Query 018550
Match_columns 354
No_of_seqs 203 out of 2425
Neff 10.5
Searched_HMMs 29240
Date Mon Mar 25 17:01:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018550.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018550hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xve_A Flavin-containing monoo 100.0 2E-38 6.8E-43 293.3 31.1 306 1-321 1-338 (464)
2 4a9w_A Monooxygenase; baeyer-v 100.0 6.5E-36 2.2E-40 268.3 25.0 264 2-306 3-327 (357)
3 2gv8_A Monooxygenase; FMO, FAD 100.0 2.3E-35 7.7E-40 272.4 28.5 299 2-321 6-359 (447)
4 3gwf_A Cyclohexanone monooxyge 100.0 1.8E-33 6.1E-38 263.9 20.0 202 3-231 9-212 (540)
5 3f8d_A Thioredoxin reductase ( 100.0 1.5E-33 5.1E-38 249.4 17.2 246 2-306 15-290 (323)
6 3lzw_A Ferredoxin--NADP reduct 100.0 7.4E-34 2.5E-38 252.4 15.2 251 3-305 8-287 (332)
7 2zbw_A Thioredoxin reductase; 100.0 3.1E-33 1.1E-37 248.8 18.8 267 2-320 5-313 (335)
8 3fbs_A Oxidoreductase; structu 100.0 2.2E-33 7.7E-38 245.4 17.6 244 1-306 1-268 (297)
9 3uox_A Otemo; baeyer-villiger 100.0 1.2E-32 4E-37 258.6 21.9 203 2-231 9-219 (545)
10 4ap3_A Steroid monooxygenase; 100.0 1.2E-32 4.1E-37 258.8 20.9 203 2-231 21-225 (549)
11 2q7v_A Thioredoxin reductase; 100.0 3.9E-32 1.3E-36 240.7 19.4 248 3-306 9-287 (325)
12 4b1b_A TRXR, thioredoxin reduc 100.0 1.5E-33 5.2E-38 263.0 10.0 309 3-353 43-410 (542)
13 3ab1_A Ferredoxin--NADP reduct 100.0 3E-32 1E-36 244.9 18.0 268 2-320 14-324 (360)
14 4gcm_A TRXR, thioredoxin reduc 100.0 1.9E-32 6.7E-37 241.2 15.8 247 2-307 6-282 (312)
15 3itj_A Thioredoxin reductase 1 100.0 6.8E-33 2.3E-37 246.8 11.8 252 1-306 21-310 (338)
16 4a5l_A Thioredoxin reductase; 100.0 1.4E-32 4.6E-37 242.5 13.6 255 3-309 5-290 (314)
17 3cty_A Thioredoxin reductase; 100.0 5.8E-32 2E-36 239.0 16.9 247 2-307 16-292 (319)
18 2q0l_A TRXR, thioredoxin reduc 100.0 3.8E-32 1.3E-36 239.3 15.4 249 2-307 1-285 (311)
19 1fl2_A Alkyl hydroperoxide red 100.0 8.5E-32 2.9E-36 236.9 13.8 249 2-307 1-281 (310)
20 3oc4_A Oxidoreductase, pyridin 100.0 5.4E-31 1.8E-35 243.4 19.5 263 1-324 1-316 (452)
21 3urh_A Dihydrolipoyl dehydroge 100.0 4.5E-32 1.5E-36 253.2 11.7 289 2-328 25-369 (491)
22 1ojt_A Surface protein; redox- 100.0 5.1E-32 1.7E-36 252.1 12.0 284 2-325 6-352 (482)
23 1trb_A Thioredoxin reductase; 100.0 1E-31 3.4E-36 237.5 13.3 248 2-307 5-290 (320)
24 3r9u_A Thioredoxin reductase; 100.0 2.5E-31 8.5E-36 234.4 15.5 248 2-306 4-287 (315)
25 1w4x_A Phenylacetone monooxyge 100.0 2.4E-30 8.2E-35 243.9 22.7 202 3-231 17-220 (542)
26 3d1c_A Flavin-containing putat 100.0 5.3E-31 1.8E-35 237.5 16.9 266 3-306 5-311 (369)
27 1ebd_A E3BD, dihydrolipoamide 100.0 5.7E-32 1.9E-36 250.2 10.8 288 2-325 3-336 (455)
28 4eqs_A Coenzyme A disulfide re 100.0 5.4E-32 1.8E-36 248.4 10.4 264 4-324 2-313 (437)
29 3ef6_A Toluene 1,2-dioxygenase 100.0 3.4E-32 1.2E-36 248.2 8.5 275 1-339 1-326 (410)
30 2a87_A TRXR, TR, thioredoxin r 100.0 2.5E-31 8.7E-36 236.4 13.5 248 2-307 14-292 (335)
31 4fk1_A Putative thioredoxin re 100.0 2.4E-31 8.2E-36 233.3 12.9 250 3-311 7-280 (304)
32 1zmd_A Dihydrolipoyl dehydroge 100.0 6.7E-32 2.3E-36 251.0 9.2 283 2-323 6-346 (474)
33 1xdi_A RV3303C-LPDA; reductase 100.0 2.5E-31 8.4E-36 248.6 13.0 287 1-322 1-342 (499)
34 2qae_A Lipoamide, dihydrolipoy 100.0 7.2E-32 2.5E-36 250.4 9.1 287 1-325 1-343 (468)
35 1vdc_A NTR, NADPH dependent th 100.0 6.9E-31 2.4E-35 233.5 14.8 248 3-307 9-299 (333)
36 3l8k_A Dihydrolipoyl dehydroge 100.0 6.8E-32 2.3E-36 250.2 8.6 273 3-322 5-333 (466)
37 1hyu_A AHPF, alkyl hydroperoxi 100.0 1.7E-30 5.9E-35 243.5 18.1 250 2-308 212-493 (521)
38 1dxl_A Dihydrolipoamide dehydr 100.0 9.9E-32 3.4E-36 249.8 9.4 290 2-325 6-345 (470)
39 3dgh_A TRXR-1, thioredoxin red 100.0 2E-31 6.7E-36 248.4 11.1 283 2-324 9-354 (483)
40 3dgz_A Thioredoxin reductase 2 100.0 1.5E-31 5.2E-36 249.3 10.4 284 2-324 6-354 (488)
41 1v59_A Dihydrolipoamide dehydr 100.0 1.1E-31 3.9E-36 249.8 9.0 285 2-324 5-352 (478)
42 1onf_A GR, grase, glutathione 100.0 2.9E-31 1E-35 247.9 11.5 261 1-305 1-314 (500)
43 2wpf_A Trypanothione reductase 100.0 1.4E-31 4.9E-36 249.4 9.0 282 3-323 8-356 (495)
44 1mo9_A ORF3; nucleotide bindin 100.0 1.8E-31 6.2E-36 250.5 8.3 281 2-324 43-380 (523)
45 3klj_A NAD(FAD)-dependent dehy 100.0 3.9E-32 1.3E-36 245.0 3.2 263 2-340 9-313 (385)
46 2hqm_A GR, grase, glutathione 100.0 2E-31 6.7E-36 247.9 7.9 285 2-323 11-348 (479)
47 2eq6_A Pyruvate dehydrogenase 100.0 3.1E-31 1.1E-35 245.6 9.0 275 3-325 7-337 (464)
48 2a8x_A Dihydrolipoyl dehydroge 100.0 1.9E-31 6.7E-36 247.2 7.6 281 3-321 4-333 (464)
49 2r9z_A Glutathione amide reduc 100.0 3.2E-31 1.1E-35 245.3 8.3 275 2-323 4-328 (463)
50 3ic9_A Dihydrolipoamide dehydr 100.0 1.3E-31 4.6E-36 249.6 5.4 279 3-323 9-339 (492)
51 1fec_A Trypanothione reductase 100.0 5.3E-31 1.8E-35 245.4 9.3 284 2-323 3-352 (490)
52 3lad_A Dihydrolipoamide dehydr 100.0 1E-30 3.4E-35 243.3 11.0 288 1-327 2-348 (476)
53 2yqu_A 2-oxoglutarate dehydrog 100.0 3.1E-31 1.1E-35 245.3 7.5 278 2-323 1-328 (455)
54 1zk7_A HGII, reductase, mercur 100.0 8.4E-31 2.9E-35 243.2 10.3 281 2-322 4-334 (467)
55 4dna_A Probable glutathione re 100.0 4.8E-31 1.6E-35 244.5 8.6 285 2-324 5-333 (463)
56 3o0h_A Glutathione reductase; 100.0 5.3E-31 1.8E-35 245.4 8.8 285 3-324 27-353 (484)
57 2gqw_A Ferredoxin reductase; f 100.0 2.8E-30 9.4E-35 235.3 12.9 254 2-324 7-310 (408)
58 3s5w_A L-ornithine 5-monooxyge 100.0 3.8E-30 1.3E-34 238.8 13.6 287 3-306 31-420 (463)
59 3lxd_A FAD-dependent pyridine 100.0 1.3E-30 4.6E-35 238.3 10.3 274 2-338 9-337 (415)
60 3ics_A Coenzyme A-disulfide re 100.0 2.7E-30 9.1E-35 246.4 12.4 264 2-321 36-352 (588)
61 3dk9_A Grase, GR, glutathione 100.0 8.6E-31 2.9E-35 243.8 8.5 276 2-322 20-356 (478)
62 3iwa_A FAD-dependent pyridine 100.0 2.4E-30 8.2E-35 240.4 11.4 273 2-325 3-332 (472)
63 1lvl_A Dihydrolipoamide dehydr 100.0 1.1E-30 3.7E-35 241.6 8.7 278 2-325 5-333 (458)
64 3qfa_A Thioredoxin reductase 1 100.0 1.8E-30 6.1E-35 243.4 10.2 284 2-324 32-382 (519)
65 1ges_A Glutathione reductase; 100.0 4E-31 1.4E-35 243.9 5.5 275 2-323 4-329 (450)
66 1xhc_A NADH oxidase /nitrite r 100.0 2.9E-31 9.8E-36 238.2 4.4 251 3-323 9-298 (367)
67 2bc0_A NADH oxidase; flavoprot 100.0 4.2E-30 1.5E-34 239.6 11.9 263 2-323 35-362 (490)
68 3ntd_A FAD-dependent pyridine 100.0 3.1E-30 1.1E-34 245.2 10.3 267 2-325 1-341 (565)
69 3fg2_P Putative rubredoxin red 100.0 1.9E-30 6.4E-35 236.4 8.3 273 2-338 1-326 (404)
70 3kd9_A Coenzyme A disulfide re 100.0 1.1E-29 3.7E-34 234.5 12.6 260 2-324 3-317 (449)
71 1q1r_A Putidaredoxin reductase 100.0 3.1E-30 1.1E-34 236.6 7.0 262 1-324 3-321 (431)
72 2cdu_A NADPH oxidase; flavoenz 100.0 3.6E-29 1.2E-33 231.3 13.8 264 3-323 1-318 (452)
73 2v3a_A Rubredoxin reductase; a 100.0 6.1E-29 2.1E-33 225.0 12.1 261 2-327 4-311 (384)
74 1nhp_A NADH peroxidase; oxidor 100.0 1.1E-28 3.6E-33 227.8 13.6 260 3-322 1-316 (447)
75 4b63_A L-ornithine N5 monooxyg 100.0 4.3E-28 1.5E-32 226.0 17.3 211 3-230 40-281 (501)
76 3cgb_A Pyridine nucleotide-dis 100.0 1.3E-28 4.5E-33 229.0 10.9 263 2-323 36-354 (480)
77 2x8g_A Thioredoxin glutathione 100.0 1.1E-28 3.6E-33 235.7 9.9 284 2-323 107-460 (598)
78 1ps9_A 2,4-dienoyl-COA reducta 99.9 3.3E-28 1.1E-32 234.8 11.3 228 2-308 373-653 (671)
79 3k30_A Histamine dehydrogenase 99.9 2.8E-28 9.5E-33 235.9 8.6 245 2-322 391-673 (690)
80 1o94_A Tmadh, trimethylamine d 99.9 2.7E-27 9.2E-32 229.9 9.7 249 2-322 389-698 (729)
81 1m6i_A Programmed cell death p 99.9 9.9E-29 3.4E-33 230.2 -0.9 289 2-328 11-358 (493)
82 2vdc_G Glutamate synthase [NAD 99.9 1.6E-27 5.4E-32 219.0 7.0 232 2-306 122-420 (456)
83 2gag_A Heterotetrameric sarcos 99.9 4.1E-26 1.4E-30 227.3 13.8 261 3-320 129-440 (965)
84 4g6h_A Rotenone-insensitive NA 99.9 1.7E-27 5.7E-32 221.7 3.4 220 2-280 42-332 (502)
85 3h8l_A NADH oxidase; membrane 99.9 1.6E-26 5.4E-31 211.0 4.6 255 2-321 1-333 (409)
86 1lqt_A FPRA; NADP+ derivative, 99.9 7.5E-26 2.6E-30 208.2 7.4 235 2-306 3-362 (456)
87 3sx6_A Sulfide-quinone reducta 99.9 8E-26 2.7E-30 207.9 6.6 243 2-306 4-308 (437)
88 1cjc_A Protein (adrenodoxin re 99.9 4.8E-25 1.6E-29 203.1 6.7 160 2-231 6-200 (460)
89 1y56_A Hypothetical protein PH 99.9 8.4E-24 2.9E-28 196.9 9.5 236 3-321 109-374 (493)
90 1gte_A Dihydropyrimidine dehyd 99.9 4.3E-24 1.5E-28 214.2 7.3 250 2-320 187-504 (1025)
91 3h28_A Sulfide-quinone reducta 99.9 7.8E-24 2.7E-28 194.3 1.6 240 1-306 1-297 (430)
92 3vrd_B FCCB subunit, flavocyto 99.9 9.5E-22 3.3E-26 178.9 14.2 253 2-320 2-320 (401)
93 3hyw_A Sulfide-quinone reducta 99.9 5.4E-24 1.8E-28 195.2 -0.7 217 1-280 1-256 (430)
94 2gqf_A Hypothetical protein HI 99.6 2E-16 6.8E-21 143.1 4.7 154 3-169 5-171 (401)
95 3fpz_A Thiazole biosynthetic e 99.6 3.5E-17 1.2E-21 144.4 -5.6 217 3-306 66-294 (326)
96 3v76_A Flavoprotein; structura 99.5 4.2E-14 1.4E-18 128.3 6.5 156 2-170 27-191 (417)
97 3oz2_A Digeranylgeranylglycero 99.4 9.5E-13 3.2E-17 119.0 11.6 155 3-167 5-163 (397)
98 2ywl_A Thioredoxin reductase r 99.4 1.7E-12 5.9E-17 104.1 10.5 112 2-170 1-112 (180)
99 3ces_A MNMG, tRNA uridine 5-ca 99.4 1.6E-12 5.4E-17 122.3 10.4 184 2-228 28-221 (651)
100 2i0z_A NAD(FAD)-utilizing dehy 99.4 1.5E-12 5.3E-17 119.6 9.6 156 1-168 25-193 (447)
101 2qa1_A PGAE, polyketide oxygen 99.4 1.8E-12 6.1E-17 120.7 9.8 153 2-169 11-168 (500)
102 2qa2_A CABE, polyketide oxygen 99.3 6.4E-12 2.2E-16 116.9 12.9 156 2-169 12-169 (499)
103 3cgv_A Geranylgeranyl reductas 99.3 2.1E-12 7.3E-17 116.9 9.3 155 2-166 4-162 (397)
104 2cul_A Glucose-inhibited divis 99.3 8.3E-12 2.8E-16 104.3 10.7 125 2-170 3-129 (232)
105 3ihg_A RDME; flavoenzyme, anth 99.3 2.3E-11 7.8E-16 114.5 14.9 155 2-168 5-185 (535)
106 3nix_A Flavoprotein/dehydrogen 99.3 2.4E-12 8.2E-17 117.5 7.7 151 3-166 6-166 (421)
107 2bry_A NEDD9 interacting prote 99.3 8E-12 2.7E-16 116.2 11.0 139 2-169 92-233 (497)
108 3fmw_A Oxygenase; mithramycin, 99.3 5.1E-12 1.7E-16 119.3 9.8 156 2-169 49-210 (570)
109 3qj4_A Renalase; FAD/NAD(P)-bi 99.3 5.6E-12 1.9E-16 111.8 9.2 154 2-164 1-163 (342)
110 3nlc_A Uncharacterized protein 99.3 7.3E-12 2.5E-16 116.8 9.8 156 2-166 107-277 (549)
111 1yvv_A Amine oxidase, flavin-c 99.3 3E-11 1E-15 106.7 13.4 156 1-170 1-166 (336)
112 3rp8_A Flavoprotein monooxygen 99.3 8.3E-12 2.8E-16 113.5 8.3 148 2-170 23-185 (407)
113 2vou_A 2,6-dihydroxypyridine h 99.3 1.4E-11 4.9E-16 111.5 9.7 145 2-169 5-156 (397)
114 2zxi_A TRNA uridine 5-carboxym 99.2 1.5E-11 5.2E-16 115.3 9.0 185 2-229 27-221 (637)
115 1k0i_A P-hydroxybenzoate hydro 99.2 5.3E-11 1.8E-15 107.6 12.2 152 1-170 1-167 (394)
116 3e1t_A Halogenase; flavoprotei 99.2 2.3E-11 7.7E-16 113.8 9.8 155 3-170 8-176 (512)
117 2uzz_A N-methyl-L-tryptophan o 99.2 4E-11 1.4E-15 107.5 10.8 61 103-171 149-209 (372)
118 3dme_A Conserved exported prot 99.2 3.2E-11 1.1E-15 107.9 10.0 64 101-168 148-211 (369)
119 3alj_A 2-methyl-3-hydroxypyrid 99.2 7.3E-11 2.5E-15 106.1 12.2 146 3-168 12-162 (379)
120 2x3n_A Probable FAD-dependent 99.2 4.2E-11 1.4E-15 108.5 10.2 148 3-168 7-168 (399)
121 2xdo_A TETX2 protein; tetracyc 99.2 7.1E-11 2.4E-15 107.0 10.9 148 2-170 26-186 (398)
122 3atr_A Conserved archaeal prot 99.2 1.5E-11 5.1E-16 113.3 6.4 152 2-169 6-165 (453)
123 2gmh_A Electron transfer flavo 99.2 1.7E-10 5.9E-15 109.3 13.8 158 2-167 35-218 (584)
124 1y0p_A Fumarate reductase flav 99.2 1.1E-10 3.9E-15 110.5 12.0 164 2-167 126-318 (571)
125 1qo8_A Flavocytochrome C3 fuma 99.2 5.9E-11 2E-15 112.3 9.6 163 3-167 122-313 (566)
126 3i3l_A Alkylhalidase CMLS; fla 99.2 2.2E-10 7.4E-15 108.4 13.4 153 2-166 23-188 (591)
127 2ywl_A Thioredoxin reductase r 99.2 9.5E-12 3.2E-16 99.7 3.5 107 199-307 3-147 (180)
128 1rp0_A ARA6, thiazole biosynth 99.2 2.8E-10 9.6E-15 98.0 12.8 139 2-165 39-190 (284)
129 3cp8_A TRNA uridine 5-carboxym 99.2 7.8E-11 2.7E-15 110.8 9.4 184 2-228 21-215 (641)
130 3ps9_A TRNA 5-methylaminomethy 99.2 1.2E-10 4E-15 112.7 10.9 60 101-167 415-474 (676)
131 4hb9_A Similarities with proba 99.2 2.3E-10 7.7E-15 103.9 12.1 45 122-170 126-170 (412)
132 3c96_A Flavin-containing monoo 99.2 4.3E-10 1.5E-14 102.2 13.9 154 2-170 4-173 (410)
133 1ryi_A Glycine oxidase; flavop 99.1 1.6E-10 5.6E-15 103.9 10.4 60 100-167 161-220 (382)
134 2gf3_A MSOX, monomeric sarcosi 99.1 1.6E-10 5.5E-15 104.2 10.2 58 102-167 149-206 (389)
135 1y56_B Sarcosine oxidase; dehy 99.1 3.4E-10 1.2E-14 101.8 11.4 58 101-166 147-205 (382)
136 3dje_A Fructosyl amine: oxygen 99.1 2.9E-10 1E-14 104.2 10.8 62 102-170 160-225 (438)
137 2r0c_A REBC; flavin adenine di 99.1 8.2E-10 2.8E-14 104.0 14.0 159 3-169 27-199 (549)
138 3nyc_A D-arginine dehydrogenas 99.1 1.6E-10 5.4E-15 103.9 8.8 59 101-167 152-210 (381)
139 2e5v_A L-aspartate oxidase; ar 99.1 1.2E-10 4.2E-15 107.5 8.1 214 4-230 1-242 (472)
140 4at0_A 3-ketosteroid-delta4-5a 99.1 5.3E-10 1.8E-14 104.5 11.4 60 104-166 203-264 (510)
141 3pvc_A TRNA 5-methylaminomethy 99.1 6.2E-10 2.1E-14 107.8 11.2 60 102-167 411-470 (689)
142 2oln_A NIKD protein; flavoprot 99.1 5.4E-10 1.9E-14 101.1 10.0 56 103-166 153-208 (397)
143 3jsk_A Cypbp37 protein; octame 99.1 1.9E-10 6.6E-15 100.2 6.6 40 2-41 79-120 (344)
144 1d4d_A Flavocytochrome C fumar 99.1 3E-09 1E-13 100.6 15.3 163 3-167 127-318 (572)
145 3da1_A Glycerol-3-phosphate de 99.0 9E-10 3.1E-14 103.8 11.6 64 101-166 168-232 (561)
146 2dkh_A 3-hydroxybenzoate hydro 99.0 4.5E-10 1.5E-14 107.7 9.1 155 3-169 33-214 (639)
147 2qcu_A Aerobic glycerol-3-phos 99.0 1.3E-09 4.6E-14 101.5 11.8 64 101-167 147-211 (501)
148 2yqu_A 2-oxoglutarate dehydrog 99.0 2.4E-09 8.1E-14 98.6 13.1 101 2-171 167-267 (455)
149 3k7m_X 6-hydroxy-L-nicotine ox 99.0 5.2E-10 1.8E-14 102.3 8.6 42 2-43 1-42 (431)
150 2gag_B Heterotetrameric sarcos 99.0 2.2E-09 7.4E-14 97.3 12.0 59 101-166 172-230 (405)
151 1pn0_A Phenol 2-monooxygenase; 99.0 2E-09 6.7E-14 103.5 12.1 163 2-169 8-233 (665)
152 2wdq_A Succinate dehydrogenase 99.0 2.2E-09 7.7E-14 101.6 12.3 64 103-168 143-208 (588)
153 2h88_A Succinate dehydrogenase 99.0 3.7E-09 1.3E-13 100.4 12.0 64 103-168 155-219 (621)
154 2v3a_A Rubredoxin reductase; a 99.0 4E-09 1.4E-13 94.9 11.8 101 2-170 145-245 (384)
155 2eq6_A Pyruvate dehydrogenase 98.9 9.5E-09 3.3E-13 94.8 14.0 106 2-172 169-275 (464)
156 3kkj_A Amine oxidase, flavin-c 98.9 5.4E-10 1.9E-14 95.8 5.3 43 1-43 1-43 (336)
157 3c4n_A Uncharacterized protein 98.9 4.6E-10 1.6E-14 101.8 4.7 57 102-166 171-236 (405)
158 1ges_A Glutathione reductase; 98.9 8.7E-09 3E-13 94.7 12.6 102 2-171 167-268 (450)
159 2rgh_A Alpha-glycerophosphate 98.9 6.9E-09 2.4E-13 98.0 11.8 64 102-167 187-251 (571)
160 2weu_A Tryptophan 5-halogenase 98.9 2.9E-09 1E-13 99.5 9.1 61 100-168 170-232 (511)
161 1ebd_A E3BD, dihydrolipoamide 98.9 1.6E-08 5.5E-13 93.1 13.7 104 2-171 170-273 (455)
162 2aqj_A Tryptophan halogenase, 98.9 5.9E-09 2E-13 98.1 10.9 62 100-168 162-224 (538)
163 3c4a_A Probable tryptophan hyd 98.9 5.1E-10 1.7E-14 100.7 3.4 136 3-167 1-144 (381)
164 1nhp_A NADH peroxidase; oxidor 98.9 8.9E-09 3E-13 94.6 11.7 103 2-173 149-251 (447)
165 1kf6_A Fumarate reductase flav 98.9 8.5E-09 2.9E-13 97.9 11.8 65 103-169 134-200 (602)
166 2bs2_A Quinol-fumarate reducta 98.9 1.1E-08 3.6E-13 97.9 12.2 63 103-167 158-221 (660)
167 1v59_A Dihydrolipoamide dehydr 98.9 2.1E-08 7.2E-13 92.9 13.6 106 2-171 183-290 (478)
168 2gjc_A Thiazole biosynthetic e 98.9 8.9E-09 3.1E-13 89.3 9.9 38 3-40 66-105 (326)
169 3ic9_A Dihydrolipoamide dehydr 98.9 6.4E-08 2.2E-12 89.9 16.4 105 2-172 174-278 (492)
170 2e4g_A Tryptophan halogenase; 98.9 7.4E-09 2.5E-13 97.6 10.1 61 100-168 191-254 (550)
171 1pj5_A N,N-dimethylglycine oxi 98.9 6.7E-09 2.3E-13 102.7 10.2 58 101-166 149-207 (830)
172 1onf_A GR, grase, glutathione 98.8 2.7E-08 9.3E-13 92.6 13.2 100 3-170 177-277 (500)
173 3urh_A Dihydrolipoyl dehydroge 98.8 5.1E-08 1.7E-12 90.6 14.7 105 2-171 198-303 (491)
174 3ef6_A Toluene 1,2-dioxygenase 98.8 1.2E-08 4.2E-13 92.5 10.3 101 2-170 143-243 (410)
175 2pyx_A Tryptophan halogenase; 98.8 8.9E-09 3.1E-13 96.5 9.6 62 100-168 172-235 (526)
176 3i6d_A Protoporphyrinogen oxid 98.8 3.9E-09 1.3E-13 97.5 7.0 41 2-42 5-51 (470)
177 2r9z_A Glutathione amide reduc 98.8 2.4E-08 8.3E-13 92.0 12.2 102 2-171 166-267 (463)
178 3lxd_A FAD-dependent pyridine 98.8 3E-08 1E-12 90.1 12.6 101 2-170 152-253 (415)
179 2qae_A Lipoamide, dihydrolipoy 98.8 5E-08 1.7E-12 90.1 14.0 105 2-171 174-279 (468)
180 1chu_A Protein (L-aspartate ox 98.8 4E-09 1.4E-13 98.9 6.6 38 3-41 9-46 (540)
181 3fg2_P Putative rubredoxin red 98.8 2.5E-08 8.7E-13 90.3 11.5 102 2-170 142-243 (404)
182 3oc4_A Oxidoreductase, pyridin 98.8 4.7E-08 1.6E-12 89.9 13.3 103 2-173 147-249 (452)
183 1fec_A Trypanothione reductase 98.8 3.4E-08 1.2E-12 91.7 12.1 102 2-171 187-291 (490)
184 2cul_A Glucose-inhibited divis 98.8 2.3E-09 7.9E-14 89.4 3.8 81 198-279 4-124 (232)
185 2a8x_A Dihydrolipoyl dehydroge 98.8 5E-08 1.7E-12 90.0 13.1 103 2-171 171-274 (464)
186 2gqw_A Ferredoxin reductase; f 98.8 3.3E-08 1.1E-12 89.6 11.7 97 2-170 145-241 (408)
187 3lad_A Dihydrolipoamide dehydr 98.8 5.9E-08 2E-12 89.8 13.5 104 2-171 180-283 (476)
188 1lvl_A Dihydrolipoamide dehydr 98.8 1.8E-08 6.1E-13 92.8 9.8 102 2-172 171-272 (458)
189 2hqm_A GR, grase, glutathione 98.8 3.5E-08 1.2E-12 91.4 11.8 102 2-170 185-287 (479)
190 2wpf_A Trypanothione reductase 98.8 4.1E-08 1.4E-12 91.2 12.3 101 2-170 191-294 (495)
191 1dxl_A Dihydrolipoamide dehydr 98.8 4E-08 1.4E-12 90.8 12.1 105 2-171 177-282 (470)
192 1ojt_A Surface protein; redox- 98.8 2.1E-08 7.1E-13 93.0 10.1 101 2-171 185-289 (482)
193 1zmd_A Dihydrolipoyl dehydroge 98.8 4.4E-08 1.5E-12 90.7 12.2 106 2-171 178-285 (474)
194 1q1r_A Putidaredoxin reductase 98.8 3.9E-08 1.3E-12 89.7 11.6 100 2-169 149-251 (431)
195 3axb_A Putative oxidoreductase 98.8 8.3E-09 2.8E-13 94.8 6.7 59 101-167 179-255 (448)
196 3iwa_A FAD-dependent pyridine 98.8 5.7E-08 2E-12 89.8 12.3 100 2-169 159-259 (472)
197 1xdi_A RV3303C-LPDA; reductase 98.8 7.2E-08 2.5E-12 89.8 13.0 101 2-171 182-282 (499)
198 3cgb_A Pyridine nucleotide-dis 98.8 6.1E-08 2.1E-12 89.8 12.2 99 2-170 186-284 (480)
199 1zk7_A HGII, reductase, mercur 98.8 6.3E-08 2.1E-12 89.4 12.2 98 2-170 176-273 (467)
200 2cdu_A NADPH oxidase; flavoenz 98.7 6.2E-08 2.1E-12 89.1 11.9 102 2-171 149-250 (452)
201 4b1b_A TRXR, thioredoxin reduc 98.7 7.9E-08 2.7E-12 89.8 12.7 100 2-171 223-322 (542)
202 3o0h_A Glutathione reductase; 98.7 8.9E-08 3E-12 88.8 12.6 101 2-171 191-291 (484)
203 2bc0_A NADH oxidase; flavoprot 98.7 5.8E-08 2E-12 90.2 11.1 101 2-171 194-294 (490)
204 1mo9_A ORF3; nucleotide bindin 98.7 1.1E-07 3.9E-12 88.9 12.6 101 3-170 215-318 (523)
205 3dgh_A TRXR-1, thioredoxin red 98.7 2.7E-07 9.4E-12 85.5 14.9 104 2-170 187-291 (483)
206 1jnr_A Adenylylsulfate reducta 98.7 5.4E-08 1.9E-12 93.2 10.3 67 103-171 151-223 (643)
207 3s5w_A L-ornithine 5-monooxyge 98.7 1.1E-07 3.9E-12 87.6 12.0 85 116-205 329-417 (463)
208 3dk9_A Grase, GR, glutathione 98.7 2.3E-07 7.7E-12 86.0 13.9 106 2-171 187-296 (478)
209 3ntd_A FAD-dependent pyridine 98.7 1.4E-07 4.6E-12 89.4 12.6 100 3-170 152-269 (565)
210 1m6i_A Programmed cell death p 98.7 1.1E-07 3.7E-12 88.4 11.3 101 2-170 180-284 (493)
211 3gyx_A Adenylylsulfate reducta 98.7 2.1E-08 7.2E-13 95.9 6.2 66 103-170 166-237 (662)
212 4eqs_A Coenzyme A disulfide re 98.7 1.5E-07 5.3E-12 85.9 11.8 96 2-170 147-242 (437)
213 3dgz_A Thioredoxin reductase 2 98.6 5.8E-07 2E-11 83.4 15.2 105 2-171 185-290 (488)
214 4dna_A Probable glutathione re 98.6 2.4E-07 8.4E-12 85.3 11.9 101 2-171 170-271 (463)
215 1xhc_A NADH oxidase /nitrite r 98.6 1.6E-07 5.6E-12 83.7 9.5 93 3-170 144-236 (367)
216 1trb_A Thioredoxin reductase; 98.6 4.6E-07 1.6E-11 79.1 11.3 104 2-171 145-250 (320)
217 4dgk_A Phytoene dehydrogenase; 98.5 3.6E-08 1.2E-12 91.9 4.3 56 104-166 222-278 (501)
218 3g3e_A D-amino-acid oxidase; F 98.5 1.5E-08 5.2E-13 89.9 1.5 34 3-36 1-40 (351)
219 3l8k_A Dihydrolipoyl dehydroge 98.5 4.4E-07 1.5E-11 83.7 11.4 104 2-171 172-275 (466)
220 3qfa_A Thioredoxin reductase 1 98.5 1.2E-06 4.1E-11 81.8 14.3 105 2-171 210-318 (519)
221 4g6h_A Rotenone-insensitive NA 98.5 2E-07 6.7E-12 86.6 8.6 96 4-164 219-330 (502)
222 3klj_A NAD(FAD)-dependent dehy 98.5 8.2E-08 2.8E-12 86.2 5.7 88 198-285 10-121 (385)
223 3vrd_B FCCB subunit, flavocyto 98.5 1.2E-07 4.1E-12 85.7 6.8 90 197-286 2-114 (401)
224 3ics_A Coenzyme A-disulfide re 98.5 4E-07 1.4E-11 86.5 10.7 98 2-170 187-284 (588)
225 4gut_A Lysine-specific histone 98.5 2.1E-07 7.1E-12 90.5 8.6 39 2-40 336-374 (776)
226 3hyw_A Sulfide-quinone reducta 98.5 1.7E-07 5.9E-12 85.5 7.6 83 198-280 3-109 (430)
227 3sx6_A Sulfide-quinone reducta 98.5 2.3E-07 8E-12 84.8 8.3 86 198-284 5-116 (437)
228 2zbw_A Thioredoxin reductase; 98.5 8.7E-07 3E-11 77.9 11.8 102 2-170 152-254 (335)
229 4gde_A UDP-galactopyranose mut 98.5 5.9E-08 2E-12 90.7 4.2 41 2-42 10-51 (513)
230 2x8g_A Thioredoxin glutathione 98.5 2.4E-06 8.1E-11 81.4 14.7 103 3-170 287-397 (598)
231 3kd9_A Coenzyme A disulfide re 98.5 5.2E-07 1.8E-11 82.8 9.8 98 3-170 149-246 (449)
232 3d1c_A Flavin-containing putat 98.4 8.1E-07 2.8E-11 79.2 10.0 107 3-170 167-274 (369)
233 3pl8_A Pyranose 2-oxidase; sub 98.4 2.4E-06 8.3E-11 81.3 13.1 40 2-41 46-85 (623)
234 3ab1_A Ferredoxin--NADP reduct 98.4 1.6E-06 5.5E-11 77.0 11.1 102 2-170 163-265 (360)
235 3nks_A Protoporphyrinogen oxid 98.4 1.6E-07 5.4E-12 87.0 4.7 43 1-43 1-45 (477)
236 3fbs_A Oxidoreductase; structu 98.4 3.3E-07 1.1E-11 79.0 6.2 87 198-284 3-116 (297)
237 3itj_A Thioredoxin reductase 1 98.4 1.3E-06 4.4E-11 76.7 10.0 99 2-170 173-273 (338)
238 2q7v_A Thioredoxin reductase; 98.4 1.1E-06 3.8E-11 76.9 9.2 100 2-171 152-252 (325)
239 3h8l_A NADH oxidase; membrane 98.4 3.4E-07 1.2E-11 83.0 6.1 86 198-284 2-117 (409)
240 1fl2_A Alkyl hydroperoxide red 98.4 2.9E-06 9.9E-11 73.6 11.5 98 2-170 144-244 (310)
241 2q0l_A TRXR, thioredoxin reduc 98.4 1.4E-06 4.9E-11 75.6 9.4 101 2-171 143-244 (311)
242 3nrn_A Uncharacterized protein 98.4 3E-07 1E-11 83.7 5.1 41 3-43 1-41 (421)
243 3h28_A Sulfide-quinone reducta 98.3 7.7E-07 2.6E-11 81.2 7.7 85 198-283 3-112 (430)
244 2e1m_A L-glutamate oxidase; L- 98.3 3.6E-07 1.2E-11 81.2 5.2 42 2-43 44-86 (376)
245 3f8d_A Thioredoxin reductase ( 98.3 2.2E-06 7.4E-11 74.8 10.2 98 2-169 154-252 (323)
246 3r9u_A Thioredoxin reductase; 98.3 1.2E-06 4.2E-11 76.1 8.5 101 2-171 147-247 (315)
247 2b9w_A Putative aminooxidase; 98.3 4.1E-07 1.4E-11 82.8 5.5 41 2-42 6-47 (424)
248 1vdc_A NTR, NADPH dependent th 98.3 1.9E-06 6.6E-11 75.6 9.5 101 2-171 159-262 (333)
249 2bcg_G Secretory pathway GDP d 98.3 4.2E-07 1.4E-11 83.5 5.4 42 2-43 11-52 (453)
250 3ka7_A Oxidoreductase; structu 98.3 3.6E-07 1.2E-11 83.2 4.9 40 3-42 1-40 (425)
251 1rsg_A FMS1 protein; FAD bindi 98.3 2.9E-07 1E-11 86.0 4.1 40 3-42 9-49 (516)
252 4fk1_A Putative thioredoxin re 98.3 7.3E-07 2.5E-11 77.3 6.3 87 199-285 8-122 (304)
253 3cty_A Thioredoxin reductase; 98.3 5.9E-06 2E-10 72.0 12.1 97 3-170 156-254 (319)
254 1s3e_A Amine oxidase [flavin-c 98.3 4.8E-07 1.6E-11 84.7 5.1 42 2-43 4-45 (520)
255 3hdq_A UDP-galactopyranose mut 98.3 5.8E-07 2E-11 80.5 5.3 42 2-43 29-70 (397)
256 1v0j_A UDP-galactopyranose mut 98.3 6.3E-07 2.1E-11 80.9 5.2 42 2-43 7-49 (399)
257 2a87_A TRXR, TR, thioredoxin r 98.3 1.4E-06 4.8E-11 76.6 7.1 101 2-172 155-256 (335)
258 2jae_A L-amino acid oxidase; o 98.2 8.4E-07 2.9E-11 82.4 5.4 40 2-41 11-50 (489)
259 3lzw_A Ferredoxin--NADP reduct 98.2 6E-06 2E-10 72.2 10.3 99 2-171 154-253 (332)
260 2yg5_A Putrescine oxidase; oxi 98.2 7.5E-07 2.6E-11 81.8 4.3 40 3-42 6-45 (453)
261 3ihm_A Styrene monooxygenase A 98.2 9.4E-07 3.2E-11 80.6 4.5 35 1-35 21-55 (430)
262 2ivd_A PPO, PPOX, protoporphyr 98.2 9.6E-07 3.3E-11 81.7 4.6 40 2-41 16-55 (478)
263 1i8t_A UDP-galactopyranose mut 98.2 1E-06 3.4E-11 78.6 4.6 42 2-43 1-42 (367)
264 4a5l_A Thioredoxin reductase; 98.2 1E-05 3.5E-10 70.2 10.8 34 2-35 152-185 (314)
265 2bi7_A UDP-galactopyranose mut 98.2 1.4E-06 5E-11 78.0 5.4 42 2-43 3-44 (384)
266 3k30_A Histamine dehydrogenase 98.2 1.1E-05 3.9E-10 77.9 12.0 100 3-169 524-625 (690)
267 1sez_A Protoporphyrinogen oxid 98.2 1.3E-06 4.6E-11 81.3 5.1 40 2-41 13-52 (504)
268 3lov_A Protoporphyrinogen oxid 98.1 1.5E-06 5.2E-11 80.3 4.9 41 2-42 4-46 (475)
269 2vvm_A Monoamine oxidase N; FA 98.1 1.4E-06 4.7E-11 81.0 4.6 40 3-42 40-79 (495)
270 4dsg_A UDP-galactopyranose mut 98.1 2.1E-06 7.1E-11 79.5 5.7 42 2-43 9-51 (484)
271 1hyu_A AHPF, alkyl hydroperoxi 98.1 1.9E-05 6.6E-10 73.7 11.2 98 2-170 355-455 (521)
272 2iid_A L-amino-acid oxidase; f 98.1 2.4E-06 8.2E-11 79.5 4.9 41 2-42 33-73 (498)
273 4gcm_A TRXR, thioredoxin reduc 98.1 3E-06 1E-10 73.7 4.7 87 199-285 8-121 (312)
274 1d5t_A Guanine nucleotide diss 98.0 4.1E-06 1.4E-10 76.4 5.2 42 2-43 6-47 (433)
275 3qvp_A Glucose oxidase; oxidor 98.0 6.1E-06 2.1E-10 77.6 6.5 72 104-177 228-304 (583)
276 1c0p_A D-amino acid oxidase; a 98.0 5.8E-06 2E-10 73.5 5.8 34 2-35 6-39 (363)
277 4a9w_A Monooxygenase; baeyer-v 98.0 4E-06 1.4E-10 74.1 4.2 80 198-278 4-130 (357)
278 3p1w_A Rabgdi protein; GDI RAB 98.0 5.8E-06 2E-10 75.6 4.9 40 3-42 21-60 (475)
279 4ap3_A Steroid monooxygenase; 97.9 9E-06 3.1E-10 76.3 5.9 88 198-285 22-166 (549)
280 2z3y_A Lysine-specific histone 97.9 7.2E-06 2.5E-10 78.8 5.3 40 2-41 107-146 (662)
281 3gwf_A Cyclohexanone monooxyge 97.9 1.5E-05 5.1E-10 74.6 7.3 88 198-285 9-154 (540)
282 3g5s_A Methylenetetrahydrofola 97.9 1E-05 3.4E-10 71.3 5.5 36 2-37 1-36 (443)
283 2xag_A Lysine-specific histone 97.9 8.6E-06 2.9E-10 79.9 5.5 40 2-41 278-317 (852)
284 1b37_A Protein (polyamine oxid 97.9 7.6E-06 2.6E-10 75.5 4.9 41 2-42 4-45 (472)
285 1o94_A Tmadh, trimethylamine d 97.9 2.7E-05 9.3E-10 75.7 8.7 101 3-170 529-648 (729)
286 2gv8_A Monooxygenase; FMO, FAD 97.9 4.7E-05 1.6E-09 69.7 9.7 34 197-230 6-41 (447)
287 3alj_A 2-methyl-3-hydroxypyrid 97.9 1.6E-05 5.3E-10 71.2 6.1 84 197-280 11-160 (379)
288 3uox_A Otemo; baeyer-villiger 97.9 9.9E-06 3.4E-10 76.0 4.9 88 198-285 10-154 (545)
289 3rp8_A Flavoprotein monooxygen 97.9 1.9E-05 6.4E-10 71.4 6.5 83 196-279 22-180 (407)
290 2gag_A Heterotetrameric sarcos 97.8 5.7E-05 1.9E-09 75.7 10.1 95 3-170 285-385 (965)
291 3v76_A Flavoprotein; structura 97.8 6.9E-06 2.4E-10 74.3 2.8 33 198-230 28-60 (417)
292 1ps9_A 2,4-dienoyl-COA reducta 97.8 4.7E-05 1.6E-09 73.4 8.7 54 106-169 576-629 (671)
293 1lqt_A FPRA; NADP+ derivative, 97.8 7.3E-05 2.5E-09 68.5 9.3 35 2-36 147-202 (456)
294 1rp0_A ARA6, thiazole biosynth 97.8 2.4E-05 8.2E-10 67.0 5.3 83 198-280 40-191 (284)
295 2vdc_G Glutamate synthase [NAD 97.8 5.6E-05 1.9E-09 69.2 8.0 33 3-35 265-298 (456)
296 1cjc_A Protein (adrenodoxin re 97.8 0.00017 5.8E-09 66.1 11.2 33 3-35 146-199 (460)
297 1yvv_A Amine oxidase, flavin-c 97.8 2.6E-05 9E-10 68.3 5.6 33 198-230 3-35 (336)
298 2xve_A Flavin-containing monoo 97.7 0.00013 4.3E-09 67.1 10.1 34 2-35 197-230 (464)
299 2bry_A NEDD9 interacting prote 97.7 2.2E-05 7.5E-10 72.8 5.0 85 196-280 91-230 (497)
300 2vou_A 2,6-dihydroxypyridine h 97.7 6.3E-05 2.2E-09 67.7 7.7 83 197-279 5-152 (397)
301 3nlc_A Uncharacterized protein 97.7 2.3E-05 7.7E-10 73.2 4.8 83 197-279 107-276 (549)
302 4hb9_A Similarities with proba 97.7 4E-05 1.4E-09 69.1 6.3 33 198-230 2-34 (412)
303 2x3n_A Probable FAD-dependent 97.7 3.4E-05 1.2E-09 69.4 5.7 82 198-279 7-165 (399)
304 1w4x_A Phenylacetone monooxyge 97.6 6.5E-05 2.2E-09 70.5 6.2 81 198-278 17-152 (542)
305 1gte_A Dihydropyrimidine dehyd 97.6 0.00038 1.3E-08 70.2 11.9 33 3-35 333-366 (1025)
306 2xdo_A TETX2 protein; tetracyc 97.6 0.00019 6.4E-09 64.6 8.6 84 197-280 26-182 (398)
307 3nix_A Flavoprotein/dehydrogen 97.6 2.8E-05 9.6E-10 70.5 2.7 33 198-230 6-38 (421)
308 3ayj_A Pro-enzyme of L-phenyla 97.6 3.4E-05 1.2E-09 73.8 3.3 35 3-37 57-100 (721)
309 3qj4_A Renalase; FAD/NAD(P)-bi 97.4 8.7E-05 3E-09 65.3 4.3 33 198-230 2-37 (342)
310 1kdg_A CDH, cellobiose dehydro 97.4 0.00011 3.9E-09 68.9 5.0 35 2-36 7-41 (546)
311 2i0z_A NAD(FAD)-utilizing dehy 97.3 0.0001 3.5E-09 67.4 3.7 33 198-230 27-59 (447)
312 3t37_A Probable dehydrogenase; 97.3 0.00011 3.9E-09 68.6 3.9 35 2-36 17-52 (526)
313 3i3l_A Alkylhalidase CMLS; fla 97.3 0.00017 5.7E-09 68.2 4.8 34 197-230 23-56 (591)
314 2gqf_A Hypothetical protein HI 97.3 0.00012 4E-09 65.9 3.4 33 198-230 5-37 (401)
315 1k0i_A P-hydroxybenzoate hydro 97.3 0.00014 4.7E-09 65.3 3.6 33 198-230 3-35 (394)
316 1vg0_A RAB proteins geranylger 97.2 0.00027 9.3E-09 66.8 5.3 42 1-42 7-48 (650)
317 3ps9_A TRNA 5-methylaminomethy 97.2 0.00035 1.2E-08 67.4 6.1 33 197-229 272-304 (676)
318 3dme_A Conserved exported prot 97.2 0.00021 7.2E-09 63.2 4.0 33 198-230 5-37 (369)
319 3q9t_A Choline dehydrogenase a 97.2 0.00019 6.6E-09 67.5 3.9 35 2-36 6-41 (577)
320 1ju2_A HydroxynitrIle lyase; f 97.2 0.00016 5.4E-09 67.7 3.2 34 3-37 27-60 (536)
321 3e1t_A Halogenase; flavoprotei 97.2 0.00018 6.1E-09 67.0 3.4 33 198-230 8-40 (512)
322 3ces_A MNMG, tRNA uridine 5-ca 97.2 0.00038 1.3E-08 65.8 5.5 32 198-229 29-60 (651)
323 3cgv_A Geranylgeranyl reductas 97.2 0.00012 4.3E-09 65.5 2.1 33 198-230 5-37 (397)
324 2zxi_A TRNA uridine 5-carboxym 97.2 0.00045 1.5E-08 65.1 5.9 32 198-229 28-59 (637)
325 1n4w_A CHOD, cholesterol oxida 97.1 0.00038 1.3E-08 64.6 5.2 37 2-38 5-41 (504)
326 1y56_A Hypothetical protein PH 97.1 0.00023 8E-09 65.9 3.1 84 198-283 109-222 (493)
327 2qa2_A CABE, polyketide oxygen 97.1 0.00045 1.5E-08 64.0 5.0 34 197-230 12-45 (499)
328 3fmw_A Oxygenase; mithramycin, 97.1 0.0002 6.8E-09 67.5 2.5 33 198-230 50-82 (570)
329 3atr_A Conserved archaeal prot 97.0 0.00026 8.9E-09 64.8 3.1 33 198-230 7-39 (453)
330 3nyc_A D-arginine dehydrogenas 97.0 0.00023 7.9E-09 63.3 2.5 33 197-230 9-41 (381)
331 1coy_A Cholesterol oxidase; ox 97.0 0.00054 1.8E-08 63.7 4.9 35 2-36 11-45 (507)
332 3c96_A Flavin-containing monoo 97.0 0.00041 1.4E-08 62.6 3.7 33 198-230 5-38 (410)
333 2qa1_A PGAE, polyketide oxygen 97.0 0.00056 1.9E-08 63.4 4.7 34 197-230 11-44 (500)
334 3fim_B ARYL-alcohol oxidase; A 97.0 0.0003 1E-08 66.0 2.7 36 2-37 2-38 (566)
335 3oz2_A Digeranylgeranylglycero 97.0 0.00029 1E-08 62.9 2.5 32 199-230 6-37 (397)
336 3pvc_A TRNA 5-methylaminomethy 96.9 0.00081 2.8E-08 65.0 5.6 34 197-230 264-297 (689)
337 3fwz_A Inner membrane protein 96.9 0.0011 3.8E-08 49.9 5.2 34 2-35 7-40 (140)
338 2jbv_A Choline oxidase; alcoho 96.9 0.00057 1.9E-08 64.1 3.9 36 2-37 13-49 (546)
339 1gpe_A Protein (glucose oxidas 96.8 0.00083 2.8E-08 63.5 4.7 35 3-37 25-60 (587)
340 4gde_A UDP-galactopyranose mut 96.8 0.001 3.6E-08 61.7 5.2 34 198-231 11-45 (513)
341 3cp8_A TRNA uridine 5-carboxym 96.8 0.0011 3.8E-08 62.6 5.3 32 198-229 22-53 (641)
342 3ic5_A Putative saccharopine d 96.8 0.0013 4.3E-08 47.6 4.4 35 1-35 4-39 (118)
343 3llv_A Exopolyphosphatase-rela 96.8 0.0015 5.2E-08 49.1 5.0 34 2-35 6-39 (141)
344 3ihg_A RDME; flavoenzyme, anth 96.8 0.00067 2.3E-08 63.5 3.3 33 198-230 6-38 (535)
345 2g1u_A Hypothetical protein TM 96.8 0.0017 5.8E-08 49.8 5.1 34 2-35 19-52 (155)
346 3dfz_A SIRC, precorrin-2 dehyd 96.7 0.00072 2.5E-08 55.0 2.5 36 195-230 29-64 (223)
347 1id1_A Putative potassium chan 96.6 0.0028 9.7E-08 48.4 5.5 33 2-34 3-35 (153)
348 1lss_A TRK system potassium up 96.5 0.0029 9.9E-08 47.3 5.0 33 3-35 5-37 (140)
349 1qo8_A Flavocytochrome C3 fuma 96.5 0.0015 5E-08 61.6 3.9 33 198-230 122-154 (566)
350 2r0c_A REBC; flavin adenine di 96.5 0.0019 6.6E-08 60.5 4.3 33 198-230 27-59 (549)
351 3i83_A 2-dehydropantoate 2-red 96.4 0.0033 1.1E-07 54.5 5.0 35 1-35 1-35 (320)
352 3jsk_A Cypbp37 protein; octame 96.3 0.0026 8.9E-08 55.4 4.1 33 198-230 80-114 (344)
353 4b63_A L-ornithine N5 monooxyg 96.3 0.043 1.5E-06 50.7 12.2 34 2-35 246-281 (501)
354 2hmt_A YUAA protein; RCK, KTN, 96.3 0.0041 1.4E-07 46.7 4.4 33 2-34 6-38 (144)
355 3hn2_A 2-dehydropantoate 2-red 96.2 0.0039 1.3E-07 53.9 4.3 35 1-35 1-35 (312)
356 3kkj_A Amine oxidase, flavin-c 96.2 0.0024 8.1E-08 53.6 2.9 32 199-230 4-35 (336)
357 3c85_A Putative glutathione-re 96.1 0.0062 2.1E-07 48.0 4.8 33 3-35 40-73 (183)
358 3g17_A Similar to 2-dehydropan 96.1 0.0047 1.6E-07 52.9 4.2 35 1-35 1-35 (294)
359 2gjc_A Thiazole biosynthetic e 96.0 0.0053 1.8E-07 53.1 4.3 32 199-230 67-100 (326)
360 3gg2_A Sugar dehydrogenase, UD 96.0 0.0062 2.1E-07 55.4 5.0 35 1-35 1-35 (450)
361 3l4b_C TRKA K+ channel protien 95.9 0.0072 2.5E-07 49.2 4.3 33 3-35 1-33 (218)
362 2raf_A Putative dinucleotide-b 95.7 0.012 4.2E-07 47.5 5.0 35 2-36 19-53 (209)
363 3ego_A Probable 2-dehydropanto 95.7 0.01 3.6E-07 51.1 4.7 34 1-35 1-34 (307)
364 3dfz_A SIRC, precorrin-2 dehyd 95.7 0.011 3.6E-07 48.1 4.5 33 2-34 31-63 (223)
365 1f0y_A HCDH, L-3-hydroxyacyl-C 95.6 0.012 4.2E-07 50.5 5.1 33 3-35 16-48 (302)
366 2ew2_A 2-dehydropantoate 2-red 95.6 0.011 3.8E-07 50.9 4.8 34 2-35 3-36 (316)
367 4ffl_A PYLC; amino acid, biosy 95.6 0.014 4.7E-07 51.6 5.4 35 2-36 1-35 (363)
368 4e12_A Diketoreductase; oxidor 95.6 0.013 4.6E-07 49.7 5.1 33 3-35 5-37 (283)
369 2hjr_A Malate dehydrogenase; m 95.6 0.015 5.2E-07 50.5 5.4 34 2-35 14-48 (328)
370 3ado_A Lambda-crystallin; L-gu 95.5 0.013 4.6E-07 50.4 4.9 33 3-35 7-39 (319)
371 2x5o_A UDP-N-acetylmuramoylala 95.5 0.0082 2.8E-07 54.5 3.7 35 2-36 5-39 (439)
372 3lk7_A UDP-N-acetylmuramoylala 95.5 0.013 4.5E-07 53.4 5.0 34 2-35 9-42 (451)
373 1ur5_A Malate dehydrogenase; o 95.5 0.016 5.4E-07 49.9 5.2 35 1-35 1-36 (309)
374 1z82_A Glycerol-3-phosphate de 95.5 0.014 4.9E-07 50.9 5.0 34 1-34 13-46 (335)
375 1kyq_A Met8P, siroheme biosynt 95.5 0.013 4.3E-07 49.3 4.3 33 2-34 13-45 (274)
376 4gbj_A 6-phosphogluconate dehy 95.4 0.012 4.1E-07 50.4 4.1 35 1-35 4-38 (297)
377 1ks9_A KPA reductase;, 2-dehyd 95.4 0.018 6E-07 49.0 5.2 34 3-36 1-34 (291)
378 3ius_A Uncharacterized conserv 95.4 0.014 4.7E-07 49.5 4.4 35 1-35 4-38 (286)
379 3dtt_A NADP oxidoreductase; st 95.3 0.02 6.8E-07 47.5 5.1 34 2-35 19-52 (245)
380 1lld_A L-lactate dehydrogenase 95.3 0.018 6E-07 49.9 5.0 34 2-35 7-42 (319)
381 4dio_A NAD(P) transhydrogenase 95.3 0.021 7.1E-07 50.7 5.4 34 2-35 190-223 (405)
382 3g0o_A 3-hydroxyisobutyrate de 95.2 0.019 6.5E-07 49.3 5.0 34 2-35 7-40 (303)
383 3qha_A Putative oxidoreductase 95.2 0.013 4.5E-07 50.1 3.9 35 2-36 15-49 (296)
384 1pzg_A LDH, lactate dehydrogen 95.2 0.02 6.8E-07 49.8 5.0 33 3-35 10-43 (331)
385 2dpo_A L-gulonate 3-dehydrogen 95.2 0.019 6.6E-07 49.5 4.9 33 3-35 7-39 (319)
386 4ezb_A Uncharacterized conserv 95.2 0.017 5.8E-07 50.0 4.5 35 1-35 23-58 (317)
387 2ewd_A Lactate dehydrogenase,; 95.2 0.02 7E-07 49.4 5.0 33 3-35 5-38 (317)
388 3gt0_A Pyrroline-5-carboxylate 95.1 0.023 8E-07 47.1 5.0 35 1-35 1-39 (247)
389 3ghy_A Ketopantoate reductase 95.1 0.022 7.6E-07 49.7 5.1 32 3-34 4-35 (335)
390 3lk7_A UDP-N-acetylmuramoylala 95.1 0.017 5.7E-07 52.7 4.3 79 195-286 7-90 (451)
391 3doj_A AT3G25530, dehydrogenas 95.1 0.023 7.8E-07 49.0 5.0 34 2-35 21-54 (310)
392 3g79_A NDP-N-acetyl-D-galactos 95.1 0.022 7.5E-07 52.0 5.0 35 2-36 18-54 (478)
393 3p2y_A Alanine dehydrogenase/p 95.1 0.021 7.1E-07 50.3 4.6 34 2-35 184-217 (381)
394 2y0c_A BCEC, UDP-glucose dehyd 95.1 0.021 7.3E-07 52.3 5.0 34 2-35 8-41 (478)
395 3k96_A Glycerol-3-phosphate de 95.1 0.021 7.2E-07 50.2 4.7 34 2-35 29-62 (356)
396 1zej_A HBD-9, 3-hydroxyacyl-CO 95.0 0.023 7.8E-07 48.4 4.7 33 2-35 12-44 (293)
397 3eag_A UDP-N-acetylmuramate:L- 95.0 0.018 6E-07 50.1 4.0 76 197-286 4-84 (326)
398 1vpd_A Tartronate semialdehyde 95.0 0.021 7.3E-07 48.8 4.4 35 1-35 4-38 (299)
399 1yj8_A Glycerol-3-phosphate de 94.9 0.02 6.8E-07 50.8 4.3 36 1-36 20-62 (375)
400 2g1u_A Hypothetical protein TM 94.9 0.024 8.4E-07 43.2 4.2 38 193-230 15-52 (155)
401 3pef_A 6-phosphogluconate dehy 94.9 0.026 9.1E-07 47.9 4.8 34 2-35 1-34 (287)
402 2vns_A Metalloreductase steap3 94.9 0.031 1.1E-06 45.3 5.0 33 3-35 29-61 (215)
403 3ihm_A Styrene monooxygenase A 94.8 0.015 5.1E-07 52.7 3.2 33 198-230 23-55 (430)
404 3oj0_A Glutr, glutamyl-tRNA re 94.8 0.011 3.9E-07 44.4 2.0 34 2-35 21-54 (144)
405 4huj_A Uncharacterized protein 94.8 0.014 4.9E-07 47.5 2.7 33 2-34 23-56 (220)
406 3c24_A Putative oxidoreductase 94.8 0.034 1.2E-06 47.2 5.1 34 2-35 11-45 (286)
407 3pdu_A 3-hydroxyisobutyrate de 94.7 0.023 7.9E-07 48.3 4.0 33 3-35 2-34 (287)
408 2h78_A Hibadh, 3-hydroxyisobut 94.7 0.029 9.8E-07 48.1 4.5 34 2-35 3-36 (302)
409 1bg6_A N-(1-D-carboxylethyl)-L 94.7 0.032 1.1E-06 49.0 5.0 33 3-35 5-37 (359)
410 3hwr_A 2-dehydropantoate 2-red 94.7 0.034 1.1E-06 48.1 4.9 32 2-34 19-50 (318)
411 3k6j_A Protein F01G10.3, confi 94.7 0.034 1.2E-06 50.4 5.1 33 3-35 55-87 (460)
412 3eag_A UDP-N-acetylmuramate:L- 94.6 0.037 1.3E-06 48.0 5.1 34 2-35 4-38 (326)
413 3g5s_A Methylenetetrahydrofola 94.6 0.018 6.1E-07 51.0 3.0 33 198-230 2-34 (443)
414 1jw9_B Molybdopterin biosynthe 94.6 0.034 1.1E-06 46.2 4.6 32 3-34 32-64 (249)
415 2p4q_A 6-phosphogluconate dehy 94.6 0.035 1.2E-06 51.1 5.1 35 1-35 9-43 (497)
416 3ggo_A Prephenate dehydrogenas 94.6 0.038 1.3E-06 47.6 5.1 34 2-35 33-68 (314)
417 2a9f_A Putative malic enzyme ( 94.6 0.036 1.2E-06 48.7 4.9 33 2-34 188-221 (398)
418 2pv7_A T-protein [includes: ch 94.6 0.034 1.2E-06 47.6 4.7 34 2-35 21-55 (298)
419 4dll_A 2-hydroxy-3-oxopropiona 94.6 0.034 1.2E-06 48.1 4.7 33 3-35 32-64 (320)
420 2v6b_A L-LDH, L-lactate dehydr 94.6 0.037 1.3E-06 47.5 4.9 33 3-35 1-35 (304)
421 3l6d_A Putative oxidoreductase 94.6 0.039 1.3E-06 47.4 5.0 34 2-35 9-42 (306)
422 4g65_A TRK system potassium up 94.5 0.015 5.3E-07 53.0 2.6 34 2-35 3-36 (461)
423 3nrn_A Uncharacterized protein 94.5 0.023 7.9E-07 51.2 3.6 33 198-230 1-33 (421)
424 1x13_A NAD(P) transhydrogenase 94.5 0.038 1.3E-06 49.4 4.9 34 2-35 172-205 (401)
425 1t2d_A LDH-P, L-lactate dehydr 94.5 0.044 1.5E-06 47.4 5.2 34 2-35 4-38 (322)
426 1zcj_A Peroxisomal bifunctiona 94.4 0.037 1.3E-06 50.6 4.8 33 3-35 38-70 (463)
427 4a7p_A UDP-glucose dehydrogena 94.4 0.04 1.4E-06 49.9 4.9 35 3-37 9-43 (446)
428 3c4a_A Probable tryptophan hyd 94.4 0.022 7.7E-07 50.5 3.3 33 199-231 2-36 (381)
429 2oln_A NIKD protein; flavoprot 94.4 0.023 8E-07 50.6 3.4 33 198-230 5-37 (397)
430 1vl6_A Malate oxidoreductase; 94.4 0.042 1.4E-06 48.2 4.8 33 2-34 192-225 (388)
431 2iid_A L-amino-acid oxidase; f 94.4 0.024 8.1E-07 52.3 3.5 36 196-231 32-67 (498)
432 3gpi_A NAD-dependent epimerase 94.4 0.055 1.9E-06 45.8 5.5 34 2-35 3-36 (286)
433 1l7d_A Nicotinamide nucleotide 94.4 0.048 1.7E-06 48.5 5.3 34 2-35 172-205 (384)
434 3l9w_A Glutathione-regulated p 94.3 0.045 1.5E-06 49.1 5.1 35 2-36 4-38 (413)
435 1kyq_A Met8P, siroheme biosynt 94.3 0.036 1.2E-06 46.5 4.2 36 196-231 12-47 (274)
436 1ryi_A Glycine oxidase; flavop 94.3 0.023 7.7E-07 50.4 3.1 33 198-230 18-50 (382)
437 1evy_A Glycerol-3-phosphate de 94.3 0.022 7.5E-07 50.3 3.0 32 4-35 17-48 (366)
438 2x5o_A UDP-N-acetylmuramoylala 94.3 0.042 1.4E-06 49.9 4.8 75 195-283 3-79 (439)
439 1mv8_A GMD, GDP-mannose 6-dehy 94.2 0.038 1.3E-06 50.1 4.4 33 3-35 1-33 (436)
440 3pid_A UDP-glucose 6-dehydroge 94.2 0.043 1.5E-06 49.3 4.6 32 3-35 37-68 (432)
441 2qyt_A 2-dehydropantoate 2-red 94.2 0.034 1.2E-06 47.9 3.9 32 2-33 8-45 (317)
442 3vtf_A UDP-glucose 6-dehydroge 94.2 0.045 1.5E-06 49.3 4.8 34 2-35 21-54 (444)
443 3phh_A Shikimate dehydrogenase 94.2 0.062 2.1E-06 45.0 5.3 34 2-35 118-151 (269)
444 1txg_A Glycerol-3-phosphate de 94.1 0.045 1.5E-06 47.5 4.6 31 3-33 1-31 (335)
445 3gvi_A Malate dehydrogenase; N 94.1 0.062 2.1E-06 46.4 5.3 34 2-35 7-41 (324)
446 3c7a_A Octopine dehydrogenase; 94.1 0.026 9E-07 50.6 3.1 32 1-32 1-33 (404)
447 1c0p_A D-amino acid oxidase; a 94.1 0.034 1.2E-06 48.9 3.8 32 198-229 7-38 (363)
448 2gf3_A MSOX, monomeric sarcosi 94.1 0.026 9E-07 50.0 3.1 33 198-230 4-36 (389)
449 1guz_A Malate dehydrogenase; o 94.1 0.057 1.9E-06 46.4 5.0 33 3-35 1-35 (310)
450 2uzz_A N-methyl-L-tryptophan o 94.1 0.02 6.9E-07 50.5 2.3 33 198-230 3-35 (372)
451 1jay_A Coenzyme F420H2:NADP+ o 94.1 0.055 1.9E-06 43.5 4.7 33 3-35 1-34 (212)
452 2o3j_A UDP-glucose 6-dehydroge 94.0 0.041 1.4E-06 50.5 4.3 34 2-35 9-44 (481)
453 1pjc_A Protein (L-alanine dehy 94.0 0.062 2.1E-06 47.3 5.3 33 3-35 168-200 (361)
454 1hdo_A Biliverdin IX beta redu 94.0 0.068 2.3E-06 42.5 5.1 33 3-35 4-37 (206)
455 3tl2_A Malate dehydrogenase; c 94.0 0.061 2.1E-06 46.3 5.0 32 3-34 9-41 (315)
456 1y6j_A L-lactate dehydrogenase 94.0 0.059 2E-06 46.5 4.9 33 3-35 8-42 (318)
457 3mog_A Probable 3-hydroxybutyr 94.0 0.056 1.9E-06 49.5 5.0 33 3-35 6-38 (483)
458 1hyh_A L-hicdh, L-2-hydroxyiso 94.0 0.052 1.8E-06 46.7 4.6 33 3-35 2-36 (309)
459 4e21_A 6-phosphogluconate dehy 94.0 0.058 2E-06 47.4 5.0 33 3-35 23-55 (358)
460 3tri_A Pyrroline-5-carboxylate 94.0 0.068 2.3E-06 45.2 5.2 34 2-35 3-39 (280)
461 3nks_A Protoporphyrinogen oxid 93.9 0.035 1.2E-06 50.8 3.7 34 198-231 3-38 (477)
462 2e1m_A L-glutamate oxidase; L- 93.9 0.04 1.4E-06 48.7 3.7 34 196-229 43-76 (376)
463 1y56_B Sarcosine oxidase; dehy 93.9 0.028 9.5E-07 49.8 2.8 33 198-230 6-38 (382)
464 2uyy_A N-PAC protein; long-cha 93.8 0.064 2.2E-06 46.2 4.9 33 3-35 31-63 (316)
465 1a5z_A L-lactate dehydrogenase 93.8 0.056 1.9E-06 46.7 4.5 33 3-35 1-35 (319)
466 2rcy_A Pyrroline carboxylate r 93.8 0.063 2.2E-06 44.8 4.8 33 3-35 5-41 (262)
467 2i6t_A Ubiquitin-conjugating e 93.8 0.062 2.1E-06 46.0 4.7 34 2-35 14-49 (303)
468 3r6d_A NAD-dependent epimerase 93.8 0.083 2.8E-06 42.7 5.3 35 1-35 4-40 (221)
469 3e8x_A Putative NAD-dependent 93.8 0.072 2.5E-06 43.6 4.9 34 2-35 21-55 (236)
470 2g5c_A Prephenate dehydrogenas 93.7 0.07 2.4E-06 45.1 5.0 33 3-35 2-36 (281)
471 3qsg_A NAD-binding phosphogluc 93.7 0.056 1.9E-06 46.5 4.4 32 3-34 25-57 (312)
472 2vvm_A Monoamine oxidase N; FA 93.7 0.092 3.1E-06 48.3 6.1 57 103-166 255-312 (495)
473 1nyt_A Shikimate 5-dehydrogena 93.7 0.078 2.7E-06 44.6 5.1 33 2-34 119-151 (271)
474 3k7m_X 6-hydroxy-L-nicotine ox 93.7 0.033 1.1E-06 50.2 3.0 32 199-230 3-34 (431)
475 3vps_A TUNA, NAD-dependent epi 93.7 0.078 2.7E-06 45.5 5.2 34 2-35 7-41 (321)
476 2eez_A Alanine dehydrogenase; 93.7 0.078 2.7E-06 46.8 5.3 34 2-35 166-199 (369)
477 3m2p_A UDP-N-acetylglucosamine 93.7 0.075 2.6E-06 45.5 5.1 34 1-34 1-35 (311)
478 2f1k_A Prephenate dehydrogenas 93.7 0.071 2.4E-06 45.0 4.8 33 3-35 1-33 (279)
479 3ew7_A LMO0794 protein; Q8Y8U8 93.6 0.084 2.9E-06 42.5 5.1 33 3-35 1-34 (221)
480 4gwg_A 6-phosphogluconate dehy 93.6 0.073 2.5E-06 48.6 5.1 35 2-36 4-38 (484)
481 3p7m_A Malate dehydrogenase; p 93.6 0.087 3E-06 45.5 5.3 33 3-35 6-39 (321)
482 2jae_A L-amino acid oxidase; o 93.6 0.048 1.6E-06 50.1 4.0 36 196-231 10-45 (489)
483 2b9w_A Putative aminooxidase; 93.6 0.04 1.4E-06 49.6 3.3 35 197-231 6-41 (424)
484 2vhw_A Alanine dehydrogenase; 93.6 0.083 2.8E-06 46.8 5.3 34 2-35 168-201 (377)
485 4b4o_A Epimerase family protei 93.5 0.095 3.2E-06 44.6 5.5 34 3-36 1-35 (298)
486 3rui_A Ubiquitin-like modifier 93.5 0.084 2.9E-06 45.7 5.0 33 2-34 34-67 (340)
487 1x0v_A GPD-C, GPDH-C, glycerol 93.5 0.046 1.6E-06 48.0 3.5 34 3-36 9-49 (354)
488 1yqg_A Pyrroline-5-carboxylate 93.5 0.073 2.5E-06 44.5 4.6 33 3-35 1-34 (263)
489 2aef_A Calcium-gated potassium 93.5 0.028 9.7E-07 46.1 2.0 33 2-35 9-41 (234)
490 1pjq_A CYSG, siroheme synthase 93.5 0.075 2.5E-06 48.4 4.9 35 196-230 11-45 (457)
491 3ktd_A Prephenate dehydrogenas 93.5 0.086 3E-06 45.9 5.1 34 2-35 8-41 (341)
492 2egg_A AROE, shikimate 5-dehyd 93.5 0.079 2.7E-06 45.2 4.8 34 2-35 141-175 (297)
493 2zyd_A 6-phosphogluconate dehy 93.4 0.066 2.3E-06 49.1 4.5 34 2-35 15-48 (480)
494 2cvz_A Dehydrogenase, 3-hydrox 93.4 0.06 2.1E-06 45.6 4.0 32 3-35 2-33 (289)
495 2gag_B Heterotetrameric sarcos 93.4 0.037 1.3E-06 49.4 2.8 33 198-230 22-56 (405)
496 1oju_A MDH, malate dehydrogena 93.4 0.074 2.5E-06 45.2 4.5 33 3-35 1-35 (294)
497 2gf2_A Hibadh, 3-hydroxyisobut 93.4 0.072 2.5E-06 45.4 4.5 33 3-35 1-33 (296)
498 1dlj_A UDP-glucose dehydrogena 93.4 0.055 1.9E-06 48.4 3.9 32 3-35 1-32 (402)
499 3cky_A 2-hydroxymethyl glutara 93.4 0.075 2.6E-06 45.4 4.6 34 2-35 4-37 (301)
500 1pjq_A CYSG, siroheme synthase 93.4 0.075 2.6E-06 48.4 4.8 33 2-34 12-44 (457)
No 1
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=100.00 E-value=2e-38 Score=293.34 Aligned_cols=306 Identities=29% Similarity=0.495 Sum_probs=235.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHHH---cCCc---EEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhccc
Q 018550 1 MFRHVAVIGAGAAGLVVGHELLR---EGHT---VVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLP 74 (354)
Q Consensus 1 ~~~~vvIIG~G~aG~~~a~~l~~---~g~~---v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (354)
|.++|+|||||++|+++|..|++ .|++ |+|||+++.+||.|.+.... +|.+.....++..|..+..+.+
T Consensus 1 M~~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~-----g~~~~g~~~~~~~y~~l~~~~~ 75 (464)
T 2xve_A 1 MATRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRT-----GLDENGEPVHSSMYRYLWSNGP 75 (464)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCC-----SBCTTSSBCCCCCCTTCBCSSC
T ss_pred CCCcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCC-----CccccCCCCcCccccchhhcCC
Confidence 67899999999999999999999 9999 99999998999999875332 3333333345667887888888
Q ss_pred cccccccCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCC-CcEEEEEeec-CCceEE
Q 018550 75 RELMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVES-NKWKVKSRKK-DDVVEE 152 (354)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~-~~~~v~~~~g-~~~~~~ 152 (354)
...+.+++++++... ..+...|+++..+.+|+.++++++++...++++++|++++..++ +.|+|++.++ .+...+
T Consensus 76 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~ 152 (464)
T 2xve_A 76 KECLEFADYTFDEHF---GKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYS 152 (464)
T ss_dssp GGGTCBTTBCHHHHH---SSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEE
T ss_pred hhhcccCCCCCCccc---CCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEE
Confidence 887777777654320 01235678889999999999999998766899999999998762 3799998774 222357
Q ss_pred EEeCEEEEeeCCCCCcccCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCCc
Q 018550 153 ETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVAD 232 (354)
Q Consensus 153 ~~~d~vIlAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~~ 232 (354)
+.||+||+|||+++.|+.|.++|.+.+.+..+++..+++...+.+++|+|||+|.+|+|+|..|++.|++|+++++++..
T Consensus 153 ~~~d~VVvAtG~~s~p~~p~ipG~~~~~g~~~hs~~~~~~~~~~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~ 232 (464)
T 2xve_A 153 EEFDYVVCCTGHFSTPYVPEFEGFEKFGGRILHAHDFRDALEFKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAP 232 (464)
T ss_dssp EEESEEEECCCSSSSBCCCCCBTTTTCCSEEEEGGGCCCGGGGTTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCC
T ss_pred EEcCEEEECCCCCCCCccCCCCCcccCCceEEehhhhCCHhHcCCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCC
Confidence 89999999999999999999999988888889998888777778999999999999999999999999999999987641
Q ss_pred cccccCCCCCCeEEecceeEEecCCcEEEccCcEEecCEEEEcccCCCccCcccccCc-hhh------------------
Q 018550 233 ETHEKQPGYDNMWLHSMVERANEDGTVVFRNGRVVSADVIMHCTGLTGTSTTTLFLKP-MAL------------------ 293 (354)
Q Consensus 233 ~~~~~l~~~~~~~~~~~v~~v~~~~~v~~~~g~~~~~D~vi~a~G~~~~~p~~~~l~~-~~~------------------ 293 (354)
.. ..+. ..+.....|+++.+++ |++.||+++++|.||+|||++| +.++|.. .+.
T Consensus 233 ~~-~~~~--~~V~~~~~V~~i~~~~-V~~~dG~~i~~D~Vi~atG~~p---~~~~l~~~~gl~~~~~~~v~~~~~~~~~t 305 (464)
T 2xve_A 233 MG-YKWP--ENWDERPNLVRVDTEN-AYFADGSSEKVDAIILCTGYIH---HFPFLNDDLRLVTNNRLWPLNLYKGVVWE 305 (464)
T ss_dssp CC-CCCC--TTEEECSCEEEECSSE-EEETTSCEEECSEEEECCCBCC---CCTTBCTTTCCCCCSSSCCSSEETTTEES
T ss_pred CC-CCCC--CceEEcCCeEEEeCCE-EEECCCCEEeCCEEEECCCCCC---CCCCcCcccccccCCCcccccccceEecC
Confidence 10 0111 2444448899987665 9999999999999999999994 4444432 111
Q ss_pred hhceeeeecccchh-----hHHHHHHHhhhccC
Q 018550 294 LLWMTIVLGHCTST-----FFRQSWHQAFHLLG 321 (354)
Q Consensus 294 ~~~~i~a~GD~~~~-----~~~~~~~~~~~~~~ 321 (354)
...+||++||+... ...|+...+.++.|
T Consensus 306 ~~p~i~aiGd~~~~~~~~~a~~qa~~~a~~l~G 338 (464)
T 2xve_A 306 DNPKFFYIGMQDQWYSFNMFDAQAWYARDVIMG 338 (464)
T ss_dssp SSTTEEECSCSCCSSCHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEeCcccccchHHHHHHHHHHHHHHcC
Confidence 01349999998862 23455555555544
No 2
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=6.5e-36 Score=268.28 Aligned_cols=264 Identities=24% Similarity=0.399 Sum_probs=206.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
+++|+|||||++|+++|..|+++|++|+|||+++.+||.|.+. |+.+....+.....++
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~---------------------~~~~~~~~~~~~~~~~ 61 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHA---------------------WHSLHLFSPAGWSSIP 61 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGS---------------------CTTCBCSSCGGGSCCS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCC---------------------CCCcEecCchhhhhCC
Confidence 3689999999999999999999999999999999999999862 2222233333333343
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEE-EEEeecCCceEEEEeCEEEE
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWK-VKSRKKDDVVEEETFDAVVV 160 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~-v~~~~g~~~~~~~~~d~vIl 160 (354)
.++.. .....|+.+.++.+++.+.+++++++ ++++++|++++..+ +.|. +++.++ ++.||+||+
T Consensus 62 ~~~~~-------~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~v~~i~~~~-~~~~~v~~~~g-----~~~~d~vV~ 126 (357)
T 4a9w_A 62 GWPMP-------ASQGPYPARAEVLAYLAQYEQKYALP--VLRPIRVQRVSHFG-ERLRVVARDGR-----QWLARAVIS 126 (357)
T ss_dssp SSCCC-------CCSSSSCBHHHHHHHHHHHHHHTTCC--EECSCCEEEEEEET-TEEEEEETTSC-----EEEEEEEEE
T ss_pred CCCCC-------CCccCCCCHHHHHHHHHHHHHHcCCE--EEcCCEEEEEEECC-CcEEEEEeCCC-----EEEeCEEEE
Confidence 43332 23456778899999999999999999 99999999999887 7788 776654 789999999
Q ss_pred eeCCCCCcccCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC---c-----
Q 018550 161 CNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA---D----- 232 (354)
Q Consensus 161 AtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~---~----- 232 (354)
|||.++.|+.|.++|...+.+..++...+.+.....+++++|||+|.+|+|+|..|++.+ +|+++++++. .
T Consensus 127 AtG~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~~~~~~~~~~~ 205 (357)
T 4a9w_A 127 ATGTWGEAYTPEYQGLESFAGIQLHSAHYSTPAPFAGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHEPAFLADDVDG 205 (357)
T ss_dssp CCCSGGGBCCCCCTTGGGCCSEEEEGGGCCCSGGGTTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSCCCBCCTTCCT
T ss_pred CCCCCCCCCCCCCCCccccCCcEEEeccCCChhhcCCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCCCeecchhhcC
Confidence 999888888999999988888888888888777778899999999999999999999998 5999998742 0
Q ss_pred -----cccccCC----------------------------CCCCeEEecceeEEecCCcEEEccCcEEecCEEEEcccCC
Q 018550 233 -----ETHEKQP----------------------------GYDNMWLHSMVERANEDGTVVFRNGRVVSADVIMHCTGLT 279 (354)
Q Consensus 233 -----~~~~~l~----------------------------~~~~~~~~~~v~~v~~~~~v~~~~g~~~~~D~vi~a~G~~ 279 (354)
...+++. +.+.+.....+.++..++ +++.+|+++++|+||+|+|++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~v~~~~~~~-v~~~~g~~i~~D~vi~a~G~~ 284 (357)
T 4a9w_A 206 RVLFERATERWKAQQEGREPDLPPGGFGDIVMVPPVLDARARGVLAAVPPPARFSPTG-MQWADGTERAFDAVIWCTGFR 284 (357)
T ss_dssp HHHHTC----------------------CBCCCHHHHHHHHTTCCCEECCCSEEETTE-EECTTSCEEECSEEEECCCBC
T ss_pred ccHHHHHHHHHhccccccCCCcccccccCcccChhHHHHHhcCceEEecCcceEeCCe-eEECCCCEecCCEEEECCCcC
Confidence 0111121 223456667777777766 999999999999999999999
Q ss_pred CccCcccccCchhhh-----------------hceeeeec--ccch
Q 018550 280 GTSTTTLFLKPMALL-----------------LWMTIVLG--HCTS 306 (354)
Q Consensus 280 ~~~p~~~~l~~~~~~-----------------~~~i~a~G--D~~~ 306 (354)
|++++++..+.. ..+|||+| ||..
T Consensus 285 ---p~~~~l~~~gl~~~~G~i~vd~~~l~~t~~~~vya~Gd~d~~~ 327 (357)
T 4a9w_A 285 ---PALSHLKGLDLVTPQGQVEVDGSGLRALAVPSVWLLGYGDWNG 327 (357)
T ss_dssp ---CCCGGGTTTTCBCTTSCBCBCTTSCBBSSCTTEEECSSCGGGS
T ss_pred ---CCCcccCcccccCCCCCccccCCcccCCCCCCeEEeccccccc
Confidence 777777653321 23499999 5553
No 3
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=100.00 E-value=2.3e-35 Score=272.42 Aligned_cols=299 Identities=28% Similarity=0.470 Sum_probs=224.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCC--cEEEEeeCCCccceeecCCCCCCCCCCCCCC-------C--------Cccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGH--TVVVYEKGEQVGGSWIYTSETESDPLGVDPN-------R--------YPVHSS 64 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~--~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~-------~--------~~~~~~ 64 (354)
.++|+|||||++|+++|..|++.|. +|+|||+.+.+||.|.+....... ...|. . ....+.
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~--~~ip~~~~~~~~~~~~~g~~~~~~~~~ 83 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNK--LPVPSTNPILTTEPIVGPAALPVYPSP 83 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSC--CCSSBCCTTCCCCCBCCSSSCCBCCCC
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcc--cccccccccccccccccccccCCccCc
Confidence 4799999999999999999999999 999999998999999875432100 00010 0 011244
Q ss_pred ccccchhccccccccccCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEe
Q 018550 65 LYKSLRVNLPRELMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSR 144 (354)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~ 144 (354)
.|..+..+.+...+.+.++++.. ....|+.+..+.+|+.+++++++.. ++++++|++++..+ +.|.|++.
T Consensus 84 ~~~~l~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~l~~~~~~~~~~--i~~~t~V~~v~~~~-~~~~V~~~ 153 (447)
T 2gv8_A 84 LYRDLQTNTPIELMGYCDQSFKP-------QTLQFPHRHTIQEYQRIYAQPLLPF--IKLATDVLDIEKKD-GSWVVTYK 153 (447)
T ss_dssp CCTTCBCSSCHHHHSCTTCCCCT-------TCCSSCBHHHHHHHHHHHHGGGGGG--EECSEEEEEEEEET-TEEEEEEE
T ss_pred hhhhhccCCCHHHhccCCCCCCC-------CCCCCCCHHHHHHHHHHHHHHhhCe--EEeCCEEEEEEeCC-CeEEEEEe
Confidence 56666666666666666666543 2456788899999999999888766 89999999999876 78999987
Q ss_pred ec-CCc-eEEEEeCEEEEeeCCCCCcccCCCCCCCCC----CcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhc
Q 018550 145 KK-DDV-VEEETFDAVVVCNGHFSVPRLAQVPGIDSW----PGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAG 218 (354)
Q Consensus 145 ~g-~~~-~~~~~~d~vIlAtG~~s~~~~p~~~g~~~~----~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~ 218 (354)
+. ++. ..++.||+||+|||+++.|+.|.++|.+.+ .+.++++..+++...+.+++|+|||+|.+|+|+|..|++
T Consensus 154 ~~~~G~~~~~~~~d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v~~~~~~~~~~~~~~k~VvVvG~G~sg~e~A~~l~~ 233 (447)
T 2gv8_A 154 GTKAGSPISKDIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFREPELFVGESVLVVGGASSANDLVRHLTP 233 (447)
T ss_dssp ESSTTCCEEEEEESEEEECCCSSSSBCBCCCBTHHHHHHHSTTSEEEGGGCCCGGGGTTCCEEEECSSHHHHHHHHHHTT
T ss_pred ecCCCCeeEEEEeCEEEECCCCCCCCCCCCCCChhhhhccCCccEEEecccCChhhcCCCEEEEEccCcCHHHHHHHHHH
Confidence 62 121 247899999999998889999999997653 566788888887777789999999999999999999999
Q ss_pred cCCE-EEEEEecCCccccccCCCCCCeEEecceeEEecC-CcEEEccCcE-EecCEEEEcccCCCccCcccc-----cCc
Q 018550 219 FAKE-VHIASRSVADETHEKQPGYDNMWLHSMVERANED-GTVVFRNGRV-VSADVIMHCTGLTGTSTTTLF-----LKP 290 (354)
Q Consensus 219 ~g~~-v~~~~r~~~~~~~~~l~~~~~~~~~~~v~~v~~~-~~v~~~~g~~-~~~D~vi~a~G~~~~~p~~~~-----l~~ 290 (354)
.+++ |++++|++.. + ....+.....|+++..+ ..|++.||+. +++|.||+|||++ |+++| ++.
T Consensus 234 ~~~~~V~l~~r~~~~-----l-~~~~i~~~~~v~~~~~~~~~v~~~dG~~~~~~D~vi~atG~~---~~~~~l~~~~l~~ 304 (447)
T 2gv8_A 234 VAKHPIYQSLLGGGD-----I-QNESLQQVPEITKFDPTTREIYLKGGKVLSNIDRVIYCTGYL---YSVPFPSLAKLKS 304 (447)
T ss_dssp TSCSSEEEECTTCCS-----C-BCSSEEEECCEEEEETTTTEEEETTTEEECCCSEEEECCCBC---CCCCCHHHHSCCS
T ss_pred HhCCcEEEEeCCCCc-----C-CCCCeEEecCeEEEecCCCEEEECCCCEeccCCEEEECCCCC---cCCCCCccccccc
Confidence 9999 9999998632 2 23356678899999643 3499999976 7899999999999 55555 443
Q ss_pred h--hh-----------------hhceeeeecccchh-----hHHHHHHHhhhccC
Q 018550 291 M--AL-----------------LLWMTIVLGHCTST-----FFRQSWHQAFHLLG 321 (354)
Q Consensus 291 ~--~~-----------------~~~~i~a~GD~~~~-----~~~~~~~~~~~~~~ 321 (354)
. .. ....+|++||+... ...|+...|.++.|
T Consensus 305 ~~~~i~~~~~~~~~~~~~v~~~~~p~l~~~G~~~~~~~~~~a~~qa~~~a~~~~g 359 (447)
T 2gv8_A 305 PETKLIDDGSHVHNVYQHIFYIPDPTLAFVGLALHVVPFPTSQAQAAFLARVWSG 359 (447)
T ss_dssp TTTCCCSSSSSCCSEETTTEETTCTTEEESSCCBSSCHHHHHHHHHHHHHHHHTT
T ss_pred ccCceecCCCcccccccccccCCCCcEEEEeccccccCchHHHHHHHHHHHHHcC
Confidence 2 00 12338999998763 23456666666644
No 4
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=100.00 E-value=1.8e-33 Score=263.87 Aligned_cols=202 Identities=24% Similarity=0.409 Sum_probs=162.5
Q ss_pred CeEEEEcCChHHHHHHHHHH-HcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 3 RHVAVIGAGAAGLVVGHELL-REGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~-~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
++|+|||||++|+++|..|+ +.|++|+|||+++.+||+|..+ .|+.+....+...+.+.
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~--------------------~ypg~~~d~~s~~~~~~ 68 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWN--------------------RYPGALSDTESHLYRFS 68 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHC--------------------CCTTCEEEEEGGGSSCC
T ss_pred CCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCccccc--------------------CCCCceecCCcceeeec
Confidence 68999999999999999999 9999999999999999999864 12222222222222211
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCC-CcEEEEEeecCCceEEEEeCEEEE
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVES-NKWKVKSRKKDDVVEEETFDAVVV 160 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~-~~~~v~~~~g~~~~~~~~~d~vIl 160 (354)
+.........+...|+...++.+|+.+.++++++..+++++++|++++++++ +.|+|++.+|. ++.||+||+
T Consensus 69 ---~~~~~~~~~~~~~~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~----~i~ad~lV~ 141 (540)
T 3gwf_A 69 ---FDRDLLQESTWKTTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGE----VYRAKYVVN 141 (540)
T ss_dssp ---SCHHHHHHCCCSBSEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSC----EEEEEEEEE
T ss_pred ---cccccccCCCCcccCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCC----EEEeCEEEE
Confidence 1000000012334566779999999999999999555999999999998763 48999998775 799999999
Q ss_pred eeCCCCCcccCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC
Q 018550 161 CNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA 231 (354)
Q Consensus 161 AtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~ 231 (354)
|||.++.|+.|+++|.+.+.+..+++..+.......+++|+|||+|.+|+|+|..|++.+++|+++.|++.
T Consensus 142 AtG~~s~p~~p~ipG~~~f~g~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 142 AVGLLSAINFPNLPGLDTFEGETIHTAAWPEGKSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp CCCSCCSBCCCCCTTGGGCCSEEEEGGGCCSSCCCTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred CCcccccCCCCCCCCccccCCCEEEeecCCCccccccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 99998899999999999998999999888877777899999999999999999999999999999999875
No 5
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=100.00 E-value=1.5e-33 Score=249.42 Aligned_cols=246 Identities=21% Similarity=0.239 Sum_probs=190.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
+++|+|||||++|+++|..|++.|++|+|||++ +||.|...+.. ..++
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~~~~~------------------------------~~~~ 62 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTEAGIV------------------------------DDYL 62 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGGCCEE------------------------------CCST
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeecccccc------------------------------cccC
Confidence 479999999999999999999999999999997 88888762110 0011
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEe
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlA 161 (354)
.++. ....++.+++.+.+.+++++ +++ .+|++++.++ +.|.+.+.++. ++.||+||+|
T Consensus 63 ~~~~--------------~~~~~~~~~~~~~~~~~~v~--~~~-~~v~~i~~~~-~~~~v~~~~g~----~~~~d~lvlA 120 (323)
T 3f8d_A 63 GLIE--------------IQASDMIKVFNKHIEKYEVP--VLL-DIVEKIENRG-DEFVVKTKRKG----EFKADSVILG 120 (323)
T ss_dssp TSTT--------------EEHHHHHHHHHHHHHTTTCC--EEE-SCEEEEEEC---CEEEEESSSC----EEEEEEEEEC
T ss_pred CCCC--------------CCHHHHHHHHHHHHHHcCCE--EEE-EEEEEEEecC-CEEEEEECCCC----EEEcCEEEEC
Confidence 1111 12378899999999999998 777 8999999876 78889887764 8999999999
Q ss_pred eCCCCCcccCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC----cccccc
Q 018550 162 NGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA----DETHEK 237 (354)
Q Consensus 162 tG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~----~~~~~~ 237 (354)
|| +.++.|.++|...+.+..++.....+.....+++++|||+|.+|+|+|..|.+.+.+|+++++.+. +...++
T Consensus 121 tG--~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~ 198 (323)
T 3f8d_A 121 IG--VKRRKLGVPGEQEFAGRGISYCSVADAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQPIYVET 198 (323)
T ss_dssp CC--CEECCCCCTTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCSCHHHHHH
T ss_pred cC--CCCccCCCCchhhhcCCceEEeccCCHhHcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCcCHHHHHH
Confidence 99 678889999988765555555444444455789999999999999999999999999999999875 223333
Q ss_pred CC-CCC-CeEEecceeEEecCCc---EEEcc---Cc--EEecCEEEEcccCCCccCcccccCchhhh-------------
Q 018550 238 QP-GYD-NMWLHSMVERANEDGT---VVFRN---GR--VVSADVIMHCTGLTGTSTTTLFLKPMALL------------- 294 (354)
Q Consensus 238 l~-~~~-~~~~~~~v~~v~~~~~---v~~~~---g~--~~~~D~vi~a~G~~~~~p~~~~l~~~~~~------------- 294 (354)
+. +.+ +++.++.|+++..++. |++.+ |+ ++++|.|++|+|+. |++++++..+..
T Consensus 199 ~~~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~---p~~~~~~~~g~~~~~~g~i~vd~~~ 275 (323)
T 3f8d_A 199 VKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFD---PPTDFAKSNGIETDTNGYIKVDEWM 275 (323)
T ss_dssp HHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEE---CCHHHHHHTTCCBCTTSSBCCCTTC
T ss_pred HHhCCCcEEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEEEEEECCC---CChhHHhhcCeeecCCCcEecCCCc
Confidence 43 334 8888899999987653 66766 65 78999999999999 776676544322
Q ss_pred ---hceeeeecccch
Q 018550 295 ---LWMTIVLGHCTS 306 (354)
Q Consensus 295 ---~~~i~a~GD~~~ 306 (354)
..+|||+|||+.
T Consensus 276 ~t~~~~vya~GD~~~ 290 (323)
T 3f8d_A 276 RTSVPGVFAAGDCTS 290 (323)
T ss_dssp BCSSTTEEECSTTBS
T ss_pred eecCCCEEEcceecC
Confidence 245999999987
No 6
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=100.00 E-value=7.4e-34 Score=252.41 Aligned_cols=251 Identities=18% Similarity=0.232 Sum_probs=193.8
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhccccccccccC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (354)
++|+|||||++|+++|..|++.|++|+|||+.+.+||.|... |+. .....++.
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~---------------------~~~------~~~~~~~~ 60 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSAL---------------------YPE------KYIYDVAG 60 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHH---------------------CTT------SEECCSTT
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhc---------------------CCC------ceEeccCC
Confidence 689999999999999999999999999999999999998641 000 00001111
Q ss_pred CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEee
Q 018550 83 YPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCN 162 (354)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlAt 162 (354)
++. ....++..++.+.+.+++++ ++++++|++++..+++.|.+.+.++ ++.||+||+||
T Consensus 61 ~~~--------------~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~i~~~~~~~~~v~~~~g-----~~~~d~vVlAt 119 (332)
T 3lzw_A 61 FPK--------------IRAQELINNLKEQMAKFDQT--ICLEQAVESVEKQADGVFKLVTNEE-----THYSKTVIITA 119 (332)
T ss_dssp CSS--------------EEHHHHHHHHHHHHTTSCCE--EECSCCEEEEEECTTSCEEEEESSE-----EEEEEEEEECC
T ss_pred CCC--------------CCHHHHHHHHHHHHHHhCCc--EEccCEEEEEEECCCCcEEEEECCC-----EEEeCEEEECC
Confidence 111 12388999999999888888 8999999999987634899988775 58999999999
Q ss_pred CCCC-CcccCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC----cccccc
Q 018550 163 GHFS-VPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA----DETHEK 237 (354)
Q Consensus 163 G~~s-~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~----~~~~~~ 237 (354)
|..+ .|+.|.++|...+.+..++. .+.+.....+++++|||+|.+|+|+|..|++.+.+|+++++.+. +...++
T Consensus 120 G~~~~~p~~~~~~g~~~~~g~~~~~-~~~~~~~~~~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~ 198 (332)
T 3lzw_A 120 GNGAFKPRKLELENAEQYEGKNLHY-FVDDLQKFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRAHEHSVEN 198 (332)
T ss_dssp TTSCCEECCCCCTTGGGGBTTTEES-SCSCGGGGBTCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSSCHHHHHH
T ss_pred CCCcCCCCCCCCCChhhccCceEEE-ecCCHHHcCCCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCccHHHHHH
Confidence 9432 78888999988766555655 55555555789999999999999999999999999999999875 222333
Q ss_pred CCCCC-CeEEecceeEEecCCc---EEEcc-----CcEEecCEEEEcccCCCccCcccccCchhhh--------------
Q 018550 238 QPGYD-NMWLHSMVERANEDGT---VVFRN-----GRVVSADVIMHCTGLTGTSTTTLFLKPMALL-------------- 294 (354)
Q Consensus 238 l~~~~-~~~~~~~v~~v~~~~~---v~~~~-----g~~~~~D~vi~a~G~~~~~p~~~~l~~~~~~-------------- 294 (354)
+.+.+ +++.++.++++..++. |++.+ ++++++|.|++|+|+. |+.+++...+..
T Consensus 199 l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~---p~~~~~~~~~~~~~~g~i~vd~~~~t 275 (332)
T 3lzw_A 199 LHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIVNYGFV---SSLGPIKNWGLDIEKNSIVVKSTMET 275 (332)
T ss_dssp HHHSSCEEETTEEEEEEECSSSCCEEEEEETTSCCEEEEECSEEEECCCEE---CCCGGGGGSSCCEETTEEECCTTSBC
T ss_pred HhcCCeEEEeCceeeEEecCCceEEEEEEecCCCceEEEECCEEEEeeccC---CCchHHhhcCccccCCeEEeCCCCce
Confidence 44444 8888899999986543 77766 3678999999999999 777776554322
Q ss_pred -hceeeeecccc
Q 018550 295 -LWMTIVLGHCT 305 (354)
Q Consensus 295 -~~~i~a~GD~~ 305 (354)
..+|||+|||+
T Consensus 276 ~~~~vya~GD~~ 287 (332)
T 3lzw_A 276 NIEGFFAAGDIC 287 (332)
T ss_dssp SSTTEEECGGGE
T ss_pred ecCCEEEcccee
Confidence 24599999997
No 7
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=3.1e-33 Score=248.84 Aligned_cols=267 Identities=18% Similarity=0.221 Sum_probs=193.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
+++|+|||||++|+++|..|++.|++|+|||+++.+||.|... .|.+. .+...
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~----------~~~~~-----------------~~~~~ 57 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTAL----------YPEKY-----------------IYDVA 57 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHT----------CTTSE-----------------ECCST
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeecc----------CCCce-----------------eeccC
Confidence 3689999999999999999999999999999998899888652 00000 00011
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEe
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlA 161 (354)
.++. ....++.+++.+.+.+++++ ++++++|++++.++ +.|.+.+.++. ++.||+||+|
T Consensus 58 ~~~~--------------~~~~~~~~~l~~~~~~~~~~--~~~~~~v~~i~~~~-~~~~v~~~~g~----~~~~~~lv~A 116 (335)
T 2zbw_A 58 GFPK--------------VYAKDLVKGLVEQVAPFNPV--YSLGERAETLEREG-DLFKVTTSQGN----AYTAKAVIIA 116 (335)
T ss_dssp TCSS--------------EEHHHHHHHHHHHHGGGCCE--EEESCCEEEEEEET-TEEEEEETTSC----EEEEEEEEEC
T ss_pred CCCC--------------CCHHHHHHHHHHHHHHcCCE--EEeCCEEEEEEECC-CEEEEEECCCC----EEEeCEEEEC
Confidence 1111 12377888888888888887 88899999999876 57888876654 7899999999
Q ss_pred eCCCC-CcccCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC--------c
Q 018550 162 NGHFS-VPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA--------D 232 (354)
Q Consensus 162 tG~~s-~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~--------~ 232 (354)
||..+ .|+.|+++|...+.+..++.. +.+.....+++++|||+|.+|+|+|..|++.+.+|+++.+++. +
T Consensus 117 tG~~~~~p~~~~i~g~~~~~~~~~~~~-~~~~~~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~~~~~~~ 195 (335)
T 2zbw_A 117 AGVGAFEPRRIGAPGEREFEGRGVYYA-VKSKAEFQGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRAHEASVK 195 (335)
T ss_dssp CTTSEEEECCCCCTTTTTTBTTTEESS-CSCGGGGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCSCHHHHH
T ss_pred CCCCCCCCCCCCCCChhhccCcEEEEe-cCchhhcCCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCccHHHHH
Confidence 99432 577778888766544333322 2233344689999999999999999999999999999999874 1
Q ss_pred cccccCCCCC-CeEEecceeEEecCCc---EEEc---cC--cEEecCEEEEcccCCCccCcccccCchhhh---------
Q 018550 233 ETHEKQPGYD-NMWLHSMVERANEDGT---VVFR---NG--RVVSADVIMHCTGLTGTSTTTLFLKPMALL--------- 294 (354)
Q Consensus 233 ~~~~~l~~~~-~~~~~~~v~~v~~~~~---v~~~---~g--~~~~~D~vi~a~G~~~~~p~~~~l~~~~~~--------- 294 (354)
...+.+++.+ +++.++.|+++..++. |+++ +| +++++|.||+|+|++ |+++++...+..
T Consensus 196 ~l~~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~---p~~~~l~~~~~~~~~g~i~vd 272 (335)
T 2zbw_A 196 ELMKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVLILAGYI---TKLGPLANWGLALEKNKIKVD 272 (335)
T ss_dssp HHHHHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEE---EECGGGGGSCCCEETTEEECC
T ss_pred HHHhccccCCeEEecCCcceeEccCCCeeEEEEEECCCCceEEEecCEEEEeecCC---CCchHhhhcceeccCCeeeeC
Confidence 1222233334 8888889999986543 6666 67 578999999999999 776666543321
Q ss_pred ------hceeeeecccchh---------hHHHHHHHhhhcc
Q 018550 295 ------LWMTIVLGHCTST---------FFRQSWHQAFHLL 320 (354)
Q Consensus 295 ------~~~i~a~GD~~~~---------~~~~~~~~~~~~~ 320 (354)
..+|||+|||+.. ...|+...+.++.
T Consensus 273 ~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~ 313 (335)
T 2zbw_A 273 TTMATSIPGVYACGDIVTYPGKLPLIVLGFGEAAIAANHAA 313 (335)
T ss_dssp TTCBCSSTTEEECSTTEECTTCCCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCEEEeccccccCcchhhhhhhHHHHHHHHHHHH
Confidence 2459999999841 2345555555553
No 8
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=2.2e-33 Score=245.40 Aligned_cols=244 Identities=14% Similarity=0.181 Sum_probs=184.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhccccccccc
Q 018550 1 MFRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGF 80 (354)
Q Consensus 1 ~~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (354)
|+++|+|||||++|+++|..|++.|++|+|||+++..+..+... ..+
T Consensus 1 m~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~---------------------------------~~~ 47 (297)
T 3fbs_A 1 MKFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHS---------------------------------HGF 47 (297)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCC---------------------------------CSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhh---------------------------------cCC
Confidence 77899999999999999999999999999999965332211110 001
Q ss_pred cCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHh-CCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEE
Q 018550 81 QAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREF-GVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVV 159 (354)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vI 159 (354)
... ......++.+++.+.+.++ ++. +. +.+|++++.++ +.|.+.+.++. ++.||+||
T Consensus 48 ~~~--------------~~~~~~~~~~~~~~~~~~~~~v~--~~-~~~v~~i~~~~-~~~~v~~~~g~----~~~~d~vv 105 (297)
T 3fbs_A 48 LGQ--------------DGKAPGEIIAEARRQIERYPTIH--WV-EGRVTDAKGSF-GEFIVEIDGGR----RETAGRLI 105 (297)
T ss_dssp TTC--------------TTCCHHHHHHHHHHHHTTCTTEE--EE-ESCEEEEEEET-TEEEEEETTSC----EEEEEEEE
T ss_pred cCC--------------CCCCHHHHHHHHHHHHHhcCCeE--EE-EeEEEEEEEcC-CeEEEEECCCC----EEEcCEEE
Confidence 111 1223378888998888876 444 43 56999999887 77999988764 79999999
Q ss_pred EeeCCCCCcccCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC---ccccc
Q 018550 160 VCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA---DETHE 236 (354)
Q Consensus 160 lAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~---~~~~~ 236 (354)
+||| +.|+.|.++|...+.+...+...+.+.....+++++|||+|++|+|+|..|++.| +|+++.+.+. +...+
T Consensus 106 iAtG--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~~~~~~~~~ 182 (297)
T 3fbs_A 106 LAMG--VTDELPEIAGLRERWGSAVFHCPYCHGYELDQGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIVEPDADQHA 182 (297)
T ss_dssp ECCC--CEEECCCCBTTGGGBTTTEESCHHHHTGGGTTCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTCCCCHHHHH
T ss_pred ECCC--CCCCCCCCCCchhhcCCeeEEcccCcchhhcCCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCCCCCHHHHH
Confidence 9999 7888899999877655555554444444557899999999999999999999998 9999998764 22233
Q ss_pred cCCCCC-CeEEecceeEEecCCcEEEccCcEEecCEEEEcccCCCccCcccccCchhhh-------------------hc
Q 018550 237 KQPGYD-NMWLHSMVERANEDGTVVFRNGRVVSADVIMHCTGLTGTSTTTLFLKPMALL-------------------LW 296 (354)
Q Consensus 237 ~l~~~~-~~~~~~~v~~v~~~~~v~~~~g~~~~~D~vi~a~G~~~~~p~~~~l~~~~~~-------------------~~ 296 (354)
.+.+.+ +++ .+.|+++..++.|++.+|+++++|.|++|+|+. |+.++++..+.. ..
T Consensus 183 ~l~~~gv~i~-~~~v~~i~~~~~v~~~~g~~~~~D~vi~a~G~~---p~~~~~~~~g~~~~~~~~G~~i~vd~~~~t~~~ 258 (297)
T 3fbs_A 183 LLAARGVRVE-TTRIREIAGHADVVLADGRSIALAGLFTQPKLR---ITVDWIEKLGCAVEEGPMGSTIVTDPMKQTTAR 258 (297)
T ss_dssp HHHHTTCEEE-CSCEEEEETTEEEEETTSCEEEESEEEECCEEE---CCCSCHHHHTCCEEEETTEEEECCCTTCBCSST
T ss_pred HHHHCCcEEE-cceeeeeecCCeEEeCCCCEEEEEEEEEccCcc---cCchhHHhcCCccccCCCCceEEeCCCCccCCC
Confidence 344444 666 489999987645999999999999999999999 666665543221 13
Q ss_pred eeeeecccch
Q 018550 297 MTIVLGHCTS 306 (354)
Q Consensus 297 ~i~a~GD~~~ 306 (354)
+|||+|||+.
T Consensus 259 ~vya~GD~~~ 268 (297)
T 3fbs_A 259 GIFACGDVAR 268 (297)
T ss_dssp TEEECSGGGC
T ss_pred CEEEEeecCC
Confidence 5999999998
No 9
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=100.00 E-value=1.2e-32 Score=258.59 Aligned_cols=203 Identities=28% Similarity=0.422 Sum_probs=159.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||||++|+++|..|++.|++|+|||+++.+||+|..+ +.| ......+...+.+.
T Consensus 9 ~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~---------~yP-----------g~~~d~~~~~y~~~ 68 (545)
T 3uox_A 9 ALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWN---------RYP-----------GCRLDTESYAYGYF 68 (545)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHC---------CCT-----------TCBCSSCHHHHCHH
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccC---------CCC-----------ceeecCchhhcccc
Confidence 3689999999999999999999999999999999999999763 122 12222222222211
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCC-CcEEEEEeecCCceEEEEeCEEEE
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVES-NKWKVKSRKKDDVVEEETFDAVVV 160 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~-~~~~v~~~~g~~~~~~~~~d~vIl 160 (354)
-.+ .......+...|+...++.+|+.+.++++++..+++++++|++++++++ +.|+|++.+|. ++.||+||+
T Consensus 69 f~~---~~~~~~~~~~~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~----~~~ad~lV~ 141 (545)
T 3uox_A 69 ALK---GIIPEWEWSENFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEE----VVTCRFLIS 141 (545)
T ss_dssp HHT---TSSTTCCCSBSSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTE----EEEEEEEEE
T ss_pred cCc---ccccCCCccccCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCC----EEEeCEEEE
Confidence 000 0000112445677889999999999999998655999999999998753 57999988764 899999999
Q ss_pred eeCCCCCcccCCCCCCCCCCcceeecccCCCC-------CCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC
Q 018550 161 CNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIP-------NPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA 231 (354)
Q Consensus 161 AtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~-------~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~ 231 (354)
|||.++.|+.|+++|.+.+.+..+++..+... ....+++|+|||+|.+|+|+|..|++.+++|+++.|++.
T Consensus 142 AtG~~s~p~~p~ipG~~~f~g~~~h~~~~~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 142 ATGPLSASRMPDIKGIDSFKGESFHSSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp CCCSCBC---CCCTTGGGCCSEEEEGGGCCBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CcCCCCCCcCCCCCCccccCCCeEEcccccccccccccccccCCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 99998899999999999988888998877665 566889999999999999999999999999999999874
No 10
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=100.00 E-value=1.2e-32 Score=258.79 Aligned_cols=203 Identities=27% Similarity=0.424 Sum_probs=162.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||||++|+++|..|++.|++|+|||+++.+||+|..+. |+.+....+...+.+.
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~--------------------ypg~~~dv~s~~y~~~ 80 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNR--------------------YPGARCDVESIDYSYS 80 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCC--------------------CTTCBCSSCTTTSSCC
T ss_pred CCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCC--------------------CCCceeCCCchhcccc
Confidence 36899999999999999999999999999999999999998641 1112122222221111
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCC-CcEEEEEeecCCceEEEEeCEEEE
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVES-NKWKVKSRKKDDVVEEETFDAVVV 160 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~-~~~~v~~~~g~~~~~~~~~d~vIl 160 (354)
+.........+...|+...++.+|+.+.++++++..+++++++|++++++++ +.|+|++.+|. ++.||+||+
T Consensus 81 ---f~~~~~~~~~~~~~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~----~i~ad~lV~ 153 (549)
T 4ap3_A 81 ---FSPELEQEWNWSEKYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGD----EVSARFLVV 153 (549)
T ss_dssp ---SCHHHHHHCCCSSSSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCC----EEEEEEEEE
T ss_pred ---cccccccCCCCccCCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCC----EEEeCEEEE
Confidence 1000000012344677889999999999999998555999999999998763 47999988775 799999999
Q ss_pred eeCCCCCcccCCCCCCCCCCcceeecccCC-CCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC
Q 018550 161 CNGHFSVPRLAQVPGIDSWPGKQMHSHNYR-IPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA 231 (354)
Q Consensus 161 AtG~~s~~~~p~~~g~~~~~~~~~~~~~~~-~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~ 231 (354)
|||.++.|+.|+++|.+.+.+..+++..+. +.....+++|+|||+|.+|+|+|..|++.+++|+++.|++.
T Consensus 154 AtG~~s~p~~p~ipG~~~f~g~~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 154 AAGPLSNANTPAFDGLDRFTGDIVHTARWPHDGVDFTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp CCCSEEECCCCCCTTGGGCCSEEEEGGGCCTTCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CcCCCCCCCCCCCCCcccCCCceEEeccccccccccCCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 999888999999999999988999988887 56667899999999999999999999999999999999874
No 11
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=100.00 E-value=3.9e-32 Score=240.72 Aligned_cols=248 Identities=23% Similarity=0.295 Sum_probs=185.4
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhccccccccccC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (354)
++|+|||||++|+++|..|++.|++|+|||++ .+||.|....... .++.
T Consensus 9 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~~~------------------------------~~~~ 57 (325)
T 2q7v_A 9 YDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAWSEEVE------------------------------NFPG 57 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGCSCBC------------------------------CSTT
T ss_pred CCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCcccccccccc------------------------------cCCC
Confidence 68999999999999999999999999999997 7888887631100 0001
Q ss_pred CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEe--CCCcEEEEEeecCCceEEEEeCEEEE
Q 018550 83 YPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLV--ESNKWKVKSRKKDDVVEEETFDAVVV 160 (354)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~--~~~~~~v~~~~g~~~~~~~~~d~vIl 160 (354)
++. ...+.++.+++.+.+.+++++ ++. .+|.+++.. ++..|.+.+.++. ++.||+||+
T Consensus 58 ~~~-------------~~~~~~~~~~l~~~~~~~gv~--~~~-~~v~~i~~~~~~~~~~~v~~~~g~----~~~~~~vv~ 117 (325)
T 2q7v_A 58 FPE-------------PIAGMELAQRMHQQAEKFGAK--VEM-DEVQGVQHDATSHPYPFTVRGYNG----EYRAKAVIL 117 (325)
T ss_dssp CSS-------------CBCHHHHHHHHHHHHHHTTCE--EEE-CCEEEEEECTTSSSCCEEEEESSC----EEEEEEEEE
T ss_pred CCC-------------CCCHHHHHHHHHHHHHHcCCE--EEe-eeEEEEEeccCCCceEEEEECCCC----EEEeCEEEE
Confidence 110 123478889999999999988 766 689999886 4122788777664 899999999
Q ss_pred eeCCCCCcccCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC----ccccc
Q 018550 161 CNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA----DETHE 236 (354)
Q Consensus 161 AtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~----~~~~~ 236 (354)
||| +.++.|.++|...+.+..++...+.+.....+++++|||+|.+|+|+|..|++.+.+|+++++++. +...+
T Consensus 118 AtG--~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~ 195 (325)
T 2q7v_A 118 ATG--ADPRKLGIPGEDNFWGKGVSTCATCDGFFYKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRANKVAQA 195 (325)
T ss_dssp CCC--EEECCCCCTTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCSCHHHHH
T ss_pred CcC--CCcCCCCCCChhhccCceEEEeccCCHHHcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCcchHHHH
Confidence 999 778888898887654444544333333344679999999999999999999999999999999864 22233
Q ss_pred cCC-CCC-CeEEecceeEEecCCc---EEEc---cCc--EEecCEEEEcccCCCccCcccccCchhh-------------
Q 018550 237 KQP-GYD-NMWLHSMVERANEDGT---VVFR---NGR--VVSADVIMHCTGLTGTSTTTLFLKPMAL------------- 293 (354)
Q Consensus 237 ~l~-~~~-~~~~~~~v~~v~~~~~---v~~~---~g~--~~~~D~vi~a~G~~~~~p~~~~l~~~~~------------- 293 (354)
++. ..+ +++.++.++++..++. |+++ +|+ ++++|.||+|+|++ |+++++.....
T Consensus 196 ~l~~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~---p~~~~l~~~~~~~~~g~i~vd~~~ 272 (325)
T 2q7v_A 196 RAFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDGVFIFIGHV---PNTAFVKDTVSLRDDGYVDVRDEI 272 (325)
T ss_dssp HHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECSCEE---ESCGGGTTTSCBCTTSCBCCBTTT
T ss_pred HHHhcCCceEecCCceEEEccCCcEEEEEEEECCCCcEEEEEcCEEEEccCCC---CChHHHhhhcccCCCccEecCCCC
Confidence 343 334 8888999999987642 6665 564 78999999999999 77777654310
Q ss_pred --hhceeeeecccch
Q 018550 294 --LLWMTIVLGHCTS 306 (354)
Q Consensus 294 --~~~~i~a~GD~~~ 306 (354)
...+|||+|||+.
T Consensus 273 ~t~~~~vya~GD~~~ 287 (325)
T 2q7v_A 273 YTNIPMLFAAGDVSD 287 (325)
T ss_dssp BCSSTTEEECSTTTC
T ss_pred ccCCCCEEEeecccC
Confidence 1235999999986
No 12
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=100.00 E-value=1.5e-33 Score=263.00 Aligned_cols=309 Identities=13% Similarity=0.104 Sum_probs=199.5
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeC--------CCccceeecCCCCCCCCCCCCCCCCccccccccc-chhcc
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKG--------EQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKS-LRVNL 73 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~--------~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 73 (354)
|||+|||+||+|+.+|..++++|.+|.|||+. ..+||+|.+ +||+|.|.++.+..... +....
T Consensus 43 YDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln--------~GCIPsK~L~~aa~~~~~~~~~~ 114 (542)
T 4b1b_A 43 YDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVN--------VGCVPKKLMHYAGHMGSIFKLDS 114 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHH--------HSHHHHHHHHHHHHHHHHHHHTG
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccc--------cchHHHHHHHHHHHHHHHHHhhh
Confidence 79999999999999999999999999999964 348999998 49999987776543322 22222
Q ss_pred ccccccccCCCCCccCCCCCCCCCCCCCHHHHHHHHHH-----------HHHHhCCcceEEeceEEEEEEEeCCCcEEEE
Q 018550 74 PRELMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQN-----------FAREFGVDQVVRLHTEVLNARLVESNKWKVK 142 (354)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----------~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~ 142 (354)
......+.... .++..+.++.+. .+++.+++ +.. ....-+. . +...+.
T Consensus 115 ~~~Gi~~~~~~---------------~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~--~i~-G~a~f~~--~-~~v~V~ 173 (542)
T 4b1b_A 115 KAYGWKFDNLK---------------HDWKKLVTTVQSHIRSLNFSYMTGLRSSKVK--YIN-GLAKLKD--K-NTVSYY 173 (542)
T ss_dssp GGGTEEEEEEE---------------ECHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEC-EEEEEEE--T-TEEEEE
T ss_pred HhcCcccCccc---------------ccHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEe-eeEEEcC--C-CcceEe
Confidence 11111111100 012333333332 23344665 433 2222221 2 444454
Q ss_pred EeecCCceEEEEeCEEEEeeCCCCCcccCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCCE
Q 018550 143 SRKKDDVVEEETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKE 222 (354)
Q Consensus 143 ~~~g~~~~~~~~~d~vIlAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~ 222 (354)
..+..+..+.+.++++|+||| ++|+.|+..+... ...+++....... ..|++++|||||++|+|+|..+++.|.+
T Consensus 174 ~~~~~~~~~~i~a~~iiIATG--s~P~~P~~~~~~~--~~~~ts~~~l~l~-~lP~~lvIIGgG~IGlE~A~~~~~lG~~ 248 (542)
T 4b1b_A 174 LKGDLSKEETVTGKYILIATG--CRPHIPDDVEGAK--ELSITSDDIFSLK-KDPGKTLVVGASYVALECSGFLNSLGYD 248 (542)
T ss_dssp EC--CCCEEEEEEEEEEECCC--EEECCCSSSBTHH--HHCBCHHHHTTCS-SCCCSEEEECCSHHHHHHHHHHHHHTCC
T ss_pred ecccCCceEEEeeeeEEeccC--CCCCCCCcccCCC--ccccCchhhhccc-cCCceEEEECCCHHHHHHHHHHHhcCCe
Confidence 443333456899999999999 8999886443321 1223333333322 3579999999999999999999999999
Q ss_pred EEEEEecCC----c-----cccccCCCCC-CeEEecceeEEecCCc---EEEccCcEEecCEEEEcccCCCccCcccccC
Q 018550 223 VHIASRSVA----D-----ETHEKQPGYD-NMWLHSMVERANEDGT---VVFRNGRVVSADVIMHCTGLTGTSTTTLFLK 289 (354)
Q Consensus 223 v~~~~r~~~----~-----~~~~~l~~~~-~~~~~~~v~~v~~~~~---v~~~~g~~~~~D~vi~a~G~~~~~p~~~~l~ 289 (354)
||++.++.. + ...+.|++.+ +++.+..++.+...+. |.+.++.++.+|.|++|+|++ ||++.|.
T Consensus 249 VTii~~~~~L~~~D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~---Pnt~~L~ 325 (542)
T 4b1b_A 249 VTVAVRSIVLRGFDQQCAVKVKLYMEEQGVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGRK---GDIDGLN 325 (542)
T ss_dssp EEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEE---ESCGGGC
T ss_pred EEEecccccccccchhHHHHHHHHHHhhcceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEccccc---CCccccC
Confidence 999987553 1 1223344455 8889999999875443 666788889999999999999 8887764
Q ss_pred chhh--h-----------------hceeeeecccchh-------hHHHHHHHhhhccCCCcccccCCCCCccccCCchhh
Q 018550 290 PMAL--L-----------------LWMTIVLGHCTST-------FFRQSWHQAFHLLGYHRRLSLSPSLNSRASGLPVFC 343 (354)
Q Consensus 290 ~~~~--~-----------------~~~i~a~GD~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (354)
-... . ..+|||+|||+.. ...+....+.++.+..... ...+.++..++|
T Consensus 326 le~~gv~~~~~~~~i~vd~~~~Ts~p~IyAiGDv~~~~p~La~~A~~eg~~aa~~i~g~~~~~-----~d~~~iP~~vft 400 (542)
T 4b1b_A 326 LESLNMNVNKSNNKIIADHLSCTNIPSIFAVGDVAENVPELAPVAIKAGEILARRLFKDSDEI-----MDYSYIPTSIYT 400 (542)
T ss_dssp GGGTTCCEETTTTEECCCTTSBCSSTTEEECTTSBTTCCCCHHHHHHHHHHHHHHHHSCCCCC-----CCCSSCCEEECS
T ss_pred cccceeeecccCceEeccccccccCCCeEEeccccCCchhHHHHHHHHHHHHHHHHhcCCCcc-----cCCCCCceEEeC
Confidence 2211 1 1239999999853 2355666677776655431 222334445777
Q ss_pred hhhhhhhccc
Q 018550 344 LVELCFLHKT 353 (354)
Q Consensus 344 ~~~~~~~~~~ 353 (354)
.||+...+.|
T Consensus 401 ~PeiA~VGlT 410 (542)
T 4b1b_A 401 PIEYGACGYS 410 (542)
T ss_dssp SSCEEEEECC
T ss_pred CCCeEEEeCC
Confidence 7777766654
No 13
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=100.00 E-value=3e-32 Score=244.88 Aligned_cols=268 Identities=20% Similarity=0.260 Sum_probs=193.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
+++|+|||||++|+++|..|++.|++|+|||+.+.+||.|.... |.. ..+..+
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~----------~~~-----------------~~~~~~ 66 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALY----------PEK-----------------HIYDVA 66 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTC----------TTS-----------------EECCST
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccccC----------CCc-----------------ccccCC
Confidence 36899999999999999999999999999999988998886420 000 000011
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEe
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlA 161 (354)
.++. ....++.+++.+.+.+++++ ++++++|++++..+++.|.+.+.++. ++.||+||+|
T Consensus 67 ~~~~--------------~~~~~~~~~l~~~~~~~~~~--~~~~~~v~~i~~~~~~~~~v~~~~g~----~~~~~~li~A 126 (360)
T 3ab1_A 67 GFPE--------------VPAIDLVESLWAQAERYNPD--VVLNETVTKYTKLDDGTFETRTNTGN----VYRSRAVLIA 126 (360)
T ss_dssp TCSS--------------EEHHHHHHHHHHHHHTTCCE--EECSCCEEEEEECTTSCEEEEETTSC----EEEEEEEEEC
T ss_pred CCCC--------------CCHHHHHHHHHHHHHHhCCE--EEcCCEEEEEEECCCceEEEEECCCc----EEEeeEEEEc
Confidence 1111 12377888888888888887 88999999999876347888887664 7999999999
Q ss_pred eCCCC-CcccCCCCC-CCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC----cccc
Q 018550 162 NGHFS-VPRLAQVPG-IDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA----DETH 235 (354)
Q Consensus 162 tG~~s-~~~~p~~~g-~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~----~~~~ 235 (354)
||..+ .|+.|.++| .+.+.+..++.. +.+.....+++++|||+|.+|+|+|..|++.+.+|+++++++. +...
T Consensus 127 tG~~~~~~~~~~i~g~~~~~~~~~v~~~-~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~~ 205 (360)
T 3ab1_A 127 AGLGAFEPRKLPQLGNIDHLTGSSVYYA-VKSVEDFKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGHGKTA 205 (360)
T ss_dssp CTTCSCCBCCCGGGCCCTTTBTTTEESS-CSCGGGGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSSCSHHH
T ss_pred cCCCcCCCCCCCCCCchhhCcCceEEEe-cCCHHHcCCCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCCCHHHH
Confidence 99543 577777888 655544333322 2333345689999999999999999999999999999999764 1122
Q ss_pred ccC----CCCC-CeEEecceeEEecC-C---cEEEc--cC--cEEecCEEEEcccCCCccCcccccCchhhh--------
Q 018550 236 EKQ----PGYD-NMWLHSMVERANED-G---TVVFR--NG--RVVSADVIMHCTGLTGTSTTTLFLKPMALL-------- 294 (354)
Q Consensus 236 ~~l----~~~~-~~~~~~~v~~v~~~-~---~v~~~--~g--~~~~~D~vi~a~G~~~~~p~~~~l~~~~~~-------- 294 (354)
+.+ .+.+ +++.++.|+++..+ + .|++. +| .++++|.||+|+|+. |+.++++..+..
T Consensus 206 ~~l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~---p~~~~l~~~~~~~~~g~i~v 282 (360)
T 3ab1_A 206 HEVERARANGTIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIGFK---SNLGPLARWDLELYENALVV 282 (360)
T ss_dssp HSSHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECCCBC---CSCGGGGGSSCCEETTEEEC
T ss_pred HHHHHHhhcCceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECCCCC---CCHHHHHhhccccccCeeee
Confidence 222 2233 78888899999854 3 26664 77 578999999999999 777666543321
Q ss_pred -------hceeeeecccchh---------hHHHHHHHhhhcc
Q 018550 295 -------LWMTIVLGHCTST---------FFRQSWHQAFHLL 320 (354)
Q Consensus 295 -------~~~i~a~GD~~~~---------~~~~~~~~~~~~~ 320 (354)
..+|||+|||+.. ...|+...|.++.
T Consensus 283 d~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~ 324 (360)
T 3ab1_A 283 DSHMKTSVDGLYAAGDIAYYPGKLKIIQTGLSEATMAVRHSL 324 (360)
T ss_dssp CTTSBCSSTTEEECSTTEECTTCCCSHHHHHHHHHHHHHHHH
T ss_pred cCCCcCCCCCEEEecCccCCCCccceeehhHHHHHHHHHHHH
Confidence 2359999999851 2345555555553
No 14
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.9e-32 Score=241.24 Aligned_cols=247 Identities=19% Similarity=0.228 Sum_probs=167.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.|||+||||||||++||..|+++|++|+|||++ .+||+|.+. +|.+. ++
T Consensus 6 ~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~-~~gG~~~~~--------~~i~~----------------------~p 54 (312)
T 4gcm_A 6 DFDIAIIGAGPAGMTAAVYASRANLKTVMIERG-IPGGQMANT--------EEVEN----------------------FP 54 (312)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGC--------SCBCC----------------------ST
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC-CCCCeeecc--------cccCC----------------------cC
Confidence 489999999999999999999999999999985 789988764 22211 11
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEe
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlA 161 (354)
.++.. ...++.........+.... +..+..+..... ........++ .++.||+||+|
T Consensus 55 ~~~~~--------------~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~~~~----~~~~~d~liiA 111 (312)
T 4gcm_A 55 GFEMI--------------TGPDLSTKMFEHAKKFGAV--YQYGDIKSVEDK---GEYKVINFGN----KELTAKAVIIA 111 (312)
T ss_dssp TCSSB--------------CHHHHHHHHHHHHHHTTCE--EEECCCCEEEEC---SSCEEEECSS----CEEEEEEEEEC
T ss_pred Ccccc--------------chHHHHHHHHHHHhhcccc--ccceeeeeeeee---ecceeeccCC----eEEEeceeEEc
Confidence 11111 2266777777777776665 555444444332 2223333333 38999999999
Q ss_pred eCCCCCcccCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCCc-----cccc
Q 018550 162 NGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVAD-----ETHE 236 (354)
Q Consensus 162 tG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~~-----~~~~ 236 (354)
|| +.|+.|++||.+.+.+..++.....+....++++++|||+|++|+|+|..|++.|.+||+++|++.- ....
T Consensus 112 tG--s~~~~~~ipG~~~~~~~~v~~~~~~~~~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~ 189 (312)
T 4gcm_A 112 TG--AEYKKIGVPGEQELGGRGVSYCAVCDGAFFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRAQRILQDR 189 (312)
T ss_dssp CC--EEECCCCCTTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCSCHHHHHH
T ss_pred cc--CccCcCCCCChhhhCCccEEeeeccCccccCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEecccccCcchhHHHH
Confidence 99 8999999999887766666655444445567899999999999999999999999999999998741 0111
Q ss_pred cCCCCC-CeEEecceeEEecCC-c-----EE-Ecc--CcEEecCEEEEcccCCCccCcccccCchhhh------------
Q 018550 237 KQPGYD-NMWLHSMVERANEDG-T-----VV-FRN--GRVVSADVIMHCTGLTGTSTTTLFLKPMALL------------ 294 (354)
Q Consensus 237 ~l~~~~-~~~~~~~v~~v~~~~-~-----v~-~~~--g~~~~~D~vi~a~G~~~~~p~~~~l~~~~~~------------ 294 (354)
.+.... .......+....... . .. ..+ +..+++|.|++++|.. |++.++...+..
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~---~~~~~~~~~g~~~~~G~I~vd~~~ 266 (312)
T 4gcm_A 190 AFKNDKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGMK---PLTAPFKDLGITNDVGYIVTKDDM 266 (312)
T ss_dssp HHHCTTEEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEE---ESCGGGGGGTCBCTTSCBCCCTTS
T ss_pred HHHhcCcceeeecceeeeeccccccccceeeeecCCceeEEeeeeEEeecCCC---cCchhHHhcceecCCCeEeeCCCC
Confidence 111222 233333333332111 1 11 112 2578999999999999 777776554432
Q ss_pred ---hceeeeecccchh
Q 018550 295 ---LWMTIVLGHCTST 307 (354)
Q Consensus 295 ---~~~i~a~GD~~~~ 307 (354)
..+|||+|||+..
T Consensus 267 ~Ts~pgIyA~GDv~~~ 282 (312)
T 4gcm_A 267 TTSVPGIFAAGDVRDK 282 (312)
T ss_dssp BCSSTTEEECSTTBSC
T ss_pred ccCCCCEEEEeecCCC
Confidence 1349999999863
No 15
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.98 E-value=6.8e-33 Score=246.81 Aligned_cols=252 Identities=18% Similarity=0.265 Sum_probs=186.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC----CccceeecCCCCCCCCCCCCCCCCcccccccccchhccccc
Q 018550 1 MFRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE----QVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRE 76 (354)
Q Consensus 1 ~~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~----~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (354)
|+++|+|||||++|+++|..|++.|++|+|||+.+ .+||.|.....
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~------------------------------ 70 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTE------------------------------ 70 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSE------------------------------
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchh------------------------------
Confidence 35799999999999999999999999999999943 67777765210
Q ss_pred cccccCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeC
Q 018550 77 LMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFD 156 (354)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d 156 (354)
...++.++ .+....++..++.+.+.+++++ +++++ |++++.++ +.|.+.+.... ....+.+|
T Consensus 71 ~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~gv~--i~~~~-v~~i~~~~-~~~~v~~~~~~-~~~~~~~d 132 (338)
T 3itj_A 71 IENFPGFP-------------DGLTGSELMDRMREQSTKFGTE--IITET-VSKVDLSS-KPFKLWTEFNE-DAEPVTTD 132 (338)
T ss_dssp ECCSTTCT-------------TCEEHHHHHHHHHHHHHHTTCE--EECSC-EEEEECSS-SSEEEEETTCS-SSCCEEEE
T ss_pred hcccCCCc-------------ccCCHHHHHHHHHHHHHHcCCE--EEEeE-EEEEEEcC-CEEEEEEEecC-CCcEEEeC
Confidence 00011111 1123478999999999999998 88887 99998876 77888774211 01378999
Q ss_pred EEEEeeCCCCCcccCCCCCCCCCCcceeecccCCCCC--CCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC---
Q 018550 157 AVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPN--PFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA--- 231 (354)
Q Consensus 157 ~vIlAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~--~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~--- 231 (354)
+||+|+| +.++.|.++|...+....++.....+.. ...+++++|||+|.+|+|+|..|++.+.+|+++++.+.
T Consensus 133 ~vvlAtG--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~ 210 (338)
T 3itj_A 133 AIILATG--ASAKRMHLPGEETYWQKGISACAVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA 210 (338)
T ss_dssp EEEECCC--EEECCCCCTTHHHHBTTTEESCHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS
T ss_pred EEEECcC--CCcCCCCCCCchhccCccEEEchhcccchhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC
Confidence 9999999 7888888888765433444443332222 44689999999999999999999999999999999875
Q ss_pred -ccccccCCCC-C-CeEEecceeEEecCCc----EEEcc-----CcEEecCEEEEcccCCCccCcccccCchhhh-----
Q 018550 232 -DETHEKQPGY-D-NMWLHSMVERANEDGT----VVFRN-----GRVVSADVIMHCTGLTGTSTTTLFLKPMALL----- 294 (354)
Q Consensus 232 -~~~~~~l~~~-~-~~~~~~~v~~v~~~~~----v~~~~-----g~~~~~D~vi~a~G~~~~~p~~~~l~~~~~~----- 294 (354)
....+++.+. + +++.++.|+++..++. |++.+ +.++++|.||+|+|+. |+.+++.. +..
T Consensus 211 ~~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~---p~~~~~~~-~l~~~~~G 286 (338)
T 3itj_A 211 STIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHT---PATKIVAG-QVDTDEAG 286 (338)
T ss_dssp CHHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCEE---ECCGGGBT-TBCBCTTS
T ss_pred CHHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCCC---CChhHhhC-ceEecCCC
Confidence 2233344333 4 8889999999986653 66766 3679999999999999 66666543 111
Q ss_pred ------------hceeeeecccch
Q 018550 295 ------------LWMTIVLGHCTS 306 (354)
Q Consensus 295 ------------~~~i~a~GD~~~ 306 (354)
..+|||+|||+.
T Consensus 287 ~i~v~~~~~~t~~~~vya~GD~~~ 310 (338)
T 3itj_A 287 YIKTVPGSSLTSVPGFFAAGDVQD 310 (338)
T ss_dssp CBCCCTTSSBCSSTTEEECGGGGC
T ss_pred cEEEcCcccccCCCCEEEeeccCC
Confidence 134999999996
No 16
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.98 E-value=1.4e-32 Score=242.46 Aligned_cols=255 Identities=16% Similarity=0.225 Sum_probs=175.2
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhccccccccccC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (354)
+||+||||||||++||..|+++|++|+|||+. ..|+.+.. +|.|.+..++ .++.
T Consensus 5 yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~-~~gg~~~~---------G~~~~~~~i~----------------~~~g 58 (314)
T 4a5l_A 5 HDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGF-MAGGVAAG---------GQLTTTTIIE----------------NFPG 58 (314)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEECCS-SGGGCCTT---------CGGGGSSEEC----------------CSTT
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEecC-CCCCcccC---------CCcCChHHhh----------------hccC
Confidence 79999999999999999999999999999986 45665543 3332211110 0111
Q ss_pred CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEee
Q 018550 83 YPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCN 162 (354)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlAt 162 (354)
++. .....++.+++.+.+.+.+.. +.. ..+....... ..+.+.+.++. ++.||.||+||
T Consensus 59 ~~~-------------~i~~~~l~~~~~~~~~~~~~~--~~~-~~v~~~~~~~-~~~~~~~~~~~----~~~~~~liiAT 117 (314)
T 4a5l_A 59 FPN-------------GIDGNELMMNMRTQSEKYGTT--IIT-ETIDHVDFST-QPFKLFTEEGK----EVLTKSVIIAT 117 (314)
T ss_dssp CTT-------------CEEHHHHHHHHHHHHHHTTCE--EEC-CCEEEEECSS-SSEEEEETTCC----EEEEEEEEECC
T ss_pred Ccc-------------cCCHHHHHHHHHHHHhhcCcE--EEE-eEEEEeecCC-CceEEEECCCe----EEEEeEEEEcc
Confidence 111 112377888888888888887 544 5566665555 56666666554 89999999999
Q ss_pred CCCCCcccCCCCCCCCCCcceeecccCCCC--CCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCCcccc-----
Q 018550 163 GHFSVPRLAQVPGIDSWPGKQMHSHNYRIP--NPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVADETH----- 235 (354)
Q Consensus 163 G~~s~~~~p~~~g~~~~~~~~~~~~~~~~~--~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~~----- 235 (354)
| +.|+.|++||.+.......+.....+. ...++++++|||+|++|+|+|..|++.|++|++++|.+.....
T Consensus 118 G--~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~~~~~~~~~ 195 (314)
T 4a5l_A 118 G--ATAKRMHVPGEDKYWQNGVSACAICDGAVPIFRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRASKTMQE 195 (314)
T ss_dssp C--EEECCCCCTTHHHHBTTTEESCHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCSCHHHHH
T ss_pred c--ccccccCCCccccccccceeeehhhhhhhhhcCCCeEEEECCChHHHHHHHHHHHhCCeeeeecccccccccchhhh
Confidence 9 899999999977543344444333222 2246799999999999999999999999999999987652111
Q ss_pred ccCCCCC-CeEEecceeEEecCCc----EEEc-----cCcEEecCEEEEcccCCCccCcccccCchhhh-----------
Q 018550 236 EKQPGYD-NMWLHSMVERANEDGT----VVFR-----NGRVVSADVIMHCTGLTGTSTTTLFLKPMALL----------- 294 (354)
Q Consensus 236 ~~l~~~~-~~~~~~~v~~v~~~~~----v~~~-----~g~~~~~D~vi~a~G~~~~~p~~~~l~~~~~~----------- 294 (354)
+...... ..+....+.++..... +.+. +++++++|.|++|+|++ ||++++......
T Consensus 196 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~d~vi~a~G~~---pn~~~l~~~~~~~~~G~iv~~~~ 272 (314)
T 4a5l_A 196 RVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSGEYKVVPVAGLFYAIGHS---PNSKFLGGQVKTADDGYILTEGP 272 (314)
T ss_dssp HHHTCTTEEEECSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEE---ESCGGGTTSSCBCTTSCBCCBTT
T ss_pred hhhcccceeeEeeeeeEEEEeeeeccceeEEeecccccceeeccccceEecccc---cChhHhcccceEcCCeeEeCCCC
Confidence 1112222 4555556666653321 3332 24689999999999999 888887543221
Q ss_pred ---hceeeeecccchhhH
Q 018550 295 ---LWMTIVLGHCTSTFF 309 (354)
Q Consensus 295 ---~~~i~a~GD~~~~~~ 309 (354)
..+|||+|||+....
T Consensus 273 ~Ts~pgIyA~GDv~~~~~ 290 (314)
T 4a5l_A 273 KTSVDGVFACGDVCDRVY 290 (314)
T ss_dssp BCSSTTEEECSTTTCSSC
T ss_pred ccCCCCEEEEEeccCCcc
Confidence 234999999997543
No 17
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.98 E-value=5.8e-32 Score=238.97 Aligned_cols=247 Identities=20% Similarity=0.251 Sum_probs=181.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||||++|+++|..|++.|++|+|||+ ..+||.|....... .++
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~~~~~~~~------------------------------~~~ 64 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGFSVAILDK-AVAGGLTAEAPLVE------------------------------NYL 64 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SSTTGGGGGCSCBC------------------------------CBT
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeC-CCCCccccccchhh------------------------------hcC
Confidence 36899999999999999999999999999999 46788776531100 000
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEe
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlA 161 (354)
.+. .....++.+++.+.+.+.+++ +++ .+|.+++..+ +.|.+.+ ++. ++.+|+||+|
T Consensus 65 ~~~--------------~~~~~~~~~~~~~~~~~~~v~--~~~-~~v~~i~~~~-~~~~v~~-~~~----~~~~~~li~A 121 (319)
T 3cty_A 65 GFK--------------SIVGSELAKLFADHAANYAKI--REG-VEVRSIKKTQ-GGFDIET-NDD----TYHAKYVIIT 121 (319)
T ss_dssp TBS--------------SBCHHHHHHHHHHHHHTTSEE--EET-CCEEEEEEET-TEEEEEE-SSS----EEEEEEEEEC
T ss_pred CCc--------------ccCHHHHHHHHHHHHHHcCCE--EEE-eeEEEEEEeC-CEEEEEE-CCC----EEEeCEEEEC
Confidence 100 112367888888888888877 776 7899998876 6677776 332 7899999999
Q ss_pred eCCCCCcccCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC----cccccc
Q 018550 162 NGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA----DETHEK 237 (354)
Q Consensus 162 tG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~----~~~~~~ 237 (354)
+| +.++.|.+++...+.+..++.....+.....+++++|||+|.+|+|+|..|++.+.+|+++++.+. +...++
T Consensus 122 tG--~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~~~~l~~~ 199 (319)
T 3cty_A 122 TG--TTHKHLGVKGESEYFGKGTSYCSTCDGYLFKGKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMCENAYVQE 199 (319)
T ss_dssp CC--EEECCCCCBTTTTTBTTTEESCHHHHGGGGBTSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCSCHHHHHH
T ss_pred CC--CCcccCCCCChHHhCCceEEEEEecchhhcCCCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCCCHHHHHH
Confidence 99 778888888876544333443222222234579999999999999999999999999999998764 122333
Q ss_pred CCCCC-CeEEecceeEEecCC----cEEEc---cCc--EEecCEEEEcccCCCccCcccccCchhhh-------------
Q 018550 238 QPGYD-NMWLHSMVERANEDG----TVVFR---NGR--VVSADVIMHCTGLTGTSTTTLFLKPMALL------------- 294 (354)
Q Consensus 238 l~~~~-~~~~~~~v~~v~~~~----~v~~~---~g~--~~~~D~vi~a~G~~~~~p~~~~l~~~~~~------------- 294 (354)
+.+.+ +++.++.++++..++ .+++. +|+ ++++|.||+|+|+. ||+++++..+..
T Consensus 200 l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~---p~~~~l~~~gl~~~~~g~i~vd~~~ 276 (319)
T 3cty_A 200 IKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLI---PQTSFLKDSGVKLDERGYIVVDSRQ 276 (319)
T ss_dssp HHHTTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCEE---ECCGGGTTSCCCBCTTSCBCCCTTC
T ss_pred HhcCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCCc---cChHHHhhccccccCCccEeCCCCC
Confidence 33444 899999999998653 26665 564 68999999999999 777777643221
Q ss_pred ---hceeeeecccchh
Q 018550 295 ---LWMTIVLGHCTST 307 (354)
Q Consensus 295 ---~~~i~a~GD~~~~ 307 (354)
..+|||+|||+..
T Consensus 277 ~t~~~~vya~GD~~~~ 292 (319)
T 3cty_A 277 RTSVPGVYAAGDVTSG 292 (319)
T ss_dssp BCSSTTEEECSTTBTT
T ss_pred ccCCCCEEEeecccCc
Confidence 2349999999874
No 18
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.98 E-value=3.8e-32 Score=239.27 Aligned_cols=249 Identities=18% Similarity=0.236 Sum_probs=184.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCC-cEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGH-TVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGF 80 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~-~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (354)
+++|+|||||++|+++|..|++.|+ +|+|||++ .+||.|....... .+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~~~~~~~~------------------------------~~ 49 (311)
T 2q0l_A 1 MIDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQITGSSEIE------------------------------NY 49 (311)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGGGGCSCBC------------------------------CS
T ss_pred CceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCcccccccccc------------------------------cC
Confidence 4789999999999999999999999 99999995 6788776531100 00
Q ss_pred cCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEE
Q 018550 81 QAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVV 160 (354)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIl 160 (354)
+.++ ....+..+.+++.+.+.+++++ ++. .+|++++.++ +.|.+.+.++. ++.||+||+
T Consensus 50 ~~~~-------------~~~~~~~~~~~l~~~~~~~~v~--~~~-~~v~~i~~~~-~~~~v~~~~g~----~~~~~~vv~ 108 (311)
T 2q0l_A 50 PGVK-------------EVVSGLDFMQPWQEQCFRFGLK--HEM-TAVQRVSKKD-SHFVILAEDGK----TFEAKSVII 108 (311)
T ss_dssp TTCC-------------SCBCHHHHHHHHHHHHHTTSCE--EEC-SCEEEEEEET-TEEEEEETTSC----EEEEEEEEE
T ss_pred CCCc-------------ccCCHHHHHHHHHHHHHHcCCE--EEE-EEEEEEEEcC-CEEEEEEcCCC----EEECCEEEE
Confidence 0111 1123478889999988888888 777 7899999876 67888776654 799999999
Q ss_pred eeCCCCCcccCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC----ccccc
Q 018550 161 CNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA----DETHE 236 (354)
Q Consensus 161 AtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~----~~~~~ 236 (354)
||| +.++.|+++|...+.+..++.....+.....+++++|||+|.+|+|+|..|++.|.+|+++++++. +...+
T Consensus 109 AtG--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~ 186 (311)
T 2q0l_A 109 ATG--GSPKRTGIKGESEYWGKGVSTCATCDGFFYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFRCAPITLE 186 (311)
T ss_dssp CCC--EEECCCCCBTHHHHBTTTEESCHHHHGGGGTTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCCSCHHHHH
T ss_pred CCC--CCCCCCCCCChhhccCCcEEEeecCChhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccCCCHHHHH
Confidence 999 788888888865443333443322222334679999999999999999999999999999999774 22233
Q ss_pred cCC-CCC-CeEEecceeEEecC-C---cEEEc---cCc--EEecCEEEEcccCCCccCcccccCchh----hh-------
Q 018550 237 KQP-GYD-NMWLHSMVERANED-G---TVVFR---NGR--VVSADVIMHCTGLTGTSTTTLFLKPMA----LL------- 294 (354)
Q Consensus 237 ~l~-~~~-~~~~~~~v~~v~~~-~---~v~~~---~g~--~~~~D~vi~a~G~~~~~p~~~~l~~~~----~~------- 294 (354)
++. +.+ +++.++.++++..+ + .|+++ +|+ ++++|.||+|+|++ |+++++...+ ..
T Consensus 187 ~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~---p~~~~l~~~g~~~~l~~~~~g~i 263 (311)
T 2q0l_A 187 HAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGYD---VNNAVLKQEDNSMLCKCDEYGSI 263 (311)
T ss_dssp HHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEE---ECCGGGBCTTSCBSSCBCTTSCB
T ss_pred HHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecCc---cChhhhhcccccceeEeccCCCE
Confidence 343 334 78888899999754 3 26665 565 78999999999999 7777765542 11
Q ss_pred ---------hceeeeecccchh
Q 018550 295 ---------LWMTIVLGHCTST 307 (354)
Q Consensus 295 ---------~~~i~a~GD~~~~ 307 (354)
..+|||+|||+..
T Consensus 264 ~vd~~~~t~~~~vya~GD~~~~ 285 (311)
T 2q0l_A 264 VVDFSMKTNVQGLFAAGDIRIF 285 (311)
T ss_dssp CCCTTCBCSSTTEEECSTTBTT
T ss_pred EeCCccccCCCCeEEcccccCc
Confidence 2359999999873
No 19
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.97 E-value=8.5e-32 Score=236.93 Aligned_cols=249 Identities=19% Similarity=0.242 Sum_probs=183.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
+++|+|||||++|+++|..|++.|++|+|+|+ .+||.|....... .+.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~--~~gG~~~~~~~~~------------------------------~~~ 48 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGE--RFGGQILDTVDIE------------------------------NYI 48 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECS--STTGGGGGCCEEC------------------------------CBT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeC--CCCceeccccccc------------------------------ccc
Confidence 47899999999999999999999999999986 4688776521100 000
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCC--CcEEEEEeecCCceEEEEeCEEE
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVES--NKWKVKSRKKDDVVEEETFDAVV 159 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~--~~~~v~~~~g~~~~~~~~~d~vI 159 (354)
.. .+....++.+++.+.+++.+++ ++.+++|+.++.+.+ +.|.+.+.++. ++.||+||
T Consensus 49 ~~--------------~~~~~~~~~~~~~~~~~~~~v~--~~~~~~v~~i~~~~~~~~~~~v~~~~g~----~~~~~~lv 108 (310)
T 1fl2_A 49 SV--------------PKTEGQKLAGALKVHVDEYDVD--VIDSQSASKLIPAAVEGGLHQIETASGA----VLKARSII 108 (310)
T ss_dssp TB--------------SSEEHHHHHHHHHHHHHTSCEE--EECSCCEEEEECCSSTTCCEEEEETTSC----EEEEEEEE
T ss_pred Cc--------------CCCCHHHHHHHHHHHHHHcCCe--EEccCEEEEEEecccCCceEEEEECCCC----EEEeCEEE
Confidence 01 1123378888999888888887 888889999986531 37888887664 78999999
Q ss_pred EeeCCCCCcccCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCCc----ccc
Q 018550 160 VCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVAD----ETH 235 (354)
Q Consensus 160 lAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~~----~~~ 235 (354)
+||| +.++.|+++|.+.+....++.....+.....+++++|||+|++|+|+|..|++.+.+|+++++.+.. ...
T Consensus 109 ~AtG--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~ 186 (310)
T 1fl2_A 109 VATG--AKWRNMNVPGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKADQVLQ 186 (310)
T ss_dssp ECCC--EEECCCCCTTTTTTBTTTEESCHHHHGGGGBTCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCCSCHHHH
T ss_pred ECcC--CCcCCCCCCChhhcccceeEEeccCcHhhcCCCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccCccHHHH
Confidence 9999 6788888888876544444433322223346799999999999999999999999999999998751 122
Q ss_pred ccCCC-CC-CeEEecceeEEecC-Cc---EEEcc---C--cEEecCEEEEcccCCCccCcccccCchhh-----------
Q 018550 236 EKQPG-YD-NMWLHSMVERANED-GT---VVFRN---G--RVVSADVIMHCTGLTGTSTTTLFLKPMAL----------- 293 (354)
Q Consensus 236 ~~l~~-~~-~~~~~~~v~~v~~~-~~---v~~~~---g--~~~~~D~vi~a~G~~~~~p~~~~l~~~~~----------- 293 (354)
+++.+ .+ +++.++.++++..+ +. |++.+ | .++++|.|++|+|++ ||++++.....
T Consensus 187 ~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~---p~~~~l~~~l~~~~~g~i~vd~ 263 (310)
T 1fl2_A 187 DKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGLL---PNTNWLEGAVERNRMGEIIIDA 263 (310)
T ss_dssp HHHHTCTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEE---ESCGGGTTTSCBCTTSCBCCCT
T ss_pred HHHhhCCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeCCc---cCchHHhccccccCCCcEEcCC
Confidence 33433 34 88888999999865 22 56654 4 368999999999999 77777654211
Q ss_pred ----hhceeeeecccchh
Q 018550 294 ----LLWMTIVLGHCTST 307 (354)
Q Consensus 294 ----~~~~i~a~GD~~~~ 307 (354)
...+|||+|||+..
T Consensus 264 ~~~t~~~~vya~GD~~~~ 281 (310)
T 1fl2_A 264 KCETNVKGVFAAGDCTTV 281 (310)
T ss_dssp TCBCSSTTEEECSTTBSC
T ss_pred CCccCCCCEEEeecccCC
Confidence 02359999999974
No 20
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=99.97 E-value=5.4e-31 Score=243.39 Aligned_cols=263 Identities=16% Similarity=0.135 Sum_probs=177.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHc--CCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhccccccc
Q 018550 1 MFRHVAVIGAGAAGLVVGHELLRE--GHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELM 78 (354)
Q Consensus 1 ~~~~vvIIG~G~aG~~~a~~l~~~--g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (354)
|+++|+|||||++|+++|..|++. |.+|+|||+++.+|...... . .+ ...
T Consensus 1 M~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~---~----------------~~------~~~--- 52 (452)
T 3oc4_A 1 MSLKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGL---S----------------AY------FNH--- 52 (452)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC------------------------------------
T ss_pred CCCCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccc---h----------------hh------hcC---
Confidence 668999999999999999999998 89999999987654110000 0 00 000
Q ss_pred cccCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEE
Q 018550 79 GFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAV 158 (354)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~v 158 (354)
. +....++.....+.+.+.+++ ++++++|++++..+ +.+.+.... ...++.||+|
T Consensus 53 ---~----------------~~~~~~~~~~~~~~~~~~gi~--~~~~~~V~~id~~~-~~v~v~~~~---~~~~~~~d~l 107 (452)
T 3oc4_A 53 ---T----------------INELHEARYITEEELRRQKIQ--LLLNREVVAMDVEN-QLIAWTRKE---EQQWYSYDKL 107 (452)
T ss_dssp ---------------------------CCCCHHHHHHTTEE--EECSCEEEEEETTT-TEEEEEETT---EEEEEECSEE
T ss_pred ---C----------------CCCHHHhhcCCHHHHHHCCCE--EEECCEEEEEECCC-CEEEEEecC---ceEEEEcCEE
Confidence 0 000011111123344567777 88899999998765 556664111 2358999999
Q ss_pred EEeeCCCCCcccCCCCCCCCCCcceeecccCCCCCC-----CCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC--
Q 018550 159 VVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNP-----FQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA-- 231 (354)
Q Consensus 159 IlAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~-----~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~-- 231 (354)
|+||| +.|+.|+++|.+. ...++...+.+... ..+++++|||+|.+|+|+|..|++.|.+|+++.+.+.
T Consensus 108 viAtG--~~p~~p~i~g~~~--~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 183 (452)
T 3oc4_A 108 ILATG--ASQFSTQIRGSQT--EKLLKYKFLSGALAAVPLLENSQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLL 183 (452)
T ss_dssp EECCC--CCBCCCCCBTTTC--TTEEEGGGCC----CCHHHHTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS
T ss_pred EECCC--cccCCCCCCCCCC--CCEEEeCCHHHHHHHHHHHhcCCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccc
Confidence 99999 8999999988764 13344333322211 2579999999999999999999999999999999764
Q ss_pred ---------ccccccCCCCC-CeEEecceeEEe-cCCc--EEEccCcEEecCEEEEcccCCCccCcccccCchhh-----
Q 018550 232 ---------DETHEKQPGYD-NMWLHSMVERAN-EDGT--VVFRNGRVVSADVIMHCTGLTGTSTTTLFLKPMAL----- 293 (354)
Q Consensus 232 ---------~~~~~~l~~~~-~~~~~~~v~~v~-~~~~--v~~~~g~~~~~D~vi~a~G~~~~~p~~~~l~~~~~----- 293 (354)
+...+.+++.+ +++.++.|++++ .++. |.++++ ++++|.||+|+|++ |+++++.....
T Consensus 184 ~~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A~G~~---p~~~~l~~~~~~~~~g 259 (452)
T 3oc4_A 184 PKYFDKEMVAEVQKSLEKQAVIFHFEETVLGIEETANGIVLETSEQ-EISCDSGIFALNLH---PQLAYLDKKIQRNLDQ 259 (452)
T ss_dssp TTTCCHHHHHHHHHHHHTTTEEEEETCCEEEEEECSSCEEEEESSC-EEEESEEEECSCCB---CCCSSCCTTSCBCTTS
T ss_pred cccCCHHHHHHHHHHHHHcCCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEEEECcCCC---CChHHHHhhhccCCCC
Confidence 11223345555 899999999998 3343 455555 89999999999999 77777654211
Q ss_pred ----------hhceeeeecccchh----------------hHHHHHHHhhhccCCCc
Q 018550 294 ----------LLWMTIVLGHCTST----------------FFRQSWHQAFHLLGYHR 324 (354)
Q Consensus 294 ----------~~~~i~a~GD~~~~----------------~~~~~~~~~~~~~~~~~ 324 (354)
...+|||+|||+.. ...|+...+.++.+...
T Consensus 260 ~i~vd~~~~t~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~~~ 316 (452)
T 3oc4_A 260 TIAVDAYLQTSVPNVFAIGDCISVMNEPVAETFYAPLVNNAVRTGLVVANNLEEKTH 316 (452)
T ss_dssp CBCCCTTCBCSSTTEEECGGGBCEEEGGGTEEECCCCHHHHHHHHHHHTTSSSSCCC
T ss_pred CEEECcCccCCCCCEEEEEeeEEeccccCCceeecchHHHHHHHHHHHHHHhcCCCc
Confidence 12349999999863 34566667777766543
No 21
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.97 E-value=4.5e-32 Score=253.21 Aligned_cols=289 Identities=19% Similarity=0.192 Sum_probs=184.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccc-cccchhccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSL-YKSLRVNLPRELMGF 80 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 80 (354)
++||+|||||++|+++|..|++.|++|+|||+.+.+||+|.+. +|.|.+.+..... +..+...........
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~--------gciP~k~l~~~~~~~~~~~~~~~~~g~~~ 96 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNV--------GCIPSKALLHASEMFHQAQHGLEALGVEV 96 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHH--------SHHHHHHHHHHHHHHHHHHHSSGGGTEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccc--------cchhhHHHHHHHHHHHHHHhhHhhcCccc
Confidence 4799999999999999999999999999999988999999874 6776655443322 222211111111110
Q ss_pred cCCCCCccCCCCCCCCCCCCCHHHH-----------HHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCc
Q 018550 81 QAYPFVARNYEGSVDLRRYPGHEEV-----------LRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDV 149 (354)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~ 149 (354)
... ..++..+ ...+.....+.+++ +..+. ...+ +. +.+.+...++ .
T Consensus 97 ~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~g~-~~~~--~~-~~~~v~~~~g--~ 153 (491)
T 3urh_A 97 ANP---------------KLNLQKMMAHKDATVKSNVDGVSFLFKKNKID--GFQGT-GKVL--GQ-GKVSVTNEKG--E 153 (491)
T ss_dssp CCC---------------EECHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEESE-EEEC--SS-SEEEEECTTS--C
T ss_pred CCC---------------ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEEE-EEEe--cC-CEEEEEeCCC--c
Confidence 000 0011222 22233444555666 55543 2222 22 4455554333 2
Q ss_pred eEEEEeCEEEEeeCCCCCcccCCCCCCCC-CCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEe
Q 018550 150 VEEETFDAVVVCNGHFSVPRLAQVPGIDS-WPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASR 228 (354)
Q Consensus 150 ~~~~~~d~vIlAtG~~s~~~~p~~~g~~~-~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r 228 (354)
..++.||+||+||| +.| +.+||... +.+..++...........+++++|||+|++|+|+|..|++.|.+|+++++
T Consensus 154 ~~~~~~d~lViATG--s~p--~~ipg~~~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~ 229 (491)
T 3urh_A 154 EQVLEAKNVVIATG--SDV--AGIPGVEVAFDEKTIVSSTGALALEKVPASMIVVGGGVIGLELGSVWARLGAKVTVVEF 229 (491)
T ss_dssp EEEEECSEEEECCC--EEC--CCBTTBCCCCCSSSEECHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECS
T ss_pred eEEEEeCEEEEccC--CCC--CCCCCcccccCCeeEEehhHhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCEEEEEec
Confidence 35899999999999 554 34566542 22232333222222334679999999999999999999999999999998
Q ss_pred cCC----------ccccccCCCCC-CeEEecceeEEecCCc---EEEcc---C--cEEecCEEEEcccCCCccCccccc-
Q 018550 229 SVA----------DETHEKQPGYD-NMWLHSMVERANEDGT---VVFRN---G--RVVSADVIMHCTGLTGTSTTTLFL- 288 (354)
Q Consensus 229 ~~~----------~~~~~~l~~~~-~~~~~~~v~~v~~~~~---v~~~~---g--~~~~~D~vi~a~G~~~~~p~~~~l- 288 (354)
.+. +...+.+++.+ +++.++.|+++..++. +.+++ | +++++|.||+|+|++ |+++++
T Consensus 230 ~~~~l~~~d~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~---p~~~~l~ 306 (491)
T 3urh_A 230 LDTILGGMDGEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRK---PSTDGLG 306 (491)
T ss_dssp SSSSSSSSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCCE---ECCTTSC
T ss_pred cccccccCCHHHHHHHHHHHHhCCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCCc---cCCCccC
Confidence 764 11223334444 8889999999985432 55553 4 579999999999999 777653
Q ss_pred -Cchhhh----------------hceeeeecccchh------hHHHHHHHhhhccCCCccccc
Q 018550 289 -KPMALL----------------LWMTIVLGHCTST------FFRQSWHQAFHLLGYHRRLSL 328 (354)
Q Consensus 289 -~~~~~~----------------~~~i~a~GD~~~~------~~~~~~~~~~~~~~~~~~~~~ 328 (354)
...+.. ..+|||+|||+.. ...|+...+.++.+....+.+
T Consensus 307 l~~~g~~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~ 369 (491)
T 3urh_A 307 LAKAGVVLDSRGRVEIDRHFQTSIAGVYAIGDVVRGPMLAHKAEDEGVAVAEIIAGQAGHVNY 369 (491)
T ss_dssp HHHHTCCBCTTSCBCCCTTCBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHTTSCCCCCT
T ss_pred chhcCceECCCCCEeECCCCCCCCCCEEEEEecCCCccchhHHHHHHHHHHHHHcCCCcccCC
Confidence 211111 2349999999952 456777788888776544333
No 22
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.97 E-value=5.1e-32 Score=252.15 Aligned_cols=284 Identities=14% Similarity=0.168 Sum_probs=187.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCccccc-ccccchhccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSS-LYKSLRVNLPRELMGF 80 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 80 (354)
+++|+|||||++|+++|..|++.|.+|+|||+++.+||.|... +|.|.+.++... .+..+.. ... +
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~--------g~~psk~ll~~~~~~~~~~~-~~~--~-- 72 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNV--------GCIPSKALLHNAAVIDEVRH-LAA--N-- 72 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHH--------SHHHHHHHHHHHHHHHHHHH-GGG--G--
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeee--------cccchHHHHHHHHHHHHHHH-HHh--C--
Confidence 3689999999999999999999999999999988899998763 555543332211 1111111 100 0
Q ss_pred cCCCCCccCCCCCCCCCCCCCHHHHH-----------HHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeec---
Q 018550 81 QAYPFVARNYEGSVDLRRYPGHEEVL-----------RYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKK--- 146 (354)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g--- 146 (354)
+.++.. ...+...+. ..+...+.+.+++ ++.++.+. .++ +.+.+...++
T Consensus 73 -gi~~~~----------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~--~~~g~~~~---~~~-~~v~v~~~~g~~~ 135 (482)
T 1ojt_A 73 -GIKYPE----------PELDIDMLRAYKDGVVSRLTGGLAGMAKSRKVD--VIQGDGQF---LDP-HHLEVSLTAGDAY 135 (482)
T ss_dssp -TCCCCC----------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEEEEEEE---EET-TEEEEEEEEEEET
T ss_pred -CcccCC----------CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcE--EEeeEEEE---ccC-CEEEEEecCCccc
Confidence 111100 001112222 2234555666787 77765443 233 5666665443
Q ss_pred -----CCceEEEEeCEEEEeeCCCCCcccCC-CCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccC
Q 018550 147 -----DDVVEEETFDAVVVCNGHFSVPRLAQ-VPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFA 220 (354)
Q Consensus 147 -----~~~~~~~~~d~vIlAtG~~s~~~~p~-~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g 220 (354)
++...++.||+||+||| +.|+.|+ ++ .+. .+.++....... ..+++++|||+|++|+|+|..|++.|
T Consensus 136 ~~~~~~g~~~~i~ad~lViAtG--s~p~~~~~i~-~~~---~v~~~~~~~~~~-~~~~~vvViGgG~ig~E~A~~l~~~G 208 (482)
T 1ojt_A 136 EQAAPTGEKKIVAFKNCIIAAG--SRVTKLPFIP-EDP---RIIDSSGALALK-EVPGKLLIIGGGIIGLEMGTVYSTLG 208 (482)
T ss_dssp TEEEEEEEEEEEEEEEEEECCC--EEECCCSSCC-CCT---TEECHHHHTTCC-CCCSEEEEESCSHHHHHHHHHHHHHT
T ss_pred ccccccCcceEEEcCEEEECCC--CCCCCCCCCC-ccC---cEEcHHHHhccc-ccCCeEEEECCCHHHHHHHHHHHHcC
Confidence 11124789999999999 7787776 44 222 344443333322 24799999999999999999999999
Q ss_pred CEEEEEEecCC----------ccccccCCCCC-CeEEecceeEEecCCc---EEEcc----CcEEecCEEEEcccCCCcc
Q 018550 221 KEVHIASRSVA----------DETHEKQPGYD-NMWLHSMVERANEDGT---VVFRN----GRVVSADVIMHCTGLTGTS 282 (354)
Q Consensus 221 ~~v~~~~r~~~----------~~~~~~l~~~~-~~~~~~~v~~v~~~~~---v~~~~----g~~~~~D~vi~a~G~~~~~ 282 (354)
.+|+++++.+. +...+.+++.+ +++.++.|+++..++. +++++ |+++++|.||+|+|++
T Consensus 209 ~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~--- 285 (482)
T 1ojt_A 209 SRLDVVEMMDGLMQGADRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRA--- 285 (482)
T ss_dssp CEEEEECSSSSSSTTSCHHHHHHHHHHHGGGEEEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCEE---
T ss_pred CeEEEEEECCccccccCHHHHHHHHHHHHhcCCEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCCC---
Confidence 99999999874 11223344555 8899999999985432 66666 7789999999999999
Q ss_pred Cccccc--Cchhhh----------------hceeeeecccchh------hHHHHHHHhhhccCCCcc
Q 018550 283 TTTLFL--KPMALL----------------LWMTIVLGHCTST------FFRQSWHQAFHLLGYHRR 325 (354)
Q Consensus 283 p~~~~l--~~~~~~----------------~~~i~a~GD~~~~------~~~~~~~~~~~~~~~~~~ 325 (354)
||++++ +..+.. ..+|||+|||+.. ...|+...+.++.+....
T Consensus 286 p~~~~l~~~~~gl~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~~~~ 352 (482)
T 1ojt_A 286 PNGKLISAEKAGVAVTDRGFIEVDKQMRTNVPHIYAIGDIVGQPMLAHKAVHEGHVAAENCAGHKAY 352 (482)
T ss_dssp ECGGGTTGGGTTCCCCTTSCCCCCTTSBCSSTTEEECGGGTCSSCCHHHHHHHHHHHHHHHTTCCCC
T ss_pred cCCCCCChhhcCceeCCCCCEeeCCCcccCCCCEEEEEcccCCCccHHHHHHHHHHHHHHHcCCCcc
Confidence 777763 333221 1349999999873 356777778888775433
No 23
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.97 E-value=1e-31 Score=237.54 Aligned_cols=248 Identities=17% Similarity=0.246 Sum_probs=180.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
+++|+|||||++|+++|..|++.|++|++||+. .+||.|....... .++
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~~~------------------------------~~~ 53 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQPVLITGM-EKGGQLTTTTEVE------------------------------NWP 53 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS-STTGGGGGCSBCC------------------------------CST
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC-CCCceEecchhhh------------------------------hCC
Confidence 368999999999999999999999999999974 6788776521100 000
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEe
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlA 161 (354)
.++. .....++.+++.+.+.+.+++ ++.++ +..++..+ +.|++ ..++. ++.||+||+|
T Consensus 54 ~~~~-------------~~~~~~~~~~~~~~~~~~~~~--~~~~~-v~~i~~~~-~~~~v-~~~~~----~~~~~~lv~A 111 (320)
T 1trb_A 54 GDPN-------------DLTGPLLMERMHEHATKFETE--IIFDH-INKVDLQN-RPFRL-NGDNG----EYTCDALIIA 111 (320)
T ss_dssp TCCS-------------SCBHHHHHHHHHHHHHHTTCE--EECCC-EEEEECSS-SSEEE-EESSC----EEEEEEEEEC
T ss_pred CCCC-------------CCCHHHHHHHHHHHHHHCCCE--EEEee-eeEEEecC-CEEEE-EeCCC----EEEcCEEEEC
Confidence 1110 112377888888888888988 77765 88888766 77887 55543 7899999999
Q ss_pred eCCCCCcccCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCCc--------c
Q 018550 162 NGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVAD--------E 233 (354)
Q Consensus 162 tG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~~--------~ 233 (354)
|| +.++.|.++|...+.+..++.....+.....+++++|||+|.+|+|+|..|++.+.+|+++++++.. .
T Consensus 112 tG--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~ 189 (320)
T 1trb_A 112 TG--ASARYLGLPSEEAFKGRGVSACATSDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRAEKILIKR 189 (320)
T ss_dssp CC--EEECCCCCHHHHHTBTTTEESCHHHHGGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCCCHHHHHH
T ss_pred CC--CCcCCCCCCChHHhCCceeEecccCCccccCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccccCHHHHHH
Confidence 99 7788888877654433334433222222346799999999999999999999999999999997641 1
Q ss_pred ccccCCCCC-CeEEecceeEEecCC-c---EEEcc----C--cEEecCEEEEcccCCCccCcccccCc-h----------
Q 018550 234 THEKQPGYD-NMWLHSMVERANEDG-T---VVFRN----G--RVVSADVIMHCTGLTGTSTTTLFLKP-M---------- 291 (354)
Q Consensus 234 ~~~~l~~~~-~~~~~~~v~~v~~~~-~---v~~~~----g--~~~~~D~vi~a~G~~~~~p~~~~l~~-~---------- 291 (354)
..+.+.+.+ +++.++.|+++..++ . |++++ | .++++|.||+|+|++ |++++++. .
T Consensus 190 l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~---p~~~~~~~~l~~~~G~i~vd 266 (320)
T 1trb_A 190 LMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHS---PNTAIFEGQLELENGYIKVQ 266 (320)
T ss_dssp HHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEE---ESCGGGTTTSCEETTEECCC
T ss_pred HHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCC---CChHHhcccccccCceEEEC
Confidence 222333445 888999999998654 2 66654 4 578999999999999 76666641 1
Q ss_pred --------hhhhceeeeecccchh
Q 018550 292 --------ALLLWMTIVLGHCTST 307 (354)
Q Consensus 292 --------~~~~~~i~a~GD~~~~ 307 (354)
.....+||++|||+..
T Consensus 267 ~~~~~~~~~t~~~~vya~GD~~~~ 290 (320)
T 1trb_A 267 SGIHGNATQTSIPGVFAAGDVMDH 290 (320)
T ss_dssp CSSSSCTTBCSSTTEEECGGGGCS
T ss_pred CCcccccccCCCCCEEEcccccCC
Confidence 1123469999999874
No 24
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.97 E-value=2.5e-31 Score=234.36 Aligned_cols=248 Identities=23% Similarity=0.282 Sum_probs=185.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEE-EeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVV-YEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGF 80 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~l-ie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (354)
+++|+|||||++|+++|..|++.|++|+| +|+ +.+||.|....... .+
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~~~~~~------------------------------~~ 52 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITSSSEIE------------------------------NY 52 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGGCSCBC------------------------------CS
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeeeeceec------------------------------cC
Confidence 57999999999999999999999999999 999 67888887631110 00
Q ss_pred cCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCC-CcEEEEEeecCCceEEEEeCEEE
Q 018550 81 QAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVES-NKWKVKSRKKDDVVEEETFDAVV 159 (354)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~-~~~~v~~~~g~~~~~~~~~d~vI 159 (354)
+.++ .+....++..++.+.+.+++++ ++++ +|.++ .+++ +.|.+....+. ++.||+||
T Consensus 53 ~~~~-------------~~~~~~~~~~~~~~~~~~~~v~--~~~~-~v~~i-~~~~~~~~~v~~~~~~----~~~~d~lv 111 (315)
T 3r9u_A 53 PGVA-------------QVMDGISFMAPWSEQCMRFGLK--HEMV-GVEQI-LKNSDGSFTIKLEGGK----TELAKAVI 111 (315)
T ss_dssp TTCC-------------SCBCHHHHHHHHHHHHTTTCCE--EECC-CEEEE-EECTTSCEEEEETTSC----EEEEEEEE
T ss_pred CCCC-------------CCCCHHHHHHHHHHHHHHcCcE--EEEE-EEEEE-ecCCCCcEEEEEecCC----EEEeCEEE
Confidence 1111 1224488999999999999988 7776 88888 5431 46775444332 78999999
Q ss_pred EeeCCCCCcccCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC----cccc
Q 018550 160 VCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA----DETH 235 (354)
Q Consensus 160 lAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~----~~~~ 235 (354)
+||| +.++.|.++|...+.+..++...+.+.....+++++|||+|.+|+|+|..|.+.+.+|+++++.+. ....
T Consensus 112 lAtG--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~ 189 (315)
T 3r9u_A 112 VCTG--SAPKKAGFKGEDEFFGKGVSTCATCDGFFYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRAAPSTV 189 (315)
T ss_dssp ECCC--EEECCCCCBTTTTTBTTTEESCHHHHGGGGTTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCBSCHHHH
T ss_pred EeeC--CCCCCCCCCChhhcCCCeEEeeecccccccCcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCCCCHHHH
Confidence 9999 788999999988766566665544444445689999999999999999999999999999999875 1122
Q ss_pred ccC-CCCC-CeEEecceeEEecCC-c---EEEc--cCc--EEecCEEEEcccCCCccCcccccCc---hh-hh-------
Q 018550 236 EKQ-PGYD-NMWLHSMVERANEDG-T---VVFR--NGR--VVSADVIMHCTGLTGTSTTTLFLKP---MA-LL------- 294 (354)
Q Consensus 236 ~~l-~~~~-~~~~~~~v~~v~~~~-~---v~~~--~g~--~~~~D~vi~a~G~~~~~p~~~~l~~---~~-~~------- 294 (354)
+++ ++.+ +++.++.+.++..++ . |++. +|+ ++++|.|++|+|++ |+.+++.. .+ ..
T Consensus 190 ~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~---p~~~~~~~~~~~g~l~~~~~g~i 266 (315)
T 3r9u_A 190 EKVKKNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGLN---VRNEILKQDDSKFLCNMEEGGQV 266 (315)
T ss_dssp HHHHHCTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECSCEE---ECCGGGBCTTSCBSSCBCTTSCB
T ss_pred HHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEcCC---CCchhhhcccccceeeecCCCcE
Confidence 222 3444 888899999998554 2 5565 775 78999999999999 77666554 11 11
Q ss_pred ---------hceeeeecccch
Q 018550 295 ---------LWMTIVLGHCTS 306 (354)
Q Consensus 295 ---------~~~i~a~GD~~~ 306 (354)
..+|||+|||+.
T Consensus 267 ~vd~~~~t~~~~v~a~GD~~~ 287 (315)
T 3r9u_A 267 SVDLKMQTSVAGLFAAGDLRK 287 (315)
T ss_dssp CCCTTCBCSSTTEEECGGGBT
T ss_pred EeCCCcccCCCCEEEeecccC
Confidence 145999999974
No 25
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.97 E-value=2.4e-30 Score=243.94 Aligned_cols=202 Identities=28% Similarity=0.466 Sum_probs=156.7
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhccccccccccC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (354)
++|+|||||++|+++|..|++.|++|+|||+++.+||+|..+ +.|.... +.+...+.+
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~---------~~pg~~~-----------d~~~~~~~~-- 74 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWN---------RYPGARC-----------DIESIEYCY-- 74 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHC---------CCTTCBC-----------SSCTTTSSC--
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccc---------CCCceee-----------ccccccccc--
Confidence 689999999999999999999999999999999999999753 1111100 001000100
Q ss_pred CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCC-CcEEEEEeecCCceEEEEeCEEEEe
Q 018550 83 YPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVES-NKWKVKSRKKDDVVEEETFDAVVVC 161 (354)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~-~~~~v~~~~g~~~~~~~~~d~vIlA 161 (354)
.+.........+...|+.+.++.+|+...++++++..+++++++|++++++++ +.|+|++.+|. ++.+|+||+|
T Consensus 75 -~f~~~~~~~~~~~~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~----~~~ad~vV~A 149 (542)
T 1w4x_A 75 -SFSEEVLQEWNWTERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGD----RIRARYLIMA 149 (542)
T ss_dssp -CSCHHHHHHCCCCBSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCC----EEEEEEEEEC
T ss_pred -ccChhhhhccCcccccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCC----EEEeCEEEEC
Confidence 00000000001233567789999999999999886655999999999998753 57999887764 7899999999
Q ss_pred eCCCCCcccCCCCCCCCCCcceeecccCC-CCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC
Q 018550 162 NGHFSVPRLAQVPGIDSWPGKQMHSHNYR-IPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA 231 (354)
Q Consensus 162 tG~~s~~~~p~~~g~~~~~~~~~~~~~~~-~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~ 231 (354)
||.++.|+.|+++|.+.+.+..+|+..+. +.....+++|+|||+|.+|+|++..|++.+++|+++.|++.
T Consensus 150 tG~~s~p~~p~i~G~~~f~G~~~hs~~~~~~~~~~~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~ 220 (542)
T 1w4x_A 150 SGQLSVPQLPNFPGLKDFAGNLYHTGNWPHEPVDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPH 220 (542)
T ss_dssp CCSCCCCCCCCCTTGGGCCSEEEEGGGCCSSCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred cCCCCCCCCCCCCCcccCCCceEECCCCCCchhccCCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCc
Confidence 99999999999999988888889888776 43556899999999999999999999999999999998763
No 26
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.97 E-value=5.3e-31 Score=237.53 Aligned_cols=266 Identities=20% Similarity=0.260 Sum_probs=180.2
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCC-cEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGH-TVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~-~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
++|+|||||++|+++|..|++.|. +|+|||+++ +|+.|...+.... ...|. .....+++.
T Consensus 5 ~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~~~~~~---~~~~~---------------~~~~~~g~~ 65 (369)
T 3d1c_A 5 HKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHWPKSTR---TITPS---------------FTSNGFGMP 65 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTSCTTCB---CSSCC---------------CCCGGGTCC
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccCccccc---ccCcc---------------hhcccCCch
Confidence 789999999999999999999999 999999987 9998876422110 00000 000011111
Q ss_pred CCCCCccCCC-CCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEE
Q 018550 82 AYPFVARNYE-GSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVV 160 (354)
Q Consensus 82 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIl 160 (354)
++........ .......++....+.+++.+.+++++++ ++++++|++++.++ +.|.+.+.++ ++.||+||+
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~--i~~~~~v~~i~~~~-~~~~v~~~~g-----~~~~d~vVl 137 (369)
T 3d1c_A 66 DMNAISMDTSPAFTFNEEHISGETYAEYLQVVANHYELN--IFENTVVTNISADD-AYYTIATTTE-----TYHADYIFV 137 (369)
T ss_dssp CTTCSSTTCCHHHHHCCSSCBHHHHHHHHHHHHHHTTCE--EECSCCEEEEEECS-SSEEEEESSC-----CEEEEEEEE
T ss_pred hhhhccccccccccccccCCCHHHHHHHHHHHHHHcCCe--EEeCCEEEEEEECC-CeEEEEeCCC-----EEEeCEEEE
Confidence 1110000000 0001133566688999999999999998 89999999999876 6788887654 589999999
Q ss_pred eeCCCCCcccCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCCcc-------
Q 018550 161 CNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVADE------- 233 (354)
Q Consensus 161 AtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~------- 233 (354)
|||+++.|. +++ +..+++..+.+...+++++|+|||+|.+|+|+|..|++.|.+|+++++++...
T Consensus 138 AtG~~~~p~---ip~-----~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~~d~~ 209 (369)
T 3d1c_A 138 ATGDYNFPK---KPF-----KYGIHYSEIEDFDNFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPS 209 (369)
T ss_dssp CCCSTTSBC---CCS-----SSCEEGGGCSCGGGSCSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC----------CT
T ss_pred CCCCCCccC---CCC-----CceechhhcCChhhcCCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCCCCCC
Confidence 999655443 444 24456656655555567899999999999999999999999999999876310
Q ss_pred ----------ccccCCCC--CCeEEecceeEEecC-C--cEEEccCcEEe-cCEEEEcccCCCccCcccccCchhh----
Q 018550 234 ----------THEKQPGY--DNMWLHSMVERANED-G--TVVFRNGRVVS-ADVIMHCTGLTGTSTTTLFLKPMAL---- 293 (354)
Q Consensus 234 ----------~~~~l~~~--~~~~~~~~v~~v~~~-~--~v~~~~g~~~~-~D~vi~a~G~~~~~p~~~~l~~~~~---- 293 (354)
..+.+++. .+++.++.|.++..+ + .|++.+|+++. +|.||+|+|++ |+.+++.+...
T Consensus 210 ~~~~~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~d~vi~a~G~~---~~~~~~~~~~~~~~~ 286 (369)
T 3d1c_A 210 VRLSPYTRQRLGNVIKQGARIEMNVHYTVKDIDFNNGQYHISFDSGQSVHTPHEPILATGFD---ATKNPIVQQLFVTTN 286 (369)
T ss_dssp TSCCHHHHHHHHHHHHTTCCEEEECSCCEEEEEEETTEEEEEESSSCCEEESSCCEECCCBC---GGGSHHHHHHSCCTT
T ss_pred ccCCHHHHHHHHHHHhhCCcEEEecCcEEEEEEecCCceEEEecCCeEeccCCceEEeeccC---CccchhhhhhccCCC
Confidence 11112233 477888899999532 2 26778887665 69999999999 66544332110
Q ss_pred ------------hhceeeeecccch
Q 018550 294 ------------LLWMTIVLGHCTS 306 (354)
Q Consensus 294 ------------~~~~i~a~GD~~~ 306 (354)
...+||++|||+.
T Consensus 287 g~i~v~~~~~~t~~~~v~a~GD~~~ 311 (369)
T 3d1c_A 287 QDIKLTTHDESTRYPNIFMIGATVE 311 (369)
T ss_dssp SCCCBCTTSBBSSSTTEEECSTTCC
T ss_pred CCEEechhhcccCCCCeEEeccccc
Confidence 1235999999986
No 27
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.97 E-value=5.7e-32 Score=250.23 Aligned_cols=288 Identities=15% Similarity=0.180 Sum_probs=186.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCccccc-ccccchhccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSS-LYKSLRVNLPRELMGF 80 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 80 (354)
+++|+|||||++|+++|..|++.|.+|+|||++ .+||.|.+. +|.|.+.++... .+..+. ........+
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~~--------g~~p~k~l~~~~~~~~~~~-~~~~~g~~~ 72 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNV--------GCIPSKALISASHRYEQAK-HSEEMGIKA 72 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHT--------SHHHHHHHHHHHHHHHHHH-TCGGGTEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcCc--------CchhhHHHHHHHHHHHHHH-HHHhcCccc
Confidence 579999999999999999999999999999997 889998763 566544333221 111111 111000000
Q ss_pred cCCCCCccCCCCCCCCCCCCCH----HHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeC
Q 018550 81 QAYPFVARNYEGSVDLRRYPGH----EEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFD 156 (354)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d 156 (354)
...... ....+... ..+.+.+.+.+++.+++ ++.++.+. + +. +.+.+...++. .++.||
T Consensus 73 ~~~~~~--------~~~~~~~~~~~~~~l~~~~~~~~~~~gv~--~~~g~~~~-i--d~-~~v~V~~~~G~---~~i~~d 135 (455)
T 1ebd_A 73 ENVTID--------FAKVQEWKASVVKKLTGGVEGLLKGNKVE--IVKGEAYF-V--DA-NTVRVVNGDSA---QTYTFK 135 (455)
T ss_dssp CSCEEC--------HHHHHHHHHHHHHHHHHHHHHHHHTTTCE--EEESEEEE-E--ET-TEEEEEETTEE---EEEECS
T ss_pred CCCccC--------HHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEEEEEE-c--cC-CeEEEEeCCCc---EEEEeC
Confidence 000000 00000000 11333445556666777 77766543 3 33 56777665441 478999
Q ss_pred EEEEeeCCCCCcccCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC-----
Q 018550 157 AVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA----- 231 (354)
Q Consensus 157 ~vIlAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~----- 231 (354)
+||+||| +.|+.|+++|.+. ...++....... ..+++++|||+|++|+|+|..|++.|.+|+++++.+.
T Consensus 136 ~lViATG--s~p~~~~~~g~~~---~v~~~~~~~~~~-~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~ 209 (455)
T 1ebd_A 136 NAIIATG--SRPIELPNFKFSN---RILDSTGALNLG-EVPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSGF 209 (455)
T ss_dssp EEEECCC--EEECCBTTBCCCS---SEECHHHHHTCS-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTS
T ss_pred EEEEecC--CCCCCCCCCCccc---eEecHHHHhccc-cCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccccc
Confidence 9999999 7888888877553 234433332222 2469999999999999999999999999999999764
Q ss_pred -----ccccccCCCCC-CeEEecceeEEecCC-c--EEEc---cCcEEecCEEEEcccCCCccCcccc--cCchhhh---
Q 018550 232 -----DETHEKQPGYD-NMWLHSMVERANEDG-T--VVFR---NGRVVSADVIMHCTGLTGTSTTTLF--LKPMALL--- 294 (354)
Q Consensus 232 -----~~~~~~l~~~~-~~~~~~~v~~v~~~~-~--v~~~---~g~~~~~D~vi~a~G~~~~~p~~~~--l~~~~~~--- 294 (354)
+...+.+++.+ +++.++.|+++..++ . +.+. +++++++|.||+|+|++ |++++ ++..+..
T Consensus 210 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~---p~~~~l~~~~~g~~~~~ 286 (455)
T 1ebd_A 210 EKQMAAIIKKRLKKKGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRR---PNTDELGLEQIGIKMTN 286 (455)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCEE---ESCSSSSTTTTTCCBCT
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCCC---cccCcCChhhcCCccCC
Confidence 11222334444 889999999998543 2 3443 45689999999999999 66665 3332211
Q ss_pred -------------hceeeeecccchh------hHHHHHHHhhhccCCCcc
Q 018550 295 -------------LWMTIVLGHCTST------FFRQSWHQAFHLLGYHRR 325 (354)
Q Consensus 295 -------------~~~i~a~GD~~~~------~~~~~~~~~~~~~~~~~~ 325 (354)
..+|||+|||+.. ...|+...+.++.+....
T Consensus 287 ~G~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~~ 336 (455)
T 1ebd_A 287 RGLIEVDQQCRTSVPNIFAIGDIVPGPALAHKASYEGKVAAEAIAGHPSA 336 (455)
T ss_dssp TSCBCCCTTCBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHTSCCCC
T ss_pred CCCEeeCCCcccCCCCEEEEeccCCCcccHHHHHHHHHHHHHHHcCCCcc
Confidence 2349999999873 356777778888775433
No 28
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=99.97 E-value=5.4e-32 Score=248.44 Aligned_cols=264 Identities=16% Similarity=0.195 Sum_probs=180.5
Q ss_pred eEEEEcCChHHHHHHHHHHHcC--CcEEEEeeCCCccce-eecCCCCCCCCCCCCCCCCcccccccccchhccccccccc
Q 018550 4 HVAVIGAGAAGLVVGHELLREG--HTVVVYEKGEQVGGS-WIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGF 80 (354)
Q Consensus 4 ~vvIIG~G~aG~~~a~~l~~~g--~~v~lie~~~~~gg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (354)
+|+|||||+||+++|..|+++| .+|+|||+++..+.. +.. | ....
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l------------~-----------~~~~--------- 49 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCAL------------P-----------YVIG--------- 49 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGGH------------H-----------HHHT---------
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcchh------------H-----------HHHc---------
Confidence 6999999999999999999988 479999997644211 100 0 0000
Q ss_pred cCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEE
Q 018550 81 QAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVV 160 (354)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIl 160 (354)
...... . ..+.....++.++.+++ ++.+++|+.|+... ....+.... .....++.||+||+
T Consensus 50 -~~~~~~--------~------~~~~~~~~~~~~~~~i~--~~~~~~V~~id~~~-~~~~~~~~~-~~~~~~~~yd~lVI 110 (437)
T 4eqs_A 50 -EVVEDR--------R------YALAYTPEKFYDRKQIT--VKTYHEVIAINDER-QTVSVLNRK-TNEQFEESYDKLIL 110 (437)
T ss_dssp -TSSCCG--------G------GTBCCCHHHHHHHHCCE--EEETEEEEEEETTT-TEEEEEETT-TTEEEEEECSEEEE
T ss_pred -CCccch--------h------hhhhcCHHHHHHhcCCE--EEeCCeEEEEEccC-cEEEEEecc-CCceEEEEcCEEEE
Confidence 000000 0 00000112345667888 88999999998644 333333222 22346789999999
Q ss_pred eeCCCCCcccCCCCCCCCCCcceeecccCCCC--CCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC-----cc
Q 018550 161 CNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIP--NPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA-----DE 233 (354)
Q Consensus 161 AtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~--~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~-----~~ 233 (354)
||| ++|+.|++++...+..+.+......+. ....+++++|||+|++|+|+|..+++.|.+|+++++.+. +.
T Consensus 111 ATG--s~p~~p~i~g~~~~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~d~ 188 (437)
T 4eqs_A 111 SPG--ASANSLGFESDITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDA 188 (437)
T ss_dssp CCC--EEECCCCCCCTTEECCSSHHHHHHHHHHHHHHTCCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTTSCG
T ss_pred CCC--CccccccccCceEEeeccHHHHHHHHHhhhccCCcEEEEECCccchhhhHHHHHhcCCcceeeeeeccccccccc
Confidence 999 889999888855432222211111000 112468999999999999999999999999999999875 11
Q ss_pred -----ccccCCCCC-CeEEecceeEEecCCcEEEccCcEEecCEEEEcccCCCccCcccccCchhhhh------------
Q 018550 234 -----THEKQPGYD-NMWLHSMVERANEDGTVVFRNGRVVSADVIMHCTGLTGTSTTTLFLKPMALLL------------ 295 (354)
Q Consensus 234 -----~~~~l~~~~-~~~~~~~v~~v~~~~~v~~~~g~~~~~D~vi~a~G~~~~~p~~~~l~~~~~~~------------ 295 (354)
..+.+++.+ +++.++.|++++.+. +++++|+++++|.|++|+|++ ||+++++..+...
T Consensus 189 ~~~~~~~~~l~~~gV~i~~~~~v~~~~~~~-v~~~~g~~~~~D~vl~a~G~~---Pn~~~~~~~gl~~~~~G~I~vd~~~ 264 (437)
T 4eqs_A 189 DMNQPILDELDKREIPYRLNEEINAINGNE-ITFKSGKVEHYDMIIEGVGTH---PNSKFIESSNIKLDRKGFIPVNDKF 264 (437)
T ss_dssp GGGHHHHHHHHHTTCCEEESCCEEEEETTE-EEETTSCEEECSEEEECCCEE---ESCGGGTTSSCCCCTTSCEECCTTC
T ss_pred hhHHHHHHHhhccceEEEeccEEEEecCCe-eeecCCeEEeeeeEEEEecee---cCcHHHHhhhhhhccCCcEecCCCc
Confidence 222334444 899999999998776 999999999999999999999 8888876554431
Q ss_pred ----ceeeeecccchh----------------hHHHHHHHhhhccCCCc
Q 018550 296 ----WMTIVLGHCTST----------------FFRQSWHQAFHLLGYHR 324 (354)
Q Consensus 296 ----~~i~a~GD~~~~----------------~~~~~~~~~~~~~~~~~ 324 (354)
.+|||+|||+.. ...|+...+.++.|...
T Consensus 265 ~Ts~p~IyA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~g~~~ 313 (437)
T 4eqs_A 265 ETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIAGNDT 313 (437)
T ss_dssp BCSSTTEEECGGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHHHHSCTT
T ss_pred cCCCCCEEEEEEccCcccccCCccccchhHHHHHHHHHHHHHHHcCCCC
Confidence 239999999752 34677778888877654
No 29
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=99.97 E-value=3.4e-32 Score=248.20 Aligned_cols=275 Identities=18% Similarity=0.184 Sum_probs=188.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCc--EEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhccccccc
Q 018550 1 MFRHVAVIGAGAAGLVVGHELLREGHT--VVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELM 78 (354)
Q Consensus 1 ~~~~vvIIG~G~aG~~~a~~l~~~g~~--v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (354)
|+++|+|||||++|+++|..|+++|++ |+|||+++.++..... +.........
T Consensus 1 M~~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~~-------------------------l~~~~~~g~~ 55 (410)
T 3ef6_A 1 MATHVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPS-------------------------LSKAVLDGSL 55 (410)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSGG-------------------------GGTHHHHTSS
T ss_pred CCCCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCcc-------------------------ccHHHhCCCC
Confidence 678999999999999999999999987 9999997654211000 0000000000
Q ss_pred cccCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEE
Q 018550 79 GFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAV 158 (354)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~v 158 (354)
.... + ....++..+.+++ ++.+++|+.++.. .+++.+.++. ++.||+|
T Consensus 56 ~~~~----------------------~-~~~~~~~~~~~i~--~~~~~~v~~id~~---~~~v~~~~g~----~~~~d~l 103 (410)
T 3ef6_A 56 ERPP----------------------I-LAEADWYGEARID--MLTGPEVTALDVQ---TRTISLDDGT----TLSADAI 103 (410)
T ss_dssp SSCC----------------------B-SSCTTHHHHTTCE--EEESCCEEEEETT---TTEEEETTSC----EEECSEE
T ss_pred CHHH----------------------h-cCCHHHHHHCCCE--EEeCCEEEEEECC---CCEEEECCCC----EEECCEE
Confidence 0000 0 0112234556888 8999999999763 4577777764 8999999
Q ss_pred EEeeCCCCCcccCCCCCCCCCCcceeecccCC-----CCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC--
Q 018550 159 VVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYR-----IPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA-- 231 (354)
Q Consensus 159 IlAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~-----~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~-- 231 (354)
|+||| +.|+.|+++|.+.. ...+..... ......+++++|||+|.+|+|+|..|.+.|.+|+++++.+.
T Consensus 104 vlAtG--~~p~~~~ipG~~~~--~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l 179 (410)
T 3ef6_A 104 VIATG--SRARTMALPGSQLP--GVVTLRTYGDVQVLRDSWTSATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELL 179 (410)
T ss_dssp EECCC--EEECCCCCTTTTST--TEECCCSHHHHHHHHHHCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred EEccC--CcccCCCCCCcccc--ceEEeccHHHHHHHHHHhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc
Confidence 99999 78999999886531 222211111 01123579999999999999999999999999999999874
Q ss_pred ---------ccccccCCCCC-CeEEecceeEEecCCc---EEEccCcEEecCEEEEcccCCCccCcccccCchhhh----
Q 018550 232 ---------DETHEKQPGYD-NMWLHSMVERANEDGT---VVFRNGRVVSADVIMHCTGLTGTSTTTLFLKPMALL---- 294 (354)
Q Consensus 232 ---------~~~~~~l~~~~-~~~~~~~v~~v~~~~~---v~~~~g~~~~~D~vi~a~G~~~~~p~~~~l~~~~~~---- 294 (354)
+...+.+++.+ +++.++.|+++..++. |++++|+++++|.||+|+|+. |++++++..+..
T Consensus 180 ~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~~---p~~~l~~~~gl~~~~g 256 (410)
T 3ef6_A 180 VRVLGRRIGAWLRGLLTELGVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGAE---PADQLARQAGLACDRG 256 (410)
T ss_dssp HHHHCHHHHHHHHHHHHHHTCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCEE---ECCHHHHHTTCCBSSS
T ss_pred hhhcCHHHHHHHHHHHHHCCCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCCe---ecHHHHHhCCCccCCe
Confidence 11222334444 8899999999986543 888899999999999999999 777776544322
Q ss_pred ----------hceeeeecccch---------------hhHHHHHHHhhhccCCCcccccCCCCCccccCC
Q 018550 295 ----------LWMTIVLGHCTS---------------TFFRQSWHQAFHLLGYHRRLSLSPSLNSRASGL 339 (354)
Q Consensus 295 ----------~~~i~a~GD~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (354)
..+|||+|||+. ....|+...|.++.|....+...|.+++..+++
T Consensus 257 i~vd~~~~t~~~~IyA~GD~a~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~p~~~~~~~~~ 326 (410)
T 3ef6_A 257 VIVDHCGATLAKGVFAVGDVASWPLRAGGRRSLETYMNAQRQAAAVAAAILGKNVSAPQLPVSWTEIAGH 326 (410)
T ss_dssp EECCTTSBCSSTTEEECGGGEEEEBTTSSEECCCCHHHHHHHHHHHHHHHTTCCCCCCBCCEEEEEETTE
T ss_pred EEEccCeeECCCCEEEEEcceeccCCCCCeeeechHHHHHHHHHHHHHHHcCCCCCCCCCCeeEEEECCc
Confidence 245999999975 234667777888887665444434444444444
No 30
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.97 E-value=2.5e-31 Score=236.43 Aligned_cols=248 Identities=21% Similarity=0.289 Sum_probs=180.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
+++|+|||||++|+++|..|++.|++|+|||+. .+||.|....... .++
T Consensus 14 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~~~------------------------------~~~ 62 (335)
T 2a87_A 14 VRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGALMTTTDVE------------------------------NYP 62 (335)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGGGSCSCBC------------------------------CST
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCceeccchhh------------------------------hcC
Confidence 478999999999999999999999999999975 6787776521100 000
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEE-EEeecCCceEEEEeCEEEE
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKV-KSRKKDDVVEEETFDAVVV 160 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v-~~~~g~~~~~~~~~d~vIl 160 (354)
.++. .....++.+++.+.+.+++++ +++++ +.+++. . +.|++ .+.++. ++.||+||+
T Consensus 63 ~~~~-------------~~~~~~~~~~l~~~~~~~~v~--~~~~~-v~~i~~-~-~~~~v~~~~~g~----~~~~d~lvi 120 (335)
T 2a87_A 63 GFRN-------------GITGPELMDEMREQALRFGAD--LRMED-VESVSL-H-GPLKSVVTADGQ----THRARAVIL 120 (335)
T ss_dssp TCTT-------------CBCHHHHHHHHHHHHHHTTCE--EECCC-EEEEEC-S-SSSEEEEETTSC----EEEEEEEEE
T ss_pred CCCC-------------CCCHHHHHHHHHHHHHHcCCE--EEEee-EEEEEe-C-CcEEEEEeCCCC----EEEeCEEEE
Confidence 1110 012377888999988888888 88876 888887 4 67888 665553 799999999
Q ss_pred eeCCCCCcccCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC----ccccc
Q 018550 161 CNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA----DETHE 236 (354)
Q Consensus 161 AtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~----~~~~~ 236 (354)
||| +.++.|+++|...+.+..++.....+.....+++++|||+|.+|+|+|..|++.+.+|+++++++. +...+
T Consensus 121 AtG--~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~~~~~~~ 198 (335)
T 2a87_A 121 AMG--AAARYLQVPGEQELLGRGVSSCATCDGFFFRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRASKIMLD 198 (335)
T ss_dssp CCC--EEECCCCCTHHHHTBTTTEESCHHHHGGGGTTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSSCTTHHH
T ss_pred CCC--CCccCCCCCchHhccCCceEEeeccchhhcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCccHHHHH
Confidence 999 778888888765543344443322222234679999999999999999999999999999998874 11222
Q ss_pred cC-CCCC-CeEEecceeEEecCCc---EEEc---cC--cEEecCEEEEcccCCCccCcccccCc-hhh------------
Q 018550 237 KQ-PGYD-NMWLHSMVERANEDGT---VVFR---NG--RVVSADVIMHCTGLTGTSTTTLFLKP-MAL------------ 293 (354)
Q Consensus 237 ~l-~~~~-~~~~~~~v~~v~~~~~---v~~~---~g--~~~~~D~vi~a~G~~~~~p~~~~l~~-~~~------------ 293 (354)
++ ++.+ +++.++.|+++..++. +.++ +| +++++|.||+|+|++ |++++++. ...
T Consensus 199 ~~~~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~---p~~~~~~~~l~~~~~G~i~vd~~~ 275 (335)
T 2a87_A 199 RARNNDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIGHE---PRSGLVREAIDVDPDGYVLVQGRT 275 (335)
T ss_dssp HHHHCTTEEEECSEEEEEEECSSSCCEEEEEEETTSCCEEECCSCEEECSCEE---ECCTTTBTTBCBCTTSCBCCSTTS
T ss_pred HHhccCCcEEEeCceeEEEecCCcEeEEEEEEcCCCceEEeecCEEEEccCCc---cChhHhhcccccCCCccEEeCCCC
Confidence 32 3344 8888999999986653 6665 35 578999999999999 66666541 111
Q ss_pred ---hhceeeeecccchh
Q 018550 294 ---LLWMTIVLGHCTST 307 (354)
Q Consensus 294 ---~~~~i~a~GD~~~~ 307 (354)
...+|||+|||+..
T Consensus 276 ~~t~~~~iya~GD~~~~ 292 (335)
T 2a87_A 276 TSTSLPGVFAAGDLVDR 292 (335)
T ss_dssp SBCSSTTEEECGGGTCC
T ss_pred CccCCCCEEEeeecCCc
Confidence 12359999999874
No 31
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.97 E-value=2.4e-31 Score=233.33 Aligned_cols=250 Identities=15% Similarity=0.177 Sum_probs=173.7
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhccccccccccC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (354)
+||+||||||||++||..|++.|++|+|||++ .+||.+..+ | + .+..
T Consensus 7 yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~-~~gg~~~~~---------------------~-------~----~~~~ 53 (304)
T 4fk1_A 7 IDCAVIGAGPAGLNASLVLGRARKQIALFDNN-TNRNRVTQN---------------------S-------H----GFIT 53 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECS-CCGGGGSSC---------------------B-------C----CSTT
T ss_pred cCEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCCeeeee---------------------c-------C----CccC
Confidence 79999999999999999999999999999996 456554331 0 0 0001
Q ss_pred CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEee
Q 018550 83 YPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCN 162 (354)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlAt 162 (354)
.+. ....++.+...+.+.+++.. ...+..+..+...+.+.+++.+.++. ++.||+||+||
T Consensus 54 ~~~--------------~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~g~----~~~a~~liiAT 113 (304)
T 4fk1_A 54 RDG--------------IKPEEFKEIGLNEVMKYPSV--HYYEKTVVMITKQSTGLFEIVTKDHT----KYLAERVLLAT 113 (304)
T ss_dssp CTT--------------BCHHHHHHHHHHHHTTSTTE--EEEECCEEEEEECTTSCEEEEETTCC----EEEEEEEEECC
T ss_pred CCC--------------CCHHHHHHHHHHHHHhcCCE--EEEeeEEEEeeecCCCcEEEEECCCC----EEEeCEEEEcc
Confidence 110 11256666666555555544 34556677777655477888888775 89999999999
Q ss_pred CCCCCcccCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCC-CHHHHHHHHhccCCEEEEEEecCC--ccccccCC
Q 018550 163 GHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYA-SGLDIKRDLAGFAKEVHIASRSVA--DETHEKQP 239 (354)
Q Consensus 163 G~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~-~g~e~a~~l~~~g~~v~~~~r~~~--~~~~~~l~ 239 (354)
| +.|+.|+++|.+.+.+..+..+...+....++++++|||||. .++|+|..+.+.+++|+++.+.+. +...+++.
T Consensus 114 G--s~p~~p~i~G~~~~~~~~v~~~~~~~~~~~~~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~~~~~~~~~l~ 191 (304)
T 4fk1_A 114 G--MQEEFPSIPNVREYYGKSLFSCPYCDGWELKDQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGNELSQTIMDELS 191 (304)
T ss_dssp C--CEEECCSCTTHHHHBTTTEESCHHHHSGGGTTSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCCCCHHHHHHHH
T ss_pred C--CccccccccCccccccceeeeccccchhHhcCCceeeecCCCchhhhHHHHHHhCCceEEEEeccccchhhhhhhhh
Confidence 9 899999999977655555554444444445678888888886 567888888889999999988765 33344455
Q ss_pred CCC-CeEEecceeEEecCC-c---EEEccCcEEecCEEEEcccCCCccCcccccCchhhh----------------hcee
Q 018550 240 GYD-NMWLHSMVERANEDG-T---VVFRNGRVVSADVIMHCTGLTGTSTTTLFLKPMALL----------------LWMT 298 (354)
Q Consensus 240 ~~~-~~~~~~~v~~v~~~~-~---v~~~~g~~~~~D~vi~a~G~~~~~p~~~~l~~~~~~----------------~~~i 298 (354)
+.+ .++. ..++.+..++ . |.+.+|+++++|.+++++|.. |+++++...+.. ..+|
T Consensus 192 ~~g~~~~~-~~v~~~~~~~~~~~~v~~~~g~~i~~~~~vi~~g~~---~~~~~~~~~g~~~~~~G~I~vd~~~~Ts~p~I 267 (304)
T 4fk1_A 192 NKNIPVIT-ESIRTLQGEGGYLKKVEFHSGLRIERAGGFIVPTFF---RPNQFIEQLGCELQSNGTFVIDDFGRTSEKNI 267 (304)
T ss_dssp TTTCCEEC-SCEEEEESGGGCCCEEEETTSCEECCCEEEECCEEE---CSSCHHHHTTCCCCTTSSSCSSTTCBCSSTTE
T ss_pred ccceeEee-eeEEEeecCCCeeeeeeccccceeeecceeeeeccc---cCChhhhhcCeEECCCCCEEECcCCccCCCCE
Confidence 555 5544 4567776433 2 788999999999988888877 444555443322 2349
Q ss_pred eeecccchhhHHH
Q 018550 299 IVLGHCTSTFFRQ 311 (354)
Q Consensus 299 ~a~GD~~~~~~~~ 311 (354)
||+|||+.....|
T Consensus 268 yA~GDv~~~~~~~ 280 (304)
T 4fk1_A 268 YLAGETTTQGPSS 280 (304)
T ss_dssp EECSHHHHTSCCC
T ss_pred EEEeccCCCcchH
Confidence 9999999754433
No 32
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.97 E-value=6.7e-32 Score=251.02 Aligned_cols=283 Identities=15% Similarity=0.143 Sum_probs=186.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccc-cccchh-cccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSL-YKSLRV-NLPRELMG 79 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~ 79 (354)
+++|+|||||++|+++|..|++.|++|+|||+++.+||.|.+. +|.|.+.++.... +..+.. ... .++
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~--------g~~Psk~l~~~~~~~~~~~~~~~~--~~g 75 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNV--------GCIPSKALLNNSHYYHMAHGTDFA--SRG 75 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHH--------SHHHHHHHHHHHHHHHHHHSSHHH--HTT
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCccccc--------CccchHHHHHHHHHHHHhhhhhHh--hCc
Confidence 4789999999999999999999999999999988999999873 5665543332211 111110 000 001
Q ss_pred ccCCCCCccCCCCCCCCCCCCCHHHHH-----------HHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCC
Q 018550 80 FQAYPFVARNYEGSVDLRRYPGHEEVL-----------RYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDD 148 (354)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~ 148 (354)
+. .. ....++..+. ..+.+.+++.+++ ++.+.. ..+ +. +.+.+.+.++.
T Consensus 76 ~~-----~~--------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~--~~~g~~-~~~--~~-~~~~v~~~~gg- 135 (474)
T 1zmd_A 76 IE-----MS--------EVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVV--HVNGYG-KIT--GK-NQVTATKADGG- 135 (474)
T ss_dssp EE-----ES--------CEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEESEE-EEE--ET-TEEEEECTTSC-
T ss_pred cc-----cC--------CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEEEE-EEe--cC-CEEEEEecCCC-
Confidence 10 00 0000112222 2234555667887 777653 333 33 56667655421
Q ss_pred ceEEEEeCEEEEeeCCCCCcccCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEe
Q 018550 149 VVEEETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASR 228 (354)
Q Consensus 149 ~~~~~~~d~vIlAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r 228 (354)
..++.||+||+||| +.|+.|+++|.+.. ..+++.+...... .+++++|||+|++|+|+|..|++.|.+|+++++
T Consensus 136 -~~~~~~d~lViAtG--s~p~~p~i~g~~~~--~v~t~~~~~~~~~-~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~ 209 (474)
T 1zmd_A 136 -TQVIDTKNILIATG--SEVTPFPGITIDED--TIVSSTGALSLKK-VPEKMVVIGAGVIGVELGSVWQRLGADVTAVEF 209 (474)
T ss_dssp -EEEEEEEEEEECCC--EEECCCTTCCCCSS--SEECHHHHTTCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred -cEEEEeCEEEECCC--CCCCCCCCCCCCcC--cEEcHHHHhhccc-cCceEEEECCCHHHHHHHHHHHHcCCEEEEEec
Confidence 24799999999999 78888888886541 2444443333222 469999999999999999999999999999998
Q ss_pred cCC--c---------cccccCCCCC-CeEEecceeEEecCC-c-EEE-------ccCcEEecCEEEEcccCCCccCcccc
Q 018550 229 SVA--D---------ETHEKQPGYD-NMWLHSMVERANEDG-T-VVF-------RNGRVVSADVIMHCTGLTGTSTTTLF 287 (354)
Q Consensus 229 ~~~--~---------~~~~~l~~~~-~~~~~~~v~~v~~~~-~-v~~-------~~g~~~~~D~vi~a~G~~~~~p~~~~ 287 (354)
.+. . ...+.+++.+ +++.++.|+++..++ . +.+ .+++++++|.||+|+|++ |++++
T Consensus 210 ~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~---p~~~~ 286 (474)
T 1zmd_A 210 LGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRR---PFTKN 286 (474)
T ss_dssp SSSSSCSSCCHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEE---ECCTT
T ss_pred cCccCCcccCHHHHHHHHHHHHHCCCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCC---cCCCc
Confidence 764 1 1122233444 889999999998543 2 332 245789999999999999 77765
Q ss_pred c--Cchhhh----------------hceeeeecccchh------hHHHHHHHhhhccCCC
Q 018550 288 L--KPMALL----------------LWMTIVLGHCTST------FFRQSWHQAFHLLGYH 323 (354)
Q Consensus 288 l--~~~~~~----------------~~~i~a~GD~~~~------~~~~~~~~~~~~~~~~ 323 (354)
+ +..+.. ..+|||+|||+.. ...|+...+.++.+..
T Consensus 287 l~l~~~g~~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~~ 346 (474)
T 1zmd_A 287 LGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGGA 346 (474)
T ss_dssp SSHHHHTCCCCTTSCCCCCTTCBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHTTCC
T ss_pred CCchhcCCccCCCCCEEECcCCccCCCCEEEeeecCCCCccHHHHHHHHHHHHHHhcCCC
Confidence 3 222211 2349999999873 3567777888887654
No 33
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.97 E-value=2.5e-31 Score=248.60 Aligned_cols=287 Identities=16% Similarity=0.184 Sum_probs=188.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHc---CCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccc
Q 018550 1 MFRHVAVIGAGAAGLVVGHELLRE---GHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPREL 77 (354)
Q Consensus 1 ~~~~vvIIG~G~aG~~~a~~l~~~---g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (354)
|+++|+|||||++|+++|..|++. |.+|+|||+++ +||+|.+. +|.|.+.++..............
T Consensus 1 M~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~--------g~~psk~l~~~a~~~~~~~~~~~-- 69 (499)
T 1xdi_A 1 MVTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLD--------DCVPSKTFIASTGLRTELRRAPH-- 69 (499)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHT--------SHHHHHHHHHHHHHHHHHTTTTT--
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCc--------CccchHHHHHHHHHHHHHHHHHh--
Confidence 678999999999999999999999 99999999987 99998873 55554433332211111111110
Q ss_pred ccccCCCCCccCCCCCCCCCCCCCHHH-----------HHHHHHHHHHHhCCcceEEeceEEEEEEEe---CCCcEEEEE
Q 018550 78 MGFQAYPFVARNYEGSVDLRRYPGHEE-----------VLRYLQNFAREFGVDQVVRLHTEVLNARLV---ESNKWKVKS 143 (354)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~---~~~~~~v~~ 143 (354)
+++..+ .. ....++.. +..++.+.+++.+++ ++.+. +..++.. +++.+.+..
T Consensus 70 ~g~~~~---~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~--~~~g~-~~~i~~~~~~~~~~~~V~~ 135 (499)
T 1xdi_A 70 LGFHID---FD--------DAKISLPQIHARVKTLAAAQSADITAQLLSMGVQ--VIAGR-GELIDSTPGLARHRIKATA 135 (499)
T ss_dssp TTBC-----------------CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEESE-EEECCSSSCCSSEEEEEEC
T ss_pred CCCccc---cC--------CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEeE-EEEecCcccCCCCEEEEEe
Confidence 011000 00 00011232 333345666677887 77764 5555431 002344444
Q ss_pred eecCCceEEEEeCEEEEeeCCCCCcccCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCCEE
Q 018550 144 RKKDDVVEEETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEV 223 (354)
Q Consensus 144 ~~g~~~~~~~~~d~vIlAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v 223 (354)
.++ ....+.||+||+||| +.|+.|+++|.+.. ..+++....... ..+++++|||+|.+|+|+|..+.+.|.+|
T Consensus 136 ~~g--~~~~~~~d~lviATG--s~p~~p~i~g~~~~--~v~~~~~~~~~~-~~~~~vvViGgG~ig~E~A~~l~~~g~~V 208 (499)
T 1xdi_A 136 ADG--STSEHEADVVLVATG--ASPRILPSAQPDGE--RILTWRQLYDLD-ALPDHLIVVGSGVTGAEFVDAYTELGVPV 208 (499)
T ss_dssp TTS--CEEEEEESEEEECCC--EEECCCGGGCCCSS--SEEEGGGGGGCS-SCCSSEEEESCSHHHHHHHHHHHHTTCCE
T ss_pred CCC--cEEEEEeCEEEEcCC--CCCCCCCCCCCCcC--cEEehhHhhhhh-ccCCeEEEECCCHHHHHHHHHHHHcCCeE
Confidence 333 123789999999999 88888888886542 234444433322 25689999999999999999999999999
Q ss_pred EEEEecCC----------ccccccCCCCC-CeEEecceeEEecCC-c--EEEccCcEEecCEEEEcccCCCccCcccc--
Q 018550 224 HIASRSVA----------DETHEKQPGYD-NMWLHSMVERANEDG-T--VVFRNGRVVSADVIMHCTGLTGTSTTTLF-- 287 (354)
Q Consensus 224 ~~~~r~~~----------~~~~~~l~~~~-~~~~~~~v~~v~~~~-~--v~~~~g~~~~~D~vi~a~G~~~~~p~~~~-- 287 (354)
+++.+.+. ....+.+++.+ +++.++.|+++..++ . +.+.+|+++++|.||+|+|++ |++++
T Consensus 209 tlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~---p~~~~l~ 285 (499)
T 1xdi_A 209 TVVASQDHVLPYEDADAALVLEESFAERGVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSV---PNTSGLG 285 (499)
T ss_dssp EEECSSSSSSCCSSHHHHHHHHHHHHHTTCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEE---ECCSSSC
T ss_pred EEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCC---cCCCcCC
Confidence 99999864 11222334445 889999999998654 2 455677899999999999999 77766
Q ss_pred cCchhhh----------------hceeeeecccchh------hHHHHHHHhhhccCC
Q 018550 288 LKPMALL----------------LWMTIVLGHCTST------FFRQSWHQAFHLLGY 322 (354)
Q Consensus 288 l~~~~~~----------------~~~i~a~GD~~~~------~~~~~~~~~~~~~~~ 322 (354)
++..+.. ..+|||+|||+.. ...|+...+.++.+.
T Consensus 286 l~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~ 342 (499)
T 1xdi_A 286 LERVGIQLGRGNYLTVDRVSRTLATGIYAAGDCTGLLPLASVAAMQGRIAMYHALGE 342 (499)
T ss_dssp TTTTTCCCBTTTBCCCCSSSBCSSTTEEECSGGGTSCSCHHHHHHHHHHHHHHHTTC
T ss_pred chhcCceECCCCCEEECCCcccCCCCEEEEeccCCCcccHHHHHHHHHHHHHHhcCC
Confidence 4332221 2349999999873 356777778888775
No 34
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.97 E-value=7.2e-32 Score=250.42 Aligned_cols=287 Identities=16% Similarity=0.160 Sum_probs=188.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCccccc-ccccchhcccccccc
Q 018550 1 MFRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSS-LYKSLRVNLPRELMG 79 (354)
Q Consensus 1 ~~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 79 (354)
|+++|+|||||++|+++|..|++.|++|+|||+++.+||+|.+. +|.|.+.++... .+..+...... ++
T Consensus 1 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~--------g~~psk~l~~~~~~~~~~~~~~~~--~g 70 (468)
T 2qae_A 1 NPYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNV--------GCIPSKALLHATHLYHDAHANFAR--YG 70 (468)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHH--------SHHHHHHHHHHHHHHHHHHHTHHH--HT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCc--------CcHhHHHHHHHHHHHHHHHHHHHh--cC
Confidence 57899999999999999999999999999999988999999873 555544333221 11111110000 00
Q ss_pred ccCCCCCccCCCCCCCCCCCCCHHH-----------HHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCC
Q 018550 80 FQAYPFVARNYEGSVDLRRYPGHEE-----------VLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDD 148 (354)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~ 148 (354)
+. ... ....++.. +...+.+.+++.+++ ++.++.+ .+ +. +.+.+...+|.
T Consensus 71 ~~---~~~---------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~--~~~g~~~-~i--~~-~~~~v~~~~G~- 131 (468)
T 2qae_A 71 LM---GGE---------GVTMDSAKMQQQKERAVKGLTGGVEYLFKKNKVT--YYKGEGS-FE--TA-HSIRVNGLDGK- 131 (468)
T ss_dssp EE---CGG---------GCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCE--EEEEEEE-EE--ET-TEEEEEETTSC-
T ss_pred cc---cCC---------CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEEEEE-Ee--eC-CEEEEEecCCc-
Confidence 00 000 00001122 223345556667887 7765543 33 33 55666654442
Q ss_pred ceEEEEeCEEEEeeCCCCCcccCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEe
Q 018550 149 VVEEETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASR 228 (354)
Q Consensus 149 ~~~~~~~d~vIlAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r 228 (354)
..++.||+||+||| +.|+.|+++|.+.. .++++.+..... ..+++++|||+|.+|+|+|..|++.|.+|+++++
T Consensus 132 -~~~~~~d~lviAtG--~~p~~p~~~g~~~~--~v~t~~~~~~~~-~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~ 205 (468)
T 2qae_A 132 -QEMLETKKTIIATG--SEPTELPFLPFDEK--VVLSSTGALALP-RVPKTMVVIGGGVIGLELGSVWARLGAEVTVVEF 205 (468)
T ss_dssp -EEEEEEEEEEECCC--EEECCBTTBCCCSS--SEECHHHHHTCS-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred -eEEEEcCEEEECCC--CCcCCCCCCCCCcC--ceechHHHhhcc-cCCceEEEECCCHHHHHHHHHHHHhCCEEEEEec
Confidence 24799999999999 78888888776531 234433332222 2579999999999999999999999999999999
Q ss_pred cCC----------ccccccC-CCCC-CeEEecceeEEecCC-c--EEEc--cC--cEEecCEEEEcccCCCccCccccc-
Q 018550 229 SVA----------DETHEKQ-PGYD-NMWLHSMVERANEDG-T--VVFR--NG--RVVSADVIMHCTGLTGTSTTTLFL- 288 (354)
Q Consensus 229 ~~~----------~~~~~~l-~~~~-~~~~~~~v~~v~~~~-~--v~~~--~g--~~~~~D~vi~a~G~~~~~p~~~~l- 288 (354)
.+. +...+.+ ++.+ +++.++.|++++.++ . +.++ +| +++++|.||+|+|++ |+++++
T Consensus 206 ~~~~l~~~d~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~---p~~~~l~ 282 (468)
T 2qae_A 206 APRCAPTLDEDVTNALVGALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRR---PFTGGLG 282 (468)
T ss_dssp SSSSSTTSCHHHHHHHHHHHHHHTCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCEE---ECCTTSC
T ss_pred CCcccccCCHHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCcc---cCCCCCC
Confidence 864 1123334 4445 889999999998654 2 4554 66 679999999999999 777663
Q ss_pred -Cchhhh----------------hceeeeecccch-h------hHHHHHHHhhhccCCCcc
Q 018550 289 -KPMALL----------------LWMTIVLGHCTS-T------FFRQSWHQAFHLLGYHRR 325 (354)
Q Consensus 289 -~~~~~~----------------~~~i~a~GD~~~-~------~~~~~~~~~~~~~~~~~~ 325 (354)
+..+.. ..+|||+|||+. . ...|+...+.++.+....
T Consensus 283 l~~~gl~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~~~~~~ 343 (468)
T 2qae_A 283 LDKINVAKNERGFVKIGDHFETSIPDVYAIGDVVDKGPMLAHKAEDEGVACAEILAGKPGH 343 (468)
T ss_dssp HHHHTCCBCTTSCBCCCTTSBCSSTTEEECGGGBSSSCSCHHHHHHHHHHHHHHHTTCCCC
T ss_pred chhcCCccCCCCCEeECCCcccCCCCEEEeeccCCCCCccHhHHHHHHHHHHHHHcCCCcc
Confidence 222111 234999999988 2 356777778888775433
No 35
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.97 E-value=6.9e-31 Score=233.46 Aligned_cols=248 Identities=17% Similarity=0.232 Sum_probs=179.4
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEee----CCCccceeecCCCCCCCCCCCCCCCCcccccccccchhccccccc
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEK----GEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELM 78 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~----~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (354)
++|+|||||++|+++|..|++.|++|+|||+ ...+|+.+..... ..
T Consensus 9 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~------------------------------~~ 58 (333)
T 1vdc_A 9 TRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTD------------------------------VE 58 (333)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSE------------------------------EC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeeccc------------------------------cc
Confidence 6899999999999999999999999999998 4455655544210 00
Q ss_pred cccCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEE
Q 018550 79 GFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAV 158 (354)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~v 158 (354)
.++.++. .....++.+++.+.+.+.+++ ++.++ |.+++..+ +.|++++ ++ .++.+|+|
T Consensus 59 ~~~~~~~-------------~~~~~~~~~~l~~~~~~~gv~--~~~~~-v~~i~~~~-~~~~v~~-~~----~~~~~~~v 116 (333)
T 1vdc_A 59 NFPGFPE-------------GILGVELTDKFRKQSERFGTT--IFTET-VTKVDFSS-KPFKLFT-DS----KAILADAV 116 (333)
T ss_dssp CSTTCTT-------------CEEHHHHHHHHHHHHHHTTCE--EECCC-CCEEECSS-SSEEEEC-SS----EEEEEEEE
T ss_pred cCCCCcc-------------CCCHHHHHHHHHHHHHHCCCE--EEEeE-EEEEEEcC-CEEEEEE-CC----cEEEcCEE
Confidence 0111110 012367888898888888988 88876 88888766 6788877 43 37999999
Q ss_pred EEeeCCCCCcccCCCCCCCC----CCcceeecccCCCCCC--CCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC-
Q 018550 159 VVCNGHFSVPRLAQVPGIDS----WPGKQMHSHNYRIPNP--FQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA- 231 (354)
Q Consensus 159 IlAtG~~s~~~~p~~~g~~~----~~~~~~~~~~~~~~~~--~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~- 231 (354)
|+||| +.++.|.++|... +.+..++.....+... ..+++++|||+|.+|+|+|..|.+.+.+|+++++++.
T Consensus 117 v~A~G--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~ 194 (333)
T 1vdc_A 117 ILAIG--AVAKRLSFVGSGEVLGGFWNRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAF 194 (333)
T ss_dssp EECCC--EEECCCCCBTCSSSSSCCBTTTEESCHHHHTTSGGGTTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred EECCC--CCcCCCCCCCccccccccccCcEEEeccCccchhhcCCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcC
Confidence 99999 6788888888765 3333444332222222 4679999999999999999999999999999999875
Q ss_pred ---ccccccC-CCCC-CeEEecceeEEecCC---c---EEEc---cC--cEEecCEEEEcccCCCccCcccccCc-hh--
Q 018550 232 ---DETHEKQ-PGYD-NMWLHSMVERANEDG---T---VVFR---NG--RVVSADVIMHCTGLTGTSTTTLFLKP-MA-- 292 (354)
Q Consensus 232 ---~~~~~~l-~~~~-~~~~~~~v~~v~~~~---~---v~~~---~g--~~~~~D~vi~a~G~~~~~p~~~~l~~-~~-- 292 (354)
+...+++ ++.+ +++.++.|+++..++ . |.++ +| +++++|.||+|+|++ |++++++. ..
T Consensus 195 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~---p~~~~~~~~l~~~ 271 (333)
T 1vdc_A 195 RASKIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHE---PATKFLDGGVELD 271 (333)
T ss_dssp CSCHHHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEE---ESCGGGTTSSCBC
T ss_pred CccHHHHHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCc---cchHHhhcccccc
Confidence 1222233 4445 888899999998654 2 6665 35 578999999999999 66666541 11
Q ss_pred -------------hhhceeeeecccchh
Q 018550 293 -------------LLLWMTIVLGHCTST 307 (354)
Q Consensus 293 -------------~~~~~i~a~GD~~~~ 307 (354)
....+|||+|||+..
T Consensus 272 ~~G~i~vd~~~~~t~~~~vya~GD~~~~ 299 (333)
T 1vdc_A 272 SDGYVVTKPGTTQTSVPGVFAAGDVQDK 299 (333)
T ss_dssp TTSCBCCCTTSCBCSSTTEEECGGGGCS
T ss_pred CCCCEEechhhcccCCCCEEEeeeccCC
Confidence 012359999999874
No 36
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.97 E-value=6.8e-32 Score=250.25 Aligned_cols=273 Identities=17% Similarity=0.169 Sum_probs=183.3
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhccccccccccC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (354)
+||+|||||++|+++|..|++.|.+|+|||+.+.+||+|.+. +|.|.+.+.............+.
T Consensus 5 ~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~--------gciPsk~l~~~a~~~~~~~~~~~------- 69 (466)
T 3l8k_A 5 YDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYS--------GCVPSKTVREVIQTAWRLTNIAN------- 69 (466)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHH--------SHHHHHHHHHHHHHHHHHHHHHC-------
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCccccc--------CCCchHHHHHHHHHHHHHHhccc-------
Confidence 699999999999999999999999999999888999999874 66665544333222111111110
Q ss_pred CCCCccCCCCCCCCCCCCCHHHHH------------HHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCce
Q 018550 83 YPFVARNYEGSVDLRRYPGHEEVL------------RYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVV 150 (354)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~------------~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~ 150 (354)
.. ...++..+. .++.....+.+++ +.. .++..++ . +.+.+...++. .
T Consensus 70 ~~-------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~--~~~-g~v~~id--~-~~~~V~~~~g~--~ 128 (466)
T 3l8k_A 70 VK-------------IPLDFSTVQDRKDYVQELRFKQHKRNMSQYETLT--FYK-GYVKIKD--P-THVIVKTDEGK--E 128 (466)
T ss_dssp SC-------------CCCCHHHHHHHHHHHHHHHHHHHHHHHTTCTTEE--EES-EEEEEEE--T-TEEEEEETTSC--E
T ss_pred CC-------------CCcCHHHHHHHHHhheeccccchHHHHHHhCCCE--EEE-eEEEEec--C-CeEEEEcCCCc--E
Confidence 00 001112222 2222222333444 544 3566665 3 56777766553 2
Q ss_pred EEEEeCEEEEeeCCCCCcccCCCCCCCCCCcceeecccCC---CCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEE
Q 018550 151 EEETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYR---IPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIAS 227 (354)
Q Consensus 151 ~~~~~d~vIlAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~---~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~ 227 (354)
.++.||+||+||| +.|+.|+++|.+. ..+...+. ......+++++|||+|++|+|+|..|++.|.+|+++.
T Consensus 129 ~~~~~d~lviAtG--~~p~~p~i~G~~~----~~t~~~~~~~~~~l~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~ 202 (466)
T 3l8k_A 129 IEAETRYMIIASG--AETAKLRLPGVEY----CLTSDDIFGYKTSFRKLPQDMVIIGAGYIGLEIASIFRLMGVQTHIIE 202 (466)
T ss_dssp EEEEEEEEEECCC--EEECCCCCTTGGG----SBCHHHHHSTTCSCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEecCEEEECCC--CCccCCCCCCccc----eEeHHHHHHHHHHHhhCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEE
Confidence 2399999999999 8999999998762 22222211 1122357999999999999999999999999999999
Q ss_pred ecCC------cc-cc----ccCCCCCCeEEecceeEEecCC--c--EEEc--cCc--EEecCEEEEcccCCCccCcccc-
Q 018550 228 RSVA------DE-TH----EKQPGYDNMWLHSMVERANEDG--T--VVFR--NGR--VVSADVIMHCTGLTGTSTTTLF- 287 (354)
Q Consensus 228 r~~~------~~-~~----~~l~~~~~~~~~~~v~~v~~~~--~--v~~~--~g~--~~~~D~vi~a~G~~~~~p~~~~- 287 (354)
+.+. +. .. +.+. .+++.++.|+++..++ . +.++ +|+ ++++|.|++|+|++ |++++
T Consensus 203 ~~~~~l~~~~d~~~~~~l~~~l~--v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~---p~~~l~ 277 (466)
T 3l8k_A 203 MLDRALITLEDQDIVNTLLSILK--LNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGRR---PVIPEG 277 (466)
T ss_dssp SSSSSCTTSCCHHHHHHHHHHHC--CCEECSCCEEEEEEEETTEEEEEECCTTSCCEEEEESCEEECCCEE---ECCCTT
T ss_pred eCCcCCCCCCCHHHHHHHHhcCE--EEEEECCEEEEEEEcCCCcEEEEEEecCCceEEEEcCEEEECcCCC---cccccc
Confidence 9764 11 11 1112 7888899999998532 2 5566 565 89999999999999 66663
Q ss_pred cCchhhh---------------hceeeeecccchh------hHHHHHHHhhhccCC
Q 018550 288 LKPMALL---------------LWMTIVLGHCTST------FFRQSWHQAFHLLGY 322 (354)
Q Consensus 288 l~~~~~~---------------~~~i~a~GD~~~~------~~~~~~~~~~~~~~~ 322 (354)
+...+.. ..+|||+|||+.. ...|+...+.++.+.
T Consensus 278 l~~~gl~~~~~Gi~vd~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 333 (466)
T 3l8k_A 278 AREIGLSISKTGIVVDETMKTNIPNVFATGDANGLAPYYHAAVRMSIAAANNIMAN 333 (466)
T ss_dssp TGGGTCCBCSSSBCCCTTCBCSSTTEEECGGGTCSCCSHHHHHHHHHHHHHHHHTT
T ss_pred hhhcCceeCCCCEeECCCccCCCCCEEEEEecCCCCccHhHHHHHHHHHHHHHhCC
Confidence 3332221 2459999999973 456777778888765
No 37
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.97 E-value=1.7e-30 Score=243.48 Aligned_cols=250 Identities=20% Similarity=0.268 Sum_probs=188.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||||++|+++|..|++.|++|+++|+ .+||.|....... .+.
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG~~~~~~~~~------------------------------~~~ 259 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGGQVLDTVDIE------------------------------NYI 259 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTGGGTTCSCBC------------------------------CBT
T ss_pred cccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCCccccccccc------------------------------ccC
Confidence 46899999999999999999999999999986 5788876521100 000
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeC--CCcEEEEEeecCCceEEEEeCEEE
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVE--SNKWKVKSRKKDDVVEEETFDAVV 159 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~--~~~~~v~~~~g~~~~~~~~~d~vI 159 (354)
.++ +....++..++.+.+.+++++ ++.+++|++++.+. ++.|.+++.++. ++.||+||
T Consensus 260 ~~~--------------~~~~~~l~~~l~~~~~~~gv~--v~~~~~v~~i~~~~~~~~~~~V~~~~g~----~~~~d~vV 319 (521)
T 1hyu_A 260 SVP--------------KTEGQKLAGALKAHVSDYDVD--VIDSQSASKLVPAATEGGLHQIETASGA----VLKARSII 319 (521)
T ss_dssp TBS--------------SBCHHHHHHHHHHHHHTSCEE--EECSCCEEEEECCSSTTSCEEEEETTSC----EEEEEEEE
T ss_pred CCC--------------CCCHHHHHHHHHHHHHHcCCE--EEcCCEEEEEEeccCCCceEEEEECCCC----EEEcCEEE
Confidence 111 123378888999988888888 89999999998642 147888887764 79999999
Q ss_pred EeeCCCCCcccCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC----cccc
Q 018550 160 VCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA----DETH 235 (354)
Q Consensus 160 lAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~----~~~~ 235 (354)
+||| +.++.|.++|...+.+..++.+...+...+.+++++|||+|.+|+|+|..|++.+.+|+++++.+. ....
T Consensus 320 lAtG--~~~~~~~ipG~~~~~~~~v~~~~~~~~~~~~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~~~~l~ 397 (521)
T 1hyu_A 320 IATG--AKWRNMNVPGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKADQVLQ 397 (521)
T ss_dssp ECCC--EEECCCCCTTTTTTTTTTEECCTTCCGGGGBTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCSCHHHH
T ss_pred ECCC--CCcCCCCCCChhhhcCceEEEeecCchhhcCCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCcCHHHH
Confidence 9999 778888899987766555555544444445789999999999999999999999999999999775 1223
Q ss_pred ccCCC-CC-CeEEecceeEEecCC-c---EEEcc---C--cEEecCEEEEcccCCCccCcccccCchhh-----------
Q 018550 236 EKQPG-YD-NMWLHSMVERANEDG-T---VVFRN---G--RVVSADVIMHCTGLTGTSTTTLFLKPMAL----------- 293 (354)
Q Consensus 236 ~~l~~-~~-~~~~~~~v~~v~~~~-~---v~~~~---g--~~~~~D~vi~a~G~~~~~p~~~~l~~~~~----------- 293 (354)
+++.+ .+ +++.++.++++..++ + +++.+ | .++++|.|++|+|+. ||++++.+...
T Consensus 398 ~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~---pn~~~l~~~l~~~~~G~I~Vd~ 474 (521)
T 1hyu_A 398 DKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIGLL---PNTHWLEGALERNRMGEIIIDA 474 (521)
T ss_dssp HHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEECCCEE---ESCGGGTTTSCBCTTSCBCCCT
T ss_pred HHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECcCCC---CCchHHhhhhccCCCCcEEeCC
Confidence 34444 34 888899999998653 2 55654 5 368999999999999 77777754211
Q ss_pred ----hhceeeeecccchhh
Q 018550 294 ----LLWMTIVLGHCTSTF 308 (354)
Q Consensus 294 ----~~~~i~a~GD~~~~~ 308 (354)
...+|||+|||+...
T Consensus 475 ~~~ts~p~VfA~GD~~~~~ 493 (521)
T 1hyu_A 475 KCETSVKGVFAAGDCTTVP 493 (521)
T ss_dssp TCBCSSTTEEECSTTBCCS
T ss_pred CCCCCCCCEEEeecccCCC
Confidence 013599999999743
No 38
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.97 E-value=9.9e-32 Score=249.79 Aligned_cols=290 Identities=16% Similarity=0.176 Sum_probs=190.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCccccc-ccccchhccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSS-LYKSLRVNLPRELMGF 80 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 80 (354)
+++|+|||||++|+++|..|++.|++|+|||+++.+||.|... +|.|.+.+.... .+..+...........
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~--------g~~p~k~l~~~~~~~~~~~~~~~~~g~~~ 77 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNV--------GCIPSKALLHSSHMYHEAKHSFANHGVKV 77 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHH--------SHHHHHHHHHHHHHHHHHHHTHHHHTEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCc--------CccchHHHHHHHHHHHHHHHHHHhcCccc
Confidence 5799999999999999999999999999999988899999763 555544332211 1111111000000000
Q ss_pred c--CCCCCccCCCCCCCCCCCCCH----HHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEE
Q 018550 81 Q--AYPFVARNYEGSVDLRRYPGH----EEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEET 154 (354)
Q Consensus 81 ~--~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ 154 (354)
. .+++.. .+... ..+...+.+.+++.+++ ++.++.+. + +. +.+.+.+.+|. ..++.
T Consensus 78 ~~~~~~~~~----------~~~~~~~~~~~l~~~~~~~~~~~gv~--~~~g~~~~-~--~~-~~~~v~~~~G~--~~~i~ 139 (470)
T 1dxl_A 78 SNVEIDLAA----------MMGQKDKAVSNLTRGIEGLFKKNKVT--YVKGYGKF-V--SP-SEISVDTIEGE--NTVVK 139 (470)
T ss_dssp SCEEECHHH----------HHHHHHHHHHHHHHHHHHHHHHHTCE--EEESCEEE-E--ET-TEEEECCSSSC--CEEEE
T ss_pred CCCccCHHH----------HHHHHHHHHHHHHHHHHHHHHhCCCE--EEEeEEEE-e--cC-CEEEEEeCCCc--eEEEE
Confidence 0 000000 00000 12333345566667888 88876553 3 33 56666654442 24799
Q ss_pred eCEEEEeeCCCCCcccCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC---
Q 018550 155 FDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA--- 231 (354)
Q Consensus 155 ~d~vIlAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~--- 231 (354)
||+||+||| +.|+.|+++|.+.. ..++........ ..+++++|||+|++|+|+|..|++.|.+|+++++.+.
T Consensus 140 ~d~lIiAtG--s~p~~p~~~g~~~~--~v~~~~~~~~~~-~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~ 214 (470)
T 1dxl_A 140 GKHIIIATG--SDVKSLPGVTIDEK--KIVSSTGALALS-EIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVP 214 (470)
T ss_dssp CSEEEECCC--EEECCBTTBCCCSS--SEECHHHHTTCS-SCCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred cCEEEECCC--CCCCCCCCCCCCcc--cEEeHHHhhhhh-hcCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc
Confidence 999999999 78888888776431 234433333322 2579999999999999999999999999999999864
Q ss_pred -------ccccccCCCCC-CeEEecceeEEecCC-c--EEEc---cC--cEEecCEEEEcccCCCccCcccc--cCchhh
Q 018550 232 -------DETHEKQPGYD-NMWLHSMVERANEDG-T--VVFR---NG--RVVSADVIMHCTGLTGTSTTTLF--LKPMAL 293 (354)
Q Consensus 232 -------~~~~~~l~~~~-~~~~~~~v~~v~~~~-~--v~~~---~g--~~~~~D~vi~a~G~~~~~p~~~~--l~~~~~ 293 (354)
+...+.+++.+ +++.++.|+++..++ . +.++ +| +++++|.||+|+|++ ||+++ ++..+.
T Consensus 215 ~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~---p~~~~l~~~~~gl 291 (470)
T 1dxl_A 215 TMDAEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRT---PFTSGLNLDKIGV 291 (470)
T ss_dssp TSCHHHHHHHHHHHHHSSCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCCEE---ECCTTSCCTTTTC
T ss_pred cccHHHHHHHHHHHHHcCCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCCCC---cCCCCCCchhcCC
Confidence 11222334444 899999999998654 2 4444 45 679999999999999 77766 333222
Q ss_pred h----------------hceeeeecccchh------hHHHHHHHhhhccCCCcc
Q 018550 294 L----------------LWMTIVLGHCTST------FFRQSWHQAFHLLGYHRR 325 (354)
Q Consensus 294 ~----------------~~~i~a~GD~~~~------~~~~~~~~~~~~~~~~~~ 325 (354)
. ..+|||+|||+.. ...|+...+.++.+....
T Consensus 292 ~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~ 345 (470)
T 1dxl_A 292 ETDKLGRILVNERFSTNVSGVYAIGDVIPGPMLAHKAEEDGVACVEYLAGKVGH 345 (470)
T ss_dssp CBCSSSCBCCCTTCBCSSTTEEECSTTSSSCCCHHHHHHHHHHHHHHHTTSCCC
T ss_pred ccCCCCCEeECcCCccCCCCEEEEeccCCCCccHHHHHHHHHHHHHHHcCCCcC
Confidence 1 2349999999873 356777778888775434
No 39
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.97 E-value=2e-31 Score=248.36 Aligned_cols=283 Identities=18% Similarity=0.187 Sum_probs=184.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeC---C------CccceeecCCCCCCCCCCCCCCCCcccccccccchhc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKG---E------QVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVN 72 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~---~------~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (354)
.+||+|||||++|+++|..|++.|.+|+|||+. + .+||+|.+. +|.|.+.+............
T Consensus 9 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~--------gciPsk~l~~~~~~~~~~~~ 80 (483)
T 3dgh_A 9 DYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNV--------GCIPKKLMHQASLLGEAVHE 80 (483)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHH--------SHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeeccc--------CchhhHHHHHHHHHHHHHHH
Confidence 479999999999999999999999999999942 1 389999874 77776654443322222111
Q ss_pred cccccccccCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHH-----------HHhCCcceEEeceEEEEEEEeCCCcEEE
Q 018550 73 LPRELMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFA-----------REFGVDQVVRLHTEVLNARLVESNKWKV 141 (354)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------~~~~~~~~v~~~~~v~~i~~~~~~~~~v 141 (354)
... +.+... .....++..+.++..... ...+++ +.. .....++ . ..+.+
T Consensus 81 ~~~-------~g~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~-g~a~~~~--~-~~v~v 140 (483)
T 3dgh_A 81 AAA-------YGWNVD-------DKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVE--YIN-GLGSFVD--S-HTLLA 140 (483)
T ss_dssp HHH-------TTBCCC-------CCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEC-SEEEEEE--T-TEEEE
T ss_pred HHh-------cCcccC-------CcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEE-eEEEEcc--C-CEEEE
Confidence 111 111000 001123344444443332 334555 443 3333332 2 45555
Q ss_pred EEeecCCceEEEEeCEEEEeeCCCCCcccCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCC
Q 018550 142 KSRKKDDVVEEETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAK 221 (354)
Q Consensus 142 ~~~~g~~~~~~~~~d~vIlAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~ 221 (354)
...++. .++.||+||+||| +.|+.|+++|.... .+++...... ...+++++|||+|++|+|+|..|++.|.
T Consensus 141 ~~~~g~---~~~~~d~lviATG--s~p~~p~i~G~~~~---~~~~~~~~~~-~~~~~~vvViGgG~~g~E~A~~l~~~g~ 211 (483)
T 3dgh_A 141 KLKSGE---RTITAQTFVIAVG--GRPRYPDIPGAVEY---GITSDDLFSL-DREPGKTLVVGAGYIGLECAGFLKGLGY 211 (483)
T ss_dssp ECTTCC---EEEEEEEEEECCC--EEECCCSSTTHHHH---CBCHHHHTTC-SSCCCEEEEECCSHHHHHHHHHHHHTTC
T ss_pred EeCCCe---EEEEcCEEEEeCC--CCcCCCCCCCcccc---cCcHHHHhhh-hhcCCcEEEECCCHHHHHHHHHHHHcCC
Confidence 554432 4799999999999 89999999887542 2233222222 2356899999999999999999999999
Q ss_pred EEEEEEecCC---------ccccccCCCCC-CeEEecceeEEecC--Cc--EEEccCc-----EEecCEEEEcccCCCcc
Q 018550 222 EVHIASRSVA---------DETHEKQPGYD-NMWLHSMVERANED--GT--VVFRNGR-----VVSADVIMHCTGLTGTS 282 (354)
Q Consensus 222 ~v~~~~r~~~---------~~~~~~l~~~~-~~~~~~~v~~v~~~--~~--v~~~~g~-----~~~~D~vi~a~G~~~~~ 282 (354)
+|+++.+... +...+.+++.+ +++.++.|+++..+ +. |++.++. ++++|.|++|+|++
T Consensus 212 ~Vtlv~~~~~l~~~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~--- 288 (483)
T 3dgh_A 212 EPTVMVRSIVLRGFDQQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRK--- 288 (483)
T ss_dssp EEEEEESSCSSTTSCHHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEE---
T ss_pred EEEEEeCCCCCcccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcccc---
Confidence 9999998542 11223344445 89999999999753 32 6666653 78999999999999
Q ss_pred Cccccc--Cchhh---------------hhceeeeecccch-------hhHHHHHHHhhhccCCCc
Q 018550 283 TTTLFL--KPMAL---------------LLWMTIVLGHCTS-------TFFRQSWHQAFHLLGYHR 324 (354)
Q Consensus 283 p~~~~l--~~~~~---------------~~~~i~a~GD~~~-------~~~~~~~~~~~~~~~~~~ 324 (354)
|+++++ ...+. ...+|||+|||+. ....|+...+.++.+...
T Consensus 289 p~~~~l~l~~~gl~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~g~~~ 354 (483)
T 3dgh_A 289 GLVDDLNLPNAGVTVQKDKIPVDSQEATNVANIYAVGDIIYGKPELTPVAVLAGRLLARRLYGGST 354 (483)
T ss_dssp ECCGGGTGGGTTCCCBTTBBCCCTTCBCSSTTEEECSTTBTTSCCCHHHHHHHHHHHHHHHHSCCC
T ss_pred cCcCcCCchhcCccccCCEEEECcCCccCCCCEEEEEcccCCCCccHHHHHHHHHHHHHHHcCCCC
Confidence 777665 22211 1244999999973 235667777888876543
No 40
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.97 E-value=1.5e-31 Score=249.31 Aligned_cols=284 Identities=16% Similarity=0.193 Sum_probs=184.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEee--------CCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEK--------GEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNL 73 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~--------~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (354)
++||+|||||++|+++|..|++.|.+|+|||+ ...+||+|.+. +|.|.+.+.............
T Consensus 6 ~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~--------gciPsk~l~~~~~~~~~~~~~ 77 (488)
T 3dgz_A 6 SFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNV--------GCIPKKLMHQAALLGGMIRDA 77 (488)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHH--------SHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeeccc--------CCcccHHHHHHHHHHHHHHHH
Confidence 47999999999999999999999999999997 55789999874 787776554443322222211
Q ss_pred ccccccccCCCCCccCCCCCCCCCCCCCHHHHHHHHHHH-----------HHHhCCcceEEeceEEEEEEEeCCCcEEEE
Q 018550 74 PRELMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNF-----------AREFGVDQVVRLHTEVLNARLVESNKWKVK 142 (354)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~ 142 (354)
.. +.+... ....+++..+.++..++ ....+++ +. ..++..++ . ..+.+.
T Consensus 78 ~~-------~g~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~--~i-~g~~~~~~--~-~~v~v~ 137 (488)
T 3dgz_A 78 HH-------YGWEVA-------QPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVK--YF-NIKASFVD--E-HTVRGV 137 (488)
T ss_dssp HH-------TTCCCC-------SSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EE-CCEEEESS--S-SEEEEE
T ss_pred Hh-------cCcccC-------CcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EE-EEEEEEcc--C-CeEEEE
Confidence 11 111100 01122334444443332 3334555 43 34443332 1 344444
Q ss_pred EeecCCceEEEEeCEEEEeeCCCCCcccCC-CCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCC
Q 018550 143 SRKKDDVVEEETFDAVVVCNGHFSVPRLAQ-VPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAK 221 (354)
Q Consensus 143 ~~~g~~~~~~~~~d~vIlAtG~~s~~~~p~-~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~ 221 (354)
..++ ...++.||+||+||| +.|+.|+ ++|... ..+++...... ...+++++|||+|++|+|+|..|++.|.
T Consensus 138 ~~~g--~~~~~~~d~lViATG--s~p~~p~~i~G~~~---~~~~~~~~~~~-~~~~~~vvViGgG~ig~E~A~~l~~~g~ 209 (488)
T 3dgz_A 138 DKGG--KATLLSAEHIVIATG--GRPRYPTQVKGALE---YGITSDDIFWL-KESPGKTLVVGASYVALECAGFLTGIGL 209 (488)
T ss_dssp CTTS--CEEEEEEEEEEECCC--EEECCCSSCBTHHH---HCBCHHHHTTC-SSCCCSEEEECCSHHHHHHHHHHHHTTC
T ss_pred eCCC--ceEEEECCEEEEcCC--CCCCCCCCCCCccc---ccCcHHHHHhh-hhcCCeEEEECCCHHHHHHHHHHHHcCC
Confidence 4333 235899999999999 8999998 888643 12233222222 2356889999999999999999999999
Q ss_pred EEEEEEecCC---------ccccccCCCCC-CeEEecceeEEec--CCc--EEEcc---Cc--EEecCEEEEcccCCCcc
Q 018550 222 EVHIASRSVA---------DETHEKQPGYD-NMWLHSMVERANE--DGT--VVFRN---GR--VVSADVIMHCTGLTGTS 282 (354)
Q Consensus 222 ~v~~~~r~~~---------~~~~~~l~~~~-~~~~~~~v~~v~~--~~~--v~~~~---g~--~~~~D~vi~a~G~~~~~ 282 (354)
+|+++.+... +...+.+++.+ +++.++.++++.. ++. +++.+ |+ ++++|.||+|+|++
T Consensus 210 ~Vtlv~~~~~l~~~d~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~--- 286 (488)
T 3dgz_A 210 DTTVMMRSIPLRGFDQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRV--- 286 (488)
T ss_dssp CEEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEE---
T ss_pred ceEEEEcCcccccCCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCC---
Confidence 9999998653 11223344444 8899999999874 232 55544 44 47899999999999
Q ss_pred Cccccc--Cchhhh-----------------hceeeeecccch-------hhHHHHHHHhhhccCCCc
Q 018550 283 TTTLFL--KPMALL-----------------LWMTIVLGHCTS-------TFFRQSWHQAFHLLGYHR 324 (354)
Q Consensus 283 p~~~~l--~~~~~~-----------------~~~i~a~GD~~~-------~~~~~~~~~~~~~~~~~~ 324 (354)
|+++++ ...+.. ..+|||+|||+. ....|+...+.++.+...
T Consensus 287 p~~~~l~l~~~g~~~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~g~~~ 354 (488)
T 3dgz_A 287 PETRTLNLEKAGISTNPKNQKIIVDAQEATSVPHIYAIGDVAEGRPELTPTAIKAGKLLAQRLFGKSS 354 (488)
T ss_dssp ESCGGGTGGGGTCCBCSSSCCBCCCTTSBCSSTTEEECGGGBTTCCCCHHHHHHHHHHHHHHHHSCCC
T ss_pred cccCcCCccccCcEecCCCCeEeECCCCccCCCCEEEeEEecCCCCcchhHHHHHHHHHHHHHcCCCC
Confidence 777663 222111 134999999973 235667777888876543
No 41
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.97 E-value=1.1e-31 Score=249.83 Aligned_cols=285 Identities=17% Similarity=0.166 Sum_probs=184.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCccccc-ccccchhccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSS-LYKSLRVNLPRELMGF 80 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 80 (354)
+++|+|||||++|+++|..|++.|++|+|||+++.+||.|.+. +|.|.+.++... .+..+..........+
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~--------g~~psk~l~~~~~~~~~~~~~~~~~gi~~ 76 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNV--------GCIPSKALLNNSHLFHQMHTEAQKRGIDV 76 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHH--------SHHHHHHHHHHHHHHHHHHHTSGGGTEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCcccee--------ccHHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 3689999999999999999999999999999988999999873 565554333221 2222221111111100
Q ss_pred cCCCCCccCCCCCCCCCCCCCHHHH-----------HHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCc
Q 018550 81 QAYPFVARNYEGSVDLRRYPGHEEV-----------LRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDV 149 (354)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~ 149 (354)
. .. ...+...+ ...+.+.+++.+++ ++.++.+.. +. +.+.+.+.++..
T Consensus 77 --~--~~----------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~--~~~g~~~~~---~~-~~v~V~~~~G~~- 135 (478)
T 1v59_A 77 --N--GD----------IKINVANFQKAKDDAVKQLTGGIELLFKKNKVT--YYKGNGSFE---DE-TKIRVTPVDGLE- 135 (478)
T ss_dssp --C--SC----------EEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEESEEEES---SS-SEEEEECCTTCT-
T ss_pred --C--CC----------CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEEEEEEc---cC-CeEEEEecCCCc-
Confidence 0 00 00011222 22244455667887 777776542 33 566776655421
Q ss_pred eEE------EEeCEEEEeeCCCCCcccCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCCEE
Q 018550 150 VEE------ETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEV 223 (354)
Q Consensus 150 ~~~------~~~d~vIlAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v 223 (354)
.+ +.||+||+||| +.|+ .++|.+.......++........ .+++++|||+|++|+|+|..|++.|.+|
T Consensus 136 -~~~~~~~~i~~d~lViAtG--s~p~--~~~g~~~~~~~v~~~~~~~~~~~-~~~~vvViGgG~~g~e~A~~l~~~g~~V 209 (478)
T 1v59_A 136 -GTVKEDHILDVKNIIVATG--SEVT--PFPGIEIDEEKIVSSTGALSLKE-IPKRLTIIGGGIIGLEMGSVYSRLGSKV 209 (478)
T ss_dssp -TCCSSCEEEEEEEEEECCC--EEEC--CCTTCCCCSSSEECHHHHTTCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred -ccccccceEEeCEEEECcC--CCCC--CCCCCCCCCceEEcHHHHHhhhc-cCceEEEECCCHHHHHHHHHHHHcCCEE
Confidence 24 89999999999 5553 34454321113344333333222 4799999999999999999999999999
Q ss_pred EEEEecCC----------ccccccCCCCC-CeEEecceeEEec--CCc---EEEc-----cCcEEecCEEEEcccCCCcc
Q 018550 224 HIASRSVA----------DETHEKQPGYD-NMWLHSMVERANE--DGT---VVFR-----NGRVVSADVIMHCTGLTGTS 282 (354)
Q Consensus 224 ~~~~r~~~----------~~~~~~l~~~~-~~~~~~~v~~v~~--~~~---v~~~-----~g~~~~~D~vi~a~G~~~~~ 282 (354)
+++++.+. +...+.+++.+ +++.++.|+++.. ++. ++++ +++++++|.||+|+|++
T Consensus 210 tlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~--- 286 (478)
T 1v59_A 210 TVVEFQPQIGASMDGEVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRR--- 286 (478)
T ss_dssp EEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEE---
T ss_pred EEEEeCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCC---
Confidence 99999874 11222334444 8899999999986 443 5555 34689999999999999
Q ss_pred Cccc--ccCchhhh----------------hceeeeecccchh------hHHHHHHHhhhccCCCc
Q 018550 283 TTTL--FLKPMALL----------------LWMTIVLGHCTST------FFRQSWHQAFHLLGYHR 324 (354)
Q Consensus 283 p~~~--~l~~~~~~----------------~~~i~a~GD~~~~------~~~~~~~~~~~~~~~~~ 324 (354)
||++ +++..+.. ..+|||+|||+.. ...|+...+.++.+...
T Consensus 287 p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~ 352 (478)
T 1v59_A 287 PYIAGLGAEKIGLEVDKRGRLVIDDQFNSKFPHIKVVGDVTFGPMLAHKAEEEGIAAVEMLKTGHG 352 (478)
T ss_dssp ECCTTSCTTTTTCCBCTTSCBCCCTTSBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHHHSCC
T ss_pred cCCCCCCchhcCceeCCCCCEeECcCCccCCCCEEEeeccCCCcccHHHHHHHHHHHHHHHcCCCC
Confidence 6666 44433221 2349999999873 35677777888876443
No 42
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.97 E-value=2.9e-31 Score=247.92 Aligned_cols=261 Identities=16% Similarity=0.224 Sum_probs=167.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhccccccccc
Q 018550 1 MFRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGF 80 (354)
Q Consensus 1 ~~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (354)
|++||+|||||++|+++|..|++.|.+|+|||++ .+||+|.+. +|.|.+.+.....+.....+... +++
T Consensus 1 m~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~c~~~--------gc~P~k~l~~~a~~~~~~~~~~~--~g~ 69 (500)
T 1onf_A 1 MVYDLIVIGGGSGGMAAARRAARHNAKVALVEKS-RLGGTCVNV--------GCVPKKIMFNAASVHDILENSRH--YGF 69 (500)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTHHHHHT--------SHHHHHHHHHHHHHHHHHHHGGG--GTC
T ss_pred CccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCC-CcCcccccc--------CCcchHHHHHHHHHHHHHHhhHh--cCC
Confidence 6789999999999999999999999999999997 689999873 66665443332222111111111 111
Q ss_pred cCCCCCccCCCCCCCCCCCCCHHHH-----------HHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEe-----
Q 018550 81 QAYPFVARNYEGSVDLRRYPGHEEV-----------LRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSR----- 144 (354)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~----- 144 (354)
... ...++..+ ...+...+.+.+++ +..+. +..++. ..+.+...
T Consensus 70 ---~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~--~~~g~-~~~id~---~~v~v~~~~~~~~ 129 (500)
T 1onf_A 70 ---DTK-----------FSFNLPLLVERRDKYIQRLNNIYRQNLSKDKVD--LYEGT-ASFLSE---NRILIKGTKDNNN 129 (500)
T ss_dssp ---CCC-----------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEESC-CCCC------------------
T ss_pred ---ccC-----------CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEeE-EEEeeC---CEEEEEecccccc
Confidence 000 00111222 22334445566777 66653 233321 23333220
Q ss_pred ----ecCCceEEEEeCEEEEeeCCCCCcccCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccC
Q 018550 145 ----KKDDVVEEETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFA 220 (354)
Q Consensus 145 ----~g~~~~~~~~~d~vIlAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g 220 (354)
++. ..++.||+||+||| +.|+.|+++|.+. .+++..+..... +++++|||+|++|+|+|..|++.|
T Consensus 130 ~~~~~~~--~~~~~~d~lViAtG--s~p~~p~i~G~~~----~~~~~~~~~~~~--~~~vvViGgG~ig~E~A~~l~~~g 199 (500)
T 1onf_A 130 KDNGPLN--EEILEGRNILIAVG--NKPVFPPVKGIEN----TISSDEFFNIKE--SKKIGIVGSGYIAVELINVIKRLG 199 (500)
T ss_dssp -------------CBSSEEECCC--CCBCCCSCTTGGG----CEEHHHHTTCCC--CSEEEEECCSHHHHHHHHHHHTTT
T ss_pred ccccCCC--ceEEEeCEEEECCC--CCCCCCCCCCCCc----ccCHHHHhccCC--CCeEEEECChHHHHHHHHHHHHcC
Confidence 011 13789999999999 7899998888642 344444433332 799999999999999999999999
Q ss_pred CEEEEEEecCC----------ccccccCCCCC-CeEEecceeEEecC--C--cEEEccCcE-EecCEEEEcccCCCccCc
Q 018550 221 KEVHIASRSVA----------DETHEKQPGYD-NMWLHSMVERANED--G--TVVFRNGRV-VSADVIMHCTGLTGTSTT 284 (354)
Q Consensus 221 ~~v~~~~r~~~----------~~~~~~l~~~~-~~~~~~~v~~v~~~--~--~v~~~~g~~-~~~D~vi~a~G~~~~~p~ 284 (354)
.+|+++++.+. +...+.+++.+ +++.++.|++++.+ + .+++++|++ +++|.||+|+|++ |+
T Consensus 200 ~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~---p~ 276 (500)
T 1onf_A 200 IDSYIFARGNRILRKFDESVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRS---PD 276 (500)
T ss_dssp CEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBC---CT
T ss_pred CeEEEEecCCccCcccchhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCC---cC
Confidence 99999999764 11223344455 89999999999854 3 267788887 9999999999999 77
Q ss_pred ccc--cCchhhh---------------hceeeeecccc
Q 018550 285 TLF--LKPMALL---------------LWMTIVLGHCT 305 (354)
Q Consensus 285 ~~~--l~~~~~~---------------~~~i~a~GD~~ 305 (354)
++. ++..+.. ..+|||+|||+
T Consensus 277 ~~~l~~~~~g~~~~~G~i~vd~~~~t~~~~iya~GD~~ 314 (500)
T 1onf_A 277 TENLKLEKLNVETNNNYIVVDENQRTSVNNIYAVGDCC 314 (500)
T ss_dssp TTTSSCTTTTCCBSSSCEEECTTCBCSSSSEEECSTTE
T ss_pred CCCCCchhcCccccCCEEEECCCcccCCCCEEEEeccc
Confidence 653 2332221 23599999999
No 43
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=99.97 E-value=1.4e-31 Score=249.40 Aligned_cols=282 Identities=18% Similarity=0.246 Sum_probs=185.3
Q ss_pred CeEEEEcCChHHHHHHHHHHH-cCCcEEEEe--------eCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcc
Q 018550 3 RHVAVIGAGAAGLVVGHELLR-EGHTVVVYE--------KGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNL 73 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~-~g~~v~lie--------~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (354)
+||+|||||++|+++|..|++ .|++|+||| +...+||+|.+. +|.|.+.+.............
T Consensus 8 ~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~--------gciP~k~l~~~a~~~~~~~~~ 79 (495)
T 2wpf_A 8 FDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNV--------GCVPKKLMVTGAQYMDHLRES 79 (495)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHH--------SHHHHHHHHHHHHHHHHHHHH
T ss_pred cCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecC--------CcchHHHHHHHHHHHHHHhHH
Confidence 689999999999999999999 999999999 346789999874 677665544333221111111
Q ss_pred ccccccccCCCCCccCCCCCCCCCCCCCHHHHHHHHHH-----------HHHHh-CCcceEEeceEEEEEEEeCCCcEEE
Q 018550 74 PRELMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQN-----------FAREF-GVDQVVRLHTEVLNARLVESNKWKV 141 (354)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----------~~~~~-~~~~~v~~~~~v~~i~~~~~~~~~v 141 (354)
+ .+.+... ......++..+.++..+ .+++. +++ ++.+ ++..++ .+++
T Consensus 80 ~-------~~g~~~~------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~--~~~g-~~~~i~-----~~~v 138 (495)
T 2wpf_A 80 A-------GFGWEFD------GSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLD--FFLG-WGSLES-----KNVV 138 (495)
T ss_dssp H-------TTTEECC------GGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEE--EEES-EEEEEE-----TTEE
T ss_pred H-------hcCcccC------CcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeE--EEEe-EEEEee-----CCEE
Confidence 1 1111000 00000122344433332 33444 666 6654 355542 2345
Q ss_pred EEeecCC----ceEEEEeCEEEEeeCCCCCcccCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHh
Q 018550 142 KSRKKDD----VVEEETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLA 217 (354)
Q Consensus 142 ~~~~g~~----~~~~~~~d~vIlAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~ 217 (354)
.+.+..+ ....+.||+||+||| +.|+.|+++|.+. .+++..+.... ..+++++|||+|.+|+|+|..|+
T Consensus 139 ~v~~~~~~~~~~~~~~~~d~lViATG--s~p~~p~i~G~~~----~~~~~~~~~~~-~~~~~vvViGgG~ig~E~A~~l~ 211 (495)
T 2wpf_A 139 VVRETADPKSAVKERLQADHILLATG--SWPQMPAIPGIEH----CISSNEAFYLP-EPPRRVLTVGGGFISVEFAGIFN 211 (495)
T ss_dssp EEESSSSTTSCEEEEEEEEEEEECCC--EEECCCCCTTGGG----CEEHHHHTTCS-SCCSEEEEECSSHHHHHHHHHHH
T ss_pred EEeecCCccCCCCeEEEcCEEEEeCC--CCcCCCCCCCccc----cccHHHHHhhh-hcCCeEEEECCCHHHHHHHHHHH
Confidence 5542100 014799999999999 8899998888642 23333333322 24789999999999999999999
Q ss_pred cc---CCEEEEEEecCC----------ccccccCCCCC-CeEEecceeEEecC--C--cEEEccCcEEecCEEEEcccCC
Q 018550 218 GF---AKEVHIASRSVA----------DETHEKQPGYD-NMWLHSMVERANED--G--TVVFRNGRVVSADVIMHCTGLT 279 (354)
Q Consensus 218 ~~---g~~v~~~~r~~~----------~~~~~~l~~~~-~~~~~~~v~~v~~~--~--~v~~~~g~~~~~D~vi~a~G~~ 279 (354)
+. |.+|+++++.+. ....+.+++.+ +++.++.|+++..+ + .|++++|+++++|.||+|+|++
T Consensus 212 ~~~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~ 291 (495)
T 2wpf_A 212 AYKPPGGKVTLCYRNNLILRGFDETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRI 291 (495)
T ss_dssp HHCCTTCEEEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEE
T ss_pred hhCCCCCeEEEEEcCCccccccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCc
Confidence 99 999999999764 11223334445 89999999999854 2 2777888899999999999999
Q ss_pred CccCccccc--Cchhhh----------------hceeeeecccchh------hHHHHHHHhhhccCCC
Q 018550 280 GTSTTTLFL--KPMALL----------------LWMTIVLGHCTST------FFRQSWHQAFHLLGYH 323 (354)
Q Consensus 280 ~~~p~~~~l--~~~~~~----------------~~~i~a~GD~~~~------~~~~~~~~~~~~~~~~ 323 (354)
||+++| +..+.. ..+|||+|||+.. ...|+...+.++.+..
T Consensus 292 ---p~~~~L~l~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~~ 356 (495)
T 2wpf_A 292 ---PRTNDLQLGNVGVKLTPKGGVQVDEFSRTNVPNIYAIGDITDRLMLTPVAINEGAALVDTVFGNK 356 (495)
T ss_dssp ---ECCGGGTGGGTTCCBCTTSSBCCCTTCBCSSTTEEECGGGGCSCCCHHHHHHHHHHHHHHHHSSC
T ss_pred ---ccccccchhhcCccCCCCCCEEECCCCccCCCCEEEEeccCCCccCHHHHHHHHHHHHHHhcCCC
Confidence 777643 322211 1349999999873 3567777788887643
No 44
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.97 E-value=1.8e-31 Score=250.50 Aligned_cols=281 Identities=15% Similarity=0.158 Sum_probs=190.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccc-cccchhccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSL-YKSLRVNLPRELMGF 80 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 80 (354)
+++|+|||||++|+++|..|++.|.+|+|||+++.+||.|.+. +|.|.+.+..... +..+. +.+
T Consensus 43 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~--------g~~p~k~l~~~~~~~~~~~-~~~------ 107 (523)
T 1mo9_A 43 EYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHN--------ACVPHHLFSDCAAELMLAR-TFS------ 107 (523)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHH--------SHHHHHHHHHHHHHHHHHH-HTT------
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCccccc--------CcCchHHHHHHHHHHHHHh-hhh------
Confidence 4789999999999999999999999999999987799998863 4444332221111 11111 111
Q ss_pred cCCC-CCccCCCCCCCCCCCCCHHHHHHHHH-------HHH-----HHhCCcceEEeceEEEEEEEeCCCcEEEEEeecC
Q 018550 81 QAYP-FVARNYEGSVDLRRYPGHEEVLRYLQ-------NFA-----REFGVDQVVRLHTEVLNARLVESNKWKVKSRKKD 147 (354)
Q Consensus 81 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~-------~~~-----~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~ 147 (354)
.+. +.. ....+++..++.+++. ... .+.+++ +.++.++..++. +.+.+. +
T Consensus 108 -~~g~~~~-------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~--~~~~~~v~~i~~-----~~v~~~-g- 170 (523)
T 1mo9_A 108 -GQYWFPD-------MTEKVVGIKEVVDLFRAGRNGPHGIMNFQSKEQLNLE--YILNCPAKVIDN-----HTVEAA-G- 170 (523)
T ss_dssp -TSTTCCC-------CTTCCCCHHHHHHHHHHHTHHHHHHHHHHHHHTSCCC--EEESSCCEEEET-----TEEEET-T-
T ss_pred -hcCcHHH-------HHhhhhhHHHHHHHHHhhhhhhhhhhhhcccccCCcE--EEEeeEEEEeeC-----CEEEEC-C-
Confidence 111 100 1112333566666654 333 556777 775677777652 245543 2
Q ss_pred CceEEEEeCEEEEeeCCCCCcccCCCCCCCCCCcceeecccCC-CCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEE
Q 018550 148 DVVEEETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYR-IPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIA 226 (354)
Q Consensus 148 ~~~~~~~~d~vIlAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~-~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~ 226 (354)
..+.||+||+||| +.|+.|+++|.... .++++.... ......+++++|||+|.+|+|+|..|.+.|.+|+++
T Consensus 171 ---~~~~~d~lViATG--s~p~~p~i~G~~~~--~v~~~~~~~~~l~~~~g~~vvViGgG~~g~E~A~~l~~~G~~Vtlv 243 (523)
T 1mo9_A 171 ---KVFKAKNLILAVG--AGPGTLDVPGVNAK--GVFDHATLVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGRRTVML 243 (523)
T ss_dssp ---EEEEBSCEEECCC--EECCCCCSTTTTSB--TEEEHHHHHHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred ---EEEEeCEEEECCC--CCCCCCCCCCcccC--cEeeHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEE
Confidence 3799999999999 88999998887641 234433333 222233499999999999999999999999999999
Q ss_pred EecCC----------ccccccCCCCC-CeEEecceeEEec--CCc-----EEEccCc-EEecCEEEEcccCCCccCccc-
Q 018550 227 SRSVA----------DETHEKQPGYD-NMWLHSMVERANE--DGT-----VVFRNGR-VVSADVIMHCTGLTGTSTTTL- 286 (354)
Q Consensus 227 ~r~~~----------~~~~~~l~~~~-~~~~~~~v~~v~~--~~~-----v~~~~g~-~~~~D~vi~a~G~~~~~p~~~- 286 (354)
.+.+. ....+.+++.+ +++.++.|+++.. ++. |++++|+ ++++|.||+|+|+. |+++
T Consensus 244 ~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~---p~~~~ 320 (523)
T 1mo9_A 244 VRTEPLKLIKDNETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQ---PRSAE 320 (523)
T ss_dssp CSSCTTTTCCSHHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCE---ECCHH
T ss_pred EecCcccccccHHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCc---cCCcc
Confidence 99764 11223334445 8999999999975 442 5566776 89999999999999 7776
Q ss_pred ccCchhhh----------------hceeeeecccchh------hHHHHHHHhhhccCCCc
Q 018550 287 FLKPMALL----------------LWMTIVLGHCTST------FFRQSWHQAFHLLGYHR 324 (354)
Q Consensus 287 ~l~~~~~~----------------~~~i~a~GD~~~~------~~~~~~~~~~~~~~~~~ 324 (354)
+++..+.. ..+|||+|||+.. ...|+...+.++.+...
T Consensus 321 ~l~~~gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~ 380 (523)
T 1mo9_A 321 LAKILGLDLGPKGEVLVNEYLQTSVPNVYAVGDLIGGPMEMFKARKSGCYAARNVMGEKI 380 (523)
T ss_dssp HHHHHTCCBCTTSCBCCCTTSBCSSTTEEECGGGGCSSCSHHHHHHHHHHHHHHHTTCCC
T ss_pred CHHHcCCccCCCCCEEECCCCccCCCCEEEEeecCCCcccHHHHHHHHHHHHHHHcCCCC
Confidence 55433221 2349999999983 35677777888877443
No 45
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.97 E-value=3.9e-32 Score=245.01 Aligned_cols=263 Identities=13% Similarity=0.179 Sum_probs=179.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
+.+|+|||||+||+++|..|.+.+.+|+|||+++.++.... ..... .. +
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~----------------------~l~~~---l~----g-- 57 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRP----------------------RLNEI---IA----K-- 57 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGG----------------------GHHHH---HH----S--
T ss_pred CCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccC----------------------hhhHH---Hc----C--
Confidence 46899999999999999999778899999999865431000 00000 00 0
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEe
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlA 161 (354)
..+ .+++..+..+++++.+++ ++++++|++++.++ .++++.++. ++.||+||+|
T Consensus 58 ~~~-----------------~~~l~~~~~~~~~~~~i~--~~~~~~V~~id~~~---~~v~~~~g~----~~~yd~lvlA 111 (385)
T 3klj_A 58 NKS-----------------IDDILIKKNDWYEKNNIK--VITSEFATSIDPNN---KLVTLKSGE----KIKYEKLIIA 111 (385)
T ss_dssp CCC-----------------GGGTBSSCHHHHHHTTCE--EECSCCEEEEETTT---TEEEETTSC----EEECSEEEEC
T ss_pred CCC-----------------HHHccCCCHHHHHHCCCE--EEeCCEEEEEECCC---CEEEECCCC----EEECCEEEEe
Confidence 000 022222334455677888 99999999998643 467777764 8999999999
Q ss_pred eCCCCCcccCCCCCCCCCCcceeecccCCCCCC-----CCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC--c--
Q 018550 162 NGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNP-----FQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA--D-- 232 (354)
Q Consensus 162 tG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~-----~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~--~-- 232 (354)
|| +.|+.|+++|.+ .+.+.....+... ..+++++|||+|.+|+|+|..|++.|.+|+++++.+. .
T Consensus 112 tG--~~p~~p~i~G~~----~v~~~~~~~d~~~l~~~l~~~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~ 185 (385)
T 3klj_A 112 SG--SIANKIKVPHAD----EIFSLYSYDDALKIKDECKNKGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLERQ 185 (385)
T ss_dssp CC--EEECCCCCTTCS----CEECCSSHHHHHHHHHHHHHHSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTT
T ss_pred cC--CCcCCCCCCCCC----CeEEeCCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhh
Confidence 99 899999998876 2222221111111 1268999999999999999999999999999999874 1
Q ss_pred -------cccccCCCCC-CeEEecceeEEecCCcEEEccCcEEecCEEEEcccCCCccCcccccCchhhh----------
Q 018550 233 -------ETHEKQPGYD-NMWLHSMVERANEDGTVVFRNGRVVSADVIMHCTGLTGTSTTTLFLKPMALL---------- 294 (354)
Q Consensus 233 -------~~~~~l~~~~-~~~~~~~v~~v~~~~~v~~~~g~~~~~D~vi~a~G~~~~~p~~~~l~~~~~~---------- 294 (354)
...+.+++.+ +++.++.++++ |+++++|.||+|+|++ |++++++..+..
T Consensus 186 ~~~~~~~~~~~~l~~~gV~~~~~~~v~~i----------g~~~~~D~vv~a~G~~---p~~~~~~~~gl~~~~gi~vd~~ 252 (385)
T 3klj_A 186 LDRDGGLFLKDKLDRLGIKIYTNSNFEEM----------GDLIRSSCVITAVGVK---PNLDFIKDTEIASKRGILVNDH 252 (385)
T ss_dssp SCHHHHHHHHHHHHTTTCEEECSCCGGGC----------HHHHHHSEEEECCCEE---ECCGGGTTSCCCBSSSEEECTT
T ss_pred cCHHHHHHHHHHHHhCCCEEEeCCEEEEc----------CeEEecCeEEECcCcc---cChhhhhhcCCCcCCCEEECCC
Confidence 1122233444 67777777665 5678999999999999 888887654332
Q ss_pred ----hceeeeecccch----------hhHHHHHHHhhhccCCCccccc-CCCCCccccCCc
Q 018550 295 ----LWMTIVLGHCTS----------TFFRQSWHQAFHLLGYHRRLSL-SPSLNSRASGLP 340 (354)
Q Consensus 295 ----~~~i~a~GD~~~----------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 340 (354)
..+|||+|||+. ....|+...|.++.+....+.. .|..++..+++.
T Consensus 253 ~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~~~~~~~~~~~~~ 313 (385)
T 3klj_A 253 METSIKDIYACGDVAEFYGKNPGLINIANKQGEVAGLNACGEDASYSEIIPSPILKVSGIS 313 (385)
T ss_dssp CBCSSTTEEECGGGEEETTBCCCCHHHHHHHHHHHHHHHTTCCCCCCCCCCCCEEEETTEE
T ss_pred cccCCCCEEEEEeeEecCCCcccHHHHHHHHHHHHHHHhcCCCcCCCCCCCcEEEEeCCCc
Confidence 345999999985 2456777888898876554332 133444334443
No 46
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2e-31 Score=247.90 Aligned_cols=285 Identities=15% Similarity=0.196 Sum_probs=183.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
++||+|||||++|+++|..|++.|.+|+|||++ .+||+|.+. +|.|.+.+............... +++.
T Consensus 11 ~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~n~--------gciP~k~l~~~~~~~~~~~~~~~--~g~~ 79 (479)
T 2hqm_A 11 HYDYLVIGGGSGGVASARRAASYGAKTLLVEAK-ALGGTCVNV--------GCVPKKVMWYASDLATRVSHANE--YGLY 79 (479)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS-CTTHHHHHH--------SHHHHHHHHHHHHHHHHHTTTTT--TTBS
T ss_pred cCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC-CcCCcCccc--------CcHHHHHHHHHHHHHHHHHhHHh--cCcc
Confidence 378999999999999999999999999999997 789999863 56665443322211111111110 0110
Q ss_pred CC-CCCccCCCCCCCCCCCCCHHHHH-----------HHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCc
Q 018550 82 AY-PFVARNYEGSVDLRRYPGHEEVL-----------RYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDV 149 (354)
Q Consensus 82 ~~-~~~~~~~~~~~~~~~~~~~~~~~-----------~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~ 149 (354)
.. +... .....++..+. ..+...+.+.+++ +..+ ++..+ +. +.+.+...++.
T Consensus 80 ~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~--~~~g-~~~~i--~~-~~~~v~~~~g~-- 143 (479)
T 2hqm_A 80 QNLPLDK--------EHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVD--VVFG-WARFN--KD-GNVEVQKRDNT-- 143 (479)
T ss_dssp TTSCCSG--------GGCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEE--EEEE-EEEEC--TT-SCEEEEESSSC--
T ss_pred ccccccc--------ccCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEe-EEEEe--eC-CEEEEEeCCCc--
Confidence 00 0000 00011122222 2333444455666 5554 35444 22 55666654442
Q ss_pred eEEEEeCEEEEeeCCCCCcccC-CCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEe
Q 018550 150 VEEETFDAVVVCNGHFSVPRLA-QVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASR 228 (354)
Q Consensus 150 ~~~~~~d~vIlAtG~~s~~~~p-~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r 228 (354)
..++.||+||+||| +.|+.| +++|.+. .+++..+... ...+++++|||+|++|+|+|..|++.|.+|+++++
T Consensus 144 ~~~~~~d~lviAtG--s~p~~p~~i~g~~~----~~~~~~~~~l-~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~ 216 (479)
T 2hqm_A 144 TEVYSANHILVATG--GKAIFPENIPGFEL----GTDSDGFFRL-EEQPKKVVVVGAGYIGIELAGVFHGLGSETHLVIR 216 (479)
T ss_dssp CEEEEEEEEEECCC--EEECCCTTSTTGGG----SBCHHHHHHC-SSCCSEEEEECSSHHHHHHHHHHHHTTCEEEEECS
T ss_pred EEEEEeCEEEEcCC--CCCCCCCCCCCccc----ccchHHHhcc-cccCCeEEEECCCHHHHHHHHHHHHcCCceEEEEe
Confidence 24789999999999 888888 8888642 1222222111 12578999999999999999999999999999999
Q ss_pred cCC-----c-----cccccCCCCC-CeEEecceeEEecC--C---cEEEccC-cEEecCEEEEcccCCCccCcccc-cCc
Q 018550 229 SVA-----D-----ETHEKQPGYD-NMWLHSMVERANED--G---TVVFRNG-RVVSADVIMHCTGLTGTSTTTLF-LKP 290 (354)
Q Consensus 229 ~~~-----~-----~~~~~l~~~~-~~~~~~~v~~v~~~--~---~v~~~~g-~~~~~D~vi~a~G~~~~~p~~~~-l~~ 290 (354)
.+. + ...+.+++.+ +++.++.|+++..+ + .|++++| +++++|.||+|+|++ ||+.+ ++.
T Consensus 217 ~~~~l~~~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~---p~~~l~l~~ 293 (479)
T 2hqm_A 217 GETVLRKFDECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRK---SHLGMGSEN 293 (479)
T ss_dssp SSSSCTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEE---ECCCSSGGG
T ss_pred CCccccccCHHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCC---CccccChhh
Confidence 864 1 1222333444 88999999999753 3 2777888 789999999999999 66655 333
Q ss_pred hhhh----------------hceeeeecccchh------hHHHHHHHhhhccCCC
Q 018550 291 MALL----------------LWMTIVLGHCTST------FFRQSWHQAFHLLGYH 323 (354)
Q Consensus 291 ~~~~----------------~~~i~a~GD~~~~------~~~~~~~~~~~~~~~~ 323 (354)
.+.. ..+|||+|||... ...|+...+.++.+..
T Consensus 294 ~gl~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~~ 348 (479)
T 2hqm_A 294 VGIKLNSHDQIIADEYQNTNVPNIYSLGDVVGKVELTPVAIAAGRKLSNRLFGPE 348 (479)
T ss_dssp GTCCBCTTSCBCCCTTCBCSSTTEEECGGGTTSSCCHHHHHHHHHHHHHHHHSCG
T ss_pred cCceECCCCCEeECCCCccCCCCEEEEEecCCCcccHHHHHHHHHHHHHHhcCCC
Confidence 2221 2349999999763 3566777788887643
No 47
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.97 E-value=3.1e-31 Score=245.61 Aligned_cols=275 Identities=18% Similarity=0.190 Sum_probs=181.7
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCccccc-ccccchhcccccccccc
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSS-LYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 81 (354)
++|+|||||++|+++|..|++.|.+|+|||+++ +||+|.+. +|.|.+.++... .+..+.. .. .+++.
T Consensus 7 ~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~~--------g~iP~k~l~~~~~~~~~~~~-~~--~~g~~ 74 (464)
T 2eq6_A 7 YDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLNV--------GCIPTKALLHAAETLHHLKV-AE--GFGLK 74 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHT--------SHHHHHHHHHHHHHHHHHHH-HG--GGTEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCCc--------ChHHHHHHHHHHHHHHHHHh-HH--hcCCC
Confidence 789999999999999999999999999999976 99999873 666654433322 1111111 00 01111
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHH-------H----HHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCce
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLR-------Y----LQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVV 150 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~----l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~ 150 (354)
... .++...+.. + +...+++.+++ +..++.+. + +. . ++.+. +
T Consensus 75 ~~~--------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~--~~~g~~~~-~--~~-~--~v~v~-g---- 127 (464)
T 2eq6_A 75 AKP--------------ELDLKKLGGWRDQVVKKLTGGVGTLLKGNGVE--LLRGFARL-V--GP-K--EVEVG-G---- 127 (464)
T ss_dssp CCC--------------EECHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEESCEEE-E--ET-T--EEEET-T----
T ss_pred CCC--------------CcCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEeeeEEE-c--cC-C--EEEEc-c----
Confidence 000 001122222 2 34445566787 77765442 3 22 3 44444 3
Q ss_pred EEEEeCEEEEeeCCCCCcccCC-CCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEec
Q 018550 151 EEETFDAVVVCNGHFSVPRLAQ-VPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRS 229 (354)
Q Consensus 151 ~~~~~d~vIlAtG~~s~~~~p~-~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~ 229 (354)
.++.||+||+||| ++|+.|+ +++.. ..+++.+........+++++|||+|++|+|+|..|++.|.+|+++++.
T Consensus 128 ~~~~~d~lViATG--s~p~~p~gi~~~~----~v~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~ 201 (464)
T 2eq6_A 128 ERYGAKSLILATG--SEPLELKGFPFGE----DVWDSTRALKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYM 201 (464)
T ss_dssp EEEEEEEEEECCC--EEECCBTTBCCSS----SEECHHHHTCGGGCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred EEEEeCEEEEcCC--CCCCCCCCCCCCC----cEEcHHHHHhhhhhcCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcC
Confidence 3799999999999 7888776 65521 344444443333335799999999999999999999999999999997
Q ss_pred CC-----c-----cccccCCCCC-CeEEecceeEEecCCc---EEEc-c--Cc--EEecCEEEEcccCCCccCccccc--
Q 018550 230 VA-----D-----ETHEKQPGYD-NMWLHSMVERANEDGT---VVFR-N--GR--VVSADVIMHCTGLTGTSTTTLFL-- 288 (354)
Q Consensus 230 ~~-----~-----~~~~~l~~~~-~~~~~~~v~~v~~~~~---v~~~-~--g~--~~~~D~vi~a~G~~~~~p~~~~l-- 288 (354)
+. + ...+.+++.+ +++.++.|+++..++. ++++ + |+ ++++|.|++|+|++ |+++++
T Consensus 202 ~~~l~~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~---p~~~~l~l 278 (464)
T 2eq6_A 202 PEILPQGDPETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRK---PRTEGLGL 278 (464)
T ss_dssp SSSSTTSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCEE---ESCTTSSH
T ss_pred CccccccCHHHHHHHHHHHHhcCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCcc---cCCCCCCh
Confidence 64 1 1222333444 8899999999985432 5555 6 76 89999999999999 666653
Q ss_pred Cchhhh----------------hceeeeecccchh------hHHHHHHHhhhccCCCcc
Q 018550 289 KPMALL----------------LWMTIVLGHCTST------FFRQSWHQAFHLLGYHRR 325 (354)
Q Consensus 289 ~~~~~~----------------~~~i~a~GD~~~~------~~~~~~~~~~~~~~~~~~ 325 (354)
+..+.. ..+|||+|||+.. ...|+...+.++.+....
T Consensus 279 ~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~~l~~~A~~~g~~aa~~i~g~~~~ 337 (464)
T 2eq6_A 279 EKAGVKVDERGFIRVNARMETSVPGVYAIGDAARPPLLAHKAMREGLIAAENAAGKDSA 337 (464)
T ss_dssp HHHTCCBCTTSCBCCCTTCBCSSTTEEECGGGTCSSCCHHHHHHHHHHHHHHHTTCCCC
T ss_pred hhcCceecCCCCEEECCCcccCCCCEEEEeccCCCcccHHHHHHHHHHHHHHhcCCCcc
Confidence 221111 2349999999863 456777888888775433
No 48
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.97 E-value=1.9e-31 Score=247.25 Aligned_cols=281 Identities=17% Similarity=0.228 Sum_probs=183.5
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCccccc-ccccchhcccccccccc
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSS-LYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 81 (354)
++|+|||||++|+++|..|++.|++|+|||++ .+||.|... +|.|.+.++... .+..+...... +++.
T Consensus 4 ~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~~~--------g~~psk~ll~~~~~~~~~~~~~~~--~g~~ 72 (464)
T 2a8x_A 4 YDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCLNV--------GCIPSKALLRNAELVHIFTKDAKA--FGIS 72 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHHHH--------SHHHHHHHHHHHHHHHHHHHHTTT--TTEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCccccc--------CchhhHHHHHHHHHHHHHHHHHHh--cCCC
Confidence 79999999999999999999999999999997 788888763 444443222211 11111101100 0110
Q ss_pred ---CCCCCccCCCCCCCCCCCCCH----HHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEE
Q 018550 82 ---AYPFVARNYEGSVDLRRYPGH----EEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEET 154 (354)
Q Consensus 82 ---~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ 154 (354)
...+.. .+... ..+.+.+.+.+++.+++ ++.++.+. + +. +.+.+.+.++. ..++.
T Consensus 73 ~~~~~~~~~----------~~~~~~~~~~~l~~~l~~~~~~~gv~--~~~g~~~~-i--d~-~~v~V~~~~G~--~~~~~ 134 (464)
T 2a8x_A 73 GEVTFDYGI----------AYDRSRKVAEGRVAGVHFLMKKNKIT--EIHGYGTF-A--DA-NTLLVDLNDGG--TESVT 134 (464)
T ss_dssp ECCEECHHH----------HHHHHHHHHHHHHHHHHHHHHHTTCE--EECEEEEE-S--SS-SEEEEEETTSC--CEEEE
T ss_pred CCCccCHHH----------HHHHHHHHHHHHHHHHHHHHHhCCCE--EEEeEEEE-e--cC-CeEEEEeCCCc--eEEEE
Confidence 000000 00000 12333445666667887 77765443 2 33 55666665442 24799
Q ss_pred eCEEEEeeCCCCCcccCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC---
Q 018550 155 FDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA--- 231 (354)
Q Consensus 155 ~d~vIlAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~--- 231 (354)
||+||+||| +.|+.|+++|.+. ..+++....... ..+++++|||+|.+|+|+|..|++.|.+|+++++.+.
T Consensus 135 ~d~lViAtG--~~~~~~~~~g~~~---~~~~~~~~~~~~-~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 208 (464)
T 2a8x_A 135 FDNAIIATG--SSTRLVPGTSLSA---NVVTYEEQILSR-ELPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALP 208 (464)
T ss_dssp EEEEEECCC--EEECCCTTCCCBT---TEECHHHHHTCS-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred cCEEEECCC--CCCCCCCCCCCCc---eEEecHHHhhcc-ccCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcccc
Confidence 999999999 7888888877553 234433332222 2479999999999999999999999999999999864
Q ss_pred -------ccccccCCCCC-CeEEecceeEEecCC-c--EEEc-cC--cEEecCEEEEcccCCCccCccccc--Cchhhh-
Q 018550 232 -------DETHEKQPGYD-NMWLHSMVERANEDG-T--VVFR-NG--RVVSADVIMHCTGLTGTSTTTLFL--KPMALL- 294 (354)
Q Consensus 232 -------~~~~~~l~~~~-~~~~~~~v~~v~~~~-~--v~~~-~g--~~~~~D~vi~a~G~~~~~p~~~~l--~~~~~~- 294 (354)
+...+.+++.+ +++.++.|+++..++ . +.++ +| +++++|.|++|+|++ ||++++ +..+..
T Consensus 209 ~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~---p~~~~l~~~~~gl~~ 285 (464)
T 2a8x_A 209 NEDADVSKEIEKQFKKLGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFA---PNVEGYGLDKAGVAL 285 (464)
T ss_dssp TSCHHHHHHHHHHHHHHTCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCEE---ECCSSSCHHHHTCCB
T ss_pred ccCHHHHHHHHHHHHHcCCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCCC---ccCCCCCchhcCCcc
Confidence 11222334444 889999999998554 2 4444 56 679999999999999 777663 222211
Q ss_pred ---------------hceeeeecccchh------hHHHHHHHhhhccC
Q 018550 295 ---------------LWMTIVLGHCTST------FFRQSWHQAFHLLG 321 (354)
Q Consensus 295 ---------------~~~i~a~GD~~~~------~~~~~~~~~~~~~~ 321 (354)
..+|||+|||+.. ...|+...+.++.+
T Consensus 286 ~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g 333 (464)
T 2a8x_A 286 TDRKAIGVDDYMRTNVGHIYAIGDVNGLLQLAHVAEAQGVVAAETIAG 333 (464)
T ss_dssp CTTSSBCCCTTSBCSSTTEEECGGGGCSSCSHHHHHHHHHHHHHHHHT
T ss_pred CCCCCEeECcCCccCCCCEEEeECcCCCccCHHHHHHHHHHHHHHhcC
Confidence 2349999999873 35677777888876
No 49
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.97 E-value=3.2e-31 Score=245.28 Aligned_cols=275 Identities=18% Similarity=0.233 Sum_probs=181.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
++||+|||||++|+++|..|++.|.+|+|||++ .+||+|.+. +|.|.+.+.....+.....+.+. +++
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~--------gciP~k~l~~~a~~~~~~~~~~~--~g~- 71 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK-ALGGTCVNV--------GCVPKKVMWYASHLAEAVRDAPG--FGV- 71 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHH--------SHHHHHHHHHHHHHHHHHHHGGG--GTB-
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC-CCCCcCcCc--------CchhHHHHHHHHHHHHHHhhhhh--cCc-
Confidence 479999999999999999999999999999997 789999873 66665544333222111111111 111
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHH-----------HHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCce
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRY-----------LQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVV 150 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~ 150 (354)
.... ...++..+.++ +...+.+.+++ +..+. +..++ . +.+.+ ++
T Consensus 72 --~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~--~~~g~-~~~i~--~---~~v~~-~g---- 126 (463)
T 2r9z_A 72 --QASG----------GTLDWPRLVAGRDRYIGAINSFWDGYVERLGIT--RVDGH-ARFVD--A---HTIEV-EG---- 126 (463)
T ss_dssp --CCC-------------CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEESC-EEEEE--T---TEEEE-TT----
T ss_pred --ccCC----------CCcCHHHHHHHHHHHHHHHHHHHHHHHHHCCCE--EEEeE-EEEcc--C---CEEEE-CC----
Confidence 0000 01112333322 23334556777 66653 44442 2 34555 33
Q ss_pred EEEEeCEEEEeeCCCCCcccCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecC
Q 018550 151 EEETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (354)
Q Consensus 151 ~~~~~d~vIlAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~ 230 (354)
.++.||+||+||| +.|+.|+++|.+. ..++..+.... ..+++++|||+|.+|+|+|..|++.|.+|+++++.+
T Consensus 127 ~~~~~d~lviAtG--s~p~~p~i~G~~~----~~~~~~~~~~~-~~~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~ 199 (463)
T 2r9z_A 127 QRLSADHIVIATG--GRPIVPRLPGAEL----GITSDGFFALQ-QQPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALED 199 (463)
T ss_dssp EEEEEEEEEECCC--EEECCCSCTTGGG----SBCHHHHHHCS-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred EEEEcCEEEECCC--CCCCCCCCCCccc----eecHHHHhhhh-ccCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC
Confidence 3789999999999 8888888888642 12222221111 246899999999999999999999999999999976
Q ss_pred C----------ccccccCCCCC-CeEEecceeEEecCC---cEEEccCc-EEecCEEEEcccCCCccCccccc--Cchhh
Q 018550 231 A----------DETHEKQPGYD-NMWLHSMVERANEDG---TVVFRNGR-VVSADVIMHCTGLTGTSTTTLFL--KPMAL 293 (354)
Q Consensus 231 ~----------~~~~~~l~~~~-~~~~~~~v~~v~~~~---~v~~~~g~-~~~~D~vi~a~G~~~~~p~~~~l--~~~~~ 293 (354)
. +...+.+++.+ +++.++.|+++..++ .|++++|+ ++++|.|++|+|++ |++++| +..+.
T Consensus 200 ~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~---p~~~~l~~~~~g~ 276 (463)
T 2r9z_A 200 RLLFQFDPLLSATLAENMHAQGIETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGRA---PNTRDLGLEAAGI 276 (463)
T ss_dssp SSSTTSCHHHHHHHHHHHHHTTCEEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCEE---ESCTTSCHHHHTC
T ss_pred ccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCCC---cCCCCCCchhcCC
Confidence 4 11122333444 889999999998542 27778888 89999999999999 766633 22111
Q ss_pred ----------------hhceeeeecccchh------hHHHHHHHhhhccCCC
Q 018550 294 ----------------LLWMTIVLGHCTST------FFRQSWHQAFHLLGYH 323 (354)
Q Consensus 294 ----------------~~~~i~a~GD~~~~------~~~~~~~~~~~~~~~~ 323 (354)
...+|||+|||... ...|+...+.++.+..
T Consensus 277 ~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~~ 328 (463)
T 2r9z_A 277 EVQSNGMVPTDAYQNTNVPGVYALGDITGRDQLTPVAIAAGRRLAERLFDGQ 328 (463)
T ss_dssp CCCTTSCCCCCTTSBCSSTTEEECGGGGTSCCCHHHHHHHHHHHHHHHHSCC
T ss_pred ccCCCCCEeECCCCccCCCCEEEEeecCCCcccHHHHHHHHHHHHHHHcCCC
Confidence 12359999999862 3566777788887643
No 50
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.97 E-value=1.3e-31 Score=249.57 Aligned_cols=279 Identities=16% Similarity=0.136 Sum_probs=180.0
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhccccccccccC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (354)
+||+|||||++|+++|..|+++|.+|+|||++ .+||+|.+. +|.|.+.++..........+.+.
T Consensus 9 ~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~-~~GGtc~~~--------gciPsk~l~~~a~~~~~~~~~~~------- 72 (492)
T 3ic9_A 9 VDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGG-AYGTTCARV--------GCMPSKLLIAAADASYHASQTDL------- 72 (492)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTCSCEEEEESS-CSSCHHHHH--------SHHHHHHHHHHHHHHHHHTCGGG-------
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCcEEEEeCC-CCCCccccc--------ChhcCHHHHHHHHHHHHHhhhhh-------
Confidence 68999999999999999999999999999996 599999874 78887766554432222222221
Q ss_pred CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC----------cceEEeceEEEEEEEeCCCcEEEEEeecCCceEE
Q 018550 83 YPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGV----------DQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEE 152 (354)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----------~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~ 152 (354)
+.+... ....++..+.+++.+..+++.. ...+.. .+..-. +.+++.+.++ .+
T Consensus 73 ~g~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-g~a~~~-----~~~~v~~~~~----~~ 134 (492)
T 3ic9_A 73 FGIQVD--------RISVNGKAVMKRIQTERDRFVGFVVESVESFDEQDKIR-GFAKFL-----DEHTLQVDDH----SQ 134 (492)
T ss_dssp GTEECS--------EEEECHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGEEE-SCEEEE-----ETTEEEETTT----EE
T ss_pred cCcCCC--------CCccCHHHHHHHHHHHHHHHHHHHHHHHHhhcCeeEEE-EEEEEe-----cCCEEEEcCC----cE
Confidence 111000 0001224455554443332210 000221 111111 2345666444 38
Q ss_pred EEeCEEEEeeCCCCCcccCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC-
Q 018550 153 ETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA- 231 (354)
Q Consensus 153 ~~~d~vIlAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~- 231 (354)
+.||+||+||| +.|+.|++++... ...+++...... ...+++++|||+|++|+|+|..|++.|.+|+++.+.+.
T Consensus 135 ~~~d~lViATG--s~p~~p~~~~~~~--~~v~t~~~~~~~-~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 209 (492)
T 3ic9_A 135 VIAKRIVIATG--SRPNYPEFLAAAG--SRLLTNDNLFEL-NDLPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSV 209 (492)
T ss_dssp EEEEEEEECCC--EECCCCHHHHTTG--GGEECHHHHTTC-SSCCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCC
T ss_pred EEeCEEEEccC--CCCcCCCCCCccC--CcEEcHHHHhhh-hhcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcc
Confidence 99999999999 8888887554321 233333333322 23579999999999999999999999999999999875
Q ss_pred ---------ccccccCCCCCCeEEecceeEEecCC-c--EEEc--cC--cEEecCEEEEcccCCCccCccccc--Cchhh
Q 018550 232 ---------DETHEKQPGYDNMWLHSMVERANEDG-T--VVFR--NG--RVVSADVIMHCTGLTGTSTTTLFL--KPMAL 293 (354)
Q Consensus 232 ---------~~~~~~l~~~~~~~~~~~v~~v~~~~-~--v~~~--~g--~~~~~D~vi~a~G~~~~~p~~~~l--~~~~~ 293 (354)
+...+.+++..+++.++.|++++.++ . +.+. +| +++++|.||+|+|++ |+++++ +..+.
T Consensus 210 l~~~d~~~~~~l~~~l~~~V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~---p~~~~l~l~~~gl 286 (492)
T 3ic9_A 210 ANLQDEEMKRYAEKTFNEEFYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRK---ANVDKLGLENTSI 286 (492)
T ss_dssp TTCCCHHHHHHHHHHHHTTSEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCCE---ESCSSSCGGGSCC
T ss_pred cccCCHHHHHHHHHHHhhCcEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCCc---cCCCCCChhhcCC
Confidence 11122233336788889999997543 3 4443 67 679999999999999 666652 21111
Q ss_pred -----------------hhceeeeecccchh------hHHHHHHHhhhccCCC
Q 018550 294 -----------------LLWMTIVLGHCTST------FFRQSWHQAFHLLGYH 323 (354)
Q Consensus 294 -----------------~~~~i~a~GD~~~~------~~~~~~~~~~~~~~~~ 323 (354)
...+|||+|||+.. ...|+...+.++.++.
T Consensus 287 ~~~~~G~i~vd~~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~~ 339 (492)
T 3ic9_A 287 ELDKKNSPLFDELTLQTSVDHIFVAGDANNTLTLLHEAADDGKVAGTNAGAYP 339 (492)
T ss_dssp CBCTTCCBCCCTTTCBCSSTTEEECGGGGTSSCSHHHHHHHHHHHHHHHHHTT
T ss_pred EECCCCCEeECcccccCCCCCEEEEEecCCCCccHHHHHHHHHHHHHHHcCCC
Confidence 12349999999873 3566777788887643
No 51
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.97 E-value=5.3e-31 Score=245.41 Aligned_cols=284 Identities=17% Similarity=0.212 Sum_probs=184.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHH-cCCcEEEEe--------eCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLR-EGHTVVVYE--------KGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVN 72 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~-~g~~v~lie--------~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (354)
++||+|||||++|+++|..|++ .|.+|+||| +...+||+|.+. +|.|.+.+...........+
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~--------gciPsk~l~~~a~~~~~~~~ 74 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNV--------GCVPKKLMVTGANYMDTIRE 74 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHH--------SHHHHHHHHHHHHHHHHHHH
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCC--------CcchhhHHHHHHHHHHHHHH
Confidence 5799999999999999999999 999999999 246889999874 77776655443322211111
Q ss_pred cccccccccCCCCCccCCCCCCCCCCCCCHHHHHH-----------HHHHHHHHh-CCcceEEeceEEEEEEEeCCCcEE
Q 018550 73 LPRELMGFQAYPFVARNYEGSVDLRRYPGHEEVLR-----------YLQNFAREF-GVDQVVRLHTEVLNARLVESNKWK 140 (354)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~l~~~~~~~-~~~~~v~~~~~v~~i~~~~~~~~~ 140 (354)
... +++..- .. ....++..+.+ .+...+++. +++ +..+. +..++ . ..+.
T Consensus 75 ~~~--~g~~~~-~~----------~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~--~~~g~-~~~i~--~-~~v~ 135 (490)
T 1fec_A 75 SAG--FGWELD-RE----------SVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLT--FHQGF-GALQD--N-HTVL 135 (490)
T ss_dssp GGG--GTEECC-GG----------GCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEE--EEESE-EEEEE--T-TEEE
T ss_pred HHh--cCcccC-Cc----------ccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcE--EEEeE-EEEee--C-CEEE
Confidence 111 111000 00 00001133333 223333444 666 66653 55553 2 3333
Q ss_pred EEE---eecCCceEEEEeCEEEEeeCCCCCcccCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHh
Q 018550 141 VKS---RKKDDVVEEETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLA 217 (354)
Q Consensus 141 v~~---~~g~~~~~~~~~d~vIlAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~ 217 (354)
+.. .++. ....+.||+||+||| +.|+.|+++|.+. .+++..+... ...+++++|||+|++|+|+|..|.
T Consensus 136 v~~~~~~~g~-~~~~~~~d~lviAtG--s~p~~p~i~g~~~----~~~~~~~~~~-~~~~~~vvViGgG~ig~E~A~~l~ 207 (490)
T 1fec_A 136 VRESADPNSA-VLETLDTEYILLATG--SWPQHLGIEGDDL----CITSNEAFYL-DEAPKRALCVGGGYISIEFAGIFN 207 (490)
T ss_dssp EESSSSTTSC-EEEEEEEEEEEECCC--EEECCCCSBTGGG----CBCHHHHTTC-SSCCSEEEEECSSHHHHHHHHHHH
T ss_pred EEeeccCCCC-ceEEEEcCEEEEeCC--CCCCCCCCCCccc----eecHHHHhhh-hhcCCeEEEECCCHHHHHHHHHHH
Confidence 321 1220 014799999999999 8899888888642 2222222222 224789999999999999999999
Q ss_pred cc---CCEEEEEEecCC----------ccccccCCCCC-CeEEecceeEEecC--C--cEEEccCcEEecCEEEEcccCC
Q 018550 218 GF---AKEVHIASRSVA----------DETHEKQPGYD-NMWLHSMVERANED--G--TVVFRNGRVVSADVIMHCTGLT 279 (354)
Q Consensus 218 ~~---g~~v~~~~r~~~----------~~~~~~l~~~~-~~~~~~~v~~v~~~--~--~v~~~~g~~~~~D~vi~a~G~~ 279 (354)
+. |.+|+++++.+. ....+.+++.+ +++.++.|+++..+ + .|++++|+++++|.||+|+|+.
T Consensus 208 ~~~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~ 287 (490)
T 1fec_A 208 AYKARGGQVDLAYRGDMILRGFDSELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRV 287 (490)
T ss_dssp HHSCTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEE
T ss_pred hhccCcCeEEEEEcCCCcccccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCC
Confidence 99 999999999874 11223334455 89999999999854 2 2677888899999999999999
Q ss_pred CccCcccc--cCchhhh----------------hceeeeecccchh------hHHHHHHHhhhccCCC
Q 018550 280 GTSTTTLF--LKPMALL----------------LWMTIVLGHCTST------FFRQSWHQAFHLLGYH 323 (354)
Q Consensus 280 ~~~p~~~~--l~~~~~~----------------~~~i~a~GD~~~~------~~~~~~~~~~~~~~~~ 323 (354)
|++++ ++..+.. ..+|||+|||+.. ...|+...+.++.+..
T Consensus 288 ---p~~~~L~l~~~gl~~~~~G~I~Vd~~~~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~~ 352 (490)
T 1fec_A 288 ---PRSQTLQLEKAGVEVAKNGAIKVDAYSKTNVDNIYAIGDVTDRVMLTPVAINEGAAFVDTVFANK 352 (490)
T ss_dssp ---ESCTTSCGGGGTCCBCTTSCBCCCTTCBCSSTTEEECGGGGCSCCCHHHHHHHHHHHHHHHHSSC
T ss_pred ---cCccccCchhcCccCCCCCCEEECCCCccCCCCEEEEeccCCCccCHHHHHHHHHHHHHHhcCCC
Confidence 77663 3322221 2349999999873 3566777788887643
No 52
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.97 E-value=1e-30 Score=243.34 Aligned_cols=288 Identities=16% Similarity=0.126 Sum_probs=184.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC------CccceeecCCCCCCCCCCCCCCCCcccccc-cccchhcc
Q 018550 1 MFRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE------QVGGSWIYTSETESDPLGVDPNRYPVHSSL-YKSLRVNL 73 (354)
Q Consensus 1 ~~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~------~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 73 (354)
+++||+|||||++|+++|..|++.|++|+|||+++ .+||+|.+. +|.|.+.+..... +..+....
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~--------gciPsk~l~~~~~~~~~~~~~~ 73 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNV--------GCIPSKALLDSSYKFHEAHESF 73 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHH--------SHHHHHHHHHHHHHHHHHHTTS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccc--------cHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999975 367777663 6666554433221 11111111
Q ss_pred ccccccccCCCCCccCCCCCCCCCCCCCHHHH-----------HHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEE
Q 018550 74 PRELMGFQAYPFVARNYEGSVDLRRYPGHEEV-----------LRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVK 142 (354)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~ 142 (354)
....+.... ...++..+ ...+....++.+++ +..+. +..+ +. +.+.+.
T Consensus 74 ~~~g~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~g~-~~~~--~~-~~~~v~ 132 (476)
T 3lad_A 74 KLHGISTGE---------------VAIDVPTMIARKDQIVRNLTGGVASLIKANGVT--LFEGH-GKLL--AG-KKVEVT 132 (476)
T ss_dssp GGGTEECSC---------------CEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCE--EEESE-EEEC--ST-TCEEEE
T ss_pred HhcCcccCC---------------CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEeE-EEEe--cC-CEEEEE
Confidence 111000000 00111222 22233444556777 66543 3222 22 556666
Q ss_pred EeecCCceEEEEeCEEEEeeCCCCCcccCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCCE
Q 018550 143 SRKKDDVVEEETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKE 222 (354)
Q Consensus 143 ~~~g~~~~~~~~~d~vIlAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~ 222 (354)
..++. ...+.||+||+||| +.|+.|+..+... ...+++...... ...+++++|||+|++|+|+|..|++.|.+
T Consensus 133 ~~~g~--~~~~~~d~lvlAtG--~~p~~~~~~~~~~--~~v~~~~~~~~~-~~~~~~v~ViGgG~~g~e~A~~l~~~g~~ 205 (476)
T 3lad_A 133 AADGS--SQVLDTENVILASG--SKPVEIPPAPVDQ--DVIVDSTGALDF-QNVPGKLGVIGAGVIGLELGSVWARLGAE 205 (476)
T ss_dssp CTTSC--EEEECCSCEEECCC--EEECCCTTSCCCS--SSEEEHHHHTSC-SSCCSEEEEECCSHHHHHHHHHHHHTTCE
T ss_pred cCCCc--eEEEEcCEEEEcCC--CCCCCCCCCCCCc--ccEEechhhhcc-ccCCCeEEEECCCHHHHHHHHHHHHcCCc
Confidence 54432 35899999999999 7777665444322 234444333332 23579999999999999999999999999
Q ss_pred EEEEEecCC----------ccccccCCCCC-CeEEecceeEEecCCc---EEEccC---cEEecCEEEEcccCCCccCcc
Q 018550 223 VHIASRSVA----------DETHEKQPGYD-NMWLHSMVERANEDGT---VVFRNG---RVVSADVIMHCTGLTGTSTTT 285 (354)
Q Consensus 223 v~~~~r~~~----------~~~~~~l~~~~-~~~~~~~v~~v~~~~~---v~~~~g---~~~~~D~vi~a~G~~~~~p~~ 285 (354)
|+++.+.+. +...+.+++.+ +++.++.|++++.++. +++.++ +++++|.||+|+|++ |++
T Consensus 206 Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~---p~~ 282 (476)
T 3lad_A 206 VTVLEAMDKFLPAVDEQVAKEAQKILTKQGLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRR---PVT 282 (476)
T ss_dssp EEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEE---ECC
T ss_pred EEEEecCCCcCcccCHHHHHHHHHHHHhCCCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCc---ccC
Confidence 999999874 11223344455 8899999999985442 566654 678999999999999 666
Q ss_pred ccc--Cchhhh----------------hceeeeecccchh------hHHHHHHHhhhccCCCcccc
Q 018550 286 LFL--KPMALL----------------LWMTIVLGHCTST------FFRQSWHQAFHLLGYHRRLS 327 (354)
Q Consensus 286 ~~l--~~~~~~----------------~~~i~a~GD~~~~------~~~~~~~~~~~~~~~~~~~~ 327 (354)
+++ ...+.. ..+|||+|||+.. ...|+...+.++.+......
T Consensus 283 ~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~ 348 (476)
T 3lad_A 283 TDLLAADSGVTLDERGFIYVDDYCATSVPGVYAIGDVVRGAMLAHKASEEGVVVAERIAGHKAQMN 348 (476)
T ss_dssp TTCCSSCCSCCBCTTSCBCCCTTSBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHHHCCCCCC
T ss_pred CCCCccccCccccCCCCEeeCCCcccCCCCEEEEEccCCCcccHHHHHHHHHHHHHHhcCCCcccC
Confidence 542 221111 2349999999952 45677777888876554433
No 53
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.97 E-value=3.1e-31 Score=245.29 Aligned_cols=278 Identities=17% Similarity=0.153 Sum_probs=183.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCccccc-ccccchhccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSS-LYKSLRVNLPRELMGF 80 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 80 (354)
++||+|||||++|+++|..|++.|.+|+|||+++.+||.|.+. +|.|.+.++... .+..+.. .. +++
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~--------g~~p~k~l~~~~~~~~~~~~--~~--~g~ 68 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRV--------GCIPSKALLETTERIYEAKK--GL--LGA 68 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHH--------SHHHHHHHHHHHHHHHHHHH--CC--TTE
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCcccee--------cchhHHHHHHHHHHHHHHhh--hc--CCc
Confidence 3789999999999999999999999999999988899999873 566554333221 1111111 10 111
Q ss_pred cCCCCCccCCCCCCCCCCCCCHHHHH-----------HHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCc
Q 018550 81 QAYPFVARNYEGSVDLRRYPGHEEVL-----------RYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDV 149 (354)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~ 149 (354)
. .... ..+...+. ..+.+.+++.+++ +..+..+ .+ +. +.+.+.+ ++
T Consensus 69 ~---~~~~----------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~--~~~g~~~-~i--~~-~~~~v~~-~g--- 125 (455)
T 2yqu_A 69 K---VKGV----------ELDLPALMAHKDKVVQANTQGVEFLFKKNGIA--RHQGTAR-FL--SE-RKVLVEE-TG--- 125 (455)
T ss_dssp E---ECCE----------EECHHHHHHHHHHHHHHHHHHHHHHHHHHTCE--EEESCEE-ES--SS-SEEEETT-TC---
T ss_pred c---cCCC----------ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEeEEE-Ee--cC-CeEEEee-CC---
Confidence 0 0000 00112222 2234555666887 7776543 22 22 4444433 33
Q ss_pred eEEEEeCEEEEeeCCCCCcccCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEec
Q 018550 150 VEEETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRS 229 (354)
Q Consensus 150 ~~~~~~d~vIlAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~ 229 (354)
.++.||+||+||| +.|+.|++++.... ..+++....... ..+++++|||+|++|+|+|..|++.|.+|+++++.
T Consensus 126 -~~~~~d~lviAtG--~~p~~~~~~g~~~~--~v~~~~~~~~~~-~~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~ 199 (455)
T 2yqu_A 126 -EELEARYILIATG--SAPLIPPWAQVDYE--RVVTSTEALSFP-EVPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYM 199 (455)
T ss_dssp -CEEEEEEEEECCC--EEECCCTTBCCCSS--SEECHHHHTCCS-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred -EEEEecEEEECCC--CCCCCCCCCCCCcC--cEechHHhhccc-cCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecC
Confidence 3799999999999 78888887775431 234443333322 24689999999999999999999999999999987
Q ss_pred CC----------ccccccCCCCC-CeEEecceeEEecCC-c--EEEccCcEEecCEEEEcccCCCccCcccc--cCchhh
Q 018550 230 VA----------DETHEKQPGYD-NMWLHSMVERANEDG-T--VVFRNGRVVSADVIMHCTGLTGTSTTTLF--LKPMAL 293 (354)
Q Consensus 230 ~~----------~~~~~~l~~~~-~~~~~~~v~~v~~~~-~--v~~~~g~~~~~D~vi~a~G~~~~~p~~~~--l~~~~~ 293 (354)
+. +...+.+++.+ +++.++.|+++..++ . +.+++|+++++|.||+|+|+. |++++ ++..+.
T Consensus 200 ~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~---p~~~~l~~~~~g~ 276 (455)
T 2yqu_A 200 DRILPTMDLEVSRAAERVFKKQGLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRR---PYTEGLSLENAGL 276 (455)
T ss_dssp SSSCTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEE---ECCTTCCGGGGTC
T ss_pred CccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCC---cCCCCCChhhcCC
Confidence 64 11222333344 889999999998543 2 455678899999999999999 65554 222211
Q ss_pred h----------------hceeeeecccchh------hHHHHHHHhhhccCCC
Q 018550 294 L----------------LWMTIVLGHCTST------FFRQSWHQAFHLLGYH 323 (354)
Q Consensus 294 ~----------------~~~i~a~GD~~~~------~~~~~~~~~~~~~~~~ 323 (354)
. ..+||++|||... ...|+...+.++.+..
T Consensus 277 ~~~~~g~i~vd~~~~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~~ 328 (455)
T 2yqu_A 277 STDERGRIPVDEHLRTRVPHIYAIGDVVRGPMLAHKASEEGIAAVEHMVRGF 328 (455)
T ss_dssp CCCTTSCCCCCTTSBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHHHSC
T ss_pred ccCCCCcEeECCCcccCCCCEEEEecCCCCccCHHHHHHhHHHHHHHHcCCC
Confidence 1 2359999999873 3567777788887643
No 54
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.97 E-value=8.4e-31 Score=243.19 Aligned_cols=281 Identities=18% Similarity=0.248 Sum_probs=181.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
+++|+|||||++|+++|..|++.|.+|+|||++ .+||+|.+. +|.|.+.++............+.. .++
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~~--------g~ip~k~l~~~~~~~~~~~~~~~~-~g~- 72 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCVNV--------GCVPSKIMIRAAHIAHLRRESPFD-GGI- 72 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHHHH--------SHHHHHHHHHHHHHHHHHHCCTTT-TTS-
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCccccCC--------CccchHHHHHHHHHHHHHhhhhhc-CCc-
Confidence 479999999999999999999999999999997 799999874 666654433322221111111110 000
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHH-------HHHH-----HHHHHh-CCcceEEeceEEEEEEEeCCCcEEEEEeecCC
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVL-------RYLQ-----NFAREF-GVDQVVRLHTEVLNARLVESNKWKVKSRKKDD 148 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~l~-----~~~~~~-~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~ 148 (354)
+.. ........+. ++++ +.+++. +++ +..+ ++..++ . +.+.+.+.++.
T Consensus 73 --~~~----------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~--~~~g-~~~~~~--~-~~~~v~~~~g~- 133 (467)
T 1zk7_A 73 --AAT----------VPTIDRSKLLAQQQARVDELRHAKYEGILGGNPAIT--VVHG-EARFKD--D-QSLTVRLNEGG- 133 (467)
T ss_dssp --CCC----------CCCCCHHHHHHHHHHHHHHHHHHHTHHHHTTCTTEE--EEEE-EEEEEE--T-TEEEEEETTSS-
T ss_pred --cCC----------CCccCHHHHHHHHHHHHHHHhhhhHHHHHhccCCeE--EEEE-EEEEcc--C-CEEEEEeCCCc-
Confidence 000 0001112222 2222 222223 444 5443 455443 2 55666665442
Q ss_pred ceEEEEeCEEEEeeCCCCCcccCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEe
Q 018550 149 VVEEETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASR 228 (354)
Q Consensus 149 ~~~~~~~d~vIlAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r 228 (354)
..++.||+||+||| +.|+.|+++|.+.. ..++..+.... ...+++++|||+|++|+|+|..|++.|.+|+++++
T Consensus 134 -~~~~~~d~lviAtG--s~p~~p~i~G~~~~--~~~~~~~~~~~-~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~ 207 (467)
T 1zk7_A 134 -ERVVMFDRCLVATG--ASPAVPPIPGLKES--PYWTSTEALAS-DTIPERLAVIGSSVVALELAQAFARLGSKVTVLAR 207 (467)
T ss_dssp -EEEEECSEEEECCC--EEECCCCCTTTTTS--CCBCHHHHHHC-SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred -eEEEEeCEEEEeCC--CCCCCCCCCCCCcC--ceecHHHHhcc-cccCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEE
Confidence 24799999999999 88999999887542 12222222221 12479999999999999999999999999999998
Q ss_pred cCC---------ccccccCCCCC-CeEEecceeEEecCCc---EEEccCcEEecCEEEEcccCCCccCccccc--Cchhh
Q 018550 229 SVA---------DETHEKQPGYD-NMWLHSMVERANEDGT---VVFRNGRVVSADVIMHCTGLTGTSTTTLFL--KPMAL 293 (354)
Q Consensus 229 ~~~---------~~~~~~l~~~~-~~~~~~~v~~v~~~~~---v~~~~g~~~~~D~vi~a~G~~~~~p~~~~l--~~~~~ 293 (354)
.+. +...+.+++.+ +++.++.|+++..++. |.++ +.++++|.||+|+|+. |+++++ ...+.
T Consensus 208 ~~~~l~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~-~~~i~aD~Vv~a~G~~---p~~~~l~l~~~gl 283 (467)
T 1zk7_A 208 NTLFFREDPAIGEAVTAAFRAEGIEVLEHTQASQVAHMDGEFVLTTT-HGELRADKLLVATGRT---PNTRSLALDAAGV 283 (467)
T ss_dssp SCTTTTSCHHHHHHHHHHHHHTTCEEETTCCEEEEEEETTEEEEEET-TEEEEESEEEECSCEE---ESCTTSCGGGGTC
T ss_pred CCccCCCCHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEC-CcEEEcCEEEECCCCC---cCCCcCCchhcCC
Confidence 763 11222333444 8888999999985443 4444 5689999999999999 666542 22211
Q ss_pred h----------------hceeeeecccchh------hHHHHHHHhhhccCC
Q 018550 294 L----------------LWMTIVLGHCTST------FFRQSWHQAFHLLGY 322 (354)
Q Consensus 294 ~----------------~~~i~a~GD~~~~------~~~~~~~~~~~~~~~ 322 (354)
. ..+|||+|||+.. ...|+...+.++.+.
T Consensus 284 ~~~~~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 334 (467)
T 1zk7_A 284 TVNAQGAIVIDQGMRTSNPNIYAAGDCTDQPQFVYVAAAAGTRAAINMTGG 334 (467)
T ss_dssp CBCTTSCBCCCTTCBCSSTTEEECSTTBSSCCCHHHHHHHHHHHHHHHTTC
T ss_pred cCCCCCCEEECCCcccCCCCEEEEeccCCCcccHHHHHHHHHHHHHHHcCC
Confidence 1 2349999999873 346777778788664
No 55
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.97 E-value=4.8e-31 Score=244.47 Aligned_cols=285 Identities=15% Similarity=0.153 Sum_probs=185.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
++||+|||||++|+++|..|+++|++|+|||+ +.+||+|.+. +|.|.+.+...........+.+...+...
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~--------gcip~k~l~~~~~~~~~~~~~~~~g~~~~ 75 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCVIR--------GCVPKKLYVYASQFAEHFEDAAGFGWTVG 75 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHHHH--------SHHHHHHHHHHHHHHHHHHHGGGGTEEEC
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCccccc--------CchhhHHHHHHHHHHHHHHHHHhcCcccC
Confidence 36999999999999999999999999999999 6899999873 66666544433322222222211111100
Q ss_pred --CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEe-ecCCceEEEEeCEE
Q 018550 82 --AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSR-KKDDVVEEETFDAV 158 (354)
Q Consensus 82 --~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~-~g~~~~~~~~~d~v 158 (354)
.+.+..... . .......+..++.....+.+++ +..+ ++..+ +...+.+. ++ ..+.+|++
T Consensus 76 ~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~gv~--~~~g-~~~~i-----~~~~v~~~~~~----~~~~~d~l 137 (463)
T 4dna_A 76 ESRFDWAKLVA----A--KEQEIARLEGLYRKGLANAGAE--ILDT-RAELA-----GPNTVKLLASG----KTVTAERI 137 (463)
T ss_dssp CCEECHHHHHH----H--HHHHHHHHHHHHHHHHHHHTCE--EEES-CEEES-----SSSEEEETTTT----EEEEEEEE
T ss_pred CCCcCHHHHHH----H--HHHHHHHHHHHHHHHHHhCCCE--EEEE-EEEEe-----eCCEEEEecCC----eEEEeCEE
Confidence 000000000 0 0000013334445555666777 5554 34333 22355552 22 48999999
Q ss_pred EEeeCCCCCcc-cCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC------
Q 018550 159 VVCNGHFSVPR-LAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA------ 231 (354)
Q Consensus 159 IlAtG~~s~~~-~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~------ 231 (354)
|+||| +.|. .|.++|.+. ..++...... ...+++++|||+|++|+|+|..+++.|.+|+++.+.+.
T Consensus 138 viAtG--~~p~~~p~i~G~~~----~~~~~~~~~~-~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~~~ 210 (463)
T 4dna_A 138 VIAVG--GHPSPHDALPGHEL----CITSNEAFDL-PALPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSRFD 210 (463)
T ss_dssp EECCC--EEECCCTTSTTGGG----CBCHHHHTTC-SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSC
T ss_pred EEecC--CCcccCCCCCCccc----cccHHHHhhh-hcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccccC
Confidence 99999 8888 888888653 1222222222 23579999999999999999999999999999998764
Q ss_pred ----ccccccCCCCC-CeEEecceeEEecC--C--cEE-EccCcEEecCEEEEcccCCCccCccccc--Cchhhh-----
Q 018550 232 ----DETHEKQPGYD-NMWLHSMVERANED--G--TVV-FRNGRVVSADVIMHCTGLTGTSTTTLFL--KPMALL----- 294 (354)
Q Consensus 232 ----~~~~~~l~~~~-~~~~~~~v~~v~~~--~--~v~-~~~g~~~~~D~vi~a~G~~~~~p~~~~l--~~~~~~----- 294 (354)
+...+.+++.+ +++.++.|+++..+ + .|. +.+|+ +++|.||+|+|+. |+++++ +..+..
T Consensus 211 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~---p~~~~l~l~~~g~~~~~~G 286 (463)
T 4dna_A 211 QDMRRGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGRM---PNTNGLGLEAAGVRTNELG 286 (463)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCEE---ESCTTSSTGGGTCCBCTTS
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCcc---cCCCCCCccccCceECCCC
Confidence 11222334444 88999999999854 3 266 66777 9999999999999 776653 222221
Q ss_pred -----------hceeeeecccchh------hHHHHHHHhhhccCCCc
Q 018550 295 -----------LWMTIVLGHCTST------FFRQSWHQAFHLLGYHR 324 (354)
Q Consensus 295 -----------~~~i~a~GD~~~~------~~~~~~~~~~~~~~~~~ 324 (354)
..+|||+|||+.. ...|+...+.++.+...
T Consensus 287 ~i~vd~~~~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~ 333 (463)
T 4dna_A 287 AIIVDAFSRTSTPGIYALGDVTDRVQLTPVAIHEAMCFIETEYKNNP 333 (463)
T ss_dssp CBCCCTTCBCSSTTEEECSGGGSSCCCHHHHHHHHHHHHHHHHSSCC
T ss_pred CEeECcCCCCCCCCEEEEEecCCCCCChHHHHHHHHHHHHHHcCCCC
Confidence 2349999999972 35677777888876543
No 56
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.97 E-value=5.3e-31 Score=245.41 Aligned_cols=285 Identities=14% Similarity=0.154 Sum_probs=182.4
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhccccccccccC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (354)
+||+|||||++|+++|..|+++|.+|+|||+ +.+||.|.+. +|.|.+.++............+...+....
T Consensus 27 ~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~--------gcip~k~l~~~a~~~~~~~~~~~~g~~~~~ 97 (484)
T 3o0h_A 27 FDLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTCVIR--------GCVPKKLYFYASQYAQEFSKSIGFGWKYAD 97 (484)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHHHH--------SHHHHHHHHHHHHHHHHHHHHGGGTBCCCC
T ss_pred CCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCceecc--------CccccHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 6999999999999999999999999999999 6899999874 666665444333222211111111110000
Q ss_pred --CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEe-ecCCceEEEEeCEEE
Q 018550 83 --YPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSR-KKDDVVEEETFDAVV 159 (354)
Q Consensus 83 --~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~-~g~~~~~~~~~d~vI 159 (354)
+.+.... .. .......+..++.....+.+++ +..+ ++..++ . ..+.+. ++ ..+.+|++|
T Consensus 98 ~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~v~--~~~g-~~~~i~--~---~~v~v~~~~----~~~~~d~lv 159 (484)
T 3o0h_A 98 PIFNWEKLV----AA--KNKEISRLEGLYREGLQNSNVH--IYES-RAVFVD--E---HTLELSVTG----ERISAEKIL 159 (484)
T ss_dssp CEECHHHHH----HH--HHHHHHHHHHHHHHHHHHTTCE--EEES-CEEEEE--T---TEEEETTTC----CEEEEEEEE
T ss_pred CccCHHHHH----HH--HHHHHHHHHHHHHHHHHhCCCE--EEEe-EEEEee--C---CEEEEecCC----eEEEeCEEE
Confidence 0000000 00 0000023334445555666777 5554 444443 1 245553 33 389999999
Q ss_pred EeeCCCCCcc-cCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC-------
Q 018550 160 VCNGHFSVPR-LAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA------- 231 (354)
Q Consensus 160 lAtG~~s~~~-~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~------- 231 (354)
+||| +.|. .|.++|.+. ..++..+... ...+++++|||+|++|+|+|..+++.|.+|+++.+.+.
T Consensus 160 iAtG--~~p~~~p~i~G~~~----~~~~~~~~~~-~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~~~ 232 (484)
T 3o0h_A 160 IATG--AKIVSNSAIKGSDL----CLTSNEIFDL-EKLPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILRNFDY 232 (484)
T ss_dssp ECCC--EEECCC--CBTGGG----SBCTTTGGGC-SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCH
T ss_pred EccC--CCcccCCCCCCccc----cccHHHHHhH-HhcCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccccccCH
Confidence 9999 7888 888888653 1222222221 23578999999999999999999999999999998764
Q ss_pred ---ccccccCCCCC-CeEEecceeEEecCCc---EEEccCcEEecCEEEEcccCCCccCcccccC--chhhh--------
Q 018550 232 ---DETHEKQPGYD-NMWLHSMVERANEDGT---VVFRNGRVVSADVIMHCTGLTGTSTTTLFLK--PMALL-------- 294 (354)
Q Consensus 232 ---~~~~~~l~~~~-~~~~~~~v~~v~~~~~---v~~~~g~~~~~D~vi~a~G~~~~~p~~~~l~--~~~~~-------- 294 (354)
....+.+++.+ +++.++.|++++.++. |++.+|+++++|.||+|+|+. |+++++. ..+..
T Consensus 233 ~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~~---p~~~~l~l~~~g~~~~~~G~i~ 309 (484)
T 3o0h_A 233 DLRQLLNDAMVAKGISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGRV---PNTTGLGLERAGVKVNEFGAVV 309 (484)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEE---ECCTTCCHHHHTCCBCTTSCBC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCCC---cCCCCCChhhcCceECCCCCEe
Confidence 11222233344 8888999999986532 777888899999999999999 6666531 11111
Q ss_pred --------hceeeeecccch------hhHHHHHHHhhhccCCCc
Q 018550 295 --------LWMTIVLGHCTS------TFFRQSWHQAFHLLGYHR 324 (354)
Q Consensus 295 --------~~~i~a~GD~~~------~~~~~~~~~~~~~~~~~~ 324 (354)
..+|||+|||+. ....|+...+.++.+...
T Consensus 310 vd~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~~~ 353 (484)
T 3o0h_A 310 VDEKMTTNVSHIWAVGDVTGHIQLTPVAIHDAMCFVKNAFENTS 353 (484)
T ss_dssp CCTTSBCSSTTEEECGGGGTSCCCHHHHHHHHHHHHHHHHC---
T ss_pred ECCCCCCCCCCEEEEEecCCCCcCHHHHHHHHHHHHHHHcCCCC
Confidence 234999999998 245677777888876543
No 57
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=99.97 E-value=2.8e-30 Score=235.34 Aligned_cols=254 Identities=17% Similarity=0.171 Sum_probs=176.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCC--cEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGH--TVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMG 79 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~--~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (354)
+++|+|||||++|+++|..|++.|. +|+|||+++.++..... ....+...
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~---------------------~~~~~~~~------- 58 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPP---------------------LSKDFMAH------- 58 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCSGG---------------------GGTHHHHH-------
T ss_pred CCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccCCC---------------------CCHHHhCC-------
Confidence 5789999999999999999999998 59999997643210000 00000000
Q ss_pred ccCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEE
Q 018550 80 FQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVV 159 (354)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vI 159 (354)
.. .. ++ ++. .+.+.+++ ++.+++|+.++. ..+++.+.++. ++.||+||
T Consensus 59 --~~--~~----------------~~--~~~-~~~~~~v~--~~~~~~v~~i~~---~~~~v~~~~g~----~~~~d~lv 106 (408)
T 2gqw_A 59 --GD--AE----------------KI--RLD-CKRAPEVE--WLLGVTAQSFDP---QAHTVALSDGR----TLPYGTLV 106 (408)
T ss_dssp --CC--GG----------------GS--BCC-CTTSCSCE--EEETCCEEEEET---TTTEEEETTSC----EEECSEEE
T ss_pred --Cc--hh----------------hh--hHH-HHHHCCCE--EEcCCEEEEEEC---CCCEEEECCCC----EEECCEEE
Confidence 00 00 00 000 12345677 888888999875 34677776654 79999999
Q ss_pred EeeCCCCCcccCCC-CCCCCCCcceeecccCC-----CCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC--
Q 018550 160 VCNGHFSVPRLAQV-PGIDSWPGKQMHSHNYR-----IPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA-- 231 (354)
Q Consensus 160 lAtG~~s~~~~p~~-~g~~~~~~~~~~~~~~~-----~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~-- 231 (354)
+||| +.|+.|++ +|.+. .+++..... ......+++++|||+|.+|+|+|..|++.|.+|+++++.+.
T Consensus 107 iAtG--~~~~~~~i~~G~~~---~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 181 (408)
T 2gqw_A 107 LATG--AAPRALPTLQGATM---PVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLM 181 (408)
T ss_dssp ECCC--EEECCCGGGTTCSS---CEEECCSHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS
T ss_pred ECCC--CCCCCCCccCCCCC---cEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccc
Confidence 9999 78888888 88651 222221111 11123479999999999999999999999999999999764
Q ss_pred c---------cccccCCCCC-CeEEecceeEEecCCcEEEccCcEEecCEEEEcccCCCccCcccccCchhhh-------
Q 018550 232 D---------ETHEKQPGYD-NMWLHSMVERANEDGTVVFRNGRVVSADVIMHCTGLTGTSTTTLFLKPMALL------- 294 (354)
Q Consensus 232 ~---------~~~~~l~~~~-~~~~~~~v~~v~~~~~v~~~~g~~~~~D~vi~a~G~~~~~p~~~~l~~~~~~------- 294 (354)
. ...+.+++.+ +++.++.|+++. ++.|++++|+++++|.||+|+|++ |++++++..+..
T Consensus 182 ~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~~~v~~~~g~~i~~D~vi~a~G~~---p~~~l~~~~gl~~~~gi~V 257 (408)
T 2gqw_A 182 SRAAPATLADFVARYHAAQGVDLRFERSVTGSV-DGVVLLDDGTRIAADMVVVGIGVL---ANDALARAAGLACDDGIFV 257 (408)
T ss_dssp TTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEE-TTEEEETTSCEEECSEEEECSCEE---ECCHHHHHHTCCBSSSEEC
T ss_pred ccccCHHHHHHHHHHHHHcCcEEEeCCEEEEEE-CCEEEECCCCEEEcCEEEECcCCC---ccHHHHHhCCCCCCCCEEE
Confidence 1 1122234445 899999999998 446888899999999999999999 777776544321
Q ss_pred -------hceeeeecccchh----------------hHHHHHHHhhhccCCCc
Q 018550 295 -------LWMTIVLGHCTST----------------FFRQSWHQAFHLLGYHR 324 (354)
Q Consensus 295 -------~~~i~a~GD~~~~----------------~~~~~~~~~~~~~~~~~ 324 (354)
..+|||+|||+.. ...|+...|.++.+...
T Consensus 258 d~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~ 310 (408)
T 2gqw_A 258 DAYGRTTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVDPTA 310 (408)
T ss_dssp CTTCBCSSTTEEECGGGEEEEETTTTEEECCCCHHHHHHHHHHHHHHHHCTTS
T ss_pred CCCCccCCCCEEEEEEEEEecCccCCceeeccHHHHHHHHHHHHHHHhcCCCC
Confidence 2459999999863 24566677888876544
No 58
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.96 E-value=3.8e-30 Score=238.80 Aligned_cols=287 Identities=21% Similarity=0.220 Sum_probs=182.7
Q ss_pred CeEEEEcCChHHHHHHHHHHHcC-----CcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccc
Q 018550 3 RHVAVIGAGAAGLVVGHELLREG-----HTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPREL 77 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g-----~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (354)
++|+|||||++|+++|..|++.| .+|+|||+.+.+| |....-. +...+..+...+......|...
T Consensus 31 ~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g--~~~~~~~--------~~~~~~~~~~~~l~~~~~p~~~ 100 (463)
T 3s5w_A 31 HDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYR--WHGNTLV--------SQSELQISFLKDLVSLRNPTSP 100 (463)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCC--SSGGGCC--------SSCBCSSCTTSSSSTTTCTTCT
T ss_pred CCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCC--CcCCCCC--------CCCcCCcchhhccccccCCCCC
Confidence 48999999999999999999999 9999999988776 3331000 0000000000000000111111
Q ss_pred ccccCCCCCccCC-CCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeC--CCcE--EEEEeecCCceEE
Q 018550 78 MGFQAYPFVARNY-EGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVE--SNKW--KVKSRKKDDVVEE 152 (354)
Q Consensus 78 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~--~~~~--~v~~~~g~~~~~~ 152 (354)
+.+.++....... ........|+.+.++.+|+.+++++++.. ++++++|++++..+ ++.| ++++.++.+...+
T Consensus 101 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~ 178 (463)
T 3s5w_A 101 YSFVNYLHKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQ--SRYGEEVLRIEPMLSAGQVEALRVISRNADGEELV 178 (463)
T ss_dssp TSHHHHHHHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTT--EEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEE
T ss_pred CChhHhhhhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCe--EEeCCEEEEEEEecCCCceEEEEEEEecCCCceEE
Confidence 1111000000000 00012345677899999999999998888 99999999999862 1444 6777776555558
Q ss_pred EEeCEEEEeeCCCCCcccCCCCCCCCCCc--ceeecccCCCC-CCC-----CCCeEEEEccCCCHHHHHHHHhcc--CCE
Q 018550 153 ETFDAVVVCNGHFSVPRLAQVPGIDSWPG--KQMHSHNYRIP-NPF-----QDQVVILIGHYASGLDIKRDLAGF--AKE 222 (354)
Q Consensus 153 ~~~d~vIlAtG~~s~~~~p~~~g~~~~~~--~~~~~~~~~~~-~~~-----~~~~v~ViG~G~~g~e~a~~l~~~--g~~ 222 (354)
+.||+||+||| +.|+.|.. ...+.+ ..+++..+... ... .+++|+|||+|.+|+|+|..|++. +.+
T Consensus 179 ~~~d~lVlAtG--~~p~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~sg~e~a~~l~~~~~~~~ 254 (463)
T 3s5w_A 179 RTTRALVVSPG--GTPRIPQV--FRALKGDGRVFHHSQYLEHMAKQPCSSGKPMKIAIIGGGQSAAEAFIDLNDSYPSVQ 254 (463)
T ss_dssp EEESEEEECCC--CEECCCGG--GGGGTTCTTEEEGGGHHHHHCC-------CEEEEEECCSHHHHHHHHHHHHHCTTEE
T ss_pred EEeCEEEECCC--CCCCCcch--hhhcCCCCcEEECHHHHhhHHHhhhcccCCCeEEEECCCHhHHHHHHHHHhcCCCCe
Confidence 99999999999 67776652 223333 45666554331 222 579999999999999999999998 899
Q ss_pred EEEEEecCCc------------------------------cccccCC---------------------------CCCCeE
Q 018550 223 VHIASRSVAD------------------------------ETHEKQP---------------------------GYDNMW 245 (354)
Q Consensus 223 v~~~~r~~~~------------------------------~~~~~l~---------------------------~~~~~~ 245 (354)
|++++|++.- ..++.+. ...+++
T Consensus 255 Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~ 334 (463)
T 3s5w_A 255 ADMILRASALKPADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNYSVVDTDLIERIYGVFYRQKVSGIPRHAFR 334 (463)
T ss_dssp EEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCCCCSEEE
T ss_pred EEEEEeCCCCcCccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhccCCCcCCHHHHHHHHHHHHHHHhcCCCCeEEE
Confidence 9999998730 0011111 123788
Q ss_pred EecceeEEecCCc---EEEc---cCc--EEecCEEEEcccCCCccCcccccCchhhh------------------hceee
Q 018550 246 LHSMVERANEDGT---VVFR---NGR--VVSADVIMHCTGLTGTSTTTLFLKPMALL------------------LWMTI 299 (354)
Q Consensus 246 ~~~~v~~v~~~~~---v~~~---~g~--~~~~D~vi~a~G~~~~~p~~~~l~~~~~~------------------~~~i~ 299 (354)
.++.|+++..++. |++. +|+ ++++|.||+|||++|+ |..+++.+.... ..+||
T Consensus 335 ~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~-~~~~~l~~l~~~~g~i~v~~~~~~~~~~~~~~~If 413 (463)
T 3s5w_A 335 CMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGYERQ-LHRQLLEPLAEYLGDHEIGRDYRLQTDERCKVAIY 413 (463)
T ss_dssp TTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCEECC-C-CTTTGGGGGGBC--CCCTTSBCCBCTTBCSEEE
T ss_pred eCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCCCCC-CccchhHHHHHHhCCcccCcccccccCCCCCCeEE
Confidence 8899999875432 5555 664 4899999999999944 225555443211 12399
Q ss_pred eecccch
Q 018550 300 VLGHCTS 306 (354)
Q Consensus 300 a~GD~~~ 306 (354)
++|||..
T Consensus 414 a~G~~~~ 420 (463)
T 3s5w_A 414 AQGFSQA 420 (463)
T ss_dssp ESSCCHH
T ss_pred EcCCCcc
Confidence 9999886
No 59
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.96 E-value=1.3e-30 Score=238.28 Aligned_cols=274 Identities=16% Similarity=0.170 Sum_probs=186.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCc--EEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHT--VVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMG 79 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~--v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (354)
+++|+|||||++|+++|..|+++|++ |+|||+++.++..... +.......
T Consensus 9 ~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~-------------------------l~~~~~~~--- 60 (415)
T 3lxd_A 9 RADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPP-------------------------LSKEYLAR--- 60 (415)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGG-------------------------GGTTTTTT---
T ss_pred CCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCccc-------------------------CCHHHHcC---
Confidence 36899999999999999999999987 9999997644211100 00000000
Q ss_pred ccCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEE
Q 018550 80 FQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVV 159 (354)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vI 159 (354)
... ...+..+..++..+.+++ ++.+++|+.++. ..+.+.+.++. .+.||+||
T Consensus 61 --~~~-----------------~~~~~~~~~~~~~~~~i~--~~~~~~v~~id~---~~~~v~~~~g~----~~~~d~lv 112 (415)
T 3lxd_A 61 --EKT-----------------FERICIRPAQFWEDKAVE--MKLGAEVVSLDP---AAHTVKLGDGS----AIEYGKLI 112 (415)
T ss_dssp --SSC-----------------SGGGBSSCHHHHHHTTEE--EEETCCEEEEET---TTTEEEETTSC----EEEEEEEE
T ss_pred --CCC-----------------HHHhccCCHHHHHHCCcE--EEeCCEEEEEEC---CCCEEEECCCC----EEEeeEEE
Confidence 000 011222224445567887 888889999976 34567777664 89999999
Q ss_pred EeeCCCCCcccCCCCCCCCCCcceeecccCCC-----CCCCC-CCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC--
Q 018550 160 VCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRI-----PNPFQ-DQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA-- 231 (354)
Q Consensus 160 lAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~-----~~~~~-~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~-- 231 (354)
+||| +.|+.|+++|.+.. .........+ ..... +++++|||+|.+|+|+|..+.+.|.+|+++++.+.
T Consensus 113 lAtG--~~~~~~~i~g~~~~--~v~~~~~~~d~~~l~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l 188 (415)
T 3lxd_A 113 WATG--GDPRRLSCVGADLA--GVHAVRTKEDADRLMAELDAGAKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVL 188 (415)
T ss_dssp ECCC--EECCCCBTTSSCCB--TEECCCSHHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT
T ss_pred EccC--CccCCCCCCCcccc--CEEEEcCHHHHHHHHHHhhhcCCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchh
Confidence 9999 88999988886531 1121111100 00113 79999999999999999999999999999999874
Q ss_pred ---------ccccccCCCCC-CeEEecceeEEecC-Cc---EEEccCcEEecCEEEEcccCCCccCcccccCchhhh---
Q 018550 232 ---------DETHEKQPGYD-NMWLHSMVERANED-GT---VVFRNGRVVSADVIMHCTGLTGTSTTTLFLKPMALL--- 294 (354)
Q Consensus 232 ---------~~~~~~l~~~~-~~~~~~~v~~v~~~-~~---v~~~~g~~~~~D~vi~a~G~~~~~p~~~~l~~~~~~--- 294 (354)
+...+.+++.+ +++.++.|+++..+ +. |++++|+++++|.||+|+|+. |++++++..+..
T Consensus 189 ~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~---p~~~l~~~~gl~~~~ 265 (415)
T 3lxd_A 189 ARVAGEALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIV---PCVGALISAGASGGN 265 (415)
T ss_dssp TTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCE---ESCHHHHHTTCCCSS
T ss_pred hhhcCHHHHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCc---cChHHHHhCCCCcCC
Confidence 11122234444 89999999999854 32 778899999999999999999 777776543322
Q ss_pred -----------hceeeeecccchh-----------------hHHHHHHHhhhccCCCcccccCCCCCccccC
Q 018550 295 -----------LWMTIVLGHCTST-----------------FFRQSWHQAFHLLGYHRRLSLSPSLNSRASG 338 (354)
Q Consensus 295 -----------~~~i~a~GD~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (354)
..+|||+|||+.. ...|+...|.++.|....+...|.+++..++
T Consensus 266 gi~vd~~~~t~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~p~~~~~~~~ 337 (415)
T 3lxd_A 266 GVDVDEFCRTSLTDVYAIGDCAAHANDFADGAVIRLESVQNANDMATAAAKDICGAPVPYKATPWFWSNQYD 337 (415)
T ss_dssp SEECCTTCBCSSTTEEECGGGEEEECGGGTTCEECCCSHHHHHHHHHHHHHHHTTCCCCCCCCCEEEEEETT
T ss_pred CEEECCCCCcCCCCEEEEEeeeeecCcccCCcceeechHHHHHHHHHHHHHHhcCCCCCCCCCCeeEeeeCC
Confidence 2459999999863 2355667788888766544444444444333
No 60
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.96 E-value=2.7e-30 Score=246.42 Aligned_cols=264 Identities=20% Similarity=0.302 Sum_probs=184.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHc--CCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLRE--GHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMG 79 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~--g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (354)
+++|+|||||++|+++|..|++. |.+|+|||+++.++ +... . .+..
T Consensus 36 ~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~--~~~~--------------------~-------lp~~--- 83 (588)
T 3ics_A 36 SRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYIS--FANC--------------------G-------LPYY--- 83 (588)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSS--BCGG--------------------G-------HHHH---
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcc--ccCC--------------------C-------Cchh---
Confidence 57999999999999999999998 89999999987553 1000 0 0000
Q ss_pred ccCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEE
Q 018550 80 FQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVV 159 (354)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vI 159 (354)
+.+... +....+..++.++.+++++. ++++++|++++..+ +.+.+...+ .+....+.||+||
T Consensus 84 ~~g~~~--------------~~~~~~~~~~~~~~~~~gi~--v~~~~~V~~id~~~-~~v~v~~~~-~g~~~~~~~d~lv 145 (588)
T 3ics_A 84 IGGVIT--------------ERQKLLVQTVERMSKRFNLD--IRVLSEVVKINKEE-KTITIKNVT-TNETYNEAYDVLI 145 (588)
T ss_dssp HTTSSC--------------CGGGGBSSCHHHHHHHTTCE--EECSEEEEEEETTT-TEEEEEETT-TCCEEEEECSEEE
T ss_pred hcCcCC--------------ChHHhhccCHHHHHHhcCcE--EEECCEEEEEECCC-CEEEEeecC-CCCEEEEeCCEEE
Confidence 000000 00122345667777788998 89999999998755 545444311 1223578999999
Q ss_pred EeeCCCCCcccCCCCCCCCCCcceeecccCCCCC-------CCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC-
Q 018550 160 VCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPN-------PFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA- 231 (354)
Q Consensus 160 lAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~-------~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~- 231 (354)
+||| +.|+.|+++|..... ..+......+.. ...+++++|||+|.+|+|+|..|++.|.+|+++.+.+.
T Consensus 146 iAtG--~~p~~p~i~G~~~~~-~v~~~~~~~~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 222 (588)
T 3ics_A 146 LSPG--AKPIVPSIPGIEEAK-ALFTLRNVPDTDRIKAYIDEKKPRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQV 222 (588)
T ss_dssp ECCC--EEECCCCCTTTTTCT-TEEECSSHHHHHHHHHHHHHHCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred ECCC--CCCCCCCCCCcccCC-CeEEeCCHHHHHHHHHHHhhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcc
Confidence 9999 899999999874322 223322211110 13579999999999999999999999999999998764
Q ss_pred ---------ccccccCCCCC-CeEEecceeEEecCC-cEEEccCcEEecCEEEEcccCCCccCcccccCchhhh------
Q 018550 232 ---------DETHEKQPGYD-NMWLHSMVERANEDG-TVVFRNGRVVSADVIMHCTGLTGTSTTTLFLKPMALL------ 294 (354)
Q Consensus 232 ---------~~~~~~l~~~~-~~~~~~~v~~v~~~~-~v~~~~g~~~~~D~vi~a~G~~~~~p~~~~l~~~~~~------ 294 (354)
+...+.+++.+ +++.++.|++++.++ .|++.+|+++++|.||+|+|+. |++++++..+..
T Consensus 223 l~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~~~g~~i~~D~Vi~a~G~~---p~~~~l~~~g~~~~~~g~ 299 (588)
T 3ics_A 223 MPPIDYEMAAYVHEHMKNHDVELVFEDGVDALEENGAVVRLKSGSVIQTDMLILAIGVQ---PESSLAKGAGLALGVRGT 299 (588)
T ss_dssp CTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEGGGTEEEETTSCEEECSEEEECSCEE---ECCHHHHHTTCCBCGGGC
T ss_pred cccCCHHHHHHHHHHHHHcCCEEEECCeEEEEecCCCEEEECCCCEEEcCEEEEccCCC---CChHHHHhcCceEcCCCC
Confidence 11222334444 889999999998643 3888999999999999999999 777666543322
Q ss_pred ----------hceeeeecccch----------------hhHHHHHHHhhhccC
Q 018550 295 ----------LWMTIVLGHCTS----------------TFFRQSWHQAFHLLG 321 (354)
Q Consensus 295 ----------~~~i~a~GD~~~----------------~~~~~~~~~~~~~~~ 321 (354)
..+|||+|||+. ....|+...+.++.+
T Consensus 300 i~vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 352 (588)
T 3ics_A 300 IKVNEKFQTSDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRMLADIIHG 352 (588)
T ss_dssp BCCCTTSBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTT
T ss_pred EEECCccccCCCCEEEeeeeeecccccCCcccccccHHHHHHHHHHHHHHhcC
Confidence 134999999983 135667777888876
No 61
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.96 E-value=8.6e-31 Score=243.81 Aligned_cols=276 Identities=15% Similarity=0.194 Sum_probs=180.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
++||+|||||++|+++|..|+++|.+|+|||++ .+||+|.+. +|.|.+.++.............
T Consensus 20 ~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~-~~GG~~~~~--------gc~p~k~l~~~~~~~~~~~~~~------- 83 (478)
T 3dk9_A 20 SYDYLVIGGGSGGLASARRAAELGARAAVVESH-KLGGTCVNV--------GCVPKKVMWNTAVHSEFMHDHA------- 83 (478)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHH--------SHHHHHHHHHHHHHHHHHTTTT-------
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCccccc--------CccchHHHHHHHHHHHHHHHHH-------
Confidence 379999999999999999999999999999975 899999874 6666654444332222111111
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHH-----------HHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCce
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRY-----------LQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVV 150 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~ 150 (354)
.+.+... ....++..+.++ +.......+++ +..+. +..++ . ..+.+.. ++
T Consensus 84 ~~g~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~--~~~g~-~~~~~--~-~~~~v~~-~g---- 144 (478)
T 3dk9_A 84 DYGFPSC--------EGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIE--IIRGH-AAFTS--D-PKPTIEV-SG---- 144 (478)
T ss_dssp TTTSCCC--------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEESC-EEECS--C-SSCEEEE-TT----
T ss_pred hcCccCC--------CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcE--EEEeE-EEEee--C-CeEEEEE-CC----
Confidence 1111110 111222333333 33334445666 55432 33322 1 4456653 32
Q ss_pred EEEEeCEEEEeeCCCCCcccC---CCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEE
Q 018550 151 EEETFDAVVVCNGHFSVPRLA---QVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIAS 227 (354)
Q Consensus 151 ~~~~~d~vIlAtG~~s~~~~p---~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~ 227 (354)
.++.||+||+||| +.|+.| +++|.+. ..++..+... ...+++++|||+|++|+|+|..|++.|.+|++++
T Consensus 145 ~~~~~d~lviAtG--~~p~~p~~~~i~G~~~----~~~~~~~~~~-~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~ 217 (478)
T 3dk9_A 145 KKYTAPHILIATG--GMPSTPHESQIPGASL----GITSDGFFQL-EELPGRSVIVGAGYIAVEMAGILSALGSKTSLMI 217 (478)
T ss_dssp EEEECSCEEECCC--EEECCCCTTTSTTGGG----SBCHHHHTTC-CSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEeeEEEEccC--CCCCCCCcCCCCCCce----eEchHHhhch-hhcCccEEEECCCHHHHHHHHHHHHcCCeEEEEE
Confidence 3799999999999 889888 8888652 1222222222 2246899999999999999999999999999999
Q ss_pred ecCC----------ccccccCCCCC-CeEEecceeEEecC--C-c--EEEcc---C----cEEecCEEEEcccCCCccCc
Q 018550 228 RSVA----------DETHEKQPGYD-NMWLHSMVERANED--G-T--VVFRN---G----RVVSADVIMHCTGLTGTSTT 284 (354)
Q Consensus 228 r~~~----------~~~~~~l~~~~-~~~~~~~v~~v~~~--~-~--v~~~~---g----~~~~~D~vi~a~G~~~~~p~ 284 (354)
+.+. +...+.+++.+ +++.++.|++++.+ + . +.+.+ | +++++|.||+|+|++ |+
T Consensus 218 ~~~~~l~~~d~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~---p~ 294 (478)
T 3dk9_A 218 RHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRV---PN 294 (478)
T ss_dssp SSSSSCTTSCHHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEE---ES
T ss_pred eCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccc---cC
Confidence 9764 11223344444 88888999998743 3 1 55554 2 578999999999999 66
Q ss_pred cccc--Cchhhh----------------hceeeeecccchh------hHHHHHHHhhhccCC
Q 018550 285 TLFL--KPMALL----------------LWMTIVLGHCTST------FFRQSWHQAFHLLGY 322 (354)
Q Consensus 285 ~~~l--~~~~~~----------------~~~i~a~GD~~~~------~~~~~~~~~~~~~~~ 322 (354)
+++| +..+.. ..+|||+|||+.. ...|+...+.++.+.
T Consensus 295 ~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 356 (478)
T 3dk9_A 295 TKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEY 356 (478)
T ss_dssp CTTSCGGGGTCCBCTTCCBCCCTTCBCSSTTEEECGGGGCSSCCHHHHHHHHHHHHHHHHSC
T ss_pred CCCCCchhcCCeeCCCCCEeeCCCcccCCCCEEEEEecCCCCccHhHHHHHHHHHHHHHcCC
Confidence 6632 222221 1349999999952 356677778888765
No 62
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=99.96 E-value=2.4e-30 Score=240.44 Aligned_cols=273 Identities=16% Similarity=0.157 Sum_probs=171.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHHc--CCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLRE--GHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMG 79 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~--g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (354)
+++|+|||||++|+++|..|++. |.+|+|||+++.++ +... ..+ . + ...
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~--~~~~-gl~--------~--------~------~~g---- 53 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRIS--YGGC-GIP--------Y--------Y------VSG---- 53 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---------------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccc--cccc-ccc--------h--------h------hcC----
Confidence 47999999999999999999999 89999999987653 1100 000 0 0 000
Q ss_pred ccCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEE
Q 018550 80 FQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVV 159 (354)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vI 159 (354)
.+. . ....++....+..+...+.++.+++ ++++++|++++... +.+.+.... .+....+.||+||
T Consensus 54 --~~~--~-------~~~~~~~~~~~~~~~~~~~~~~gi~--~~~~~~V~~id~~~-~~v~~~~~~-~g~~~~~~~d~lv 118 (472)
T 3iwa_A 54 --EVS--N-------IESLQATPYNVVRDPEFFRINKDVE--ALVETRAHAIDRAA-HTVEIENLR-TGERRTLKYDKLV 118 (472)
T ss_dssp --------------------------------------CE--EECSEEEEEEETTT-TEEEEEETT-TCCEEEEECSEEE
T ss_pred --CCC--c-------hHHhccccchhccCHHHHhhhcCcE--EEECCEEEEEECCC-CEEEEeecC-CCCEEEEECCEEE
Confidence 000 0 0000011122455566666667888 88999999998755 444444311 1223578999999
Q ss_pred EeeCCCCCcccCCCCCCCCCCcceeecccCCC-------CCCCCCCeEEEEccCCCHHHHHHHHhcc-CCEEEEEEecCC
Q 018550 160 VCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRI-------PNPFQDQVVILIGHYASGLDIKRDLAGF-AKEVHIASRSVA 231 (354)
Q Consensus 160 lAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~-------~~~~~~~~v~ViG~G~~g~e~a~~l~~~-g~~v~~~~r~~~ 231 (354)
+||| +.|+.|+++|.+.. ...+.....+ .....+++++|||+|.+|+|+|..|++. |.+|+++.+.+.
T Consensus 119 iAtG--~~p~~p~i~G~~~~--~v~~~~~~~~~~~l~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~ 194 (472)
T 3iwa_A 119 LALG--SKANRPPVEGMDLA--GVTPVTNLDEAEFVQHAISAGEVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQ 194 (472)
T ss_dssp ECCC--EEECCCSCTTTTSB--TEEECCSHHHHHHHHHHCCTTSCSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSS
T ss_pred EeCC--CCcCCCCCCCCCCC--CEEEeCCHHHHHHHHHHhhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCc
Confidence 9999 88999999887631 2222211110 0113478999999999999999999999 999999998764
Q ss_pred --c---------cccccCCCCC-CeEEecceeEEec-CCc--EEEccCcEEecCEEEEcccCCCccCcccccCchhhh--
Q 018550 232 --D---------ETHEKQPGYD-NMWLHSMVERANE-DGT--VVFRNGRVVSADVIMHCTGLTGTSTTTLFLKPMALL-- 294 (354)
Q Consensus 232 --~---------~~~~~l~~~~-~~~~~~~v~~v~~-~~~--v~~~~g~~~~~D~vi~a~G~~~~~p~~~~l~~~~~~-- 294 (354)
. ...+.+++.+ +++.++.|+++.. ++. +++.+|+++++|.||+|+|+. |+++++...+..
T Consensus 195 ~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~---p~~~l~~~~gl~~~ 271 (472)
T 3iwa_A 195 IMPGFTSKSLSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGVS---PNTQLARDAGLELD 271 (472)
T ss_dssp SSTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEESSCEEECSEEEECSCEE---ECCHHHHHHTCCBC
T ss_pred ccccccCHHHHHHHHHHHHhcCCEEEeCCEEEEEEccCCeEEEEEeCCCEEEcCEEEECCCCC---cCHHHHHhCCccCC
Confidence 1 1122334444 8899999999986 444 667888999999999999999 777665433322
Q ss_pred --------------hceeeeecccch----------------hhHHHHHHHhhhccCCCcc
Q 018550 295 --------------LWMTIVLGHCTS----------------TFFRQSWHQAFHLLGYHRR 325 (354)
Q Consensus 295 --------------~~~i~a~GD~~~----------------~~~~~~~~~~~~~~~~~~~ 325 (354)
..+|||+|||+. ....|+...+.++.|....
T Consensus 272 ~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~ 332 (472)
T 3iwa_A 272 PRGAIIVDTRMRTSDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLADGDAT 332 (472)
T ss_dssp TTCCEECCTTCBCSSTTEEECGGGEEEEBTTTSSEECCCCTTHHHHHHHHHHHHHTTCCCC
T ss_pred CCCCEEECCCcccCCCCEEEeccceecccccCCceeecchHHHHHHHHHHHHHHhcCCCcc
Confidence 134999999982 2456778888888776543
No 63
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.96 E-value=1.1e-30 Score=241.59 Aligned_cols=278 Identities=17% Similarity=0.215 Sum_probs=182.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCccccc-ccccchhccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSS-LYKSLRVNLPRELMGF 80 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 80 (354)
++||+|||||++|+++|..|++.|.+|+|||+ +.+||+|.+. +|.|.+.++... .+..+........++
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~~~--------g~~Psk~l~~~~~~~~~~~~~~~~~~~g- 74 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCLNI--------GCIPSKALIHVAEQFHQASRFTEPSPLG- 74 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHHHH--------SHHHHHHHHHHHHHHHHHHHTTSCCTTC-
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCCCc--------CcHhHHHHHHHHHHHHHHhhcccccccC-
Confidence 47899999999999999999999999999999 6899999873 666655443322 222222110000011
Q ss_pred cCCCCCccCCCCCCCCCCCCCHHHHHHH-----------HHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCc
Q 018550 81 QAYPFVARNYEGSVDLRRYPGHEEVLRY-----------LQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDV 149 (354)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~ 149 (354)
++.. ....++..+..+ +.+.+++.+++ ++.++.+. + +. +++.+.+
T Consensus 75 --~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~--~~~g~~~~-~--~~---~~v~v~~---- 130 (458)
T 1lvl_A 75 --ISVA----------SPRLDIGQSVAWKDGIVDRLTTGVAALLKKHGVK--VVHGWAKV-L--DG---KQVEVDG---- 130 (458)
T ss_dssp --CCCC----------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EECSCEEE-E--ET---TEEEETT----
T ss_pred --cccC----------CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcE--EEEEEEEE-c--cC---CEEEEee----
Confidence 1110 011122444333 33455667887 77766543 3 22 3455543
Q ss_pred eEEEEeCEEEEeeCCCCCcccCC-CCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEe
Q 018550 150 VEEETFDAVVVCNGHFSVPRLAQ-VPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASR 228 (354)
Q Consensus 150 ~~~~~~d~vIlAtG~~s~~~~p~-~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r 228 (354)
.++.||+||+||| +.|+.|+ ++ .+ ...+++.+..... ..+++++|||+|++|+|+|..|++.|.+|+++++
T Consensus 131 -~~~~~d~lviATG--s~p~~~~~~~-~~---~~v~~~~~~~~~~-~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~ 202 (458)
T 1lvl_A 131 -QRIQCEHLLLATG--SSSVELPMLP-LG---GPVISSTEALAPK-ALPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEA 202 (458)
T ss_dssp -EEEECSEEEECCC--EEECCBTTBC-CB---TTEECHHHHTCCS-SCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECS
T ss_pred -EEEEeCEEEEeCC--CCCCCCCCCC-cc---CcEecHHHHhhhh-ccCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEc
Confidence 3799999999999 7787665 44 22 1344444433322 2578999999999999999999999999999999
Q ss_pred cCC----------ccccccCCCCC-CeEEecceeEEecCCcEEEc--cC--cEEecCEEEEcccCCCccCccccc--Cch
Q 018550 229 SVA----------DETHEKQPGYD-NMWLHSMVERANEDGTVVFR--NG--RVVSADVIMHCTGLTGTSTTTLFL--KPM 291 (354)
Q Consensus 229 ~~~----------~~~~~~l~~~~-~~~~~~~v~~v~~~~~v~~~--~g--~~~~~D~vi~a~G~~~~~p~~~~l--~~~ 291 (354)
.+. +...+.+++.+ +++.++.|+++.. +.+.+. +| +++++|.|++|+|++ |+++++ +..
T Consensus 203 ~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~-~~v~v~~~~G~~~~i~~D~vv~a~G~~---p~~~~l~~~~~ 278 (458)
T 1lvl_A 203 RERILPTYDSELTAPVAESLKKLGIALHLGHSVEGYEN-GCLLANDGKGGQLRLEADRVLVAVGRR---PRTKGFNLECL 278 (458)
T ss_dssp SSSSSTTSCHHHHHHHHHHHHHHTCEEETTCEEEEEET-TEEEEECSSSCCCEECCSCEEECCCEE---ECCSSSSGGGS
T ss_pred CCccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEEe-CCEEEEECCCceEEEECCEEEECcCCC---cCCCCCCcHhc
Confidence 864 11122233444 8888999999987 435544 56 689999999999999 665542 222
Q ss_pred hh---------------hhceeeeecccchh------hHHHHHHHhhhccCCCcc
Q 018550 292 AL---------------LLWMTIVLGHCTST------FFRQSWHQAFHLLGYHRR 325 (354)
Q Consensus 292 ~~---------------~~~~i~a~GD~~~~------~~~~~~~~~~~~~~~~~~ 325 (354)
+. ...+|||+|||+.. ...|+...+.++.+....
T Consensus 279 g~~~~~~~i~vd~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~~~~ 333 (458)
T 1lvl_A 279 DLKMNGAAIAIDERCQTSMHNVWAIGDVAGEPMLAHRAMAQGEMVAEIIAGKARR 333 (458)
T ss_dssp CCCEETTEECCCTTCBCSSTTEEECGGGGCSSCCHHHHHHHHHHHHHHHTTCCCC
T ss_pred CCcccCCEEeECCCCcCCCCCEEEeeccCCCcccHHHHHHHHHHHHHHhcCCCcc
Confidence 11 12459999999873 356777788888764433
No 64
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.96 E-value=1.8e-30 Score=243.40 Aligned_cols=284 Identities=17% Similarity=0.196 Sum_probs=181.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC--------CccceeecCCCCCCCCCCCCCCCCcccccccccchhcc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE--------QVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNL 73 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~--------~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (354)
.+||+|||||++|+++|..|++.|.+|+|||+.+ .+||+|.+. +|.|.+.+.....+.......
T Consensus 32 ~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~--------GciPsk~l~~~~~~~~~~~~~ 103 (519)
T 3qfa_A 32 DYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNV--------GCIPKKLMHQAALLGQALQDS 103 (519)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHH--------SHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCc--------CccchHHHHHHHHHHHHHHHH
Confidence 3699999999999999999999999999999854 789999874 777776554443322222111
Q ss_pred ccccccccCCCCCccCCCCCCCCCCCCCHHHHHHHHHH-----------HHHHhCCcceEEeceEEEEEEEeCCCcEEEE
Q 018550 74 PRELMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQN-----------FAREFGVDQVVRLHTEVLNARLVESNKWKVK 142 (354)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----------~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~ 142 (354)
. .+.+... .....++..+.++.+. ..+..+++ +.. .++..++. ..+.+.
T Consensus 104 ~-------~~g~~~~-------~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~--~i~-g~a~~~d~---~~v~v~ 163 (519)
T 3qfa_A 104 R-------NYGWKVE-------ETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVV--YEN-AYGQFIGP---HRIKAT 163 (519)
T ss_dssp H-------HTTBCCC-------SSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEC-SEEEEEET---TEEEEE
T ss_pred H-------hcCcccC-------CcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEE-EEEEEeeC---CEEEEE
Confidence 1 1111100 0112233444444433 23334665 443 44444432 445554
Q ss_pred EeecCCceEEEEeCEEEEeeCCCCCcccCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCCE
Q 018550 143 SRKKDDVVEEETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKE 222 (354)
Q Consensus 143 ~~~g~~~~~~~~~d~vIlAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~ 222 (354)
..++. ..++.||+||+||| +.|+.|+++|... ..+++...... ...+++++|||+|++|+|+|..|++.|.+
T Consensus 164 ~~~g~--~~~i~~d~lViATG--s~p~~p~i~G~~~---~~~t~~~~~~l-~~~~~~vvVIGgG~ig~E~A~~l~~~G~~ 235 (519)
T 3qfa_A 164 NNKGK--EKIYSAERFLIATG--ERPRYLGIPGDKE---YCISSDDLFSL-PYCPGKTLVVGASYVALECAGFLAGIGLD 235 (519)
T ss_dssp CTTCC--CCEEEEEEEEECCC--EEECCCCCTTHHH---HCBCHHHHTTC-SSCCCSEEEECCSHHHHHHHHHHHHTTCC
T ss_pred cCCCC--EEEEECCEEEEECC--CCcCCCCCCCccC---ceEcHHHHhhh-hhcCCeEEEECCcHHHHHHHHHHHHcCCe
Confidence 43332 34899999999999 8999999988654 22333222222 23467899999999999999999999999
Q ss_pred EEEEEecCC---------ccccccCCCCC-CeEEecceeEEec--C---Cc--EEE--ccC-c--EEecCEEEEcccCCC
Q 018550 223 VHIASRSVA---------DETHEKQPGYD-NMWLHSMVERANE--D---GT--VVF--RNG-R--VVSADVIMHCTGLTG 280 (354)
Q Consensus 223 v~~~~r~~~---------~~~~~~l~~~~-~~~~~~~v~~v~~--~---~~--v~~--~~g-~--~~~~D~vi~a~G~~~ 280 (354)
|+++.++.. +...+.+++.+ +++.++.++++.. + +. +.+ .++ + ++++|.|++|+|++
T Consensus 236 Vtlv~~~~~l~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~- 314 (519)
T 3qfa_A 236 VTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRD- 314 (519)
T ss_dssp EEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEE-
T ss_pred EEEEecccccccCCHHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCc-
Confidence 999998532 11223344444 7888877766652 1 22 322 345 2 56899999999999
Q ss_pred ccCccccc--Cchhhh-----------------hceeeeecccc-h------hhHHHHHHHhhhccCCCc
Q 018550 281 TSTTTLFL--KPMALL-----------------LWMTIVLGHCT-S------TFFRQSWHQAFHLLGYHR 324 (354)
Q Consensus 281 ~~p~~~~l--~~~~~~-----------------~~~i~a~GD~~-~------~~~~~~~~~~~~~~~~~~ 324 (354)
||++++ ...+.. ..+|||+|||+ . ....|+...+.++.+...
T Consensus 315 --p~~~~l~l~~~gl~~~~~~G~I~Vd~~~~Ts~~~IyA~GD~~~g~~~~~~~A~~~g~~aa~~i~g~~~ 382 (519)
T 3qfa_A 315 --ACTRKIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAGST 382 (519)
T ss_dssp --ESCSSSCSTTTTCCCCTTTCCBCCCTTSBCSSTTEEECGGGBSSSCCCHHHHHHHHHHHHHHHHSCCC
T ss_pred --ccCCCCChhhcCcEEcCCCCeEeeCCCCccCCCCEEEEEeccCCCCccHHHHHHHHHHHHHHHcCCCC
Confidence 766652 222211 13499999998 3 235667777888876543
No 65
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.96 E-value=4e-31 Score=243.90 Aligned_cols=275 Identities=15% Similarity=0.206 Sum_probs=181.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchh-ccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRV-NLPRELMGF 80 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 80 (354)
++||+|||||++|+++|..|++.|.+|+|||++ .+||+|.+. +|.|.+.++....+..... +.+...+..
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~--------gciP~k~l~~~a~~~~~~~~~~~~~g~~~ 74 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCALIEAK-ELGGTCVNV--------GCVPKKVMWHAAQIREAIHMYGPDYGFDT 74 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHHHHH--------SHHHHHHHHHHHHHHHHHHTTGGGGTEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC-CCCCccccc--------CccChHHHHHHHHHHHHHHHHHHhcCccC
Confidence 479999999999999999999999999999997 789999873 6776655443322211111 111100000
Q ss_pred cCCCCCccCCCCCCCCCCCCCHHHHH-----------HHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCc
Q 018550 81 QAYPFVARNYEGSVDLRRYPGHEEVL-----------RYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDV 149 (354)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~ 149 (354)
... ..++..+. ..+...+.+.+++ +..+. +..++ . +++.+ ++
T Consensus 75 ~~~---------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~--~~~g~-~~~i~--~---~~v~~-~g--- 127 (450)
T 1ges_A 75 TIN---------------KFNWETLIASRTAYIDRIHTSYENVLGKNNVD--VIKGF-ARFVD--A---KTLEV-NG--- 127 (450)
T ss_dssp EEE---------------EECHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEESC-CEEEE--T---TEEEE-TT---
T ss_pred CCC---------------ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEeE-EEEec--C---CEEEE-CC---
Confidence 000 00112222 2233334556777 66643 34443 2 24544 33
Q ss_pred eEEEEeCEEEEeeCCCCCcccCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEec
Q 018550 150 VEEETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRS 229 (354)
Q Consensus 150 ~~~~~~d~vIlAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~ 229 (354)
.++.||+||+||| +.|+.|+++|.+. ..++..+... ...+++++|||+|.+|+|+|..|++.|.+|+++++.
T Consensus 128 -~~~~~d~lviAtG--s~p~~p~i~g~~~----~~~~~~~~~~-~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~ 199 (450)
T 1ges_A 128 -ETITADHILIATG--GRPSHPDIPGVEY----GIDSDGFFAL-PALPERVAVVGAGYIGVELGGVINGLGAKTHLFEMF 199 (450)
T ss_dssp -EEEEEEEEEECCC--EEECCCCSTTGGG----SBCHHHHHHC-SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred -EEEEeCEEEECCC--CCCCCCCCCCccc----eecHHHhhhh-hhcCCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeC
Confidence 3799999999999 8899998888642 1222222111 124689999999999999999999999999999987
Q ss_pred CC----------ccccccCCCCC-CeEEecceeEEecC--C--cEEEccCcEEecCEEEEcccCCCccCccccc--Cchh
Q 018550 230 VA----------DETHEKQPGYD-NMWLHSMVERANED--G--TVVFRNGRVVSADVIMHCTGLTGTSTTTLFL--KPMA 292 (354)
Q Consensus 230 ~~----------~~~~~~l~~~~-~~~~~~~v~~v~~~--~--~v~~~~g~~~~~D~vi~a~G~~~~~p~~~~l--~~~~ 292 (354)
+. +...+.+++.+ +++.++.|+++..+ + .|++++|+++++|.||+|+|++ |++++| +..+
T Consensus 200 ~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~---p~~~~l~~~~~g 276 (450)
T 1ges_A 200 DAPLPSFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGRE---PANDNINLEAAG 276 (450)
T ss_dssp SSSSTTSCHHHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEE---ESCTTSCHHHHT
T ss_pred CchhhhhhHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCC---cCCCCCCchhcC
Confidence 64 11122333444 88999999999854 2 2777888899999999999999 666632 2211
Q ss_pred hh----------------hceeeeecccchh------hHHHHHHHhhhccCCC
Q 018550 293 LL----------------LWMTIVLGHCTST------FFRQSWHQAFHLLGYH 323 (354)
Q Consensus 293 ~~----------------~~~i~a~GD~~~~------~~~~~~~~~~~~~~~~ 323 (354)
.. ..+|||+|||... ...|+...+.++.+..
T Consensus 277 l~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~~ 329 (450)
T 1ges_A 277 VKTNEKGYIVVDKYQNTNIEGIYAVGDNTGAVELTPVAVAAGRRLSERLFNNK 329 (450)
T ss_dssp CCBCTTSCBCCCTTSBCSSTTEEECSGGGTSCCCHHHHHHHHHHHHHHHHTTC
T ss_pred ceECCCCCEeECCCCccCCCCEEEEeccCCCCccHHHHHHHHHHHHHHHcCCC
Confidence 11 2349999999862 3567777788887643
No 66
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.96 E-value=2.9e-31 Score=238.23 Aligned_cols=251 Identities=20% Similarity=0.274 Sum_probs=173.0
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhccccccccccC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (354)
.+|+|||||+||+++|..|++.| +|+|||+++.++ +.. .. +...+. + .
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~--~~~---------------~~----l~~~~~--------g--~ 56 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPY--YSK---------------PM----LSHYIA--------G--F 56 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCC--CCS---------------TT----HHHHHT--------T--S
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCc--ccc---------------ch----hHHHHh--------C--C
Confidence 58999999999999999999999 999999975431 000 00 000000 0 0
Q ss_pred CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEee
Q 018550 83 YPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCN 162 (354)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlAt 162 (354)
..+ .++..+..+++++.+++ ++.+++|+.++. ..+.|+ .++. ++.||+||+||
T Consensus 57 ~~~-----------------~~~~~~~~~~~~~~~v~--~~~g~~v~~id~---~~~~V~-~~g~----~~~~d~lViAT 109 (367)
T 1xhc_A 57 IPR-----------------NRLFPYSLDWYRKRGIE--IRLAEEAKLIDR---GRKVVI-TEKG----EVPYDTLVLAT 109 (367)
T ss_dssp SCG-----------------GGGCSSCHHHHHHHTEE--EECSCCEEEEET---TTTEEE-ESSC----EEECSEEEECC
T ss_pred CCH-----------------HHhccCCHHHHHhCCcE--EEECCEEEEEEC---CCCEEE-ECCc----EEECCEEEECC
Confidence 000 11111223344567887 888888998875 345666 4443 79999999999
Q ss_pred CCCCCcccCCCCCCCCCCcceeecccCCCCCCC-----CCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCCc-----
Q 018550 163 GHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPF-----QDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVAD----- 232 (354)
Q Consensus 163 G~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~~-----~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~~----- 232 (354)
| +.|+.|+++|.+ ..++.....+.... .+++++|||+|++|+|+|..|++.|.+|+++++.+..
T Consensus 110 G--s~p~~p~i~G~~----~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~ 183 (367)
T 1xhc_A 110 G--ARAREPQIKGKE----YLLTLRTIFDADRIKESIENSGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLGLDE 183 (367)
T ss_dssp C--EEECCCCSBTGG----GEECCCSHHHHHHHHHHHHHHSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTTCCH
T ss_pred C--CCCCCCCCCCcC----CEEEEcCHHHHHHHHHHhhcCCcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeeccCCH
Confidence 9 899999888822 22322221111101 3589999999999999999999999999999987641
Q ss_pred ----cccccCCCCC-CeEEecceeEEecCCcEEEccCcEEecCEEEEcccCCCccCcccccCchhhh-------------
Q 018550 233 ----ETHEKQPGYD-NMWLHSMVERANEDGTVVFRNGRVVSADVIMHCTGLTGTSTTTLFLKPMALL------------- 294 (354)
Q Consensus 233 ----~~~~~l~~~~-~~~~~~~v~~v~~~~~v~~~~g~~~~~D~vi~a~G~~~~~p~~~~l~~~~~~------------- 294 (354)
...+.+++.+ +++.++.|++++.++ |++++|+ +++|.|++|+|++ ||+++++..+..
T Consensus 184 ~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~-v~~~~g~-i~~D~vi~a~G~~---p~~~ll~~~gl~~~~gi~Vd~~~~t 258 (367)
T 1xhc_A 184 ELSNMIKDMLEETGVKFFLNSELLEANEEG-VLTNSGF-IEGKVKICAIGIV---PNVDLARRSGIHTGRGILIDDNFRT 258 (367)
T ss_dssp HHHHHHHHHHHHTTEEEECSCCEEEECSSE-EEETTEE-EECSCEEEECCEE---ECCHHHHHTTCCBSSSEECCTTSBC
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEEeeE-EEECCCE-EEcCEEEECcCCC---cCHHHHHhCCCCCCCCEEECCCccc
Confidence 1122334455 889999999998544 8888887 9999999999999 777766543321
Q ss_pred -hceeeeecccch----------hhHHHHHHHhhhccCCC
Q 018550 295 -LWMTIVLGHCTS----------TFFRQSWHQAFHLLGYH 323 (354)
Q Consensus 295 -~~~i~a~GD~~~----------~~~~~~~~~~~~~~~~~ 323 (354)
..+|||+|||+. ....|+...+.++.+..
T Consensus 259 ~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~~ 298 (367)
T 1xhc_A 259 SAKDVYAIGDCAEYSGIIAGTAKAAMEQARVLADILKGEP 298 (367)
T ss_dssp SSTTEEECGGGEEBTTBCCCSHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCEEEeEeeeecCCCCccHHHHHHHHHHHHHHHhcCCC
Confidence 245999999963 23456777788887644
No 67
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.96 E-value=4.2e-30 Score=239.57 Aligned_cols=263 Identities=14% Similarity=0.168 Sum_probs=176.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcC---CcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREG---HTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELM 78 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g---~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (354)
+++|+|||||++|+++|..|++.| .+|+|||+++.++..... ... ...
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~----------------------~~~---~~~---- 85 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAG----------------------MAL---WIG---- 85 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGG----------------------HHH---HHT----
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccc----------------------cch---hhc----
Confidence 479999999999999999999988 999999997654311100 000 000
Q ss_pred cccCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEE
Q 018550 79 GFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAV 158 (354)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~v 158 (354)
. ..... .++.....+.+.+.+++ ++.+++|..++.++ +.+.+.. ++ ...++.||+|
T Consensus 86 ---~-~~~~~--------------~~~~~~~~~~~~~~gv~--v~~~~~v~~i~~~~-~~v~v~~-~g--~~~~~~~d~l 141 (490)
T 2bc0_A 86 ---E-QIAGP--------------EGLFYSDKEELESLGAK--VYMESPVQSIDYDA-KTVTALV-DG--KNHVETYDKL 141 (490)
T ss_dssp ---T-SSSCS--------------GGGBSCCHHHHHHTTCE--EETTCCEEEEETTT-TEEEEEE-TT--EEEEEECSEE
T ss_pred ---C-ccCCH--------------HHhhhcCHHHHHhCCCE--EEeCCEEEEEECCC-CEEEEEe-CC--cEEEEECCEE
Confidence 0 00000 00001112334567887 88899999998654 5444431 22 1247999999
Q ss_pred EEeeCCCCCcccCCCCCCC------CCC---cceeecccCCC-------CCCCCCCeEEEEccCCCHHHHHHHHhccCCE
Q 018550 159 VVCNGHFSVPRLAQVPGID------SWP---GKQMHSHNYRI-------PNPFQDQVVILIGHYASGLDIKRDLAGFAKE 222 (354)
Q Consensus 159 IlAtG~~s~~~~p~~~g~~------~~~---~~~~~~~~~~~-------~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~ 222 (354)
|+||| +.|+.|+++|.+ .|. ..+++...+.+ .....+++++|||+|++|+|+|..|++.|.+
T Consensus 142 viAtG--~~p~~p~i~G~~~~~~~~~f~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g~~ 219 (490)
T 2bc0_A 142 IFATG--SQPILPPIKGAEIKEGSLEFEATLENLQFVKLYQNSADVIAKLENKDIKRVAVVGAGYIGVELAEAFQRKGKE 219 (490)
T ss_dssp EECCC--EEECCCSCBTCCBCTTCTTCCBSSTTEEECSSHHHHHHHHHHTTSTTCCEEEEECCSHHHHHHHHHHHHTTCE
T ss_pred EECCC--CCcCCCCCCCccccccccccccccCCEEEeCCHHHHHHHHHHhhhcCCceEEEECCCHHHHHHHHHHHHCCCe
Confidence 99999 889999888876 221 12333221111 0114679999999999999999999999999
Q ss_pred EEEEEecCC--c---------cccccCCCCC-CeEEecceeEEecCCc---EEEccCcEEecCEEEEcccCCCccCcccc
Q 018550 223 VHIASRSVA--D---------ETHEKQPGYD-NMWLHSMVERANEDGT---VVFRNGRVVSADVIMHCTGLTGTSTTTLF 287 (354)
Q Consensus 223 v~~~~r~~~--~---------~~~~~l~~~~-~~~~~~~v~~v~~~~~---v~~~~g~~~~~D~vi~a~G~~~~~p~~~~ 287 (354)
|+++++.+. . ...+.+++.+ +++.++.|+++..++. +.+ +|+++++|.||+|+|++ |++++
T Consensus 220 Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~v~~v~~-~g~~i~~D~Vi~a~G~~---p~~~l 295 (490)
T 2bc0_A 220 VVLIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQLAFGETVKEVAGNGKVEKIIT-DKNEYDVDMVILAVGFR---PNTTL 295 (490)
T ss_dssp EEEEESSSSTTTTTSCHHHHHHHHHHHHTTTCEEEETCCEEEEECSSSCCEEEE-SSCEEECSEEEECCCEE---ECCGG
T ss_pred EEEEEcccchhhhHHHHHHHHHHHHHHHhCCeEEEeCCEEEEEEcCCcEEEEEE-CCcEEECCEEEECCCCC---cChHH
Confidence 999999764 1 1222334455 8999999999986553 443 77899999999999999 77776
Q ss_pred cCchhh---------------hhceeeeecccchh----------------hHHHHHHHhhhccCCC
Q 018550 288 LKPMAL---------------LLWMTIVLGHCTST----------------FFRQSWHQAFHLLGYH 323 (354)
Q Consensus 288 l~~~~~---------------~~~~i~a~GD~~~~----------------~~~~~~~~~~~~~~~~ 323 (354)
++.... ...+|||+|||+.. ...|+...+.++.+..
T Consensus 296 l~~~l~~~~~G~I~Vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 362 (490)
T 2bc0_A 296 GNGKIDLFRNGAFLVNKRQETSIPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNACGTD 362 (490)
T ss_dssp GTTCSCBCTTSCBCCCTTCBCSSTTEEECGGGBCEEETTTTEEECCCCHHHHHHHHHHHHHHHTTCC
T ss_pred HHhhhccCCCCCEEECCCcccCCCCEEEeeeeEEeccccCCceeecccHHHHHHHHHHHHHHhcCCC
Confidence 654311 11349999999862 3566777788887643
No 68
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.96 E-value=3.1e-30 Score=245.16 Aligned_cols=267 Identities=18% Similarity=0.254 Sum_probs=183.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHHc--CCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLRE--GHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMG 79 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~--g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (354)
+++|+|||||+||+++|..|++. +.+|+|||+++.++..... +...
T Consensus 1 M~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~~-------------------------l~~~------- 48 (565)
T 3ntd_A 1 MKKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCG-------------------------LPYH------- 48 (565)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGG-------------------------HHHH-------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccccC-------------------------chHH-------
Confidence 37899999999999999999998 7899999998765311000 0000
Q ss_pred ccCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEE
Q 018550 80 FQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVV 159 (354)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vI 159 (354)
+.+... +....+.++...+.++++++ ++++++|++++... +.+.+.... .+...++.||+||
T Consensus 49 ~~~~~~--------------~~~~~~~~~~~~~~~~~~i~--~~~~~~V~~id~~~-~~v~~~~~~-~g~~~~~~~d~lv 110 (565)
T 3ntd_A 49 ISGEIA--------------QRSALVLQTPESFKARFNVE--VRVKHEVVAIDRAA-KLVTVRRLL-DGSEYQESYDTLL 110 (565)
T ss_dssp HTSSSC--------------CGGGGBCCCHHHHHHHHCCE--EETTEEEEEEETTT-TEEEEEETT-TCCEEEEECSEEE
T ss_pred hcCCcC--------------ChHHhhccCHHHHHHhcCcE--EEECCEEEEEECCC-CEEEEEecC-CCCeEEEECCEEE
Confidence 000000 00122334556666778888 88999999998755 444444311 1223578999999
Q ss_pred EeeCCCCCcccCCCCCCCCCCcceeecccCCCC-------CCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC-
Q 018550 160 VCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIP-------NPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA- 231 (354)
Q Consensus 160 lAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~-------~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~- 231 (354)
+||| +.|+.|+++|.+.. .........+. ....+++++|||+|.+|+|+|..|++.|.+|+++++.+.
T Consensus 111 iAtG--~~p~~p~ipG~~~~--~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 186 (565)
T 3ntd_A 111 LSPG--AAPIVPPIPGVDNP--LTHSLRNIPDMDRILQTIQMNNVEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQV 186 (565)
T ss_dssp ECCC--EEECCCCCTTCCST--TEECCSSHHHHHHHHHHHHHTTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred ECCC--CCCCCCCCCCCCCC--CEEEeCCHHHHHHHHHHHhhCCCCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCcc
Confidence 9999 78999999987642 22222111100 113578999999999999999999999999999999874
Q ss_pred ---------ccccccCCCCC-CeEEecceeEEec--------------------CCc--EEEccCcEEecCEEEEcccCC
Q 018550 232 ---------DETHEKQPGYD-NMWLHSMVERANE--------------------DGT--VVFRNGRVVSADVIMHCTGLT 279 (354)
Q Consensus 232 ---------~~~~~~l~~~~-~~~~~~~v~~v~~--------------------~~~--v~~~~g~~~~~D~vi~a~G~~ 279 (354)
....+.+.+.+ +++.++.|+++.. ++. +++.+|+++++|.||+|+|+.
T Consensus 187 l~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~ 266 (565)
T 3ntd_A 187 MTPVDREMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVR 266 (565)
T ss_dssp CTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEE
T ss_pred chhcCHHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCCc
Confidence 11122334444 8899999999875 232 667788899999999999999
Q ss_pred CccCcccccCchhhh----------------hceeeeecccch----------------hhHHHHHHHhhhccCCCcc
Q 018550 280 GTSTTTLFLKPMALL----------------LWMTIVLGHCTS----------------TFFRQSWHQAFHLLGYHRR 325 (354)
Q Consensus 280 ~~~p~~~~l~~~~~~----------------~~~i~a~GD~~~----------------~~~~~~~~~~~~~~~~~~~ 325 (354)
|++++++..+.. ..+|||+|||+. ....|+...|.++.+....
T Consensus 267 ---p~~~l~~~~g~~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~ 341 (565)
T 3ntd_A 267 ---PETQLARDAGLAIGELGGIKVNAMMQTSDPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGRMAADNMFGREER 341 (565)
T ss_dssp ---ECCHHHHHHTCCBCTTSSBCCCTTCBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTTCCCC
T ss_pred ---cchHHHHhCCcccCCCCCEEECCCcccCCCCEEEeeeeEeeccccCCceeecccHHHHHHHHHHHHHHhcCCCcc
Confidence 777665443322 134999999972 2356777788888776544
No 69
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.96 E-value=1.9e-30 Score=236.42 Aligned_cols=273 Identities=15% Similarity=0.146 Sum_probs=184.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCC--cEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGH--TVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMG 79 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~--~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (354)
+++|+|||||++|+++|..|++.|+ +|+|||+++.++..... +.... ..
T Consensus 1 ~k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~-------------------------l~~~~----l~ 51 (404)
T 3fg2_P 1 NDTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPP-------------------------LSKAY----LK 51 (404)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGG-------------------------GGTGG----GG
T ss_pred CCCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCcc-------------------------CCHHH----HC
Confidence 4789999999999999999999998 89999997643211000 00000 00
Q ss_pred ccCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEE
Q 018550 80 FQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVV 159 (354)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vI 159 (354)
. .... ..+.....+...+.+++ +.. ++|+.++.. ...+++.++. ++.||+||
T Consensus 52 ~-~~~~-----------------~~~~~~~~~~~~~~~i~--~~~-~~v~~id~~---~~~v~~~~g~----~~~~d~lv 103 (404)
T 3fg2_P 52 S-GGDP-----------------NSLMFRPEKFFQDQAIE--LIS-DRMVSIDRE---GRKLLLASGT----AIEYGHLV 103 (404)
T ss_dssp S-CCCT-----------------TSSBSSCHHHHHHTTEE--EEC-CCEEEEETT---TTEEEESSSC----EEECSEEE
T ss_pred C-CCCH-----------------HHccCCCHHHHHhCCCE--EEE-EEEEEEECC---CCEEEECCCC----EEECCEEE
Confidence 0 0000 11111123344566777 777 889998764 3467777764 89999999
Q ss_pred EeeCCCCCcccCCCCCCCCCCcceeecccC-----CCCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC---
Q 018550 160 VCNGHFSVPRLAQVPGIDSWPGKQMHSHNY-----RIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA--- 231 (354)
Q Consensus 160 lAtG~~s~~~~p~~~g~~~~~~~~~~~~~~-----~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~--- 231 (354)
+||| +.|+.|+++|.+.. ..+..... .......+++++|||+|.+|+|+|..+.+.|.+|+++.+.+.
T Consensus 104 lAtG--~~p~~~~i~g~~~~--~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~ 179 (404)
T 3fg2_P 104 LATG--ARNRMLDVPNASLP--DVLYLRTLDESEVLRQRMPDKKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMA 179 (404)
T ss_dssp ECCC--EEECCCCSTTTTST--TEECCSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTT
T ss_pred EeeC--CCccCCCCCCCCCC--cEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchh
Confidence 9999 78999988886531 12211111 011122578999999999999999999999999999998774
Q ss_pred --------ccccccCCCCC-CeEEecceeEEecC-Cc---EEEccCcEEecCEEEEcccCCCccCcccccCchhhh----
Q 018550 232 --------DETHEKQPGYD-NMWLHSMVERANED-GT---VVFRNGRVVSADVIMHCTGLTGTSTTTLFLKPMALL---- 294 (354)
Q Consensus 232 --------~~~~~~l~~~~-~~~~~~~v~~v~~~-~~---v~~~~g~~~~~D~vi~a~G~~~~~p~~~~l~~~~~~---- 294 (354)
+...+.+++.+ +++.++.|+++..+ +. |++++|+++++|.||+|+|+. |++++++..+..
T Consensus 180 ~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~~---p~~~l~~~~gl~~~~G 256 (404)
T 3fg2_P 180 RVVTPEISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGVI---PNVEIAAAAGLPTAAG 256 (404)
T ss_dssp TTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCEE---ECCHHHHHTTCCBSSS
T ss_pred hccCHHHHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCCc---cCHHHHHhCCCCCCCC
Confidence 11122233444 88999999999854 32 778899999999999999999 777776543322
Q ss_pred ----------hceeeeecccchh----------------hHHHHHHHhhhccCCCcccccCCCCCccccC
Q 018550 295 ----------LWMTIVLGHCTST----------------FFRQSWHQAFHLLGYHRRLSLSPSLNSRASG 338 (354)
Q Consensus 295 ----------~~~i~a~GD~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (354)
..+|||+|||+.. ...|+...|.++.|....+...|.+++..++
T Consensus 257 i~vd~~~~t~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~p~~~~~~~~ 326 (404)
T 3fg2_P 257 IIVDQQLLTSDPHISAIGDCALFESVRFGETMRVESVQNATDQARCVAARLTGDAKPYDGYPWFWSDQGD 326 (404)
T ss_dssp EEECTTSBCSSTTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHHHHHHTTTCCCCCCCCCEEEEEETT
T ss_pred EEECCCcccCCCCEEEeecceeecCccCCceeeehHHHHHHHHHHHHHHHhCCCCCCCCCCCceEeEECC
Confidence 2459999999762 3456777788888765544444444443333
No 70
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=99.96 E-value=1.1e-29 Score=234.53 Aligned_cols=260 Identities=18% Similarity=0.282 Sum_probs=176.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHHc--CCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLRE--GHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMG 79 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~--g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (354)
+++|+|||||++|+++|..|++. +.+|+|||+++.++..... .|..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~-----------------------------~p~~--- 50 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCG-----------------------------IPYV--- 50 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC-----------------------------------------
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcC-----------------------------Cccc---
Confidence 47999999999999999999998 7899999998754321100 0000
Q ss_pred ccCCCCCccCCCCCCCCCCCCCHHHHHHHH-HHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEE
Q 018550 80 FQAYPFVARNYEGSVDLRRYPGHEEVLRYL-QNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAV 158 (354)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~v 158 (354)
+.+. .....+..+. ..+.++.+++ ++++++|++++. +.+.+.+.++ ..++.||+|
T Consensus 51 ~~~~----------------~~~~~~~~~~~~~~~~~~gi~--v~~~~~v~~i~~---~~~~v~~~~g---~~~~~~d~l 106 (449)
T 3kd9_A 51 VEGL----------------STPDKLMYYPPEVFIKKRGID--LHLNAEVIEVDT---GYVRVRENGG---EKSYEWDYL 106 (449)
T ss_dssp -------------------------------CTHHHHTTCE--EETTCEEEEECS---SEEEEECSSS---EEEEECSEE
T ss_pred cCCC----------------CCHHHhhhcCHHHHHHhcCcE--EEecCEEEEEec---CCCEEEECCc---eEEEEcCEE
Confidence 0000 0012333333 3334677888 999999999864 4466665443 247899999
Q ss_pred EEeeCCCCCcccCCCCCCCCCCcceeecccCC-------CCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC
Q 018550 159 VVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYR-------IPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA 231 (354)
Q Consensus 159 IlAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~-------~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~ 231 (354)
|+||| +.|+.|+++|.+.. ..+...... ....+.+++++|||+|++|+|+|..|++.|.+|+++.+.+.
T Consensus 107 viAtG--~~p~~p~i~G~~~~--~v~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 182 (449)
T 3kd9_A 107 VFANG--ASPQVPAIEGVNLK--GVFTADLPPDALAIREYMEKYKVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGER 182 (449)
T ss_dssp EECCC--EEECCCSCBTTTST--TEECSCSTHHHHHHHHHHSSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred EECCC--CCCCCCCCCCCCCC--CEEEeCCHHHHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCc
Confidence 99999 88999988887541 122111110 01123678999999999999999999999999999999774
Q ss_pred --c---------cccccCCCCCCeEEecceeEEecCCc--EEEccCcEEecCEEEEcccCCCccCcccccCchhhh----
Q 018550 232 --D---------ETHEKQPGYDNMWLHSMVERANEDGT--VVFRNGRVVSADVIMHCTGLTGTSTTTLFLKPMALL---- 294 (354)
Q Consensus 232 --~---------~~~~~l~~~~~~~~~~~v~~v~~~~~--v~~~~g~~~~~D~vi~a~G~~~~~p~~~~l~~~~~~---- 294 (354)
. ...+.+.+..+++.++.+.++..++. .+..+++++++|.||+|+|++ |++++++..+..
T Consensus 183 ~l~~~~~~~~~~~l~~~l~~~v~i~~~~~v~~i~~~~~v~~v~~~g~~i~~D~Vv~a~G~~---p~~~l~~~~gl~~~~~ 259 (449)
T 3kd9_A 183 VLRRSFDKEVTDILEEKLKKHVNLRLQEITMKIEGEERVEKVVTDAGEYKAELVILATGIK---PNIELAKQLGVRIGET 259 (449)
T ss_dssp TTTTTSCHHHHHHHHHHHTTTSEEEESCCEEEEECSSSCCEEEETTEEEECSEEEECSCEE---ECCHHHHHTTCCBCTT
T ss_pred cchhhcCHHHHHHHHHHHHhCcEEEeCCeEEEEeccCcEEEEEeCCCEEECCEEEEeeCCc---cCHHHHHhCCccCCCC
Confidence 1 11222333367888999999986543 456678899999999999999 777766543322
Q ss_pred ------------hceeeeecccch----------------hhHHHHHHHhhhccCCCc
Q 018550 295 ------------LWMTIVLGHCTS----------------TFFRQSWHQAFHLLGYHR 324 (354)
Q Consensus 295 ------------~~~i~a~GD~~~----------------~~~~~~~~~~~~~~~~~~ 324 (354)
..+|||+|||+. ....|+...+.++.|...
T Consensus 260 G~i~vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~~aa~~i~g~~~ 317 (449)
T 3kd9_A 260 GAIWTNEKMQTSVENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGSNIAGKEL 317 (449)
T ss_dssp SSBCCCTTCBCSSTTEEECSTTBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTTCCC
T ss_pred CCEEECCCCccCCCCEEEeeeeeeeccccCCceEEeccHHHHHHHHHHHHHHhcCCCc
Confidence 134999999973 245667777888876544
No 71
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.96 E-value=3.1e-30 Score=236.55 Aligned_cols=262 Identities=15% Similarity=0.125 Sum_probs=177.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCC--cEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhccccccc
Q 018550 1 MFRHVAVIGAGAAGLVVGHELLREGH--TVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELM 78 (354)
Q Consensus 1 ~~~~vvIIG~G~aG~~~a~~l~~~g~--~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (354)
|+++|+|||||++|+++|..|++.|. +|+|||+++.++..... +.......
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~-------------------------l~~~~~~~-- 55 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPP-------------------------LSKAYLAG-- 55 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGG-------------------------GGTTTTTT--
T ss_pred CCCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCC-------------------------CcHHHhCC--
Confidence 35899999999999999999999998 79999987543110000 00000000
Q ss_pred cccCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEE
Q 018550 79 GFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAV 158 (354)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~v 158 (354)
.... ..+.....+.+.+.+++ ++++++|+.++..+ ..+.+.++. ++.||+|
T Consensus 56 ---~~~~-----------------~~~~~~~~~~~~~~gv~--~~~~~~v~~i~~~~---~~v~~~~g~----~~~~d~l 106 (431)
T 1q1r_A 56 ---KATA-----------------ESLYLRTPDAYAAQNIQ--LLGGTQVTAINRDR---QQVILSDGR----ALDYDRL 106 (431)
T ss_dssp ---CSCS-----------------GGGBSSCHHHHHHTTEE--EECSCCEEEEETTT---TEEEETTSC----EEECSEE
T ss_pred ---CCCh-----------------HHhcccCHHHHHhCCCE--EEeCCEEEEEECCC---CEEEECCCC----EEECCEE
Confidence 0000 11100112334567887 88899999998643 467776654 7999999
Q ss_pred EEeeCCCCCcccCCCCCCCCCCc-c-eeecccCC-----CCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC
Q 018550 159 VVCNGHFSVPRLAQVPGIDSWPG-K-QMHSHNYR-----IPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA 231 (354)
Q Consensus 159 IlAtG~~s~~~~p~~~g~~~~~~-~-~~~~~~~~-----~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~ 231 (354)
|+||| +.|+.|+++|.+. .+ . +....... ......+++++|||+|.+|+|+|..|++.|.+|+++.+.+.
T Consensus 107 viAtG--~~p~~~~i~G~~~-~~~~~v~~~~~~~d~~~l~~~l~~~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~ 183 (431)
T 1q1r_A 107 VLATG--GRPRPLPVASGAV-GKANNFRYLRTLEDAECIRRQLIADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAAR 183 (431)
T ss_dssp EECCC--EEECCCGGGTTHH-HHSTTEEESSSHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred EEcCC--CCccCCCCCCccc-CCCceEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCc
Confidence 99999 7888888887642 11 0 22211110 11123579999999999999999999999999999998764
Q ss_pred c-----------cccccCCCCC-CeEEecceeEEec--C-Cc---EEEccCcEEecCEEEEcccCCCccCcccccCchhh
Q 018550 232 D-----------ETHEKQPGYD-NMWLHSMVERANE--D-GT---VVFRNGRVVSADVIMHCTGLTGTSTTTLFLKPMAL 293 (354)
Q Consensus 232 ~-----------~~~~~l~~~~-~~~~~~~v~~v~~--~-~~---v~~~~g~~~~~D~vi~a~G~~~~~p~~~~l~~~~~ 293 (354)
. ...+.+++.+ +++.++.|+++.. + +. |++++|+++++|.||+|+|++ |++++++..+.
T Consensus 184 ~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~---p~~~l~~~~gl 260 (431)
T 1q1r_A 184 VLERVTAPPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLI---PNCELASAAGL 260 (431)
T ss_dssp TTTTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEE---ECCHHHHHTTC
T ss_pred cccchhhHHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCC---cCcchhhccCC
Confidence 1 1122233444 8899999999975 3 32 677889999999999999999 77777654332
Q ss_pred h--------------hceeeeecccchh----------------hHHHHHHHhhhccCCCc
Q 018550 294 L--------------LWMTIVLGHCTST----------------FFRQSWHQAFHLLGYHR 324 (354)
Q Consensus 294 ~--------------~~~i~a~GD~~~~----------------~~~~~~~~~~~~~~~~~ 324 (354)
. ..+|||+|||+.. ...|+...|.++.+...
T Consensus 261 ~~~~gi~Vd~~~~ts~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~ 321 (431)
T 1q1r_A 261 QVDNGIVINEHMQTSDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAAILCGKVP 321 (431)
T ss_dssp CBSSSEECCTTSBCSSTTEEECGGGEEEEETTTTEEEECCSHHHHHHHHHHHHHHHTTCCC
T ss_pred CCCCCEEECCCcccCCCCEEEEEeEEEEccccCCceEeeCHHHHHHHHHHHHHHHhcCCCC
Confidence 1 2459999999863 34566777888876543
No 72
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.96 E-value=3.6e-29 Score=231.29 Aligned_cols=264 Identities=18% Similarity=0.234 Sum_probs=176.4
Q ss_pred CeEEEEcCChHHHHHHHHHHHc--CCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhccccccccc
Q 018550 3 RHVAVIGAGAAGLVVGHELLRE--GHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGF 80 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~--g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (354)
++|+|||||++|+++|..|++. |.+|+|||+++.++..... . .... . ....
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~---------------------~-~~~~---~-g~~~- 53 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCG---------------------I-ALYL---G-KEIK- 53 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGG---------------------H-HHHH---T-TCBG-
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCccccc---------------------c-hhhh---c-CCcc-
Confidence 5899999999999999999998 9999999997644211000 0 0000 0 0000
Q ss_pred cCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEE
Q 018550 81 QAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVV 160 (354)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIl 160 (354)
.... .++...+.+.+.+.+++ +++++++..++..+ +.+.+.... ++...++.||+||+
T Consensus 54 -~~~~-----------------~~~~~~~~~~~~~~gv~--~~~~~~v~~i~~~~-~~v~v~~~~-~g~~~~~~~d~lvi 111 (452)
T 2cdu_A 54 -NNDP-----------------RGLFYSSPEELSNLGAN--VQMRHQVTNVDPET-KTIKVKDLI-TNEEKTEAYDKLIM 111 (452)
T ss_dssp -GGCG-----------------GGGBSCCHHHHHHTTCE--EEESEEEEEEEGGG-TEEEEEETT-TCCEEEEECSEEEE
T ss_pred -cCCH-----------------HHhhhcCHHHHHHcCCE--EEeCCEEEEEEcCC-CEEEEEecC-CCceEEEECCEEEE
Confidence 0000 11111123334567888 88899999998655 444443311 11124799999999
Q ss_pred eeCCCCCcccCCCCCCCCCCcceeecccCCCC-----CCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC--c-
Q 018550 161 CNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIP-----NPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA--D- 232 (354)
Q Consensus 161 AtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~-----~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~--~- 232 (354)
||| +.|+.|+++|.+.. ..++...+.+. ....+++++|||+|.+|+|+|..|++.|.+|+++++.+. .
T Consensus 112 AtG--s~p~~p~i~g~~~~--~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~ 187 (452)
T 2cdu_A 112 TTG--SKPTVPPIPGIDSS--RVYLCKNYNDAKKLFEEAPKAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYK 187 (452)
T ss_dssp CCC--EEECCCCCTTTTST--TEEECSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTT
T ss_pred ccC--CCcCCCCCCCCCCC--CEEEeCcHHHHHHHHHHhccCCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhh
Confidence 999 88999998887531 23332222111 112578999999999999999999999999999998764 1
Q ss_pred --------cccccCCCCC-CeEEecceeEEec-CCcE--EEccCcEEecCEEEEcccCCCccCcccccCchhhh------
Q 018550 233 --------ETHEKQPGYD-NMWLHSMVERANE-DGTV--VFRNGRVVSADVIMHCTGLTGTSTTTLFLKPMALL------ 294 (354)
Q Consensus 233 --------~~~~~l~~~~-~~~~~~~v~~v~~-~~~v--~~~~g~~~~~D~vi~a~G~~~~~p~~~~l~~~~~~------ 294 (354)
...+.+++.+ +++.++.|+++.. ++.+ +..+|+++++|.||+|+|++ |++++++.. ..
T Consensus 188 ~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~~g~~i~~D~vv~a~G~~---p~~~ll~~~-l~~~~~G~ 263 (452)
T 2cdu_A 188 YFDKEFTDILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTLDGKEIKSDIAILCIGFR---PNTELLKGK-VAMLDNGA 263 (452)
T ss_dssp TSCHHHHHHHHHHHHHTTCEEEESSCEEEEEEETTEEEEEETTSCEEEESEEEECCCEE---ECCGGGTTT-SCBCTTSC
T ss_pred hhhhhHHHHHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEeCCCEEECCEEEECcCCC---CCHHHHHHh-hhcCCCCC
Confidence 1122334445 8999999999985 4433 33478899999999999999 777776543 11
Q ss_pred ----------hceeeeecccchh----------------hHHHHHHHhhhccCCC
Q 018550 295 ----------LWMTIVLGHCTST----------------FFRQSWHQAFHLLGYH 323 (354)
Q Consensus 295 ----------~~~i~a~GD~~~~----------------~~~~~~~~~~~~~~~~ 323 (354)
..+|||+|||+.. ...|+...+.++.+..
T Consensus 264 i~Vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~ 318 (452)
T 2cdu_A 264 IITDEYMHSSNRDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVGLNLTEDK 318 (452)
T ss_dssp BCCCTTSBCSSTTEEECSTTBCEEETTTTEEECCCCHHHHHHHHHHHHHTSSSCC
T ss_pred EEECCCcCcCCCCEEEcceEEEeccccCCCeeecchHHHHHHHHHHHHHHhCCCC
Confidence 1349999999862 3466777788887643
No 73
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.96 E-value=6.1e-29 Score=225.00 Aligned_cols=261 Identities=16% Similarity=0.225 Sum_probs=180.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcC--CcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREG--HTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMG 79 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g--~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (354)
+++|+|||||++|+++|..|++.| .+|+++|+++ |..+... .+..
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~--g~~~~~~--------------------~l~~----------- 50 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD--GRSYSKP--------------------MLST----------- 50 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC--CCEECGG--------------------GGGG-----------
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC--CCccCcc--------------------cccH-----------
Confidence 479999999999999999999998 5799999864 3222210 0000
Q ss_pred ccCCCCCccCCCCCCCCCCCCCHHHHHH-HHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEE
Q 018550 80 FQAYPFVARNYEGSVDLRRYPGHEEVLR-YLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAV 158 (354)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~v 158 (354)
.+... ....++.. ++.+++++.+++ ++.++++..++..+ +++.+.+ .++.||+|
T Consensus 51 --~~~~~-------------~~~~~~~~~~~~~~~~~~~v~--~~~~~~v~~i~~~~---~~v~~~~-----~~~~~d~l 105 (384)
T 2v3a_A 51 --GFSKN-------------KDADGLAMAEPGAMAEQLNAR--ILTHTRVTGIDPGH---QRIWIGE-----EEVRYRDL 105 (384)
T ss_dssp --TTTTT-------------CCHHHHEEECHHHHHHHTTCE--EECSCCCCEEEGGG---TEEEETT-----EEEECSEE
T ss_pred --HHhCC-------------CCHHHhhccCHHHHHHhCCcE--EEeCCEEEEEECCC---CEEEECC-----cEEECCEE
Confidence 00000 01133322 455666778888 88888888887533 4566543 27999999
Q ss_pred EEeeCCCCCcccCCCCCCCCCCcceeecccCCCC-----CCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC--
Q 018550 159 VVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIP-----NPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA-- 231 (354)
Q Consensus 159 IlAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~-----~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~-- 231 (354)
|+||| +.|+.|+++|... ...++.....+. ....+++++|||+|.+|+|+|..|++.|.+|+++++.+.
T Consensus 106 viAtG--~~p~~p~i~g~~~--~~v~~~~~~~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~ 181 (384)
T 2v3a_A 106 VLAWG--AEPIRVPVEGDAQ--DALYPINDLEDYARFRQAAAGKRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVM 181 (384)
T ss_dssp EECCC--EEECCCCCBSTTT--TCEEECSSHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS
T ss_pred EEeCC--CCcCCCCCCCcCc--CCEEEECCHHHHHHHHHhhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchh
Confidence 99999 8899988888653 123333222110 112479999999999999999999999999999998764
Q ss_pred ---------ccccccCCCCC-CeEEecceeEEecCC---cEEEccCcEEecCEEEEcccCCCccCcccccCchhh-----
Q 018550 232 ---------DETHEKQPGYD-NMWLHSMVERANEDG---TVVFRNGRVVSADVIMHCTGLTGTSTTTLFLKPMAL----- 293 (354)
Q Consensus 232 ---------~~~~~~l~~~~-~~~~~~~v~~v~~~~---~v~~~~g~~~~~D~vi~a~G~~~~~p~~~~l~~~~~----- 293 (354)
+...+.+++.+ +++.++.|+++..++ .+++++|+++++|.||+|+|+. |++++++..+.
T Consensus 182 ~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~~---p~~~l~~~~g~~~~~g 258 (384)
T 2v3a_A 182 PGLLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGLR---PRTELAFAAGLAVNRG 258 (384)
T ss_dssp TTTSCHHHHHHHHHHHHTTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEE---ECCHHHHHTTCCBSSS
T ss_pred hcccCHHHHHHHHHHHHHcCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCCC---cCHHHHHHCCCCCCCC
Confidence 11122334445 899999999997543 2677888899999999999999 77766543322
Q ss_pred ---------hhceeeeecccch--h--------hHHHHHHHhhhccCCCcccc
Q 018550 294 ---------LLWMTIVLGHCTS--T--------FFRQSWHQAFHLLGYHRRLS 327 (354)
Q Consensus 294 ---------~~~~i~a~GD~~~--~--------~~~~~~~~~~~~~~~~~~~~ 327 (354)
...+|||+|||+. . ...|+...+.++.|....+.
T Consensus 259 i~vd~~~~t~~~~IyA~GD~~~~~~~~~~~~~~a~~~g~~~a~~i~g~~~~~~ 311 (384)
T 2v3a_A 259 IVVDRSLRTSHANIYALGDCAEVDGLNLLYVMPLMACARALAQTLAGNPSQVA 311 (384)
T ss_dssp EEECTTCBCSSTTEEECGGGEEETTBCCCSHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred EEECCCCCCCCCCEEEeeeeeeECCCCcchHHHHHHHHHHHHHHhcCCCccCC
Confidence 1245999999984 1 24567777888877554443
No 74
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.96 E-value=1.1e-28 Score=227.79 Aligned_cols=260 Identities=21% Similarity=0.206 Sum_probs=173.9
Q ss_pred CeEEEEcCChHHHHHHHHHHHc--CCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhccccccccc
Q 018550 3 RHVAVIGAGAAGLVVGHELLRE--GHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGF 80 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~--g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (354)
++|+|||||++|+++|..|++. |.+|+|||+++.++.. .. ..... ...
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~-~~---------------------~~~~~---~~~----- 50 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFL-SA---------------------GMQLY---LEG----- 50 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBC-GG---------------------GHHHH---HTT-----
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcc-cc---------------------cchhh---hcC-----
Confidence 5899999999999999999998 8999999997654310 00 00000 000
Q ss_pred cCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEee-cCCceEEEEeCEEE
Q 018550 81 QAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRK-KDDVVEEETFDAVV 159 (354)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~-g~~~~~~~~~d~vI 159 (354)
.+. ...++..+..+.+.+.+++ ++.++++..++.++ +. +.+.+ .++...++.||+||
T Consensus 51 -~~~----------------~~~~~~~~~~~~~~~~gv~--~~~~~~v~~i~~~~-~~--v~~~~~~~g~~~~~~~d~lv 108 (447)
T 1nhp_A 51 -KVK----------------DVNSVRYMTGEKMESRGVN--VFSNTEITAIQPKE-HQ--VTVKDLVSGEERVENYDKLI 108 (447)
T ss_dssp -SSC----------------CGGGSBSCCHHHHHHTTCE--EEETEEEEEEETTT-TE--EEEEETTTCCEEEEECSEEE
T ss_pred -ccC----------------CHHHhhcCCHHHHHHCCCE--EEECCEEEEEeCCC-CE--EEEEecCCCceEEEeCCEEE
Confidence 000 0011111223344566887 88899999997654 43 44433 11222358999999
Q ss_pred EeeCCCCCcccCCCCCCCCCCcceeecccCCCC-------CCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC-
Q 018550 160 VCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIP-------NPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA- 231 (354)
Q Consensus 160 lAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~-------~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~- 231 (354)
+||| +.|+.|+++|.+. ..+++...+.+. ....+++++|||+|++|+|+|..|++.|.+|+++++.+.
T Consensus 109 iAtG--~~p~~p~i~G~~~--~~v~~~~~~~~~~~l~~~~~~~~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 184 (447)
T 1nhp_A 109 ISPG--AVPFELDIPGKDL--DNIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRP 184 (447)
T ss_dssp ECCC--EEECCCCSTTTTS--BSEECCCHHHHHHHHHHHHTCTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred EcCC--CCcCCCCCCCCCC--CCeEEECCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCccc
Confidence 9999 8899999988753 123332222110 112579999999999999999999999999999998764
Q ss_pred -c---------cccccCCCCC-CeEEecceeEEecCCcE--EEccCcEEecCEEEEcccCCCccCcccccCchhhh----
Q 018550 232 -D---------ETHEKQPGYD-NMWLHSMVERANEDGTV--VFRNGRVVSADVIMHCTGLTGTSTTTLFLKPMALL---- 294 (354)
Q Consensus 232 -~---------~~~~~l~~~~-~~~~~~~v~~v~~~~~v--~~~~g~~~~~D~vi~a~G~~~~~p~~~~l~~~~~~---- 294 (354)
. ...+.+++.+ +++.++.|+++..++.+ +..+++++++|.||+|+|++ |++++++.. ..
T Consensus 185 l~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~i~~d~vi~a~G~~---p~~~~~~~~-~~~~~~ 260 (447)
T 1nhp_A 185 LGVYLDKEFTDVLTEEMEANNITIATGETVERYEGDGRVQKVVTDKNAYDADLVVVAVGVR---PNTAWLKGT-LELHPN 260 (447)
T ss_dssp TTTTCCHHHHHHHHHHHHTTTEEEEESCCEEEEECSSBCCEEEESSCEEECSEEEECSCEE---ESCGGGTTT-SCBCTT
T ss_pred ccccCCHHHHHHHHHHHHhCCCEEEcCCEEEEEEccCcEEEEEECCCEEECCEEEECcCCC---CChHHHHhh-hhhcCC
Confidence 1 1222334555 88999999999866532 33466789999999999999 666665433 11
Q ss_pred ------------hceeeeecccch----------------hhHHHHHHHhhhccCC
Q 018550 295 ------------LWMTIVLGHCTS----------------TFFRQSWHQAFHLLGY 322 (354)
Q Consensus 295 ------------~~~i~a~GD~~~----------------~~~~~~~~~~~~~~~~ 322 (354)
..+|||+|||+. ....|+...+.++.+.
T Consensus 261 G~i~Vd~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~ 316 (447)
T 1nhp_A 261 GLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVKNLEEP 316 (447)
T ss_dssp SCBCCCTTCBCSSTTEEECGGGSCEEEGGGTEEECCCCHHHHHHHHHHHHHTSSSC
T ss_pred CcEEECccccCCCCCEEEeeeEEEeeccCCCCceechhHHHHHHHHHHHHHhhcCC
Confidence 235999999985 2356677778888664
No 75
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.96 E-value=4.3e-28 Score=226.03 Aligned_cols=211 Identities=18% Similarity=0.202 Sum_probs=144.3
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCC--------------cEEEEeeCCCccceeecCCCCCCCCCCCCCCCCccccccccc
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGH--------------TVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKS 68 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~--------------~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (354)
+||+|||+||+|+++|..|.+.+. ....+|+.+.++ |+.. ...|...+..+.+.+.
T Consensus 40 ~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~--Wh~g--------~~~p~~~~q~~fl~Dl 109 (501)
T 4b63_A 40 HDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFA--WHSG--------MLVPGSKMQISFIKDL 109 (501)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCC--SSGG--------GCCTTCBCSSCGGGSS
T ss_pred CcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCC--cCCC--------CCCCCccccccchhhh
Confidence 689999999999999999987643 566777766544 4331 1111111111222221
Q ss_pred chhccccccccccCCCCCccCC-CCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCC-------CcEE
Q 018550 69 LRVNLPRELMGFQAYPFVARNY-EGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVES-------NKWK 140 (354)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~-------~~~~ 140 (354)
.....|...+.|..|-....++ .+..+...||++.++.+|+++++++++.. ++++++|+++.+.+. +.|+
T Consensus 110 vtl~~P~s~~sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~--vrf~~~V~~v~~~~~~~~~~~~~~~~ 187 (501)
T 4b63_A 110 ATLRDPRSSFTFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDV--VAYGEEVVEVIPGKSDPSSSVVDFFT 187 (501)
T ss_dssp STTTCTTCTTSHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGG--EEESEEEEEEEEECSSTTSSCBCEEE
T ss_pred ccccCCCCccchHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCc--eEcceEEEeeccccccccccccceEE
Confidence 1122222222221111000000 01124567899999999999999998766 999999999998653 2499
Q ss_pred EEEeecC-CceEEEEeCEEEEeeCCCCCcccCCCCCCCCCCcceeecccCCC------CCCCCCCeEEEEccCCCHHHHH
Q 018550 141 VKSRKKD-DVVEEETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRI------PNPFQDQVVILIGHYASGLDIK 213 (354)
Q Consensus 141 v~~~~g~-~~~~~~~~d~vIlAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~------~~~~~~~~v~ViG~G~~g~e~a 213 (354)
|++.++. +...++.++.||+||| ..|.+|.. ..+.+.++|+..|.. ...+.+|+|+|||+|.||+|++
T Consensus 188 V~~~~~~~g~~~~~~ar~vVlatG--~~P~iP~~---~~~~g~v~Hss~y~~~~~~~~~~~~~gKrV~VVG~G~SA~ei~ 262 (501)
T 4b63_A 188 VRSRNVETGEISARRTRKVVIAIG--GTAKMPSG---LPQDPRIIHSSKYCTTLPALLKDKSKPYNIAVLGSGQSAAEIF 262 (501)
T ss_dssp EEEEETTTCCEEEEEEEEEEECCC--CEECCCTT---SCCCTTEEEGGGHHHHHHHHSCCTTSCCEEEEECCSHHHHHHH
T ss_pred EEEecCCCceEEEEEeCEEEECcC--CCCCCCCC---CCCCcceeeccccccchhhccccccCCcEEEEECCcHHHHHHH
Confidence 9998864 3457899999999999 66666654 445668899887753 4567899999999999999999
Q ss_pred HHHhcc--CCEEEEEEecC
Q 018550 214 RDLAGF--AKEVHIASRSV 230 (354)
Q Consensus 214 ~~l~~~--g~~v~~~~r~~ 230 (354)
..|++. +.+|+++.|++
T Consensus 263 ~~L~~~~~~~~v~~~~R~~ 281 (501)
T 4b63_A 263 HDLQKRYPNSRTTLIMRDS 281 (501)
T ss_dssp HHHHHHSTTCEEEEECSSS
T ss_pred HHHHhcCCCceEEEEeCCC
Confidence 999875 68999999986
No 76
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.95 E-value=1.3e-28 Score=228.95 Aligned_cols=263 Identities=19% Similarity=0.268 Sum_probs=174.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHHc--CCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLRE--GHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMG 79 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~--g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (354)
+++|+|||||++|+++|..|++. |.+|+|||+++.++..... . ... ..
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~---------------------~-~~~---~~----- 85 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCG---------------------L-PYV---IS----- 85 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGG---------------------H-HHH---HT-----
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCC---------------------c-chh---hc-----
Confidence 36899999999999999999997 8999999997654311100 0 000 00
Q ss_pred ccCCCCCccCCCCCCCCCCCCCHHHHHHH-HHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEE-eecCCceEEEEeCE
Q 018550 80 FQAYPFVARNYEGSVDLRRYPGHEEVLRY-LQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKS-RKKDDVVEEETFDA 157 (354)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~-~~g~~~~~~~~~d~ 157 (354)
.. . +...++..+ ...+.+.++++ ++++++|..++.++ +.+.+.. .++ ...++.||+
T Consensus 86 --~~-~--------------~~~~~l~~~~~~~~~~~~gv~--~~~~~~v~~i~~~~-~~v~v~~~~~g--~~~~~~~d~ 143 (480)
T 3cgb_A 86 --GA-I--------------ASTEKLIARNVKTFRDKYGID--AKVRHEVTKVDTEK-KIVYAEHTKTK--DVFEFSYDR 143 (480)
T ss_dssp --TS-S--------------SCGGGGBSSCHHHHHHTTCCE--EESSEEEEEEETTT-TEEEEEETTTC--CEEEEECSE
T ss_pred --CC-c--------------CCHHHhhhcCHHHHHhhcCCE--EEeCCEEEEEECCC-CEEEEEEcCCC--ceEEEEcCE
Confidence 00 0 000111111 22233445887 88899999998654 4444443 112 224789999
Q ss_pred EEEeeCCCCCcccCCCCCCCCCCcceeecccCCCC-------CCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecC
Q 018550 158 VVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIP-------NPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (354)
Q Consensus 158 vIlAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~-------~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~ 230 (354)
||+||| +.|+.|+++|.+.. .+++.....+. ....+++++|||+|++|+|+|..|++.|.+|+++.+.+
T Consensus 144 lviAtG--~~p~~p~i~G~~~~--~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 219 (480)
T 3cgb_A 144 LLIATG--VRPVMPEWEGRDLQ--GVHLLKTIPDAERILKTLETNKVEDVTIIGGGAIGLEMAETFVELGKKVRMIERND 219 (480)
T ss_dssp EEECCC--EEECCCCCBTTTSB--TEECCSSHHHHHHHHHHHHSSCCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGG
T ss_pred EEECCC--CcccCCCCCCccCC--CEEEeCCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCC
Confidence 999999 88999988887531 22322111110 01257999999999999999999999999999999876
Q ss_pred C----------ccccccCCCCC-CeEEecceeEEecCCcE--EEccCcEEecCEEEEcccCCCccCcccccCchhhh---
Q 018550 231 A----------DETHEKQPGYD-NMWLHSMVERANEDGTV--VFRNGRVVSADVIMHCTGLTGTSTTTLFLKPMALL--- 294 (354)
Q Consensus 231 ~----------~~~~~~l~~~~-~~~~~~~v~~v~~~~~v--~~~~g~~~~~D~vi~a~G~~~~~p~~~~l~~~~~~--- 294 (354)
. +...+.+++.+ +++.++.|+++..++.+ +..++.++++|.||+|+|+. |++++++..+..
T Consensus 220 ~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~v~~v~~~~~~i~~D~vi~a~G~~---p~~~~l~~~g~~~~~ 296 (480)
T 3cgb_A 220 HIGTIYDGDMAEYIYKEADKHHIEILTNENVKAFKGNERVEAVETDKGTYKADLVLVSVGVK---PNTDFLEGTNIRTNH 296 (480)
T ss_dssp GTTSSSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSBEEEEEETTEEEECSEEEECSCEE---ESCGGGTTSCCCBCT
T ss_pred chhhcCCHHHHHHHHHHHHHcCcEEEcCCEEEEEEcCCcEEEEEECCCEEEcCEEEECcCCC---cChHHHHhCCcccCC
Confidence 3 11222333444 88889999999866543 23345689999999999999 777776544322
Q ss_pred -------------hceeeeecccch----------------hhHHHHHHHhhhccCCC
Q 018550 295 -------------LWMTIVLGHCTS----------------TFFRQSWHQAFHLLGYH 323 (354)
Q Consensus 295 -------------~~~i~a~GD~~~----------------~~~~~~~~~~~~~~~~~ 323 (354)
..+|||+|||+. ....|+...+.++.+..
T Consensus 297 ~G~I~Vd~~~~ts~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 354 (480)
T 3cgb_A 297 KGAIEVNAYMQTNVQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGRLAGLNMLDKR 354 (480)
T ss_dssp TSCBCCCTTSBCSSTTEEECGGGBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTTCC
T ss_pred CCCEEECCCccCCCCCEEEeeeEEEecCCCCCcceecchHHHHHHHHHHHHHHhcCCC
Confidence 235999999983 23566777788887643
No 77
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.95 E-value=1.1e-28 Score=235.73 Aligned_cols=284 Identities=15% Similarity=0.225 Sum_probs=173.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeC-C-------CccceeecCCCCCCCCCCCCCCCCcccccccccchhcc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKG-E-------QVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNL 73 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~-~-------~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (354)
.+||+||||||||+++|..|++.|.+|+|||+. + .+||+|.+. +|.|.+.+...........+.
T Consensus 107 ~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~--------g~iP~~~l~~~~~~~~~~~~~ 178 (598)
T 2x8g_A 107 DYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNV--------GCIPKKLMHQAGLLSHALEDA 178 (598)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHH--------SHHHHHHHHHHHHHHHHHHHH
T ss_pred cccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEecc--------CCCchHHHHHHHHHHHHHhhH
Confidence 479999999999999999999999999999973 2 378887663 555543332221111111111
Q ss_pred ccccccccCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHH-----------HhCCcceEEeceEEEEEEEeCCCcEEEE
Q 018550 74 PRELMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAR-----------EFGVDQVVRLHTEVLNARLVESNKWKVK 142 (354)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----------~~~~~~~v~~~~~v~~i~~~~~~~~~v~ 142 (354)
. .+.+... ......++..+.+++...++ ..+++ +.. .....++ .+.+.
T Consensus 179 ~-------~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~--~~~-~~~~~~~-----~~~v~ 237 (598)
T 2x8g_A 179 E-------HFGWSLD------RSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVT--YLN-AKGRLIS-----PHEVQ 237 (598)
T ss_dssp H-------HTTCCCC------GGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEC-SEEEEEE-----TTEEE
T ss_pred H-------hCCcccc------CCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcE--EEE-EEEEEcC-----CCEEE
Confidence 1 0111000 00011233566666554433 33454 333 3333332 23344
Q ss_pred EeecCCceEEEEeCEEEEeeCCCCCcccCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCCE
Q 018550 143 SRKKDDVVEEETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKE 222 (354)
Q Consensus 143 ~~~g~~~~~~~~~d~vIlAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~ 222 (354)
....++...++.||+||+||| +.|+.|+++|...+ .+++...... ...+++++|||+|++|+|+|..|++.|.+
T Consensus 238 v~~~~g~~~~~~~d~lviAtG--s~p~~p~i~G~~~~---~~~~~~~~~~-~~~~~~vvViGgG~~g~E~A~~l~~~g~~ 311 (598)
T 2x8g_A 238 ITDKNQKVSTITGNKIILATG--ERPKYPEIPGAVEY---GITSDDLFSL-PYFPGKTLVIGASYVALECAGFLASLGGD 311 (598)
T ss_dssp EECTTCCEEEEEEEEEEECCC--EEECCCSSTTHHHH---CEEHHHHTTC-SSCCCSEEEECCSHHHHHHHHHHHHTTCC
T ss_pred EEeCCCCeEEEEeCEEEEeCC--CCCCCCCCCCcccc---eEcHHHHhhC-ccCCCEEEEECCCHHHHHHHHHHHHcCCE
Confidence 433222234789999999999 88999999886542 2233222221 23567899999999999999999999999
Q ss_pred EEEEEecCC----c-----cccccCCCCC-CeEEecceeEEec-------C---CcEE----EccCcEEe--cCEEEEcc
Q 018550 223 VHIASRSVA----D-----ETHEKQPGYD-NMWLHSMVERANE-------D---GTVV----FRNGRVVS--ADVIMHCT 276 (354)
Q Consensus 223 v~~~~r~~~----~-----~~~~~l~~~~-~~~~~~~v~~v~~-------~---~~v~----~~~g~~~~--~D~vi~a~ 276 (354)
|++++++.. + ...+.+++.+ +++.++.++++.. + +.+. ..+|++++ +|.||+|+
T Consensus 312 Vtlv~~~~~l~~~d~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~ 391 (598)
T 2x8g_A 312 VTVMVRSILLRGFDQQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAV 391 (598)
T ss_dssp EEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECS
T ss_pred EEEEECCcCcCcCCHHHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEe
Confidence 999998632 1 1122333444 7888877776632 1 3332 35676655 99999999
Q ss_pred cCCCccCccccc--Cchhh----------------hhceeeeecccchh-------hHHHHHHHhhhccCCC
Q 018550 277 GLTGTSTTTLFL--KPMAL----------------LLWMTIVLGHCTST-------FFRQSWHQAFHLLGYH 323 (354)
Q Consensus 277 G~~~~~p~~~~l--~~~~~----------------~~~~i~a~GD~~~~-------~~~~~~~~~~~~~~~~ 323 (354)
|++ ||++++ ...+. ...+|||+|||+.. ...|+...|.++.+..
T Consensus 392 G~~---p~~~~l~~~~~gl~~~~~G~i~vd~~~~ts~~~VyA~GD~~~~~~~~~~~A~~~g~~aa~~i~~~~ 460 (598)
T 2x8g_A 392 GRE---PQLSKVLCETVGVKLDKNGRVVCTDDEQTTVSNVYAIGDINAGKPQLTPVAIQAGRYLARRLFAGA 460 (598)
T ss_dssp CEE---ECGGGTBCGGGCCCBCTTSCBCCCTTSBCSSTTEEECGGGBTTSCCCHHHHHHHHHHHHHHHHHCC
T ss_pred CCc---cccCccCchhcCceECCCCcEEeCCCCcCCCCCEEEEeeecCCCCccHHHHHHhHHHHHHHHhcCC
Confidence 999 777653 22211 12359999999532 3456666677776543
No 78
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.95 E-value=3.3e-28 Score=234.80 Aligned_cols=228 Identities=23% Similarity=0.385 Sum_probs=169.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
+++|+|||||+||+++|..|++.|++|+|||+++.+||.+.....
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~~----------------------------------- 417 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQ----------------------------------- 417 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTT-----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeecccc-----------------------------------
Confidence 478999999999999999999999999999998888888765210
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEE-EeCEEEE
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEE-TFDAVVV 160 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~-~~d~vIl 160 (354)
++. .....++.+++.+.+++.+++ +++++.|.. . .+ .||+||+
T Consensus 418 -~~~-------------~~~~~~~~~~~~~~~~~~gv~--~~~~~~v~~----------------~----~~~~~d~lvi 461 (671)
T 1ps9_A 418 -IPG-------------KEEFYETLRYYRRMIEVTGVT--LKLNHTVTA----------------D----QLQAFDETIL 461 (671)
T ss_dssp -STT-------------CTTHHHHHHHHHHHHHHHTCE--EEESCCCCS----------------S----SSCCSSEEEE
T ss_pred -CCC-------------HHHHHHHHHHHHHHHHHcCCE--EEeCcEecH----------------H----HhhcCCEEEE
Confidence 000 001145566777777888888 777764421 0 23 8999999
Q ss_pred eeCCCCCcccCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCC-------------------
Q 018550 161 CNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAK------------------- 221 (354)
Q Consensus 161 AtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~------------------- 221 (354)
||| +.|+.|.++|.+. ..+++..+........+++|+|||+|.+|+|+|..|++.|.
T Consensus 462 AtG--~~p~~~~i~G~~~--~~v~~~~~~l~~~~~~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~ 537 (671)
T 1ps9_A 462 ASG--IVPRTPPIDGIDH--PKVLSYLDVLRDKAPVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSL 537 (671)
T ss_dssp CCC--EEECCCCCBTTTS--TTEEEHHHHHTSCCCCCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTC
T ss_pred ccC--CCcCCCCCCCCCC--CcEeeHHHHhhCCCCCCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhcccccc
Confidence 999 7899999988765 23455444444444568999999999999999999998763
Q ss_pred ------------------EEEEEEecCC--cc---------ccccCCCCC-CeEEecceeEEecCCcEEE-ccC--cEEe
Q 018550 222 ------------------EVHIASRSVA--DE---------THEKQPGYD-NMWLHSMVERANEDGTVVF-RNG--RVVS 268 (354)
Q Consensus 222 ------------------~v~~~~r~~~--~~---------~~~~l~~~~-~~~~~~~v~~v~~~~~v~~-~~g--~~~~ 268 (354)
+|+++.+.+. .. ..+.+++.+ +++.++.++++..++ +++ .+| ++++
T Consensus 538 ~~~~~~~~~~~~~~~~~~~v~l~~~~~~~l~~~l~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~-v~~~~~G~~~~i~ 616 (671)
T 1ps9_A 538 QQAGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDDDG-LHVVINGETQVLA 616 (671)
T ss_dssp CSGGGBCTTCCCCCCCSSEEEEECSSCSCTTTTSCTTTHHHHHHHHHHTTCEEECSCEEEEEETTE-EEEEETTEEEEEC
T ss_pred cccccccccccccCCCCcEEEEEEecchhhccccccccHHHHHHHHHhcCCEEEeCcEEEEEeCCe-EEEecCCeEEEEe
Confidence 4566665432 00 122333444 888899999998766 666 677 6799
Q ss_pred cCEEEEcccCCCccCcccccCchhhhhceeeeecccchhh
Q 018550 269 ADVIMHCTGLTGTSTTTLFLKPMALLLWMTIVLGHCTSTF 308 (354)
Q Consensus 269 ~D~vi~a~G~~~~~p~~~~l~~~~~~~~~i~a~GD~~~~~ 308 (354)
+|.||+|+|++ ||++++..+.....+||++|||....
T Consensus 617 ~D~Vi~a~G~~---p~~~l~~~l~~~g~~v~aiGD~~~~~ 653 (671)
T 1ps9_A 617 VDNVVICAGQE---PNRALAQPLIDSGKTVHLIGGCDVAM 653 (671)
T ss_dssp CSEEEECCCEE---ECCTTHHHHHTTTCCEEECGGGTCCS
T ss_pred CCEEEECCCcc---ccHHHHHHHHhcCCCEEEECCcCccC
Confidence 99999999999 88888776655567899999998743
No 79
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.95 E-value=2.8e-28 Score=235.94 Aligned_cols=245 Identities=18% Similarity=0.186 Sum_probs=179.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
+++|+|||||++|+++|..|+++|++|+|||+++.+||.+.....
T Consensus 391 ~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~~~~----------------------------------- 435 (690)
T 3k30_A 391 DARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQESA----------------------------------- 435 (690)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHHHHT-----------------------------------
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeeeccC-----------------------------------
Confidence 478999999999999999999999999999999889988765210
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHh-CCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEE
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREF-GVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVV 160 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIl 160 (354)
++ .+.....+.+++...+.++ +++ ++++++++ ..+. .++.+|+||+
T Consensus 436 -~p-------------~~~~~~~~~~~~~~~~~~~~gv~--~~~~~~v~-------------~~~~----~~~~~d~lvl 482 (690)
T 3k30_A 436 -LP-------------GLSAWGRVKEYREAVLAELPNVE--IYRESPMT-------------GDDI----VEFGFEHVIT 482 (690)
T ss_dssp -ST-------------TCGGGGHHHHHHHHHHHTCTTEE--EESSCCCC-------------HHHH----HHTTCCEEEE
T ss_pred -CC-------------chhHHHHHHHHHHHHHHHcCCCE--EEECCeec-------------HHHH----hhcCCCEEEE
Confidence 00 0011267788888888776 676 66665431 1111 2578999999
Q ss_pred eeCCCCC--------cccCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEc--cCCCHHHHHHHHhccCCEEEEEEecC
Q 018550 161 CNGHFSV--------PRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIG--HYASGLDIKRDLAGFAKEVHIASRSV 230 (354)
Q Consensus 161 AtG~~s~--------~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG--~G~~g~e~a~~l~~~g~~v~~~~r~~ 230 (354)
||| +. +..|.++|.+. ..+++..++.......+++++||| +|.+|+|+|..|++.|.+|+++++.+
T Consensus 483 AtG--~~~~~~~~~~~~~~~i~G~~~--~~v~~~~~~l~~~~~~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~ 558 (690)
T 3k30_A 483 ATG--ATWRTDGVARFHTTALPIAEG--MQVLGPDDLFAGRLPDGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGA 558 (690)
T ss_dssp CCC--EEECSSCCSSSCSSCCCBCTT--SEEECHHHHHTTCCCSSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSS
T ss_pred cCC--CccccccccccCCCCCCCCCC--CcEEcHHHHhCCCCCCCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccc
Confidence 999 55 44677777654 244554444444555678999999 99999999999999999999999876
Q ss_pred C--c---------cccccCCCCC-CeEEecceeEEecCCcEEEc-----cCcEEecCEEEEcccCCCccCcccccCchhh
Q 018550 231 A--D---------ETHEKQPGYD-NMWLHSMVERANEDGTVVFR-----NGRVVSADVIMHCTGLTGTSTTTLFLKPMAL 293 (354)
Q Consensus 231 ~--~---------~~~~~l~~~~-~~~~~~~v~~v~~~~~v~~~-----~g~~~~~D~vi~a~G~~~~~p~~~~l~~~~~ 293 (354)
. . ...+.+++.+ +++.++.|+++..++ +.+. +++++++|.||+|+|++ |+++++.....
T Consensus 559 ~l~~~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~-~~v~~~~~~~~~~i~aD~VV~A~G~~---p~~~l~~~l~~ 634 (690)
T 3k30_A 559 QVSSWTNNTFEVNRIQRRLIENGVARVTDHAVVAVGAGG-VTVRDTYASIERELECDAVVMVTARL---PREELYLDLVA 634 (690)
T ss_dssp STTGGGGGGTCHHHHHHHHHHTTCEEEESEEEEEEETTE-EEEEETTTCCEEEEECSEEEEESCEE---ECCHHHHHHHH
T ss_pred ccccccccchhHHHHHHHHHHCCCEEEcCcEEEEEECCe-EEEEEccCCeEEEEECCEEEECCCCC---CChHHHHHHhh
Confidence 4 1 1122334445 899999999998776 3332 34689999999999999 88888766544
Q ss_pred h-----hceeeeecccchh-----hHHHHHHHhhhccCC
Q 018550 294 L-----LWMTIVLGHCTST-----FFRQSWHQAFHLLGY 322 (354)
Q Consensus 294 ~-----~~~i~a~GD~~~~-----~~~~~~~~~~~~~~~ 322 (354)
. ..+||++|||... ...|+...|.++.+.
T Consensus 635 ~~~~t~~~~VyaiGD~~~~~~~~~A~~~g~~aa~~i~~~ 673 (690)
T 3k30_A 635 RRDAGEIASVRGIGDAWAPGTIAAAVWSGRRAAEEFDAV 673 (690)
T ss_dssp HHHHTSCSEEEECGGGTSCBCHHHHHHHHHHHHHHTTCC
T ss_pred hhcccCCCCEEEEeCCCchhhHHHHHHHHHHHHHHHHhh
Confidence 3 3689999999974 345666667776554
No 80
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.94 E-value=2.7e-27 Score=229.91 Aligned_cols=249 Identities=14% Similarity=0.137 Sum_probs=170.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
+++|+|||||+||+++|..|++.|++|+|||+.+.+||.+..... .|
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~~--------~p------------------------- 435 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQVAA--------LP------------------------- 435 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHHTT--------ST-------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeeccc--------CC-------------------------
Confidence 478999999999999999999999999999999889998876311 00
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHh------CCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEe
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREF------GVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETF 155 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~ 155 (354)
+ ++....+.+++...++.+ +++ +..+ ..++..++ ..+.|
T Consensus 436 g----------------~~~~~~~~~~~~~~i~~~~~~~~~~v~--i~~~-------------~~v~~~~~----~~~~~ 480 (729)
T 1o94_A 436 G----------------LGEWSYHRDYRETQITKLLKKNKESQL--ALGQ-------------KPMTADDV----LQYGA 480 (729)
T ss_dssp T----------------CGGGHHHHHHHHHHHHHHHHHSTTCEE--ECSC-------------CCCCHHHH----HTSCC
T ss_pred C----------------hHHHHHHHHHHHHHHHHhhcccCCceE--EEeC-------------eEEehhhc----cccCC
Confidence 0 001144555555555443 121 2111 12223332 25789
Q ss_pred CEEEEeeCCCCC------cccCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEc--cCCCHHHHHHHHhccCCEEEEEE
Q 018550 156 DAVVVCNGHFSV------PRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIG--HYASGLDIKRDLAGFAKEVHIAS 227 (354)
Q Consensus 156 d~vIlAtG~~s~------~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG--~G~~g~e~a~~l~~~g~~v~~~~ 227 (354)
|+||+|||+... |+.|+++|.+.+...+++..++.......+++|+||| +|.+|+|+|..|++.|.+|++++
T Consensus 481 d~vviAtG~~~~~~~~~~p~~~~ipG~~~~~~~v~~~~~~l~~~~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~ 560 (729)
T 1o94_A 481 DKVIIATGARWNTDGTNCLTHDPIPGADASLPDQLTPEQVMDGKKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVS 560 (729)
T ss_dssp SEEEECCCEEECSSCCCTTTSSCCTTCCTTSTTEECHHHHHHCCSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEcCCCCcccccccCccCCCCCCccccCCCEEEHHHHhcCCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEe
Confidence 999999994211 5677888876443345554444433444678999999 99999999999999999999999
Q ss_pred ecCC----------ccccccCCCCC-CeEEecceeEEecCCcEEE----ccC-cE------------------EecCEEE
Q 018550 228 RSVA----------DETHEKQPGYD-NMWLHSMVERANEDGTVVF----RNG-RV------------------VSADVIM 273 (354)
Q Consensus 228 r~~~----------~~~~~~l~~~~-~~~~~~~v~~v~~~~~v~~----~~g-~~------------------~~~D~vi 273 (354)
+.+. ....+.+++.+ +++.++.++++..++ +++ .++ ++ +++|.||
T Consensus 561 ~~~l~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv 639 (729)
T 1o94_A 561 GVHLANYMHFTLEYPNMMRRLHELHVEELGDHFCSRIEPGR-MEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLV 639 (729)
T ss_dssp SSCTTHHHHHTTCHHHHHHHHHHTTCEEECSEEEEEEETTE-EEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEE
T ss_pred cccccccccccccHHHHHHHHHhCCCEEEcCcEEEEEECCe-EEEEEecCCceEEecccccccccccCCcceeeeCCEEE
Confidence 8762 11223333444 889999999998765 433 233 32 8999999
Q ss_pred EcccCCCccCcccccCchhh--------hhceeeeecccchh-----hHHHHHHHhhhccCC
Q 018550 274 HCTGLTGTSTTTLFLKPMAL--------LLWMTIVLGHCTST-----FFRQSWHQAFHLLGY 322 (354)
Q Consensus 274 ~a~G~~~~~p~~~~l~~~~~--------~~~~i~a~GD~~~~-----~~~~~~~~~~~~~~~ 322 (354)
+|+|++ |+++++.+... ...+|||+|||... ...|+...|.++.++
T Consensus 640 ~a~G~~---p~~~l~~~l~~~vd~~~~t~~~~VyAiGD~~~~~~~~~A~~~G~~aA~~i~~~ 698 (729)
T 1o94_A 640 LVTGRH---SECTLWNELKARESEWAENDIKGIYLIGDAEAPRLIADATFTGHRVAREIEEA 698 (729)
T ss_dssp EESCEE---ECCHHHHHHHHTGGGTGGGTCCEEEECGGGTSCCCHHHHHHHHHHHHHTTTSS
T ss_pred ECCCCC---CChHHHHHHhhhcccccccCCCCeEEEeCccchhhHHHHHHHHHHHHHHhhhh
Confidence 999999 88777654332 12579999999873 345566667776443
No 81
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.94 E-value=9.9e-29 Score=230.16 Aligned_cols=289 Identities=15% Similarity=0.130 Sum_probs=173.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHc--CCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLRE--GHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMG 79 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~--g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (354)
.++|+|||||+||+++|..|++. +.+|+|||+++.++-.. +.+.+.++...... .. ....
T Consensus 11 ~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r------------~~lsk~l~~~~~~~-~~-----~~~~ 72 (493)
T 1m6i_A 11 HVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMR------------PPLSKELWFSDDPN-VT-----KTLR 72 (493)
T ss_dssp EEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCS------------GGGGTGGGCC--CT-HH-----HHCE
T ss_pred cCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCC------------CCCCHHhhcCCccc-hh-----hccc
Confidence 36899999999999999999887 78999999986543110 11111111110000 00 0000
Q ss_pred ccCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEE
Q 018550 80 FQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVV 159 (354)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vI 159 (354)
+.+++........ .....|.....+.+ ..+.+++ ++.+++|++++... ++|.+.++. ++.||+||
T Consensus 73 ~~~~~~~~~~~~~-~~~~~~~~~~~l~~-----~~~~gv~--~~~g~~v~~id~~~---~~V~~~~g~----~i~yd~lv 137 (493)
T 1m6i_A 73 FKQWNGKERSIYF-QPPSFYVSAQDLPH-----IENGGVA--VLTGKKVVQLDVRD---NMVKLNDGS----QITYEKCL 137 (493)
T ss_dssp EECTTSCEEESBS-SCGGGSBCTTTTTT-----STTCEEE--EEETCCEEEEEGGG---TEEEETTSC----EEEEEEEE
T ss_pred ccccccccccccc-cchHhhcchhhhhh-----hhcCCeE--EEcCCEEEEEECCC---CEEEECCCC----EEECCEEE
Confidence 1111100000000 00000000011100 1234555 88888999998643 567777664 79999999
Q ss_pred EeeCCCCCcccCCCCCCCC--CCcceeecccCCC-----CCCCCCCeEEEEccCCCHHHHHHHHhc----cCCEEEEEEe
Q 018550 160 VCNGHFSVPRLAQVPGIDS--WPGKQMHSHNYRI-----PNPFQDQVVILIGHYASGLDIKRDLAG----FAKEVHIASR 228 (354)
Q Consensus 160 lAtG~~s~~~~p~~~g~~~--~~~~~~~~~~~~~-----~~~~~~~~v~ViG~G~~g~e~a~~l~~----~g~~v~~~~r 228 (354)
+||| +.|+.|++++... +...........+ .....+++++|||+|.+|+|+|..|++ .|.+|+++.+
T Consensus 138 iATG--s~p~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~ 215 (493)
T 1m6i_A 138 IATG--GTPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFP 215 (493)
T ss_dssp ECCC--EEECCCHHHHTSCHHHHHTEEECCSHHHHHHHHHHHHHCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECS
T ss_pred ECCC--CCCCCCCCcccccccccCceEEEcCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEec
Confidence 9999 7887766544211 0011121111100 001247999999999999999999977 4778999987
Q ss_pred cCC-----------ccccccCCCCC-CeEEecceeEEecC-Cc--EEEccCcEEecCEEEEcccCCCccCcccccCchhh
Q 018550 229 SVA-----------DETHEKQPGYD-NMWLHSMVERANED-GT--VVFRNGRVVSADVIMHCTGLTGTSTTTLFLKPMAL 293 (354)
Q Consensus 229 ~~~-----------~~~~~~l~~~~-~~~~~~~v~~v~~~-~~--v~~~~g~~~~~D~vi~a~G~~~~~p~~~~l~~~~~ 293 (354)
.+. +...+.+++.+ +++.++.|+++..+ +. |++.+|+++++|.||+|+|+. ||+++++..+.
T Consensus 216 ~~~~~~~~l~~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~---pn~~l~~~~gl 292 (493)
T 1m6i_A 216 EKGNMGKILPEYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLE---PNVELAKTGGL 292 (493)
T ss_dssp SSSTTTTTSCHHHHHHHHHHHHTTTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCEE---ECCTTHHHHTC
T ss_pred CcccccccCCHHHHHHHHHHHHhcCCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCCC---ccHHHHHHcCC
Confidence 642 11222334455 88999999999743 32 677889999999999999999 77777654332
Q ss_pred h----------------hceeeeecccch---------------hhHHHHHHHhhhccCCCccccc
Q 018550 294 L----------------LWMTIVLGHCTS---------------TFFRQSWHQAFHLLGYHRRLSL 328 (354)
Q Consensus 294 ~----------------~~~i~a~GD~~~---------------~~~~~~~~~~~~~~~~~~~~~~ 328 (354)
. ..+|||+|||+. ....|+...|.++.+....+..
T Consensus 293 ~~~~~~ggi~Vd~~l~t~~~IyA~GD~a~~~~~~~g~~~~~~~~~A~~qg~~aa~ni~g~~~~~~~ 358 (493)
T 1m6i_A 293 EIDSDFGGFRVNAELQARSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKPYWH 358 (493)
T ss_dssp CBCTTTCSEECCTTCEEETTEEECGGGEEEEETTTEEECCCCHHHHHHHHHHHHHHHTSCCCCCCC
T ss_pred ccccCCCcEEECCCcccCCCeeEeeeeEeccCcccCccccchHHHHHHHHHHHHHHhcCCCCCcCC
Confidence 1 135999999985 3456777778888776544433
No 82
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.94 E-value=1.6e-27 Score=219.04 Aligned_cols=232 Identities=20% Similarity=0.236 Sum_probs=158.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+||||||||+++|..|++.|++|+|||+.+.+||.+.+. ++
T Consensus 122 ~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~g-----------------------------------ip 166 (456)
T 2vdc_G 122 GLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYG-----------------------------------IP 166 (456)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHHT-----------------------------------SC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeeec-----------------------------------CC
Confidence 4789999999999999999999999999999998899887651 11
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEe
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlA 161 (354)
.+.. . .++.++..+.+.+.+++ +++++.|. . .+++.+. .+.||+||+|
T Consensus 167 ~~~~--~--------------~~~~~~~~~~l~~~gv~--~~~~~~v~-------~--~v~~~~~-----~~~~d~vvlA 214 (456)
T 2vdc_G 167 GFKL--E--------------KSVVERRVKLLADAGVI--YHPNFEVG-------R--DASLPEL-----RRKHVAVLVA 214 (456)
T ss_dssp TTTS--C--------------HHHHHHHHHHHHHTTCE--EETTCCBT-------T--TBCHHHH-----HSSCSEEEEC
T ss_pred CccC--C--------------HHHHHHHHHHHHHCCcE--EEeCCEec-------c--EEEhhHh-----HhhCCEEEEe
Confidence 1111 0 56677777888888988 88877652 1 1222222 3579999999
Q ss_pred eCCCCCcccCCCCCCCCCCcceeeccc---------CCC--------CCCCCCCeEEEEccCCCHHHHHHHHhccCC-EE
Q 018550 162 NGHFSVPRLAQVPGIDSWPGKQMHSHN---------YRI--------PNPFQDQVVILIGHYASGLDIKRDLAGFAK-EV 223 (354)
Q Consensus 162 tG~~s~~~~p~~~g~~~~~~~~~~~~~---------~~~--------~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~-~v 223 (354)
||++ .++.+.++|.+. . .+++... +.. .....+++|+|||+|.+|+|+|..+.+.|. +|
T Consensus 215 tG~~-~~~~~~ipG~~~-~-gv~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~V 291 (456)
T 2vdc_G 215 TGVY-KARDIKAPGSGL-G-NIVAALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGATSV 291 (456)
T ss_dssp CCCC-EECCTTCSCCTT-T-TEEEHHHHHHHHHHHHCTTTCSSCCTTCSCCCCSEEEEECSSHHHHHHHHHHHHTTCSEE
T ss_pred cCCC-CCCCCCCCCCcC-C-CcEEHHHHHHHhhhhhcccccccccccccccCCCEEEEECCChhHHHHHHHHHHcCCCEE
Confidence 9942 467778888653 1 1222110 101 122468999999999999999999999986 69
Q ss_pred EEEEecCCc------cccccCCCCC-CeEEecceeEEecCCc---EEEc------------------cC--cEEecCEEE
Q 018550 224 HIASRSVAD------ETHEKQPGYD-NMWLHSMVERANEDGT---VVFR------------------NG--RVVSADVIM 273 (354)
Q Consensus 224 ~~~~r~~~~------~~~~~l~~~~-~~~~~~~v~~v~~~~~---v~~~------------------~g--~~~~~D~vi 273 (354)
++++|++.. ..++.+.+.+ ++++++.++++..++. |++. +| .++++|+||
T Consensus 292 tiv~r~~~~~~p~~~~e~~~~~~~Gv~~~~~~~~~~i~~~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi 371 (456)
T 2vdc_G 292 KCLYRRDRKNMPGSQREVAHAEEEGVEFIWQAAPEGFTGDTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVI 371 (456)
T ss_dssp EEECSSCSTTCSSCHHHHHHHHHTTCEEECCSSSCCEEEEEEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEE
T ss_pred EEEEeCCccCCCCCHHHHHHHHHCCCEEEeCCCceEEeCCCcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEE
Confidence 999997641 1122233334 7777877777764432 2221 23 468999999
Q ss_pred EcccCCCccCccc--ccCchhh-----------------hhceeeeecccch
Q 018550 274 HCTGLTGTSTTTL--FLKPMAL-----------------LLWMTIVLGHCTS 306 (354)
Q Consensus 274 ~a~G~~~~~p~~~--~l~~~~~-----------------~~~~i~a~GD~~~ 306 (354)
+|+|+. |+.. ++...+. ...+|||+|||..
T Consensus 372 ~A~G~~---p~~~~~~l~~~gl~~~~~G~i~vd~~~~~Ts~~~VfA~GD~~~ 420 (456)
T 2vdc_G 372 KALGFE---PEDLPNAFDEPELKVTRWGTLLVDHRTKMTNMDGVFAAGDIVR 420 (456)
T ss_dssp ECSCEE---CCCHHHHHHSTTSCBCTTSSBCCCTTTCBCSSTTEEECGGGGS
T ss_pred ECCCCC---CCcchhhcccCCeeECCCCCEEECCCCCcCCCCCEEEeccccC
Confidence 999999 6543 3332221 1245999999986
No 83
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.93 E-value=4.1e-26 Score=227.31 Aligned_cols=261 Identities=16% Similarity=0.155 Sum_probs=176.3
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhccccccccccC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (354)
++|+||||||||+++|..|++.|++|+|||+++.+||+|.. .. . .+
T Consensus 129 ~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~-~~----------k-------~~---------------- 174 (965)
T 2gag_A 129 TDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLD-TA----------G-------EQ---------------- 174 (965)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGG-SS----------C-------CE----------------
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceecc-CC----------c-------cc----------------
Confidence 68999999999999999999999999999999889888873 10 0 00
Q ss_pred CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHh-CCcceEEeceEEEEEEEeCC--------CcEEEEEee-c-CCceE
Q 018550 83 YPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREF-GVDQVVRLHTEVLNARLVES--------NKWKVKSRK-K-DDVVE 151 (354)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~v~~~~~v~~i~~~~~--------~~~~v~~~~-g-~~~~~ 151 (354)
++... ..++...+.+.+.++ +++ ++.+++|..+...+. +.+.+...+ . .+...
T Consensus 175 i~~~~--------------~~~~~~~~~~~l~~~~~v~--~~~~~~V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~ 238 (965)
T 2gag_A 175 IDGMD--------------SSAWIEQVTSELAEAEETT--HLQRTTVFGSYDANYLIAAQRRTVHLDGPSGPGVSRERIW 238 (965)
T ss_dssp ETTEE--------------HHHHHHHHHHHHHHSTTEE--EESSEEEEEEETTTEEEEEEECSTTCSSCCCTTCCSEEEE
T ss_pred cCCCC--------------HHHHHHHHHHHHhhcCCcE--EEeCCEEEeeecCCceeeeEeecccccccccccCCCCceE
Confidence 00000 144445555555554 676 888889988863210 011111100 0 01124
Q ss_pred EEEeCEEEEeeCCCCCcccCCCCCCCCCCcceeeccc---CCC-CCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEE
Q 018550 152 EETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHN---YRI-PNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIAS 227 (354)
Q Consensus 152 ~~~~d~vIlAtG~~s~~~~p~~~g~~~~~~~~~~~~~---~~~-~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~ 227 (354)
.+.||+||+||| +.++.|+++|.+. ++ +++... +.. .....+++++|||+|++|+|+|..|++.|.+|++++
T Consensus 239 ~i~~d~lVlATG--s~p~~~~ipG~~~-~g-v~~~~~~~~~l~~~~~~~gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~ 314 (965)
T 2gag_A 239 HIRAKQVVLATG--AHERPIVFENNDR-PG-IMLAGAVRSYLNRYGVRAGARIAVATTNDSAYELVRELAATGGVVAVID 314 (965)
T ss_dssp EEEEEEEEECCC--EEECCCCCBTCCS-TT-EEEHHHHHHHHHTTCEESCSSEEEEESSTTHHHHHHHHGGGTCCSEEEE
T ss_pred EEECCEEEECCC--CccCCCCCCCCCC-CC-EEEhHHHHHHHHhcCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEE
Confidence 789999999999 7888888888764 22 222211 111 122356899999999999999999999999999999
Q ss_pred ecCC-ccccccCCCCC-CeEEecceeEEec--CCc---EEEcc-------C--cEEecCEEEEcccCCCccCcccccCch
Q 018550 228 RSVA-DETHEKQPGYD-NMWLHSMVERANE--DGT---VVFRN-------G--RVVSADVIMHCTGLTGTSTTTLFLKPM 291 (354)
Q Consensus 228 r~~~-~~~~~~l~~~~-~~~~~~~v~~v~~--~~~---v~~~~-------g--~~~~~D~vi~a~G~~~~~p~~~~l~~~ 291 (354)
+++. ....+++++.+ +++.++.|+++.. ++. |++.+ | +++++|.|++|+|++ ||++++...
T Consensus 315 ~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~---P~~~l~~~~ 391 (965)
T 2gag_A 315 ARSSISAAAAQAVADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFN---PVVHLHSQR 391 (965)
T ss_dssp SCSSCCHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEE---ECCHHHHHT
T ss_pred CCCccchhHHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCcC---cChHHHHhC
Confidence 8874 11134444455 8999999999986 442 66654 4 679999999999999 877776432
Q ss_pred h---------------hhhceeeeecccchh-----hHHHHHHHhhhcc
Q 018550 292 A---------------LLLWMTIVLGHCTST-----FFRQSWHQAFHLL 320 (354)
Q Consensus 292 ~---------------~~~~~i~a~GD~~~~-----~~~~~~~~~~~~~ 320 (354)
+ ....+|||+|||+.. ...++...|.++.
T Consensus 392 ~g~i~vd~~~~~~v~~ts~p~IyAaGD~a~~~~l~~A~~~G~~aA~~i~ 440 (965)
T 2gag_A 392 QGKLDWDTTIHAFVPADAVANQHLAGAMTGRLDTASALSTGAATGAAAA 440 (965)
T ss_dssp TCCEEEETTTTEEEECSCCTTEEECGGGGTCCSHHHHHHHHHHHHHHHH
T ss_pred CCcEEEcCcccccccCCCCCCEEEEEecCCchhHHHHHHHHHHHHHHHH
Confidence 1 123469999999873 2445555555553
No 84
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=99.93 E-value=1.7e-27 Score=221.68 Aligned_cols=220 Identities=14% Similarity=0.232 Sum_probs=140.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
+++|||||||+||+.+|..|++.+++|+|||+++.+ .|..+......+....
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~---------------------------~~~PlL~~va~G~l~~- 93 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYF---------------------------LFTPLLPSAPVGTVDE- 93 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEE---------------------------ECGGGGGGTTTTSSCG-
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCc---------------------------ccccchhHHhhccccH-
Confidence 468999999999999999999999999999997532 1111110000000000
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHH--hCCcceEEeceEEEEEEEeCCCcEEEEEeec-------------
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFARE--FGVDQVVRLHTEVLNARLVESNKWKVKSRKK------------- 146 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g------------- 146 (354)
.++...++..... .+++ + ...+|++|+.+. +..++...++
T Consensus 94 ---------------------~~i~~p~~~~~~~~~~~v~--~-~~~~v~~ID~~~-k~V~l~~~~~~~~~~~~~~~~~~ 148 (502)
T 4g6h_A 94 ---------------------KSIIEPIVNFALKKKGNVT--Y-YEAEATSINPDR-NTVTIKSLSAVSQLYQPENHLGL 148 (502)
T ss_dssp ---------------------GGGEEEHHHHHTTCSSCEE--E-EEEEEEEEEGGG-TEEEEEEEEEEEECSSSCCCCCC
T ss_pred ---------------------HHhhhhHHHHHHhhcCCeE--E-EEEEEEEEEhhh-CEEEEeecccceeeccccccccc
Confidence 1111112222221 2333 3 347889998755 4444433211
Q ss_pred -CCceEEEEeCEEEEeeCCCCCcccCCCCCCCCCCcceeecccC--------------------CCC--CCCCCCeEEEE
Q 018550 147 -DDVVEEETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNY--------------------RIP--NPFQDQVVILI 203 (354)
Q Consensus 147 -~~~~~~~~~d~vIlAtG~~s~~~~p~~~g~~~~~~~~~~~~~~--------------------~~~--~~~~~~~v~Vi 203 (354)
.+...++.||+||+||| +.++.+.+||..+.. +..... ... ......+++||
T Consensus 149 ~~~~~~~i~YD~LViAtG--s~~~~~~ipG~~e~a---~~l~t~~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVv 223 (502)
T 4g6h_A 149 HQAEPAEIKYDYLISAVG--AEPNTFGIPGVTDYG---HFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVV 223 (502)
T ss_dssp CTTCCEEEECSEEEECCC--CEECCTTCTTHHHHC---EECSSHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEE
T ss_pred ccCCceEEeCCEEEEcCC--cccccCCccCccccc---CCCCCHHHHHHHHHHHHHHHHHHhcccccchhhccccceEEE
Confidence 11235899999999999 899999999976421 111100 000 00123579999
Q ss_pred ccCCCHHHHHHHHhccC--------------CEEEEEEecCC----------ccccccCCCCC-CeEEecceeEEecCCc
Q 018550 204 GHYASGLDIKRDLAGFA--------------KEVHIASRSVA----------DETHEKQPGYD-NMWLHSMVERANEDGT 258 (354)
Q Consensus 204 G~G~~g~e~a~~l~~~g--------------~~v~~~~r~~~----------~~~~~~l~~~~-~~~~~~~v~~v~~~~~ 258 (354)
|+|++|+|+|..|++.+ .+|+++++.+. +...+.|++.+ ++++++.|+++++++
T Consensus 224 GgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~~~- 302 (502)
T 4g6h_A 224 GGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFEKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQ- 302 (502)
T ss_dssp CCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEETTEEEEEECSSE-
T ss_pred CCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccCCCHHHHHHHHHHHHhcceeeecCceEEEEeCCc-
Confidence 99999999999987642 57999999875 12233445555 899999999998776
Q ss_pred EEE----ccC----cEEecCEEEEcccCCC
Q 018550 259 VVF----RNG----RVVSADVIMHCTGLTG 280 (354)
Q Consensus 259 v~~----~~g----~~~~~D~vi~a~G~~~ 280 (354)
+.+ .|| +++++|+||||+|.+|
T Consensus 303 ~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~ 332 (502)
T 4g6h_A 303 LLAKTKHEDGKITEETIPYGTLIWATGNKA 332 (502)
T ss_dssp EEEEEECTTSCEEEEEEECSEEEECCCEEC
T ss_pred eEEEEEecCcccceeeeccCEEEEccCCcC
Confidence 333 454 4699999999999994
No 85
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.92 E-value=1.6e-26 Score=211.02 Aligned_cols=255 Identities=18% Similarity=0.103 Sum_probs=165.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHH---cCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLR---EGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELM 78 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~---~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (354)
+++|+|||||++|+++|..|++ .|.+|+|||+++.++..... . + .. .
T Consensus 1 m~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~----~-----------------~------~~---~ 50 (409)
T 3h8l_A 1 MTKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPAL----P-----------------H------VA---I 50 (409)
T ss_dssp -CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSS----C-----------------C------CC---S
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccch----h-----------------h------cc---c
Confidence 3689999999999999999999 89999999998644211110 0 0 00 0
Q ss_pred cccCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEE
Q 018550 79 GFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAV 158 (354)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~v 158 (354)
+. ....++...+.+.+.+.+++ +..+ +|++++.++ ..+++.++.+...++.||+|
T Consensus 51 ---~~----------------~~~~~~~~~~~~~~~~~gv~--~~~~-~v~~i~~~~---~~V~~~~g~~~~~~~~~d~l 105 (409)
T 3h8l_A 51 ---GV----------------RDVDELKVDLSEALPEKGIQ--FQEG-TVEKIDAKS---SMVYYTKPDGSMAEEEYDYV 105 (409)
T ss_dssp ---SC----------------CCCCCEEEEHHHHTGGGTCE--EEEC-EEEEEETTT---TEEEEECTTSCEEEEECSEE
T ss_pred ---CC----------------cCHHHHHHHHHHHHhhCCeE--EEEe-eEEEEeCCC---CEEEEccCCcccceeeCCEE
Confidence 00 00022233455556667888 7665 888887643 35677766544567999999
Q ss_pred EEeeCCCCCcccCCCCCCCCCCcceeecccCCCCCCC------CCCeEEEEccCC-------------------------
Q 018550 159 VVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPF------QDQVVILIGHYA------------------------- 207 (354)
Q Consensus 159 IlAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~~------~~~~v~ViG~G~------------------------- 207 (354)
|+||| +.++.|.++|.+. ...+.+.+.+.... ..++++|||+|.
T Consensus 106 ViAtG--~~~~~~~ipG~~~---~~~~~~~~~~~~~~~~~l~~~~~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~ 180 (409)
T 3h8l_A 106 IVGIG--AHLATELVKGWDK---YGYSVCEPEFATKLREKLESFQGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEG 180 (409)
T ss_dssp EECCC--CEECGGGSBTHHH---HCEESSSTTHHHHHHHHHHHCCSEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCH
T ss_pred EECCC--CCcCccCCCChhh---cCcCcCCHHHHHHHHHHHHHhcCCeEEEEecccccCCCccccccccccCCCCcccCC
Confidence 99999 7888888888664 22222222111100 125677999992
Q ss_pred CHHHHHHH----HhccC----CEEEEEEecCC---------ccccccCCCCC-CeEEecceeEEecCCcEEEccCcEEec
Q 018550 208 SGLDIKRD----LAGFA----KEVHIASRSVA---------DETHEKQPGYD-NMWLHSMVERANEDGTVVFRNGRVVSA 269 (354)
Q Consensus 208 ~g~e~a~~----l~~~g----~~v~~~~r~~~---------~~~~~~l~~~~-~~~~~~~v~~v~~~~~v~~~~g~~~~~ 269 (354)
.++|+|.. +.+.| .+|+++++.+. +...+.+++.+ +++.++.|++++.++ |++++|+++++
T Consensus 181 ~~~e~a~~~~~~l~~~g~~~~~~v~~~~~~~~l~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~-v~~~~g~~~~~ 259 (409)
T 3h8l_A 181 PVFEMSLMLHGYFKKKGMLDKVHVTVFSPGEYLSDLSPNSRKAVASIYNQLGIKLVHNFKIKEIREHE-IVDEKGNTIPA 259 (409)
T ss_dssp HHHHHHHHHHHHHHTTTCTTTEEEEEECSSSSSTTBCHHHHHHHHHHHHHHTCEEECSCCEEEECSSE-EEETTSCEEEC
T ss_pred HHHHHHHHHHHHHHHcCCCCCeEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEcCCceEEECCCe-EEECCCCEEee
Confidence 36788754 45666 48999998762 11222233444 888899999998877 99999999999
Q ss_pred CEEEEcccCCCccCcccccCch--hh----------------hhceeeeecccchh--------hHHHHHHHhhhccC
Q 018550 270 DVIMHCTGLTGTSTTTLFLKPM--AL----------------LLWMTIVLGHCTST--------FFRQSWHQAFHLLG 321 (354)
Q Consensus 270 D~vi~a~G~~~~~p~~~~l~~~--~~----------------~~~~i~a~GD~~~~--------~~~~~~~~~~~~~~ 321 (354)
|+|++|+|+. |+. ++... .. ...+||++|||+.. ...|+...|.++..
T Consensus 260 D~vi~a~G~~---~~~-~l~~~~~~l~~~~G~i~vd~~~~~~~~~~vfa~GD~~~~~~~~~~~~A~~q~~~aa~~i~~ 333 (409)
T 3h8l_A 260 DITILLPPYT---GNP-ALKNSTPDLVDDGGFIPTDLNMVSIKYDNVYAVGDANSMTVPKLGYLAVMTGRIAAQHLAN 333 (409)
T ss_dssp SEEEEECCEE---CCH-HHHTSCGGGSCTTSCBCBBTTSBBSSCTTEEECGGGBTTCCSCCHHHHHHHHHHHHHHHHH
T ss_pred eEEEECCCCC---ccH-HHHhccccCcCCCCCEEeCcccccCCCCCEEEeehhccCCCCcHHHHHHHHHHHHHHHHHH
Confidence 9999999999 442 22222 11 12349999999951 34555555655533
No 86
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.92 E-value=7.5e-26 Score=208.20 Aligned_cols=235 Identities=19% Similarity=0.248 Sum_probs=156.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHH-c------CCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLR-E------GHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLP 74 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~-~------g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (354)
+++|+||||||+|+++|..|++ . |.+|+|||+.+.+||.|++ ++.|.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~---------gv~p~----------------- 56 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRS---------GVAPD----------------- 56 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHH---------TSCTT-----------------
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCcccc---------ccCCC-----------------
Confidence 4799999999999999999999 7 9999999998888888865 22111
Q ss_pred cccccccCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEE
Q 018550 75 RELMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEET 154 (354)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ 154 (354)
++...++..++.+.+.+.+++ ++.+.++ + .. +++.++ .+.
T Consensus 57 ------------------------~~~~~~~~~~~~~~~~~~~v~--~~~~v~v------~-~~--v~~~~~-----~~~ 96 (456)
T 1lqt_A 57 ------------------------HPKIKSISKQFEKTAEDPRFR--FFGNVVV------G-EH--VQPGEL-----SER 96 (456)
T ss_dssp ------------------------CTGGGGGHHHHHHHHTSTTEE--EEESCCB------T-TT--BCHHHH-----HHH
T ss_pred ------------------------CCCHHHHHHHHHHHHhcCCCE--EEeeEEE------C-CE--EEECCC-----eEe
Confidence 011145666777777666766 6665432 1 21 333332 478
Q ss_pred eCEEEEeeCCCCC-cccCCCCCCCCCCcceeecccC-----------CCCCCCCCCeEEEEccCCCHHHHHHHHhcc---
Q 018550 155 FDAVVVCNGHFSV-PRLAQVPGIDSWPGKQMHSHNY-----------RIPNPFQDQVVILIGHYASGLDIKRDLAGF--- 219 (354)
Q Consensus 155 ~d~vIlAtG~~s~-~~~p~~~g~~~~~~~~~~~~~~-----------~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~--- 219 (354)
||+||+||| +. ++.++++|.+. .+ +++...+ ++.....+++++|||+|++|+|+|..|++.
T Consensus 97 ~d~lViAtG--~~~~~~~~ipG~~~-~g-v~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIG~G~~g~e~A~~L~~~~~~ 172 (456)
T 1lqt_A 97 YDAVIYAVG--AQSDRMLNIPGEDL-PG-SIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDV 172 (456)
T ss_dssp SSEEEECCC--CCEECCCCCTTTTS-TT-EEEHHHHHHHHTTCGGGTTCCCCCCSSEEEEECCSHHHHHHHHHHHSCHHH
T ss_pred CCEEEEeeC--CCCCCCCCCCCCCC-CC-cEEHHHHHhhhhcCcccccchhhcCCCEEEEECCCHHHHHHHHHHHhhhhh
Confidence 999999999 55 67778888762 22 3332211 222234689999999999999999999874
Q ss_pred -----------------C-CEEEEEEecCCcc------------------------cc-------------------cc-
Q 018550 220 -----------------A-KEVHIASRSVADE------------------------TH-------------------EK- 237 (354)
Q Consensus 220 -----------------g-~~v~~~~r~~~~~------------------------~~-------------------~~- 237 (354)
+ ++|+++.|+++.. .+ +.
T Consensus 173 l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~f~~~elrel~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 252 (456)
T 1lqt_A 173 LARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRELADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVL 252 (456)
T ss_dssp HTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGCCCCHHHHHHGGGCTTEEEECCGGGGTTCCHHHHHHHCHHHHHHHHHH
T ss_pred hcCCCccHHHHHHHHHCCCcEEEEEecCChhhhccChHHHHHhhcCCCceeeeChHHhccchhhhhhhccHHHHHHHHHH
Confidence 4 5899999976410 00 01
Q ss_pred ---CCC------CC-CeEEecceeEEecCCc---EEEc----------------cC--cEEecCEEEEcccCCCcc-Ccc
Q 018550 238 ---QPG------YD-NMWLHSMVERANEDGT---VVFR----------------NG--RVVSADVIMHCTGLTGTS-TTT 285 (354)
Q Consensus 238 ---l~~------~~-~~~~~~~v~~v~~~~~---v~~~----------------~g--~~~~~D~vi~a~G~~~~~-p~~ 285 (354)
+.+ .+ ++++++.+.++..++. |++. +| ++++||+||+|+|++|+. +..
T Consensus 253 ~~~~~~~~~~~~~gv~i~~~~~~~~i~~~~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~~l~gl 332 (456)
T 1lqt_A 253 RGYADREPRPGHRRMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVPTPGL 332 (456)
T ss_dssp HHHHTCC-CTTSEEEEEECSEEEEEEECSSSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEECCCCTTS
T ss_pred HHHhhcCCCCCCceEEEEeCCCCeEEecCCcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEccccccCCCCCC
Confidence 122 23 6788888888876543 5554 34 468999999999999432 011
Q ss_pred cccCchh---------hhhceeeeecccch
Q 018550 286 LFLKPMA---------LLLWMTIVLGHCTS 306 (354)
Q Consensus 286 ~~l~~~~---------~~~~~i~a~GD~~~ 306 (354)
++-.... ....+|||+|||..
T Consensus 333 ~~d~~g~i~vn~~~rvt~~pgvya~GD~~~ 362 (456)
T 1lqt_A 333 PFDDQSGTIPNVGGRINGSPNEYVVGWIKR 362 (456)
T ss_dssp CCBTTTTBCCEETTEETTCSSEEECTHHHH
T ss_pred cccCCCCeeECCCCcCCCCCCEEEEeccCC
Confidence 1111100 11356999999985
No 87
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.92 E-value=8e-26 Score=207.87 Aligned_cols=243 Identities=12% Similarity=0.181 Sum_probs=157.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHH---cCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLR---EGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELM 78 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~---~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (354)
+++|+|||||++|+++|..|++ .|++|+|||+++.+. + .........
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~----~-----------------------~~~~~~~~~--- 53 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQ----F-----------------------VPSNPWVGV--- 53 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEE----C-----------------------GGGHHHHHH---
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCc----c-----------------------cCCcccccc---
Confidence 4799999999999999999999 899999999976321 1 000000000
Q ss_pred cccCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEE
Q 018550 79 GFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAV 158 (354)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~v 158 (354)
. .....++...+.+.+.+.+++ +. ..+|+.++.++ .++++.++. ++.||+|
T Consensus 54 -----g--------------~~~~~~~~~~l~~~~~~~gv~--~~-~~~v~~id~~~---~~V~~~~g~----~i~~d~l 104 (437)
T 3sx6_A 54 -----G--------------WKERDDIAFPIRHYVERKGIH--FI-AQSAEQIDAEA---QNITLADGN----TVHYDYL 104 (437)
T ss_dssp -----T--------------SSCHHHHEEECHHHHHTTTCE--EE-CSCEEEEETTT---TEEEETTSC----EEECSEE
T ss_pred -----C--------------ccCHHHHHHHHHHHHHHCCCE--EE-EeEEEEEEcCC---CEEEECCCC----EEECCEE
Confidence 0 001145555566677777888 65 57899987643 367777664 7999999
Q ss_pred EEeeCCCCCcccCCCCCCCCCCcceeecccCCCCCC--------CCCCeEEEEccCCCH------HHHH----HHHhccC
Q 018550 159 VVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNP--------FQDQVVILIGHYASG------LDIK----RDLAGFA 220 (354)
Q Consensus 159 IlAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~--------~~~~~v~ViG~G~~g------~e~a----~~l~~~g 220 (354)
|+||| +.++.|.++|.....+.....+...+... ..+++++|||+|+.| +|+| ..+.+.|
T Consensus 105 viAtG--~~~~~~~ipG~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g 182 (437)
T 3sx6_A 105 MIATG--PKLAFENVPGSDPHEGPVQSICTVDHAERAFAEYQALLREPGPIVIGAMAGASCFGPAYEYAMIVASDLKKRG 182 (437)
T ss_dssp EECCC--CEECGGGSTTCSTTTSSEECCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTT
T ss_pred EECCC--CCcCcccCCCCCcccCcceecccccHHHHHHHHHHHHHhCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcC
Confidence 99999 78888889998754233332222211100 013457899986554 8888 4455666
Q ss_pred CE-----EEEEEecCCc-------------cccccCCCCC-CeEEecceeEEecCCcEEEcc---------CcEEecCEE
Q 018550 221 KE-----VHIASRSVAD-------------ETHEKQPGYD-NMWLHSMVERANEDGTVVFRN---------GRVVSADVI 272 (354)
Q Consensus 221 ~~-----v~~~~r~~~~-------------~~~~~l~~~~-~~~~~~~v~~v~~~~~v~~~~---------g~~~~~D~v 272 (354)
.+ |+++++.+.- ...+.+++.+ +++.++.|++++.++ +++++ ++++++|++
T Consensus 183 ~~~~~~~Vtlv~~~~~~~~~~l~~~~~~~~~~~~~l~~~gI~~~~~~~v~~v~~~~-v~~~~~~~~g~~~~~~~i~~D~v 261 (437)
T 3sx6_A 183 MRDKIPSFTFITSEPYIGHLGIQGVGDSKGILTKGLKEEGIEAYTNCKVTKVEDNK-MYVTQVDEKGETIKEMVLPVKFG 261 (437)
T ss_dssp CGGGCSCEEEEESSSSTTCTTTTCCTTHHHHHHHHHHHTTCEEECSEEEEEEETTE-EEEEEECTTSCEEEEEEEECSEE
T ss_pred CcccCcEEEEEcCCccccccccCcchHHHHHHHHHHHHCCCEEEcCCEEEEEECCe-EEEEecccCCccccceEEEEeEE
Confidence 54 9999987631 1112233444 889999999998776 65554 567899999
Q ss_pred EEcccCCCccCccc---ccCchh---------h-hhceeeeecccch
Q 018550 273 MHCTGLTGTSTTTL---FLKPMA---------L-LLWMTIVLGHCTS 306 (354)
Q Consensus 273 i~a~G~~~~~p~~~---~l~~~~---------~-~~~~i~a~GD~~~ 306 (354)
++++|+.+..++.+ +..+.+ . ...+|||+|||+.
T Consensus 262 v~~~g~~~~~~~~~~~gl~~~~G~i~Vd~~l~t~~~~~Ifa~GD~~~ 308 (437)
T 3sx6_A 262 MMIPAFKGVPAVAGVEGLCNPGGFVLVDEHQRSKKYANIFAAGIAIA 308 (437)
T ss_dssp EEECCEECCHHHHTSTTTBCTTSCBCBCTTSBBSSCTTEEECGGGBC
T ss_pred EEcCCCcCchhhhccccccCCCCcEEeChhccCCCCCCEEEEEEEec
Confidence 99999884323222 111111 0 1245999999986
No 88
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.91 E-value=4.8e-25 Score=203.08 Aligned_cols=160 Identities=24% Similarity=0.351 Sum_probs=113.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcC--CcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREG--HTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMG 79 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g--~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (354)
+++|+|||||++|+.+|..|++.| .+|+|||+.+.++|.|.+ ++.|.
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~---------g~~p~---------------------- 54 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRF---------GVAPD---------------------- 54 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHH---------TSCTT----------------------
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeec---------ccCCC----------------------
Confidence 478999999999999999999998 999999998888877765 11111
Q ss_pred ccCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEE
Q 018550 80 FQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVV 159 (354)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vI 159 (354)
++...++..++.+.+++.+++ ++.++.+. . .+++.+. .+.||+||
T Consensus 55 -------------------~~~~~~~~~~~~~~~~~~gv~--~~~~~~v~-------~--~V~~~~~-----~~~~d~lV 99 (460)
T 1cjc_A 55 -------------------HPEVKNVINTFTQTARSDRCA--FYGNVEVG-------R--DVTVQEL-----QDAYHAVV 99 (460)
T ss_dssp -------------------CGGGGGHHHHHHHHHTSTTEE--EEBSCCBT-------T--TBCHHHH-----HHHSSEEE
T ss_pred -------------------CccHHHHHHHHHHHHHhCCcE--EEeeeEEe-------e--EEEeccc-----eEEcCEEE
Confidence 111145667777777777777 77766551 1 1222221 46899999
Q ss_pred EeeCCCCCc-ccCCCCCCCCCCcceeecccC----------CCCC-CCCCCeEEEEccCCCHHHHHHHHh----------
Q 018550 160 VCNGHFSVP-RLAQVPGIDSWPGKQMHSHNY----------RIPN-PFQDQVVILIGHYASGLDIKRDLA---------- 217 (354)
Q Consensus 160 lAtG~~s~~-~~p~~~g~~~~~~~~~~~~~~----------~~~~-~~~~~~v~ViG~G~~g~e~a~~l~---------- 217 (354)
+||| +.+ +.|+++|.+. . .+++...+ .... ...+++++|||+|++|+|+|..|+
T Consensus 100 lAtG--s~~~~~~~ipG~~~-~-gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~td 175 (460)
T 1cjc_A 100 LSYG--AEDHQALDIPGEEL-P-GVFSARAFVGWYNGLPENRELAPDLSCDTAVILGQGNVALDVARILLTPPDHLEKTD 175 (460)
T ss_dssp ECCC--CCEECCCCCTTTTS-T-TEEEHHHHHHHHTTCGGGTTCCCCTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSC
T ss_pred EecC--cCCCCCCCCCCCCC-C-cEEEHHHHHHHhhcCccccccccCCCCCEEEEECCCHHHHHHHHHHhhchhhhcccc
Confidence 9999 664 7788888753 1 22332221 1111 236799999999999999999998
Q ss_pred ----------ccCC-EEEEEEecCC
Q 018550 218 ----------GFAK-EVHIASRSVA 231 (354)
Q Consensus 218 ----------~~g~-~v~~~~r~~~ 231 (354)
+.+. +|+++.|+++
T Consensus 176 i~~~a~~~l~~~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 176 ITEAALGALRQSRVKTVWIVGRRGP 200 (460)
T ss_dssp CCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred ccHHHHHHHhhCCCcEEEEEEcCCh
Confidence 4565 7999998764
No 89
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.89 E-value=8.4e-24 Score=196.94 Aligned_cols=236 Identities=18% Similarity=0.146 Sum_probs=157.3
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhccccccccccC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (354)
++|+|||||++|+++|..|++. ++|+|||+++.+|+.+..... ..+ +
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~-----------------------------~~~---g 155 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGI-----------------------------KQE---G 155 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCS-----------------------------EET---T
T ss_pred CCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeecccc-----------------------------ccC---C
Confidence 5899999999999999999999 999999999888887765200 000 0
Q ss_pred CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEee
Q 018550 83 YPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCN 162 (354)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlAt 162 (354)
++. . ..++...+.+.+ ..+++ ++++++|.++..++ +.+.+...+. +....+.||+||+||
T Consensus 156 ~~~-~--------------~~~~~~~l~~~l-~~~v~--~~~~~~v~~i~~~~-~~~~~~~~~~-~~~~~~~~d~lvlAt 215 (493)
T 1y56_A 156 FNK-D--------------SRKVVEELVGKL-NENTK--IYLETSALGVFDKG-EYFLVPVVRG-DKLIEILAKRVVLAT 215 (493)
T ss_dssp TTE-E--------------HHHHHHHHHHTC-CTTEE--EETTEEECCCEECS-SSEEEEEEET-TEEEEEEESCEEECC
T ss_pred CCC-C--------------HHHHHHHHHHHH-hcCCE--EEcCCEEEEEEcCC-cEEEEEEecC-CeEEEEECCEEEECC
Confidence 100 0 134444433333 33555 78899999998766 5565554332 223478999999999
Q ss_pred CCCCCcccCCCCCCCCCCcceeecccCC----CCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCCccccccC
Q 018550 163 GHFSVPRLAQVPGIDSWPGKQMHSHNYR----IPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVADETHEKQ 238 (354)
Q Consensus 163 G~~s~~~~p~~~g~~~~~~~~~~~~~~~----~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~~~~l 238 (354)
| +.++.|+++|.+. ++ ++...... ......+++++|||+|.+|+| ..+.+.|
T Consensus 216 G--a~~~~~~~~g~~~-~g-v~~~~~~~~~~~~~~~~~~~~vvViGgG~~gle--~~l~~~G------------------ 271 (493)
T 1y56_A 216 G--AIDSTMLFENNDM-PG-VFRRDFALEVMNVWEVAPGRKVAVTGSKADEVI--QELERWG------------------ 271 (493)
T ss_dssp C--EEECCCCCTTTTS-TT-EEEHHHHHHHHHTSCBCSCSEEEEESTTHHHHH--HHHHHHT------------------
T ss_pred C--CCccCCCCCCCCC-CC-EEEcHHHHHHHHhcccCCCCEEEEECCCHHHHH--HHHHhCC------------------
Confidence 9 7888888888754 21 22221110 011235689999999999999 2222222
Q ss_pred CCCCCeEEecceeEEecCCc---EEEccCcEEecCEEEEcccCCCccCcccccCchhh------------------hhce
Q 018550 239 PGYDNMWLHSMVERANEDGT---VVFRNGRVVSADVIMHCTGLTGTSTTTLFLKPMAL------------------LLWM 297 (354)
Q Consensus 239 ~~~~~~~~~~~v~~v~~~~~---v~~~~g~~~~~D~vi~a~G~~~~~p~~~~l~~~~~------------------~~~~ 297 (354)
.+++.++.|+++..++. +++.+|+++++|.|++|+|+. |++++++..+. ...+
T Consensus 272 ---V~v~~~~~v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a~G~~---p~~~l~~~~g~~~~~~~~g~i~~vd~~~~s~~~ 345 (493)
T 1y56_A 272 ---IDYVHIPNVKRVEGNEKVERVIDMNNHEYKVDALIFADGRR---PDINPITQAGGKLRFRRGYYSPVLDEYHRIKDG 345 (493)
T ss_dssp ---CEEEECSSEEEEECSSSCCEEEETTCCEEECSEEEECCCEE---ECCHHHHHTTCCEEEETTEEEECCCTTSEEETT
T ss_pred ---cEEEeCCeeEEEecCCceEEEEeCCCeEEEeCEEEECCCcC---cCchHHHhcCCCccccCCceeeccccccCcCCC
Confidence 25666777888775543 667788899999999999999 77766544322 1235
Q ss_pred eeeecccchh-----hHHHHHHHhhhccC
Q 018550 298 TIVLGHCTST-----FFRQSWHQAFHLLG 321 (354)
Q Consensus 298 i~a~GD~~~~-----~~~~~~~~~~~~~~ 321 (354)
||++|||... ...++...|.++.+
T Consensus 346 vya~GD~~~~~~~~~A~~~g~~aa~~i~~ 374 (493)
T 1y56_A 346 IYVAGSAVSIKPHYANYLEGKLVGAYILK 374 (493)
T ss_dssp EEECSTTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEeccCCccCHHHHHHHHHHHHHHHHH
Confidence 9999999873 34555555555543
No 90
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.89 E-value=4.3e-24 Score=214.21 Aligned_cols=250 Identities=17% Similarity=0.210 Sum_probs=162.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCC-cEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGH-TVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGF 80 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~-~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (354)
.++|+||||||||+++|..|++.|+ +|+|||+.+.+||.+.+. +
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~~-----------------------------------i 231 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSE-----------------------------------I 231 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHHHT-----------------------------------S
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCcccccc-----------------------------------C
Confidence 3689999999999999999999999 799999988888887541 0
Q ss_pred cCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEE
Q 018550 81 QAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVV 160 (354)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIl 160 (354)
+.+.. . .++.++..+.+.+.+++ ++.++.+.. ..+++.++ .++.||+||+
T Consensus 232 p~~~~--~--------------~~~~~~~~~~~~~~gv~--~~~~~~v~~--------~~v~~~~~----~~~~~d~vvl 281 (1025)
T 1gte_A 232 PQFRL--P--------------YDVVNFEIELMKDLGVK--IICGKSLSE--------NEITLNTL----KEEGYKAAFI 281 (1025)
T ss_dssp CTTTS--C--------------HHHHHHHHHHHHTTTCE--EEESCCBST--------TSBCHHHH----HHTTCCEEEE
T ss_pred CcccC--C--------------HHHHHHHHHHHHHCCcE--EEcccEecc--------ceEEhhhc----CccCCCEEEE
Confidence 01111 0 45566667777778888 887766521 12333332 1468999999
Q ss_pred eeCCCCCcccCCC-CCCCCCCcceeecccC--------------CCC-CCCCCCeEEEEccCCCHHHHHHHHhccCC-EE
Q 018550 161 CNGHFSVPRLAQV-PGIDSWPGKQMHSHNY--------------RIP-NPFQDQVVILIGHYASGLDIKRDLAGFAK-EV 223 (354)
Q Consensus 161 AtG~~s~~~~p~~-~g~~~~~~~~~~~~~~--------------~~~-~~~~~~~v~ViG~G~~g~e~a~~l~~~g~-~v 223 (354)
|||+ ..|+.+++ +|..... .+++..++ .+. ....+++|+|||||.+|+|+|..+.+.|. +|
T Consensus 282 AtGa-~~p~~l~~~~G~~~~~-gv~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~VvVIGgG~~g~e~A~~~~~~G~~~V 359 (1025)
T 1gte_A 282 GIGL-PEPKTDDIFQGLTQDQ-GFYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSALRCGARRV 359 (1025)
T ss_dssp CCCC-CEECCCGGGTTCCTTT-TEEEHHHHHHHHHHHHCBTTBSCCCCCCCCCSEEEEECSSHHHHHHHHHHHHTTCSEE
T ss_pred ecCC-CCCCCCCCCCCCCCCC-CEEEhHHHHHHHHhhcccccccccccccccCCcEEEECCChHHHHHHHHHHHcCCCEE
Confidence 9993 14765543 3443211 22321111 111 12246799999999999999999999995 89
Q ss_pred EEEEecCC------ccccccCCCCC-CeEEecceeEEec-CCc---EEEc------cC---------cEEecCEEEEccc
Q 018550 224 HIASRSVA------DETHEKQPGYD-NMWLHSMVERANE-DGT---VVFR------NG---------RVVSADVIMHCTG 277 (354)
Q Consensus 224 ~~~~r~~~------~~~~~~l~~~~-~~~~~~~v~~v~~-~~~---v~~~------~g---------~~~~~D~vi~a~G 277 (354)
++++|++. +..++.+.+.+ +++....++++.. ++. |++. +| .++++|+||+|+|
T Consensus 360 tvv~r~~~~~~~~~~~e~~~~~~~Gv~~~~~~~~~~i~~~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G 439 (1025)
T 1gte_A 360 FLVFRKGFVNIRAVPEEVELAKEEKCEFLPFLSPRKVIVKGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFG 439 (1025)
T ss_dssp EEECSSCGGGCCSCHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSC
T ss_pred EEEEecChhhCCCCHHHHHHHHHcCCEEEeCCCceEEEccCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCC
Confidence 99999863 22223333344 7777777777763 332 2222 22 3689999999999
Q ss_pred CCCccCcccccCch--------h----------hhhceeeeecccchh------hHHHHHHHhhhcc
Q 018550 278 LTGTSTTTLFLKPM--------A----------LLLWMTIVLGHCTST------FFRQSWHQAFHLL 320 (354)
Q Consensus 278 ~~~~~p~~~~l~~~--------~----------~~~~~i~a~GD~~~~------~~~~~~~~~~~~~ 320 (354)
+.+ |+..++.+. + ....+|||+|||+.. +..++..+|.++.
T Consensus 440 ~~~--~~~~l~~~~~gl~~~~~G~I~vd~~~~~Ts~~~VfA~GD~~~~~~~~~~A~~~G~~aA~~i~ 504 (1025)
T 1gte_A 440 SVL--RDPKVKEALSPIKFNRWDLPEVDPETMQTSEPWVFAGGDIVGMANTTVESVNDGKQASWYIH 504 (1025)
T ss_dssp EEC--CCHHHHHHTTTSCBCTTSSBCCCTTTCBCSSTTEEECSGGGCSCCCHHHHHHHHHHHHHHHH
T ss_pred CCC--CchhhhhcccCceECCCCCEEECCCCCccCCCCEEEeCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 983 233333210 0 112459999999872 3456666666664
No 91
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.87 E-value=7.8e-24 Score=194.29 Aligned_cols=240 Identities=13% Similarity=0.152 Sum_probs=145.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHHH--cCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhccccccc
Q 018550 1 MFRHVAVIGAGAAGLVVGHELLR--EGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELM 78 (354)
Q Consensus 1 ~~~~vvIIG~G~aG~~~a~~l~~--~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (354)
|+++|+|||||++|+++|..|++ .|++|+|||+++.++..... .. ......
T Consensus 1 M~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~-----------------------~~----~~~g~~ 53 (430)
T 3h28_A 1 MAKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAF-----------------------PH----LAMGWR 53 (430)
T ss_dssp -CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGH-----------------------HH----HHHTCS
T ss_pred CCCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCc-----------------------ch----hccCcc
Confidence 67899999999999999999999 78999999998654322111 00 000000
Q ss_pred cccCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEE
Q 018550 79 GFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAV 158 (354)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~v 158 (354)
.. .++...+.+.+++.+++ +.. .+++.++.+. ..+.+.++. ++.||+|
T Consensus 54 ~~----------------------~~~~~~~~~~~~~~gv~--~~~-~~v~~id~~~---~~v~~~~g~----~i~~d~l 101 (430)
T 3h28_A 54 KF----------------------EDISVPLAPLLPKFNIE--FIN-EKAESIDPDA---NTVTTQSGK----KIEYDYL 101 (430)
T ss_dssp CG----------------------GGSEEESTTTGGGGTEE--EEC-SCEEEEETTT---TEEEETTCC----EEECSEE
T ss_pred CH----------------------HHHHHHHHHHHHhcCCE--EEE-EEEEEEECCC---CEEEECCCc----EEECCEE
Confidence 00 11111222233446776 655 5888887543 366666654 7999999
Q ss_pred EEeeCCCCCcccCCCCCCCCCCcceeecccCCCCC--------CCCCCeEEEEccCCCH------HHHHHHH----hccC
Q 018550 159 VVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPN--------PFQDQVVILIGHYASG------LDIKRDL----AGFA 220 (354)
Q Consensus 159 IlAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~--------~~~~~~v~ViG~G~~g------~e~a~~l----~~~g 220 (354)
|+||| +.+..|. ... .+.....+...+.. ...+++++|||+|++| +|+|..+ .+.|
T Consensus 102 iiAtG--~~~~~pg---~~~-~g~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g 175 (430)
T 3h28_A 102 VIATG--PKLVFGA---EGQ-EENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRG 175 (430)
T ss_dssp EECCC--CEEECCS---BTH-HHHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTT
T ss_pred EEcCC--cccccCC---CCC-cCCccCcCCHHHHHHHHHHHHHHHhcCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcC
Confidence 99999 7766653 221 01111111110000 0013457889987654 8888544 4555
Q ss_pred ----CEEEEEEecCCc-------------cccccCCCCC-CeEEecceeEEecCCcEEEcc----CcEEecCEEEEcccC
Q 018550 221 ----KEVHIASRSVAD-------------ETHEKQPGYD-NMWLHSMVERANEDGTVVFRN----GRVVSADVIMHCTGL 278 (354)
Q Consensus 221 ----~~v~~~~r~~~~-------------~~~~~l~~~~-~~~~~~~v~~v~~~~~v~~~~----g~~~~~D~vi~a~G~ 278 (354)
.+|+++.+.+.. ...+.+++.+ +++.++.|++++.++ +++++ ++++++|+|++|+|+
T Consensus 176 ~~~~~~V~~v~~~~~~~~~~l~~~~~~~~~l~~~l~~~GV~i~~~~~v~~v~~~~-v~~~~~~~~g~~i~~D~vv~a~G~ 254 (430)
T 3h28_A 176 IRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAVKAIEPDK-VIYEDLNGNTHEVPAKFTMFMPSF 254 (430)
T ss_dssp CGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEECSCEEEEECSSE-EEEECTTSCEEEEECSEEEEECEE
T ss_pred CccceEEEEecCCccccccccCcchHHHHHHHHHHHHCCCEEEeCCEEEEEeCCe-EEEEecCCCceEEeeeEEEECCCC
Confidence 479999887631 1122334444 889999999998776 77777 688999999999999
Q ss_pred CCccCcc----cccCchh--h---------hhceeeeecccch
Q 018550 279 TGTSTTT----LFLKPMA--L---------LLWMTIVLGHCTS 306 (354)
Q Consensus 279 ~~~~p~~----~~l~~~~--~---------~~~~i~a~GD~~~ 306 (354)
.++.+.. .+..+.+ . ...+|||+|||+.
T Consensus 255 ~~~~~l~~~~~gl~~~~G~~i~Vd~~l~t~~~~~Ifa~GD~~~ 297 (430)
T 3h28_A 255 QGPEVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTA 297 (430)
T ss_dssp ECCHHHHTTCTTTBCTTTCCBCCCTTSBCSSSTTEEECSTTBC
T ss_pred ccchhHhhccccCcCCCCCEEecCccccCCCCCCEEEEEeeec
Confidence 8431111 1111122 1 1245999999986
No 92
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.87 E-value=9.5e-22 Score=178.93 Aligned_cols=253 Identities=18% Similarity=0.093 Sum_probs=151.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcC--CcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREG--HTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMG 79 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g--~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (354)
.|+|||||||+||+++|..|++.+ .+|+|||+++........ + ........
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~----------------------~-----~v~~g~~~ 54 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMS----------------------N-----EVIGGDRE 54 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTH----------------------H-----HHHHTSSC
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCH----------------------H-----HHhcCCCC
Confidence 489999999999999999999876 589999987542111000 0 00000000
Q ss_pred ccCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEE
Q 018550 80 FQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVV 159 (354)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vI 159 (354)
. +++...+. .+...+++ +. ..+|+.|+.+ ..++.+.++. ++.||+||
T Consensus 55 ~----------------------~~~~~~~~-~~~~~gv~--~i-~~~v~~id~~---~~~v~~~~g~----~i~yd~Lv 101 (401)
T 3vrd_B 55 L----------------------ASLRVGYD-GLRAHGIQ--VV-HDSALGIDPD---KKLVKTAGGA----EFAYDRCV 101 (401)
T ss_dssp G----------------------GGGEECSH-HHHHTTCE--EE-CSCEEEEETT---TTEEEETTSC----EEECSEEE
T ss_pred H----------------------HHHhhCHH-HHHHCCCE--EE-EeEEEEEEcc---CcEEEecccc----eeecceee
Confidence 0 00000011 12345777 54 4678888764 3466777765 89999999
Q ss_pred EeeCCCCCcccCCCCCCCCCCcc-eeecccCCCC--------CCCCCCeEEEEccCCC-----------HHHHHHHHhcc
Q 018550 160 VCNGHFSVPRLAQVPGIDSWPGK-QMHSHNYRIP--------NPFQDQVVILIGHYAS-----------GLDIKRDLAGF 219 (354)
Q Consensus 160 lAtG~~s~~~~p~~~g~~~~~~~-~~~~~~~~~~--------~~~~~~~v~ViG~G~~-----------g~e~a~~l~~~ 219 (354)
+||| +.++.+.++|..+.... ..+.....+. ........+|+++|.. +++++..+.+.
T Consensus 102 iAtG--~~~~~~~i~G~~e~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~i~~~~a~~e~~~~~a~~~~~~ 179 (401)
T 3vrd_B 102 VAPG--IDLLYDKIEGYSEALAAKLPHAWKAGEQTALLRRQLESMDDGGVVIIAPPAPPFRCPPGPYERASQIAHYLKAH 179 (401)
T ss_dssp ECCC--EEECGGGSBTCCSGGGGTSCCCSSCSHHHHHHHHHHHHSCTTCEEEEECCSSSCBCTTHHHHHHHHHHHHHHHH
T ss_pred eccC--CccccCCccCchhhcccCccceeccHHHHHHHHHHHHhcccCCcEEEecCCccEEeehHHHHHHHHHHHHHHhc
Confidence 9999 88888888887753211 1111111000 0112334455544432 34555555554
Q ss_pred C--CEEEEEEecCC------------ccccccCCCCC-CeEEecceeEEecCC---cEEEccCcEEecCEEEEcccCCCc
Q 018550 220 A--KEVHIASRSVA------------DETHEKQPGYD-NMWLHSMVERANEDG---TVVFRNGRVVSADVIMHCTGLTGT 281 (354)
Q Consensus 220 g--~~v~~~~r~~~------------~~~~~~l~~~~-~~~~~~~v~~v~~~~---~v~~~~g~~~~~D~vi~a~G~~~~ 281 (354)
+ .+|+++.+.+. ......+++.+ +++.++.+..++.+. .+.+.+|+++++|++++++|.+
T Consensus 180 ~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~v~~v~~~~~~~~v~~~~g~~i~~D~vi~~~g~~-- 257 (401)
T 3vrd_B 180 KSKSKVIILDNSQTFSKQAQFTKGWERLYGFGTENALIEWHPGPDAAVVKTDTEAMTVETSFGETFKAAVINLIPPQR-- 257 (401)
T ss_dssp CTTCEEEEECSSSSCTTHHHHHHHHHHHSCTTSTTCSEEEECTTTTCEEEEETTTTEEEETTSCEEECSEEEECCCEE--
T ss_pred CCCCEEEEEcccccccccccccHHHHHHHHHHHHhcCcEEEeCceEEEEEecccceEEEcCCCcEEEeeEEEEecCcC--
Confidence 4 68999988764 11223345555 788888888887443 2888999999999999999998
Q ss_pred cCcccccCchhhh-----------------hceeeeecccchh---------hHHHHHHHhhhcc
Q 018550 282 STTTLFLKPMALL-----------------LWMTIVLGHCTST---------FFRQSWHQAFHLL 320 (354)
Q Consensus 282 ~p~~~~l~~~~~~-----------------~~~i~a~GD~~~~---------~~~~~~~~~~~~~ 320 (354)
|+. ++..++.. ..+|||+|||+.. ...|+...|.++.
T Consensus 258 -~~~-~~~~~gl~~~~G~i~VD~~tl~~t~~p~VfAiGDva~~~~~pk~a~~A~~qa~v~A~ni~ 320 (401)
T 3vrd_B 258 -AGK-IAQSASLTNDSGWCPVDIRTFESSLQPGIHVIGDACNAAPMPKSAYSANSQAKVAAAAVV 320 (401)
T ss_dssp -ECH-HHHHTTCCCTTSSBCBCTTTCBBSSSTTEEECGGGBCCTTSCBSHHHHHHHHHHHHHHHH
T ss_pred -Cch-hHhhccccccCCCEEECCCcceecCCCCEEEecccccCCCCCchHHHHHHHHHHHHHHHH
Confidence 442 22221111 2349999999752 2455555565553
No 93
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.87 E-value=5.4e-24 Score=195.16 Aligned_cols=217 Identities=14% Similarity=0.164 Sum_probs=125.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcC--CcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhccccccc
Q 018550 1 MFRHVAVIGAGAAGLVVGHELLREG--HTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELM 78 (354)
Q Consensus 1 ~~~~vvIIG~G~aG~~~a~~l~~~g--~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (354)
|.|+|||||||+||+++|..|++.+ .+|+|||+++.+.- ..+......+..
T Consensus 1 M~K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~---------------------------~p~l~~v~~g~~ 53 (430)
T 3hyw_A 1 MAKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGF---------------------------TPAFPHLAMGWR 53 (430)
T ss_dssp -CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEEC---------------------------GGGHHHHHHTCS
T ss_pred CCCcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCcc---------------------------CccHHHHhcCCC
Confidence 7889999999999999999999876 79999999764310 000000000000
Q ss_pred cccCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEE
Q 018550 79 GFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAV 158 (354)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~v 158 (354)
.. +++...+++.+++.+++ +.. .+|++|+.+ ..+|++.+|. ++.||+|
T Consensus 54 ~~----------------------~~i~~~~~~~~~~~gv~--~i~-~~v~~Id~~---~~~V~~~~g~----~i~YD~L 101 (430)
T 3hyw_A 54 KF----------------------EDISVPLAPLLPKFNIE--FIN-EKAESIDPD---ANTVTTQSGK----KIEYDYL 101 (430)
T ss_dssp CG----------------------GGSEEESTTTGGGGTEE--EEC-SCEEEEETT---TTEEEETTCC----EEECSEE
T ss_pred CH----------------------HHhhhcHHHHHHHCCcE--EEE-eEEEEEECC---CCEEEECCCC----EEECCEE
Confidence 00 01111112223445666 554 689999864 3467787775 8999999
Q ss_pred EEeeCCCCCcccCCCCCCCCCCcceeecccCC---C-CC-CCCCCeEEEEccCC------CHHHHHHH----HhccC---
Q 018550 159 VVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYR---I-PN-PFQDQVVILIGHYA------SGLDIKRD----LAGFA--- 220 (354)
Q Consensus 159 IlAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~---~-~~-~~~~~~v~ViG~G~------~g~e~a~~----l~~~g--- 220 (354)
|+||| +.+. ++++|..+............ + .. ....+.++|+|++. .+.|++.. +.+.+
T Consensus 102 ViAtG--~~~~-~~i~G~~e~~~~~~~~~~a~~~~~~l~~~~~~~~~vv~gg~~gve~~~~~~e~a~~~~~~l~~~g~~~ 178 (430)
T 3hyw_A 102 VIATG--PKLV-FGAEGQEENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRY 178 (430)
T ss_dssp EECCC--CEEE-CCSBTHHHHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGG
T ss_pred EEeCC--CCcc-CCccCcccCcCCcccHHHHHHHHHHHHhhccCCceEEEeCCCcEEEhHHHHHHHHHHHHHHHHhcccc
Confidence 99999 5543 45777543110000000000 0 00 01234455666553 12233333 33333
Q ss_pred -CEEEEEEecCCc--------c-----ccccCCCCC-CeEEecceeEEecCCcEEEcc--C--cEEecCEEEEcccCCC
Q 018550 221 -KEVHIASRSVAD--------E-----THEKQPGYD-NMWLHSMVERANEDGTVVFRN--G--RVVSADVIMHCTGLTG 280 (354)
Q Consensus 221 -~~v~~~~r~~~~--------~-----~~~~l~~~~-~~~~~~~v~~v~~~~~v~~~~--g--~~~~~D~vi~a~G~~~ 280 (354)
.+|+++...+.. . ..+.+++.+ +++.++.|++++.++ +++++ | +++++|+++|++|.++
T Consensus 179 ~v~v~~~~~~~~l~~~~~~~~~~~~~~l~~~l~~~GV~~~~~~~v~~v~~~~-~~~~~~~g~~~~i~~d~vi~~~G~~~ 256 (430)
T 3hyw_A 179 KVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAVKAIEPDK-VIYEDLNGNTHEVPAKFTMFMPSFQG 256 (430)
T ss_dssp GCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEECSCEEEEECSSE-EEEECTTSCEEEEECSEEEEECEEEC
T ss_pred cceeeeecccchhhhccchhhHHHHHHHHHHHHhCCeEEEeCceEEEEeCCc-eEEEeeCCCceEeecceEEEeccCCC
Confidence 468888765530 0 111223344 899999999998776 65544 3 5799999999999993
No 94
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.61 E-value=2e-16 Score=143.15 Aligned_cols=154 Identities=20% Similarity=0.395 Sum_probs=94.0
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCC--CCCCCCCCCCccccc--ccccchhccccccc
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETES--DPLGVDPNRYPVHSS--LYKSLRVNLPRELM 78 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 78 (354)
+||+|||||++|+++|..|+++|.+|+|+|+++.+|+.+...++... ...++.|.+.+.... ....+....+....
T Consensus 5 ~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 84 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDFI 84 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHHH
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHHH
Confidence 78999999999999999999999999999998877655443221110 001222221111000 00000000000000
Q ss_pred cc---cCCCCCccCCCCCCCCCCCC--CHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEe----CCCcEEEEEeecCCc
Q 018550 79 GF---QAYPFVARNYEGSVDLRRYP--GHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLV----ESNKWKVKSRKKDDV 149 (354)
Q Consensus 79 ~~---~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~----~~~~~~v~~~~g~~~ 149 (354)
.+ .+.++... .....|| ....+.+.+.+.+++.+++ ++++++|+++..+ + +.|.+.+.++
T Consensus 85 ~~~~~~Gi~~~~~-----~~g~~~p~~~~~~l~~~L~~~~~~~Gv~--i~~~~~v~~i~~~~~g~~-~~~~v~~~~g--- 153 (401)
T 2gqf_A 85 SLVAEQGITYHEK-----ELGQLFCDEGAEQIVEMLKSECDKYGAK--ILLRSEVSQVERIQNDEK-VRFVLQVNST--- 153 (401)
T ss_dssp HHHHHTTCCEEEC-----STTEEEETTCTHHHHHHHHHHHHHHTCE--EECSCCEEEEEECCSCSS-CCEEEEETTE---
T ss_pred HHHHhCCCceEEC-----cCCEEccCCCHHHHHHHHHHHHHHCCCE--EEeCCEEEEEEcccCcCC-CeEEEEECCC---
Confidence 00 01111110 1112222 4588889999999999998 9999999999876 4 5687776543
Q ss_pred eEEEEeCEEEEeeCCCCCcc
Q 018550 150 VEEETFDAVVVCNGHFSVPR 169 (354)
Q Consensus 150 ~~~~~~d~vIlAtG~~s~~~ 169 (354)
++.+|.||+|||.++.|.
T Consensus 154 --~i~ad~VVlAtG~~s~p~ 171 (401)
T 2gqf_A 154 --QWQCKNLIVATGGLSMPG 171 (401)
T ss_dssp --EEEESEEEECCCCSSCGG
T ss_pred --EEECCEEEECCCCccCCC
Confidence 689999999999776543
No 95
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.56 E-value=3.5e-17 Score=144.44 Aligned_cols=217 Identities=12% Similarity=0.084 Sum_probs=134.0
Q ss_pred CeEEEEcCChHHHHHHHHHHH--cCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhccccccccc
Q 018550 3 RHVAVIGAGAAGLVVGHELLR--EGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGF 80 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~--~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (354)
+||+||||||||++||+.|++ .|++|+|||+++.+||.+... ++.+.+
T Consensus 66 ~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~--------~~~~~~---------------------- 115 (326)
T 3fpz_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLG--------GQLFSA---------------------- 115 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCC--------STTCCC----------------------
T ss_pred CCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeC--------CccCCH----------------------
Confidence 689999999999999999975 499999999998999887653 111110
Q ss_pred cCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEE
Q 018550 81 QAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVV 160 (354)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIl 160 (354)
..+.......+++++++ +..+.. .....+.+++
T Consensus 116 ----------------------~~l~~~~~~~~~e~Gv~--~~~~~~-----------------------~~~~~~~~~~ 148 (326)
T 3fpz_A 116 ----------------------MVMRKPAHLFLQELEIP--YEDEGD-----------------------YVVVKHAALF 148 (326)
T ss_dssp ----------------------EEEETTTHHHHHHTTCC--CEECSS-----------------------EEEESCHHHH
T ss_pred ----------------------HHHHHHHHHHHHHcCCE--EEECCc-----------------------ceecceeEEE
Confidence 00001112334556776 433210 1334445566
Q ss_pred eeCCCCCcccCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCCccccccCCC
Q 018550 161 CNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVADETHEKQPG 240 (354)
Q Consensus 161 AtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~~~~l~~ 240 (354)
+++ ..++.+.++|...+.+.....+..++.....++++++||+|.++++.|..+...+.++++..+....+....+..
T Consensus 149 ~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viggg~~av~~a~~~~~~~~~v~i~~~~~~~~~~~~~~~ 226 (326)
T 3fpz_A 149 IST--VLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCAMDPNVIELAGYKNDGTRDLSQ 226 (326)
T ss_dssp HHH--HHHHHHTSTTEEEETTEEEEEEEEESSCSSSSCEEEEEEEEEHHHHTCTTSSSCCCCEEEEESCBCTTSSBCTTS
T ss_pred Ecc--hhhhccccccceeecccccceeeccCCcccCCCEEEEEccCceeeehhhhhhhccCcEEEEeeccccccccccee
Confidence 777 677778888877666555555555555666789999999999999999999999999999887664333222222
Q ss_pred CCCeEEecceeEEecC-CcE-EEccCcEEecCEEEEcccCCCccCcccccCc--------hhhhhceeeeecccch
Q 018550 241 YDNMWLHSMVERANED-GTV-VFRNGRVVSADVIMHCTGLTGTSTTTLFLKP--------MALLLWMTIVLGHCTS 306 (354)
Q Consensus 241 ~~~~~~~~~v~~v~~~-~~v-~~~~g~~~~~D~vi~a~G~~~~~p~~~~l~~--------~~~~~~~i~a~GD~~~ 306 (354)
..... ...... +.+ .......+.+|.++.+.|.+ |....+.. ......+||++||++.
T Consensus 227 ~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~---~~~~~~~e~~iv~~~~~~t~vpGv~aaGDaa~ 294 (326)
T 3fpz_A 227 KHGVI-----LSTTGHDGPFGAFCAKRIVDIDQNQKLGGMK---GLDMNHAEHDVVIHSGAYAGVDNMYFAGMEVA 294 (326)
T ss_dssp CCCEE-----EECCCSCSSSCSHHHHHHHHHCTTCCCCCCC---CBCHHHHHHHHHHHCEECTTSBTEEECTHHHH
T ss_pred ecceE-----EEEecceeeEeecceeEEEecCceeeeccee---cccccccCCeEEECCCeEECCCCEEEEchHhc
Confidence 21111 111111 110 00111345678888888888 43221111 1111355999999875
No 96
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.47 E-value=4.2e-14 Score=128.34 Aligned_cols=156 Identities=19% Similarity=0.326 Sum_probs=95.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCC--CCCCCCCCCCccc--ccccccchhcccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETES--DPLGVDPNRYPVH--SSLYKSLRVNLPREL 77 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 77 (354)
.+||+|||||++|+++|..|+++|.+|+|+|+.+.+|+.+...++... ....+.+...+.. ...+..+....+...
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 106 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQDF 106 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHHHH
Confidence 369999999999999999999999999999999888765533221110 0001111110000 000111111111111
Q ss_pred ccc---cCCCCCccCCCCCCCCCCC--CCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEE
Q 018550 78 MGF---QAYPFVARNYEGSVDLRRY--PGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEE 152 (354)
Q Consensus 78 ~~~---~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~ 152 (354)
..+ .+.++... .....| .....+.+.+.+.+.+.+++ ++++++|+++..++ +.+.|.+.++ +
T Consensus 107 ~~~~~~~Gi~~~~~-----~~g~~~~~~~~~~l~~~L~~~l~~~Gv~--i~~~~~V~~i~~~~-~~~~V~~~~g-----~ 173 (417)
T 3v76_A 107 VALVERHGIGWHEK-----TLGQLFCDHSAKDIIRMLMAEMKEAGVQ--LRLETSIGEVERTA-SGFRVTTSAG-----T 173 (417)
T ss_dssp HHHHHHTTCCEEEC-----STTEEEESSCHHHHHHHHHHHHHHHTCE--EECSCCEEEEEEET-TEEEEEETTE-----E
T ss_pred HHHHHHcCCCcEEe-----eCCEEeeCCCHHHHHHHHHHHHHHCCCE--EEECCEEEEEEEeC-CEEEEEECCc-----E
Confidence 110 01111110 011112 23468889999999888998 99999999999877 6788887664 7
Q ss_pred EEeCEEEEeeCCCCCccc
Q 018550 153 ETFDAVVVCNGHFSVPRL 170 (354)
Q Consensus 153 ~~~d~vIlAtG~~s~~~~ 170 (354)
+.+|.||+|+|.++.|..
T Consensus 174 i~ad~VIlAtG~~S~p~~ 191 (417)
T 3v76_A 174 VDAASLVVASGGKSIPKM 191 (417)
T ss_dssp EEESEEEECCCCSSCGGG
T ss_pred EEeeEEEECCCCccCCCC
Confidence 899999999998776543
No 97
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.41 E-value=9.5e-13 Score=118.99 Aligned_cols=155 Identities=15% Similarity=0.152 Sum_probs=89.8
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCC---CCCCCCCCCCCcccccccccchhcccccccc
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETE---SDPLGVDPNRYPVHSSLYKSLRVNLPRELMG 79 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (354)
+||+||||||+|+++|..|+++|++|+||||.+.+|........+. ....+.......+.. .........+.....
T Consensus 5 yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~ 83 (397)
T 3oz2_A 5 YDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIAN-EVKGARIYGPSEKRP 83 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEE-EESEEEEECTTCSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhc-ccceEEEEeCCCceE
Confidence 7999999999999999999999999999999876653221110000 000111111000000 000000011100000
Q ss_pred ccCCCCCccCCCCCCCCC-CCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEE
Q 018550 80 FQAYPFVARNYEGSVDLR-RYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAV 158 (354)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~v 158 (354)
+. +.... ..... ....+..+...+.+.+.+.|++ ++++++++++..++ +..........+...++.+|+|
T Consensus 84 ~~-~~~~~-----~~~~~~~~i~R~~~~~~L~~~a~~~G~~--~~~~~~v~~~~~~~-~~~~~v~~~~~~~~~~~~a~~v 154 (397)
T 3oz2_A 84 II-LQSEK-----AGNEVGYVLERDKFDKHLAALAAKAGAD--VWVKSPALGVIKEN-GKVAGAKIRHNNEIVDVRAKMV 154 (397)
T ss_dssp EE-EECSS-----SSCCCEEEECHHHHHHHHHHHHHHHTCE--EESSCCEEEEEEET-TEEEEEEEEETTEEEEEEEEEE
T ss_pred ee-ccccc-----cCCceeEEEEHHHHHHHHHHHHHhcCcE--Eeeeeeeeeeeecc-ceeeeeeecccccceEEEEeEE
Confidence 00 00000 00011 1246788999999999999998 99999999998876 5444333333344567999999
Q ss_pred EEeeCCCCC
Q 018550 159 VVCNGHFSV 167 (354)
Q Consensus 159 IlAtG~~s~ 167 (354)
|.|+|.+|.
T Consensus 155 IgAdG~~S~ 163 (397)
T 3oz2_A 155 IAADGFESE 163 (397)
T ss_dssp EECCCTTCH
T ss_pred EeCCccccH
Confidence 999997664
No 98
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.39 E-value=1.7e-12 Score=104.07 Aligned_cols=112 Identities=28% Similarity=0.413 Sum_probs=82.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
+++|+|||||++|+.+|..|++.|.+|+++|+.+.. +.... ....++
T Consensus 1 ~~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~---~~~~~------------------------------~~~~~~ 47 (180)
T 2ywl_A 1 MWDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSK---VKGVS------------------------------RVPNYP 47 (180)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCT---TTTCS------------------------------CCCCST
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCc---ccCch------------------------------hhhccC
Confidence 378999999999999999999999999999997522 10000 000001
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEe
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlA 161 (354)
.++. .....++.+++.+.+++.+++ ++++ +|++++.++ +.+.+.+.++ ++++|.||+|
T Consensus 48 ~~~~-------------~~~~~~~~~~l~~~~~~~gv~--v~~~-~v~~i~~~~-~~~~v~~~~g-----~i~ad~vI~A 105 (180)
T 2ywl_A 48 GLLD-------------EPSGEELLRRLEAHARRYGAE--VRPG-VVKGVRDMG-GVFEVETEEG-----VEKAERLLLC 105 (180)
T ss_dssp TCTT-------------CCCHHHHHHHHHHHHHHTTCE--EEEC-CCCEEEECS-SSEEEECSSC-----EEEEEEEEEC
T ss_pred CCcC-------------CCCHHHHHHHHHHHHHHcCCE--EEeC-EEEEEEEcC-CEEEEEECCC-----EEEECEEEEC
Confidence 1100 012378889999999999998 8888 999999876 6687877654 6899999999
Q ss_pred eCCCCCccc
Q 018550 162 NGHFSVPRL 170 (354)
Q Consensus 162 tG~~s~~~~ 170 (354)
+| ..|..
T Consensus 106 ~G--~~~~~ 112 (180)
T 2ywl_A 106 TH--KDPTL 112 (180)
T ss_dssp CT--TCCHH
T ss_pred CC--CCCCc
Confidence 99 55544
No 99
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.37 E-value=1.6e-12 Score=122.32 Aligned_cols=184 Identities=14% Similarity=0.101 Sum_probs=102.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC-CccceeecCCCCCCCCCCCCCCCCcccc-cccccchhcc------
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE-QVGGSWIYTSETESDPLGVDPNRYPVHS-SLYKSLRVNL------ 73 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~------ 73 (354)
.+||+|||||+||+++|..|++.|.+|+|+|+.. .+|. .+|.|....... .....+....
T Consensus 28 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~------------~~Cnps~ggia~~~lv~ei~algg~~~~~ 95 (651)
T 3ces_A 28 PFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQ------------MSCNPAIGGIGKGHLVKEVDALGGLMAKA 95 (651)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC------------CSSSSEEESTTHHHHHHHHHHTTCSHHHH
T ss_pred cCCEEEECChHHHHHHHHHHHhCCCCEEEEeeccccccc------------ccccccccchhhHHHHHHHHHhccHHHHH
Confidence 3699999999999999999999999999999863 2331 123322111100 0011110000
Q ss_pred -ccccccccCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHH-hCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceE
Q 018550 74 -PRELMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFARE-FGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVE 151 (354)
Q Consensus 74 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~ 151 (354)
......+..+....... ........++..+...+.+.+.+ .+++ + ++++|+++..+++..+.|.+.+| .
T Consensus 96 ~d~~gi~f~~l~~~kgpa--v~~~r~~~Dr~~~~~~L~e~Le~~~GV~--I-~~~~V~~L~~e~g~V~GV~t~dG----~ 166 (651)
T 3ces_A 96 IDQAGIQFRILNASKGPA--VRATRAQADRVLYRQAVRTALENQPNLM--I-FQQAVEDLIVENDRVVGAVTQMG----L 166 (651)
T ss_dssp HHHHEEEEEEESTTSCGG--GCEEEEEECHHHHHHHHHHHHHTCTTEE--E-EECCEEEEEESSSBEEEEEETTS----E
T ss_pred hhhcccchhhhhcccCcc--cccchhhCCHHHHHHHHHHHHHhCCCCE--E-EEEEEEEEEecCCEEEEEEECCC----C
Confidence 00000010000000000 00000112346778888888877 5777 6 67899999876523346666655 3
Q ss_pred EEEeCEEEEeeCCCCCcccCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEe
Q 018550 152 EETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASR 228 (354)
Q Consensus 152 ~~~~d~vIlAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r 228 (354)
.+.+|.||+|||. .+..+.++|...+ .+.+ +| |.+|++++..|.+.|.+|+.+..
T Consensus 167 ~I~Ad~VVLATGt--~s~~~~i~G~~~~----------------~~gr---iG-g~~a~eLA~~L~~lG~~v~~~~t 221 (651)
T 3ces_A 167 KFRAKAVVLTVGT--FLDGKIHIGLDNY----------------SGGR---AG-DPPSIPLSRRLRELPLRVGRLKT 221 (651)
T ss_dssp EEEEEEEEECCST--TTCCEEECC---------------------------------CCHHHHHHHTTTCCEEEECC
T ss_pred EEECCEEEEcCCC--CccCccccCcccC----------------CCCC---cc-chhhhHHHHHHHhcCCeEEEecC
Confidence 7999999999995 4444445554431 1122 56 88999999999999999988864
No 100
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.36 E-value=1.5e-12 Score=119.62 Aligned_cols=156 Identities=21% Similarity=0.301 Sum_probs=92.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCC-CCCCCC---Ccc--cccccccchhccc
Q 018550 1 MFRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPL-GVDPNR---YPV--HSSLYKSLRVNLP 74 (354)
Q Consensus 1 ~~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~-~~~~~~---~~~--~~~~~~~~~~~~~ 74 (354)
|.+||+|||||++|+++|..|+++|.+|+|+|+.+.+|+.....++...... ...+.. .+. ....+..+.....
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNN 104 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCH
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCH
Confidence 4579999999999999999999999999999998877754433211110000 000000 000 0000000000000
Q ss_pred cccccc---cCCCCCccCCCCCCCCCCCC---CHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCc-EEEEEeecC
Q 018550 75 RELMGF---QAYPFVARNYEGSVDLRRYP---GHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNK-WKVKSRKKD 147 (354)
Q Consensus 75 ~~~~~~---~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~-~~v~~~~g~ 147 (354)
.....+ .+.++... .....|| ....+.+.+.+.+.+.+++ ++++++|+++..++ +. +.|.+.++.
T Consensus 105 ~~~~~~~~~~G~~~~~~-----~~g~~~p~~~~~~~l~~~L~~~~~~~GV~--i~~~~~V~~i~~~~-~~v~~V~~~~G~ 176 (447)
T 2i0z_A 105 EDIITFFENLGVKLKEE-----DHGRMFPVSNKAQSVVDALLTRLKDLGVK--IRTNTPVETIEYEN-GQTKAVILQTGE 176 (447)
T ss_dssp HHHHHHHHHTTCCEEEC-----GGGEEEETTCCHHHHHHHHHHHHHHTTCE--EECSCCEEEEEEET-TEEEEEEETTCC
T ss_pred HHHHHHHHhcCCceEEe-----eCCEEECCCCCHHHHHHHHHHHHHHCCCE--EEeCcEEEEEEecC-CcEEEEEECCCC
Confidence 000000 01111100 0011122 3478888888888888998 99999999999866 54 788877653
Q ss_pred CceEEEEeCEEEEeeCCCCCc
Q 018550 148 DVVEEETFDAVVVCNGHFSVP 168 (354)
Q Consensus 148 ~~~~~~~~d~vIlAtG~~s~~ 168 (354)
.+.+|.||+|+|.++.|
T Consensus 177 ----~i~Ad~VVlAtGg~s~~ 193 (447)
T 2i0z_A 177 ----VLETNHVVIAVGGKSVP 193 (447)
T ss_dssp ----EEECSCEEECCCCSSSG
T ss_pred ----EEECCEEEECCCCCcCC
Confidence 69999999999987743
No 101
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.36 E-value=1.8e-12 Score=120.71 Aligned_cols=153 Identities=25% Similarity=0.254 Sum_probs=92.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCcccee---ecCCCC-C-CCCCCCCCCCCcccccccccchhccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSW---IYTSET-E-SDPLGVDPNRYPVHSSLYKSLRVNLPRE 76 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~---~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (354)
+++|+||||||+|+++|..|+++|++|+|||+.+.++..- ..+++. . ....++ ++.+....+..
T Consensus 11 ~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl-----------~~~~~~~~~~~ 79 (500)
T 2qa1_A 11 DAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGI-----------LPRFGEVETST 79 (500)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTC-----------GGGGCSCCBCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCC-----------HHHHHhccccc
Confidence 5789999999999999999999999999999976543110 000000 0 000111 11110000000
Q ss_pred cccccCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeC
Q 018550 77 LMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFD 156 (354)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d 156 (354)
...+.+..+...............++..+.+.+.+.+.+.+++ ++++++|++++.++ +.+++++.++++ .+++.+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~--v~~~~~v~~i~~~~-~~v~v~~~~~~g-~~~~~a~ 155 (500)
T 2qa1_A 80 QGHFGGLPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGAD--IRRGHEVLSLTDDG-AGVTVEVRGPEG-KHTLRAA 155 (500)
T ss_dssp EEEETTEEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCE--EEETCEEEEEEEET-TEEEEEEEETTE-EEEEEES
T ss_pred cccccceecccccCCCCCCceeecCHHHHHHHHHHHHHHCCCE--EECCcEEEEEEEcC-CeEEEEEEcCCC-CEEEEeC
Confidence 0000000000000000000001234578889999999888888 99999999999887 778888887654 3579999
Q ss_pred EEEEeeCCCCCcc
Q 018550 157 AVVVCNGHFSVPR 169 (354)
Q Consensus 157 ~vIlAtG~~s~~~ 169 (354)
+||.|+|.+|..+
T Consensus 156 ~vVgADG~~S~VR 168 (500)
T 2qa1_A 156 YLVGCDGGRSSVR 168 (500)
T ss_dssp EEEECCCTTCHHH
T ss_pred EEEECCCcchHHH
Confidence 9999999877544
No 102
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.35 E-value=6.4e-12 Score=116.92 Aligned_cols=156 Identities=22% Similarity=0.150 Sum_probs=92.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCC--Ccccccccccchhcccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNR--YPVHSSLYKSLRVNLPRELMG 79 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 79 (354)
.++|+||||||+|+++|..|+++|++|+|||+.+.++..-.- .++.|.. .+..-..++.+....+.....
T Consensus 12 ~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~--------~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~ 83 (499)
T 2qa2_A 12 DASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRG--------LGFTARTMEVFDQRGILPAFGPVETSTQGH 83 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCS--------EEECHHHHHHHHHTTCGGGGCSCCEESEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCce--------eEECHHHHHHHHHCCCHHHHHhccccccce
Confidence 578999999999999999999999999999997654311000 0000000 000000011110000000000
Q ss_pred ccCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEE
Q 018550 80 FQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVV 159 (354)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vI 159 (354)
+.+..+...............++..+.+.+.+.+.+.+++ ++++++|++++.++ +.+++++.++++ .+++.+|+||
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~--v~~~~~v~~i~~~~-~~v~v~~~~~~g-~~~~~a~~vV 159 (499)
T 2qa2_A 84 FGGRPVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAE--LLRGHTVRALTDEG-DHVVVEVEGPDG-PRSLTTRYVV 159 (499)
T ss_dssp ETTEEEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCE--EEESCEEEEEEECS-SCEEEEEECSSC-EEEEEEEEEE
T ss_pred ecceecccccCCCCCCceEecCHHHHHHHHHHHHHhCCCE--EEcCCEEEEEEEeC-CEEEEEEEcCCC-cEEEEeCEEE
Confidence 0000000000000000001234578899999999888888 99999999999887 778888887654 4679999999
Q ss_pred EeeCCCCCcc
Q 018550 160 VCNGHFSVPR 169 (354)
Q Consensus 160 lAtG~~s~~~ 169 (354)
.|+|.+|..+
T Consensus 160 gADG~~S~VR 169 (499)
T 2qa2_A 160 GCDGGRSTVR 169 (499)
T ss_dssp ECCCTTCHHH
T ss_pred EccCcccHHH
Confidence 9999877544
No 103
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.34 E-value=2.1e-12 Score=116.88 Aligned_cols=155 Identities=17% Similarity=0.177 Sum_probs=91.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCC---CCCCCCCCCCCcccccccccchhccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETE---SDPLGVDPNRYPVHSSLYKSLRVNLPRELM 78 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (354)
++||+|||||++|+++|..|+++|++|+|+|+.+.+|+......... ....+..+..... ...+.......+....
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~-~~~~~~~~~~~~~~~~ 82 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFI-ANEVKGARIYGPSEKR 82 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTE-EEEESEEEEECTTCSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHh-hhhcceEEEEcCCCCE
Confidence 37999999999999999999999999999999876654332211100 0001111110000 0000000000000000
Q ss_pred cccCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEE-EEEeecCCceEEEEeCE
Q 018550 79 GFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWK-VKSRKKDDVVEEETFDA 157 (354)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~-v~~~~g~~~~~~~~~d~ 157 (354)
...++.... .........+..+.+.+.+.+.+.|++ ++++++|+++..++ +.+. |++.+. +...++.+|.
T Consensus 83 -~~~~~~~~~----~~~~~~~~~~~~l~~~L~~~~~~~gv~--i~~~~~v~~i~~~~-~~v~gv~~~~~-~~~~~~~a~~ 153 (397)
T 3cgv_A 83 -PIILQSEKA----GNEVGYVLERDKFDKHLAALAAKAGAD--VWVKSPALGVIKEN-GKVAGAKIRHN-NEIVDVRAKM 153 (397)
T ss_dssp -CEEEC---------CCCEEEECHHHHHHHHHHHHHHHTCE--EESSCCEEEEEEET-TEEEEEEEEET-TEEEEEEEEE
T ss_pred -EEEEecccc----CCceeEEEeHHHHHHHHHHHHHhCCCE--EEECCEEEEEEEeC-CEEEEEEEEEC-CeEEEEEcCE
Confidence 000000000 000111245688899999999888998 99999999999886 6666 776542 1235899999
Q ss_pred EEEeeCCCC
Q 018550 158 VVVCNGHFS 166 (354)
Q Consensus 158 vIlAtG~~s 166 (354)
||.|+|.++
T Consensus 154 vV~A~G~~s 162 (397)
T 3cgv_A 154 VIAADGFES 162 (397)
T ss_dssp EEECCCTTC
T ss_pred EEECCCcch
Confidence 999999766
No 104
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.32 E-value=8.3e-12 Score=104.33 Aligned_cols=125 Identities=15% Similarity=0.070 Sum_probs=82.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||||++|+++|..|++.|.+|+|||+.....| +..++... .. ....+.....
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G-~~~~~~~~-----~~---------~~~~~~~~~~------- 60 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVM-MPFLPPKP-----PF---------PPGSLLERAY------- 60 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTT-CCSSCCCS-----CC---------CTTCHHHHHC-------
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCC-cccCcccc-----cc---------chhhHHhhhc-------
Confidence 47999999999999999999999999999999733223 22111100 00 0000000000
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHh-CCcceEEeceEEEEEEEeCCCc-EEEEEeecCCceEEEEeCEEE
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREF-GVDQVVRLHTEVLNARLVESNK-WKVKSRKKDDVVEEETFDAVV 159 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~v~~~~~v~~i~~~~~~~-~~v~~~~g~~~~~~~~~d~vI 159 (354)
+ . .-|.+..+.+++.+.+++. +++ ++ +++|+++..++ +. +.+.+.++. ++.+|+||
T Consensus 61 d----~----------~g~~~~~~~~~l~~~~~~~~gv~--i~-~~~v~~i~~~~-~~v~~v~~~~g~----~i~a~~VV 118 (232)
T 2cul_A 61 D----P----------KDERVWAFHARAKYLLEGLRPLH--LF-QATATGLLLEG-NRVVGVRTWEGP----PARGEKVV 118 (232)
T ss_dssp C----T----------TCCCHHHHHHHHHHHHHTCTTEE--EE-ECCEEEEEEET-TEEEEEEETTSC----CEECSEEE
T ss_pred c----C----------CCCCHHHHHHHHHHHHHcCCCcE--EE-EeEEEEEEEeC-CEEEEEEECCCC----EEECCEEE
Confidence 0 0 0014478888999888886 777 66 57999998876 44 456666653 78999999
Q ss_pred EeeCCCCCccc
Q 018550 160 VCNGHFSVPRL 170 (354)
Q Consensus 160 lAtG~~s~~~~ 170 (354)
+|+|.++..+.
T Consensus 119 ~A~G~~s~~~~ 129 (232)
T 2cul_A 119 LAVGSFLGARL 129 (232)
T ss_dssp ECCTTCSSCEE
T ss_pred ECCCCChhhce
Confidence 99997655443
No 105
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.32 E-value=2.3e-11 Score=114.50 Aligned_cols=155 Identities=18% Similarity=0.139 Sum_probs=92.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCC--Ccccccccccchhc-------
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNR--YPVHSSLYKSLRVN------- 72 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~------- 72 (354)
.++|+|||||++|+++|..|+++|++|+|||+.+..+..-.. .++.+.. .+..-..++.+...
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~--------~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~ 76 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRA--------AGQNPRTMELLRIGGVADEVVRADDIRGTQ 76 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCS--------CCBCHHHHHHHHHTTCHHHHHHSCCSSCTT
T ss_pred cCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCcc--------ceECHHHHHHHHHcCCHHHHHhhCCCcccc
Confidence 368999999999999999999999999999997654311100 0000000 00000000000000
Q ss_pred -----------cccccccc-cCCCCCccC-CCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCC--
Q 018550 73 -----------LPRELMGF-QAYPFVARN-YEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESN-- 137 (354)
Q Consensus 73 -----------~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~-- 137 (354)
.......+ ..++..... ...........++..+.+.+.+.+.+.|++ ++++++|+++..++ +
T Consensus 77 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~--i~~~~~v~~i~~~~-~~~ 153 (535)
T 3ihg_A 77 GDFVIRLAESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGA--IRFGTRLLSFRQHD-DDA 153 (535)
T ss_dssp SCCEEEEESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCE--EESSCEEEEEEEEC-GGG
T ss_pred cceeeeEEeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCE--EEeCCEEEEEEECC-CCc
Confidence 00000000 000000000 000001122346688999999999988888 99999999999887 6
Q ss_pred --cEEEEEeecCCceEEEEeCEEEEeeCCCCCc
Q 018550 138 --KWKVKSRKKDDVVEEETFDAVVVCNGHFSVP 168 (354)
Q Consensus 138 --~~~v~~~~g~~~~~~~~~d~vIlAtG~~s~~ 168 (354)
.+++++.++.+ ..++.+|+||.|+|.+|.-
T Consensus 154 ~~~v~v~~~~~~~-~~~i~a~~vV~AdG~~S~v 185 (535)
T 3ihg_A 154 GAGVTARLAGPDG-EYDLRAGYLVGADGNRSLV 185 (535)
T ss_dssp CSEEEEEEEETTE-EEEEEEEEEEECCCTTCHH
T ss_pred cccEEEEEEcCCC-eEEEEeCEEEECCCCcchH
Confidence 78888887643 4689999999999987643
No 106
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.31 E-value=2.4e-12 Score=117.55 Aligned_cols=151 Identities=17% Similarity=0.126 Sum_probs=88.3
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCC-cc-cccccccchhcc--ccccc
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRY-PV-HSSLYKSLRVNL--PRELM 78 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~--~~~~~ 78 (354)
+||+|||||++|+++|..|+++|++|+|+|+.+......-. ...|... .+ ....++.+.... .....
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~---------~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 76 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGE---------SLLPRCMEHLDEAGFLDAVKAQGFQQKFGA 76 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCC---------BCCGGGHHHHHHTTCHHHHHHTTCEEECEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccC---------cccHhHHHHHHHcCChHHHHHcCCcccCCc
Confidence 79999999999999999999999999999997532100000 0000000 00 000011100000 00000
Q ss_pred cc------cCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEE
Q 018550 79 GF------QAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEE 152 (354)
Q Consensus 79 ~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~ 152 (354)
.+ ..+++..... ..........+..+.+.+.+.+.+.|++ ++++++|+++..++ +.+.+.....++...+
T Consensus 77 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~L~~~a~~~gv~--i~~~~~v~~i~~~~-~~~~v~v~~~~g~~~~ 152 (421)
T 3nix_A 77 KFVRGKEIADFNFSDQFS-NGWNWTWQVPRGNFDKTLADEAARQGVD--VEYEVGVTDIKFFG-TDSVTTIEDINGNKRE 152 (421)
T ss_dssp EEEETTEEEEEETTSCSS-CSCCCEEECCHHHHHHHHHHHHHHHTCE--EECSEEEEEEEEET-TEEEEEEEETTSCEEE
T ss_pred EEEeCCeeEEEeehhhcC-CCCCceeEECHHHHHHHHHHHHHhCCCE--EEcCCEEEEEEEeC-CEEEEEEEcCCCCEEE
Confidence 00 0000100000 0001111256689999999999888998 99999999999876 6666665544444457
Q ss_pred EEeCEEEEeeCCCC
Q 018550 153 ETFDAVVVCNGHFS 166 (354)
Q Consensus 153 ~~~d~vIlAtG~~s 166 (354)
+.+|.||+|+|.++
T Consensus 153 ~~a~~vV~A~G~~s 166 (421)
T 3nix_A 153 IEARFIIDASGYGR 166 (421)
T ss_dssp EEEEEEEECCGGGC
T ss_pred EEcCEEEECCCCch
Confidence 99999999999655
No 107
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.31 E-value=8e-12 Score=116.20 Aligned_cols=139 Identities=19% Similarity=0.221 Sum_probs=87.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||||++|+++|..|++.|++|+|||+.+.+|+.... .+.| .....+....... ...
T Consensus 92 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~~---------~~~~-------~~~~~l~~~g~~~--~~~ 153 (497)
T 2bry_A 92 NTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNVL---------HLWP-------FTIHDLRALGAKK--FYG 153 (497)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCEE---------ECCH-------HHHHHHHTTTHHH--HCT
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCcc---------cCCh-------hHHHHHHHcCCcc--ccc
Confidence 478999999999999999999999999999998766532111 0000 0000000000000 000
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeC--CCcEEEEEeec-CCceEEEEeCEE
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVE--SNKWKVKSRKK-DDVVEEETFDAV 158 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~--~~~~~v~~~~g-~~~~~~~~~d~v 158 (354)
.+.. ......+..++.+.+.+.+.+.+++ ++++++|+++..++ ++.+.+++.+. ++...++.+|+|
T Consensus 154 ~~~~---------~~~~~~~~~~l~~~L~~~~~~~gv~--v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~V 222 (497)
T 2bry_A 154 RFCT---------GTLDHISIRQLQLLLLKVALLLGVE--IHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVL 222 (497)
T ss_dssp TTTC---------TTCCEEEHHHHHHHHHHHHHHTTCE--EEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEE
T ss_pred cccc---------cccccCCHHHHHHHHHHHHHhCCCE--EEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEE
Confidence 0000 0001123478888898888888888 99999999998742 25678877432 221236899999
Q ss_pred EEeeCCCCCcc
Q 018550 159 VVCNGHFSVPR 169 (354)
Q Consensus 159 IlAtG~~s~~~ 169 (354)
|+|+|..+..+
T Consensus 223 V~A~G~~S~~r 233 (497)
T 2bry_A 223 ISAAGGKFVPE 233 (497)
T ss_dssp EECCCTTCCCT
T ss_pred EECCCCCcccc
Confidence 99999665544
No 108
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.31 E-value=5.1e-12 Score=119.25 Aligned_cols=156 Identities=19% Similarity=0.084 Sum_probs=89.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCC--Ccccccccccchhcccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNR--YPVHSSLYKSLRVNLPRELMG 79 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 79 (354)
.++|+|||||++|+++|..|+++|++|+|||+.+........ .++.+.. .+.....++.+..........
T Consensus 49 ~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~--------~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~ 120 (570)
T 3fmw_A 49 TTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRA--------GALHIRTVETLDLRGLLDRFLEGTQVAKGL 120 (570)
T ss_dssp --CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSC--------CCBCHHHHHHHHTTTCHHHHTTSCCBCSBC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceE--------EEECHHHHHHHHHcCChHHHHhcCcccCCc
Confidence 468999999999999999999999999999997654211000 0000000 000000111110000000000
Q ss_pred -ccCC---CCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEe
Q 018550 80 -FQAY---PFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETF 155 (354)
Q Consensus 80 -~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~ 155 (354)
+... .+................+..+.+.+.+.+.+.+++ ++++++|++++.++ +.+++++.+.++ ..++.+
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~--i~~~~~v~~l~~~~-~~v~v~~~~~~G-~~~~~a 196 (570)
T 3fmw_A 121 PFAGIFTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAE--IPRGHEVTRLRQDA-EAVEVTVAGPSG-PYPVRA 196 (570)
T ss_dssp CBTTBCTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEE--CCBSCEEEECCBCS-SCEEEEEEETTE-EEEEEE
T ss_pred eeCCcccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCE--EEeCCEEEEEEEcC-CeEEEEEEeCCC-cEEEEe
Confidence 0000 000000000001112356688999999999888888 89999999999877 778888753222 148999
Q ss_pred CEEEEeeCCCCCcc
Q 018550 156 DAVVVCNGHFSVPR 169 (354)
Q Consensus 156 d~vIlAtG~~s~~~ 169 (354)
|+||.|+|.+|..+
T Consensus 197 ~~vV~ADG~~S~vR 210 (570)
T 3fmw_A 197 RYGVGCDGGRSTVR 210 (570)
T ss_dssp SEEEECSCSSCHHH
T ss_pred CEEEEcCCCCchHH
Confidence 99999999776443
No 109
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.30 E-value=5.6e-12 Score=111.84 Aligned_cols=154 Identities=17% Similarity=0.271 Sum_probs=85.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHH---cCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcc--cccccccchh---cc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLR---EGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPV--HSSLYKSLRV---NL 73 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~---~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~---~~ 73 (354)
+++|+|||||++|+++|+.|++ .|++|+||||++.+||.+............+......+ .......+.. ..
T Consensus 1 m~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~ 80 (342)
T 3qj4_A 1 MAQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDEL 80 (342)
T ss_dssp CEEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHH
T ss_pred CCcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHH
Confidence 3689999999999999999999 99999999999888887654211000000000000000 0000000000 00
Q ss_pred -ccccccccCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEE
Q 018550 74 -PRELMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEE 152 (354)
Q Consensus 74 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~ 152 (354)
.... ...+...............|.....+..+.+..++..+.+ ++++++|++|.+++ ++|+|++.+|. .
T Consensus 81 ~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~--i~~~~~V~~i~~~~-~~~~v~~~~g~----~ 151 (342)
T 3qj4_A 81 LAYGV--LRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAE--VYFRHRVTQINLRD-DKWEVSKQTGS----P 151 (342)
T ss_dssp HHTTS--CEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTCE--EESSCCEEEEEECS-SSEEEEESSSC----C
T ss_pred HhCCC--eecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCCE--EEeCCEEEEEEEcC-CEEEEEECCCC----E
Confidence 0000 0000000000000000111211233344555555666877 99999999999977 78999988764 5
Q ss_pred EEeCEEEEeeCC
Q 018550 153 ETFDAVVVCNGH 164 (354)
Q Consensus 153 ~~~d~vIlAtG~ 164 (354)
+.+|.||+|+..
T Consensus 152 ~~ad~vV~A~p~ 163 (342)
T 3qj4_A 152 EQFDLIVLTMPV 163 (342)
T ss_dssp EEESEEEECSCH
T ss_pred EEcCEEEECCCH
Confidence 799999999984
No 110
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.29 E-value=7.3e-12 Score=116.82 Aligned_cols=156 Identities=19% Similarity=0.240 Sum_probs=88.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCcc-------ceeecCCCCCCCC--CCCCCCCCcccccccccchh-
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVG-------GSWIYTSETESDP--LGVDPNRYPVHSSLYKSLRV- 71 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~g-------g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~- 71 (354)
.++|+|||||++|+++|..|++.|++|+|+|+++.++ +.|......+... .+......+.+..++..+..
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~~ 186 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP 186 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEeccc
Confidence 4789999999999999999999999999999987653 2333211000000 00000000000011110000
Q ss_pred -cccccccc-ccCCCCCccCCCCCCCCCCCC---CHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeec
Q 018550 72 -NLPRELMG-FQAYPFVARNYEGSVDLRRYP---GHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKK 146 (354)
Q Consensus 72 -~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g 146 (354)
..+..... +..+..+.... ....... ....+.+.+.+.+.+.|++ ++++++|+++..+++..+.+++.++
T Consensus 187 ~~~~~~v~~~~~~~G~~~~i~---~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~--I~~~t~V~~I~~~~~~v~gV~l~~G 261 (549)
T 3nlc_A 187 NFYGRKVITEFVEAGAPEEIL---YVSKPHIGTFKLVTMIEKMRATIIELGGE--IRFSTRVDDLHMEDGQITGVTLSNG 261 (549)
T ss_dssp TCHHHHHHHHHHHTTCCGGGG---TBSSCCCCHHHHHHHHHHHHHHHHHTTCE--EESSCCEEEEEESSSBEEEEEETTS
T ss_pred cccHHHHHHHHHHcCCCceEe---eccccccccchHHHHHHHHHHHHHhcCCE--EEeCCEEEEEEEeCCEEEEEEECCC
Confidence 00000000 00111100000 0000111 1256778888888888998 9999999999987633455777776
Q ss_pred CCceEEEEeCEEEEeeCCCC
Q 018550 147 DDVVEEETFDAVVVCNGHFS 166 (354)
Q Consensus 147 ~~~~~~~~~d~vIlAtG~~s 166 (354)
. ++.+|.||+|+|.++
T Consensus 262 ~----~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 262 E----EIKSRHVVLAVGHSA 277 (549)
T ss_dssp C----EEECSCEEECCCTTC
T ss_pred C----EEECCEEEECCCCCh
Confidence 4 799999999999766
No 111
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.29 E-value=3e-11 Score=106.72 Aligned_cols=156 Identities=17% Similarity=0.300 Sum_probs=83.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCC-CCCCCCCCCCCcccccccccc----hhc-cc
Q 018550 1 MFRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETE-SDPLGVDPNRYPVHSSLYKSL----RVN-LP 74 (354)
Q Consensus 1 ~~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----~~~-~~ 74 (354)
|+++|+|||||++|+++|..|++.|++|+|||+.+.+|+.+....... ....+. .........+..+ ... ..
T Consensus 1 m~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 78 (336)
T 1yvv_A 1 MTVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGA--QYFTARDRRFATAVKQWQAQGHV 78 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSC--CCBCCCSHHHHHHHHHHHHHTSE
T ss_pred CCceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCC--CeEecCCHHHHHHHHHHHhCCCe
Confidence 678999999999999999999999999999999988877654311000 000000 0000000000000 000 00
Q ss_pred c---cccc-ccCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCce
Q 018550 75 R---ELMG-FQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVV 150 (354)
Q Consensus 75 ~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~ 150 (354)
. ..+. +....+... ......|.....+....+...+ +++ ++++++|++++.++ +.|++++.+|.
T Consensus 79 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~--g~~--i~~~~~v~~i~~~~-~~~~v~~~~g~--- 146 (336)
T 1yvv_A 79 AEWTPLLYNFHAGRLSPS----PDEQVRWVGKPGMSAITRAMRG--DMP--VSFSCRITEVFRGE-EHWNLLDAEGQ--- 146 (336)
T ss_dssp EEECCCEEEESSSBCCCC----CTTSCEEEESSCTHHHHHHHHT--TCC--EECSCCEEEEEECS-SCEEEEETTSC---
T ss_pred eeccccceeccCcccccC----CCCCccEEcCccHHHHHHHHHc--cCc--EEecCEEEEEEEeC-CEEEEEeCCCc---
Confidence 0 0000 000000000 0001111111122222222222 777 99999999999887 78999887764
Q ss_pred EEEEeCEEEEeeCCCCCccc
Q 018550 151 EEETFDAVVVCNGHFSVPRL 170 (354)
Q Consensus 151 ~~~~~d~vIlAtG~~s~~~~ 170 (354)
....+|+||+|+|..+..+.
T Consensus 147 ~~~~a~~vV~a~g~~~~~~~ 166 (336)
T 1yvv_A 147 NHGPFSHVIIATPAPQASTL 166 (336)
T ss_dssp EEEEESEEEECSCHHHHGGG
T ss_pred CccccCEEEEcCCHHHHHHh
Confidence 23359999999996544443
No 112
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.26 E-value=8.3e-12 Score=113.47 Aligned_cols=148 Identities=18% Similarity=0.168 Sum_probs=87.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccc---eeecCCCCC--CCCCCCCCCCCcccccccccchhc-ccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGG---SWIYTSETE--SDPLGVDPNRYPVHSSLYKSLRVN-LPR 75 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg---~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 75 (354)
+++|+|||||++|+++|..|+++|++|+|+|+.+.+.. .+...+... ...++ .++.+... .+.
T Consensus 23 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg-----------~~~~~~~~~~~~ 91 (407)
T 3rp8_A 23 HMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLG-----------MGDIMETFGGPL 91 (407)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTT-----------CHHHHHHHSCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCC-----------CHHHHHhhcCCC
Confidence 47999999999999999999999999999999765421 111100000 00000 01100000 000
Q ss_pred ccccccC---------CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeec
Q 018550 76 ELMGFQA---------YPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKK 146 (354)
Q Consensus 76 ~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g 146 (354)
..+.+.+ ++..... ...........+..+.+.+.+.+.+ .+ ++++++|++++.++ +.+++++.+|
T Consensus 92 ~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~i~r~~l~~~L~~~~~~--~~--i~~~~~v~~i~~~~-~~v~v~~~~g 165 (407)
T 3rp8_A 92 RRMAYRDFRSGENMTQFSLAPLI-ERTGSRPCPVSRAELQREMLDYWGR--DS--VQFGKRVTRCEEDA-DGVTVWFTDG 165 (407)
T ss_dssp CEEEEEETTTCCEEEEEECHHHH-HHHSSCCEEEEHHHHHHHHHHHHCG--GG--EEESCCEEEEEEET-TEEEEEETTS
T ss_pred cceEEEECCCCCEeEEecchhhh-hhcCCceEEEEHHHHHHHHHHhCCc--CE--EEECCEEEEEEecC-CcEEEEEcCC
Confidence 0000000 0000000 0000011123457788888887765 55 89999999999987 7888888877
Q ss_pred CCceEEEEeCEEEEeeCCCCCccc
Q 018550 147 DDVVEEETFDAVVVCNGHFSVPRL 170 (354)
Q Consensus 147 ~~~~~~~~~d~vIlAtG~~s~~~~ 170 (354)
. ++.+|+||.|+|.+|..+.
T Consensus 166 ~----~~~a~~vV~AdG~~S~vr~ 185 (407)
T 3rp8_A 166 S----SASGDLLIAADGSHSALRP 185 (407)
T ss_dssp C----EEEESEEEECCCTTCSSHH
T ss_pred C----EEeeCEEEECCCcChHHHH
Confidence 5 8999999999998776553
No 113
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.26 E-value=1.4e-11 Score=111.51 Aligned_cols=145 Identities=17% Similarity=0.163 Sum_probs=84.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCc----cceeecCCCCC--CCCCCCCCCCCcccccccccchhcccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQV----GGSWIYTSETE--SDPLGVDPNRYPVHSSLYKSLRVNLPR 75 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~----gg~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (354)
+++|+|||||++|+++|..|++.|++|+|+|+.+.. |+.+...+... ...+++.+. ....+.
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~------------~~~~~~ 72 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELD------------SISVPS 72 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGG------------GTCBCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCccc------------cccccc
Confidence 479999999999999999999999999999997643 11111100000 000011100 000000
Q ss_pred ccccccCC-CCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEE
Q 018550 76 ELMGFQAY-PFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEET 154 (354)
Q Consensus 76 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ 154 (354)
..+.+.+. ..... ........+..+..+.+.+.+.+ .+++ ++++++|+++..++ +.+++++.+|. ++.
T Consensus 73 ~~~~~~~~~~g~~~--~~~~~~~~~~~~~~l~~~L~~~~--~~~~--i~~~~~v~~i~~~~-~~v~v~~~~g~----~~~ 141 (397)
T 2vou_A 73 SSMEYVDALTGERV--GSVPADWRFTSYDSIYGGLYELF--GPER--YHTSKCLVGLSQDS-ETVQMRFSDGT----KAE 141 (397)
T ss_dssp CEEEEEETTTCCEE--EEEECCCCEEEHHHHHHHHHHHH--CSTT--EETTCCEEEEEECS-SCEEEEETTSC----EEE
T ss_pred cceEEEecCCCCcc--ccccCcccccCHHHHHHHHHHhC--CCcE--EEcCCEEEEEEecC-CEEEEEECCCC----EEE
Confidence 00000000 00000 00000111234466667666654 3677 99999999999877 77888887764 799
Q ss_pred eCEEEEeeCCCCCcc
Q 018550 155 FDAVVVCNGHFSVPR 169 (354)
Q Consensus 155 ~d~vIlAtG~~s~~~ 169 (354)
+|+||.|+|.+|..+
T Consensus 142 ad~vV~AdG~~S~vr 156 (397)
T 2vou_A 142 ANWVIGADGGASVVR 156 (397)
T ss_dssp ESEEEECCCTTCHHH
T ss_pred CCEEEECCCcchhHH
Confidence 999999999776543
No 114
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.24 E-value=1.5e-11 Score=115.26 Aligned_cols=185 Identities=14% Similarity=0.094 Sum_probs=108.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC-CccceeecCCCCCCCCCCCCCCCCccc-ccccccchhcc------
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE-QVGGSWIYTSETESDPLGVDPNRYPVH-SSLYKSLRVNL------ 73 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~------ 73 (354)
.+||+|||||+||++||..|++.|.+|+|+|+.. .+|. .+|.|...... ......+....
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~------------~~Cnps~GGia~g~lv~eldalgg~~~~~ 94 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQ------------MSCNPAIGGIAKGIVVREIDALGGEMGKA 94 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC------------CCSCSEEECTTHHHHHHHHHHHTCSHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCC------------cCccccccccchHHHHHHHHHhhhHHHHH
Confidence 3799999999999999999999999999999863 3331 12333211110 00111110000
Q ss_pred -ccccccccCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHH-hCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceE
Q 018550 74 -PRELMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFARE-FGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVE 151 (354)
Q Consensus 74 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~ 151 (354)
......+..+....... ........++..+.+.+.+.+.+ .+++ + ++++|+++..+++..+.|.+.+|.
T Consensus 95 ~d~~gi~f~~l~~~kGpa--v~~~r~~~Dr~~~~~~L~~~Le~~~GVe--I-~~~~Vt~L~~e~g~V~GV~t~dG~---- 165 (637)
T 2zxi_A 95 IDQTGIQFKMLNTRKGKA--VQSPRAQADKKRYREYMKKVCENQENLY--I-KQEEVVDIIVKNNQVVGVRTNLGV---- 165 (637)
T ss_dssp HHHHEEEEEEESTTSCGG--GCEEEEEECHHHHHHHHHHHHHTCTTEE--E-EESCEEEEEESSSBEEEEEETTSC----
T ss_pred hhhcccceeecccccCcc--ccchhhhCCHHHHHHHHHHHHHhCCCCE--E-EEeEEEEEEecCCEEEEEEECCCc----
Confidence 00000010000000000 00000112446788888888877 4777 6 578999998766233457776664
Q ss_pred EEEeCEEEEeeCCCCCcccCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEec
Q 018550 152 EETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRS 229 (354)
Q Consensus 152 ~~~~d~vIlAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~ 229 (354)
.+.++.||+||| ..+..+.++|...+ . +.+ .|+.++.+++..|.+.|.++..+.+.
T Consensus 166 ~i~AdaVVLATG--~~s~~~~~~G~~~~-----~-----------~Gr----~G~~~A~~la~~L~~lG~~v~~l~tg 221 (637)
T 2zxi_A 166 EYKTKAVVVTTG--TFLNGVIYIGDKMI-----P-----------GGR----LGEPRSEGLSDFYRRFDFPLIRFKTG 221 (637)
T ss_dssp EEECSEEEECCT--TCBTCEEEETTEEE-----E-----------CSB----TTBCCBCTHHHHHHHTTCCCEEEEEE
T ss_pred EEEeCEEEEccC--CCccCceeccceec-----C-----------CCC----CCchhHHHHHHHHHhcCCceEEecCC
Confidence 899999999999 44444445554321 0 111 24678999999999999888777653
No 115
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.24 E-value=5.3e-11 Score=107.64 Aligned_cols=152 Identities=19% Similarity=0.229 Sum_probs=87.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCc------cceeecCCCCC-CCCCCCCCCCCcccccccccchhc-
Q 018550 1 MFRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQV------GGSWIYTSETE-SDPLGVDPNRYPVHSSLYKSLRVN- 72 (354)
Q Consensus 1 ~~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~------gg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~- 72 (354)
|+++|+|||||++|+++|..|++.|++|+|+|+.+.. ++......... ...++ .++.+...
T Consensus 1 m~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg-----------~~~~~~~~~ 69 (394)
T 1k0i_A 1 MKTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAG-----------VDRRMARDG 69 (394)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTT-----------CCHHHHHHC
T ss_pred CCccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcC-----------CcHHHHhcC
Confidence 6789999999999999999999999999999997532 11100000000 00001 11111000
Q ss_pred ccccccccc------CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEE-ee
Q 018550 73 LPRELMGFQ------AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKS-RK 145 (354)
Q Consensus 73 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~-~~ 145 (354)
.+...+.+. .+.+... . .........+..+.+.+.+.+.+.+++ ++++++|+++..++++.+.+++ .+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~l~~~L~~~~~~~g~~--i~~~~~v~~i~~~~~~~~~v~~~~~ 144 (394)
T 1k0i_A 70 LVHEGVEIAFAGQRRRIDLKRL--S-GGKTVTVYGQTEVTRDLMEAREACGAT--TVYQAAEVRLHDLQGERPYVTFERD 144 (394)
T ss_dssp EEESCEEEEETTEEEEECHHHH--H-TSCCEEECCHHHHHHHHHHHHHHTTCE--EESSCEEEEEECTTSSSCEEEEEET
T ss_pred CccceEEEEECCceEEeccccc--c-CCCceEEechHHHHHHHHHHHHhcCCe--EEeceeEEEEEEecCCceEEEEecC
Confidence 000000000 0000000 0 000001123467778888888777888 9999999999875435677877 44
Q ss_pred cCCceEEEEeCEEEEeeCCCCCccc
Q 018550 146 KDDVVEEETFDAVVVCNGHFSVPRL 170 (354)
Q Consensus 146 g~~~~~~~~~d~vIlAtG~~s~~~~ 170 (354)
| ...++.+|+||.|+|.+|..+.
T Consensus 145 g--~~~~~~a~~vV~AdG~~S~vr~ 167 (394)
T 1k0i_A 145 G--ERLRLDCDYIAGCDGFHGISRQ 167 (394)
T ss_dssp T--EEEEEECSEEEECCCTTCSTGG
T ss_pred C--cEEEEEeCEEEECCCCCcHHHH
Confidence 3 2246899999999998776554
No 116
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.23 E-value=2.3e-11 Score=113.83 Aligned_cols=155 Identities=17% Similarity=0.181 Sum_probs=88.0
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCC--Cccc-ccccccchhc-cccc--
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNR--YPVH-SSLYKSLRVN-LPRE-- 76 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~-~~~~-- 76 (354)
++|+|||||++|+++|..|+++|++|+|||+.+........ .+.|.. .++. ...++.+... .+..
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~---------~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~ 78 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGE---------SLLPATVHGICAMLGLTDEMKRAGFPIKRG 78 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCC---------BCCHHHHTTHHHHTTCHHHHHTTTCCEECE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCc---------ccCcchHHHHHHHhCcHHHHHHcCCccccC
Confidence 68999999999999999999999999999997522100000 000000 0000 0001110000 0000
Q ss_pred -cccccC------CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcE-EEEEeecCC
Q 018550 77 -LMGFQA------YPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKW-KVKSRKKDD 148 (354)
Q Consensus 77 -~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~-~v~~~~g~~ 148 (354)
.+.+.. +.+.... ...........+..+.+.+.+.+.+.|++ ++++++|+++..++ +.. .+.+...++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~--i~~~~~V~~v~~~~-~~v~gv~~~~~dG 154 (512)
T 3e1t_A 79 GTFRWGKEPEPWTFGFTRHP-DDPYGFAYQVERARFDDMLLRNSERKGVD--VRERHEVIDVLFEG-ERAVGVRYRNTEG 154 (512)
T ss_dssp EEEECSSCSSCEEEESSSSS-SSTTCCEEBCCHHHHHHHHHHHHHHTTCE--EESSCEEEEEEEET-TEEEEEEEECSSS
T ss_pred ceEEecCCccccccccccCC-CCCcceeeEecHHHHHHHHHHHHHhCCCE--EEcCCEEEEEEEEC-CEEEEEEEEeCCC
Confidence 000000 0000000 00000111256788999999999888988 99999999999876 433 244444333
Q ss_pred ceEEEEeCEEEEeeCCCCCccc
Q 018550 149 VVEEETFDAVVVCNGHFSVPRL 170 (354)
Q Consensus 149 ~~~~~~~d~vIlAtG~~s~~~~ 170 (354)
...++.+|.||.|+|.++..+.
T Consensus 155 ~~~~i~ad~VI~AdG~~S~vr~ 176 (512)
T 3e1t_A 155 VELMAHARFIVDASGNRTRVSQ 176 (512)
T ss_dssp CEEEEEEEEEEECCCTTCSSGG
T ss_pred CEEEEEcCEEEECCCcchHHHH
Confidence 3458999999999997665443
No 117
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.23 E-value=4e-11 Score=107.49 Aligned_cols=61 Identities=18% Similarity=0.262 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEeeCCCCCcccC
Q 018550 103 EEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCNGHFSVPRLA 171 (354)
Q Consensus 103 ~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlAtG~~s~~~~p 171 (354)
..+.+.+.+.+.+.|++ ++.+++|+++..++ +.+.+.+.++ ++.+|.||+|+|.|+....+
T Consensus 149 ~~l~~~l~~~~~~~G~~--i~~~~~V~~i~~~~-~~~~v~~~~g-----~~~a~~vV~a~G~~s~~l~~ 209 (372)
T 2uzz_A 149 ELAIKTWIQLAKEAGCA--QLFNCPVTAIRHDD-DGVTIETADG-----EYQAKKAIVCAGTWVKDLLP 209 (372)
T ss_dssp HHHHHHHHHHHHHTTCE--EECSCCEEEEEECS-SSEEEEESSC-----EEEEEEEEECCGGGGGGTST
T ss_pred HHHHHHHHHHHHHCCCE--EEcCCEEEEEEEcC-CEEEEEECCC-----eEEcCEEEEcCCccHHhhcc
Confidence 57888888888888988 89999999999876 6688776654 58999999999987654433
No 118
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.22 E-value=3.2e-11 Score=107.88 Aligned_cols=64 Identities=11% Similarity=0.142 Sum_probs=51.5
Q ss_pred CHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEeeCCCCCc
Q 018550 101 GHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCNGHFSVP 168 (354)
Q Consensus 101 ~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlAtG~~s~~ 168 (354)
....+.+.+.+.+.+.|++ ++++++|+++..++++.+.+.+.+++ ..++.+|.||+|+|.|+..
T Consensus 148 ~~~~~~~~l~~~~~~~Gv~--i~~~~~v~~i~~~~~~~~~v~~~~g~--~~~~~a~~VV~A~G~~s~~ 211 (369)
T 3dme_A 148 DSHALMLAYQGDAESDGAQ--LVFHTPLIAGRVRPEGGFELDFGGAE--PMTLSCRVLINAAGLHAPG 211 (369)
T ss_dssp CHHHHHHHHHHHHHHTTCE--EECSCCEEEEEECTTSSEEEEECTTS--CEEEEEEEEEECCGGGHHH
T ss_pred CHHHHHHHHHHHHHHCCCE--EECCCEEEEEEEcCCceEEEEECCCc--eeEEEeCEEEECCCcchHH
Confidence 3467888888888889998 99999999999876344888877653 2479999999999987543
No 119
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.22 E-value=7.3e-11 Score=106.14 Aligned_cols=146 Identities=21% Similarity=0.155 Sum_probs=84.8
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccce---eecCCCCC--CCCCCCCCCCCcccccccccchhcccccc
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGS---WIYTSETE--SDPLGVDPNRYPVHSSLYKSLRVNLPREL 77 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~---~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (354)
++|+|||||++|+++|..|+++|++|+|+|+.+.++.. ....+... ...+++.... .........+..... .
T Consensus 12 ~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~-~~~~~~~~~~~~~~~--g 88 (379)
T 3alj_A 12 RRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDV-LQGSHTPPTYETWMH--N 88 (379)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHH-HTTCBCCSCEEEEET--T
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHH-HhhCCCccceEEEeC--C
Confidence 68999999999999999999999999999997655321 10000000 0000000000 000000000000000 0
Q ss_pred ccccCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCE
Q 018550 78 MGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDA 157 (354)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~ 157 (354)
..+..++.. ........+..+.+.+.+.+.+.|++ ++++++|++++. + + .+++.+|. ++.+|+
T Consensus 89 ~~~~~~~~~-------~~~~~~~~r~~l~~~L~~~~~~~gv~--i~~~~~v~~i~~-~-~--~v~~~~g~----~~~ad~ 151 (379)
T 3alj_A 89 KSVSKETFN-------GLPWRIMTRSHLHDALVNRARALGVD--ISVNSEAVAADP-V-G--RLTLQTGE----VLEADL 151 (379)
T ss_dssp EEEEEECGG-------GCCEEEEEHHHHHHHHHHHHHHTTCE--EESSCCEEEEET-T-T--EEEETTSC----EEECSE
T ss_pred ceeeeccCC-------CCceEEECHHHHHHHHHHHHHhcCCE--EEeCCEEEEEEe-C-C--EEEECCCC----EEEcCE
Confidence 000000000 00112235588899999999888888 999999999986 3 4 77777654 799999
Q ss_pred EEEeeCCCCCc
Q 018550 158 VVVCNGHFSVP 168 (354)
Q Consensus 158 vIlAtG~~s~~ 168 (354)
||+|+|.++..
T Consensus 152 vV~AdG~~s~v 162 (379)
T 3alj_A 152 IVGADGVGSKV 162 (379)
T ss_dssp EEECCCTTCHH
T ss_pred EEECCCccHHH
Confidence 99999976543
No 120
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.21 E-value=4.2e-11 Score=108.50 Aligned_cols=148 Identities=16% Similarity=0.103 Sum_probs=87.4
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCC--Ccccccccccchhc-ccccccc
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNR--YPVHSSLYKSLRVN-LPRELMG 79 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~ 79 (354)
++|+|||||++|+++|..|+++|++|+|+|+.+.+... +.. ..+.|.. .+..-..++.+... .+...+.
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~----~~~----~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 78 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAI----NGA----DLLKPAGIRVVEAAGLLAEVTRRGGRVRHEL 78 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC-------CCC----CEECHHHHHHHHHTTCHHHHHHTTCEEECEE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCcc----Cce----eeECchHHHHHHHcCcHHHHHHhCCCcceeE
Confidence 68999999999999999999999999999997644100 000 0000000 00000001111000 0000000
Q ss_pred --------ccCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHh-CCcceEEeceEEEEEEEeCCCcE--EEEEeecCC
Q 018550 80 --------FQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREF-GVDQVVRLHTEVLNARLVESNKW--KVKSRKKDD 148 (354)
Q Consensus 80 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~v~~~~~v~~i~~~~~~~~--~v~~~~g~~ 148 (354)
...++.... . .........+..+.+.+.+.+.+. +++ ++++++|++++.++ +.+ .+++.+|.
T Consensus 79 ~~~~~g~~~~~~~~~~~--~-~~~~~~~~~r~~l~~~L~~~~~~~~gv~--i~~~~~v~~i~~~~-~~v~g~v~~~~g~- 151 (399)
T 2x3n_A 79 EVYHDGELLRYFNYSSV--D-ARGYFILMPCESLRRLVLEKIDGEATVE--MLFETRIEAVQRDE-RHAIDQVRLNDGR- 151 (399)
T ss_dssp EEEETTEEEEEEETTSS--C-GGGCEEECCHHHHHHHHHHHHTTCTTEE--EECSCCEEEEEECT-TSCEEEEEETTSC-
T ss_pred EEeCCCCEEEecchHHh--c-ccCccccccHHHHHHHHHHHhhhcCCcE--EEcCCEEEEEEEcC-CceEEEEEECCCC-
Confidence 000000000 0 000011245688899999888877 777 99999999999877 677 78887764
Q ss_pred ceEEEEeCEEEEeeCCCCCc
Q 018550 149 VVEEETFDAVVVCNGHFSVP 168 (354)
Q Consensus 149 ~~~~~~~d~vIlAtG~~s~~ 168 (354)
++.+|.||+|+|.+|..
T Consensus 152 ---~~~ad~vV~AdG~~s~v 168 (399)
T 2x3n_A 152 ---VLRPRVVVGADGIASYV 168 (399)
T ss_dssp ---EEEEEEEEECCCTTCHH
T ss_pred ---EEECCEEEECCCCChHH
Confidence 78999999999976653
No 121
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.20 E-value=7.1e-11 Score=106.96 Aligned_cols=148 Identities=20% Similarity=0.230 Sum_probs=86.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCcc-----ceeecCCCCCCCCCCCCCCCCcccccccccchhcc-cc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVG-----GSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNL-PR 75 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~g-----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 75 (354)
.++|+|||||++|+++|..|++.|++|+|||+.+.++ +.+...+... ...+.....++.+.... +.
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~--------~~~l~~~gl~~~~~~~~~~~ 97 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSG--------QEAMKKAGLLQTYYDLALPM 97 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTH--------HHHHHHTTCHHHHHHHCBCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccH--------HHHHHhcChHHHHHHhhccc
Confidence 3689999999999999999999999999999976542 2222211000 00000000111111000 00
Q ss_pred --ccc-----cccCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCC
Q 018550 76 --ELM-----GFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDD 148 (354)
Q Consensus 76 --~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~ 148 (354)
..+ .+.....+.. .........+..+.+++.+.+. +.. ++++++|++++.++ +.+++++.+|.
T Consensus 98 ~~~~~~~~g~~~~~~~~~~~----~~~~~~~i~r~~l~~~L~~~~~--~~~--i~~~~~v~~i~~~~-~~v~v~~~~g~- 167 (398)
T 2xdo_A 98 GVNIADEKGNILSTKNVKPE----NRFDNPEINRNDLRAILLNSLE--NDT--VIWDRKLVMLEPGK-KKWTLTFENKP- 167 (398)
T ss_dssp CEEEECSSSEEEEECCCGGG----TTSSCCEECHHHHHHHHHHTSC--TTS--EEESCCEEEEEECS-SSEEEEETTSC-
T ss_pred ceEEECCCCCchhhcccccc----CCCCCceECHHHHHHHHHhhcC--CCE--EEECCEEEEEEECC-CEEEEEECCCc-
Confidence 000 0000000000 0001112355677777766553 245 89999999999877 77889887764
Q ss_pred ceEEEEeCEEEEeeCCCCCccc
Q 018550 149 VVEEETFDAVVVCNGHFSVPRL 170 (354)
Q Consensus 149 ~~~~~~~d~vIlAtG~~s~~~~ 170 (354)
++.+|+||.|+|.+|..+.
T Consensus 168 ---~~~ad~vV~AdG~~S~vR~ 186 (398)
T 2xdo_A 168 ---SETADLVILANGGMSKVRK 186 (398)
T ss_dssp ---CEEESEEEECSCTTCSCCT
T ss_pred ---EEecCEEEECCCcchhHHh
Confidence 7899999999998776554
No 122
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.19 E-value=1.5e-11 Score=113.31 Aligned_cols=152 Identities=14% Similarity=0.065 Sum_probs=87.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCcc--ceeecCCCCC---CCCCCCCCCC-Ccccccccccchhcccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVG--GSWIYTSETE---SDPLGVDPNR-YPVHSSLYKSLRVNLPR 75 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~g--g~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 75 (354)
+++|+|||||++|+++|..|+++|++|+|+|+.+.+. ..+.- .... ...++..... ... ...+.......+.
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g-~~l~~~~l~~lg~~~~~~~~~-~~~~~~~~~~~~~ 83 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCG-DAVSKAHFDKLGMPYPKGEEL-ENKINGIKLYSPD 83 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCC-CEEEHHHHHHTTCCCCCGGGE-EEEEEEEEEECTT
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCccccc-ccccHHHHHHhcCCCCchHHH-HhhhcceEEECCC
Confidence 4799999999999999999999999999999976431 11000 0000 0000000000 000 0000000000000
Q ss_pred ccccccCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEE-EEEeec-CCceEEE
Q 018550 76 ELMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWK-VKSRKK-DDVVEEE 153 (354)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~-v~~~~g-~~~~~~~ 153 (354)
.... +++. .......+..+.+.+.+.+.+.|++ ++++++|+++..++ +.+. +++.+. ++...++
T Consensus 84 ~~~~---~~~~--------~~~~~i~r~~l~~~L~~~a~~~gv~--i~~~~~v~~i~~~~-~~v~gv~~~~~~~G~~~~~ 149 (453)
T 3atr_A 84 MQTV---WTVN--------GEGFELNAPLYNQRVLKEAQDRGVE--IWDLTTAMKPIFED-GYVKGAVLFNRRTNEELTV 149 (453)
T ss_dssp SSCE---EEEE--------EEEEEECHHHHHHHHHHHHHHTTCE--EESSEEEEEEEEET-TEEEEEEEEETTTTEEEEE
T ss_pred CceE---EeEC--------CCcEEEcHHHHHHHHHHHHHHcCCE--EEeCcEEEEEEEEC-CEEEEEEEEEcCCCceEEE
Confidence 0000 0000 0001235578899999998888888 99999999999876 5543 555532 3333579
Q ss_pred EeCEEEEeeCCCCCcc
Q 018550 154 TFDAVVVCNGHFSVPR 169 (354)
Q Consensus 154 ~~d~vIlAtG~~s~~~ 169 (354)
.+|.||+|+|.++..+
T Consensus 150 ~ad~VV~AdG~~s~vr 165 (453)
T 3atr_A 150 YSKVVVEATGYSRSFR 165 (453)
T ss_dssp ECSEEEECCGGGCTTG
T ss_pred EcCEEEECcCCchhhH
Confidence 9999999999766543
No 123
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.19 E-value=1.7e-10 Score=109.25 Aligned_cols=158 Identities=17% Similarity=0.218 Sum_probs=88.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHc------CCcEEEEeeCCCccceeecCCCCCCCCCC---CCCC----CCccccccc-c
Q 018550 2 FRHVAVIGAGAAGLVVGHELLRE------GHTVVVYEKGEQVGGSWIYTSETESDPLG---VDPN----RYPVHSSLY-K 67 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~------g~~v~lie~~~~~gg~~~~~~~~~~~~~~---~~~~----~~~~~~~~~-~ 67 (354)
.+||+|||||++|+++|..|+++ |++|+||||.+.+|+.......+ .+.. +.+. ......... .
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l--~~~~l~~ll~~~~~~g~~~~~~~~~~ 112 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACL--DPRAFEELFPDWKEKGAPLNTPVTED 112 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEE--CTHHHHHHCTTHHHHTCCCCEECCEE
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCcccccccc--CHHHHHHHHHHHHhcCCceeeeechh
Confidence 47899999999999999999999 99999999987766432111000 0000 0000 000000000 0
Q ss_pred cchhccccccccccCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEE-EEEee-
Q 018550 68 SLRVNLPRELMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWK-VKSRK- 145 (354)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~-v~~~~- 145 (354)
.+.......... ++.... ............+..+.+++.+.+.+.|++ ++++++|+++..++++... |.+.+
T Consensus 113 ~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~--i~~g~~v~~l~~~~~g~V~gV~~~~~ 186 (584)
T 2gmh_A 113 RFGILTEKYRIP---VPILPG-LPMNNHGNYVVRLGHLVSWMGEQAEALGVE--VYPGYAAAEILFHEDGSVKGIATNDV 186 (584)
T ss_dssp EEEEECSSCEEE---CCCCTT-STTCCTTCEECCHHHHHHHHHHHHHHTTCE--EETTCCEEEEEECTTSSEEEEEECCE
T ss_pred heeeeccCCCcc---ccccCc-cccccCCCEEEeHHHHHHHHHHHHHHcCCE--EEcCCEEEEEEEcCCCCEEEEEeCCc
Confidence 000000000000 110000 000001112246688999999999988998 9999999999987634333 66552
Q ss_pred ---cCCc-------eEEEEeCEEEEeeCCCCC
Q 018550 146 ---KDDV-------VEEETFDAVVVCNGHFSV 167 (354)
Q Consensus 146 ---g~~~-------~~~~~~d~vIlAtG~~s~ 167 (354)
.++. ..++.+|+||+|+|.++.
T Consensus 187 g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 187 GIQKDGAPKTTFERGLELHAKVTIFAEGCHGH 218 (584)
T ss_dssp EECTTSCEEEEEECCCEEECSEEEECCCTTCH
T ss_pred cccCCCCcccccCCceEEECCEEEEeeCCCch
Confidence 1111 137999999999997664
No 124
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.18 E-value=1.1e-10 Score=110.48 Aligned_cols=164 Identities=18% Similarity=0.160 Sum_probs=91.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCC-------CCCC--CCCC----------ccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDP-------LGVD--PNRY----------PVH 62 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~-------~~~~--~~~~----------~~~ 62 (354)
.+||+|||||++|+++|..|+++|.+|+|+||.+.+|+......+..+.. .+.. ++.. ...
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~ 205 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNIND 205 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 36899999999999999999999999999999988876655433211000 0000 0000 000
Q ss_pred ccccccchhccccccccc--cCCCCCcc-CCCCCCCCC------CCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEE
Q 018550 63 SSLYKSLRVNLPRELMGF--QAYPFVAR-NYEGSVDLR------RYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARL 133 (354)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~ 133 (354)
......+....+.....+ .+.++... ......... .......+.+.+.+.+.+.+++ ++++++|+++..
T Consensus 206 ~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~--i~~~~~v~~l~~ 283 (571)
T 1y0p_A 206 PALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNID--LRMNTRGIEVLK 283 (571)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCE--EESSEEEEEEEE
T ss_pred HHHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCE--EEeCCEeeEeEE
Confidence 000000000000000000 01111100 000000000 0122467888899999888998 999999999998
Q ss_pred eCCC-cEEEEEeecCCceEEEEeCEEEEeeCCCCC
Q 018550 134 VESN-KWKVKSRKKDDVVEEETFDAVVVCNGHFSV 167 (354)
Q Consensus 134 ~~~~-~~~v~~~~g~~~~~~~~~d~vIlAtG~~s~ 167 (354)
++++ .+.+...+.++....+.+|.||+|||.++.
T Consensus 284 ~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~ 318 (571)
T 1y0p_A 284 DDKGTVKGILVKGMYKGYYWVKADAVILATGGFAK 318 (571)
T ss_dssp CTTSCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred cCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCccc
Confidence 6523 233555542333457899999999997654
No 125
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.17 E-value=5.9e-11 Score=112.32 Aligned_cols=163 Identities=18% Similarity=0.222 Sum_probs=91.2
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCC-------CCCCCC--CC----------cccc
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDP-------LGVDPN--RY----------PVHS 63 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~-------~~~~~~--~~----------~~~~ 63 (354)
+||+|||||++|+++|..|+++|.+|+|||+.+.+|+......+..+.. .+.... .. ....
T Consensus 122 ~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~~~~ 201 (566)
T 1qo8_A 122 TQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQNDI 201 (566)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSCH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCCH
Confidence 5899999999999999999999999999999887776544432211100 000000 00 0000
Q ss_pred cccccchhccccccccc--cCCCCCcc-CCCCCCC------CCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEe
Q 018550 64 SLYKSLRVNLPRELMGF--QAYPFVAR-NYEGSVD------LRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLV 134 (354)
Q Consensus 64 ~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~ 134 (354)
.....+....+.....+ .+.++... ....... .........+.+.+.+.+.+.+++ ++++++|+++..+
T Consensus 202 ~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~--i~~~~~v~~l~~~ 279 (566)
T 1qo8_A 202 KLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGID--TRLNSRVVKLVVN 279 (566)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCC--EECSEEEEEEEEC
T ss_pred HHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCE--EEeCCEEEEEEEC
Confidence 00000000000000000 01111100 0000000 001123567888999999889998 9999999999876
Q ss_pred C-CCcEEEEEeecCCceEEEEeCEEEEeeCCCCC
Q 018550 135 E-SNKWKVKSRKKDDVVEEETFDAVVVCNGHFSV 167 (354)
Q Consensus 135 ~-~~~~~v~~~~g~~~~~~~~~d~vIlAtG~~s~ 167 (354)
+ +..+.+...+.++....+.+|.||+|||.++.
T Consensus 280 ~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 280 DDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp TTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTT
T ss_pred CCCcEEEEEEEeCCCcEEEEEcCEEEEecCCccc
Confidence 5 22234555533333457899999999998765
No 126
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.17 E-value=2.2e-10 Score=108.42 Aligned_cols=153 Identities=22% Similarity=0.233 Sum_probs=88.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCC--cccccccccchhcc-c---c
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRY--PVHSSLYKSLRVNL-P---R 75 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~---~ 75 (354)
.++|+|||||++|+++|..|+++|++|+|+|+.+......-. ++.|... +..-..++.+.... . .
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~---------~l~p~~~~~l~~lGl~~~l~~~~~~~~~~ 93 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGE---------SLLPGTMSILNRLGLQEKIDAQNYVKKPS 93 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCC---------BCCHHHHHHHHHTTCHHHHHHHCCEEECE
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceee---------eECHHHHHHHHHcCCcHHHHhcCCcccCC
Confidence 379999999999999999999999999999997433211000 0000000 00000000000000 0 0
Q ss_pred cccccc------CCCCCccCCCC-CCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCC
Q 018550 76 ELMGFQ------AYPFVARNYEG-SVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDD 148 (354)
Q Consensus 76 ~~~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~ 148 (354)
..+.+. .+.+....... .........+..+.+.+.+.+.+.|++ ++++++|+++..++++.+.|++.+ ++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~--i~~g~~V~~v~~~~g~~~~V~~~~-~G 170 (591)
T 3i3l_A 94 ATFLWGQDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGIT--VHEETPVTDVDLSDPDRVVLTVRR-GG 170 (591)
T ss_dssp EEEECSSSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCE--EETTCCEEEEECCSTTCEEEEEEE-TT
T ss_pred cEEEecCCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCE--EEeCCEEEEEEEcCCCEEEEEEec-CC
Confidence 000000 00000000000 000011245688999999999888998 999999999997643678888874 22
Q ss_pred ceEEEEeCEEEEeeCCCC
Q 018550 149 VVEEETFDAVVVCNGHFS 166 (354)
Q Consensus 149 ~~~~~~~d~vIlAtG~~s 166 (354)
...++.+|.||.|+|.++
T Consensus 171 ~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 171 ESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp EEEEEEESEEEECCGGGC
T ss_pred ceEEEEcCEEEECCCCcc
Confidence 235899999999999755
No 127
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.17 E-value=9.5e-12 Score=99.70 Aligned_cols=107 Identities=19% Similarity=0.123 Sum_probs=74.1
Q ss_pred eEEEEccCCCHHHHHHHHhccCCEEEEEEecCCcc------------------------ccccCCCCC-CeEEecceeEE
Q 018550 199 VVILIGHYASGLDIKRDLAGFAKEVHIASRSVADE------------------------THEKQPGYD-NMWLHSMVERA 253 (354)
Q Consensus 199 ~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~------------------------~~~~l~~~~-~~~~~~~v~~v 253 (354)
+++|||+|++|+++|..|++.|.+|+++.+.+... ..+.+++.+ +++.+ .|+++
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i 81 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVRPG-VVKGV 81 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEE
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEE
Confidence 68999999999999999999999999999875200 011112333 77888 89988
Q ss_pred ecCCc---EEEccCcEEecCEEEEcccCCCccCcc---cccC-------chhhhhceeeeecccchh
Q 018550 254 NEDGT---VVFRNGRVVSADVIMHCTGLTGTSTTT---LFLK-------PMALLLWMTIVLGHCTST 307 (354)
Q Consensus 254 ~~~~~---v~~~~g~~~~~D~vi~a~G~~~~~p~~---~~l~-------~~~~~~~~i~a~GD~~~~ 307 (354)
+.++. +.+++| ++++|.||+|+|..++.+.. ++-. .......+|||+|||+..
T Consensus 82 ~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~~~~~~g~~~~~g~i~vd~~~~t~~~~i~a~GD~~~~ 147 (180)
T 2ywl_A 82 RDMGGVFEVETEEG-VEKAERLLLCTHKDPTLPSLLGLTRRGAYIDTDEGGRTSYPRVYAAGVARGK 147 (180)
T ss_dssp EECSSSEEEECSSC-EEEEEEEEECCTTCCHHHHHHTCCEETTEECCCTTCBCSSTTEEECGGGGTC
T ss_pred EEcCCEEEEEECCC-EEEECEEEECCCCCCCccccCCCCccCceEEeCCCCCcCCCCEEEeecccCc
Confidence 75432 666677 89999999999999432111 1100 001123469999999974
No 128
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.17 E-value=2.8e-10 Score=98.02 Aligned_cols=139 Identities=16% Similarity=0.031 Sum_probs=81.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHHc-CCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLRE-GHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGF 80 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~-g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (354)
.+||+|||||++|+++|..|+++ |.+|+|+|+.+.+|+.+...+. ..............+. -
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~--------~~~~~~~~~~~~~~l~---------~ 101 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQ--------LFSAMIVRKPAHLFLD---------E 101 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCST--------TCCCEEEETTTHHHHH---------H
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCc--------chHHHHcCcHHHHHHH---------H
Confidence 36899999999999999999997 9999999998877654322111 1000000000000000 0
Q ss_pred cCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHH-hCCcceEEeceEEEEEEEeCCCc-EEEEEee---------c-CC
Q 018550 81 QAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFARE-FGVDQVVRLHTEVLNARLVESNK-WKVKSRK---------K-DD 148 (354)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~v~~~~~v~~i~~~~~~~-~~v~~~~---------g-~~ 148 (354)
.+.++... ...........+...+.+.+.+ .+++ ++++++|+++..++ +. ..+.+.. + .+
T Consensus 102 ~G~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~gv~--i~~~~~V~~i~~~~-~~v~gv~~~~~~~~~~~~~g~~g 173 (284)
T 1rp0_A 102 IGVAYDEQ-----DTYVVVKHAALFTSTIMSKLLARPNVK--LFNAVAAEDLIVKG-NRVGGVVTNWALVAQNHHTQSCM 173 (284)
T ss_dssp HTCCCEEC-----SSEEEESCHHHHHHHHHHHHHTSTTEE--EEETEEEEEEEEET-TEEEEEEEEEHHHHTCTTTSSCC
T ss_pred cCCCcccC-----CCEEEecCHHHHHHHHHHHHHhcCCCE--EEcCcEEEEEEecC-CeEEEEEEeccccccccCccccC
Confidence 01111110 0000001235666666666654 5777 99999999999876 43 2344431 1 01
Q ss_pred ceEEEEeCEEEEeeCCC
Q 018550 149 VVEEETFDAVVVCNGHF 165 (354)
Q Consensus 149 ~~~~~~~d~vIlAtG~~ 165 (354)
....+.+|.||+|+|..
T Consensus 174 ~~~~i~ad~VV~AtG~~ 190 (284)
T 1rp0_A 174 DPNVMEAKIVVSSCGHD 190 (284)
T ss_dssp CCEEEEEEEEEECCCSS
T ss_pred ceEEEECCEEEECCCCc
Confidence 23579999999999953
No 129
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.16 E-value=7.8e-11 Score=110.85 Aligned_cols=184 Identities=15% Similarity=0.164 Sum_probs=104.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC-CccceeecCCCCCCCCCCCCCCCCccc-ccccccchhc-------
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE-QVGGSWIYTSETESDPLGVDPNRYPVH-SSLYKSLRVN------- 72 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~------- 72 (354)
.+||+|||||+||+++|..|++.|.+|+|+|+.. .+|+. +|.|...... ......+...
T Consensus 21 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~------------~c~ps~gGia~~~lv~el~al~g~~~~~ 88 (641)
T 3cp8_A 21 MYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARM------------SCNPAIGGVAKGQITREIDALGGEMGKA 88 (641)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCC------------SSCSEEECHHHHHHHHHHHHHTCSHHHH
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCC------------ccccchhhhhHHHHHHHHHhcccHHHHH
Confidence 4799999999999999999999999999999864 23321 2222211100 0000000000
Q ss_pred cccccccccCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHh-CCcceEEeceEEEEEEEeCCCcEE-EEEeecCCce
Q 018550 73 LPRELMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREF-GVDQVVRLHTEVLNARLVESNKWK-VKSRKKDDVV 150 (354)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~v~~~~~v~~i~~~~~~~~~-v~~~~g~~~~ 150 (354)
.......+.......... ........++..+...+.+.+.+. +++ + ++.+|+++..++ +... |.+.+|.
T Consensus 89 ~d~~gi~f~~l~~~kgpa--v~~~r~~~Dr~~l~~~L~~~l~~~~GV~--I-~~~~V~~L~~d~-g~V~GV~t~~G~--- 159 (641)
T 3cp8_A 89 IDATGIQFRMLNRSKGPA--MHSPRAQADKTQYSLYMRRIVEHEPNID--L-LQDTVIGVSANS-GKFSSVTVRSGR--- 159 (641)
T ss_dssp HHHHEEEEEEECSSSCTT--TCEEEEEECHHHHHHHHHHHHHTCTTEE--E-EECCEEEEEEET-TEEEEEEETTSC---
T ss_pred HHhcCCchhhcccccCcc--ccchhhhcCHHHHHHHHHHHHHhCCCCE--E-EeeEEEEEEecC-CEEEEEEECCCc---
Confidence 000000110000000000 000001234467888888888774 777 6 456899988766 5443 6666654
Q ss_pred EEEEeCEEEEeeCCCCCcccCCCCCCCCCCcceeecccCCCCCCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEe
Q 018550 151 EEETFDAVVVCNGHFSVPRLAQVPGIDSWPGKQMHSHNYRIPNPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASR 228 (354)
Q Consensus 151 ~~~~~d~vIlAtG~~s~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r 228 (354)
.+.+|.||+|||.++ +.+...|...+ . +.++ + |+.++++++..|.+.|.++..+..
T Consensus 160 -~i~Ad~VVLATG~~s--~~~i~~G~~~~-----~-----------~g~~--v-G~~~a~~la~~L~~~G~kv~~l~t 215 (641)
T 3cp8_A 160 -AIQAKAAILACGTFL--NGLIHIGMDHF-----P-----------GGRS--T-AEPPVEGLTESLASLGFSFGRLKT 215 (641)
T ss_dssp -EEEEEEEEECCTTCB--TCEEEETTEEE-----E-----------CSSS--T-TSCCBCSHHHHHHHTTCCEEEEEE
T ss_pred -EEEeCEEEECcCCCC--Cccceeeeeee-----c-----------cccc--c-CCchhhhhHHHHHhCCceEEeecC
Confidence 899999999999543 32222222211 0 0111 1 467889999999999988876644
No 130
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.16 E-value=1.2e-10 Score=112.66 Aligned_cols=60 Identities=20% Similarity=0.324 Sum_probs=50.6
Q ss_pred CHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEeeCCCCC
Q 018550 101 GHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCNGHFSV 167 (354)
Q Consensus 101 ~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlAtG~~s~ 167 (354)
....+...+.+.+.+.|++ ++++++|+++..++ +.|.|.+.++. ++.+|.||+|+|.++.
T Consensus 415 ~p~~l~~aL~~~a~~~Gv~--i~~~t~V~~l~~~~-~~v~V~t~~G~----~i~Ad~VVlAtG~~s~ 474 (676)
T 3ps9_A 415 CPAELTRNVLELAQQQGLQ--IYYQYQLQNFSRKD-DCWLLNFAGDQ----QATHSVVVLANGHQIS 474 (676)
T ss_dssp CHHHHHHHHHHHHHHTTCE--EEESCCEEEEEEET-TEEEEEETTSC----EEEESEEEECCGGGGG
T ss_pred CHHHHHHHHHHHHHhCCCE--EEeCCeeeEEEEeC-CeEEEEECCCC----EEECCEEEECCCcchh
Confidence 3467888888888888998 99999999999887 77888877654 7999999999997654
No 131
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.15 E-value=2.3e-10 Score=103.92 Aligned_cols=45 Identities=18% Similarity=0.200 Sum_probs=38.7
Q ss_pred EEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEeeCCCCCccc
Q 018550 122 VRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCNGHFSVPRL 170 (354)
Q Consensus 122 v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlAtG~~s~~~~ 170 (354)
+++++++++++..+++..++++.+|+ ++++|+||.|+|.+|..+.
T Consensus 126 v~~~~~v~~~~~~~~~~v~v~~~dG~----~~~adlvVgADG~~S~vR~ 170 (412)
T 4hb9_A 126 IQWNKTFVRYEHIENGGIKIFFADGS----HENVDVLVGADGSNSKVRK 170 (412)
T ss_dssp EECSCCEEEEEECTTSCEEEEETTSC----EEEESEEEECCCTTCHHHH
T ss_pred EEEEEEEEeeeEcCCCeEEEEECCCC----EEEeeEEEECCCCCcchHH
Confidence 89999999999876577889998886 8899999999998776553
No 132
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.15 E-value=4.3e-10 Score=102.20 Aligned_cols=154 Identities=18% Similarity=0.152 Sum_probs=88.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCc-EEEEeeCCCccc---eeecCCCCC--CCCCCCCCCCCcccccccccchhc-cc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHT-VVVYEKGEQVGG---SWIYTSETE--SDPLGVDPNRYPVHSSLYKSLRVN-LP 74 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~-v~lie~~~~~gg---~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~ 74 (354)
.++|+|||||++|+++|..|++.|++ |+|+|+.+.++. .....+... ...++ .++.+... .+
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg-----------~~~~l~~~~~~ 72 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELG-----------LGPALAATAIP 72 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTT-----------CHHHHHHHSEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCC-----------ChHHHHhhCCC
Confidence 47999999999999999999999999 999999765431 111100000 00000 01111000 00
Q ss_pred cccccccCCCC------CccCCCCCCCCCCCCCHHHHHHHHHHHHHH-hC-CcceEEeceEEEEEEEeCCCcEEEEEeec
Q 018550 75 RELMGFQAYPF------VARNYEGSVDLRRYPGHEEVLRYLQNFARE-FG-VDQVVRLHTEVLNARLVESNKWKVKSRKK 146 (354)
Q Consensus 75 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~-~~~~v~~~~~v~~i~~~~~~~~~v~~~~g 146 (354)
...+.+.+... ................+..+.+.+.+.+.+ .+ ++ ++++++|+++.. + +.+++++.+.
T Consensus 73 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~--v~~~~~v~~i~~-~-~~v~v~~~~~ 148 (410)
T 3c96_A 73 THELRYIDQSGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQA--VRTGLGVERIEE-R-DGRVLIGARD 148 (410)
T ss_dssp ECEEEEECTTSCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTS--EEESEEEEEEEE-E-TTEEEEEEEE
T ss_pred cceEEEEcCCCCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcE--EEECCEEEEEec-C-CccEEEEecC
Confidence 00000000000 000000000001123557888888888876 46 46 899999999998 5 6788887761
Q ss_pred -CCceEEEEeCEEEEeeCCCCCccc
Q 018550 147 -DDVVEEETFDAVVVCNGHFSVPRL 170 (354)
Q Consensus 147 -~~~~~~~~~d~vIlAtG~~s~~~~ 170 (354)
++...++.+|+||.|+|.+|..+.
T Consensus 149 ~~g~~~~~~ad~vV~AdG~~S~vR~ 173 (410)
T 3c96_A 149 GHGKPQALGADVLVGADGIHSAVRA 173 (410)
T ss_dssp TTSCEEEEEESEEEECCCTTCHHHH
T ss_pred CCCCceEEecCEEEECCCccchhHH
Confidence 122347899999999998776553
No 133
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.14 E-value=1.6e-10 Score=103.90 Aligned_cols=60 Identities=22% Similarity=0.165 Sum_probs=48.7
Q ss_pred CCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEeeCCCCC
Q 018550 100 PGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCNGHFSV 167 (354)
Q Consensus 100 ~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlAtG~~s~ 167 (354)
.....+.+.+.+.+.+.|++ +..+++|+++..++ +.+.+.+.++ ++.+|.||+|+|.++.
T Consensus 161 ~~~~~~~~~l~~~~~~~g~~--i~~~~~v~~i~~~~-~~~~v~~~~g-----~~~a~~vV~A~G~~s~ 220 (382)
T 1ryi_A 161 VEPYFVCKAYVKAAKMLGAE--IFEHTPVLHVERDG-EALFIKTPSG-----DVWANHVVVASGVWSG 220 (382)
T ss_dssp CCHHHHHHHHHHHHHHTTCE--EETTCCCCEEECSS-SSEEEEETTE-----EEEEEEEEECCGGGTH
T ss_pred EcHHHHHHHHHHHHHHCCCE--EEcCCcEEEEEEEC-CEEEEEcCCc-----eEEcCEEEECCChhHH
Confidence 34478888899988888988 99999999998776 6777766543 6899999999997654
No 134
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.14 E-value=1.6e-10 Score=104.20 Aligned_cols=58 Identities=22% Similarity=0.326 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEeeCCCCC
Q 018550 102 HEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCNGHFSV 167 (354)
Q Consensus 102 ~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlAtG~~s~ 167 (354)
...+...+.+.+.+.|++ ++.+++|+++..++ +.+.+.+.++ ++.+|.||+|+|.|+.
T Consensus 149 ~~~~~~~l~~~~~~~Gv~--i~~~~~v~~i~~~~-~~~~v~~~~g-----~~~a~~vV~A~G~~~~ 206 (389)
T 2gf3_A 149 SENCIRAYRELAEARGAK--VLTHTRVEDFDISP-DSVKIETANG-----SYTADKLIVSMGAWNS 206 (389)
T ss_dssp HHHHHHHHHHHHHHTTCE--EECSCCEEEEEECS-SCEEEEETTE-----EEEEEEEEECCGGGHH
T ss_pred HHHHHHHHHHHHHHCCCE--EEcCcEEEEEEecC-CeEEEEeCCC-----EEEeCEEEEecCccHH
Confidence 367888888888888998 99999999999876 6677776443 6899999999997654
No 135
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.12 E-value=3.4e-10 Score=101.85 Aligned_cols=58 Identities=24% Similarity=0.178 Sum_probs=47.9
Q ss_pred CHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEE-EEEeecCCceEEEEeCEEEEeeCCCC
Q 018550 101 GHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWK-VKSRKKDDVVEEETFDAVVVCNGHFS 166 (354)
Q Consensus 101 ~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~-v~~~~g~~~~~~~~~d~vIlAtG~~s 166 (354)
+...+...+.+.+.+.|++ +..+++|+++..++ +.+. +.+.++ ++.+|.||+|+|.|+
T Consensus 147 ~~~~l~~~l~~~~~~~Gv~--i~~~~~v~~i~~~~-~~v~gv~~~~g-----~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 147 DPFEATTAFAVKAKEYGAK--LLEYTEVKGFLIEN-NEIKGVKTNKG-----IIKTGIVVNATNAWA 205 (382)
T ss_dssp CHHHHHHHHHHHHHHTTCE--EECSCCEEEEEESS-SBEEEEEETTE-----EEECSEEEECCGGGH
T ss_pred CHHHHHHHHHHHHHHCCCE--EECCceEEEEEEEC-CEEEEEEECCc-----EEECCEEEECcchhH
Confidence 3477888888888888998 99999999999876 6676 766543 689999999999765
No 136
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.11 E-value=2.9e-10 Score=104.24 Aligned_cols=62 Identities=18% Similarity=0.133 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHHhCCcceEEece---EEEEEEEeCCCcEE-EEEeecCCceEEEEeCEEEEeeCCCCCccc
Q 018550 102 HEEVLRYLQNFAREFGVDQVVRLHT---EVLNARLVESNKWK-VKSRKKDDVVEEETFDAVVVCNGHFSVPRL 170 (354)
Q Consensus 102 ~~~~~~~l~~~~~~~~~~~~v~~~~---~v~~i~~~~~~~~~-v~~~~g~~~~~~~~~d~vIlAtG~~s~~~~ 170 (354)
...+...+.+.+.+.|++ +++++ +|++|..++ +.++ |.+.++. ++.+|.||+|+|.|+....
T Consensus 160 ~~~~~~~L~~~a~~~Gv~--i~~~t~~~~V~~i~~~~-~~v~gV~t~~G~----~i~Ad~VV~AtG~~s~~l~ 225 (438)
T 3dje_A 160 ARNALVAAAREAQRMGVK--FVTGTPQGRVVTLIFEN-NDVKGAVTADGK----IWRAERTFLCAGASAGQFL 225 (438)
T ss_dssp HHHHHHHHHHHHHHTTCE--EEESTTTTCEEEEEEET-TEEEEEEETTTE----EEECSEEEECCGGGGGGTS
T ss_pred HHHHHHHHHHHHHhcCCE--EEeCCcCceEEEEEecC-CeEEEEEECCCC----EEECCEEEECCCCChhhhc
Confidence 467888888888889998 99998 999999876 6776 8777663 7999999999998765433
No 137
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.11 E-value=8.2e-10 Score=104.04 Aligned_cols=159 Identities=11% Similarity=0.045 Sum_probs=86.5
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeec---CCCCC--CCCCCCCCCCCccc-ccccc---cchhcc
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIY---TSETE--SDPLGVDPNRYPVH-SSLYK---SLRVNL 73 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~---~~~~~--~~~~~~~~~~~~~~-~~~~~---~~~~~~ 73 (354)
++|+||||||+|+++|..|+++|++|+|||+.+.++....- +++.. ...+++... +.. ..... ......
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~--~~~~~~~~~~~~~~~~~~ 104 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQ--IRTAGWPGDHPLDAAWVT 104 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHH--HHTSSCCTTSBCCEEEES
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHH--HHhhcCCcccccceEEec
Confidence 58999999999999999999999999999998655321100 00000 000000000 000 00000 000000
Q ss_pred ccccccccCCCCCccCC--C--CCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeec-CC
Q 018550 74 PRELMGFQAYPFVARNY--E--GSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKK-DD 148 (354)
Q Consensus 74 ~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g-~~ 148 (354)
......+..+++..... . .........++..+.+.+.+.+.+. ++++++|++++.++ +.+++++.+. ++
T Consensus 105 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~-----v~~~~~v~~~~~~~-~~v~v~~~~~~~G 178 (549)
T 2r0c_A 105 RVGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER-----LRTRSRLDSFEQRD-DHVRATITDLRTG 178 (549)
T ss_dssp SBTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG-----EECSEEEEEEEECS-SCEEEEEEETTTC
T ss_pred cCCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh-----cccCcEEEEEEEeC-CEEEEEEEECCCC
Confidence 00000000011100000 0 0001112245577888888877664 78999999999877 7788888762 22
Q ss_pred ceEEEEeCEEEEeeCCCCCcc
Q 018550 149 VVEEETFDAVVVCNGHFSVPR 169 (354)
Q Consensus 149 ~~~~~~~d~vIlAtG~~s~~~ 169 (354)
...++.+|+||.|+|.+|..+
T Consensus 179 ~~~~i~a~~vVgADG~~S~vR 199 (549)
T 2r0c_A 179 ATRAVHARYLVACDGASSPTR 199 (549)
T ss_dssp CEEEEEEEEEEECCCTTCHHH
T ss_pred CEEEEEeCEEEECCCCCcHHH
Confidence 235799999999999877543
No 138
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.11 E-value=1.6e-10 Score=103.88 Aligned_cols=59 Identities=17% Similarity=0.186 Sum_probs=49.6
Q ss_pred CHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEeeCCCCC
Q 018550 101 GHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCNGHFSV 167 (354)
Q Consensus 101 ~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlAtG~~s~ 167 (354)
+...+...+.+.+.+.|++ ++++++|+++..++ +.+.|.+.++ ++.+|.||+|+|.|+.
T Consensus 152 ~~~~~~~~l~~~a~~~Gv~--i~~~~~V~~i~~~~-~~~~V~t~~g-----~i~a~~VV~A~G~~s~ 210 (381)
T 3nyc_A 152 DTDALHQGYLRGIRRNQGQ--VLCNHEALEIRRVD-GAWEVRCDAG-----SYRAAVLVNAAGAWCD 210 (381)
T ss_dssp CHHHHHHHHHHHHHHTTCE--EESSCCCCEEEEET-TEEEEECSSE-----EEEESEEEECCGGGHH
T ss_pred CHHHHHHHHHHHHHHCCCE--EEcCCEEEEEEEeC-CeEEEEeCCC-----EEEcCEEEECCChhHH
Confidence 3467888888888888998 99999999999887 6688877664 7899999999997653
No 139
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.10 E-value=1.2e-10 Score=107.49 Aligned_cols=214 Identities=20% Similarity=0.200 Sum_probs=106.5
Q ss_pred eEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCC--CCCCCCCCCCccc----------ccccccchh
Q 018550 4 HVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETES--DPLGVDPNRYPVH----------SSLYKSLRV 71 (354)
Q Consensus 4 ~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~--~~~~~~~~~~~~~----------~~~~~~~~~ 71 (354)
||+|||+|++|+++|..|++.|.+|+|+||. ..++......+... ....+.|...+.+ ......+..
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~ 79 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTS 79 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHH
Confidence 6999999999999999999999999999998 55544332211110 0011222110000 000000000
Q ss_pred cccccccccc--CCCCCcc--CCCCCCCCC----CCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcE-EEE
Q 018550 72 NLPRELMGFQ--AYPFVAR--NYEGSVDLR----RYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKW-KVK 142 (354)
Q Consensus 72 ~~~~~~~~~~--~~~~~~~--~~~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~-~v~ 142 (354)
..+.....+. +.++... ......... .-.....+...+.+.+++.+++ +..+++| ++..++ +.. .+.
T Consensus 80 ~~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~--i~~~~~v-~l~~~~-~~v~Gv~ 155 (472)
T 2e5v_A 80 EAKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIP--IIEDRLV-EIRVKD-GKVTGFV 155 (472)
T ss_dssp HHHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCC--EECCCEE-EEEEET-TEEEEEE
T ss_pred HHHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCE--EEECcEE-EEEEeC-CEEEEEE
Confidence 0000000000 1111110 000000000 0012356777787777778998 9999999 998765 432 233
Q ss_pred EeecCCceEEEEeCEEEEeeCCCCCcccCCCC-CCCCCCcceeecc-----cCCCCCCCCCC-eEEEEccCCCHHHHHHH
Q 018550 143 SRKKDDVVEEETFDAVVVCNGHFSVPRLAQVP-GIDSWPGKQMHSH-----NYRIPNPFQDQ-VVILIGHYASGLDIKRD 215 (354)
Q Consensus 143 ~~~g~~~~~~~~~d~vIlAtG~~s~~~~p~~~-g~~~~~~~~~~~~-----~~~~~~~~~~~-~v~ViG~G~~g~e~a~~ 215 (354)
..+.+ .++.+|.||+||| ..+..+... +.....+..+... ...+....+.. +++++|+| +++++..
T Consensus 156 v~~~~---g~~~a~~VVlAtG--g~~~~~~~~~~~~~~tGdgi~~a~~aGa~~~d~e~~q~~p~~~~~ggg--~~~~ae~ 228 (472)
T 2e5v_A 156 TEKRG---LVEDVDKLVLATG--GYSYLYEYSSTQSTNIGDGMAIAFKAGTILADMEFVQFHPTVTSLDGE--VFLLTET 228 (472)
T ss_dssp ETTTE---EECCCSEEEECCC--CCGGGSSSBSSCTTCSCHHHHHHHHTTCCEECTTCEEEEEEEECGGGC--CEECCTH
T ss_pred EEeCC---CeEEeeeEEECCC--CCcccCccccCCCCCchHHHHHHHHcCCCEeCCcceEEEeEEEccCCC--ceeeehh
Confidence 32211 2567999999999 555554432 1122223321110 01111111111 34455766 8888888
Q ss_pred HhccCCEEEEEEecC
Q 018550 216 LAGFAKEVHIASRSV 230 (354)
Q Consensus 216 l~~~g~~v~~~~r~~ 230 (354)
+...|..+ +..+.+
T Consensus 229 ~~~~G~~~-v~~~g~ 242 (472)
T 2e5v_A 229 LRGEGAQI-INENGE 242 (472)
T ss_dssp HHHTTCEE-EETTCC
T ss_pred hcCCceEE-ECCCCC
Confidence 88888766 444433
No 140
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.08 E-value=5.3e-10 Score=104.47 Aligned_cols=60 Identities=15% Similarity=0.210 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCc-EEEEEeecCCceEEEEeC-EEEEeeCCCC
Q 018550 104 EVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNK-WKVKSRKKDDVVEEETFD-AVVVCNGHFS 166 (354)
Q Consensus 104 ~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~-~~v~~~~g~~~~~~~~~d-~vIlAtG~~s 166 (354)
.+...+.+.+.+.|++ ++++++|+++..++++. ..|...++ +...++.++ .||+|||.++
T Consensus 203 ~l~~~L~~~~~~~Gv~--i~~~t~v~~L~~~~~g~v~GV~~~~~-g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVR--AEYDMRVQTLVTDDTGRVVGIVAKQY-GKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCE--EECSEEEEEEEECTTCCEEEEEEEET-TEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCE--EEecCEeEEEEECCCCcEEEEEEEEC-CcEEEEEeCCeEEEeCCChh
Confidence 7888898888888998 99999999999873243 33555543 334578995 9999999766
No 141
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.06 E-value=6.2e-10 Score=107.75 Aligned_cols=60 Identities=13% Similarity=0.332 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEeeCCCCC
Q 018550 102 HEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCNGHFSV 167 (354)
Q Consensus 102 ~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlAtG~~s~ 167 (354)
...+...+.+.+.+.|++ ++++++|+++..++ +.|.|.+.+|. .++.+|.||+|+|.++.
T Consensus 411 p~~l~~aL~~~a~~~Gv~--i~~~t~V~~l~~~~-~~v~V~t~~G~---~~i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 411 PSDLTHALMMLAQQNGMT--CHYQHELQRLKRID-SQWQLTFGQSQ---AAKHHATVILATGHRLP 470 (689)
T ss_dssp HHHHHHHHHHHHHHTTCE--EEESCCEEEEEECS-SSEEEEEC-CC---CCEEESEEEECCGGGTT
T ss_pred HHHHHHHHHHHHHhCCCE--EEeCCeEeEEEEeC-CeEEEEeCCCc---EEEECCEEEECCCcchh
Confidence 467888888888888998 99999999999887 67888887652 15899999999998754
No 142
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.06 E-value=5.4e-10 Score=101.06 Aligned_cols=56 Identities=18% Similarity=0.181 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEeeCCCC
Q 018550 103 EEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCNGHFS 166 (354)
Q Consensus 103 ~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlAtG~~s 166 (354)
..+...+.+.+.+.|++ +.++++|+++..++ +.+++.+.++ ++.+|.||+|+|.|+
T Consensus 153 ~~~~~~l~~~a~~~Gv~--i~~~~~V~~i~~~~-~~v~v~t~~g-----~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 153 RGTLAALFTLAQAAGAT--LRAGETVTELVPDA-DGVSVTTDRG-----TYRAGKVVLACGPYT 208 (397)
T ss_dssp HHHHHHHHHHHHHTTCE--EEESCCEEEEEEET-TEEEEEESSC-----EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCE--EECCCEEEEEEEcC-CeEEEEECCC-----EEEcCEEEEcCCcCh
Confidence 56777788888888988 99999999999876 6677765443 789999999999754
No 143
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.05 E-value=1.9e-10 Score=100.22 Aligned_cols=40 Identities=25% Similarity=0.392 Sum_probs=35.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHc--CCcEEEEeeCCCcccee
Q 018550 2 FRHVAVIGAGAAGLVVGHELLRE--GHTVVVYEKGEQVGGSW 41 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~--g~~v~lie~~~~~gg~~ 41 (354)
.+||+|||||++|+++|..|+++ |++|+|+|+.+.+|+.+
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~ 120 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGA 120 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTT
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCcc
Confidence 47999999999999999999997 99999999987776543
No 144
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.05 E-value=3e-09 Score=100.59 Aligned_cols=163 Identities=21% Similarity=0.192 Sum_probs=91.2
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCC---CC----CCCC--CCCC----------cccc
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETES---DP----LGVD--PNRY----------PVHS 63 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~---~~----~~~~--~~~~----------~~~~ 63 (354)
++|+|||+|++|+++|..|++.|.+|+|+|+.+.+|+......+..+ .+ .+.. ++.. ....
T Consensus 127 ~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~~ 206 (572)
T 1d4d_A 127 TDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNINDP 206 (572)
T ss_dssp CSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCSCH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCCH
Confidence 58999999999999999999999999999999888766554432211 00 0000 0000 0000
Q ss_pred cccccchhccccccccc--cCCCCCccC-CCCCCCC------CCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEe
Q 018550 64 SLYKSLRVNLPRELMGF--QAYPFVARN-YEGSVDL------RRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLV 134 (354)
Q Consensus 64 ~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~------~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~ 134 (354)
.....+....+.....+ .+.++.... ....... ........+...+.+.+.+.+++ ++++++|+++..+
T Consensus 207 ~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv~--i~~~t~v~~l~~~ 284 (572)
T 1d4d_A 207 ELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTD--IRLNSRVVRILED 284 (572)
T ss_dssp HHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCE--EESSEEEEEEEEC
T ss_pred HHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCCe--EEecCEEEEEEEC
Confidence 00000000000000000 011111000 0000000 01122467888899999888998 9999999999875
Q ss_pred C-CCcEEEEEeecCCceEEEEeCEEEEeeCCCCC
Q 018550 135 E-SNKWKVKSRKKDDVVEEETFDAVVVCNGHFSV 167 (354)
Q Consensus 135 ~-~~~~~v~~~~g~~~~~~~~~d~vIlAtG~~s~ 167 (354)
+ +..+.+...+.++....+.+|.||+|||.++.
T Consensus 285 ~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 285 ASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAK 318 (572)
T ss_dssp --CCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred CCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCcc
Confidence 4 23344555543333457899999999997654
No 145
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.05 E-value=9e-10 Score=103.84 Aligned_cols=64 Identities=13% Similarity=0.006 Sum_probs=49.7
Q ss_pred CHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeec-CCceEEEEeCEEEEeeCCCC
Q 018550 101 GHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKK-DDVVEEETFDAVVVCNGHFS 166 (354)
Q Consensus 101 ~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g-~~~~~~~~~d~vIlAtG~~s 166 (354)
+...+...+...+.+.|.. +.++++|+++..+++..+.+.+.+. +++..++.++.||+|+|.|+
T Consensus 168 d~~~l~~~L~~~a~~~G~~--i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 168 DDARLTLEIMKEAVARGAV--ALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp CHHHHHHHHHHHHHHTTCE--EEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred cHHHHHHHHHHHHHHcCCE--EEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 3467888888888888998 9999999999987633356777652 22346899999999999765
No 146
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.04 E-value=4.5e-10 Score=107.68 Aligned_cols=155 Identities=16% Similarity=0.082 Sum_probs=89.3
Q ss_pred CeEEEEcCChHHHHHHHHHHH-cCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCC--Ccccccccccchhc-------
Q 018550 3 RHVAVIGAGAAGLVVGHELLR-EGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNR--YPVHSSLYKSLRVN------- 72 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~-~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~------- 72 (354)
++|+|||||++|+++|..|++ .|++|+|||+.+.+.....- .++.|.. .+..-...+.+...
T Consensus 33 ~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a--------~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~ 104 (639)
T 2dkh_A 33 VDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQA--------DGIACRTMEMFEAFEFADSILKEACWINDV 104 (639)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSC--------CEECHHHHHHHHHTTCHHHHHHHSEEECEE
T ss_pred CcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCce--------eeeCHHHHHHHHHcCcHHHHHHhcccccce
Confidence 589999999999999999999 99999999997654311100 0000000 00000000000000
Q ss_pred ---cc-----cccccccCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC--cceEEeceEEEEEEEeCC---CcE
Q 018550 73 ---LP-----RELMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGV--DQVVRLHTEVLNARLVES---NKW 139 (354)
Q Consensus 73 ---~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~v~~~~~v~~i~~~~~---~~~ 139 (354)
.+ ........++.... ..........++..+.+.+.+.+.+.+. + ++++++|+++..+++ ..+
T Consensus 105 ~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~--v~~~~~v~~l~~~~~~~~~~v 180 (639)
T 2dkh_A 105 TFWKPDPGQPGRIARHGRVQDTED--GLSEFPHVILNQARVHDHYLERMRNSPSRLE--PHYARRVLDVKVDHGAADYPV 180 (639)
T ss_dssp EEEEECTTSTTCEEEEEEEESSCT--TSCSSCEEECCHHHHHHHHHHHHHHSTTCCC--CBCSEEEEEEEECTTCSSCCE
T ss_pred EEECCCCCCCcceEeecccCcccC--CCCCCceEeeCHHHHHHHHHHHHHhCCCCcE--EecCCEEEEEEECCCCCcCCE
Confidence 00 00000000000000 0000011124567899999999999876 6 899999999998652 257
Q ss_pred EEEEee----cCCceEEEEeCEEEEeeCCCCCcc
Q 018550 140 KVKSRK----KDDVVEEETFDAVVVCNGHFSVPR 169 (354)
Q Consensus 140 ~v~~~~----g~~~~~~~~~d~vIlAtG~~s~~~ 169 (354)
++++.+ .++...++.+|+||.|+|.+|..+
T Consensus 181 ~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~vR 214 (639)
T 2dkh_A 181 TVTLERCDAAHAGQIETVQARYVVGCDGARSNVR 214 (639)
T ss_dssp EEEEEECSGGGTTCEEEEEEEEEEECCCTTCHHH
T ss_pred EEEEEeccccCCCCeEEEEeCEEEECCCcchHHH
Confidence 787765 233345899999999999877543
No 147
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.03 E-value=1.3e-09 Score=101.47 Aligned_cols=64 Identities=14% Similarity=0.109 Sum_probs=51.1
Q ss_pred CHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeec-CCceEEEEeCEEEEeeCCCCC
Q 018550 101 GHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKK-DDVVEEETFDAVVVCNGHFSV 167 (354)
Q Consensus 101 ~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g-~~~~~~~~~d~vIlAtG~~s~ 167 (354)
+...+...+.+.+.+.|++ +..+++|+++..++ +.|.+.+.+. ++...++.+|.||+|+|.|+.
T Consensus 147 ~~~~l~~~l~~~a~~~Gv~--i~~~~~V~~l~~~~-~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~ 211 (501)
T 2qcu_A 147 DDARLVLANAQMVVRKGGE--VLTRTRATSARREN-GLWIVEAEDIDTGKKYSWQARGLVNATGPWVK 211 (501)
T ss_dssp CHHHHHHHHHHHHHHTTCE--EECSEEEEEEEEET-TEEEEEEEETTTCCEEEEEESCEEECCGGGHH
T ss_pred cHHHHHHHHHHHHHHcCCE--EEcCcEEEEEEEeC-CEEEEEEEECCCCCEEEEECCEEEECCChhHH
Confidence 3467888888888888998 99999999999877 7788887642 222357899999999998754
No 148
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.02 E-value=2.4e-09 Score=98.65 Aligned_cols=101 Identities=23% Similarity=0.244 Sum_probs=81.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||+|++|+.+|..|++.|.+|+++|+.+.+..
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~------------------------------------------ 204 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILP------------------------------------------ 204 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT------------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCcccc------------------------------------------
Confidence 36899999999999999999999999999998753310
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEe
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlA 161 (354)
. .. .++.+.+.+.+++.|++ ++++++|++++.++ +.+.+.+.++. ++.+|.||+|
T Consensus 205 ---~-~~--------------~~~~~~l~~~l~~~Gv~--i~~~~~V~~i~~~~-~~v~v~~~~g~----~i~~D~vv~A 259 (455)
T 2yqu_A 205 ---T-MD--------------LEVSRAAERVFKKQGLT--IRTGVRVTAVVPEA-KGARVELEGGE----VLEADRVLVA 259 (455)
T ss_dssp ---T-SC--------------HHHHHHHHHHHHHHTCE--EECSCCEEEEEEET-TEEEEEETTSC----EEEESEEEEC
T ss_pred ---c-cC--------------HHHHHHHHHHHHHCCCE--EEECCEEEEEEEeC-CEEEEEECCCe----EEEcCEEEEC
Confidence 0 00 66778888888888999 99999999999876 56667665543 7999999999
Q ss_pred eCCCCCcccC
Q 018550 162 NGHFSVPRLA 171 (354)
Q Consensus 162 tG~~s~~~~p 171 (354)
+| .+|+.+
T Consensus 260 ~G--~~p~~~ 267 (455)
T 2yqu_A 260 VG--RRPYTE 267 (455)
T ss_dssp SC--EEECCT
T ss_pred cC--CCcCCC
Confidence 99 566554
No 149
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.02 E-value=5.2e-10 Score=102.32 Aligned_cols=42 Identities=31% Similarity=0.567 Sum_probs=38.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeec
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIY 43 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~ 43 (354)
++||+|||||++|+++|+.|+++|.+|+|+|+++.+||.+..
T Consensus 1 ~~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~t 42 (431)
T 3k7m_X 1 MYDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAYS 42 (431)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCE
T ss_pred CCCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeecc
Confidence 379999999999999999999999999999998889988763
No 150
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.01 E-value=2.2e-09 Score=97.31 Aligned_cols=59 Identities=22% Similarity=0.166 Sum_probs=47.0
Q ss_pred CHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEeeCCCC
Q 018550 101 GHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCNGHFS 166 (354)
Q Consensus 101 ~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlAtG~~s 166 (354)
+...+...+.+.+.+.|++ ++++++|+++..+++..+.+.+.++ ++.+|.||+|+|.++
T Consensus 172 ~~~~~~~~l~~~~~~~g~~--i~~~~~v~~i~~~~~~~~~v~~~~g-----~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 172 KHDHVAWAFARKANEMGVD--IIQNCEVTGFIKDGEKVTGVKTTRG-----TIHAGKVALAGAGHS 230 (405)
T ss_dssp CHHHHHHHHHHHHHHTTCE--EECSCCEEEEEESSSBEEEEEETTC-----CEEEEEEEECCGGGH
T ss_pred CHHHHHHHHHHHHHHCCCE--EEcCCeEEEEEEeCCEEEEEEeCCc-----eEECCEEEECCchhH
Confidence 3467888888888888988 9999999999987523466766554 589999999999754
No 151
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.00 E-value=2e-09 Score=103.50 Aligned_cols=163 Identities=16% Similarity=0.108 Sum_probs=88.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHH-----cCCcEEEEeeCCCccce---eecCCCCC--CCCCCCCCCCCcccccccccchh
Q 018550 2 FRHVAVIGAGAAGLVVGHELLR-----EGHTVVVYEKGEQVGGS---WIYTSETE--SDPLGVDPNRYPVHSSLYKSLRV 71 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~-----~g~~v~lie~~~~~gg~---~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 71 (354)
.++|+||||||+|+++|..|++ .|++|+|||+.+..... ....++.. ...+|+.... .........+..
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~~~tle~l~~lGl~~~l-~~~~~~~~~~~~ 86 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGLADKI-LSEANDMSTIAL 86 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTTTCHHHH-HTTCBCCCEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEChHHHHHHHHCCCHHHH-HHhccccceEEE
Confidence 3689999999999999999999 99999999997543210 00000000 0001110000 000000000000
Q ss_pred cccc--cccc-ccCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhC---CcceEEeceEEEEEEEeC-------CCc
Q 018550 72 NLPR--ELMG-FQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFG---VDQVVRLHTEVLNARLVE-------SNK 138 (354)
Q Consensus 72 ~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~v~~~~~v~~i~~~~-------~~~ 138 (354)
..+. .... ...++.... ..........++..+.+.+.+.+.+.+ ++ ++++++++++..++ +..
T Consensus 87 ~~~~~~g~i~~~~~~~~~~~--~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~--v~~g~~v~~~~~d~~~~~~~~~~~ 162 (665)
T 1pn0_A 87 YNPDENGHIRRTDRIPDTLP--GISRYHQVVLHQGRIERRILDSIAEISDTRIK--VERPLIPEKMEIDSSKAEDPEAYP 162 (665)
T ss_dssp EEECTTSCEEEEEEEESSCT--TSCSSCCEECCHHHHHHHHHHHHHHHHTTSSC--EECSEEEEEEEECGGGTTCTTCCC
T ss_pred EeCCCCcceEeecccCcccC--CCCCCeeEEeeHHHHHHHHHHHHHhcCCCceE--EEeCCEEEEEEecCcccccCCCCC
Confidence 0000 0000 000000000 000011122456888899999988876 77 99999999998864 135
Q ss_pred EEEEEeec----------------------------------------CCceEEEEeCEEEEeeCCCCCcc
Q 018550 139 WKVKSRKK----------------------------------------DDVVEEETFDAVVVCNGHFSVPR 169 (354)
Q Consensus 139 ~~v~~~~g----------------------------------------~~~~~~~~~d~vIlAtG~~s~~~ 169 (354)
+++++.+. ++..+++.+|+||.|+|.+|..+
T Consensus 163 V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~VR 233 (665)
T 1pn0_A 163 VTMTLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWVR 233 (665)
T ss_dssp EEEEEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCHHH
T ss_pred EEEEEEecccccccccccccccccccccccccccccccccccccccCCCCceEEEEeCEEEeccCCCCHHH
Confidence 77766542 23346899999999999877644
No 152
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.00 E-value=2.2e-09 Score=101.61 Aligned_cols=64 Identities=11% Similarity=-0.086 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHhCCcceEEeceEEEEEEEe-CCCcEEEEEee-cCCceEEEEeCEEEEeeCCCCCc
Q 018550 103 EEVLRYLQNFAREFGVDQVVRLHTEVLNARLV-ESNKWKVKSRK-KDDVVEEETFDAVVVCNGHFSVP 168 (354)
Q Consensus 103 ~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~-~~~~~~v~~~~-g~~~~~~~~~d~vIlAtG~~s~~ 168 (354)
..+...+.+.+.+.+++ ++++++|+++..+ ++....+...+ .++....+.++.||+|||.++..
T Consensus 143 ~~l~~~L~~~~~~~gv~--i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~~ 208 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTT--IFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRI 208 (588)
T ss_dssp HHHHHHHHHHHHHTTCE--EEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhCCCE--EEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCccc
Confidence 57778888888888988 9999999999986 42334455543 23334578999999999976543
No 153
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.96 E-value=3.7e-09 Score=100.36 Aligned_cols=64 Identities=11% Similarity=0.104 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEee-cCCceEEEEeCEEEEeeCCCCCc
Q 018550 103 EEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRK-KDDVVEEETFDAVVVCNGHFSVP 168 (354)
Q Consensus 103 ~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~-g~~~~~~~~~d~vIlAtG~~s~~ 168 (354)
..+...+.+.+.+.+++ +..++.|+++..+++....+...+ .++....+.++.||+|||.++..
T Consensus 155 ~~l~~~L~~~~~~~gv~--i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTS--YFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYGRT 219 (621)
T ss_dssp HHHHHHHHHHHTTSCCE--EEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhCCCE--EEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccccc
Confidence 46777777777777888 999999999987652233455443 23334578999999999976643
No 154
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.96 E-value=4e-09 Score=94.89 Aligned_cols=101 Identities=22% Similarity=0.213 Sum_probs=81.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++++|||+|+.|+.+|..|++.|.+|+++|+.+.+....
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~---------------------------------------- 184 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGL---------------------------------------- 184 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhcc----------------------------------------
Confidence 4789999999999999999999999999999865331100
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEe
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlA 161 (354)
.. .++.+.+.+.+++.|++ ++++++|.++..++ +.+.+.+.++. ++++|.||+|
T Consensus 185 -----~~--------------~~~~~~l~~~l~~~gv~--i~~~~~v~~i~~~~-~~~~v~~~~g~----~i~~d~vv~a 238 (384)
T 2v3a_A 185 -----LH--------------PAAAKAVQAGLEGLGVR--FHLGPVLASLKKAG-EGLEAHLSDGE----VIPCDLVVSA 238 (384)
T ss_dssp -----SC--------------HHHHHHHHHHHHTTTCE--EEESCCEEEEEEET-TEEEEEETTSC----EEEESEEEEC
T ss_pred -----cC--------------HHHHHHHHHHHHHcCCE--EEeCCEEEEEEecC-CEEEEEECCCC----EEECCEEEEC
Confidence 00 66778888888888998 99999999998876 66777776664 7999999999
Q ss_pred eCCCCCccc
Q 018550 162 NGHFSVPRL 170 (354)
Q Consensus 162 tG~~s~~~~ 170 (354)
+| .+|+.
T Consensus 239 ~G--~~p~~ 245 (384)
T 2v3a_A 239 VG--LRPRT 245 (384)
T ss_dssp SC--EEECC
T ss_pred cC--CCcCH
Confidence 99 45543
No 155
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.95 E-value=9.5e-09 Score=94.80 Aligned_cols=106 Identities=25% Similarity=0.313 Sum_probs=82.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||||+.|+.+|..|++.|.+|+++|+.+.+...
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 207 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQ----------------------------------------- 207 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-----------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccc-----------------------------------------
Confidence 368999999999999999999999999999987543100
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEe-ecCCceEEEEeCEEEE
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSR-KKDDVVEEETFDAVVV 160 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~-~g~~~~~~~~~d~vIl 160 (354)
.. .++.+.+.+.+++.|++ ++++++|++++.++ +...+... +..+...++.+|.||+
T Consensus 208 -----~~--------------~~~~~~l~~~l~~~gV~--i~~~~~v~~i~~~~-~~~~v~~~~~~~g~~~~i~~D~vv~ 265 (464)
T 2eq6_A 208 -----GD--------------PETAALLRRALEKEGIR--VRTKTKAVGYEKKK-DGLHVRLEPAEGGEGEEVVVDKVLV 265 (464)
T ss_dssp -----SC--------------HHHHHHHHHHHHHTTCE--EECSEEEEEEEEET-TEEEEEEEETTCCSCEEEEESEEEE
T ss_pred -----cC--------------HHHHHHHHHHHHhcCCE--EEcCCEEEEEEEeC-CEEEEEEeecCCCceeEEEcCEEEE
Confidence 00 67778888888888999 99999999998776 56667765 3112234789999999
Q ss_pred eeCCCCCcccCC
Q 018550 161 CNGHFSVPRLAQ 172 (354)
Q Consensus 161 AtG~~s~~~~p~ 172 (354)
|+| ..|+...
T Consensus 266 a~G--~~p~~~~ 275 (464)
T 2eq6_A 266 AVG--RKPRTEG 275 (464)
T ss_dssp CSC--EEESCTT
T ss_pred CCC--cccCCCC
Confidence 999 6666543
No 156
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.95 E-value=5.4e-10 Score=95.76 Aligned_cols=43 Identities=35% Similarity=0.577 Sum_probs=39.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeec
Q 018550 1 MFRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIY 43 (354)
Q Consensus 1 ~~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~ 43 (354)
|+.+|+||||||||+++|..|+++|++|+||||.+.+||.+..
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~ 43 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSS 43 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccc
Confidence 7899999999999999999999999999999999999987653
No 157
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.94 E-value=4.6e-10 Score=101.83 Aligned_cols=57 Identities=12% Similarity=0.089 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHhCCcceEEeceEEE---------EEEEeCCCcEEEEEeecCCceEEEEeCEEEEeeCCCC
Q 018550 102 HEEVLRYLQNFAREFGVDQVVRLHTEVL---------NARLVESNKWKVKSRKKDDVVEEETFDAVVVCNGHFS 166 (354)
Q Consensus 102 ~~~~~~~l~~~~~~~~~~~~v~~~~~v~---------~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlAtG~~s 166 (354)
...+...+.+.+.+.|++ +.++++|+ ++..++ +.+.+.+.++ ++.+|.||+|+|.|+
T Consensus 171 ~~~l~~~L~~~~~~~Gv~--i~~~~~v~~~~g~~~~~~i~~~~-~~v~v~~~~g-----~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 171 PGSLALLAAQQAIGQGAG--LLLNTRAELVPGGVRLHRLTVTN-THQIVVHETR-----QIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHHHHTTTCE--EECSCEEEEETTEEEEECBCC--------CBCCE-----EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCE--EEcCCEEEeccccccccceEeeC-CeEEEEECCc-----EEECCEEEECCCccH
Confidence 366888888888888888 88999999 887655 5565554433 789999999999765
No 158
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.92 E-value=8.7e-09 Score=94.67 Aligned_cols=102 Identities=18% Similarity=0.170 Sum_probs=81.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||+|+.|+.+|..|++.|.+|+++|+.+.+...
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 205 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPS----------------------------------------- 205 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhhh-----------------------------------------
Confidence 468999999999999999999999999999986533100
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEe
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlA 161 (354)
+ . .++.+.+.+.+++.|++ ++++++|.+++.++++...+.+.+|. ++.+|.||+|
T Consensus 206 -~----~--------------~~~~~~l~~~l~~~Gv~--i~~~~~v~~i~~~~~~~~~v~~~~g~----~i~~D~vv~a 260 (450)
T 1ges_A 206 -F----D--------------PMISETLVEVMNAEGPQ--LHTNAIPKAVVKNTDGSLTLELEDGR----SETVDCLIWA 260 (450)
T ss_dssp -S----C--------------HHHHHHHHHHHHHHSCE--EECSCCEEEEEECTTSCEEEEETTSC----EEEESEEEEC
T ss_pred -h----h--------------HHHHHHHHHHHHHCCCE--EEeCCEEEEEEEeCCcEEEEEECCCc----EEEcCEEEEC
Confidence 0 0 56778888888888999 99999999998765234777777664 7899999999
Q ss_pred eCCCCCcccC
Q 018550 162 NGHFSVPRLA 171 (354)
Q Consensus 162 tG~~s~~~~p 171 (354)
+| .+|+..
T Consensus 261 ~G--~~p~~~ 268 (450)
T 1ges_A 261 IG--REPAND 268 (450)
T ss_dssp SC--EEESCT
T ss_pred CC--CCcCCC
Confidence 99 566554
No 159
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.91 E-value=6.9e-09 Score=98.02 Aligned_cols=64 Identities=17% Similarity=0.045 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeec-CCceEEEEeCEEEEeeCCCCC
Q 018550 102 HEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKK-DDVVEEETFDAVVVCNGHFSV 167 (354)
Q Consensus 102 ~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g-~~~~~~~~~d~vIlAtG~~s~ 167 (354)
...+...+.+.+.+.|.. +..+++|+++..+++..+.+.+.+. ++...++.+|.||+|+|.|+.
T Consensus 187 ~~~l~~~l~~~a~~~Ga~--i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~ 251 (571)
T 2rgh_A 187 DARLVIDNIKKAAEDGAY--LVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVD 251 (571)
T ss_dssp HHHHHHHHHHHHHHTTCE--EESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHH
T ss_pred hHHHHHHHHHHHHHcCCe--EEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHH
Confidence 356666677777888998 9999999999987633356766542 222347999999999998753
No 160
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.91 E-value=2.9e-09 Score=99.55 Aligned_cols=61 Identities=26% Similarity=0.313 Sum_probs=48.8
Q ss_pred CCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCc--EEEEEeecCCceEEEEeCEEEEeeCCCCCc
Q 018550 100 PGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNK--WKVKSRKKDDVVEEETFDAVVVCNGHFSVP 168 (354)
Q Consensus 100 ~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~--~~v~~~~g~~~~~~~~~d~vIlAtG~~s~~ 168 (354)
..+..+.+.+.+.+.+.|++ ++++ +|+++..++ +. +.|.+.+|. ++.+|.||.|+|.+|..
T Consensus 170 ~~~~~l~~~L~~~a~~~gv~--~~~~-~v~~i~~~~-~~~~~~v~~~~g~----~~~ad~vV~A~G~~S~~ 232 (511)
T 2weu_A 170 FDADEVARYLSEYAIARGVR--HVVD-DVQHVGQDE-RGWISGVHTKQHG----EISGDLFVDCTGFRGLL 232 (511)
T ss_dssp ECHHHHHHHHHHHHHHTTCE--EEEC-CEEEEEECT-TSCEEEEEESSSC----EEECSEEEECCGGGCCC
T ss_pred EcHHHHHHHHHHHHHHCCCE--EEEC-eEeEEEEcC-CCCEEEEEECCCC----EEEcCEEEECCCcchHH
Confidence 45688999999999888988 8888 999998865 33 556666653 79999999999976654
No 161
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.90 E-value=1.6e-08 Score=93.08 Aligned_cols=104 Identities=19% Similarity=0.237 Sum_probs=81.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||+|+.|+.+|..|++.|.+|+++|+.+.+...
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 208 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSG----------------------------------------- 208 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc-----------------------------------------
Confidence 478999999999999999999999999999987543100
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEe
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlA 161 (354)
.. .++.+.+.+.+++.|++ ++++++|.++..++ +...+.+.+. +...++++|.||+|
T Consensus 209 -----~~--------------~~~~~~l~~~l~~~gv~--i~~~~~v~~i~~~~-~~~~v~~~~~-g~~~~~~~D~vv~a 265 (455)
T 1ebd_A 209 -----FE--------------KQMAAIIKKRLKKKGVE--VVTNALAKGAEERE-DGVTVTYEAN-GETKTIDADYVLVT 265 (455)
T ss_dssp -----SC--------------HHHHHHHHHHHHHTTCE--EEESEEEEEEEEET-TEEEEEEEET-TEEEEEEESEEEEC
T ss_pred -----cC--------------HHHHHHHHHHHHHCCCE--EEeCCEEEEEEEeC-CeEEEEEEeC-CceeEEEcCEEEEC
Confidence 00 66778888888888999 99999999998765 5566665421 11247899999999
Q ss_pred eCCCCCcccC
Q 018550 162 NGHFSVPRLA 171 (354)
Q Consensus 162 tG~~s~~~~p 171 (354)
+| .+|+..
T Consensus 266 ~G--~~p~~~ 273 (455)
T 1ebd_A 266 VG--RRPNTD 273 (455)
T ss_dssp SC--EEESCS
T ss_pred cC--CCcccC
Confidence 99 666654
No 162
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.90 E-value=5.9e-09 Score=98.07 Aligned_cols=62 Identities=21% Similarity=0.278 Sum_probs=48.1
Q ss_pred CCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCC-cEEEEEeecCCceEEEEeCEEEEeeCCCCCc
Q 018550 100 PGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESN-KWKVKSRKKDDVVEEETFDAVVVCNGHFSVP 168 (354)
Q Consensus 100 ~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~-~~~v~~~~g~~~~~~~~~d~vIlAtG~~s~~ 168 (354)
.++..+...+.+.+.+.|++ ++.+ +|+++..++++ .+.|.+.+|. ++.+|.||+|+|.++..
T Consensus 162 i~~~~l~~~L~~~a~~~gv~--~~~~-~v~~i~~~~~g~~~~v~~~~g~----~i~ad~vV~A~G~~s~~ 224 (538)
T 2aqj_A 162 FDAHLVADFLKRWAVERGVN--RVVD-EVVDVRLNNRGYISNLLTKEGR----TLEADLFIDCSGMRGLL 224 (538)
T ss_dssp ECHHHHHHHHHHHHHHTTCE--EEEC-CEEEEEECTTSCEEEEEETTSC----EECCSEEEECCGGGCCC
T ss_pred EeHHHHHHHHHHHHHHCCCE--EEEe-eEeEEEEcCCCcEEEEEECCCc----EEEeCEEEECCCCchhh
Confidence 35588899999999888988 8888 89999886523 2466666653 79999999999976544
No 163
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.90 E-value=5.1e-10 Score=100.68 Aligned_cols=136 Identities=21% Similarity=0.248 Sum_probs=79.6
Q ss_pred CeEEEEcCChHHHHHHHHHHHc--CCcEEEEeeCCCc---cceeecCCCCCCCCCCCCCCCCccccccc-cc-chhc-cc
Q 018550 3 RHVAVIGAGAAGLVVGHELLRE--GHTVVVYEKGEQV---GGSWIYTSETESDPLGVDPNRYPVHSSLY-KS-LRVN-LP 74 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~--g~~v~lie~~~~~---gg~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~-~~ 74 (354)
++|+|||||++|+++|..|+++ |++|+|+|+.+.+ |......++.... ......+ .. +... .+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~ 71 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQH---------PANPLSYLDAPERLNPQF 71 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTC---------TTCGGGGSSCGGGGCCEE
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHh---------hcCcchhhhhhHHHhhcc
Confidence 5899999999999999999999 9999999998766 4443333221110 0000011 00 0000 00
Q ss_pred cccccccCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEE
Q 018550 75 RELMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEET 154 (354)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~ 154 (354)
.....+........ ...........+.++.+.+.+.+.+.+++ ++++++|++++.. . .+.
T Consensus 72 ~~~~~~~~~g~~~~--~~~~~~~~~~~r~~l~~~L~~~~~~~gv~--i~~~~~v~~i~~~------------~----~~~ 131 (381)
T 3c4a_A 72 LEDFKLVHHNEPSL--MSTGVLLCGVERRGLVHALRDKCRSQGIA--IRFESPLLEHGEL------------P----LAD 131 (381)
T ss_dssp ECCEEEEESSSEEE--CCCCSCEEEEEHHHHHHHHHHHHHHTTCE--EETTCCCCSGGGC------------C----GGG
T ss_pred ccceEEEeCCeeEE--ecCCCceeeecHHHHHHHHHHHHHHCCCE--EEeCCEeccchhc------------c----ccc
Confidence 00000000000000 00000001245688999999999888888 9999998877421 0 358
Q ss_pred eCEEEEeeCCCCC
Q 018550 155 FDAVVVCNGHFSV 167 (354)
Q Consensus 155 ~d~vIlAtG~~s~ 167 (354)
+|.||.|+|.+|.
T Consensus 132 ad~vV~AdG~~S~ 144 (381)
T 3c4a_A 132 YDLVVLANGVNHK 144 (381)
T ss_dssp CSEEEECCGGGGG
T ss_pred CCEEEECCCCCch
Confidence 9999999998776
No 164
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.90 E-value=8.9e-09 Score=94.58 Aligned_cols=103 Identities=22% Similarity=0.236 Sum_probs=78.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||+|++|+.+|..|++.|.+|+++|+.+.+....
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~---------------------------------------- 188 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVY---------------------------------------- 188 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCccccccc----------------------------------------
Confidence 3789999999999999999999999999999875331000
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEe
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlA 161 (354)
.. .++.+.+.+.+++.|++ ++++++|.++..++ ..+.+.+ ++. ++++|.||+|
T Consensus 189 -----~~--------------~~~~~~l~~~l~~~gv~--i~~~~~v~~i~~~~-~v~~v~~-~~~----~i~~d~vi~a 241 (447)
T 1nhp_A 189 -----LD--------------KEFTDVLTEEMEANNIT--IATGETVERYEGDG-RVQKVVT-DKN----AYDADLVVVA 241 (447)
T ss_dssp -----CC--------------HHHHHHHHHHHHTTTEE--EEESCCEEEEECSS-BCCEEEE-SSC----EEECSEEEEC
T ss_pred -----CC--------------HHHHHHHHHHHHhCCCE--EEcCCEEEEEEccC-cEEEEEE-CCC----EEECCEEEEC
Confidence 00 66778888888888988 99999999998642 3334554 332 7899999999
Q ss_pred eCCCCCcccCCC
Q 018550 162 NGHFSVPRLAQV 173 (354)
Q Consensus 162 tG~~s~~~~p~~ 173 (354)
+| .+|+.+.+
T Consensus 242 ~G--~~p~~~~~ 251 (447)
T 1nhp_A 242 VG--VRPNTAWL 251 (447)
T ss_dssp SC--EEESCGGG
T ss_pred cC--CCCChHHH
Confidence 99 66665433
No 165
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.89 E-value=8.5e-09 Score=97.87 Aligned_cols=65 Identities=14% Similarity=0.068 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHhC-CcceEEeceEEEEEEEeCCCcEEEEEee-cCCceEEEEeCEEEEeeCCCCCcc
Q 018550 103 EEVLRYLQNFAREFG-VDQVVRLHTEVLNARLVESNKWKVKSRK-KDDVVEEETFDAVVVCNGHFSVPR 169 (354)
Q Consensus 103 ~~~~~~l~~~~~~~~-~~~~v~~~~~v~~i~~~~~~~~~v~~~~-g~~~~~~~~~d~vIlAtG~~s~~~ 169 (354)
..+...+.+.+.+.+ ++ +..+++|+++..+++....+...+ .++....+.++.||+|||.++..+
T Consensus 134 ~~l~~~L~~~~~~~gnv~--i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~~ 200 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQ--RFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVY 200 (602)
T ss_dssp HHHHHHHHHHHTTCTTEE--EEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGGGS
T ss_pred HHHHHHHHHHHHhCCCcE--EEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCcccc
Confidence 467777777776666 77 899999999998762223343332 223335789999999999766544
No 166
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.89 E-value=1.1e-08 Score=97.93 Aligned_cols=63 Identities=11% Similarity=0.149 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEee-cCCceEEEEeCEEEEeeCCCCC
Q 018550 103 EEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRK-KDDVVEEETFDAVVVCNGHFSV 167 (354)
Q Consensus 103 ~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~-g~~~~~~~~~d~vIlAtG~~s~ 167 (354)
..+...+.+.+.+.+++ +..++.|+++..+++....+...+ .++....+.++.||+|||.++.
T Consensus 158 ~~l~~~L~~~a~~~gv~--i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~ 221 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVS--IQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGR 221 (660)
T ss_dssp HHHHHHHHHHHHHHTCE--EECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCCGG
T ss_pred HHHHHHHHHHHHhCCCE--EEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcchh
Confidence 46778888888888998 999999999987652223344432 2233456899999999997654
No 167
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.88 E-value=2.1e-08 Score=92.90 Aligned_cols=106 Identities=28% Similarity=0.420 Sum_probs=81.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||+|+.|+.+|..|++.|.+|+++|+.+.+...+
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~---------------------------------------- 222 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGASM---------------------------------------- 222 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSSS----------------------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcccccc----------------------------------------
Confidence 3689999999999999999999999999999876431100
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEe-CCCcEEEEEeec-CCceEEEEeCEEE
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLV-ESNKWKVKSRKK-DDVVEEETFDAVV 159 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~-~~~~~~v~~~~g-~~~~~~~~~d~vI 159 (354)
. .++.+++.+.+++.|++ ++++++|+++... +++...+.+.+. ++...++.+|.||
T Consensus 223 ------~--------------~~~~~~l~~~l~~~gv~--i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv 280 (478)
T 1v59_A 223 ------D--------------GEVAKATQKFLKKQGLD--FKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLL 280 (478)
T ss_dssp ------C--------------HHHHHHHHHHHHHTTCE--EECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEE
T ss_pred ------C--------------HHHHHHHHHHHHHCCCE--EEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEE
Confidence 0 66778888888889999 9999999999873 215566666521 1112478999999
Q ss_pred EeeCCCCCcccC
Q 018550 160 VCNGHFSVPRLA 171 (354)
Q Consensus 160 lAtG~~s~~~~p 171 (354)
+|+| .+|+..
T Consensus 281 ~a~G--~~p~~~ 290 (478)
T 1v59_A 281 VAVG--RRPYIA 290 (478)
T ss_dssp ECSC--EEECCT
T ss_pred ECCC--CCcCCC
Confidence 9999 666654
No 168
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.86 E-value=8.9e-09 Score=89.25 Aligned_cols=38 Identities=26% Similarity=0.492 Sum_probs=34.9
Q ss_pred CeEEEEcCChHHHHHHHHHHHc--CCcEEEEeeCCCccce
Q 018550 3 RHVAVIGAGAAGLVVGHELLRE--GHTVVVYEKGEQVGGS 40 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~--g~~v~lie~~~~~gg~ 40 (354)
++|+|||||++|+++|..|++. |.+|+|+|+.+.+|+.
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg 105 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGG 105 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTT
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcccccc
Confidence 4899999999999999999998 9999999998887644
No 169
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.86 E-value=6.4e-08 Score=89.91 Aligned_cols=105 Identities=26% Similarity=0.318 Sum_probs=80.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+...+
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~---------------------------------------- 213 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANLQ---------------------------------------- 213 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTCC----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccccC----------------------------------------
Confidence 3689999999999999999999999999999976431000
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEe
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlA 161 (354)
. .++.+.+.+.+++. ++ ++++++|.++..++ +...+...+.+++..++.+|.||+|
T Consensus 214 ------d--------------~~~~~~l~~~l~~~-V~--i~~~~~v~~i~~~~-~~v~v~~~~~~G~~~~i~~D~Vi~a 269 (492)
T 3ic9_A 214 ------D--------------EEMKRYAEKTFNEE-FY--FDAKARVISTIEKE-DAVEVIYFDKSGQKTTESFQYVLAA 269 (492)
T ss_dssp ------C--------------HHHHHHHHHHHHTT-SE--EETTCEEEEEEECS-SSEEEEEECTTCCEEEEEESEEEEC
T ss_pred ------C--------------HHHHHHHHHHHhhC-cE--EEECCEEEEEEEcC-CEEEEEEEeCCCceEEEECCEEEEe
Confidence 0 56677777777665 77 99999999999876 6677776532232358999999999
Q ss_pred eCCCCCcccCC
Q 018550 162 NGHFSVPRLAQ 172 (354)
Q Consensus 162 tG~~s~~~~p~ 172 (354)
+| ..|+...
T Consensus 270 ~G--~~p~~~~ 278 (492)
T 3ic9_A 270 TG--RKANVDK 278 (492)
T ss_dssp SC--CEESCSS
T ss_pred eC--CccCCCC
Confidence 99 6666543
No 170
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.86 E-value=7.4e-09 Score=97.60 Aligned_cols=61 Identities=23% Similarity=0.183 Sum_probs=48.6
Q ss_pred CCHHHHHHHHHHHHHHh-CCcceEEeceEEEEEEEeCCCc--EEEEEeecCCceEEEEeCEEEEeeCCCCCc
Q 018550 100 PGHEEVLRYLQNFAREF-GVDQVVRLHTEVLNARLVESNK--WKVKSRKKDDVVEEETFDAVVVCNGHFSVP 168 (354)
Q Consensus 100 ~~~~~~~~~l~~~~~~~-~~~~~v~~~~~v~~i~~~~~~~--~~v~~~~g~~~~~~~~~d~vIlAtG~~s~~ 168 (354)
..+..+.+.+.+.+.+. |++ ++++ +|+++..++ +. ..|.+.+|. ++.+|.||+|+|.++..
T Consensus 191 ~~~~~l~~~L~~~~~~~~Gv~--i~~~-~V~~i~~~~-~g~~~~v~~~~G~----~i~ad~vI~A~G~~S~~ 254 (550)
T 2e4g_A 191 FDAHLVADFLRRFATEKLGVR--HVED-RVEHVQRDA-NGNIESVRTATGR----VFDADLFVDCSGFRGLL 254 (550)
T ss_dssp ECHHHHHHHHHHHHHHHSCCE--EEEC-CEEEEEECT-TSCEEEEEETTSC----EEECSEEEECCGGGCCC
T ss_pred EcHHHHHHHHHHHHHhcCCcE--EEEC-eEeEEEEcC-CCCEEEEEECCCC----EEECCEEEECCCCchhh
Confidence 45678999999999988 998 8898 999998865 33 456666553 79999999999975543
No 171
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.86 E-value=6.7e-09 Score=102.66 Aligned_cols=58 Identities=21% Similarity=0.234 Sum_probs=47.0
Q ss_pred CHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCc-EEEEEeecCCceEEEEeCEEEEeeCCCC
Q 018550 101 GHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNK-WKVKSRKKDDVVEEETFDAVVVCNGHFS 166 (354)
Q Consensus 101 ~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~-~~v~~~~g~~~~~~~~~d~vIlAtG~~s 166 (354)
+...+...+.+.+.+.|++ ++.+++|+++..++ +. +.+.+.++ ++.+|.||+|+|.|+
T Consensus 149 ~p~~l~~~L~~~a~~~Gv~--i~~~t~V~~i~~~~-~~v~~V~t~~G-----~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 149 SAARAVQLLIKRTESAGVT--YRGSTTVTGIEQSG-GRVTGVQTADG-----VIPADIVVSCAGFWG 207 (830)
T ss_dssp CHHHHHHHHHHHHHHTTCE--EECSCCEEEEEEET-TEEEEEEETTE-----EEECSEEEECCGGGH
T ss_pred cHHHHHHHHHHHHHHcCCE--EECCceEEEEEEeC-CEEEEEEECCc-----EEECCEEEECCccch
Confidence 4467888888888888998 99999999999876 44 34666543 789999999999765
No 172
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.84 E-value=2.7e-08 Score=92.62 Aligned_cols=100 Identities=18% Similarity=0.397 Sum_probs=80.7
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhccccccccccC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (354)
++|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. .
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~---~--------------------------------------- 214 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILR---K--------------------------------------- 214 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCT---T---------------------------------------
T ss_pred CeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCc---c---------------------------------------
Confidence 6899999999999999999999999999998754310 0
Q ss_pred CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEE-EEeCEEEEe
Q 018550 83 YPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEE-ETFDAVVVC 161 (354)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~-~~~d~vIlA 161 (354)
+ . .++.+.+.+.+++.|++ ++++++|.++..++++...+.+.+|+ + +.+|.||+|
T Consensus 215 ~----d--------------~~~~~~l~~~l~~~gv~--i~~~~~v~~i~~~~~~~~~v~~~~g~----~~~~~D~vi~a 270 (500)
T 1onf_A 215 F----D--------------ESVINVLENDMKKNNIN--IVTFADVVEIKKVSDKNLSIHLSDGR----IYEHFDHVIYC 270 (500)
T ss_dssp S----C--------------HHHHHHHHHHHHHTTCE--EECSCCEEEEEESSTTCEEEEETTSC----EEEEESEEEEC
T ss_pred c----c--------------hhhHHHHHHHHHhCCCE--EEECCEEEEEEEcCCceEEEEECCCc----EEEECCEEEEC
Confidence 0 0 66778888888889999 99999999998764244677776654 4 899999999
Q ss_pred eCCCCCccc
Q 018550 162 NGHFSVPRL 170 (354)
Q Consensus 162 tG~~s~~~~ 170 (354)
+| ..|+.
T Consensus 271 ~G--~~p~~ 277 (500)
T 1onf_A 271 VG--RSPDT 277 (500)
T ss_dssp CC--BCCTT
T ss_pred CC--CCcCC
Confidence 99 56665
No 173
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.84 E-value=5.1e-08 Score=90.64 Aligned_cols=105 Identities=25% Similarity=0.298 Sum_probs=83.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+...+
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~---------------------------------------- 237 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGGM---------------------------------------- 237 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSSS----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccccC----------------------------------------
Confidence 3689999999999999999999999999999875431100
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecC-CceEEEEeCEEEE
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKD-DVVEEETFDAVVV 160 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~-~~~~~~~~d~vIl 160 (354)
. .++.+.+.+.+++.|++ ++++++|.++..++ +...+...+.. +...++.+|.||+
T Consensus 238 ------d--------------~~~~~~l~~~l~~~gV~--v~~~~~v~~i~~~~-~~~~v~~~~~~~g~~~~i~~D~Vi~ 294 (491)
T 3urh_A 238 ------D--------------GEVAKQLQRMLTKQGID--FKLGAKVTGAVKSG-DGAKVTFEPVKGGEATTLDAEVVLI 294 (491)
T ss_dssp ------C--------------HHHHHHHHHHHHHTTCE--EECSEEEEEEEEET-TEEEEEEEETTSCCCEEEEESEEEE
T ss_pred ------C--------------HHHHHHHHHHHHhCCCE--EEECCeEEEEEEeC-CEEEEEEEecCCCceEEEEcCEEEE
Confidence 0 67778888888888999 99999999999876 66777776522 2235889999999
Q ss_pred eeCCCCCcccC
Q 018550 161 CNGHFSVPRLA 171 (354)
Q Consensus 161 AtG~~s~~~~p 171 (354)
|+| ..|+..
T Consensus 295 a~G--~~p~~~ 303 (491)
T 3urh_A 295 ATG--RKPSTD 303 (491)
T ss_dssp CCC--CEECCT
T ss_pred eeC--CccCCC
Confidence 999 666554
No 174
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.84 E-value=1.2e-08 Score=92.49 Aligned_cols=101 Identities=21% Similarity=0.301 Sum_probs=81.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.....
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~--------------------------------------- 183 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRVL--------------------------------------- 183 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHHHH---------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchhhc---------------------------------------
Confidence 47899999999999999999999999999998754311000
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEe
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlA 161 (354)
. ..+.+.+.+.+++.|++ ++++++|.++..++ ....+.+.+|. ++++|.||+|
T Consensus 184 ------~--------------~~~~~~l~~~l~~~GV~--i~~~~~v~~i~~~~-~~~~v~~~dg~----~i~aD~Vv~a 236 (410)
T 3ef6_A 184 ------G--------------RRIGAWLRGLLTELGVQ--VELGTGVVGFSGEG-QLEQVMASDGR----SFVADSALIC 236 (410)
T ss_dssp ------C--------------HHHHHHHHHHHHHHTCE--EECSCCEEEEECSS-SCCEEEETTSC----EEECSEEEEC
T ss_pred ------C--------------HHHHHHHHHHHHHCCCE--EEeCCEEEEEeccC-cEEEEEECCCC----EEEcCEEEEe
Confidence 0 66778888888889999 99999999998754 55577777765 8999999999
Q ss_pred eCCCCCccc
Q 018550 162 NGHFSVPRL 170 (354)
Q Consensus 162 tG~~s~~~~ 170 (354)
+| ..|+.
T Consensus 237 ~G--~~p~~ 243 (410)
T 3ef6_A 237 VG--AEPAD 243 (410)
T ss_dssp SC--EEECC
T ss_pred eC--CeecH
Confidence 99 55553
No 175
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.83 E-value=8.9e-09 Score=96.54 Aligned_cols=62 Identities=15% Similarity=0.140 Sum_probs=47.4
Q ss_pred CCHHHHHHHHHHHHHH-hCCcceEEeceEEEEEEEeCCCc-EEEEEeecCCceEEEEeCEEEEeeCCCCCc
Q 018550 100 PGHEEVLRYLQNFARE-FGVDQVVRLHTEVLNARLVESNK-WKVKSRKKDDVVEEETFDAVVVCNGHFSVP 168 (354)
Q Consensus 100 ~~~~~~~~~l~~~~~~-~~~~~~v~~~~~v~~i~~~~~~~-~~v~~~~g~~~~~~~~~d~vIlAtG~~s~~ 168 (354)
..+..+.+.+.+.+.+ .|++ ++++ +|+++..++++. ..+.+.+|. ++.+|+||.|+|.+|..
T Consensus 172 ~~r~~l~~~L~~~a~~~~Gv~--i~~~-~v~~i~~~~~g~~~~v~~~~g~----~i~ad~vV~AdG~~S~~ 235 (526)
T 2pyx_A 172 LNAAKFSQLLTEHCTQKLGVT--HIRD-HVSQIINNQHGDIEKLITKQNG----EISGQLFIDCTGAKSLL 235 (526)
T ss_dssp ECHHHHHHHHHHHHHHTSCCE--EEEC-CEEEEEECTTSCEEEEEESSSC----EEECSEEEECSGGGCCC
T ss_pred EcHHHHHHHHHHHHHhcCCCE--EEEe-EEEEEEecCCCcEEEEEECCCC----EEEcCEEEECCCcchHH
Confidence 3568899999999988 8988 8888 699998865222 355565543 69999999999976543
No 176
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.83 E-value=3.9e-09 Score=97.53 Aligned_cols=41 Identities=29% Similarity=0.472 Sum_probs=37.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcC------CcEEEEeeCCCccceee
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREG------HTVVVYEKGEQVGGSWI 42 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g------~~v~lie~~~~~gg~~~ 42 (354)
+++|+|||||++|+++|+.|+++| ++|+|+|+++.+||...
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~ 51 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQ 51 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEE
Confidence 479999999999999999999999 99999999988887544
No 177
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.83 E-value=2.4e-08 Score=92.01 Aligned_cols=102 Identities=21% Similarity=0.219 Sum_probs=80.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+...
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~----------------------------------------- 204 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQ----------------------------------------- 204 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-----------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccccc-----------------------------------------
Confidence 368999999999999999999999999999986533100
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEe
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlA 161 (354)
+ . .++.+.+.+.+++.|++ ++++++|.+++.++ +...+.+.+|. . ++.+|.||+|
T Consensus 205 -~----~--------------~~~~~~l~~~l~~~gv~--i~~~~~v~~i~~~~-~~~~v~~~~G~--~-~i~~D~vv~a 259 (463)
T 2r9z_A 205 -F----D--------------PLLSATLAENMHAQGIE--THLEFAVAALERDA-QGTTLVAQDGT--R-LEGFDSVIWA 259 (463)
T ss_dssp -S----C--------------HHHHHHHHHHHHHTTCE--EESSCCEEEEEEET-TEEEEEETTCC--E-EEEESEEEEC
T ss_pred -c----C--------------HHHHHHHHHHHHHCCCE--EEeCCEEEEEEEeC-CeEEEEEeCCc--E-EEEcCEEEEC
Confidence 0 0 56677888888888999 99999999998765 45777776552 1 6899999999
Q ss_pred eCCCCCcccC
Q 018550 162 NGHFSVPRLA 171 (354)
Q Consensus 162 tG~~s~~~~p 171 (354)
+| ..|+..
T Consensus 260 ~G--~~p~~~ 267 (463)
T 2r9z_A 260 VG--RAPNTR 267 (463)
T ss_dssp SC--EEESCT
T ss_pred CC--CCcCCC
Confidence 99 566653
No 178
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.83 E-value=3e-08 Score=90.10 Aligned_cols=101 Identities=27% Similarity=0.254 Sum_probs=81.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+....
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~---------------------------------------- 191 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARV---------------------------------------- 191 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhh----------------------------------------
Confidence 4789999999999999999999999999999875331000
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCc-EEEEEeecCCceEEEEeCEEEE
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNK-WKVKSRKKDDVVEEETFDAVVV 160 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~-~~v~~~~g~~~~~~~~~d~vIl 160 (354)
.. ..+.+.+.+.+++.|++ ++++++|.++..++ +. ..+.+.+|. ++.+|.||+
T Consensus 192 -----~~--------------~~~~~~l~~~l~~~GV~--i~~~~~v~~i~~~~-~~v~~v~l~dG~----~i~aD~Vv~ 245 (415)
T 3lxd_A 192 -----AG--------------EALSEFYQAEHRAHGVD--LRTGAAMDCIEGDG-TKVTGVRMQDGS----VIPADIVIV 245 (415)
T ss_dssp -----SC--------------HHHHHHHHHHHHHTTCE--EEETCCEEEEEESS-SBEEEEEESSSC----EEECSEEEE
T ss_pred -----cC--------------HHHHHHHHHHHHhCCCE--EEECCEEEEEEecC-CcEEEEEeCCCC----EEEcCEEEE
Confidence 00 77888888899999999 99999999998765 44 367777765 899999999
Q ss_pred eeCCCCCccc
Q 018550 161 CNGHFSVPRL 170 (354)
Q Consensus 161 AtG~~s~~~~ 170 (354)
|+| ..|+.
T Consensus 246 a~G--~~p~~ 253 (415)
T 3lxd_A 246 GIG--IVPCV 253 (415)
T ss_dssp CSC--CEESC
T ss_pred CCC--CccCh
Confidence 999 55554
No 179
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.82 E-value=5e-08 Score=90.10 Aligned_cols=105 Identities=23% Similarity=0.253 Sum_probs=80.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+...
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 212 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPT----------------------------------------- 212 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-----------------------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccccc-----------------------------------------
Confidence 368999999999999999999999999999987543100
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHH-HHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEE
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFA-REFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVV 160 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIl 160 (354)
.. .++.+.+.+.+ ++.|++ ++++++|.++..++ +...+.+.+.+++..++.+|.||+
T Consensus 213 -----~d--------------~~~~~~l~~~l~~~~gv~--i~~~~~v~~i~~~~-~~~~v~~~~~~g~~~~i~~D~vv~ 270 (468)
T 2qae_A 213 -----LD--------------EDVTNALVGALAKNEKMK--FMTSTKVVGGTNNG-DSVSLEVEGKNGKRETVTCEALLV 270 (468)
T ss_dssp -----SC--------------HHHHHHHHHHHHHHTCCE--EECSCEEEEEEECS-SSEEEEEECC---EEEEEESEEEE
T ss_pred -----CC--------------HHHHHHHHHHHhhcCCcE--EEeCCEEEEEEEcC-CeEEEEEEcCCCceEEEECCEEEE
Confidence 00 66778888888 888999 99999999998765 556676652111124789999999
Q ss_pred eeCCCCCcccC
Q 018550 161 CNGHFSVPRLA 171 (354)
Q Consensus 161 AtG~~s~~~~p 171 (354)
|+| .+|+..
T Consensus 271 a~G--~~p~~~ 279 (468)
T 2qae_A 271 SVG--RRPFTG 279 (468)
T ss_dssp CSC--EEECCT
T ss_pred CCC--cccCCC
Confidence 999 566543
No 180
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.82 E-value=4e-09 Score=98.92 Aligned_cols=38 Identities=42% Similarity=0.587 Sum_probs=32.7
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCcccee
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSW 41 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~ 41 (354)
+||+|||||++|+++|..|++ |.+|+|+||.+..++..
T Consensus 9 ~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~s 46 (540)
T 1chu_A 9 CDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGST 46 (540)
T ss_dssp CSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC---
T ss_pred CCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCCCh
Confidence 689999999999999999999 99999999987665443
No 181
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.81 E-value=2.5e-08 Score=90.26 Aligned_cols=102 Identities=24% Similarity=0.253 Sum_probs=80.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+....
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~---------------------------------------- 181 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARV---------------------------------------- 181 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhc----------------------------------------
Confidence 3689999999999999999999999999999865331000
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEe
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlA 161 (354)
.. ..+.+.+.+.+++.|++ ++++++|.++..+++....+.+.+|. ++.+|.||+|
T Consensus 182 -----~~--------------~~~~~~l~~~l~~~GV~--i~~~~~v~~i~~~~~~v~~V~~~dG~----~i~aD~Vv~a 236 (404)
T 3fg2_P 182 -----VT--------------PEISSYFHDRHSGAGIR--MHYGVRATEIAAEGDRVTGVVLSDGN----TLPCDLVVVG 236 (404)
T ss_dssp -----SC--------------HHHHHHHHHHHHHTTCE--EECSCCEEEEEEETTEEEEEEETTSC----EEECSEEEEC
T ss_pred -----cC--------------HHHHHHHHHHHHhCCcE--EEECCEEEEEEecCCcEEEEEeCCCC----EEEcCEEEEC
Confidence 00 67788888889999999 99999999998765233457777764 8999999999
Q ss_pred eCCCCCccc
Q 018550 162 NGHFSVPRL 170 (354)
Q Consensus 162 tG~~s~~~~ 170 (354)
+| ..|+.
T Consensus 237 ~G--~~p~~ 243 (404)
T 3fg2_P 237 VG--VIPNV 243 (404)
T ss_dssp CC--EEECC
T ss_pred cC--CccCH
Confidence 99 55553
No 182
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.81 E-value=4.7e-08 Score=89.88 Aligned_cols=103 Identities=24% Similarity=0.265 Sum_probs=81.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++++|||+|+.|+.+|..|++.|.+|+++++.+.+....
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~---------------------------------------- 186 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKY---------------------------------------- 186 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT----------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcccccc----------------------------------------
Confidence 3689999999999999999999999999999875431000
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEe
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlA 161 (354)
.. .++.+.+.+.+++.|++ ++++++|.++...+ +...+.+.++ ++.+|.||+|
T Consensus 187 -----~d--------------~~~~~~l~~~l~~~GV~--i~~~~~v~~i~~~~-~~v~v~~~~g-----~i~aD~Vv~A 239 (452)
T 3oc4_A 187 -----FD--------------KEMVAEVQKSLEKQAVI--FHFEETVLGIEETA-NGIVLETSEQ-----EISCDSGIFA 239 (452)
T ss_dssp -----CC--------------HHHHHHHHHHHHTTTEE--EEETCCEEEEEECS-SCEEEEESSC-----EEEESEEEEC
T ss_pred -----CC--------------HHHHHHHHHHHHHcCCE--EEeCCEEEEEEccC-CeEEEEECCC-----EEEeCEEEEC
Confidence 00 67788888888888998 99999999998765 5566666443 7899999999
Q ss_pred eCCCCCcccCCC
Q 018550 162 NGHFSVPRLAQV 173 (354)
Q Consensus 162 tG~~s~~~~p~~ 173 (354)
+| ..|+...+
T Consensus 240 ~G--~~p~~~~l 249 (452)
T 3oc4_A 240 LN--LHPQLAYL 249 (452)
T ss_dssp SC--CBCCCSSC
T ss_pred cC--CCCChHHH
Confidence 99 66665443
No 183
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.80 E-value=3.4e-08 Score=91.66 Aligned_cols=102 Identities=20% Similarity=0.276 Sum_probs=81.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHc---CCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLRE---GHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELM 78 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~---g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (354)
.++++|||+|+.|+.+|..|++. |.+|+++++.+.+...
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~-------------------------------------- 228 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRG-------------------------------------- 228 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTT--------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccc--------------------------------------
Confidence 36899999999999999999999 9999999987543100
Q ss_pred cccCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEE
Q 018550 79 GFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAV 158 (354)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~v 158 (354)
+ . .++.+.+.+.+++.|++ ++++++|.++..++++...+.+.+|. ++.+|.|
T Consensus 229 ----~----d--------------~~~~~~l~~~l~~~GV~--i~~~~~v~~i~~~~~~~~~v~~~~G~----~i~~D~v 280 (490)
T 1fec_A 229 ----F----D--------------SELRKQLTEQLRANGIN--VRTHENPAKVTKNADGTRHVVFESGA----EADYDVV 280 (490)
T ss_dssp ----S----C--------------HHHHHHHHHHHHHTTEE--EEETCCEEEEEECTTSCEEEEETTSC----EEEESEE
T ss_pred ----c----C--------------HHHHHHHHHHHHhCCCE--EEeCCEEEEEEEcCCCEEEEEECCCc----EEEcCEE
Confidence 0 0 66778888888888998 99999999998765334777777664 7999999
Q ss_pred EEeeCCCCCcccC
Q 018550 159 VVCNGHFSVPRLA 171 (354)
Q Consensus 159 IlAtG~~s~~~~p 171 (354)
|+|+| .+|+..
T Consensus 281 v~a~G--~~p~~~ 291 (490)
T 1fec_A 281 MLAIG--RVPRSQ 291 (490)
T ss_dssp EECSC--EEESCT
T ss_pred EEccC--CCcCcc
Confidence 99999 566553
No 184
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.80 E-value=2.3e-09 Score=89.38 Aligned_cols=81 Identities=15% Similarity=0.145 Sum_probs=61.0
Q ss_pred CeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC----------------------------------ccccccCCCC-C
Q 018550 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA----------------------------------DETHEKQPGY-D 242 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~----------------------------------~~~~~~l~~~-~ 242 (354)
..|+|||+|++|+++|..|++.|.+|+++++... ..+.+.+++. +
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~~~~~~~g 83 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAFHARAKYLLEGLRP 83 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHHHHHHHHHHHTCTT
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHHHHHHHHHHHcCCC
Confidence 4699999999999999999999999999998620 0111223343 4
Q ss_pred -CeEEecceeEEecC-Cc---EEEccCcEEecCEEEEcccCC
Q 018550 243 -NMWLHSMVERANED-GT---VVFRNGRVVSADVIMHCTGLT 279 (354)
Q Consensus 243 -~~~~~~~v~~v~~~-~~---v~~~~g~~~~~D~vi~a~G~~ 279 (354)
+++ ++.|+++..+ +. |.+.+|+++.+|.||+|+|..
T Consensus 84 v~i~-~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~ 124 (232)
T 2cul_A 84 LHLF-QATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSF 124 (232)
T ss_dssp EEEE-ECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTC
T ss_pred cEEE-EeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCC
Confidence 555 6788888743 32 566778889999999999994
No 185
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.80 E-value=5e-08 Score=90.02 Aligned_cols=103 Identities=19% Similarity=0.205 Sum_probs=81.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+...
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 209 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPN----------------------------------------- 209 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-----------------------------------------
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccccc-----------------------------------------
Confidence 468999999999999999999999999999987543100
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEe-ecCCceEEEEeCEEEE
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSR-KKDDVVEEETFDAVVV 160 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~-~g~~~~~~~~~d~vIl 160 (354)
.. .++.+++.+.+++.|++ ++++++|.++..++ +...+... +++ ..++.+|.||+
T Consensus 210 -----~~--------------~~~~~~l~~~l~~~gv~--i~~~~~v~~i~~~~-~~~~v~~~~~g~--~~~~~~D~vv~ 265 (464)
T 2a8x_A 210 -----ED--------------ADVSKEIEKQFKKLGVT--ILTATKVESIADGG-SQVTVTVTKDGV--AQELKAEKVLQ 265 (464)
T ss_dssp -----SC--------------HHHHHHHHHHHHHHTCE--EECSCEEEEEEECS-SCEEEEEESSSC--EEEEEESEEEE
T ss_pred -----cC--------------HHHHHHHHHHHHHcCCE--EEeCcEEEEEEEcC-CeEEEEEEcCCc--eEEEEcCEEEE
Confidence 00 66778888888889999 99999999998765 55666664 332 34789999999
Q ss_pred eeCCCCCcccC
Q 018550 161 CNGHFSVPRLA 171 (354)
Q Consensus 161 AtG~~s~~~~p 171 (354)
|+| ..|+..
T Consensus 266 a~G--~~p~~~ 274 (464)
T 2a8x_A 266 AIG--FAPNVE 274 (464)
T ss_dssp CSC--EEECCS
T ss_pred CCC--CCccCC
Confidence 999 566554
No 186
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.79 E-value=3.3e-08 Score=89.58 Aligned_cols=97 Identities=20% Similarity=0.257 Sum_probs=77.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+....
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~---------------------------------------- 184 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRA---------------------------------------- 184 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccccc----------------------------------------
Confidence 3789999999999999999999999999999875331000
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEe
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlA 161 (354)
.. .++.+.+.+.+++.|++ ++++++|.++. + + .+.+.+|. ++++|.||+|
T Consensus 185 -----~~--------------~~~~~~l~~~l~~~GV~--i~~~~~v~~i~--~-~--~v~~~~g~----~i~~D~vi~a 234 (408)
T 2gqw_A 185 -----AP--------------ATLADFVARYHAAQGVD--LRFERSVTGSV--D-G--VVLLDDGT----RIAADMVVVG 234 (408)
T ss_dssp -----SC--------------HHHHHHHHHHHHHTTCE--EEESCCEEEEE--T-T--EEEETTSC----EEECSEEEEC
T ss_pred -----cC--------------HHHHHHHHHHHHHcCcE--EEeCCEEEEEE--C-C--EEEECCCC----EEEcCEEEEC
Confidence 00 66778888888889999 99999999998 3 4 56666654 8999999999
Q ss_pred eCCCCCccc
Q 018550 162 NGHFSVPRL 170 (354)
Q Consensus 162 tG~~s~~~~ 170 (354)
+| ..|+.
T Consensus 235 ~G--~~p~~ 241 (408)
T 2gqw_A 235 IG--VLAND 241 (408)
T ss_dssp SC--EEECC
T ss_pred cC--CCccH
Confidence 99 55543
No 187
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.79 E-value=5.9e-08 Score=89.84 Aligned_cols=104 Identities=25% Similarity=0.342 Sum_probs=83.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+...
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 218 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPA----------------------------------------- 218 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCcc-----------------------------------------
Confidence 368999999999999999999999999999987533100
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEe
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlA 161 (354)
.. .++.+.+.+.+++.|++ ++++++|.++..++ +...+...++++ ..++.+|.||+|
T Consensus 219 -----~~--------------~~~~~~l~~~l~~~Gv~--v~~~~~v~~i~~~~-~~~~v~~~~~~g-~~~~~~D~vi~a 275 (476)
T 3lad_A 219 -----VD--------------EQVAKEAQKILTKQGLK--ILLGARVTGTEVKN-KQVTVKFVDAEG-EKSQAFDKLIVA 275 (476)
T ss_dssp -----SC--------------HHHHHHHHHHHHHTTEE--EEETCEEEEEEECS-SCEEEEEESSSE-EEEEEESEEEEC
T ss_pred -----cC--------------HHHHHHHHHHHHhCCCE--EEECCEEEEEEEcC-CEEEEEEEeCCC-cEEEECCEEEEe
Confidence 00 66778888888888998 99999999999876 667777775433 357899999999
Q ss_pred eCCCCCcccC
Q 018550 162 NGHFSVPRLA 171 (354)
Q Consensus 162 tG~~s~~~~p 171 (354)
+| ..|+..
T Consensus 276 ~G--~~p~~~ 283 (476)
T 3lad_A 276 VG--RRPVTT 283 (476)
T ss_dssp SC--EEECCT
T ss_pred eC--CcccCC
Confidence 99 566553
No 188
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.79 E-value=1.8e-08 Score=92.80 Aligned_cols=102 Identities=23% Similarity=0.256 Sum_probs=78.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||||++|+.+|..|++.|.+|+++|+.+.+...
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 209 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPT----------------------------------------- 209 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT-----------------------------------------
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccccc-----------------------------------------
Confidence 468999999999999999999999999999987643110
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEe
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlA 161 (354)
.. .++.+.+.+.+++.|++ ++++++|++++. + + ..+...+|+ ..++.+|.||+|
T Consensus 210 -----~~--------------~~~~~~l~~~l~~~gv~--i~~~~~v~~i~~-~-~-v~v~~~~G~--~~~i~~D~vv~a 263 (458)
T 1lvl_A 210 -----YD--------------SELTAPVAESLKKLGIA--LHLGHSVEGYEN-G-C-LLANDGKGG--QLRLEADRVLVA 263 (458)
T ss_dssp -----SC--------------HHHHHHHHHHHHHHTCE--EETTCEEEEEET-T-E-EEEECSSSC--CCEECCSCEEEC
T ss_pred -----cC--------------HHHHHHHHHHHHHCCCE--EEECCEEEEEEe-C-C-EEEEECCCc--eEEEECCEEEEC
Confidence 00 66777888888888999 999999999975 3 3 444422231 247899999999
Q ss_pred eCCCCCcccCC
Q 018550 162 NGHFSVPRLAQ 172 (354)
Q Consensus 162 tG~~s~~~~p~ 172 (354)
+| .+|+.+.
T Consensus 264 ~G--~~p~~~~ 272 (458)
T 1lvl_A 264 VG--RRPRTKG 272 (458)
T ss_dssp CC--EEECCSS
T ss_pred cC--CCcCCCC
Confidence 99 6666543
No 189
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.79 E-value=3.5e-08 Score=91.42 Aligned_cols=102 Identities=18% Similarity=0.239 Sum_probs=80.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++++|||+|+.|+.+|..|++.|.+|+++++.+.+...
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 223 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRK----------------------------------------- 223 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccccc-----------------------------------------
Confidence 368999999999999999999999999999987543100
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCC-cEEEEEeecCCceEEEEeCEEEE
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESN-KWKVKSRKKDDVVEEETFDAVVV 160 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~-~~~v~~~~g~~~~~~~~~d~vIl 160 (354)
.. .++.+.+.+.+++.|++ ++++++|+++..++++ ...+.+.+|+ .++.+|.||+
T Consensus 224 -----~d--------------~~~~~~l~~~l~~~Gv~--i~~~~~v~~i~~~~~~~~~~v~~~~G~---~~i~~D~vv~ 279 (479)
T 2hqm_A 224 -----FD--------------ECIQNTITDHYVKEGIN--VHKLSKIVKVEKNVETDKLKIHMNDSK---SIDDVDELIW 279 (479)
T ss_dssp -----SC--------------HHHHHHHHHHHHHHTCE--EECSCCEEEEEECC-CCCEEEEETTSC---EEEEESEEEE
T ss_pred -----cC--------------HHHHHHHHHHHHhCCeE--EEeCCEEEEEEEcCCCcEEEEEECCCc---EEEEcCEEEE
Confidence 00 66778888888888999 9999999999875422 3667776652 3799999999
Q ss_pred eeCCCCCccc
Q 018550 161 CNGHFSVPRL 170 (354)
Q Consensus 161 AtG~~s~~~~ 170 (354)
|+| .+|+.
T Consensus 280 a~G--~~p~~ 287 (479)
T 2hqm_A 280 TIG--RKSHL 287 (479)
T ss_dssp CSC--EEECC
T ss_pred CCC--CCCcc
Confidence 999 56655
No 190
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.79 E-value=4.1e-08 Score=91.24 Aligned_cols=101 Identities=15% Similarity=0.198 Sum_probs=81.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHHc---CCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLRE---GHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELM 78 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~---g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (354)
.++++|||+|+.|+.+|..|++. |.+|+++++.+.+...
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~-------------------------------------- 232 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRG-------------------------------------- 232 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTT--------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccc--------------------------------------
Confidence 36899999999999999999999 9999999987533100
Q ss_pred cccCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEE
Q 018550 79 GFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAV 158 (354)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~v 158 (354)
+ . .++.+.+.+.+++.|++ ++++++|.++..++++...+.+.+|. ++++|.|
T Consensus 233 ----~----d--------------~~~~~~l~~~l~~~GV~--i~~~~~v~~i~~~~~~~~~v~~~~G~----~i~~D~v 284 (495)
T 2wpf_A 233 ----F----D--------------ETIREEVTKQLTANGIE--IMTNENPAKVSLNTDGSKHVTFESGK----TLDVDVV 284 (495)
T ss_dssp ----S----C--------------HHHHHHHHHHHHHTTCE--EEESCCEEEEEECTTSCEEEEETTSC----EEEESEE
T ss_pred ----c----C--------------HHHHHHHHHHHHhCCCE--EEeCCEEEEEEEcCCceEEEEECCCc----EEEcCEE
Confidence 0 0 66778888888889999 99999999998765344777777664 7999999
Q ss_pred EEeeCCCCCccc
Q 018550 159 VVCNGHFSVPRL 170 (354)
Q Consensus 159 IlAtG~~s~~~~ 170 (354)
|+|+| .+|+.
T Consensus 285 v~a~G--~~p~~ 294 (495)
T 2wpf_A 285 MMAIG--RIPRT 294 (495)
T ss_dssp EECSC--EEECC
T ss_pred EECCC--Ccccc
Confidence 99999 56654
No 191
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.78 E-value=4e-08 Score=90.84 Aligned_cols=105 Identities=24% Similarity=0.285 Sum_probs=81.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+...
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~----------------------------------------- 215 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPT----------------------------------------- 215 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc-----------------------------------------
Confidence 468999999999999999999999999999987543100
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeec-CCceEEEEeCEEEE
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKK-DDVVEEETFDAVVV 160 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g-~~~~~~~~~d~vIl 160 (354)
.. .++.+.+.+.+++.|++ ++++++|.++..++ +...+.+.+. ++...++.+|.||+
T Consensus 216 -----~~--------------~~~~~~l~~~l~~~gv~--i~~~~~v~~i~~~~-~~~~v~~~~~~~g~~~~~~~D~vv~ 273 (470)
T 1dxl_A 216 -----MD--------------AEIRKQFQRSLEKQGMK--FKLKTKVVGVDTSG-DGVKLTVEPSAGGEQTIIEADVVLV 273 (470)
T ss_dssp -----SC--------------HHHHHHHHHHHHHSSCC--EECSEEEEEEECSS-SSEEEEEEESSSCCCEEEEESEEEC
T ss_pred -----cc--------------HHHHHHHHHHHHHcCCE--EEeCCEEEEEEEcC-CeEEEEEEecCCCcceEEECCEEEE
Confidence 00 67778888888889999 99999999998765 5566666521 11124789999999
Q ss_pred eeCCCCCcccC
Q 018550 161 CNGHFSVPRLA 171 (354)
Q Consensus 161 AtG~~s~~~~p 171 (354)
|+| ..|+..
T Consensus 274 a~G--~~p~~~ 282 (470)
T 1dxl_A 274 SAG--RTPFTS 282 (470)
T ss_dssp CCC--EEECCT
T ss_pred CCC--CCcCCC
Confidence 999 566543
No 192
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.78 E-value=2.1e-08 Score=93.02 Aligned_cols=101 Identities=21% Similarity=0.243 Sum_probs=80.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||||+.|+.+|..|++.|.+|+++|+.+.+...
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~----------------------------------------- 223 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQG----------------------------------------- 223 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc-----------------------------------------
Confidence 468999999999999999999999999999987543100
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEee----cCCceEEEEeCE
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRK----KDDVVEEETFDA 157 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~----g~~~~~~~~~d~ 157 (354)
.. .++.+.+.+.+++.|++ ++++++|.+++.++ +...+.+.+ +. ++.+|.
T Consensus 224 -----~~--------------~~~~~~l~~~l~~~gV~--i~~~~~v~~i~~~~-~~~~v~~~~~~~~g~----~~~~D~ 277 (482)
T 1ojt_A 224 -----AD--------------RDLVKVWQKQNEYRFDN--IMVNTKTVAVEPKE-DGVYVTFEGANAPKE----PQRYDA 277 (482)
T ss_dssp -----SC--------------HHHHHHHHHHHGGGEEE--EECSCEEEEEEEET-TEEEEEEESSSCCSS----CEEESC
T ss_pred -----cC--------------HHHHHHHHHHHHhcCCE--EEECCEEEEEEEcC-CeEEEEEeccCCCce----EEEcCE
Confidence 00 66778888888888888 99999999998766 556677665 32 678999
Q ss_pred EEEeeCCCCCcccC
Q 018550 158 VVVCNGHFSVPRLA 171 (354)
Q Consensus 158 vIlAtG~~s~~~~p 171 (354)
||+|+| .+|+..
T Consensus 278 vv~a~G--~~p~~~ 289 (482)
T 1ojt_A 278 VLVAAG--RAPNGK 289 (482)
T ss_dssp EEECCC--EEECGG
T ss_pred EEECcC--CCcCCC
Confidence 999999 666553
No 193
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.78 E-value=4.4e-08 Score=90.65 Aligned_cols=106 Identities=27% Similarity=0.333 Sum_probs=80.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+... .
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~--~-------------------------------------- 217 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGV--G-------------------------------------- 217 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCS--S--------------------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCc--c--------------------------------------
Confidence 368999999999999999999999999999987543100 0
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCc-EEEEEeec-CCceEEEEeCEEE
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNK-WKVKSRKK-DDVVEEETFDAVV 159 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~-~~v~~~~g-~~~~~~~~~d~vI 159 (354)
.. .++.+.+.+.+++.|++ ++++++|.++..++ +. ..+...+. .+...++++|.||
T Consensus 218 -----~~--------------~~~~~~l~~~l~~~Gv~--i~~~~~v~~i~~~~-~~~~~v~~~~~~~~~~~~i~~D~vv 275 (474)
T 1zmd_A 218 -----ID--------------MEISKNFQRILQKQGFK--FKLNTKVTGATKKS-DGKIDVSIEAASGGKAEVITCDVLL 275 (474)
T ss_dssp -----CC--------------HHHHHHHHHHHHHTTCE--EECSEEEEEEEECT-TSCEEEEEEETTSCCCEEEEESEEE
T ss_pred -----cC--------------HHHHHHHHHHHHHCCCE--EEeCceEEEEEEcC-CceEEEEEEecCCCCceEEEcCEEE
Confidence 00 67778888888889999 99999999998765 44 66665320 0112478999999
Q ss_pred EeeCCCCCcccC
Q 018550 160 VCNGHFSVPRLA 171 (354)
Q Consensus 160 lAtG~~s~~~~p 171 (354)
+|+| .+|+..
T Consensus 276 ~a~G--~~p~~~ 285 (474)
T 1zmd_A 276 VCIG--RRPFTK 285 (474)
T ss_dssp ECSC--EEECCT
T ss_pred ECcC--CCcCCC
Confidence 9999 566544
No 194
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.78 E-value=3.9e-08 Score=89.74 Aligned_cols=100 Identities=24% Similarity=0.321 Sum_probs=78.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+....
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~---------------------------------------- 188 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERV---------------------------------------- 188 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccch----------------------------------------
Confidence 3689999999999999999999999999999865321000
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEE--eCCCcE-EEEEeecCCceEEEEeCEE
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARL--VESNKW-KVKSRKKDDVVEEETFDAV 158 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~--~~~~~~-~v~~~~g~~~~~~~~~d~v 158 (354)
.. .++.+.+.+.+++.|++ ++++++|.++.. .+ +.. .+.+.+|. ++.+|.|
T Consensus 189 -----~~--------------~~~~~~l~~~l~~~GV~--i~~~~~v~~i~~~~~~-~~v~~v~~~~G~----~i~~D~V 242 (431)
T 1q1r_A 189 -----TA--------------PPVSAFYEHLHREAGVD--IRTGTQVCGFEMSTDQ-QKVTAVLCEDGT----RLPADLV 242 (431)
T ss_dssp -----SC--------------HHHHHHHHHHHHHHTCE--EECSCCEEEEEECTTT-CCEEEEEETTSC----EEECSEE
T ss_pred -----hh--------------HHHHHHHHHHHHhCCeE--EEeCCEEEEEEeccCC-CcEEEEEeCCCC----EEEcCEE
Confidence 00 66777888888888999 999999999987 33 333 67776664 7899999
Q ss_pred EEeeCCCCCcc
Q 018550 159 VVCNGHFSVPR 169 (354)
Q Consensus 159 IlAtG~~s~~~ 169 (354)
|+|+| .+|+
T Consensus 243 v~a~G--~~p~ 251 (431)
T 1q1r_A 243 IAGIG--LIPN 251 (431)
T ss_dssp EECCC--EEEC
T ss_pred EECCC--CCcC
Confidence 99999 5554
No 195
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.76 E-value=8.3e-09 Score=94.83 Aligned_cols=59 Identities=22% Similarity=0.246 Sum_probs=46.1
Q ss_pred CHHHHHHHHHHHHHHhCCcceEEeceEEEEEEE---------------eCCCc-EEEEEeecCCceEEE--EeCEEEEee
Q 018550 101 GHEEVLRYLQNFAREFGVDQVVRLHTEVLNARL---------------VESNK-WKVKSRKKDDVVEEE--TFDAVVVCN 162 (354)
Q Consensus 101 ~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~---------------~~~~~-~~v~~~~g~~~~~~~--~~d~vIlAt 162 (354)
+...+...+.+.+.+.|++ ++.+++|+++.. .+ +. +.+.+.++ ++ .+|.||+|+
T Consensus 179 ~~~~l~~~L~~~~~~~Gv~--i~~~~~V~~i~~~~~~~~~~~~~~~~~~~-~~v~~V~t~~g-----~i~~~Ad~VV~At 250 (448)
T 3axb_A 179 DAEKVVDYYYRRASGAGVE--FIFGRRVVGVELKPRVELGIEGEPLPWQE-ARASAAVLSDG-----TRVEVGEKLVVAA 250 (448)
T ss_dssp CHHHHHHHHHHHHHHTTCE--EEESCCEEEEEEEESSCCCCTTSSCTTSC-EEEEEEEETTS-----CEEEEEEEEEECC
T ss_pred cHHHHHHHHHHHHHhCCCE--EEcCCeEEEEEecccccccccccccccCC-CceEEEEeCCC-----EEeecCCEEEECC
Confidence 4468888888888888998 999999999987 33 33 45666544 57 999999999
Q ss_pred CCCCC
Q 018550 163 GHFSV 167 (354)
Q Consensus 163 G~~s~ 167 (354)
|.|+.
T Consensus 251 G~~s~ 255 (448)
T 3axb_A 251 GVWSN 255 (448)
T ss_dssp GGGHH
T ss_pred CcCHH
Confidence 97654
No 196
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.76 E-value=5.7e-08 Score=89.82 Aligned_cols=100 Identities=20% Similarity=0.231 Sum_probs=81.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHHc-CCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLRE-GHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGF 80 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~-g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (354)
.++|+|||+|+.|+.+|..|++. |.+|+++++.+.+...
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~---------------------------------------- 198 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPG---------------------------------------- 198 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTT----------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCccccc----------------------------------------
Confidence 36899999999999999999999 9999999986532100
Q ss_pred cCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEE
Q 018550 81 QAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVV 160 (354)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIl 160 (354)
. .. .++.+.+.+.+++.|++ ++++++|.++..++ +...+.+.++. ++.+|.||+
T Consensus 199 ----~-~~--------------~~~~~~l~~~l~~~GV~--i~~~~~v~~i~~~~-~~v~v~~~~g~----~i~aD~Vv~ 252 (472)
T 3iwa_A 199 ----F-TS--------------KSLSQMLRHDLEKNDVV--VHTGEKVVRLEGEN-GKVARVITDKR----TLDADLVIL 252 (472)
T ss_dssp ----T-SC--------------HHHHHHHHHHHHHTTCE--EECSCCEEEEEESS-SBEEEEEESSC----EEECSEEEE
T ss_pred ----c-cC--------------HHHHHHHHHHHHhcCCE--EEeCCEEEEEEccC-CeEEEEEeCCC----EEEcCEEEE
Confidence 0 00 67788888888889999 99999999998755 66777777764 899999999
Q ss_pred eeCCCCCcc
Q 018550 161 CNGHFSVPR 169 (354)
Q Consensus 161 AtG~~s~~~ 169 (354)
|+| ..|+
T Consensus 253 a~G--~~p~ 259 (472)
T 3iwa_A 253 AAG--VSPN 259 (472)
T ss_dssp CSC--EEEC
T ss_pred CCC--CCcC
Confidence 999 5554
No 197
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.76 E-value=7.2e-08 Score=89.76 Aligned_cols=101 Identities=18% Similarity=0.141 Sum_probs=81.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++++|||+|+.|+.+|..|.+.|.+|+++++.+.+...
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 220 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPY----------------------------------------- 220 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCC-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc-----------------------------------------
Confidence 368999999999999999999999999999987543100
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEe
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlA 161 (354)
.. .++.+.+.+.+++.|++ ++++++|.++..++ +...+...++. ++.+|.||+|
T Consensus 221 -----~d--------------~~~~~~l~~~l~~~GV~--i~~~~~V~~i~~~~-~~v~v~~~~g~----~i~aD~Vv~a 274 (499)
T 1xdi_A 221 -----ED--------------ADAALVLEESFAERGVR--LFKNARAASVTRTG-AGVLVTMTDGR----TVEGSHALMT 274 (499)
T ss_dssp -----SS--------------HHHHHHHHHHHHHTTCE--EETTCCEEEEEECS-SSEEEEETTSC----EEEESEEEEC
T ss_pred -----cC--------------HHHHHHHHHHHHHCCCE--EEeCCEEEEEEEeC-CEEEEEECCCc----EEEcCEEEEC
Confidence 00 67788888888899999 99999999998765 55666655543 7999999999
Q ss_pred eCCCCCcccC
Q 018550 162 NGHFSVPRLA 171 (354)
Q Consensus 162 tG~~s~~~~p 171 (354)
+| .+|+..
T Consensus 275 ~G--~~p~~~ 282 (499)
T 1xdi_A 275 IG--SVPNTS 282 (499)
T ss_dssp CC--EEECCS
T ss_pred CC--CCcCCC
Confidence 99 566553
No 198
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.75 E-value=6.1e-08 Score=89.80 Aligned_cols=99 Identities=23% Similarity=0.365 Sum_probs=76.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+...
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 224 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGTI----------------------------------------- 224 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTSS-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhhc-----------------------------------------
Confidence 478999999999999999999999999999986532110
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEe
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlA 161 (354)
+ . .++.+.+.+.+++.|++ ++++++|.++..++ +.+.+.+.+ .++++|.||+|
T Consensus 225 -~----~--------------~~~~~~l~~~l~~~Gv~--i~~~~~v~~i~~~~-~v~~v~~~~-----~~i~~D~vi~a 277 (480)
T 3cgb_A 225 -Y----D--------------GDMAEYIYKEADKHHIE--ILTNENVKAFKGNE-RVEAVETDK-----GTYKADLVLVS 277 (480)
T ss_dssp -S----C--------------HHHHHHHHHHHHHTTCE--EECSCCEEEEEESS-BEEEEEETT-----EEEECSEEEEC
T ss_pred -C----C--------------HHHHHHHHHHHHHcCcE--EEcCCEEEEEEcCC-cEEEEEECC-----CEEEcCEEEEC
Confidence 0 0 66778888888889999 99999999998643 333344432 27899999999
Q ss_pred eCCCCCccc
Q 018550 162 NGHFSVPRL 170 (354)
Q Consensus 162 tG~~s~~~~ 170 (354)
+| ..|+.
T Consensus 278 ~G--~~p~~ 284 (480)
T 3cgb_A 278 VG--VKPNT 284 (480)
T ss_dssp SC--EEESC
T ss_pred cC--CCcCh
Confidence 99 55554
No 199
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.75 E-value=6.3e-08 Score=89.43 Aligned_cols=98 Identities=19% Similarity=0.265 Sum_probs=79.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. .
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~---~-------------------------------------- 214 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR---E-------------------------------------- 214 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT---S--------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC---C--------------------------------------
Confidence 36899999999999999999999999999998653310 0
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEe
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlA 161 (354)
. .++.+.+.+.+++.|++ ++++++|.++..++ +.+.+.+.+ .++.+|.||+|
T Consensus 215 ------~--------------~~~~~~l~~~l~~~Gv~--i~~~~~v~~i~~~~-~~~~v~~~~-----~~i~aD~Vv~a 266 (467)
T 1zk7_A 215 ------D--------------PAIGEAVTAAFRAEGIE--VLEHTQASQVAHMD-GEFVLTTTH-----GELRADKLLVA 266 (467)
T ss_dssp ------C--------------HHHHHHHHHHHHHTTCE--EETTCCEEEEEEET-TEEEEEETT-----EEEEESEEEEC
T ss_pred ------C--------------HHHHHHHHHHHHhCCCE--EEcCCEEEEEEEeC-CEEEEEECC-----cEEEcCEEEEC
Confidence 0 66778888888889999 99999999998765 556666542 37899999999
Q ss_pred eCCCCCccc
Q 018550 162 NGHFSVPRL 170 (354)
Q Consensus 162 tG~~s~~~~ 170 (354)
+| .+|..
T Consensus 267 ~G--~~p~~ 273 (467)
T 1zk7_A 267 TG--RTPNT 273 (467)
T ss_dssp SC--EEESC
T ss_pred CC--CCcCC
Confidence 99 55554
No 200
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.74 E-value=6.2e-08 Score=89.08 Aligned_cols=102 Identities=20% Similarity=0.259 Sum_probs=78.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+....
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~---------------------------------------- 188 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYKY---------------------------------------- 188 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTTT----------------------------------------
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhhh----------------------------------------
Confidence 3689999999999999999999999999999865331000
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEe
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlA 161 (354)
.. .++.+.+.+.+++.|++ ++++++|+++...+ +.......++. ++.+|.||+|
T Consensus 189 -----~~--------------~~~~~~l~~~l~~~Gv~--i~~~~~v~~i~~~~-~~v~~v~~~g~----~i~~D~vv~a 242 (452)
T 2cdu_A 189 -----FD--------------KEFTDILAKDYEAHGVN--LVLGSKVAAFEEVD-DEIITKTLDGK----EIKSDIAILC 242 (452)
T ss_dssp -----SC--------------HHHHHHHHHHHHHTTCE--EEESSCEEEEEEET-TEEEEEETTSC----EEEESEEEEC
T ss_pred -----hh--------------hhHHHHHHHHHHHCCCE--EEcCCeeEEEEcCC-CeEEEEEeCCC----EEECCEEEEC
Confidence 00 67778888888899999 99999999998654 44432222443 7899999999
Q ss_pred eCCCCCcccC
Q 018550 162 NGHFSVPRLA 171 (354)
Q Consensus 162 tG~~s~~~~p 171 (354)
+| ..|+..
T Consensus 243 ~G--~~p~~~ 250 (452)
T 2cdu_A 243 IG--FRPNTE 250 (452)
T ss_dssp CC--EEECCG
T ss_pred cC--CCCCHH
Confidence 99 566544
No 201
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.74 E-value=7.9e-08 Score=89.80 Aligned_cols=100 Identities=18% Similarity=0.118 Sum_probs=82.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
+++++|||||+.|+.+|..+++.|.+|+++++...+ .
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L----~--------------------------------------- 259 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVL----R--------------------------------------- 259 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSS----T---------------------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHhcCCeEEEecccccc----c---------------------------------------
Confidence 478999999999999999999999999999874211 0
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEe
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlA 161 (354)
..+ .++.+.+.+.+++.++. ++++..+.++...+ +...+...++. ++.+|.|++|
T Consensus 260 ---~~D---------------~ei~~~l~~~l~~~gi~--~~~~~~v~~~~~~~-~~~~v~~~~~~----~~~~D~vLvA 314 (542)
T 4b1b_A 260 ---GFD---------------QQCAVKVKLYMEEQGVM--FKNGILPKKLTKMD-DKILVEFSDKT----SELYDTVLYA 314 (542)
T ss_dssp ---TSC---------------HHHHHHHHHHHHHTTCE--EEETCCEEEEEEET-TEEEEEETTSC----EEEESEEEEC
T ss_pred ---ccc---------------hhHHHHHHHHHHhhcce--eecceEEEEEEecC-CeEEEEEcCCC----eEEEEEEEEc
Confidence 000 77888899999999998 99999999999887 77777777664 7789999999
Q ss_pred eCCCCCcccC
Q 018550 162 NGHFSVPRLA 171 (354)
Q Consensus 162 tG~~s~~~~p 171 (354)
+| .+|+..
T Consensus 315 vG--R~Pnt~ 322 (542)
T 4b1b_A 315 IG--RKGDID 322 (542)
T ss_dssp SC--EEESCG
T ss_pred cc--ccCCcc
Confidence 99 555543
No 202
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.73 E-value=8.9e-08 Score=88.81 Aligned_cols=101 Identities=16% Similarity=0.289 Sum_probs=82.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++++|||+|+.|+.+|..|++.|.+|+++++.+.+...
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~----------------------------------------- 229 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILRN----------------------------------------- 229 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-----------------------------------------
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccccc-----------------------------------------
Confidence 468999999999999999999999999999986533100
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEe
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlA 161 (354)
+ . .++.+.+.+.+++.|++ ++++++|.++..++ +.+.+.+.++. ++.+|.||+|
T Consensus 230 -~----~--------------~~~~~~l~~~l~~~Gv~--i~~~~~V~~i~~~~-~~v~v~~~~g~----~i~aD~Vi~A 283 (484)
T 3o0h_A 230 -F----D--------------YDLRQLLNDAMVAKGIS--IIYEATVSQVQSTE-NCYNVVLTNGQ----TICADRVMLA 283 (484)
T ss_dssp -S----C--------------HHHHHHHHHHHHHHTCE--EESSCCEEEEEECS-SSEEEEETTSC----EEEESEEEEC
T ss_pred -c----C--------------HHHHHHHHHHHHHCCCE--EEeCCEEEEEEeeC-CEEEEEECCCc----EEEcCEEEEe
Confidence 0 0 66778888888888999 99999999999876 66788887764 8999999999
Q ss_pred eCCCCCcccC
Q 018550 162 NGHFSVPRLA 171 (354)
Q Consensus 162 tG~~s~~~~p 171 (354)
+| ..|...
T Consensus 284 ~G--~~p~~~ 291 (484)
T 3o0h_A 284 TG--RVPNTT 291 (484)
T ss_dssp CC--EEECCT
T ss_pred eC--CCcCCC
Confidence 99 555544
No 203
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.72 E-value=5.8e-08 Score=90.18 Aligned_cols=101 Identities=21% Similarity=0.327 Sum_probs=77.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+....
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~---------------------------------------- 233 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGY---------------------------------------- 233 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT----------------------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhhH----------------------------------------
Confidence 3689999999999999999999999999999875331000
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEe
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlA 161 (354)
.. .++.+.+.+.+++.|++ ++++++|+++..++ ....+.+ ++. ++++|.||+|
T Consensus 234 -----~~--------------~~~~~~l~~~l~~~GV~--i~~~~~v~~i~~~~-~v~~v~~-~g~----~i~~D~Vi~a 286 (490)
T 2bc0_A 234 -----YD--------------RDLTDLMAKNMEEHGIQ--LAFGETVKEVAGNG-KVEKIIT-DKN----EYDVDMVILA 286 (490)
T ss_dssp -----SC--------------HHHHHHHHHHHHTTTCE--EEETCCEEEEECSS-SCCEEEE-SSC----EEECSEEEEC
T ss_pred -----HH--------------HHHHHHHHHHHHhCCeE--EEeCCEEEEEEcCC-cEEEEEE-CCc----EEECCEEEEC
Confidence 00 67778888888888999 99999999998632 2223444 443 7999999999
Q ss_pred eCCCCCcccC
Q 018550 162 NGHFSVPRLA 171 (354)
Q Consensus 162 tG~~s~~~~p 171 (354)
+| .+|+.+
T Consensus 287 ~G--~~p~~~ 294 (490)
T 2bc0_A 287 VG--FRPNTT 294 (490)
T ss_dssp CC--EEECCG
T ss_pred CC--CCcChH
Confidence 99 666554
No 204
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.71 E-value=1.1e-07 Score=88.90 Aligned_cols=101 Identities=17% Similarity=0.189 Sum_probs=79.9
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhccccccccccC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (354)
++++|||+|+.|+.+|..|++.|.+|+++++.+.+...
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~------------------------------------------ 252 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLI------------------------------------------ 252 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTC------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccccc------------------------------------------
Confidence 78999999999999999999999999999987533100
Q ss_pred CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCc---EEEEEeecCCceEEEEeCEEE
Q 018550 83 YPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNK---WKVKSRKKDDVVEEETFDAVV 159 (354)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~---~~v~~~~g~~~~~~~~~d~vI 159 (354)
.. .++.+.+.+.+++.|++ ++++++|+++..++++. +.+.+.+|. .++.+|.||
T Consensus 253 ----~~--------------~~~~~~l~~~l~~~GV~--i~~~~~V~~i~~~~~~~v~~~~v~~~~G~---~~i~aD~Vv 309 (523)
T 1mo9_A 253 ----KD--------------NETRAYVLDRMKEQGME--IISGSNVTRIEEDANGRVQAVVAMTPNGE---MRIETDFVF 309 (523)
T ss_dssp ----CS--------------HHHHHHHHHHHHHTTCE--EESSCEEEEEEECTTSBEEEEEEEETTEE---EEEECSCEE
T ss_pred ----cc--------------HHHHHHHHHHHHhCCcE--EEECCEEEEEEEcCCCceEEEEEEECCCc---EEEEcCEEE
Confidence 00 67788888888889999 99999999998765232 566665541 378999999
Q ss_pred EeeCCCCCccc
Q 018550 160 VCNGHFSVPRL 170 (354)
Q Consensus 160 lAtG~~s~~~~ 170 (354)
+|+| .+|+.
T Consensus 310 ~A~G--~~p~~ 318 (523)
T 1mo9_A 310 LGLG--EQPRS 318 (523)
T ss_dssp ECCC--CEECC
T ss_pred ECcC--CccCC
Confidence 9999 55554
No 205
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.70 E-value=2.7e-07 Score=85.49 Aligned_cols=104 Identities=20% Similarity=0.219 Sum_probs=82.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++++|||+|+.|+.+|..|++.|.+|+++++.. + ..
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~----l~-------------------------------------- 223 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSI-V----LR-------------------------------------- 223 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC-S----ST--------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC-C----Cc--------------------------------------
Confidence 3689999999999999999999999999998742 1 00
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecC-CceEEEEeCEEEE
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKD-DVVEEETFDAVVV 160 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~-~~~~~~~~d~vIl 160 (354)
.+ . .++.+.+.+.+++.|++ ++++++|.++...+++...++..++. +...++.+|.||+
T Consensus 224 ~~----d--------------~~~~~~l~~~l~~~Gv~--i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~ 283 (483)
T 3dgh_A 224 GF----D--------------QQMAELVAASMEERGIP--FLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLW 283 (483)
T ss_dssp TS----C--------------HHHHHHHHHHHHHTTCC--EEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEE
T ss_pred cc----C--------------HHHHHHHHHHHHhCCCE--EEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEE
Confidence 00 0 67788888888889999 99999999999865355777777754 3346899999999
Q ss_pred eeCCCCCccc
Q 018550 161 CNGHFSVPRL 170 (354)
Q Consensus 161 AtG~~s~~~~ 170 (354)
|+| ..|+.
T Consensus 284 a~G--~~p~~ 291 (483)
T 3dgh_A 284 AIG--RKGLV 291 (483)
T ss_dssp CSC--EEECC
T ss_pred Ccc--cccCc
Confidence 999 55554
No 206
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.70 E-value=5.4e-08 Score=93.18 Aligned_cols=67 Identities=9% Similarity=-0.023 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHh-CC-cceEEeceEEEEEEEeCC---CcEEEEEee-cCCceEEEEeCEEEEeeCCCCCcccC
Q 018550 103 EEVLRYLQNFAREF-GV-DQVVRLHTEVLNARLVES---NKWKVKSRK-KDDVVEEETFDAVVVCNGHFSVPRLA 171 (354)
Q Consensus 103 ~~~~~~l~~~~~~~-~~-~~~v~~~~~v~~i~~~~~---~~~~v~~~~-g~~~~~~~~~d~vIlAtG~~s~~~~p 171 (354)
..+...+.+.+.+. ++ + +..++.|+++..+++ ....+...+ .++....+.++.||+|||.++....|
T Consensus 151 ~~~~~~l~~~~~~~~gv~~--i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~~~y~~ 223 (643)
T 1jnr_A 151 ESYKPIIAEAAKMAVGEEN--IYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATLLFRP 223 (643)
T ss_dssp TTHHHHHHHHHHHHHCGGG--EECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSSSCC
T ss_pred HHHHHHHHHHHHhcCCCcE--EEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCcccccccC
Confidence 34666777777776 88 8 999999999988653 222333322 22233578999999999987664444
No 207
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.69 E-value=1.1e-07 Score=87.57 Aligned_cols=85 Identities=18% Similarity=0.220 Sum_probs=51.3
Q ss_pred hCCcceEEeceEEEEEEEeCCCcEEEEEeec-CCceEEEEeCEEEEeeCCCCCcc--cCCCCCCCCCCcceeecccCCCC
Q 018550 116 FGVDQVVRLHTEVLNARLVESNKWKVKSRKK-DDVVEEETFDAVVVCNGHFSVPR--LAQVPGIDSWPGKQMHSHNYRIP 192 (354)
Q Consensus 116 ~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g-~~~~~~~~~d~vIlAtG~~s~~~--~p~~~g~~~~~~~~~~~~~~~~~ 192 (354)
.+++ +.++++|+++..++ +.+.+++.+. ++...++.+|.||+||| ..|+ .+.+.++....+.+.....++..
T Consensus 329 ~~v~--i~~~~~v~~v~~~~-~~~~v~~~~~~~g~~~~~~~D~Vv~AtG--~~p~~~~~~l~~l~~~~g~i~v~~~~~~~ 403 (463)
T 3s5w_A 329 PRHA--FRCMTTVERATATA-QGIELALRDAGSGELSVETYDAVILATG--YERQLHRQLLEPLAEYLGDHEIGRDYRLQ 403 (463)
T ss_dssp CCSE--EETTEEEEEEEEET-TEEEEEEEETTTCCEEEEEESEEEECCC--EECCC-CTTTGGGGGGBC--CCCTTSBCC
T ss_pred CCeE--EEeCCEEEEEEecC-CEEEEEEEEcCCCCeEEEECCEEEEeeC--CCCCCccchhHHHHHHhCCcccCcccccc
Confidence 3666 99999999999877 7888888743 23345799999999999 5555 33344333211222222222211
Q ss_pred -CCCCCCeEEEEcc
Q 018550 193 -NPFQDQVVILIGH 205 (354)
Q Consensus 193 -~~~~~~~v~ViG~ 205 (354)
......+|.++|.
T Consensus 404 ~~~~~~~~Ifa~G~ 417 (463)
T 3s5w_A 404 TDERCKVAIYAQGF 417 (463)
T ss_dssp BCTTBCSEEEESSC
T ss_pred cCCCCCCeEEEcCC
Confidence 1112346888884
No 208
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.69 E-value=2.3e-07 Score=85.95 Aligned_cols=106 Identities=15% Similarity=0.134 Sum_probs=81.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+. .
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l----~-------------------------------------- 224 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL----R-------------------------------------- 224 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC----T--------------------------------------
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc----c--------------------------------------
Confidence 3689999999999999999999999999999865431 0
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCC-cEEEEEeecC-Cce--EEEEeCE
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESN-KWKVKSRKKD-DVV--EEETFDA 157 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~-~~~v~~~~g~-~~~--~~~~~d~ 157 (354)
.+ . .++.+.+.+.+++.|++ ++.++++.+++..+++ ...+...+.. +.. .++.+|.
T Consensus 225 ~~----d--------------~~~~~~~~~~l~~~gv~--i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~ 284 (478)
T 3dk9_A 225 SF----D--------------SMISTNCTEELENAGVE--VLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDC 284 (478)
T ss_dssp TS----C--------------HHHHHHHHHHHHHTTCE--EETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESE
T ss_pred cc----C--------------HHHHHHHHHHHHHCCCE--EEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCE
Confidence 00 0 67778888888889999 9999999999876523 3556665421 211 5789999
Q ss_pred EEEeeCCCCCcccC
Q 018550 158 VVVCNGHFSVPRLA 171 (354)
Q Consensus 158 vIlAtG~~s~~~~p 171 (354)
||+|+| ..|+..
T Consensus 285 vi~a~G--~~p~~~ 296 (478)
T 3dk9_A 285 LLWAIG--RVPNTK 296 (478)
T ss_dssp EEECSC--EEESCT
T ss_pred EEEeec--cccCCC
Confidence 999999 566554
No 209
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.68 E-value=1.4e-07 Score=89.37 Aligned_cols=100 Identities=22% Similarity=0.289 Sum_probs=79.6
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhccccccccccC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (354)
++|+|||+|+.|+.+|..|++.|.+|+++++.+.+..
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------------- 188 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMT------------------------------------------- 188 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCT-------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccch-------------------------------------------
Confidence 6899999999999999999999999999998653210
Q ss_pred CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEe------------------CCCcEEEEEe
Q 018550 83 YPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLV------------------ESNKWKVKSR 144 (354)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~------------------~~~~~~v~~~ 144 (354)
. .. .++.+.+.+.+++.|++ +++++++.++..+ .++...+...
T Consensus 189 --~-~~--------------~~~~~~l~~~l~~~GV~--i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 249 (565)
T 3ntd_A 189 --P-VD--------------REMAGFAHQAIRDQGVD--LRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLS 249 (565)
T ss_dssp --T-SC--------------HHHHHHHHHHHHHTTCE--EEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEET
T ss_pred --h-cC--------------HHHHHHHHHHHHHCCCE--EEeCCeEEEEeccccccccccccccccccccCCCcEEEEEc
Confidence 0 00 66778888888889999 9999999999874 2255667666
Q ss_pred ecCCceEEEEeCEEEEeeCCCCCccc
Q 018550 145 KKDDVVEEETFDAVVVCNGHFSVPRL 170 (354)
Q Consensus 145 ~g~~~~~~~~~d~vIlAtG~~s~~~~ 170 (354)
++. ++.+|.||+|+| ..|..
T Consensus 250 ~g~----~i~~D~vi~a~G--~~p~~ 269 (565)
T 3ntd_A 250 NGE----LLETDLLIMAIG--VRPET 269 (565)
T ss_dssp TSC----EEEESEEEECSC--EEECC
T ss_pred CCC----EEEcCEEEECcC--Cccch
Confidence 554 899999999999 55543
No 210
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.67 E-value=1.1e-07 Score=88.37 Aligned_cols=101 Identities=22% Similarity=0.263 Sum_probs=78.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHH----cCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLR----EGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPREL 77 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~----~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (354)
.++|+|||+|+.|+.+|..|++ .|.+|+++++.+.+...
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~------------------------------------- 222 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGK------------------------------------- 222 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTT-------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccc-------------------------------------
Confidence 3689999999999999999987 47899999875422000
Q ss_pred ccccCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCE
Q 018550 78 MGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDA 157 (354)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~ 157 (354)
.++ ..+.+.+.+.+++.|++ ++++++|.++..++ +...+.+.+|. ++.+|.
T Consensus 223 --------------------~l~--~~~~~~~~~~l~~~GV~--v~~~~~V~~i~~~~-~~~~v~l~dG~----~i~aD~ 273 (493)
T 1m6i_A 223 --------------------ILP--EYLSNWTMEKVRREGVK--VMPNAIVQSVGVSS-GKLLIKLKDGR----KVETDH 273 (493)
T ss_dssp --------------------TSC--HHHHHHHHHHHHTTTCE--EECSCCEEEEEEET-TEEEEEETTSC----EEEESE
T ss_pred --------------------cCC--HHHHHHHHHHHHhcCCE--EEeCCEEEEEEecC-CeEEEEECCCC----EEECCE
Confidence 011 56677788888888999 99999999998765 55667777664 899999
Q ss_pred EEEeeCCCCCccc
Q 018550 158 VVVCNGHFSVPRL 170 (354)
Q Consensus 158 vIlAtG~~s~~~~ 170 (354)
||+|+| ..|+.
T Consensus 274 Vv~a~G--~~pn~ 284 (493)
T 1m6i_A 274 IVAAVG--LEPNV 284 (493)
T ss_dssp EEECCC--EEECC
T ss_pred EEECCC--CCccH
Confidence 999999 55554
No 211
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.66 E-value=2.1e-08 Score=95.85 Aligned_cols=66 Identities=12% Similarity=-0.046 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHh--CCcceEEeceEEEEEEEeCC---CcEEEEEee-cCCceEEEEeCEEEEeeCCCCCccc
Q 018550 103 EEVLRYLQNFAREF--GVDQVVRLHTEVLNARLVES---NKWKVKSRK-KDDVVEEETFDAVVVCNGHFSVPRL 170 (354)
Q Consensus 103 ~~~~~~l~~~~~~~--~~~~~v~~~~~v~~i~~~~~---~~~~v~~~~-g~~~~~~~~~d~vIlAtG~~s~~~~ 170 (354)
..+...+.+.+.+. +++ +..++.++++..+++ ....+...+ .++....+.++.||+|||.++....
T Consensus 166 ~~i~~~L~~~a~~~~~gV~--i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g~~y~ 237 (662)
T 3gyx_A 166 ESYKVIVAEAAKNALGQDR--IIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAVNVYR 237 (662)
T ss_dssp TSHHHHHHHHHHHHHCTTT--EECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSSSC
T ss_pred HHHHHHHHHHHHhcCCCcE--EEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCccccccc
Confidence 46777777777776 898 999999999988763 223343332 2233467899999999997664333
No 212
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.66 E-value=1.5e-07 Score=85.92 Aligned_cols=96 Identities=17% Similarity=0.225 Sum_probs=75.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||||+.|+.+|..+++.|.+|+++++.+.+...+.
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~d--------------------------------------- 187 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMD--------------------------------------- 187 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTTSC---------------------------------------
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeecccccccc---------------------------------------
Confidence 36899999999999999999999999999998764311000
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEe
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlA 161 (354)
.++.+.+.+..++.+++ ++++++|.+++. ..+++.+++ ++++|.|++|
T Consensus 188 ---------------------~~~~~~~~~~l~~~gV~--i~~~~~v~~~~~-----~~v~~~~g~----~~~~D~vl~a 235 (437)
T 4eqs_A 188 ---------------------ADMNQPILDELDKREIP--YRLNEEINAING-----NEITFKSGK----VEHYDMIIEG 235 (437)
T ss_dssp ---------------------GGGGHHHHHHHHHTTCC--EEESCCEEEEET-----TEEEETTSC----EEECSEEEEC
T ss_pred ---------------------chhHHHHHHHhhccceE--EEeccEEEEecC-----CeeeecCCe----EEeeeeEEEE
Confidence 44557778888888999 999999988752 236666664 8899999999
Q ss_pred eCCCCCccc
Q 018550 162 NGHFSVPRL 170 (354)
Q Consensus 162 tG~~s~~~~ 170 (354)
+| ..|+.
T Consensus 236 ~G--~~Pn~ 242 (437)
T 4eqs_A 236 VG--THPNS 242 (437)
T ss_dssp CC--EEESC
T ss_pred ec--eecCc
Confidence 99 56654
No 213
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.64 E-value=5.8e-07 Score=83.37 Aligned_cols=105 Identities=16% Similarity=0.157 Sum_probs=81.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||+|+.|+.+|..|++.|.+|+++++.. + +..
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~---l~~-------------------------------------- 222 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRSI-P---LRG-------------------------------------- 222 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-S---STT--------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCc-c---ccc--------------------------------------
Confidence 3679999999999999999999999999999742 1 000
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecC-CceEEEEeCEEEE
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKD-DVVEEETFDAVVV 160 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~-~~~~~~~~d~vIl 160 (354)
+ . .++.+.+.+.+++.|++ +++++++.++...+++...+...+.. ++..++.+|.||+
T Consensus 223 -~----d--------------~~~~~~l~~~l~~~gv~--~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~ 281 (488)
T 3dgz_A 223 -F----D--------------QQMSSLVTEHMESHGTQ--FLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLW 281 (488)
T ss_dssp -S----C--------------HHHHHHHHHHHHHTTCE--EEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEE
T ss_pred -C----C--------------HHHHHHHHHHHHHCCCE--EEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEE
Confidence 0 0 67788888888889999 99999999998755356777776632 2334689999999
Q ss_pred eeCCCCCcccC
Q 018550 161 CNGHFSVPRLA 171 (354)
Q Consensus 161 AtG~~s~~~~p 171 (354)
|+| ..|+..
T Consensus 282 a~G--~~p~~~ 290 (488)
T 3dgz_A 282 AIG--RVPETR 290 (488)
T ss_dssp CSC--EEESCG
T ss_pred ccc--CCcccC
Confidence 999 555543
No 214
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.62 E-value=2.4e-07 Score=85.34 Aligned_cols=101 Identities=13% Similarity=0.194 Sum_probs=80.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++++|||+|+.|+.+|..|++.|.+|+++++.+.+. .
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l----~-------------------------------------- 207 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEIL----S-------------------------------------- 207 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS----T--------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc----c--------------------------------------
Confidence 4689999999999999999999999999999865331 0
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEE-EeecCCceEEEEeCEEEE
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVK-SRKKDDVVEEETFDAVVV 160 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~-~~~g~~~~~~~~~d~vIl 160 (354)
.+ . .++.+.+.+.+++.|++ ++.+++|.++..++++...+. +.+| ++.+|.||+
T Consensus 208 ~~----~--------------~~~~~~l~~~l~~~Gv~--i~~~~~v~~i~~~~~~~~~v~~~~~g-----~i~aD~Vv~ 262 (463)
T 4dna_A 208 RF----D--------------QDMRRGLHAAMEEKGIR--ILCEDIIQSVSADADGRRVATTMKHG-----EIVADQVML 262 (463)
T ss_dssp TS----C--------------HHHHHHHHHHHHHTTCE--EECSCCEEEEEECTTSCEEEEESSSC-----EEEESEEEE
T ss_pred cc----C--------------HHHHHHHHHHHHHCCCE--EECCCEEEEEEEcCCCEEEEEEcCCC-----eEEeCEEEE
Confidence 00 0 67788888888899999 999999999998653445666 5554 389999999
Q ss_pred eeCCCCCcccC
Q 018550 161 CNGHFSVPRLA 171 (354)
Q Consensus 161 AtG~~s~~~~p 171 (354)
|+| .+|+..
T Consensus 263 a~G--~~p~~~ 271 (463)
T 4dna_A 263 ALG--RMPNTN 271 (463)
T ss_dssp CSC--EEESCT
T ss_pred eeC--cccCCC
Confidence 999 555544
No 215
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.59 E-value=1.6e-07 Score=83.70 Aligned_cols=93 Identities=26% Similarity=0.366 Sum_probs=74.4
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhccccccccccC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (354)
++|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. .
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~---~--------------------------------------- 181 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG---L--------------------------------------- 181 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT---C---------------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc---C---------------------------------------
Confidence 6899999999999999999999999999998754311 0
Q ss_pred CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEee
Q 018550 83 YPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCN 162 (354)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlAt 162 (354)
. .++.+++.+.+++.|++ +.++++|.+++ . + .+.+.+| . +++|.||+|+
T Consensus 182 -----~--------------~~~~~~l~~~l~~~gV~--i~~~~~v~~i~--~-~--~v~~~~g----~-i~~D~vi~a~ 230 (367)
T 1xhc_A 182 -----D--------------EELSNMIKDMLEETGVK--FFLNSELLEAN--E-E--GVLTNSG----F-IEGKVKICAI 230 (367)
T ss_dssp -----C--------------HHHHHHHHHHHHHTTEE--EECSCCEEEEC--S-S--EEEETTE----E-EECSCEEEEC
T ss_pred -----C--------------HHHHHHHHHHHHHCCCE--EEcCCEEEEEE--e-e--EEEECCC----E-EEcCEEEECc
Confidence 0 67778888888888998 99999999986 2 2 3555443 3 8999999999
Q ss_pred CCCCCccc
Q 018550 163 GHFSVPRL 170 (354)
Q Consensus 163 G~~s~~~~ 170 (354)
| ..|+.
T Consensus 231 G--~~p~~ 236 (367)
T 1xhc_A 231 G--IVPNV 236 (367)
T ss_dssp C--EEECC
T ss_pred C--CCcCH
Confidence 9 55554
No 216
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.55 E-value=4.6e-07 Score=79.09 Aligned_cols=104 Identities=16% Similarity=0.159 Sum_probs=76.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+. .
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~----~-------------------------------------- 182 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR----A-------------------------------------- 182 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC----C--------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccc----c--------------------------------------
Confidence 3689999999999999999999999999999864320 0
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecC--CceEEEEeCEEE
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKD--DVVEEETFDAVV 159 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~--~~~~~~~~d~vI 159 (354)
. ..+.+.+.+.+.+.+++ +++++++.++..+++....+.+.+.. +...++.+|.||
T Consensus 183 ------~--------------~~~~~~l~~~l~~~gv~--i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv 240 (320)
T 1trb_A 183 ------E--------------KILIKRLMDKVENGNII--LHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLF 240 (320)
T ss_dssp ------C--------------HHHHHHHHHHHHTSSEE--EECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEE
T ss_pred ------C--------------HHHHHHHHHhcccCCeE--EEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEE
Confidence 0 45556666667777888 99999999998765222335555421 223578999999
Q ss_pred EeeCCCCCcccC
Q 018550 160 VCNGHFSVPRLA 171 (354)
Q Consensus 160 lAtG~~s~~~~p 171 (354)
+|+| ..|...
T Consensus 241 ~a~G--~~p~~~ 250 (320)
T 1trb_A 241 VAIG--HSPNTA 250 (320)
T ss_dssp ECSC--EEESCG
T ss_pred EEeC--CCCChH
Confidence 9999 555543
No 217
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.55 E-value=3.6e-08 Score=91.88 Aligned_cols=56 Identities=16% Similarity=0.150 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEE-EEEeecCCceEEEEeCEEEEeeCCCC
Q 018550 104 EVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWK-VKSRKKDDVVEEETFDAVVVCNGHFS 166 (354)
Q Consensus 104 ~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~-v~~~~g~~~~~~~~~d~vIlAtG~~s 166 (354)
.+.+.+.+.+++.|.+ |+++++|++|..++ ++++ |++.+|+ ++.+|.||.+++.+.
T Consensus 222 ~l~~aL~~~~~~~Gg~--I~~~~~V~~I~~~~-~~~~gV~~~~g~----~~~ad~VV~~a~~~~ 278 (501)
T 4dgk_A 222 ALVQGMIKLFQDLGGE--VVLNARVSHMETTG-NKIEAVHLEDGR----RFLTQAVASNADVVH 278 (501)
T ss_dssp HHHHHHHHHHHHTTCE--EECSCCEEEEEEET-TEEEEEEETTSC----EEECSCEEECCC---
T ss_pred chHHHHHHHHHHhCCc--eeeecceeEEEeeC-CeEEEEEecCCc----EEEcCEEEECCCHHH
Confidence 4556667777788888 99999999999987 5554 7788875 899999999988543
No 218
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.54 E-value=1.5e-08 Score=89.94 Aligned_cols=34 Identities=29% Similarity=0.334 Sum_probs=31.5
Q ss_pred CeEEEEcCChHHHHHHHHHHHcC------CcEEEEeeCCC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREG------HTVVVYEKGEQ 36 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g------~~v~lie~~~~ 36 (354)
+||+|||||++|+++|+.|+++| .+|+|+|++..
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~ 40 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFT 40 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCG
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCC
Confidence 58999999999999999999998 89999999753
No 219
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.54 E-value=4.4e-07 Score=83.67 Aligned_cols=104 Identities=16% Similarity=0.288 Sum_probs=74.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+...+.
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~--------------------------------------- 212 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITLE--------------------------------------- 212 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSC---------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCCC---------------------------------------
Confidence 36899999999999999999999999999998653310000
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEe
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlA 161 (354)
. .++.+.+.+... ++ +.++++|.++..++++...+...+.++...++.+|.||+|
T Consensus 213 ------d--------------~~~~~~l~~~l~---v~--i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a 267 (466)
T 3l8k_A 213 ------D--------------QDIVNTLLSILK---LN--IKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSIFTNSVVLA 267 (466)
T ss_dssp ------C--------------HHHHHHHHHHHC---CC--EECSCCEEEEEEEETTEEEEEECCTTSCCEEEEESCEEEC
T ss_pred ------C--------------HHHHHHHHhcCE---EE--EEECCEEEEEEEcCCCcEEEEEEecCCceEEEEcCEEEEC
Confidence 0 455555554443 77 8999999999875424456666521222357899999999
Q ss_pred eCCCCCcccC
Q 018550 162 NGHFSVPRLA 171 (354)
Q Consensus 162 tG~~s~~~~p 171 (354)
+| .+|+..
T Consensus 268 ~G--~~p~~~ 275 (466)
T 3l8k_A 268 AG--RRPVIP 275 (466)
T ss_dssp CC--EEECCC
T ss_pred cC--CCcccc
Confidence 99 666554
No 220
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.54 E-value=1.2e-06 Score=81.83 Aligned_cols=105 Identities=14% Similarity=0.223 Sum_probs=77.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++++|||+|+.|+.+|..|++.|.+|+++++. .+ ..
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~-~~----l~-------------------------------------- 246 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRS-IL----LR-------------------------------------- 246 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CS----ST--------------------------------------
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc-cc----cc--------------------------------------
Confidence 357999999999999999999999999999974 21 00
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCC---CcEEEEEeecCC-ceEEEEeCE
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVES---NKWKVKSRKKDD-VVEEETFDA 157 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~---~~~~v~~~~g~~-~~~~~~~d~ 157 (354)
.+ . .++.+.+.+.+++.|++ ++.++++.++...++ +...+.....++ +..++.+|.
T Consensus 247 ~~----d--------------~~~~~~~~~~l~~~GV~--v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~ 306 (519)
T 3qfa_A 247 GF----D--------------QDMANKIGEHMEEHGIK--FIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNT 306 (519)
T ss_dssp TS----C--------------HHHHHHHHHHHHHTTCE--EEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESE
T ss_pred cC----C--------------HHHHHHHHHHHHHCCCE--EEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCE
Confidence 00 0 67788888888889999 999988888876432 345555443322 224678999
Q ss_pred EEEeeCCCCCcccC
Q 018550 158 VVVCNGHFSVPRLA 171 (354)
Q Consensus 158 vIlAtG~~s~~~~p 171 (354)
||+|+| ..|+..
T Consensus 307 vi~a~G--~~p~~~ 318 (519)
T 3qfa_A 307 VMLAIG--RDACTR 318 (519)
T ss_dssp EEECSC--EEESCS
T ss_pred EEEecC--CcccCC
Confidence 999999 666554
No 221
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.53 E-value=2e-07 Score=86.64 Aligned_cols=96 Identities=18% Similarity=0.264 Sum_probs=73.2
Q ss_pred eEEEEcCChHHHHHHHHHHHc--------------CCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccc
Q 018550 4 HVAVIGAGAAGLVVGHELLRE--------------GHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSL 69 (354)
Q Consensus 4 ~vvIIG~G~aG~~~a~~l~~~--------------g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (354)
+++|||||+.|+.+|..|++. ..+|+|+|+.+.+-..
T Consensus 219 ~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~----------------------------- 269 (502)
T 4g6h_A 219 SIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNM----------------------------- 269 (502)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTT-----------------------------
T ss_pred ceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccC-----------------------------
Confidence 699999999999999998754 3689999987643100
Q ss_pred hhccccccccccCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEe--ecC
Q 018550 70 RVNLPRELMGFQAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSR--KKD 147 (354)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~--~g~ 147 (354)
|+ .++.+++.+.+++.|++ ++++++|++++. +...+... ++.
T Consensus 270 -----------------------------~~--~~~~~~~~~~L~~~GV~--v~~~~~v~~v~~---~~~~~~~~~~dg~ 313 (502)
T 4g6h_A 270 -----------------------------FE--KKLSSYAQSHLENTSIK--VHLRTAVAKVEE---KQLLAKTKHEDGK 313 (502)
T ss_dssp -----------------------------SC--HHHHHHHHHHHHHTTCE--EETTEEEEEECS---SEEEEEEECTTSC
T ss_pred -----------------------------CC--HHHHHHHHHHHHhccee--eecCceEEEEeC---CceEEEEEecCcc
Confidence 00 78889999999999999 999999999864 33444443 332
Q ss_pred CceEEEEeCEEEEeeCC
Q 018550 148 DVVEEETFDAVVVCNGH 164 (354)
Q Consensus 148 ~~~~~~~~d~vIlAtG~ 164 (354)
..++++++|.||.|+|.
T Consensus 314 ~~~~~i~ad~viwa~Gv 330 (502)
T 4g6h_A 314 ITEETIPYGTLIWATGN 330 (502)
T ss_dssp EEEEEEECSEEEECCCE
T ss_pred cceeeeccCEEEEccCC
Confidence 23467999999999994
No 222
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.52 E-value=8.2e-08 Score=86.17 Aligned_cols=88 Identities=7% Similarity=0.240 Sum_probs=67.9
Q ss_pred CeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC--------------ccccccC--------CCCC-CeEEecceeEEe
Q 018550 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA--------------DETHEKQ--------PGYD-NMWLHSMVERAN 254 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~--------------~~~~~~l--------~~~~-~~~~~~~v~~v~ 254 (354)
-+|+|||+|+.|+.+|..|.+.+.+|+++.+++. ....+++ .+.+ +++.++.|+.+.
T Consensus 10 ~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~~V~~id 89 (385)
T 3klj_A 10 TKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEFATSID 89 (385)
T ss_dssp CSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEECSCCEEEEE
T ss_pred CCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEeCCEEEEEE
Confidence 4599999999999999999878889999998774 0001111 1223 677888999998
Q ss_pred cCCc-EEEccCcEEecCEEEEcccCCCccCcc
Q 018550 255 EDGT-VVFRNGRVVSADVIMHCTGLTGTSTTT 285 (354)
Q Consensus 255 ~~~~-v~~~~g~~~~~D~vi~a~G~~~~~p~~ 285 (354)
.+.+ |++++|+++.+|.+|+|||.+|..|..
T Consensus 90 ~~~~~v~~~~g~~~~yd~lvlAtG~~p~~p~i 121 (385)
T 3klj_A 90 PNNKLVTLKSGEKIKYEKLIIASGSIANKIKV 121 (385)
T ss_dssp TTTTEEEETTSCEEECSEEEECCCEEECCCCC
T ss_pred CCCCEEEECCCCEEECCEEEEecCCCcCCCCC
Confidence 6544 888999999999999999998655543
No 223
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.52 E-value=1.2e-07 Score=85.73 Aligned_cols=90 Identities=12% Similarity=0.063 Sum_probs=66.7
Q ss_pred CCeEEEEccCCCHHHHHHHHhccC--CEEEEEEecCC-----------------ccc---cccCCCCCCeEEecceeEEe
Q 018550 197 DQVVILIGHYASGLDIKRDLAGFA--KEVHIASRSVA-----------------DET---HEKQPGYDNMWLHSMVERAN 254 (354)
Q Consensus 197 ~~~v~ViG~G~~g~e~a~~l~~~g--~~v~~~~r~~~-----------------~~~---~~~l~~~~~~~~~~~v~~v~ 254 (354)
+|+|+|||+|+.|+.+|..|++.+ .+|++|++++. +.. ++.+.+.+.-+....++.+.
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~gv~~i~~~v~~id 81 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHGIQVVHDSALGID 81 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTTCEEECSCEEEEE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCCCEEEEeEEEEEE
Confidence 689999999999999999998775 58999988763 111 11122334334566788888
Q ss_pred cCCc-EEEccCcEEecCEEEEcccCCCccCccc
Q 018550 255 EDGT-VVFRNGRVVSADVIMHCTGLTGTSTTTL 286 (354)
Q Consensus 255 ~~~~-v~~~~g~~~~~D~vi~a~G~~~~~p~~~ 286 (354)
.+.+ +++.+|.++.+|.+++|||.+++.|..+
T Consensus 82 ~~~~~v~~~~g~~i~yd~LviAtG~~~~~~~i~ 114 (401)
T 3vrd_B 82 PDKKLVKTAGGAEFAYDRCVVAPGIDLLYDKIE 114 (401)
T ss_dssp TTTTEEEETTSCEEECSEEEECCCEEECGGGSB
T ss_pred ccCcEEEecccceeecceeeeccCCccccCCcc
Confidence 6554 8888999999999999999985544443
No 224
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.52 E-value=4e-07 Score=86.53 Aligned_cols=98 Identities=21% Similarity=0.266 Sum_probs=77.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+...
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 225 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP----------------------------------------- 225 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc-----------------------------------------
Confidence 468999999999999999999999999999986532100
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEe
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlA 161 (354)
.. .++.+.+.+.+++.|++ ++++++|.++..++ + .+.+.++. ++.+|.||+|
T Consensus 226 -----~~--------------~~~~~~l~~~l~~~GV~--i~~~~~v~~i~~~~-~--~v~~~~g~----~i~~D~Vi~a 277 (588)
T 3ics_A 226 -----ID--------------YEMAAYVHEHMKNHDVE--LVFEDGVDALEENG-A--VVRLKSGS----VIQTDMLILA 277 (588)
T ss_dssp -----SC--------------HHHHHHHHHHHHHTTCE--EECSCCEEEEEGGG-T--EEEETTSC----EEECSEEEEC
T ss_pred -----CC--------------HHHHHHHHHHHHHcCCE--EEECCeEEEEecCC-C--EEEECCCC----EEEcCEEEEc
Confidence 00 67778888888889999 99999999997643 3 45666654 8999999999
Q ss_pred eCCCCCccc
Q 018550 162 NGHFSVPRL 170 (354)
Q Consensus 162 tG~~s~~~~ 170 (354)
+| ..|+.
T Consensus 278 ~G--~~p~~ 284 (588)
T 3ics_A 278 IG--VQPES 284 (588)
T ss_dssp SC--EEECC
T ss_pred cC--CCCCh
Confidence 99 55543
No 225
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.51 E-value=2.1e-07 Score=90.54 Aligned_cols=39 Identities=38% Similarity=0.626 Sum_probs=36.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccce
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGS 40 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~ 40 (354)
.++|+|||||++|+++|..|++.|++|+|+|+.+.+||.
T Consensus 336 ~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ggr 374 (776)
T 4gut_A 336 NKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGR 374 (776)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceece
Confidence 368999999999999999999999999999998888873
No 226
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.51 E-value=1.7e-07 Score=85.47 Aligned_cols=83 Identities=17% Similarity=0.307 Sum_probs=63.0
Q ss_pred CeEEEEccCCCHHHHHHHHhccC--CEEEEEEecCC-----------------ccc---cccC-CCCCCeEEecceeEEe
Q 018550 198 QVVILIGHYASGLDIKRDLAGFA--KEVHIASRSVA-----------------DET---HEKQ-PGYDNMWLHSMVERAN 254 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~~g--~~v~~~~r~~~-----------------~~~---~~~l-~~~~~~~~~~~v~~v~ 254 (354)
|+|+|||+|+.|+.+|..|++.+ .+|+++.+++. ++. ++.+ .+.+.-+....++.+.
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~~i~~~v~~Id 82 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEKAESID 82 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECSCEEEEE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCCcEEEEeEEEEEE
Confidence 68999999999999999998875 68999998873 111 1122 2233223456788888
Q ss_pred cCCc-EEEccCcEEecCEEEEcccCCC
Q 018550 255 EDGT-VVFRNGRVVSADVIMHCTGLTG 280 (354)
Q Consensus 255 ~~~~-v~~~~g~~~~~D~vi~a~G~~~ 280 (354)
.+.+ |++++|+++++|.+|+|||.++
T Consensus 83 ~~~~~V~~~~g~~i~YD~LViAtG~~~ 109 (430)
T 3hyw_A 83 PDANTVTTQSGKKIEYDYLVIATGPKL 109 (430)
T ss_dssp TTTTEEEETTCCEEECSEEEECCCCEE
T ss_pred CCCCEEEECCCCEEECCEEEEeCCCCc
Confidence 6554 8899999999999999999874
No 227
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.50 E-value=2.3e-07 Score=84.81 Aligned_cols=86 Identities=16% Similarity=0.256 Sum_probs=66.1
Q ss_pred CeEEEEccCCCHHHHHHHHhc---cCCEEEEEEecCC-----------------ccc----cccCCCCC-CeEEecceeE
Q 018550 198 QVVILIGHYASGLDIKRDLAG---FAKEVHIASRSVA-----------------DET----HEKQPGYD-NMWLHSMVER 252 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~---~g~~v~~~~r~~~-----------------~~~----~~~l~~~~-~~~~~~~v~~ 252 (354)
++|+|||||+.|+.+|..|++ .+.+|+++.+.+. ++. .+.+.+.+ ++ ....++.
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~-~~~~v~~ 83 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHF-IAQSAEQ 83 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEE-ECSCEEE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEE-EEeEEEE
Confidence 689999999999999999998 7899999998874 011 11122344 44 4678888
Q ss_pred EecCCc-EEEccCcEEecCEEEEcccCCCccCc
Q 018550 253 ANEDGT-VVFRNGRVVSADVIMHCTGLTGTSTT 284 (354)
Q Consensus 253 v~~~~~-v~~~~g~~~~~D~vi~a~G~~~~~p~ 284 (354)
+..+.. |++++++++.+|.+|+|||..++.|.
T Consensus 84 id~~~~~V~~~~g~~i~~d~lviAtG~~~~~~~ 116 (437)
T 3sx6_A 84 IDAEAQNITLADGNTVHYDYLMIATGPKLAFEN 116 (437)
T ss_dssp EETTTTEEEETTSCEEECSEEEECCCCEECGGG
T ss_pred EEcCCCEEEECCCCEEECCEEEECCCCCcCccc
Confidence 886543 88888889999999999999955443
No 228
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.50 E-value=8.7e-07 Score=77.87 Aligned_cols=102 Identities=18% Similarity=0.163 Sum_probs=75.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||+|..|+.+|..|++.|.+|+++++.+.+ ..
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~----~~-------------------------------------- 189 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQF----RA-------------------------------------- 189 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSC----CS--------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCcc----Cc--------------------------------------
Confidence 368999999999999999999999999999986532 00
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeec-CCceEEEEeCEEEE
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKK-DDVVEEETFDAVVV 160 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g-~~~~~~~~~d~vIl 160 (354)
.....+.+.+.+++.+++ +++++++.++..++ +...+.+... ++...++.+|.||+
T Consensus 190 --------------------~~~~~~~l~~~l~~~gv~--v~~~~~v~~i~~~~-~~~~v~~~~~~~g~~~~i~~D~vi~ 246 (335)
T 2zbw_A 190 --------------------HEASVKELMKAHEEGRLE--VLTPYELRRVEGDE-RVRWAVVFHNQTQEELALEVDAVLI 246 (335)
T ss_dssp --------------------CHHHHHHHHHHHHTTSSE--EETTEEEEEEEESS-SEEEEEEEETTTCCEEEEECSEEEE
T ss_pred --------------------cHHHHHHHHhccccCCeE--EecCCcceeEccCC-CeeEEEEEECCCCceEEEecCEEEE
Confidence 034456666666777888 99999999998743 4335665521 22235789999999
Q ss_pred eeCCCCCccc
Q 018550 161 CNGHFSVPRL 170 (354)
Q Consensus 161 AtG~~s~~~~ 170 (354)
|+| ..|..
T Consensus 247 a~G--~~p~~ 254 (335)
T 2zbw_A 247 LAG--YITKL 254 (335)
T ss_dssp CCC--EEEEC
T ss_pred eec--CCCCc
Confidence 999 56654
No 229
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.50 E-value=5.9e-08 Score=90.69 Aligned_cols=41 Identities=32% Similarity=0.400 Sum_probs=37.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHHc-CCcEEEEeeCCCccceee
Q 018550 2 FRHVAVIGAGAAGLVVGHELLRE-GHTVVVYEKGEQVGGSWI 42 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~-g~~v~lie~~~~~gg~~~ 42 (354)
.+||+|||||++|++||+.|+++ |++|+|+|+++.+||.+.
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~ 51 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLAS 51 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGC
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCee
Confidence 46899999999999999999985 999999999999999764
No 230
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.47 E-value=2.4e-06 Score=81.37 Aligned_cols=103 Identities=21% Similarity=0.275 Sum_probs=74.4
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhccccccccccC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (354)
++|+|||||+.|+.+|..|++.|.+|+++++. .+ .. .
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~----l~--------------------------------------~ 323 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS-IL----LR--------------------------------------G 323 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CS----ST--------------------------------------T
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC-cC----cC--------------------------------------c
Confidence 57999999999999999999999999999975 21 00 0
Q ss_pred CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEe-----CC---CcEEEEEeecCCceEEEE
Q 018550 83 YPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLV-----ES---NKWKVKSRKKDDVVEEET 154 (354)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~-----~~---~~~~v~~~~g~~~~~~~~ 154 (354)
+ . .++.+.+.+.+++.|++ +++++.+.++... ++ +...+.....++.+..+.
T Consensus 324 ~----d--------------~~~~~~~~~~l~~~gv~--i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~ 383 (598)
T 2x8g_A 324 F----D--------------QQMAEKVGDYMENHGVK--FAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEE 383 (598)
T ss_dssp S----C--------------HHHHHHHHHHHHHTTCE--EEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEE
T ss_pred C----C--------------HHHHHHHHHHHHhCCCE--EEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEecc
Confidence 0 0 56677788888888999 9999888888653 21 334454332222234456
Q ss_pred eCEEEEeeCCCCCccc
Q 018550 155 FDAVVVCNGHFSVPRL 170 (354)
Q Consensus 155 ~d~vIlAtG~~s~~~~ 170 (354)
+|.||+|+| ..|+.
T Consensus 384 ~D~vi~a~G--~~p~~ 397 (598)
T 2x8g_A 384 FETVIFAVG--REPQL 397 (598)
T ss_dssp ESEEEECSC--EEECG
T ss_pred CCEEEEEeC--Ccccc
Confidence 999999999 56654
No 231
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.47 E-value=5.2e-07 Score=82.81 Aligned_cols=98 Identities=23% Similarity=0.343 Sum_probs=72.8
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhccccccccccC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (354)
++|+|||+|+.|+.+|..|++.|.+|+++++.+.+....
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~----------------------------------------- 187 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRRS----------------------------------------- 187 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT-----------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhh-----------------------------------------
Confidence 589999999999999999999999999999875331000
Q ss_pred CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEee
Q 018550 83 YPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCN 162 (354)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlAt 162 (354)
.. .++.+.+.+.+.+. ++ +++++.+.++..++ ....+ ..++ .++.+|.||+|+
T Consensus 188 ----~~--------------~~~~~~l~~~l~~~-v~--i~~~~~v~~i~~~~-~v~~v-~~~g----~~i~~D~Vv~a~ 240 (449)
T 3kd9_A 188 ----FD--------------KEVTDILEEKLKKH-VN--LRLQEITMKIEGEE-RVEKV-VTDA----GEYKAELVILAT 240 (449)
T ss_dssp ----SC--------------HHHHHHHHHHHTTT-SE--EEESCCEEEEECSS-SCCEE-EETT----EEEECSEEEECS
T ss_pred ----cC--------------HHHHHHHHHHHHhC-cE--EEeCCeEEEEeccC-cEEEE-EeCC----CEEECCEEEEee
Confidence 00 66777777777766 77 89999999997543 22223 3333 379999999999
Q ss_pred CCCCCccc
Q 018550 163 GHFSVPRL 170 (354)
Q Consensus 163 G~~s~~~~ 170 (354)
| ..|+.
T Consensus 241 G--~~p~~ 246 (449)
T 3kd9_A 241 G--IKPNI 246 (449)
T ss_dssp C--EEECC
T ss_pred C--CccCH
Confidence 9 55543
No 232
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.44 E-value=8.1e-07 Score=79.19 Aligned_cols=107 Identities=13% Similarity=0.207 Sum_probs=74.1
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhccccccccccC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (354)
++|+|||+|+.|+.+|..|++.|.+|+++++.+.+.... . +
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~-~--------------------------------------d 207 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPD-A--------------------------------------D 207 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECC-------------------------------------------------
T ss_pred CEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCC-C--------------------------------------C
Confidence 589999999999999999999999999999865331000 0 0
Q ss_pred CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-CcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEe
Q 018550 83 YPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFG-VDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (354)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlA 161 (354)
... .++ ..+.+.+.+..++.+ ++ ++.+++|.++..++ +.+.+.+.+|. ....+|.||+|
T Consensus 208 ~~~------------~~~--~~~~~~l~~~l~~~g~v~--~~~~~~v~~i~~~~-~~~~v~~~~g~---~~~~~d~vi~a 267 (369)
T 3d1c_A 208 PSV------------RLS--PYTRQRLGNVIKQGARIE--MNVHYTVKDIDFNN-GQYHISFDSGQ---SVHTPHEPILA 267 (369)
T ss_dssp CTT------------SCC--HHHHHHHHHHHHTTCCEE--EECSCCEEEEEEET-TEEEEEESSSC---CEEESSCCEEC
T ss_pred CCc------------cCC--HHHHHHHHHHHhhCCcEE--EecCcEEEEEEecC-CceEEEecCCe---EeccCCceEEe
Confidence 000 000 455666777777675 88 89999999998665 66777777764 12346999999
Q ss_pred eCCCCCccc
Q 018550 162 NGHFSVPRL 170 (354)
Q Consensus 162 tG~~s~~~~ 170 (354)
+| ..|..
T Consensus 268 ~G--~~~~~ 274 (369)
T 3d1c_A 268 TG--FDATK 274 (369)
T ss_dssp CC--BCGGG
T ss_pred ec--cCCcc
Confidence 99 56655
No 233
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.41 E-value=2.4e-06 Score=81.33 Aligned_cols=40 Identities=28% Similarity=0.454 Sum_probs=35.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCcccee
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSW 41 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~ 41 (354)
.+||+|||||++|+.+|..|++.|++|+|||+.+..++.+
T Consensus 46 ~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 46 KYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLK 85 (623)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSS
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcc
Confidence 3689999999999999999999999999999987776533
No 234
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.41 E-value=1.6e-06 Score=77.05 Aligned_cols=102 Identities=20% Similarity=0.237 Sum_probs=73.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||+|+.|+.+|..|++.+.+|+++++.+.+. .
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~----~-------------------------------------- 200 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQ----G-------------------------------------- 200 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCS----S--------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCC----C--------------------------------------
Confidence 3689999999999999999999999999999865320 0
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcE-EEEEeecCCceEEEEeCEEEE
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKW-KVKSRKKDDVVEEETFDAVVV 160 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~-~v~~~~g~~~~~~~~~d~vIl 160 (354)
...+.+.+.+..++.+++ +++++++.++..++ +.. .+.+...++....+.+|.||+
T Consensus 201 --------------------~~~~~~~l~~~~~~~gv~--i~~~~~v~~i~~~~-~~v~~v~~~~~~g~~~~i~~D~vi~ 257 (360)
T 3ab1_A 201 --------------------HGKTAHEVERARANGTID--VYLETEVASIEESN-GVLTRVHLRSSDGSKWTVEADRLLI 257 (360)
T ss_dssp --------------------CSHHHHSSHHHHHHTSEE--EESSEEEEEEEEET-TEEEEEEEEETTCCEEEEECSEEEE
T ss_pred --------------------CHHHHHHHHHHhhcCceE--EEcCcCHHHhccCC-CceEEEEEEecCCCeEEEeCCEEEE
Confidence 022334455556667888 99999999998765 332 455442222235889999999
Q ss_pred eeCCCCCccc
Q 018550 161 CNGHFSVPRL 170 (354)
Q Consensus 161 AtG~~s~~~~ 170 (354)
|+| ..|..
T Consensus 258 a~G--~~p~~ 265 (360)
T 3ab1_A 258 LIG--FKSNL 265 (360)
T ss_dssp CCC--BCCSC
T ss_pred CCC--CCCCH
Confidence 999 55543
No 235
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.41 E-value=1.6e-07 Score=86.96 Aligned_cols=43 Identities=37% Similarity=0.487 Sum_probs=39.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCC--cEEEEeeCCCccceeec
Q 018550 1 MFRHVAVIGAGAAGLVVGHELLREGH--TVVVYEKGEQVGGSWIY 43 (354)
Q Consensus 1 ~~~~vvIIG~G~aG~~~a~~l~~~g~--~v~lie~~~~~gg~~~~ 43 (354)
|+++|+|||||++|+++|+.|+++|. +|+|+|+++.+||.+..
T Consensus 1 m~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t 45 (477)
T 3nks_A 1 MGRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRS 45 (477)
T ss_dssp -CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCE
T ss_pred CCceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEE
Confidence 67899999999999999999999999 99999999999887643
No 236
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.40 E-value=3.3e-07 Score=79.01 Aligned_cols=87 Identities=22% Similarity=0.275 Sum_probs=64.1
Q ss_pred CeEEEEccCCCHHHHHHHHhccCCEEEEEEecCCc-----------------------cccccCCCCC-CeEEecceeEE
Q 018550 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSVAD-----------------------ETHEKQPGYD-NMWLHSMVERA 253 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~~-----------------------~~~~~l~~~~-~~~~~~~v~~v 253 (354)
.+|+|||+|+.|+.+|..|++.|.+|+++.+.+.. ...+.+.+.. ..+....++.+
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i 82 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWVEGRVTDA 82 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEEESCEEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEEEeEEEEE
Confidence 46999999999999999999999999999975430 0111113332 23346688888
Q ss_pred ecCC---cEEEccCcEEecCEEEEcccCCCccCc
Q 018550 254 NEDG---TVVFRNGRVVSADVIMHCTGLTGTSTT 284 (354)
Q Consensus 254 ~~~~---~v~~~~g~~~~~D~vi~a~G~~~~~p~ 284 (354)
..++ .|.+.+++++.+|.+|+|||..+..|.
T Consensus 83 ~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~~~~ 116 (297)
T 3fbs_A 83 KGSFGEFIVEIDGGRRETAGRLILAMGVTDELPE 116 (297)
T ss_dssp EEETTEEEEEETTSCEEEEEEEEECCCCEEECCC
T ss_pred EEcCCeEEEEECCCCEEEcCEEEECCCCCCCCCC
Confidence 7543 277788889999999999999955443
No 237
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.39 E-value=1.3e-06 Score=76.74 Aligned_cols=99 Identities=15% Similarity=0.184 Sum_probs=71.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+..
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~------------------------------------------ 210 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA------------------------------------------ 210 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS------------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC------------------------------------------
Confidence 36899999999999999999999999999998653200
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHH-hCCcceEEeceEEEEEEEeCCCcEEEEEeec-CCceEEEEeCEEE
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFARE-FGVDQVVRLHTEVLNARLVESNKWKVKSRKK-DDVVEEETFDAVV 159 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g-~~~~~~~~~d~vI 159 (354)
.+.+.+.+.+ .+++ +++++++.++..+++....+.+.+. ++...++.+|.||
T Consensus 211 ------------------------~~~~~~~l~~~~gv~--i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi 264 (338)
T 3itj_A 211 ------------------------STIMQKRAEKNEKIE--ILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLF 264 (338)
T ss_dssp ------------------------CHHHHHHHHHCTTEE--EECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEE
T ss_pred ------------------------CHHHHHHHHhcCCeE--EeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEE
Confidence 0122333333 4888 8999999999986623334666652 2223589999999
Q ss_pred EeeCCCCCccc
Q 018550 160 VCNGHFSVPRL 170 (354)
Q Consensus 160 lAtG~~s~~~~ 170 (354)
+|+| ..|..
T Consensus 265 ~a~G--~~p~~ 273 (338)
T 3itj_A 265 YAIG--HTPAT 273 (338)
T ss_dssp ECSC--EEECC
T ss_pred EEeC--CCCCh
Confidence 9999 55544
No 238
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.38 E-value=1.1e-06 Score=76.90 Aligned_cols=100 Identities=24% Similarity=0.216 Sum_probs=69.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+. .
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~----~-------------------------------------- 189 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLR----A-------------------------------------- 189 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC----S--------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCC----c--------------------------------------
Confidence 3689999999999999999999999999999864320 0
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEee-cCCceEEEEeCEEEE
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRK-KDDVVEEETFDAVVV 160 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~-g~~~~~~~~~d~vIl 160 (354)
. ..+. ++..++.+++ +++++++.++..++ ....+.+.+ .++...++.+|.||+
T Consensus 190 -------------------~-~~~~---~~l~~~~gv~--i~~~~~v~~i~~~~-~v~~v~~~~~~~g~~~~i~~D~vi~ 243 (325)
T 2q7v_A 190 -------------------N-KVAQ---ARAFANPKMK--FIWDTAVEEIQGAD-SVSGVKLRNLKTGEVSELATDGVFI 243 (325)
T ss_dssp -------------------C-HHHH---HHHHTCTTEE--EECSEEEEEEEESS-SEEEEEEEETTTCCEEEEECSEEEE
T ss_pred -------------------c-hHHH---HHHHhcCCce--EecCCceEEEccCC-cEEEEEEEECCCCcEEEEEcCEEEE
Confidence 0 2221 2222234777 88999999998743 333566553 122235789999999
Q ss_pred eeCCCCCcccC
Q 018550 161 CNGHFSVPRLA 171 (354)
Q Consensus 161 AtG~~s~~~~p 171 (354)
|+| ..|+..
T Consensus 244 a~G--~~p~~~ 252 (325)
T 2q7v_A 244 FIG--HVPNTA 252 (325)
T ss_dssp CSC--EEESCG
T ss_pred ccC--CCCChH
Confidence 999 555543
No 239
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.38 E-value=3.4e-07 Score=82.96 Aligned_cols=86 Identities=17% Similarity=0.193 Sum_probs=63.0
Q ss_pred CeEEEEccCCCHHHHHHHHhc---cCCEEEEEEecCC-----------------cc----ccccCCCCC-CeEEecceeE
Q 018550 198 QVVILIGHYASGLDIKRDLAG---FAKEVHIASRSVA-----------------DE----THEKQPGYD-NMWLHSMVER 252 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~---~g~~v~~~~r~~~-----------------~~----~~~~l~~~~-~~~~~~~v~~ 252 (354)
++|+|||+|++|+.+|..|++ .|.+|+++.+++. ++ ..+.+.+.+ +++.+ .++.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~ 80 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEG-TVEK 80 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEEC-EEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEEEEe-eEEE
Confidence 579999999999999999999 8899999998774 00 011122233 45544 7888
Q ss_pred EecCCc-EEEccCc----EEecCEEEEcccCCCccCc
Q 018550 253 ANEDGT-VVFRNGR----VVSADVIMHCTGLTGTSTT 284 (354)
Q Consensus 253 v~~~~~-v~~~~g~----~~~~D~vi~a~G~~~~~p~ 284 (354)
+..+.. |+++++. ++.+|.+|+|+|..+..|.
T Consensus 81 i~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~~~~ 117 (409)
T 3h8l_A 81 IDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLATEL 117 (409)
T ss_dssp EETTTTEEEEECTTSCEEEEECSEEEECCCCEECGGG
T ss_pred EeCCCCEEEEccCCcccceeeCCEEEECCCCCcCccC
Confidence 875543 7777774 3899999999999955443
No 240
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.37 E-value=2.9e-06 Score=73.64 Aligned_cols=98 Identities=21% Similarity=0.271 Sum_probs=70.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||+|+.|+.+|..|++.+.+|+++++.+.+ ..
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~----~~-------------------------------------- 181 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEM----KA-------------------------------------- 181 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSC----CS--------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCccc----Cc--------------------------------------
Confidence 368999999999999999999999999999986532 00
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHH-hCCcceEEeceEEEEEEEeCCCcE-EEEEeec-CCceEEEEeCEE
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFARE-FGVDQVVRLHTEVLNARLVESNKW-KVKSRKK-DDVVEEETFDAV 158 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~v~~~~~v~~i~~~~~~~~-~v~~~~g-~~~~~~~~~d~v 158 (354)
. +.+.+.+.+ .+++ +++++++.++..++ +.. .+.+.++ +++..++.+|.|
T Consensus 182 ---------------------~---~~~~~~l~~~~gv~--v~~~~~v~~i~~~~-~~v~~v~~~~~~~g~~~~i~~D~v 234 (310)
T 1fl2_A 182 ---------------------D---QVLQDKLRSLKNVD--IILNAQTTEVKGDG-SKVVGLEYRDRVSGDIHNIELAGI 234 (310)
T ss_dssp ---------------------C---HHHHHHHHTCTTEE--EESSEEEEEEEESS-SSEEEEEEEETTTCCEEEEECSEE
T ss_pred ---------------------c---HHHHHHHhhCCCeE--EecCCceEEEEcCC-CcEEEEEEEECCCCcEEEEEcCEE
Confidence 0 122233333 4777 89999999998754 433 4666552 233457899999
Q ss_pred EEeeCCCCCccc
Q 018550 159 VVCNGHFSVPRL 170 (354)
Q Consensus 159 IlAtG~~s~~~~ 170 (354)
|+|+| ..|+.
T Consensus 235 i~a~G--~~p~~ 244 (310)
T 1fl2_A 235 FVQIG--LLPNT 244 (310)
T ss_dssp EECSC--EEESC
T ss_pred EEeeC--CccCc
Confidence 99999 55554
No 241
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.36 E-value=1.4e-06 Score=75.61 Aligned_cols=101 Identities=14% Similarity=0.058 Sum_probs=69.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+. .
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~----~-------------------------------------- 180 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR----C-------------------------------------- 180 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC----S--------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC----C--------------------------------------
Confidence 3689999999999999999999999999999864320 0
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEee-cCCceEEEEeCEEEE
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRK-KDDVVEEETFDAVVV 160 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~-g~~~~~~~~~d~vIl 160 (354)
. ..+.+ ...++.+++ +.+++++.++..++++...+.+.+ .++...++.+|.||+
T Consensus 181 -----~---------------~~~~~---~l~~~~gv~--v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~ 235 (311)
T 2q0l_A 181 -----A---------------PITLE---HAKNNDKIE--FLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFI 235 (311)
T ss_dssp -----C---------------HHHHH---HHHTCTTEE--EETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEE
T ss_pred -----C---------------HHHHH---HHhhCCCeE--EEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEE
Confidence 0 22222 122235777 889999999987641222455553 122235789999999
Q ss_pred eeCCCCCcccC
Q 018550 161 CNGHFSVPRLA 171 (354)
Q Consensus 161 AtG~~s~~~~p 171 (354)
|+| ..|..+
T Consensus 236 a~G--~~p~~~ 244 (311)
T 2q0l_A 236 FVG--YDVNNA 244 (311)
T ss_dssp CSC--EEECCG
T ss_pred Eec--CccChh
Confidence 999 566543
No 242
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.36 E-value=3e-07 Score=83.67 Aligned_cols=41 Identities=39% Similarity=0.726 Sum_probs=37.5
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeec
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIY 43 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~ 43 (354)
+||+|||||++|+++|+.|+++|.+|+|+|+++.+||.+..
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~ 41 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTN 41 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEE
Confidence 58999999999999999999999999999999888876543
No 243
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.35 E-value=7.7e-07 Score=81.18 Aligned_cols=85 Identities=16% Similarity=0.259 Sum_probs=64.8
Q ss_pred CeEEEEccCCCHHHHHHHHhc--cCCEEEEEEecCC-----------------cccc----ccCCCCC-CeEEecceeEE
Q 018550 198 QVVILIGHYASGLDIKRDLAG--FAKEVHIASRSVA-----------------DETH----EKQPGYD-NMWLHSMVERA 253 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~--~g~~v~~~~r~~~-----------------~~~~----~~l~~~~-~~~~~~~v~~v 253 (354)
++|+|||+|+.|+.+|..|++ .+.+|+++.+.+. ++.. +.+.+.+ +++ ...++.+
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~-~~~v~~i 81 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFI-NEKAESI 81 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEE-CSCEEEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCEEE-EEEEEEE
Confidence 689999999999999999999 6789999999774 1111 1112334 444 4588888
Q ss_pred ecCCc-EEEccCcEEecCEEEEcccCCCccC
Q 018550 254 NEDGT-VVFRNGRVVSADVIMHCTGLTGTST 283 (354)
Q Consensus 254 ~~~~~-v~~~~g~~~~~D~vi~a~G~~~~~p 283 (354)
..+.. |.+++++++.+|.+|+|||..++.|
T Consensus 82 d~~~~~v~~~~g~~i~~d~liiAtG~~~~~p 112 (430)
T 3h28_A 82 DPDANTVTTQSGKKIEYDYLVIATGPKLVFG 112 (430)
T ss_dssp ETTTTEEEETTCCEEECSEEEECCCCEEECC
T ss_pred ECCCCEEEECCCcEEECCEEEEcCCcccccC
Confidence 76544 8888888899999999999995555
No 244
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.34 E-value=3.6e-07 Score=81.17 Aligned_cols=42 Identities=40% Similarity=0.684 Sum_probs=39.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeC-CCccceeec
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKG-EQVGGSWIY 43 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~-~~~gg~~~~ 43 (354)
.++|+|||||++|+++|..|.+.|++|+|+|++ +.+||.+..
T Consensus 44 ~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t 86 (376)
T 2e1m_A 44 PKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKT 86 (376)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCE
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceee
Confidence 468999999999999999999999999999999 899998765
No 245
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.34 E-value=2.2e-06 Score=74.75 Aligned_cols=98 Identities=20% Similarity=0.217 Sum_probs=71.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||+|+.|+.+|..|.+.+.+|+++++.+.+..
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~------------------------------------------ 191 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA------------------------------------------ 191 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS------------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc------------------------------------------
Confidence 36899999999999999999999999999998653200
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEee-cCCceEEEEeCEEEE
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRK-KDDVVEEETFDAVVV 160 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~-g~~~~~~~~~d~vIl 160 (354)
. .. ++.+..++.+++ +.+++++.++..++ +...+.+.+ .+++..++.+|.||+
T Consensus 192 ------~--------------~~---~~~~~~~~~gv~--~~~~~~v~~i~~~~-~~~~v~~~~~~~g~~~~~~~D~vv~ 245 (323)
T 3f8d_A 192 ------Q--------------PI---YVETVKKKPNVE--FVLNSVVKEIKGDK-VVKQVVVENLKTGEIKELNVNGVFI 245 (323)
T ss_dssp ------C--------------HH---HHHHHHTCTTEE--EECSEEEEEEEESS-SEEEEEEEETTTCCEEEEECSEEEE
T ss_pred ------C--------------HH---HHHHHHhCCCcE--EEeCCEEEEEeccC-ceeEEEEEECCCCceEEEEcCEEEE
Confidence 0 22 223333344777 89999999998764 555577766 122235789999999
Q ss_pred eeCCCCCcc
Q 018550 161 CNGHFSVPR 169 (354)
Q Consensus 161 AtG~~s~~~ 169 (354)
|+| ..|.
T Consensus 246 a~G--~~p~ 252 (323)
T 3f8d_A 246 EIG--FDPP 252 (323)
T ss_dssp CCC--EECC
T ss_pred EEC--CCCC
Confidence 999 5555
No 246
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.34 E-value=1.2e-06 Score=76.10 Aligned_cols=101 Identities=14% Similarity=0.117 Sum_probs=71.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||+|+.|+.+|..|.+.+.+|+++++.+.+ ..
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~----~~-------------------------------------- 184 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEF----RA-------------------------------------- 184 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSC----BS--------------------------------------
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCC----CC--------------------------------------
Confidence 368999999999999999999999999999986532 00
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEe
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVC 161 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlA 161 (354)
. .. .+.+..++.+++ +++++++.++..+++....+.+...+++..++.+|.||+|
T Consensus 185 ------~--------------~~---~~~~~~~~~gv~--~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a 239 (315)
T 3r9u_A 185 ------A--------------PS---TVEKVKKNEKIE--LITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTF 239 (315)
T ss_dssp ------C--------------HH---HHHHHHHCTTEE--EECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEEC
T ss_pred ------C--------------HH---HHHHHHhcCCeE--EEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEE
Confidence 0 22 223333556787 8999999999876522233555522233458899999999
Q ss_pred eCCCCCcccC
Q 018550 162 NGHFSVPRLA 171 (354)
Q Consensus 162 tG~~s~~~~p 171 (354)
+| ..|...
T Consensus 240 ~G--~~p~~~ 247 (315)
T 3r9u_A 240 VG--LNVRNE 247 (315)
T ss_dssp SC--EEECCG
T ss_pred Ec--CCCCch
Confidence 99 555543
No 247
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.33 E-value=4.1e-07 Score=82.79 Aligned_cols=41 Identities=39% Similarity=0.652 Sum_probs=37.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcC-CcEEEEeeCCCccceee
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREG-HTVVVYEKGEQVGGSWI 42 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g-~~v~lie~~~~~gg~~~ 42 (354)
+++|+|||||++|+++|..|++.| .+|+|+|+++.+||.+.
T Consensus 6 ~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~ 47 (424)
T 2b9w_A 6 DSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCH 47 (424)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCC
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCccc
Confidence 478999999999999999999999 89999999999987654
No 248
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.33 E-value=1.9e-06 Score=75.60 Aligned_cols=101 Identities=17% Similarity=0.182 Sum_probs=70.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||+|..|+.+|..|++.|.+|+++++.+.+. .
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~----~-------------------------------------- 196 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFR----A-------------------------------------- 196 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCC----S--------------------------------------
T ss_pred CCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCC----c--------------------------------------
Confidence 3689999999999999999999999999999865320 0
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCC-cE-EEEEeec-CCceEEEEeCEE
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESN-KW-KVKSRKK-DDVVEEETFDAV 158 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~-~~-~v~~~~g-~~~~~~~~~d~v 158 (354)
. ..+. ++..++.+++ +++++++.++..++++ .. .+.+.+. ++...++.+|.|
T Consensus 197 ------~--------------~~~~---~~~~~~~gv~--i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~v 251 (333)
T 1vdc_A 197 ------S--------------KIMQ---QRALSNPKID--VIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGL 251 (333)
T ss_dssp ------C--------------HHHH---HHHHTCTTEE--EECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEE
T ss_pred ------c--------------HHHH---HHHHhCCCee--EecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEE
Confidence 0 1111 2233445777 8889999999875421 32 3555532 222358999999
Q ss_pred EEeeCCCCCcccC
Q 018550 159 VVCNGHFSVPRLA 171 (354)
Q Consensus 159 IlAtG~~s~~~~p 171 (354)
|+|+| ..|...
T Consensus 252 i~a~G--~~p~~~ 262 (333)
T 1vdc_A 252 FFAIG--HEPATK 262 (333)
T ss_dssp EECSC--EEESCG
T ss_pred EEEeC--CccchH
Confidence 99999 555543
No 249
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.32 E-value=4.2e-07 Score=83.51 Aligned_cols=42 Identities=24% Similarity=0.339 Sum_probs=38.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeec
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIY 43 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~ 43 (354)
.+||+|||||++|+++|..|++.|++|+++|+++.+||.+..
T Consensus 11 ~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 52 (453)
T 2bcg_G 11 DYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAAS 52 (453)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc
Confidence 368999999999999999999999999999999999987643
No 250
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.32 E-value=3.6e-07 Score=83.19 Aligned_cols=40 Identities=38% Similarity=0.629 Sum_probs=37.0
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceee
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWI 42 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~ 42 (354)
+||+|||||++|+++|+.|+++|.+|+|+|+++.+||.+.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~ 40 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFT 40 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCcee
Confidence 5899999999999999999999999999999988887653
No 251
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.31 E-value=2.9e-07 Score=86.03 Aligned_cols=40 Identities=38% Similarity=0.643 Sum_probs=37.6
Q ss_pred CeEEEEcCChHHHHHHHHHHHcC-CcEEEEeeCCCccceee
Q 018550 3 RHVAVIGAGAAGLVVGHELLREG-HTVVVYEKGEQVGGSWI 42 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g-~~v~lie~~~~~gg~~~ 42 (354)
++|+|||||++|++||..|++.| .+|+|+|+++.+||.+.
T Consensus 9 ~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~ 49 (516)
T 1rsg_A 9 KKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQ 49 (516)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCC
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCcee
Confidence 68999999999999999999999 99999999999998764
No 252
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.31 E-value=7.3e-07 Score=77.34 Aligned_cols=87 Identities=15% Similarity=0.184 Sum_probs=60.9
Q ss_pred eEEEEccCCCHHHHHHHHhccCCEEEEEEecCCc-----------------------cccccCCCCC-CeEEecceeEEe
Q 018550 199 VVILIGHYASGLDIKRDLAGFAKEVHIASRSVAD-----------------------ETHEKQPGYD-NMWLHSMVERAN 254 (354)
Q Consensus 199 ~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~~-----------------------~~~~~l~~~~-~~~~~~~v~~v~ 254 (354)
.|+|||+|+.|+.+|..+++.|.+|+++.+...- ..++++.+.. ..+....+..+.
T Consensus 8 DVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYYEKTVVMIT 87 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEEECCEEEEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEEeeEEEEee
Confidence 4899999999999999999999999999975430 0111223333 333444444444
Q ss_pred c--CC--cEEEccCcEEecCEEEEcccCCCccCcc
Q 018550 255 E--DG--TVVFRNGRVVSADVIMHCTGLTGTSTTT 285 (354)
Q Consensus 255 ~--~~--~v~~~~g~~~~~D~vi~a~G~~~~~p~~ 285 (354)
. ++ .+.+.+|+++.+|.||+|||.+|..|..
T Consensus 88 ~~~~~~~~v~~~~g~~~~a~~liiATGs~p~~p~i 122 (304)
T 4fk1_A 88 KQSTGLFEIVTKDHTKYLAERVLLATGMQEEFPSI 122 (304)
T ss_dssp ECTTSCEEEEETTCCEEEEEEEEECCCCEEECCSC
T ss_pred ecCCCcEEEEECCCCEEEeCEEEEccCCccccccc
Confidence 2 22 2777888999999999999998555543
No 253
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.30 E-value=5.9e-06 Score=72.02 Aligned_cols=97 Identities=14% Similarity=0.133 Sum_probs=70.1
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhccccccccccC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (354)
++|+|||+|+.|+.+|..|++.+.+|+++++.+.+. .
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~----~--------------------------------------- 192 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYM----C--------------------------------------- 192 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCC----S---------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccC----C---------------------------------------
Confidence 689999999999999999999999999999864320 0
Q ss_pred CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCC-cEEEEEee-cCCceEEEEeCEEEE
Q 018550 83 YPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESN-KWKVKSRK-KDDVVEEETFDAVVV 160 (354)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~-~~~v~~~~-g~~~~~~~~~d~vIl 160 (354)
. ..+ .+.+.+.+++ +++++++.++..++ + ...+.+.+ .++...++.+|.||+
T Consensus 193 -----~--------------~~l----~~~l~~~gv~--i~~~~~v~~i~~~~-~~v~~v~~~~~~~g~~~~i~~D~vi~ 246 (319)
T 3cty_A 193 -----E--------------NAY----VQEIKKRNIP--YIMNAQVTEIVGDG-KKVTGVKYKDRTTGEEKLIETDGVFI 246 (319)
T ss_dssp -----C--------------HHH----HHHHHHTTCC--EECSEEEEEEEESS-SSEEEEEEEETTTCCEEEECCSEEEE
T ss_pred -----C--------------HHH----HHHHhcCCcE--EEcCCeEEEEecCC-ceEEEEEEEEcCCCceEEEecCEEEE
Confidence 0 222 2333467888 99999999998764 3 23455542 122235789999999
Q ss_pred eeCCCCCccc
Q 018550 161 CNGHFSVPRL 170 (354)
Q Consensus 161 AtG~~s~~~~ 170 (354)
|+| ..|+.
T Consensus 247 a~G--~~p~~ 254 (319)
T 3cty_A 247 YVG--LIPQT 254 (319)
T ss_dssp CCC--EEECC
T ss_pred eeC--CccCh
Confidence 999 55554
No 254
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.29 E-value=4.8e-07 Score=84.67 Aligned_cols=42 Identities=33% Similarity=0.484 Sum_probs=38.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeec
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIY 43 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~ 43 (354)
+++|+|||||++|+++|..|++.|++|+|+|+++.+||.+..
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t 45 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYT 45 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCE
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceee
Confidence 478999999999999999999999999999999999887643
No 255
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.29 E-value=5.8e-07 Score=80.47 Aligned_cols=42 Identities=26% Similarity=0.441 Sum_probs=39.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeec
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIY 43 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~ 43 (354)
.++|+|||||++|+++|..|++.|.+|+|+|+++.+||.+..
T Consensus 29 ~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~ 70 (397)
T 3hdq_A 29 GFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYD 70 (397)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCC
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccce
Confidence 468999999999999999999999999999999999998874
No 256
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.27 E-value=6.3e-07 Score=80.87 Aligned_cols=42 Identities=24% Similarity=0.421 Sum_probs=39.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHHc-CCcEEEEeeCCCccceeec
Q 018550 2 FRHVAVIGAGAAGLVVGHELLRE-GHTVVVYEKGEQVGGSWIY 43 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~-g~~v~lie~~~~~gg~~~~ 43 (354)
+++|+|||||++|+++|..|++. |.+|+|+|+++.+||.+..
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~ 49 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYS 49 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCE
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeee
Confidence 47899999999999999999999 9999999999999998865
No 257
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.26 E-value=1.4e-06 Score=76.60 Aligned_cols=101 Identities=16% Similarity=0.160 Sum_probs=69.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||+|+.|+.+|..|++.+.+|+++++.+.+. .
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~----~-------------------------------------- 192 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFR----A-------------------------------------- 192 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCS----S--------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCC----c--------------------------------------
Confidence 3689999999999999999999999999999864320 0
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeec-CCceEEEEeCEEEE
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKK-DDVVEEETFDAVVV 160 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g-~~~~~~~~~d~vIl 160 (354)
. ..+. .+..++.+++ +.+++++.++..++ +...+.+.+. ++...++.+|.||+
T Consensus 193 -----~---------------~~~~---~~~~~~~gV~--v~~~~~v~~i~~~~-~~~~v~~~~~~~g~~~~i~~D~vi~ 246 (335)
T 2a87_A 193 -----S---------------KIML---DRARNNDKIR--FLTNHTVVAVDGDT-TVTGLRVRDTNTGAETTLPVTGVFV 246 (335)
T ss_dssp -----C---------------TTHH---HHHHHCTTEE--EECSEEEEEEECSS-SCCEEEEEEETTSCCEEECCSCEEE
T ss_pred -----c---------------HHHH---HHHhccCCcE--EEeCceeEEEecCC-cEeEEEEEEcCCCceEEeecCEEEE
Confidence 0 1111 1223446777 88999999998654 3333444431 12235789999999
Q ss_pred eeCCCCCcccCC
Q 018550 161 CNGHFSVPRLAQ 172 (354)
Q Consensus 161 AtG~~s~~~~p~ 172 (354)
|+| ..|....
T Consensus 247 a~G--~~p~~~~ 256 (335)
T 2a87_A 247 AIG--HEPRSGL 256 (335)
T ss_dssp CSC--EEECCTT
T ss_pred ccC--CccChhH
Confidence 999 6665443
No 258
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.24 E-value=8.4e-07 Score=82.37 Aligned_cols=40 Identities=38% Similarity=0.550 Sum_probs=37.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCcccee
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSW 41 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~ 41 (354)
.++|+|||||++|+++|..|++.|++|+|+|+.+.+||.+
T Consensus 11 ~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~ 50 (489)
T 2jae_A 11 SHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRV 50 (489)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCce
Confidence 4789999999999999999999999999999999999864
No 259
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.22 E-value=6e-06 Score=72.24 Aligned_cols=99 Identities=17% Similarity=0.085 Sum_probs=72.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||+|+.|+.+|..|++.+.+|+++++.+.+ ..
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~----~~-------------------------------------- 191 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKF----RA-------------------------------------- 191 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSC----SS--------------------------------------
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcC----Cc--------------------------------------
Confidence 368999999999999999999999999999986532 00
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeec-CCceEEEEeCEEEE
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKK-DDVVEEETFDAVVV 160 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g-~~~~~~~~~d~vIl 160 (354)
. ... .+.+.+.+++ ++.++++.++..++ +...+++.++ .++..++.+|.||+
T Consensus 192 -------------------~-~~~----~~~l~~~gv~--~~~~~~v~~i~~~~-~~~~v~~~~~~~g~~~~~~~D~vv~ 244 (332)
T 3lzw_A 192 -------------------H-EHS----VENLHASKVN--VLTPFVPAELIGED-KIEQLVLEEVKGDRKEILEIDDLIV 244 (332)
T ss_dssp -------------------C-HHH----HHHHHHSSCE--EETTEEEEEEECSS-SCCEEEEEETTSCCEEEEECSEEEE
T ss_pred -------------------c-HHH----HHHHhcCCeE--EEeCceeeEEecCC-ceEEEEEEecCCCceEEEECCEEEE
Confidence 0 111 1224567888 99999999998765 4556666663 22346889999999
Q ss_pred eeCCCCCcccC
Q 018550 161 CNGHFSVPRLA 171 (354)
Q Consensus 161 AtG~~s~~~~p 171 (354)
|+| ..|..+
T Consensus 245 a~G--~~p~~~ 253 (332)
T 3lzw_A 245 NYG--FVSSLG 253 (332)
T ss_dssp CCC--EECCCG
T ss_pred eec--cCCCch
Confidence 999 555443
No 260
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.21 E-value=7.5e-07 Score=81.80 Aligned_cols=40 Identities=40% Similarity=0.663 Sum_probs=37.4
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceee
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWI 42 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~ 42 (354)
++|+|||||++|+++|..|++.|++|+|+|+++.+||.+.
T Consensus 6 ~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~ 45 (453)
T 2yg5_A 6 RDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTW 45 (453)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCcee
Confidence 6899999999999999999999999999999988987763
No 261
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.19 E-value=9.4e-07 Score=80.60 Aligned_cols=35 Identities=34% Similarity=0.581 Sum_probs=31.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 1 MFRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 1 ~~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
|+++|+|||||++|+++|..|+++|++|+|||+.+
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 45799999999999999999999999999999965
No 262
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.19 E-value=9.6e-07 Score=81.69 Aligned_cols=40 Identities=38% Similarity=0.620 Sum_probs=36.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCcccee
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSW 41 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~ 41 (354)
.++|+|||||++|+++|..|++.|++|+|+|+++.+||.+
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~ 55 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAV 55 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCcee
Confidence 4789999999999999999999999999999999998754
No 263
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.19 E-value=1e-06 Score=78.58 Aligned_cols=42 Identities=29% Similarity=0.470 Sum_probs=38.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeec
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIY 43 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~ 43 (354)
+++|+|||||++|+++|..|++.|.+|+|+|+++.+||.+..
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~ 42 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYT 42 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCE
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEe
Confidence 368999999999999999999999999999999999988754
No 264
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.18 E-value=1e-05 Score=70.23 Aligned_cols=34 Identities=21% Similarity=0.424 Sum_probs=31.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~ 185 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRD 185 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCeEEEECCChHHHHHHHHHHHhCCeeeeecccc
Confidence 3689999999999999999999999999999753
No 265
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.18 E-value=1.4e-06 Score=78.03 Aligned_cols=42 Identities=29% Similarity=0.652 Sum_probs=39.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeec
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIY 43 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~ 43 (354)
+++|+|||||++|+++|..|++.|.+|+|+|+++.+||.+..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~ 44 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYD 44 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCcccc
Confidence 369999999999999999999999999999999999988754
No 266
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.18 E-value=1.1e-05 Score=77.93 Aligned_cols=100 Identities=24% Similarity=0.198 Sum_probs=72.2
Q ss_pred CeEEEEc--CChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhccccccccc
Q 018550 3 RHVAVIG--AGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGF 80 (354)
Q Consensus 3 ~~vvIIG--~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (354)
++|+||| +|+.|+.+|..|++.|.+|+++++.+.+......
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~~------------------------------------- 566 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTNN------------------------------------- 566 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGGGG-------------------------------------
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccccccccc-------------------------------------
Confidence 5799999 9999999999999999999999987543211110
Q ss_pred cCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEE
Q 018550 81 QAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVV 160 (354)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIl 160 (354)
..+...+.+.+++.|++ ++.+++|+++.. +...+.... .+...++.+|.||+
T Consensus 567 ----------------------~~~~~~l~~~l~~~GV~--i~~~~~V~~i~~---~~~~v~~~~-~~~~~~i~aD~VV~ 618 (690)
T 3k30_A 567 ----------------------TFEVNRIQRRLIENGVA--RVTDHAVVAVGA---GGVTVRDTY-ASIERELECDAVVM 618 (690)
T ss_dssp ----------------------GTCHHHHHHHHHHTTCE--EEESEEEEEEET---TEEEEEETT-TCCEEEEECSEEEE
T ss_pred ----------------------chhHHHHHHHHHHCCCE--EEcCcEEEEEEC---CeEEEEEcc-CCeEEEEECCEEEE
Confidence 12235566677778999 999999999974 333444321 11235789999999
Q ss_pred eeCCCCCcc
Q 018550 161 CNGHFSVPR 169 (354)
Q Consensus 161 AtG~~s~~~ 169 (354)
|+| ..|.
T Consensus 619 A~G--~~p~ 625 (690)
T 3k30_A 619 VTA--RLPR 625 (690)
T ss_dssp ESC--EEEC
T ss_pred CCC--CCCC
Confidence 999 5554
No 267
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.17 E-value=1.3e-06 Score=81.32 Aligned_cols=40 Identities=40% Similarity=0.618 Sum_probs=37.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCcccee
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSW 41 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~ 41 (354)
.++|+|||||++|+++|..|++.|++|+|+|+++.+||.+
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~ 52 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKL 52 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCce
Confidence 3789999999999999999999999999999999998764
No 268
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.14 E-value=1.5e-06 Score=80.26 Aligned_cols=41 Identities=24% Similarity=0.441 Sum_probs=37.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcC--CcEEEEeeCCCccceee
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREG--HTVVVYEKGEQVGGSWI 42 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g--~~v~lie~~~~~gg~~~ 42 (354)
+++|+|||||++|+++|+.|++.| .+|+|+|+++.+||.+.
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~ 46 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVA 46 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCC
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeE
Confidence 479999999999999999999999 99999999888887543
No 269
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.14 E-value=1.4e-06 Score=81.02 Aligned_cols=40 Identities=30% Similarity=0.518 Sum_probs=37.3
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceee
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWI 42 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~ 42 (354)
++|+|||||++|+++|..|++.|++|+|+|+++.+||.+.
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~ 79 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSW 79 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcce
Confidence 6899999999999999999999999999999999987653
No 270
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.14 E-value=2.1e-06 Score=79.49 Aligned_cols=42 Identities=29% Similarity=0.392 Sum_probs=38.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcC-CcEEEEeeCCCccceeec
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREG-HTVVVYEKGEQVGGSWIY 43 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g-~~v~lie~~~~~gg~~~~ 43 (354)
+++|+|||||++|+++|..|++.| .+|+|+|+++.+||.+..
T Consensus 9 ~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~ 51 (484)
T 4dsg_A 9 TPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRS 51 (484)
T ss_dssp SCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCE
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeee
Confidence 478999999999999999999998 799999999999988765
No 271
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.09 E-value=1.9e-05 Score=73.70 Aligned_cols=98 Identities=21% Similarity=0.281 Sum_probs=70.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhcccccccccc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQ 81 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
.++|+|||+|..|+.+|..|++.+.+|+++++.+.+. .
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~----~-------------------------------------- 392 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK----A-------------------------------------- 392 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCC----S--------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccC----c--------------------------------------
Confidence 3689999999999999999999999999999865320 0
Q ss_pred CCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHH-hCCcceEEeceEEEEEEEeCCCcE-EEEEeec-CCceEEEEeCEE
Q 018550 82 AYPFVARNYEGSVDLRRYPGHEEVLRYLQNFARE-FGVDQVVRLHTEVLNARLVESNKW-KVKSRKK-DDVVEEETFDAV 158 (354)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~v~~~~~v~~i~~~~~~~~-~v~~~~g-~~~~~~~~~d~v 158 (354)
. ..+.+.+.+ .+++ ++++++++++..++ +.. .+.+.+. ++...++.+|.|
T Consensus 393 ---------------------~---~~l~~~l~~~~gV~--v~~~~~v~~i~~~~-~~v~~v~~~~~~~g~~~~i~~D~v 445 (521)
T 1hyu_A 393 ---------------------D---QVLQDKVRSLKNVD--IILNAQTTEVKGDG-SKVVGLEYRDRVSGDIHSVALAGI 445 (521)
T ss_dssp ---------------------C---HHHHHHHTTCTTEE--EECSEEEEEEEECS-SSEEEEEEEETTTCCEEEEECSEE
T ss_pred ---------------------C---HHHHHHHhcCCCcE--EEeCCEEEEEEcCC-CcEEEEEEEeCCCCceEEEEcCEE
Confidence 0 123333334 4677 89999999998754 443 4666552 233457899999
Q ss_pred EEeeCCCCCccc
Q 018550 159 VVCNGHFSVPRL 170 (354)
Q Consensus 159 IlAtG~~s~~~~ 170 (354)
++|+| ..|+.
T Consensus 446 i~a~G--~~pn~ 455 (521)
T 1hyu_A 446 FVQIG--LLPNT 455 (521)
T ss_dssp EECCC--EEESC
T ss_pred EECcC--CCCCc
Confidence 99999 55554
No 272
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.08 E-value=2.4e-06 Score=79.47 Aligned_cols=41 Identities=41% Similarity=0.603 Sum_probs=37.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceee
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWI 42 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~ 42 (354)
+++|+|||||++|+++|..|++.|.+|+|+|+++.+||.+.
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~ 73 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVR 73 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcee
Confidence 47899999999999999999999999999999999998653
No 273
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.05 E-value=3e-06 Score=73.65 Aligned_cols=87 Identities=10% Similarity=0.111 Sum_probs=57.5
Q ss_pred eEEEEccCCCHHHHHHHHhccCCEEEEEEecCCccc------ccc-------------------CCCCC-CeEEecceeE
Q 018550 199 VVILIGHYASGLDIKRDLAGFAKEVHIASRSVADET------HEK-------------------QPGYD-NMWLHSMVER 252 (354)
Q Consensus 199 ~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~------~~~-------------------l~~~~-~~~~~~~v~~ 252 (354)
.|+|||+|+.|+.+|..+++.|.+|+++.+...-.. ... ..+.. .+.....+..
T Consensus 8 DvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQYGDIKSV 87 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEEEECCCCEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCeeecccccCCcCCccccchHHHHHHHHHHHhhccccccceeeeee
Confidence 599999999999999999999999999987643000 000 01112 2333333333
Q ss_pred EecC-CcEEEccCcEEecCEEEEcccCCCccCcc
Q 018550 253 ANED-GTVVFRNGRVVSADVIMHCTGLTGTSTTT 285 (354)
Q Consensus 253 v~~~-~~v~~~~g~~~~~D~vi~a~G~~~~~p~~ 285 (354)
.... ..+...+++++.+|.+|+|||.+|..|..
T Consensus 88 ~~~~~~~~~~~~~~~~~~d~liiAtGs~~~~~~i 121 (312)
T 4gcm_A 88 EDKGEYKVINFGNKELTAKAVIIATGAEYKKIGV 121 (312)
T ss_dssp EECSSCEEEECSSCEEEEEEEEECCCEEECCCCC
T ss_pred eeeecceeeccCCeEEEeceeEEcccCccCcCCC
Confidence 3322 22556677899999999999988554443
No 274
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.02 E-value=4.1e-06 Score=76.40 Aligned_cols=42 Identities=19% Similarity=0.275 Sum_probs=38.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeec
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIY 43 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~ 43 (354)
.++|+|||+|++|+++|..|++.|++|+++|+++.+||.+..
T Consensus 6 ~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s 47 (433)
T 1d5t_A 6 EYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSS 47 (433)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccc
Confidence 478999999999999999999999999999999999988754
No 275
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=98.02 E-value=6.1e-06 Score=77.64 Aligned_cols=72 Identities=14% Similarity=0.095 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHhCCcceEEeceEEEEEEEeC---CC-cEEEEEeecCCceEEEEeC-EEEEeeCCCCCcccCCCCCCC
Q 018550 104 EVLRYLQNFAREFGVDQVVRLHTEVLNARLVE---SN-KWKVKSRKKDDVVEEETFD-AVVVCNGHFSVPRLAQVPGID 177 (354)
Q Consensus 104 ~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~---~~-~~~v~~~~g~~~~~~~~~d-~vIlAtG~~s~~~~p~~~g~~ 177 (354)
....|+.....+.++. +.+++.|++|..++ ++ ...|...+..+...++.++ -||+|+|+...|.++.+.|+.
T Consensus 228 aa~ayL~p~~~r~NL~--V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqLL~lSGIG 304 (583)
T 3qvp_A 228 AAREWLLPNYQRPNLQ--VLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILEYSGIG 304 (583)
T ss_dssp HHHHHTTTTTTCTTEE--EECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHHHHHTTBS
T ss_pred HHHHHHHHhhcCCCcE--EEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHHHHHcCCC
Confidence 3445555544455666 99999999999873 12 2335444323445678886 699999998888877666543
No 276
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.01 E-value=5.8e-06 Score=73.51 Aligned_cols=34 Identities=29% Similarity=0.468 Sum_probs=32.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
++||+|||||++|+++|+.|+++|.+|+|+|+..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 4699999999999999999999999999999964
No 277
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=97.98 E-value=4e-06 Score=74.10 Aligned_cols=80 Identities=21% Similarity=0.136 Sum_probs=59.1
Q ss_pred CeEEEEccCCCHHHHHHHHhccCCEEEEEEecCCc--------------------------------------cccccC-
Q 018550 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSVAD--------------------------------------ETHEKQ- 238 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~~--------------------------------------~~~~~l- 238 (354)
.+|+|||+|+.|+.+|..|++.|.+|+++.+.+.. .....+
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 83 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAYLA 83 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHHHH
Confidence 46999999999999999999999999999987520 000000
Q ss_pred ---CCCC-CeEEecceeEEecCCc----EEEccCcEEecCEEEEcccC
Q 018550 239 ---PGYD-NMWLHSMVERANEDGT----VVFRNGRVVSADVIMHCTGL 278 (354)
Q Consensus 239 ---~~~~-~~~~~~~v~~v~~~~~----v~~~~g~~~~~D~vi~a~G~ 278 (354)
++.+ +++.++.|+.+..++. |.+.++ ++.+|.||+|+|.
T Consensus 84 ~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~ 130 (357)
T 4a9w_A 84 QYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGT 130 (357)
T ss_dssp HHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCS
T ss_pred HHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCC
Confidence 1122 6778889999875443 444455 8999999999995
No 278
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.96 E-value=5.8e-06 Score=75.57 Aligned_cols=40 Identities=20% Similarity=0.377 Sum_probs=37.5
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceee
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWI 42 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~ 42 (354)
+||+|||+|++|+++|..|++.|.+|+++|+++.+||.+.
T Consensus 21 ~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~ 60 (475)
T 3p1w_A 21 YDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETA 60 (475)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCcc
Confidence 6899999999999999999999999999999999987654
No 279
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.94 E-value=9e-06 Score=76.29 Aligned_cols=88 Identities=19% Similarity=0.202 Sum_probs=64.4
Q ss_pred CeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC----------cc-----------------------cc---------
Q 018550 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA----------DE-----------------------TH--------- 235 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~----------~~-----------------------~~--------- 235 (354)
.+|+|||+|++|+.+|..|++.|.+|+++.+.+. .. ..
T Consensus 22 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~ei 101 (549)
T 4ap3_A 22 YDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPEI 101 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHHHH
T ss_pred CCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHHHH
Confidence 5799999999999999999999999999998542 00 00
Q ss_pred ----cc-CCCCC---CeEEecceeEEecC-C----cEEEccCcEEecCEEEEccc--CCCccCcc
Q 018550 236 ----EK-QPGYD---NMWLHSMVERANED-G----TVVFRNGRVVSADVIMHCTG--LTGTSTTT 285 (354)
Q Consensus 236 ----~~-l~~~~---~~~~~~~v~~v~~~-~----~v~~~~g~~~~~D~vi~a~G--~~~~~p~~ 285 (354)
.. +.+.+ .+++++.|+++..+ . .|++.+|+++.+|.||+||| ..|..|..
T Consensus 102 ~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~~p~i 166 (549)
T 4ap3_A 102 LAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNANTPAF 166 (549)
T ss_dssp HHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECCCCCC
T ss_pred HHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCCCCCC
Confidence 00 01112 57888899988732 2 37788888999999999999 45444443
No 280
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.93 E-value=7.2e-06 Score=78.84 Aligned_cols=40 Identities=33% Similarity=0.544 Sum_probs=37.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCcccee
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSW 41 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~ 41 (354)
.++|+|||+|++|+++|..|++.|++|+|+|+.+.+||.+
T Consensus 107 ~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~ 146 (662)
T 2z3y_A 107 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRV 146 (662)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTC
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCcc
Confidence 4789999999999999999999999999999998888754
No 281
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.93 E-value=1.5e-05 Score=74.64 Aligned_cols=88 Identities=16% Similarity=0.118 Sum_probs=64.5
Q ss_pred CeEEEEccCCCHHHHHHHHh-ccCCEEEEEEecCC----------cc---------------------------------
Q 018550 198 QVVILIGHYASGLDIKRDLA-GFAKEVHIASRSVA----------DE--------------------------------- 233 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~-~~g~~v~~~~r~~~----------~~--------------------------------- 233 (354)
.+|+|||+|++|+.+|..|+ +.|.+|+++.+.+. +.
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~e 88 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQPE 88 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHHH
Confidence 46999999999999999999 89999999998642 00
Q ss_pred ccc---c-CCCCC---CeEEecceeEEecC-C----cEEEccCcEEecCEEEEcccC--CCccCcc
Q 018550 234 THE---K-QPGYD---NMWLHSMVERANED-G----TVVFRNGRVVSADVIMHCTGL--TGTSTTT 285 (354)
Q Consensus 234 ~~~---~-l~~~~---~~~~~~~v~~v~~~-~----~v~~~~g~~~~~D~vi~a~G~--~~~~p~~ 285 (354)
... . +.+.+ .+++++.|+++..+ + .|++++|+++.+|.||+|+|. .|..|..
T Consensus 89 i~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~~p~i 154 (540)
T 3gwf_A 89 ILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINFPNL 154 (540)
T ss_dssp HHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBCCCCC
T ss_pred HHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCCCCCC
Confidence 000 0 01112 57888999988733 2 277788888999999999994 5444443
No 282
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.92 E-value=1e-05 Score=71.30 Aligned_cols=36 Identities=36% Similarity=0.505 Sum_probs=33.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQV 37 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~ 37 (354)
+++|+|||||+||+.+|..|++.|.+|+|+|+++..
T Consensus 1 m~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~ 36 (443)
T 3g5s_A 1 MERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKR 36 (443)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTS
T ss_pred CCCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCc
Confidence 478999999999999999999999999999997644
No 283
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.91 E-value=8.6e-06 Score=79.87 Aligned_cols=40 Identities=33% Similarity=0.544 Sum_probs=37.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCcccee
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSW 41 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~ 41 (354)
.++|+|||+|++|+++|..|++.|++|+|+|+.+.+||.+
T Consensus 278 ~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~~ 317 (852)
T 2xag_A 278 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRV 317 (852)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCce
Confidence 4689999999999999999999999999999998888753
No 284
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.91 E-value=7.6e-06 Score=75.55 Aligned_cols=41 Identities=27% Similarity=0.504 Sum_probs=37.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCC-cEEEEeeCCCccceee
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGH-TVVVYEKGEQVGGSWI 42 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~-~v~lie~~~~~gg~~~ 42 (354)
.++|+|||||++|+++|..|++.|+ +|+|+|+++.+||.+.
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~ 45 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMH 45 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCcee
Confidence 4789999999999999999999999 8999999988887654
No 285
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.90 E-value=2.7e-05 Score=75.69 Aligned_cols=101 Identities=13% Similarity=0.124 Sum_probs=69.9
Q ss_pred CeEEEEc--CChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhccccccccc
Q 018550 3 RHVAVIG--AGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGF 80 (354)
Q Consensus 3 ~~vvIIG--~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (354)
++|+||| +|..|+.+|..|++.|.+|+++++.+ +.......
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~~~~~------------------------------------ 571 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LANYMHFT------------------------------------ 571 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHHHHHT------------------------------------
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-cccccccc------------------------------------
Confidence 6899999 99999999999999999999999865 32110000
Q ss_pred cCCCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEe--ecC-----------
Q 018550 81 QAYPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSR--KKD----------- 147 (354)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~--~g~----------- 147 (354)
.. ...+.+.+++.|++ +++++++.++.. +...+... ++.
T Consensus 572 ----------------------~~-~~~~~~~l~~~GV~--i~~~~~v~~i~~---~~v~~~~~~~~~~~~~~~~~~~~~ 623 (729)
T 1o94_A 572 ----------------------LE-YPNMMRRLHELHVE--ELGDHFCSRIEP---GRMEIYNIWGDGSKRTYRGPGVSP 623 (729)
T ss_dssp ----------------------TC-HHHHHHHHHHTTCE--EECSEEEEEEET---TEEEEEETTCSCSCCCCCCTTSCS
T ss_pred ----------------------cc-HHHHHHHHHhCCCE--EEcCcEEEEEEC---CeEEEEEecCCceEEecccccccc
Confidence 00 23455666778998 999999999863 33334321 111
Q ss_pred ----CceEEEEeCEEEEeeCCCCCccc
Q 018550 148 ----DVVEEETFDAVVVCNGHFSVPRL 170 (354)
Q Consensus 148 ----~~~~~~~~d~vIlAtG~~s~~~~ 170 (354)
+.++.+.+|.||+|+| ..|..
T Consensus 624 ~~~~~~~~~i~aD~Vv~a~G--~~p~~ 648 (729)
T 1o94_A 624 RDANTSHRWIEFDSLVLVTG--RHSEC 648 (729)
T ss_dssp SCCCCCCEEEECSEEEEESC--EEECC
T ss_pred cccCCcceeeeCCEEEECCC--CCCCh
Confidence 1123489999999999 55553
No 286
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.89 E-value=4.7e-05 Score=69.68 Aligned_cols=34 Identities=24% Similarity=0.235 Sum_probs=31.5
Q ss_pred CCeEEEEccCCCHHHHHHHHhccCC--EEEEEEecC
Q 018550 197 DQVVILIGHYASGLDIKRDLAGFAK--EVHIASRSV 230 (354)
Q Consensus 197 ~~~v~ViG~G~~g~e~a~~l~~~g~--~v~~~~r~~ 230 (354)
..+|+|||+|++|+.+|..|++.|. +|+++.+.+
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~ 41 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRG 41 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCC
Confidence 4689999999999999999999998 999999875
No 287
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.87 E-value=1.6e-05 Score=71.17 Aligned_cols=84 Identities=18% Similarity=0.243 Sum_probs=63.8
Q ss_pred CCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCCcc--------------cc---------------------------
Q 018550 197 DQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVADE--------------TH--------------------------- 235 (354)
Q Consensus 197 ~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~--------------~~--------------------------- 235 (354)
..+|+|||+|++|+.+|..|++.|.+|+++++.+... .+
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~~ 90 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNKS 90 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETTEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCCce
Confidence 4689999999999999999999999999999865310 00
Q ss_pred ------------------------ccCCCCC-CeEEecceeEEecCCcEEEccCcEEecCEEEEcccCCC
Q 018550 236 ------------------------EKQPGYD-NMWLHSMVERANEDGTVVFRNGRVVSADVIMHCTGLTG 280 (354)
Q Consensus 236 ------------------------~~l~~~~-~~~~~~~v~~v~~~~~v~~~~g~~~~~D~vi~a~G~~~ 280 (354)
+.+.+.+ +++.++.|+++..++.|++.+|+++.+|+||.|+|..+
T Consensus 91 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~v~~~~g~~~~ad~vV~AdG~~s 160 (379)
T 3alj_A 91 VSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADPVGRLTLQTGEVLEADLIVGADGVGS 160 (379)
T ss_dssp EEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEETTTEEEETTSCEEECSEEEECCCTTC
T ss_pred eeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEeCCEEEECCCCEEEcCEEEECCCccH
Confidence 0001122 67777888888753357778888999999999999983
No 288
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.87 E-value=9.9e-06 Score=75.96 Aligned_cols=88 Identities=15% Similarity=0.109 Sum_probs=62.8
Q ss_pred CeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC---------------------------cc-----c-cccC------
Q 018550 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA---------------------------DE-----T-HEKQ------ 238 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~---------------------------~~-----~-~~~l------ 238 (354)
.+|+|||+|++|+.+|..|++.|.+|+++.+.+. +. . ....
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~ei 89 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQPEM 89 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHHHH
Confidence 5799999999999999999999999999998742 00 0 0000
Q ss_pred --------CC---CCCeEEecceeEEecCC-----cEEEccCcEEecCEEEEccc--CCCccCcc
Q 018550 239 --------PG---YDNMWLHSMVERANEDG-----TVVFRNGRVVSADVIMHCTG--LTGTSTTT 285 (354)
Q Consensus 239 --------~~---~~~~~~~~~v~~v~~~~-----~v~~~~g~~~~~D~vi~a~G--~~~~~p~~ 285 (354)
.+ ...+.+++.|+.+..+. .|++++|+++.+|.||+|+| ..|..|..
T Consensus 90 ~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~~p~i 154 (545)
T 3uox_A 90 LRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASRMPDI 154 (545)
T ss_dssp HHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC---CCC
T ss_pred HHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCcCCCC
Confidence 01 12577888898887322 27778888999999999999 55544443
No 289
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=97.86 E-value=1.9e-05 Score=71.38 Aligned_cols=83 Identities=20% Similarity=0.257 Sum_probs=63.4
Q ss_pred CCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC------------------------------------------c-
Q 018550 196 QDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA------------------------------------------D- 232 (354)
Q Consensus 196 ~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~------------------------------------------~- 232 (354)
+..+|+|||+|++|+-+|..|++.|.+|+++.+.+. .
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 101 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFRS 101 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEETTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEECCC
Confidence 446799999999999999999999999999998763 0
Q ss_pred c-cc-----------------------------ccCCCCCCeEEecceeEEecCCc---EEEccCcEEecCEEEEcccCC
Q 018550 233 E-TH-----------------------------EKQPGYDNMWLHSMVERANEDGT---VVFRNGRVVSADVIMHCTGLT 279 (354)
Q Consensus 233 ~-~~-----------------------------~~l~~~~~~~~~~~v~~v~~~~~---v~~~~g~~~~~D~vi~a~G~~ 279 (354)
. .. +.+.+ .+++.++.|+.+..++. |++.+|+++.+|+||.|.|..
T Consensus 102 g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~-~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV~AdG~~ 180 (407)
T 3rp8_A 102 GENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR-DSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLIAADGSH 180 (407)
T ss_dssp CCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG-GGEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCCTT
T ss_pred CCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc-CEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEEECCCcC
Confidence 0 00 00011 45778888888874432 667888999999999999987
No 290
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.84 E-value=5.7e-05 Score=75.68 Aligned_cols=95 Identities=17% Similarity=0.146 Sum_probs=70.0
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceeecCCCCCCCCCCCCCCCCcccccccccchhccccccccccC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWIYTSETESDPLGVDPNRYPVHSSLYKSLRVNLPRELMGFQA 82 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (354)
++|+|||+|+.|+.+|..|++.|.+|+|+|+.+.+.
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~-------------------------------------------- 320 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS-------------------------------------------- 320 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC--------------------------------------------
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc--------------------------------------------
Confidence 689999999999999999999999999999864220
Q ss_pred CCCCccCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCcceEEeceEEEEEEEe-CCCcEEEEEee--c---CCceEEEEeC
Q 018550 83 YPFVARNYEGSVDLRRYPGHEEVLRYLQNFAREFGVDQVVRLHTEVLNARLV-ESNKWKVKSRK--K---DDVVEEETFD 156 (354)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~-~~~~~~v~~~~--g---~~~~~~~~~d 156 (354)
.. .+.+++.|++ +++++.+.++..+ ++....+++.+ . .+...++.+|
T Consensus 321 --------------------~~-----~~~l~~~GV~--v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D 373 (965)
T 2gag_A 321 --------------------AA-----AAQAVADGVQ--VISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEAD 373 (965)
T ss_dssp --------------------HH-----HHHHHHTTCC--EEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECS
T ss_pred --------------------hh-----HHHHHhCCeE--EEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcC
Confidence 11 3345677999 9999999999874 31322455443 1 1113589999
Q ss_pred EEEEeeCCCCCccc
Q 018550 157 AVVVCNGHFSVPRL 170 (354)
Q Consensus 157 ~vIlAtG~~s~~~~ 170 (354)
.||+|+| ..|+.
T Consensus 374 ~Vv~a~G--~~P~~ 385 (965)
T 2gag_A 374 VLAVAGG--FNPVV 385 (965)
T ss_dssp EEEEECC--EEECC
T ss_pred EEEECCC--cCcCh
Confidence 9999999 55553
No 291
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=97.81 E-value=6.9e-06 Score=74.33 Aligned_cols=33 Identities=21% Similarity=0.266 Sum_probs=30.9
Q ss_pred CeEEEEccCCCHHHHHHHHhccCCEEEEEEecC
Q 018550 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~ 230 (354)
..|+|||+|++|+.+|..|++.|.+|+++.+.+
T Consensus 28 ~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~ 60 (417)
T 3v76_A 28 QDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHAR 60 (417)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 579999999999999999999999999999865
No 292
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.81 E-value=4.7e-05 Score=73.41 Aligned_cols=54 Identities=17% Similarity=0.114 Sum_probs=38.7
Q ss_pred HHHHHHHHHHhCCcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEeeCCCCCcc
Q 018550 106 LRYLQNFAREFGVDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCNGHFSVPR 169 (354)
Q Consensus 106 ~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlAtG~~s~~~ 169 (354)
..++.+.+++.|++ ++.++++.++.. +..++. .+| +..++.+|.||+|+| ..|+
T Consensus 576 ~~~~~~~l~~~GV~--v~~~~~v~~i~~---~~v~~~-~~G--~~~~i~~D~Vi~a~G--~~p~ 629 (671)
T 1ps9_A 576 GWIHRTTLLSRGVK--MIPGVSYQKIDD---DGLHVV-ING--ETQVLAVDNVVICAG--QEPN 629 (671)
T ss_dssp HHHHHHHHHHTTCE--EECSCEEEEEET---TEEEEE-ETT--EEEEECCSEEEECCC--EEEC
T ss_pred HHHHHHHHHhcCCE--EEeCcEEEEEeC---CeEEEe-cCC--eEEEEeCCEEEECCC--cccc
Confidence 34556677778998 999999999862 444443 333 235799999999999 5554
No 293
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.79 E-value=7.3e-05 Score=68.48 Aligned_cols=35 Identities=31% Similarity=0.401 Sum_probs=30.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHHc--------------------CC-cEEEEeeCCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLRE--------------------GH-TVVVYEKGEQ 36 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~--------------------g~-~v~lie~~~~ 36 (354)
.++|+|||+|..|+.+|..|++. +. +|+++++...
T Consensus 147 ~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~ 202 (456)
T 1lqt_A 147 GARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGP 202 (456)
T ss_dssp SSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCCh
Confidence 36899999999999999999974 54 8999998653
No 294
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=97.77 E-value=2.4e-05 Score=67.01 Aligned_cols=83 Identities=19% Similarity=0.259 Sum_probs=60.6
Q ss_pred CeEEEEccCCCHHHHHHHHhcc-CCEEEEEEecCCc--------------------------------------------
Q 018550 198 QVVILIGHYASGLDIKRDLAGF-AKEVHIASRSVAD-------------------------------------------- 232 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~~-g~~v~~~~r~~~~-------------------------------------------- 232 (354)
..|+|||+|++|+.+|..|++. |.+|+++.+.+..
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 119 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAA 119 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCHH
T ss_pred cCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCHH
Confidence 4699999999999999999997 9999999987521
Q ss_pred ----cccccCCC-CC-CeEEecceeEEec-CCc---EEEc---------cC-----cEEecCEEEEcccCCC
Q 018550 233 ----ETHEKQPG-YD-NMWLHSMVERANE-DGT---VVFR---------NG-----RVVSADVIMHCTGLTG 280 (354)
Q Consensus 233 ----~~~~~l~~-~~-~~~~~~~v~~v~~-~~~---v~~~---------~g-----~~~~~D~vi~a~G~~~ 280 (354)
.+.+++.+ .+ +++.++.|+++.. ++. |.+. ++ .++.+|.||.|+|..+
T Consensus 120 ~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s 191 (284)
T 1rp0_A 120 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDG 191 (284)
T ss_dssp HHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSS
T ss_pred HHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCch
Confidence 01111222 34 7888899999873 332 3442 22 5789999999999763
No 295
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.76 E-value=5.6e-05 Score=69.18 Aligned_cols=33 Identities=24% Similarity=0.493 Sum_probs=30.3
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCC-cEEEEeeCC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGH-TVVVYEKGE 35 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~-~v~lie~~~ 35 (354)
++|+|||||..|+.+|..+.+.|. +|+++++.+
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~ 298 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRD 298 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCC
Confidence 689999999999999999999998 599998864
No 296
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.76 E-value=0.00017 Score=66.10 Aligned_cols=33 Identities=24% Similarity=0.343 Sum_probs=29.8
Q ss_pred CeEEEEcCChHHHHHHHHHH--------------------HcCC-cEEEEeeCC
Q 018550 3 RHVAVIGAGAAGLVVGHELL--------------------REGH-TVVVYEKGE 35 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~--------------------~~g~-~v~lie~~~ 35 (354)
++|+|||+|..|+.+|..|+ +.+. +|+|+++..
T Consensus 146 ~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~ 199 (460)
T 1cjc_A 146 DTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRG 199 (460)
T ss_dssp SEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSC
T ss_pred CEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCC
Confidence 68999999999999999999 5687 799999865
No 297
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=97.76 E-value=2.6e-05 Score=68.30 Aligned_cols=33 Identities=24% Similarity=0.389 Sum_probs=30.7
Q ss_pred CeEEEEccCCCHHHHHHHHhccCCEEEEEEecC
Q 018550 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~ 230 (354)
..|+|||+|++|+-+|..|++.|.+|+++++.+
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCC
Confidence 469999999999999999999999999999874
No 298
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.75 E-value=0.00013 Score=67.12 Aligned_cols=34 Identities=12% Similarity=0.173 Sum_probs=31.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
.++|+|||+|.+|+.+|..|++.|.+|+++++.+
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~ 230 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRT 230 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSS
T ss_pred CCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECC
Confidence 4789999999999999999999999999999864
No 299
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=97.74 E-value=2.2e-05 Score=72.83 Aligned_cols=85 Identities=12% Similarity=0.109 Sum_probs=63.6
Q ss_pred CCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCCc-------------------------------------------
Q 018550 196 QDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVAD------------------------------------------- 232 (354)
Q Consensus 196 ~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~~------------------------------------------- 232 (354)
...+|+|||||++|+.+|..|++.|.+|+++.+.+..
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~ 170 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQL 170 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHH
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHH
Confidence 4578999999999999999999999999999987530
Q ss_pred cccccCCCCC-CeEEecceeEEecC---Cc---EEE--c-cC--cEEecCEEEEcccCCC
Q 018550 233 ETHEKQPGYD-NMWLHSMVERANED---GT---VVF--R-NG--RVVSADVIMHCTGLTG 280 (354)
Q Consensus 233 ~~~~~l~~~~-~~~~~~~v~~v~~~---~~---v~~--~-~g--~~~~~D~vi~a~G~~~ 280 (354)
.+.+.+.+.+ +++.++.|+++..+ +. |++ . +| .++.+|+||.|+|..+
T Consensus 171 ~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S 230 (497)
T 2bry_A 171 LLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKF 230 (497)
T ss_dssp HHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTC
T ss_pred HHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCc
Confidence 0001112233 78899999999753 21 555 3 55 4689999999999984
No 300
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=97.73 E-value=6.3e-05 Score=67.66 Aligned_cols=83 Identities=18% Similarity=0.224 Sum_probs=62.4
Q ss_pred CCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCCc---------------cccccC-----------------C-----
Q 018550 197 DQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVAD---------------ETHEKQ-----------------P----- 239 (354)
Q Consensus 197 ~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~~---------------~~~~~l-----------------~----- 239 (354)
..+|+|||+|++|+-+|..|++.|.+|+++++.+.. +.++++ .
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~ 84 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVDALTGE 84 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEETTTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEecCCCC
Confidence 367999999999999999999999999999986530 000000 0
Q ss_pred -------------------------CCCCeEEecceeEEecCCc---EEEccCcEEecCEEEEcccCC
Q 018550 240 -------------------------GYDNMWLHSMVERANEDGT---VVFRNGRVVSADVIMHCTGLT 279 (354)
Q Consensus 240 -------------------------~~~~~~~~~~v~~v~~~~~---v~~~~g~~~~~D~vi~a~G~~ 279 (354)
...+++.++.|+++..++. |++.+|+++.+|+||.|.|..
T Consensus 85 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~ 152 (397)
T 2vou_A 85 RVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGA 152 (397)
T ss_dssp EEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTT
T ss_pred ccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcc
Confidence 0125667778888874432 667788899999999999987
No 301
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=97.73 E-value=2.3e-05 Score=73.20 Aligned_cols=83 Identities=18% Similarity=0.218 Sum_probs=64.1
Q ss_pred CCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCCc--------------------------------------------
Q 018550 197 DQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVAD-------------------------------------------- 232 (354)
Q Consensus 197 ~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~~-------------------------------------------- 232 (354)
...|+|||+|++|+.+|..|++.|.+|+++.+.+..
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~~ 186 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP 186 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEeccc
Confidence 467999999999999999999999999999986310
Q ss_pred --------------------------------------cccccCCCC-CCeEEecceeEEecC-Cc---EEEccCcEEec
Q 018550 233 --------------------------------------ETHEKQPGY-DNMWLHSMVERANED-GT---VVFRNGRVVSA 269 (354)
Q Consensus 233 --------------------------------------~~~~~l~~~-~~~~~~~~v~~v~~~-~~---v~~~~g~~~~~ 269 (354)
.+.+.+++. .+++.++.|+++..+ +. |++.+|+++.+
T Consensus 187 ~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~i~A 266 (549)
T 3nlc_A 187 NFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKS 266 (549)
T ss_dssp TCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCEEEC
T ss_pred cccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCEEEC
Confidence 000001122 378889999998743 32 67788889999
Q ss_pred CEEEEcccCC
Q 018550 270 DVIMHCTGLT 279 (354)
Q Consensus 270 D~vi~a~G~~ 279 (354)
|.||+|+|..
T Consensus 267 d~VVlA~G~~ 276 (549)
T 3nlc_A 267 RHVVLAVGHS 276 (549)
T ss_dssp SCEEECCCTT
T ss_pred CEEEECCCCC
Confidence 9999999998
No 302
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.72 E-value=4e-05 Score=69.09 Aligned_cols=33 Identities=24% Similarity=0.212 Sum_probs=30.7
Q ss_pred CeEEEEccCCCHHHHHHHHhccCCEEEEEEecC
Q 018550 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~ 230 (354)
-+|+|||+|++|+-+|..|++.|.+|+++++++
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~ 34 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNS 34 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 379999999999999999999999999999865
No 303
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=97.71 E-value=3.4e-05 Score=69.41 Aligned_cols=82 Identities=21% Similarity=0.297 Sum_probs=61.9
Q ss_pred CeEEEEccCCCHHHHHHHHhccCCEEEEEEecCCc------------------------------------------c--
Q 018550 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSVAD------------------------------------------E-- 233 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~~------------------------------------------~-- 233 (354)
.+|+|||+|++|+-+|..|++.|.+|+++++.+.. .
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g~~ 86 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGEL 86 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETTEE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCCCE
Confidence 46999999999999999999999999999986420 0
Q ss_pred c--------------------------cccCCCC-C-CeEEecceeEEecCC-----cEEEccCcEEecCEEEEcccCC
Q 018550 234 T--------------------------HEKQPGY-D-NMWLHSMVERANEDG-----TVVFRNGRVVSADVIMHCTGLT 279 (354)
Q Consensus 234 ~--------------------------~~~l~~~-~-~~~~~~~v~~v~~~~-----~v~~~~g~~~~~D~vi~a~G~~ 279 (354)
. .+.+.+. + +++.++.|+++..++ .|++.+|+++.+|+||.|+|..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG~~ 165 (399)
T 2x3n_A 87 LRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGIA 165 (399)
T ss_dssp EEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCCTT
T ss_pred EEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCCCC
Confidence 0 0001222 3 677888888887432 3556788889999999999987
No 304
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=97.62 E-value=6.5e-05 Score=70.51 Aligned_cols=81 Identities=22% Similarity=0.280 Sum_probs=60.3
Q ss_pred CeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC----------cc--------cc---------------ccC------
Q 018550 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA----------DE--------TH---------------EKQ------ 238 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~----------~~--------~~---------------~~l------ 238 (354)
.+|+|||+|++|+.+|..|++.|.+|+++.+.+. +. .+ ...
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~~i 96 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQPEI 96 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHHHH
Confidence 4699999999999999999999999999998642 00 00 000
Q ss_pred --------CCC---CCeEEecceeEEecCC---c--EEEccCcEEecCEEEEcccC
Q 018550 239 --------PGY---DNMWLHSMVERANEDG---T--VVFRNGRVVSADVIMHCTGL 278 (354)
Q Consensus 239 --------~~~---~~~~~~~~v~~v~~~~---~--v~~~~g~~~~~D~vi~a~G~ 278 (354)
.+. ..+++++.|.++..++ . |++++|+++.+|.||+|+|.
T Consensus 97 ~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~ 152 (542)
T 1w4x_A 97 LRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQ 152 (542)
T ss_dssp HHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCS
T ss_pred HHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCC
Confidence 011 2577788898887322 2 67778888999999999995
No 305
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.60 E-value=0.00038 Score=70.20 Aligned_cols=33 Identities=27% Similarity=0.346 Sum_probs=30.4
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCC-cEEEEeeCC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGH-TVVVYEKGE 35 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~-~v~lie~~~ 35 (354)
++|+|||||..|+.+|..|.+.|. +|+++++.+
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 589999999999999999999997 899999864
No 306
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.59 E-value=0.00019 Score=64.59 Aligned_cols=84 Identities=19% Similarity=0.234 Sum_probs=63.2
Q ss_pred CCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCCc--------------c---cccc----------------------
Q 018550 197 DQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVAD--------------E---THEK---------------------- 237 (354)
Q Consensus 197 ~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~~--------------~---~~~~---------------------- 237 (354)
..+|+|||+|++|+-+|..|++.|.+|+++++.+.. . .+++
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 105 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNIADEK 105 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEEECCC
Confidence 468999999999999999999999999999986520 0 0000
Q ss_pred ------C-------------------------CCCCCeEEecceeEEecCCc---EEEccCcEEecCEEEEcccCCC
Q 018550 238 ------Q-------------------------PGYDNMWLHSMVERANEDGT---VVFRNGRVVSADVIMHCTGLTG 280 (354)
Q Consensus 238 ------l-------------------------~~~~~~~~~~~v~~v~~~~~---v~~~~g~~~~~D~vi~a~G~~~ 280 (354)
. .....++.++.|+++..++. |++.+|+++.+|+||.|.|...
T Consensus 106 g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S 182 (398)
T 2xdo_A 106 GNILSTKNVKPENRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGGMS 182 (398)
T ss_dssp SEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECSCTTC
T ss_pred CCchhhccccccCCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECCCcch
Confidence 0 00135778888988875432 6677888899999999999873
No 307
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=97.56 E-value=2.8e-05 Score=70.50 Aligned_cols=33 Identities=18% Similarity=0.136 Sum_probs=30.8
Q ss_pred CeEEEEccCCCHHHHHHHHhccCCEEEEEEecC
Q 018550 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~ 230 (354)
..|+|||+|++|+-+|..|++.|.+|+++++.+
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 469999999999999999999999999999875
No 308
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.55 E-value=3.4e-05 Score=73.82 Aligned_cols=35 Identities=31% Similarity=0.471 Sum_probs=33.3
Q ss_pred CeEEEEcCChHHHHHHHHHHHcC--------CcEEEEeeCC-Cc
Q 018550 3 RHVAVIGAGAAGLVVGHELLREG--------HTVVVYEKGE-QV 37 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g--------~~v~lie~~~-~~ 37 (354)
++|+|||||++|+++|+.|.+.| ++|+|+|+++ .+
T Consensus 57 ~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 57 YRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 68999999999999999999998 9999999998 88
No 309
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=97.44 E-value=8.7e-05 Score=65.28 Aligned_cols=33 Identities=12% Similarity=0.023 Sum_probs=30.0
Q ss_pred CeEEEEccCCCHHHHHHHHhc---cCCEEEEEEecC
Q 018550 198 QVVILIGHYASGLDIKRDLAG---FAKEVHIASRSV 230 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~---~g~~v~~~~r~~ 230 (354)
.+|+|||+|.+|+-+|..|++ .|.+|+++++++
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~ 37 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKAD 37 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCC
Confidence 369999999999999999999 899999998764
No 310
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.42 E-value=0.00011 Score=68.91 Aligned_cols=35 Identities=26% Similarity=0.552 Sum_probs=32.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQ 36 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~ 36 (354)
.+|++|||+|++|+.+|..|++.|.+|+|+|++..
T Consensus 7 ~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 7 PYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGP 41 (546)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred ceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 47999999999999999999999999999999753
No 311
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=97.35 E-value=0.0001 Score=67.43 Aligned_cols=33 Identities=27% Similarity=0.188 Sum_probs=30.5
Q ss_pred CeEEEEccCCCHHHHHHHHhccCCEEEEEEecC
Q 018550 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~ 230 (354)
..|+|||+|++|+-+|..|++.|.+|+++.+.+
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~ 59 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGN 59 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 469999999999999999999999999999865
No 312
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.33 E-value=0.00011 Score=68.61 Aligned_cols=35 Identities=26% Similarity=0.504 Sum_probs=31.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHH-cCCcEEEEeeCCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLR-EGHTVVVYEKGEQ 36 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~-~g~~v~lie~~~~ 36 (354)
.+|+||||+|++|+.+|..|++ .+++|+|+|+++.
T Consensus 17 ~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 17 NCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 4799999999999999999998 6789999999754
No 313
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=97.32 E-value=0.00017 Score=68.25 Aligned_cols=34 Identities=26% Similarity=0.273 Sum_probs=31.7
Q ss_pred CCeEEEEccCCCHHHHHHHHhccCCEEEEEEecC
Q 018550 197 DQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (354)
Q Consensus 197 ~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~ 230 (354)
...|+|||||++|+-+|..|++.|.+|+++.+.+
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~ 56 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSA 56 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCC
Confidence 4689999999999999999999999999999874
No 314
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=97.30 E-value=0.00012 Score=65.95 Aligned_cols=33 Identities=30% Similarity=0.322 Sum_probs=30.5
Q ss_pred CeEEEEccCCCHHHHHHHHhccCCEEEEEEecC
Q 018550 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~ 230 (354)
..|+|||+|++|+.+|..+++.|.+|+++.+.+
T Consensus 5 ~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~ 37 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGK 37 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 359999999999999999999999999999865
No 315
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.27 E-value=0.00014 Score=65.30 Aligned_cols=33 Identities=27% Similarity=0.230 Sum_probs=30.4
Q ss_pred CeEEEEccCCCHHHHHHHHhccCCEEEEEEecC
Q 018550 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~ 230 (354)
.+|+|||+|++|+-+|..|++.|.+|+++++.+
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 35 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQT 35 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 359999999999999999999999999999865
No 316
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.24 E-value=0.00027 Score=66.76 Aligned_cols=42 Identities=26% Similarity=0.437 Sum_probs=39.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCccceee
Q 018550 1 MFRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVGGSWI 42 (354)
Q Consensus 1 ~~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~gg~~~ 42 (354)
|++||+|||+|..|..+|..|++.|.+|.++|+++..||.|.
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~ 48 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWA 48 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGC
T ss_pred CcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCccc
Confidence 368999999999999999999999999999999999998754
No 317
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.23 E-value=0.00035 Score=67.39 Aligned_cols=33 Identities=12% Similarity=0.046 Sum_probs=30.9
Q ss_pred CCeEEEEccCCCHHHHHHHHhccCCEEEEEEec
Q 018550 197 DQVVILIGHYASGLDIKRDLAGFAKEVHIASRS 229 (354)
Q Consensus 197 ~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~ 229 (354)
...|+|||+|.+|+-+|..|++.|.+|+++.+.
T Consensus 272 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~ 304 (676)
T 3ps9_A 272 KREAAIIGGGIASALLSLALLRRGWQVTLYCAD 304 (676)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 368999999999999999999999999999985
No 318
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=97.20 E-value=0.00021 Score=63.24 Aligned_cols=33 Identities=36% Similarity=0.369 Sum_probs=30.8
Q ss_pred CeEEEEccCCCHHHHHHHHhccCCEEEEEEecC
Q 018550 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~ 230 (354)
..|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~ 37 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAGGHEVLVAEAAE 37 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 469999999999999999999999999999874
No 319
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.20 E-value=0.00019 Score=67.49 Aligned_cols=35 Identities=29% Similarity=0.411 Sum_probs=32.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcC-CcEEEEeeCCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREG-HTVVVYEKGEQ 36 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g-~~v~lie~~~~ 36 (354)
.+|+||||||.||+.+|..|++.+ .+|+|+|+++.
T Consensus 6 ~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 6 HFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp EEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred cccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 479999999999999999999987 79999999765
No 320
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.20 E-value=0.00016 Score=67.69 Aligned_cols=34 Identities=24% Similarity=0.406 Sum_probs=31.7
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCc
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQV 37 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~ 37 (354)
+|++|||+|.||+.+|..|++ |.+|+|+|++...
T Consensus 27 yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 27 YDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCG
T ss_pred ccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCc
Confidence 689999999999999999999 9999999998654
No 321
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=97.18 E-value=0.00018 Score=67.01 Aligned_cols=33 Identities=21% Similarity=0.179 Sum_probs=31.0
Q ss_pred CeEEEEccCCCHHHHHHHHhccCCEEEEEEecC
Q 018550 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~ 230 (354)
..|+|||+|++|+-+|..|++.|.+|+++.+.+
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~ 40 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHRVLLLEREA 40 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEccCC
Confidence 469999999999999999999999999999876
No 322
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=97.17 E-value=0.00038 Score=65.78 Aligned_cols=32 Identities=19% Similarity=0.243 Sum_probs=30.1
Q ss_pred CeEEEEccCCCHHHHHHHHhccCCEEEEEEec
Q 018550 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRS 229 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~ 229 (354)
-.|+|||+|+.|+++|..+++.|.+|.++++.
T Consensus 29 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~ 60 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHN 60 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEECChHHHHHHHHHHHhCCCCEEEEeec
Confidence 46999999999999999999999999999976
No 323
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=97.16 E-value=0.00012 Score=65.54 Aligned_cols=33 Identities=15% Similarity=0.195 Sum_probs=30.8
Q ss_pred CeEEEEccCCCHHHHHHHHhccCCEEEEEEecC
Q 018550 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~ 230 (354)
..|+|||+|++|+-+|..|++.|.+|+++.+.+
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~ 37 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRP 37 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 369999999999999999999999999999976
No 324
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.16 E-value=0.00045 Score=65.07 Aligned_cols=32 Identities=16% Similarity=0.178 Sum_probs=30.0
Q ss_pred CeEEEEccCCCHHHHHHHHhccCCEEEEEEec
Q 018550 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRS 229 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~ 229 (354)
-.|+|||+|+.|+++|..+++.|.+|.++++.
T Consensus 28 yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~ 59 (637)
T 2zxi_A 28 FDVVVIGGGHAGIEAALAAARMGAKTAMFVLN 59 (637)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEEec
Confidence 46999999999999999999999999999986
No 325
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.14 E-value=0.00038 Score=64.61 Aligned_cols=37 Identities=24% Similarity=0.336 Sum_probs=33.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCcc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQVG 38 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~g 38 (354)
.++++|||+|++|+.+|..|++.|.+|+|+|++...+
T Consensus 5 ~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 5 YVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 4789999999999999999999999999999976443
No 326
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.08 E-value=0.00023 Score=65.88 Aligned_cols=84 Identities=17% Similarity=0.221 Sum_probs=58.1
Q ss_pred CeEEEEccCCCHHHHHHHHhccCCEEEEEEecCCc-----------------------cccccCCCCC-CeEEecceeEE
Q 018550 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSVAD-----------------------ETHEKQPGYD-NMWLHSMVERA 253 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~~-----------------------~~~~~l~~~~-~~~~~~~v~~v 253 (354)
.+|+|||+|+.|+.+|..|++. .+|+++.+.+.. ...+.+ ..+ +++.++.+..+
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~~~v~~~~~~~v~~i 186 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-NENTKIYLETSALGV 186 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-CTTEEEETTEEECCC
T ss_pred CCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-hcCCEEEcCCEEEEE
Confidence 4699999999999999999999 999999987630 001122 222 45566677666
Q ss_pred ecCCc-EEE---ccCc--EEecCEEEEcccCCCccC
Q 018550 254 NEDGT-VVF---RNGR--VVSADVIMHCTGLTGTST 283 (354)
Q Consensus 254 ~~~~~-v~~---~~g~--~~~~D~vi~a~G~~~~~p 283 (354)
..++. +.+ ++++ ++.+|.+++|||..+..|
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~~~ 222 (493)
T 1y56_A 187 FDKGEYFLVPVVRGDKLIEILAKRVVLATGAIDSTM 222 (493)
T ss_dssp EECSSSEEEEEEETTEEEEEEESCEEECCCEEECCC
T ss_pred EcCCcEEEEEEecCCeEEEEECCEEEECCCCCccCC
Confidence 54432 322 3443 688999999999884433
No 327
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=97.08 E-value=0.00045 Score=64.04 Aligned_cols=34 Identities=24% Similarity=0.274 Sum_probs=31.4
Q ss_pred CCeEEEEccCCCHHHHHHHHhccCCEEEEEEecC
Q 018550 197 DQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (354)
Q Consensus 197 ~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~ 230 (354)
...|+|||+|++|+-+|..|++.|.+|+++++.+
T Consensus 12 ~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~ 45 (499)
T 2qa2_A 12 DASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLP 45 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 3579999999999999999999999999999865
No 328
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=97.06 E-value=0.0002 Score=67.49 Aligned_cols=33 Identities=18% Similarity=0.221 Sum_probs=30.3
Q ss_pred CeEEEEccCCCHHHHHHHHhccCCEEEEEEecC
Q 018550 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~ 230 (354)
..|+|||+|++|+-+|..|++.|.+|+++++.+
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~ 82 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAGGVGALVLEKLV 82 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 469999999999999999999999999999865
No 329
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=97.05 E-value=0.00026 Score=64.84 Aligned_cols=33 Identities=15% Similarity=0.148 Sum_probs=30.5
Q ss_pred CeEEEEccCCCHHHHHHHHhccCCEEEEEEecC
Q 018550 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~ 230 (354)
..|+|||+|++|+-+|..|++.|.+|+++.+.+
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~ 39 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKP 39 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 359999999999999999999999999999865
No 330
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=97.03 E-value=0.00023 Score=63.34 Aligned_cols=33 Identities=18% Similarity=0.166 Sum_probs=30.0
Q ss_pred CCeEEEEccCCCHHHHHHHHhccCCEEEEEEecC
Q 018550 197 DQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (354)
Q Consensus 197 ~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~ 230 (354)
.+.|+|||+|.+|+-+|..|+ .|.+|+++.+.+
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~ 41 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS-AHGRVVVLEREA 41 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSS
T ss_pred cCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCC
Confidence 467999999999999999999 599999999874
No 331
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.01 E-value=0.00054 Score=63.65 Aligned_cols=35 Identities=29% Similarity=0.374 Sum_probs=32.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQ 36 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~ 36 (354)
.++++|||+|++|+.+|..|++.|.+|+++|++..
T Consensus 11 ~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 11 RVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRS 45 (507)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 47899999999999999999999999999999754
No 332
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=96.98 E-value=0.00041 Score=62.59 Aligned_cols=33 Identities=18% Similarity=0.154 Sum_probs=30.8
Q ss_pred CeEEEEccCCCHHHHHHHHhccCCE-EEEEEecC
Q 018550 198 QVVILIGHYASGLDIKRDLAGFAKE-VHIASRSV 230 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~~g~~-v~~~~r~~ 230 (354)
..|+|||+|++|+-+|..|++.|.+ |+++.+.+
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~ 38 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQAGIGKVTLLESSS 38 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 5799999999999999999999999 99999865
No 333
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=96.98 E-value=0.00056 Score=63.42 Aligned_cols=34 Identities=29% Similarity=0.386 Sum_probs=31.3
Q ss_pred CCeEEEEccCCCHHHHHHHHhccCCEEEEEEecC
Q 018550 197 DQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (354)
Q Consensus 197 ~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~ 230 (354)
...|+|||+|++|+-+|..|++.|.+|+++++.+
T Consensus 11 ~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~ 44 (500)
T 2qa1_A 11 DAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLV 44 (500)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 3569999999999999999999999999999865
No 334
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.95 E-value=0.0003 Score=65.99 Aligned_cols=36 Identities=36% Similarity=0.394 Sum_probs=32.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHH-cCCcEEEEeeCCCc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLR-EGHTVVVYEKGEQV 37 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~-~g~~v~lie~~~~~ 37 (354)
.+|++|||||.||+.+|..|++ .+.+|+|+|+++..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 5899999999999999999998 68999999997544
No 335
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=96.95 E-value=0.00029 Score=62.89 Aligned_cols=32 Identities=16% Similarity=0.218 Sum_probs=30.0
Q ss_pred eEEEEccCCCHHHHHHHHhccCCEEEEEEecC
Q 018550 199 VVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (354)
Q Consensus 199 ~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~ 230 (354)
.|+|||+|++|+-+|..|++.|.+|+++++++
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~~ 37 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRP 37 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 38999999999999999999999999999865
No 336
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=96.94 E-value=0.00081 Score=64.97 Aligned_cols=34 Identities=12% Similarity=-0.031 Sum_probs=31.2
Q ss_pred CCeEEEEccCCCHHHHHHHHhccCCEEEEEEecC
Q 018550 197 DQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (354)
Q Consensus 197 ~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~ 230 (354)
...|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 264 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~ 297 (689)
T 3pvc_A 264 CDDIAIIGGGIVSALTALALQRRGAVVTLYCADA 297 (689)
T ss_dssp CSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSS
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 3679999999999999999999999999999853
No 337
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.94 E-value=0.0011 Score=49.91 Aligned_cols=34 Identities=29% Similarity=0.531 Sum_probs=31.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
+.+|+|||+|..|..+|..|.+.|++|+++|+++
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 5689999999999999999999999999999864
No 338
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.89 E-value=0.00057 Score=64.08 Aligned_cols=36 Identities=28% Similarity=0.377 Sum_probs=32.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHHc-CCcEEEEeeCCCc
Q 018550 2 FRHVAVIGAGAAGLVVGHELLRE-GHTVVVYEKGEQV 37 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~-g~~v~lie~~~~~ 37 (354)
.+|++|||+|++|+.+|..|++. +.+|+++|++...
T Consensus 13 ~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 13 EFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 47999999999999999999998 8999999997543
No 339
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.84 E-value=0.00083 Score=63.50 Aligned_cols=35 Identities=31% Similarity=0.384 Sum_probs=32.2
Q ss_pred CeEEEEcCChHHHHHHHHHHH-cCCcEEEEeeCCCc
Q 018550 3 RHVAVIGAGAAGLVVGHELLR-EGHTVVVYEKGEQV 37 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~-~g~~v~lie~~~~~ 37 (354)
+|++|||+|++|+.+|..|++ .|.+|+++|++...
T Consensus 25 ~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 25 YDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 699999999999999999999 79999999997543
No 340
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=96.83 E-value=0.001 Score=61.73 Aligned_cols=34 Identities=21% Similarity=0.266 Sum_probs=30.4
Q ss_pred CeEEEEccCCCHHHHHHHHhcc-CCEEEEEEecCC
Q 018550 198 QVVILIGHYASGLDIKRDLAGF-AKEVHIASRSVA 231 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~~-g~~v~~~~r~~~ 231 (354)
-.|+|||+|.+|+-+|..|++. |.+|+++++++.
T Consensus 11 ~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~ 45 (513)
T 4gde_A 11 VDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNET 45 (513)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSS
T ss_pred CCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCC
Confidence 3599999999999999999875 899999998873
No 341
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=96.82 E-value=0.0011 Score=62.57 Aligned_cols=32 Identities=16% Similarity=0.133 Sum_probs=30.3
Q ss_pred CeEEEEccCCCHHHHHHHHhccCCEEEEEEec
Q 018550 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRS 229 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~ 229 (354)
-.|+|||+|..|+++|..+++.|.+|.++++.
T Consensus 22 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~ 53 (641)
T 3cp8_A 22 YDVIVVGAGHAGCEAALAVARGGLHCLLITSD 53 (641)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEECccHHHHHHHHHHHHCCCcEEEEEec
Confidence 57999999999999999999999999999986
No 342
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.80 E-value=0.0013 Score=47.65 Aligned_cols=35 Identities=26% Similarity=0.369 Sum_probs=31.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcC-CcEEEEeeCC
Q 018550 1 MFRHVAVIGAGAAGLVVGHELLREG-HTVVVYEKGE 35 (354)
Q Consensus 1 ~~~~vvIIG~G~aG~~~a~~l~~~g-~~v~lie~~~ 35 (354)
|+++|+|+|+|..|..++..|.+.| ++|+++++++
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 3578999999999999999999999 8999999853
No 343
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.80 E-value=0.0015 Score=49.12 Aligned_cols=34 Identities=32% Similarity=0.408 Sum_probs=31.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
+++|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3589999999999999999999999999999864
No 344
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=96.76 E-value=0.00067 Score=63.51 Aligned_cols=33 Identities=24% Similarity=0.216 Sum_probs=31.0
Q ss_pred CeEEEEccCCCHHHHHHHHhccCCEEEEEEecC
Q 018550 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~ 230 (354)
..|+|||+|++|+-+|..|++.|.+|+++.+.+
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~ 38 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLARQGVRVLVVERRP 38 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 579999999999999999999999999999875
No 345
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.76 E-value=0.0017 Score=49.80 Aligned_cols=34 Identities=29% Similarity=0.540 Sum_probs=31.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
.++|+|||+|..|..+|..|.+.|++|+++|+++
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3689999999999999999999999999999864
No 346
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.68 E-value=0.00072 Score=55.03 Aligned_cols=36 Identities=8% Similarity=0.182 Sum_probs=32.8
Q ss_pred CCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecC
Q 018550 195 FQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (354)
Q Consensus 195 ~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~ 230 (354)
..+++|+|||+|.+|...+..|.+.|.+|+++.+..
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~ 64 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTV 64 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSC
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 367999999999999999999999999999998754
No 347
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.62 E-value=0.0028 Score=48.39 Aligned_cols=33 Identities=21% Similarity=0.189 Sum_probs=31.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKG 34 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~ 34 (354)
+++|+|+|+|..|..++..|.+.|++|+++|++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 468999999999999999999999999999985
No 348
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.55 E-value=0.0029 Score=47.29 Aligned_cols=33 Identities=21% Similarity=0.485 Sum_probs=30.8
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
++|+|||+|..|..+|..|.+.|++|+++|+++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 689999999999999999999999999999853
No 349
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=96.52 E-value=0.0015 Score=61.64 Aligned_cols=33 Identities=12% Similarity=0.242 Sum_probs=30.5
Q ss_pred CeEEEEccCCCHHHHHHHHhccCCEEEEEEecC
Q 018550 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~ 230 (354)
-.|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 122 ~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~ 154 (566)
T 1qo8_A 122 TQVLVVGAGSAGFNASLAAKKAGANVILVDKAP 154 (566)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 369999999999999999999999999999865
No 350
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=96.47 E-value=0.0019 Score=60.54 Aligned_cols=33 Identities=18% Similarity=0.225 Sum_probs=30.7
Q ss_pred CeEEEEccCCCHHHHHHHHhccCCEEEEEEecC
Q 018550 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~ 230 (354)
..|+|||+|++|+-+|..|++.|.+|+++++.+
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~ 59 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAHRQVGHLVVEQTD 59 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 469999999999999999999999999999865
No 351
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=96.38 E-value=0.0033 Score=54.55 Aligned_cols=35 Identities=37% Similarity=0.571 Sum_probs=31.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 1 MFRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 1 ~~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
|+++|+|||+|..|.+.|..|++.|.+|+++++++
T Consensus 1 M~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 1 MSLNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp --CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 67899999999999999999999999999999853
No 352
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=96.35 E-value=0.0026 Score=55.39 Aligned_cols=33 Identities=18% Similarity=0.322 Sum_probs=30.3
Q ss_pred CeEEEEccCCCHHHHHHHHhcc--CCEEEEEEecC
Q 018550 198 QVVILIGHYASGLDIKRDLAGF--AKEVHIASRSV 230 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~~--g~~v~~~~r~~ 230 (354)
..|+|||+|+.|+-+|..|++. |.+|+++.+.+
T Consensus 80 ~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~ 114 (344)
T 3jsk_A 80 TDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGV 114 (344)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSS
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCC
Confidence 4699999999999999999997 99999999875
No 353
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.28 E-value=0.043 Score=50.73 Aligned_cols=34 Identities=18% Similarity=0.336 Sum_probs=29.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHHc--CCcEEEEeeCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLRE--GHTVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~--g~~v~lie~~~ 35 (354)
.|+|+|||+|.+|+.++..|++. +.+|+++-|.+
T Consensus 246 gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~ 281 (501)
T 4b63_A 246 PYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDS 281 (501)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSS
T ss_pred CcEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCC
Confidence 36899999999999999999876 67899998864
No 354
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=96.27 E-value=0.0041 Score=46.65 Aligned_cols=33 Identities=36% Similarity=0.481 Sum_probs=30.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKG 34 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~ 34 (354)
+++|+|+|+|..|..++..|.+.|++|+++|++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 357999999999999999999999999999985
No 355
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=96.18 E-value=0.0039 Score=53.90 Aligned_cols=35 Identities=37% Similarity=0.545 Sum_probs=30.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 1 MFRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 1 ~~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
|+++|+|||+|..|.+.|..|++.|.+|+++++++
T Consensus 1 M~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 1 MSLRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp ---CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 67899999999999999999999999999999853
No 356
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=96.17 E-value=0.0024 Score=53.64 Aligned_cols=32 Identities=25% Similarity=0.417 Sum_probs=30.1
Q ss_pred eEEEEccCCCHHHHHHHHhccCCEEEEEEecC
Q 018550 199 VVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (354)
Q Consensus 199 ~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~ 230 (354)
.|+|||+|++|+-+|..|++.|.+|+++.+++
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~ 35 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 49999999999999999999999999999865
No 357
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.09 E-value=0.0062 Score=48.00 Aligned_cols=33 Identities=27% Similarity=0.315 Sum_probs=30.8
Q ss_pred CeEEEEcCChHHHHHHHHHHHc-CCcEEEEeeCC
Q 018550 3 RHVAVIGAGAAGLVVGHELLRE-GHTVVVYEKGE 35 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~-g~~v~lie~~~ 35 (354)
.+|+|||+|..|..+|..|.+. |++|+++|+++
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 5799999999999999999999 99999999864
No 358
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=96.05 E-value=0.0047 Score=52.86 Aligned_cols=35 Identities=29% Similarity=0.365 Sum_probs=31.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 1 MFRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 1 ~~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
|+++|+|||+|..|.+.|..|++.|.+|+++++..
T Consensus 1 M~mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 1 MSLSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred CCcEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 67899999999999999999999999999999863
No 359
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=96.02 E-value=0.0053 Score=53.09 Aligned_cols=32 Identities=34% Similarity=0.329 Sum_probs=29.8
Q ss_pred eEEEEccCCCHHHHHHHHhcc--CCEEEEEEecC
Q 018550 199 VVILIGHYASGLDIKRDLAGF--AKEVHIASRSV 230 (354)
Q Consensus 199 ~v~ViG~G~~g~e~a~~l~~~--g~~v~~~~r~~ 230 (354)
.|+|||+|++|+-+|..|++. |.+|+++.+.+
T Consensus 67 dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~ 100 (326)
T 2gjc_A 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSV 100 (326)
T ss_dssp SEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSS
T ss_pred CEEEECccHHHHHHHHHHHhcCCCCeEEEEecCc
Confidence 699999999999999999998 99999999855
No 360
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=96.01 E-value=0.0062 Score=55.40 Aligned_cols=35 Identities=29% Similarity=0.391 Sum_probs=32.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 1 MFRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 1 ~~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
|+++|.|||+|..|+..|..|++.|++|+++|+++
T Consensus 1 M~mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 1 MSLDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 56799999999999999999999999999999864
No 361
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=95.85 E-value=0.0072 Score=49.17 Aligned_cols=33 Identities=21% Similarity=0.355 Sum_probs=30.8
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
++|+|||+|..|..+|..|.+.|++|+++|+++
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 479999999999999999999999999999864
No 362
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=95.70 E-value=0.012 Score=47.48 Aligned_cols=35 Identities=29% Similarity=0.551 Sum_probs=31.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQ 36 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~ 36 (354)
.++|.|||+|..|.+.|..|++.|++|+++++++.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 46899999999999999999999999999998653
No 363
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=95.67 E-value=0.01 Score=51.06 Aligned_cols=34 Identities=29% Similarity=0.429 Sum_probs=30.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 1 MFRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 1 ~~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
|+++|+|||+|..|.+.|..|+ .|.+|+++++.+
T Consensus 1 M~mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 1 MSLKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 6789999999999999999999 999999999853
No 364
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.66 E-value=0.011 Score=48.13 Aligned_cols=33 Identities=27% Similarity=0.337 Sum_probs=30.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKG 34 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~ 34 (354)
.++|+|||||..|...+..|.+.|.+|+++++.
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 478999999999999999999999999999874
No 365
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=95.65 E-value=0.012 Score=50.49 Aligned_cols=33 Identities=39% Similarity=0.638 Sum_probs=30.9
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
++|.|||+|..|...|..|++.|++|+++|+++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 679999999999999999999999999999863
No 366
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=95.64 E-value=0.011 Score=50.95 Aligned_cols=34 Identities=29% Similarity=0.425 Sum_probs=30.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
+++|.|||+|..|...|..|++.|++|+++++++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 4689999999999999999999999999999853
No 367
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=95.59 E-value=0.014 Score=51.55 Aligned_cols=35 Identities=20% Similarity=0.376 Sum_probs=32.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQ 36 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~ 36 (354)
+|+|+|||||..|..+++.+.+.|++++++|.++.
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 57899999999999999999999999999997643
No 368
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=95.58 E-value=0.013 Score=49.70 Aligned_cols=33 Identities=24% Similarity=0.467 Sum_probs=31.1
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
++|.|||+|..|...|..|++.|++|+++|+++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 689999999999999999999999999999864
No 369
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=95.56 E-value=0.015 Score=50.49 Aligned_cols=34 Identities=24% Similarity=0.380 Sum_probs=31.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCC-cEEEEeeCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGH-TVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~-~v~lie~~~ 35 (354)
+++|+|||+|..|..+|..|+..|+ +|+++|.++
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 4689999999999999999999998 999999864
No 370
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=95.53 E-value=0.013 Score=50.37 Aligned_cols=33 Identities=21% Similarity=0.354 Sum_probs=30.9
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
.+|+|||+|..|...|..++.+|++|+++|..+
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 579999999999999999999999999999754
No 371
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.52 E-value=0.0082 Score=54.54 Aligned_cols=35 Identities=29% Similarity=0.340 Sum_probs=32.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQ 36 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~ 36 (354)
.++|+|||.|.+|+++|+.|.++|++|+++|....
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~ 39 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMT 39 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSS
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCC
Confidence 47899999999999999999999999999998653
No 372
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.51 E-value=0.013 Score=53.40 Aligned_cols=34 Identities=24% Similarity=0.302 Sum_probs=31.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
.++|+|||.|.+|+++|..|.++|++|++.|+.+
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 3789999999999999999999999999999854
No 373
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=95.47 E-value=0.016 Score=49.91 Aligned_cols=35 Identities=29% Similarity=0.436 Sum_probs=31.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCC-cEEEEeeCC
Q 018550 1 MFRHVAVIGAGAAGLVVGHELLREGH-TVVVYEKGE 35 (354)
Q Consensus 1 ~~~~vvIIG~G~aG~~~a~~l~~~g~-~v~lie~~~ 35 (354)
|+++|+|||+|..|..+|..|+..|. ++.++|.++
T Consensus 1 M~~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 1 MRKKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 66899999999999999999999997 999999753
No 374
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=95.47 E-value=0.014 Score=50.85 Aligned_cols=34 Identities=29% Similarity=0.484 Sum_probs=31.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeC
Q 018550 1 MFRHVAVIGAGAAGLVVGHELLREGHTVVVYEKG 34 (354)
Q Consensus 1 ~~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~ 34 (354)
|..+|.|||+|..|.+.|..|++.|++|+++++.
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 5679999999999999999999999999999985
No 375
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=95.45 E-value=0.013 Score=49.30 Aligned_cols=33 Identities=21% Similarity=0.374 Sum_probs=31.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKG 34 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~ 34 (354)
.++|+|||||..|...+..|.+.|.+|+++++.
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 478999999999999999999999999999985
No 376
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=95.39 E-value=0.012 Score=50.40 Aligned_cols=35 Identities=29% Similarity=0.516 Sum_probs=29.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 1 MFRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 1 ~~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
|+++|.+||-|..|...|..|.+.|++|+++|+.+
T Consensus 4 Ms~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~ 38 (297)
T 4gbj_A 4 MSEKIAFLGLGNLGTPIAEILLEAGYELVVWNRTA 38 (297)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHTTCEEEEC----
T ss_pred CCCcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 67789999999999999999999999999999865
No 377
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=95.38 E-value=0.018 Score=49.01 Aligned_cols=34 Identities=29% Similarity=0.433 Sum_probs=31.1
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQ 36 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~ 36 (354)
++|.|||+|..|...|..|++.|++|+++++++.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 3799999999999999999999999999998653
No 378
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=95.36 E-value=0.014 Score=49.54 Aligned_cols=35 Identities=17% Similarity=0.285 Sum_probs=32.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 1 MFRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 1 ~~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
|+++|+|.|+|..|..++..|.+.|++|+++.+.+
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 56899999999999999999999999999999864
No 379
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=95.31 E-value=0.02 Score=47.47 Aligned_cols=34 Identities=26% Similarity=0.412 Sum_probs=31.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
.++|.|||+|..|.++|..|++.|++|+++++++
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 4789999999999999999999999999999864
No 380
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=95.31 E-value=0.018 Score=49.88 Aligned_cols=34 Identities=29% Similarity=0.439 Sum_probs=31.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCC--cEEEEeeCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGH--TVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~--~v~lie~~~ 35 (354)
+++|+|||+|..|..+|..|++.|+ +|+++|++.
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999999998 999999853
No 381
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=95.30 E-value=0.021 Score=50.72 Aligned_cols=34 Identities=29% Similarity=0.303 Sum_probs=31.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
..+|+|||+|.+|+.+|..|...|.+|+++|+.+
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3589999999999999999999999999999865
No 382
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=95.24 E-value=0.019 Score=49.27 Aligned_cols=34 Identities=24% Similarity=0.336 Sum_probs=31.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
+++|.|||.|..|...|..|++.|++|+++++++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4689999999999999999999999999999864
No 383
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=95.24 E-value=0.013 Score=50.15 Aligned_cols=35 Identities=20% Similarity=0.235 Sum_probs=32.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQ 36 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~ 36 (354)
+++|.|||.|..|...|..|++.|++|+++|+++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 45899999999999999999999999999998754
No 384
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=95.22 E-value=0.02 Score=49.79 Aligned_cols=33 Identities=30% Similarity=0.415 Sum_probs=30.7
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCC-cEEEEeeCC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGH-TVVVYEKGE 35 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~-~v~lie~~~ 35 (354)
++|+|||+|..|.++|..|+..|+ +|+|+|.++
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 589999999999999999999998 999999864
No 385
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=95.21 E-value=0.019 Score=49.55 Aligned_cols=33 Identities=21% Similarity=0.354 Sum_probs=31.1
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
++|.|||+|..|...|..|++.|++|+++|+++
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 689999999999999999999999999999864
No 386
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=95.20 E-value=0.017 Score=49.96 Aligned_cols=35 Identities=23% Similarity=0.302 Sum_probs=32.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcC-CcEEEEeeCC
Q 018550 1 MFRHVAVIGAGAAGLVVGHELLREG-HTVVVYEKGE 35 (354)
Q Consensus 1 ~~~~vvIIG~G~aG~~~a~~l~~~g-~~v~lie~~~ 35 (354)
|+++|.|||.|..|...|..|++.| ++|+++++++
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred cCCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 4578999999999999999999999 9999999864
No 387
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=95.20 E-value=0.02 Score=49.45 Aligned_cols=33 Identities=30% Similarity=0.505 Sum_probs=30.8
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCC-cEEEEeeCC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGH-TVVVYEKGE 35 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~-~v~lie~~~ 35 (354)
++|+|||+|..|..+|..|++.|+ +|+++|+++
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 689999999999999999999998 999999864
No 388
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=95.14 E-value=0.023 Score=47.10 Aligned_cols=35 Identities=14% Similarity=0.373 Sum_probs=32.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCC----cEEEEeeCC
Q 018550 1 MFRHVAVIGAGAAGLVVGHELLREGH----TVVVYEKGE 35 (354)
Q Consensus 1 ~~~~vvIIG~G~aG~~~a~~l~~~g~----~v~lie~~~ 35 (354)
|+++|.|||+|..|.+.|..|.+.|+ +|.++++++
T Consensus 1 M~~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 1 MDKQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 67899999999999999999999998 999999854
No 389
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=95.13 E-value=0.022 Score=49.66 Aligned_cols=32 Identities=31% Similarity=0.617 Sum_probs=30.4
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKG 34 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~ 34 (354)
++|+|||+|..|.+.|..|++.|++|+++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 68999999999999999999999999999974
No 390
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.09 E-value=0.017 Score=52.69 Aligned_cols=79 Identities=15% Similarity=0.116 Sum_probs=52.2
Q ss_pred CCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC--ccccccCCCCC-CeEEecceeEEecCCcEEEccCcE-Ee-c
Q 018550 195 FQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA--DETHEKQPGYD-NMWLHSMVERANEDGTVVFRNGRV-VS-A 269 (354)
Q Consensus 195 ~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~--~~~~~~l~~~~-~~~~~~~v~~v~~~~~v~~~~g~~-~~-~ 269 (354)
..+++|.|||.|.+|+-+|..|+++|.+|++..+.+. ....+.|++.+ +++.+.... .. -. +
T Consensus 7 ~~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~~-------------~~~~~~~ 73 (451)
T 3lk7_A 7 FENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPL-------------ELLDEDF 73 (451)
T ss_dssp TTTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCCCG-------------GGGGSCE
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCChH-------------HhhcCCC
Confidence 4679999999999999999999999999999987642 11222232222 222221100 01 12 8
Q ss_pred CEEEEcccCCCccCccc
Q 018550 270 DVIMHCTGLTGTSTTTL 286 (354)
Q Consensus 270 D~vi~a~G~~~~~p~~~ 286 (354)
|+||.+.|..++.|...
T Consensus 74 d~vv~spgi~~~~p~~~ 90 (451)
T 3lk7_A 74 CYMIKNPGIPYNNPMVK 90 (451)
T ss_dssp EEEEECTTSCTTSHHHH
T ss_pred CEEEECCcCCCCChhHH
Confidence 99999999986555433
No 391
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=95.08 E-value=0.023 Score=48.96 Aligned_cols=34 Identities=26% Similarity=0.516 Sum_probs=31.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
+++|.|||.|..|...|..|++.|++|+++++++
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999999864
No 392
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=95.08 E-value=0.022 Score=52.01 Aligned_cols=35 Identities=14% Similarity=0.381 Sum_probs=32.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHHc-CC-cEEEEeeCCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLRE-GH-TVVVYEKGEQ 36 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~-g~-~v~lie~~~~ 36 (354)
.++|.|||+|..|+..|..|++. |+ +|+++|+++.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 36899999999999999999999 99 9999998764
No 393
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=95.07 E-value=0.021 Score=50.29 Aligned_cols=34 Identities=26% Similarity=0.283 Sum_probs=31.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
..+|+|||+|.+|..+|..|...|.+|+++|+.+
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3689999999999999999999999999999864
No 394
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=95.06 E-value=0.021 Score=52.28 Aligned_cols=34 Identities=32% Similarity=0.561 Sum_probs=31.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
.++|.|||+|..|+..|..|++.|++|+++|+++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4789999999999999999999999999999854
No 395
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=95.06 E-value=0.021 Score=50.18 Aligned_cols=34 Identities=26% Similarity=0.452 Sum_probs=31.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
+++|.|||+|..|.+.|..|++.|++|+++++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3689999999999999999999999999999864
No 396
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=95.04 E-value=0.023 Score=48.36 Aligned_cols=33 Identities=33% Similarity=0.425 Sum_probs=30.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
.++|.|||+|..|...|..|+ .|++|+++|+.+
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 478999999999999999999 999999999864
No 397
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.97 E-value=0.018 Score=50.07 Aligned_cols=76 Identities=9% Similarity=-0.041 Sum_probs=50.8
Q ss_pred CCeEEEEccCCCHHH-HHHHHhccCCEEEEEEecCCccccccCCCCC-CeEEecceeEEecCCcEEEccCcEE---ecCE
Q 018550 197 DQVVILIGHYASGLD-IKRDLAGFAKEVHIASRSVADETHEKQPGYD-NMWLHSMVERANEDGTVVFRNGRVV---SADV 271 (354)
Q Consensus 197 ~~~v~ViG~G~~g~e-~a~~l~~~g~~v~~~~r~~~~~~~~~l~~~~-~~~~~~~v~~v~~~~~v~~~~g~~~---~~D~ 271 (354)
.++|.|||.|.+|+- +|..|.++|.+|++..+.......++|++.+ .++.... ...+ .+|+
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~~--------------~~~l~~~~~d~ 69 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGFD--------------AAQLDEFKADV 69 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEEESCC--------------GGGGGSCCCSE
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEECCCC--------------HHHcCCCCCCE
Confidence 478999999999996 8899999999999998765322223333222 2221110 0112 4899
Q ss_pred EEEcccCCCccCccc
Q 018550 272 IMHCTGLTGTSTTTL 286 (354)
Q Consensus 272 vi~a~G~~~~~p~~~ 286 (354)
||.+.|..++.|...
T Consensus 70 vV~Spgi~~~~p~~~ 84 (326)
T 3eag_A 70 YVIGNVAKRGMDVVE 84 (326)
T ss_dssp EEECTTCCTTCHHHH
T ss_pred EEECCCcCCCCHHHH
Confidence 999999996555443
No 398
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=94.95 E-value=0.021 Score=48.79 Aligned_cols=35 Identities=31% Similarity=0.518 Sum_probs=30.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 1 MFRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 1 ~~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
|+++|.|||+|..|...|..|.+.|++|.++++++
T Consensus 4 M~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 4 MTMKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ccceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 45689999999999999999999999999999853
No 399
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=94.93 E-value=0.02 Score=50.82 Aligned_cols=36 Identities=11% Similarity=0.189 Sum_probs=32.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcC-------CcEEEEeeCCC
Q 018550 1 MFRHVAVIGAGAAGLVVGHELLREG-------HTVVVYEKGEQ 36 (354)
Q Consensus 1 ~~~~vvIIG~G~aG~~~a~~l~~~g-------~~v~lie~~~~ 36 (354)
|+++|.|||+|..|.+.|..|++.| ++|+++++++.
T Consensus 20 ~~~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 20 GPLKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp SCBCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 3468999999999999999999999 99999998654
No 400
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.89 E-value=0.024 Score=43.17 Aligned_cols=38 Identities=11% Similarity=0.130 Sum_probs=32.7
Q ss_pred CCCCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecC
Q 018550 193 NPFQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (354)
Q Consensus 193 ~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~ 230 (354)
....+++++|+|+|.+|..++..|.+.|.+|+++.+++
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 33456899999999999999999999999999998865
No 401
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=94.89 E-value=0.026 Score=47.94 Aligned_cols=34 Identities=21% Similarity=0.512 Sum_probs=31.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
.++|.|||.|..|...|..|++.|++|+++++++
T Consensus 1 s~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 1 SQKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 3689999999999999999999999999999864
No 402
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=94.88 E-value=0.031 Score=45.27 Aligned_cols=33 Identities=24% Similarity=0.420 Sum_probs=30.6
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
++|.|||+|..|...|..|.+.|++|.+++++.
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 579999999999999999999999999999853
No 403
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=94.83 E-value=0.015 Score=52.69 Aligned_cols=33 Identities=15% Similarity=0.202 Sum_probs=31.4
Q ss_pred CeEEEEccCCCHHHHHHHHhccCCEEEEEEecC
Q 018550 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~ 230 (354)
++|+|||+|++|+-+|..|++.|.+|+++.+.+
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 679999999999999999999999999999876
No 404
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=94.79 E-value=0.011 Score=44.43 Aligned_cols=34 Identities=12% Similarity=0.086 Sum_probs=30.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
.++|+|||+|..|...+..|.+.|.+|+++++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 4689999999999999999999999999999853
No 405
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=94.78 E-value=0.014 Score=47.45 Aligned_cols=33 Identities=24% Similarity=0.464 Sum_probs=30.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEE-EeeC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVV-YEKG 34 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~l-ie~~ 34 (354)
+++|.|||+|..|.+.|..|.+.|++|++ ++++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~ 56 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRG 56 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCC
Confidence 46899999999999999999999999998 7765
No 406
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=94.76 E-value=0.034 Score=47.24 Aligned_cols=34 Identities=24% Similarity=0.411 Sum_probs=31.2
Q ss_pred CCeEEEEcC-ChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 2 FRHVAVIGA-GAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~-G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
+++|.|||+ |..|...|..|.+.|++|+++++++
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 468999999 9999999999999999999999853
No 407
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=94.71 E-value=0.023 Score=48.29 Aligned_cols=33 Identities=24% Similarity=0.469 Sum_probs=31.0
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
++|.|||.|..|...|..|++.|++|+++++++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 579999999999999999999999999999864
No 408
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=94.70 E-value=0.029 Score=48.11 Aligned_cols=34 Identities=26% Similarity=0.518 Sum_probs=31.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
+++|.|||+|..|...|..|.+.|++|+++++++
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 4789999999999999999999999999999864
No 409
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=94.69 E-value=0.032 Score=49.03 Aligned_cols=33 Identities=24% Similarity=0.458 Sum_probs=30.7
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
++|.|||+|..|...|..|++.|++|+++++.+
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 689999999999999999999999999999853
No 410
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=94.67 E-value=0.034 Score=48.10 Aligned_cols=32 Identities=41% Similarity=0.579 Sum_probs=29.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKG 34 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~ 34 (354)
+++|+|||+|..|.+.|..|++.|++|+++ ++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 578999999999999999999999999999 64
No 411
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=94.66 E-value=0.034 Score=50.35 Aligned_cols=33 Identities=24% Similarity=0.339 Sum_probs=31.3
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
++|.|||+|..|...|..|++.|++|+++|+++
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 87 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNE 87 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcH
Confidence 689999999999999999999999999999865
No 412
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.65 E-value=0.037 Score=48.04 Aligned_cols=34 Identities=18% Similarity=0.272 Sum_probs=30.8
Q ss_pred CCeEEEEcCChHHHH-HHHHHHHcCCcEEEEeeCC
Q 018550 2 FRHVAVIGAGAAGLV-VGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~-~a~~l~~~g~~v~lie~~~ 35 (354)
+++|.|||.|.+|++ +|..|.++|++|++.|+.+
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 478999999999996 7889999999999999864
No 413
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=94.61 E-value=0.018 Score=50.95 Aligned_cols=33 Identities=15% Similarity=0.148 Sum_probs=30.7
Q ss_pred CeEEEEccCCCHHHHHHHHhccCCEEEEEEecC
Q 018550 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~ 230 (354)
+.|+|||+|..|+++|..+++.|.+|.++.+++
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 469999999999999999999999999999865
No 414
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=94.61 E-value=0.034 Score=46.22 Aligned_cols=32 Identities=19% Similarity=0.367 Sum_probs=30.1
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCC-cEEEEeeC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGH-TVVVYEKG 34 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~-~v~lie~~ 34 (354)
++|+|||+|-.|..+|..|++.|. +++++|++
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d 64 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFD 64 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCC
Confidence 689999999999999999999998 89999985
No 415
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=94.60 E-value=0.035 Score=51.10 Aligned_cols=35 Identities=23% Similarity=0.328 Sum_probs=32.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 1 MFRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 1 ~~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
|..+|.|||.|..|..+|..|+++|++|+++++.+
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 56789999999999999999999999999999864
No 416
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=94.59 E-value=0.038 Score=47.61 Aligned_cols=34 Identities=24% Similarity=0.451 Sum_probs=31.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCC--cEEEEeeCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGH--TVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~--~v~lie~~~ 35 (354)
.++|.|||.|..|.+.|..|.+.|+ +|+++|+++
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 3689999999999999999999999 999999864
No 417
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=94.59 E-value=0.036 Score=48.71 Aligned_cols=33 Identities=36% Similarity=0.486 Sum_probs=30.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCC-cEEEEeeC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGH-TVVVYEKG 34 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~-~v~lie~~ 34 (354)
..+|||+|+|.+|+.+|..|...|. +|+++|+.
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKF 221 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence 3589999999999999999999999 99999985
No 418
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=94.58 E-value=0.034 Score=47.57 Aligned_cols=34 Identities=15% Similarity=0.412 Sum_probs=31.1
Q ss_pred CCeEEEEc-CChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 2 FRHVAVIG-AGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG-~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
.++|.||| +|..|.+.|..|++.|++|.++++++
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 45899999 99999999999999999999998754
No 419
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=94.56 E-value=0.034 Score=48.10 Aligned_cols=33 Identities=24% Similarity=0.563 Sum_probs=31.0
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
++|.|||.|..|...|..|++.|++|+++++.+
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 589999999999999999999999999999864
No 420
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=94.56 E-value=0.037 Score=47.50 Aligned_cols=33 Identities=27% Similarity=0.518 Sum_probs=30.3
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCC--cEEEEeeCC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGH--TVVVYEKGE 35 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~--~v~lie~~~ 35 (354)
++|+|||+|..|..+|..|+..|+ +|.++|.++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 479999999999999999999998 999999853
No 421
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=94.55 E-value=0.039 Score=47.39 Aligned_cols=34 Identities=32% Similarity=0.611 Sum_probs=31.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
.++|.|||.|..|...|..|.+.|++|+++++++
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3689999999999999999999999999999864
No 422
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=94.55 E-value=0.015 Score=53.00 Aligned_cols=34 Identities=21% Similarity=0.456 Sum_probs=31.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
.++|+|+|+|-.|..+|..|.+.|++|+++|+++
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 4789999999999999999999999999999864
No 423
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=94.48 E-value=0.023 Score=51.18 Aligned_cols=33 Identities=21% Similarity=0.211 Sum_probs=30.6
Q ss_pred CeEEEEccCCCHHHHHHHHhccCCEEEEEEecC
Q 018550 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~ 230 (354)
++|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~ 33 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSA 33 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 369999999999999999999999999999865
No 424
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=94.47 E-value=0.038 Score=49.37 Aligned_cols=34 Identities=32% Similarity=0.346 Sum_probs=31.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
..+|+|||+|.+|+.++..|...|.+|+++|+..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3689999999999999999999999999999854
No 425
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=94.46 E-value=0.044 Score=47.38 Aligned_cols=34 Identities=18% Similarity=0.395 Sum_probs=30.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCC-cEEEEeeCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGH-TVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~-~v~lie~~~ 35 (354)
+++|+|||+|..|..+|..|+..|+ +|.++|.++
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 3689999999999999999999998 999999754
No 426
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=94.43 E-value=0.037 Score=50.55 Aligned_cols=33 Identities=30% Similarity=0.434 Sum_probs=30.8
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
++|.|||+|..|...|..|++.|++|+++|+++
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 579999999999999999999999999999864
No 427
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=94.42 E-value=0.04 Score=49.91 Aligned_cols=35 Identities=37% Similarity=0.543 Sum_probs=32.1
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCCc
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQV 37 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~~ 37 (354)
-+|.|||.|..|+..|..|++.|++|+++|+++.-
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~k 43 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARK 43 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTT
T ss_pred eEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 47999999999999999999999999999997643
No 428
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=94.41 E-value=0.022 Score=50.54 Aligned_cols=33 Identities=18% Similarity=0.267 Sum_probs=30.6
Q ss_pred eEEEEccCCCHHHHHHHHhcc--CCEEEEEEecCC
Q 018550 199 VVILIGHYASGLDIKRDLAGF--AKEVHIASRSVA 231 (354)
Q Consensus 199 ~v~ViG~G~~g~e~a~~l~~~--g~~v~~~~r~~~ 231 (354)
+|+|||+|++|+-+|..|++. |.+|+++++.+.
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~ 36 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDE 36 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCT
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCC
Confidence 699999999999999999999 999999998753
No 429
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=94.39 E-value=0.023 Score=50.64 Aligned_cols=33 Identities=21% Similarity=0.261 Sum_probs=30.4
Q ss_pred CeEEEEccCCCHHHHHHHHhccCCEEEEEEecC
Q 018550 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~ 230 (354)
..|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~ 37 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAERGHRVLVLERHT 37 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 369999999999999999999999999999854
No 430
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=94.39 E-value=0.042 Score=48.22 Aligned_cols=33 Identities=36% Similarity=0.375 Sum_probs=30.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCC-cEEEEeeC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGH-TVVVYEKG 34 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~-~v~lie~~ 34 (354)
..+|+|+|+|.+|..+|..|...|. +|+++|+.
T Consensus 192 ~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 192 EVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 3689999999999999999999998 89999985
No 431
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=94.37 E-value=0.024 Score=52.35 Aligned_cols=36 Identities=25% Similarity=0.345 Sum_probs=32.8
Q ss_pred CCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC
Q 018550 196 QDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA 231 (354)
Q Consensus 196 ~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~ 231 (354)
...+|+|||+|.+|+.+|..|++.|.+|+++++++.
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~ 67 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASER 67 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCC
Confidence 357899999999999999999999999999998764
No 432
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=94.36 E-value=0.055 Score=45.77 Aligned_cols=34 Identities=24% Similarity=0.498 Sum_probs=31.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
+++|+|.|+|..|..++..|.+.|++|+++.+..
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 3689999999999999999999999999999864
No 433
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=94.36 E-value=0.048 Score=48.47 Aligned_cols=34 Identities=29% Similarity=0.296 Sum_probs=31.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
..+|+|||+|.+|+.++..+...|.+|+++|+.+
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999864
No 434
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=94.34 E-value=0.045 Score=49.08 Aligned_cols=35 Identities=29% Similarity=0.420 Sum_probs=32.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQ 36 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~ 36 (354)
+.+|+|||.|..|..+|..|.+.|++|+++|+++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 35799999999999999999999999999998643
No 435
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.33 E-value=0.036 Score=46.48 Aligned_cols=36 Identities=22% Similarity=0.281 Sum_probs=33.1
Q ss_pred CCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC
Q 018550 196 QDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA 231 (354)
Q Consensus 196 ~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~ 231 (354)
.+++|+|||+|.+|...+..|.+.|++|+++.....
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~~ 47 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDLH 47 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEEC
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 579999999999999999999999999999997653
No 436
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=94.30 E-value=0.023 Score=50.38 Aligned_cols=33 Identities=21% Similarity=0.128 Sum_probs=30.8
Q ss_pred CeEEEEccCCCHHHHHHHHhccCCEEEEEEecC
Q 018550 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~ 230 (354)
..|+|||+|.+|+-+|..|++.|.+|+++.+..
T Consensus 18 ~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~ 50 (382)
T 1ryi_A 18 YEAVVIGGGIIGSAIAYYLAKENKNTALFESGT 50 (382)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 469999999999999999999999999999865
No 437
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=94.29 E-value=0.022 Score=50.32 Aligned_cols=32 Identities=28% Similarity=0.442 Sum_probs=30.1
Q ss_pred eEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 4 HVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 4 ~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
+|.|||+|..|.+.|..|++.|++|+++++++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 89999999999999999999999999999853
No 438
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=94.26 E-value=0.042 Score=49.86 Aligned_cols=75 Identities=17% Similarity=0.221 Sum_probs=49.8
Q ss_pred CCCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCCccccccCCCCC-CeEEecceeEEecCCcEEEccCcEE-ecCEE
Q 018550 195 FQDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVADETHEKQPGYD-NMWLHSMVERANEDGTVVFRNGRVV-SADVI 272 (354)
Q Consensus 195 ~~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~~~~~~~l~~~~-~~~~~~~v~~v~~~~~v~~~~g~~~-~~D~v 272 (354)
+.+++|+|||.|.+|+..|..|+++|.+|+.+..+........+. .+ ++..++.. ...+ .+|.|
T Consensus 3 ~~~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~~~~l~-~G~~~~~g~~~-------------~~~~~~~d~v 68 (439)
T 2x5o_A 3 YQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLP-EAVERHTGSLN-------------DEWLMAADLI 68 (439)
T ss_dssp CTTCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTTGGGSC-TTSCEEESSCC-------------HHHHHTCSEE
T ss_pred CCCCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcchhHHhh-CCCEEEECCCc-------------HHHhccCCEE
Confidence 356889999999999999999999999999988765322112222 22 22222210 0111 48999
Q ss_pred EEcccCCCccC
Q 018550 273 MHCTGLTGTST 283 (354)
Q Consensus 273 i~a~G~~~~~p 283 (354)
|++.|..++.|
T Consensus 69 V~s~gi~~~~p 79 (439)
T 2x5o_A 69 VASPGIALAHP 79 (439)
T ss_dssp EECTTSCTTCH
T ss_pred EeCCCCCCCCH
Confidence 99999985444
No 439
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=94.23 E-value=0.038 Score=50.11 Aligned_cols=33 Identities=24% Similarity=0.404 Sum_probs=30.6
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
++|.|||+|..|...|..|++.|++|+++|+++
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 379999999999999999999999999999853
No 440
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=94.20 E-value=0.043 Score=49.31 Aligned_cols=32 Identities=25% Similarity=0.419 Sum_probs=29.7
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
++|.|||+|..|+..|..|++ |++|+++|+++
T Consensus 37 mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 589999999999999999998 99999999864
No 441
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=94.20 E-value=0.034 Score=47.90 Aligned_cols=32 Identities=28% Similarity=0.294 Sum_probs=29.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHHc-----C-CcEEEEee
Q 018550 2 FRHVAVIGAGAAGLVVGHELLRE-----G-HTVVVYEK 33 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~-----g-~~v~lie~ 33 (354)
+++|.|||+|..|...|..|++. | ++|+++++
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 35899999999999999999999 9 99999987
No 442
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=94.20 E-value=0.045 Score=49.27 Aligned_cols=34 Identities=29% Similarity=0.469 Sum_probs=31.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
+.+|.|||.|+.|+..|..+++.|++|+.+|-++
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 4689999999999999999999999999999754
No 443
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=94.17 E-value=0.062 Score=44.99 Aligned_cols=34 Identities=24% Similarity=0.529 Sum_probs=31.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
.++++|||+|-+|.+++..|.+.|.+|+++.|..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3689999999999999999999999999999864
No 444
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=94.11 E-value=0.045 Score=47.55 Aligned_cols=31 Identities=29% Similarity=0.539 Sum_probs=29.5
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEee
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEK 33 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~ 33 (354)
++|.|||+|..|...|..|++.|++|+++++
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 3799999999999999999999999999998
No 445
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=94.11 E-value=0.062 Score=46.39 Aligned_cols=34 Identities=26% Similarity=0.380 Sum_probs=31.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCC-cEEEEeeCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGH-TVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~-~v~lie~~~ 35 (354)
.++|+|||+|..|.++|..|+..++ +++++|..+
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 3589999999999999999999998 999999864
No 446
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=94.10 E-value=0.026 Score=50.56 Aligned_cols=32 Identities=25% Similarity=0.280 Sum_probs=29.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHHH-cCCcEEEEe
Q 018550 1 MFRHVAVIGAGAAGLVVGHELLR-EGHTVVVYE 32 (354)
Q Consensus 1 ~~~~vvIIG~G~aG~~~a~~l~~-~g~~v~lie 32 (354)
|+++|+|||+|..|.+.|..|++ .|++|++++
T Consensus 1 ~~mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 1 MTVKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred CCceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 56789999999999999999988 599999998
No 447
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=94.09 E-value=0.034 Score=48.93 Aligned_cols=32 Identities=31% Similarity=0.349 Sum_probs=30.1
Q ss_pred CeEEEEccCCCHHHHHHHHhccCCEEEEEEec
Q 018550 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRS 229 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~ 229 (354)
..|+|||+|.+|+-+|..|++.|.+|+++.+.
T Consensus 7 ~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~ 38 (363)
T 1c0p_A 7 KRVVVLGSGVIGLSSALILARKGYSVHILARD 38 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCEEEEEecc
Confidence 57999999999999999999999999999975
No 448
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=94.08 E-value=0.026 Score=50.04 Aligned_cols=33 Identities=18% Similarity=0.128 Sum_probs=30.3
Q ss_pred CeEEEEccCCCHHHHHHHHhccCCEEEEEEecC
Q 018550 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~ 230 (354)
..|+|||+|.+|+-+|..|++.|.+|+++.+..
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~ 36 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFD 36 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 369999999999999999999999999999754
No 449
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=94.07 E-value=0.057 Score=46.45 Aligned_cols=33 Identities=27% Similarity=0.459 Sum_probs=29.7
Q ss_pred CeEEEEcCChHHHHHHHHHHHc--CCcEEEEeeCC
Q 018550 3 RHVAVIGAGAAGLVVGHELLRE--GHTVVVYEKGE 35 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~--g~~v~lie~~~ 35 (354)
++|+|||+|..|..+|..|++. +.+|+++|+++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4799999999999999999985 78999999864
No 450
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=94.07 E-value=0.02 Score=50.48 Aligned_cols=33 Identities=15% Similarity=0.107 Sum_probs=30.4
Q ss_pred CeEEEEccCCCHHHHHHHHhccCCEEEEEEecC
Q 018550 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~ 230 (354)
..|+|||+|.+|+-+|..|++.|.+|+++.+..
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~ 35 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHM 35 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 369999999999999999999999999999864
No 451
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=94.07 E-value=0.055 Score=43.54 Aligned_cols=33 Identities=33% Similarity=0.479 Sum_probs=30.2
Q ss_pred CeEEEEc-CChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 3 RHVAVIG-AGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 3 ~~vvIIG-~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
++|+||| +|..|...|..|.+.|++|+++++++
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3799999 99999999999999999999999853
No 452
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=94.04 E-value=0.041 Score=50.49 Aligned_cols=34 Identities=24% Similarity=0.255 Sum_probs=30.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHHc--CCcEEEEeeCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLRE--GHTVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~--g~~v~lie~~~ 35 (354)
+++|.|||+|..|+..|..|++. |++|+++|+++
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 36899999999999999999998 78999999753
No 453
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=94.02 E-value=0.062 Score=47.30 Aligned_cols=33 Identities=18% Similarity=0.378 Sum_probs=30.8
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
++|+|+|+|.+|.+++..|...|.+|+++++.+
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 689999999999999999999999999999853
No 454
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=93.99 E-value=0.068 Score=42.50 Aligned_cols=33 Identities=27% Similarity=0.509 Sum_probs=30.8
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 3 RHVAVIGA-GAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 3 ~~vvIIG~-G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
++|+|+|| |..|..++..|.+.|++|+++.+.+
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 68999999 9999999999999999999999853
No 455
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=93.99 E-value=0.061 Score=46.28 Aligned_cols=32 Identities=31% Similarity=0.432 Sum_probs=30.3
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCC-cEEEEeeC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGH-TVVVYEKG 34 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~-~v~lie~~ 34 (354)
++|+|||+|..|..+|..|+..|+ +++++|..
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 589999999999999999999999 99999985
No 456
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=93.98 E-value=0.059 Score=46.52 Aligned_cols=33 Identities=24% Similarity=0.337 Sum_probs=29.9
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCC--cEEEEeeCC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGH--TVVVYEKGE 35 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~--~v~lie~~~ 35 (354)
++|+|||+|..|..+|..|+..+. ++.++|.+.
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 589999999999999999999987 899999753
No 457
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=93.97 E-value=0.056 Score=49.51 Aligned_cols=33 Identities=33% Similarity=0.596 Sum_probs=31.0
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
++|.|||+|..|...|..|++.|++|+++|+++
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 589999999999999999999999999999864
No 458
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=93.97 E-value=0.052 Score=46.66 Aligned_cols=33 Identities=33% Similarity=0.660 Sum_probs=30.2
Q ss_pred CeEEEEcCChHHHHHHHHHHHcC--CcEEEEeeCC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREG--HTVVVYEKGE 35 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g--~~v~lie~~~ 35 (354)
++|+|||+|..|.++|..|++.| .+|+++|++.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 58999999999999999999999 6999999853
No 459
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=93.97 E-value=0.058 Score=47.35 Aligned_cols=33 Identities=30% Similarity=0.517 Sum_probs=31.2
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
++|.|||.|..|...|..|++.|++|+++++.+
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 689999999999999999999999999999864
No 460
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=93.96 E-value=0.068 Score=45.20 Aligned_cols=34 Identities=18% Similarity=0.291 Sum_probs=31.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCC---cEEEEeeCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGH---TVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~---~v~lie~~~ 35 (354)
+++|.|||+|..|.+.|..|.+.|+ +|+++++++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 4789999999999999999999998 999999864
No 461
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=93.93 E-value=0.035 Score=50.81 Aligned_cols=34 Identities=24% Similarity=0.275 Sum_probs=31.5
Q ss_pred CeEEEEccCCCHHHHHHHHhccCC--EEEEEEecCC
Q 018550 198 QVVILIGHYASGLDIKRDLAGFAK--EVHIASRSVA 231 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~~g~--~v~~~~r~~~ 231 (354)
++|+|||+|.+|+-+|..|++.|. +|+++++++.
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~ 38 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSER 38 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCC
Confidence 579999999999999999999998 9999998764
No 462
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=93.87 E-value=0.04 Score=48.71 Aligned_cols=34 Identities=18% Similarity=0.252 Sum_probs=32.0
Q ss_pred CCCeEEEEccCCCHHHHHHHHhccCCEEEEEEec
Q 018550 196 QDQVVILIGHYASGLDIKRDLAGFAKEVHIASRS 229 (354)
Q Consensus 196 ~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~ 229 (354)
.+.+|+|||+|.+|+-+|..|++.|.+|++++++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~ 76 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEAN 76 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEecc
Confidence 4578999999999999999999999999999988
No 463
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=93.86 E-value=0.028 Score=49.80 Aligned_cols=33 Identities=24% Similarity=0.411 Sum_probs=30.7
Q ss_pred CeEEEEccCCCHHHHHHHHhccCCEEEEEEecC
Q 018550 198 QVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~ 230 (354)
..|+|||+|.+|+-+|..|++.|.+|+++.+..
T Consensus 6 ~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~ 38 (382)
T 1y56_B 6 SEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRF 38 (382)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 469999999999999999999999999999865
No 464
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=93.82 E-value=0.064 Score=46.22 Aligned_cols=33 Identities=30% Similarity=0.595 Sum_probs=30.8
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
++|.|||+|..|...|..|.+.|++|+++++++
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 689999999999999999999999999999854
No 465
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=93.82 E-value=0.056 Score=46.68 Aligned_cols=33 Identities=21% Similarity=0.470 Sum_probs=30.2
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCC--cEEEEeeCC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGH--TVVVYEKGE 35 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~--~v~lie~~~ 35 (354)
++|+|||+|..|.++|..|++.|+ +|+++|+++
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 479999999999999999999998 999999853
No 466
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=93.81 E-value=0.063 Score=44.79 Aligned_cols=33 Identities=15% Similarity=0.388 Sum_probs=30.5
Q ss_pred CeEEEEcCChHHHHHHHHHHHcC----CcEEEEeeCC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREG----HTVVVYEKGE 35 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g----~~v~lie~~~ 35 (354)
++|.|||+|..|.+.|..|.+.| ++|.++++++
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~ 41 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSK 41 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCc
Confidence 68999999999999999999999 6999999864
No 467
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=93.80 E-value=0.062 Score=45.96 Aligned_cols=34 Identities=21% Similarity=0.465 Sum_probs=30.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCC--cEEEEeeCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGH--TVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~--~v~lie~~~ 35 (354)
+++|+|||+|..|...|..|+..|+ ++.|+|..+
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 3689999999999999999999998 999999864
No 468
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=93.79 E-value=0.083 Score=42.72 Aligned_cols=35 Identities=20% Similarity=0.434 Sum_probs=30.7
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHH-HcCCcEEEEeeCC
Q 018550 1 MFRHVAVIGA-GAAGLVVGHELL-REGHTVVVYEKGE 35 (354)
Q Consensus 1 ~~~~vvIIG~-G~aG~~~a~~l~-~~g~~v~lie~~~ 35 (354)
|+++|+|.|| |..|.+++..|+ +.|++|+++.+++
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSH
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCc
Confidence 3456999995 999999999999 8999999999863
No 469
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=93.77 E-value=0.072 Score=43.60 Aligned_cols=34 Identities=32% Similarity=0.373 Sum_probs=31.4
Q ss_pred CCeEEEEcC-ChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 2 FRHVAVIGA-GAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~-G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
.++|+|.|| |..|..++..|.+.|++|+++.|++
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 478999998 9999999999999999999999864
No 470
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=93.75 E-value=0.07 Score=45.08 Aligned_cols=33 Identities=24% Similarity=0.448 Sum_probs=30.2
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCC--cEEEEeeCC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGH--TVVVYEKGE 35 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~--~v~lie~~~ 35 (354)
++|.|||+|..|.+.|..|.+.|+ +|+++++++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 579999999999999999999998 899998853
No 471
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=93.73 E-value=0.056 Score=46.54 Aligned_cols=32 Identities=22% Similarity=0.430 Sum_probs=30.4
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCC-cEEEEeeC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGH-TVVVYEKG 34 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~-~v~lie~~ 34 (354)
++|.|||.|..|...|..|++.|+ +|++++++
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 689999999999999999999999 99999985
No 472
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=93.73 E-value=0.092 Score=48.30 Aligned_cols=57 Identities=16% Similarity=0.004 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHhC-CcceEEeceEEEEEEEeCCCcEEEEEeecCCceEEEEeCEEEEeeCCCC
Q 018550 103 EEVLRYLQNFAREFG-VDQVVRLHTEVLNARLVESNKWKVKSRKKDDVVEEETFDAVVVCNGHFS 166 (354)
Q Consensus 103 ~~~~~~l~~~~~~~~-~~~~v~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~~~d~vIlAtG~~s 166 (354)
..+.+.+.+.+...+ ++ ++++++|++|...+ +.+.|++.+|. ++.+|+||+|+|...
T Consensus 255 ~~l~~~l~~~l~~~g~~~--i~~~~~V~~i~~~~-~~v~v~~~~g~----~~~ad~vI~a~~~~~ 312 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLG--YVFGCPVRSVVNER-DAARVTARDGR----EFVAKRVVCTIPLNV 312 (495)
T ss_dssp HHHHHHHHHHHHTTTCEE--EESSCCEEEEEECS-SSEEEEETTCC----EEEEEEEEECCCGGG
T ss_pred HHHHHHHHHHhhhcCceE--EEeCCEEEEEEEcC-CEEEEEECCCC----EEEcCEEEECCCHHH
Confidence 455555555555555 66 89999999999876 77888887664 789999999999643
No 473
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=93.70 E-value=0.078 Score=44.60 Aligned_cols=33 Identities=27% Similarity=0.228 Sum_probs=30.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKG 34 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~ 34 (354)
.++++|+|+|-+|.++|..|++.|.+|++++|+
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 368999999999999999999999999999885
No 474
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=93.69 E-value=0.033 Score=50.21 Aligned_cols=32 Identities=31% Similarity=0.365 Sum_probs=29.9
Q ss_pred eEEEEccCCCHHHHHHHHhccCCEEEEEEecC
Q 018550 199 VVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (354)
Q Consensus 199 ~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~ 230 (354)
.|+|||+|.+|+-+|..|++.|.+|+++++++
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~ 34 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNAGKKVLLLEGGE 34 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECCcHHHHHHHHHHHHcCCeEEEEecCC
Confidence 59999999999999999999999999999854
No 475
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=93.68 E-value=0.078 Score=45.51 Aligned_cols=34 Identities=21% Similarity=0.338 Sum_probs=31.6
Q ss_pred CCeEEEEcC-ChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 2 FRHVAVIGA-GAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~-G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
+++|+|.|| |..|..++..|.+.|++|+++++..
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 41 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLR 41 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCS
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCC
Confidence 578999999 9999999999999999999999864
No 476
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=93.68 E-value=0.078 Score=46.84 Aligned_cols=34 Identities=21% Similarity=0.342 Sum_probs=31.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
.++|+|+|+|..|..+|..|...|.+|+++|+.+
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3689999999999999999999999999999853
No 477
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=93.67 E-value=0.075 Score=45.52 Aligned_cols=34 Identities=26% Similarity=0.436 Sum_probs=31.3
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCcEEEEeeC
Q 018550 1 MFRHVAVIGA-GAAGLVVGHELLREGHTVVVYEKG 34 (354)
Q Consensus 1 ~~~~vvIIG~-G~aG~~~a~~l~~~g~~v~lie~~ 34 (354)
|+++|+|.|| |..|..++..|.+.|++|+++.+.
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~ 35 (311)
T 3m2p_A 1 MSLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRS 35 (311)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCC
Confidence 7789999995 999999999999999999999986
No 478
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=93.67 E-value=0.071 Score=44.99 Aligned_cols=33 Identities=24% Similarity=0.493 Sum_probs=30.2
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
++|.|||+|..|.+.|..|.+.|++|+++++++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 379999999999999999999999999998753
No 479
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=93.63 E-value=0.084 Score=42.49 Aligned_cols=33 Identities=30% Similarity=0.467 Sum_probs=30.2
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 3 RHVAVIGA-GAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 3 ~~vvIIG~-G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
++|+|+|| |..|..++..|.+.|++|+++.|++
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 46999996 9999999999999999999999864
No 480
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=93.62 E-value=0.073 Score=48.65 Aligned_cols=35 Identities=17% Similarity=0.275 Sum_probs=32.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGEQ 36 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~~ 36 (354)
+++|.|||.|..|..+|..|+++|++|+++++++.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~ 38 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVS 38 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46899999999999999999999999999998653
No 481
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=93.62 E-value=0.087 Score=45.46 Aligned_cols=33 Identities=24% Similarity=0.499 Sum_probs=30.6
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCC-cEEEEeeCC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGH-TVVVYEKGE 35 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~-~v~lie~~~ 35 (354)
++|+|||+|..|.++|..|+..+. ++.++|..+
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 689999999999999999999988 999999864
No 482
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=93.60 E-value=0.048 Score=50.13 Aligned_cols=36 Identities=17% Similarity=0.205 Sum_probs=32.7
Q ss_pred CCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecCC
Q 018550 196 QDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSVA 231 (354)
Q Consensus 196 ~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~~ 231 (354)
...+|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~ 45 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTR 45 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCC
Confidence 346899999999999999999999999999998764
No 483
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=93.59 E-value=0.04 Score=49.58 Aligned_cols=35 Identities=23% Similarity=0.265 Sum_probs=31.8
Q ss_pred CCeEEEEccCCCHHHHHHHHhccC-CEEEEEEecCC
Q 018550 197 DQVVILIGHYASGLDIKRDLAGFA-KEVHIASRSVA 231 (354)
Q Consensus 197 ~~~v~ViG~G~~g~e~a~~l~~~g-~~v~~~~r~~~ 231 (354)
..+|+|||+|.+|+-+|..|++.| .+|+++++++.
T Consensus 6 ~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~ 41 (424)
T 2b9w_A 6 DSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDH 41 (424)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCC
Confidence 467999999999999999999999 89999998764
No 484
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=93.58 E-value=0.083 Score=46.80 Aligned_cols=34 Identities=35% Similarity=0.341 Sum_probs=31.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
.++|+|||+|..|..+|..+...|.+|+++|+.+
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4689999999999999999999999999999853
No 485
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=93.54 E-value=0.095 Score=44.58 Aligned_cols=34 Identities=26% Similarity=0.323 Sum_probs=31.1
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHcCCcEEEEeeCCC
Q 018550 3 RHVAVIGA-GAAGLVVGHELLREGHTVVVYEKGEQ 36 (354)
Q Consensus 3 ~~vvIIG~-G~aG~~~a~~l~~~g~~v~lie~~~~ 36 (354)
++|+|.|| |+.|..++..|.+.|++|+++.|++.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~ 35 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG 35 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 57999998 99999999999999999999988654
No 486
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=93.53 E-value=0.084 Score=45.67 Aligned_cols=33 Identities=27% Similarity=0.469 Sum_probs=30.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCC-cEEEEeeC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGH-TVVVYEKG 34 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~-~v~lie~~ 34 (354)
..+|+|||+|-.|..+|..|++.|+ +++++|.+
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D 67 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 67 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCC
Confidence 4689999999999999999999998 79999975
No 487
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=93.53 E-value=0.046 Score=47.98 Aligned_cols=34 Identities=18% Similarity=0.335 Sum_probs=31.1
Q ss_pred CeEEEEcCChHHHHHHHHHHHcC-------CcEEEEeeCCC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREG-------HTVVVYEKGEQ 36 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g-------~~v~lie~~~~ 36 (354)
++|.|||+|..|.+.|..|++.| ++|+++++++.
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 58999999999999999999999 89999998653
No 488
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=93.49 E-value=0.073 Score=44.45 Aligned_cols=33 Identities=21% Similarity=0.455 Sum_probs=30.2
Q ss_pred CeEEEEcCChHHHHHHHHHHHcC-CcEEEEeeCC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREG-HTVVVYEKGE 35 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g-~~v~lie~~~ 35 (354)
++|.|||+|..|...|..|.+.| ++|.++++++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 37999999999999999999999 9999999853
No 489
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=93.48 E-value=0.028 Score=46.12 Aligned_cols=33 Identities=27% Similarity=0.246 Sum_probs=29.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
+++|+|+|+|..|..+|..|.+.|+ |+++|+++
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 4689999999999999999999999 99999864
No 490
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=93.46 E-value=0.075 Score=48.41 Aligned_cols=35 Identities=11% Similarity=0.135 Sum_probs=32.4
Q ss_pred CCCeEEEEccCCCHHHHHHHHhccCCEEEEEEecC
Q 018550 196 QDQVVILIGHYASGLDIKRDLAGFAKEVHIASRSV 230 (354)
Q Consensus 196 ~~~~v~ViG~G~~g~e~a~~l~~~g~~v~~~~r~~ 230 (354)
.+++|+|||+|.+|...+..|.+.|.+|+++....
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~ 45 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALTF 45 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC
Confidence 56899999999999999999999999999998754
No 491
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=93.46 E-value=0.086 Score=45.88 Aligned_cols=34 Identities=26% Similarity=0.435 Sum_probs=31.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
.++|.|||.|..|.++|..|.+.|++|.++|+++
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3689999999999999999999999999999864
No 492
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=93.46 E-value=0.079 Score=45.21 Aligned_cols=34 Identities=21% Similarity=0.253 Sum_probs=30.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCC-cEEEEeeCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGH-TVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~-~v~lie~~~ 35 (354)
.++++|||+|-+|.++|..|.+.|. +|++++|..
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 3689999999999999999999998 899999853
No 493
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=93.43 E-value=0.066 Score=49.07 Aligned_cols=34 Identities=18% Similarity=0.402 Sum_probs=31.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
+++|.|||+|..|..+|..|++.|++|+++++.+
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 4789999999999999999999999999999863
No 494
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=93.43 E-value=0.06 Score=45.63 Aligned_cols=32 Identities=31% Similarity=0.469 Sum_probs=29.5
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
++|.|||+|..|...|..|.+ |++|+++++++
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 579999999999999999999 99999999854
No 495
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=93.43 E-value=0.037 Score=49.37 Aligned_cols=33 Identities=21% Similarity=0.222 Sum_probs=30.6
Q ss_pred CeEEEEccCCCHHHHHHHHhc-cC-CEEEEEEecC
Q 018550 198 QVVILIGHYASGLDIKRDLAG-FA-KEVHIASRSV 230 (354)
Q Consensus 198 ~~v~ViG~G~~g~e~a~~l~~-~g-~~v~~~~r~~ 230 (354)
..|+|||+|.+|+-+|..|++ .| .+|+++.+.+
T Consensus 22 ~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~ 56 (405)
T 2gag_B 22 YDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGW 56 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 479999999999999999999 89 8999999865
No 496
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=93.42 E-value=0.074 Score=45.24 Aligned_cols=33 Identities=18% Similarity=0.294 Sum_probs=30.1
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCC--cEEEEeeCC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGH--TVVVYEKGE 35 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~--~v~lie~~~ 35 (354)
++|+|||+|..|.++|..|+..+. ++.++|..+
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 479999999999999999999998 899999854
No 497
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=93.40 E-value=0.072 Score=45.36 Aligned_cols=33 Identities=24% Similarity=0.477 Sum_probs=30.4
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
++|.|||+|..|...|..|.+.|++|+++++++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 369999999999999999999999999999864
No 498
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=93.40 E-value=0.055 Score=48.41 Aligned_cols=32 Identities=28% Similarity=0.348 Sum_probs=29.4
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 3 RHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 3 ~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
++|.|||+|..|+..|..|++ |++|+++|+++
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 379999999999999999999 99999999853
No 499
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=93.39 E-value=0.075 Score=45.36 Aligned_cols=34 Identities=35% Similarity=0.490 Sum_probs=31.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeCC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKGE 35 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~~ 35 (354)
+++|.|||+|..|...|..|.+.|++|+++++++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3689999999999999999999999999999853
No 500
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=93.39 E-value=0.075 Score=48.38 Aligned_cols=33 Identities=21% Similarity=0.264 Sum_probs=31.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCcEEEEeeC
Q 018550 2 FRHVAVIGAGAAGLVVGHELLREGHTVVVYEKG 34 (354)
Q Consensus 2 ~~~vvIIG~G~aG~~~a~~l~~~g~~v~lie~~ 34 (354)
.++|+|||+|..|...+..|.+.|.+|++++++
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 478999999999999999999999999999975
Done!