator complex unfolds to an extended conformation and partially surrounds RNA polymerase II, specifically interacting with the unphosphorylated form of the C-terminal domain (CTD) of RNA polymerase II. The Mediator complex dissociates from the RNA polymerase II holoenzyme and stays at the promoter when transcriptional elongation begins. The Mediator complex is composed of at least 31 subunits: MED1, MED4, MED6, MED7, MED8, MED9, MED10, MED11, MED12, MED13, MED13L, MED14, MED15, MED16, MED17, MED18, MED19, MED20, MED21, MED22, MED23, MED24, MED25, MED26, MED27, MED29, MED30, MED31, CCNC, CDK8 and CDC2L6/CDK11. The subunits form at least three structurally distinct submodules. The head and the middle modules interact directly with RNA polymerase II, whereas the elongated tail module interacts with gene-specific regulatory proteins. Mediator containing the CDK8 module is less active than Mediator lacking this module in supporting transcriptional activation. The head module contains: MED6, MED8, MED11, SRB4/MED17, SRB5/MED18, ROX3/MED19, SRB2/MED20 and SRB6/MED22. The middle module contains: MED1, MED4, NUT1/MED5, MED7, CSE2/MED9, NUT2/MED10, SRB7/MED21 and SOH1/MED31. CSE2/MED9 interacts directly with MED4. The tail module contains: MED2, PGD1/MED3, RGR1/MED14, GAL11/MED15 and SIN4/MED16. The CDK8 module contains: MED12, MED13, CCNC and CDK8. Individual preparations of the Mediator complex lacking one or more distinct subunits have been variously termed ARC, CRSP, DRIP, PC2, SMCC and TRAP. Med18 is one subunit of the Mediator complex and a component of the head module that is involved in stimulating basal RNA polymerase II (PolII) transcription. Med18 consists of an eight-stranded beta-barrel with a central pore and three flanking helices. It complexes with Med8 and Med20 proteins by forming a heterodimer of two-fold symmetry with Med20 and binding the C-terminal alpha-helix region of Med8 across the top of its barrel. This complex creates a multipartite TBP-binding site that can be modulated by transcriptional activators []. ; GO: 0001104 RNA polymerase II transcription cofactor activity, 0006357 regulation of transcription from RNA polymerase II promoter, 0016592 mediator complex; PDB: 2HZM_F 2HZS_H 3RJ1_E 3C0T_A.
Probab=21.04 E-value=1.2e+02 Score=28.69 Aligned_cols=38 Identities=24% Similarity=0.495 Sum_probs=30.8
Q ss_pred ChHHHHHHHHhCCCceEEEeeeeecCCeEEecCCeEEEEee
Q 018547 231 GSDVVADFLDKNDLDLICRGHQVVEDGYEFFARRRLVTIFS 271 (354)
Q Consensus 231 G~~~~~~fL~~~~l~~IIRgHq~v~~G~~~~~~~~~iTvfS 271 (354)
....+-+||+.+|... -+|.+.+||.|+.++-.|+||-
T Consensus 139 ~~~~~~~fl~~lGy~~---~~Eyv~~G~~F~~g~i~I~l~r 176 (250)
T PF09637_consen 139 TSGSLLSFLNELGYRF---DYEYVVEGYRFFKGDIVIELFR 176 (250)
T ss_dssp SSSSHHHHHHHTTEEE---EEEEEEEEEEEEECCEEEEEEE
T ss_pred CCCCHHHHHHHcCCce---EEEEEEEEEEEEECCEEEEEEE
Confidence 4567889999999654 6899999999999887777654
Done!