BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018554
(354 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255559360|ref|XP_002520700.1| RNA binding protein, putative [Ricinus communis]
gi|223540085|gb|EEF41662.1| RNA binding protein, putative [Ricinus communis]
Length = 436
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 299/347 (86%), Positives = 318/347 (91%), Gaps = 1/347 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
MAE KKEKKSSEE VKLFVGQVPKHMTE QLLAMFKEFALVDEVNIIKDKTTRASRGCCF
Sbjct: 1 MAEDKKEKKSSEESVKLFVGQVPKHMTEVQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLF+GMLPKNVSEAEVS
Sbjct: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSEAEVS 120
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LFS YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW
Sbjct: 121 ELFSTYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
Query: 181 ADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQY 240
ADTEKERQARRAQK QSQA+NLPNADSQHPSLFGALPMGY P YNGYGYQA G+YGLM Y
Sbjct: 181 ADTEKERQARRAQKVQSQASNLPNADSQHPSLFGALPMGYVPQYNGYGYQAPGTYGLMPY 240
Query: 241 RLPPMQNQPGFHGIIPPVNQGNAMR-GASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQ 299
RLPP+Q+QP FH IIPPVNQGNA+R G PDL +MGPRNYA+PP+ +VGS YPAVPG+Q
Sbjct: 241 RLPPLQSQPAFHSIIPPVNQGNALRGGVRPDLGPSMGPRNYALPPASYVGSAYPAVPGIQ 300
Query: 300 YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEG 346
YPM YPGGM+ RPL++SPG+VSP V +SN +TSS + SGGQ+EG
Sbjct: 301 YPMAYPGGMMSPRPLSSSPGAVSPTVGSSNSATSSGVSSSSGGQLEG 347
>gi|225436819|ref|XP_002270390.1| PREDICTED: CUGBP Elav-like family member 5 isoform 1 [Vitis
vinifera]
gi|296086641|emb|CBI32276.3| unnamed protein product [Vitis vinifera]
Length = 437
Score = 586 bits (1511), Expect = e-165, Method: Compositional matrix adjust.
Identities = 281/347 (80%), Positives = 313/347 (90%), Gaps = 1/347 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
MAE+ K +K+SE+ VKLFVGQVPK+MTEAQLLAMFKEFALVDEVNIIKDK TRASRGCCF
Sbjct: 1 MAEAPKPRKASEDSVKLFVGQVPKNMTEAQLLAMFKEFALVDEVNIIKDKATRASRGCCF 60
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
VICPSRQEADKAVNACHNK+TLPGASSPLQVKYADGELERLEHKLF+GMLPKNVSEAEVS
Sbjct: 61 VICPSRQEADKAVNACHNKRTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSEAEVS 120
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
+LFS YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW
Sbjct: 121 SLFSKYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
Query: 181 ADTEKERQARRAQKAQSQANNLPNADS-QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQ 239
ADTEKERQAR+AQKAQSQA+NLP+ADS QHPSLFGALP+GY PPYNGYGYQA G+YGLMQ
Sbjct: 181 ADTEKERQARKAQKAQSQASNLPSADSGQHPSLFGALPLGYVPPYNGYGYQAPGAYGLMQ 240
Query: 240 YRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQ 299
YR+PPMQ+Q FH +IP VNQG+AMR +PDL+ + PRNYA+P + ++GS YPA+PGLQ
Sbjct: 241 YRMPPMQSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPRNYAVPSASYMGSAYPALPGLQ 300
Query: 300 YPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEG 346
YPM Y GG++ H+PL+ SPGS PA+ SN T+S G SGGQ+EG
Sbjct: 301 YPMAYHGGIMSHQPLSGSPGSRPPAMMTSNSPTNSGAGASSGGQVEG 347
>gi|359479768|ref|XP_003632354.1| PREDICTED: CUGBP Elav-like family member 5 isoform 2 [Vitis
vinifera]
Length = 447
Score = 577 bits (1487), Expect = e-162, Method: Compositional matrix adjust.
Identities = 281/357 (78%), Positives = 313/357 (87%), Gaps = 11/357 (3%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
MAE+ K +K+SE+ VKLFVGQVPK+MTEAQLLAMFKEFALVDEVNIIKDK TRASRGCCF
Sbjct: 1 MAEAPKPRKASEDSVKLFVGQVPKNMTEAQLLAMFKEFALVDEVNIIKDKATRASRGCCF 60
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL----------EHKLFIGML 110
VICPSRQEADKAVNACHNK+TLPGASSPLQVKYADGELERL EHKLF+GML
Sbjct: 61 VICPSRQEADKAVNACHNKRTLPGASSPLQVKYADGELERLGVIFCHPCYPEHKLFVGML 120
Query: 111 PKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKME 170
PKNVSEAEVS+LFS YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKME
Sbjct: 121 PKNVSEAEVSSLFSKYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKME 180
Query: 171 GSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS-QHPSLFGALPMGYAPPYNGYGY 229
GSSVPLVVKWADTEKERQAR+AQKAQSQA+NLP+ADS QHPSLFGALP+GY PPYNGYGY
Sbjct: 181 GSSVPLVVKWADTEKERQARKAQKAQSQASNLPSADSGQHPSLFGALPLGYVPPYNGYGY 240
Query: 230 QASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVG 289
QA G+YGLMQYR+PPMQ+Q FH +IP VNQG+AMR +PDL+ + PRNYA+P + ++G
Sbjct: 241 QAPGAYGLMQYRMPPMQSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPRNYAVPSASYMG 300
Query: 290 SGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEG 346
S YPA+PGLQYPM Y GG++ H+PL+ SPGS PA+ SN T+S G SGGQ+EG
Sbjct: 301 SAYPALPGLQYPMAYHGGIMSHQPLSGSPGSRPPAMMTSNSPTNSGAGASSGGQVEG 357
>gi|224128620|ref|XP_002320377.1| predicted protein [Populus trichocarpa]
gi|222861150|gb|EEE98692.1| predicted protein [Populus trichocarpa]
Length = 432
Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust.
Identities = 277/337 (82%), Positives = 300/337 (89%), Gaps = 5/337 (1%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+EE VKLFVGQVPK+MTEA+LLAMFK+FALVDEVNIIKDKTTRASRGCCF+ICPSRQEAD
Sbjct: 12 NEESVKLFVGQVPKNMTEAELLAMFKDFALVDEVNIIKDKTTRASRGCCFLICPSRQEAD 71
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLF+GMLPKNVSEAEVS LFS YGTIK
Sbjct: 72 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSEAEVSDLFSKYGTIK 131
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
DLQILRGSQQTSK CAFLKYETKEQALAALE INGKHKMEGSSVPLVVKWADTEKERQAR
Sbjct: 132 DLQILRGSQQTSKSCAFLKYETKEQALAALEDINGKHKMEGSSVPLVVKWADTEKERQAR 191
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPG 250
RAQKAQSQA +PN DSQHPSLFGALPMGYAPPYNGYGYQA G YGLM YRLPPMQNQP
Sbjct: 192 RAQKAQSQA--MPNTDSQHPSLFGALPMGYAPPYNGYGYQAPGVYGLMPYRLPPMQNQPA 249
Query: 251 FHGIIPPVNQGNAMRGA-SPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGML 309
FH ++PPVNQGN +RG PDLS N+ PRNYA P+ ++GS YP V GLQYP+ YPG M+
Sbjct: 250 FHSMVPPVNQGNVLRGGIRPDLSPNISPRNYA--PATYMGSAYPTVTGLQYPVAYPGAMM 307
Query: 310 GHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEG 346
HRPL++SPG++SP V +SN +T S G SG Q+EG
Sbjct: 308 THRPLSSSPGALSPTVVSSNSATPSGVGGSSGVQVEG 344
>gi|356505495|ref|XP_003521526.1| PREDICTED: CUGBP Elav-like family member 1-like [Glycine max]
Length = 431
Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust.
Identities = 281/346 (81%), Positives = 304/346 (87%), Gaps = 4/346 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
MAE K+E KSSEE VKLFVGQVPKHMTE +LLAMFKEFALVDEVNIIKDK TRASRGCCF
Sbjct: 1 MAEGKEESKSSEESVKLFVGQVPKHMTEPELLAMFKEFALVDEVNIIKDKATRASRGCCF 60
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
VICPSR+EADKAVNACHNK+TLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSE E+S
Sbjct: 61 VICPSREEADKAVNACHNKRTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEVEIS 120
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
ALFS YGTIKDLQILRGSQQTSKGCAFLKYETKEQAL ALEAINGKHKMEGSSVPLVVKW
Sbjct: 121 ALFSKYGTIKDLQILRGSQQTSKGCAFLKYETKEQALTALEAINGKHKMEGSSVPLVVKW 180
Query: 181 ADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQY 240
ADTEKERQARRAQKAQSQA+N+P+ DSQHPSLFGALPM Y PPYNGYGYQA YGLM Y
Sbjct: 181 ADTEKERQARRAQKAQSQASNVPHTDSQHPSLFGALPMSYVPPYNGYGYQAPVGYGLMPY 240
Query: 241 RLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQY 300
R+PPMQ+Q G+H ++P +NQGNA+R PDL NM PRNY +PP+ +VGS YPAVPGLQ+
Sbjct: 241 RMPPMQSQHGYHNMMPHMNQGNALR---PDLGPNMNPRNYHVPPASYVGS-YPAVPGLQH 296
Query: 301 PMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEG 346
PM YP GM+ RP+N SPGSVSPA N+N + SS SGGQ EG
Sbjct: 297 PMAYPTGMISPRPMNTSPGSVSPASGNNNHAASSGASKNSGGQAEG 342
>gi|147772817|emb|CAN71673.1| hypothetical protein VITISV_044358 [Vitis vinifera]
Length = 450
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 280/401 (69%), Positives = 313/401 (78%), Gaps = 55/401 (13%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
MAE+ K +K+SE+ VKLFVGQVPK+MTEAQLLAMFKEFALVDEVNIIKDK TRASRGCCF
Sbjct: 1 MAEAPKPRKASEDSVKLFVGQVPKNMTEAQLLAMFKEFALVDEVNIIKDKATRASRGCCF 60
Query: 61 VICPSRQEADKAVNACH-NKKTLPG----------------------------------- 84
VICPSRQEADKAVNACH +K+TLPG
Sbjct: 61 VICPSRQEADKAVNACHSDKRTLPGKHVNISHIGFMWHDAAADAWKIKATIVANENQQRK 120
Query: 85 ------------------ASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
ASSPLQVKYADGELERLEHKLF+GMLPKNVSEAEVS+LFS Y
Sbjct: 121 KCTREHTNFGLRLAFQVSASSPLQVKYADGELERLEHKLFVGMLPKNVSEAEVSSLFSKY 180
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 186
GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE
Sbjct: 181 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 240
Query: 187 RQARRAQKAQSQANNLPNADS-QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPM 245
RQAR+AQKAQSQA+NLP+ADS QHPSLFGALP+GY PPYNGYGYQA G+YGLMQYR+PPM
Sbjct: 241 RQARKAQKAQSQASNLPSADSGQHPSLFGALPLGYVPPYNGYGYQAPGAYGLMQYRMPPM 300
Query: 246 QNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYP 305
Q+Q FH +IP VNQG+AMR +PDL+ + PRNYA+P + ++GS YPA+PGLQYPM Y
Sbjct: 301 QSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPRNYAVPSASYMGSAYPALPGLQYPMAYH 360
Query: 306 GGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEG 346
GG++ H+PL+ SPGS PA+ SN T+S G SGGQ+EG
Sbjct: 361 GGIMSHQPLSGSPGSRPPAMMTSNSPTNSGAGASSGGQVEG 401
>gi|449462310|ref|XP_004148884.1| PREDICTED: CUGBP Elav-like family member 2-like [Cucumis sativus]
gi|449491521|ref|XP_004158924.1| PREDICTED: CUGBP Elav-like family member 2-like [Cucumis sativus]
Length = 438
Score = 543 bits (1398), Expect = e-152, Method: Compositional matrix adjust.
Identities = 276/353 (78%), Positives = 297/353 (84%), Gaps = 11/353 (3%)
Query: 1 MAESKK--EKKSS-----EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR 53
MAE + E+K S E+ VKLFVGQVPKHMTE QLL MF+EFALVDEVNII+DKTTR
Sbjct: 1 MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTR 60
Query: 54 ASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN 113
ASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN
Sbjct: 61 ASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN 120
Query: 114 VSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSS 173
VSE EVS LFS YGTIKDLQILRGSQQTSKGCAFLKYETK+QA+AALEAINGK KMEGSS
Sbjct: 121 VSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSS 180
Query: 174 VPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASG 233
VPLVVKWADTEKERQAR+AQKAQSQA N+ NADSQHPSLFGA+P+GY PPYNGYGYQA G
Sbjct: 181 VPLVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPG 240
Query: 234 SYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYP 293
SYGLMQY LPPMQNQ GF +IP +NQGNAMRG PDL M RNYAMPP+ + S YP
Sbjct: 241 SYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASY--SAYP 298
Query: 294 AVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEG 346
VP LQ+PM YPGGM+ +++SPG P N S +SS G GSGGQIEG
Sbjct: 299 GVPALQHPMAYPGGMMSPGVVSSSPGP-GPFTGGKN-SPTSSMGKGSGGQIEG 349
>gi|356572661|ref|XP_003554485.1| PREDICTED: CUGBP Elav-like family member 2-like [Glycine max]
Length = 429
Score = 537 bits (1383), Expect = e-150, Method: Compositional matrix adjust.
Identities = 266/332 (80%), Positives = 291/332 (87%), Gaps = 4/332 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVGQVPKHMTE +LLAMFKEFALVDEVNIIKDK TRASRGCCF+ICPSR+EADKAVN
Sbjct: 13 VKLFVGQVPKHMTEPELLAMFKEFALVDEVNIIKDKATRASRGCCFLICPSREEADKAVN 72
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSE E+SALFS YGTIKDLQI
Sbjct: 73 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEVEISALFSKYGTIKDLQI 132
Query: 135 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKME SSVPLVVKWADTEKERQARRAQK
Sbjct: 133 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEDSSVPLVVKWADTEKERQARRAQK 192
Query: 195 AQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGI 254
AQSQA+N+P+ DSQH S+FGALPM Y PPYNGY YQA G YGLM YR+PPMQ+Q G+H +
Sbjct: 193 AQSQASNVPHTDSQHLSMFGALPMSYVPPYNGYAYQAPGGYGLMPYRMPPMQSQHGYHNV 252
Query: 255 IPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPL 314
+P +NQ NA+R PDL NM PRNY +PP+ +V S YPAVPGLQ+PM YP GM+ RP+
Sbjct: 253 MPHMNQVNALR---PDLGPNMNPRNYHVPPASYV-SSYPAVPGLQHPMAYPTGMISPRPM 308
Query: 315 NNSPGSVSPAVANSNPSTSSSGGTGSGGQIEG 346
N SPGSVSPA N++ + SS SGGQ+EG
Sbjct: 309 NTSPGSVSPAGGNNSSAASSGASKNSGGQVEG 340
>gi|356535559|ref|XP_003536312.1| PREDICTED: CUGBP Elav-like family member 1-B-like [Glycine max]
Length = 429
Score = 512 bits (1319), Expect = e-143, Method: Compositional matrix adjust.
Identities = 250/314 (79%), Positives = 273/314 (86%), Gaps = 6/314 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
MAE K+E K SEE VKLFVGQVPK M E ++LAMFKEFALVDEVNII+DK +RASRGCCF
Sbjct: 2 MAEGKEESKFSEESVKLFVGQVPKRMAEDEVLAMFKEFALVDEVNIIRDKASRASRGCCF 61
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
VICPSR+EADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN+SE EVS
Sbjct: 62 VICPSREEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNISEDEVS 121
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LFS+YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKH MEGSSVPLVVKW
Sbjct: 122 DLFSMYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHTMEGSSVPLVVKW 181
Query: 181 ADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQY 240
ADTEKER ARRAQKAQSQ +N+P AD QHPSLFGALPMGY PPYNGYGYQA G YGLM Y
Sbjct: 182 ADTEKERLARRAQKAQSQVSNMPQADPQHPSLFGALPMGYVPPYNGYGYQAPGGYGLMAY 241
Query: 241 RLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQY 300
R PPMQNQPGFH + +NQ NA+R PDL ++ PRNY PP+ ++G YPAVPG+Q+
Sbjct: 242 RFPPMQNQPGFHNM--NMNQVNAVR---PDLGHSVNPRNYHAPPASYIGP-YPAVPGVQH 295
Query: 301 PMPYPGGMLGHRPL 314
PM YP ++ RP+
Sbjct: 296 PMVYPRRIVSPRPM 309
>gi|356500250|ref|XP_003518946.1| PREDICTED: CUGBP Elav-like family member 1-like [Glycine max]
Length = 426
Score = 506 bits (1302), Expect = e-141, Method: Compositional matrix adjust.
Identities = 254/323 (78%), Positives = 278/323 (86%), Gaps = 8/323 (2%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
MAE K+E KSSEE VKLFVGQVPK M+E ++LAMFKE ALVDEVNII+DK TRASRGCCF
Sbjct: 1 MAEGKEESKSSEESVKLFVGQVPKRMSEDEVLAMFKELALVDEVNIIRDKATRASRGCCF 60
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
VICPSR+EADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN+SE EVS
Sbjct: 61 VICPSREEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNISEDEVS 120
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LFS YGTIKDLQILRGSQ TSKGCAFLKYETKEQA ALEAINGKH MEGSSVPLVVKW
Sbjct: 121 NLFSKYGTIKDLQILRGSQHTSKGCAFLKYETKEQAFTALEAINGKHTMEGSSVPLVVKW 180
Query: 181 ADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQY 240
ADTEKER ARRAQK QS+ +N P+AD QHPSLFGALPMGY PPYNGYGYQA G YGLM Y
Sbjct: 181 ADTEKERLARRAQKTQSRVSNAPHADPQHPSLFGALPMGYVPPYNGYGYQAPGGYGLMPY 240
Query: 241 RLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQY 300
R PP+QNQPGFH + NQ NA+R PDL +M PRNY PP+ ++GS YPAVPG+Q+
Sbjct: 241 RFPPVQNQPGFHNM----NQANAVR---PDLGHSMNPRNYPAPPASYIGS-YPAVPGIQH 292
Query: 301 PMPYPGGMLGHRPLNNSPGSVSP 323
PM YP G++ RP+++ PGSVSP
Sbjct: 293 PMVYPRGIVSPRPMSSCPGSVSP 315
>gi|224068763|ref|XP_002302819.1| predicted protein [Populus trichocarpa]
gi|222844545|gb|EEE82092.1| predicted protein [Populus trichocarpa]
Length = 396
Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust.
Identities = 246/316 (77%), Positives = 266/316 (84%), Gaps = 25/316 (7%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVGQVPKHMTE ++LAMFKEFALVDEVNIIKDKTTRASRGCCF+ICPSRQEADKAVN
Sbjct: 19 VKLFVGQVPKHMTEDEVLAMFKEFALVDEVNIIKDKTTRASRGCCFLICPSRQEADKAVN 78
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
ACHNKKTLPGASSPLQVKYADGELERLEHKLF+GMLPKNVSEAE+S LFS YG IKDLQI
Sbjct: 79 ACHNKKTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSEAELSDLFSKYGIIKDLQI 138
Query: 135 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
LRGSQQTSKGCAFLKYETKEQA AALE INGKHKMEGSSVPLVVKWADTEKERQARRAQK
Sbjct: 139 LRGSQQTSKGCAFLKYETKEQAHAALEDINGKHKMEGSSVPLVVKWADTEKERQARRAQK 198
Query: 195 AQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGI 254
AQSQA +PN DSQHPSLFGALPMGYAPPYNGYGYQA G+Y L+ YRL
Sbjct: 199 AQSQA--MPNTDSQHPSLFGALPMGYAPPYNGYGYQAPGAYELVPYRL------------ 244
Query: 255 IPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPL 314
G PDLS N+ PRNYA P+G++GS YP +PGLQYP+ YPG ++ HRPL
Sbjct: 245 ---------RGGIRPDLSLNISPRNYA--PAGYMGSAYPTMPGLQYPIAYPGAIMSHRPL 293
Query: 315 NNSPGSVSPAVANSNP 330
+NSPG++SP V + P
Sbjct: 294 SNSPGTLSPTVPSCPP 309
>gi|115442121|ref|NP_001045340.1| Os01g0938200 [Oryza sativa Japonica Group]
gi|20160777|dbj|BAB89718.1| putative ribonucleoprotein [Oryza sativa Japonica Group]
gi|20161317|dbj|BAB90241.1| putative ribonucleoprotein [Oryza sativa Japonica Group]
gi|113534871|dbj|BAF07254.1| Os01g0938200 [Oryza sativa Japonica Group]
gi|215704529|dbj|BAG94162.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189701|gb|EEC72128.1| hypothetical protein OsI_05123 [Oryza sativa Indica Group]
gi|222619840|gb|EEE55972.1| hypothetical protein OsJ_04706 [Oryza sativa Japonica Group]
Length = 460
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 236/335 (70%), Positives = 275/335 (82%), Gaps = 7/335 (2%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVGQVPKHMTEA+LLAMF+E A+VDEV +IKDK T+ASRGCCF+ICPSR+EADKAVN
Sbjct: 40 VKLFVGQVPKHMTEAELLAMFQEVAIVDEVTVIKDKATKASRGCCFLICPSREEADKAVN 99
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
A HNK TLPGASSPLQVKYADGELERLEHKLFIGMLPKNV++ E++ LFS YG IKDLQI
Sbjct: 100 AYHNKHTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVTDTELTDLFSKYGNIKDLQI 159
Query: 135 LRGSQQTSK-GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQ 193
LRGSQQTSK GCAFLKYETKEQA+AA+EA+NGKHK+EGSSVPLVVKWADTEKERQAR+AQ
Sbjct: 160 LRGSQQTSKAGCAFLKYETKEQAVAAIEALNGKHKIEGSSVPLVVKWADTEKERQARKAQ 219
Query: 194 KAQSQANNLPNAD-SQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFH 252
KAQ Q++N+P+A Q SLFGAL MGY P YNG+GYQ G+YGLMQY L PMQNQ F
Sbjct: 220 KAQLQSSNMPSASPMQQSSLFGALQMGYMPQYNGFGYQPPGTYGLMQYPLSPMQNQATFP 279
Query: 253 GIIPPVNQGNAMRGASPDLSSNMGPRNY-AMPPSGFVGSGYPAVPGLQYPMPYPGGMLGH 311
++ PVNQGN++RG +P+LS N PR++ AM + S YP VPG+QY YPGG++ +
Sbjct: 280 NMVQPVNQGNSIRGVNPELSPNSVPRSFNAMQ----LSSPYPPVPGVQYAGSYPGGLMNN 335
Query: 312 RPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEG 346
RP NS S+ + N+N SSS + GGQIEG
Sbjct: 336 RPFGNSFSSIKVPIVNANSPASSSPSSNPGGQIEG 370
>gi|297809825|ref|XP_002872796.1| hypothetical protein ARALYDRAFT_490251 [Arabidopsis lyrata subsp.
lyrata]
gi|297318633|gb|EFH49055.1| hypothetical protein ARALYDRAFT_490251 [Arabidopsis lyrata subsp.
lyrata]
Length = 444
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 241/348 (69%), Positives = 281/348 (80%), Gaps = 12/348 (3%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVGQ+PKHM+E+QLL +F+EFA+VDEVNIIKDK TRASRGCCF++CPSR+EADK VN
Sbjct: 18 VKLFVGQIPKHMSESQLLTLFQEFAVVDEVNIIKDKITRASRGCCFLLCPSREEADKLVN 77
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
ACHNKKTLPGASS LQVKYADGELERLEHKLF+GMLPKNVSEAEV +LFS YGTIKDLQI
Sbjct: 78 ACHNKKTLPGASSLLQVKYADGELERLEHKLFVGMLPKNVSEAEVQSLFSKYGTIKDLQI 137
Query: 135 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
LRG+QQTSKGCAFLKYETKEQA++A+E+INGKHKMEGS+VPLVVKWADTE+ER RR QK
Sbjct: 138 LRGAQQTSKGCAFLKYETKEQAVSAMESINGKHKMEGSTVPLVVKWADTERERHTRRLQK 197
Query: 195 AQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGY-QASGSYGLMQYRLPPMQNQPGFHG 253
AQS L NAD +PSLFGALPMGY PPYNGYGY Q G+YG Y LPP+QNQ F
Sbjct: 198 AQSHIARLSNADPTNPSLFGALPMGYVPPYNGYGYHQPPGTYG---YMLPPIQNQAAFPN 254
Query: 254 IIPPVNQG--NAMRGASPD-LSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLG 310
+I NQG NA++G SPD + + RN+ MPP+ ++GSGYPAV G +P YP G++
Sbjct: 255 MIAQPNQGNNNALQGTSPDSVPPRLARRNFPMPPANYMGSGYPAVRGHPFPFAYPRGIVS 314
Query: 311 HRPLNNSPGSVSPAVANSNPSTSSSG-GTGSGGQIEG----FLSIYSV 353
RPL++SPGS+SP +ANS ST+ G G S Q EG L IY++
Sbjct: 315 PRPLSSSPGSISPGIANSGMSTTPLGIGLSSVVQTEGPEGANLFIYNI 362
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E LF+ +P+ + +L A F+ F +V + DK T S+ FV S+ A A
Sbjct: 353 EGANLFIYNIPREFGDQELAAAFQSFGIVLSAKVFVDKATGVSKCFGFVSYDSQAAAQNA 412
Query: 73 VNACHNKKTLPGASSPLQVK 92
++ N + L G +Q+K
Sbjct: 413 IDVM-NGRHLGGKKLKVQLK 431
>gi|413951358|gb|AFW84007.1| hypothetical protein ZEAMMB73_397161 [Zea mays]
Length = 455
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/336 (67%), Positives = 274/336 (81%), Gaps = 8/336 (2%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVGQVPKHM EA LLA+F+E A VDEV +IKDK T+ SRGCCFVICPSR+EADKAVN
Sbjct: 32 VKLFVGQVPKHMAEADLLALFREVAAVDEVTVIKDKATKVSRGCCFVICPSREEADKAVN 91
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
A HNK+TL GASSPLQVKYADGELERLEHKLFIGMLPKNV++ E++ LFS YG + DLQI
Sbjct: 92 AYHNKQTLSGASSPLQVKYADGELERLEHKLFIGMLPKNVTDTELTDLFSKYGNVTDLQI 151
Query: 135 LRGSQQTSK-GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQ 193
LRGSQQT+K GCAF+KY+TK+QALAA+EA+NGKHK+EGSSVPLVVKWADTEKERQAR+AQ
Sbjct: 152 LRGSQQTNKAGCAFIKYQTKDQALAAIEALNGKHKIEGSSVPLVVKWADTEKERQARKAQ 211
Query: 194 KAQSQANNLPNAD--SQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGF 251
KAQSQ +++PNA QH S+FGAL MGY P YNG+GYQ G+YGLMQY L PMQNQ F
Sbjct: 212 KAQSQLSHIPNASPMQQHSSVFGALQMGYMPQYNGFGYQPPGTYGLMQYPLSPMQNQGPF 271
Query: 252 HGIIPPVNQGNAMRGASPDLSSNMGPRNY-AMPPSGFVGSGYPAVPGLQYPMPYPGGMLG 310
++ P+NQGN++RG +P++S + R++ AM +GS YPA+PG+QYP YPGG +G
Sbjct: 272 QNMVQPLNQGNSIRGVNPEVSPSSVQRSFNAMQ----LGSPYPAMPGMQYPGSYPGGPMG 327
Query: 311 HRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEG 346
+R L NS + +N+N + SSS + +GGQ+EG
Sbjct: 328 NRHLGNSHNPIKAPNSNANSTVSSSPSSNAGGQVEG 363
>gi|30679366|ref|NP_849294.1| RNA-binding protein-defense related 1 [Arabidopsis thaliana]
gi|17529054|gb|AAL38737.1| putative ribonucleoprotein [Arabidopsis thaliana]
gi|332656873|gb|AEE82273.1| RNA-binding protein-defense related 1 [Arabidopsis thaliana]
Length = 439
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 217/303 (71%), Positives = 251/303 (82%), Gaps = 6/303 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVGQ+PKHM+E+QLL +F+EFA+VDEVNIIKDK TRASRGCCF++CPSR+EADK VN
Sbjct: 18 VKLFVGQIPKHMSESQLLTLFQEFAVVDEVNIIKDKITRASRGCCFLLCPSREEADKLVN 77
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
ACHNKKTLPGA+S LQVKYADGELERLEHKLF+GMLPKNVSEAEV +LFS YGTIKDLQI
Sbjct: 78 ACHNKKTLPGANSLLQVKYADGELERLEHKLFVGMLPKNVSEAEVQSLFSKYGTIKDLQI 137
Query: 135 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
LRG+QQTSKGCAFLKYETKEQA++A+E+INGKHKMEGS+VPLVVKWADTE+ER RR QK
Sbjct: 138 LRGAQQTSKGCAFLKYETKEQAVSAMESINGKHKMEGSTVPLVVKWADTERERHTRRLQK 197
Query: 195 AQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGI 254
AQS L N D +PSLFGALPMGY PPYNGYGY G+YG Y LPP+QNQ F +
Sbjct: 198 AQSHIARLGNGDPTNPSLFGALPMGYVPPYNGYGYHPPGTYG---YMLPPIQNQAAFSNM 254
Query: 255 IPPVNQG--NAMRGASPD-LSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGH 311
I NQG NA++G SPD + + RN+ MPP ++GSGYPA+ G +P YP G++
Sbjct: 255 IAQPNQGNNNALQGTSPDSVPPRLARRNFPMPPGNYMGSGYPAMRGHPFPFAYPRGIVSP 314
Query: 312 RPL 314
RPL
Sbjct: 315 RPL 317
>gi|3924594|gb|AAC79095.1| putative ribonucleoprotein [Arabidopsis thaliana]
gi|4262139|gb|AAD14439.1| putative ribonucleoprotein [Arabidopsis thaliana]
gi|7270181|emb|CAB77796.1| putative ribonucleoprotein [Arabidopsis thaliana]
Length = 492
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/304 (71%), Positives = 252/304 (82%), Gaps = 7/304 (2%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVGQ+PKHM+E+QLL +F+EFA+VDEVNIIKDK TRASRGCCF++CPSR+EADK VN
Sbjct: 18 VKLFVGQIPKHMSESQLLTLFQEFAVVDEVNIIKDKITRASRGCCFLLCPSREEADKLVN 77
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
ACHNKKTLPGA+S LQVKYADGELERLEHKLF+GMLPKNVSEAEV +LFS YGTIKDLQI
Sbjct: 78 ACHNKKTLPGANSLLQVKYADGELERLEHKLFVGMLPKNVSEAEVQSLFSKYGTIKDLQI 137
Query: 135 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
LRG+QQTSKGCAFLKYETKEQA++A+E+INGKHKMEGS+VPLVVKWADTE+ER RR QK
Sbjct: 138 LRGAQQTSKGCAFLKYETKEQAVSAMESINGKHKMEGSTVPLVVKWADTERERHTRRLQK 197
Query: 195 AQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGY-QASGSYGLMQYRLPPMQNQPGFHG 253
AQS L N D +PSLFGALPMGY PPYNGYGY Q G+YG Y LPP+QNQ F
Sbjct: 198 AQSHIARLGNGDPTNPSLFGALPMGYVPPYNGYGYHQPPGTYG---YMLPPIQNQAAFSN 254
Query: 254 IIPPVNQG--NAMRGASPD-LSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLG 310
+I NQG NA++G SPD + + RN+ MPP ++GSGYPA+ G +P YP G++
Sbjct: 255 MIAQPNQGNNNALQGTSPDSVPPRLARRNFPMPPGNYMGSGYPAMRGHPFPFAYPRGIVS 314
Query: 311 HRPL 314
RPL
Sbjct: 315 PRPL 318
Score = 38.1 bits (87), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E LF+ +P+ + +L A F+ F +V + DK T S+ FV S+ A A
Sbjct: 347 EGANLFIYNIPREFGDQELAAAFQSFGIVLSAKVFVDKATGVSKCFGFVSYDSQAAAQNA 406
Query: 73 VNACHNKKTLPGASSPLQVK 92
++ N + L G +Q+K
Sbjct: 407 IDMM-NGRHLGGKKLKVQLK 425
>gi|326528321|dbj|BAJ93342.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 467
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/338 (68%), Positives = 273/338 (80%), Gaps = 5/338 (1%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
E VKLFVGQVPK MTEA+L AMF++ A+VDEV +I+DK T+ASRGCCF+ICPSR+EAD
Sbjct: 43 DESSVKLFVGQVPKLMTEAELAAMFRDVAIVDEVTVIRDKATKASRGCCFLICPSREEAD 102
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KAVNA HNK+TLPGA SPLQVKYADGELERLEHKLFIGMLPKNV++ E++ LFS YG IK
Sbjct: 103 KAVNAYHNKRTLPGAPSPLQVKYADGELERLEHKLFIGMLPKNVTDVEMTDLFSQYGNIK 162
Query: 131 DLQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
DLQILRGSQQTSK GCAFLKYETKEQA+AA+EA+NGKHK+EGSSVPLVVKWADTEKERQA
Sbjct: 163 DLQILRGSQQTSKAGCAFLKYETKEQAVAAIEALNGKHKIEGSSVPLVVKWADTEKERQA 222
Query: 190 RRAQKAQSQANNLPNADS-QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQ 248
R+AQKAQ +N+ NA++ Q SLFGAL MGY PPYNG+GYQ G+YGLMQY L PMQNQ
Sbjct: 223 RKAQKAQYPPSNMSNANAMQQSSLFGALQMGYVPPYNGFGYQPQGTYGLMQYPLSPMQNQ 282
Query: 249 PGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGM 308
GF ++ PVNQG+++RG S +LS N R++ S +GS YPA PG+QYP YPGG
Sbjct: 283 AGFQNMVQPVNQGSSIRGVSSELSPNSVARSFN---SMQLGSPYPAGPGMQYPGSYPGGG 339
Query: 309 LGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEG 346
+ RP NS SV AN+ TSSS G+ +G Q+EG
Sbjct: 340 INSRPYMNSHNSVKVPNANATSPTSSSTGSNTGPQLEG 377
>gi|18412143|ref|NP_567249.1| RNA-binding protein-defense related 1 [Arabidopsis thaliana]
gi|21536899|gb|AAM61231.1| putative ribonucleoprotein [Arabidopsis thaliana]
gi|222423375|dbj|BAH19660.1| AT4G03110 [Arabidopsis thaliana]
gi|332656872|gb|AEE82272.1| RNA-binding protein-defense related 1 [Arabidopsis thaliana]
Length = 441
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/304 (71%), Positives = 252/304 (82%), Gaps = 7/304 (2%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVGQ+PKHM+E+QLL +F+EFA+VDEVNIIKDK TRASRGCCF++CPSR+EADK VN
Sbjct: 18 VKLFVGQIPKHMSESQLLTLFQEFAVVDEVNIIKDKITRASRGCCFLLCPSREEADKLVN 77
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
ACHNKKTLPGA+S LQVKYADGELERLEHKLF+GMLPKNVSEAEV +LFS YGTIKDLQI
Sbjct: 78 ACHNKKTLPGANSLLQVKYADGELERLEHKLFVGMLPKNVSEAEVQSLFSKYGTIKDLQI 137
Query: 135 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
LRG+QQTSKGCAFLKYETKEQA++A+E+INGKHKMEGS+VPLVVKWADTE+ER RR QK
Sbjct: 138 LRGAQQTSKGCAFLKYETKEQAVSAMESINGKHKMEGSTVPLVVKWADTERERHTRRLQK 197
Query: 195 AQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGY-QASGSYGLMQYRLPPMQNQPGFHG 253
AQS L N D +PSLFGALPMGY PPYNGYGY Q G+YG Y LPP+QNQ F
Sbjct: 198 AQSHIARLGNGDPTNPSLFGALPMGYVPPYNGYGYHQPPGTYG---YMLPPIQNQAAFSN 254
Query: 254 IIPPVNQG--NAMRGASPD-LSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLG 310
+I NQG NA++G SPD + + RN+ MPP ++GSGYPA+ G +P YP G++
Sbjct: 255 MIAQPNQGNNNALQGTSPDSVPPRLARRNFPMPPGNYMGSGYPAMRGHPFPFAYPRGIVS 314
Query: 311 HRPL 314
RPL
Sbjct: 315 PRPL 318
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E LF+ +P+ + +L A F+ F +V + DK T S+ FV S+ A A
Sbjct: 347 EGANLFIYNIPREFGDQELAAAFQSFGIVLSAKVFVDKATGVSKCFGFVSYDSQAAAQNA 406
Query: 73 VNACHNKKTLPGASSPLQVK 92
++ N + L G +Q+K
Sbjct: 407 IDMM-NGRHLGGKKLKVQLK 425
>gi|357129324|ref|XP_003566314.1| PREDICTED: CUGBP Elav-like family member 2-like [Brachypodium
distachyon]
Length = 459
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 227/337 (67%), Positives = 267/337 (79%), Gaps = 5/337 (1%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
E VKLFVGQVPK MTEA+L AMF++ A+VDEV +I+DK T+ SRGCCF+ICPSR+EADK
Sbjct: 36 ESSVKLFVGQVPKQMTEAELAAMFRDVAIVDEVTVIRDKATKVSRGCCFLICPSREEADK 95
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
AVNA HNK+TLPGA SPLQVKYADGELERLEHKLFIGMLPKNV++AE++ LFS YG IKD
Sbjct: 96 AVNAYHNKRTLPGAPSPLQVKYADGELERLEHKLFIGMLPKNVTDAEMTDLFSQYGNIKD 155
Query: 132 LQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
LQILRGSQQTSK GCAFLKYETKEQA+AA+EA+NGKHK+EGSSVPLVVKWADTEKERQAR
Sbjct: 156 LQILRGSQQTSKAGCAFLKYETKEQAMAAIEALNGKHKIEGSSVPLVVKWADTEKERQAR 215
Query: 191 RAQKAQSQANNLPNADS-QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQP 249
+AQKA Q +N+ NA + Q SLFGAL MGY P YNG+GYQ G+YGLMQY L PMQNQ
Sbjct: 216 KAQKAHFQPSNMSNATAMQQNSLFGALQMGYMPQYNGFGYQPQGTYGLMQYPLSPMQNQA 275
Query: 250 GFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGML 309
F ++ PVNQG+++RG + +LS N R++ S +GS YPA PG+QYP YPGG +
Sbjct: 276 AFQNMVQPVNQGSSIRGVNSELSPNSVTRSFN---SMQLGSPYPAAPGMQYPGSYPGGAI 332
Query: 310 GHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEG 346
RP NS ++ N+ TSSS + G QIEG
Sbjct: 333 NSRPYMNSHNAIKVPNTNATSPTSSSTSSNPGPQIEG 369
>gi|226492020|ref|NP_001152526.1| LOC100286166 [Zea mays]
gi|195657131|gb|ACG48033.1| RNA binding protein [Zea mays]
Length = 463
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 226/346 (65%), Positives = 275/346 (79%), Gaps = 18/346 (5%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVGQVPKHM EA LLA+F+E A VDEV +IKDK T+ SRGCCFVICPSR+EADKAVN
Sbjct: 30 VKLFVGQVPKHMAEADLLALFREVAAVDEVTVIKDKATKVSRGCCFVICPSREEADKAVN 89
Query: 75 ACHNKKTLPG----------ASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFS 124
A HNK+TL G ASSPLQVKYADGELERLEHKLFIGMLPKNV++ E++ LFS
Sbjct: 90 AYHNKQTLSGVCEHTTNLVLASSPLQVKYADGELERLEHKLFIGMLPKNVTDTELTDLFS 149
Query: 125 IYGTIKDLQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADT 183
YG + DLQILRGSQQT+K GCAF+KY+TK+QALAA+EA+NGKHK+EGSSVPLVVKWADT
Sbjct: 150 KYGNVTDLQILRGSQQTNKAGCAFIKYQTKDQALAAIEALNGKHKIEGSSVPLVVKWADT 209
Query: 184 EKERQARRAQKAQSQANNLPNAD--SQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYR 241
EKERQAR+AQKAQSQ +++PNA QH S+FGAL MGY P YNG+GYQ +G+YGLMQY
Sbjct: 210 EKERQARKAQKAQSQLSHIPNASPMQQHSSVFGALQMGYMPQYNGFGYQPTGTYGLMQYP 269
Query: 242 LPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNY-AMPPSGFVGSGYPAVPGLQY 300
L PMQNQ F ++ P+NQGN++RG +P++S + R++ AM +GS YPA+PG+QY
Sbjct: 270 LSPMQNQGPFQNMVQPLNQGNSIRGVNPEVSPSSVQRSFNAMQ----LGSPYPAMPGMQY 325
Query: 301 PMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEG 346
P YPGG +G+R L NS + +N+N + SSS + +GGQ+EG
Sbjct: 326 PGSYPGGPMGNRHLGNSHNPIKVPNSNANSTVSSSPSSNAGGQVEG 371
>gi|326489549|dbj|BAK01755.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 453
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/354 (64%), Positives = 269/354 (75%), Gaps = 12/354 (3%)
Query: 8 KKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQ 67
++ E+ VKLFVGQVPKHMTEA+L AMFK+ A+VDEV +IKDK T+ASRGCCFVICPSR
Sbjct: 24 REREEQSVKLFVGQVPKHMTEAELAAMFKDVAVVDEVTLIKDKATKASRGCCFVICPSRD 83
Query: 68 EADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYG 127
EADKAVNA HNK TLPGA+SPLQVKYADGELERLEHKLFIGMLPKNV++ E++ LFS YG
Sbjct: 84 EADKAVNAYHNKHTLPGAASPLQVKYADGELERLEHKLFIGMLPKNVADTELTDLFSKYG 143
Query: 128 TIKDLQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 186
IKDLQILRGSQQTSK GCAF+KYE KEQA+AA+E +NGKHK+EGSSVPLVVKWADTEKE
Sbjct: 144 NIKDLQILRGSQQTSKAGCAFIKYEMKEQAVAAIEDLNGKHKIEGSSVPLVVKWADTEKE 203
Query: 187 RQARRAQKAQSQANNLPNADSQ-HPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPM 245
RQAR+AQKAQ Q+ N+PN S+FGAL MGY P YNG+ YQ G+YGLMQY L PM
Sbjct: 204 RQARKAQKAQLQSPNMPNGRPMPQSSVFGALQMGYMPQYNGFSYQPPGTYGLMQYPLSPM 263
Query: 246 QNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYP 305
QNQ F + PVNQGN++RG +P+LS N GPR++ +GS YPAVPG+QY YP
Sbjct: 264 QNQGPFQNMGQPVNQGNSIRGVNPELSPNSGPRSFN---PMHLGSPYPAVPGMQYQGSYP 320
Query: 306 GGMLGHRPLNN------SPGSVSPAVANSNPSTSSSGGTGSGGQIEGFLSIYSV 353
GG + RP N PG +VA S P ++ G T + G L IY +
Sbjct: 321 GGPMNSRPFGNPHNPLKVPGVNVNSVAFS-PRSNGGGQTQTEGPPGANLFIYHI 373
>gi|242087741|ref|XP_002439703.1| hypothetical protein SORBIDRAFT_09g018610 [Sorghum bicolor]
gi|241944988|gb|EES18133.1| hypothetical protein SORBIDRAFT_09g018610 [Sorghum bicolor]
Length = 455
Score = 439 bits (1130), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/314 (69%), Positives = 258/314 (82%), Gaps = 6/314 (1%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
S E VKLFVGQVPK M+EA+L A+F+ ALVDEV +I+D+ TR SRGCCFVICPSR+EAD
Sbjct: 31 SRESVKLFVGQVPKQMSEAELAALFRGVALVDEVTVIRDRATRVSRGCCFVICPSREEAD 90
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KAV A HNK+TLPGASSPLQVKYADGELERLEHKLF+GMLPKNV++AE++ LFS YG IK
Sbjct: 91 KAVTAYHNKRTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVTDAEMTDLFSKYGNIK 150
Query: 131 DLQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
DLQILRGSQQTSK GCAFLKYETKEQA+AA+EA+NG HK+EGSSVPLVVKWADTEKERQA
Sbjct: 151 DLQILRGSQQTSKAGCAFLKYETKEQAVAAIEALNGTHKIEGSSVPLVVKWADTEKERQA 210
Query: 190 RRAQKAQSQANNLPNADS-QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQY-RLPPMQN 247
R+AQKAQ Q++N+ N ++ Q S+FGAL MGY P YNG+GYQ G+YGLMQY L P+QN
Sbjct: 211 RKAQKAQFQSSNMLNPNAMQQNSVFGALQMGYVPQYNGFGYQPQGTYGLMQYPPLSPVQN 270
Query: 248 QPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGG 307
Q F ++ PVNQG+++RGA+ +LS N PR++ S +GS Y +PGLQYP YPGG
Sbjct: 271 QTAFQNMVQPVNQGSSIRGANSELSPNSVPRSFN---SAQLGSPYSPLPGLQYPGVYPGG 327
Query: 308 MLGHRPLNNSPGSV 321
+ HRP +NS S
Sbjct: 328 PINHRPFSNSHSST 341
>gi|413944942|gb|AFW77591.1| hypothetical protein ZEAMMB73_325553 [Zea mays]
Length = 456
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/314 (68%), Positives = 255/314 (81%), Gaps = 6/314 (1%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
S E VKLFVGQVPK M+EA+L AMF+ ALVDEV +I+D+ TR SRGCCFVICPSR+EAD
Sbjct: 32 SRESVKLFVGQVPKQMSEAELAAMFRSVALVDEVTVIRDRVTRVSRGCCFVICPSREEAD 91
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KAV HNK+TLPGASSPLQVKYADGELERLEHKLF+GMLPKNV+ AE++ LFS YG IK
Sbjct: 92 KAVTTYHNKRTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVTHAEMTDLFSKYGNIK 151
Query: 131 DLQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
DLQILRGSQQTSK GCAFLKYETKEQA+AA+EA+NG HK+EGSSVPLVVKWADTEKERQA
Sbjct: 152 DLQILRGSQQTSKAGCAFLKYETKEQAVAAIEALNGTHKIEGSSVPLVVKWADTEKERQA 211
Query: 190 RRAQKAQSQANNLPNADS-QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQY-RLPPMQN 247
R+AQKAQ Q++N+ NA++ Q S+FG L MGY P YNG+GYQ G+YGLMQY L P+QN
Sbjct: 212 RKAQKAQFQSSNMLNANAMQQNSVFGGLQMGYVPQYNGFGYQPQGTYGLMQYPPLSPVQN 271
Query: 248 QPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGG 307
Q F ++ PVNQG+++ GA+ ++S N PR++ S +GS Y +PGLQYP YPGG
Sbjct: 272 QAAFQNMVQPVNQGSSIHGANSEVSPNPVPRSFN---SAQLGSPYSPLPGLQYPGVYPGG 328
Query: 308 MLGHRPLNNSPGSV 321
+ HRP ++S S
Sbjct: 329 PINHRPFSSSHSST 342
>gi|413944941|gb|AFW77590.1| hypothetical protein ZEAMMB73_325553 [Zea mays]
Length = 435
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 214/314 (68%), Positives = 255/314 (81%), Gaps = 6/314 (1%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
S E VKLFVGQVPK M+EA+L AMF+ ALVDEV +I+D+ TR SRGCCFVICPSR+EAD
Sbjct: 32 SRESVKLFVGQVPKQMSEAELAAMFRSVALVDEVTVIRDRVTRVSRGCCFVICPSREEAD 91
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KAV HNK+TLPGASSPLQVKYADGELERLEHKLF+GMLPKNV+ AE++ LFS YG IK
Sbjct: 92 KAVTTYHNKRTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVTHAEMTDLFSKYGNIK 151
Query: 131 DLQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
DLQILRGSQQTSK GCAFLKYETKEQA+AA+EA+NG HK+EGSSVPLVVKWADTEKERQA
Sbjct: 152 DLQILRGSQQTSKAGCAFLKYETKEQAVAAIEALNGTHKIEGSSVPLVVKWADTEKERQA 211
Query: 190 RRAQKAQSQANNLPNADS-QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQY-RLPPMQN 247
R+AQKAQ Q++N+ NA++ Q S+FG L MGY P YNG+GYQ G+YGLMQY L P+QN
Sbjct: 212 RKAQKAQFQSSNMLNANAMQQNSVFGGLQMGYVPQYNGFGYQPQGTYGLMQYPPLSPVQN 271
Query: 248 QPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGG 307
Q F ++ PVNQG+++ GA+ ++S N PR++ S +GS Y +PGLQYP YPGG
Sbjct: 272 QAAFQNMVQPVNQGSSIHGANSEVSPNPVPRSFN---SAQLGSPYSPLPGLQYPGVYPGG 328
Query: 308 MLGHRPLNNSPGSV 321
+ HRP ++S S
Sbjct: 329 PINHRPFSSSHSST 342
>gi|357126722|ref|XP_003565036.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 1
[Brachypodium distachyon]
Length = 450
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/347 (65%), Positives = 263/347 (75%), Gaps = 14/347 (4%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVGQVPKHMTE +LLAMF+E A VDEV +IKDK TRASRGCCF+ICPSR EADKA+NA
Sbjct: 30 KLFVGQVPKHMTEPELLAMFREVAAVDEVTVIKDKATRASRGCCFLICPSRDEADKAINA 89
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQIL 135
HNK TLPGASSPLQVKYADGELERLEHKLFIGMLPKNV + E++ LFS YG IKDLQIL
Sbjct: 90 YHNKHTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVEDTELTDLFSEYGNIKDLQIL 149
Query: 136 RGSQQTSK-GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
RGSQQTSK GCAFLKYETKEQA+AA+EA+NGKHK+EGSSVPLVVKWADTEKERQAR+AQK
Sbjct: 150 RGSQQTSKAGCAFLKYETKEQAVAAIEALNGKHKIEGSSVPLVVKWADTEKERQARKAQK 209
Query: 195 AQSQANNLPNADSQ-HPSLFGALPMGYAP-PYNGYGYQASGSYGLMQYRLPPMQNQPGFH 252
AQ + N+PN S+FGAL MGY P YNG+ YQ G+YGLMQY L PMQNQ F
Sbjct: 210 AQLPSPNMPNGGPMPQSSVFGALQMGYLPHQYNGFSYQPPGTYGLMQYPLSPMQNQAAFQ 269
Query: 253 GIIPPVNQGNAMRGASPDLSSNMGPRNY-AMPPSGFVGSGYPAVPGLQYPMPYPGGMLGH 311
++ P NQGN++RG +P+LS N R++ AM +GS YP VPG+QY YPGG + +
Sbjct: 270 NMVQP-NQGNSIRGVNPELSPNAVSRSFNAM----HLGSPYPGVPGMQYTGSYPGGPMSN 324
Query: 312 RPLNNSPGSVSPAVANSN-----PSTSSSGGTGSGGQIEGFLSIYSV 353
RP NS + AN N PS++ G T + G L IY +
Sbjct: 325 RPFGNSHNPLKVPSANVNSIAYSPSSNGGGQTQTEGPPGANLFIYHI 371
>gi|218196669|gb|EEC79096.1| hypothetical protein OsI_19721 [Oryza sativa Indica Group]
Length = 555
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/337 (67%), Positives = 266/337 (78%), Gaps = 5/337 (1%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
EE VKLFVGQVPK MTE +L AMF A+VDEV +I+DK T+ASRGCCF+ICPSR+EADK
Sbjct: 43 EESVKLFVGQVPKQMTEDELAAMFAAVAVVDEVTLIRDKATKASRGCCFLICPSREEADK 102
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
AVNA HNK+TLPGASSPLQVKYADGELERLEHKLFIGMLPKNV++AE++ LFS YG IKD
Sbjct: 103 AVNAYHNKRTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVTDAEMTDLFSQYGNIKD 162
Query: 132 LQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
LQILRGSQQTSK GCAFLKYETKEQALAA+EA+NGKHK+EGSSVPLVVKWADTEKERQAR
Sbjct: 163 LQILRGSQQTSKAGCAFLKYETKEQALAAIEALNGKHKIEGSSVPLVVKWADTEKERQAR 222
Query: 191 RAQKAQSQANNLPNADS-QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQP 249
+AQKAQ +N+ N ++ Q SLFGA+ MGY P YNGYGYQ G+YGLMQY L PMQNQ
Sbjct: 223 KAQKAQFHPSNMSNPNAMQQSSLFGAMQMGYVPQYNGYGYQPQGTYGLMQYPLSPMQNQA 282
Query: 250 GFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGML 309
F ++ VNQG+++RG + +LS N PR++ S +GS Y VP +QYP YPG +
Sbjct: 283 AFPNMVQSVNQGSSIRGVNSELSPNSAPRSFN---SMQLGSPYSPVPSMQYPGSYPGNAI 339
Query: 310 GHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEG 346
RP NS S+ AN++ TSSS + G QIEG
Sbjct: 340 NSRPFVNSHNSMKVPNANASSPTSSSTSSNPGPQIEG 376
>gi|297604406|ref|NP_001055367.2| Os05g0373400 [Oryza sativa Japonica Group]
gi|215707181|dbj|BAG93641.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255676313|dbj|BAF17281.2| Os05g0373400 [Oryza sativa Japonica Group]
Length = 466
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/337 (67%), Positives = 266/337 (78%), Gaps = 5/337 (1%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
EE VKLFVGQVPK MTE +L AMF A+VDEV +I+DK T+ASRGCCF+ICPSR+EADK
Sbjct: 43 EESVKLFVGQVPKQMTEDELAAMFAAVAVVDEVTLIRDKATKASRGCCFLICPSREEADK 102
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
AVNA HNK+TLPGASSPLQVKYADGELERLEHKLFIGMLPKNV++AE++ LFS YG IKD
Sbjct: 103 AVNAYHNKRTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVTDAEMTDLFSQYGNIKD 162
Query: 132 LQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
LQILRGSQQTSK GCAFLKYETKEQALAA+EA+NGKHK+EGSSVPLVVKWADTEKERQAR
Sbjct: 163 LQILRGSQQTSKAGCAFLKYETKEQALAAIEALNGKHKIEGSSVPLVVKWADTEKERQAR 222
Query: 191 RAQKAQSQANNLPNADS-QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQP 249
+AQKAQ +N+ N ++ Q SLFGA+ MGY P YNGYGYQ G+YGLMQY L PMQNQ
Sbjct: 223 KAQKAQFHPSNMSNPNAMQQSSLFGAMQMGYVPQYNGYGYQPQGTYGLMQYPLSPMQNQA 282
Query: 250 GFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGML 309
F ++ VNQG+++RG + +LS N PR++ S +GS Y VP +QYP YPG +
Sbjct: 283 AFPNMVQSVNQGSSIRGVNSELSPNSAPRSFN---SMQLGSPYSPVPSMQYPGSYPGNAI 339
Query: 310 GHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEG 346
RP NS S+ AN++ TSSS + G QIEG
Sbjct: 340 NSRPFVNSHNSMKVPNANASSPTSSSTSSNPGPQIEG 376
>gi|357126724|ref|XP_003565037.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 2
[Brachypodium distachyon]
Length = 459
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/356 (64%), Positives = 263/356 (73%), Gaps = 23/356 (6%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVGQVPKHMTE +LLAMF+E A VDEV +IKDK TRASRGCCF+ICPSR EADKA+NA
Sbjct: 30 KLFVGQVPKHMTEPELLAMFREVAAVDEVTVIKDKATRASRGCCFLICPSRDEADKAINA 89
Query: 76 CHNKKTLPG---------ASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
HNK TLPG ASSPLQVKYADGELERLEHKLFIGMLPKNV + E++ LFS Y
Sbjct: 90 YHNKHTLPGVCEHSSLVLASSPLQVKYADGELERLEHKLFIGMLPKNVEDTELTDLFSEY 149
Query: 127 GTIKDLQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
G IKDLQILRGSQQTSK GCAFLKYETKEQA+AA+EA+NGKHK+EGSSVPLVVKWADTEK
Sbjct: 150 GNIKDLQILRGSQQTSKAGCAFLKYETKEQAVAAIEALNGKHKIEGSSVPLVVKWADTEK 209
Query: 186 ERQARRAQKAQSQANNLPNADSQ-HPSLFGALPMGYAP-PYNGYGYQASGSYGLMQYRLP 243
ERQAR+AQKAQ + N+PN S+FGAL MGY P YNG+ YQ G+YGLMQY L
Sbjct: 210 ERQARKAQKAQLPSPNMPNGGPMPQSSVFGALQMGYLPHQYNGFSYQPPGTYGLMQYPLS 269
Query: 244 PMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNY-AMPPSGFVGSGYPAVPGLQYPM 302
PMQNQ F ++ P NQGN++RG +P+LS N R++ AM +GS YP VPG+QY
Sbjct: 270 PMQNQAAFQNMVQP-NQGNSIRGVNPELSPNAVSRSFNAM----HLGSPYPGVPGMQYTG 324
Query: 303 PYPGGMLGHRPLNNSPGSVSPAVANSN-----PSTSSSGGTGSGGQIEGFLSIYSV 353
YPGG + +RP NS + AN N PS++ G T + G L IY +
Sbjct: 325 SYPGGPMSNRPFGNSHNPLKVPSANVNSIAYSPSSNGGGQTQTEGPPGANLFIYHI 380
>gi|22329313|ref|NP_171845.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|26449591|dbj|BAC41921.1| putative ribonucleoprotein [Arabidopsis thaliana]
gi|28950997|gb|AAO63422.1| At1g03457 [Arabidopsis thaliana]
gi|332189452|gb|AEE27573.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 429
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/341 (63%), Positives = 256/341 (75%), Gaps = 26/341 (7%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
MAE E +EERVKLFVGQVPKHMTE QLL +F+EF++V+EVNIIK+KTTRA RGCCF
Sbjct: 1 MAEETME---NEERVKLFVGQVPKHMTEIQLLTLFREFSIVNEVNIIKEKTTRAPRGCCF 57
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
+ CP+R++ADK +N+ HNKKTLPGASSPLQVKYADGELERLEHKLF+GMLPKNVSE EV
Sbjct: 58 LTCPTREDADKVINSFHNKKTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSETEVQ 117
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
+LFS YGTIKDLQILRGS QTSKGC FLKYE+KEQA+AA+EA+NG+H MEG++VPL+VKW
Sbjct: 118 SLFSEYGTIKDLQILRGSLQTSKGCLFLKYESKEQAVAAMEALNGRHIMEGANVPLIVKW 177
Query: 181 ADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQY 240
ADTEKERQARR K QS + L D Q+PS+FGALPM Y PPYNGYGY G+YG Y
Sbjct: 178 ADTEKERQARRLLKVQSHVSRL---DPQNPSMFGALPMSYVPPYNGYGYHVPGTYG---Y 231
Query: 241 RLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGP-----RNYAMPPSGFVGSGYPAV 295
LPP+Q Q FH +I P NQGN L+ ++ P RN+ P+ GY
Sbjct: 232 MLPPIQTQHAFHNVISP-NQGNGRALQGTALTESVPPRLAPRRNF---PTALGNYGY--- 284
Query: 296 PGLQYPMPYPGGMLGHR-PLNNSPGSVSPAVANSNPSTSSS 335
GLQYPM +P GM+ R PL +VSP ++N+ S SS
Sbjct: 285 HGLQYPMAFPRGMIPPRLPLT----TVSPGISNNGTSIPSS 321
>gi|413948822|gb|AFW81471.1| hypothetical protein ZEAMMB73_420516 [Zea mays]
Length = 486
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/354 (60%), Positives = 259/354 (73%), Gaps = 38/354 (10%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
S E VKLFVGQVPK M+EA+L+AMF+ ALVDEV +I+D+ TR SRGCCF+ICPSR+EAD
Sbjct: 30 SRESVKLFVGQVPKQMSEAELVAMFRGVALVDEVTVIRDRATRVSRGCCFLICPSREEAD 89
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KAV A HNK+TLPGASSPLQVKYADGELERLEHKLF+GMLPKNV++AE+ LFS YG IK
Sbjct: 90 KAVTAYHNKRTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVTDAEMIDLFSKYGNIK 149
Query: 131 DLQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKHKME------------------- 170
DLQILRGSQQTSK GCAFLKYETKEQA+AA+EA+NG HK+E
Sbjct: 150 DLQILRGSQQTSKAGCAFLKYETKEQAVAAIEALNGTHKIEFRMKDAYRDCNLQTSPISH 209
Query: 171 -------------GSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS-QHPSLFGAL 216
GSSVPLVVKWADTEKERQAR+AQK+ Q++N+ NA++ + S+FGAL
Sbjct: 210 TLDGTSSLHIIVLGSSVPLVVKWADTEKERQARKAQKSPFQSSNMLNANAMRQNSVFGAL 269
Query: 217 PMGYAPPYNGYGYQASGSYGLMQY-RLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNM 275
MGY P YNG+GYQ G+YGLMQY L P+QNQ F ++ P+NQ ++ RGA+ +L ++
Sbjct: 270 QMGYVPQYNGFGYQPQGTYGLMQYPPLSPVQNQAAFQNMVQPINQASSTRGANSELPPDL 329
Query: 276 GPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSN 329
PR++ S +GS Y +PGLQYP YPGG + HRP +NS S N+N
Sbjct: 330 VPRSFN---STQLGSPYSPLPGLQYPGVYPGGPINHRPFSNSHSSTKVQNLNAN 380
>gi|42571323|ref|NP_973752.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332189453|gb|AEE27574.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 438
Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/350 (61%), Positives = 256/350 (73%), Gaps = 35/350 (10%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
MAE E +EERVKLFVGQVPKHMTE QLL +F+EF++V+EVNIIK+KTTRA RGCCF
Sbjct: 1 MAEETME---NEERVKLFVGQVPKHMTEIQLLTLFREFSIVNEVNIIKEKTTRAPRGCCF 57
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL---------EHKLFIGMLP 111
+ CP+R++ADK +N+ HNKKTLPGASSPLQVKYADGELERL EHKLF+GMLP
Sbjct: 58 LTCPTREDADKVINSFHNKKTLPGASSPLQVKYADGELERLDVLDCSCNPEHKLFVGMLP 117
Query: 112 KNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEG 171
KNVSE EV +LFS YGTIKDLQILRGS QTSKGC FLKYE+KEQA+AA+EA+NG+H MEG
Sbjct: 118 KNVSETEVQSLFSEYGTIKDLQILRGSLQTSKGCLFLKYESKEQAVAAMEALNGRHIMEG 177
Query: 172 SSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQA 231
++VPL+VKWADTEKERQARR K QS + L D Q+PS+FGALPM Y PPYNGYGY
Sbjct: 178 ANVPLIVKWADTEKERQARRLLKVQSHVSRL---DPQNPSMFGALPMSYVPPYNGYGYHV 234
Query: 232 SGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGP-----RNYAMPPSG 286
G+YG Y LPP+Q Q FH +I P NQGN L+ ++ P RN+ P+
Sbjct: 235 PGTYG---YMLPPIQTQHAFHNVISP-NQGNGRALQGTALTESVPPRLAPRRNF---PTA 287
Query: 287 FVGSGYPAVPGLQYPMPYPGGMLGHR-PLNNSPGSVSPAVANSNPSTSSS 335
GY GLQYPM +P GM+ R PL +VSP ++N+ S SS
Sbjct: 288 LGNYGY---HGLQYPMAFPRGMIPPRLPLT----TVSPGISNNGTSIPSS 330
>gi|297848560|ref|XP_002892161.1| hypothetical protein ARALYDRAFT_470321 [Arabidopsis lyrata subsp.
lyrata]
gi|297338003|gb|EFH68420.1| hypothetical protein ARALYDRAFT_470321 [Arabidopsis lyrata subsp.
lyrata]
Length = 435
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/345 (62%), Positives = 248/345 (71%), Gaps = 27/345 (7%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
MAE E +EERVKLFVGQVPKHMTE QLL +F EF++VDEVNIIK+KTTR RGCCF
Sbjct: 1 MAEETME---NEERVKLFVGQVPKHMTEIQLLTLFSEFSIVDEVNIIKEKTTRVPRGCCF 57
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL---------EHKLFIGMLP 111
+ CPSR+EADK +N HNKKTLPGASSPLQVKYADGE ERL EHKLF+GMLP
Sbjct: 58 LTCPSREEADKVINGFHNKKTLPGASSPLQVKYADGERERLDVLDCSCNPEHKLFVGMLP 117
Query: 112 KNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEG 171
KNVSE EV +LFS YGTIKDLQILRGS QTSKGC FLKYE KEQA+ A+EA+NG+H MEG
Sbjct: 118 KNVSETEVQSLFSEYGTIKDLQILRGSLQTSKGCLFLKYEFKEQAVTAMEALNGRHIMEG 177
Query: 172 SSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQA 231
++VPL+VKWADTE+ERQARR QK QS + D Q+PS+FGALPM Y PPYNGYGY
Sbjct: 178 ANVPLIVKWADTERERQARRLQKVQSHVS---RPDPQNPSMFGALPMAYVPPYNGYGYHV 234
Query: 232 SGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMP--PSGFVG 289
G+YG Y LPP+Q QP FH +I P NQGN L+ ++ PR A P+
Sbjct: 235 PGTYG---YMLPPIQTQPAFHNVISP-NQGNGRALLGTALTESVPPRLAARRNFPTALGN 290
Query: 290 SGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSS 334
GY GLQYPM +P GM+ RP +VSP ++N+ S S
Sbjct: 291 YGY---HGLQYPMAFPRGMVPPRP---PLTTVSPGISNNGTSIPS 329
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 76
LF+ +P+ + +L A F+ F V + DK T S+ F+ S+ A A+N
Sbjct: 341 LFIYNIPREFGDQELAAAFQPFGKVLSAKVFVDKATGISKCFGFISYDSQAAAQNAINTM 400
Query: 77 HNKKTLPGASSPLQVKYADGELERLEHKLFIGML 110
N L G +Q+K +G+ ++ LF G+L
Sbjct: 401 -NGCQLSGKKLKVQLKRDNGQQQQSNKPLFNGLL 433
>gi|9280669|gb|AAF86538.1|AC002560_31 F21B7.8 [Arabidopsis thaliana]
Length = 440
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/340 (62%), Positives = 252/340 (74%), Gaps = 32/340 (9%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+EERVKLFVGQVPKHMTE QLL +F+EF++V+EVNIIK+KTTRA RGCCF+ CP+R++AD
Sbjct: 3 NEERVKLFVGQVPKHMTEIQLLTLFREFSIVNEVNIIKEKTTRAPRGCCFLTCPTREDAD 62
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL---------EHKLFIGMLPKNVSEAEVSA 121
K +N+ HNKKTLPGASSPLQVKYADGELERL EHKLF+GMLPKNVSE EV +
Sbjct: 63 KVINSFHNKKTLPGASSPLQVKYADGELERLDVLDCSCNPEHKLFVGMLPKNVSETEVQS 122
Query: 122 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
LFS YGTIKDLQILRGS QTSKGC FLKYE+KEQA+AA+EA+NG+H MEG++VPL+VKWA
Sbjct: 123 LFSEYGTIKDLQILRGSLQTSKGCLFLKYESKEQAVAAMEALNGRHIMEGANVPLIVKWA 182
Query: 182 DTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYR 241
DTEKERQARR K QS + L D Q+PS+FGALPM Y PPYNGYGY G+YG Y
Sbjct: 183 DTEKERQARRLLKVQSHVSRL---DPQNPSMFGALPMSYVPPYNGYGYHVPGTYG---YM 236
Query: 242 LPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGP-----RNYAMPPSGFVGSGYPAVP 296
LPP+Q Q FH +I P NQGN L+ ++ P RN+ P+ GY
Sbjct: 237 LPPIQTQHAFHNVISP-NQGNGRALQGTALTESVPPRLAPRRNF---PTALGNYGY---H 289
Query: 297 GLQYPMPYPGGMLGHR-PLNNSPGSVSPAVANSNPSTSSS 335
GLQYPM +P GM+ R PL +VSP ++N+ S SS
Sbjct: 290 GLQYPMAFPRGMIPPRLPLT----TVSPGISNNGTSIPSS 325
>gi|49328140|gb|AAT58838.1| unknown protein, contains RNA recognition motif,PF00076 [Oryza
sativa Japonica Group]
Length = 381
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/317 (63%), Positives = 240/317 (75%), Gaps = 8/317 (2%)
Query: 38 FALVDEVNIIKDKTTRAS---RGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYA 94
F ++D++ D R + GCCF+ICPSR+EADKAVNA HNK+TLPGASSPLQVKYA
Sbjct: 42 FLILDQLVHHFDLDLRCTGPFAGCCFLICPSREEADKAVNAYHNKRTLPGASSPLQVKYA 101
Query: 95 DGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSK-GCAFLKYETK 153
DGELERLEHKLFIGMLPKNV++AE++ LFS YG IKDLQILRGSQQTSK GCAFLKYETK
Sbjct: 102 DGELERLEHKLFIGMLPKNVTDAEMTDLFSQYGNIKDLQILRGSQQTSKAGCAFLKYETK 161
Query: 154 EQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS-QHPSL 212
EQALAA+EA+NGKHK+EGSSVPLVVKWADTEKERQAR+AQKAQ +N+ N ++ Q SL
Sbjct: 162 EQALAAIEALNGKHKIEGSSVPLVVKWADTEKERQARKAQKAQFHPSNMSNPNAMQQSSL 221
Query: 213 FGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLS 272
FGA+ MGY P YNGYGYQ G+YGLMQY L PMQNQ F ++ VNQG+++RG + +LS
Sbjct: 222 FGAMQMGYVPQYNGYGYQPQGTYGLMQYPLSPMQNQAAFPNMVQSVNQGSSIRGVNSELS 281
Query: 273 SNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPST 332
N PR++ S +GS Y VP +QYP YPG + RP NS S+ AN++ T
Sbjct: 282 PNSAPRSFN---SMQLGSPYSPVPSMQYPGSYPGNAINSRPFVNSHNSMKVPNANASSPT 338
Query: 333 SSSGGTGSGGQIEGFLS 349
SSS + G QIEG S
Sbjct: 339 SSSTSSNPGPQIEGLSS 355
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 65/116 (56%), Gaps = 1/116 (0%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLF+G +PK++T+A++ +F ++ + ++ I++ + GC F+ ++++A A+ A
Sbjct: 111 KLFIGMLPKNVTDAEMTDLFSQYGNIKDLQILRGSQQTSKAGCAFLKYETKEQALAAIEA 170
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKLFIGML-PKNVSEAEVSALFSIYGTIK 130
+ K + G+S PL VK+AD E ER K P N+S S++G ++
Sbjct: 171 LNGKHKIEGSSVPLVVKWADTEKERQARKAQKAQFHPSNMSNPNAMQQSSLFGAMQ 226
>gi|222631366|gb|EEE63498.1| hypothetical protein OsJ_18314 [Oryza sativa Japonica Group]
Length = 492
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/314 (64%), Positives = 239/314 (76%), Gaps = 8/314 (2%)
Query: 38 FALVDEVNIIKDKTTRAS---RGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYA 94
F ++D++ D R + GCCF+ICPSR+EADKAVNA HNK+TLPGASSPLQVKYA
Sbjct: 3 FLILDQLVHHFDLDLRCTGPFAGCCFLICPSREEADKAVNAYHNKRTLPGASSPLQVKYA 62
Query: 95 DGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSK-GCAFLKYETK 153
DGELERLEHKLFIGMLPKNV++AE++ LFS YG IKDLQILRGSQQTSK GCAFLKYETK
Sbjct: 63 DGELERLEHKLFIGMLPKNVTDAEMTDLFSQYGNIKDLQILRGSQQTSKAGCAFLKYETK 122
Query: 154 EQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS-QHPSL 212
EQALAA+EA+NGKHK+EGSSVPLVVKWADTEKERQAR+AQKAQ +N+ N ++ Q SL
Sbjct: 123 EQALAAIEALNGKHKIEGSSVPLVVKWADTEKERQARKAQKAQFHPSNMSNPNAMQQSSL 182
Query: 213 FGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLS 272
FGA+ MGY P YNGYGYQ G+YGLMQY L PMQNQ F ++ VNQG+++RG + +LS
Sbjct: 183 FGAMQMGYVPQYNGYGYQPQGTYGLMQYPLSPMQNQAAFPNMVQSVNQGSSIRGVNSELS 242
Query: 273 SNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPST 332
N PR++ S +GS Y VP +QYP YPG + RP NS S+ AN++ T
Sbjct: 243 PNSAPRSFN---SMQLGSPYSPVPSMQYPGSYPGNAINSRPFVNSHNSMKVPNANASSPT 299
Query: 333 SSSGGTGSGGQIEG 346
SSS + G QIEG
Sbjct: 300 SSSTSSNPGPQIEG 313
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 68/121 (56%), Gaps = 3/121 (2%)
Query: 13 ERV--KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
ER+ KLF+G +PK++T+A++ +F ++ + ++ I++ + GC F+ ++++A
Sbjct: 67 ERLEHKLFIGMLPKNVTDAEMTDLFSQYGNIKDLQILRGSQQTSKAGCAFLKYETKEQAL 126
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGML-PKNVSEAEVSALFSIYGTI 129
A+ A + K + G+S PL VK+AD E ER K P N+S S++G +
Sbjct: 127 AAIEALNGKHKIEGSSVPLVVKWADTEKERQARKAQKAQFHPSNMSNPNAMQQSSLFGAM 186
Query: 130 K 130
+
Sbjct: 187 Q 187
>gi|168043683|ref|XP_001774313.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674305|gb|EDQ60815.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 414
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 180/339 (53%), Positives = 227/339 (66%), Gaps = 32/339 (9%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ VKLFVGQ+PK M+E QL+ +F E V+E+NIIKDK T+ SRGCCF+ +RQEADKA
Sbjct: 14 DSVKLFVGQLPKQMSEQQLVEIFSEAGTVNEINIIKDKLTKLSRGCCFLTYTTRQEADKA 73
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+ HNK+TL +SPLQVKYADGE+ERLEHKLFIGMLPK S+A+V+A+FS YGTIK+L
Sbjct: 74 IEIFHNKRTLQPVASPLQVKYADGEMERLEHKLFIGMLPKAASKADVTAVFSQYGTIKEL 133
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+++GSQ TSKGCAFLKYETKEQA+AA+EA+NG HKMEGS LVVKWADTEKERQAR+
Sbjct: 134 SVIKGSQPTSKGCAFLKYETKEQAVAAIEALNGVHKMEGSPSALVVKWADTEKERQARKV 193
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYA---PPYNGYGYQASGSYGLMQYRLPPMQNQP 249
QKAQS ++ P PS+FGA+PMGY PPYNGY YQ +Y M Y QP
Sbjct: 194 QKAQSVSS--PPIPGHQPSIFGAVPMGYVTTPPPYNGYSYQPMSNYA-MAY-----PQQP 245
Query: 250 GFHGIIPPVNQGNAMRGASPDLSSNMGPRNYA-MPPSGFVGSGYPAVPGLQYPMPYPGGM 308
G G+ A+ G D+++ YA M P+ F QYP PY G M
Sbjct: 246 GMVGL------PTAIPGTQSDMTA------YAPMQPTTF------PFGAQQYPNPYQGQM 287
Query: 309 LGHRPLNNSPGSVSPAVANSNPSTSSSG-GTGSGGQIEG 346
+GH+ + P ++P + +N +++ T G Q EG
Sbjct: 288 MGHQG-QSYPSPIAPLIGMNNAQAAAAAVRTSVGPQTEG 325
>gi|327493207|gb|AEA86310.1| RNA-binding protein [Solanum nigrum]
Length = 187
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 149/188 (79%), Positives = 168/188 (89%), Gaps = 1/188 (0%)
Query: 53 RASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPK 112
RASRGCCFVICPSR+EA+KA+ ACHNK+TLPGASSPLQVKYADG LERLEHKLF+GMLPK
Sbjct: 1 RASRGCCFVICPSREEANKAITACHNKQTLPGASSPLQVKYADGVLERLEHKLFVGMLPK 60
Query: 113 NVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGS 172
NVS+ EVS+LFS YGTI DLQILRGSQQ S+G AFLKYE KEQA+AA+EA+NGKH MEG+
Sbjct: 61 NVSDLEVSSLFSQYGTITDLQILRGSQQASRGYAFLKYEKKEQAIAAVEALNGKHTMEGA 120
Query: 173 SVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQAS 232
+VPLVVKWADTE+ERQARR QKA SQA+N N+ QHPSL+G+L MGY PPYNGY YQ
Sbjct: 121 TVPLVVKWADTERERQARRTQKALSQASNASNS-GQHPSLYGSLSMGYMPPYNGYAYQTP 179
Query: 233 GSYGLMQY 240
G+YGLMQY
Sbjct: 180 GTYGLMQY 187
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG +PK++++ ++ ++F ++ + ++ I++ + +ASRG F+ +++A AV A
Sbjct: 52 KLFVGMLPKNVSDLEVSSLFSQYGTITDLQILRG-SQQASRGYAFLKYEKKEQAIAAVEA 110
Query: 76 CHNKKTLPGASSPLQVKYADGELER 100
+ K T+ GA+ PL VK+AD E ER
Sbjct: 111 LNGKHTMEGATVPLVVKWADTERER 135
>gi|168002776|ref|XP_001754089.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694643|gb|EDQ80990.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 429
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 171/312 (54%), Positives = 212/312 (67%), Gaps = 42/312 (13%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ VKLFVGQ+PK M+E QL+ +F E V E+NIIKDK T+ SRGCCF+ +RQEADKA
Sbjct: 14 DSVKLFVGQLPKQMSEQQLVEVFSEAGTVHEINIIKDKLTKQSRGCCFLTYTTRQEADKA 73
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+ HNK+TL +SPLQVKYADGE+ERLEHKLFIGMLPK S+A+V A+FS YG+IK+L
Sbjct: 74 IEIFHNKRTLQPVASPLQVKYADGEMERLEHKLFIGMLPKGASKADVMAVFSPYGSIKEL 133
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+++GSQ TSKGCAFLKYETKEQA+AA+EA+NG H+MEGS LVVKWADTEKERQAR+
Sbjct: 134 SVIKGSQPTSKGCAFLKYETKEQAIAAIEALNGVHRMEGSPSALVVKWADTEKERQARKV 193
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYA---PPYNGYGYQASGSYGLMQYRLPPMQN-- 247
QKAQS ++ P Q PS+FGA+PMGY PPYNGY YQ L+Q P+ N
Sbjct: 194 QKAQSVSS--PPIPGQQPSIFGAVPMGYVTAPPPYNGYPYQP-----LVQ----PISNYA 242
Query: 248 -----QPGFHGIIPPVNQGNAMRGASPDLSSN--MGPRNYAMPPSGFVGSGYPAVPGLQY 300
QPG G+ A+ G+ DL++ M P Y G QY
Sbjct: 243 IAYPQQPGMVGL------PTAIPGSQSDLTAYAPMQPATYPF-------------AGQQY 283
Query: 301 PMPYPGGMLGHR 312
P+PY G ++GH+
Sbjct: 284 PVPYQGQIIGHQ 295
>gi|302786984|ref|XP_002975262.1| hypothetical protein SELMODRAFT_442777 [Selaginella moellendorffii]
gi|300156836|gb|EFJ23463.1| hypothetical protein SELMODRAFT_442777 [Selaginella moellendorffii]
Length = 427
Score = 313 bits (803), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 165/311 (53%), Positives = 219/311 (70%), Gaps = 15/311 (4%)
Query: 8 KKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQ 67
K + + VKLFVGQ+PKH+T+ +LL +F+E V ++NIIKDK+T+ SRGCCF+ SR
Sbjct: 4 KSKAPDAVKLFVGQIPKHLTQEELLPIFEEAGAVFDINIIKDKSTKQSRGCCFLTYSSRS 63
Query: 68 EADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYG 127
EAD A++ HNKKT+ +SP+QVKYADGELERLEHKLFIGMLPK+V+EAEV +FS YG
Sbjct: 64 EADNAIDLFHNKKTISPMNSPMQVKYADGELERLEHKLFIGMLPKSVTEAEVRDVFSEYG 123
Query: 128 TIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
IK+LQ+++GSQQT+K CAFLKYET+E+A A+EA+NG ++MEG+S LVVKWADTEKER
Sbjct: 124 NIKELQVIKGSQQTAKACAFLKYETREEAAGAVEALNGIYRMEGASSALVVKWADTEKER 183
Query: 188 QARRAQKAQ--SQANN--LPNADSQHP--SLFGALPMGYAPPYNGYGYQASGSYGLMQYR 241
QAR+ QK+Q S A N L Q P + FG LP+ P +NG+ YQAS +YG++ Y
Sbjct: 184 QARKMQKSQTLSPATNGALAAPLPQQPASASFGPLPLA-TPQFNGFAYQAS-TYGIVPYP 241
Query: 242 LPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSN-MGPRNYAMPPSGFVGSGYPAVPGLQY 300
+QNQP G+ Q ++ G D+ S + P + P+G+V S + V G QY
Sbjct: 242 ASSLQNQPLISGMTTGTTQ--SLPGTLSDIGSGVLTP----VQPAGYVNSAFSNVAGRQY 295
Query: 301 PMPYPGGMLGH 311
P+ Y G +LG
Sbjct: 296 PLAYQGALLGQ 306
>gi|302811484|ref|XP_002987431.1| hypothetical protein SELMODRAFT_269263 [Selaginella moellendorffii]
gi|300144837|gb|EFJ11518.1| hypothetical protein SELMODRAFT_269263 [Selaginella moellendorffii]
Length = 428
Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 165/313 (52%), Positives = 217/313 (69%), Gaps = 18/313 (5%)
Query: 8 KKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQ 67
K + + VKLFVGQ+PKH+T+ +LL +F+E V ++NIIKDK+T+ SRGCCF+ SR
Sbjct: 4 KSKAPDAVKLFVGQIPKHLTQEELLPIFEEAGAVFDINIIKDKSTKQSRGCCFLTYSSRS 63
Query: 68 EADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYG 127
EAD A++ HNKKT+ +SP+QVKYADGELERLEHKLFIGMLPK+V+EAEV +FS YG
Sbjct: 64 EADNAIDLFHNKKTISPMNSPMQVKYADGELERLEHKLFIGMLPKSVTEAEVRDVFSEYG 123
Query: 128 TIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
IK+LQ+++GSQQT+K CAFLKYET+E+A A+EA+NG ++MEG+S LVVKWADTEKER
Sbjct: 124 NIKELQVIKGSQQTAKACAFLKYETREEAAGAVEALNGIYRMEGASSALVVKWADTEKER 183
Query: 188 QARRAQKAQ--SQANN------LPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQ 239
QAR+ QK+Q S A N LP S FG LP+ P +NG+ YQAS +YG++
Sbjct: 184 QARKMQKSQTLSPATNGALAAPLPGQQPASAS-FGPLPLA-TPQFNGFAYQAS-TYGIVP 240
Query: 240 YRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSN-MGPRNYAMPPSGFVGSGYPAVPGL 298
Y +QNQP G+ Q + G D+ S + P + P+G+V S + V G
Sbjct: 241 YPASSLQNQPLISGMTTGTTQ--PLPGTLSDIGSGVLTP----VQPAGYVNSAFSNVAGR 294
Query: 299 QYPMPYPGGMLGH 311
QYP+ Y G +LG
Sbjct: 295 QYPLAYQGALLGQ 307
>gi|255636493|gb|ACU18585.1| unknown [Glycine max]
Length = 161
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 141/160 (88%), Positives = 149/160 (93%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
MAE K+E K SEE VKLFVGQVPK M E ++LAMFKEFALVDEVNII+DK +RA RGCCF
Sbjct: 2 MAEGKEESKFSEESVKLFVGQVPKRMAEDEVLAMFKEFALVDEVNIIRDKASRAPRGCCF 61
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
VICPSR+EADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN+SE EVS
Sbjct: 62 VICPSREEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNISEDEVS 121
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAAL 160
LFS+YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAAL
Sbjct: 122 DLFSMYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAAL 161
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEA 162
KLF+G +PK ++E EV A+F + + ++ I+R + + +GC F+ ++E+A A+ A
Sbjct: 17 KLFVGQVPKRMAEDEVLAMFKEFALVDEVNIIRDKASRAPRGCCFVICPSREEADKAVNA 76
Query: 163 INGKHKMEGSSVPLVVKWADTEKER 187
+ K + G+S PL VK+AD E ER
Sbjct: 77 CHNKKTLPGASSPLQVKYADGELER 101
>gi|115473901|ref|NP_001060549.1| Os07g0663300 [Oryza sativa Japonica Group]
gi|33354192|dbj|BAC81150.1| putative CUG triplet repeat RNA-binding protein 1 [Oryza sativa
Japonica Group]
gi|50510234|dbj|BAD31432.1| putative CUG triplet repeat RNA-binding protein 1 [Oryza sativa
Japonica Group]
gi|113612085|dbj|BAF22463.1| Os07g0663300 [Oryza sativa Japonica Group]
gi|215713561|dbj|BAG94698.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 427
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 163/343 (47%), Positives = 218/343 (63%), Gaps = 17/343 (4%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
ERV+LFVGQVP+ M E +LA+ + A D+ +I+D+ T ASRGCCFV+C SR+EADKA
Sbjct: 10 ERVRLFVGQVPRSMAEEDILAVVRAAARADDATVIRDRATGASRGCCFVVCSSREEADKA 69
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
+ A HNK TLPGAS +QVKYADGELERL E KLFIGMLP++V E EVSALFS YG I+
Sbjct: 70 IAAYHNKCTLPGASRAMQVKYADGELERLAAEQKLFIGMLPRDVKENEVSALFSQYGNIR 129
Query: 131 DLQILRGSQQTSK--GCAFLKYETKEQALAALEAINGKHKM-EGSSVPLVVKWADTEKER 187
L++LR Q+T K CA L++ +KE A AA+EA+NG + GSS LVVK ADTE+E+
Sbjct: 130 QLKVLRSPQKTRKAAACAILEFGSKEHARAAIEALNGTRVVFNGSSATLVVKLADTEREK 189
Query: 188 QARRAQKAQSQANNLPNADSQHPSLF---GALPMGYAPPYNGYGYQASGSYGLMQYRLPP 244
QAR+AQKAQ+Q + P P L GA M + PPYN Y+ G YG + L
Sbjct: 190 QARKAQKAQAQPSK-PLRFYLFPQLLSISGAPQMSFLPPYNVLDYKVPGHYGHTKNPLAL 248
Query: 245 MQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPR-NYAMPPSGFVGSGYPAVPGLQYPMP 303
+ + P VNQGN ++G + ++ P+ + + +G++ YP + GL YP+
Sbjct: 249 ------YSTMYPHVNQGNLLQGLNTNIFPGTDPKISNLIQSAGYIQPPYPDLSGLHYPVS 302
Query: 304 YPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEG 346
Y G ++G P S G V+ ++SN SS+ T G +IEG
Sbjct: 303 YAGALVGDTPQYFSDGKVNIPNSHSN-HASSAANTKIGSKIEG 344
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 95 DGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETK 153
DGE +LF+G +P++++E ++ A+ D ++R + S+GC F+ ++
Sbjct: 4 DGEDGGERVRLFVGQVPRSMAEEDILAVVRAAARADDATVIRDRATGASRGCCFVVCSSR 63
Query: 154 EQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
E+A A+ A + K + G+S + VK+AD E ER A
Sbjct: 64 EEADKAIAAYHNKCTLPGASRAMQVKYADGELERLA 99
>gi|218200205|gb|EEC82632.1| hypothetical protein OsI_27223 [Oryza sativa Indica Group]
gi|222637626|gb|EEE67758.1| hypothetical protein OsJ_25469 [Oryza sativa Japonica Group]
Length = 497
Score = 238 bits (606), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 129/228 (56%), Positives = 162/228 (71%), Gaps = 7/228 (3%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
ERV+LFVGQVP+ M E +LA+ + A D+ +I+D+ T ASRGCCFV+C SR+EADKA
Sbjct: 10 ERVRLFVGQVPRSMAEEDILAVVRAAARADDATVIRDRATGASRGCCFVVCSSREEADKA 69
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
+ A HNK TLPGAS +QVKYADGELERL E KLFIGMLP++V E EVSALFS YG I+
Sbjct: 70 IAAYHNKCTLPGASRAMQVKYADGELERLAAEQKLFIGMLPRDVKENEVSALFSQYGNIR 129
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM-EGSSVPLVVKWADTEKERQA 189
L++LR Q+T K CA L++ +KE A AA+EA+NG + GSS LVVK ADTE+E+QA
Sbjct: 130 QLKVLRSPQKTRKACAILEFGSKEHARAAIEALNGTRVVFNGSSATLVVKLADTEREKQA 189
Query: 190 RRAQKAQSQANNLPNADSQHPSLF---GALPMGYAPPYNGYGYQASGS 234
R+AQKAQ+Q + P P L GA M + PPYN Y+ G+
Sbjct: 190 RKAQKAQAQPSK-PLRFYLFPQLLSISGAPQMSFLPPYNVLDYKTEGT 236
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 160/359 (44%), Gaps = 49/359 (13%)
Query: 2 AESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKD-KTTRASRGCCF 60
A+ + E+ ++E+ KLF+G +P+ + E ++ A+F ++ + ++ +++ + TR + C
Sbjct: 91 ADGELERLAAEQ--KLFIGMLPRDVKENEVSALFSQYGNIRQLKVLRSPQKTR--KACAI 146
Query: 61 VICPSRQEADKAVNACHNKKTL-PGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEV 119
+ S++ A A+ A + + + G+S+ L VK AD E E+ K ++A+
Sbjct: 147 LEFGSKEHARAAIEALNGTRVVFNGSSATLVVKLADTEREKQARK-------AQKAQAQP 199
Query: 120 SALFSIYGTIKDLQILRGSQQTSKGCAFLK-YETKEQALAALEAINGKHKMEGSSVPLVV 178
S Y L + G+ Q S FL Y + +K EG++ P +
Sbjct: 200 SKPLRFY-LFPQLLSISGAPQMS----FLPPYNVLD------------YKTEGTTDPELK 242
Query: 179 KWADTEKERQARRAQKAQSQANNLPNA----DSQHPSLFGALPM-----GYAP-PYNGYG 228
++ + +S N L N D P LP+ Y P +
Sbjct: 243 DLMKMTNDKLEMLVTELKSVVNLLENRVTYNDPIQPIQHSLLPVEHDEKQYKPNECDSKT 302
Query: 229 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPR-NYAMPPSGF 287
+ G YG + L + + P VNQGN ++G + ++ P+ + + +G+
Sbjct: 303 LEVPGHYGHTKNPLAL------YSTMYPHVNQGNLLQGLNTNIFPGTDPKISNLIQSAGY 356
Query: 288 VGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEG 346
+ YP + GL YP+ Y G ++G P S G V+ ++SN SS+ T G +IEG
Sbjct: 357 IQPPYPDLSGLHYPVSYAGALVGDTPQYFSDGKVNIPNSHSN-HASSAANTKIGSKIEG 414
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 95 DGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETK 153
DGE +LF+G +P++++E ++ A+ D ++R + S+GC F+ ++
Sbjct: 4 DGEDGGERVRLFVGQVPRSMAEEDILAVVRAAARADDATVIRDRATGASRGCCFVVCSSR 63
Query: 154 EQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
E+A A+ A + K + G+S + VK+AD E ER A
Sbjct: 64 EEADKAIAAYHNKCTLPGASRAMQVKYADGELERLA 99
>gi|218196668|gb|EEC79095.1| hypothetical protein OsI_19720 [Oryza sativa Indica Group]
Length = 338
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/154 (64%), Positives = 119/154 (77%), Gaps = 4/154 (2%)
Query: 144 GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLP 203
GCAFLKYETKEQALAA+EA+NGKHK+EGSSVPLVVKWADTEKERQAR+AQKAQ +N+
Sbjct: 178 GCAFLKYETKEQALAAIEALNGKHKIEGSSVPLVVKWADTEKERQARKAQKAQFHPSNMS 237
Query: 204 NADS-QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGN 262
N ++ Q SLFGA+ MGY P YNGYGYQ G+YGLMQY L PMQNQ F ++ VNQG+
Sbjct: 238 NPNAMQQSSLFGAMQMGYVPQYNGYGYQPQGTYGLMQYPLSPMQNQAAFPNMVQSVNQGS 297
Query: 263 AMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVP 296
++RG + +LS N PR++ S +GS Y VP
Sbjct: 298 SIRGVNSELSPNSAPRSFN---STQLGSPYSPVP 328
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 39 ALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGEL 98
AL+ V + ++T GC F+ ++++A A+ A + K + G+S PL VK+AD E
Sbjct: 165 ALLGTVTVHAEET-----GCAFLKYETKEQALAAIEALNGKHKIEGSSVPLVVKWADTEK 219
Query: 99 ERLEHKLFIGML-PKNVSEAEVSALFSIYGTIK 130
ER K P N+S S++G ++
Sbjct: 220 ERQARKAQKAQFHPSNMSNPNAMQQSSLFGAMQ 252
>gi|91090137|ref|XP_976135.1| PREDICTED: similar to arrest CG31762-PC isoform 4 [Tribolium
castaneum]
Length = 494
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 135/196 (68%), Gaps = 1/196 (0%)
Query: 6 KEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPS 65
++++ + +K+FVGQVP+ M E L MF+E+ V +N+++DKTT AS+GCCFV +
Sbjct: 84 EQEQPDSDTIKMFVGQVPRSMDENDLRRMFEEYGRVHSINVLRDKTTGASKGCCFVTFFT 143
Query: 66 RQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSI 125
R+ A +A +A HN KTL G P+Q+K AD E R E KLF+GML K + E +V LFS
Sbjct: 144 RKAALQAQDALHNVKTLNGMHHPIQMKPADSE-NRNERKLFVGMLSKKLCENDVRTLFSG 202
Query: 126 YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
YGTI++ +LR + SKGCAF+ + +K+ AL+A++A++ MEG S PLVVK+ADT+K
Sbjct: 203 YGTIEECTVLRDTAGNSKGCAFVTFASKQSALSAIKALHQSQTMEGCSAPLVVKFADTQK 262
Query: 186 ERQARRAQKAQSQANN 201
E++ +R Q+ Q+ N
Sbjct: 263 EKELKRQQQIQANVWN 278
>gi|289812790|gb|ADD18414.1| RNA-binding protein CUGBP1/BrUNO [Glossina morsitans morsitans]
Length = 706
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 132/196 (67%), Gaps = 1/196 (0%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M EAQL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 291 EKEPDPDNIKMFVGQVPKSMDEAQLREMFEEYGPVHSINVLRDKATGISKGCCFVTFYTR 350
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
+ A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 351 RAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 409
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 186
G I++ +LR SKGCAF+ + TK A++A++ +N MEG + PLVVK+ADT+KE
Sbjct: 410 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKTLNQNKTMEGCTSPLVVKFADTQKE 469
Query: 187 RQARRAQKAQSQANNL 202
++ ++ Q+ Q+ NL
Sbjct: 470 KEQKKIQQIQANLWNL 485
>gi|270013480|gb|EFA09928.1| hypothetical protein TcasGA2_TC012080 [Tribolium castaneum]
Length = 469
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 135/196 (68%), Gaps = 1/196 (0%)
Query: 6 KEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPS 65
++++ + +K+FVGQVP+ M E L MF+E+ V +N+++DKTT AS+GCCFV +
Sbjct: 59 EQEQPDSDTIKMFVGQVPRSMDENDLRRMFEEYGRVHSINVLRDKTTGASKGCCFVTFFT 118
Query: 66 RQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSI 125
R+ A +A +A HN KTL G P+Q+K AD E R E KLF+GML K + E +V LFS
Sbjct: 119 RKAALQAQDALHNVKTLNGMHHPIQMKPADSE-NRNERKLFVGMLSKKLCENDVRTLFSG 177
Query: 126 YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
YGTI++ +LR + SKGCAF+ + +K+ AL+A++A++ MEG S PLVVK+ADT+K
Sbjct: 178 YGTIEECTVLRDTAGNSKGCAFVTFASKQSALSAIKALHQSQTMEGCSAPLVVKFADTQK 237
Query: 186 ERQARRAQKAQSQANN 201
E++ +R Q+ Q+ N
Sbjct: 238 EKELKRQQQIQANVWN 253
>gi|350417598|ref|XP_003491500.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member
2-like [Bombus impatiens]
Length = 635
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 126/190 (66%), Gaps = 1/190 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQVP M E L +F+EF V ++NI++DK T + RGCCFV +R+ A A
Sbjct: 107 DNIKMFVGQVPHDMDENDLRKLFEEFGRVHQINILRDKITGSHRGCCFVTFYTRKAALDA 166
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
NA HN KT G P+Q+K AD E R E KLF+GML K SE +V +FSIYGTI++
Sbjct: 167 QNALHNVKTFSGMRHPIQMKPADSE-NRNERKLFVGMLSKKFSENDVRNMFSIYGTIEEC 225
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR S SK CAF+ + +K+ A+ A++A++ MEG S PLVVK+ADT+KE+ +R
Sbjct: 226 SVLRDSTGKSKACAFVTFASKQYAINAIKALHHSQTMEGCSSPLVVKFADTQKEKDQKRM 285
Query: 193 QKAQSQANNL 202
Q+ Q+ N+
Sbjct: 286 QQLQTNLWNI 295
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 61/99 (61%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG + K +E + MF + ++E ++++D T + S+ C FV S+
Sbjct: 189 DSENRNER-KLFVGMLSKKFSENDVRNMFSIYGTIEECSVLRDSTGK-SKACAFVTFASK 246
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
Q A A+ A H+ +T+ G SSPL VK+AD + E+ + ++
Sbjct: 247 QYAINAIKALHHSQTMEGCSSPLVVKFADTQKEKDQKRM 285
>gi|340718155|ref|XP_003397537.1| PREDICTED: CUGBP Elav-like family member 2-like [Bombus terrestris]
Length = 627
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 126/190 (66%), Gaps = 1/190 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQVP M E L +F+EF V ++NI++DK T + RGCCFV +R+ A A
Sbjct: 106 DNIKMFVGQVPHDMDENDLRKLFEEFGRVHQINILRDKITGSHRGCCFVTFYTRKAALDA 165
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
NA HN KT G P+Q+K AD E R E KLF+GML K SE +V +FSIYGTI++
Sbjct: 166 QNALHNVKTFSGMRHPIQMKPADSE-NRNERKLFVGMLSKKFSENDVRNMFSIYGTIEEC 224
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR S SK CAF+ + +K+ A+ A++A++ MEG S PLVVK+ADT+KE+ +R
Sbjct: 225 SVLRDSTGKSKACAFVTFASKQYAINAIKALHHSQTMEGCSSPLVVKFADTQKEKDQKRM 284
Query: 193 QKAQSQANNL 202
Q+ Q+ N+
Sbjct: 285 QQLQTNLWNI 294
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 61/99 (61%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG + K +E + MF + ++E ++++D T + S+ C FV S+
Sbjct: 188 DSENRNER-KLFVGMLSKKFSENDVRNMFSIYGTIEECSVLRDSTGK-SKACAFVTFASK 245
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
Q A A+ A H+ +T+ G SSPL VK+AD + E+ + ++
Sbjct: 246 QYAINAIKALHHSQTMEGCSSPLVVKFADTQKEKDQKRM 284
>gi|380013066|ref|XP_003690591.1| PREDICTED: CUGBP Elav-like family member 2-like [Apis florea]
Length = 582
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 126/190 (66%), Gaps = 1/190 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQVP M E L +F+EF V ++NI++DK T + RGCCFV +R+ A A
Sbjct: 84 DNIKMFVGQVPHDMDENDLRKLFEEFGRVHQINILRDKITGSHRGCCFVTFYTRKAALDA 143
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
NA HN KT G P+Q+K AD E R E KLF+GML K +E +V +FS+YGTI++
Sbjct: 144 QNALHNVKTFNGMRHPIQMKPADSE-NRNERKLFVGMLSKKFTENDVRNMFSVYGTIEEC 202
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR S SK CAF+ + +K+ A+ A++A++ MEG S PLVVK+ADT+KE+ +R
Sbjct: 203 SVLRDSTGKSKACAFVTFASKQYAINAIKALHHSQTMEGCSSPLVVKFADTQKEKDQKRM 262
Query: 193 QKAQSQANNL 202
Q+ Q+ N+
Sbjct: 263 QQLQTNLWNI 272
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 61/99 (61%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG + K TE + MF + ++E ++++D T + S+ C FV S+
Sbjct: 166 DSENRNER-KLFVGMLSKKFTENDVRNMFSVYGTIEECSVLRDSTGK-SKACAFVTFASK 223
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
Q A A+ A H+ +T+ G SSPL VK+AD + E+ + ++
Sbjct: 224 QYAINAIKALHHSQTMEGCSSPLVVKFADTQKEKDQKRM 262
>gi|328780076|ref|XP_003249751.1| PREDICTED: CUGBP Elav-like family member 2-like [Apis mellifera]
Length = 628
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 126/190 (66%), Gaps = 1/190 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQVP M E L +F+EF V ++NI++DK T + RGCCFV +R+ A A
Sbjct: 107 DNIKMFVGQVPHDMDENDLRKLFEEFGRVHQINILRDKITGSHRGCCFVTFYTRKAALDA 166
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
NA HN KT G P+Q+K AD E R E KLF+GML K +E +V +FS+YGTI++
Sbjct: 167 QNALHNVKTFNGMRHPIQMKPADSE-NRNERKLFVGMLSKKFTENDVRNMFSVYGTIEEC 225
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR S SK CAF+ + +K+ A+ A++A++ MEG S PLVVK+ADT+KE+ +R
Sbjct: 226 SVLRDSTGKSKACAFVTFASKQYAINAIKALHHSQTMEGCSSPLVVKFADTQKEKDQKRM 285
Query: 193 QKAQSQANNL 202
Q+ Q+ N+
Sbjct: 286 QQLQTNLWNI 295
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 61/99 (61%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG + K TE + MF + ++E ++++D T + S+ C FV S+
Sbjct: 189 DSENRNER-KLFVGMLSKKFTENDVRNMFSVYGTIEECSVLRDSTGK-SKACAFVTFASK 246
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
Q A A+ A H+ +T+ G SSPL VK+AD + E+ + ++
Sbjct: 247 QYAINAIKALHHSQTMEGCSSPLVVKFADTQKEKDQKRM 285
>gi|357479035|ref|XP_003609803.1| FCA [Medicago truncatula]
gi|355510858|gb|AES92000.1| FCA [Medicago truncatula]
Length = 862
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 105/255 (41%), Positives = 145/255 (56%), Gaps = 24/255 (9%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
KLFVG VP+ TE + +F+E V EV +IKD+ T +GCCF+ + +EAD+A+
Sbjct: 157 AKLFVGSVPRTATEEDIRPLFEEHGNVVEVALIKDRKTGQHQGCCFIKYATSEEADQAIR 216
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG P+QV+YADGE ERL E+KLF+G L K S EV +FS YG I+D
Sbjct: 217 ALHNRHTLPGGVGPIQVRYADGERERLGAVEYKLFVGSLNKQASVKEVEEVFSKYGRIED 276
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+ ++R Q+ S+GC F+KY ++ ALAA+ A+NG + M G PL+V++AD ++ RQ
Sbjct: 277 VYLMRDDQKQSRGCGFVKYSHRDMALAAINALNGIYTMRGCEQPLIVRFADPKRPRQGDS 336
Query: 192 AQKAQSQANNLPNADSQHPSL--FGALPMG-YAPPYNGYGYQASGSYGLMQYRLPPMQN- 247
A A P DS L + PMG + PP N +R P N
Sbjct: 337 RGPAFGSAGFGPRLDSPGTRLPSNNSDPMGDHIPPPNA-------------WRPIPQPNT 383
Query: 248 ----QPGFHGIIPPV 258
GFHG+ PP+
Sbjct: 384 GTSFNAGFHGMGPPL 398
>gi|195117924|ref|XP_002003495.1| GI17944 [Drosophila mojavensis]
gi|193914070|gb|EDW12937.1| GI17944 [Drosophila mojavensis]
Length = 851
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/197 (46%), Positives = 133/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M EAQL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 383 EKEPDPDNIKMFVGQVPKSMDEAQLREMFEEYGPVHSINVLRDKATGISKGCCFVTFYTR 442
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
+ A KA +A HN KTL G P+Q+K AD E R E KLFIGML K ++E +V LF ++
Sbjct: 443 RAALKAQDALHNVKTLSGMYHPIQMKPADSE-NRNERKLFIGMLNKKLNENDVRKLFEVH 501
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 502 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 561
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 562 EKEQKKIQQIQANLWNL 578
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y + E + K+F+G +PK++ EA++ +F YG + + +LR SKGC F+
Sbjct: 379 VTYGEKEPDPDNIKMFVGQVPKSMDEAQLREMFEEYGPVHSINVLRDKATGISKGCCFVT 438
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 439 FYTRRAALKAQDALHNVKTLSGMYHPIQMKPADSENRNERK 479
>gi|168041276|ref|XP_001773118.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675665|gb|EDQ62158.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 203
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 90/171 (52%), Positives = 118/171 (69%), Gaps = 3/171 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ +TE ++ MF E V EV IIKDK T +GCCFV + +EA++A+
Sbjct: 16 VKLFVGSVPRTITEDEVRPMFAEHGNVLEVAIIKDKRTGNQQGCCFVKYSTVEEAERAIR 75
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+KTLPG SP+QV+YADGE ERL EHKLF+G L K SE E+ LF YG + D
Sbjct: 76 ALHNQKTLPGGVSPVQVRYADGERERLGAVEHKLFVGSLNKQASEKEIEELFIPYGRVDD 135
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
+ I+R Q+ S+GCAF+KY ++ A AA+ A+NG H M+G PL V++AD
Sbjct: 136 VYIMRDEQKQSRGCAFIKYSQRDHAQAAINALNGVHIMQGCDQPLAVRFAD 186
>gi|116007320|ref|NP_001036356.1| bruno-2, isoform E [Drosophila melanogaster]
gi|442627593|ref|NP_001260411.1| bruno-2, isoform L [Drosophila melanogaster]
gi|113194979|gb|ABI31310.1| bruno-2, isoform E [Drosophila melanogaster]
gi|440213741|gb|AGB92946.1| bruno-2, isoform L [Drosophila melanogaster]
Length = 893
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/218 (43%), Positives = 139/218 (63%), Gaps = 5/218 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+PK E +L MF++F V +N+++DK T SRGCCFV +R+ A +A
Sbjct: 293 DNIKMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYTRKAALRA 352
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A HN KTL G P+Q+K AD E R E KLF+GML K +EA+V LF+ +GTI++
Sbjct: 353 QDALHNIKTLDGMHHPIQMKPADSE-NRNERKLFVGMLNKKYTEADVRQLFTGHGTIEEC 411
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR SKGCAF+ + TK+ A+ A++A++ MEG S PLVVK+ADT+KE+ ++
Sbjct: 412 TVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 471
Query: 193 QKAQSQAN-NLPN---ADSQHPSLFGALPMGYAPPYNG 226
Q+ + N P+ A + P++ A + APP G
Sbjct: 472 QQIHAFCGINTPSGATAGAATPTINAATALIAAPPSAG 509
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG + K TEA + +F ++E +++D+ + S+GC FV ++
Sbjct: 375 DSENRNER-KLFVGMLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQ-SKGCAFVTFATK 432
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
Q A A+ A H +T+ G S+PL VK+AD + E+ + K+
Sbjct: 433 QNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 471
>gi|195388108|ref|XP_002052732.1| GJ17718 [Drosophila virilis]
gi|194149189|gb|EDW64887.1| GJ17718 [Drosophila virilis]
Length = 738
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 88/198 (44%), Positives = 133/198 (67%), Gaps = 2/198 (1%)
Query: 1 MAESKKEKKSSE-ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCC 59
MA+++ K + + +K+FVGQ+PK E +L +F++F V +N+++DK T SRGCC
Sbjct: 262 MADTESAKDQPDADNIKMFVGQIPKTWDELKLRRLFEQFGRVHTLNVLRDKVTSISRGCC 321
Query: 60 FVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEV 119
FV +R+ A +A +A HN KTL G P+Q+K AD E R E KLF+GML K +EA+V
Sbjct: 322 FVTYYTRKAALRAQDALHNIKTLDGMHHPIQMKPADSE-NRNERKLFVGMLNKKFTEADV 380
Query: 120 SALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVK 179
LF+ +GTI++ +LR SKGCAF+ + TK+ A+ A++A++ MEG S PLVVK
Sbjct: 381 RQLFTGHGTIEECTVLRDQVGQSKGCAFVTFATKQNAIGAIKALHQSQTMEGCSAPLVVK 440
Query: 180 WADTEKERQARRAQKAQS 197
+ADT+KE+ ++ Q+ Q+
Sbjct: 441 FADTQKEKDQKKMQQLQA 458
>gi|28574145|ref|NP_788039.1| bruno-2, isoform D [Drosophila melanogaster]
gi|442627591|ref|NP_001260410.1| bruno-2, isoform K [Drosophila melanogaster]
gi|28380348|gb|AAO41184.1| bruno-2, isoform D [Drosophila melanogaster]
gi|440213740|gb|AGB92945.1| bruno-2, isoform K [Drosophila melanogaster]
Length = 737
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 94/218 (43%), Positives = 139/218 (63%), Gaps = 5/218 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+PK E +L MF++F V +N+++DK T SRGCCFV +R+ A +A
Sbjct: 293 DNIKMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYTRKAALRA 352
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A HN KTL G P+Q+K AD E R E KLF+GML K +EA+V LF+ +GTI++
Sbjct: 353 QDALHNIKTLDGMHHPIQMKPADSE-NRNERKLFVGMLNKKYTEADVRQLFTGHGTIEEC 411
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR SKGCAF+ + TK+ A+ A++A++ MEG S PLVVK+ADT+KE+ ++
Sbjct: 412 TVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 471
Query: 193 QKAQSQAN-NLPN---ADSQHPSLFGALPMGYAPPYNG 226
Q+ + N P+ A + P++ A + APP G
Sbjct: 472 QQIHAFCGINTPSGATAGAATPTINAATALIAAPPSAG 509
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG + K TEA + +F ++E +++D+ + S+GC FV ++
Sbjct: 375 DSENRNER-KLFVGMLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQ-SKGCAFVTFATK 432
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
Q A A+ A H +T+ G S+PL VK+AD + E+ + K+
Sbjct: 433 QNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 471
>gi|2148976|gb|AAB58464.1| bruno [Drosophila melanogaster]
Length = 604
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 133/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M E+QL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 143 EKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTR 202
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
+ A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 203 RAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 261
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 262 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 321
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 322 EKEQKKIQQIQANLWNL 338
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y + E + K+F+G +PK++ E+++ +F YG + + +LR SKGC F+
Sbjct: 139 VTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVT 198
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 199 FYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERK 239
>gi|195435047|ref|XP_002065513.1| GK15493 [Drosophila willistoni]
gi|194161598|gb|EDW76499.1| GK15493 [Drosophila willistoni]
Length = 866
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 132/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M E QL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 371 EKEPDPDNIKMFVGQVPKSMDETQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTR 430
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
+ A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 431 RAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 489
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 490 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 549
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 550 EKEQKKIQQIQANLWNL 566
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y + E + K+F+G +PK++ E ++ +F YG + + +LR SKGC F+
Sbjct: 367 VTYGEKEPDPDNIKMFVGQVPKSMDETQLREMFEEYGAVHSINVLRDKATGISKGCCFVT 426
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 427 FYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERK 467
>gi|326505362|dbj|BAK03068.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 601
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 130/189 (68%), Gaps = 1/189 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+F GQ+P++M EA+L MF++F V ++N+++DK T S+GCCFV SR+ A A
Sbjct: 35 DAIKMFCGQIPRNMHEAELRDMFEQFGPVFQLNVLRDKQTGESKGCCFVTFYSRKSALDA 94
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
NA HN +TL G+ P+Q+K AD E R E KLF+GM+ KN+ E + +LF YGTI+D
Sbjct: 95 QNALHNLRTLNGSHHPIQMKPADTE-NRNERKLFVGMVSKNLDEPNIRSLFQSYGTIEDC 153
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR + S+GCAF+ ++ ++ AL A+++++ MEG S PLVVK+ADT K+++ ++
Sbjct: 154 TVLRDANGKSRGCAFVTFQKRQCALNAIKSMHQSQTMEGCSSPLVVKFADTPKDKETKKI 213
Query: 193 QKAQSQANN 201
Q+ + NN
Sbjct: 214 QQQYTTHNN 222
>gi|195388102|ref|XP_002052729.1| GJ17715 [Drosophila virilis]
gi|194149186|gb|EDW64884.1| GJ17715 [Drosophila virilis]
Length = 831
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 91/197 (46%), Positives = 133/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M EAQL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 363 EKEPDPDNIKMFVGQVPKSMDEAQLREMFEEYGPVHSINVLRDKATGISKGCCFVTFYTR 422
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
+ A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 423 RAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 481
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 482 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 541
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 542 EKEQKKIQQIQANLWNL 558
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y + E + K+F+G +PK++ EA++ +F YG + + +LR SKGC F+
Sbjct: 359 VTYGEKEPDPDNIKMFVGQVPKSMDEAQLREMFEEYGPVHSINVLRDKATGISKGCCFVT 418
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 419 FYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERK 459
>gi|24583877|ref|NP_723739.1| arrest, isoform A [Drosophila melanogaster]
gi|281364913|ref|NP_001162963.1| arrest, isoform E [Drosophila melanogaster]
gi|15291827|gb|AAK93182.1| LD29068p [Drosophila melanogaster]
gi|22946320|gb|AAN10812.1| arrest, isoform A [Drosophila melanogaster]
gi|220945910|gb|ACL85498.1| aret-PA [synthetic construct]
gi|220955600|gb|ACL90343.1| aret-PA [synthetic construct]
gi|272407017|gb|ACZ94249.1| arrest, isoform E [Drosophila melanogaster]
Length = 604
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 132/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M E+QL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 143 EKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTR 202
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 203 HAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 261
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 262 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 321
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 322 EKEQKKIQQIQANLWNL 338
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y + E + K+F+G +PK++ E+++ +F YG + + +LR SKGC F+
Sbjct: 139 VTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVT 198
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 199 FYTRHAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERK 239
>gi|442627567|ref|NP_723738.2| arrest, isoform F [Drosophila melanogaster]
gi|440213732|gb|AAN10811.2| arrest, isoform F [Drosophila melanogaster]
Length = 620
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 132/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M E+QL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 143 EKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTR 202
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 203 HAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 261
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 262 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 321
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 322 EKEQKKIQQIQANLWNL 338
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y + E + K+F+G +PK++ E+++ +F YG + + +LR SKGC F+
Sbjct: 139 VTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVT 198
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 199 FYTRHAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERK 239
>gi|442627571|ref|NP_001260404.1| arrest, isoform H [Drosophila melanogaster]
gi|442627573|ref|NP_001260405.1| arrest, isoform I [Drosophila melanogaster]
gi|442627575|ref|NP_001260406.1| arrest, isoform J [Drosophila melanogaster]
gi|442627577|ref|NP_001260407.1| arrest, isoform K [Drosophila melanogaster]
gi|440213734|gb|AGB92939.1| arrest, isoform H [Drosophila melanogaster]
gi|440213735|gb|AGB92940.1| arrest, isoform I [Drosophila melanogaster]
gi|440213736|gb|AGB92941.1| arrest, isoform J [Drosophila melanogaster]
gi|440213737|gb|AGB92942.1| arrest, isoform K [Drosophila melanogaster]
Length = 573
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 132/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M E+QL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 112 EKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTR 171
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 172 HAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 230
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 231 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 290
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 291 EKEQKKIQQIQANLWNL 307
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y + E + K+F+G +PK++ E+++ +F YG + + +LR SKGC F+
Sbjct: 108 VTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVT 167
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 168 FYTRHAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERK 208
>gi|195351033|ref|XP_002042041.1| GM26763 [Drosophila sechellia]
gi|194123865|gb|EDW45908.1| GM26763 [Drosophila sechellia]
Length = 816
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 133/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M E+QL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 343 EKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTR 402
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
+ A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 403 RAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 461
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 462 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 521
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 522 EKEQKKIQQIQANLWNL 538
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y + E + K+F+G +PK++ E+++ +F YG + + +LR SKGC F+
Sbjct: 339 VTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVT 398
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 399 FYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERK 439
>gi|2231301|gb|AAB61993.1| testis-specific RNP-type RNA binding protein [Drosophila
melanogaster]
Length = 808
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 133/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M E+QL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 347 EKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTR 406
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
+ A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 407 RAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 465
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 466 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 525
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 526 EKEQKKIQQIQANLWNL 542
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y + E + K+F+G +PK++ E+++ +F YG + + +LR SKGC F+
Sbjct: 343 VTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVT 402
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 403 FYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERK 443
>gi|302818861|ref|XP_002991103.1| hypothetical protein SELMODRAFT_450105 [Selaginella moellendorffii]
gi|300141197|gb|EFJ07911.1| hypothetical protein SELMODRAFT_450105 [Selaginella moellendorffii]
Length = 509
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 90/198 (45%), Positives = 132/198 (66%), Gaps = 13/198 (6%)
Query: 1 MAESKKEKKSSEER-------VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR 53
+A K+E+ +S+ VKLFVG VP+ +TE Q+ +MF+E+ V EV IIKD+ T
Sbjct: 21 VAGHKRERDNSDSSEGGQHTYVKLFVGSVPRTITEQQVRSMFEEYGEVLEVAIIKDRRTG 80
Query: 54 ASRG---CCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL---EHKLFI 107
+G CCFV SR EAD+A+ +N++TLPG +SP+QV+YADGE ERL EHKLF+
Sbjct: 81 HQQGMFCCCFVKYSSRDEADRAIRCLNNQRTLPGGASPVQVRYADGERERLGAIEHKLFV 140
Query: 108 GMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKH 167
G L K+ SE E+ +FS YG + D+ ++R + S+GCAF+KY +++ A AA+ A+N +
Sbjct: 141 GCLNKHASEREIEEVFSPYGRVDDIYVMRDEHKQSRGCAFIKYPSRDMAQAAIAALNDVY 200
Query: 168 KMEGSSVPLVVKWADTEK 185
M G PL V++AD ++
Sbjct: 201 IMRGCDQPLAVRFADPKR 218
>gi|259089631|gb|ACV91671.1| AT31783p [Drosophila melanogaster]
Length = 810
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 133/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M E+QL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 349 EKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTR 408
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
+ A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 409 RAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 467
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 468 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 527
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 528 EKEQKKIQQIQANLWNL 544
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y + E + K+F+G +PK++ E+++ +F YG + + +LR SKGC F+
Sbjct: 345 VTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVT 404
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 405 FYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERK 445
>gi|66802807|ref|XP_635247.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60463542|gb|EAL61727.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 489
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 83/176 (47%), Positives = 121/176 (68%), Gaps = 1/176 (0%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
KLFVGQ+PK E ++ +F A ++ V++IK+KTT +GC FV PSR+EAD+A+
Sbjct: 3 TKLFVGQIPKSFNEEEIKNLFTNIANIESVSLIKNKTTNEPQGCAFVSVPSREEADRAIE 62
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
HN K G + LQVKYAD E E+L KLF+GMLP++ E ++ LF +G ++D+ I
Sbjct: 63 QLHNSKKFQGVLNNLQVKYADSEQEKLASKLFVGMLPRSYEEEQIRELFEPHGVVEDICI 122
Query: 135 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
LRG SKGC F+K++ +E AL+A+ +NG K++GS PLVVK+ADTEK+++ +
Sbjct: 123 LRGPNSESKGCGFIKFDNRESALSAIATLNG-MKLDGSPNPLVVKFADTEKDKKKK 177
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+KK + + LFV +P + ++ LL +F+++ +V + DK T S+G FV
Sbjct: 392 NKKNQSVGPQGSNLFVYNIPNYFSDNDLLGLFQQYGIVVSAKVYVDKNTGVSKGFGFVSY 451
Query: 64 PSRQEADKAVNACH 77
+ A+ A++ H
Sbjct: 452 DNPASANLAISNLH 465
>gi|19921186|ref|NP_609559.1| bruno-2, isoform A [Drosophila melanogaster]
gi|17862264|gb|AAL39609.1| LD19052p [Drosophila melanogaster]
gi|22946323|gb|AAF53181.2| bruno-2, isoform A [Drosophila melanogaster]
gi|220943144|gb|ACL84115.1| bru-2-PA [synthetic construct]
Length = 632
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 94/218 (43%), Positives = 139/218 (63%), Gaps = 5/218 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+PK E +L MF++F V +N+++DK T SRGCCFV +R+ A +A
Sbjct: 293 DNIKMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYTRKAALRA 352
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A HN KTL G P+Q+K AD E R E KLF+GML K +EA+V LF+ +GTI++
Sbjct: 353 QDALHNIKTLDGMHHPIQMKPADSE-NRNERKLFVGMLNKKYTEADVRQLFTGHGTIEEC 411
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR SKGCAF+ + TK+ A+ A++A++ MEG S PLVVK+ADT+KE+ ++
Sbjct: 412 TVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 471
Query: 193 QKAQSQAN-NLPN---ADSQHPSLFGALPMGYAPPYNG 226
Q+ + N P+ A + P++ A + APP G
Sbjct: 472 QQIHAFCGINTPSGATAGAATPTINAATALIAAPPSAG 509
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG + K TEA + +F ++E +++D+ + S+GC FV ++
Sbjct: 375 DSENRNER-KLFVGMLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQ-SKGCAFVTFATK 432
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
Q A A+ A H +T+ G S+PL VK+AD + E+ + K+
Sbjct: 433 QNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 471
>gi|24583873|ref|NP_723737.1| arrest, isoform B [Drosophila melanogaster]
gi|442627569|ref|NP_001260403.1| arrest, isoform G [Drosophila melanogaster]
gi|22946318|gb|AAN10810.1| arrest, isoform B [Drosophila melanogaster]
gi|375065944|gb|AFA28453.1| FI19388p1 [Drosophila melanogaster]
gi|440213733|gb|AGB92938.1| arrest, isoform G [Drosophila melanogaster]
Length = 810
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 132/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M E+QL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 349 EKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTR 408
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 409 HAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 467
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 468 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 527
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 528 EKEQKKIQQIQANLWNL 544
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y + E + K+F+G +PK++ E+++ +F YG + + +LR SKGC F+
Sbjct: 345 VTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVT 404
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 405 FYTRHAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERK 445
>gi|194861289|ref|XP_001969750.1| GG23776 [Drosophila erecta]
gi|190661617|gb|EDV58809.1| GG23776 [Drosophila erecta]
Length = 837
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 133/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M E+QL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 364 EKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTR 423
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
+ A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 424 RAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 482
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 483 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 542
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 543 EKEQKKIQQIQANLWNL 559
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y + E + K+F+G +PK++ E+++ +F YG + + +LR SKGC F+
Sbjct: 360 VTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVT 419
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 420 FYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERK 460
>gi|195351037|ref|XP_002042043.1| GM26785 [Drosophila sechellia]
gi|194123867|gb|EDW45910.1| GM26785 [Drosophila sechellia]
Length = 644
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 94/218 (43%), Positives = 139/218 (63%), Gaps = 5/218 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+PK E +L MF++F V +N+++DK T SRGCCFV +R+ A +A
Sbjct: 305 DNIKMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYTRKAALRA 364
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A HN KTL G P+Q+K AD E R E KLF+GML K +EA+V LF+ +GTI++
Sbjct: 365 QDALHNIKTLDGMHHPIQMKPADSE-NRNERKLFVGMLNKKYTEADVRQLFTGHGTIEEC 423
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR SKGCAF+ + TK+ A+ A++A++ MEG S PLVVK+ADT+KE+ ++
Sbjct: 424 TVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 483
Query: 193 QKAQSQAN-NLPN---ADSQHPSLFGALPMGYAPPYNG 226
Q+ + N P+ A + P++ A + APP G
Sbjct: 484 QQIHAFCGINTPSGATAGAATPTINAATALIAAPPSAG 521
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG + K TEA + +F ++E +++D+ + S+GC FV ++
Sbjct: 387 DSENRNER-KLFVGMLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQ-SKGCAFVTFATK 444
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
Q A A+ A H +T+ G S+PL VK+AD + E+ + K+
Sbjct: 445 QNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 483
>gi|195578717|ref|XP_002079210.1| GD23828 [Drosophila simulans]
gi|194191219|gb|EDX04795.1| GD23828 [Drosophila simulans]
Length = 821
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 133/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M E+QL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 348 EKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTR 407
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
+ A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 408 RAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 466
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 467 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 526
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 527 EKEQKKIQQIQANLWNL 543
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y + E + K+F+G +PK++ E+++ +F YG + + +LR SKGC F+
Sbjct: 344 VTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVT 403
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 404 FYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERK 444
>gi|386769531|ref|NP_001246000.1| bruno-2, isoform G [Drosophila melanogaster]
gi|442627595|ref|NP_723742.2| bruno-2, isoform M [Drosophila melanogaster]
gi|383291458|gb|AFH03674.1| bruno-2, isoform G [Drosophila melanogaster]
gi|440213742|gb|AAF53180.4| bruno-2, isoform M [Drosophila melanogaster]
Length = 664
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 94/218 (43%), Positives = 139/218 (63%), Gaps = 5/218 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+PK E +L MF++F V +N+++DK T SRGCCFV +R+ A +A
Sbjct: 293 DNIKMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYTRKAALRA 352
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A HN KTL G P+Q+K AD E R E KLF+GML K +EA+V LF+ +GTI++
Sbjct: 353 QDALHNIKTLDGMHHPIQMKPADSE-NRNERKLFVGMLNKKYTEADVRQLFTGHGTIEEC 411
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR SKGCAF+ + TK+ A+ A++A++ MEG S PLVVK+ADT+KE+ ++
Sbjct: 412 TVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 471
Query: 193 QKAQSQAN-NLPN---ADSQHPSLFGALPMGYAPPYNG 226
Q+ + N P+ A + P++ A + APP G
Sbjct: 472 QQIHAFCGINTPSGATAGAATPTINAATALIAAPPSAG 509
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG + K TEA + +F ++E +++D+ + S+GC FV ++
Sbjct: 375 DSENRNER-KLFVGMLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQ-SKGCAFVTFATK 432
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
Q A A+ A H +T+ G S+PL VK+AD + E+ + K+
Sbjct: 433 QNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 471
>gi|195472345|ref|XP_002088461.1| GE18580 [Drosophila yakuba]
gi|194174562|gb|EDW88173.1| GE18580 [Drosophila yakuba]
Length = 830
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 133/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M E+QL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 357 EKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFYTR 416
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
+ A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 417 RAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 475
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 476 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 535
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 536 EKEQKKIQQIQANLWNL 552
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y + E + K+F+G +PK++ E+++ +F YG + + +LR SKGC F+
Sbjct: 353 VTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVT 412
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 413 FYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERK 453
>gi|194761400|ref|XP_001962917.1| GF14192 [Drosophila ananassae]
gi|190616614|gb|EDV32138.1| GF14192 [Drosophila ananassae]
Length = 852
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 133/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M E+QL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 377 EKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGPVHSINVLRDKATGISKGCCFVTFYTR 436
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
+ A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 437 RAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 495
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 496 GAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 555
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 556 EKEQKKIQQIQANLWNL 572
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y + E + K+F+G +PK++ E+++ +F YG + + +LR SKGC F+
Sbjct: 373 VTYGEKEPDPDNIKMFVGQVPKSMDESQLREMFEEYGPVHSINVLRDKATGISKGCCFVT 432
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 433 FYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERK 473
>gi|302819965|ref|XP_002991651.1| hypothetical protein SELMODRAFT_451447 [Selaginella moellendorffii]
gi|300140500|gb|EFJ07222.1| hypothetical protein SELMODRAFT_451447 [Selaginella moellendorffii]
Length = 480
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 90/199 (45%), Positives = 132/199 (66%), Gaps = 14/199 (7%)
Query: 1 MAESKKEKKSSEER-------VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR 53
+A K+E+ +S+ VKLFVG VP+ +TE Q+ +MF+E+ V EV IIKD+ T
Sbjct: 21 VAGHKRERDNSDSSEGGQHTYVKLFVGSVPRTITEQQVRSMFEEYGEVLEVAIIKDRRTG 80
Query: 54 ASRG---CCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL----EHKLF 106
+G CCFV SR EAD+A+ +N++TLPG +SP+QV+YADGE ERL EHKLF
Sbjct: 81 HQQGMFCCCFVKYSSRDEADRAIRCLNNQRTLPGGASPVQVRYADGERERLAGAIEHKLF 140
Query: 107 IGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGK 166
+G L K+ SE E+ +FS YG + D+ ++R + S+GCAF+KY +++ A AA+ A+N
Sbjct: 141 VGCLNKHASEREIEEVFSPYGRVDDIYVMRDEHKQSRGCAFIKYPSRDMAQAAIAALNDV 200
Query: 167 HKMEGSSVPLVVKWADTEK 185
+ M G PL V++AD ++
Sbjct: 201 YIMRGCDQPLAVRFADPKR 219
>gi|195035643|ref|XP_001989285.1| GH11642 [Drosophila grimshawi]
gi|193905285|gb|EDW04152.1| GH11642 [Drosophila grimshawi]
Length = 833
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 91/197 (46%), Positives = 133/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
EK+ + +K+FVGQVPK M EAQL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 363 EKEPDPDNIKMFVGQVPKSMDEAQLREMFEEYGPVHSINVLRDKATGISKGCCFVTFYTR 422
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
+ A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 423 RAALKAQDALHNVKTLNGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 481
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 482 GGIEECTVLRDPNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 541
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 542 EKEQKKIQQIQANLWNL 558
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y + E + K+F+G +PK++ EA++ +F YG + + +LR SKGC F+
Sbjct: 359 VTYGEKEPDPDNIKMFVGQVPKSMDEAQLREMFEEYGPVHSINVLRDKATGISKGCCFVT 418
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 419 FYTRRAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERK 459
>gi|196012894|ref|XP_002116309.1| hypothetical protein TRIADDRAFT_60275 [Trichoplax adhaerens]
gi|190581264|gb|EDV21342.1| hypothetical protein TRIADDRAFT_60275 [Trichoplax adhaerens]
Length = 456
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 100/233 (42%), Positives = 141/233 (60%), Gaps = 17/233 (7%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
++ +KLFVGQ+P+ TE L ++F +F + E+ +IKD+TT+ +GC FV + A+
Sbjct: 32 KDAIKLFVGQLPRDCTEEDLHSLFDQFGPIYELAVIKDRTTKQHKGCAFVTYCKKSSAEA 91
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A +A H KK L G P+QVK AD E R E KLF+GML K E E+ ++FS YG+I++
Sbjct: 92 AQSAFHEKKVLSGMPRPMQVKPADCE-NREERKLFVGMLGKLDDENELKSMFSPYGSIEE 150
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+ ILR +SKGC F+K+ TK +A A++ ++G M G+S LVVK+ADTEK++ R+
Sbjct: 151 VTILRAIDGSSKGCGFVKFSTKSEAQVAIQNLHGSRNMPGASHQLVVKFADTEKDKYIRK 210
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPP 244
QK NA + H FG YAP YN Y GSYG Q+ L P
Sbjct: 211 MQK---------NASNNHIVNFGRQYASYAPQYNNY-----GSYG--QFALQP 247
>gi|390176612|ref|XP_002132720.2| GA25725, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388858697|gb|EDY70122.2| GA25725, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 818
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/197 (44%), Positives = 133/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+K+ + +K+FVGQ+PK M E+QL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 355 DKEPDPDNIKMFVGQIPKSMDESQLREMFEEYGPVHSINVLRDKATGISKGCCFVTFFTR 414
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
+ A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 415 RAALKAQDALHNVKTLAGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 473
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 474 GNIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 533
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 534 EKEQKKIQQIQANLWNL 550
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y+D E + K+F+G +PK++ E+++ +F YG + + +LR SKGC F+
Sbjct: 351 VTYSDKEPDPDNIKMFVGQIPKSMDESQLREMFEEYGPVHSINVLRDKATGISKGCCFVT 410
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 411 FFTRRAALKAQDALHNVKTLAGMYHPIQMKPADSENRNERK 451
>gi|390176614|ref|XP_003736147.1| GA25725, isoform C [Drosophila pseudoobscura pseudoobscura]
gi|388858698|gb|EIM52220.1| GA25725, isoform C [Drosophila pseudoobscura pseudoobscura]
Length = 595
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/197 (44%), Positives = 133/197 (67%), Gaps = 2/197 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+K+ + +K+FVGQ+PK M E+QL MF+E+ V +N+++DK T S+GCCFV +R
Sbjct: 132 DKEPDPDNIKMFVGQIPKSMDESQLREMFEEYGPVHSINVLRDKATGISKGCCFVTFFTR 191
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
+ A KA +A HN KTL G P+Q+K AD E R E KLF+GML K ++E +V LF ++
Sbjct: 192 RAALKAQDALHNVKTLAGMYHPIQMKPADSE-NRNERKLFVGMLNKKLNENDVRKLFEVH 250
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK-MEGSSVPLVVKWADTEK 185
G I++ +LR SKGCAF+ + TK A++A++ ++K MEG + PLVVK+ADT+K
Sbjct: 251 GNIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNKIMEGCTSPLVVKFADTQK 310
Query: 186 ERQARRAQKAQSQANNL 202
E++ ++ Q+ Q+ NL
Sbjct: 311 EKEQKKIQQIQANLWNL 327
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 91 VKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLK 149
V Y+D E + K+F+G +PK++ E+++ +F YG + + +LR SKGC F+
Sbjct: 128 VTYSDKEPDPDNIKMFVGQIPKSMDESQLREMFEEYGPVHSINVLRDKATGISKGCCFVT 187
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ T+ AL A +A++ + G P+ +K AD+E + +
Sbjct: 188 FFTRRAALKAQDALHNVKTLAGMYHPIQMKPADSENRNERK 228
>gi|194861277|ref|XP_001969747.1| GG23780 [Drosophila erecta]
gi|190661614|gb|EDV58806.1| GG23780 [Drosophila erecta]
Length = 646
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/182 (46%), Positives = 124/182 (68%), Gaps = 1/182 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+PK E +L MF++F V +N+++DK T SRGCCFV +R+ A +A
Sbjct: 309 DNIKMFVGQIPKTWDETRLRQMFEQFGAVHTLNVLRDKVTSISRGCCFVTYYTRKAALRA 368
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A HN KTL G P+Q+K AD E R E KLF+GML K +EA+V LF+ +GTI++
Sbjct: 369 QDALHNIKTLDGMHHPIQMKPADSE-NRNERKLFVGMLNKKYTEADVRQLFTGHGTIEEC 427
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR SKGCAF+ + TK+ A+ A++A++ MEG S PLVVK+ADT+KE+ ++
Sbjct: 428 TVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 487
Query: 193 QK 194
Q+
Sbjct: 488 QQ 489
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG + K TEA + +F ++E +++D+ + S+GC FV ++
Sbjct: 391 DSENRNER-KLFVGMLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQ-SKGCAFVTFATK 448
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
Q A A+ A H +T+ G S+PL VK+AD + E+ + K+
Sbjct: 449 QNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 487
>gi|356521753|ref|XP_003529516.1| PREDICTED: flowering time control protein FCA-like [Glycine max]
Length = 737
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/251 (40%), Positives = 146/251 (58%), Gaps = 16/251 (6%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
KLFVG VP+ TE + +F+E V EV +IKDK T +GCCF+ + +EAD+A+
Sbjct: 86 AKLFVGSVPRTATEEDIRPLFEEHGNVIEVALIKDKKTGQHQGCCFIKYATSEEADQAIR 145
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG P+QV+YADGE ERL E+KLF+G L K + EV +FS YG ++D
Sbjct: 146 ALHNQHTLPGGVGPIQVRYADGERERLGAVEYKLFVGSLNKQATVKEVEEIFSKYGRVED 205
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+ ++R ++ S+GC F+KY ++ ALAA+ A+NG + M G PL+V++AD ++ RQ
Sbjct: 206 VYLMRDEKKQSRGCGFVKYSHRDMALAAINALNGIYTMRGCEQPLIVRFADPKRPRQGDS 265
Query: 192 AQKAQSQANNLPNAD---SQHPSLFGALPMG-YAPPYNGYGYQASGSYGLMQYRLPPMQN 247
A P D ++HPS PMG PP N + + L + P N
Sbjct: 266 RGLAFGGPGFGPRFDAPGTRHPSNI-TDPMGDRMPPSNAW-------HPLHPPNMGPSSN 317
Query: 248 QPGFHGIIPPV 258
GFHG+ P+
Sbjct: 318 A-GFHGMGSPL 327
>gi|255556436|ref|XP_002519252.1| Flowering time control protein FCA, putative [Ricinus communis]
gi|223541567|gb|EEF43116.1| Flowering time control protein FCA, putative [Ricinus communis]
Length = 811
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 82/176 (46%), Positives = 119/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
KLFVG VP+ +E + +F++ V EV +IKDK T +GCCFV + +EAD+A+
Sbjct: 161 AKLFVGSVPRTASEEDIRPLFEQHGNVIEVALIKDKRTGQQQGCCFVKYATSEEADRAIR 220
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG P+QV++ADGE ERL E+KLF+G L K +E EV +FS YG ++D
Sbjct: 221 ALHNQHTLPGGIGPIQVRFADGERERLGAVEYKLFVGSLNKQATEKEVEEIFSPYGHVED 280
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ ++R + S+GC F+KY ++E ALAA+ A+NG +KM G PL V++AD ++ R
Sbjct: 281 VYLMRDEMKQSRGCGFVKYSSREMALAAINALNGIYKMRGCDQPLTVRFADPKRPR 336
>gi|195435051|ref|XP_002065515.1| GK15495 [Drosophila willistoni]
gi|194161600|gb|EDW76501.1| GK15495 [Drosophila willistoni]
Length = 758
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/182 (46%), Positives = 124/182 (68%), Gaps = 1/182 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+PK E +L MF++F V +N+++DK T SRGCCFV +R+ A +A
Sbjct: 282 DNIKMFVGQIPKTWDETKLRRMFEQFGHVHTLNVLRDKVTSISRGCCFVTYYTRKAALRA 341
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A HN KTL G P+Q+K AD E R E KLF+GML K +EA+V LF+ +GTI++
Sbjct: 342 QDALHNIKTLDGMHHPIQMKPADSE-NRNERKLFVGMLNKKYTEADVRQLFTGHGTIEEC 400
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR SKGCAF+ + TK+ A+ A++A++ MEG S PLVVK+ADT+KE+ ++
Sbjct: 401 TVLRDQVGQSKGCAFVTFATKQNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 460
Query: 193 QK 194
Q+
Sbjct: 461 QQ 462
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG + K TEA + +F ++E +++D+ + S+GC FV ++
Sbjct: 364 DSENRNER-KLFVGMLNKKYTEADVRQLFTGHGTIEECTVLRDQVGQ-SKGCAFVTFATK 421
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
Q A A+ A H +T+ G S+PL VK+AD + E+ + K+
Sbjct: 422 QNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 460
>gi|405963038|gb|EKC28647.1| CUG-BP- and ETR-3-like factor 2 [Crassostrea gigas]
Length = 647
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 125/190 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ M E L MF+EF V ++N+++DK T S+GCCFV +R+ A A
Sbjct: 64 DAIKMFVGQIPRSMDENDLRKMFEEFGAVYQLNVLRDKATGQSKGCCFVTFYTRKAALDA 123
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
NA HN KT+ G P+Q+K AD E E KLF+GM+ K SE++V +F+ +G+I+D
Sbjct: 124 QNALHNIKTMSGMHHPIQMKPADSEKRNEERKLFVGMISKKCSESDVKMMFAPFGSIEDC 183
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
ILR S+GCAF+ Y ++ AL A++ ++ MEG S P+VVK+ADT+KE++A++
Sbjct: 184 TILRDQNGQSRGCAFVTYANRQSALNAIKNMHHSQTMEGCSSPVVVKFADTQKEKEAKKL 243
Query: 193 QKAQSQANNL 202
Q+ N+
Sbjct: 244 QQINQNLWNI 253
>gi|195035649|ref|XP_001989288.1| GH11645 [Drosophila grimshawi]
gi|193905288|gb|EDW04155.1| GH11645 [Drosophila grimshawi]
Length = 791
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 132/196 (67%), Gaps = 2/196 (1%)
Query: 2 AESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFV 61
AE K++ ++ +K+FVGQ+PK E +L +F++F V +N+++DK T SRGCCFV
Sbjct: 301 AELAKDQPDADN-IKMFVGQIPKTWDEIKLRCLFEQFGRVHTLNVLRDKVTSISRGCCFV 359
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSA 121
+R+ A +A +A HN KTL G P+Q+K AD E R E KLF+GML K +EA+V
Sbjct: 360 TYYTRKAALRAQDALHNIKTLDGMHHPIQMKPADSE-NRNERKLFVGMLNKKYTEADVRQ 418
Query: 122 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
LF+ +GTI++ +LR SKGCAF+ + TK+ A+ A+++++ MEG S PLVVK+A
Sbjct: 419 LFAGHGTIEECTVLRDQVGQSKGCAFVTFATKQNAIGAIKSLHQSQTMEGCSAPLVVKFA 478
Query: 182 DTEKERQARRAQKAQS 197
DT+KE+ ++ Q+ Q+
Sbjct: 479 DTQKEKDQKKMQQLQA 494
>gi|224112006|ref|XP_002316051.1| predicted protein [Populus trichocarpa]
gi|222865091|gb|EEF02222.1| predicted protein [Populus trichocarpa]
Length = 343
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 109/270 (40%), Positives = 150/270 (55%), Gaps = 41/270 (15%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG VP+ TE + +F+E V EV +IKDK T +GCCF+ + +EAD+A+ A
Sbjct: 89 KLFVGSVPRTATEMDIRPLFEEHGNVIEVALIKDKRTGQQQGCCFIKYATSEEADRAIRA 148
Query: 76 CHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
HN++TLPG P+QV+YADGE ERL E+KLF+G L K +E EV +F+ YG ++D+
Sbjct: 149 LHNQRTLPGGVGPIQVRYADGERERLGAVEYKLFVGSLNKQATEKEVEEIFTPYGRVEDV 208
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
++R + S+GC F+KY ++ ALAA+ +NG + M G PL V++AD ++ R
Sbjct: 209 YLMRDEMKQSRGCGFVKYSHRDMALAAINGLNGIYTMRGCEQPLTVRFADPKRPR----- 263
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQP-GF 251
P DS+ FG+ P G +QASG R PP P G
Sbjct: 264 ----------PGGDSRGGPAFGS-------PGAGPRFQASG------LRPPPNLGDPMGD 300
Query: 252 HGIIPPVNQGNAMRGASPDLSSNMGPRNYA 281
H IPP NA SP NMGP + A
Sbjct: 301 H--IPP----NAWLPMSP---QNMGPSSNA 321
>gi|320167253|gb|EFW44152.1| RNA binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 461
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 93/215 (43%), Positives = 134/215 (62%), Gaps = 8/215 (3%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E VKLFVGQVP+ M E L +F+EF V E+ I+KD+ +GC F+ SR+ A A
Sbjct: 47 EHVKLFVGQVPRTMEEKDLRPVFEEFGPVVELTILKDRFNGLHKGCAFLTYASRESAQLA 106
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+ A H + L G + PLQVK AD E + KLF+GM+ + SE E+ +F +YG I+D+
Sbjct: 107 MAALHGVRVLQGMAHPLQVKPADREEKAEARKLFLGMISRTASEDELRKVFEMYGDIEDI 166
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR TSKGCAF+KY +EQA+AA+ A++G+ M+G PL+VK+ADT++ER ++A
Sbjct: 167 AVLRQPDGTSKGCAFIKYRWREQAVAAISALHGRISMDGCPAPLIVKFADTDRERMQKKA 226
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGY 227
QK +L ++ H +GA MG NG+
Sbjct: 227 QK------HLMHSGHHHMGPYGA--MGGMAGMNGF 253
>gi|195148186|ref|XP_002015055.1| GL18624 [Drosophila persimilis]
gi|194107008|gb|EDW29051.1| GL18624 [Drosophila persimilis]
Length = 764
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/182 (46%), Positives = 124/182 (68%), Gaps = 1/182 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+PK E +L MF++F V +N+++DK T SRGCCFV +R+ A +A
Sbjct: 321 DNIKMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYTRKAALRA 380
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A HN KTL G P+Q+K AD E R E KLF+GML K +EA+V LF+ +GTI++
Sbjct: 381 QDALHNIKTLDGMHHPIQMKPADSE-NRNERKLFVGMLNKKYTEADVRQLFTGHGTIEEC 439
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR SKGCAF+ + TK+ A+ A+++++ MEG S PLVVK+ADT+KE+ ++
Sbjct: 440 TVLRDQAGQSKGCAFVTFATKQNAIGAIKSLHQSQTMEGCSAPLVVKFADTQKEKDQKKM 499
Query: 193 QK 194
Q+
Sbjct: 500 QQ 501
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG + K TEA + +F ++E +++D+ + S+GC FV ++
Sbjct: 403 DSENRNER-KLFVGMLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQ-SKGCAFVTFATK 460
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
Q A A+ + H +T+ G S+PL VK+AD + E+ + K+
Sbjct: 461 QNAIGAIKSLHQSQTMEGCSAPLVVKFADTQKEKDQKKM 499
>gi|356565014|ref|XP_003550740.1| PREDICTED: flowering time control protein FCA-like [Glycine max]
Length = 733
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 119/177 (67%), Gaps = 3/177 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
KLFVG VP+ +E + +F+E V EV +IKDK T +GCCF+ + +EAD+A+
Sbjct: 86 AKLFVGSVPRTASEEDIRPLFEEHGNVIEVALIKDKKTGQHQGCCFIKYATSEEADQAIR 145
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG P+QV+YADGE ERL E+KLF+G L K + EV +FS YG ++D
Sbjct: 146 ALHNQHTLPGGVGPIQVRYADGERERLGAVEYKLFVGSLNKQATVKEVEEIFSKYGRVED 205
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
+ ++R ++ S+GC F+KY ++ ALAA+ A+NG + M G PL+V++AD ++ RQ
Sbjct: 206 VYLMRDEKKQSRGCGFVKYSHRDMALAAINALNGIYTMRGCEQPLIVRFADPKRPRQ 262
>gi|432858764|ref|XP_004068927.1| PREDICTED: CUGBP Elav-like family member 4-like [Oryzias latipes]
Length = 505
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 123/188 (65%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R+ A
Sbjct: 47 DHDAIKLFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESAL 106
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA NA H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G+I+
Sbjct: 107 KAQNALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFESFGSIE 166
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 167 ECTILRGPDGNSKGCAFVKYSSHAEAQAAISALHGSQTMPGASSSLVVKFADTDKERTIR 226
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 227 RMQQMAGQ 234
>gi|60459259|gb|AAX20016.1| FCA gamma [Pisum sativum]
Length = 743
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 101/260 (38%), Positives = 146/260 (56%), Gaps = 36/260 (13%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
KLFVG VP+ TE + +F+E V EV +IKD+ T +GCCF+ + +EAD+A+
Sbjct: 91 AKLFVGSVPRTATEEDIRPLFEEHGNVIEVALIKDRKTGQHQGCCFIKYATSEEADQAIR 150
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG P+QV+YADGE ERL E+KLF+G L K EV +FS YG ++D
Sbjct: 151 ALHNQHTLPGGVGPIQVRYADGERERLGAVEYKLFVGSLNKQALVKEVEEVFSKYGRVED 210
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+ ++R ++ S+GC F+KY ++ ALAA+ +NG + M G PL+V++AD ++ RQ
Sbjct: 211 VYLMRDDKKQSRGCGFVKYSHRDMALAAINGLNGIYTMRGCDQPLIVRFADPKRPRQ--- 267
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQ-ASGSYGLMQYRLPPMQ---- 246
DS+ P L A G+ P + G + S + M R+PP
Sbjct: 268 -------------GDSRGPVLGAA---GFGPRLDAPGTRLPSNNSDPMGDRMPPPNAWRP 311
Query: 247 -NQP--------GFHGIIPP 257
+QP GFHG+ PP
Sbjct: 312 IHQPNTGPSFNAGFHGMGPP 331
>gi|348508140|ref|XP_003441613.1| PREDICTED: CUGBP Elav-like family member 4-like [Oreochromis
niloticus]
Length = 524
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 123/188 (65%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R+ A
Sbjct: 47 DHDAIKLFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESAL 106
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA NA H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G+I+
Sbjct: 107 KAQNALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFESFGSIE 166
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 167 ECTILRGPDGNSKGCAFVKYSSHAEAQAAISALHGSQTMPGASSSLVVKFADTDKERTIR 226
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 227 RMQQMAGQ 234
>gi|7670536|dbj|BAA95118.1| Etr-1 [Danio rerio]
Length = 452
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/186 (46%), Positives = 128/186 (68%), Gaps = 1/186 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLF+GQ+P+++ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
NA H +KTLPG + P+QVK AD E R + KLF+GML K +S+A+V +F +G+I++
Sbjct: 65 QNALHEQKTLPGMNRPIQVKPADSE-GRGDRKLFVGMLGKQLSDADVRKMFEPFGSIEEC 123
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG SKGCAF+KY++ +A AA+ A++G + G+S LVVK+ADTEKER RR
Sbjct: 124 TVLRGPDGASKGCAFVKYQSNAEAQAAISALHGSRTLPGASSSLVVKFADTEKERGIRRM 183
Query: 193 QKAQSQ 198
Q+ SQ
Sbjct: 184 QQVASQ 189
>gi|42476252|ref|NP_571569.2| CUGBP Elav-like family member 3 [Danio rerio]
gi|152013393|sp|Q9IBD1.2|CELF3_DANRE RecName: Full=CUGBP Elav-like family member 3; Short=CELF-3;
AltName: Full=Bruno-like protein 1; AltName:
Full=CUG-BP- and ETR-3-like factor 3; AltName:
Full=ELAV-type RNA-binding protein 1; Short=ETR-1;
AltName: Full=RNA-binding protein BRUNOL-1; AltName:
Full=Trinucleotide repeat-containing gene 4 protein
gi|38173873|gb|AAH60923.1| Trinucleotide repeat containing 4 [Danio rerio]
Length = 452
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/186 (46%), Positives = 128/186 (68%), Gaps = 1/186 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLF+GQ+P+++ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
NA H +KTLPG + P+QVK AD E R + KLF+GML K +S+A+V +F +G+I++
Sbjct: 65 QNALHEQKTLPGMNRPIQVKPADSE-GRGDRKLFVGMLGKQLSDADVRKMFEPFGSIEEC 123
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG SKGCAF+KY++ +A AA+ A++G + G+S LVVK+ADTEKER RR
Sbjct: 124 TVLRGPDGASKGCAFVKYQSNAEAQAAISALHGSRTLPGASSSLVVKFADTEKERGIRRM 183
Query: 193 QKAQSQ 198
Q+ SQ
Sbjct: 184 QQVASQ 189
>gi|449462184|ref|XP_004148821.1| PREDICTED: flowering time control protein FCA-like [Cucumis
sativus]
gi|449511891|ref|XP_004164081.1| PREDICTED: flowering time control protein FCA-like [Cucumis
sativus]
Length = 675
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/176 (47%), Positives = 115/176 (65%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
KLFVG VP+ TE + +F+E V EV +IKDK T +GCCFV + +EAD+A+
Sbjct: 52 AKLFVGSVPRTATEEIIRPLFEEHGNVIEVALIKDKRTGQQQGCCFVKYTTSEEADRAIR 111
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
HN+ TLPG P+QV+YADGE ERL E+KLF+G L K SE EV +FS YG ++D
Sbjct: 112 NLHNQHTLPGGVGPIQVRYADGERERLGAVEYKLFVGSLNKQASEKEVKEIFSPYGVVED 171
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ ++R + S+GC F+KY ++ ALAA+ A+NG M G PL V++AD +K R
Sbjct: 172 VYLMRDEMKQSRGCGFVKYSHRDMALAAINALNGIFTMRGCDQPLSVRFADPKKPR 227
>gi|321460482|gb|EFX71524.1| hypothetical protein DAPPUDRAFT_227924 [Daphnia pulex]
Length = 403
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 131/211 (62%), Gaps = 12/211 (5%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ M E L MF+++ V +VN+++DK + S+GCCFV R++A +A
Sbjct: 12 DAIKMFVGQIPRSMDENDLRKMFEDYGQVHQVNVLRDKISGQSKGCCFVTFYKRKDALQA 71
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
N HN KTL G P+Q+K AD E R E KLF+GML K +SE +V +FS YG+I++
Sbjct: 72 QNDMHNIKTLSGMHHPIQMKPADSE-NRNERKLFVGMLSKKISENDVRIMFSAYGSIEEC 130
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR + S+GCAF+ + +++ A+ A++ ++ MEG S P+VVK+ADT+KE+ +R
Sbjct: 131 TVLRDNNNISRGCAFVTFTSRQSAVTAIKTVHHSQTMEGCSSPMVVKFADTQKEKDQKRV 190
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPP 223
S N L+G + + PP
Sbjct: 191 HHVGSTTN-----------LWGGIGINNLPP 210
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG + K ++E + MF + ++E +++D SRGC FV SR
Sbjct: 94 DSENRNER-KLFVGMLSKKISENDVRIMFSAYGSIEECTVLRDNNN-ISRGCAFVTFTSR 151
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
Q A A+ H+ +T+ G SSP+ VK+AD + E+ + ++
Sbjct: 152 QSAVTAIKTVHHSQTMEGCSSPMVVKFADTQKEKDQKRV 190
>gi|410921168|ref|XP_003974055.1| PREDICTED: CUGBP Elav-like family member 5-like isoform 4 [Takifugu
rubripes]
Length = 471
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/229 (39%), Positives = 137/229 (59%), Gaps = 17/229 (7%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
++ +KLF+GQ+P+++ E L +F++F + E+ ++KD+ T +GC F+ +R+ A
Sbjct: 74 DQDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESAI 133
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA NA H +KTLPG + P+QVK AD E + KLF+GML K +E +V LF YG I+
Sbjct: 134 KAQNALHEQKTLPGMTRPIQVKPADSESRGEDRKLFVGMLNKQQTEEDVYRLFEPYGVIE 193
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LRG SKGCAF+K+ T +A +A+ A++G M G+S LVVK+ADT+KER R
Sbjct: 194 ECTVLRGPDGNSKGCAFVKFSTHTEAQSAISALHGSQTMPGASSSLVVKFADTDKERTIR 253
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQ 239
R Q+ Q FG A P++ Y +S ++ LMQ
Sbjct: 254 RMQQMVGQ--------------FGIFNPAIALPFSTY---SSYAHALMQ 285
>gi|410921166|ref|XP_003974054.1| PREDICTED: CUGBP Elav-like family member 5-like isoform 3 [Takifugu
rubripes]
Length = 491
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/229 (39%), Positives = 137/229 (59%), Gaps = 17/229 (7%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
++ +KLF+GQ+P+++ E L +F++F + E+ ++KD+ T +GC F+ +R+ A
Sbjct: 74 DQDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESAI 133
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA NA H +KTLPG + P+QVK AD E + KLF+GML K +E +V LF YG I+
Sbjct: 134 KAQNALHEQKTLPGMTRPIQVKPADSESRGEDRKLFVGMLNKQQTEEDVYRLFEPYGVIE 193
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LRG SKGCAF+K+ T +A +A+ A++G M G+S LVVK+ADT+KER R
Sbjct: 194 ECTVLRGPDGNSKGCAFVKFSTHTEAQSAISALHGSQTMPGASSSLVVKFADTDKERTIR 253
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQ 239
R Q+ Q FG A P++ Y +S ++ LMQ
Sbjct: 254 RMQQMVGQ--------------FGIFNPAIALPFSTY---SSYAHALMQ 285
>gi|348527714|ref|XP_003451364.1| PREDICTED: CUGBP Elav-like family member 5-like [Oreochromis
niloticus]
Length = 529
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/229 (39%), Positives = 137/229 (59%), Gaps = 17/229 (7%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
++ +KLF+GQ+P+++ E L +F++F + E+ ++KD+ T +GC F+ +R+ A
Sbjct: 74 DQDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESAI 133
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA NA H +KTLPG + P+QVK AD E + KLF+GML K +E +V LF YG I+
Sbjct: 134 KAQNALHEQKTLPGMTRPIQVKPADSESRGEDRKLFVGMLNKQQTEEDVYRLFEPYGVIE 193
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LRG SKGCAF+K+ T +A +A+ A++G M G+S LVVK+ADT+KER R
Sbjct: 194 ECTVLRGPDGNSKGCAFVKFSTHTEAQSAISALHGSQTMPGASSSLVVKFADTDKERTIR 253
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQ 239
R Q+ Q FG A P++ Y +S ++ LMQ
Sbjct: 254 RMQQMVGQ--------------FGIFNPAIALPFSTY---SSYAHALMQ 285
>gi|410921162|ref|XP_003974052.1| PREDICTED: CUGBP Elav-like family member 5-like isoform 1 [Takifugu
rubripes]
Length = 528
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/229 (39%), Positives = 137/229 (59%), Gaps = 17/229 (7%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
++ +KLF+GQ+P+++ E L +F++F + E+ ++KD+ T +GC F+ +R+ A
Sbjct: 74 DQDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESAI 133
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA NA H +KTLPG + P+QVK AD E + KLF+GML K +E +V LF YG I+
Sbjct: 134 KAQNALHEQKTLPGMTRPIQVKPADSESRGEDRKLFVGMLNKQQTEEDVYRLFEPYGVIE 193
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LRG SKGCAF+K+ T +A +A+ A++G M G+S LVVK+ADT+KER R
Sbjct: 194 ECTVLRGPDGNSKGCAFVKFSTHTEAQSAISALHGSQTMPGASSSLVVKFADTDKERTIR 253
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQ 239
R Q+ Q FG A P++ Y +S ++ LMQ
Sbjct: 254 RMQQMVGQ--------------FGIFNPAIALPFSTY---SSYAHALMQ 285
>gi|363744106|ref|XP_003642975.1| PREDICTED: CUGBP, Elav-like family member 4 [Gallus gallus]
Length = 445
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 48 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 107
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 108 KAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 167
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 168 ECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 227
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 228 RMQQMAGQ 235
>gi|395822988|ref|XP_003784783.1| PREDICTED: CUGBP Elav-like family member 4 isoform 2 [Otolemur
garnettii]
Length = 448
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 169
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 170 ECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 229
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 230 RMQQMAGQ 237
>gi|350586085|ref|XP_003127952.3| PREDICTED: CUGBP, Elav-like family member 4 [Sus scrofa]
Length = 448
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 169
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 170 ECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 229
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 230 RMQQMAGQ 237
>gi|187761303|ref|NP_001020260.1| CUGBP Elav-like family member 4 isoform 4 [Homo sapiens]
gi|397520310|ref|XP_003830263.1| PREDICTED: CUGBP Elav-like family member 4 isoform 2 [Pan paniscus]
gi|426385816|ref|XP_004059397.1| PREDICTED: CUGBP Elav-like family member 4 isoform 1 [Gorilla
gorilla gorilla]
gi|28279033|gb|AAH45711.1| BRUNOL4 protein [Homo sapiens]
Length = 448
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 169
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 170 ECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 229
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 230 RMQQMAGQ 237
>gi|344269052|ref|XP_003406369.1| PREDICTED: CUGBP Elav-like family member 4-like isoform 3
[Loxodonta africana]
Length = 448
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 169
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 170 ECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 229
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 230 RMQQMAGQ 237
>gi|212286102|ref|NP_001131056.1| CUGBP, Elav-like family member 5 [Xenopus laevis]
gi|197359138|gb|ACH69785.1| RNA binding protein Bruno-like 5 [Xenopus laevis]
Length = 484
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/216 (42%), Positives = 136/216 (62%), Gaps = 11/216 (5%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E+ ++KD+ T +GC F+ +R A KA
Sbjct: 44 DAIKLFVGQIPRNLEEKDLKPLFEQFGKIYELTVLKDRYTGMHKGCAFLTYCARDSAIKA 103
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A H +KTLPG + P+QVK AD E + KLF+GML K SE EV+++F +G+I++
Sbjct: 104 QTALHEQKTLPGMARPIQVKPADSESRGGDRKLFVGMLSKQQSEEEVTSMFQAFGSIEEC 163
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG +SKGCAF+K+ + +A AA++A++G M G+S LVVK+ADT+KER RR
Sbjct: 164 SVLRGPDGSSKGCAFVKFSSHAEAQAAIQALHGSQTMPGASSSLVVKFADTDKERTLRRM 223
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 228
Q+ Q PSL ALP+ PY+ Y
Sbjct: 224 QQMVGQLGIF------TPSL--ALPIS---PYSAYA 248
>gi|269785109|ref|NP_001161510.1| bruno-like protein [Saccoglossus kowalevskii]
gi|268053989|gb|ACY92481.1| bruno-like protein [Saccoglossus kowalevskii]
Length = 485
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/185 (44%), Positives = 125/185 (67%), Gaps = 1/185 (0%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+++ E L +F+E+ + E+ ++KD+ T +GC F+ R A
Sbjct: 32 DHDAIKLFVGQIPRNLEEKDLRPLFEEYGRIYELTVLKDRFTGMHKGCAFLTYCDRDSAL 91
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
+A +A H +KTLPG + P+QVK AD E + KLF+GML K ++E +V A+F +G I+
Sbjct: 92 RAQSALHEQKTLPGMNRPIQVKPADSESRAEDRKLFVGMLNKQMTEDDVRAIFQPFGKIE 151
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM-EGSSVPLVVKWADTEKERQA 189
+ ILRG SKGCAF+K+ +K++ALAA+ ING + +G+S +VVK+ADTEKERQ
Sbjct: 152 ECTILRGPDGVSKGCAFVKFGSKQEALAAINNINGSRTLPQGASSAIVVKFADTEKERQI 211
Query: 190 RRAQK 194
RR Q+
Sbjct: 212 RRMQQ 216
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 60/100 (60%), Gaps = 2/100 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ +S E KLFVG + K MTE + A+F+ F ++E I++ S+GC FV S+
Sbjct: 116 DSESRAEDRKLFVGMLNKQMTEDDVRAIFQPFGKIEECTILRGPDG-VSKGCAFVKFGSK 174
Query: 67 QEADKAVNACHNKKTLP-GASSPLQVKYADGELERLEHKL 105
QEA A+N + +TLP GASS + VK+AD E ER ++
Sbjct: 175 QEALAAINNINGSRTLPQGASSAIVVKFADTEKERQIRRM 214
>gi|147902406|ref|NP_001090639.1| CUGBP Elav-like family member 5 [Xenopus (Silurana) tropicalis]
gi|152013396|sp|A0JM51.1|CELF5_XENTR RecName: Full=CUGBP Elav-like family member 5; Short=CELF-5;
AltName: Full=Bruno-like protein 5; AltName:
Full=CUG-BP- and ETR-3-like factor 5; AltName:
Full=RNA-binding protein BRUNOL-5
gi|117558445|gb|AAI25740.1| brunol5 protein [Xenopus (Silurana) tropicalis]
Length = 486
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/216 (42%), Positives = 136/216 (62%), Gaps = 11/216 (5%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E+ ++KD+ T +GC F+ +R A KA
Sbjct: 45 DAIKLFVGQIPRNLEEKDLKPLFEQFGKIYELTVLKDRYTGMHKGCAFLTYCARDSAIKA 104
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A H +KTLPG + P+QVK AD E + KLF+GML K SE EV+++F +G+I++
Sbjct: 105 QTALHEQKTLPGMARPIQVKPADSESRGGDRKLFVGMLSKQQSEEEVTSMFQAFGSIEEC 164
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG +SKGCAF+K+ + +A AA++A++G M G+S LVVK+ADT+KER RR
Sbjct: 165 SVLRGPDGSSKGCAFVKFSSHAEAQAAIQALHGSQTMPGASSSLVVKFADTDKERTLRRM 224
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 228
Q+ Q PSL ALP+ PY+ Y
Sbjct: 225 QQMVGQLGIF------TPSL--ALPIS---PYSAYA 249
>gi|443691317|gb|ELT93212.1| hypothetical protein CAPTEDRAFT_183838 [Capitella teleta]
Length = 462
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 86/182 (47%), Positives = 120/182 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R A KA
Sbjct: 15 DAIKLFVGQIPRNLEEKDLRPIFEEFGQIYELTVLKDRFTGMHKGCAFLTYCARDSALKA 74
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A H +KTLPG + P+QVK AD E + KLF+GML K SE EV +FS YG+I++
Sbjct: 75 QQALHEQKTLPGMNRPIQVKPADSESRAEDRKLFVGMLNKQQSEEEVRQMFSPYGSIEEC 134
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
ILR SKGCAF+K+ T A AA+ A++G M G+S LVVK+ADTEKERQ R+
Sbjct: 135 TILRDQNGNSKGCAFVKFTTHADAQAAINALHGSQTMPGASSSLVVKFADTEKERQLRKM 194
Query: 193 QK 194
Q+
Sbjct: 195 QQ 196
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ +S E KLFVG + K +E ++ MF + ++E I++D+ S+GC FV +
Sbjct: 97 DSESRAEDRKLFVGMLNKQQSEEEVRQMFSPYGSIEECTILRDQNGN-SKGCAFVKFTTH 155
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+A A+NA H +T+PGASS L VK+AD E ER K+
Sbjct: 156 ADAQAAINALHGSQTMPGASSSLVVKFADTEKERQLRKM 194
>gi|387542960|gb|AFJ72107.1| CUGBP Elav-like family member 4 isoform 4 [Macaca mulatta]
Length = 447
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 121/188 (64%), Gaps = 1/188 (0%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARDSAI 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA A H +KTLPG + P+QVK AD E R + KLF+GML K SE +V LF +G I+
Sbjct: 110 KAQTALHEQKTLPGMARPIQVKPADSE-SRGDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 168
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 169 ECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 228
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 229 RMQQMAGQ 236
>gi|363744104|ref|XP_003642974.1| PREDICTED: CUGBP, Elav-like family member 4 [Gallus gallus]
Length = 491
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 48 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 107
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 108 KAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 167
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 168 ECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 227
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 228 RMQQMAGQ 235
>gi|195546832|ref|NP_001124260.1| CUGBP Elav-like family member 5 [Danio rerio]
gi|190339155|gb|AAI63416.1| Brunol5 protein [Danio rerio]
Length = 528
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 90/229 (39%), Positives = 137/229 (59%), Gaps = 17/229 (7%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
++ +KLF+GQ+P+++ E L +F++F + E+ ++KD+ T +GC F+ +R+ A
Sbjct: 74 DQDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESAI 133
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA NA H +KTLPG + P+QVK AD E + KLF+GML K +E +V LF YG I+
Sbjct: 134 KAQNALHEQKTLPGMTRPIQVKPADSESRGEDRKLFVGMLNKQQTEEDVYRLFEPYGVIE 193
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LRG SKGCAF+K+ T +A +A+ A++G M G+S LVVK+ADT+KER R
Sbjct: 194 ECTVLRGPDGNSKGCAFVKFSTHAEAQSAISALHGSQTMPGASSSLVVKFADTDKERTIR 253
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQ 239
R Q+ Q FG A P++ Y ++ ++ LMQ
Sbjct: 254 RMQQMVGQ--------------FGIFNPAIALPFSTY---STYAHALMQ 285
>gi|348529973|ref|XP_003452486.1| PREDICTED: CUGBP Elav-like family member 3-like [Oreochromis
niloticus]
Length = 453
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 127/186 (68%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLF+GQ+P+++ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
NA H +KTLPG + P+QVK AD E + KLF+GML K ++A+V +F +G+I++
Sbjct: 65 QNALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDADVRKMFEPFGSIEEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K+++ +A AA+ A++G + G+S LVVK+AD+EKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQSNAEAQAAINALHGSRTLPGASSSLVVKFADSEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ SQ
Sbjct: 185 QQVASQ 190
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 58/96 (60%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+A + MF+ F ++E +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDADVRKMFEPFGSIEECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S EA A+NA H +TLPGASS L VK+AD E ER
Sbjct: 144 SNAEAQAAINALHGSRTLPGASSSLVVKFADSEKER 179
>gi|363744101|ref|XP_003642973.1| PREDICTED: CUGBP, Elav-like family member 4 [Gallus gallus]
Length = 472
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 48 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 107
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 108 KAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 167
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 168 ECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 227
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 228 RMQQMAGQ 235
>gi|75075903|sp|Q4R535.1|CELF4_MACFA RecName: Full=CUGBP Elav-like family member 4; Short=CELF-4;
AltName: Full=Bruno-like protein 4; AltName:
Full=CUG-BP- and ETR-3-like factor 4; AltName:
Full=RNA-binding protein BRUNOL-4
gi|67970896|dbj|BAE01790.1| unnamed protein product [Macaca fascicularis]
Length = 474
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 122/188 (64%), Gaps = 1/188 (0%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E R + KLF+GML K SE +V LF +G I+
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSE-SRGDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 168
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 169 ECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 228
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 229 RMQQMAGQ 236
>gi|363744110|ref|XP_003642977.1| PREDICTED: CUGBP, Elav-like family member 4 [Gallus gallus]
Length = 465
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 48 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 107
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 108 KAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 167
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 168 ECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 227
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 228 RMQQMAGQ 235
>gi|207028397|ref|NP_001128708.1| CUGBP, Elav-like family member 4 [Xenopus laevis]
gi|197359136|gb|ACH69784.1| RNA binding protein Bruno-like 4 [Xenopus laevis]
Length = 471
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 48 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 107
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 108 KAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 167
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 168 ECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 227
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 228 RMQQMAGQ 235
>gi|118103583|ref|XP_424495.2| PREDICTED: CUGBP, Elav-like family member 4 isoform 3 [Gallus
gallus]
Length = 492
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 48 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 107
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 108 KAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 167
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 168 ECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 227
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 228 RMQQMAGQ 235
>gi|332849799|ref|XP_512100.3| PREDICTED: CUGBP, Elav-like family member 4 [Pan troglodytes]
gi|194379036|dbj|BAG58069.1| unnamed protein product [Homo sapiens]
Length = 454
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 122/188 (64%), Gaps = 1/188 (0%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E R + KLF+GML K SE +V LF +G I+
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSE-SRGDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 168
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 169 ECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 228
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 229 RMQQMAGQ 236
>gi|189241911|ref|XP_971057.2| PREDICTED: similar to bruno-3 CG12478-PA [Tribolium castaneum]
Length = 569
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 123/189 (65%), Gaps = 1/189 (0%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ + + +KLFVGQ+P+H+ E L MF+EF + E ++KDK T +GC F+ S
Sbjct: 116 QANGNRDVIKLFVGQIPRHLEEDDLRPMFEEFGKIYEFTVLKDKYTGMHKGCAFLTYFSP 175
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSI 125
+ A A NA H K TLPG + P+QVK AD E + KLF+GML K +E +V LF+
Sbjct: 176 ESALNAQNALHEKHTLPGMNRPIQVKPADSENRGGKDRKLFVGMLSKQQTEEDVRQLFAP 235
Query: 126 YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
+GTI++ ILRG SKGCAF+KY + ++A AA+ +++G M G+S LVVK+ADTEK
Sbjct: 236 FGTIEECTILRGPDGASKGCAFVKYSSHQEAQAAINSLHGSQTMPGASSSLVVKFADTEK 295
Query: 186 ERQARRAQK 194
ERQ RR Q+
Sbjct: 296 ERQLRRMQQ 304
>gi|118103585|ref|XP_001231286.1| PREDICTED: CUGBP, Elav-like family member 4 isoform 1 [Gallus
gallus]
Length = 504
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 48 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 107
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 108 KAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 167
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 168 ECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 227
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 228 RMQQMAGQ 235
>gi|395510718|ref|XP_003759619.1| PREDICTED: CUGBP Elav-like family member 4-like [Sarcophilus
harrisii]
Length = 453
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 49 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 108
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 109 KAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 168
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 169 ECTILRGPDGNSKGCAFVKYSSHVEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 228
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 229 RMQQMAGQ 236
>gi|449514107|ref|XP_002187309.2| PREDICTED: CUGBP, Elav-like family member 4 isoform 1 [Taeniopygia
guttata]
Length = 492
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 122/188 (64%), Gaps = 1/188 (0%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 48 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 107
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E R + KLF+GML K SE +V LF +G I+
Sbjct: 108 KAQSALHEQKTLPGMNRPIQVKPADSE-SRGDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 166
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 167 ECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 226
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 227 RMQQMAGQ 234
>gi|183637597|gb|ACC64599.1| trinucleotide repeat containing 4 (predicted) [Rhinolophus
ferrumequinum]
Length = 459
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ SQ
Sbjct: 185 QQVASQ 190
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
>gi|226371663|ref|NP_001139766.1| CUGBP Elav-like family member 4 isoform C [Mus musculus]
gi|27753638|gb|AAO22167.1| bruno-like 4 protein [Mus musculus]
Length = 495
Score = 174 bits (440), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 122/188 (64%), Gaps = 1/188 (0%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E R + KLF+GML K SE +V LF +G I+
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSE-SRGDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 168
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 169 ECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 228
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 229 RMQQMAGQ 236
>gi|50540190|ref|NP_001002562.1| CUGBP Elav-like family member 4 [Danio rerio]
gi|82235921|sp|Q6DGV1.1|CELF4_DANRE RecName: Full=CUGBP Elav-like family member 4; Short=CELF-4;
AltName: Full=Bruno-like protein 4; AltName:
Full=CUG-BP- and ETR-3-like factor 4; AltName:
Full=RNA-binding protein BRUNOL-4
gi|49904554|gb|AAH76238.1| Zgc:92761 [Danio rerio]
Length = 520
Score = 174 bits (440), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R+ A
Sbjct: 43 DHDAIKLFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESAL 102
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA A H +KTLPG + P+QVK AD E + KLF+GML K E +V LF +G+I+
Sbjct: 103 KAQTALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQCEDDVRRLFESFGSIE 162
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY T +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 163 ECTILRGPDGNSKGCAFVKYSTHAEAQAAISALHGSQTMPGASSSLVVKFADTDKERTIR 222
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 223 RMQQMAGQ 230
>gi|149944693|ref|NP_001092538.1| CUGBP Elav-like family member 4 [Bos taurus]
gi|148878073|gb|AAI46143.1| BRUNOL4 protein [Bos taurus]
gi|296473867|tpg|DAA15982.1| TPA: CUG-BP- and ETR-3-like factor 4 [Bos taurus]
Length = 475
Score = 174 bits (440), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 122/188 (64%), Gaps = 1/188 (0%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E R + KLF+GML K SE +V LF +G I+
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSE-SRGDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 168
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 169 ECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 228
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 229 RMQQMAGQ 236
>gi|380792869|gb|AFE68310.1| CUGBP Elav-like family member 3 isoform 1, partial [Macaca mulatta]
Length = 368
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
>gi|148664598|gb|EDK97014.1| bruno-like 4, RNA binding protein (Drosophila), isoform CRA_e [Mus
musculus]
Length = 501
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 122/188 (64%), Gaps = 1/188 (0%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 56 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E R + KLF+GML K SE +V LF +G I+
Sbjct: 116 KAQSALHEQKTLPGMNRPIQVKPADSE-SRGDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 174
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 175 ECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 234
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 235 RMQQMAGQ 242
>gi|351702706|gb|EHB05625.1| CUG-BP- and ETR-3-like factor 3 [Heterocephalus glaber]
Length = 381
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
>gi|344269048|ref|XP_003406367.1| PREDICTED: CUGBP Elav-like family member 4-like isoform 1
[Loxodonta africana]
Length = 447
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 3 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 62
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 63 KAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 122
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 123 ECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 182
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 183 RMQQMAGQ 190
>gi|431896648|gb|ELK06060.1| CUG-BP- and ETR-3-like factor 3 [Pteropus alecto]
Length = 419
Score = 173 bits (439), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 123/186 (66%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARESALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
>gi|359477208|ref|XP_002279515.2| PREDICTED: flowering time control protein FCA [Vitis vinifera]
Length = 785
Score = 173 bits (439), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 79/176 (44%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
KLFVG VP+ TE + +F+E V EV +IKDK T +GCCF+ + +EA++A+
Sbjct: 118 AKLFVGSVPRTATEEDIRPLFEEHGNVLEVALIKDKRTGQQQGCCFIKYATSEEAERAIR 177
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG P+QV+YADGE ERL E+KLF+G L K +E EV +FS YG ++D
Sbjct: 178 ALHNQYTLPGGVGPIQVRYADGERERLGAVEYKLFVGSLNKQATEKEVKEIFSPYGQVED 237
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ ++R + S+GC F+K+ ++ A+AA+ A+NG + M G PL V++AD ++ R
Sbjct: 238 VYLMRDELKQSRGCGFVKFSHRDMAMAAINALNGIYTMRGCDQPLTVRFADPKRPR 293
>gi|432908655|ref|XP_004077968.1| PREDICTED: CUGBP Elav-like family member 3-like [Oryzias latipes]
Length = 457
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 90/215 (41%), Positives = 133/215 (61%), Gaps = 12/215 (5%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFVGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V LF +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQTDEDVRRLFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++ +A AA+ +++G M G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQGHAEAQAAINSLHGSRTMPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGY 227
Q+ SQ +F + + + P YN Y
Sbjct: 185 QQVASQLG-----------IFSPMTLNF-PAYNAY 207
>gi|301767880|ref|XP_002919375.1| PREDICTED: CUGBP Elav-like family member 3-like [Ailuropoda
melanoleuca]
Length = 461
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
>gi|9246977|gb|AAF86232.1|AF248650_1 RNA-binding protein BRUNOL4 [Homo sapiens]
Length = 294
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 121/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A KA
Sbjct: 52 DAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKA 111
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I++
Sbjct: 112 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIEEC 171
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 172 TILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRM 231
Query: 193 QKAQSQ 198
Q+ Q
Sbjct: 232 QQMAGQ 237
>gi|359321739|ref|XP_003639689.1| PREDICTED: CUGBP Elav-like family member 3-like isoform 1 [Canis
lupus familiaris]
Length = 462
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
>gi|71164894|ref|NP_009116.3| CUGBP Elav-like family member 3 isoform 1 [Homo sapiens]
gi|149751259|ref|XP_001492746.1| PREDICTED: CUGBP, Elav-like family member 3 isoform 1 [Equus
caballus]
gi|74756184|sp|Q5SZQ8.1|CELF3_HUMAN RecName: Full=CUGBP Elav-like family member 3; Short=CELF-3;
AltName: Full=Bruno-like protein 1; AltName: Full=CAG
repeat protein 4; AltName: Full=CUG-BP- and ETR-3-like
factor 3; AltName: Full=ELAV-type RNA-binding protein 1;
Short=ETR-1; AltName: Full=Expanded repeat domain
protein CAG/CTG 4; AltName: Full=RNA-binding protein
BRUNOL-1; AltName: Full=Trinucleotide repeat-containing
gene 4 protein
gi|85397642|gb|AAI04759.1| Trinucleotide repeat containing 4 [Homo sapiens]
gi|119573806|gb|EAW53421.1| trinucleotide repeat containing 4, isoform CRA_c [Homo sapiens]
gi|168278104|dbj|BAG11030.1| trinucleotide repeat-containing 4 protein [synthetic construct]
Length = 465
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
>gi|355558428|gb|EHH15208.1| hypothetical protein EGK_01267 [Macaca mulatta]
Length = 469
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
>gi|348586638|ref|XP_003479075.1| PREDICTED: CUGBP Elav-like family member 3-like isoform 1 [Cavia
porcellus]
Length = 463
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
>gi|350583381|ref|XP_003481499.1| PREDICTED: CUGBP, Elav-like family member 3 isoform 1 [Sus scrofa]
gi|397492758|ref|XP_003817287.1| PREDICTED: CUGBP Elav-like family member 3 isoform 1 [Pan paniscus]
gi|426331463|ref|XP_004026700.1| PREDICTED: CUGBP Elav-like family member 3 isoform 1 [Gorilla
gorilla gorilla]
Length = 464
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
>gi|284005526|ref|NP_001164779.1| CUGBP Elav-like family member 3 [Oryctolagus cuniculus]
gi|217030863|gb|ACJ74025.1| trinucleotide repeat containing 4 (predicted) [Oryctolagus
cuniculus]
Length = 466
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
>gi|281182934|ref|NP_001162429.1| CUGBP Elav-like family member 3 [Papio anubis]
gi|163781027|gb|ABY40803.1| trinucleotide repeat containing 4 (predicted) [Papio anubis]
Length = 471
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
>gi|116003913|ref|NP_001070313.1| CUGBP Elav-like family member 3 [Bos taurus]
gi|122132428|sp|Q08E07.1|CELF3_BOVIN RecName: Full=CUGBP Elav-like family member 3; Short=CELF-3;
AltName: Full=Bruno-like protein 1; AltName:
Full=CUG-BP- and ETR-3-like factor 3; AltName:
Full=ELAV-type RNA-binding protein 1; Short=ETR-1;
AltName: Full=RNA-binding protein BRUNOL-1; AltName:
Full=Trinucleotide repeat-containing gene 4 protein
gi|115305254|gb|AAI23481.1| Trinucleotide repeat containing 4 [Bos taurus]
gi|296489556|tpg|DAA31669.1| TPA: CUG-BP- and ETR-3-like factor 3 [Bos taurus]
Length = 461
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
>gi|157821951|ref|NP_001102660.1| CUG-BP- and ETR-3-like factor 3 [Rattus norvegicus]
gi|149030747|gb|EDL85784.1| similar to trinucleotide repeat containing 4 (predicted), isoform
CRA_c [Rattus norvegicus]
Length = 473
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
>gi|395855962|ref|XP_003800412.1| PREDICTED: CUGBP Elav-like family member 3 [Otolemur garnettii]
Length = 475
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
>gi|363744108|ref|XP_003642976.1| PREDICTED: CUGBP, Elav-like family member 4 [Gallus gallus]
Length = 454
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 48 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 107
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 108 KAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIE 167
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 168 ECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 227
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 228 RMQQMAGQ 235
>gi|410968366|ref|XP_003990678.1| PREDICTED: CUGBP Elav-like family member 3 isoform 1 [Felis catus]
Length = 463
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
>gi|348526886|ref|XP_003450950.1| PREDICTED: CUGBP Elav-like family member 3-like isoform 1
[Oreochromis niloticus]
Length = 458
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 90/215 (41%), Positives = 133/215 (61%), Gaps = 12/215 (5%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFVGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K S+ +V LF +G+I +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSDEDVRRLFEPFGSIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++ +A AA+ +++G M G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQGHAEAQAAINSLHGSRTMPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGY 227
Q+ SQ +F + + + P YN Y
Sbjct: 185 QQVASQLG-----------IFSPMTLNF-PAYNAY 207
>gi|354503685|ref|XP_003513911.1| PREDICTED: CUGBP Elav-like family member 3 isoform 1 [Cricetulus
griseus]
Length = 491
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
>gi|148706793|gb|EDL38740.1| trinucleotide repeat containing 4, isoform CRA_f [Mus musculus]
Length = 466
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
>gi|25807801|gb|AAN73884.1| CUG-BP and ETR-3 like factor 3 [Homo sapiens]
Length = 465
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
>gi|12746392|gb|AAK07474.1|AF329264_1 CUG-BP and ETR-3 like factor 3 [Homo sapiens]
Length = 462
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
>gi|35505365|gb|AAH57553.1| Tnrc4 protein [Mus musculus]
Length = 494
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
>gi|148706790|gb|EDL38737.1| trinucleotide repeat containing 4, isoform CRA_c [Mus musculus]
Length = 567
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 78 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 137
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 138 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 197
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 198 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 257
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 258 QQVATQ 263
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 160 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 216
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 217 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 252
>gi|338725075|ref|XP_003365078.1| PREDICTED: CUGBP, Elav-like family member 3 isoform 3 [Equus
caballus]
gi|426331469|ref|XP_004026703.1| PREDICTED: CUGBP Elav-like family member 3 isoform 4 [Gorilla
gorilla gorilla]
gi|355758212|gb|EHH61449.1| hypothetical protein EGM_19912 [Macaca fascicularis]
Length = 419
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
>gi|332220299|ref|XP_003259294.1| PREDICTED: CUGBP Elav-like family member 3 [Nomascus leucogenys]
Length = 467
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
>gi|2204095|emb|CAB05391.1| FCA gamma [Arabidopsis thaliana]
Length = 747
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 120/176 (68%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ TE ++ F++ V EV +IKDK T +GCCFV + ++AD+A+
Sbjct: 120 VKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIR 179
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG + P+QV+YADGE ER LE KLF+G L K +E EV +F +G ++D
Sbjct: 180 ALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEIFLQFGHVED 239
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ ++R + S+GC F+KY +KE A+AA++ +NG + M G + PL+V++A+ ++ +
Sbjct: 240 VYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFAEPKRPK 295
>gi|71297206|gb|AAH52491.1| Trinucleotide repeat containing 4 [Homo sapiens]
Length = 464
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAKAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAKAAINTLHSSRTLPGASSSLVVKFADTEKER 179
>gi|296228815|ref|XP_002759970.1| PREDICTED: CUGBP Elav-like family member 3 isoform 1 [Callithrix
jacchus]
Length = 465
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSENRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 6/91 (6%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICPSRQEA 69
E+R KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV + EA
Sbjct: 93 EDR-KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQTHAEA 148
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELER 100
A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 149 QAAINTLHSSRTLPGASSSLVVKFADTEKER 179
>gi|186511879|ref|NP_849543.2| RNA binding / abscisic acid binding protein [Arabidopsis thaliana]
gi|332658325|gb|AEE83725.1| RNA binding / abscisic acid binding protein [Arabidopsis thaliana]
Length = 747
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 120/176 (68%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ TE ++ F++ V EV +IKDK T +GCCFV + ++AD+A+
Sbjct: 120 VKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIR 179
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG + P+QV+YADGE ER LE KLF+G L K +E EV +F +G ++D
Sbjct: 180 ALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEIFLQFGHVED 239
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ ++R + S+GC F+KY +KE A+AA++ +NG + M G + PL+V++A+ ++ +
Sbjct: 240 VYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFAEPKRPK 295
>gi|2204096|emb|CAB05392.1| FCA delta [Arabidopsis thaliana]
gi|5302786|emb|CAB46035.1| FCA delta protein [Arabidopsis thaliana]
gi|7268378|emb|CAB78671.1| FCA delta protein [Arabidopsis thaliana]
Length = 533
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 120/176 (68%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ TE ++ F++ V EV +IKDK T +GCCFV + ++AD+A+
Sbjct: 120 VKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIR 179
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG + P+QV+YADGE ER LE KLF+G L K +E EV +F +G ++D
Sbjct: 180 ALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEIFLQFGHVED 239
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ ++R + S+GC F+KY +KE A+AA++ +NG + M G + PL+V++A+ ++ +
Sbjct: 240 VYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFAEPKRPK 295
>gi|126313728|ref|XP_001366642.1| PREDICTED: CUGBP, Elav-like family member 3 isoform 1 [Monodelphis
domestica]
Length = 458
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSENRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 6/91 (6%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICPSRQEA 69
E+R KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV + EA
Sbjct: 93 EDR-KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQTHAEA 148
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELER 100
A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 149 QAAINTLHSSRTLPGASSSLVVKFADTEKER 179
>gi|186511881|ref|NP_193363.4| RNA binding / abscisic acid binding protein [Arabidopsis thaliana]
gi|332658326|gb|AEE83726.1| RNA binding / abscisic acid binding protein [Arabidopsis thaliana]
Length = 533
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 120/176 (68%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ TE ++ F++ V EV +IKDK T +GCCFV + ++AD+A+
Sbjct: 120 VKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIR 179
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG + P+QV+YADGE ER LE KLF+G L K +E EV +F +G ++D
Sbjct: 180 ALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEIFLQFGHVED 239
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ ++R + S+GC F+KY +KE A+AA++ +NG + M G + PL+V++A+ ++ +
Sbjct: 240 VYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFAEPKRPK 295
>gi|2204089|emb|CAB05388.1| FCA gamma [Arabidopsis thaliana]
gi|57169178|gb|AAW38964.1| FCA [Arabidopsis thaliana]
Length = 747
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 120/176 (68%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ TE ++ F++ V EV +IKDK T +GCCFV + ++AD+A+
Sbjct: 120 VKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIR 179
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG + P+QV+YADGE ER LE KLF+G L K +E EV +F +G ++D
Sbjct: 180 ALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEIFLQFGHVED 239
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ ++R + S+GC F+KY +KE A+AA++ +NG + M G + PL+V++A+ ++ +
Sbjct: 240 VYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFAEPKRPK 295
>gi|403302658|ref|XP_003941971.1| PREDICTED: CUGBP Elav-like family member 3 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403302660|ref|XP_003941972.1| PREDICTED: CUGBP Elav-like family member 3 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 464
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSENRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 6/91 (6%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICPSRQEA 69
E+R KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV + EA
Sbjct: 93 EDR-KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQTHAEA 148
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELER 100
A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 149 QAAINTLHSSRTLPGASSSLVVKFADTEKER 179
>gi|432853507|ref|XP_004067741.1| PREDICTED: CUGBP Elav-like family member 5-like isoform 1 [Oryzias
latipes]
Length = 529
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/229 (39%), Positives = 136/229 (59%), Gaps = 17/229 (7%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
++ +KLF+GQ+P+++ E L +F++F + E+ ++KD+ T +GC F+ +R+ A
Sbjct: 73 DQDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESAI 132
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA NA H +KTLPG + P+QVK AD E + KLF+GML K +E +V LF YG I+
Sbjct: 133 KAQNALHEQKTLPGMTRPIQVKPADSESRGEDRKLFVGMLNKQQTEEDVYRLFEPYGVIE 192
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LRG SKGCAF+K+ +A +A+ A++G M G+S LVVK+ADT+KER R
Sbjct: 193 ECTVLRGPDGNSKGCAFVKFSAHTEAQSAIGALHGSQTMPGASSSLVVKFADTDKERTIR 252
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQ 239
R Q+ Q FG A P++ Y +S ++ LMQ
Sbjct: 253 RMQQMVGQ--------------FGIFNPAIALPFSTY---SSYAHALMQ 284
>gi|334302803|sp|O04425.2|FCA_ARATH RecName: Full=Flowering time control protein FCA
gi|2244986|emb|CAB10407.1| FCA gamma protein [Arabidopsis thaliana]
gi|7268377|emb|CAB78670.1| FCA gamma protein [Arabidopsis thaliana]
Length = 747
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 120/176 (68%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ TE ++ F++ V EV +IKDK T +GCCFV + ++AD+A+
Sbjct: 120 VKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIR 179
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG + P+QV+YADGE ER LE KLF+G L K +E EV +F +G ++D
Sbjct: 180 ALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEIFLQFGHVED 239
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ ++R + S+GC F+KY +KE A+AA++ +NG + M G + PL+V++A+ ++ +
Sbjct: 240 VYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFAEPKRPK 295
>gi|2204091|emb|CAB05389.1| FCA delta [Arabidopsis thaliana]
Length = 533
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 120/176 (68%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ TE ++ F++ V EV +IKDK T +GCCFV + ++AD+A+
Sbjct: 120 VKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIR 179
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG + P+QV+YADGE ER LE KLF+G L K +E EV +F +G ++D
Sbjct: 180 ALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEIFLQFGHVED 239
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ ++R + S+GC F+KY +KE A+AA++ +NG + M G + PL+V++A+ ++ +
Sbjct: 240 VYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFAEPKRPK 295
>gi|296083224|emb|CBI22860.3| unnamed protein product [Vitis vinifera]
Length = 708
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 117/175 (66%), Gaps = 3/175 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG VP+ TE + +F+E V EV +IKDK T +GCCF+ + +EA++A+ A
Sbjct: 42 KLFVGSVPRTATEEDIRPLFEEHGNVLEVALIKDKRTGQQQGCCFIKYATSEEAERAIRA 101
Query: 76 CHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
HN+ TLPG P+QV+YADGE ERL E+KLF+G L K +E EV +FS YG ++D+
Sbjct: 102 LHNQYTLPGGVGPIQVRYADGERERLGAVEYKLFVGSLNKQATEKEVKEIFSPYGQVEDV 161
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
++R + S+GC F+K+ ++ A+AA+ A+NG + M G PL V++AD ++ R
Sbjct: 162 YLMRDELKQSRGCGFVKFSHRDMAMAAINALNGIYTMRGCDQPLTVRFADPKRPR 216
>gi|432853509|ref|XP_004067742.1| PREDICTED: CUGBP Elav-like family member 5-like isoform 2 [Oryzias
latipes]
Length = 489
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/229 (39%), Positives = 136/229 (59%), Gaps = 17/229 (7%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
++ +KLF+GQ+P+++ E L +F++F + E+ ++KD+ T +GC F+ +R+ A
Sbjct: 73 DQDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESAI 132
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA NA H +KTLPG + P+QVK AD E + KLF+GML K +E +V LF YG I+
Sbjct: 133 KAQNALHEQKTLPGMTRPIQVKPADSESRGEDRKLFVGMLNKQQTEEDVYRLFEPYGVIE 192
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LRG SKGCAF+K+ +A +A+ A++G M G+S LVVK+ADT+KER R
Sbjct: 193 ECTVLRGPDGNSKGCAFVKFSAHTEAQSAIGALHGSQTMPGASSSLVVKFADTDKERTIR 252
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQ 239
R Q+ Q FG A P++ Y +S ++ LMQ
Sbjct: 253 RMQQMVGQ--------------FGIFNPAIALPFSTY---SSYAHALMQ 284
>gi|344246977|gb|EGW03081.1| CUG-BP- and ETR-3-like factor 3 [Cricetulus griseus]
Length = 447
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
>gi|354503687|ref|XP_003513912.1| PREDICTED: CUGBP Elav-like family member 3 isoform 2 [Cricetulus
griseus]
Length = 462
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 123/186 (66%), Gaps = 1/186 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E R + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSE-SRGDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 123
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 124 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 183
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 184 QQVATQ 189
>gi|219520290|gb|AAI43227.1| TNRC4 protein [Homo sapiens]
Length = 464
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 123/186 (66%), Gaps = 1/186 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E R + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSE-SRGDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 123
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 124 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 183
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 184 QQVATQ 189
>gi|297800520|ref|XP_002868144.1| hypothetical protein ARALYDRAFT_493257 [Arabidopsis lyrata subsp.
lyrata]
gi|297313980|gb|EFH44403.1| hypothetical protein ARALYDRAFT_493257 [Arabidopsis lyrata subsp.
lyrata]
Length = 547
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 119/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E ++ F++ V EV +IKDK T +GCCFV + ++AD+A+
Sbjct: 127 VKLFVGSVPRTAIEEEVRPFFEKHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIR 186
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG + P+QV+YADGE ER LE KLF+G L K +E EV +F +G ++D
Sbjct: 187 ALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEIFLQFGRVED 246
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ ++R + S+GC F+KY +KE A+AA++ +NG + M G + PL+V++AD ++ +
Sbjct: 247 VYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFADPKRPK 302
>gi|426218925|ref|XP_004003685.1| PREDICTED: CUGBP Elav-like family member 3 [Ovis aries]
Length = 449
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
>gi|27369577|ref|NP_766022.1| CUGBP Elav-like family member 3 [Mus musculus]
gi|81914478|sp|Q8CIN6.1|CELF3_MOUSE RecName: Full=CUGBP Elav-like family member 3; Short=CELF-3;
AltName: Full=Bruno-like protein 1; AltName:
Full=CUG-BP- and ETR-3-like factor 3; AltName:
Full=ELAV-type RNA-binding protein 1; Short=ETR-1;
AltName: Full=RNA-binding protein BRUNOL-1; AltName:
Full=Trinucleotide repeat-containing gene 4 protein
gi|25807803|gb|AAN73885.1| CUG-BP and ETR-3 like factor 3 [Mus musculus]
Length = 465
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 123/186 (66%), Gaps = 1/186 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E R + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSE-SRGDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 123
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 124 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 183
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 184 QQVATQ 189
>gi|332658328|gb|AEE83728.1| RNA binding / abscisic acid binding protein [Arabidopsis thaliana]
Length = 672
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 120/176 (68%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ TE ++ F++ V EV +IKDK T +GCCFV + ++AD+A+
Sbjct: 45 VKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIR 104
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG + P+QV+YADGE ER LE KLF+G L K +E EV +F +G ++D
Sbjct: 105 ALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEIFLQFGHVED 164
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ ++R + S+GC F+KY +KE A+AA++ +NG + M G + PL+V++A+ ++ +
Sbjct: 165 VYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFAEPKRPK 220
>gi|395535951|ref|XP_003769984.1| PREDICTED: CUGBP Elav-like family member 3 isoform 1 [Sarcophilus
harrisii]
Length = 458
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSENRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 6/91 (6%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICPSRQEA 69
E+R KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV + EA
Sbjct: 93 EDR-KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQTHAEA 148
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELER 100
A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 149 QAAINTLHSSRTLPGASSSLVVKFADTEKER 179
>gi|33390912|gb|AAQ17123.1| flowering time control protein isoform OsFCA-1 [Oryza sativa Indica
Group]
gi|47496990|dbj|BAD20100.1| Flowering time control protein FCA gamma-like [Oryza sativa
Japonica Group]
gi|50261763|gb|AAT72462.1| FCA gamma protein [Oryza sativa Japonica Group]
gi|58003966|gb|AAW62371.1| FCA [Oryza sativa Japonica Group]
Length = 738
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 76/176 (43%), Positives = 119/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLF+G VP+ TE + +F+E V EV +IKD+ T +GCCFV + +EA++A+
Sbjct: 122 VKLFIGSVPRTATEDDVRPLFEEHGDVVEVALIKDRKTGEQQGCCFVKYATSEEAERAIR 181
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ YG ++D
Sbjct: 182 ALHNQYTLPGAMGPIQVRYADGERERHGAIEHKLFVASLNKQATAKEIEEIFAPYGHVED 241
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ ++E ALAA+ A++G + M G PL++++AD ++ R
Sbjct: 242 VYIMKDGMRQSRGCGFVKFSSREPALAAMSALSGNYVMRGCEQPLIIRFADPKRPR 297
>gi|444515071|gb|ELV10733.1| CUGBP Elav-like family member 3 [Tupaia chinensis]
Length = 431
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
>gi|147905119|ref|NP_001080695.1| CUGBP Elav-like family member 3-B [Xenopus laevis]
gi|82241483|sp|Q7ZWM3.1|CEL3B_XENLA RecName: Full=CUGBP Elav-like family member 3-B; Short=CELF3-B;
AltName: Full=Bruno-like protein 1-B; AltName:
Full=CUG-BP- and ETR-3-like factor 3-B; AltName:
Full=ELAV-type RNA-binding protein 1-B; Short=ETR-1-B;
AltName: Full=RNA-binding protein BRUNOL-1-B; AltName:
Full=Trinucleotide repeat-containing gene 4 protein B
gi|28422663|gb|AAH46942.1| Tnrc4-prov protein [Xenopus laevis]
Length = 462
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/186 (44%), Positives = 124/186 (66%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLF+GQ+P+++ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +G I +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRRMFETFGNIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ A++G + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHTEAQAAINALHGSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVANQ 190
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRRMFETFGNIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+NA H +TLPGASS L VK+AD E ER
Sbjct: 144 THTEAQAAINALHGSRTLPGASSSLVVKFADTEKER 179
>gi|148706791|gb|EDL38738.1| trinucleotide repeat containing 4, isoform CRA_d [Mus musculus]
Length = 538
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 123/186 (66%), Gaps = 1/186 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 78 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 137
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E R + KLF+GML K ++ +V +F +GTI +
Sbjct: 138 QSALHEQKTLPGMNRPIQVKPADSE-SRGDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 196
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 197 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 256
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 257 QQVATQ 262
>gi|218201679|gb|EEC84106.1| hypothetical protein OsI_30426 [Oryza sativa Indica Group]
Length = 758
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 76/176 (43%), Positives = 119/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLF+G VP+ TE + +F+E V EV +IKD+ T +GCCFV + +EA++A+
Sbjct: 122 VKLFIGSVPRTATEDDVRPLFEEHGDVVEVALIKDRKTGEQQGCCFVKYATSEEAERAIR 181
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ YG ++D
Sbjct: 182 ALHNQYTLPGAMGPIQVRYADGERERHGAIEHKLFVASLNKQATAKEIEEIFAPYGHVED 241
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ ++E ALAA+ A++G + M G PL++++AD ++ R
Sbjct: 242 VYIMKDGMRQSRGCGFVKFSSREPALAAMSALSGNYVMRGCEQPLIIRFADPKRPR 297
>gi|293333224|ref|NP_001169298.1| uncharacterized protein LOC100383162 [Zea mays]
gi|224028499|gb|ACN33325.1| unknown [Zea mays]
gi|414588978|tpg|DAA39549.1| TPA: hypothetical protein ZEAMMB73_959869 [Zea mays]
Length = 735
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 120/185 (64%), Gaps = 3/185 (1%)
Query: 6 KEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPS 65
++ S VKLFVG VP+ TE + +F+E V EV +IKD+ T +GCCFV +
Sbjct: 113 QDHDSRSNYVKLFVGSVPRTATEEDVRPLFEEHGDVLEVALIKDRKTGEQQGCCFVKYAT 172
Query: 66 RQEADKAVNACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSAL 122
+EA++A+ HN TLPGA P+QV+YADGE ER +EHKLF+ L K + E+ +
Sbjct: 173 SEEAERAIRGLHNHYTLPGAMGPIQVRYADGERERHGAIEHKLFVASLNKQATPKEIEEI 232
Query: 123 FSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
F+ YG ++D+ I+R S + S+GC F+K+ +KE A+ A+ A++G + M G PL++++AD
Sbjct: 233 FAPYGHVEDVYIMRDSVKQSRGCGFVKFSSKEAAVEAMNALSGTYTMRGCEQPLIIRFAD 292
Query: 183 TEKER 187
++ R
Sbjct: 293 PKRPR 297
>gi|443723647|gb|ELU11974.1| hypothetical protein CAPTEDRAFT_144233 [Capitella teleta]
Length = 461
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/224 (41%), Positives = 138/224 (61%), Gaps = 10/224 (4%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ M E+ L MF+EF V ++N+++DK T S+GCCFV +R+ A +A
Sbjct: 14 DAIKMFVGQIPRSMDESDLRKMFEEFGPVFQLNVLRDKVTGQSKGCCFVTFYTRKSALEA 73
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
N HN KT+ G P+Q+K AD E E KLF+GML K +E EV +F+ +GTI++
Sbjct: 74 QNQLHNIKTMAGMQHPIQMKPADCEKRNEERKLFVGMLSKKCNENEVRMMFAPFGTIEEC 133
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR S+GCAF+ Y +K+ A A++ ++ MEG PLVV++ADT+KE++ ++
Sbjct: 134 TVLREQNGQSRGCAFVTYASKQCAQNAIKGMHHSQTMEGCRFPLVVRFADTQKEKEMKKL 193
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYG 236
Q+ Q+ NL N + L G +G P Y QAS S G
Sbjct: 194 QQMQA---NLLNTN-----LTGLAGLG--PQYLNLLQQASSSPG 227
>gi|414588979|tpg|DAA39550.1| TPA: hypothetical protein ZEAMMB73_959869 [Zea mays]
Length = 708
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 120/185 (64%), Gaps = 3/185 (1%)
Query: 6 KEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPS 65
++ S VKLFVG VP+ TE + +F+E V EV +IKD+ T +GCCFV +
Sbjct: 113 QDHDSRSNYVKLFVGSVPRTATEEDVRPLFEEHGDVLEVALIKDRKTGEQQGCCFVKYAT 172
Query: 66 RQEADKAVNACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSAL 122
+EA++A+ HN TLPGA P+QV+YADGE ER +EHKLF+ L K + E+ +
Sbjct: 173 SEEAERAIRGLHNHYTLPGAMGPIQVRYADGERERHGAIEHKLFVASLNKQATPKEIEEI 232
Query: 123 FSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
F+ YG ++D+ I+R S + S+GC F+K+ +KE A+ A+ A++G + M G PL++++AD
Sbjct: 233 FAPYGHVEDVYIMRDSVKQSRGCGFVKFSSKEAAVEAMNALSGTYTMRGCEQPLIIRFAD 292
Query: 183 TEKER 187
++ R
Sbjct: 293 PKRPR 297
>gi|34555650|gb|AAQ74973.1| flowering time control protein isoform OsFCA-4 [Oryza sativa Indica
Group]
Length = 626
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 76/176 (43%), Positives = 119/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLF+G VP+ TE + +F+E V EV +IKD+ T +GCCFV + +EA++A+
Sbjct: 21 VKLFIGSVPRTATEDDVRPLFEEHGDVVEVALIKDRKTGEQQGCCFVKYATSEEAERAIR 80
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ YG ++D
Sbjct: 81 ALHNQYTLPGAMGPIQVRYADGERERHGAIEHKLFVASLNKQATAKEIEEIFAPYGHVED 140
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ ++E ALAA+ A++G + M G PL++++AD ++ R
Sbjct: 141 VYIMKDGMRQSRGCGFVKFSSREPALAAMSALSGNYVMRGCEQPLIIRFADPKRPR 196
>gi|410921164|ref|XP_003974053.1| PREDICTED: CUGBP Elav-like family member 5-like isoform 2 [Takifugu
rubripes]
Length = 500
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 137/230 (59%), Gaps = 18/230 (7%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
++ +KLF+GQ+P+++ E L +F++F + E+ ++KD+ T +GC F+ +R+ A
Sbjct: 74 DQDAIKLFIGQIPRNLEEKDLKPLFEQFGKIHELTVLKDRYTGMHKGCAFLTYCARESAI 133
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTI 129
KA NA H +KTLPG + P+QVK AD E + KLF+GML K +E +V LF YG I
Sbjct: 134 KAQNALHEQKTLPGMTRPIQVKPADSESRGGKDRKLFVGMLNKQQTEEDVYRLFEPYGVI 193
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ +LRG SKGCAF+K+ T +A +A+ A++G M G+S LVVK+ADT+KER
Sbjct: 194 EECTVLRGPDGNSKGCAFVKFSTHTEAQSAISALHGSQTMPGASSSLVVKFADTDKERTI 253
Query: 190 RRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQ 239
RR Q+ Q FG A P++ Y +S ++ LMQ
Sbjct: 254 RRMQQMVGQ--------------FGIFNPAIALPFSTY---SSYAHALMQ 286
>gi|115478012|ref|NP_001062601.1| Os09g0123200 [Oryza sativa Japonica Group]
gi|34555646|gb|AAQ74971.1| flowering time control protein isoform OsFCA-3 [Oryza sativa Indica
Group]
gi|113630834|dbj|BAF24515.1| Os09g0123200 [Oryza sativa Japonica Group]
Length = 637
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 76/176 (43%), Positives = 119/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLF+G VP+ TE + +F+E V EV +IKD+ T +GCCFV + +EA++A+
Sbjct: 21 VKLFIGSVPRTATEDDVRPLFEEHGDVVEVALIKDRKTGEQQGCCFVKYATSEEAERAIR 80
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ YG ++D
Sbjct: 81 ALHNQYTLPGAMGPIQVRYADGERERHGAIEHKLFVASLNKQATAKEIEEIFAPYGHVED 140
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ ++E ALAA+ A++G + M G PL++++AD ++ R
Sbjct: 141 VYIMKDGMRQSRGCGFVKFSSREPALAAMSALSGNYVMRGCEQPLIIRFADPKRPR 196
>gi|348526888|ref|XP_003450951.1| PREDICTED: CUGBP Elav-like family member 3-like isoform 2
[Oreochromis niloticus]
Length = 405
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 90/215 (41%), Positives = 133/215 (61%), Gaps = 12/215 (5%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFVGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K S+ +V LF +G+I +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSDEDVRRLFEPFGSIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++ +A AA+ +++G M G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQGHAEAQAAINSLHGSRTMPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGY 227
Q+ SQ +F + + + P YN Y
Sbjct: 185 QQVASQLG-----------IFSPMTLNF-PAYNAY 207
>gi|158253638|gb|AAI54064.1| tnrc4 protein [Xenopus (Silurana) tropicalis]
Length = 462
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 82/186 (44%), Positives = 124/186 (66%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLF+GQ+P+++ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +G I +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRRMFEPFGNIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ A++G + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHTEAQAAINALHGSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVANQ 190
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRRMFEPFGNIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+NA H +TLPGASS L VK+AD E ER
Sbjct: 144 THTEAQAAINALHGSRTLPGASSSLVVKFADTEKER 179
>gi|606976|gb|AAA81375.1| ribonucleoprotein [Xenopus laevis]
Length = 462
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 82/186 (44%), Positives = 124/186 (66%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLF+GQ+P+++ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +G I +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRRMFEPFGNIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ A++G + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHTEAQAAINALHGSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVANQ 190
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRRMFEPFGNIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+NA H +TLPGASS L VK+AD E ER
Sbjct: 144 THTEAQAAINALHGSRTLPGASSSLVVKFADTEKER 179
>gi|147907254|ref|NP_001079936.1| CUGBP Elav-like family member 3-A [Xenopus laevis]
gi|152013388|sp|Q91579.2|CEL3A_XENLA RecName: Full=CUGBP Elav-like family member 3-A; Short=CELF-3A;
AltName: Full=Bruno-like protein 1-A; AltName:
Full=CUG-BP- and ETR-3-like factor 3-A; AltName:
Full=ELAV-type RNA-binding protein 1-A; Short=ETR-1-A;
AltName: Full=RNA-binding protein BRUNOL-1-A; AltName:
Full=Trinucleotide repeat-containing gene 4 protein A
gi|34785486|gb|AAH57704.1| Etr-1 protein [Xenopus laevis]
gi|47937574|gb|AAH72134.1| Etr-1 protein [Xenopus laevis]
Length = 462
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 82/186 (44%), Positives = 124/186 (66%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLF+GQ+P+++ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +G I +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRRMFEPFGNIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ A++G + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHTEAQAAINALHGSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVANQ 190
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRRMFEPFGNIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+NA H +TLPGASS L VK+AD E ER
Sbjct: 144 THTEAQAAINALHGSRTLPGASSSLVVKFADTEKER 179
>gi|391337388|ref|XP_003743051.1| PREDICTED: CUGBP Elav-like family member 2-like [Metaseiulus
occidentalis]
Length = 512
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 82/169 (48%), Positives = 115/169 (68%), Gaps = 1/169 (0%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+K+FVGQ+P++ E +L +F+EF V +N+++DK T SRGCCFV +R+ A A N
Sbjct: 58 IKMFVGQIPRNWDENELRNLFEEFGKVHSINVLRDKATGNSRGCCFVTFYTRKSALDAQN 117
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
HN KTLPG P+Q+K AD E R E KLFIGML K E++V +FS +GTI++ +
Sbjct: 118 DLHNIKTLPGMHHPIQMKPADSE-NRNERKLFIGMLSKECDESDVRLMFSSFGTIEECTV 176
Query: 135 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADT 183
LR Q SKGCAF+ Y T++ A+ A++++N M+G S PLVVK+ADT
Sbjct: 177 LRDGQGQSKGCAFVTYSTRQCAINAIKSMNHSQTMKGCSNPLVVKFADT 225
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLF+G + K E+ + MF F ++E +++D + S+GC FV +R
Sbjct: 138 DSENRNER-KLFIGMLSKECDESDVRLMFSSFGTIEECTVLRDGQGQ-SKGCAFVTYSTR 195
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYAD 95
Q A A+ + ++ +T+ G S+PL VK+AD
Sbjct: 196 QCAINAIKSMNHSQTMKGCSNPLVVKFAD 224
>gi|344275414|ref|XP_003409507.1| PREDICTED: CUGBP Elav-like family member 3 [Loxodonta africana]
Length = 420
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
>gi|359321741|ref|XP_003639690.1| PREDICTED: CUGBP Elav-like family member 3-like isoform 2 [Canis
lupus familiaris]
Length = 412
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
>gi|350583383|ref|XP_003481500.1| PREDICTED: CUGBP, Elav-like family member 3 isoform 2 [Sus scrofa]
gi|397492760|ref|XP_003817288.1| PREDICTED: CUGBP Elav-like family member 3 isoform 2 [Pan paniscus]
gi|426331465|ref|XP_004026701.1| PREDICTED: CUGBP Elav-like family member 3 isoform 2 [Gorilla
gorilla gorilla]
Length = 414
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
>gi|348586640|ref|XP_003479076.1| PREDICTED: CUGBP Elav-like family member 3-like isoform 2 [Cavia
porcellus]
gi|410968368|ref|XP_003990679.1| PREDICTED: CUGBP Elav-like family member 3 isoform 2 [Felis catus]
Length = 413
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
>gi|410033642|ref|XP_524868.3| PREDICTED: CUGBP, Elav-like family member 3 isoform 3 [Pan
troglodytes]
Length = 414
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
>gi|289547605|ref|NP_001166120.1| CUGBP Elav-like family member 3 isoform 3 [Homo sapiens]
gi|338725073|ref|XP_003365077.1| PREDICTED: CUGBP, Elav-like family member 3 isoform 2 [Equus
caballus]
gi|119573807|gb|EAW53422.1| trinucleotide repeat containing 4, isoform CRA_d [Homo sapiens]
Length = 415
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
>gi|334324674|ref|XP_003340553.1| PREDICTED: CUGBP, Elav-like family member 3 [Monodelphis domestica]
Length = 408
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSENRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 6/91 (6%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICPSRQEA 69
E+R KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV + EA
Sbjct: 93 EDR-KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQTHAEA 148
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELER 100
A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 149 QAAINTLHSSRTLPGASSSLVVKFADTEKER 179
>gi|298710156|emb|CBJ31866.1| trinucleotide repeat containing 4, isoform CRA_d [Ectocarpus
siliculosus]
Length = 494
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 124/177 (70%), Gaps = 1/177 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+PKHM E L +F+EF + ++ +I+DK + RGC F+ +R AD A
Sbjct: 42 DAIKLFVGQIPKHMEEEDLRPVFEEFGEIFDLAVIRDKISGLHRGCAFLTYCARVSADAA 101
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+ A H ++ L +PLQV+ A+G+ E+ E+KLF+GM PK+ +E E+ A+F+ YGT++++
Sbjct: 102 IAALHGQRRLDRGQNPLQVRPAEGQAEQ-ENKLFVGMAPKSANEDEIRAVFAPYGTLREI 160
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++R T+KGCAF+KY T++ AL A+EA++ ++ M+G PLVVK+AD ++ QA
Sbjct: 161 HVIRNQDGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKRGTQA 217
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+E+ KLFVG PK E ++ A+F + + E+++I+++ ++GC FV +RQ A
Sbjct: 127 AEQENKLFVGMAPKSANEDEIRAVFAPYGTLREIHVIRNQDG-TNKGCAFVKYTTRQSAL 185
Query: 71 KAVNACHNKKTLPGASSPLQVKYAD 95
A+ A H + T+ G PL VK+AD
Sbjct: 186 DAIEALHEQYTMQGGPRPLVVKFAD 210
>gi|395535953|ref|XP_003769985.1| PREDICTED: CUGBP Elav-like family member 3 isoform 2 [Sarcophilus
harrisii]
Length = 408
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSENRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 6/91 (6%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICPSRQEA 69
E+R KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV + EA
Sbjct: 93 EDR-KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQTHAEA 148
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELER 100
A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 149 QAAINTLHSSRTLPGASSSLVVKFADTEKER 179
>gi|168017537|ref|XP_001761304.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687644|gb|EDQ74026.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 84/159 (52%), Positives = 110/159 (69%), Gaps = 3/159 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ +TE ++ MF E V EV IIKDK T +GCCFV + +EAD+A+
Sbjct: 2 VKLFVGSVPRTITEDEVRPMFAEHGNVIEVAIIKDKRTGNQQGCCFVKYSTVEEADRAIR 61
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+KTLPG +P+QV+YADGE ERL EHKLF+G L K SE E+ LF YG + D
Sbjct: 62 ALHNQKTLPGGVAPVQVRYADGERERLGAVEHKLFVGSLNKQASEKEIEELFLPYGRVDD 121
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKME 170
+ I+R Q+ S+GCAF+KY ++ A AA+ A+NG H M+
Sbjct: 122 VYIMRDEQKQSRGCAFIKYSQRDHAQAAINALNGVHIMQ 160
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEA 162
KLF+G +P+ ++E EV +F+ +G + ++ I++ + +GC F+KY T E+A A+ A
Sbjct: 3 KLFVGSVPRTITEDEVRPMFAEHGNVIEVAIIKDKRTGNQQGCCFVKYSTVEEADRAIRA 62
Query: 163 INGKHKMEGSSVPLVVKWADTEKER 187
++ + + G P+ V++AD E+ER
Sbjct: 63 LHNQKTLPGGVAPVQVRYADGERER 87
>gi|18150431|gb|AAL61622.1|AF414188_1 FCA gamma [Brassica napus]
Length = 715
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ TE ++ F++ V EV IKDK T +GCCFV + ++AD+A+
Sbjct: 102 VKLFVGSVPRTATEEEVRPFFEQHGNVLEVAFIKDKRTGQQQGCCFVKYATSEDADRAIR 161
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG + +QV+YADGE ER+ E KLF+G L K +E EV LF +G ++D
Sbjct: 162 ALHNQITLPGGTGLVQVRYADGERERIGAVEFKLFVGSLNKQATENEVEELFLQFGRVED 221
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ ++R + S+GC F+KY +KE A+AA++ +NG + M G + PL+V++AD ++ +
Sbjct: 222 VYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFADPKRPK 277
>gi|334314036|ref|XP_003339980.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Monodelphis
domestica]
Length = 464
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 122/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 49 DHDAIKLFVGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGVHKGCAFLTYCARDSAL 108
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 109 KAQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEEDVRRLFEPFGQIE 168
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG TSKGCAF+K+ ++ +A AA+ +++G M G+S LVVK+ADT+KER R
Sbjct: 169 ECTILRGPDGTSKGCAFVKFGSQAEAQAAINSLHGSQNMPGASSSLVVKFADTDKERTLR 228
Query: 191 RAQKAQSQ 198
R + Q
Sbjct: 229 RMHQMAGQ 236
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Query: 83 PGASSPLQVKYADGELERLEH-------KLFIGMLPKNVSEAEVSALFSIYGTIKDLQIL 135
P + PLQ YA ++H LFI LP+ +AE+ +F +GT+ ++
Sbjct: 357 PSVADPLQQAYAG-----MQHYAGPEGCNLFIYHLPQEFGDAELMQMFLPFGTVISAKVF 411
Query: 136 --RGSQQTSKGCAFLKYETKEQALAALEAING 165
R + Q SK F+ ++ A A++A+NG
Sbjct: 412 VDRATNQ-SKCFGFVSFDNPASAQTAIQAMNG 442
>gi|126272943|ref|XP_001371226.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Monodelphis
domestica]
Length = 491
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 122/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 49 DHDAIKLFVGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGVHKGCAFLTYCARDSAL 108
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 109 KAQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEEDVRRLFEPFGQIE 168
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG TSKGCAF+K+ ++ +A AA+ +++G M G+S LVVK+ADT+KER R
Sbjct: 169 ECTILRGPDGTSKGCAFVKFGSQAEAQAAINSLHGSQNMPGASSSLVVKFADTDKERTLR 228
Query: 191 RAQKAQSQ 198
R + Q
Sbjct: 229 RMHQMAGQ 236
>gi|34555648|gb|AAQ74972.1| flowering time control protein isoform OsFCA-2 [Oryza sativa Indica
Group]
Length = 649
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 76/176 (43%), Positives = 119/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLF+G VP+ TE + +F+E V EV +IKD+ T +GCCFV + +EA++A+
Sbjct: 122 VKLFIGSVPRTATEDDVRPLFEEHGDVVEVALIKDRKTGEQQGCCFVKYATSEEAERAIR 181
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ YG ++D
Sbjct: 182 ALHNQYTLPGAMGPIQVRYADGERERHGAIEHKLFVASLNKQATAKEIEEIFAPYGHVED 241
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ ++E ALAA+ A++G + M G PL++++AD ++ R
Sbjct: 242 VYIMKDGMRQSRGCGFVKFSSREPALAAMSALSGNYVMRGCEQPLIIRFADPKRPR 297
>gi|11045077|emb|CAB41488.2| putative FCA orthologue [Brassica napus]
Length = 384
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ TE ++ F++ V EV IKDK T +GCCFV + ++AD+A+
Sbjct: 105 VKLFVGSVPRTATEEEVRPFFEQHGNVLEVAFIKDKRTGQQQGCCFVKYATSEDADRAIR 164
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPG + +QV+YADGE ER+ E KLF+G L K +E EV LF +G ++D
Sbjct: 165 ALHNQITLPGGTGLVQVRYADGERERIGAVEFKLFVGSLNKQATENEVEELFLQFGRVED 224
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ ++R + S+GC F+KY +KE A+AA++ +NG + M G + PL+V++AD ++ +
Sbjct: 225 VYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFADPKRPK 280
>gi|149030745|gb|EDL85782.1| similar to trinucleotide repeat containing 4 (predicted), isoform
CRA_b [Rattus norvegicus]
Length = 284
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 122/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ +Q
Sbjct: 185 QQVATQ 190
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 179
>gi|334314038|ref|XP_003339981.1| PREDICTED: CUGBP Elav-like family member 6 isoform 3 [Monodelphis
domestica]
Length = 470
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 122/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 49 DHDAIKLFVGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGVHKGCAFLTYCARDSAL 108
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 109 KAQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEEDVRRLFEPFGQIE 168
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG TSKGCAF+K+ ++ +A AA+ +++G M G+S LVVK+ADT+KER R
Sbjct: 169 ECTILRGPDGTSKGCAFVKFGSQAEAQAAINSLHGSQNMPGASSSLVVKFADTDKERTLR 228
Query: 191 RAQKAQSQ 198
R + Q
Sbjct: 229 RMHQMAGQ 236
>gi|363742943|ref|XP_003642748.1| PREDICTED: CUGBP Elav-like family member 3 isoform 2 [Gallus
gallus]
Length = 464
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/224 (41%), Positives = 136/224 (60%), Gaps = 12/224 (5%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLSKQQADEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K+++ +A AA+ A++G + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQSHAEAQAAIAALHGSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYG 236
Q+ SQ Q FGA Y+ Y G++G
Sbjct: 185 QQVASQLGMFSPIALQ----FGA--------YSAYTQAVGGTWG 216
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K + + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLSKQQADEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S EA A+ A H +TLPGASS L VK+AD E ER
Sbjct: 144 SHAEAQAAIAALHGSRTLPGASSSLVVKFADTEKER 179
>gi|145306688|gb|ABP57108.1| CUG-BP and ETR-3-like factor 6 [Gallus gallus]
Length = 445
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 121/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E+ L +F+EF + E+ ++KD+ T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRNLEESDLKPLFEEFGRIYELTVLKDRFTGMHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I++
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFEPFGQIEEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
ILRG SKGCAF+KY + +A AA+ +++G M G+S LVVK+ADT+KER RR
Sbjct: 125 TILRGPDGASKGCAFVKYSSHAEAQAAISSLHGSQTMPGASSSLVVKFADTDKERTLRRM 184
Query: 193 QKAQSQ 198
+ Q
Sbjct: 185 HQMAGQ 190
>gi|363737471|ref|XP_425051.3| PREDICTED: CUGBP Elav-like family member 3 [Gallus gallus]
Length = 445
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+++ E+ L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 3 DHDAIKLFVGQIPRNLEESDLKPLFEEFGRIYELTVLKDRFTGMHKGCAFLTYCARDSAL 62
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 63 KAQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFEPFGQIE 122
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ +++G M G+S LVVK+ADT+KER R
Sbjct: 123 ECTILRGPDGASKGCAFVKYSSHAEAQAAISSLHGSQTMPGASSSLVVKFADTDKERTLR 182
Query: 191 RAQKAQSQ 198
R + Q
Sbjct: 183 RMHQMAGQ 190
>gi|291327533|ref|NP_001167545.1| CUGBP Elav-like family member 4 isoform F [Mus musculus]
gi|26341974|dbj|BAC34649.1| unnamed protein product [Mus musculus]
Length = 456
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 121/198 (61%), Gaps = 10/198 (5%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVS 120
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVR 169
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+
Sbjct: 170 RLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 229
Query: 181 ADTEKERQARRAQKAQSQ 198
ADT+KER RR Q+ Q
Sbjct: 230 ADTDKERTMRRMQQMAGQ 247
>gi|363742939|ref|XP_003642747.1| PREDICTED: CUGBP Elav-like family member 3 isoform 1 [Gallus
gallus]
Length = 451
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 85/186 (45%), Positives = 125/186 (67%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLSKQQADEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K+++ +A AA+ A++G + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQSHAEAQAAIAALHGSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ SQ
Sbjct: 185 QQVASQ 190
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K + + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLSKQQADEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S EA A+ A H +TLPGASS L VK+AD E ER
Sbjct: 144 SHAEAQAAIAALHGSRTLPGASSSLVVKFADTEKER 179
>gi|148664595|gb|EDK97011.1| bruno-like 4, RNA binding protein (Drosophila), isoform CRA_b [Mus
musculus]
Length = 463
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 121/198 (61%), Gaps = 10/198 (5%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 56 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVS 120
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V
Sbjct: 116 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVR 175
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+
Sbjct: 176 RLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 235
Query: 181 ADTEKERQARRAQKAQSQ 198
ADT+KER RR Q+ Q
Sbjct: 236 ADTDKERTMRRMQQMAGQ 253
>gi|226371661|ref|NP_001139765.1| CUGBP Elav-like family member 4 isoform B [Mus musculus]
gi|30931371|gb|AAH52744.1| Bruno-like 4, RNA binding protein (Drosophila) [Mus musculus]
Length = 485
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 121/198 (61%), Gaps = 10/198 (5%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVS 120
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVR 169
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+
Sbjct: 170 RLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 229
Query: 181 ADTEKERQARRAQKAQSQ 198
ADT+KER RR Q+ Q
Sbjct: 230 ADTDKERTMRRMQQMAGQ 247
>gi|387542962|gb|AFJ72108.1| CUGBP Elav-like family member 4 isoform 1 [Macaca mulatta]
Length = 486
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 120/198 (60%), Gaps = 10/198 (5%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARDSAI 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVS 120
KA A H +KTLPG + P+QVK AD E + KLF+GML K SE +V
Sbjct: 110 KAQTALHEQKTLPGMARPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVR 169
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+
Sbjct: 170 RLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 229
Query: 181 ADTEKERQARRAQKAQSQ 198
ADT+KER RR Q+ Q
Sbjct: 230 ADTDKERTMRRMQQMAGQ 247
>gi|301776386|ref|XP_002923617.1| PREDICTED: CUGBP Elav-like family member 5-like [Ailuropoda
melanoleuca]
Length = 418
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 91/215 (42%), Positives = 129/215 (60%), Gaps = 11/215 (5%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E+ ++KD T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I +
Sbjct: 65 QTALHEQKTLPGMARPIQVKPADSESRGGDRKLFVGMLNKQQSEEDVLRLFQPFGVIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG +SKGCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 125 TVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 184
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGY 227
Q+ Q L PSL LP PY+ Y
Sbjct: 185 QQMVGQLGIL------TPSL--TLPFS---PYSAY 208
>gi|326674562|ref|XP_002664812.2| PREDICTED: CUGBP Elav-like family member 3-like [Danio rerio]
Length = 442
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 124/186 (66%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLF+GQ+P+++ E L +F+++ + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFIGQIPRNLEEKDLKPIFEQYGKIYELTVIKDKYTGMHKGCAFLTYCARESAIKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K S+ +V +F +G I +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSDEDVRKIFEPFGGIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K+++ +A +A+ +++G + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQSHSEAQSAINSLHGSRTLPGASSSLVVKFADTEKERGVRRM 184
Query: 193 QKAQSQ 198
Q+ SQ
Sbjct: 185 QQVTSQ 190
>gi|24762232|ref|NP_068757.2| CUGBP Elav-like family member 5 isoform 1 [Homo sapiens]
gi|402903694|ref|XP_003914695.1| PREDICTED: CUGBP Elav-like family member 5 [Papio anubis]
gi|74762534|sp|Q8N6W0.1|CELF5_HUMAN RecName: Full=CUGBP Elav-like family member 5; Short=CELF-5;
AltName: Full=Bruno-like protein 5; AltName:
Full=CUG-BP- and ETR-3-like factor 5; AltName:
Full=RNA-binding protein BRUNOL-5
gi|20380221|gb|AAH28101.1| Bruno-like 5, RNA binding protein (Drosophila) [Homo sapiens]
gi|119589733|gb|EAW69327.1| bruno-like 5, RNA binding protein (Drosophila), isoform CRA_a [Homo
sapiens]
gi|119589734|gb|EAW69328.1| bruno-like 5, RNA binding protein (Drosophila), isoform CRA_a [Homo
sapiens]
gi|123981490|gb|ABM82574.1| bruno-like 5, RNA binding protein (Drosophila) [synthetic
construct]
gi|123996323|gb|ABM85763.1| bruno-like 5, RNA binding protein (Drosophila) [synthetic
construct]
Length = 485
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 92/216 (42%), Positives = 129/216 (59%), Gaps = 12/216 (5%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ ++KD T +GC F+ +R A KA
Sbjct: 43 DAIKLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKA 102
Query: 73 VNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I +
Sbjct: 103 QTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDE 162
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG +SKGCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 163 CTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRR 222
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGY 227
Q+ Q L PSL LP PY+ Y
Sbjct: 223 MQQMVGQLGIL------TPSL--TLPFS---PYSAY 247
>gi|12746396|gb|AAK07476.1|AF329266_1 CUG-BP and ETR-3 like factor 5 [Homo sapiens]
Length = 481
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 92/216 (42%), Positives = 129/216 (59%), Gaps = 12/216 (5%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ ++KD T +GC F+ +R A KA
Sbjct: 43 DAIKLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKA 102
Query: 73 VNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I +
Sbjct: 103 QTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDE 162
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG +SKGCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 163 CTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRR 222
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGY 227
Q+ Q L PSL LP PY+ Y
Sbjct: 223 MQQMVGQLGIL------TPSL--TLPFS---PYSAY 247
>gi|189339278|ref|NP_795928.2| CUG-BP- and ETR-3-like factor 5 [Mus musculus]
Length = 395
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 116/310 (37%), Positives = 157/310 (50%), Gaps = 45/310 (14%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ ++KD T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLHEQDLKPLFEQFGRIYELTVLKDPHTGVHKGCAFLTYCARDSAIKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I +
Sbjct: 65 QTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDE 124
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG +SKGCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 125 CTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRR 184
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG----------YQASGSYGLMQYR 241
Q+ Q L PSL LP PY+ Y SGSY
Sbjct: 185 MQQMVGQLGIL------TPSL--TLPFS---PYSAYAQALMQQQTTVLSTSGSYLSPGVA 233
Query: 242 LPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGS---GYPAVPGL 298
PP + Q A +S N P P SG G AVPGL
Sbjct: 234 FPPCH-----------IQQIGA-------VSLNGLPATPIAPASGLHSPPLLGTAAVPGL 275
Query: 299 QYPMP--YPG 306
P+P +PG
Sbjct: 276 MAPIPNGFPG 285
>gi|291394300|ref|XP_002713553.1| PREDICTED: bruno-like 4, RNA binding protein-like [Oryctolagus
cuniculus]
Length = 485
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 121/198 (61%), Gaps = 10/198 (5%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVS 120
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCPRQPPSQDRKLFVGMLNKQQSEDDVR 169
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+
Sbjct: 170 RLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 229
Query: 181 ADTEKERQARRAQKAQSQ 198
ADT+KER RR Q+ Q
Sbjct: 230 ADTDKERTMRRMQQMAGQ 247
>gi|395822986|ref|XP_003784782.1| PREDICTED: CUGBP Elav-like family member 4 isoform 1 [Otolemur
garnettii]
Length = 486
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 121/198 (61%), Gaps = 10/198 (5%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVS 120
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVR 169
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+
Sbjct: 170 RLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 229
Query: 181 ADTEKERQARRAQKAQSQ 198
ADT+KER RR Q+ Q
Sbjct: 230 ADTDKERTMRRMQQMAGQ 247
>gi|148664597|gb|EDK97013.1| bruno-like 4, RNA binding protein (Drosophila), isoform CRA_d [Mus
musculus]
Length = 491
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 121/198 (61%), Gaps = 10/198 (5%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 56 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVS 120
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V
Sbjct: 116 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVR 175
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+
Sbjct: 176 RLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 235
Query: 181 ADTEKERQARRAQKAQSQ 198
ADT+KER RR Q+ Q
Sbjct: 236 ADTDKERTMRRMQQMAGQ 253
>gi|283838931|gb|ADB44797.1| FCA [Vitis vinifera]
Length = 281
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 77/175 (44%), Positives = 117/175 (66%), Gaps = 3/175 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG VP+ TE + +F+E V EV +IKDK T +GCCF+ + +EA++A+ A
Sbjct: 103 KLFVGSVPRTATEEDIRPLFEEHGNVLEVALIKDKRTGQQQGCCFIKYATSEEAERAIRA 162
Query: 76 CHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
HN+ TLPG P++V+YADGE ERL E+KLF+G L K +E EV +FS YG ++D+
Sbjct: 163 LHNQYTLPGGVGPIEVRYADGERERLGAVEYKLFVGSLNKQATEKEVKEIFSPYGQVEDV 222
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
++R + S+GC F+ + ++ A+AA+ A+NG + M+G PL V++AD ++ R
Sbjct: 223 YLMRDELKQSRGCGFVNFSHRDMAMAAINALNGIYTMKGCDQPLTVRFADPKRPR 277
>gi|13123778|ref|NP_064565.1| CUGBP Elav-like family member 4 isoform 1 [Homo sapiens]
gi|397520308|ref|XP_003830262.1| PREDICTED: CUGBP Elav-like family member 4 isoform 1 [Pan paniscus]
gi|403265036|ref|XP_003924762.1| PREDICTED: CUGBP Elav-like family member 4 [Saimiri boliviensis
boliviensis]
gi|426385818|ref|XP_004059398.1| PREDICTED: CUGBP Elav-like family member 4 isoform 2 [Gorilla
gorilla gorilla]
gi|74761348|sp|Q9BZC1.1|CELF4_HUMAN RecName: Full=CUGBP Elav-like family member 4; Short=CELF-4;
AltName: Full=Bruno-like protein 4; AltName:
Full=CUG-BP- and ETR-3-like factor 4; AltName:
Full=RNA-binding protein BRUNOL-4
gi|152013395|sp|Q5NVC8.2|CELF4_PONAB RecName: Full=CUGBP Elav-like family member 4; Short=CELF-4;
AltName: Full=Bruno-like protein 4; AltName:
Full=CUG-BP- and ETR-3-like factor 4; AltName:
Full=RNA-binding protein BRUNOL-4
gi|12746394|gb|AAK07475.1|AF329265_1 CUG-BP and ETR-3 like factor 4 [Homo sapiens]
gi|119621802|gb|EAX01397.1| bruno-like 4, RNA binding protein (Drosophila), isoform CRA_d [Homo
sapiens]
Length = 486
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 121/198 (61%), Gaps = 10/198 (5%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVS 120
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVR 169
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+
Sbjct: 170 RLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 229
Query: 181 ADTEKERQARRAQKAQSQ 198
ADT+KER RR Q+ Q
Sbjct: 230 ADTDKERTMRRMQQMAGQ 247
>gi|62087714|dbj|BAD92304.1| bruno-like 5, RNA binding protein variant [Homo sapiens]
Length = 421
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 92/216 (42%), Positives = 129/216 (59%), Gaps = 12/216 (5%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ ++KD T +GC F+ +R A KA
Sbjct: 55 DAIKLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKA 114
Query: 73 VNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I +
Sbjct: 115 QTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDE 174
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG +SKGCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 175 CTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRR 234
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGY 227
Q+ Q L PSL LP PY+ Y
Sbjct: 235 MQQMVGQLGIL------TPSL--TLPFS---PYSAY 259
>gi|187761299|ref|NP_001020258.1| CUGBP Elav-like family member 4 isoform 2 [Homo sapiens]
Length = 485
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 121/198 (61%), Gaps = 10/198 (5%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVS 120
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVR 169
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+
Sbjct: 170 RLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 229
Query: 181 ADTEKERQARRAQKAQSQ 198
ADT+KER RR Q+ Q
Sbjct: 230 ADTDKERTMRRMQQMAGQ 247
>gi|344269050|ref|XP_003406368.1| PREDICTED: CUGBP Elav-like family member 4-like isoform 2
[Loxodonta africana]
Length = 486
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 121/198 (61%), Gaps = 10/198 (5%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVS 120
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVR 169
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+
Sbjct: 170 RLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 229
Query: 181 ADTEKERQARRAQKAQSQ 198
ADT+KER RR Q+ Q
Sbjct: 230 ADTDKERTMRRMQQMAGQ 247
>gi|152013394|sp|Q7TSY6.2|CELF4_MOUSE RecName: Full=CUGBP Elav-like family member 4; Short=CELF-4;
AltName: Full=Bruno-like protein 4; AltName:
Full=CUG-BP- and ETR-3-like factor 4; AltName:
Full=RNA-binding protein BRUNOL-4
Length = 486
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 121/198 (61%), Gaps = 10/198 (5%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVS 120
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVR 169
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+
Sbjct: 170 RLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 229
Query: 181 ADTEKERQARRAQKAQSQ 198
ADT+KER RR Q+ Q
Sbjct: 230 ADTDKERTMRRMQQMAGQ 247
>gi|432852724|ref|XP_004067353.1| PREDICTED: CUGBP Elav-like family member 3-A-like isoform 3
[Oryzias latipes]
Length = 454
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R+ A
Sbjct: 38 DHDAIKLFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 98 KAQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFETFGQIE 157
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LRG SKGCAF+K+ + +A AA+ +++G M G+S LVVK+ADT+KER R
Sbjct: 158 ECTVLRGPDGASKGCAFVKFSSHAEAQAAINSLHGGQTMPGASSSLVVKFADTDKERTLR 217
Query: 191 RAQKAQSQ 198
R + Q
Sbjct: 218 RMHQMAGQ 225
>gi|348500286|ref|XP_003437704.1| PREDICTED: CUGBP Elav-like family member 3-A-like [Oreochromis
niloticus]
Length = 481
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R+ A
Sbjct: 38 DHDAIKLFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 98 KAQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFETFGQIE 157
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LRG SKGCAF+K+ + +A AA+ +++G M G+S LVVK+ADT+KER R
Sbjct: 158 ECTVLRGPDGASKGCAFVKFSSHAEAQAAINSLHGGQTMPGASSSLVVKFADTDKERTLR 217
Query: 191 RAQKAQSQ 198
R + Q
Sbjct: 218 RMHQMAGQ 225
>gi|432852720|ref|XP_004067351.1| PREDICTED: CUGBP Elav-like family member 3-A-like isoform 1
[Oryzias latipes]
Length = 481
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R+ A
Sbjct: 38 DHDAIKLFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 98 KAQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFETFGQIE 157
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LRG SKGCAF+K+ + +A AA+ +++G M G+S LVVK+ADT+KER R
Sbjct: 158 ECTVLRGPDGASKGCAFVKFSSHAEAQAAINSLHGGQTMPGASSSLVVKFADTDKERTLR 217
Query: 191 RAQKAQSQ 198
R + Q
Sbjct: 218 RMHQMAGQ 225
>gi|289547698|ref|NP_001166144.1| CUGBP Elav-like family member 5 isoform 2 [Homo sapiens]
Length = 409
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 92/216 (42%), Positives = 129/216 (59%), Gaps = 12/216 (5%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ ++KD T +GC F+ +R A KA
Sbjct: 43 DAIKLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKA 102
Query: 73 VNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I +
Sbjct: 103 QTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDE 162
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG +SKGCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 163 CTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRR 222
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGY 227
Q+ Q L PSL LP PY+ Y
Sbjct: 223 MQQMVGQLGIL------TPSL--TLPFS---PYSAY 247
>gi|432852722|ref|XP_004067352.1| PREDICTED: CUGBP Elav-like family member 3-A-like isoform 2
[Oryzias latipes]
Length = 493
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 121/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R+ A KA
Sbjct: 40 DAIKLFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKA 99
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I++
Sbjct: 100 QSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFETFGQIEEC 159
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG SKGCAF+K+ + +A AA+ +++G M G+S LVVK+ADT+KER RR
Sbjct: 160 TVLRGPDGASKGCAFVKFSSHAEAQAAINSLHGGQTMPGASSSLVVKFADTDKERTLRRM 219
Query: 193 QKAQSQ 198
+ Q
Sbjct: 220 HQMAGQ 225
>gi|118103587|ref|XP_001231325.1| PREDICTED: CUGBP, Elav-like family member 4 isoform 2 [Gallus
gallus]
Length = 483
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 121/198 (61%), Gaps = 10/198 (5%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 48 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 107
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVS 120
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V
Sbjct: 108 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSCCLRQPCTKDRKLFVGMLNKQQSEDDVR 167
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+
Sbjct: 168 RLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 227
Query: 181 ADTEKERQARRAQKAQSQ 198
ADT+KER RR Q+ Q
Sbjct: 228 ADTDKERTMRRMQQMAGQ 245
>gi|351711625|gb|EHB14544.1| CUG-BP- and ETR-3-like factor 4 [Heterocephalus glaber]
Length = 702
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 84/196 (42%), Positives = 121/196 (61%), Gaps = 10/196 (5%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A KA
Sbjct: 217 DAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKA 276
Query: 73 VNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVSAL 122
+A H +KTLPG + P+QVK AD E + KLF+GML K SE +V L
Sbjct: 277 QSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRL 336
Query: 123 FSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
F +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+AD
Sbjct: 337 FEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFAD 396
Query: 183 TEKERQARRAQKAQSQ 198
T+KER RR Q+ Q
Sbjct: 397 TDKERTMRRMQQMAGQ 412
>gi|208022666|ref|NP_001129075.1| CUG-BP- and ETR-3-like factor 5 [Rattus norvegicus]
Length = 395
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 92/217 (42%), Positives = 129/217 (59%), Gaps = 12/217 (5%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ ++KD T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLHEQDLKPLFEQFGRIYELTVLKDPHTGVHKGCAFLTYCARDSAIKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I +
Sbjct: 65 QTALHEQKTLPGMARPIQVKPADSENRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDE 124
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG +SKGCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 125 CTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRR 184
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 228
Q+ Q L PSL LP PY+ Y
Sbjct: 185 MQQMVGQLGIL------TPSL--TLPFS---PYSAYA 210
>gi|432852726|ref|XP_004067354.1| PREDICTED: CUGBP Elav-like family member 3-A-like isoform 4
[Oryzias latipes]
Length = 494
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R+ A
Sbjct: 38 DHDAIKLFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 98 KAQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFETFGQIE 157
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LRG SKGCAF+K+ + +A AA+ +++G M G+S LVVK+ADT+KER R
Sbjct: 158 ECTVLRGPDGASKGCAFVKFSSHAEAQAAINSLHGGQTMPGASSSLVVKFADTDKERTLR 217
Query: 191 RAQKAQSQ 198
R + Q
Sbjct: 218 RMHQMAGQ 225
>gi|417400799|gb|JAA47323.1| Putative rna-binding protein cugbp1/bruno rrm superfamily [Desmodus
rotundus]
Length = 429
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 120/197 (60%), Gaps = 9/197 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELER---------LEHKLFIGMLPKNVSEAEVSA 121
KA +A H +KTLPG + P+QVK AD E KLF+GML K SE +V
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSHRKLFVGMLNKQQSEDDVRR 169
Query: 122 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+A
Sbjct: 170 LFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFA 229
Query: 182 DTEKERQARRAQKAQSQ 198
DT+KER RR Q+ Q
Sbjct: 230 DTDKERTMRRMQQMAGQ 246
>gi|363742941|ref|XP_428898.3| PREDICTED: CUGBP Elav-like family member 3 isoform 3 [Gallus
gallus]
Length = 401
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 85/186 (45%), Positives = 125/186 (67%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLSKQQADEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K+++ +A AA+ A++G + G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGCAFVKFQSHAEAQAAIAALHGSRTLPGASSSLVVKFADTEKERGLRRM 184
Query: 193 QKAQSQ 198
Q+ SQ
Sbjct: 185 QQVASQ 190
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K + + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLSKQQADEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S EA A+ A H +TLPGASS L VK+AD E ER
Sbjct: 144 SHAEAQAAIAALHGSRTLPGASSSLVVKFADTEKER 179
>gi|301769063|ref|XP_002919950.1| PREDICTED: CUGBP Elav-like family member 4-like [Ailuropoda
melanoleuca]
Length = 463
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 121/196 (61%), Gaps = 10/196 (5%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A KA
Sbjct: 52 DAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKA 111
Query: 73 VNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVSAL 122
+A H +KTLPG + P+QVK AD E + KLF+GML K SE +V L
Sbjct: 112 QSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRL 171
Query: 123 FSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
F +G I++ ILRG SKGCAF+KY + +A AA+ +++G M G+S LVVK+AD
Sbjct: 172 FEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINSLHGSQTMPGASSSLVVKFAD 231
Query: 183 TEKERQARRAQKAQSQ 198
T+KER RR Q+ Q
Sbjct: 232 TDKERTMRRMQQMAGQ 247
>gi|226371657|ref|NP_573458.2| CUGBP Elav-like family member 4 isoform D [Mus musculus]
Length = 484
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 120/197 (60%), Gaps = 9/197 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELER---------LEHKLFIGMLPKNVSEAEVSA 121
KA +A H +KTLPG + P+QVK AD E KLF+GML K SE +V
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSHRKLFVGMLNKQQSEDDVRR 169
Query: 122 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+A
Sbjct: 170 LFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFA 229
Query: 182 DTEKERQARRAQKAQSQ 198
DT+KER RR Q+ Q
Sbjct: 230 DTDKERTMRRMQQMAGQ 246
>gi|26339326|dbj|BAC33334.1| unnamed protein product [Mus musculus]
Length = 484
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 120/197 (60%), Gaps = 9/197 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELER---------LEHKLFIGMLPKNVSEAEVSA 121
KA +A H +KTLPG + P+QVK AD E KLF+GML K SE +V
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSHRKLFVGMLNKQQSEDDVRR 169
Query: 122 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+A
Sbjct: 170 LFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFA 229
Query: 182 DTEKERQARRAQKAQSQ 198
DT+KER RR Q+ Q
Sbjct: 230 DTDKERTMRRMQQMAGQ 246
>gi|149638168|ref|XP_001508614.1| PREDICTED: CUGBP Elav-like family member 3 isoform 1
[Ornithorhynchus anatinus]
Length = 446
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 120/188 (63%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 3 DHDAIKLFVGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARDSAL 62
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 63 KAQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFEPFGQIE 122
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ +++G M G+S LVVK+ADT+KER R
Sbjct: 123 ECTILRGPDGASKGCAFVKYGSHAEAQAAINSLHGSQTMPGASSSLVVKFADTDKERTLR 182
Query: 191 RAQKAQSQ 198
R + Q
Sbjct: 183 RMHQMAGQ 190
>gi|62089134|dbj|BAD93011.1| bruno-like 4, RNA binding protein variant [Homo sapiens]
Length = 510
Score = 167 bits (422), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 84/196 (42%), Positives = 121/196 (61%), Gaps = 10/196 (5%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A KA
Sbjct: 77 DAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKA 136
Query: 73 VNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVSAL 122
+A H +KTLPG + P+QVK AD E + KLF+GML K SE +V L
Sbjct: 137 QSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRL 196
Query: 123 FSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
F +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+AD
Sbjct: 197 FEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFAD 256
Query: 183 TEKERQARRAQKAQSQ 198
T+KER RR Q+ Q
Sbjct: 257 TDKERTMRRMQQMAGQ 272
>gi|207080190|ref|NP_001128833.1| CUGBP Elav-like family member 4 isoform 2 [Pongo abelii]
gi|55730138|emb|CAH91793.1| hypothetical protein [Pongo abelii]
Length = 456
Score = 167 bits (422), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 120/197 (60%), Gaps = 9/197 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELER---------LEHKLFIGMLPKNVSEAEVSA 121
KA +A H +KTLPG + P+QVK AD E KLF+GML K SE +V
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSHRKLFVGMLNKQQSEDDVRR 169
Query: 122 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+A
Sbjct: 170 LFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFA 229
Query: 182 DTEKERQARRAQKAQSQ 198
DT+KER RR Q+ Q
Sbjct: 230 DTDKERTMRRMQQMAGQ 246
>gi|33872777|gb|AAH04167.2| Bruno-like 4, RNA binding protein (Drosophila) [Homo sapiens]
gi|37515278|gb|AAH01946.2| Bruno-like 4, RNA binding protein (Drosophila) [Homo sapiens]
Length = 484
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 120/197 (60%), Gaps = 9/197 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELER---------LEHKLFIGMLPKNVSEAEVSA 121
KA +A H +KTLPG + P+QVK AD E KLF+GML K SE +V
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSHRKLFVGMLNKQQSEDDVRR 169
Query: 122 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+A
Sbjct: 170 LFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFA 229
Query: 182 DTEKERQARRAQKAQSQ 198
DT+KER RR Q+ Q
Sbjct: 230 DTDKERTMRRMQQMAGQ 246
>gi|187761301|ref|NP_001020259.1| CUGBP Elav-like family member 4 isoform 3 [Homo sapiens]
Length = 484
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 120/197 (60%), Gaps = 9/197 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELER---------LEHKLFIGMLPKNVSEAEVSA 121
KA +A H +KTLPG + P+QVK AD E KLF+GML K SE +V
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSHRKLFVGMLNKQQSEDDVRR 169
Query: 122 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+A
Sbjct: 170 LFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFA 229
Query: 182 DTEKERQARRAQKAQSQ 198
DT+KER RR Q+ Q
Sbjct: 230 DTDKERTMRRMQQMAGQ 246
>gi|148664596|gb|EDK97012.1| bruno-like 4, RNA binding protein (Drosophila), isoform CRA_c [Mus
musculus]
Length = 510
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 120/197 (60%), Gaps = 9/197 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 56 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELER---------LEHKLFIGMLPKNVSEAEVSA 121
KA +A H +KTLPG + P+QVK AD E KLF+GML K SE +V
Sbjct: 116 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSHRKLFVGMLNKQQSEDDVRR 175
Query: 122 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+A
Sbjct: 176 LFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFA 235
Query: 182 DTEKERQARRAQKAQSQ 198
DT+KER RR Q+ Q
Sbjct: 236 DTDKERTMRRMQQMAGQ 252
>gi|62858167|ref|NP_001016491.1| CUG-BP- and ETR-3-like factor 3 [Xenopus (Silurana) tropicalis]
gi|89272955|emb|CAJ83148.1| trinucleotide repeat containing 4 [Xenopus (Silurana) tropicalis]
Length = 313
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/184 (44%), Positives = 123/184 (66%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLF+GQ+P+++ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA +
Sbjct: 7 IKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALKAQS 66
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +G I + +
Sbjct: 67 ALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRRMFEPFGNIDECTV 126
Query: 135 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
LRG TSKGCAF+K++T +A AA+ A++G + G+S LVVK+ADTEKER RR Q+
Sbjct: 127 LRGPDGTSKGCAFVKFQTHTEAQAAINALHGSRTLPGASSSLVVKFADTEKERGLRRMQQ 186
Query: 195 AQSQ 198
+Q
Sbjct: 187 VANQ 190
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRRMFEPFGNIDECTVLRGPDGT---SKGCAFVKFQ 143
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+NA H +TLPGASS L VK+AD E ER
Sbjct: 144 THTEAQAAINALHGSRTLPGASSSLVVKFADTEKER 179
>gi|226371659|ref|NP_001139764.1| CUGBP Elav-like family member 4 isoform A [Mus musculus]
gi|29387384|gb|AAH48405.1| Brunol4 protein [Mus musculus]
Length = 504
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 120/197 (60%), Gaps = 9/197 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELER---------LEHKLFIGMLPKNVSEAEVSA 121
KA +A H +KTLPG + P+QVK AD E KLF+GML K SE +V
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSHRKLFVGMLNKQQSEDDVRR 169
Query: 122 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+A
Sbjct: 170 LFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFA 229
Query: 182 DTEKERQARRAQKAQSQ 198
DT+KER RR Q+ Q
Sbjct: 230 DTDKERTMRRMQQMAGQ 246
>gi|395501660|ref|XP_003755209.1| PREDICTED: CUGBP Elav-like family member 4-like [Sarcophilus
harrisii]
Length = 399
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 18 DHDAIKLFVGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGVHKGCAFLTYCARDSAL 77
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 78 KAQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEEDVRRLFEPFGQIE 137
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG TSKGCAF+K+ + +A AA+ +++G M G+S LVVK+ADT+KER R
Sbjct: 138 ECTILRGPDGTSKGCAFVKFGSHAEAQAAINSLHGSQTMPGASSSLVVKFADTDKERTLR 197
Query: 191 RAQKAQSQ 198
R + Q
Sbjct: 198 RMHQMAGQ 205
>gi|393906351|gb|EJD74254.1| HrETR-1 protein [Loa loa]
Length = 507
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/192 (44%), Positives = 120/192 (62%), Gaps = 6/192 (3%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F+ F + E I+KDK T +GC F+ R A +
Sbjct: 42 DTIKLFVGQIPRNLEEKDLRHLFETFGKIYEFTILKDKYTGLHKGCAFLTYCHRDSAVRC 101
Query: 73 VNACHNKKTLPGASSPLQVKYADGELE------RLEHKLFIGMLPKNVSEAEVSALFSIY 126
A H++KTLPG + +QVK AD E E KLF+GML K +E +V ALF+ +
Sbjct: 102 QAALHDQKTLPGMNRAMQVKPADNESRPDSPKNVEERKLFVGMLSKQHNEDDVRALFAPF 161
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 186
G I ++ +LRG+ SKGCAF+K+ T QA A+ A++G M G+S LVVK+ADTEKE
Sbjct: 162 GVIDEVTVLRGADGLSKGCAFVKFATHSQAAMAINALHGSQTMPGASSSLVVKFADTEKE 221
Query: 187 RQARRAQKAQSQ 198
RQ RR Q+ +Q
Sbjct: 222 RQLRRMQQMAAQ 233
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 3 ESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVI 62
ES+ + + E KLFVG + K E + A+F F ++DEV +++ S+GC FV
Sbjct: 126 ESRPDSPKNVEERKLFVGMLSKQHNEDDVRALFAPFGVIDEVTVLRG-ADGLSKGCAFVK 184
Query: 63 CPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ +A A+NA H +T+PGASS L VK+AD E ER
Sbjct: 185 FATHSQAAMAINALHGSQTMPGASSSLVVKFADTEKER 222
>gi|156352255|ref|XP_001622676.1| predicted protein [Nematostella vectensis]
gi|156209270|gb|EDO30576.1| predicted protein [Nematostella vectensis]
Length = 455
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 122/209 (58%), Gaps = 15/209 (7%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVGQVP+ E L +F+ + + E+ I+KDK T +GC F+ SR + A
Sbjct: 20 VKLFVGQVPRTWEEKDLRPIFEPYGQIYELTILKDKYTGQHKGCAFLTFCSRDACNAAQK 79
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
H KKTLPG P+QVK AD E + + KLF+GM+ K+ E ++ +FS +GTI++L +
Sbjct: 80 HLHEKKTLPGMHHPIQVKPADSETKSDDRKLFVGMISKHAKEEDLRVMFSPFGTIEELTV 139
Query: 135 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
LR + TSKGCAF+K+ + QA A+ ++ MEG S PLVVK+ADTEKE+ ++
Sbjct: 140 LRNADSTSKGCAFIKFANRMQAQNAIATMHNSTTMEGCSSPLVVKFADTEKEKLQKKM-- 197
Query: 195 AQSQANNLPNADSQHPSLFGALPMGYAPP 223
QH + FG + G A P
Sbjct: 198 -------------QHLAAFGGMAFGGASP 213
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
S++R KLFVG + KH E L MF F ++E+ ++++ + S+GC F+ +R +A
Sbjct: 105 SDDR-KLFVGMISKHAKEEDLRVMFSPFGTIEELTVLRNADS-TSKGCAFIKFANRMQAQ 162
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A+ HN T+ G SSPL VK+AD E E+L+ K+
Sbjct: 163 NAIATMHNSTTMEGCSSPLVVKFADTEKEKLQKKM 197
>gi|167521936|ref|XP_001745306.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776264|gb|EDQ89884.1| predicted protein [Monosiga brevicollis MX1]
Length = 389
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 121/190 (63%), Gaps = 3/190 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLF+GQ+P++ +E L +F EF + EV I++D+ T S+GC F+ +RQ A A
Sbjct: 15 DAMKLFIGQIPRNYSEEDLTHIFSEFGHIYEVMILRDRQTHNSKGCAFLTFTTRQAAVDA 74
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+ H K TLP S P+QVK AD + E KLF+GML + ++E ++ A F +G ++DL
Sbjct: 75 IERHHEKTTLPNMSHPMQVKIADTDQRNAERKLFVGMLARTMNEDDLRAKFGAFGHVEDL 134
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
ILR + +SKGCAF+K+ ++A +A+ ++ M+G P+VVK AD EK++Q R+
Sbjct: 135 TILRHADGSSKGCAFVKFSNADEAQSAIANLHHSETMDGCRSPIVVKVADNEKQKQHRKL 194
Query: 193 QKAQSQANNL 202
Q+ Q NN+
Sbjct: 195 QR---QLNNM 201
>gi|148664594|gb|EDK97010.1| bruno-like 4, RNA binding protein (Drosophila), isoform CRA_a [Mus
musculus]
Length = 485
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 120/197 (60%), Gaps = 9/197 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELER---------LEHKLFIGMLPKNVSEAEVSA 121
KA +A H +KTLPG + P+QVK AD E KLF+GML K SE +V
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSHRKLFVGMLNKQQSEDDVRR 169
Query: 122 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+A
Sbjct: 170 LFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFA 229
Query: 182 DTEKERQARRAQKAQSQ 198
DT+KER RR Q+ Q
Sbjct: 230 DTDKERTMRRMQQMAGQ 246
>gi|390344759|ref|XP_782270.3| PREDICTED: CUGBP Elav-like family member 1-A-like
[Strongylocentrotus purpuratus]
Length = 605
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 122/192 (63%), Gaps = 4/192 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+PK E +L MF EF V E+N+++DK T S+GC FV S ADKA
Sbjct: 55 DSLKMFVGQIPKAYEEDKLREMFSEFGPVYELNVLRDKKTGESKGCAFVTFYSGVVADKA 114
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
HN+K LPG P+Q+K AD E+E E KLF+GML K E++V +FS +G+I++
Sbjct: 115 QKELHNRKVLPGMRHPIQMKPADCEVE--ERKLFVGMLSKKCDESDVRIMFSAFGSIEEC 172
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
ILR KGCAF+ Y T++ AL + +++ M+G + LVVK+ADT+KE++ ++
Sbjct: 173 HILRDQMGGHKGCAFVTYATRQMALNCIRSMHQSRIMDGCTSKLVVKFADTQKEKEQKKL 232
Query: 193 QKAQSQA--NNL 202
Q+ Q NNL
Sbjct: 233 QQMAQQMCYNNL 244
>gi|340380143|ref|XP_003388583.1| PREDICTED: CUGBP Elav-like family member 4-like [Amphimedon
queenslandica]
Length = 494
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/213 (41%), Positives = 129/213 (60%), Gaps = 7/213 (3%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E VKLFVGQVPKH E L +++ + E+ I++ K TR +GC FV SR+ A+ A
Sbjct: 57 ESVKLFVGQVPKHFEEEDLRPYLEQYGPIGELLILRHKATRQHKGCAFVTYLSRESAELA 116
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
H+K LP + PLQV A + E L K+F+GML K + E+ V ++F +G I++L
Sbjct: 117 QRELHDKVILPTMTRPLQVNAAGTKQEELR-KVFVGMLSKTIDESHVRSMFERFGHIEEL 175
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+L+ S+GCAF+K+ ++++A +A+ ++G M G+S PLVVK+ADTE+ER AR+
Sbjct: 176 TVLKDKDGYSRGCAFIKFSSRQEAQSAINEMHGSEIMAGASNPLVVKYADTERERHARKM 235
Query: 193 QKAQSQANNLP-NADSQ---HPSLFGALPMGYA 221
QKA Q L N Q HP F P+ YA
Sbjct: 236 QKAMQQFAELSLNPVFQVLPHPQFFN--PIVYA 266
>gi|410912254|ref|XP_003969605.1| PREDICTED: CUGBP Elav-like family member 3-A-like [Takifugu
rubripes]
Length = 481
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 121/188 (64%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R+ A
Sbjct: 38 DHDAIKLFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 98 KAQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFESFGQIE 157
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LRG SKGCAF+K+ + +A AA+ +++G M G+S LVVK+ADT+KER R
Sbjct: 158 ECTVLRGPDGASKGCAFVKFSSHGEAQAAINSLHGGQTMPGASSSLVVKFADTDKERTLR 217
Query: 191 RAQKAQSQ 198
R + Q
Sbjct: 218 RMHQMAGQ 225
>gi|326675888|ref|XP_003200459.1| PREDICTED: CUGBP Elav-like family member 3-A-like [Danio rerio]
Length = 516
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 120/186 (64%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R+ A KA
Sbjct: 32 DAIKLFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKA 91
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E E KLF+GML K E +V LF +G I++
Sbjct: 92 QSALHEQKTLPGMNRPIQVKPADSEGRGEERKLFVGMLGKQQCEEDVRCLFEAFGQIEEC 151
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG SKGCAF+K+ + +A AA+ +++G M G+S LVVK+ADT+KER RR
Sbjct: 152 TVLRGPDGASKGCAFVKFSSHAEAQAAINSLHGGQTMPGASSSLVVKFADTDKERTLRRM 211
Query: 193 QKAQSQ 198
+ Q
Sbjct: 212 HQMAGQ 217
>gi|56403901|emb|CAI29735.1| hypothetical protein [Pongo abelii]
Length = 486
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/198 (41%), Positives = 120/198 (60%), Gaps = 10/198 (5%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVS 120
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVR 169
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LV K+
Sbjct: 170 RLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAISALHGSQTMPGASSSLVAKF 229
Query: 181 ADTEKERQARRAQKAQSQ 198
ADT+KER RR Q+ Q
Sbjct: 230 ADTDKERTMRRMQQMAGQ 247
>gi|345326924|ref|XP_003431098.1| PREDICTED: CUGBP Elav-like family member 3 isoform 3
[Ornithorhynchus anatinus]
Length = 447
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 121/189 (64%), Gaps = 1/189 (0%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 3 DHDAIKLFVGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARDSAL 62
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
KA +A H +KTLPG + P+QVK AD E +E KLF+GML K SE +V LF +G I
Sbjct: 63 KAQSALHEQKTLPGMNRPIQVKPADSEGHSVEDRKLFVGMLGKQQSEDDVRRLFEPFGQI 122
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ ILRG SKGCAF+KY + +A AA+ +++G M G+S LVVK+ADT+KER
Sbjct: 123 EECTILRGPDGASKGCAFVKYGSHAEAQAAINSLHGSQTMPGASSSLVVKFADTDKERTL 182
Query: 190 RRAQKAQSQ 198
RR + Q
Sbjct: 183 RRMHQMAGQ 191
>gi|432852728|ref|XP_004067355.1| PREDICTED: CUGBP Elav-like family member 3-A-like isoform 5
[Oryzias latipes]
Length = 443
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 121/186 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R+ A KA
Sbjct: 40 DAIKLFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKA 99
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I++
Sbjct: 100 QSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFETFGQIEEC 159
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG SKGCAF+K+ + +A AA+ +++G M G+S LVVK+ADT+KER RR
Sbjct: 160 TVLRGPDGASKGCAFVKFSSHAEAQAAINSLHGGQTMPGASSSLVVKFADTDKERTLRRM 219
Query: 193 QKAQSQ 198
+ Q
Sbjct: 220 HQMAGQ 225
>gi|170584368|ref|XP_001896973.1| RNA binding protein [Brugia malayi]
gi|158595662|gb|EDP34201.1| RNA binding protein, putative [Brugia malayi]
Length = 489
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 120/192 (62%), Gaps = 6/192 (3%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F+ F + E I+KDK T +GC F+ R A +
Sbjct: 24 DTIKLFVGQIPRNLEEKDLRHLFETFGKIYEFTILKDKYTGLHKGCAFLTYCHRDSAVRC 83
Query: 73 VNACHNKKTLPGASSPLQVKYADGELE------RLEHKLFIGMLPKNVSEAEVSALFSIY 126
A H++KTLPG + +QVK AD E E KLF+GML K +E +V +LF+ +
Sbjct: 84 QAALHDQKTLPGMNRAMQVKPADNESRPESPKNAEERKLFVGMLSKQHNEDDVRSLFAPF 143
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 186
G I ++ +LRG+ SKGCAF+K+ T QA A+ A++G M G+S LVVK+ADTEKE
Sbjct: 144 GVIDEVTVLRGADGLSKGCAFVKFATHSQAAMAINALHGSQTMPGASSSLVVKFADTEKE 203
Query: 187 RQARRAQKAQSQ 198
RQ RR Q+ +Q
Sbjct: 204 RQLRRMQQMAAQ 215
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 3 ESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVI 62
ES+ E + E KLFVG + K E + ++F F ++DEV +++ S+GC FV
Sbjct: 108 ESRPESPKNAEERKLFVGMLSKQHNEDDVRSLFAPFGVIDEVTVLRG-ADGLSKGCAFVK 166
Query: 63 CPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ +A A+NA H +T+PGASS L VK+AD E ER
Sbjct: 167 FATHSQAAMAINALHGSQTMPGASSSLVVKFADTEKER 204
>gi|148228597|ref|NP_001084196.1| CUGBP Elav-like family member 1-A [Xenopus laevis]
gi|82227733|sp|O57406.1|CEL1A_XENLA RecName: Full=CUGBP Elav-like family member 1-A; Short=CELF-1A;
AltName: Full=Bruno-like protein 2-A; AltName: Full=CUG
triplet repeat RNA-binding protein 1-A; Short=CUG-BP1-A;
AltName: Full=CUG-BP- and ETR-3-like factor 1-A;
AltName: Full=Embryo deadenylation element-binding
protein A; Short=EDEN-BP-A; AltName: Full=RNA-binding
protein BRUNOL-2-A; AltName: Full=p53/p55
gi|2781419|gb|AAC41243.1| embryo deadenylation element binding protein [Xenopus laevis]
gi|80478529|gb|AAI08575.1| CUGBP1 protein [Xenopus laevis]
Length = 489
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 132/206 (64%), Gaps = 4/206 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E +L +F+++ V E+N+++D++ S+GCCF+ +R+ A
Sbjct: 14 DSIKMFVGQVPRSWSEKELRELFEQYGAVYEINVLRDRSQNPPQSKGCCFITFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ KN +E ++ A+FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMVSKNCNENDIRAMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A+++++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGMSRGCAFVTFTTRSMAQMAIKSMHQAQTMEGCSSPIVVKFADTQKDKE 193
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFG 214
+R + Q NA S +L G
Sbjct: 194 QKRMTQQLQQQMQQLNAASMWGNLTG 219
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K+ E + AMF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMVSKNCNENDIRAMFSPFGQIEECRILRGPDGM-SRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ + H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRSMAQMAIKSMHQAQTMEGCSSPIVVKFADTQKDKEQKRM 197
>gi|281337967|gb|EFB13551.1| hypothetical protein PANDA_012783 [Ailuropoda melanoleuca]
Length = 462
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/216 (42%), Positives = 129/216 (59%), Gaps = 12/216 (5%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E+ ++KD T +GC F+ +R A KA
Sbjct: 23 DAIKLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKA 82
Query: 73 VNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I +
Sbjct: 83 QTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDE 142
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG +SKGCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 143 CTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRR 202
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGY 227
Q+ Q L PSL LP PY+ Y
Sbjct: 203 MQQMVGQLGIL------TPSL--TLPFS---PYSAY 227
>gi|357155243|ref|XP_003577055.1| PREDICTED: flowering time control protein FCA-like [Brachypodium
distachyon]
Length = 749
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F + V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 127 VKLFVGSVPRTANEDDVRPLFADHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 186
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +FS +G ++D
Sbjct: 187 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFSPFGHVED 246
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 247 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYVMRGCEQPLIVRFADPKRPR 302
>gi|197097518|ref|NP_001127577.1| CUGBP Elav-like family member 4 isoform 1 [Pongo abelii]
gi|55732010|emb|CAH92712.1| hypothetical protein [Pongo abelii]
Length = 457
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 119/197 (60%), Gaps = 9/197 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYSERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELER---------LEHKLFIGMLPKNVSEAEVSA 121
KA +A H +KTLPG + P+QVK AD E KL +GML K SE +V
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSHRKLLVGMLNKQQSEDDVRR 169
Query: 122 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+A
Sbjct: 170 LFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFA 229
Query: 182 DTEKERQARRAQKAQSQ 198
DT+KER RR Q+ Q
Sbjct: 230 DTDKERTMRRMQQMAGQ 246
>gi|358413030|ref|XP_610805.5| PREDICTED: CUGBP, Elav-like family member 5 [Bos taurus]
Length = 562
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 91/216 (42%), Positives = 129/216 (59%), Gaps = 12/216 (5%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E+ ++KD T +GC F+ +R A KA
Sbjct: 120 DAIKLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKA 179
Query: 73 VNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I +
Sbjct: 180 QTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDE 239
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG +SKGCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 240 CTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRR 299
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGY 227
Q+ Q L PSL LP PY+ Y
Sbjct: 300 MQQMVGQLGIL------TPSL--TLPFS---PYSAY 324
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 95 DGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETK 153
DG + KLF+G +P+N+ E ++ LF +G I +L +L+ KGCAFL Y +
Sbjct: 114 DGTKDLDAIKLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCAR 173
Query: 154 EQALAALEAINGKHKMEGSSVPLVVKWADTE 184
+ A+ A A++ + + G + P+ VK AD+E
Sbjct: 174 DSAIKAQTALHEQKTLPGMARPIQVKPADSE 204
>gi|32482079|gb|AAP84395.1| FCA protein [Triticum aestivum]
Length = 734
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 117 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 176
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 177 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 236
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PLVV++AD ++ R
Sbjct: 237 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLVVRFADPKRPR 292
>gi|348667006|gb|EGZ06832.1| hypothetical protein PHYSODRAFT_353005 [Phytophthora sojae]
Length = 507
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/175 (47%), Positives = 118/175 (67%), Gaps = 2/175 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVGQVP+ M E L + + F ++++ II+DK T A RGC F +R A+KAV
Sbjct: 36 VKLFVGQVPRTMEEDDLRPVLEVFGPLEDLVIIRDKITGAHRGCAFASYFTRDAAEKAVQ 95
Query: 75 ACHNKKTLPGASSPLQVKYADGEL-ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQ 133
HNK TLP + +PLQV+ A+G+ EHKLFIGM+PK EA + +F ++GTI+++
Sbjct: 96 ELHNKVTLPQSINPLQVRPAEGQAGASQEHKLFIGMIPKTADEAAIREVFELFGTIEEVY 155
Query: 134 ILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
ILR + SKGCAFLK++ + ALAA+E +NG M+ + PLVVK+AD+ ++R
Sbjct: 156 ILRHPATGQSKGCAFLKFKERSSALAAIEEVNGNVTMDRGTSPLVVKFADSRRQR 210
>gi|449668124|ref|XP_002167931.2| PREDICTED: CUGBP Elav-like family member 2-like [Hydra
magnipapillata]
Length = 511
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 125/190 (65%), Gaps = 3/190 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E KLF+GQVP++ TE +L + + + + E++I+ DK T +GC F++ ++ A++
Sbjct: 19 EACKLFIGQVPRNWTEKELRPILEPYGEIHELSILYDKYTGQHKGCAFLVFYEKEAANRC 78
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
N H K+TLPG+ + +QVK A+ E++ + KLFIGML K ++E ++ +FS YGTI++L
Sbjct: 79 QNELHEKRTLPGSVNKMQVKPAESEIKTEDRKLFIGMLSKKLNEDDLRIMFSPYGTIEEL 138
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
ILR SKGCAF+KY T+ QA A++A++ ME S P+VVK ADTE+E+ +R
Sbjct: 139 TILRNPDGGSKGCAFIKYSTRLQAQNAIKAMHNSQTMENCSSPVVVKIADTEREKIQKR- 197
Query: 193 QKAQSQANNL 202
QS A NL
Sbjct: 198 --MQSMATNL 205
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
E + E KLF+G + K + E L MF + ++E+ I+++ S+GC F+ +R
Sbjct: 101 ESEIKTEDRKLFIGMLSKKLNEDDLRIMFSPYGTIEELTILRNPDG-GSKGCAFIKYSTR 159
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+A A+ A HN +T+ SSP+ VK AD E E+++ ++
Sbjct: 160 LQAQNAIKAMHNSQTMENCSSPVVVKIADTEREKIQKRM 198
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%)
Query: 3 ESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVI 62
++K+ +K + LF+ +P+ T+A L+ F F V + DK T S+ FV
Sbjct: 413 QAKQPQKEGPDGANLFIYHLPQEFTDADLMQTFMPFGNVVSAKVFIDKPTLLSKCFGFVS 472
Query: 63 CPSRQEADKAVNACH 77
+ A A+NA H
Sbjct: 473 YDNSLSATNAINAMH 487
>gi|359322160|ref|XP_854891.3| PREDICTED: CUGBP, Elav-like family member 5 [Canis lupus
familiaris]
Length = 485
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 91/216 (42%), Positives = 129/216 (59%), Gaps = 12/216 (5%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E+ ++KD T +GC F+ +R A KA
Sbjct: 43 DAIKLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKA 102
Query: 73 VNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I +
Sbjct: 103 QTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDE 162
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG +SKGCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 163 CTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRR 222
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGY 227
Q+ Q L PSL LP PY+ Y
Sbjct: 223 MQQMVGQLGIL------TPSL--TLPFS---PYSAY 247
>gi|395831373|ref|XP_003788777.1| PREDICTED: CUGBP Elav-like family member 5 [Otolemur garnettii]
Length = 485
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 91/216 (42%), Positives = 129/216 (59%), Gaps = 12/216 (5%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E+ ++KD T +GC F+ +R A KA
Sbjct: 43 DAIKLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKA 102
Query: 73 VNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I +
Sbjct: 103 QTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDE 162
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+LRG +SKGCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 163 CTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRR 222
Query: 192 AQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGY 227
Q+ Q L PSL LP PY+ Y
Sbjct: 223 MQQMVGQLGIL------TPSL--TLPFS---PYSAY 247
>gi|22760138|dbj|BAC11082.1| unnamed protein product [Homo sapiens]
Length = 484
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 120/197 (60%), Gaps = 9/197 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+G++P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGRIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELER---------LEHKLFIGMLPKNVSEAEVSA 121
KA +A H +KTLPG + P+QVK AD E KLF+GML K SE +V
Sbjct: 110 KAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSHRKLFVGMLNKQQSEEDVRR 169
Query: 122 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+A
Sbjct: 170 LFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGGQTMPGASSSLVVKFA 229
Query: 182 DTEKERQARRAQKAQSQ 198
DT+KER RR Q+ Q
Sbjct: 230 DTDKERMMRRMQQMAGQ 246
>gi|32482371|gb|AAP84378.1| FCA protein [Triticum aestivum]
Length = 736
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 119 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRNTGEQQGCCFVKYATSEEAERAIR 178
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 179 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 238
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 239 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 294
>gi|410920283|ref|XP_003973613.1| PREDICTED: CUGBP Elav-like family member 4-like [Takifugu rubripes]
Length = 530
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 82/194 (42%), Positives = 121/194 (62%), Gaps = 6/194 (3%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R+ A
Sbjct: 47 DHDAIKLFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESAL 106
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA NA H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 107 KAQNALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFESFGCIE 166
Query: 131 DLQILRGSQQTSKG------CAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
+ ILRG SKG C+ +K+ + +A AA+ A++G M G+S LVVK+ADT+
Sbjct: 167 ECTILRGPDGNSKGELGAASCSIVKFSSHAEAQAAISALHGSQTMPGASSSLVVKFADTD 226
Query: 185 KERQARRAQKAQSQ 198
KER RR Q+ Q
Sbjct: 227 KERTIRRMQQMAGQ 240
>gi|324501916|gb|ADY40847.1| CUGBP Elav family member 4 [Ascaris suum]
Length = 501
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 119/192 (61%), Gaps = 6/192 (3%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F+ F + E I+KDK T +GC F+ R A +
Sbjct: 31 DAIKLFVGQIPRNLEEKDLRHLFESFGKIYEFTILKDKYTGLHKGCAFLTYCHRDSALRC 90
Query: 73 VNACHNKKTLPGASSPLQVKYADGELE------RLEHKLFIGMLPKNVSEAEVSALFSIY 126
A H++KTLPG + +QVK AD E E KLF+GML K +E +V ALF+ +
Sbjct: 91 QAALHDQKTLPGMNRAMQVKPADSESRPNSPKNAEERKLFVGMLSKQQNEDDVRALFAPF 150
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 186
G I ++ +LRG+ SKGCAF+K+ QA A+ A++G M G+S LVVK+ADTEKE
Sbjct: 151 GAIDEVTVLRGADGLSKGCAFVKFAAHSQAAMAISALHGSQTMPGASSSLVVKFADTEKE 210
Query: 187 RQARRAQKAQSQ 198
RQ RR Q+ +Q
Sbjct: 211 RQLRRMQQMAAQ 222
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
K++EER KLFVG + K E + A+F F +DEV +++ S+GC FV + +
Sbjct: 122 KNAEER-KLFVGMLSKQQNEDDVRALFAPFGAIDEVTVLRG-ADGLSKGCAFVKFAAHSQ 179
Query: 69 ADKAVNACHNKKTLPGASSPLQVKYADGELER 100
A A++A H +T+PGASS L VK+AD E ER
Sbjct: 180 AAMAISALHGSQTMPGASSSLVVKFADTEKER 211
>gi|363744097|ref|XP_003642972.1| PREDICTED: CUGBP, Elav-like family member 4 [Gallus gallus]
Length = 495
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 120/191 (62%), Gaps = 3/191 (1%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQE 68
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ S GC F+ R+
Sbjct: 48 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRAQLPLKSMGCAFLTYCERES 107
Query: 69 ADKAVNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYG 127
A KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G
Sbjct: 108 ALKAQSALHEQKTLPGMNRPIQVKPADSESRGGKDRKLFVGMLNKQQSEDDVRRLFEAFG 167
Query: 128 TIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER
Sbjct: 168 NIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKER 227
Query: 188 QARRAQKAQSQ 198
RR Q+ Q
Sbjct: 228 TMRRMQQMAGQ 238
>gi|32482142|gb|AAP84417.1| FCA-A1 [Triticum aestivum]
gi|32482144|gb|AAP84418.1| FCA-A2 [Triticum aestivum]
Length = 741
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 124 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 183
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 184 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 243
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 244 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 299
>gi|32482390|gb|AAP84384.1| FCA protein [Triticum aestivum]
Length = 737
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 120 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 179
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 180 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 239
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 240 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 295
>gi|32482147|gb|AAP84419.1| FCA-B2 [Triticum aestivum]
Length = 740
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 122 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 181
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 182 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 241
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 242 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 297
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Query: 93 YADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR----GSQQTSKGCAFL 148
Y+D + + KLF+G +P+ +E +V LF +G + ++ ++R G QQ GC F+
Sbjct: 112 YSDHDNKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQ---GCCFV 168
Query: 149 KYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
KY T E+A A+ A++ + + G+ P+ V++AD EKER
Sbjct: 169 KYATSEEAERAIRALHNQCTIPGAMGPVQVRYADGEKER 207
>gi|32482140|gb|AAP84416.1| FCA protein, partial [Triticum aestivum]
Length = 740
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 120 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 179
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 180 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 239
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 240 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 295
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Query: 93 YADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR----GSQQTSKGCAFL 148
Y+D + + KLF+G +P+ +E +V LF +G + ++ ++R G QQ GC F+
Sbjct: 110 YSDHDNKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQ---GCCFV 166
Query: 149 KYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
KY T E+A A+ A++ + + G+ P+ V++AD EKER
Sbjct: 167 KYATSEEAERAIRALHNQCTIPGAMGPVQVRYADGEKER 205
>gi|32482081|gb|AAP84396.1| FCA protein [Triticum aestivum]
Length = 719
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 116 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 175
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 176 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 235
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 236 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 291
>gi|32482114|gb|AAP84409.1| FCA protein [Triticum aestivum]
Length = 736
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 119 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 178
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 179 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 238
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 239 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 294
>gi|363744095|ref|XP_003642971.1| PREDICTED: CUGBP, Elav-like family member 4 [Gallus gallus]
Length = 496
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 120/192 (62%), Gaps = 4/192 (2%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQE 68
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ S GC F+ R+
Sbjct: 48 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRAQLPLKSMGCAFLTYCERES 107
Query: 69 ADKAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIY 126
A KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +
Sbjct: 108 ALKAQSALHEQKTLPGMNRPIQVKPADSESRGAVEDRKLFVGMLNKQQSEDDVRRLFEAF 167
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 186
G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KE
Sbjct: 168 GNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKE 227
Query: 187 RQARRAQKAQSQ 198
R RR Q+ Q
Sbjct: 228 RTMRRMQQMAGQ 239
>gi|324505949|gb|ADY42547.1| CUGBP Elav family member 4 [Ascaris suum]
Length = 476
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 119/192 (61%), Gaps = 6/192 (3%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F+ F + E I+KDK T +GC F+ R A +
Sbjct: 31 DAIKLFVGQIPRNLEEKDLRHLFESFGKIYEFTILKDKYTGLHKGCAFLTYCHRDSALRC 90
Query: 73 VNACHNKKTLPGASSPLQVKYADGELE------RLEHKLFIGMLPKNVSEAEVSALFSIY 126
A H++KTLPG + +QVK AD E E KLF+GML K +E +V ALF+ +
Sbjct: 91 QAALHDQKTLPGMNRAMQVKPADSESRPNSPKNAEERKLFVGMLSKQQNEDDVRALFAPF 150
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 186
G I ++ +LRG+ SKGCAF+K+ QA A+ A++G M G+S LVVK+ADTEKE
Sbjct: 151 GAIDEVTVLRGADGLSKGCAFVKFAAHSQAAMAISALHGSQTMPGASSSLVVKFADTEKE 210
Query: 187 RQARRAQKAQSQ 198
RQ RR Q+ +Q
Sbjct: 211 RQLRRMQQMAAQ 222
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
K++EER KLFVG + K E + A+F F +DEV +++ S+GC FV + +
Sbjct: 122 KNAEER-KLFVGMLSKQQNEDDVRALFAPFGAIDEVTVLRG-ADGLSKGCAFVKFAAHSQ 179
Query: 69 ADKAVNACHNKKTLPGASSPLQVKYADGELER 100
A A++A H +T+PGASS L VK+AD E ER
Sbjct: 180 AAMAISALHGSQTMPGASSSLVVKFADTEKER 211
>gi|32482094|gb|AAP84400.1| FCA protein [Triticum aestivum]
Length = 737
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 119 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 178
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 179 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 238
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 239 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 294
>gi|328871825|gb|EGG20195.1| hypothetical protein DFA_07315 [Dictyostelium fasciculatum]
Length = 551
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 78/177 (44%), Positives = 117/177 (66%), Gaps = 2/177 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFA-LVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
VK+F+GQ+PK TE L MF +F ++E+ +I++K T+ +GC F+ + A+K++
Sbjct: 5 VKIFIGQIPKSFTEDDLREMFADFVDSIEEIKVIRNKATQEPQGCAFITMTNPDVAEKSI 64
Query: 74 NACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQ 133
HN K PG S+ LQVKYAD E E+L KLF+GMLPK +E +V LFS YG + ++
Sbjct: 65 QQLHNSKKFPGVSNFLQVKYADSEQEKLSTKLFVGMLPKEYNEDDVRKLFSDYGDVDEIC 124
Query: 134 ILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
ILRG SK C F+K++++E L A+ ++NG ++ S LVVK+ADTEK+R+ +
Sbjct: 125 ILRGPNNQSKSCGFIKFQSRESCLNAISSLNG-IRIPPSPHNLVVKFADTEKDRKNK 180
>gi|32482092|gb|AAP84399.1| FCA protein [Triticum aestivum]
Length = 740
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 124 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 183
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 184 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 243
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 244 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 299
>gi|32482106|gb|AAP84405.1| FCA protein [Triticum aestivum]
Length = 735
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 118 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 177
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 178 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 237
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD + R
Sbjct: 238 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPRRPR 293
>gi|32482123|gb|AAP84412.1| FCA protein, partial [Triticum aestivum]
Length = 737
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 120 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 179
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 180 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 239
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 240 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 295
>gi|32482125|gb|AAP84413.1| FCA protein, partial [Triticum aestivum]
Length = 722
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 114 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 173
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 174 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 233
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 234 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 289
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Query: 93 YADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR----GSQQTSKGCAFL 148
Y+D + + KLF+G +P+ +E +V LF +G + ++ ++R G QQ GC F+
Sbjct: 104 YSDHDNKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQ---GCCFV 160
Query: 149 KYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
KY T E+A A+ A++ + + G+ P+ V++AD EKER
Sbjct: 161 KYATSEEAERAIRALHNQCTIPGAMGPVQVRYADGEKER 199
>gi|32482108|gb|AAP84406.1| FCA protein [Triticum aestivum]
Length = 724
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 107 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 166
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 167 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 226
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 227 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 282
>gi|301100224|ref|XP_002899202.1| CUG-BP- and ETR-3-like factor, putative [Phytophthora infestans
T30-4]
gi|262104119|gb|EEY62171.1| CUG-BP- and ETR-3-like factor, putative [Phytophthora infestans
T30-4]
Length = 496
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 119/178 (66%), Gaps = 2/178 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVGQVP+ M E L + + F ++++ II+DK T A RGC F +R A+KAV
Sbjct: 32 VKLFVGQVPRTMEEDDLRPVLEVFGPLEDLVIIRDKITGAHRGCAFASYFTRDAAEKAVQ 91
Query: 75 ACHNKKTLPGASSPLQVKYADGEL-ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQ 133
HNK TLP + +PLQV+ A+G+ EHKLFIGM+PK EA + +F ++G+I+++
Sbjct: 92 ELHNKVTLPQSINPLQVRPAEGQAGASQEHKLFIGMIPKTADEAAIRDVFELFGSIEEVY 151
Query: 134 ILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
ILR + SKGCAFLK++ + ALAA+E +NG M+ + PLVVK+AD+ ++R R
Sbjct: 152 ILRHPATGQSKGCAFLKFKERSSALAAIEEVNGIVTMDRGTSPLVVKFADSRRQRLQR 209
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 93 YADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYE 151
YAD + KLF+G +P+ + E ++ + ++G ++DL I+R +GCAF Y
Sbjct: 22 YADPQQHNGPVKLFVGQVPRTMEEDDLRPVLEVFGPLEDLVIIRDKITGAHRGCAFASYF 81
Query: 152 TKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
T++ A A++ ++ K + S PL V+ A+
Sbjct: 82 TRDAAEKAVQELHNKVTLPQSINPLQVRPAE 112
>gi|345326922|ref|XP_003431097.1| PREDICTED: CUGBP Elav-like family member 3 isoform 2
[Ornithorhynchus anatinus]
Length = 448
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 85/192 (44%), Positives = 122/192 (63%), Gaps = 6/192 (3%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 3 DHDAIKLFVGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARDSAL 62
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGE----LERLEHKLFIGMLPKNVSEAEVSALFSIY 126
KA +A H +KTLPG + P+QVK AD E LE + KLF+GML K SE +V LF +
Sbjct: 63 KAQSALHEQKTLPGMNRPIQVKPADSEGRGALE--DRKLFVGMLGKQQSEDDVRRLFEPF 120
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 186
G I++ ILRG SKGCAF+KY + +A AA+ +++G M G+S LVVK+ADT+KE
Sbjct: 121 GQIEECTILRGPDGASKGCAFVKYGSHAEAQAAINSLHGSQTMPGASSSLVVKFADTDKE 180
Query: 187 RQARRAQKAQSQ 198
R RR + Q
Sbjct: 181 RTLRRMHQMAGQ 192
>gi|32482074|gb|AAP84393.1| FCA protein [Triticum aestivum]
Length = 724
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 107 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 166
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 167 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 226
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 227 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 282
>gi|289547568|ref|NP_001166111.1| CUGBP Elav-like family member 1 isoform 5 [Homo sapiens]
Length = 485
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
+A NA HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS +G I
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCTENDIRVMFSSFGQI 133
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 EECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQ 193
Query: 190 RR 191
+R
Sbjct: 194 KR 195
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNVEDR-KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 151
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 152 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 196
>gi|32482065|gb|AAP84389.1| FCA protein [Triticum aestivum]
Length = 739
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 123 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 182
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 183 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 242
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ +++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 243 VYVMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 298
>gi|32482090|gb|AAP84398.1| FCA protein [Triticum aestivum]
Length = 719
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 104 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 163
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 164 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 223
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 224 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 279
>gi|198431449|ref|XP_002130974.1| PREDICTED: similar to HrETR-1 [Ciona intestinalis]
Length = 538
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 122/190 (64%)
Query: 5 KKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICP 64
K+ + ++ VKLF+GQVPK+ E +L +F F + E+++++DK T +GC F+
Sbjct: 65 KETPEKDDDAVKLFIGQVPKNWEEKELRQVFAPFGEIFELSVLRDKYTGMHKGCAFLTYT 124
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFS 124
+ A A N+ H +KTLPG + P+QVK AD + + KLF+GML K +E +V LF
Sbjct: 125 QKTSAMNAQNSLHERKTLPGMNHPIQVKPADTVSKGEDRKLFVGMLGKRQNEDDVRILFE 184
Query: 125 IYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
+GTI++ ILR + SKGCAF+K ++A +A+EA++G M G+S LVVK+ADT+
Sbjct: 185 PFGTIEECTILRTPEGQSKGCAFVKLSCHQEAKSAMEALHGSQTMPGASSSLVVKFADTD 244
Query: 185 KERQARRAQK 194
KER RR Q+
Sbjct: 245 KERAVRRMQQ 254
>gi|32482116|gb|AAP84410.1| FCA protein [Triticum aestivum]
Length = 707
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 102 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 161
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 162 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 221
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 222 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 277
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Query: 93 YADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR----GSQQTSKGCAFL 148
Y+D + + KLF+G +P+ +E +V LF +G + ++ ++R G QQ GC F+
Sbjct: 92 YSDHDNKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQ---GCCFV 148
Query: 149 KYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
KY T E+A A+ A++ + + G+ P+ V++AD EKER
Sbjct: 149 KYATSEEAERAIRALHNQCTIPGAMGPVQVRYADGEKER 187
>gi|301772548|ref|XP_002921692.1| PREDICTED: CUGBP Elav-like family member 1-like [Ailuropoda
melanoleuca]
Length = 512
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
+A NA HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS +G I
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCTENDIRVMFSSFGQI 160
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 EECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQ 220
Query: 190 RR 191
+R
Sbjct: 221 KR 222
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNVEDR-KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 178
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 179 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 223
>gi|289547566|ref|NP_001166110.1| CUGBP Elav-like family member 1 isoform 4 [Homo sapiens]
gi|109106411|ref|XP_001106041.1| PREDICTED: CUGBP, Elav-like family member 1 isoform 4 [Macaca
mulatta]
gi|296218064|ref|XP_002755281.1| PREDICTED: CUGBP Elav-like family member 1 [Callithrix jacchus]
gi|332259914|ref|XP_003279029.1| PREDICTED: CUGBP Elav-like family member 1 [Nomascus leucogenys]
gi|397488336|ref|XP_003815223.1| PREDICTED: CUGBP Elav-like family member 1 [Pan paniscus]
gi|402893566|ref|XP_003909963.1| PREDICTED: CUGBP Elav-like family member 1 isoform 1 [Papio anubis]
gi|168275618|dbj|BAG10529.1| CUG triplet repeat RNA-binding protein 1 [synthetic construct]
Length = 512
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
+A NA HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS +G I
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCTENDIRVMFSSFGQI 160
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 EECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQ 220
Query: 190 RR 191
+R
Sbjct: 221 KR 222
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNVEDR-KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 178
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 179 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 223
>gi|338712047|ref|XP_003362650.1| PREDICTED: CUGBP, Elav-like family member 1 isoform 2 [Equus
caballus]
gi|345783916|ref|XP_003432496.1| PREDICTED: CUGBP, Elav-like family member 1 [Canis lupus
familiaris]
gi|410973717|ref|XP_003993294.1| PREDICTED: CUGBP Elav-like family member 1 isoform 1 [Felis catus]
Length = 512
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
+A NA HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS +G I
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCTENDIRVMFSSFGQI 160
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 EECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQ 220
Query: 190 RR 191
+R
Sbjct: 221 KR 222
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNVEDR-KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 178
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 179 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 223
>gi|32482149|gb|AAP84420.1| FCA-D1 [Triticum aestivum]
Length = 659
Score = 163 bits (413), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 39 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVEYATSEEAERAIR 98
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 99 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 158
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 159 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 214
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Query: 93 YADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR----GSQQTSKGCAFL 148
Y+D + + KLF+G +P+ +E +V LF +G + ++ ++R G QQ GC F+
Sbjct: 29 YSDHDNKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQ---GCCFV 85
Query: 149 KYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+Y T E+A A+ A++ + + G+ P+ V++AD EKER
Sbjct: 86 EYATSEEAERAIRALHNQCTIPGAMGPVQVRYADGEKER 124
>gi|440903464|gb|ELR54119.1| CUGBP Elav-like family member 1 [Bos grunniens mutus]
Length = 512
Score = 163 bits (413), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
+A NA HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS +G I
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCTENDIRVMFSSFGQI 160
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 EECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQ 220
Query: 190 RR 191
+R
Sbjct: 221 KR 222
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNVEDR-KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 178
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 179 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 223
>gi|32482100|gb|AAP84402.1| FCA protein [Triticum aestivum]
Length = 736
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F+ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 118 VKLFVGSVPRTANEDDVRPLFENHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 177
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 178 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 237
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 238 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 293
>gi|32482394|gb|AAP84386.1| FCA protein [Triticum aestivum]
Length = 735
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 118 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 177
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L + + E+ +F+ +G ++D
Sbjct: 178 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNRQATAKEIEEIFAPFGHVED 237
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 238 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 293
>gi|62857945|ref|NP_001017152.1| CUGBP Elav-like family member 1 [Xenopus (Silurana) tropicalis]
gi|123910258|sp|Q28HE9.1|CELF1_XENTR RecName: Full=CUGBP Elav-like family member 1; Short=CELF-1;
AltName: Full=Bruno-like protein 2; AltName: Full=CUG
triplet repeat RNA-binding protein 1; Short=CUG-BP1;
AltName: Full=CUG-BP- and ETR-3-like factor 1; AltName:
Full=RNA-binding protein BRUNOL-2
gi|89272922|emb|CAJ82289.1| CUG triplet repeat, RNA binding protein 1 [Xenopus (Silurana)
tropicalis]
Length = 490
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 135/216 (62%), Gaps = 6/216 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E +L +F+++ V E+N+++D++ S+GCCF+ +R+ A
Sbjct: 14 DSIKMFVGQVPRSWSEKELRELFEQYGAVYEINVLRDRSQNPPQSKGCCFITFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLF+GM+ K +E ++ A+FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFVGMVSKKCNENDIRAMFSQFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEESRILRGPDGMSRGCAFVTFTTRSMAQMAIKAMHQAQTMEGCSSPIVVKFADTQKDKE 193
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPY 224
+R + Q NA S +L G + AP Y
Sbjct: 194 QKRMTQQLQQQMQQLNAASMWGNLAGLSSL--APQY 227
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLFVG V K E + AMF +F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFVGMVSKKCNENDIRAMFSQFGQIEESRILRGPDGM-SRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRSMAQMAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQKRM 197
>gi|344281041|ref|XP_003412289.1| PREDICTED: CUGBP Elav-like family member 1-like [Loxodonta
africana]
Length = 512
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
+A NA HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS +G I
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCTENDIRVMFSSFGQI 160
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 EECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQ 220
Query: 190 RR 191
+R
Sbjct: 221 KR 222
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNVEDR-KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 178
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 179 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 223
>gi|68533093|dbj|BAE06101.1| CUGBP1 variant protein [Homo sapiens]
Length = 544
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 73 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 132
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
+A NA HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS +G I
Sbjct: 133 EAQNALHNMKVLPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCTENDIRVMFSSFGQI 192
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 193 EECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQ 252
Query: 190 RR 191
+R
Sbjct: 253 KR 254
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 153 MKPADSEKNNVEDR-KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 210
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 211 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 255
>gi|291232672|ref|XP_002736280.1| PREDICTED: bruno-2-like [Saccoglossus kowalevskii]
Length = 500
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 120/185 (64%), Gaps = 6/185 (3%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ M E L +EF V ++N+++DK T SRGCCFV +R+ A +A
Sbjct: 30 DAIKMFVGQIPRSMDENDLREFLEEFGPVYQLNVLRDKVTGQSRGCCFVTYYTRKAALQA 89
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
NA HN KT+PG +Q+K AD E E KLF+GM+ K +E ++ +F+ +G+I++
Sbjct: 90 QNALHNVKTMPGMHHRIQMKPADSENRNEERKLFVGMISKKCNEGDIRLMFAPFGSIEEC 149
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK---MEGSSVPLVVKWADTEKERQA 189
+LR +Q SKGCAF+ + +K+ +AL AI KH+ MEG S L V++A+T KER
Sbjct: 150 TVLRDAQGVSKGCAFITFSSKQ---SALNAIQNKHQSVTMEGCSSSLQVRFAETVKERDQ 206
Query: 190 RRAQK 194
+R +K
Sbjct: 207 KRMRK 211
>gi|32482061|gb|AAP84388.1| FCA protein [Triticum aestivum]
Length = 737
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 120 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIK 179
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 180 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 239
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 240 VYIMKDGMRQSRGCGFAKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 295
>gi|32482069|gb|AAP84391.1| FCA protein [Triticum aestivum]
Length = 732
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VK FVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 115 VKFFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 174
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 175 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 234
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 235 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 290
>gi|82237708|sp|Q6PF35.1|CEL1B_XENLA RecName: Full=CUGBP Elav-like family member 1-B; Short=CELF-1B;
AltName: Full=Bruno-like protein 2-B; AltName: Full=CUG
triplet repeat RNA-binding protein 1-B; Short=CUG-BP1-B;
AltName: Full=CUG-BP- and ETR-3-like factor 1-B;
AltName: Full=Embryo deadenylation element-binding
protein B; Short=EDEN-BP-B; AltName: Full=RNA-binding
protein BRUNOL-2-B; AltName: Full=p53/p55
gi|34784678|gb|AAH57743.1| Cugbp1-b protein [Xenopus laevis]
Length = 489
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 130/206 (63%), Gaps = 4/206 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E +L +F+++ V E+N+++D++ S+GCCF+ +R+ A
Sbjct: 14 DSIKMFVGQVPRSWSEKELRELFEQYGAVYEINVLRDRSQNPPQSKGCCFITFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ LFS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMVSKKCNENDIRTLFSQFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEESRILRGPDGMSRGCAFITFTTRSMAQMAIKAMHQAQTMEGCSSPIVVKFADTQKDKE 193
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFG 214
+R + Q NA S +L G
Sbjct: 194 QKRMTQQLQQQMQQLNAASMWGNLAG 219
>gi|325189112|emb|CCA23638.1| CUGBP and ETR3like factor putative [Albugo laibachii Nc14]
Length = 550
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 124/190 (65%), Gaps = 6/190 (3%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLF+GQVP+ MTE +LL + + F V ++ II+DK T + RGC F S ++A++AV
Sbjct: 76 MKLFIGQVPRTMTETELLPILEAFGEVVDLTIIRDKLTGSHRGCAFASFASPEDAERAVE 135
Query: 75 ACHNKKTLPGASSPLQVKYADGEL-ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQ 133
HNK TLP + +PLQV+ A+G+ EHKLFIGM+PK +E + +F +G I ++
Sbjct: 136 ELHNKVTLPDSINPLQVRPAEGQAGAAQEHKLFIGMIPKTATEQAIYDIFGEFGPIDEVF 195
Query: 134 ILRGSQQT--SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER--QA 189
ILR Q T SKGCAFLK++ +E A+A++E +NGK M PLVVK+AD+ ++R +
Sbjct: 196 ILR-HQPTGQSKGCAFLKFKERESAVASIEQLNGKITMMNGVSPLVVKFADSRRQRLQRV 254
Query: 190 RRAQKAQSQA 199
R SQA
Sbjct: 255 RSTNSDTSQA 264
>gi|32482383|gb|AAP84381.1| FCA protein [Triticum aestivum]
Length = 737
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 120 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 179
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 180 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIGEIFAPFGHVED 239
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA +++G + M G PL+V++AD ++ R
Sbjct: 240 VYIMKDGMRQSRGCGFVKFSSKEPALAATNSLSGTYIMRGCEQPLIVRFADPKRPR 295
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Query: 93 YADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR----GSQQTSKGCAFL 148
Y+D + + KLF+G +P+ +E +V LF +G + ++ ++R G QQ GC F+
Sbjct: 110 YSDHDNKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQ---GCCFV 166
Query: 149 KYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
KY T E+A A+ A++ + + G+ P+ V++AD EKER
Sbjct: 167 KYATSEEAERAIRALHNQCTIPGAMGPVQVRYADGEKER 205
>gi|334331817|ref|XP_001364287.2| PREDICTED: CUGBP Elav-like family member 1-like [Monodelphis
domestica]
Length = 512
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DSIKMFVGQVPRSWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
+A NA HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS +G I
Sbjct: 101 EAQNALHNMKILPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCNENDIRVMFSSFGQI 160
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 EECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQ 220
Query: 190 RR 191
+R
Sbjct: 221 KR 222
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K E + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNVEDR-KLFIGMISKKCNENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 178
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 179 VTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQKRM 223
>gi|348545314|ref|XP_003460125.1| PREDICTED: CUGBP Elav-like family member 1-like isoform 1
[Oreochromis niloticus]
Length = 509
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 123/182 (67%), Gaps = 3/182 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E QL +F+ + V E+N+++D++ S+GCCFV SR+ A
Sbjct: 41 DAIKMFVGQIPRSWSEEQLRELFEPYGAVYEINVLRDRSQNPPQSKGCCFVTYYSRKSAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
+A NA HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS YG I
Sbjct: 101 EAQNALHNMKILPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCNENDIRLMFSPYGQI 160
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ +ILRG S+GCAF+ + ++ A +A+++++ MEG S P+VVK+ADT+K+++
Sbjct: 161 EECRILRGPDGLSRGCAFVTFTARQMAQSAIKSMHQSQTMEGCSSPIVVKFADTQKDKEQ 220
Query: 190 RR 191
+R
Sbjct: 221 KR 222
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K E + MF + ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNVEDR-KLFIGMISKKCNENDIRLMFSPYGQIEECRILRGPDG-LSRGCAF 178
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +RQ A A+ + H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 179 VTFTARQMAQSAIKSMHQSQTMEGCSSPIVVKFADTQKDKEQKRM 223
>gi|390468527|ref|XP_003733960.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Callithrix
jacchus]
Length = 454
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 126/215 (58%), Gaps = 9/215 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGCIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQDEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER R
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERALR 221
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYN 225
R Q+ Q HP+ LP+G Y
Sbjct: 222 RMQQMAGQLGAF------HPA---PLPLGACSAYT 247
>gi|32482381|gb|AAP84380.1| FCA protein [Triticum aestivum]
Length = 721
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F+ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 104 VKLFVGSVPRTANEDDVRPLFEGHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 163
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 164 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 223
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+++++G + M G PL+V++AD ++ R
Sbjct: 224 VYIMKDGMRQSRGCGFVKFSSKEPALAAMDSLSGTYIMRGCEQPLIVRFADPKRPR 279
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Query: 93 YADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR----GSQQTSKGCAFL 148
Y+D + + KLF+G +P+ +E +V LF +G + ++ ++R G QQ GC F+
Sbjct: 94 YSDHDNKSGYVKLFVGSVPRTANEDDVRPLFEGHGDVLEVALIRDRKTGEQQ---GCCFV 150
Query: 149 KYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
KY T E+A A+ A++ + + G+ P+ V++AD EKER
Sbjct: 151 KYATSEEAERAIRALHNQCTIPGAMGPVQVRYADGEKER 189
>gi|32482388|gb|AAP84383.1| FCA protein [Triticum aestivum]
Length = 710
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F+ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 118 VKLFVGSVPRTANEDDVRPLFEYHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 177
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 178 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 237
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 238 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 293
>gi|32482373|gb|AAP84379.1| FCA protein [Triticum aestivum]
Length = 737
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++ +
Sbjct: 120 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERVIR 179
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 180 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 239
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 240 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 295
>gi|296213628|ref|XP_002753353.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Callithrix
jacchus]
Length = 481
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 126/215 (58%), Gaps = 9/215 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGCIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQDEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER R
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERALR 221
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYN 225
R Q+ Q HP+ LP+G Y
Sbjct: 222 RMQQMAGQLGAF------HPA---PLPLGACSAYT 247
>gi|327259665|ref|XP_003214656.1| PREDICTED: CUGBP Elav-like family member 1-like [Anolis
carolinensis]
Length = 514
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRSWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
+A NA HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS +G I
Sbjct: 101 EAQNALHNMKILPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCNENDIRVMFSSFGQI 160
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 EECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQ 220
Query: 190 RR 191
+R
Sbjct: 221 KR 222
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K E + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNVEDR-KLFIGMISKKCNENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 178
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 179 VTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQKRI 223
>gi|32482104|gb|AAP84404.1| FCA protein [Triticum aestivum]
Length = 738
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 121 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 180
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+Y DGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 181 ALHNQCTIPGAMGPVQVRYTDGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 240
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 241 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 296
>gi|32482102|gb|AAP84403.1| FCA protein [Triticum aestivum]
Length = 730
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++ +
Sbjct: 113 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERVIR 172
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 173 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 232
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 233 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 288
>gi|32482076|gb|AAP84394.1| FCA protein [Triticum aestivum]
Length = 734
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 117 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 176
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 177 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 236
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE LAA+ +++G + M G PL+V++AD ++ R
Sbjct: 237 VYIMKDGMRQSRGCGFVKFSSKEPPLAAMNSLSGTYIMRGCEQPLIVRFADLKRPR 292
>gi|32482110|gb|AAP84407.1| FCA protein [Triticum aestivum]
Length = 736
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 118 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 177
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 178 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 237
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE AL A+ +++G + M G PL+V++AD ++ R
Sbjct: 238 VYIMKDGMRQSRGCGFVKFSSKEPALVAMNSLSGTYIMRGCEQPLIVQFADPKRPR 293
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Query: 93 YADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR----GSQQTSKGCAFL 148
Y+D + + KLF+G +P+ +E +V LF +G + ++ ++R G QQ GC F+
Sbjct: 108 YSDHDNKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQ---GCCFV 164
Query: 149 KYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
KY T E+A A+ A++ + + G+ P+ V++AD EKER
Sbjct: 165 KYATSEEAERAIRALHNQCTIPGAMGPVQVRYADGEKER 203
>gi|222142946|gb|ACI16484.2| flowering time control protein [Hordeum vulgare]
Length = 743
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 124 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 183
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 184 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 243
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++A+ ++ R
Sbjct: 244 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFANPKRPR 299
>gi|32482059|gb|AAP84387.1| FCA protein [Triticum aestivum]
Length = 728
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 111 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 170
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ TLPGA P+QV+YADGE ER +EH LF+ L K + E+ +F+ +G ++D
Sbjct: 171 ALHNQCTLPGAMGPVQVRYADGEKERHGSIEHILFVASLNKQATAKEIEEIFAPFGHVED 230
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 231 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 286
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Query: 93 YADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR----GSQQTSKGCAFL 148
Y+D + + KLF+G +P+ +E +V LF +G + ++ ++R G QQ GC F+
Sbjct: 101 YSDHDNKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQ---GCCFV 157
Query: 149 KYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
KY T E+A A+ A++ + + G+ P+ V++AD EKER
Sbjct: 158 KYATSEEAERAIRALHNQCTLPGAMGPVQVRYADGEKER 196
>gi|148694025|gb|EDL25972.1| bruno-like 6, RNA binding protein (Drosophila), isoform CRA_a [Mus
musculus]
Length = 465
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 126/215 (58%), Gaps = 9/215 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 47 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 106
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 107 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 166
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER R
Sbjct: 167 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMTGASSSLVVKLADTDRERALR 226
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYN 225
R Q+ Q HP+ LP+G Y
Sbjct: 227 RMQQMAGQLGAF------HPA---PLPLGACGAYT 252
>gi|12852385|dbj|BAB29392.1| unnamed protein product [Mus musculus]
gi|148695566|gb|EDL27513.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_b [Mus
musculus]
Length = 487
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+NI++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|38570084|ref|NP_941955.1| CUGBP Elav-like family member 1 isoform 2 [Mus musculus]
gi|349585220|ref|NP_001231820.1| CUGBP Elav-like family member 1 isoform 2 [Mus musculus]
gi|349732093|ref|NP_001231832.1| CUGBP Elav-like family member 1 isoform 2 [Mus musculus]
gi|19857900|sp|P28659.2|CELF1_MOUSE RecName: Full=CUGBP Elav-like family member 1; Short=CELF-1;
AltName: Full=50 kDa nuclear polyadenylated RNA-binding
protein; AltName: Full=Brain protein F41; AltName:
Full=Bruno-like protein 2; AltName: Full=CUG triplet
repeat RNA-binding protein 1; Short=CUG-BP1; AltName:
Full=CUG-BP- and ETR-3-like factor 1; AltName:
Full=Deadenylation factor CUG-BP; AltName:
Full=Deadenylation factor EDEN-BP; AltName: Full=Embryo
deadenylation element-binding protein homolog;
Short=EDEN-BP homolog; AltName: Full=RNA-binding protein
BRUNOL-2
gi|12054715|emb|CAC20707.1| deadenylation factor EDEN-BP [Mus musculus]
Length = 486
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+NI++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|426233875|ref|XP_004010933.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member 6
[Ovis aries]
Length = 451
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/195 (41%), Positives = 121/195 (62%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 14 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 74 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 133
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA+++++G M G+S LVVK ADT++ER R
Sbjct: 134 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQSLHGSRTMAGASSSLVVKLADTDRERALR 193
Query: 191 RAQKAQSQANNLPNA 205
R Q+ Q P A
Sbjct: 194 RMQQMAGQLGAFPPA 208
>gi|402874765|ref|XP_003901198.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Papio anubis]
Length = 454
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 126/215 (58%), Gaps = 9/215 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER R
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERALR 221
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYN 225
R Q+ Q HP+ LP+G Y
Sbjct: 222 RMQQMAGQLGAF------HPA---PLPLGACGAYT 247
>gi|426379623|ref|XP_004056491.1| PREDICTED: CUGBP Elav-like family member 6 isoform 4 [Gorilla
gorilla gorilla]
Length = 463
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 117/184 (63%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER R
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERALR 221
Query: 191 RAQK 194
R Q+
Sbjct: 222 RMQQ 225
>gi|8745539|gb|AAF78957.1|AF267535_1 CUG-binding protein LYLQ isoform [Mus musculus]
Length = 486
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+NI++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|157818811|ref|NP_001100297.1| CUGBP Elav-like family member 6 [Rattus norvegicus]
gi|149041860|gb|EDL95701.1| bruno-like 6, RNA binding protein (Drosophila) (predicted) [Rattus
norvegicus]
Length = 459
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 118/188 (62%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER R
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMTGASSSLVVKLADTDRERALR 221
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 222 RMQQMAGQ 229
>gi|34328409|ref|NP_780444.2| CUGBP Elav-like family member 6 [Mus musculus]
gi|81912009|sp|Q7TN33.1|CELF6_MOUSE RecName: Full=CUGBP Elav-like family member 6; Short=CELF-6;
AltName: Full=Bruno-like protein 6; AltName:
Full=CUG-BP- and ETR-3-like factor 6; AltName:
Full=RNA-binding protein BRUNOL-6
gi|30851561|gb|AAH52406.1| Bruno-like 6, RNA binding protein (Drosophila) [Mus musculus]
Length = 460
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 126/215 (58%), Gaps = 9/215 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER R
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMTGASSSLVVKLADTDRERALR 221
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYN 225
R Q+ Q HP+ LP+G Y
Sbjct: 222 RMQQMAGQLGAF------HPA---PLPLGACGAYT 247
>gi|74140245|dbj|BAE33820.1| unnamed protein product [Mus musculus]
Length = 486
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+NI++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|148694026|gb|EDL25973.1| bruno-like 6, RNA binding protein (Drosophila), isoform CRA_b [Mus
musculus]
Length = 459
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 118/188 (62%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER R
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMTGASSSLVVKLADTDRERALR 221
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 222 RMQQMAGQ 229
>gi|149022602|gb|EDL79496.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_a [Rattus
norvegicus]
Length = 513
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+NI++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 160
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 IEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 224
>gi|402874763|ref|XP_003901197.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Papio anubis]
gi|387542958|gb|AFJ72106.1| CUGBP Elav-like family member 6 isoform 1 [Macaca mulatta]
Length = 481
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 126/215 (58%), Gaps = 9/215 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER R
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERALR 221
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYN 225
R Q+ Q HP+ LP+G Y
Sbjct: 222 RMQQMAGQLGAF------HPA---PLPLGACGAYT 247
>gi|70794748|ref|NP_001020592.1| CUGBP Elav-like family member 1 [Rattus norvegicus]
gi|81918148|sp|Q4QQT3.1|CELF1_RAT RecName: Full=CUGBP Elav-like family member 1; Short=CELF-1;
AltName: Full=Bruno-like protein 2; AltName: Full=CUG
triplet repeat RNA-binding protein 1; Short=CUG-BP1;
AltName: Full=CUG-BP- and ETR-3-like factor 1; AltName:
Full=RNA-binding protein BRUNOL-2
gi|67678292|gb|AAH98012.1| CUG triplet repeat, RNA binding protein 1 [Rattus norvegicus]
Length = 487
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+NI++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|149022603|gb|EDL79497.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_b [Rattus
norvegicus]
Length = 486
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+NI++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|38570086|ref|NP_059064.2| CUGBP Elav-like family member 1 isoform 1 [Mus musculus]
gi|148695567|gb|EDL27514.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_c [Mus
musculus]
Length = 513
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+NI++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 160
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 IEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 224
>gi|354469942|ref|XP_003497371.1| PREDICTED: CUGBP Elav-like family member 1-like [Cricetulus
griseus]
Length = 513
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+NI++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 160
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 IEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 224
>gi|344247846|gb|EGW03950.1| CUG-BP- and ETR-3-like factor 1 [Cricetulus griseus]
Length = 514
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+NI++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 160
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 IEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 224
>gi|32482072|gb|AAP84392.1| FCA protein [Triticum aestivum]
Length = 736
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 116/176 (65%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 119 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 178
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+Y DGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 179 ALHNQCTIPGAMGPVQVRYVDGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 238
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I+R + S+GC +K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 239 VYIMRDGMRQSRGCGLVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 294
>gi|74150748|dbj|BAE25504.1| unnamed protein product [Mus musculus]
Length = 486
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+NI++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|148695568|gb|EDL27515.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_d [Mus
musculus]
gi|148695569|gb|EDL27516.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_d [Mus
musculus]
Length = 499
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+NI++D++ S+GCCFV +R+ A
Sbjct: 27 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAAL 86
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 87 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 146
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 147 IEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 206
Query: 189 ARR 191
+R
Sbjct: 207 QKR 209
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 107 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 165
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 166 VTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 210
>gi|335292432|ref|XP_003356730.1| PREDICTED: CUGBP, Elav-like family member 6 isoform 3 [Sus scrofa]
Length = 453
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 127/215 (59%), Gaps = 9/215 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA+++++G M G+S LVVK ADT++ER R
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQSLHGSRTMAGASSSLVVKLADTDRERALR 221
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYN 225
R Q+ Q HP+ LP+G Y
Sbjct: 222 RMQQMAGQLGAF------HPA---PLPLGACGAYT 247
>gi|302565316|ref|NP_001180884.1| CUGBP Elav-like family member 6 [Macaca mulatta]
Length = 481
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 126/215 (58%), Gaps = 9/215 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER R
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERALR 221
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYN 225
R Q+ Q HP+ LP+G Y
Sbjct: 222 RMQQMAGQLGAF------HPA---PLPLGACGAYT 247
>gi|326920382|ref|XP_003206453.1| PREDICTED: CUGBP Elav-like family member 1-like [Meleagris
gallopavo]
Length = 487
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 121/182 (66%), Gaps = 3/182 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRSWCEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
+A NA HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS +G I
Sbjct: 74 EAQNALHNMKILPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCNENDIRVMFSPFGQI 133
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 EECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQ 193
Query: 190 RR 191
+R
Sbjct: 194 KR 195
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNVEDR-KLFIGMISKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 151
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 152 VTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQKRI 196
>gi|145306680|gb|ABP57104.1| CUG binding protein 1 [Gallus gallus]
Length = 487
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 121/182 (66%), Gaps = 3/182 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRSWCEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
+A NA HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS +G I
Sbjct: 74 EAQNALHNMKILPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCNENDIRVMFSPFGQI 133
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 EECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQ 193
Query: 190 RR 191
+R
Sbjct: 194 KR 195
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNVEDR-KLFIGMISKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 151
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 152 VTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQKRI 196
>gi|311260847|ref|XP_003128555.1| PREDICTED: CUGBP, Elav-like family member 6 isoform 1 [Sus scrofa]
Length = 480
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 127/215 (59%), Gaps = 9/215 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA+++++G M G+S LVVK ADT++ER R
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQSLHGSRTMAGASSSLVVKLADTDRERALR 221
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYN 225
R Q+ Q HP+ LP+G Y
Sbjct: 222 RMQQMAGQLGAF------HPA---PLPLGACGAYT 247
>gi|329663834|ref|NP_001192573.1| CUGBP Elav-like family member 6 [Bos taurus]
gi|296483717|tpg|DAA25832.1| TPA: trinucleotide repeat containing 4 (predicted)-like [Bos
taurus]
Length = 480
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 127/215 (59%), Gaps = 9/215 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA+++++G M G+S LVVK ADT++ER R
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQSLHGSRTMAGASSSLVVKLADTDRERALR 221
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYN 225
R Q+ Q HP+ LP+G Y
Sbjct: 222 RMQQMAGQLGAF------HPA---PLPLGACGAYT 247
>gi|32482067|gb|AAP84390.1| FCA protein [Triticum aestivum]
Length = 735
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 118 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 177
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +E+KLF+ L K + E+ +F+ +G ++D
Sbjct: 178 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEYKLFVASLNKQATAKEIEEIFAPFGHVED 237
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 238 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 293
>gi|32482112|gb|AAP84408.1| FCA protein [Triticum aestivum]
Length = 741
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 123 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 182
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 183 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 242
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G P +V++AD ++ R
Sbjct: 243 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPSIVRFADPKRPR 298
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Query: 93 YADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR----GSQQTSKGCAFL 148
Y+D + + KLF+G +P+ +E +V LF +G + ++ ++R G QQ GC F+
Sbjct: 113 YSDHDNKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQ---GCCFV 169
Query: 149 KYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
KY T E+A A+ A++ + + G+ P+ V++AD EKER
Sbjct: 170 KYATSEEAERAIRALHNQCTIPGAMGPVQVRYADGEKER 208
>gi|431893701|gb|ELK03522.1| CUG-BP- and ETR-3-like factor 6 [Pteropus alecto]
Length = 505
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 119/188 (63%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 14 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 74 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 133
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA+++++G M G+S LVVK ADT++ER R
Sbjct: 134 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQSLHGSRTMAGASSSLVVKLADTDRERALR 193
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 194 RMQQMAGQ 201
>gi|32482096|gb|AAP84401.1| FCA protein [Triticum aestivum]
Length = 735
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 118 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 177
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER + HKLF+ L K + E+ +F+ +G ++D
Sbjct: 178 ALHNQCTIPGAMGPVQVRYADGEKERHGSIGHKLFVASLNKQATAKEIEEIFAPFGHVED 237
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 238 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 293
>gi|395822451|ref|XP_003784531.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Otolemur
garnettii]
Length = 454
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 126/215 (58%), Gaps = 9/215 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER R
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERALR 221
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYN 225
R Q+ Q HP+ LP+G Y
Sbjct: 222 RMQQMAGQLGAF------HPA---PLPLGACGAYT 247
>gi|395822449|ref|XP_003784530.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Otolemur
garnettii]
Length = 481
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 126/215 (58%), Gaps = 9/215 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER R
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERALR 221
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYN 225
R Q+ Q HP+ LP+G Y
Sbjct: 222 RMQQMAGQLGAF------HPA---PLPLGACGAYT 247
>gi|426379619|ref|XP_004056489.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Gorilla
gorilla gorilla]
Length = 454
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 117/184 (63%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER R
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERALR 221
Query: 191 RAQK 194
R Q+
Sbjct: 222 RMQQ 225
>gi|397495532|ref|XP_003818606.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Pan paniscus]
Length = 454
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 117/184 (63%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER R
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERALR 221
Query: 191 RAQK 194
R Q+
Sbjct: 222 RMQQ 225
>gi|194217895|ref|XP_001492139.2| PREDICTED: CUGBP, Elav-like family member 1 isoform 1 [Equus
caballus]
gi|345783918|ref|XP_533186.3| PREDICTED: CUGBP, Elav-like family member 1 isoform 1 [Canis lupus
familiaris]
gi|410973721|ref|XP_003993296.1| PREDICTED: CUGBP Elav-like family member 1 isoform 3 [Felis catus]
Length = 482
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|332236064|ref|XP_003267225.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Nomascus
leucogenys]
Length = 454
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 117/184 (63%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER R
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERALR 221
Query: 191 RAQK 194
R Q+
Sbjct: 222 RMQQ 225
>gi|332236062|ref|XP_003267224.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Nomascus
leucogenys]
Length = 481
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 117/184 (63%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER R
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERALR 221
Query: 191 RAQK 194
R Q+
Sbjct: 222 RMQQ 225
>gi|426379617|ref|XP_004056488.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Gorilla
gorilla gorilla]
Length = 481
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 117/184 (63%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER R
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERALR 221
Query: 191 RAQK 194
R Q+
Sbjct: 222 RMQQ 225
>gi|71164871|ref|NP_001020767.1| CUGBP Elav-like family member 1 isoform 3 [Homo sapiens]
gi|17374605|sp|Q92879.2|CELF1_HUMAN RecName: Full=CUGBP Elav-like family member 1; Short=CELF-1;
AltName: Full=50 kDa nuclear polyadenylated RNA-binding
protein; AltName: Full=Bruno-like protein 2; AltName:
Full=CUG triplet repeat RNA-binding protein 1;
Short=CUG-BP1; AltName: Full=CUG-BP- and ETR-3-like
factor 1; AltName: Full=Deadenylation factor CUG-BP;
AltName: Full=Embryo deadenylation element-binding
protein homolog; Short=EDEN-BP homolog; AltName:
Full=RNA-binding protein BRUNOL-2
gi|8745535|gb|AAF78955.1|AF267533_1 CUG-binding protein LYLQ isoform [Homo sapiens]
gi|9246973|gb|AAF86230.1|AF248648_1 RNA-binding protein BRUNOL2 [Homo sapiens]
gi|12053580|emb|CAC20566.1| deadenylation factor CUG-BP [Homo sapiens]
gi|119588315|gb|EAW67909.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_d [Homo
sapiens]
gi|119588318|gb|EAW67912.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_d [Homo
sapiens]
gi|387539216|gb|AFJ70235.1| CUGBP Elav-like family member 1 isoform 3 [Macaca mulatta]
Length = 486
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|119588312|gb|EAW67906.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_a [Homo
sapiens]
Length = 487
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|338712050|ref|XP_003362651.1| PREDICTED: CUGBP, Elav-like family member 1 isoform 3 [Equus
caballus]
gi|410973719|ref|XP_003993295.1| PREDICTED: CUGBP Elav-like family member 1 isoform 2 [Felis catus]
Length = 486
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|18858491|ref|NP_571688.1| CUGBP Elav-like family member 1 [Danio rerio]
gi|82247731|sp|Q9IBD0.1|CELF1_DANRE RecName: Full=CUGBP Elav-like family member 1; Short=CELF-1;
AltName: Full=Bruno-like protein 2; AltName: Full=CUG
triplet repeat RNA-binding protein 1; Short=CUG-BP1;
AltName: Full=CUG-BP- and ETR-3-like factor 1; AltName:
Full=EDEN-BP/Bruno-like protein; AltName:
Full=RNA-binding protein BRUNOL-2
gi|7670538|dbj|BAA95119.1| brul [Danio rerio]
Length = 501
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 132/211 (62%), Gaps = 4/211 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E QL +F+ + V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DSIKMFVGQIPRTWSEDQLRELFEPYGAVYEINVLRDRSQNPPQSKGCCFVTYYTRKSAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLF+GM+ K +E ++ +FS YG
Sbjct: 74 EAQNALHNMKILPGMHHPIQMKPADSEKNNAVEDRKLFVGMISKKCNENDIRLMFSPYGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + ++ A +A+++++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTARQMAQSAIKSMHQSQTMEGCSSPIVVKFADTQKDKE 193
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALPMG 219
+R + Q NA S +L G +G
Sbjct: 194 QKRIAQQLQQQMQQLNAASMWGNLTGLNSLG 224
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLFVG + K E + MF + ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFVGMISKKCNENDIRLMFSPYGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +RQ A A+ + H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTARQMAQSAIKSMHQSQTMEGCSSPIVVKFADTQKDKEQKRI 197
>gi|397495530|ref|XP_003818605.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Pan paniscus]
Length = 481
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 117/184 (63%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER R
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERALR 221
Query: 191 RAQK 194
R Q+
Sbjct: 222 RMQQ 225
>gi|301768673|ref|XP_002919757.1| PREDICTED: CUGBP Elav-like family member 6-like, partial
[Ailuropoda melanoleuca]
Length = 473
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 127/215 (59%), Gaps = 9/215 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 34 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 93
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 94 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 153
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA+++++G M G+S LVVK ADT++ER R
Sbjct: 154 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQSLHGSRTMAGASSSLVVKLADTDRERALR 213
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYN 225
R Q+ Q HP+ LP+G Y
Sbjct: 214 RMQQMAGQLGAF------HPA---PLPLGACGAYT 239
>gi|281340436|gb|EFB16020.1| hypothetical protein PANDA_008409 [Ailuropoda melanoleuca]
Length = 470
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 127/215 (59%), Gaps = 9/215 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 31 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 90
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 91 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 150
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA+++++G M G+S LVVK ADT++ER R
Sbjct: 151 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQSLHGSRTMAGASSSLVVKLADTDRERALR 210
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYN 225
R Q+ Q HP+ LP+G Y
Sbjct: 211 RMQQMAGQLGAF------HPA---PLPLGACGAYT 236
>gi|343961815|dbj|BAK62495.1| CUG triplet repeat RNA-binding protein 1 [Pan troglodytes]
Length = 483
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|38570081|ref|NP_941989.1| CUGBP Elav-like family member 1 isoform 2 [Homo sapiens]
gi|332259916|ref|XP_003279030.1| PREDICTED: CUGBP Elav-like family member 1 [Nomascus leucogenys]
gi|402893568|ref|XP_003909964.1| PREDICTED: CUGBP Elav-like family member 1 isoform 2 [Papio anubis]
gi|8745537|gb|AAF78956.1|AF267534_1 CUG-binding protein A isoform [Homo sapiens]
gi|21411010|gb|AAH31079.1| CUG triplet repeat, RNA binding protein 1 [Homo sapiens]
gi|119588317|gb|EAW67911.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_f [Homo
sapiens]
gi|123994083|gb|ABM84643.1| CUG triplet repeat, RNA binding protein 1 [synthetic construct]
Length = 483
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|5729794|ref|NP_006551.1| CUGBP Elav-like family member 1 isoform 1 [Homo sapiens]
gi|402893570|ref|XP_003909965.1| PREDICTED: CUGBP Elav-like family member 1 isoform 3 [Papio anubis]
gi|1518802|gb|AAC50895.1| CUG-BP/hNab50 [Homo sapiens]
gi|119588313|gb|EAW67907.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_b [Homo
sapiens]
gi|380783235|gb|AFE63493.1| CUGBP Elav-like family member 1 isoform 1 [Macaca mulatta]
gi|410222890|gb|JAA08664.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
Length = 482
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|410931355|ref|XP_003979061.1| PREDICTED: CUGBP Elav-like family member 1-like [Takifugu rubripes]
Length = 378
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 75/182 (41%), Positives = 124/182 (68%), Gaps = 3/182 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E QL +F+ + +V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQIPRSWSEEQLRELFEPYGVVYEINVLRDRSQNPPQSKGCCFVTYYTRKSAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
+A NA HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS YG I
Sbjct: 101 EAQNALHNMKILPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCNENDIRLMFSPYGQI 160
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ +ILRG S+GCAF+ + ++ A +A+++++ MEG S P+VVK+ADT+K+++
Sbjct: 161 EECRILRGPDGLSRGCAFVTFTARQMAQSAIKSMHQSQTMEGCSSPIVVKFADTQKDKEQ 220
Query: 190 RR 191
+R
Sbjct: 221 KR 222
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K E + MF + ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNVEDR-KLFIGMISKKCNENDIRLMFSPYGQIEECRILRGPDG-LSRGCAF 178
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +RQ A A+ + H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 179 VTFTARQMAQSAIKSMHQSQTMEGCSSPIVVKFADTQKDKEQKRM 223
>gi|348545316|ref|XP_003460126.1| PREDICTED: CUGBP Elav-like family member 1-like isoform 2
[Oreochromis niloticus]
Length = 485
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 122/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E QL +F+ + V E+N+++D++ S+GCCFV SR+ A
Sbjct: 14 DAIKMFVGQIPRSWSEEQLRELFEPYGAVYEINVLRDRSQNPPQSKGCCFVTYYSRKSAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS YG
Sbjct: 74 EAQNALHNMKILPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCNENDIRLMFSPYGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + ++ A +A+++++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTARQMAQSAIKSMHQSQTMEGCSSPIVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K E + MF + ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCNENDIRLMFSPYGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +RQ A A+ + H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTARQMAQSAIKSMHQSQTMEGCSSPIVVKFADTQKDKEQKRM 197
>gi|281340493|gb|EFB16077.1| hypothetical protein PANDA_010600 [Ailuropoda melanoleuca]
Length = 486
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|155372145|ref|NP_001094682.1| CUGBP Elav-like family member 1 [Bos taurus]
gi|154425935|gb|AAI51434.1| CUGBP1 protein [Bos taurus]
gi|296479665|tpg|DAA21780.1| TPA: CUG triplet repeat, RNA-binding protein 1 [Bos taurus]
Length = 486
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|395815679|ref|XP_003781352.1| PREDICTED: CUGBP Elav-like family member 1 [Otolemur garnettii]
Length = 482
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|291384970|ref|XP_002709144.1| PREDICTED: CUG triplet repeat, RNA-binding protein 1-like
[Oryctolagus cuniculus]
Length = 483
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|426245410|ref|XP_004016504.1| PREDICTED: CUGBP Elav-like family member 1 [Ovis aries]
Length = 486
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|383415257|gb|AFH30842.1| CUGBP Elav-like family member 1 isoform 4 [Macaca mulatta]
gi|384939406|gb|AFI33308.1| CUGBP Elav-like family member 1 isoform 4 [Macaca mulatta]
gi|384944856|gb|AFI36033.1| CUGBP Elav-like family member 1 isoform 4 [Macaca mulatta]
gi|410222888|gb|JAA08663.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
gi|410259328|gb|JAA17630.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
gi|410259330|gb|JAA17631.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
gi|410298512|gb|JAA27856.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
gi|410298514|gb|JAA27857.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
gi|410357300|gb|JAA44561.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
gi|410357302|gb|JAA44562.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
gi|410357304|gb|JAA44563.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
Length = 513
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 160
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 224
>gi|119588314|gb|EAW67908.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_c [Homo
sapiens]
gi|355566554|gb|EHH22933.1| hypothetical protein EGK_06290 [Macaca mulatta]
gi|355752163|gb|EHH56283.1| hypothetical protein EGM_05659 [Macaca fascicularis]
Length = 514
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 160
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 224
>gi|71980775|ref|NP_492958.3| Protein UNC-75 [Caenorhabditis elegans]
gi|33469616|gb|AAQ19851.1| putative RNA-binding protein [Caenorhabditis elegans]
gi|38422759|emb|CAB03896.4| Protein UNC-75 [Caenorhabditis elegans]
Length = 514
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 88/215 (40%), Positives = 129/215 (60%), Gaps = 13/215 (6%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E I+KDK T +GC F+ R A +
Sbjct: 27 DAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRC 86
Query: 73 VNACHNKKTLPGASSPLQVKYADGE------LERLEHK-LFIGMLPKNVSEAEVSALFSI 125
H++KTLPG + +QVK AD + ++++ K LFIGML K SE EV ALF+
Sbjct: 87 QATLHDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFAT 146
Query: 126 YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
+G + ++ +LRG+ SKGCAF+KY+ A A+ A++G M G+S LVVK+ADTEK
Sbjct: 147 FGELDEVTVLRGADGASKGCAFVKYKHGLDAHMAISALHGSQTMPGASSSLVVKYADTEK 206
Query: 186 ERQARRAQKAQSQANNLPNADSQHPSLFGALPMGY 220
ERQ RR Q+ +Q L +P L + M Y
Sbjct: 207 ERQNRRMQQMAAQMGML------NPMLVNQVGMQY 235
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
K + KLF+G + K +E ++ A+F F +DEV +++ AS+GC FV +
Sbjct: 118 KDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRG-ADGASKGCAFVKYKHGLD 176
Query: 69 ADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A A++A H +T+PGASS L VKYAD E ER ++
Sbjct: 177 AHMAISALHGSQTMPGASSSLVVKYADTEKERQNRRM 213
>gi|348558646|ref|XP_003465128.1| PREDICTED: CUGBP Elav-like family member 1-like [Cavia porcellus]
Length = 513
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 160
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 224
>gi|431915767|gb|ELK16100.1| CUG-BP- and ETR-3-like factor 1 [Pteropus alecto]
Length = 513
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 160
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 224
>gi|441646598|ref|XP_004090758.1| PREDICTED: CUGBP Elav-like family member 1 [Nomascus leucogenys]
gi|383415255|gb|AFH30841.1| CUGBP Elav-like family member 1 isoform 4 [Macaca mulatta]
gi|384939404|gb|AFI33307.1| CUGBP Elav-like family member 1 isoform 4 [Macaca mulatta]
gi|387540328|gb|AFJ70791.1| CUGBP Elav-like family member 1 isoform 4 [Macaca mulatta]
gi|410259332|gb|JAA17632.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
gi|410298516|gb|JAA27858.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
gi|410357404|gb|JAA44564.1| CUGBP, Elav-like family member 1 [Pan troglodytes]
Length = 509
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 160
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 224
>gi|432090407|gb|ELK23833.1| CUGBP Elav-like family member 1 [Myotis davidii]
Length = 513
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKSNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 160
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKSNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 224
>gi|395815677|ref|XP_003781351.1| PREDICTED: CUGBP Elav-like family member 1 [Otolemur garnettii]
Length = 510
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 160
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 224
>gi|338717391|ref|XP_003363632.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member
6-like [Equus caballus]
Length = 540
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 118/188 (62%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 146 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 205
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 206 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 265
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA+++++G M G+S LV+K ADT++ER R
Sbjct: 266 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQSLHGSRTMAGASSSLVIKLADTDRERALR 325
Query: 191 RAQKAQSQ 198
R Q Q
Sbjct: 326 RMQXMSGQ 333
>gi|148706789|gb|EDL38736.1| trinucleotide repeat containing 4, isoform CRA_b [Mus musculus]
Length = 467
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 116/178 (65%), Gaps = 1/178 (0%)
Query: 21 QVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKK 80
Q+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA +A H +K
Sbjct: 15 QIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQK 74
Query: 81 TLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ 140
TLPG + P+QVK AD E R + KLF+GML K ++ +V +F +GTI + +LRG
Sbjct: 75 TLPGMNRPIQVKPADSE-SRGDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDG 133
Query: 141 TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 134 TSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVATQ 191
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 5/87 (5%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICPSRQEADKAV 73
KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV + EA A+
Sbjct: 97 KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQTHAEAQAAI 153
Query: 74 NACHNKKTLPGASSPLQVKYADGELER 100
N H+ +TLPGASS L VK+AD E ER
Sbjct: 154 NTLHSSRTLPGASSSLVVKFADTEKER 180
>gi|32482085|gb|AAP84397.1| FCA protein [Triticum aestivum]
Length = 740
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 116/176 (65%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
KLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 123 AKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYTTSEEAERAIR 182
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 183 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 242
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V +AD ++ R
Sbjct: 243 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVLFADPKRPR 298
>gi|410930632|ref|XP_003978702.1| PREDICTED: CUGBP Elav-like family member 1-like [Takifugu rubripes]
Length = 376
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 123/183 (67%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E QL +F+ + +V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEEQLRELFEPYGVVYEINVLRDRSQNPPQSKGCCFVTYYTRKSAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS YG
Sbjct: 74 EAQNALHNMKILPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCNENDIRLMFSPYGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + ++ A +A+++++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTARQMAQSAIKSMHQSQTMEGCSSPIVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 70/135 (51%), Gaps = 5/135 (3%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K E + MF + ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCNENDIRLMFSPYGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
V +RQ A A+ + H +T+ G SSP+ VK+AD + ++ + + M+ + + +
Sbjct: 153 VTFTARQMAQSAIKSMHQSQTMEGCSSPIVVKFADTQKDKEQKR----MVQQLQQQMQQL 208
Query: 121 ALFSIYGTIKDLQIL 135
+ SI+G + L L
Sbjct: 209 SAASIWGNLTGLNSL 223
>gi|70780381|ref|NP_443072.3| CUGBP Elav-like family member 6 isoform 1 [Homo sapiens]
gi|74760888|sp|Q96J87.1|CELF6_HUMAN RecName: Full=CUGBP Elav-like family member 6; Short=CELF-6;
AltName: Full=Bruno-like protein 6; AltName:
Full=CUG-BP- and ETR-3-like factor 6; AltName:
Full=RNA-binding protein BRUNOL-6
gi|15341327|gb|AAK95615.1|AF401233_1 BRUNO-like 6 RNA-binding protein [Homo sapiens]
gi|17046404|gb|AAL34513.1|AF425606_1 RNA-binding protein CELF6 [Homo sapiens]
gi|119598307|gb|EAW77901.1| bruno-like 6, RNA binding protein (Drosophila), isoform CRA_b [Homo
sapiens]
Length = 481
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 116/184 (63%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA+ ++G M G+S LVVK ADT++ER R
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIRGLHGSRTMAGASSSLVVKLADTDRERALR 221
Query: 191 RAQK 194
R Q+
Sbjct: 222 RMQQ 225
>gi|149632715|ref|XP_001509363.1| PREDICTED: CUGBP Elav-like family member 1 [Ornithorhynchus
anatinus]
Length = 513
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRSWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCNENDIRVMFSSFGQ 160
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 IEECRILRGPDGLSRGCAFVTFTTRSMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K E + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNAVEDRKLFIGMISKKCNENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRSMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQKRM 224
>gi|308465068|ref|XP_003094796.1| CRE-UNC-75 protein [Caenorhabditis remanei]
gi|308246879|gb|EFO90831.1| CRE-UNC-75 protein [Caenorhabditis remanei]
Length = 491
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 121/197 (61%), Gaps = 7/197 (3%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E I+KDK T +GC F+ R A +
Sbjct: 27 DAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTFCHRDSAQRC 86
Query: 73 VNACHNKKTLPGASSPLQVKYADGEL-------ERLEHKLFIGMLPKNVSEAEVSALFSI 125
H++KTLPG + +QVK AD + + + KLFIGML K SE +V LF+
Sbjct: 87 QTTLHDQKTLPGMNRAMQVKPADTDSRPASPKDKADDKKLFIGMLSKQQSEDDVRTLFAA 146
Query: 126 YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
+G + ++ +LRG+ SKGCAF+KY++ A A+ A++G M G+S LVVK+ADTEK
Sbjct: 147 FGELDEVTVLRGADGASKGCAFVKYKSGFDAHMAISALHGSQTMPGASSSLVVKYADTEK 206
Query: 186 ERQARRAQKAQSQANNL 202
ERQ RR Q+ +Q L
Sbjct: 207 ERQNRRMQQMAAQMGML 223
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
K + KLF+G + K +E + +F F +DEV +++ AS+GC FV S +
Sbjct: 118 KDKADDKKLFIGMLSKQQSEDDVRTLFAAFGELDEVTVLRG-ADGASKGCAFVKYKSGFD 176
Query: 69 ADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A A++A H +T+PGASS L VKYAD E ER ++
Sbjct: 177 AHMAISALHGSQTMPGASSSLVVKYADTEKERQNRRM 213
>gi|21410087|gb|AAH30835.1| Bruno-like 6, RNA binding protein (Drosophila) [Homo sapiens]
Length = 481
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 116/184 (63%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA+ ++G M G+S LVVK ADT++ER R
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIRGLHGSRTMAGASSSLVVKLADTDRERALR 221
Query: 191 RAQK 194
R Q+
Sbjct: 222 RMQQ 225
>gi|148706792|gb|EDL38739.1| trinucleotide repeat containing 4, isoform CRA_e [Mus musculus]
Length = 447
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 116/178 (65%), Gaps = 1/178 (0%)
Query: 21 QVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKK 80
Q+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA +A H +K
Sbjct: 14 QIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQK 73
Query: 81 TLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ 140
TLPG + P+QVK AD E R + KLF+GML K ++ +V +F +GTI + +LRG
Sbjct: 74 TLPGMNRPIQVKPADSE-SRGDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDG 132
Query: 141 TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 133 TSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVATQ 190
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 5/87 (5%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICPSRQEADKAV 73
KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV + EA A+
Sbjct: 96 KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQTHAEAQAAI 152
Query: 74 NACHNKKTLPGASSPLQVKYADGELER 100
N H+ +TLPGASS L VK+AD E ER
Sbjct: 153 NTLHSSRTLPGASSSLVVKFADTEKER 179
>gi|281211191|gb|EFA85357.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 515
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 114/171 (66%), Gaps = 2/171 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEF-ALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
+KLFVGQ+PK E L +MF ++ + E+++I++K T +GC FV S+ +A+KA+
Sbjct: 3 IKLFVGQIPKSFNEDNLKSMFADYEGSIQEISVIRNKQTNEPQGCAFVTLSSKDDAEKAI 62
Query: 74 NACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQ 133
H+ K PG S+ LQVKYAD E E+ KLF+GMLP+ E ++ LF+ YG ++D+
Sbjct: 63 QTLHSSKKFPGVSNSLQVKYADSEQEKQSTKLFVGMLPRTYQEDDIKTLFADYGEVEDIC 122
Query: 134 ILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
+LRG+ SKGC F++++ +E L+A+ A+NG + + S LVVK+ADTE
Sbjct: 123 LLRGNNNESKGCGFIRFQNRESCLSAISALNGIN-LPPSPNNLVVKFADTE 172
>gi|324507732|gb|ADY43273.1| CUGBP Elav family member 1-A [Ascaris suum]
gi|324510717|gb|ADY44479.1| CUGBP Elav family member 1-A, partial [Ascaris suum]
Length = 594
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 119/179 (66%), Gaps = 1/179 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ E + +F++F V ++N+++DKTT+ASRGCCFV R +A A
Sbjct: 35 DTIKMFVGQIPRSWGEQECRELFEQFGSVYQLNVLRDKTTQASRGCCFVTFYRRADAIAA 94
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A HN + LP P+Q+K AD E R E KLF+GML K ++E +V A+F+ +G I+D
Sbjct: 95 QAALHNIRVLPQMHHPVQMKPADSE-NRNERKLFVGMLNKRLTEEDVKAMFAHFGHIEDC 153
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+L+ S S+GCAF+ + + A A+ ++ MEG S P+VVK+ADT+KE++A++
Sbjct: 154 TVLKDSDGKSRGCAFVTFANRSYAQQAIRLMHHSQTMEGCSTPIVVKFADTQKEKEAKK 212
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 62/102 (60%), Gaps = 3/102 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG + K +TE + AMF F +++ ++KD + SRGC FV +R
Sbjct: 117 DSENRNER-KLFVGMLNKRLTEEDVKAMFAHFGHIEDCTVLKDSDGK-SRGCAFVTFANR 174
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIG 108
A +A+ H+ +T+ G S+P+ VK+AD + E+ E K +G
Sbjct: 175 SYAQQAIRLMHHSQTMEGCSTPIVVKFADTQKEK-EAKKTVG 215
>gi|289547741|ref|NP_001166155.1| CUGBP Elav-like family member 6 isoform 2 [Homo sapiens]
gi|194381648|dbj|BAG58778.1| unnamed protein product [Homo sapiens]
Length = 454
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 116/184 (63%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA+ ++G M G+S LVVK ADT++ER R
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIRGLHGSRTMAGASSSLVVKLADTDRERALR 221
Query: 191 RAQK 194
R Q+
Sbjct: 222 RMQQ 225
>gi|354473520|ref|XP_003498983.1| PREDICTED: CUGBP Elav-like family member 6-like [Cricetulus
griseus]
Length = 551
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 126/215 (58%), Gaps = 9/215 (4%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 112 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 171
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 172 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 231
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER R
Sbjct: 232 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMSGASSSLVVKLADTDRERALR 291
Query: 191 RAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYN 225
R Q+ Q HP+ LP+G Y
Sbjct: 292 RMQQMAGQLGAF------HPT---PLPLGACGAYT 317
>gi|194385764|dbj|BAG65257.1| unnamed protein product [Homo sapiens]
Length = 468
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 119/178 (66%), Gaps = 3/178 (1%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEADKAVN 74
+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A +A N
Sbjct: 1 MFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQN 60
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTIKDLQ 133
A HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS +G I++ +
Sbjct: 61 ALHNMKVLPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECR 120
Query: 134 ILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++ +R
Sbjct: 121 ILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKR 178
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 77 MKPADSEKNNVEDR-KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 134
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 135 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 179
>gi|417411512|gb|JAA52190.1| Putative rna-binding protein etr-3 rrm superfamily, partial
[Desmodus rotundus]
Length = 541
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 69 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 128
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 129 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 188
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 189 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 248
Query: 189 ARR 191
+R
Sbjct: 249 QKR 251
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 149 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 207
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 208 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 252
>gi|268561214|ref|XP_002646391.1| C. briggsae CBR-UNC-75 protein [Caenorhabditis briggsae]
Length = 550
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 123/197 (62%), Gaps = 7/197 (3%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E I+KDK T +GC F+ R A +
Sbjct: 27 DAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTFCHRDSAQRC 86
Query: 73 VNACHNKKTLPGASSPLQVKYADGE------LERLEHK-LFIGMLPKNVSEAEVSALFSI 125
H++KTLPG + +QVK AD + ++++ K LFIGML K SE +V LF+
Sbjct: 87 QTTLHDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDDVRTLFAA 146
Query: 126 YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
+G + ++ +LRG+ SKGCAF+KY++ A A+ A++G M G+S LVVK+ADTEK
Sbjct: 147 FGELDEVTVLRGADGASKGCAFVKYKSGFDAHMAISALHGSQTMPGASSSLVVKYADTEK 206
Query: 186 ERQARRAQKAQSQANNL 202
ERQ RR Q+ +Q L
Sbjct: 207 ERQNRRMQQMAAQMGML 223
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
K + KLF+G + K +E + +F F +DEV +++ AS+GC FV S +
Sbjct: 118 KDKMDDKKLFIGMLSKQQSEDDVRTLFAAFGELDEVTVLRG-ADGASKGCAFVKYKSGFD 176
Query: 69 ADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A A++A H +T+PGASS L VKYAD E ER ++
Sbjct: 177 AHMAISALHGSQTMPGASSSLVVKYADTEKERQNRRM 213
>gi|32482130|gb|AAP84415.1| FCA protein, partial [Triticum aestivum]
Length = 743
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 126 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 185
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 186 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIGEIFAPFGHVED 245
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+G F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 246 VYIMKDGMRQSRGSGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 301
>gi|32482118|gb|AAP84411.1| FCA protein, partial [Triticum aestivum]
Length = 736
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+ + T +GCCFV + +EA++A+
Sbjct: 120 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRGRKTGEQQGCCFVKYATSEEAERAIR 179
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 180 AQHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 239
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 240 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGAYIMRGCEQPLIVRFADPKRPR 295
>gi|355677605|gb|AER96037.1| CUG triplet repeat, RNA binding protein 1 [Mustela putorius furo]
Length = 540
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 69 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 128
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 129 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 188
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 189 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 248
Query: 189 ARR 191
+R
Sbjct: 249 QKR 251
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 149 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 207
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 208 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 252
>gi|395543757|ref|XP_003773780.1| PREDICTED: CUGBP Elav-like family member 1 [Sarcophilus harrisii]
Length = 513
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRSWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKILPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCNENDIRVMFSSFGQ 160
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K E + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNAVEDRKLFIGMISKKCNENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQKRM 224
>gi|324508266|gb|ADY43493.1| CUGBP Elav family member 1-A [Ascaris suum]
Length = 539
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 119/179 (66%), Gaps = 1/179 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ E + +F++F V ++N+++DKTT+ASRGCCFV R +A A
Sbjct: 35 DTIKMFVGQIPRSWGEQECRELFEQFGSVYQLNVLRDKTTQASRGCCFVTFYRRADAIAA 94
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A HN + LP P+Q+K AD E R E KLF+GML K ++E +V A+F+ +G I+D
Sbjct: 95 QAALHNIRVLPQMHHPVQMKPADSE-NRNERKLFVGMLNKRLTEEDVKAMFAHFGHIEDC 153
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+L+ S S+GCAF+ + + A A+ ++ MEG S P+VVK+ADT+KE++A++
Sbjct: 154 TVLKDSDGKSRGCAFVTFANRSYAQQAIRLMHHSQTMEGCSTPIVVKFADTQKEKEAKK 212
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 62/102 (60%), Gaps = 3/102 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLFVG + K +TE + AMF F +++ ++KD + SRGC FV +R
Sbjct: 117 DSENRNER-KLFVGMLNKRLTEEDVKAMFAHFGHIEDCTVLKDSDGK-SRGCAFVTFANR 174
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIG 108
A +A+ H+ +T+ G S+P+ VK+AD + E+ E K +G
Sbjct: 175 SYAQQAIRLMHHSQTMEGCSTPIVVKFADTQKEK-EAKKTVG 215
>gi|387015318|gb|AFJ49778.1| CUGBP Elav-like family member 1-like [Crotalus adamanteus]
Length = 511
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRSWSEKDLRDLFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKILPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCNENDIRVMFSSFGQ 160
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K E + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKNNAVEDRKLFIGMISKKCNENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQKRI 224
>gi|348576693|ref|XP_003474121.1| PREDICTED: CUGBP Elav-like family member 4-like [Cavia porcellus]
Length = 477
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 114/189 (60%), Gaps = 1/189 (0%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ C +
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLYCTRHSASV 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTI 129
H +LPG + P+QVK AD E + KLF+GML K SE +V LF +G I
Sbjct: 110 TTQVLLHGAPSLPGMNRPIQVKPADSESRGGKDRKLFVGMLNKQQSEDDVRRLFEAFGNI 169
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER
Sbjct: 170 EECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTM 229
Query: 190 RRAQKAQSQ 198
RR Q+ Q
Sbjct: 230 RRMQQMAGQ 238
>gi|281203518|gb|EFA77718.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 341
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 149/271 (54%), Gaps = 16/271 (5%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
K+FVG +P E +L +F++F + ++IIKDK T +GC F+ +++EAD A+N
Sbjct: 13 FKVFVGHIPLSFKEEELSGIFEKFGNILNISIIKDKRTNVPKGCAFISFSTKEEADLAIN 72
Query: 75 ACHNKKTLPG-ASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQ 133
++ G + PLQVKY+D E+E++E KLFIGML + E V+++F YG I++L
Sbjct: 73 TVNSSNQFLGDVTKPLQVKYSDNEIEKMERKLFIGMLG-SADEDTVTSVFGKYGAIEELT 131
Query: 134 ILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQ 193
I+R + KG F+K+ +E+A A+ ++GKH GSS+PL+VK+ADTE++++ ++
Sbjct: 132 IVREKEGRPKGYGFIKFSAREEAEDAIRELDGKHTFAGSSIPLIVKFADTERQKRKKQLM 191
Query: 194 KAQSQANNLP----NADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQP 249
Q+Q N N Q P+ PM Y N + +Q + + P + QP
Sbjct: 192 NTQTQPQNTWGGGGNNFYQQPNQ-QQFPM-YYDNMNMHQHQVNNN--------PFQRYQP 241
Query: 250 GFHGIIPPVNQGNAMRGASPDLSSNMGPRNY 280
+ Q N + S DL P+NY
Sbjct: 242 RSTNVYQMNQQYNEFQQESSDLFIYYLPQNY 272
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 83 PGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI-LRGSQQT 141
P +++ Q+ E ++ LFI LP+N + E+ LF YG + ++ + +
Sbjct: 241 PRSTNVYQMNQQYNEFQQESSDLFIYYLPQNYGDLELKMLFQTYGNVISAKVFIDKATNQ 300
Query: 142 SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVK 179
SK F+ Y+ + AL A+ +NG +EG + + K
Sbjct: 301 SKCFGFVTYDNPQSALNAINDLNG-FAIEGKKLKVNFK 337
>gi|410977611|ref|XP_003995197.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member 4
[Felis catus]
Length = 482
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 117/189 (61%), Gaps = 1/189 (0%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC + +R A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCALLSFCARDAAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTI 129
K+ A H ++ LP + P+QVK AD E + KLF+GML K SE +V LF +G I
Sbjct: 110 KSQTALHRQEVLPXMNRPIQVKPADSESRGGKDRKLFVGMLNKQQSEDDVRRLFEAFGNI 169
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER
Sbjct: 170 EECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTM 229
Query: 190 RRAQKAQSQ 198
RR Q+ Q
Sbjct: 230 RRMQQMAGQ 238
>gi|32482369|gb|AAP84377.1| FCA protein [Triticum aestivum]
Length = 727
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +G CFV + +EA++A+
Sbjct: 114 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGRCFVKYATSEEAERAIR 173
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 174 ALHNQCTIPGAMGPVQVRYADGERERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 233
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 234 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 289
>gi|355692855|gb|EHH27458.1| CUGBP Elav-like family member 6, partial [Macaca mulatta]
Length = 389
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 117/184 (63%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 31 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 90
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 91 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 150
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER R
Sbjct: 151 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERALR 210
Query: 191 RAQK 194
R Q+
Sbjct: 211 RMQQ 214
>gi|32482367|gb|AAP84376.1| FCA protein [Triticum aestivum]
Length = 735
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 117/176 (66%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GC FV + +EA++A+
Sbjct: 118 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCRFVKYATSEEAERAIR 177
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 178 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 237
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 238 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 293
>gi|37588904|gb|AAH04145.2| TNRC4 protein, partial [Homo sapiens]
Length = 291
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 116/178 (65%), Gaps = 1/178 (0%)
Query: 21 QVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKK 80
Q+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA +A H +K
Sbjct: 5 QIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQK 64
Query: 81 TLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ 140
TLPG + P+QVK AD E R + KLF+GML K ++ +V +F +GTI + +LRG
Sbjct: 65 TLPGMNRPIQVKPADSE-SRGDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDG 123
Query: 141 TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 124 TSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVATQ 181
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 5/87 (5%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICPSRQEADKAV 73
KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV + EA A+
Sbjct: 87 KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQTHAEAQAAI 143
Query: 74 NACHNKKTLPGASSPLQVKYADGELER 100
N H+ +TLPGASS L VK+AD E ER
Sbjct: 144 NTLHSSRTLPGASSSLVVKFADTEKER 170
>gi|351708216|gb|EHB11135.1| CUG-BP- and ETR-3-like factor 1 [Heterocephalus glaber]
Length = 513
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 122/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
+A NA HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS +G I
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCTENDIRVMFSSFGQI 160
Query: 130 KDLQILRGSQQTSKG-CAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
++ +ILRG S+G CAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 EECRILRGPDGLSRGGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K TE + MF F ++E I++ + GC F
Sbjct: 121 MKPADSEKNNVEDR-KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 224
>gi|32482392|gb|AAP84385.1| FCA protein [Triticum aestivum]
Length = 738
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 116/176 (65%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 122 VKLFVGSVPRTANEDDARPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 181
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
HN+ T+PGA P+QV+YADGE ER +EHKLF+ L + + E+ +F+ +G ++D
Sbjct: 182 TLHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNRQATAKEIEEIFAPFGHVED 241
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 242 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMGGCEQPLIVRFADPKRLR 297
>gi|387916084|gb|AFK11651.1| CUGBP Elav-like family member 2 isoform 2 [Callorhinchus milii]
Length = 513
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/229 (37%), Positives = 141/229 (61%), Gaps = 5/229 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ TE +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 44 DAIKMFVGQIPRSWTEKELKELFEPYGAVHQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 103
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 104 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQ 163
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 164 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 223
Query: 189 ARRAQKAQSQANNLPNADSQ-HPSLFGALPMGYAPPYNGYGYQASGSYG 236
RR Q+ +Q N+ + + + GAL Y +G + SG G
Sbjct: 224 QRRLQQQLAQQMQQLNSATWGNLTGLGALGPQYLAVSGQWGTKTSGEMG 272
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 124 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQIEECRILRGPDG-LSRGCAF 182
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 183 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 222
>gi|152013389|sp|Q5F3T7.2|CELF1_CHICK RecName: Full=CUGBP Elav-like family member 1; Short=CELF-1;
AltName: Full=Bruno-like protein 2; AltName: Full=CUG
triplet repeat RNA-binding protein 1; Short=CUG-BP1;
AltName: Full=CUG-BP- and ETR-3-like factor 1; AltName:
Full=RNA-binding protein BRUNOL-2
Length = 489
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 120/183 (65%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRSWCEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKILPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQKRI 197
>gi|449502234|ref|XP_002199924.2| PREDICTED: CUGBP Elav-like family member 1 [Taeniopygia guttata]
Length = 485
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 120/183 (65%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRSWCEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKILPGMHHPIQMKPADSEKSNAVEDRKLFIGMISKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKSNAVEDRKLFIGMISKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQKRI 197
>gi|60302694|ref|NP_001012539.1| CUGBP Elav-like family member 1 [Gallus gallus]
gi|60098733|emb|CAH65197.1| hypothetical protein RCJMB04_7f23 [Gallus gallus]
Length = 485
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 120/183 (65%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRSWCEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKILPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQKRI 197
>gi|82237387|sp|Q6P0B1.1|CELF2_DANRE RecName: Full=CUGBP Elav-like family member 2; Short=CELF-2;
AltName: Full=Bruno-like protein 3; AltName: Full=CUG
triplet repeat RNA-binding protein 2; Short=CUG-BP2;
AltName: Full=CUG-BP- and ETR-3-like factor 2; AltName:
Full=ELAV-type RNA-binding protein 3; Short=ETR-3;
AltName: Full=RNA-binding protein BRUNOL-3
gi|41351000|gb|AAH65686.1| Cugbp2 protein [Danio rerio]
Length = 514
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/229 (39%), Positives = 139/229 (60%), Gaps = 6/229 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++NI++D++ S+GCCFV +R+ A
Sbjct: 42 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K +E ++ +FS YG
Sbjct: 102 EAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPYGQ 161
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 162 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPMVVKFADTQKDKE 221
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGL 237
RR Q+ +Q N+ S SL G G P Y QA+ S L
Sbjct: 222 QRRLQQQLAQQMQQLNSASAWGSLTGL--TGLTPQYLALLQQATSSSNL 268
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF + ++E I++ SRGC F
Sbjct: 122 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPYGQIEECRILRGPDG-LSRGCAF 180
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 181 VTFSTRAMAQNAIKAMHQSQTMEGCSSPMVVKFADTQKDK 220
>gi|3927998|emb|CAA77110.1| elav-type RNA-binding protein [Mus musculus]
Length = 484
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 122/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Query: 189 ARR 191
RR
Sbjct: 194 KRR 196
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHK 104
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + +
Sbjct: 153 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEKRR 196
>gi|449274607|gb|EMC83685.1| CUG-BP- and ETR-3-like factor 1 [Columba livia]
Length = 515
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 120/183 (65%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRSWCEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKILPGMHHPIQMKPADSEKSNAVEDRKLFIGMISKKCNENDIRVMFSPFGQ 160
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K E + MF F ++E I++ SRGC F
Sbjct: 121 MKPADSEKSNAVEDRKLFIGMISKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRAMAQTAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQKRI 224
>gi|32482385|gb|AAP84382.1| FCA protein [Triticum aestivum]
Length = 700
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 116/176 (65%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG P+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 105 VKLFVGSAPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 164
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+ ADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 165 ALHNQCTIPGAMGPVQVRCADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVED 224
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 225 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 280
>gi|66825827|ref|XP_646268.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60474730|gb|EAL72667.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 368
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 115/175 (65%), Gaps = 2/175 (1%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 76
+FVG +P M E + +F +F + ++ IIKDK T S+GC F+ +++EAD A+N
Sbjct: 20 VFVGHIPSSMNEEGVSQIFNKFGNILDITIIKDKRTNVSKGCAFITFSTKEEADNALNTT 79
Query: 77 HNKKT-LPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQIL 135
+ T L + PLQVKY+D E+E++E KLFIGML + E ++ LF YG I+DL I+
Sbjct: 80 NESGTFLENMNKPLQVKYSDNEIEKMERKLFIGMLGTS-DEDQIRILFGNYGIIEDLNIV 138
Query: 136 RGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
R KG F+KY T++++ AL I+GKH + GS++P++VK+ADTE++++ +
Sbjct: 139 REKDGKPKGYGFIKYSTRDESENALREIDGKHTLPGSNLPIIVKFADTERQKRKK 193
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 103 HKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI-LRGSQQTSKGCAFLKYETKEQALAALE 161
+ LFI LP + E+ LF+ YG + ++ + + Q SK F+ Y+ + A+AA++
Sbjct: 287 NDLFIYYLPFTYGDEELKQLFAPYGNVISSKVFIDKNTQQSKCFGFVSYDNTQSAIAAIQ 346
Query: 162 AINGKHKMEGSSVPLVVK 179
+NG+ +EG + + K
Sbjct: 347 ELNGR-AIEGKKLKVNFK 363
>gi|35903017|ref|NP_919382.1| CUGBP Elav-like family member 2 [Danio rerio]
gi|19909954|dbj|BAB87828.1| elav-type ribonucleoprotein-3 [Danio rerio]
Length = 486
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/229 (39%), Positives = 139/229 (60%), Gaps = 6/229 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++NI++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K +E ++ +FS YG
Sbjct: 74 EAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPYGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGL 237
RR Q+ +Q N+ S SL G G P Y QA+ S L
Sbjct: 194 QRRLQQQLAQQMQQLNSASAWGSLTGL--TGLTPQYLALLQQATSSSNL 240
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF + ++E I++ SRGC F
Sbjct: 94 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPYGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 153 VTFSTRAMAQNAIKAMHQSQTMEGCSSPMVVKFADTQKDK 192
>gi|119588316|gb|EAW67910.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_e [Homo
sapiens]
Length = 283
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 197
>gi|66269433|gb|AAY43161.1| napor protein isoform [Danio rerio]
Length = 483
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 90/229 (39%), Positives = 139/229 (60%), Gaps = 6/229 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++NI++D++ S+GCCFV +R+ A
Sbjct: 60 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAAL 119
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K +E ++ +FS YG
Sbjct: 120 EAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPYGQ 179
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 180 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPMVVKFADTQKDKE 239
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGL 237
RR Q+ +Q N+ S SL G G P Y QA+ S L
Sbjct: 240 QRRLQQQLAQQMQQLNSASAWGSLTGL--TGLTPQYLALLQQATSSSNL 286
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF + ++E I++ SRGC F
Sbjct: 140 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPYGQIEECRILRGPDG-LSRGCAF 198
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 199 VTFSTRAMAQNAIKAMHQSQTMEGCSSPMVVKFADTQKDK 238
>gi|60729622|pir||JC7967 Napor protein - zebra fish
gi|14030309|gb|AAK52851.1|AF321194_1 Napor [Danio rerio]
Length = 441
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 90/229 (39%), Positives = 139/229 (60%), Gaps = 6/229 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++NI++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K +E ++ +FS YG
Sbjct: 74 EAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPYGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGL 237
RR Q+ +Q N+ S SL G G P Y QA+ S L
Sbjct: 194 QRRLQQQLAQQMQQLNSASAWGSLTGL--TGLTPQYLALLQQATSSSNL 240
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF + ++E I++ SRGC F
Sbjct: 94 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPYGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 153 VTFSTRAMAQNAIKAMHQSQTMEGCSSPMVVKFADTQKDK 192
>gi|66269429|gb|AAY43159.1| napor protein short isoform [Danio rerio]
Length = 473
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 90/229 (39%), Positives = 139/229 (60%), Gaps = 6/229 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++NI++D++ S+GCCFV +R+ A
Sbjct: 46 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAAL 105
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K +E ++ +FS YG
Sbjct: 106 EAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPYGQ 165
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 166 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPMVVKFADTQKDKE 225
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGL 237
RR Q+ +Q N+ S SL G G P Y QA+ S L
Sbjct: 226 QRRLQQQLAQQMQQLNSASAWGSLTGL--TGLTPQYLALLQQATSSSNL 272
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF + ++E I++ SRGC F
Sbjct: 126 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPYGQIEECRILRGPDG-LSRGCAF 184
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 185 VTFSTRAMAQNAIKAMHQSQTMEGCSSPMVVKFADTQKDK 224
>gi|148224750|ref|NP_001079970.1| CUGBP Elav-like family member 1-B [Xenopus laevis]
gi|47123025|gb|AAH70706.1| Cugbp1-b protein [Xenopus laevis]
Length = 529
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 133/219 (60%), Gaps = 17/219 (7%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E +L +F+++ V E+N+++D++ S+GCCF+ +R+ A
Sbjct: 41 DSIKMFVGQVPRSWSEKELRELFEQYGAVYEINVLRDRSQNPPQSKGCCFITFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGE-----LERL---EH-------KLFIGMLPKNVS 115
+A NA HN K LPG P+Q+K AD E L + EH KLFIGM+ K +
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNGGLNTVLFPEHPASVEDRKLFIGMVSKKCN 160
Query: 116 EAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVP 175
E ++ LFS +G I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P
Sbjct: 161 ENDIRTLFSQFGQIEESRILRGPDGMSRGCAFITFTTRSMAQMAIKAMHQAQTMEGCSSP 220
Query: 176 LVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFG 214
+VVK+ADT+K+++ +R + Q NA S +L G
Sbjct: 221 IVVKFADTQKDKEQKRMTQQLQQQMQQLNAASMWGNLAG 259
>gi|380807355|gb|AFE75553.1| CUGBP Elav-like family member 6 isoform 1, partial [Macaca mulatta]
Length = 226
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 116/180 (64%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A KA +
Sbjct: 45 IKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQS 104
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I++ +
Sbjct: 105 ALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTV 164
Query: 135 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER RR Q+
Sbjct: 165 LRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERALRRMQQ 224
>gi|32482127|gb|AAP84414.1| FCA protein [Triticum aestivum]
Length = 740
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 119/187 (63%), Gaps = 5/187 (2%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
S + KSS VKL VG VP+ E + +F++ V EV +I+D+ T +GCCFV
Sbjct: 115 SDHDNKSS--YVKLIVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKY 172
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVS 120
+ +E + A+ A HN+ T+PGA P+QV+Y DGE ER +EHKLF+ L K + E+
Sbjct: 173 ATSEETESAIRALHNQCTIPGAMGPVQVRYTDGEKERHGSIEHKLFVASLNKQATAKEIE 232
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
+F+ +G ++D+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G PL+V++
Sbjct: 233 EIFAPFGHVEDVYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRGCEQPLIVRF 292
Query: 181 ADTEKER 187
AD ++ R
Sbjct: 293 ADPKRPR 299
>gi|440911412|gb|ELR61086.1| CUGBP Elav-like family member 4 [Bos grunniens mutus]
Length = 487
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 82/199 (41%), Positives = 120/199 (60%), Gaps = 11/199 (5%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 109
Query: 71 KAVNACH-NKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEV 119
KA +A H ++K L G + P+QVK AD E + KLF+GML K SE +V
Sbjct: 110 KAQSALHADEKHLGGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDV 169
Query: 120 SALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVK 179
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK
Sbjct: 170 RRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVK 229
Query: 180 WADTEKERQARRAQKAQSQ 198
+ADT+KER RR Q+ Q
Sbjct: 230 FADTDKERTMRRMQQMAGQ 248
>gi|410908151|ref|XP_003967554.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 1 [Takifugu
rubripes]
Length = 530
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 117/180 (65%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ F V ++NI++D+TT S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRAWSETELRELFEPFGAVHQINILRDRTTNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K E E+ +FS +G
Sbjct: 116 EAQNALHNIKTLSGMHHPIQMKPADSEKTSAVEDRKLFIGMVSKKYGENEIRMMFSSFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ ++LRG S+GCAF+ + T+ A A++ ++ MEG S PLVVK ADT+++++
Sbjct: 176 IEECRVLRGPDGQSRGCAFVTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDKE 235
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK S+ E KLF+G V K E ++ MF F ++E +++ + SRGC F
Sbjct: 136 MKPADSEKTSAVEDRKLFIGMVSKKYGENEIRMMFSSFGQIEECRVLRGPDGQ-SRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ H+ +T+ G SSPL VK AD + ++
Sbjct: 195 VTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDK 234
>gi|66269431|gb|AAY43160.1| napor protein long isoform [Danio rerio]
Length = 493
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/216 (39%), Positives = 134/216 (62%), Gaps = 6/216 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++NI++D++ S+GCCFV +R+ A
Sbjct: 46 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAAL 105
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K +E ++ +FS YG
Sbjct: 106 EAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPYGQ 165
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 166 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPMVVKFADTQKDKE 225
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPY 224
RR Q+ +Q N+ S SL G G P Y
Sbjct: 226 QRRLQQQLAQQMQQLNSASAWGSLTGL--TGLTPQY 259
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF + ++E I++ SRGC F
Sbjct: 126 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPYGQIEECRILRGPDG-LSRGCAF 184
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 185 VTFSTRAMAQNAIKAMHQSQTMEGCSSPMVVKFADTQKDK 224
>gi|395827349|ref|XP_003786867.1| PREDICTED: CUGBP Elav-like family member 2 isoform 2 [Otolemur
garnettii]
Length = 490
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQIEECRILRGPDGL-SRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 153 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 192
>gi|444707599|gb|ELW48864.1| CUGBP Elav-like family member 1 [Tupaia chinensis]
Length = 487
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 121/184 (65%), Gaps = 5/184 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKG-CAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
I++ +ILRG S+G CAF+ + T+ A A++A++ MEG S P+VVK+ADT+K++
Sbjct: 134 IEECRILRGPDGLSRGGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDK 193
Query: 188 QARR 191
+ +R
Sbjct: 194 EQKR 197
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 57/105 (54%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ + GC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGGCAF 153
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 154 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 198
>gi|395827353|ref|XP_003786869.1| PREDICTED: CUGBP Elav-like family member 2 isoform 4 [Otolemur
garnettii]
Length = 488
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQIEECRILRGPDGL-SRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 153 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 192
>gi|390338611|ref|XP_781047.3| PREDICTED: CUGBP Elav-like family member 3-A-like isoform 2
[Strongylocentrotus purpuratus]
Length = 520
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 118/182 (64%), Gaps = 5/182 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E+ +++D+ T +GC F+ R+ A +A
Sbjct: 46 DAIKLFVGQIPRNLEEKDLRPIFEDFGRIYELTVLRDRFTGVHKGCAFLTYCDRESAIRA 105
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A H +KTLPG + LQVK AD E + KLF+GML K +E EV A+F+ +G I +
Sbjct: 106 QKALHEQKTLPGMTRALQVKPADSESRGEDRKLFVGMLNKAQTEEEVRAMFTHFGKIDEC 165
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
IL+ S+GCAF+K+ T+++A+ A+ +IN ++ LVVK+ADTEKERQ RR
Sbjct: 166 TILKDPNGISRGCAFVKFSTRKEAVGAINSIN-----MSANPNLVVKFADTEKERQLRRM 220
Query: 193 QK 194
Q+
Sbjct: 221 QQ 222
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 15/126 (11%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ +S E KLFVG + K TE ++ AMF F +DE I+KD SRGC FV +R
Sbjct: 128 DSESRGEDRKLFVGMLNKAQTEEEVRAMFTHFGKIDECTILKDPNG-ISRGCAFVKFSTR 186
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL-----FIGMLPKNVSEAEVSA 121
+EA A+N+ + A+ L VK+AD E ER ++ +G+ ++ VS+
Sbjct: 187 KEAVGAINSINMS-----ANPNLVVKFADTEKERQLRRMQQMSNSMGLF----NQMAVSS 237
Query: 122 LFSIYG 127
S+YG
Sbjct: 238 PISLYG 243
>gi|410908153|ref|XP_003967555.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 2 [Takifugu
rubripes]
Length = 510
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 117/180 (65%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ F V ++NI++D+TT S+GCCFV +R+ A
Sbjct: 38 DAIKMFVGQIPRAWSETELRELFEPFGAVHQINILRDRTTNPPQSKGCCFVTFYTRKAAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K E E+ +FS +G
Sbjct: 98 EAQNALHNIKTLSGMHHPIQMKPADSEKTSAVEDRKLFIGMVSKKYGENEIRMMFSSFGQ 157
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ ++LRG S+GCAF+ + T+ A A++ ++ MEG S PLVVK ADT+++++
Sbjct: 158 IEECRVLRGPDGQSRGCAFVTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDKE 217
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK S+ E KLF+G V K E ++ MF F ++E +++ + SRGC F
Sbjct: 118 MKPADSEKTSAVEDRKLFIGMVSKKYGENEIRMMFSSFGQIEECRVLRGPDGQ-SRGCAF 176
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ H+ +T+ G SSPL VK AD + ++
Sbjct: 177 VTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDK 216
>gi|410908161|ref|XP_003967559.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 6 [Takifugu
rubripes]
Length = 538
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 117/180 (65%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ F V ++NI++D+TT S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRAWSETELRELFEPFGAVHQINILRDRTTNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K E E+ +FS +G
Sbjct: 116 EAQNALHNIKTLSGMHHPIQMKPADSEKTSAVEDRKLFIGMVSKKYGENEIRMMFSSFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ ++LRG S+GCAF+ + T+ A A++ ++ MEG S PLVVK ADT+++++
Sbjct: 176 IEECRVLRGPDGQSRGCAFVTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDKE 235
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK S+ E KLF+G V K E ++ MF F ++E +++ + SRGC F
Sbjct: 136 MKPADSEKTSAVEDRKLFIGMVSKKYGENEIRMMFSSFGQIEECRVLRGPDGQ-SRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ H+ +T+ G SSPL VK AD + ++
Sbjct: 195 VTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDK 234
>gi|410908159|ref|XP_003967558.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 5 [Takifugu
rubripes]
Length = 490
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 117/180 (65%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ F V ++NI++D+TT S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRAWSETELRELFEPFGAVHQINILRDRTTNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K E E+ +FS +G
Sbjct: 116 EAQNALHNIKTLSGMHHPIQMKPADSEKTSAVEDRKLFIGMVSKKYGENEIRMMFSSFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ ++LRG S+GCAF+ + T+ A A++ ++ MEG S PLVVK ADT+++++
Sbjct: 176 IEECRVLRGPDGQSRGCAFVTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDKE 235
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK S+ E KLF+G V K E ++ MF F ++E +++ + SRGC F
Sbjct: 136 MKPADSEKTSAVEDRKLFIGMVSKKYGENEIRMMFSSFGQIEECRVLRGPDGQ-SRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ H+ +T+ G SSPL VK AD + ++
Sbjct: 195 VTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDK 234
>gi|395827347|ref|XP_003786866.1| PREDICTED: CUGBP Elav-like family member 2 isoform 1 [Otolemur
garnettii]
Length = 521
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 45 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 104
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 105 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQ 164
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 165 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 224
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 125 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQIEECRILRGPDG-LSRGCAF 183
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 184 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 223
>gi|395827351|ref|XP_003786868.1| PREDICTED: CUGBP Elav-like family member 2 isoform 3 [Otolemur
garnettii]
Length = 514
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 38 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 98 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQ 157
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 158 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 217
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 118 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQIEECRILRGPDG-LSRGCAF 176
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 177 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 216
>gi|47224440|emb|CAG08690.1| unnamed protein product [Tetraodon nigroviridis]
Length = 515
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 117/180 (65%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ F V ++NI++D+TT S+GCCFV +R+ A
Sbjct: 16 DAIKMFVGQIPRSWSETELRELFEPFGAVHQINILRDRTTNPPQSKGCCFVTFYTRKAAL 75
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K E E+ +FS +G
Sbjct: 76 EAQNALHNIKTLSGMHHPIQMKPADSEKTSAVEDRKLFIGMVSKKYGENEIRMMFSSFGQ 135
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ ++LRG S+GCAF+ + T+ A A++ ++ MEG S PLVVK ADT+++++
Sbjct: 136 IEECRVLRGPDGQSRGCAFVTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDKE 195
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK S+ E KLF+G V K E ++ MF F ++E +++ + SRGC F
Sbjct: 96 MKPADSEKTSAVEDRKLFIGMVSKKYGENEIRMMFSSFGQIEECRVLRGPDGQ-SRGCAF 154
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ H+ +T+ G SSPL VK AD + ++
Sbjct: 155 VTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDK 194
>gi|410908157|ref|XP_003967557.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 4 [Takifugu
rubripes]
Length = 482
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 117/180 (65%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ F V ++NI++D+TT S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRAWSETELRELFEPFGAVHQINILRDRTTNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K E E+ +FS +G
Sbjct: 116 EAQNALHNIKTLSGMHHPIQMKPADSEKTSAVEDRKLFIGMVSKKYGENEIRMMFSSFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ ++LRG S+GCAF+ + T+ A A++ ++ MEG S PLVVK ADT+++++
Sbjct: 176 IEECRVLRGPDGQSRGCAFVTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDKE 235
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK S+ E KLF+G V K E ++ MF F ++E +++ + SRGC F
Sbjct: 136 MKPADSEKTSAVEDRKLFIGMVSKKYGENEIRMMFSSFGQIEECRVLRGPDGQ-SRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ H+ +T+ G SSPL VK AD + ++
Sbjct: 195 VTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDK 234
>gi|348513017|ref|XP_003444039.1| PREDICTED: CUGBP Elav-like family member 2-like [Oreochromis
niloticus]
Length = 531
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 117/180 (65%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ F V ++NI++D+T S+GCCFV +R+ A
Sbjct: 58 DSIKMFVGQIPRSWSETELKELFEPFGAVHQINILRDRTQNPPQSKGCCFVTFYTRKAAL 117
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLF+GM+ K E EV +FS +G
Sbjct: 118 EAQNALHNIKTLSGMHHPIQMKPADSEKTSAVEDRKLFVGMVSKKYGENEVRMMFSSFGQ 177
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++ ++ MEG S PLVVK+ADT+++++
Sbjct: 178 IEECRILRGPDGQSRGCAFVTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKFADTQRDKE 237
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK S+ E KLFVG V K E ++ MF F ++E I++ + SRGC F
Sbjct: 138 MKPADSEKTSAVEDRKLFVGMVSKKYGENEVRMMFSSFGQIEECRILRGPDGQ-SRGCAF 196
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ H+ +T+ G SSPL VK+AD + ++
Sbjct: 197 VTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKFADTQRDK 236
>gi|410908155|ref|XP_003967556.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 3 [Takifugu
rubripes]
Length = 468
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 117/180 (65%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ F V ++NI++D+TT S+GCCFV +R+ A
Sbjct: 42 DAIKMFVGQIPRAWSETELRELFEPFGAVHQINILRDRTTNPPQSKGCCFVTFYTRKAAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K E E+ +FS +G
Sbjct: 102 EAQNALHNIKTLSGMHHPIQMKPADSEKTSAVEDRKLFIGMVSKKYGENEIRMMFSSFGQ 161
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ ++LRG S+GCAF+ + T+ A A++ ++ MEG S PLVVK ADT+++++
Sbjct: 162 IEECRVLRGPDGQSRGCAFVTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDKE 221
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK S+ E KLF+G V K E ++ MF F ++E +++ + SRGC F
Sbjct: 122 MKPADSEKTSAVEDRKLFIGMVSKKYGENEIRMMFSSFGQIEECRVLRGPDGQ-SRGCAF 180
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ H+ +T+ G SSPL VK AD + ++
Sbjct: 181 VTFATRAMAQNAIKTMHHSQTMEGCSSPLVVKLADTQRDK 220
>gi|237757269|ref|NP_001153764.1| CUGBP Elav-like family member 2 isoform 7 [Mus musculus]
Length = 472
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 50 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 110 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 169
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 170 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 229
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 130 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 188
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 189 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 228
>gi|74220804|dbj|BAE31371.1| unnamed protein product [Mus musculus]
Length = 440
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGL-SRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 153 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 192
>gi|296206140|ref|XP_002750082.1| PREDICTED: CUGBP Elav-like family member 2 [Callithrix jacchus]
Length = 531
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 57 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 116
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 117 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 176
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 177 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 236
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 137 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 195
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 196 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 235
>gi|410960910|ref|XP_003987030.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Felis catus]
Length = 443
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/217 (39%), Positives = 129/217 (59%), Gaps = 12/217 (5%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 3 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 62
Query: 71 KAVNACHNKKTLPGASSPLQVKYA--DGELERLEHKLFIGMLPKNVSEAEVSALFSIYGT 128
KA +A H +KTLPG + P+QVK A +G R + KLF+GML K E +V LF +G
Sbjct: 63 KAQSALHEQKTLPGMNRPIQVKPAASEGRGGR-DRKLFVGMLGKQQGEEDVRRLFQPFGH 121
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +LR TSKGCAF+K+ ++ +A AA+++++G M G+S LVVK ADT++ER
Sbjct: 122 IEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQSLHGSRTMAGASSSLVVKLADTDRERA 181
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYN 225
RR Q+ Q HP+ LP+G Y
Sbjct: 182 LRRMQQMAGQLGAF------HPA---PLPLGACGAYT 209
>gi|159032033|ref|NP_001103699.1| CUGBP Elav-like family member 2 isoform 2 [Mus musculus]
gi|74209492|dbj|BAE23295.1| unnamed protein product [Mus musculus]
Length = 524
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 50 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 110 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 169
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 170 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 229
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 130 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 188
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 189 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 228
>gi|194375526|dbj|BAG56708.1| unnamed protein product [Homo sapiens]
Length = 496
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 22 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 81
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 82 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 141
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 142 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 201
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 102 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 160
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 161 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 200
>gi|55731735|emb|CAH92572.1| hypothetical protein [Pongo abelii]
Length = 490
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 153 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 192
>gi|159032035|ref|NP_001103700.1| CUGBP Elav-like family member 2 isoform 3 [Mus musculus]
gi|74227938|dbj|BAE37963.1| unnamed protein product [Mus musculus]
Length = 520
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 50 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 110 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 169
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 170 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 229
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 130 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 188
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 189 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 228
>gi|351703688|gb|EHB06607.1| CUG-BP- and ETR-3-like factor 2, partial [Heterocephalus glaber]
Length = 496
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 20 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 79
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 80 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 139
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 140 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 199
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 100 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGL-SRGCAF 158
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 159 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 198
>gi|74142177|dbj|BAE31857.1| unnamed protein product [Mus musculus]
Length = 495
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 21 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 80
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 81 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 140
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 141 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 200
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 101 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 159
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 160 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 199
>gi|159032039|ref|NP_001103702.1| CUGBP Elav-like family member 2 isoform 5 [Mus musculus]
gi|4249672|gb|AAD13763.1| apoptosis-related RNA binding protein [Mus musculus]
gi|120538103|gb|AAI29097.1| Cugbp2 protein [Rattus norvegicus]
Length = 484
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 153 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 192
>gi|124513886|ref|XP_001350299.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|23615716|emb|CAD52708.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 509
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 120/186 (64%), Gaps = 12/186 (6%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLF+G+VPK++ E QL +F+E+ +V+EV II+DK T + FV S EAD A+
Sbjct: 85 IKLFIGRVPKNIEEDQLRPIFEEYGIVNEVVIIRDKITNVHKSSAFVKMASISEADNAIR 144
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL-----------EHKLFIGMLPKNVSEAEVSALF 123
+N+KTL LQVKYA GEL +L + KLFIG LPKN++E + +F
Sbjct: 145 LLNNQKTLDAQLGSLQVKYASGELNKLGFPQNIESGVDQAKLFIGSLPKNITEDNIKEMF 204
Query: 124 SIYGTIKDLQILR-GSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
S YGT++++ I++ S KGC+F+K+ KEQAL A++++NGK +EG + P+ V++A+
Sbjct: 205 SPYGTVEEVFIMKDNSTGLGKGCSFVKFSYKEQALYAIKSLNGKKTLEGCTRPVEVRFAE 264
Query: 183 TEKERQ 188
+ +Q
Sbjct: 265 PKSSKQ 270
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 57/87 (65%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
+S ++ KLF+G +PK++TE + MF + V+EV I+KD +T +GC FV +++
Sbjct: 178 ESGVDQAKLFIGSLPKNITEDNIKEMFSPYGTVEEVFIMKDNSTGLGKGCSFVKFSYKEQ 237
Query: 69 ADKAVNACHNKKTLPGASSPLQVKYAD 95
A A+ + + KKTL G + P++V++A+
Sbjct: 238 ALYAIKSLNGKKTLEGCTRPVEVRFAE 264
>gi|197099692|ref|NP_001125976.1| CUGBP Elav-like family member 1 [Pongo abelii]
gi|75070672|sp|Q5R995.1|CELF1_PONAB RecName: Full=CUGBP Elav-like family member 1; Short=CELF-1;
AltName: Full=Bruno-like protein 2; AltName: Full=CUG
triplet repeat RNA-binding protein 1; Short=CUG-BP1;
AltName: Full=CUG-BP- and ETR-3-like factor 1; AltName:
Full=RNA-binding protein BRUNOL-2
gi|55729876|emb|CAH91665.1| hypothetical protein [Pongo abelii]
Length = 513
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 119/183 (65%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 160
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +IL G S+GCA + + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 161 IEECRILWGPDGLSRGCALVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 220
Query: 189 ARR 191
+R
Sbjct: 221 QKR 223
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I+ SRGC
Sbjct: 121 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILWGPDG-LSRGCAL 179
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 180 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 224
>gi|1568643|gb|AAB09040.1| RNA-binding protein BRUNOL3 [Homo sapiens]
Length = 490
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGL-SRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 153 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 192
>gi|410963193|ref|XP_003988150.1| PREDICTED: CUGBP Elav-like family member 2 isoform 2 [Felis catus]
Length = 496
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 22 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 81
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 82 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 141
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 142 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 201
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 102 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 160
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 161 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 200
>gi|159032037|ref|NP_001103701.1| CUGBP Elav-like family member 2 isoform 4 [Mus musculus]
gi|3452501|emb|CAA09102.1| ETR-R3a protein [Rattus norvegicus]
gi|74144402|dbj|BAE36053.1| unnamed protein product [Mus musculus]
Length = 490
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 153 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 192
>gi|22137759|gb|AAH36391.1| CUGBP2 protein [Homo sapiens]
gi|119606753|gb|EAW86347.1| CUG triplet repeat, RNA binding protein 2, isoform CRA_b [Homo
sapiens]
Length = 521
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 33 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 92
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 93 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 152
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 153 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 212
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 113 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 171
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 172 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 211
>gi|441603563|ref|XP_003262134.2| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member 4
[Nomascus leucogenys]
Length = 458
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 119/198 (60%), Gaps = 11/198 (5%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R++A
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCSFLSYCQREQA- 108
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVS 120
KA + H ++ LP + P+QVK AD E + KLF+GML K SE +V
Sbjct: 109 KAHSDMHKQEVLPXMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVR 168
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+
Sbjct: 169 RLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 228
Query: 181 ADTEKERQARRAQKAQSQ 198
ADT+KER RR Q+ Q
Sbjct: 229 ADTDKERTMRRMQQMAGQ 246
>gi|281345849|gb|EFB21433.1| hypothetical protein PANDA_019092 [Ailuropoda melanoleuca]
Length = 512
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 20 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 79
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 80 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 139
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 140 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 199
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 100 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 158
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 159 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 198
>gi|402879613|ref|XP_003903426.1| PREDICTED: CUGBP Elav-like family member 2 isoform 2 [Papio anubis]
gi|426363973|ref|XP_004049101.1| PREDICTED: CUGBP Elav-like family member 2 isoform 1 [Gorilla
gorilla gorilla]
gi|14701777|gb|AAK72223.1| neuroplastoma apoptosis-related RNA-binding protein 3 [Homo
sapiens]
gi|194390100|dbj|BAG61812.1| unnamed protein product [Homo sapiens]
Length = 484
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 153 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 192
>gi|402879617|ref|XP_003903428.1| PREDICTED: CUGBP Elav-like family member 2 isoform 4 [Papio anubis]
Length = 533
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 45 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 104
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 105 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 164
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 165 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 224
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 125 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 183
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 184 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 223
>gi|68303645|ref|NP_001020247.1| CUGBP Elav-like family member 2 isoform 1 [Homo sapiens]
gi|332833597|ref|XP_003312503.1| PREDICTED: CUGBP, Elav-like family member 2 isoform 3 [Pan
troglodytes]
gi|397515224|ref|XP_003827856.1| PREDICTED: CUGBP Elav-like family member 2 isoform 2 [Pan paniscus]
gi|403278087|ref|XP_003930660.1| PREDICTED: CUGBP Elav-like family member 2 isoform 3 [Saimiri
boliviensis boliviensis]
gi|4104559|gb|AAD02074.1| neuroblastoma apoptosis-related RNA binding protein [Homo sapiens]
gi|15217394|gb|AAK92699.1| neuroplastoma apoptosis-related RNA-binding protein 1 [Homo
sapiens]
gi|119606754|gb|EAW86348.1| CUG triplet repeat, RNA binding protein 2, isoform CRA_c [Homo
sapiens]
Length = 490
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 153 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 192
>gi|189054263|dbj|BAG36783.1| unnamed protein product [Homo sapiens]
Length = 509
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 33 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 92
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 93 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 152
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 153 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 212
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 113 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 171
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 172 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 211
>gi|74198996|dbj|BAE30715.1| unnamed protein product [Mus musculus]
Length = 488
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 153 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 192
>gi|354467968|ref|XP_003496439.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 1
[Cricetulus griseus]
Length = 520
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 50 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 110 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 169
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 170 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 229
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 130 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 188
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 189 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 228
>gi|410918516|ref|XP_003972731.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 1 [Takifugu
rubripes]
Length = 521
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 139/229 (60%), Gaps = 6/229 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++NI++D++ S+GCCFV +R+ A
Sbjct: 46 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAAL 105
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 106 EAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQ 165
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 166 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 225
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGL 237
RR Q+ +Q N+ + SL G G P Y QA+ S L
Sbjct: 226 QRRLQQQLAQQMQQLNSATTWGSLTGL--GGLTPQYLALLQQAASSGNL 272
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 126 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQIEECRILRGPDG-LSRGCAF 184
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 185 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 224
>gi|301787201|ref|XP_002929016.1| PREDICTED: CUGBP Elav-like family member 2-like [Ailuropoda
melanoleuca]
Length = 488
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGL-SRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 153 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 192
>gi|194227176|ref|XP_001916706.1| PREDICTED: CUGBP, Elav-like family member 2 isoform 1 [Equus
caballus]
gi|344277695|ref|XP_003410635.1| PREDICTED: CUGBP Elav-like family member 2-like [Loxodonta
africana]
gi|345793487|ref|XP_003433765.1| PREDICTED: CUGBP, Elav-like family member 2 [Canis lupus
familiaris]
Length = 488
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 153 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 192
>gi|134152719|ref|NP_001077060.1| CUGBP Elav-like family member 2 isoform 4 [Homo sapiens]
gi|332833595|ref|XP_003312502.1| PREDICTED: CUGBP, Elav-like family member 2 isoform 2 [Pan
troglodytes]
gi|397515226|ref|XP_003827857.1| PREDICTED: CUGBP Elav-like family member 2 isoform 3 [Pan paniscus]
gi|403278085|ref|XP_003930659.1| PREDICTED: CUGBP Elav-like family member 2 isoform 2 [Saimiri
boliviensis boliviensis]
gi|16660677|gb|AAL27627.1|AF432906_1 neuroblastoma apoptosis-related RNA-binding protein isoform 4 [Homo
sapiens]
gi|119606752|gb|EAW86346.1| CUG triplet repeat, RNA binding protein 2, isoform CRA_a [Homo
sapiens]
gi|221046096|dbj|BAH14725.1| unnamed protein product [Homo sapiens]
gi|410263774|gb|JAA19853.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
Length = 488
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 153 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 192
>gi|344239315|gb|EGV95418.1| CUG-BP- and ETR-3-like factor 2 [Cricetulus griseus]
Length = 508
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 38 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 98 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 157
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 158 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 217
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 118 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGL-SRGCAF 176
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 177 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 216
>gi|383415259|gb|AFH30843.1| CUGBP Elav-like family member 2 isoform 4 [Macaca mulatta]
Length = 488
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 153 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 192
>gi|119606755|gb|EAW86349.1| CUG triplet repeat, RNA binding protein 2, isoform CRA_d [Homo
sapiens]
Length = 509
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 33 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 92
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 93 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 152
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 153 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 212
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 113 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 171
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 172 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 211
>gi|410963195|ref|XP_003988151.1| PREDICTED: CUGBP Elav-like family member 2 isoform 3 [Felis catus]
Length = 484
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 153 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 192
>gi|410225362|gb|JAA09900.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
gi|410263776|gb|JAA19854.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
gi|410305934|gb|JAA31567.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
gi|410305938|gb|JAA31569.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
gi|410349361|gb|JAA41284.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
gi|410349363|gb|JAA41285.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
Length = 515
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 45 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 104
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 105 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 164
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 165 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 224
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 125 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 183
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 184 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 223
>gi|81911882|sp|Q792H5.1|CELF2_RAT RecName: Full=CUGBP Elav-like family member 2; Short=CELF-2;
AltName: Full=Bruno-like protein 3; AltName: Full=CUG
triplet repeat RNA-binding protein 2; Short=CUG-BP2;
AltName: Full=CUG-BP- and ETR-3-like factor 2; AltName:
Full=ELAV-type RNA-binding protein 3; Short=ETR-3;
Short=Protein ETR-R3; AltName: Full=Neuroblastoma
apoptosis-related RNA-binding protein; Short=rNapor;
AltName: Full=RNA-binding protein BRUNOL-3
gi|81917931|sp|Q9Z0H4.1|CELF2_MOUSE RecName: Full=CUGBP Elav-like family member 2; Short=CELF-2;
AltName: Full=Bruno-like protein 3; AltName: Full=CUG
triplet repeat RNA-binding protein 2; Short=CUG-BP2;
AltName: Full=CUG-BP- and ETR-3-like factor 2; AltName:
Full=ELAV-type RNA-binding protein 3; Short=ETR-3;
Short=mETR-3; AltName: Full=Neuroblastoma
apoptosis-related RNA-binding protein; Short=mNapor;
AltName: Full=RNA-binding protein BRUNOL-3
gi|4249670|gb|AAD13762.1| apoptosis-related RNA binding protein [Rattus norvegicus]
gi|4249674|gb|AAD13764.1| apoptosis-related RNA binding protein [Mus musculus]
gi|20073073|gb|AAH26856.1| Cugbp2 protein [Mus musculus]
Length = 508
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 38 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 98 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 157
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 158 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 217
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 118 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 176
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 177 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 216
>gi|348521218|ref|XP_003448123.1| PREDICTED: CUGBP Elav-like family member 2-like [Oreochromis
niloticus]
Length = 483
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 139/229 (60%), Gaps = 6/229 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++NI++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGL 237
RR Q+ +Q N+ + SL G G P Y QA+ S L
Sbjct: 194 QRRLQQQLAQQMQQLNSATTWGSLTGL--GGLTPQYLALLQQAASSGNL 240
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQIEECRILRGPDGL-SRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 153 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 192
>gi|124286791|ref|NP_034290.2| CUGBP Elav-like family member 2 isoform 6 [Mus musculus]
Length = 478
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 136 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 195 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
>gi|402879615|ref|XP_003903427.1| PREDICTED: CUGBP Elav-like family member 2 isoform 3 [Papio anubis]
Length = 521
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 45 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 104
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 105 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 164
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 165 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 224
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 125 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 183
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 184 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 223
>gi|380808892|gb|AFE76321.1| CUGBP Elav-like family member 2 isoform 2 [Macaca mulatta]
Length = 515
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 45 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 104
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 105 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 164
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 165 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 224
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 125 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 183
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 184 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 223
>gi|332833599|ref|XP_507653.3| PREDICTED: CUGBP, Elav-like family member 2 isoform 4 [Pan
troglodytes]
gi|410349369|gb|JAA41288.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
Length = 521
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 45 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 104
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 105 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 164
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 165 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 224
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 125 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 183
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 184 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 223
>gi|194388952|dbj|BAG61493.1| unnamed protein product [Homo sapiens]
Length = 514
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 38 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 98 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 157
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 158 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 217
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 118 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 176
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 177 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 216
>gi|134152680|ref|NP_006552.3| CUGBP Elav-like family member 2 isoform 2 [Homo sapiens]
gi|348575363|ref|XP_003473459.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 2 [Cavia
porcellus]
Length = 521
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 45 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 104
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 105 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 164
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 165 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 224
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 125 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 183
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 184 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 223
>gi|14701786|gb|AAK72224.1| neuroplastoma apoptosis-related RNA-binding protein 2 [Homo
sapiens]
Length = 509
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 33 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 92
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 93 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 152
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 153 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 212
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 113 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 171
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 172 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 211
>gi|68303647|ref|NP_001020248.1| CUGBP Elav-like family member 2 isoform 3 [Homo sapiens]
gi|402879611|ref|XP_003903425.1| PREDICTED: CUGBP Elav-like family member 2 isoform 1 [Papio anubis]
gi|426363975|ref|XP_004049102.1| PREDICTED: CUGBP Elav-like family member 2 isoform 2 [Gorilla
gorilla gorilla]
gi|74754421|sp|O95319.1|CELF2_HUMAN RecName: Full=CUGBP Elav-like family member 2; Short=CELF-2;
AltName: Full=Bruno-like protein 3; AltName: Full=CUG
triplet repeat RNA-binding protein 2; Short=CUG-BP2;
AltName: Full=CUG-BP- and ETR-3-like factor 2; AltName:
Full=ELAV-type RNA-binding protein 3; Short=ETR-3;
AltName: Full=Neuroblastoma apoptosis-related
RNA-binding protein; Short=hNAPOR; AltName:
Full=RNA-binding protein BRUNOL-3
gi|152013391|sp|Q5R8Y8.2|CELF2_PONAB RecName: Full=CUGBP Elav-like family member 2; Short=CELF-2;
AltName: Full=Bruno-like protein 3; AltName: Full=CUG
triplet repeat RNA-binding protein 2; Short=CUG-BP2;
AltName: Full=CUG-BP- and ETR-3-like factor 2; AltName:
Full=RNA-binding protein BRUNOL-3
gi|4249666|gb|AAD13760.1| apoptosis-related RNA binding protein [Homo sapiens]
gi|119606756|gb|EAW86350.1| CUG triplet repeat, RNA binding protein 2, isoform CRA_e [Homo
sapiens]
gi|380808896|gb|AFE76323.1| CUGBP Elav-like family member 2 isoform 3 [Macaca mulatta]
gi|380808898|gb|AFE76324.1| CUGBP Elav-like family member 2 isoform 3 [Macaca mulatta]
gi|410349367|gb|JAA41287.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
Length = 508
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 38 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 98 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 157
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 158 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 217
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 118 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 176
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 177 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 216
>gi|410963191|ref|XP_003988149.1| PREDICTED: CUGBP Elav-like family member 2 isoform 1 [Felis catus]
Length = 514
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 38 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 98 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 157
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 158 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 217
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 118 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 176
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 177 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 216
>gi|348575367|ref|XP_003473461.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 4 [Cavia
porcellus]
gi|354467974|ref|XP_003496442.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 4
[Cricetulus griseus]
Length = 478
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 136 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 195 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
>gi|332833593|ref|XP_003312501.1| PREDICTED: CUGBP, Elav-like family member 2 isoform 1 [Pan
troglodytes]
gi|397515222|ref|XP_003827855.1| PREDICTED: CUGBP Elav-like family member 2 isoform 1 [Pan paniscus]
gi|403278083|ref|XP_003930658.1| PREDICTED: CUGBP Elav-like family member 2 isoform 1 [Saimiri
boliviensis boliviensis]
gi|380808894|gb|AFE76322.1| CUGBP Elav-like family member 2 isoform 3 [Macaca mulatta]
Length = 514
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 38 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 98 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 157
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 158 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 217
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 118 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 176
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 177 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 216
>gi|4249668|gb|AAD13761.1| apoptosis-related RNA binding protein [Homo sapiens]
Length = 509
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 33 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 92
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 93 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 152
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 153 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 212
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 113 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 171
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 172 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 211
>gi|73949074|ref|XP_849139.1| PREDICTED: CUGBP, Elav-like family member 2 isoform 2 [Canis lupus
familiaris]
gi|338721615|ref|XP_003364409.1| PREDICTED: CUGBP, Elav-like family member 2 isoform 3 [Equus
caballus]
Length = 484
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 153 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 192
>gi|395539009|ref|XP_003771466.1| PREDICTED: CUGBP Elav-like family member 2 isoform 2 [Sarcophilus
harrisii]
Length = 478
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 136 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 195 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
>gi|426230734|ref|XP_004009417.1| PREDICTED: CUGBP Elav-like family member 5 [Ovis aries]
Length = 579
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/222 (40%), Positives = 128/222 (57%), Gaps = 17/222 (7%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E+ ++KD T +GC F+ +R A KA
Sbjct: 68 DAIKLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKA 127
Query: 73 VNACHNKKTLPGASSPLQVKYADGELE-RLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I +
Sbjct: 128 QTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDE 187
Query: 132 LQILRGSQQTS-----KGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 186
+LRG ++ GCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KE
Sbjct: 188 CTVLRGPRRARWGGWGAGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKE 247
Query: 187 RQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 228
R RR Q+ Q L PSL LP PY+ Y
Sbjct: 248 RTLRRMQQMVGQLGIL------TPSL--TLPFS---PYSAYA 278
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 95 DGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETK 153
DG + KLF+G +P+N+ E ++ LF +G I +L +L+ KGCAFL Y +
Sbjct: 62 DGTKDLDAIKLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCAR 121
Query: 154 EQALAALEAINGKHKMEGSSVPLVVKWADTE 184
+ A+ A A++ + + G + P+ VK AD+E
Sbjct: 122 DSAIKAQTALHEQKTLPGMARPIQVKPADSE 152
>gi|410225364|gb|JAA09901.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
gi|410263770|gb|JAA19851.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
gi|410263772|gb|JAA19852.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
gi|410305936|gb|JAA31568.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
gi|410349365|gb|JAA41286.1| CUGBP, Elav-like family member 2 [Pan troglodytes]
Length = 519
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 45 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 104
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 105 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 164
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 165 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 224
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 125 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 183
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 184 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 223
>gi|449480621|ref|XP_002190740.2| PREDICTED: CUGBP Elav-like family member 2 [Taeniopygia guttata]
Length = 490
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGL-SRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 153 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 192
>gi|327272094|ref|XP_003220821.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 2 [Anolis
carolinensis]
Length = 488
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 153 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 192
>gi|338721613|ref|XP_003364408.1| PREDICTED: CUGBP, Elav-like family member 2 isoform 2 [Equus
caballus]
gi|345793484|ref|XP_857942.2| PREDICTED: CUGBP, Elav-like family member 2 isoform 3 [Canis lupus
familiaris]
Length = 514
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 38 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 98 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 157
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 158 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 217
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 118 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 176
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 177 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 216
>gi|351699026|gb|EHB01945.1| CUG-BP- and ETR-3-like factor 1 [Heterocephalus glaber]
Length = 483
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 120/183 (65%), Gaps = 4/183 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCC V +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCSVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ + +E ++ +FS +G
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISEKCTENDIRVMFSSFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEEYRILRGPDGLSRGCAFVTFTTRGMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKE 193
Query: 189 ARR 191
+R
Sbjct: 194 QKR 196
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 70/136 (51%), Gaps = 5/136 (3%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + + TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISEKCTENDIRVMFSSFGQIEEYRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++ ++S
Sbjct: 153 VTFTTRGMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM---ARQLQQQMQQIS 209
Query: 121 ALFSIYGTIKDLQILR 136
A S++G + L LR
Sbjct: 210 AA-SVWGNLAGLNTLR 224
>gi|156717754|ref|NP_001096417.1| CUGBP Elav-like family member 2 [Xenopus (Silurana) tropicalis]
gi|152013392|sp|A4IIM2.1|CELF2_XENTR RecName: Full=CUGBP Elav-like family member 2; Short=CELF-2;
AltName: Full=Bruno-like protein 3; AltName: Full=CUG
triplet repeat RNA-binding protein 2; Short=CUG-BP2;
AltName: Full=CUG-BP- and ETR-3-like factor 2; AltName:
Full=ELAV-type RNA-binding protein 3; Short=ETR-3;
AltName: Full=RNA-binding protein BRUNOL-3
gi|134024252|gb|AAI36077.1| LOC100125022 protein [Xenopus (Silurana) tropicalis]
Length = 513
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 33 DAIKMFVGQIPRSWSEKELKDLFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 92
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 93 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 152
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 153 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 212
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 113 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 171
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 172 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 211
>gi|291401988|ref|XP_002717491.1| PREDICTED: CUG triplet repeat, RNA binding protein 2-like
[Oryctolagus cuniculus]
Length = 532
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 136 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 195 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
>gi|159032031|ref|NP_001103698.1| CUGBP Elav-like family member 2 isoform 1 [Mus musculus]
gi|237757271|ref|NP_001153765.1| CUGBP Elav-like family member 2 isoform 1 [Mus musculus]
gi|285026421|ref|NP_001077055.2| CUGBP Elav-like family member 2 isoform 2 [Rattus norvegicus]
gi|148676041|gb|EDL07988.1| CUG triplet repeat, RNA binding protein 2 [Mus musculus]
gi|149021034|gb|EDL78641.1| CUG triplet repeat, RNA binding protein 2, isoform CRA_a [Rattus
norvegicus]
gi|149021035|gb|EDL78642.1| CUG triplet repeat, RNA binding protein 2, isoform CRA_a [Rattus
norvegicus]
Length = 526
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 136 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 195 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
>gi|134152696|ref|NP_058893.2| CUGBP Elav-like family member 2 isoform 1 [Rattus norvegicus]
gi|3451291|emb|CAA09103.1| ETR-R3b protein [Rattus norvegicus]
Length = 532
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 136 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 195 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
>gi|348575365|ref|XP_003473460.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 3 [Cavia
porcellus]
Length = 532
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 136 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 195 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
>gi|326911121|ref|XP_003201910.1| PREDICTED: CUGBP Elav-like family member 2-like [Meleagris
gallopavo]
Length = 526
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 136 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 195 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
>gi|395539007|ref|XP_003771465.1| PREDICTED: CUGBP Elav-like family member 2 isoform 1 [Sarcophilus
harrisii]
Length = 526
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 136 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 195 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
>gi|395539011|ref|XP_003771467.1| PREDICTED: CUGBP Elav-like family member 2 isoform 3 [Sarcophilus
harrisii]
Length = 536
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 136 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 195 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
>gi|348575361|ref|XP_003473458.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 1 [Cavia
porcellus]
Length = 526
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 136 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 195 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
>gi|410918518|ref|XP_003972732.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 2 [Takifugu
rubripes]
Length = 474
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 139/229 (60%), Gaps = 6/229 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++NI++D++ S+GCCFV +R+ A
Sbjct: 46 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAAL 105
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 106 EAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQ 165
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 166 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 225
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGL 237
RR Q+ +Q N+ + SL G G P Y QA+ S L
Sbjct: 226 QRRLQQQLAQQMQQLNSATTWGSLTGL--GGLTPQYLALLQQAASSGNL 272
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 126 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQIEECRILRGPDG-LSRGCAF 184
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 185 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 224
>gi|83315537|ref|XP_730836.1| ribonucleoprotein [Plasmodium yoelii yoelii 17XNL]
gi|23490683|gb|EAA22401.1| ribonucleoprotein homolog F21B7.26 - Arabidopsis thaliana, putative
[Plasmodium yoelii yoelii]
Length = 440
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 122/188 (64%), Gaps = 12/188 (6%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLF+G+VPK+ E QL +F+EF +V+EV II+DK T + FV S EAD A+
Sbjct: 15 IKLFIGRVPKNYEEEQLRPIFEEFGIVNEVVIIRDKITNIHKSSAFVKMASISEADNAIR 74
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL-----------EHKLFIGMLPKNVSEAEVSALF 123
+ +N++TL LQVKYA GE+ +L + KLFIG LPKN++E + +F
Sbjct: 75 SLNNQRTLDQQLGSLQVKYASGEVMKLGFPQNVESGVDQAKLFIGSLPKNITEESIKDMF 134
Query: 124 SIYGTIKDLQILR-GSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
S+YG+++++ I++ S KGC+F+K+ KEQAL A+ ++NGK +EG + P+ V++A+
Sbjct: 135 SVYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAISSLNGKKTLEGCNRPVEVRFAE 194
Query: 183 TEKERQAR 190
+ +QA+
Sbjct: 195 PKSSKQAQ 202
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 58/87 (66%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
+S ++ KLF+G +PK++TE + MF + V+EV I+KD +T +GC FV +++
Sbjct: 108 ESGVDQAKLFIGSLPKNITEESIKDMFSVYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQ 167
Query: 69 ADKAVNACHNKKTLPGASSPLQVKYAD 95
A A+++ + KKTL G + P++V++A+
Sbjct: 168 ALYAISSLNGKKTLEGCNRPVEVRFAE 194
>gi|354467970|ref|XP_003496440.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 2
[Cricetulus griseus]
Length = 526
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 136 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 195 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
>gi|354467972|ref|XP_003496441.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 3
[Cricetulus griseus]
Length = 532
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 136 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 195 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
>gi|327272098|ref|XP_003220823.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 4 [Anolis
carolinensis]
Length = 536
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 136 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 195 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
>gi|395539013|ref|XP_003771468.1| PREDICTED: CUGBP Elav-like family member 2 isoform 4 [Sarcophilus
harrisii]
Length = 540
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 136 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 195 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
>gi|285002208|ref|NP_001165444.1| CUG triplet repeat, RNA binding protein 2-b [Xenopus laevis]
gi|1568645|gb|AAB09041.1| Etr-3 [Xenopus laevis]
Length = 538
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKDLFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 136 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 195 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
>gi|197100912|ref|NP_001126925.1| CUGBP Elav-like family member 2 isoform 2 [Pongo abelii]
gi|55733179|emb|CAH93273.1| hypothetical protein [Pongo abelii]
Length = 484
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVSFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 153 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 192
>gi|148225362|ref|NP_001079593.1| CUGBP Elav-like family member 2 [Xenopus laevis]
gi|82241541|sp|Q7ZXE2.1|CELF2_XENLA RecName: Full=CUGBP Elav-like family member 2; Short=CELF-2;
AltName: Full=Bruno-like protein 3; AltName: Full=CUG
triplet repeat RNA-binding protein 2; Short=CUG-BP2;
AltName: Full=CUG-BP- and ETR-3-like factor 2; AltName:
Full=ELAV-type RNA-binding protein 3; Short=ETR-3;
AltName: Full=RNA-binding protein BRUNOL-3
gi|27924438|gb|AAH45035.1| Cugbp2-A-prov protein [Xenopus laevis]
Length = 536
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKDLFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 136 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 195 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
>gi|440904320|gb|ELR54847.1| CUGBP Elav-like family member 2, partial [Bos grunniens mutus]
Length = 519
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 20 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 79
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 80 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 139
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 140 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 199
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 100 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGL-SRGCAF 158
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 159 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 198
>gi|327272092|ref|XP_003220820.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 1 [Anolis
carolinensis]
Length = 536
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 136 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 195 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
>gi|29436780|gb|AAH49453.1| Cugbp1 protein [Danio rerio]
Length = 534
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 140/237 (59%), Gaps = 8/237 (3%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E QL +F+ + V E+N+++D++ S+GCCFV +R+ A
Sbjct: 52 DSIKMFVGQIPRTWSEDQLRELFEPYGAVYEINVLRDRSQNPPQSKGCCFVTYYTRKSAL 111
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLF+GM+ K +E ++ +FS YG
Sbjct: 112 EAQNALHNMKILPGMHHPIQMKPADSEKNNAVEDRKLFVGMISKKCNENDIRLMFSPYGQ 171
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+ CAF+ + ++ A +A+++++ MEG S P+VVK+ADT+K+++
Sbjct: 172 IEECRILRGPDGLSR-CAFVTFTARQMAQSAIKSMHQSQTMEGCSSPIVVKFADTQKDKE 230
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPM 245
+R + Q NA S +L G +G P Y Q S S G L PM
Sbjct: 231 QKRIAQQLQQQMQQLNAASMWGNLTGLNSLG--PQYLAL-LQQSASSGNALNNLHPM 284
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 6/107 (5%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGC 58
M + EK ++ E KLFVG + K E + MF + ++E I++ D +R C
Sbjct: 132 MKPADSEKNNAVEDRKLFVGMISKKCNENDIRLMFSPYGQIEECRILRGPDGLSR----C 187
Query: 59 CFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
FV +RQ A A+ + H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 188 AFVTFTARQMAQSAIKSMHQSQTMEGCSSPIVVKFADTQKDKEQKRI 234
>gi|327272096|ref|XP_003220822.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 3 [Anolis
carolinensis]
Length = 487
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 136 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 195 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
>gi|312068271|ref|XP_003137136.1| hypothetical protein LOAG_01549 [Loa loa]
gi|307767708|gb|EFO26942.1| hypothetical protein LOAG_01549 [Loa loa]
Length = 528
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 118/180 (65%), Gaps = 1/180 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ EA+ +F++F V ++N+++DK T+ASRGCCFV R +A A
Sbjct: 20 DAIKMFVGQIPRSWGEAECRELFEQFGSVCQLNVLRDKVTQASRGCCFVTYYKRADAIAA 79
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A HN + LP P+Q+K AD E R E KLF+GML K ++E V +F+ +G I+D
Sbjct: 80 QAALHNIRVLPQMYHPVQMKPADIE-NRNERKLFVGMLNKKLTEDSVREMFAQFGHIEDC 138
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+L+ S+ S+GCAF+ + + A A+ ++ MEG S P+VVK+ADT+KE+ A+++
Sbjct: 139 TVLKDSEGKSRGCAFVTFAHRSCAQQAIRQVHLSQTMEGCSKPIVVKFADTQKEKDAKKS 198
>gi|82541152|ref|XP_724838.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23479626|gb|EAA16403.1| FCA gamma-related [Plasmodium yoelii yoelii]
Length = 387
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 122/188 (64%), Gaps = 12/188 (6%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLF+G+VPK+ E QL +F+EF +V+EV II+DK T + FV S EAD A+
Sbjct: 86 IKLFIGRVPKNYEEEQLRPIFEEFGIVNEVVIIRDKITNIHKSSAFVKMASISEADNAIR 145
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL-----------EHKLFIGMLPKNVSEAEVSALF 123
+ +N++TL LQVKYA GE+ +L + KLFIG LPKN++E + +F
Sbjct: 146 SLNNQRTLDQQLGSLQVKYASGEVMKLGFPQNVESGVDQAKLFIGSLPKNITEESIKDMF 205
Query: 124 SIYGTIKDLQILR-GSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
S+YG+++++ I++ S KGC+F+K+ KEQAL A+ ++NGK +EG + P+ V++A+
Sbjct: 206 SVYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAISSLNGKKTLEGCNRPVEVRFAE 265
Query: 183 TEKERQAR 190
+ +QA+
Sbjct: 266 PKSSKQAQ 273
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 58/87 (66%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
+S ++ KLF+G +PK++TE + MF + V+EV I+KD +T +GC FV +++
Sbjct: 179 ESGVDQAKLFIGSLPKNITEESIKDMFSVYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQ 238
Query: 69 ADKAVNACHNKKTLPGASSPLQVKYAD 95
A A+++ + KKTL G + P++V++A+
Sbjct: 239 ALYAISSLNGKKTLEGCNRPVEVRFAE 265
>gi|345485141|ref|XP_001605146.2| PREDICTED: CUGBP Elav-like family member 2 [Nasonia vitripennis]
Length = 733
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 125/197 (63%), Gaps = 4/197 (2%)
Query: 8 KKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQ 67
+K + +K+FVGQVPK + E L +F+EF V ++N+++DK T +S+GCC + SR+
Sbjct: 194 EKPDPDNIKMFVGQVPKDLDENDLRTIFEEFGRVHQINVLRDKYTGSSKGCCAAMDYSRR 253
Query: 68 EA--DKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSI 125
A K A + +T P+Q+K AD E R KLF+GML K +E +V +F +
Sbjct: 254 LALDTKRARAPESVRTFNQKLHPIQMKPADSE-NRSHRKLFVGMLSKKFTENDVRNMFDV 312
Query: 126 YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
YG I++ +LR + Q SKGCAF+ + +K+ A+ A++A++ MEG S PLVVK+ADT+K
Sbjct: 313 YGEIEECSVLRENGQ-SKGCAFVTFASKQSAVLAIKALHHSQTMEGCSSPLVVKFADTQK 371
Query: 186 ERQARRAQKAQSQANNL 202
++ +R Q+ Q+ N+
Sbjct: 372 DKDQKRLQQMQANLWNI 388
>gi|45383614|ref|NP_989591.1| CUGBP Elav-like family member 2 [Gallus gallus]
gi|31747199|gb|AAP57761.1| ELAV-type RNA-binding protein 3 variant 4 [Gallus gallus]
Length = 488
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 119/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKTFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 153 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 192
>gi|440800622|gb|ELR21658.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 229
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 78/169 (46%), Positives = 119/169 (70%), Gaps = 5/169 (2%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVGQVPK++ EA + + F + + +NI++D+ T+ S+GC FV +++ ADKA++A
Sbjct: 13 KLFVGQVPKNVQEATIRSFFSPYGEIVHMNILRDRFTQISKGCGFVSYSTKEAADKAISA 72
Query: 76 CHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
H+ T+P ++PLQV+YAD EL+++ EHKLFIG LP V+E + +F+ YG I+ L I
Sbjct: 73 LHSVVTIPPHTAPLQVRYADEELQQMAEHKLFIGKLPTTVTEELLRQIFAPYGNIEKLNI 132
Query: 135 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADT 183
L+G + C F+KY+ +E+A A+ A+NG K+ GS+ PLVVK+ADT
Sbjct: 133 LKGPADVN--CGFVKYDNREEAEKAIRALNG--KVVGSNEPLVVKYADT 177
>gi|410918520|ref|XP_003972733.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 3 [Takifugu
rubripes]
Length = 501
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 131/206 (63%), Gaps = 4/206 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++NI++D++ S+GCCFV +R+ A
Sbjct: 46 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAAL 105
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 106 EAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQ 165
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 166 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 225
Query: 189 ARRAQKAQSQANNLPNADSQHPSLFG 214
RR Q+ +Q N+ + SL G
Sbjct: 226 QRRLQQQLAQQMQQLNSATTWGSLTG 251
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 126 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQIEECRILRGPDG-LSRGCAF 184
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 185 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 224
>gi|152013390|sp|Q7T2T1.2|CELF2_CHICK RecName: Full=CUGBP Elav-like family member 2; Short=CELF-2;
AltName: Full=Bruno-like protein 3; AltName: Full=CUG
triplet repeat RNA-binding protein 2; Short=CUG-BP2;
AltName: Full=CUG-BP- and ETR-3-like factor 2; AltName:
Full=ELAV-type RNA-binding protein 3; Short=ETR-3;
AltName: Full=RNA-binding protein BRUNOL-3
gi|31747201|gb|AAP57762.1| ELAV-type RNA-binding protein 3 variant L [Gallus gallus]
Length = 484
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 119/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKTFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 133
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 134 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 193
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 153 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 192
>gi|297300473|ref|XP_002805600.1| PREDICTED: CUGBP Elav-like family member 2-like [Macaca mulatta]
Length = 501
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 38 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 98 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 157
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 158 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 217
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 118 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 176
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 177 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 216
>gi|221057576|ref|XP_002261296.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|194247301|emb|CAQ40701.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 512
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 83/206 (40%), Positives = 127/206 (61%), Gaps = 12/206 (5%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLF+G+VPK+M E Q+ +F+EF +V EV II+DK T + FV S EAD A+
Sbjct: 87 IKLFIGRVPKNMEEEQVRPIFEEFGIVKEVVIIRDKITNIHKSSAFVKMASISEADNAIR 146
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL-----------EHKLFIGMLPKNVSEAEVSALF 123
+ +N++TL LQVKYA GE+ +L + KLFIG LPK++SE V +F
Sbjct: 147 SLNNQRTLDPQLGSLQVKYASGEIMKLGFPQNIESGVDQAKLFIGSLPKSISEESVKEMF 206
Query: 124 SIYGTIKDLQILR-GSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
S YG+++++ I++ S KGC+F+K+ KEQAL A+ ++NGK +EG + P+ V++A+
Sbjct: 207 SPYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAINSLNGKKTLEGCARPVEVRFAE 266
Query: 183 TEKERQARRAQKAQSQANNLPNADSQ 208
+ +QA+ QS N+ SQ
Sbjct: 267 PKSAKQAQIPMNMQSMQNSAHGISSQ 292
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 57/87 (65%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
+S ++ KLF+G +PK ++E + MF + V+EV I+KD +T +GC FV +++
Sbjct: 180 ESGVDQAKLFIGSLPKSISEESVKEMFSPYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQ 239
Query: 69 ADKAVNACHNKKTLPGASSPLQVKYAD 95
A A+N+ + KKTL G + P++V++A+
Sbjct: 240 ALYAINSLNGKKTLEGCARPVEVRFAE 266
>gi|393911007|gb|EJD76121.1| hypothetical protein, variant [Loa loa]
Length = 480
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 118/180 (65%), Gaps = 1/180 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ EA+ +F++F V ++N+++DK T+ASRGCCFV R +A A
Sbjct: 20 DAIKMFVGQIPRSWGEAECRELFEQFGSVCQLNVLRDKVTQASRGCCFVTYYKRADAIAA 79
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A HN + LP P+Q+K AD E R E KLF+GML K ++E V +F+ +G I+D
Sbjct: 80 QAALHNIRVLPQMYHPVQMKPADIE-NRNERKLFVGMLNKKLTEDSVREMFAQFGHIEDC 138
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+L+ S+ S+GCAF+ + + A A+ ++ MEG S P+VVK+ADT+KE+ A+++
Sbjct: 139 TVLKDSEGKSRGCAFVTFAHRSCAQQAIRQVHLSQTMEGCSKPIVVKFADTQKEKDAKKS 198
>gi|13537210|dbj|BAB40781.1| HrETR-1 [Halocynthia roretzi]
Length = 594
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 118/190 (62%)
Query: 5 KKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICP 64
K+ + ++ VKLF+GQVPK+ TE +L +F+ + + E++++ DK T +GC F+
Sbjct: 93 KEFQDKDDDAVKLFIGQVPKNWTEHELRPIFEPYGEIYELSVLHDKYTGMHKGCAFLTYC 152
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFS 124
+ A A N H +KTLPG + P+QVK AD + + KLF+GML K +E ++ LF
Sbjct: 153 KKTPAINAQNFLHEQKTLPGMNHPMQVKPADTVNKGEDRKLFVGMLGKRQTEEDIRQLFE 212
Query: 125 IYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
+G I++ ILR SKGC+F+K T A AA++A++G M G+S +VVK ADT+
Sbjct: 213 KFGHIEECTILRTPDGQSKGCSFVKLSTSTGARAAIDALHGSQTMPGASSSIVVKLADTD 272
Query: 185 KERQARRAQK 194
KER R+ Q+
Sbjct: 273 KERAIRKMQQ 282
>gi|345310083|ref|XP_001515840.2| PREDICTED: CUGBP, Elav-like family member 2 [Ornithorhynchus
anatinus]
Length = 426
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 235
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 136 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 194
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 195 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 234
>gi|55730095|emb|CAH91772.1| hypothetical protein [Pongo abelii]
Length = 519
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 119/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 38 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 98 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 157
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 158 IEECRILRGPDGLSRGCAFVTSSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 217
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 118 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 176
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 177 VTSSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 216
>gi|440792905|gb|ELR14112.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 458
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 112/188 (59%), Gaps = 20/188 (10%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLF+GQ+PK MTE + +F F + EV II+++ T SRGC FV + A+ A+
Sbjct: 104 VKLFIGQLPKSMTEPYIGPLFAPFGNLVEVAIIRNRATGESRGCAFVTYDNADSAELAIE 163
Query: 75 ACHNKKTLPGASSPLQVKYAD---GELER-----------------LEHKLFIGMLPKNV 114
HNK+TLPG +SP+QVKYA G+ R E KLFIGMLP+ V
Sbjct: 164 TLHNKQTLPGMTSPIQVKYAHGGGGDAPRYTPAPVPDYGMPGMDNMTEFKLFIGMLPRTV 223
Query: 115 SEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSV 174
E + A+F YG+I ++ +LR +S+GCAF+KY +E A+ A+ A NG+ +G +
Sbjct: 224 GEDGLRAIFQPYGSIIEVVVLREPDGSSRGCAFVKYHRREDAVNAINACNGQMFFQGQTN 283
Query: 175 PLVVKWAD 182
PL VK+AD
Sbjct: 284 PLTVKFAD 291
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLF+G +P+ + E L A+F+ + + EV ++++ +SRGC FV R++A A+NA
Sbjct: 213 KLFIGMLPRTVGEDGLRAIFQPYGSIIEVVVLREPDG-SSRGCAFVKYHRREDAVNAINA 271
Query: 76 CHNKKTLPGASSPLQVKYADG 96
C+ + G ++PL VK+ADG
Sbjct: 272 CNGQMFFQGQTNPLTVKFADG 292
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 76
LF+ +P H + LL +F F + V + DK T S+G FV S AD A A
Sbjct: 377 LFIYHLPTHYGDGDLLTLFSPFGQILSVKVFLDKMTMVSKGFGFV---SYASADSARLAI 433
Query: 77 HNKKTLPGASSPLQVK 92
N L L+V+
Sbjct: 434 ENMDGLQVGEKRLKVQ 449
>gi|341896837|gb|EGT52772.1| CBN-ETR-1 protein [Caenorhabditis brenneri]
Length = 585
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 112/178 (62%), Gaps = 1/178 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P++ E +F+++ V NI++DK+T+AS+GCCFV R++A +A
Sbjct: 46 DTIKMFVGQIPRNWNEVDCRRLFEQYGPVFSCNILRDKSTQASKGCCFVTFFHRKDAIEA 105
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A HN K + G P+Q+K AD E R E KLFIG L K +E + +FS YG I+D
Sbjct: 106 QGALHNIKVIEGMHHPVQMKPADTE-NRNERKLFIGQLSKKHNEENLREIFSKYGQIEDC 164
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+LR S+GCAF+ + + A+ A + ++ MEG S PLVVK+ADT+K++ +
Sbjct: 165 SVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFADTQKDKDVK 222
>gi|388511171|gb|AFK43647.1| unknown [Medicago truncatula]
Length = 218
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/118 (66%), Positives = 94/118 (79%), Gaps = 5/118 (4%)
Query: 216 LPMGYAPPYNGYGYQASGSYGLMQYRLPP-MQNQPGFHGIIPPVNQGNAMRGASPDLSSN 274
+PMGY PPYNGYGYQA GSYGLM YR+PP MQNQPG+H ++P +NQGNA+R PDL N
Sbjct: 1 MPMGYVPPYNGYGYQAPGSYGLMPYRMPPPMQNQPGYHNMMPHMNQGNALR---PDLGPN 57
Query: 275 MGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPST 332
M PRNY +PP+ +VGS YPAVPGLQ+PM YPGGM+ RPLN+ PGSV P+ N N +T
Sbjct: 58 MNPRNYHVPPASYVGS-YPAVPGLQHPMAYPGGMISPRPLNSPPGSVLPSGGNGNSAT 114
>gi|402592937|gb|EJW86864.1| ELAV-type RNA binding protein variant B [Wuchereria bancrofti]
Length = 509
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 123/195 (63%), Gaps = 1/195 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ EA+ +F++F V ++N+++DK T+ SRGCCFV R +A A
Sbjct: 20 DAIKMFVGQIPRSWGEAECRELFEQFGSVCQLNVLRDKVTQTSRGCCFVTYYKRADAIAA 79
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A HN + LP P+Q+K AD E R E KLF+GML K ++E +V +F+ +G I+D
Sbjct: 80 QAALHNIRVLPQMYHPVQMKPADIE-NRNERKLFVGMLNKKLTEDDVREMFAQFGHIEDC 138
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+L+ S+ S+GCAF+ + + A A++ ++ MEG S P+VVK+ADT+KE+ A++
Sbjct: 139 TVLKDSEGKSRGCAFVTFAHRSCAQQAIKQVHLSQTMEGCSKPIVVKFADTQKEKDAKKI 198
Query: 193 QKAQSQANNLPNADS 207
Q PN+ +
Sbjct: 199 CLLQLLQTAQPNSST 213
>gi|326426729|gb|EGD72299.1| napor protein short isoform [Salpingoeca sp. ATCC 50818]
Length = 353
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 108/174 (62%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
E+ +KLFVGQ+PK E QL A+ + + + ++ I+K+K T SRGC FV SRQ A
Sbjct: 19 DEDAIKLFVGQLPKSYGEEQLTALLQPYGAIHDMMILKNKMTGESRGCAFVTFCSRQSAL 78
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
A+ H K+TLP ++P+QVK AD E + KLF+GM+ K +EA++ A+F +G I+
Sbjct: 79 SAIADLHEKRTLPTMANPMQVKIADSEQRGDDRKLFVGMISKTCTEADLEAMFRPFGEIE 138
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
+ +L G + SKGCAF+KY A A+ ++ MEG P+VVK ADTE
Sbjct: 139 SVNVLIGPEGQSKGCAFVKYTNAGSANQAIAKLHNSTTMEGCRAPMVVKIADTE 192
>gi|228480217|ref|NP_001153184.1| CUGBP Elav-like family member 2 isoform 1 [Pongo abelii]
gi|55733625|emb|CAH93489.1| hypothetical protein [Pongo abelii]
Length = 514
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 119/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++++++D++ S+GCCFV +R+ A
Sbjct: 38 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQIDVLRDRSQNPPQSKGCCFVTFYTRKAAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 98 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 157
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 158 IEECWILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 217
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 118 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECWILRGPDG-LSRGCAF 176
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 177 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 216
>gi|440906742|gb|ELR56971.1| CUGBP Elav-like family member 3, partial [Bos grunniens mutus]
Length = 476
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 120/199 (60%), Gaps = 13/199 (6%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 6 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 65
Query: 73 VNACHNKKTLPGASSPLQVKYAD-----------GELERLEHKLFIGMLPKNVSEAEVSA 121
+A H +KTLPG + P+QVK AD G++ + KLF+GML K ++ +V
Sbjct: 66 QSALHEQKTLPGMNRPIQVKPADSESRGGRFCTFGKVGMKDRKLFVGMLGKQQTDEDVRK 125
Query: 122 LFSIYGTIKDLQILRGSQQ--TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVK 179
+F +GTI + L S S GCAF+K++T +A AA+ ++ + G+S LVVK
Sbjct: 126 MFEPFGTIDEWWALTPSSSLLNSSGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVK 185
Query: 180 WADTEKERQARRAQKAQSQ 198
+ADTEKER RR Q+ +Q
Sbjct: 186 FADTEKERGLRRMQQVATQ 204
>gi|345802740|ref|XP_003434959.1| PREDICTED: CUGBP, Elav-like family member 4 [Canis lupus
familiaris]
Length = 448
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 111/188 (59%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F SR
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCRFSTYCSRPSNL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
+ H + +LPG + P+QVK AD E + KLF+GML SE +V L I+
Sbjct: 110 RDRGTRHGEGSLPGMNRPIQVKPADSESRGEDRKLFVGMLNTQQSEDDVRRLVKALRNIE 169
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 170 ECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 229
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 230 RMQQMAGQ 237
>gi|426241648|ref|XP_004014701.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member 2
[Ovis aries]
Length = 551
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 119/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 88 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 147
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 148 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 207
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILR S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 208 IEECRILREPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 267
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I+++ SRGC F
Sbjct: 168 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILREPDGL-SRGCAF 226
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 227 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 266
>gi|55729085|emb|CAH91279.1| hypothetical protein [Pongo abelii]
Length = 360
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 119/180 (66%), Gaps = 4/180 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 38 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 97
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 98 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 157
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
I++ +ILRG S+GCAF+ + T+ A A++A++ MEG S +VVK+ADT+K+++
Sbjct: 158 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSSIVVKFADTQKDKE 217
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 118 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 176
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SS + VK+AD + ++
Sbjct: 177 VTFSTRAMAQNAIKAMHQSQTMEGCSSSIVVKFADTQKDK 216
>gi|193204852|ref|NP_001122631.1| Protein ETR-1, isoform f [Caenorhabditis elegans]
gi|351063347|emb|CCD71502.1| Protein ETR-1, isoform f [Caenorhabditis elegans]
Length = 588
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 111/178 (62%), Gaps = 1/178 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ E +F+++ V NI++DK+T+AS+GCCFV R++A +A
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEA 112
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A HN K + G P+Q+K AD E R E KLFIG L K +E + +F+ +G I+D
Sbjct: 113 QGALHNIKVIEGMHHPVQMKPADTE-NRNERKLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+LR S+GCAF+ + + A+ A + ++ MEG S PLVVK+ADT+K++ +
Sbjct: 172 SVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFADTQKDKDVK 229
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Query: 79 KKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG- 137
K T P ++ V + E + K+F+G +P+ +E + LF YG++ ILR
Sbjct: 31 KDTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDK 90
Query: 138 SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
S Q SKGC F+ + ++ A+ A A++ +EG P+ +K ADTE + +
Sbjct: 91 STQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNERK 143
>gi|193204850|ref|NP_001122630.1| Protein ETR-1, isoform e [Caenorhabditis elegans]
gi|351063346|emb|CCD71501.1| Protein ETR-1, isoform e [Caenorhabditis elegans]
Length = 586
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 111/178 (62%), Gaps = 1/178 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ E +F+++ V NI++DK+T+AS+GCCFV R++A +A
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEA 112
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A HN K + G P+Q+K AD E R E KLFIG L K +E + +F+ +G I+D
Sbjct: 113 QGALHNIKVIEGMHHPVQMKPADTE-NRNERKLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+LR S+GCAF+ + + A+ A + ++ MEG S PLVVK+ADT+K++ +
Sbjct: 172 SVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFADTQKDKDVK 229
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Query: 79 KKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG- 137
K T P ++ V + E + K+F+G +P+ +E + LF YG++ ILR
Sbjct: 31 KDTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDK 90
Query: 138 SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
S Q SKGC F+ + ++ A+ A A++ +EG P+ +K ADTE + +
Sbjct: 91 STQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNERK 143
>gi|444516747|gb|ELV11280.1| Poly [ADP-ribose] polymerase 6 [Tupaia chinensis]
Length = 972
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 124/213 (58%), Gaps = 12/213 (5%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG S P+QVK A E + KLF+GML K E +V LF +G I++
Sbjct: 65 QSALHEQKTLPGMSRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGQIQEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR TS+GCAF+K+ ++ + AL+ ++G M G+S LVVK ADT++ER RR
Sbjct: 125 TVLRSPDGTSRGCAFVKFGSQGE---ALQGLHGSRTMAGASSSLVVKLADTDRERALRRM 181
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYN 225
Q+ Q HP+ LP+G Y
Sbjct: 182 QQMAGQLGAF------HPA---PLPLGACGAYT 205
>gi|50261759|gb|AAT72460.1| FCA gamma protein [Lolium perenne]
Length = 668
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 114/176 (64%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ +E + + +E V EV +I+DK T + CCFV + + A +A+
Sbjct: 52 VKLFVGTVPRIASEDDVRHLSEEHGDVLEVALIRDKKTGEQQECCFVKYATSEGAKRAIR 111
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P++V+YAD E ERL EHKLF+ L K + E+ +FS +G ++D
Sbjct: 112 ALHNQYTIPGAMGPVEVRYADCEKERLGSIEHKLFVASLNKQATAKEIEEIFSPFGHVED 171
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I++ + S+GC F+++ +KE AL+A+ +++G + M G PL+V++AD ++ R
Sbjct: 172 VYIMKDGTRQSRGCGFVEFSSKEPALSAVNSLSGTYIMRGCEQPLIVRFADPKRPR 227
>gi|441625924|ref|XP_003257673.2| PREDICTED: CUGBP Elav-like family member 2 isoform 1 [Nomascus
leucogenys]
Length = 523
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 120/183 (65%), Gaps = 7/183 (3%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 50 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 110 EAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 169
Query: 129 IKDLQILRGSQQTSKG---CAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
I++ +ILRG S+G CAF+ + T+ A A++A++ MEG S P+VVK+ADT+K
Sbjct: 170 IEECRILRGPDGLSRGNSSCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQK 229
Query: 186 ERQ 188
+++
Sbjct: 230 DKE 232
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGC 58
M + EK ++ E KLF+G V K E + MF F ++E I++ D +R + C
Sbjct: 130 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGNSSC 189
Query: 59 CFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
FV +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 190 AFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 231
>gi|196475703|gb|ACG76412.1| trinucleotide repeat containing 4 (predicted) [Otolemur garnettii]
Length = 564
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 119/187 (63%), Gaps = 3/187 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKME-GSSVPLVVKWADTEKERQARR 191
+LRG TSKG LK+ + +++ +++ H+ E G+S LVVK+ADTEKER RR
Sbjct: 125 TVLRGPDGTSKGLPLLKHMPLQPSIS--PSLSVCHQEERGASSSLVVKFADTEKERGLRR 182
Query: 192 AQKAQSQ 198
Q+ +Q
Sbjct: 183 MQQVATQ 189
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ +S E KLFVG + K T+ + MF+ F +DE +++ + P +
Sbjct: 87 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGLPLLKHMPLQ 146
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+++ CH ++ GASS L VK+AD E ER
Sbjct: 147 PSISPSLSVCHQEER--GASSSLVVKFADTEKER 178
>gi|268533976|ref|XP_002632118.1| C. briggsae CBR-ETR-1 protein [Caenorhabditis briggsae]
Length = 574
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 111/178 (62%), Gaps = 1/178 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ E +F+++ V NI++DK+T+ S+GCCFV R++A +A
Sbjct: 50 DAIKMFVGQIPRQWNEVDCRRLFEQYGSVYSCNILRDKSTQTSKGCCFVTFFHRKDAIEA 109
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A HN K + G P+Q+K AD E R E KLFIG L K +E + +F+ +G I+D
Sbjct: 110 QGALHNIKVIDGMHHPVQMKPADTE-NRNERKLFIGQLSKKHNEENLREIFAKFGLIEDC 168
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+LR + S+GCAF+ + + A+ A + ++ MEG S PLVVK+ADT+K++ +
Sbjct: 169 SVLRDNDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFADTQKDKDVK 226
>gi|156101369|ref|XP_001616378.1| RNA-binding protein [Plasmodium vivax Sal-1]
gi|148805252|gb|EDL46651.1| RNA-binding protein, putative [Plasmodium vivax]
Length = 513
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 119/188 (63%), Gaps = 12/188 (6%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLF+G+VPK M E QL +F+EF +V EV II+DK T + FV S EAD A+
Sbjct: 88 IKLFIGRVPKTMEEEQLRPIFEEFGIVKEVVIIRDKITNIHKSSAFVKMASISEADNAIR 147
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL-----------EHKLFIGMLPKNVSEAEVSALF 123
+ +N++TL LQVKYA GE+ +L + KLFIG LPK+++E V +F
Sbjct: 148 SLNNQRTLDPQLGSLQVKYASGEIMKLGFPQNIESGVDQAKLFIGSLPKSITEESVKEMF 207
Query: 124 SIYGTIKDLQILR-GSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
S YG+++++ I++ S KGC+F+K+ KEQAL A+ ++NGK +EG + P+ V++A+
Sbjct: 208 SPYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAINSLNGKKTLEGCARPVEVRFAE 267
Query: 183 TEKERQAR 190
+ +Q +
Sbjct: 268 PKSAKQTQ 275
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 57/87 (65%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
+S ++ KLF+G +PK +TE + MF + V+EV I+KD +T +GC FV +++
Sbjct: 181 ESGVDQAKLFIGSLPKSITEESVKEMFSPYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQ 240
Query: 69 ADKAVNACHNKKTLPGASSPLQVKYAD 95
A A+N+ + KKTL G + P++V++A+
Sbjct: 241 ALYAINSLNGKKTLEGCARPVEVRFAE 267
>gi|17532857|ref|NP_493673.1| Protein ETR-1, isoform a [Caenorhabditis elegans]
gi|1289522|gb|AAA98566.1| elav-type ribonucleoprotein [Caenorhabditis elegans]
gi|151936111|gb|ABS18832.1| ELAV-type RNA binding protein variant A [Caenorhabditis elegans]
gi|351063336|emb|CCD71491.1| Protein ETR-1, isoform a [Caenorhabditis elegans]
Length = 584
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 111/178 (62%), Gaps = 1/178 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ E +F+++ V NI++DK+T+AS+GCCFV R++A +A
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEA 112
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A HN K + G P+Q+K AD E R E KLFIG L K +E + +F+ +G I+D
Sbjct: 113 QGALHNIKVIEGMHHPVQMKPADTE-NRNERKLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+LR S+GCAF+ + + A+ A + ++ MEG S PLVVK+ADT+K++ +
Sbjct: 172 SVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFADTQKDKDVK 229
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Query: 79 KKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG- 137
K T P ++ V + E + K+F+G +P+ +E + LF YG++ ILR
Sbjct: 31 KDTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDK 90
Query: 138 SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
S Q SKGC F+ + ++ A+ A A++ +EG P+ +K ADTE + +
Sbjct: 91 STQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNERK 143
>gi|193204854|ref|NP_001122632.1| Protein ETR-1, isoform g [Caenorhabditis elegans]
gi|151936119|gb|ABS18836.1| ELAV-type RNA binding protein variant E [Caenorhabditis elegans]
gi|351063348|emb|CCD71503.1| Protein ETR-1, isoform g [Caenorhabditis elegans]
Length = 513
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 111/178 (62%), Gaps = 1/178 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ E +F+++ V NI++DK+T+AS+GCCFV R++A +A
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEA 112
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A HN K + G P+Q+K AD E R E KLFIG L K +E + +F+ +G I+D
Sbjct: 113 QGALHNIKVIEGMHHPVQMKPADTE-NRNERKLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+LR S+GCAF+ + + A+ A + ++ MEG S PLVVK+ADT+K++ +
Sbjct: 172 SVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFADTQKDKDVK 229
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Query: 79 KKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG- 137
K T P ++ V + E + K+F+G +P+ +E + LF YG++ ILR
Sbjct: 31 KDTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDK 90
Query: 138 SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
S Q SKGC F+ + ++ A+ A A++ +EG P+ +K ADTE + +
Sbjct: 91 STQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNERK 143
>gi|328873245|gb|EGG21612.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 370
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 115/180 (63%), Gaps = 4/180 (2%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
K+FVG +P M E +L +F +F + ++IIKDK T RGC F+ +++EAD A+N
Sbjct: 15 KVFVGHIPLTMKEDELSEIFDKFGSILNISIIKDKKTSVPRGCAFISYGTKEEADNAINT 74
Query: 76 CHNKKTLPG-ASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
+ G + PLQVKY+D E+E++E KLF+GML + +E ++ LFS YG I+D+ I
Sbjct: 75 MNATNQYIGDMNKPLQVKYSDNEIEKMERKLFVGMLGTS-NEDQIKQLFSKYGNIEDINI 133
Query: 135 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
+R KG F+K+ +E+A A+ ++ K + GS++P++VK+ADT ERQ R+ Q+
Sbjct: 134 VREPDGKPKGYGFVKFSMREEAEEAIRDMDSKQTLPGSTLPIIVKFADT--ERQKRKKQQ 191
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 103 HKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGC-AFLKYETKEQALAALE 161
+ LFI LP + +AE+ LF YG + ++ C F+ Y+ + A+ A+
Sbjct: 290 NDLFIYYLPASYGDAELKNLFQQYGNVVSAKVFIDKNTGQSKCFGFVSYDRSQSAIQAIN 349
Query: 162 AINGKHKMEGSSVPLVVK 179
+NG H +EG + + K
Sbjct: 350 NLNGFH-VEGKKLKVNFK 366
>gi|410052930|ref|XP_003953367.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member 5
[Pan troglodytes]
Length = 484
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 120/215 (55%), Gaps = 11/215 (5%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E ++KD T +GC + +R A K
Sbjct: 43 DAIKLFVGQIPRHLDEKDLKPLFEQFGRIHENAVLKDPYTGMHKGCLPALYCARDSASKL 102
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A H +KTL G + L+ + + KLF+GML K SE +V LF +G I +
Sbjct: 103 KVAVHEQKTLSGVNRVLRCRPGWSAFRGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDEC 162
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG +SKGCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 163 TVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 222
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGY 227
Q+ Q L PSL LP PY+ Y
Sbjct: 223 QQMVGQLGIL------TPSL--TLPFS---PYSAY 246
>gi|151936115|gb|ABS18834.1| ELAV-type RNA binding protein variant C [Caenorhabditis elegans]
Length = 378
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 111/178 (62%), Gaps = 1/178 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ E +F+++ V NI++DK+T+AS+GCCFV R++A +A
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEA 112
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A HN K + G P+Q+K AD E R E KLFIG L K +E + +F+ +G I+D
Sbjct: 113 QGALHNIKVIEGMHHPVQMKPADTE-NRNERKLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+LR S+GCAF+ + + A+ A + ++ MEG S PLVVK+ADT+K++ +
Sbjct: 172 SVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFADTQKDKDVK 229
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Query: 79 KKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG- 137
K T P ++ V + E + K+F+G +P+ +E + LF YG++ ILR
Sbjct: 31 KDTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDK 90
Query: 138 SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
S Q SKGC F+ + ++ A+ A A++ +EG P+ +K ADTE + +
Sbjct: 91 STQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNERK 143
>gi|146386739|pdb|2DHS|A Chain A, Solution Structure Of Nucleic Acid Binding Protein
Cugbp1ab And Its Binding Study With Dna And Rna
Length = 187
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 112/172 (65%), Gaps = 4/172 (2%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEADKA 72
+K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A +A
Sbjct: 16 IKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEA 75
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G I+
Sbjct: 76 QNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIE 135
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
+ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+AD
Sbjct: 136 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFAD 187
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYAD 95
V +R A A+ A H +T+ G SSP+ VK+AD
Sbjct: 153 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFAD 187
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAAL 160
K+F+G +P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AL A
Sbjct: 17 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 76
Query: 161 EAINGKHKMEGSSVPLVVKWADTEK 185
A++ + G P+ +K AD+EK
Sbjct: 77 NALHNMKVLPGMHHPIQMKPADSEK 101
>gi|389584459|dbj|GAB67191.1| RNA-binding protein [Plasmodium cynomolgi strain B]
Length = 567
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 119/188 (63%), Gaps = 12/188 (6%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLF+G+VPK M E Q+ +F+EF +V EV II+DK T + FV S EAD A+
Sbjct: 88 IKLFIGRVPKSMEEEQVRPIFEEFGIVKEVVIIRDKITNIHKSSAFVKMASISEADNAIR 147
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL-----------EHKLFIGMLPKNVSEAEVSALF 123
+ +N++TL LQVKYA GE+ +L + KLFIG LPK+++E V +F
Sbjct: 148 SLNNQRTLDPQLGSLQVKYASGEIMKLGFPQNIESGVDQAKLFIGSLPKSITEESVKEMF 207
Query: 124 SIYGTIKDLQILR-GSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
S YG+++++ I++ S KGC+F+K+ KEQAL A+ ++NGK +EG + P+ V++A+
Sbjct: 208 SPYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAINSLNGKKTLEGCARPVEVRFAE 267
Query: 183 TEKERQAR 190
+ +Q +
Sbjct: 268 PKSAKQTQ 275
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 57/87 (65%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
+S ++ KLF+G +PK +TE + MF + V+EV I+KD +T +GC FV +++
Sbjct: 181 ESGVDQAKLFIGSLPKSITEESVKEMFSPYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQ 240
Query: 69 ADKAVNACHNKKTLPGASSPLQVKYAD 95
A A+N+ + KKTL G + P++V++A+
Sbjct: 241 ALYAINSLNGKKTLEGCARPVEVRFAE 267
>gi|32482055|gb|AAP84374.1| FCA-A1 [Triticum aestivum]
Length = 602
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 107/157 (68%), Gaps = 3/157 (1%)
Query: 34 MFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY 93
+F++ V EV +I+D+ T +GCCFV + +EA++A+ A HN+ T+PGA P+QV+Y
Sbjct: 4 LFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIRALHNQCTIPGAMGPVQVRY 63
Query: 94 ADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKY 150
ADGE ER +EHKLF+ L K + E+ +F+ +G ++D+ I++ + S+GC F+K+
Sbjct: 64 ADGEKERHGSIEHKLFVASLNKQATAKEIEEIFAPFGHVEDVYIMKDGMRQSRGCGFVKF 123
Query: 151 ETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+KE ALAA+ +++G + M G PL+V++AD ++ R
Sbjct: 124 SSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 160
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 2 AESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFV 61
A+ +KE+ S E KLFV + K T ++ +F F V++V I+KD R SRGC FV
Sbjct: 64 ADGEKERHGSIEH-KLFVASLNKQATAKEIEEIFAPFGHVEDVYIMKDG-MRQSRGCGFV 121
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S++ A A+N+ + G PL V++AD + R
Sbjct: 122 KFSSKEPALAAMNSLSGTYIMRGCEQPLIVRFADPKRPR 160
>gi|310689909|pdb|3NNC|A Chain A, Crystal Structure Of Cugbp1 Rrm12-Rna Complex
Length = 175
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 112/172 (65%), Gaps = 4/172 (2%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEADKA 72
+K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A +A
Sbjct: 4 IKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEA 63
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G I+
Sbjct: 64 QNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIE 123
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
+ +ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+AD
Sbjct: 124 ECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFAD 175
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 82 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 140
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYAD 95
V +R A A+ A H +T+ G SSP+ VK+AD
Sbjct: 141 VTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFAD 175
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 9/88 (10%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAAL 160
K+F+G +P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AAL
Sbjct: 5 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AAL 61
Query: 161 EAINGKHKME---GSSVPLVVKWADTEK 185
EA N H M+ G P+ +K AD+EK
Sbjct: 62 EAQNALHNMKVLPGMHHPIQMKPADSEK 89
>gi|219109993|ref|XP_002176749.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411284|gb|EEC51212.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 499
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 113/188 (60%), Gaps = 2/188 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
S ++ +KLFVGQVPK M+E + F F + +V II+DK T RGC FV
Sbjct: 112 SADNDDGEDDPMKLFVGQVPKAMSEEDVFPTFDSFGPLKDVAIIRDKHTGLHRGCAFVTY 171
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALF 123
S +A++A A H+ T PGA QVK A+ + E+KLF+GML + +E E+ LF
Sbjct: 172 WSAADAERAQEALHDTFTFPGARRAAQVKPAEPSVP--ENKLFVGMLSRKATEVEIRELF 229
Query: 124 SIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADT 183
+G I+++ ++R + +SK AFL+Y + A+ A+E +N + MEG++ PL+V++AD
Sbjct: 230 EPFGEIREVYMIRNADGSSKCAAFLRYMKRGAAVQAIETLNNIYMMEGAARPLIVRFADN 289
Query: 184 EKERQARR 191
+ +R R+
Sbjct: 290 KHQRHQRQ 297
>gi|32482057|gb|AAP84375.1| mutant FCA-D1 [Triticum aestivum]
Length = 284
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 107/160 (66%), Gaps = 3/160 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG VP+ E + +F++ V EV +I+D+ T +GCCFV + +EA++A+
Sbjct: 125 VKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQGCCFVKYATSEEAERAIR 184
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A HN+ T+PGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ +G ++D
Sbjct: 185 ALHNQCTIPGAMGPVQVRYADGEKERHGSIEHKLFVASLNKQATAKEIEEVFAPFGHVED 244
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEG 171
+ I++ + S+GC F+K+ +KE ALAA+ +++G + M G
Sbjct: 245 VYIMKDGMRQSRGCGFVKFSSKEPALAAMNSLSGTYIMRG 284
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 55/89 (61%), Gaps = 7/89 (7%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR----GSQQTSKGCAFLKYETKEQALAA 159
KLF+G +P+ +E +V LF +G + ++ ++R G QQ GC F+KY T E+A A
Sbjct: 126 KLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGEQQ---GCCFVKYATSEEAERA 182
Query: 160 LEAINGKHKMEGSSVPLVVKWADTEKERQ 188
+ A++ + + G+ P+ V++AD EKER
Sbjct: 183 IRALHNQCTIPGAMGPVQVRYADGEKERH 211
>gi|207028384|ref|NP_001128707.1| CUGBP, Elav-like family member 2 [Xenopus laevis]
gi|197359134|gb|ACH69783.1| RNA binding protein Bruno-like 3b [Xenopus laevis]
Length = 493
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 119/184 (64%), Gaps = 8/184 (4%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 56 DAIKMFVGQIPRSWSEKELKDLFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 116 EAQNALHNIKTLPGVHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175
Query: 129 IKDLQILRG----SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
I++ +ILRG S+ + CAF+ + T+ A++A++ MEG S P+VVK+ADT+
Sbjct: 176 IEECRILRGPDGLSRASQHCCAFVTFSTRAMTQNAIKAMHQSQTMEGCSSPIVVKFADTQ 235
Query: 185 KERQ 188
K+++
Sbjct: 236 KDKE 239
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGC 58
M + EK ++ E KLF+G V K E + MF F ++E I++ D +RAS+ C
Sbjct: 136 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRASQHC 195
Query: 59 C-FVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
C FV +R A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 196 CAFVTFSTRAMTQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 238
>gi|50508361|dbj|BAD30314.1| putative apoptosis-related RNA binding protein [Oryza sativa
Japonica Group]
gi|50510235|dbj|BAD31433.1| putative apoptosis-related RNA binding protein [Oryza sativa
Japonica Group]
gi|215687308|dbj|BAG91895.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 414
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 105/154 (68%), Gaps = 9/154 (5%)
Query: 89 LQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSK--G 144
+QVKYADGELERL E KLFIGMLP++V E EVSALFS YG I+ L++LR Q+T K
Sbjct: 1 MQVKYADGELERLAAEQKLFIGMLPRDVKENEVSALFSQYGNIRQLKVLRSPQKTRKAAA 60
Query: 145 CAFLKYETKEQALAALEAINGKHKM-EGSSVPLVVKWADTEKERQARRAQKAQSQANNLP 203
CA L++ +KE A AA+EA+NG + GSS LVVK ADTE+E+QAR+AQKAQ+Q + P
Sbjct: 61 CAILEFGSKEHARAAIEALNGTRVVFNGSSATLVVKLADTEREKQARKAQKAQAQPSK-P 119
Query: 204 NADSQHPSLF---GALPMGYAPPYNGYGYQASGS 234
P L GA M + PPYN Y+ G+
Sbjct: 120 LRFYLFPQLLSISGAPQMSFLPPYNVLDYKTEGT 153
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 160/359 (44%), Gaps = 47/359 (13%)
Query: 2 AESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKD-KTTRASRGCCF 60
A+ + E+ ++E+ KLF+G +P+ + E ++ A+F ++ + ++ +++ + TR + C
Sbjct: 6 ADGELERLAAEQ--KLFIGMLPRDVKENEVSALFSQYGNIRQLKVLRSPQKTRKAAACAI 63
Query: 61 VICPSRQEADKAVNACHNKKTL-PGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEV 119
+ S++ A A+ A + + + G+S+ L VK AD E E+ K ++A+
Sbjct: 64 LEFGSKEHARAAIEALNGTRVVFNGSSATLVVKLADTEREKQARK-------AQKAQAQP 116
Query: 120 SALFSIYGTIKDLQILRGSQQTSKGCAFLK-YETKEQALAALEAINGKHKMEGSSVPLVV 178
S Y L + G+ Q S FL Y + +K EG++ P +
Sbjct: 117 SKPLRFY-LFPQLLSISGAPQMS----FLPPYNVLD------------YKTEGTTDPELK 159
Query: 179 KWADTEKERQARRAQKAQSQANNLPNA----DSQHPSLFGALPM-----GYAP-PYNGYG 228
++ + +S N L N D P LP+ Y P +
Sbjct: 160 DLMKMTNDKLEMLVTELKSVVNLLENRVTYNDPIQPIQHSLLPVEHDEKQYKPNECDSKT 219
Query: 229 YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPR-NYAMPPSGF 287
+ G YG + L + + P VNQGN ++G + ++ P+ + + +G+
Sbjct: 220 LEVPGHYGHTKNPLAL------YSTMYPHVNQGNLLQGLNTNIFPGTDPKISNLIQSAGY 273
Query: 288 VGSGYPAVPGLQYPMPYPGGMLGHRPLNNSPGSVSPAVANSNPSTSSSGGTGSGGQIEG 346
+ YP + GL YP+ Y G ++G P S G V+ ++SN SS+ T G +IEG
Sbjct: 274 IQPPYPDLSGLHYPVSYAGALVGDTPQYFSDGKVNIPNSHSN-HASSAANTKIGSKIEG 331
>gi|73961237|ref|XP_852916.1| PREDICTED: CUGBP, Elav-like family member 4 isoform 1 [Canis lupus
familiaris]
Length = 488
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 111/198 (56%), Gaps = 10/198 (5%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F SR
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCRFSTYCSRPSNL 109
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVS 120
+ H + +LPG + P+QVK AD E + KLF+GML SE +V
Sbjct: 110 RDRGTRHGEGSLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNTQQSEDDVR 169
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
L I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+
Sbjct: 170 RLVKALRNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 229
Query: 181 ADTEKERQARRAQKAQSQ 198
ADT+KER RR Q+ Q
Sbjct: 230 ADTDKERTMRRMQQMAGQ 247
>gi|410928558|ref|XP_003977667.1| PREDICTED: CUGBP Elav-like family member 3-like [Takifugu rubripes]
Length = 435
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 123/215 (57%), Gaps = 14/215 (6%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 5 DAIKLFVGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG V + EL +L + S+ +V LF +G+I +
Sbjct: 65 QSALHEQKTLPGLVYSGVVASSSSELLKLPITCIFATARQ--SDEDVRRLFEPFGSIDEC 122
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG TSKGCAF+K++ +A AA+ +++G M G+S LVVK+ADTEKER RR
Sbjct: 123 TVLRGPDGTSKGCAFVKFQGHAEAQAAINSLHGSRTMPGASSSLVVKFADTEKERGLRRM 182
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGY 227
Q+ SQ +FG + + + P YN Y
Sbjct: 183 QQVASQLG-----------IFGPMTLNF-PAYNAY 205
>gi|297279975|ref|XP_002801847.1| PREDICTED: CUGBP Elav-like family member 3-like, partial [Macaca
mulatta]
Length = 438
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 102/158 (64%)
Query: 41 VDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ E+ +IKDK T +GC F+ +R A KA +A H +KTLPG + P+QVK AD E
Sbjct: 1 IFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRG 60
Query: 101 LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAAL 160
+ KLF+GML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +A AA+
Sbjct: 61 EDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAI 120
Query: 161 EAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
++ + G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 121 NTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVATQ 158
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 55 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 111
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 112 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 147
>gi|429328279|gb|AFZ80039.1| RNA recognition motif domain containing protein [Babesia equi]
Length = 525
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 109/181 (60%), Gaps = 12/181 (6%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLF+ ++PK E+++ MF+EF V EV +I+DK T A + C FV S +AD A+
Sbjct: 70 IKLFLARIPKSYEESEIKKMFEEFGKVKEVAVIRDKNTNAHKCCAFVRMCSISQADAAIR 129
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL------------EHKLFIGMLPKNVSEAEVSAL 122
+ +N+ + A +Q+KYA GE +RL + KLF+G LPK V EA + L
Sbjct: 130 SLNNQCVVDTALGSVQIKYAVGETDRLGFTSLVGEAGCNDAKLFVGSLPKTVDEAAIREL 189
Query: 123 FSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
F YGT+ D+ I++ KGCAF+K KEQ L A+ ++NGK +EG + PL V++A+
Sbjct: 190 FKDYGTLDDVYIMKDQAGNGKGCAFVKMAYKEQGLFAIRSLNGKRTLEGCTRPLEVRFAE 249
Query: 183 T 183
+
Sbjct: 250 S 250
>gi|401409201|ref|XP_003884049.1| CUG-BP-and ETR-3-like factor 3, related [Neospora caninum
Liverpool]
gi|325118466|emb|CBZ54017.1| CUG-BP-and ETR-3-like factor 3, related [Neospora caninum
Liverpool]
Length = 678
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 114/195 (58%), Gaps = 16/195 (8%)
Query: 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
+KLFVG+VP+ + E L +F+ F V EV +I+DK T + FV S AD +
Sbjct: 129 EIKLFVGRVPQTVDEDALRPIFEGFGDVREVFVIRDKNTLKHKNSAFVKMASLAAADACI 188
Query: 74 NACHNKKTLPGASSPLQVKYADGELERL---------------EHKLFIGMLPKNVSEAE 118
A H+ + L A P+ VKYA GE ERL + KLF+G +P+ +SE E
Sbjct: 189 RALHSNRILDAALGPIIVKYATGEAERLGMHSLGMGGEGGGVDQAKLFVGSIPRTMSEDE 248
Query: 119 VSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLV 177
+ F YGT++++ +++ S T KGCAF+K++ KE+ L A+ +NGKH EG + P+
Sbjct: 249 LRVFFQTYGTVEEVFVMKDSATGTGKGCAFVKFKYKEEGLHAMRNLNGKHIFEGCTRPVE 308
Query: 178 VKWADTEKERQARRA 192
V++A+++ +RQ + A
Sbjct: 309 VRFAESKSQRQQQMA 323
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 52/88 (59%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
++ KLFVG +P+ M+E +L F+ + V+EV ++KD T +GC FV ++E A
Sbjct: 231 DQAKLFVGSIPRTMSEDELRVFFQTYGTVEEVFVMKDSATGTGKGCAFVKFKYKEEGLHA 290
Query: 73 VNACHNKKTLPGASSPLQVKYADGELER 100
+ + K G + P++V++A+ + +R
Sbjct: 291 MRNLNGKHIFEGCTRPVEVRFAESKSQR 318
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
+FV +P T+A L+ F F + +I DK + +RG FV + Q A AVN
Sbjct: 441 NVFVFHIPNEWTKADLIQTFSGFGNIVSCHIAVDKVSHRNRGFAFVSYDNVQSAANAVN- 499
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKLFI 107
H L A+ L V GE ++H L +
Sbjct: 500 -HMNGCL-AANKRLNVSIKKGEEHHVQHLLNV 529
>gi|321461546|gb|EFX72577.1| hypothetical protein DAPPUDRAFT_326142 [Daphnia pulex]
Length = 229
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 110/177 (62%), Gaps = 2/177 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E +KLFVGQ+P+++ EA L MF+EF + E+ ++KDK T +GC F+ +R+ A A
Sbjct: 34 EAIKLFVGQIPRNLEEADLRPMFEEFGKIYELTVLKDKLTGMHKGCAFLTYCTRESAINA 93
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
NA H K+TLPG + P+QVK AD + + KLF+GML K ++ +V LF YGTI++
Sbjct: 94 QNALHEKRTLPGMNRPIQVKPADSDNRGEDRKLFVGMLSKQQTDEDVRQLFLPYGTIEEC 153
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM--EGSSVPLVVKWADTEKER 187
ILRG SKGCAF+K+ T +A A+ +++G M SS L + D K++
Sbjct: 154 TILRGPDGQSKGCAFVKFSTHAEAQTAINSLHGSQTMPVSISSTHLDISNVDQNKKQ 210
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEA 162
KLF+G +P+N+ EA++ +F +G I +L +L+ KGCAFL Y T+E A+ A A
Sbjct: 37 KLFVGQIPRNLEEADLRPMFEEFGKIYELTVLKDKLTGMHKGCAFLTYCTRESAINAQNA 96
Query: 163 INGKHKMEGSSVPLVVKWADTEKERQARR 191
++ K + G + P+ VK AD++ + R+
Sbjct: 97 LHEKRTLPGMNRPIQVKPADSDNRGEDRK 125
>gi|198431689|ref|XP_002121627.1| PREDICTED: similar to CUG triplet repeat, RNA binding protein 2
[Ciona intestinalis]
Length = 498
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 112/181 (61%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+F+GQ+PK E+++ + + + ++NI+++K + S+GCCFV +R+ A A
Sbjct: 18 DAIKMFIGQIPKTWVESEVREFLEGYGPIYQLNILREKGSVMSKGCCFVTFYTRKAALAA 77
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
N HN KTLPG +Q+K AD E + + KLFIGM+ K ++E ++ LF +G I++
Sbjct: 78 QNELHNMKTLPGMHHCVQMKPADSENKSEDRKLFIGMISKKMTEQDLRQLFCPFGNIEEC 137
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+IL SKGCAF+ Y + A A+ ++ MEG S P+VVK AD+ K+++ ++
Sbjct: 138 RILMNPDGVSKGCAFVTYSKRVSAQNAIRNMHQSTTMEGCSAPIVVKIADSPKDKERKKT 197
Query: 193 Q 193
Q
Sbjct: 198 Q 198
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + E KS E+R KLF+G + K MTE L +F F ++E I+ + S+GC F
Sbjct: 96 MKPADSENKS-EDR-KLFIGMISKKMTEQDLRQLFCPFGNIEECRILMNPDG-VSKGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHK 104
V R A A+ H T+ G S+P+ VK AD ++ K
Sbjct: 153 VTYSKRVSAQNAIRNMHQSTTMEGCSAPIVVKIADSPKDKERKK 196
>gi|401397143|ref|XP_003879991.1| hypothetical protein NCLIV_004400 [Neospora caninum Liverpool]
gi|325114399|emb|CBZ49956.1| hypothetical protein NCLIV_004400 [Neospora caninum Liverpool]
Length = 475
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 113/187 (60%), Gaps = 13/187 (6%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFVG+VP+ M +A L +F+EF V E II+DK T + FV S AD A+
Sbjct: 37 IKLFVGRVPQSMEDAALRPIFEEFGEVKEAVIIRDKATGKHKNSAFVKMGSIAAADAAIR 96
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL------------EHKLFIGMLPKNVSEAEVSAL 122
++ + L + P+ VKYA GE E+L + KLFIG +P+ ++E EV
Sbjct: 97 GLNSTRILEQSMGPITVKYATGEAEKLGFATSSCEPGQDQAKLFIGSIPRMMTEDEVRQF 156
Query: 123 FSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
FS YGT++++ +++ + Q T KGC F+K+ KE+AL A+ ++GKH EG S P+ V++A
Sbjct: 157 FSTYGTVEEVFVMKDNVQNTGKGCCFVKFAFKEEALHAVRTLSGKHTFEGCSRPVEVRFA 216
Query: 182 DTEKERQ 188
+++ RQ
Sbjct: 217 ESKAARQ 223
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+++ KLF+G +P+ MTE ++ F + V+EV ++KD +GCCFV ++EA
Sbjct: 134 QDQAKLFIGSIPRMMTEDEVRQFFSTYGTVEEVFVMKDNVQNTGKGCCFVKFAFKEEALH 193
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
AV K T G S P++V++A+ + R + L
Sbjct: 194 AVRTLSGKHTFEGCSRPVEVRFAESKAARQQQLL 227
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 101 LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAA 159
+E KLF+G +P+++ +A + +F +G +K+ I+R + K AF+K + A AA
Sbjct: 35 VEIKLFVGRVPQSMEDAALRPIFEEFGEVKEAVIIRDKATGKHKNSAFVKMGSIAAADAA 94
Query: 160 LEAINGKHKMEGSSVPLVVKWADTEKER 187
+ +N +E S P+ VK+A E E+
Sbjct: 95 IRGLNSTRILEQSMGPITVKYATGEAEK 122
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 76
+FV VP T L+ F F V + D+TT +RG FV S + A A
Sbjct: 347 IFVFHVPNEWTYYDLMQNFGGFGNVVSARVATDRTTGRNRGFAFV---SYDNVESAATAV 403
Query: 77 HNKKTLPGASSPLQVKYADGELERLEHKL 105
+N L+V GE + ++H L
Sbjct: 404 NNMNGFMAGGKRLKVSVKKGEEQYVQHLL 432
>gi|344284431|ref|XP_003413971.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member
6-like [Loxodonta africana]
Length = 499
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 126/238 (52%), Gaps = 35/238 (14%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPG---------------ASSPLQVK--------YADGELERLEHKLFI 107
KA +A H +KTLPG AS Q + + D E +R KLF+
Sbjct: 102 KAQSALHEQKTLPGPLPREAGTTSFNFTLASRIHQKRVRPNFYPTFWDSEEDR---KLFV 158
Query: 108 GMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKH 167
GML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA++ ++G
Sbjct: 159 GMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSR 218
Query: 168 KMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYN 225
M G+S LVVK ADT++ER RR Q+ Q HP+ LP+G Y
Sbjct: 219 TMAGASSSLVVKLADTDRERALRRMQQMAGQLGTF------HPT---PLPLGACGAYT 267
>gi|237832459|ref|XP_002365527.1| RNA recognition motif domain-containing protein [Toxoplasma gondii
ME49]
gi|211963191|gb|EEA98386.1| RNA recognition motif domain-containing protein [Toxoplasma gondii
ME49]
gi|221487976|gb|EEE26190.1| RNA recognition motif domain-containing protein, putative
[Toxoplasma gondii GT1]
gi|221508501|gb|EEE34070.1| RNA recognition motif domain-containing protein, putative
[Toxoplasma gondii VEG]
Length = 648
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 113/194 (58%), Gaps = 16/194 (8%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFVG+VP + E L +F+ F V EV +I+DK+T R FV S AD +
Sbjct: 102 IKLFVGRVPHTVDEEALRPIFESFGEVREVFVIRDKSTLKHRNSAFVKMASLAAADACIR 161
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---------------EHKLFIGMLPKNVSEAEV 119
A H+ + L A P+ VKYA GE ERL + KLF+G +P+ +SE E+
Sbjct: 162 ALHSNRVLDAALGPIIVKYATGEAERLGMHSLGMGGEGGGVDQAKLFVGSIPRTMSEDEL 221
Query: 120 SALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVV 178
F YGT++++ +++ S T KGCAF+K++ KE+ L A+ +NGKH + + P+ V
Sbjct: 222 RLFFQTYGTVEEVFVMKDSATGTGKGCAFVKFKYKEEGLHAMRNLNGKHVFDECTRPVEV 281
Query: 179 KWADTEKERQARRA 192
++A+++ +RQ + A
Sbjct: 282 RFAESKSQRQQQMA 295
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 51/88 (57%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
++ KLFVG +P+ M+E +L F+ + V+EV ++KD T +GC FV ++E A
Sbjct: 203 DQAKLFVGSIPRTMSEDELRLFFQTYGTVEEVFVMKDSATGTGKGCAFVKFKYKEEGLHA 262
Query: 73 VNACHNKKTLPGASSPLQVKYADGELER 100
+ + K + P++V++A+ + +R
Sbjct: 263 MRNLNGKHVFDECTRPVEVRFAESKSQR 290
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 76
+FV +P T+A L+ F F + +I DK + +RG FV + Q A AVN
Sbjct: 410 VFVFHIPNEWTKADLVQTFSGFGNIVSCHIAVDKASHRNRGFAFVSYDNIQSAANAVN-- 467
Query: 77 HNKKTLPGASSPLQVKYADGELERLEHKLFI 107
H L A+ L V GE ++H L +
Sbjct: 468 HMNGCLV-ANKRLNVSIKKGEEHHVQHLLNV 497
>gi|224068610|ref|XP_002302783.1| predicted protein [Populus trichocarpa]
gi|222844509|gb|EEE82056.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 110/180 (61%), Gaps = 10/180 (5%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KL++ +P+ TE + ++F+E V EV + +DK T + CFV + +EAD+A+ A
Sbjct: 81 KLYIAPIPRTTTEENIRSLFEEHGSVVEVVLPRDKRTGQQQAYCFVKYATFEEADRAIRA 140
Query: 76 CHNKKTLPGASSPLQVKYADGELER----------LEHKLFIGMLPKNVSEAEVSALFSI 125
HN+ T+PG +P +V+YADGE ER KL++G + K S+ E+ +FS
Sbjct: 141 LHNQHTIPGEVAPFKVRYADGERERPVARCSMVGGFVDKLYVGSINKLASKQEIEEIFSP 200
Query: 126 YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
YG ++D+ I R + S+GCAF+K+ ++ ALAA++ +NG M G PL+V++AD +K
Sbjct: 201 YGHVEDVYIARDELKQSRGCAFVKFAHRDMALAAIKGLNGTLTMRGCDQPLIVRFADPKK 260
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 93 YADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYE 151
Y DG + KL+I +P+ +E + +LF +G++ ++ + R + + F+KY
Sbjct: 73 YGDGGVNA---KLYIAPIPRTTTEENIRSLFEEHGSVVEVVLPRDKRTGQQQAYCFVKYA 129
Query: 152 TKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
T E+A A+ A++ +H + G P V++AD E+ER R
Sbjct: 130 TFEEADRAIRALHNQHTIPGEVAPFKVRYADGERERPVARC 170
>gi|328776307|ref|XP_393833.4| PREDICTED: CUGBP Elav-like family member 4-like [Apis mellifera]
Length = 525
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/138 (50%), Positives = 94/138 (68%), Gaps = 1/138 (0%)
Query: 57 GCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSE 116
GC F+ SR A A NA H K+TLPG + P+QVK AD E R + KLF+GML K +E
Sbjct: 111 GCAFLTYYSRDSAISAQNALHEKRTLPGMNRPIQVKPADSE-NRGDRKLFVGMLSKQQTE 169
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
+V LF+ +GTI++ ILRG +S+GCAF+K + ++ALAA+ ++G M G+S L
Sbjct: 170 DDVRQLFTAFGTIEECTILRGPDGSSRGCAFVKLSSHQEALAAINTLHGSQTMPGASSSL 229
Query: 177 VVKWADTEKERQARRAQK 194
VVK+ADTEKERQ RR Q+
Sbjct: 230 VVKFADTEKERQLRRMQQ 247
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K TE + +F F ++E I++ +SRGC FV S QEA A+N
Sbjct: 157 KLFVGMLSKQQTEDDVRQLFTAFGTIEECTILRGPDG-SSRGCAFVKLSSHQEALAAINT 215
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD E ER ++
Sbjct: 216 LHGSQTMPGASSSLVVKFADTEKERQLRRM 245
>gi|350403945|ref|XP_003486959.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member
4-like [Bombus impatiens]
Length = 522
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/138 (50%), Positives = 94/138 (68%), Gaps = 1/138 (0%)
Query: 57 GCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSE 116
GC F+ SR A A NA H K+TLPG + P+QVK AD E R + KLF+GML K +E
Sbjct: 111 GCAFLTYYSRDSAISAQNALHEKRTLPGMNRPIQVKPADSE-NRGDRKLFVGMLSKQQTE 169
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
+V LF+ +GTI++ ILRG +S+GCAF+K + ++ALAA+ ++G M G+S L
Sbjct: 170 DDVRQLFTAFGTIEECTILRGPDGSSRGCAFVKLSSHQEALAAINTLHGSQTMPGASSSL 229
Query: 177 VVKWADTEKERQARRAQK 194
VVK+ADTEKERQ RR Q+
Sbjct: 230 VVKFADTEKERQLRRMQQ 247
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K TE + +F F ++E I++ +SRGC FV S QEA A+N
Sbjct: 157 KLFVGMLSKQQTEDDVRQLFTAFGTIEECTILRGPDG-SSRGCAFVKLSSHQEALAAINT 215
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD E ER ++
Sbjct: 216 LHGSQTMPGASSSLVVKFADTEKERQLRRM 245
>gi|449269404|gb|EMC80177.1| CUG-BP- and ETR-3-like factor 3, partial [Columba livia]
Length = 449
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 109/188 (57%), Gaps = 3/188 (1%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+++ E+ L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 9 DHDAIKLFVGQIPRNLEESDLKPLFEEFGRIYELTVLKDRFTGMHKGCAFLTYCARDSAL 68
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E + KLF+GML K SE +V LF +G I+
Sbjct: 69 KAQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFEPFGQIE 128
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKG + ++G M G+S LVVK+ADT+KER R
Sbjct: 129 ECTILRGPDGASKGGF---WGAGGAPHGCRHPLHGSQTMPGASSSLVVKFADTDKERTLR 185
Query: 191 RAQKAQSQ 198
R + Q
Sbjct: 186 RMHQMAGQ 193
>gi|317419091|emb|CBN81129.1| CUG-BP-and ETR-3-like factor 4 [Dicentrarchus labrax]
Length = 527
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 112/188 (59%), Gaps = 5/188 (2%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T + V R +
Sbjct: 47 DHDAIKLFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKVNLVVTKIFRSKT- 105
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
+ H +T+ + P+QVK AD E + KLF+GML K SE +V LF +G+I+
Sbjct: 106 -YLLPMHTLRTM---NRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFESFGSIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 162 ECTILRGPDGNSKGCAFVKYSSHAEAQAAISALHGSQTMPGASSSLVVKFADTDKERTIR 221
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 222 RMQQMAGQ 229
>gi|70939105|ref|XP_740139.1| RNA binding protein [Plasmodium chabaudi chabaudi]
gi|56517645|emb|CAH76403.1| RNA binding protein, putative [Plasmodium chabaudi chabaudi]
Length = 248
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 106/164 (64%), Gaps = 12/164 (7%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLF+G+VPK+ E QL +F+EF +V+EV II+DK T + FV S EAD A+
Sbjct: 85 IKLFIGRVPKNYEEEQLRPIFEEFGIVNEVVIIRDKITNIHKSSAFVKMASISEADNAIR 144
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL-----------EHKLFIGMLPKNVSEAEVSALF 123
+ +N++TL LQVKYA GE+ +L + KLFIG LPKN++E + +F
Sbjct: 145 SLNNQRTLDQQLGSLQVKYASGEVMKLGFPQNVESGVDQAKLFIGSLPKNITEESIKDMF 204
Query: 124 SIYGTIKDLQILR-GSQQTSKGCAFLKYETKEQALAALEAINGK 166
S+YG+++++ I++ S KGC+F+K+ KEQAL A+ ++NGK
Sbjct: 205 SVYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAISSLNGK 248
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 43/67 (64%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
++ KLF+G +PK++TE + MF + V+EV I+KD +T +GC FV +++A A
Sbjct: 182 DQAKLFIGSLPKNITEESIKDMFSVYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYA 241
Query: 73 VNACHNK 79
+++ + K
Sbjct: 242 ISSLNGK 248
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEA 162
KLFIG +PKN E ++ +F +G + ++ I+R K AF+K + +A A+ +
Sbjct: 86 KLFIGRVPKNYEEEQLRPIFEEFGIVNEVVIIRDKITNIHKSSAFVKMASISEADNAIRS 145
Query: 163 INGKHKMEGSSVPLVVKWADTE 184
+N + ++ L VK+A E
Sbjct: 146 LNNQRTLDQQLGSLQVKYASGE 167
>gi|308456493|ref|XP_003090683.1| CRE-ETR-1 protein [Caenorhabditis remanei]
gi|308261154|gb|EFP05107.1| CRE-ETR-1 protein [Caenorhabditis remanei]
Length = 612
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 104/172 (60%), Gaps = 1/172 (0%)
Query: 19 VGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHN 78
+ Q+P+ E +F+ + V NI++DK+T+ S+GCCFV R++A +A A HN
Sbjct: 22 IFQIPRQWNEVDCRRLFEAYGSVYSCNILRDKSTQTSKGCCFVTFFHRKDAIEAQGALHN 81
Query: 79 KKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGS 138
K + G P+Q+K AD E R E KLFIG L K SE + +FS +G I+D +LR +
Sbjct: 82 IKVIDGMHHPVQMKPADTE-NRNERKLFIGQLSKKHSEENLREIFSKFGQIEDCSVLRDN 140
Query: 139 QQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
S+GCAF+ + + A+ A + ++ MEG S PLVVK+ADT+K++ +
Sbjct: 141 DGKSRGCAFVTFTNRSCAVVATKEMHHSQTMEGCSAPLVVKFADTQKDKDVK 192
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ ER KLF+GQ+ K +E L +F +F +++ ++++D + SRGC FV +R
Sbjct: 98 DTENRNER-KLFIGQLSKKHSEENLREIFSKFGQIEDCSVLRDNDGK-SRGCAFVTFTNR 155
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
A A H+ +T+ G S+PL VK+AD + ++
Sbjct: 156 SCAVVATKEMHHSQTMEGCSAPLVVKFADTQKDK 189
>gi|340369729|ref|XP_003383400.1| PREDICTED: CUGBP Elav-like family member 3-A-like [Amphimedon
queenslandica]
Length = 447
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 119/199 (59%), Gaps = 12/199 (6%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+++KLFVGQ+PK E Q+ A+ +EF + E+NIIKDK R S+GC FV ++ A A
Sbjct: 15 DKIKLFVGQIPKEYDEEQIKALLEEFGPIHEINIIKDKEKR-SKGCAFVTYCLKESAVNA 73
Query: 73 VNACHNKKTLPGASSPLQVKYA------DGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
H K+TLP + P+QVK A GE + +LF+G L +S+ +V+ LFS +
Sbjct: 74 QQNLHEKRTLPAMNHPMQVKPATQSNRDKGE----DRRLFVGQLSPEMSDEQVANLFSPF 129
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 186
G ++D+ ILR SK AF++ ++ +A+ A++ ++ + G S P+ VK ADTE+E
Sbjct: 130 GLVEDVSILRDKDGVSKKAAFVRMGSRNEAMTAIQGLHQSCTLPGVSHPVNVKIADTERE 189
Query: 187 RQARRAQKAQSQANNLPNA 205
++ +R Q Q N P+A
Sbjct: 190 KEMKRFHH-QVQVNQPPSA 207
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 6/112 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ + E+R +LFVGQ+ M++ Q+ +F F LV++V+I++DK S+ FV
Sbjct: 96 TQSNRDKGEDR-RLFVGQLSPEMSDEQVANLFSPFGLVEDVSILRDKDG-VSKKAAFVRM 153
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELE----RLEHKLFIGMLP 111
SR EA A+ H TLPG S P+ VK AD E E R H++ + P
Sbjct: 154 GSRNEAMTAIQGLHQSCTLPGVSHPVNVKIADTEREKEMKRFHHQVQVNQPP 205
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 105 LFIGMLPKNVSEAEVSALFSIYGTIKDLQI-LRGSQQTSKGCAFLKYETKEQALAALEAI 163
LFI LP ++ +++++ +FS +G + ++ L SK F+ +ET + AA++A+
Sbjct: 363 LFIYHLPNDIKDSDLANMFSQFGKVISAKVFLDKHTNLSKCFGFVSFETSQAGQAAIQAM 422
Query: 164 NG 165
NG
Sbjct: 423 NG 424
>gi|399217298|emb|CCF73985.1| unnamed protein product [Babesia microti strain RI]
Length = 432
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 78/187 (41%), Positives = 112/187 (59%), Gaps = 14/187 (7%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFV +VPK T+ L+ F F V+EV IIKDKTT A + C FV S +AD AV
Sbjct: 29 IKLFVSRVPKSYTDTDLIPHFVPFGKVEEVTIIKDKTTNAHKLCAFVKMGSIADADSAVR 88
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL------------EHKLFIGMLPKNVSEAEVSAL 122
A HN K L + LQVKYA GE+ RL + KLFIG +PK ++E ++ +
Sbjct: 89 ALHNIKVLDASLGALQVKYAVGEVARLGLSNANSEPGVDQVKLFIGSVPKTITEEQIKKV 148
Query: 123 FSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
F YG ++++ I++ S SKGCAF+K KEQ L A++ +GK ++ S PL V++A
Sbjct: 149 FGEYGQVEEVFIMKDLSTGLSKGCAFVKMSYKEQGLYAIKMADGKLTIDNSK-PLEVRFA 207
Query: 182 DTEKERQ 188
+ + ++Q
Sbjct: 208 EAKGKQQ 214
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
++VKLF+G VPK +TE Q+ +F E+ V+EV I+KD +T S+GC FV +++ A
Sbjct: 127 DQVKLFIGSVPKTITEEQIKKVFGEYGQVEEVFIMKDLSTGLSKGCAFVKMSYKEQGLYA 186
Query: 73 VNACHNKKTLPGASSPLQVKYADGE 97
+ K T+ S PL+V++A+ +
Sbjct: 187 IKMADGKLTIDN-SKPLEVRFAEAK 210
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 8/118 (6%)
Query: 101 LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAA 159
L KLF+ +PK+ ++ ++ F +G ++++ I++ + K CAF+K + A +A
Sbjct: 27 LSIKLFVSRVPKSYTDTDLIPHFVPFGKVEEVTIIKDKTTNAHKLCAFVKMGSIADADSA 86
Query: 160 LEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALP 217
+ A++ ++ S L VK+A E R S AN+ P D Q G++P
Sbjct: 87 VRALHNIKVLDASLGALQVKYAVGEVARLGL------SNANSEPGVD-QVKLFIGSVP 137
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 76
LF+ +P A L+ F +F + I DK T +RG FV + + A KA+ C
Sbjct: 334 LFIFHIPYDWYYADLVKTFSQFGTIVSARIATDKGTGRNRGFAFVSYSTVESAVKAIT-C 392
Query: 77 HNKKTLPGASSPLQVKYADGELERLEHKL 105
N + A+ L+V GE + + H L
Sbjct: 393 MNGFII--ANKKLKVTVKKGEEQYISHLL 419
>gi|403255513|ref|XP_003920470.1| PREDICTED: CUGBP Elav-like family member 1 [Saimiri boliviensis
boliviensis]
Length = 597
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 104/161 (64%), Gaps = 3/161 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 180 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 239
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTI 129
+A NA HN K LPG P+Q+K AD E +E KLFIGM+ K +E ++ +FS +G I
Sbjct: 240 EAQNALHNMKVLPGMHHPIQMKPADSEKNNVEDRKLFIGMISKKCTENDIRVMFSSFGQI 299
Query: 130 KDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKME 170
++ +ILRG S+GCAF+ + T+ A A++A++ ME
Sbjct: 300 EECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTME 340
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAAL 160
K+F+G +P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AL A
Sbjct: 183 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 242
Query: 161 EAINGKHKMEGSSVPLVVKWADTEKERQARR 191
A++ + G P+ +K AD+EK R
Sbjct: 243 NALHNMKVLPGMHHPIQMKPADSEKNNVEDR 273
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK + E+R KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 260 MKPADSEKNNVEDR-KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAF 317
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL 101
V +R A A+ A H +T+ LQ + G L L
Sbjct: 318 VTFTTRAMAQTAIKAMHQAQTMELYLQLLQQTASSGNLNTL 358
>gi|310689905|pdb|3NMR|A Chain A, Crystal Structure Of Cugbp1 Rrm12-Rna Complex
gi|310689907|pdb|3NNA|A Chain A, Crystal Structure Of Cugbp1 Rrm12-Rna Complex
Length = 175
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 105/172 (61%), Gaps = 4/172 (2%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEADKA 72
+K FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A +A
Sbjct: 4 IKXFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEA 63
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
NA HN K LPG P+Q K AD E + KLFIG + K +E ++ FS +G I+
Sbjct: 64 QNALHNXKVLPGXHHPIQXKPADSEKNNAVEDRKLFIGXISKKCTENDIRVXFSSFGQIE 123
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
+ +ILRG S+GCAF+ + T+ A A++A + EG S P VVK+AD
Sbjct: 124 ECRILRGPDGLSRGCAFVTFTTRAXAQTAIKAXHQAQTXEGCSSPXVVKFAD 175
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAAL 160
K F+G +P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AL A
Sbjct: 5 KXFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 64
Query: 161 EAINGKHKMEGSSVPLVVKWADTEK 185
A++ + G P+ K AD+EK
Sbjct: 65 NALHNXKVLPGXHHPIQXKPADSEK 89
>gi|221060510|ref|XP_002260900.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|193810974|emb|CAQ42872.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 497
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 110/187 (58%), Gaps = 10/187 (5%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFV VPK++TE + ++F+E+ + +V IKDK +R FV S A KA+
Sbjct: 74 IKLFVSSVPKNLTENDIKSIFEEYGSIKDVVFIKDKKPNVNRANVFVRMESIYYAQKAIQ 133
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL----------EHKLFIGMLPKNVSEAEVSALFS 124
H KK L PL VK+A GELE+ E KLF+G LPK ++E ++ LF+
Sbjct: 134 DLHGKKVLCETLGPLIVKFAIGELEKYGVNMHNANENEAKLFVGSLPKEIAEEQIRNLFN 193
Query: 125 IYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
YG + ++ I++ S SK CAF+ Y KEQ + A++ +NGK +E + P+ V++A+T+
Sbjct: 194 RYGNVTEVYIMKNSNGVSKRCAFVNYAYKEQGIFAIQNLNGKIAIENAEKPIEVRFAETK 253
Query: 185 KERQARR 191
+ Q ++
Sbjct: 254 NQLQEKQ 260
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
++E KLFVG +PK + E Q+ +F + V EV I+K+ + S+ C FV +++
Sbjct: 167 ANENEAKLFVGSLPKEIAEEQIRNLFNRYGNVTEVYIMKN-SNGVSKRCAFVNYAYKEQG 225
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLF 106
A+ + K + A P++V++A+ + + E +L
Sbjct: 226 IFAIQNLNGKIAIENAEKPIEVRFAETKNQLQEKQLL 262
>gi|255548387|ref|XP_002515250.1| RNA binding protein, putative [Ricinus communis]
gi|223545730|gb|EEF47234.1| RNA binding protein, putative [Ricinus communis]
Length = 564
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 111/176 (63%), Gaps = 3/176 (1%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFV VP T + +F+ + EV + +D+ + +G CFV + +EAD+A+
Sbjct: 132 VKLFVAPVPIPTTIENICPLFEAHGSIVEVILPRDRRSGQQQGYCFVKYATIEEADRAIR 191
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---EHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A + + T+PG PL+V+YAD E ERL KL++G + K S+ E+ +FS YG ++D
Sbjct: 192 ALNGQYTIPGEVHPLKVRYADRERERLCKVVDKLYVGCINKQASKQEIEEIFSPYGHVED 251
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ I+R + + S+GCAF+K +++A+AA++A++G M G PL+VK+AD +K R
Sbjct: 252 VYIVRDNLKQSRGCAFVKLPDRDKAVAAIKALHGTFTMRGCDQPLIVKFADPKKRR 307
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Query: 95 DGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETK 153
D L+ KLF+ +P + + LF +G+I ++ + R + +G F+KY T
Sbjct: 124 DHNLDAASVKLFVAPVPIPTTIENICPLFEAHGSIVEVILPRDRRSGQQQGYCFVKYATI 183
Query: 154 EQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
E+A A+ A+NG++ + G PL V++AD E+ER + K
Sbjct: 184 EEADRAIRALNGQYTIPGEVHPLKVRYADRERERLCKVVDK 224
>gi|84999108|ref|XP_954275.1| ribonucleoprotein [Theileria annulata]
gi|65305273|emb|CAI73598.1| ribonucleoprotein, putative [Theileria annulata]
Length = 515
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 114/180 (63%), Gaps = 13/180 (7%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFV ++PK E+ L +F+EF +V +V +I+DKT+ A + C FV S +AD AV
Sbjct: 117 IKLFVARIPKTHEESDLRRLFEEFGVVKDVIVIRDKTSNAHKNCAFVKMASICQADAAVR 176
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL------------EHKLFIGMLPKNVSEAEVSAL 122
+N++ + + +Q++YA GE+ERL E KLF+G LPK+++E ++S+L
Sbjct: 177 RLNNQRVIDSSLGAVQIRYATGEVERLGFTQMAGEPGVDEAKLFVGSLPKSLTEEDLSSL 236
Query: 123 FSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
F +G ++ +L+ + +KGC F+K + KEQAL A++ +NGK +EGS PL V++A
Sbjct: 237 FKEFGEAMEVFVLKDLACGGNKGCGFVKMKYKEQALHAIKELNGKKMLEGSVRPLEVRFA 296
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 50/82 (60%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ KLFVG +PK +TE L ++FKEF EV ++KD ++GC FV +++A A
Sbjct: 215 DEAKLFVGSLPKSLTEEDLSSLFKEFGEAMEVFVLKDLACGGNKGCGFVKMKYKEQALHA 274
Query: 73 VNACHNKKTLPGASSPLQVKYA 94
+ + KK L G+ PL+V++A
Sbjct: 275 IKELNGKKMLEGSVRPLEVRFA 296
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 101 LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAA 159
+E KLF+ +PK E+++ LF +G +KD+ ++R + K CAF+K + QA AA
Sbjct: 115 VEIKLFVARIPKTHEESDLRRLFEEFGVVKDVIVIRDKTSNAHKNCAFVKMASICQADAA 174
Query: 160 LEAINGKHKMEGSSVPLVVKWADTEKER 187
+ +N + ++ S + +++A E ER
Sbjct: 175 VRRLNNQRVIDSSLGAVQIRYATGEVER 202
>gi|410911840|ref|XP_003969398.1| PREDICTED: CUGBP Elav-like family member 3-like [Takifugu rubripes]
Length = 458
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 97/142 (68%), Gaps = 1/142 (0%)
Query: 57 GCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSE 116
GC F+ +R+ A A NA H +KTLPG + P+QVK AD E R + KLF+GML K ++
Sbjct: 55 GCAFLTYCARESALIAQNALHEQKTLPGMNRPIQVKPADSE-SRGDRKLFVGMLGKQQTD 113
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
A+V +F +G+I++ +LRG TSKGCAF+KY++ +A AA+ A++G + G+S L
Sbjct: 114 ADVRKMFEPFGSIEECTVLRGPDGTSKGCAFVKYQSNAEAQAAISALHGSRTLPGASSSL 173
Query: 177 VVKWADTEKERQARRAQKAQSQ 198
VVK+AD+EKER RR Q+ SQ
Sbjct: 174 VVKFADSEKERSLRRMQQVASQ 195
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 54/87 (62%), Gaps = 5/87 (5%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICPSRQEADKAV 73
KLFVG + K T+A + MF+ F ++E +++ D T S+GC FV S EA A+
Sbjct: 101 KLFVGMLGKQQTDADVRKMFEPFGSIEECTVLRGPDGT---SKGCAFVKYQSNAEAQAAI 157
Query: 74 NACHNKKTLPGASSPLQVKYADGELER 100
+A H +TLPGASS L VK+AD E ER
Sbjct: 158 SALHGSRTLPGASSSLVVKFADSEKER 184
>gi|83273948|ref|XP_729621.1| ribonucleoprotein [Plasmodium yoelii yoelii 17XNL]
gi|23487965|gb|EAA21186.1| ribonucleoprotein homolog F21B7.26 - Arabidopsis thaliana-related
[Plasmodium yoelii yoelii]
Length = 507
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 112/187 (59%), Gaps = 10/187 (5%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFV +PK++TE + +F+E+ +V IKDK A+R FV S A KA+
Sbjct: 78 VKLFVSSIPKNLTEDDIKLIFEEYGATKDVVFIKDKKPNANRANVFVRMESIYFAQKAIE 137
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL----------EHKLFIGMLPKNVSEAEVSALFS 124
H KK + + PL VK+A GELE+ E KLF+G LPK++++ ++ +F+
Sbjct: 138 DLHGKKIICESLGPLIVKFAIGELEKYGINMNNANENEAKLFVGSLPKDITDDQIRNIFN 197
Query: 125 IYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
YG +K++ I++ S SK CAF+ Y+ KEQ + A++ +NGK +E + P+ V++A ++
Sbjct: 198 RYGNVKEVYIMKNSNGVSKRCAFVNYDYKEQGIFAVQNLNGKIAIENAEKPIEVRFAQSK 257
Query: 185 KERQARR 191
+ Q R+
Sbjct: 258 NQLQERQ 264
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG +PK +T+ Q+ +F + V EV I+K+ + S+ C FV +++ AV
Sbjct: 177 KLFVGSLPKDITDDQIRNIFNRYGNVKEVYIMKN-SNGVSKRCAFVNYDYKEQGIFAVQN 235
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKLF 106
+ K + A P++V++A + + E +L
Sbjct: 236 LNGKIAIENAEKPIEVRFAQSKNQLQERQLL 266
>gi|449460564|ref|XP_004148015.1| PREDICTED: flowering time control protein FCA-like [Cucumis
sativus]
gi|449522952|ref|XP_004168489.1| PREDICTED: flowering time control protein FCA-like [Cucumis
sativus]
Length = 307
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 104/170 (61%), Gaps = 4/170 (2%)
Query: 22 VPKHMTE--AQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNK 79
VP H E + +F+ + E+ I++DK T +G CFV + EAD+A+ A N+
Sbjct: 3 VPFHKFEWNVSIRPLFEVHGDIVEIVILRDKITGQQQGSCFVKYSTSVEADRAIRALDNQ 62
Query: 80 KTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG 137
T PG +P+ VKYAD E +RL KL++G L KN ++ E+ +FS YG ++D+ I+R
Sbjct: 63 YTFPGELTPINVKYADSEKDRLGVLEKLYVGCLNKNTTKREIEEVFSPYGFVEDIYIIRD 122
Query: 138 SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ S+G AF+KY ++ ALAA++A+NG M G PL+V+ AD +K R
Sbjct: 123 DLKQSRGSAFVKYARRDMALAAIKALNGNFTMRGCDQPLIVRLADPKKPR 172
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 2 AESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFV 61
A+S+K++ E KL+VG + K+ T+ ++ +F + V+++ II+D + SRG FV
Sbjct: 77 ADSEKDRLGVLE--KLYVGCLNKNTTKREIEEVFSPYGFVEDIYIIRDD-LKQSRGSAFV 133
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL 101
R A A+ A + T+ G PL V+ AD + R+
Sbjct: 134 KYARRDMALAAIKALNGNFTMRGCDQPLIVRLADPKKPRI 173
>gi|395729854|ref|XP_002810281.2| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member 3
[Pongo abelii]
Length = 478
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 122/240 (50%), Gaps = 54/240 (22%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI +
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDEC 124
Query: 133 QILRGSQQTSKGCA------------------------FLKYE------------TKEQA 156
+LRG TSKGCA L++E + QA
Sbjct: 125 TVLRGPDGTSKGCASFEILGFYHRHCKCSNLVFILLTLVLRFEAHHEDWGVGAGVVRGQA 184
Query: 157 L-------AALEAINGKH-----------KMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
+ L A+ + + +G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 185 MPWGWNGNQVLRALGRRDPDPAPLTCVWARAQGASSSLVVKFADTEKERGLRRMQQVATQ 244
>gi|68069003|ref|XP_676412.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56496097|emb|CAH95360.1| conserved hypothetical protein [Plasmodium berghei]
Length = 506
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 112/187 (59%), Gaps = 10/187 (5%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFV +PK++TE + +F+E+ +V IKDK A+R FV S A KA+
Sbjct: 78 VKLFVSSIPKNLTEDDIKLIFEEYGATKDVVFIKDKKPNANRANVFVRMESIYFAQKAIE 137
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL----------EHKLFIGMLPKNVSEAEVSALFS 124
H KK + + PL VK+A GELE+ E KLF+G LPK++++ ++ +F+
Sbjct: 138 DLHGKKIICESLGPLIVKFAIGELEKYGINMNNANENEAKLFVGSLPKDITDDQIRNIFN 197
Query: 125 IYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
YG +K++ I++ S SK CAF+ Y+ KEQ + A++ +NGK +E + P+ V++A ++
Sbjct: 198 RYGNVKEVYIMKNSNGVSKRCAFVNYDYKEQGIFAVQNLNGKIAIENAEKPIEVRFAQSK 257
Query: 185 KERQARR 191
+ Q R+
Sbjct: 258 NQLQERQ 264
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG +PK +T+ Q+ +F + V EV I+K+ + S+ C FV +++ AV
Sbjct: 177 KLFVGSLPKDITDDQIRNIFNRYGNVKEVYIMKN-SNGVSKRCAFVNYDYKEQGIFAVQN 235
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKLFIGML 110
+ K + A P++V++A + + E +L +L
Sbjct: 236 LNGKIAIENAEKPIEVRFAQSKNQLQERQLLNRVL 270
>gi|389585865|dbj|GAB68595.1| RNA binding protein, partial [Plasmodium cynomolgi strain B]
Length = 508
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 108/187 (57%), Gaps = 10/187 (5%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFV +PK +TE + +F+E+ + +V IKDK +R FV S A KA+
Sbjct: 85 IKLFVSSIPKSLTENDIKTIFEEYGSIKDVVFIKDKKPNVNRANVFVRMESIYYAQKAIQ 144
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL----------EHKLFIGMLPKNVSEAEVSALFS 124
H KK L PL VK+A GELE+ E KLF+G LPK ++E ++ LF+
Sbjct: 145 DLHGKKVLCETLGPLIVKFAIGELEKYGVNMHNANENEAKLFVGSLPKEIAEEQIRNLFN 204
Query: 125 IYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
YG + ++ I++ S SK CAF+ Y KEQ + A++ +NGK +E + P+ V++A+T+
Sbjct: 205 RYGNVTEVYIMKNSNGVSKRCAFVNYAYKEQGIFAIQNLNGKIAIENAEKPIEVRFAETK 264
Query: 185 KERQARR 191
+ Q ++
Sbjct: 265 NQLQEKQ 271
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
++E KLFVG +PK + E Q+ +F + V EV I+K+ + S+ C FV +++
Sbjct: 178 ANENEAKLFVGSLPKEIAEEQIRNLFNRYGNVTEVYIMKN-SNGVSKRCAFVNYAYKEQG 236
Query: 70 DKAVNACHNKKTLPGASSPLQVKYAD 95
A+ + K + A P++V++A+
Sbjct: 237 IFAIQNLNGKIAIENAEKPIEVRFAE 262
>gi|334325385|ref|XP_001367310.2| PREDICTED: CUGBP Elav-like family member 4-like [Monodelphis
domestica]
Length = 460
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 91/143 (63%)
Query: 56 RGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVS 115
R C F+ R+ A KA +A H +KTLPG + P+QVK AD E + KLF+GML K S
Sbjct: 61 RSCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLNKQQS 120
Query: 116 EAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVP 175
E +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S
Sbjct: 121 EDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSS 180
Query: 176 LVVKWADTEKERQARRAQKAQSQ 198
LVVK+ADT+KER RR Q+ Q
Sbjct: 181 LVVKFADTDKERTMRRMQQMAGQ 203
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ +S E KLFVG + K +E + +F+ F ++E I++ S+GC FV S
Sbjct: 100 DSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGN-SKGCAFVKYSSH 158
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
EA A+NA H +T+PGASS L VK+AD + ER ++
Sbjct: 159 AEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRM 197
>gi|156083038|ref|XP_001609003.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP) domain containing
protein [Babesia bovis T2Bo]
gi|154796253|gb|EDO05435.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP) domain containing
protein [Babesia bovis]
Length = 420
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 107/185 (57%), Gaps = 12/185 (6%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFV ++PK EA++ MF+EF V +V II+DK T A + C FV S +AD A+
Sbjct: 24 IKLFVARIPKTYEEAEIRKMFEEFGDVKDVVIIRDKATNAHKCCAFVRMVSISQADAAIK 83
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL------------EHKLFIGMLPKNVSEAEVSAL 122
+N + A + VKYA GE ERL + KLF+G +PKN E + +
Sbjct: 84 RLNNNCVVDTALGAVLVKYASGETERLGFTSLVGEPGVNDAKLFVGSIPKNAEEDLIREI 143
Query: 123 FSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
F YGT++D+ I++ KGCAF+K KEQ L A+ +++G ++EG P+ V++A+
Sbjct: 144 FGPYGTLEDIFIMKDQNGAGKGCAFVKMAYKEQGLYAIRSLDGMKQLEGCPRPMEVRFAE 203
Query: 183 TEKER 187
++ +
Sbjct: 204 SKANK 208
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 101 LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAA 159
+E KLF+ +PK EAE+ +F +G +KD+ I+R + K CAF++ + QA AA
Sbjct: 22 VEIKLFVARIPKTYEEAEIRKMFEEFGDVKDVVIIRDKATNAHKCCAFVRMVSISQADAA 81
Query: 160 LEAINGKHKMEGSSVPLVVKWADTEKER 187
++ +N ++ + ++VK+A E ER
Sbjct: 82 IKRLNNNCVVDTALGAVLVKYASGETER 109
>gi|359323408|ref|XP_854054.3| PREDICTED: CUGBP, Elav-like family member 6 [Canis lupus
familiaris]
Length = 413
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 100/159 (62%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 169
+ +LR TSKGCAF+K+ ++ +A AA+++++G M
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQSLHGSRTM 200
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEA 162
KLF+G +P+ + E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 163 INGKHKMEGSSVPLVVKWADTEKERQARR 191
++ + + G + P+ VK A +E + R+
Sbjct: 107 LHEQKTLPGMNRPIQVKPAASEGRGEDRK 135
>gi|297697028|ref|XP_002825676.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member 6
[Pongo abelii]
Length = 466
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 99/159 (62%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+ + E L +F+EF + E+ ++KD+ T +GC F+ +R A
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSAL 101
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK A E + KLF+GML K E +V LF +G I+
Sbjct: 102 KAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIE 161
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKM 169
+ +LR TSKGCAF+K+ ++ +A AA++ ++G M
Sbjct: 162 ECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTM 200
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEA 162
KLF+G +P+ + E ++ LF +G I +L +L+ KGCAFL Y ++ AL A A
Sbjct: 47 KLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSA 106
Query: 163 INGKHKMEGSSVPLVVKWADTEKERQARR 191
++ + + G + P+ VK A +E + R+
Sbjct: 107 LHEQKTLPGMNRPIQVKPAASEGRGEDRK 135
>gi|95007487|emb|CAJ20709.1| RNA binding protein, putative [Toxoplasma gondii RH]
gi|221480877|gb|EEE19298.1| conserved hypothetical protein [Toxoplasma gondii GT1]
gi|221501598|gb|EEE27368.1| RNA recognition motif domain-containing protein, putative
[Toxoplasma gondii VEG]
Length = 475
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 112/186 (60%), Gaps = 13/186 (6%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFVG+VP+ M +A L +F+EF V E II+DK T + F+ S AD A+
Sbjct: 37 IKLFVGRVPQSMEDAALRPIFEEFGEVKEAVIIRDKATGKHKNSAFIKMDSIAAADAAIR 96
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL------------EHKLFIGMLPKNVSEAEVSAL 122
++ + L + P+ VKYA GE E+L + KLFIG +P+ ++E EV
Sbjct: 97 GLNSTRILEQSMGPITVKYATGEAEKLGFATSSCEPGQDQAKLFIGSIPRTMTEEEVRQF 156
Query: 123 FSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
FS YGT++++ +++ + Q T KGC F+K+ KE+AL A+ ++GKH EG + P+ V++A
Sbjct: 157 FSTYGTVEEVFVMKDNVQNTGKGCCFVKFAFKEEALHAVRTLSGKHTFEGCTRPVEVRFA 216
Query: 182 DTEKER 187
+++ R
Sbjct: 217 ESKAAR 222
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 52/89 (58%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+++ KLF+G +P+ MTE ++ F + V+EV ++KD +GCCFV ++EA
Sbjct: 134 QDQAKLFIGSIPRTMTEEEVRQFFSTYGTVEEVFVMKDNVQNTGKGCCFVKFAFKEEALH 193
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELER 100
AV K T G + P++V++A+ + R
Sbjct: 194 AVRTLSGKHTFEGCTRPVEVRFAESKAAR 222
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 100 RLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALA 158
R+E KLF+G +P+++ +A + +F +G +K+ I+R + K AF+K ++ A A
Sbjct: 34 RVEIKLFVGRVPQSMEDAALRPIFEEFGEVKEAVIIRDKATGKHKNSAFIKMDSIAAADA 93
Query: 159 ALEAINGKHKMEGSSVPLVVKWADTEKER 187
A+ +N +E S P+ VK+A E E+
Sbjct: 94 AIRGLNSTRILEQSMGPITVKYATGEAEK 122
Score = 41.2 bits (95), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 76
+FV VP T L+ F F V + D+TT +RG FV S + A A
Sbjct: 347 IFVFHVPNEWTYYDLMQNFGGFGNVVSARVATDRTTGRNRGFAFV---SYDNVESAATAV 403
Query: 77 HNKKTLPGASSPLQVKYADGELERLEHKL 105
+N L+V GE + ++H L
Sbjct: 404 NNMNGFMAGGKRLKVSVKKGEEQYVQHLL 432
>gi|237844787|ref|XP_002371691.1| CELF family protein, putative [Toxoplasma gondii ME49]
gi|211969355|gb|EEB04551.1| CELF family protein, putative [Toxoplasma gondii ME49]
Length = 475
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 112/186 (60%), Gaps = 13/186 (6%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFVG+VP+ M +A L +F+EF V E II+DK T + F+ S AD A+
Sbjct: 37 IKLFVGRVPQSMEDAALRPIFEEFGEVKEAVIIRDKATGKHKNSAFIKMDSIAAADAAIR 96
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL------------EHKLFIGMLPKNVSEAEVSAL 122
++ + L + P+ VKYA GE E+L + KLFIG +P+ ++E EV
Sbjct: 97 GLNSTRILEQSMGPITVKYATGEAEKLGFATSSCEPGQDQAKLFIGSIPRTMTEDEVRQF 156
Query: 123 FSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
FS YGT++++ +++ + Q T KGC F+K+ KE+AL A+ ++GKH EG + P+ V++A
Sbjct: 157 FSTYGTVEEVFVMKDNVQNTGKGCCFVKFAFKEEALHAVRTLSGKHTFEGCTRPVEVRFA 216
Query: 182 DTEKER 187
+++ R
Sbjct: 217 ESKAAR 222
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 52/89 (58%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+++ KLF+G +P+ MTE ++ F + V+EV ++KD +GCCFV ++EA
Sbjct: 134 QDQAKLFIGSIPRTMTEDEVRQFFSTYGTVEEVFVMKDNVQNTGKGCCFVKFAFKEEALH 193
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELER 100
AV K T G + P++V++A+ + R
Sbjct: 194 AVRTLSGKHTFEGCTRPVEVRFAESKAAR 222
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 100 RLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALA 158
R+E KLF+G +P+++ +A + +F +G +K+ I+R + K AF+K ++ A A
Sbjct: 34 RVEIKLFVGRVPQSMEDAALRPIFEEFGEVKEAVIIRDKATGKHKNSAFIKMDSIAAADA 93
Query: 159 ALEAINGKHKMEGSSVPLVVKWADTEKER 187
A+ +N +E S P+ VK+A E E+
Sbjct: 94 AIRGLNSTRILEQSMGPITVKYATGEAEK 122
Score = 41.2 bits (95), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 76
+FV VP T L+ F F V + D+TT +RG FV S + A A
Sbjct: 347 IFVFHVPNEWTYYDLMQNFGGFGNVVSARVATDRTTGRNRGFAFV---SYDNVESAATAV 403
Query: 77 HNKKTLPGASSPLQVKYADGELERLEHKL 105
+N L+V GE + ++H L
Sbjct: 404 NNMNGFMAGGKRLKVSVKKGEEQYVQHLL 432
>gi|156102324|ref|XP_001616855.1| RNA binding protein [Plasmodium vivax Sal-1]
gi|148805729|gb|EDL47128.1| RNA binding protein, putative [Plasmodium vivax]
Length = 507
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 107/186 (57%), Gaps = 10/186 (5%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFV +PK +TE + +F+E+ + +V IKDK +R FV S A KA+
Sbjct: 87 KLFVSSIPKSLTENDIKTIFEEYGSIKDVVFIKDKKPNVNRANVFVRMESIYYAQKAIQD 146
Query: 76 CHNKKTLPGASSPLQVKYADGELERL----------EHKLFIGMLPKNVSEAEVSALFSI 125
H KK L PL VK+A GELE+ E KLF+G LPK ++E ++ LF+
Sbjct: 147 LHGKKVLCETLGPLIVKFAIGELEKYGVNMHNANENEAKLFVGSLPKEIAEEQIRNLFNR 206
Query: 126 YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
YG + ++ I++ S SK CAF+ Y KEQ + A++ +NGK +E + P+ V++A+T+
Sbjct: 207 YGNVTEVYIMKNSNGVSKRCAFVNYAYKEQGIFAIQNLNGKIAIENAEKPIEVRFAETKN 266
Query: 186 ERQARR 191
+ Q ++
Sbjct: 267 QLQEKQ 272
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
++E KLFVG +PK + E Q+ +F + V EV I+K+ + S+ C FV +++
Sbjct: 179 ANENEAKLFVGSLPKEIAEEQIRNLFNRYGNVTEVYIMKN-SNGVSKRCAFVNYAYKEQG 237
Query: 70 DKAVNACHNKKTLPGASSPLQVKYAD 95
A+ + K + A P++V++A+
Sbjct: 238 IFAIQNLNGKIAIENAEKPIEVRFAE 263
>gi|223996717|ref|XP_002288032.1| ribonuceoprotein [Thalassiosira pseudonana CCMP1335]
gi|220977148|gb|EED95475.1| ribonuceoprotein [Thalassiosira pseudonana CCMP1335]
Length = 356
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 118/225 (52%), Gaps = 20/225 (8%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFVGQVPK + E L +F+ + + ++ +I+D+ T RGC FV S ++A + VN
Sbjct: 2 LKLFVGQVPKTLAEEDLALLFEPYGRILDMTVIRDRRTGTHRGCAFVTYESGEDAMRVVN 61
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEH---------KLFIGMLPKNVSEAEVSALFSI 125
H K GA P QV+ A GE+E + KLF+G LP+ E V LF+
Sbjct: 62 EMHGKYRFEGAMWPAQVRPAQGEIEEGDDERDEGDEMAKLFVGQLPREADEDFVRELFTS 121
Query: 126 YGTIKDLQILRGSQQTSK-GCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
YG I + I++ +K GCAF+K+ ++ A AA++A++G+ +EG P+ VK+AD
Sbjct: 122 YGDITGIYIIKKRNNEAKNGCAFVKFRERDMAQAAIDALDGEVHLEGVDKPIRVKFADQ- 180
Query: 185 KERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGY 229
K Q ++ S+HP G +P + N G+
Sbjct: 181 --------NKGQYHHRSMSGGGSRHPG-HGVIPQAHDIYMNHRGH 216
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
+ E E+ +E KLFVGQ+P+ E + +F + + + IIK + A GC F
Sbjct: 85 IEEGDDERDEGDEMAKLFVGQLPREADEDFVRELFTSYGDITGIYIIKKRNNEAKNGCAF 144
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHK 104
V R A A++A + L G P++VK+AD + H+
Sbjct: 145 VKFRERDMAQAAIDALDGEVHLEGVDKPIRVKFADQNKGQYHHR 188
>gi|326934283|ref|XP_003213221.1| PREDICTED: CUGBP Elav-like family member 5-like [Meleagris
gallopavo]
Length = 379
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 96/158 (60%)
Query: 41 VDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++E + T S+GC F+ +R A KA A H +KTLPG + P+QVK AD E
Sbjct: 3 IEESLTLVMSTWNLSQGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRG 62
Query: 101 LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAAL 160
+ KLF+GML K SE +V LF +G I + +LRG SKGCAF+K+ + +A AA+
Sbjct: 63 GDRKLFVGMLNKQQSEDDVLRLFEPFGVIDECTVLRGPDGNSKGCAFVKFSSHTEAQAAI 122
Query: 161 EAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
A++G M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 123 HALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQ 160
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E +L +F+ F ++DE +++ S+GC FV S EA A++A
Sbjct: 66 KLFVGMLNKQQSEDDVLRLFEPFGVIDECTVLRGPDGN-SKGCAFVKFSSHTEAQAAIHA 124
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD + ER ++
Sbjct: 125 LHGSQTMPGASSSLVVKFADTDKERTLRRM 154
>gi|403296214|ref|XP_003939012.1| PREDICTED: CUGBP Elav-like family member 5 [Saimiri boliviensis
boliviensis]
Length = 363
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 100/172 (58%), Gaps = 11/172 (6%)
Query: 56 RGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVS 115
GC F+ +R A KA A H +KTLPG + P+QVK AD E + KLF+GML K S
Sbjct: 13 HGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGDRKLFVGMLNKQQS 72
Query: 116 EAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVP 175
E +V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G M G+S
Sbjct: 73 EEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSS 132
Query: 176 LVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGY 227
LVVK+ADT+KER RR Q+ Q L PSL LP PY+ Y
Sbjct: 133 LVVKFADTDKERTLRRMQQMVGQLGIL------TPSL--TLPFS---PYSAY 173
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV S EA A++A
Sbjct: 61 KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKFSSHTEAQAAIHA 119
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD + ER ++
Sbjct: 120 LHGSQTMPGASSSLVVKFADTDKERTLRRM 149
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 136 RGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
RG+Q GCAFL Y ++ A+ A A++ + + G + P+ VK AD+E R+
Sbjct: 6 RGAQWLVHGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGDRK 61
>gi|363743697|ref|XP_423569.3| PREDICTED: CUGBP Elav-like family member 5 [Gallus gallus]
Length = 404
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 92/145 (63%)
Query: 54 ASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN 113
+++GC F+ +R A KA A H +KTLPG + P+QVK AD E + KLF+GML K
Sbjct: 3 SAKGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGDRKLFVGMLNKQ 62
Query: 114 VSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSS 173
SE +V LF +G I + +LRG SKGCAF+K+ + +A AA+ A++G M G+S
Sbjct: 63 QSEDDVLRLFEPFGVIDECTVLRGPDGNSKGCAFVKFSSHTEAQAAIHALHGSQTMPGAS 122
Query: 174 VPLVVKWADTEKERQARRAQKAQSQ 198
LVVK+ADT+KER RR Q+ Q
Sbjct: 123 SSLVVKFADTDKERTLRRMQQMVGQ 147
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E +L +F+ F ++DE +++ S+GC FV S EA A++A
Sbjct: 53 KLFVGMLNKQQSEDDVLRLFEPFGVIDECTVLRGPDGN-SKGCAFVKFSSHTEAQAAIHA 111
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD + ER ++
Sbjct: 112 LHGSQTMPGASSSLVVKFADTDKERTLRRM 141
>gi|124808251|ref|XP_001348269.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|23497160|gb|AAN36708.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 514
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 108/186 (58%), Gaps = 10/186 (5%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFV +PK++TE + ++F+E+ + +V IKDK +R FV S KA+
Sbjct: 54 IKLFVSSIPKNLTEEDIKSIFQEYGNIQDVVFIKDKKPNVNRSNVFVRMESIFYGQKAIK 113
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL----------EHKLFIGMLPKNVSEAEVSALFS 124
H K+TL PL VK+A GELE+ E KLF+G LPK ++E E+ LF+
Sbjct: 114 DLHGKRTLCETLGPLIVKFAIGELEKYGVNMNNANENEAKLFVGSLPKEITEEELRELFN 173
Query: 125 IYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
YG + ++ I++ S SK CAF+ Y KEQ + A++ +NGK E + P+ V++A+T+
Sbjct: 174 RYGNVTEVYIMKNSNGISKRCAFVNYAYKEQGIFAIQNMNGKIATENAEKPIEVRFAETK 233
Query: 185 KERQAR 190
+ Q +
Sbjct: 234 NQLQEK 239
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG +PK +TE +L +F + V EV I+K+ + S+ C FV +++ A+
Sbjct: 153 KLFVGSLPKEITEEELRELFNRYGNVTEVYIMKN-SNGISKRCAFVNYAYKEQGIFAIQN 211
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKLF 106
+ K A P++V++A+ + + E LF
Sbjct: 212 MNGKIATENAEKPIEVRFAETKNQLQEKHLF 242
>gi|330801309|ref|XP_003288671.1| hypothetical protein DICPUDRAFT_152921 [Dictyostelium purpureum]
gi|325081293|gb|EGC34814.1| hypothetical protein DICPUDRAFT_152921 [Dictyostelium purpureum]
Length = 348
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 113/175 (64%), Gaps = 2/175 (1%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 76
+FVG +P M E + +F +F + ++ IIKDK T S+GC F+ +++EAD A+N
Sbjct: 19 VFVGHIPSSMNEEGVSNIFGKFGNIIDITIIKDKRTNVSKGCAFITFSTKEEADMAINTV 78
Query: 77 HNKKT-LPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQIL 135
+ T L + PLQVKY+D E+E++E KLFIGML E +V +F +G I++L ++
Sbjct: 79 NESNTFLENMNKPLQVKYSDNEIEKMERKLFIGML-GTADEDQVRQIFGNFGIIEELTVV 137
Query: 136 RGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
R KG F+K+ T++++ AL ++ KH + GS++PL+VK+ADTE++++ +
Sbjct: 138 REKDGKPKGYGFIKFSTRDESENALRELDQKHTVPGSNLPLIVKFADTERQKRKK 192
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 103 HKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI-LRGSQQTSKGCAFLKYETKEQALAALE 161
+ LFI LP + E+ LFS YG + ++ + + Q SK F+ Y+ + A+ A++
Sbjct: 267 NDLFIYYLPFTYGDEELKQLFSPYGNVVSSKVFIDKNTQQSKCFGFVSYDNTQSAIQAIQ 326
Query: 162 AINGKHKMEGSSVPLVVK 179
+NG+ +EG + + K
Sbjct: 327 ELNGR-AIEGKKLKVNFK 343
>gi|444509480|gb|ELV09276.1| CUGBP Elav-like family member 5, partial [Tupaia chinensis]
Length = 329
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/146 (46%), Positives = 91/146 (62%)
Query: 57 GCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSE 116
GC F+ +R A KA A H +KTLPG + P+QVK AD E + KLF+GML K SE
Sbjct: 1 GCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGDRKLFVGMLNKQQSE 60
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
+V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G M G+S L
Sbjct: 61 EDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSL 120
Query: 177 VVKWADTEKERQARRAQKAQSQANNL 202
VVK+ADT+KER RR Q+ Q L
Sbjct: 121 VVKFADTDKERTLRRMQQMVGQLGIL 146
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV S EA A++A
Sbjct: 48 KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKFSSHTEAQAAIHA 106
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD + ER ++
Sbjct: 107 LHGSQTMPGASSSLVVKFADTDKERTLRRM 136
>gi|397492762|ref|XP_003817289.1| PREDICTED: CUGBP Elav-like family member 3 isoform 3 [Pan paniscus]
gi|426331467|ref|XP_004026702.1| PREDICTED: CUGBP Elav-like family member 3 isoform 3 [Gorilla
gorilla gorilla]
Length = 417
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 92/142 (64%)
Query: 57 GCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSE 116
GC F+ +R A KA +A H +KTLPG + P+QVK AD E + KLF+GML K ++
Sbjct: 2 GCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTD 61
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
+V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++ + G+S L
Sbjct: 62 EDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSL 121
Query: 177 VVKWADTEKERQARRAQKAQSQ 198
VVK+ADTEKER RR Q+ +Q
Sbjct: 122 VVKFADTEKERGLRRMQQVATQ 143
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 40 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 96
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 97 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 132
>gi|289547602|ref|NP_001166119.1| CUGBP Elav-like family member 3 isoform 2 [Homo sapiens]
Length = 418
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 92/142 (64%)
Query: 57 GCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSE 116
GC F+ +R A KA +A H +KTLPG + P+QVK AD E + KLF+GML K ++
Sbjct: 2 GCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTD 61
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
+V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++ + G+S L
Sbjct: 62 EDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSL 121
Query: 177 VVKWADTEKERQARRAQKAQSQ 198
VVK+ADTEKER RR Q+ +Q
Sbjct: 122 VVKFADTEKERGLRRMQQVATQ 143
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 40 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 96
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 97 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 132
>gi|432862983|ref|XP_004069969.1| PREDICTED: CUGBP Elav-like family member 2-like [Oryzias latipes]
Length = 462
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 100/162 (61%), Gaps = 4/162 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ TE +L +F+ F V ++NI++D+ S+GCCFV +R+ A
Sbjct: 44 DAIKMFVGQIPRSWTETELKELFEPFGAVYQINILRDRAQNPPQSKGCCFVTFYTRKAAL 103
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K E EV +FS +G
Sbjct: 104 EAQNALHNIKTLSGMHHPIQMKPADSEKTTAVEDRKLFIGMVSKKYGENEVRMMFSSFGQ 163
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKME 170
I++ +ILRG S+GCAF+ + T+ A A++ ++ ME
Sbjct: 164 IEECRILRGPDGQSRGCAFVTFATRAMAQNAIKTMHHSQTME 205
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 9/100 (9%)
Query: 95 DGELERLEH------KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGC 145
+G LE ++ K+F+G +P++ +E E+ LF +G + + ILR Q SKGC
Sbjct: 32 NGSLEHMDQPDPDAIKMFVGQIPRSWTETELKELFEPFGAVYQINILRDRAQNPPQSKGC 91
Query: 146 AFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
F+ + T++ AL A A++ + G P+ +K AD+EK
Sbjct: 92 CFVTFYTRKAALEAQNALHNIKTLSGMHHPIQMKPADSEK 131
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E ++ MF F ++E I++ + SRGC F
Sbjct: 124 MKPADSEKTTAVEDRKLFIGMVSKKYGENEVRMMFSSFGQIEECRILRGPDGQ-SRGCAF 182
Query: 61 VICPSRQEADKAVNACHNKKTL 82
V +R A A+ H+ +T+
Sbjct: 183 VTFATRAMAQNAIKTMHHSQTM 204
>gi|71032751|ref|XP_766017.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352974|gb|EAN33734.1| RNA-binding protein, putative [Theileria parva]
Length = 539
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 118/202 (58%), Gaps = 24/202 (11%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFV ++PK E+ L +F+EF V +V +I+DK T + + C FV S +AD AV
Sbjct: 137 IKLFVARIPKTYEESDLRRLFQEFGPVKDVIVIRDKVTNSHKNCAFVKMASICQADAAVR 196
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL------------EHKLFIGMLPKNVSEAEVSAL 122
+N++ + + +Q++YA GE+ERL E KLF+G LPK+++E ++++L
Sbjct: 197 RLNNQRVIDSSLGAVQIRYATGEVERLGFTQMAGEPGMDEAKLFVGSLPKSLTEDDLASL 256
Query: 123 FSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
F +G ++ +L+ + +KGC F+K + KEQAL A++ +NGK +EGS PL V++A
Sbjct: 257 FKDFGEPLEVFVLKDLTCGGNKGCGFVKMKYKEQALYAIKELNGKKMLEGSIRPLEVRFA 316
Query: 182 -----------DTEKERQARRA 192
D E R+ RA
Sbjct: 317 MNKTGVSGQAQDFESRRKRSRA 338
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 51/82 (62%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ KLFVG +PK +TE L ++FK+F EV ++KD T ++GC FV +++A A
Sbjct: 235 DEAKLFVGSLPKSLTEDDLASLFKDFGEPLEVFVLKDLTCGGNKGCGFVKMKYKEQALYA 294
Query: 73 VNACHNKKTLPGASSPLQVKYA 94
+ + KK L G+ PL+V++A
Sbjct: 295 IKELNGKKMLEGSIRPLEVRFA 316
>gi|299472576|emb|CBN78228.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 583
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 122/210 (58%), Gaps = 33/210 (15%)
Query: 46 IIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGEL--ERL-- 101
+I+D+ T A RGC F+ +R+ ++AV+ HNK LP A +P+QV+ AD ++ +RL
Sbjct: 2 VIRDRQTDAHRGCAFLTYQTREAGERAVDKFHNKVKLPNAHNPVQVRPADSQMGDDRLGP 61
Query: 102 ---------EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYET 152
E+KLF+GMLP + + ++ +FS +G I ++ +R T KGCAF+K+ T
Sbjct: 62 NGRVAPVDRENKLFVGMLPHDADDMTLTEVFSRFGEITEIYCMRNPDGTPKGCAFVKFST 121
Query: 153 KEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSL 212
+ A+AA+EA++ K M+G++ LVVK+AD +K AQ A+ +P P
Sbjct: 122 RSAAIAAIEALHEKCTMDGATRALVVKFADVKK------AQTAKGWM--VP------PDA 167
Query: 213 FGALPMGYAPPYNGYG------YQASGSYG 236
GA P+GY Y+G G +QA+G+ G
Sbjct: 168 RGASPLGYNGRYHGGGTSVGGYWQATGAPG 197
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 105 LFIGMLPKNVSEAEVSALFSIYGTIKDLQI-LRGSQQTSKGCAFLKYETKEQALAALEAI 163
LFI LP ++++A+++ F+ +G + ++ L Q SKG F+ Y +A A+ +
Sbjct: 327 LFIYHLPNDLTDADLATAFAPFGHVVSAKVFLDKRTQESKGFGFVSYNHPAEAEVAISKM 386
Query: 164 NG 165
NG
Sbjct: 387 NG 388
>gi|62088108|dbj|BAD92501.1| trinucleotide repeat containing 4 variant [Homo sapiens]
Length = 441
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 92/142 (64%)
Query: 57 GCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSE 116
GC F+ +R A KA +A H +KTLPG + P+QVK AD E + KLF+GML K ++
Sbjct: 25 GCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTD 84
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
+V +F +GTI + +LRG TSKGCAF+K++T +A AA+ ++ + G+S L
Sbjct: 85 EDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSL 144
Query: 177 VVKWADTEKERQARRAQKAQSQ 198
VVK+ADTEKER RR Q+ +Q
Sbjct: 145 VVKFADTEKERGLRRMQQVATQ 166
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 63 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 119
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 120 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 155
>gi|351694709|gb|EHA97627.1| CUG-BP- and ETR-3-like factor 5, partial [Heterocephalus glaber]
Length = 300
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/172 (44%), Positives = 101/172 (58%), Gaps = 12/172 (6%)
Query: 57 GCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVS 115
GC F+ +R A KA A H +KTLPG + P+QVK AD E + KLF+GML K S
Sbjct: 1 GCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQS 60
Query: 116 EAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVP 175
E +V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G M G+S
Sbjct: 61 EEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSS 120
Query: 176 LVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGY 227
LVVK+ADT+KER RR Q+ Q L PSL ALP PY+ Y
Sbjct: 121 LVVKFADTDKERTLRRMQQMVGQLGIL------TPSL--ALPFS---PYSAY 161
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+ E + +R KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV
Sbjct: 38 ADSESRGGRDR-KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKF 95
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
S EA A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 96 SSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 137
>gi|12642586|gb|AAK00297.1|AF314172_1 BRUNOL2 [Mus musculus]
Length = 436
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 92/139 (66%), Gaps = 2/139 (1%)
Query: 55 SRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPK 112
S+GCCFV +R+ A +A NA HN K LPG P+Q+K AD E + KLFIGM+ K
Sbjct: 7 SKGCCFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISK 66
Query: 113 NVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGS 172
+E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++ MEG
Sbjct: 67 KCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGC 126
Query: 173 SVPLVVKWADTEKERQARR 191
S P+VVK+ADT+K+++ +R
Sbjct: 127 SSPMVVKFADTQKDKEQKR 145
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + K TE + MF F ++E I++ SRGC F
Sbjct: 43 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGP-DGLSRGCAF 101
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
V +R A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 102 VTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 146
>gi|194389144|dbj|BAG61589.1| unnamed protein product [Homo sapiens]
Length = 145
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/137 (45%), Positives = 91/137 (66%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA +
Sbjct: 7 IKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQS 66
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI + +
Sbjct: 67 ALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTV 126
Query: 135 LRGSQQTSKGCAFLKYE 151
LRG TSKGCAF+K++
Sbjct: 127 LRGPDGTSKGCAFVKFQ 143
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEA 162
KLF+G +P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 163 INGKHKMEGSSVPLVVKWADTEKERQARR 191
++ + + G + P+ VK AD+E + R+
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESRGEDRK 96
>gi|350580719|ref|XP_003123087.3| PREDICTED: CUGBP, Elav-like family member 5 [Sus scrofa]
Length = 444
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 100/172 (58%), Gaps = 12/172 (6%)
Query: 57 GCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVS 115
GC F+ +R A KA A H +KTLPG + P+QVK AD E + KLF+GML K S
Sbjct: 46 GCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQS 105
Query: 116 EAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVP 175
E +V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G M G+S
Sbjct: 106 EEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSS 165
Query: 176 LVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGY 227
LVVK+ADT+KER RR Q+ Q L PSL LP PY+ Y
Sbjct: 166 LVVKFADTDKERTLRRMQQMVGQLGIL------TPSL--TLPFS---PYSAY 206
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+ E + +R KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV
Sbjct: 83 ADSESRGGRDR-KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKF 140
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
S EA A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 141 SSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 182
>gi|449270204|gb|EMC80905.1| CUG-BP- and ETR-3-like factor 5, partial [Columba livia]
Length = 403
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 89/143 (62%), Gaps = 1/143 (0%)
Query: 57 GCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVS 115
GC F+ +R A KA A H +KTLPG + P+QVK AD E + KLF+GML K S
Sbjct: 1 GCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQS 60
Query: 116 EAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVP 175
E +V LF +G I + +LRG SKGCAF+K+ + +A AA+ A++G M G+S
Sbjct: 61 EDDVLRLFEPFGVIDECTVLRGPDGNSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSS 120
Query: 176 LVVKWADTEKERQARRAQKAQSQ 198
LVVK+ADT+KER RR Q+ Q
Sbjct: 121 LVVKFADTDKERTLRRMQQMVGQ 143
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+ E + +R KLFVG + K +E +L +F+ F ++DE +++ S+GC FV
Sbjct: 38 ADSESRGGRDR-KLFVGMLNKQQSEDDVLRLFEPFGVIDECTVLRGPDGN-SKGCAFVKF 95
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
S EA A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 96 SSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 137
>gi|66362598|ref|XP_628265.1| bruno-like protein with 2 RRM domains [Cryptosporidium parvum Iowa
II]
gi|46229739|gb|EAK90557.1| bruno-like protein with 2 RRM domains [Cryptosporidium parvum Iowa
II]
Length = 690
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 105/189 (55%), Gaps = 13/189 (6%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+K+ K VKLFV +VPKHMT +LL +F ++ LV E NII+D + +GC FV
Sbjct: 257 NKRRSKRGYAPVKLFVNRVPKHMTNEELLKIFNKYGLVVECNIIRD--SNGPKGCAFVRF 314
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL-----------EHKLFIGMLPK 112
+ EA A+ H K L P+QVKYADGE+ERL K+F+G LPK
Sbjct: 315 SNIYEAQNAILCIHGKTVLDKEVGPIQVKYADGEIERLGLSPDVQPCGESVKVFVGSLPK 374
Query: 113 NVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGS 172
N +E ++ LF +G + ++ I+R + + SK AF+ + K A A+ ++ K+ + S
Sbjct: 375 NCTEDQLLLLFKQFGHVDEVHIIRDNNKQSKCSAFVTFPRKFMAENAIMFLDKKYIFDNS 434
Query: 173 SVPLVVKWA 181
P+ V+ A
Sbjct: 435 KRPIEVRLA 443
>gi|440912153|gb|ELR61745.1| CUGBP Elav-like family member 5, partial [Bos grunniens mutus]
Length = 398
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 99/172 (57%), Gaps = 12/172 (6%)
Query: 58 CCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSE 116
C F+ +R A KA A H +KTLPG + P+QVK AD E + KLF+GML K SE
Sbjct: 1 CAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSE 60
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
+V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G M G+S L
Sbjct: 61 EDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSL 120
Query: 177 VVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 228
VVK+ADT+KER RR Q+ Q L PSL LP PY+ Y
Sbjct: 121 VVKFADTDKERTLRRMQQMVGQLGIL------TPSL--TLPFS---PYSAYA 161
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+ E + +R KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV
Sbjct: 37 ADSESRGGRDR-KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKF 94
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
S EA A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 95 SSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 136
>gi|351714404|gb|EHB17323.1| CUG-BP- and ETR-3-like factor 1 [Heterocephalus glaber]
Length = 195
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 102/163 (62%), Gaps = 4/163 (2%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEADKA 72
+K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCC V +R+ A +A
Sbjct: 16 IKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCSVTFYTRKAALEA 75
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
NA HN K LPG P+Q+K AD E + KLFIGM+ + +E ++ +FS +G I+
Sbjct: 76 QNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISEKCTENDIRVMFSSFGQIE 135
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSS 173
+ +ILRG S+GCAF+ + T+ A A++A++ ME S
Sbjct: 136 EYRILRGPDGLSRGCAFVTFTTRGMAQTAIKAMHQAQTMEVGS 178
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 9/88 (10%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAAL 160
K+F+G +P+ SE ++ LF YG + ++ +LR Q SKGC + + T++ AAL
Sbjct: 17 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCSVTFYTRK---AAL 73
Query: 161 EAINGKHKME---GSSVPLVVKWADTEK 185
EA N H M+ G P+ +K AD+EK
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSEK 101
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G + + TE + MF F ++E I++ SRGC F
Sbjct: 94 MKPADSEKNNAVEDRKLFIGMISEKCTENDIRVMFSSFGQIEEYRILRGPDG-LSRGCAF 152
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLE 102
V +R A A+ A H +T+ S+ QVK GE+ LE
Sbjct: 153 VTFTTRGMAQTAIKAMHQAQTMEVGSA--QVK---GEITYLE 189
>gi|410950073|ref|XP_004001486.1| PREDICTED: LOW QUALITY PROTEIN: CUGBP Elav-like family member 5
[Felis catus]
Length = 479
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 99/172 (57%), Gaps = 12/172 (6%)
Query: 58 CCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSE 116
C F+ +R A KA A H +KTLPG + P+QVK AD E + KLF+GML K SE
Sbjct: 22 CAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSE 81
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
+V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G M G+S L
Sbjct: 82 EDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSL 141
Query: 177 VVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 228
VVK+ADT+KER RR Q+ Q L PSL LP PY+ Y
Sbjct: 142 VVKFADTDKERTLRRMQQMVGQLGIL------TPSL--TLPFS---PYSAYA 182
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+ E + +R KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV
Sbjct: 58 ADSESRGGRDR-KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKF 115
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
S EA A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 116 SSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 157
>gi|355701918|gb|EHH29271.1| CUGBP Elav-like family member 4, partial [Macaca mulatta]
Length = 409
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 103/198 (52%), Gaps = 38/198 (19%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHK-------------- 95
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVS 120
+ P+QVK AD E + KLF+GML K SE +V
Sbjct: 96 --------------MNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVR 141
Query: 121 ALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKW 180
LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+
Sbjct: 142 RLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 201
Query: 181 ADTEKERQARRAQKAQSQ 198
ADT+KER RR Q+ Q
Sbjct: 202 ADTDKERTMRRMQQMAGQ 219
>gi|395513595|ref|XP_003761008.1| PREDICTED: CUGBP Elav-like family member 5 [Sarcophilus harrisii]
Length = 429
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/262 (37%), Positives = 128/262 (48%), Gaps = 30/262 (11%)
Query: 58 CCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSE 116
C F+ +R A KA A H +KTLPG + P+QVK AD E + KLF+GML K SE
Sbjct: 30 CAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSE 89
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
+V LF +G I + +LRG SKGCAF+K+ + +A AA+ A++G M G+S L
Sbjct: 90 EDVLRLFQPFGVIDECTVLRGPDGNSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSL 149
Query: 177 VVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYG 236
VVK+ADT+KER RR Q+ Q PSL LP PY+ Y +
Sbjct: 150 VVKFADTDKERTLRRMQQMVGQLGIF------TPSL--TLPFS---PYSAY------AQA 192
Query: 237 LMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVGS---GYP 293
LMQ + + G + + P V +S N P P SG G
Sbjct: 193 LMQQQTTVLSTSHGSY-LSPGVAFSPCHIQQIGAVSLNGIPATPIAPASGLHSPPLLGTA 251
Query: 294 AVPGLQYPM--------PYPGG 307
AVPGL P+ P+PGG
Sbjct: 252 AVPGLVTPITNGFAGVVPFPGG 273
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+ E + +R KLFVG + K +E +L +F+ F ++DE +++ S+GC FV
Sbjct: 66 ADSESRGGRDR-KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGN-SKGCAFVKF 123
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
S EA A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 124 SSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 165
>gi|341865543|tpg|DAA34911.1| TPA_exp: RRM domain-containing RNA-binding protein Bruno
[Pleurobrachia pileus]
Length = 384
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 114/196 (58%), Gaps = 8/196 (4%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFVGQVPK+ E+ L F+++ + + + +D+ ++A +GC FV + A+ A++
Sbjct: 18 LKLFVGQVPKNFEESDLKPYFEKYGPLVNIKVCRDRDSKAHKGCAFVTFTNLDNAENAMH 77
Query: 75 ACHNKKTLPGASSPLQVKYA-DGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQ 133
H++ LPGA +Q+K D + ++ + +LF+GM+ K+++ E+ A+F +G + D
Sbjct: 78 EMHDRIALPGAKKEMQIKAVHDDDNKKFDKRLFVGMISKSLNGDELKAMFEQFGEVVDCN 137
Query: 134 ILR---GSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
IL ++ S+GC F+K+ L A++ ++ MEG + PLVVK AD+ ++ R
Sbjct: 138 ILTSMINGEKMSRGCGFVKFAKASSCLQAIKEMHQSQTMEGCNSPLVVKHADSPADKMKR 197
Query: 191 RA----QKAQSQANNL 202
A ++ S+ NN
Sbjct: 198 NASGFEEREDSKRNNF 213
>gi|118485698|gb|ABK94699.1| unknown [Populus trichocarpa]
Length = 247
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 98/160 (61%), Gaps = 10/160 (6%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KL++ +P+ TE + ++F+E V EV + +DK T + CFV + +EAD+A+ A
Sbjct: 81 KLYIAPIPRTTTEENIRSLFEEHGSVVEVVLPRDKRTGQQQAYCFVKYATFEEADRAIRA 140
Query: 76 CHNKKTLPGASSPLQVKYADGELER----------LEHKLFIGMLPKNVSEAEVSALFSI 125
HN+ T+PG +P +V+YADGE ER KL++G + K S+ E+ +FS
Sbjct: 141 LHNQHTIPGEVAPFKVRYADGERERPVARCSMVGGFVDKLYVGSINKLASKQEIEEIFSP 200
Query: 126 YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAING 165
YG ++D+ I R + S+GCAF+K+ ++ ALAA++ +NG
Sbjct: 201 YGHVEDVYIARDELKQSRGCAFVKFAHRDMALAAIKGLNG 240
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEA 162
KL+I +P+ +E + +LF +G++ ++ + R + + F+KY T E+A A+ A
Sbjct: 81 KLYIAPIPRTTTEENIRSLFEEHGSVVEVVLPRDKRTGQQQAYCFVKYATFEEADRAIRA 140
Query: 163 INGKHKMEGSSVPLVVKWADTEKER 187
++ +H + G P V++AD E+ER
Sbjct: 141 LHNQHTIPGEVAPFKVRYADGERER 165
>gi|193204848|ref|NP_001122629.1| Protein ETR-1, isoform d [Caenorhabditis elegans]
gi|351063344|emb|CCD71499.1| Protein ETR-1, isoform d [Caenorhabditis elegans]
Length = 535
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 95/158 (60%), Gaps = 1/158 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ E +F+++ V NI++DK+T+AS+GCCFV R++A +A
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEA 112
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A HN K + G P+Q+K AD E R E KLFIG L K +E + +F+ +G I+D
Sbjct: 113 QGALHNIKVIEGMHHPVQMKPADTE-NRNERKLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKME 170
+LR S+GCAF+ + + A+ A + ++ ME
Sbjct: 172 SVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTME 209
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Query: 79 KKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG- 137
K T P ++ V + E + K+F+G +P+ +E + LF YG++ ILR
Sbjct: 31 KDTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDK 90
Query: 138 SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
S Q SKGC F+ + ++ A+ A A++ +EG P+ +K ADTE + +
Sbjct: 91 STQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNERK 143
>gi|354488715|ref|XP_003506512.1| PREDICTED: CUGBP Elav-like family member 5-like [Cricetulus
griseus]
Length = 569
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 98/265 (36%), Positives = 127/265 (47%), Gaps = 45/265 (16%)
Query: 58 CCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKNVSE 116
C F+ +R A KA A H +KTLPG + P+QVK AD E + KLF+GML K SE
Sbjct: 173 CAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQQSE 232
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
+V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A++G M G+S L
Sbjct: 233 EDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSL 292
Query: 177 VVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG-------- 228
VVK+ADT++ER RR Q+ Q L PSL LP PY+ Y
Sbjct: 293 VVKFADTDRERTLRRMQQMVGQLGIL------TPSL--TLPFS---PYSAYAQALMQQQT 341
Query: 229 --YQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSG 286
SGSY PP + Q A +S N P P SG
Sbjct: 342 TVLSTSGSYLSPGVAFPPCH-----------IQQIGA-------VSLNGLPATPITPASG 383
Query: 287 FVGS---GYPAVPGLQYPMP--YPG 306
G AVPGL P+P +PG
Sbjct: 384 LHSPPLLGTAAVPGLVAPIPNAFPG 408
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+ E + +R KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV
Sbjct: 209 ADSESRGGRDR-KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKF 266
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
S EA A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 267 SSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDRERTLRRM 308
>gi|313227641|emb|CBY22788.1| unnamed protein product [Oikopleura dioica]
Length = 401
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 109/186 (58%), Gaps = 2/186 (1%)
Query: 34 MFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY 93
MFKEF V ++ I++D+ T SRGCCFV + AD A A + + LPG +P+Q++
Sbjct: 1 MFKEFGEVFDLQILRDRITGHSRGCCFVTFFETKSADDAQRALNGIRVLPGMLNPVQMRA 60
Query: 94 ADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETK 153
AD E +R + +LFIGMLP E + +F YG I++LQ+LR TS+ CAFL + ++
Sbjct: 61 ADSE-KRSDRRLFIGMLPITCDEEMLKKMFEQYGKIQELQVLRKFNGTSRRCAFLTFSSR 119
Query: 154 EQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK-AQSQANNLPNADSQHPSL 212
+A +A++A+N + +VV+ ADT K+++ R+ ++ +S A L + L
Sbjct: 120 LEAQSAVQALNNTVVSSICAQGMVVRLADTPKQKEKRKLERQLKSCAMQLQRLCTDEDDL 179
Query: 213 FGALPM 218
G L +
Sbjct: 180 VGKLLL 185
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 8/109 (7%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK+S +LF+G +P E L MF+++ + E+ +++ K SR C F
Sbjct: 58 MRAADSEKRSDR---RLFIGMLPITCDEEMLKKMFEQYGKIQELQVLR-KFNGTSRRCAF 113
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADG----ELERLEHKL 105
+ SR EA AV A +N + + V+ AD E +LE +L
Sbjct: 114 LTFSSRLEAQSAVQALNNTVVSSICAQGMVVRLADTPKQKEKRKLERQL 162
>gi|355562286|gb|EHH18880.1| hypothetical protein EGK_19447, partial [Macaca mulatta]
gi|355782632|gb|EHH64553.1| hypothetical protein EGM_17798, partial [Macaca fascicularis]
Length = 433
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 90/136 (66%), Gaps = 2/136 (1%)
Query: 55 SRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPK 112
S GCCFV +R+ A +A NA HN KTLPG P+Q+K AD E + KLFIGM+ K
Sbjct: 1 SVGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSK 60
Query: 113 NVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGS 172
+E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++ MEG
Sbjct: 61 KCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGC 120
Query: 173 SVPLVVKWADTEKERQ 188
S P+VVK+ADT+K+++
Sbjct: 121 SSPIVVKFADTQKDKE 136
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 37 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGL-SRGCAF 95
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 96 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 135
>gi|351705755|gb|EHB08674.1| CUG-BP- and ETR-3-like factor 6, partial [Heterocephalus glaber]
Length = 393
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 98/169 (57%), Gaps = 9/169 (5%)
Query: 57 GCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSE 116
GC F+ +R A KA +A H +KTLPG + P+QVK A E + KLF+GML K E
Sbjct: 1 GCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGE 60
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
+V LF +G I++ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S L
Sbjct: 61 EDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSQTMAGASSSL 120
Query: 177 VVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYN 225
VVK ADT++ER RR Q+ Q L HP+ LP+G Y
Sbjct: 121 VVKLADTDRERALRRMQQMAGQLGAL------HPA---PLPLGACGAYT 160
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E KLFVG + K E + +F+ F ++E +++ S+GC FV S+ EA A
Sbjct: 45 EDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDG-TSKGCAFVKFGSQGEAQAA 103
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+ H +T+ GASS L VK AD + ER ++
Sbjct: 104 IQGLHGSQTMAGASSSLVVKLADTDRERALRRM 136
>gi|45786151|gb|AAH68008.1| TNRC4 protein, partial [Homo sapiens]
Length = 407
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 63/133 (47%), Positives = 88/133 (66%), Gaps = 1/133 (0%)
Query: 66 RQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSI 125
R A KA +A H +KTLPG + P+QVK AD E R + KLF+GML K ++ +V +F
Sbjct: 1 RDSALKAQSALHEQKTLPGMNRPIQVKPADSE-SRGDRKLFVGMLGKQQTDEDVRKMFEP 59
Query: 126 YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
+GTI + +LRG TSKGCAF+K++T +A AA+ ++ + G+S LVVK+ADTEK
Sbjct: 60 FGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEK 119
Query: 186 ERQARRAQKAQSQ 198
ER RR Q+ +Q
Sbjct: 120 ERGLRRMQQVATQ 132
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 5/87 (5%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICPSRQEADKAV 73
KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV + EA A+
Sbjct: 38 KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQTHAEAQAAI 94
Query: 74 NACHNKKTLPGASSPLQVKYADGELER 100
N H+ +TLPGASS L VK+AD E ER
Sbjct: 95 NTLHSSRTLPGASSSLVVKFADTEKER 121
>gi|67611128|ref|XP_667137.1| RNA binding protein [Cryptosporidium hominis TU502]
gi|54658240|gb|EAL36907.1| RNA binding protein [Cryptosporidium hominis]
Length = 903
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 110/195 (56%), Gaps = 13/195 (6%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFVG+VP+++ E L +FK + V V++I++K+T RG V S +AD A+
Sbjct: 305 IKLFVGRVPRNIEEDDLRDLFKLYGRVVNVSVIREKSTGIHRGAALVTMESVAQADFALR 364
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL------------EHKLFIGMLPKNVSEAEVSAL 122
++ K L PL+V+Y+ GE ERL + KLF+G LP+N++E E+ L
Sbjct: 365 ELNSIKVLDELRGPLKVQYSTGEPERLGFESESCIPGVDQVKLFVGALPRNITEDEIREL 424
Query: 123 FSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
FS YG I ++ I+R KGCAF+KY KEQ L A+++++G + + P+ V++A
Sbjct: 425 FSPYGQINEIFIMREPHSGVGKGCAFVKYAFKEQGLFAIKSLHGALTLADVNRPIEVRFA 484
Query: 182 DTEKERQARRAQKAQ 196
+ + AQ
Sbjct: 485 SKNHQSSTSSSLIAQ 499
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 51/82 (62%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
++VKLFVG +P+++TE ++ +F + ++E+ I+++ + +GC FV +++ A
Sbjct: 403 DQVKLFVGALPRNITEDEIRELFSPYGQINEIFIMREPHSGVGKGCAFVKYAFKEQGLFA 462
Query: 73 VNACHNKKTLPGASSPLQVKYA 94
+ + H TL + P++V++A
Sbjct: 463 IKSLHGALTLADVNRPIEVRFA 484
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
Query: 101 LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR-GSQQTSKGCAFLKYETKEQALAA 159
+E KLF+G +P+N+ E ++ LF +YG + ++ ++R S +G A + E+ QA A
Sbjct: 303 VEIKLFVGRVPRNIEEDDLRDLFKLYGRVVNVSVIREKSTGIHRGAALVTMESVAQADFA 362
Query: 160 LEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALP 217
L +N ++ PL V+++ E ER ++ +P D Q GALP
Sbjct: 363 LRELNSIKVLDELRGPLKVQYSTGEPERLGFESESC------IPGVD-QVKLFVGALP 413
>gi|151936117|gb|ABS18835.1| ELAV-type RNA binding protein variant D [Caenorhabditis elegans]
Length = 327
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 95/158 (60%), Gaps = 1/158 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ E +F+++ V NI++DK+T+AS+GCCFV R++A +A
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEA 112
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A HN K + G P+Q+K AD E R E KLFIG L K +E + +F+ +G I+D
Sbjct: 113 QGALHNIKVIEGMHHPVQMKPADTE-NRNERKLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKME 170
+LR S+GCAF+ + + A+ A + ++ ME
Sbjct: 172 SVLRDQDGKSRGCAFVTFTNRSCAVVATKEMHHSQTME 209
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Query: 79 KKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG- 137
K T P ++ V + E + K+F+G +P+ +E + LF YG++ ILR
Sbjct: 31 KDTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDK 90
Query: 138 SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
S Q SKGC F+ + ++ A+ A A++ +EG P+ +K ADTE + +
Sbjct: 91 STQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNERK 143
>gi|120419456|gb|ABM21547.1| trinucleotide repeat containing 4 [Bos taurus]
Length = 139
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 85/131 (64%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA +
Sbjct: 7 IKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQS 66
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
A H +KTLPG + P+QVK AD E + KLF+GML K ++ +V +F +GTI + +
Sbjct: 67 ALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTV 126
Query: 135 LRGSQQTSKGC 145
LRG TSKGC
Sbjct: 127 LRGPDGTSKGC 137
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEA 162
KLF+G +P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 163 INGKHKMEGSSVPLVVKWADTEKERQARR 191
++ + + G + P+ VK AD+E + R+
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSESRGEDRK 96
>gi|348583729|ref|XP_003477625.1| PREDICTED: CUGBP Elav-like family member 6-like [Cavia porcellus]
Length = 472
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 97/168 (57%), Gaps = 9/168 (5%)
Query: 58 CCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEA 117
C F+ +R A KA +A H +KTLPG + P+QVK A E + KLF+GML K E
Sbjct: 81 CAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGEE 140
Query: 118 EVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLV 177
+V LF +G I++ +LR TSKGCAF+K+ ++ +A AA++ ++G M G+S LV
Sbjct: 141 DVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMAGASSSLV 200
Query: 178 VKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYN 225
VK ADT++ER RR Q+ Q L HP+ LP+G Y
Sbjct: 201 VKLADTDRERALRRMQQMAGQLGAL------HPA---PLPLGACGAYT 239
>gi|118402071|ref|XP_001033355.1| hypothetical protein TTHERM_00421000 [Tetrahymena thermophila]
gi|89287703|gb|EAR85692.1| hypothetical protein TTHERM_00421000 [Tetrahymena thermophila
SB210]
Length = 307
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 106/173 (61%), Gaps = 9/173 (5%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFVGQ+PK + Q+ F +F + EV II+D + +GC FV S +A+KA+
Sbjct: 54 LKLFVGQLPKTWEKEQVKDFFSKFGRIYEVQIIRDNKGQ-HKGCAFVKFASMTDAEKAIE 112
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL------EHKLFIGMLPKNVSEAEVSALFSIYGT 128
A N T PG + +++K+AD E ERL +HKLFIG LPK+ +E + +F +G
Sbjct: 113 AVKNT-TFPGMKNNVEIKWADNEEERLGVNQDSDHKLFIGSLPKSCTEQNIKDIFEFFGE 171
Query: 129 IKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
I++L +++ +QQ ++ AFLK++ KE+A A+ +N + + + P+ V++A
Sbjct: 172 IEELHLMKDNQQNTRQ-AFLKFKQKEKAHLAIRNLNSQVYINDAENPIEVRFA 223
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 14/114 (12%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAI 163
KLF+G LPK + +V FS +G I ++QI+R ++ KGCAF+K+ + A A+EA+
Sbjct: 55 KLFVGQLPKTWEKEQVKDFFSKFGRIYEVQIIRDNKGQHKGCAFVKFASMTDAEKAIEAV 114
Query: 164 NGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALP 217
G + +KWAD E+ER N DS H G+LP
Sbjct: 115 KNT-TFPGMKNNVEIKWADNEEERLG-------------VNQDSDHKLFIGSLP 154
>gi|397632370|gb|EJK70525.1| hypothetical protein THAOC_08111, partial [Thalassiosira oceanica]
Length = 548
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 102/184 (55%), Gaps = 13/184 (7%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQVPK + E L +F+ + + ++ +I+D+ + RGC FV S ++A +
Sbjct: 21 QSLKLFVGQVPKTLIEEDLAYVFEPYGPIVDLTVIRDRRSGNHRGCAFVTFESGEDAMRV 80
Query: 73 VNACHNKKTLPGASSPLQVKYADGEL----------ERLEHKLFIGMLPKNVSEAEVSAL 122
V H + GA P QV+ A GE+ E KLF+G LP++ E V L
Sbjct: 81 VADMHGRYKFDGAPWPAQVRPAAGEIDGDGENNDGFEGEGTKLFVGQLPRDAEEDFVRDL 140
Query: 123 FSIYGTIKDLQILRGSQQTS---KGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVK 179
F+ YG+I + I+R + GCAF+KY + A A+EA++G+ ++EG PL VK
Sbjct: 141 FAPYGSIVSVHIIRKRNPDAAARNGCAFVKYRERSMAERAIEALDGELQLEGVDRPLKVK 200
Query: 180 WADT 183
+A+
Sbjct: 201 FANV 204
>gi|209878013|ref|XP_002140448.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209556054|gb|EEA06099.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 546
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 143/300 (47%), Gaps = 52/300 (17%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFVG++P+++ E +L +F+ + V ++I+++K T RG V S +AD A+
Sbjct: 110 IKLFVGRIPRNIEEDELKKLFELYGNVVNISIVREKNTGIHRGAALVTMESIAQADYAIR 169
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL------------EHKLFIGMLPKNVSEAEVSAL 122
+ K L PL+V+Y+ GE ER + KLF+G LPKN++E E+S +
Sbjct: 170 ELNLIKVLDNLRGPLKVQYSTGEAERFGFEAESCIPGVDQVKLFVGALPKNITEEEISDV 229
Query: 123 FSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
FS YG I ++ I+R +GCAF+KY KEQ L A+ +++G + + PL V++A
Sbjct: 230 FSPYGQINEIFIMREIHTGFCRGCAFVKYAFKEQGLYAIASLHGAATLGDVNRPLEVRFA 289
Query: 182 DTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYR 241
S ANNL H S M + PP + +Y + R
Sbjct: 290 ------------SRSSNANNLFLTHGLHHS-----AMAHNPP-------SGSAYHIFNNR 325
Query: 242 LP-PMQNQPGFHGIIPPV------NQGNAMR--------GASPDLSSNMGPRNYAMPPSG 286
P + N + P V ++G+ R G S ++NM PR+ P SG
Sbjct: 326 KPCHIVNDASYLSANPTVVGNILSHRGSCSRNITLFDHNGISVAATTNMYPRSRGHPLSG 385
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 51/82 (62%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
++VKLFVG +PK++TE ++ +F + ++E+ I+++ T RGC FV +++ A
Sbjct: 208 DQVKLFVGALPKNITEEEISDVFSPYGQINEIFIMREIHTGFCRGCAFVKYAFKEQGLYA 267
Query: 73 VNACHNKKTLPGASSPLQVKYA 94
+ + H TL + PL+V++A
Sbjct: 268 IASLHGAATLGDVNRPLEVRFA 289
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 8/118 (6%)
Query: 101 LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAA 159
+E KLF+G +P+N+ E E+ LF +YG + ++ I+R +G A + E+ QA A
Sbjct: 108 MEIKLFVGRIPRNIEEDELKKLFELYGNVVNISIVREKNTGIHRGAALVTMESIAQADYA 167
Query: 160 LEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALP 217
+ +N ++ PL V+++ E ER A+ +P D Q GALP
Sbjct: 168 IRELNLIKVLDNLRGPLKVQYSTGEAERFGFEAESC------IPGVD-QVKLFVGALP 218
>gi|432119145|gb|ELK38360.1| CUGBP Elav-like family member 6 [Myotis davidii]
Length = 416
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 90/142 (63%)
Query: 57 GCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSE 116
GC F+ +R A KA +A H +KTLPG + P+QVK A E + KLF+GML K E
Sbjct: 15 GCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPAASEGRGEDRKLFVGMLGKQQGE 74
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
+V LF +G I++ +LR TSKGCAF+K+ ++ +A AA+++++G M G+S L
Sbjct: 75 DDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQSLHGSRTMAGASSSL 134
Query: 177 VVKWADTEKERQARRAQKAQSQ 198
VVK ADT++ER RR Q+ Q
Sbjct: 135 VVKLADTDRERALRRMQQMVGQ 156
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICPSRQEAD 70
E KLFVG + K E + +F+ F ++E +++ D T S+GC FV S+ EA
Sbjct: 59 EDRKLFVGMLGKQQGEDDVRRLFQPFGHIEECTVLRSPDGT---SKGCAFVKFGSQGEAQ 115
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A+ + H +T+ GASS L VK AD + ER ++
Sbjct: 116 AAIQSLHGSRTMAGASSSLVVKLADTDRERALRRM 150
>gi|126649123|ref|XP_001388078.1| RNA binding protein [Cryptosporidium parvum Iowa II]
gi|126117166|gb|EAZ51266.1| RNA binding protein, putative [Cryptosporidium parvum Iowa II]
Length = 906
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 105/180 (58%), Gaps = 13/180 (7%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFVG+VP+++ E L +FK + V V++I++K+T RG V S +AD A+
Sbjct: 306 IKLFVGRVPRNIEEDDLRDLFKLYGRVVNVSVIREKSTGIHRGAALVTMESVAQADFALR 365
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL------------EHKLFIGMLPKNVSEAEVSAL 122
++ K L PL+V+Y+ GE ERL + KLF+G LP+N+ E E+ L
Sbjct: 366 ELNSIKVLDELRGPLKVQYSTGEPERLGFESESCIPGVDQVKLFVGALPRNIIEDEIREL 425
Query: 123 FSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
FS YG I ++ I+R KGCAF+KY KEQ L A+++++G + + P+ V++A
Sbjct: 426 FSPYGQINEIFIMREPHSGVGKGCAFVKYAFKEQGLFAIKSLHGALTLADVNRPIEVRFA 485
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 50/82 (60%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
++VKLFVG +P+++ E ++ +F + ++E+ I+++ + +GC FV +++ A
Sbjct: 404 DQVKLFVGALPRNIIEDEIRELFSPYGQINEIFIMREPHSGVGKGCAFVKYAFKEQGLFA 463
Query: 73 VNACHNKKTLPGASSPLQVKYA 94
+ + H TL + P++V++A
Sbjct: 464 IKSLHGALTLADVNRPIEVRFA 485
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
Query: 101 LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR-GSQQTSKGCAFLKYETKEQALAA 159
+E KLF+G +P+N+ E ++ LF +YG + ++ ++R S +G A + E+ QA A
Sbjct: 304 VEIKLFVGRVPRNIEEDDLRDLFKLYGRVVNVSVIREKSTGIHRGAALVTMESVAQADFA 363
Query: 160 LEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALP 217
L +N ++ PL V+++ E ER ++ +P D Q GALP
Sbjct: 364 LRELNSIKVLDELRGPLKVQYSTGEPERLGFESESC------IPGVD-QVKLFVGALP 414
>gi|47219454|emb|CAG10818.1| unnamed protein product [Tetraodon nigroviridis]
Length = 413
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 99/186 (53%), Gaps = 43/186 (23%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLF+GQ+P+++ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 8 DAIKLFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKA 67
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
NA H +KTLPG + P+QVK AD E
Sbjct: 68 QNALHEQKTLPGMNRPIQVKPADSE----------------------------------- 92
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
RG GCAF+KY++ +A AA+ ++G + G+S LVVK+AD+EKER RR
Sbjct: 93 --SRG------GCAFVKYQSNAEAQAAINTLHGSRTLPGASSSLVVKFADSEKERSLRRM 144
Query: 193 QKAQSQ 198
Q+ SQ
Sbjct: 145 QQVASQ 150
>gi|195117928|ref|XP_002003497.1| GI17946 [Drosophila mojavensis]
gi|193914072|gb|EDW12939.1| GI17946 [Drosophila mojavensis]
Length = 580
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 98/185 (52%), Gaps = 45/185 (24%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+PK E +L +F++F V +N+++DK T SR
Sbjct: 298 DNIKMFVGQIPKTWDELKLRRLFEQFGRVHTLNVLRDKVTSISR---------------- 341
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
E KLF+GML K +EA+V LF+ +GTI++
Sbjct: 342 -----------------------------ERKLFVGMLNKKYTEADVRQLFTGHGTIEEC 372
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LR SKGCAF+ + TK+ A+ A++A++ MEG S PLVVK+ADT+KE+ ++
Sbjct: 373 TVLRDQVGQSKGCAFVTFATKQNAIGAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 432
Query: 193 QKAQS 197
Q+ Q+
Sbjct: 433 QQLQA 437
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
S ER KLFVG + K TEA + +F ++E +++D+ + S+GC FV ++Q A
Sbjct: 340 SRER-KLFVGMLNKKYTEADVRQLFTGHGTIEECTVLRDQVGQ-SKGCAFVTFATKQNAI 397
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A+ A H +T+ G S+PL VK+AD + E+ + K+
Sbjct: 398 GAIKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 432
>gi|47221605|emb|CAF97870.1| unnamed protein product [Tetraodon nigroviridis]
Length = 400
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 109/215 (50%), Gaps = 55/215 (25%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E+ +IKDK T +GC F+ +R+ A KA
Sbjct: 8 DAIKLFVGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKA 67
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+A H +KTLPG + P+QVK AD E
Sbjct: 68 QSALHEQKTLPGMNRPIQVKPADSE----------------------------------- 92
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
RG GCAF+K++ +A AA+ +++G M G+S LVVK+ADTEKER RR
Sbjct: 93 --GRG------GCAFVKFQGHAEAQAAINSLHGSRTMPGASSSLVVKFADTEKERGLRRM 144
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGY 227
Q+ SQ +FG + + + P YN Y
Sbjct: 145 QQVASQLG-----------IFGPMTLNF-PAYNAY 167
>gi|334348392|ref|XP_001367508.2| PREDICTED: CUGBP Elav-like family member 2-like [Monodelphis
domestica]
Length = 575
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 87/133 (65%), Gaps = 2/133 (1%)
Query: 58 CCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVS 115
CCFV +R+ A +A NA HN KTLPG P+Q+K AD E + KLFIGM+ K +
Sbjct: 146 CCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCN 205
Query: 116 EAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVP 175
E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++ ++ MEG S P
Sbjct: 206 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKTMHQSQTMEGCSSP 265
Query: 176 LVVKWADTEKERQ 188
+VVK+ADT+K+++
Sbjct: 266 IVVKFADTQKDKE 278
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 179 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 237
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ H +T+ G SSP+ VK+AD + ++
Sbjct: 238 VTFSTRAMAQNAIKTMHQSQTMEGCSSPIVVKFADTQKDK 277
>gi|209879588|ref|XP_002141234.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209556840|gb|EEA06885.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 517
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 120/244 (49%), Gaps = 22/244 (9%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFV +VPK M L+ +F ++ +V E NII+D + +GC FV + EA A+
Sbjct: 199 VKLFVNRVPKWMRNEDLMKIFSKYGVVVECNIIRD--SNGPKGCAFVRFATIVEAQNAIL 256
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL-----------EHKLFIGMLPKNVSEAEVSALF 123
H K L + P+QVKYADGE+ERL K+F+G LPK +EAE+ LF
Sbjct: 257 CIHGKTVLNEEAGPIQVKYADGEIERLGLSPDVQPCGESVKVFVGCLPKTCTEAELLTLF 316
Query: 124 SIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADT 183
+G + ++ I+R + SK AF+ + + A A+ ++ K+ ++ P+ V+ A
Sbjct: 317 RRFGHVDEVHIIRDDNRQSKCSAFVTFPKRYMAENAIVFLDKKYILDNGKRPIEVRLA-- 374
Query: 184 EKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLP 243
R + ++ S NN+ + P L P YN SG+Y R+
Sbjct: 375 ---RSRSKQKQLSSNHNNVRRTN--EPKLTNTNPNNNTNSYNILN--NSGNYSNASGRMQ 427
Query: 244 PMQN 247
M N
Sbjct: 428 NMDN 431
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E VK+FVG +PK TEA+LL +F+ F VDEV+II+D R S+ FV P R A+ A
Sbjct: 294 ESVKVFVGCLPKTCTEAELLTLFRRFGHVDEVHIIRDD-NRQSKCSAFVTFPKRYMAENA 352
Query: 73 VNACHNKKTLPGASSPLQVKYA 94
+ K L P++V+ A
Sbjct: 353 IVFLDKKYILDNGKRPIEVRLA 374
>gi|118404110|ref|NP_001072378.1| CUGBP Elav-like family member 4 [Xenopus (Silurana) tropicalis]
gi|123914769|sp|Q0V9L3.1|CELF4_XENTR RecName: Full=CUGBP Elav-like family member 4; Short=CELF-4;
AltName: Full=Bruno-like protein 4; AltName:
Full=CUG-BP- and ETR-3-like factor 4; AltName:
Full=RNA-binding protein BRUNOL-4
gi|111305714|gb|AAI21491.1| bruno-like 4, RNA binding protein [Xenopus (Silurana) tropicalis]
Length = 424
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 96/188 (51%), Gaps = 43/188 (22%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A
Sbjct: 43 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESAL 102
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
KA +A H +KTLPG + P+QVK AD E
Sbjct: 103 KAQSALHEQKTLPGMNRPIQVKPADSE--------------------------------- 129
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ GCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 130 ----------SRGGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 179
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 180 RMQQMAGQ 187
>gi|401405877|ref|XP_003882388.1| putative RNA binding protein [Neospora caninum Liverpool]
gi|325116803|emb|CBZ52356.1| putative RNA binding protein [Neospora caninum Liverpool]
Length = 1060
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 111/212 (52%), Gaps = 33/212 (15%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFVG++P +TE L +F +F + ++ +I+D+ T A +GC FV S +AD+A+
Sbjct: 101 IKLFVGRLPLTVTEEMLCTLFSQFGPIADLLLIRDRHTNAFKGCAFVRMQSITDADRAIR 160
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---------------EHKLFIGMLPKNVSEAEV 119
+ L A LQVKYA GE ERL + KLF+G LP ++ E +
Sbjct: 161 HLDSAYVLDPALGGLQVKYAVGEAERLGLPGTSGSGAAAGVDQVKLFVGSLPPDIKEDAL 220
Query: 120 SALFSIYGTIKDLQILRGSQ----------------QTSKGCAFLKYETKEQALAALEAI 163
LF +G ++++ ++R Q ++ GCAF+++ KE+AL A+ +
Sbjct: 221 RDLFERFGRVEEVFLMRDDQPLSGNHLGGGAAKPGKKSRTGCAFVRFAYKEEALFAIGEL 280
Query: 164 NGKHKMEGSSVPLVVKWADTEKERQARRAQKA 195
NGK M GS + V++A E R + AQ A
Sbjct: 281 NGKFVMPGSQRAMEVRFA--ENRRSSSSAQGA 310
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 84/191 (43%), Gaps = 28/191 (14%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKD--------------KTTRASR-G 57
++VKLFVG +P + E L +F+ F V+EV +++D K + SR G
Sbjct: 202 DQVKLFVGSLPPDIKEDALRDLFERFGRVEEVFLMRDDQPLSGNHLGGGAAKPGKKSRTG 261
Query: 58 CCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEA 117
C FV ++EA A+ + K +PG+ ++V++A+ R G P + + +
Sbjct: 262 CAFVRFAYKEEALFAIGELNGKFVMPGSQRAMEVRFAE---NRRSSSSAQGAAPASRTAS 318
Query: 118 EVSALFSIYGTIKDLQILRGSQQ-----TSKGC----AFLKYETKEQALAALEAINGKHK 168
S S + + L G+ + S C ++ ++ L L ++G+H
Sbjct: 319 ASSCFMSSMDSSRGGSALPGADEYPENVRSTSCFPSRVDMERFSRMDPLDVLSCLDGRHD 378
Query: 169 -MEGSSVPLVV 178
G+S L +
Sbjct: 379 CFSGTSESLAI 389
>gi|432944122|ref|XP_004083333.1| PREDICTED: CUGBP Elav-like family member 2-like [Oryzias latipes]
Length = 578
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 137/275 (49%), Gaps = 57/275 (20%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++NI++D++ S+GCCFV +R+ A
Sbjct: 53 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAAL 112
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN KTL G P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 113 EAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQ 172
Query: 129 IKDLQILRGSQQTSKGC------------------------AFLK--------------- 149
I++ +ILRG S+G FL+
Sbjct: 173 IEECRILRGPDGLSRGRLQAALQVFARIHLAEVRPVGTLFPVFLRLSADSVCPHRPRLLL 232
Query: 150 -------YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
++T+ ++L A E + EG S P+VVK+ADT+K+++ RR Q+ +Q
Sbjct: 233 IQAFSPDFDTQMESLFADEIVG-----EGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQ 287
Query: 203 PNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGL 237
N+ + SL G G P Y QA+ S L
Sbjct: 288 LNSATTWGSLTGL--GGLTPQYLALLQQATSSGNL 320
>gi|356503942|ref|XP_003520758.1| PREDICTED: flowering time control protein FCA-like [Glycine max]
Length = 496
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 132/272 (48%), Gaps = 44/272 (16%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
K++V VP+ TE ++ +F+E + E+ ++K K T +G CFV + EAD+A+
Sbjct: 73 CKVYVAPVPRTATEDEIRPVFEEHGTIVEIVLLKHKKTGTRQGSCFVKYATFDEADRAIK 132
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL------------------EHKLFIGMLPKNVSE 116
+NK T G S P+ VK+AD ELERL K+F+ + K +
Sbjct: 133 VLNNKYTFAGESYPVVVKFADRELERLGVRGLCRNMEKKDPLEEVADKVFVSSINKEATN 192
Query: 117 AEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
++ +FS YG ++D+ +++ G AF+K+ +E ALAA++ +N M G PL
Sbjct: 193 KDIEEIFSPYGHVEDIFF-----KSTHGYAFVKFSNREMALAAIKGLNKTFTMRGCDHPL 247
Query: 177 VVKWADTEKERQAR-RAQKAQSQANNLPNADSQHPSLF----------GALPMGYAPPYN 225
+V++AD +K + R AN P SQ P+++ G + + +AP ++
Sbjct: 248 IVRFADPKKPKTGESRGNYLSVNANFGPC--SQEPAVWPLPNFGDSNTGGIILPHAPYHS 305
Query: 226 GYGYQASGSY--------GLMQYRLPPMQNQP 249
+ S+ ++Q+ PP Q P
Sbjct: 306 TIAHPQVTSHMQNWEPGATVLQHPFPPHQVHP 337
>gi|345478760|ref|XP_001605205.2| PREDICTED: CUGBP Elav-like family member 4-like [Nasonia
vitripennis]
Length = 382
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 77/107 (71%), Gaps = 1/107 (0%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK AD E R + KLF+GML K +E +V LF+ +GTI++ ILRG TS+GCAF
Sbjct: 4 PIQVKPADSE-NRGDRKLFVGMLSKQQTEDDVRQLFTAFGTIEECTILRGPDGTSRGCAF 62
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
+K+ T ++A +A+ +++G M G+S LVVK+ADTEKERQ RR Q+
Sbjct: 63 IKFSTHQEAQSAINSLHGSQTMPGASSSLVVKYADTEKERQLRRMQQ 109
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 55/92 (59%), Gaps = 5/92 (5%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICPSRQEADKAV 73
KLFVG + K TE + +F F ++E I++ D T SRGC F+ + QEA A+
Sbjct: 19 KLFVGMLSKQQTEDDVRQLFTAFGTIEECTILRGPDGT---SRGCAFIKFSTHQEAQSAI 75
Query: 74 NACHNKKTLPGASSPLQVKYADGELERLEHKL 105
N+ H +T+PGASS L VKYAD E ER ++
Sbjct: 76 NSLHGSQTMPGASSSLVVKYADTEKERQLRRM 107
>gi|403220835|dbj|BAM38968.1| ribonucleoprotein [Theileria orientalis strain Shintoku]
Length = 604
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 102/183 (55%), Gaps = 13/183 (7%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLF+ ++P+ E + +F+EF V++V IIKDK T + C FV S +AD A+
Sbjct: 87 IKLFIARIPRDHKEEDIRKLFEEFGTVEDVTIIKDKATNVPKNCAFVKMASICQADAAIR 146
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL------------EHKLFIGMLPKNVSEAEVSAL 122
+ +N+ T+ +Q++YA GE ERL KLF+G LP++ SE ++ L
Sbjct: 147 SLNNQHTVEPGLGAVQIRYATGEPERLGFTQMVGEPGVDTAKLFVGSLPRSFSEQDLQDL 206
Query: 123 FSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
F YG + +++ +KGC F++ KEQAL A+ ++ K ++ S P+ V++A
Sbjct: 207 FKDYGDAVETFLMKDMNSGGNKGCGFVRMRYKEQALYAIRELDHKKMVKDSVKPIEVRFA 266
Query: 182 DTE 184
++
Sbjct: 267 QSK 269
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 47/82 (57%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ KLFVG +P+ +E L +FK++ E ++KD + ++GC FV +++A A
Sbjct: 185 DTAKLFVGSLPRSFSEQDLQDLFKDYGDAVETFLMKDMNSGGNKGCGFVRMRYKEQALYA 244
Query: 73 VNACHNKKTLPGASSPLQVKYA 94
+ +KK + + P++V++A
Sbjct: 245 IRELDHKKMVKDSVKPIEVRFA 266
>gi|297824821|ref|XP_002880293.1| hypothetical protein ARALYDRAFT_483907 [Arabidopsis lyrata subsp.
lyrata]
gi|297326132|gb|EFH56552.1| hypothetical protein ARALYDRAFT_483907 [Arabidopsis lyrata subsp.
lyrata]
Length = 505
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 101/181 (55%), Gaps = 9/181 (4%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KL+V + K TE + +F+ + V E+ + KDK T CFV + +E + A+ A
Sbjct: 110 KLYVAPISKTSTEYDIRQVFETYGNVTEIILPKDKMTGDRAAYCFVKYKTVEEGNAAIAA 169
Query: 76 CHNKKTLPGASSPLQVKYADGELERL---------EHKLFIGMLPKNVSEAEVSALFSIY 126
+ T PG PL+V++AD E ER+ KL+I L K ++ EV +FS +
Sbjct: 170 LAEQFTFPGEMLPLKVRFADAERERIGFAPVQPPDNPKLYIRCLNKQTTKMEVHEVFSRF 229
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 186
G I+D+ + + S+G AF+++ +E ALAA++ +NG M GS PL+V++AD +K
Sbjct: 230 GIIEDIYMALDDMKISRGYAFVQFSCREMALAAIKGLNGVFTMRGSDQPLIVRFADPKKP 289
Query: 187 R 187
R
Sbjct: 290 R 290
>gi|410045110|ref|XP_003313076.2| PREDICTED: CUGBP Elav-like family member 1 [Pan troglodytes]
Length = 461
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 87/136 (63%), Gaps = 4/136 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 41 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 100
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+A NA HN K LPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 160
Query: 129 IKDLQILRGSQQTSKG 144
I++ +ILRG S+G
Sbjct: 161 IEECRILRGPDGLSRG 176
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 9/88 (10%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAAL 160
K+F+G +P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AAL
Sbjct: 44 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK---AAL 100
Query: 161 EAINGKHKME---GSSVPLVVKWADTEK 185
EA N H M+ G P+ +K AD+EK
Sbjct: 101 EAQNALHNMKVLPGMHHPIQMKPADSEK 128
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGC 58
M + EK ++ E KLF+G + K TE + MF F ++E I++ D +R
Sbjct: 121 MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGKVNL 180
Query: 59 CFVICPSRQEADKAVNAC 76
VI + + V +C
Sbjct: 181 FVVIATTSKYMMACVESC 198
>gi|340725298|ref|XP_003401009.1| PREDICTED: CUGBP Elav-like family member 4-like isoform 2 [Bombus
terrestris]
Length = 374
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 75/107 (70%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK AD E + KLF+GML K +E +V LF+ +GTI++ ILRG +S+GCAF
Sbjct: 4 PIQVKPADSENRGEDRKLFVGMLSKQQTEDDVRQLFTAFGTIEECTILRGPDGSSRGCAF 63
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
+K + ++ALAA+ ++G M G+S LVVK+ADTEKERQ RR Q+
Sbjct: 64 VKLSSHQEALAAINTLHGSQTMPGASSSLVVKFADTEKERQLRRMQQ 110
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ ++ E KLFVG + K TE + +F F ++E I++ +SRGC FV S
Sbjct: 11 DSENRGEDRKLFVGMLSKQQTEDDVRQLFTAFGTIEECTILRGPDG-SSRGCAFVKLSSH 69
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
QEA A+N H +T+PGASS L VK+AD E ER ++
Sbjct: 70 QEALAAINTLHGSQTMPGASSSLVVKFADTEKERQLRRM 108
>gi|294946457|ref|XP_002785076.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Perkinsus
marinus ATCC 50983]
gi|239898488|gb|EER16872.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Perkinsus
marinus ATCC 50983]
Length = 430
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 126/247 (51%), Gaps = 23/247 (9%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRAS---RGCCFVICPSRQEADK 71
VKLFVG++P E ++ ++F + V+EV+II+ KT GC FV + QEA
Sbjct: 8 VKLFVGKLPCDWDEEEVRSLFGPYGDVEEVSIIRPKTNPGKGQKYGCAFVKYGAIQEAAA 67
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERL---------EHKLFIGMLPKNVSEAEVSAL 122
A+ K+T+ + PLQ++YA+GE ERL KLF+ +P +V +AE+ +
Sbjct: 68 AIQGMAGKQTVNENAGPLQIQYANGEPERLGLADDTEGVAQKLFVANVPADVDDAELKRV 127
Query: 123 FSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
FS YGT+ + ++ + AF+++ K L A++A+N K + P+ VK A+
Sbjct: 128 FSQYGTVTEAYCIQPRRPGGNRAAFVRFSKKSDGLRAIDALNEKFTFPNNDRPVAVKCAE 187
Query: 183 TEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRL 242
T ++R A R Q ++P + Q PS + GY P G ++G YG +
Sbjct: 188 TREQRDAHR------QDMDVPRSQQQQPSNRFSNDSGYGP-----GPTSTGGYGQRITPV 236
Query: 243 PPMQNQP 249
P QP
Sbjct: 237 PTAAAQP 243
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
Query: 100 RLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSK----GCAFLKYETKEQ 155
R+ KLF+G LP + E EV +LF YG ++++ I+R K GCAF+KY ++
Sbjct: 5 RIPVKLFVGKLPCDWDEEEVRSLFGPYGDVEEVSIIRPKTNPGKGQKYGCAFVKYGAIQE 64
Query: 156 ALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
A AA++ + GK + ++ PL +++A+ E ER
Sbjct: 65 AAAAIQGMAGKQTVNENAGPLQIQYANGEPER 96
>gi|340725300|ref|XP_003401010.1| PREDICTED: CUGBP Elav-like family member 4-like isoform 3 [Bombus
terrestris]
Length = 384
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 76/107 (71%), Gaps = 1/107 (0%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK AD E R + KLF+GML K +E +V LF+ +GTI++ ILRG +S+GCAF
Sbjct: 4 PIQVKPADSE-NRGDRKLFVGMLSKQQTEDDVRQLFTAFGTIEECTILRGPDGSSRGCAF 62
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
+K + ++ALAA+ ++G M G+S LVVK+ADTEKERQ RR Q+
Sbjct: 63 VKLSSHQEALAAINTLHGSQTMPGASSSLVVKFADTEKERQLRRMQQ 109
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K TE + +F F ++E I++ +SRGC FV S QEA A+N
Sbjct: 19 KLFVGMLSKQQTEDDVRQLFTAFGTIEECTILRGPDG-SSRGCAFVKLSSHQEALAAINT 77
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD E ER ++
Sbjct: 78 LHGSQTMPGASSSLVVKFADTEKERQLRRM 107
>gi|432116895|gb|ELK37482.1| CUGBP Elav-like family member 5 [Myotis davidii]
Length = 426
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 104/216 (48%), Gaps = 55/216 (25%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F++F + E+ ++KD T +G
Sbjct: 5 DAIKLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKG--------------- 49
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+ KLF+GML K SE +V LF +G I +
Sbjct: 50 -----------------------------DRKLFVGMLNKQQSEEDVLRLFQPFGVIDEC 80
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192
+LRG +SKGCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 81 TVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 140
Query: 193 QKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYG 228
Q+ Q L PSL LP PY+ Y
Sbjct: 141 QQMVGQLGIL------TPSL--TLPFS---PYSAYA 165
>gi|340725296|ref|XP_003401008.1| PREDICTED: CUGBP Elav-like family member 4-like isoform 1 [Bombus
terrestris]
Length = 373
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 76/107 (71%), Gaps = 1/107 (0%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK AD E R + KLF+GML K +E +V LF+ +GTI++ ILRG +S+GCAF
Sbjct: 4 PIQVKPADSE-NRGDRKLFVGMLSKQQTEDDVRQLFTAFGTIEECTILRGPDGSSRGCAF 62
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
+K + ++ALAA+ ++G M G+S LVVK+ADTEKERQ RR Q+
Sbjct: 63 VKLSSHQEALAAINTLHGSQTMPGASSSLVVKFADTEKERQLRRMQQ 109
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K TE + +F F ++E I++ +SRGC FV S QEA A+N
Sbjct: 19 KLFVGMLSKQQTEDDVRQLFTAFGTIEECTILRGPDG-SSRGCAFVKLSSHQEALAAINT 77
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD E ER ++
Sbjct: 78 LHGSQTMPGASSSLVVKFADTEKERQLRRM 107
>gi|357511413|ref|XP_003625995.1| FCA-like protein [Medicago truncatula]
gi|355501010|gb|AES82213.1| FCA-like protein [Medicago truncatula]
Length = 569
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 107/190 (56%), Gaps = 22/190 (11%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VK++V VP+ +EA + +F+ + + EV +++DK T +G C V + EAD A+
Sbjct: 74 VKVYVAPVPRTASEADVRLVFQGYGTIVEVVLLRDKATGVRQGSCLVKYSTFDEADMAIK 133
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---------LEH--------KLFIGMLPKNVSEA 117
A N+ T PG SSP+ V++AD + ER +E K+++G + S+
Sbjct: 134 ALSNQYTFPGESSPVVVRFADRKRERFGLRDFCQNMERRDPPEVVGKVYVGCINNEASKQ 193
Query: 118 EVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLV 177
E+ +FS YG I+D+ +LR ++G F+K+ +E ALAA++ ++ M G PL+
Sbjct: 194 EIEEIFSPYGHIEDVVVLR-----NRGYGFVKFYNREMALAAIKGLDRTFTMRGCDQPLI 248
Query: 178 VKWADTEKER 187
V++A+ +K R
Sbjct: 249 VRFAEPKKPR 258
>gi|302832507|ref|XP_002947818.1| hypothetical protein VOLCADRAFT_88093 [Volvox carteri f.
nagariensis]
gi|300267166|gb|EFJ51351.1| hypothetical protein VOLCADRAFT_88093 [Volvox carteri f.
nagariensis]
Length = 1966
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 110/201 (54%), Gaps = 19/201 (9%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
+LFVG VP+ EA L F++ +V ++ +++D+T+ SRGC FV + +EA+ A+
Sbjct: 31 RLFVGSVPRTAVEATLREYFEQCGVVRDLAVLRDRTSGKSRGCAFVSYLTLEEAEAAIQK 90
Query: 76 CHNKKTLPGASSPLQVKYAD-------GELERLEHKLFIGMLPKNV--------SEAEVS 120
+ LPG+ +PL+V++A GE ++F +P + E E+
Sbjct: 91 FDRQLMLPGSQTPLEVRFAKNHSYVQAGEGPSGNRQIFFSRVPLTLKVCHHVAYEEDEIL 150
Query: 121 ALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVK 179
+LF YG ++ + + + + SKGC F++ T+E A+AA+E ++ +H + + + V+
Sbjct: 151 SLFLAYGEVETINVFKCRRSGRSKGCGFIEMRTREAAIAAMENLDERHVFDSTGTAISVR 210
Query: 180 WADTEKERQARRAQKAQSQAN 200
WAD + + +R +KA AN
Sbjct: 211 WADPDLQ---QRKKKAMDDAN 228
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
Query: 16 KLFVGQVPKHMT--------EAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQ 67
++F +VP + E ++L++F + V+ +N+ K + + S+GC F+ +R+
Sbjct: 126 QIFFSRVPLTLKVCHHVAYEEDEILSLFLAYGEVETINVFKCRRSGRSKGCGFIEMRTRE 185
Query: 68 EADKAVNACHNKKTLPGASSPLQVKYADGELERLEHK-----------LFIGMLPKNVSE 116
A A+ + + + V++AD +L++ + K LF + ++ +E
Sbjct: 186 AAIAAMENLDERHVFDSTGTAISVRWADPDLQQRKKKAMDDANAENRMLFFAKVLRSTTE 245
Query: 117 AEVSALFSIYGTIKDLQILRGSQ--QTSKGCAFLKYETKEQALAALEAINGKHKMEGSSV 174
+V LFS +G + D+ + R Q T+KGC + A+AA+ A++G H EG
Sbjct: 246 DDVRRLFSRFGKVYDINLFRAFQGAPTTKGCGLVTMSQHSDAVAAIAALDGIHVWEGMDC 305
Query: 175 PLVVKWADTEKERQARRAQKAQSQANNLPNA 205
P+VVKW DT +R+ R A + LP++
Sbjct: 306 PMVVKWMDTALQRRRREQHLANIRQTPLPSS 336
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 103 HKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALE 161
H+LF+G +P+ EA + F G ++DL +LR + S+GCAF+ Y T E+A AA++
Sbjct: 30 HRLFVGSVPRTAVEATLREYFEQCGVVRDLAVLRDRTSGKSRGCAFVSYLTLEEAEAAIQ 89
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQA 189
+ + + GS PL V++A QA
Sbjct: 90 KFDRQLMLPGSQTPLEVRFAKNHSYVQA 117
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLF+G +P+ TE LLA+F+ V E+ I+ DK TR +G FV +R++A++A+
Sbjct: 521 VKLFIGNIPRGCTEKHLLALFQSIGKVVELVIMYDKVTREPKGSAFVWYATREDAERAIL 580
Query: 75 ACHNKKTLPGAS----SPLQVKYADGELERL 101
+ + P S PL V+ A R+
Sbjct: 581 QFNLRPVFPDPSGAQDRPLVVRKAKARSSRM 611
Score = 44.7 bits (104), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 5/107 (4%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEA 162
KLFIG +P+ +E + ALF G + +L I+ + KG AF+ Y T+E A A+
Sbjct: 522 KLFIGNIPRGCTEKHLLALFQSIGKVVELVIMYDKVTREPKGSAFVWYATREDAERAILQ 581
Query: 163 INGKHKMEGSS----VPLVVKWADTEKERQARRAQKAQSQANNLPNA 205
N + S PLVV+ A R A + A L A
Sbjct: 582 FNLRPVFPDPSGAQDRPLVVRKAKARSSRMVVSAASMYAAATTLGQA 628
>gi|30690648|ref|NP_850472.1| flowering time control protein-like protein [Arabidopsis thaliana]
gi|50897178|gb|AAT85728.1| At2g47310 [Arabidopsis thaliana]
gi|53793649|gb|AAU93571.1| At2g47310 [Arabidopsis thaliana]
gi|110738579|dbj|BAF01215.1| putative FCA-related protein [Arabidopsis thaliana]
gi|330255732|gb|AEC10826.1| flowering time control protein-like protein [Arabidopsis thaliana]
Length = 512
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 102/181 (56%), Gaps = 9/181 (4%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KL+V + K TE + +F+++ V E+ + KDK T CF+ +E + A+ A
Sbjct: 111 KLYVAPISKTATEYDIRQVFEKYGNVTEIILPKDKMTGERAAYCFIKYKKVEEGNAAIAA 170
Query: 76 CHNKKTLPGASSPLQVKYADGELERL---------EHKLFIGMLPKNVSEAEVSALFSIY 126
+ T PG P++V++A+ E ER+ KL++ L K ++ EV+ +FS Y
Sbjct: 171 LTEQFTFPGEMLPVKVRFAEAERERIGFAPVQLPDNPKLYVRCLNKQTTKMEVNEVFSRY 230
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 186
G I+D+ + + +G AF+++ KE ALAA++A+NG + GS PL+V++AD +K
Sbjct: 231 GIIEDIYMALDDMKICRGYAFVQFSCKEMALAAIKALNGLFTIRGSDQPLIVRFADPKKP 290
Query: 187 R 187
R
Sbjct: 291 R 291
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KL+V + K T+ ++ +F + +++++ + D + RG FV ++ A A+ A
Sbjct: 208 KLYVRCLNKQTTKMEVNEVFSRYGIIEDIYMALDDM-KICRGYAFVQFSCKEMALAAIKA 266
Query: 76 CHNKKTLPGASSPLQVKYADGELERL 101
+ T+ G+ PL V++AD + RL
Sbjct: 267 LNGLFTIRGSDQPLIVRFADPKKPRL 292
>gi|194385422|dbj|BAG65088.1| unnamed protein product [Homo sapiens]
gi|194389686|dbj|BAG61804.1| unnamed protein product [Homo sapiens]
Length = 159
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 88/137 (64%), Gaps = 4/137 (2%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEADKA 72
+K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A +A
Sbjct: 16 IKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEA 75
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
NA HN KTLPG P+Q+K AD E + KLFIGM+ K +E ++ +FS +G I+
Sbjct: 76 QNALHNIKTLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIE 135
Query: 131 DLQILRGSQQTSKGCAF 147
+ +ILRG S+G F
Sbjct: 136 ECRILRGPDGLSRGLLF 152
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAAL 160
K+F+G +P++ SE E+ LF YG + + +LR Q SKGC F+ + T++ AL A
Sbjct: 17 KMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 76
Query: 161 EAINGKHKMEGSSVPLVVKWADTEK 185
A++ + G P+ +K AD+EK
Sbjct: 77 NALHNIKTLPGMHHPIQMKPADSEK 101
>gi|2275209|gb|AAB63831.1| putative FCA-related protein [Arabidopsis thaliana]
Length = 324
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 102/185 (55%), Gaps = 13/185 (7%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KL+V + K TE + +F+++ V E+ + KDK T CF+ +E + A+ A
Sbjct: 111 KLYVAPISKTATEYDIRQVFEKYGNVTEIILPKDKMTGERAAYCFIKYKKVEEGNAAIAA 170
Query: 76 CHNKKTLPGASSPLQVKYADGELERL-------------EHKLFIGMLPKNVSEAEVSAL 122
+ T PG P++V++A+ E ER+ KL++ L K ++ EV+ +
Sbjct: 171 LTEQFTFPGEMLPVKVRFAEAERERIGKCRCFAPVQLPDNPKLYVRCLNKQTTKMEVNEV 230
Query: 123 FSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
FS YG I+D+ + + +G AF+++ KE ALAA++A+NG + GS PL+V++AD
Sbjct: 231 FSRYGIIEDIYMALDDMKICRGYAFVQFSCKEMALAAIKALNGLFTIRGSDQPLIVRFAD 290
Query: 183 TEKER 187
+K R
Sbjct: 291 PKKPR 295
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KL+V + K T+ ++ +F + +++++ + D + RG FV ++ A A+ A
Sbjct: 212 KLYVRCLNKQTTKMEVNEVFSRYGIIEDIYMALDDM-KICRGYAFVQFSCKEMALAAIKA 270
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKLFIGML 110
+ T+ G+ PL V++AD + RL + F L
Sbjct: 271 LNGLFTIRGSDQPLIVRFADPKKPRLGEQRFYSFL 305
>gi|198463676|ref|XP_002135559.1| bruno-3 [Drosophila pseudoobscura pseudoobscura]
gi|198151365|gb|EDY74186.1| bruno-3 [Drosophila pseudoobscura pseudoobscura]
Length = 421
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 88/144 (61%), Gaps = 5/144 (3%)
Query: 64 PSRQEADKAVNACHNKKTLPGA---SSPLQVKYADGEL--ERLEHKLFIGMLPKNVSEAE 118
P + A + +CH+ P + LQ+K A+ E E L+ KLF+GML K +E +
Sbjct: 11 PKVEFAQQVTVSCHHPLIPPAIKLMNRALQLKPAENESRSEHLDRKLFVGMLSKQQTEDD 70
Query: 119 VSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVV 178
V +F +G+I++ ILRG TSKGCAF+K+ T+++A +A+ ++G M G+S LVV
Sbjct: 71 VRQIFHPFGSIEECTILRGPDGTSKGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVV 130
Query: 179 KWADTEKERQARRAQKAQSQANNL 202
K+ADTEKERQ RR Q+ N L
Sbjct: 131 KYADTEKERQIRRMQQMAGHMNLL 154
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 44 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 100
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 101 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 139
>gi|269868146|gb|ACZ52379.1| Bruno-3 transcript variant 6 [Drosophila pseudoobscura]
Length = 395
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 88/144 (61%), Gaps = 5/144 (3%)
Query: 64 PSRQEADKAVNACHNKKTLPGA---SSPLQVKYADGEL--ERLEHKLFIGMLPKNVSEAE 118
P + A + +CH+ P + LQ+K A+ E E L+ KLF+GML K +E +
Sbjct: 11 PKVEFAQQVTVSCHHPLIPPAIKLMNRALQLKPAENESRSEHLDRKLFVGMLSKQQTEDD 70
Query: 119 VSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVV 178
V +F +G+I++ ILRG TSKGCAF+K+ T+++A +A+ ++G M G+S LVV
Sbjct: 71 VRQIFHPFGSIEECTILRGPDGTSKGCAFVKFGTQQEAQSAIANLHGSQTMPGASSSLVV 130
Query: 179 KWADTEKERQARRAQKAQSQANNL 202
++ADTEKERQ RR Q+ N L
Sbjct: 131 RYADTEKERQIRRMQQTAGHMNLL 154
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 44 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 100
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L V+YAD E ER
Sbjct: 101 KFGTQQEAQSAIANLHGSQTMPGASSSLVVRYADTEKER 139
>gi|145306684|gb|ABP57106.1| CUG-BP and ETR-3-like factor 4 isoform 2 [Gallus gallus]
Length = 371
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 73/113 (64%)
Query: 86 SSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGC 145
+ P+QVK AD E + KLF+GML K SE +V LF +G I++ ILRG SKGC
Sbjct: 2 ARPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGC 61
Query: 146 AFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
AF+KY + +A AA+ A++G M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 62 AFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQ 114
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ +S E KLFVG + K +E + +F+ F ++E I++ S+GC FV S
Sbjct: 11 DSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGN-SKGCAFVKYSSH 69
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
EA A+NA H +T+PGASS L VK+AD + ER ++
Sbjct: 70 AEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRM 108
>gi|444724379|gb|ELW64984.1| CUGBP Elav-like family member 2 [Tupaia chinensis]
Length = 585
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 110/197 (55%), Gaps = 21/197 (10%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGC------------ 58
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+G
Sbjct: 98 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGLKSEPQKLELEAL 157
Query: 59 --CFVICPSR---QEADKAVNACHNKKTLPGASSPLQVKYADGELERL--EHKLFIGMLP 111
C + PS+ +++ K P+Q+K AD E + KLFIGM+
Sbjct: 158 SKCGLSDPSKAFGMALIRSLTDIDGSKKKDKMHHPIQMKPADSEKSNAVEDRKLFIGMVS 217
Query: 112 KNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEG 171
K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++A++ MEG
Sbjct: 218 KKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEG 277
Query: 172 SSVPLVVKWADTEKERQ 188
S P+VVK+ADT+K+++
Sbjct: 278 CSSPIVVKFADTQKDKE 294
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 195 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAF 253
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 254 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 293
>gi|426368243|ref|XP_004051120.1| PREDICTED: CUGBP Elav-like family member 1 [Gorilla gorilla
gorilla]
Length = 551
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 95/181 (52%), Gaps = 45/181 (24%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 124 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 183
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
+A NA HN K LPG P+Q+K AD E KN
Sbjct: 184 EAQNALHNMKVLPGMHHPIQMKPADSE--------------KN----------------- 212
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++ +
Sbjct: 213 ------------NGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQK 260
Query: 191 R 191
R
Sbjct: 261 R 261
>gi|145306682|gb|ABP57105.1| CUG-BP and ETR-3-like factor 4 isoform 1 [Gallus gallus]
Length = 351
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 73/113 (64%)
Query: 86 SSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGC 145
+ P+QVK AD E + KLF+GML K SE +V LF +G I++ ILRG SKGC
Sbjct: 2 ARPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGC 61
Query: 146 AFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
AF+KY + +A AA+ A++G M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 62 AFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQ 114
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ +S E KLFVG + K +E + +F+ F ++E I++ S+GC FV S
Sbjct: 11 DSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGN-SKGCAFVKYSSH 69
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
EA A+NA H +T+PGASS L VK+AD + ER ++
Sbjct: 70 AEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRM 108
>gi|64213752|gb|AAY41232.1| RLS [synthetic construct]
Length = 175
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 77/112 (68%), Gaps = 3/112 (2%)
Query: 79 KKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQIL 135
+ TLPGA P+QV+YADGE ER +EHKLF+ L K + E+ +F+ YG ++D+ I+
Sbjct: 16 RYTLPGAMGPIQVRYADGERERHGAIEHKLFVASLNKQATAKEIEEIFAPYGHVEDVYIM 75
Query: 136 RGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
+ + S+GC F+K+ ++E ALAA+ A++G + M G PL++++AD ++ R
Sbjct: 76 KDGMRQSRGCGFVKFSSREPALAAMSALSGNYVMRGCEQPLIIRFADPKRPR 127
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Query: 2 AESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFV 61
A+ ++E+ + E KLFV + K T ++ +F + V++V I+KD R SRGC FV
Sbjct: 31 ADGERERHGAIEH-KLFVASLNKQATAKEIEEIFAPYGHVEDVYIMKD-GMRQSRGCGFV 88
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYAD 95
SR+ A A++A + G PL +++AD
Sbjct: 89 KFSSREPALAAMSALSGNYVMRGCEQPLIIRFAD 122
>gi|149022604|gb|EDL79498.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_c [Rattus
norvegicus]
Length = 478
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 97/179 (54%), Gaps = 40/179 (22%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQVP+ +E L +F+++ V E+NI++D++
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRS--------------------- 52
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+P Q K + + KLFIGM+ K +E ++ +FS +G I++
Sbjct: 53 -------------QNPPQSKAVE------DRKLFIGMISKKCTENDIRVMFSSFGQIEEC 93
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++ +R
Sbjct: 94 RILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKR 152
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ K+ E+R KLF+G + K TE + MF F ++E I++ SRGC FV +R
Sbjct: 57 QSKAVEDR-KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAFVTFTTR 114
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 115 TMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 153
>gi|24663908|ref|NP_729923.1| bruno-3, isoform A [Drosophila melanogaster]
gi|194870535|ref|XP_001972671.1| GG13757 [Drosophila erecta]
gi|195327422|ref|XP_002030418.1| GM24582 [Drosophila sechellia]
gi|195494162|ref|XP_002094720.1| GE20053 [Drosophila yakuba]
gi|16648344|gb|AAL25437.1| LD31834p [Drosophila melanogaster]
gi|23093534|gb|AAF49798.2| bruno-3, isoform A [Drosophila melanogaster]
gi|190654454|gb|EDV51697.1| GG13757 [Drosophila erecta]
gi|194119361|gb|EDW41404.1| GM24582 [Drosophila sechellia]
gi|194180821|gb|EDW94432.1| GE20053 [Drosophila yakuba]
gi|220945994|gb|ACL85540.1| bru-3-PA [synthetic construct]
gi|220955812|gb|ACL90449.1| bru-3-PA [synthetic construct]
Length = 422
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 87/144 (60%), Gaps = 5/144 (3%)
Query: 64 PSRQEADKAVNACHNKKTLPGA---SSPLQVKYADGEL--ERLEHKLFIGMLPKNVSEAE 118
P + A + +CH+ P + LQ+K A+ E E L+ KLF+GML K +E +
Sbjct: 11 PKVEFAQQVTVSCHHPLIPPAIKLMNRALQLKPAENESRSEHLDRKLFVGMLSKQQTEDD 70
Query: 119 VSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVV 178
V +F +GTI++ ILRG SKGCAF+K+ ++++A +A+ ++G M G+S LVV
Sbjct: 71 VRQIFHPFGTIEECTILRGPDGASKGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVV 130
Query: 179 KWADTEKERQARRAQKAQSQANNL 202
K+ADTEKERQ RR Q+ N L
Sbjct: 131 KYADTEKERQIRRMQQMAGHMNLL 154
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 44 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 102
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 103 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 139
>gi|148695565|gb|EDL27512.1| CUG triplet repeat, RNA binding protein 1, isoform CRA_a [Mus
musculus]
Length = 478
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 97/179 (54%), Gaps = 40/179 (22%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQVP+ +E L +F+++ V E+NI++D++
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRS--------------------- 52
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+P Q K + + KLFIGM+ K +E ++ +FS +G I++
Sbjct: 53 -------------QNPPQSKAVE------DRKLFIGMISKKCTENDIRVMFSSFGQIEEC 93
Query: 133 QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
+ILRG S+GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++ +R
Sbjct: 94 RILRGPDGLSRGCAFVTFTTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKR 152
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ K+ E+R KLF+G + K TE + MF F ++E I++ SRGC FV +R
Sbjct: 57 QSKAVEDR-KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDG-LSRGCAFVTFTTR 114
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A A+ A H +T+ G SSP+ VK+AD + ++ + ++
Sbjct: 115 TMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRM 153
>gi|194752425|ref|XP_001958523.1| GF10965 [Drosophila ananassae]
gi|190625805|gb|EDV41329.1| GF10965 [Drosophila ananassae]
Length = 422
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 87/144 (60%), Gaps = 5/144 (3%)
Query: 64 PSRQEADKAVNACHNKKTLPGA---SSPLQVKYADGEL--ERLEHKLFIGMLPKNVSEAE 118
P + A + +CH+ P + LQ+K A+ E E L+ KLF+GML K +E +
Sbjct: 11 PKVEFAQQVTVSCHHPLIPPAIKLMNRALQLKPAENESRSEHLDRKLFVGMLSKQQTEDD 70
Query: 119 VSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVV 178
V +F +GTI++ ILRG SKGCAF+K+ ++++A +A+ ++G M G+S LVV
Sbjct: 71 VRQIFHPFGTIEECTILRGPDGASKGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVV 130
Query: 179 KWADTEKERQARRAQKAQSQANNL 202
K+ADTEKERQ RR Q+ N L
Sbjct: 131 KYADTEKERQIRRMQQMAGHMNLL 154
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 44 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 102
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 103 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 139
>gi|195020121|ref|XP_001985125.1| GH14684 [Drosophila grimshawi]
gi|195378885|ref|XP_002048212.1| GJ13842 [Drosophila virilis]
gi|193898607|gb|EDV97473.1| GH14684 [Drosophila grimshawi]
gi|194155370|gb|EDW70554.1| GJ13842 [Drosophila virilis]
Length = 421
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 87/144 (60%), Gaps = 5/144 (3%)
Query: 64 PSRQEADKAVNACHNKKTLPGA---SSPLQVKYADGEL--ERLEHKLFIGMLPKNVSEAE 118
P + A + +CH+ P + LQ+K A+ E E L+ KLF+GML K +E +
Sbjct: 11 PKVEFAQQVTVSCHHPLIPPAIKLMNRALQLKPAENESRSEHLDRKLFVGMLSKQQTEDD 70
Query: 119 VSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVV 178
V +F +GTI++ ILRG SKGCAF+K+ ++++A +A+ ++G M G+S LVV
Sbjct: 71 VRQIFHPFGTIEECTILRGPDGASKGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVV 130
Query: 179 KWADTEKERQARRAQKAQSQANNL 202
K+ADTEKERQ RR Q+ N L
Sbjct: 131 KYADTEKERQIRRMQQMAGHMNLL 154
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 44 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 102
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 103 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 139
>gi|320545823|ref|NP_001189090.1| bruno-3, isoform C [Drosophila melanogaster]
gi|318069191|gb|ADV37526.1| bruno-3, isoform C [Drosophila melanogaster]
Length = 396
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 87/144 (60%), Gaps = 5/144 (3%)
Query: 64 PSRQEADKAVNACHNKKTLPGA---SSPLQVKYADGEL--ERLEHKLFIGMLPKNVSEAE 118
P + A + +CH+ P + LQ+K A+ E E L+ KLF+GML K +E +
Sbjct: 11 PKVEFAQQVTVSCHHPLIPPAIKLMNRALQLKPAENESRSEHLDRKLFVGMLSKQQTEDD 70
Query: 119 VSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVV 178
V +F +GTI++ ILRG SKGCAF+K+ ++++A +A+ ++G M G+S LVV
Sbjct: 71 VRQIFHPFGTIEECTILRGPDGASKGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVV 130
Query: 179 KWADTEKERQARRAQKAQSQANNL 202
K+ADTEKERQ RR Q+ N L
Sbjct: 131 KYADTEKERQIRRMQQMAGHMNLL 154
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 44 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 102
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 103 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 139
>gi|148699458|gb|EDL31405.1| mCG145499 [Mus musculus]
Length = 376
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/121 (46%), Positives = 76/121 (62%)
Query: 82 LPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQT 141
LP + P+QVK AD E + KLF+GML K SE +V LF +G I + +LRG +
Sbjct: 56 LPKMARPIQVKPADSESRGGDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGS 115
Query: 142 SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANN 201
SKGCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 116 SKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGI 175
Query: 202 L 202
L
Sbjct: 176 L 176
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV S EA A++A
Sbjct: 78 KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKFSSHTEAQAAIHA 136
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD + ER ++
Sbjct: 137 LHGSQTMPGASSSLVVKFADTDKERTLRRM 166
>gi|170592252|ref|XP_001900883.1| RNA recognition motif. [Brugia malayi]
gi|158591750|gb|EDP30354.1| RNA recognition motif [Brugia malayi]
Length = 487
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 84/131 (64%), Gaps = 1/131 (0%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ E + +F++F V ++N+++DK T+ SRGCCFV R +A A
Sbjct: 20 DAIKMFVGQIPRSWGETECRELFEQFGSVCQLNVLRDKVTQTSRGCCFVTYYKRADAIAA 79
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
A HN + LP P+Q+K AD E R E KLFIGML K ++E +V +F+ +G I+D
Sbjct: 80 QAALHNIRVLPQMYHPVQMKPADIE-NRNERKLFIGMLNKKLTEDDVREMFAQFGHIEDC 138
Query: 133 QILRGSQQTSK 143
+L+ S+ S+
Sbjct: 139 TVLKDSEGKSR 149
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEA 162
K+F+G +P++ E E LF +G++ L +LR QTS+GC F+ Y + A+AA A
Sbjct: 23 KMFVGQIPRSWGETECRELFEQFGSVCQLNVLRDKVTQTSRGCCFVTYYKRADAIAAQAA 82
Query: 163 INGKHKMEGSSVPLVVKWADTEKERQAR 190
++ + P+ +K AD E + +
Sbjct: 83 LHNIRVLPQMYHPVQMKPADIENRNERK 110
>gi|432881561|ref|XP_004073841.1| PREDICTED: CUGBP Elav-like family member 3-like [Oryzias latipes]
Length = 374
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 77/111 (69%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK AD E + KLF+GML K ++A+V +F +G+I++ +LRG TSKGCAF
Sbjct: 4 PIQVKPADSESRGEDRKLFVGMLGKQQTDADVRKMFEPFGSIEECTVLRGPDGTSKGCAF 63
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
+K+++ +A AA+ A++G + G+S LVVK+AD+EKER RR Q+ SQ
Sbjct: 64 VKFQSNAEAQAAINALHGSRTLPGASSSLVVKFADSEKERGLRRMQQVASQ 114
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 58/96 (60%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+A + MF+ F ++E +++ D T S+GC FV
Sbjct: 11 DSESRGEDRKLFVGMLGKQQTDADVRKMFEPFGSIEECTVLRGPDGT---SKGCAFVKFQ 67
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S EA A+NA H +TLPGASS L VK+AD E ER
Sbjct: 68 SNAEAQAAINALHGSRTLPGASSSLVVKFADSEKER 103
>gi|269868138|gb|ACZ52375.1| Bruno-3 transcript variant 4 [Drosophila pseudoobscura]
Length = 407
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +G+I++ ILRG TSKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|269868144|gb|ACZ52378.1| Bruno-3 transcript variant 5 [Drosophila pseudoobscura]
Length = 401
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +G+I++ ILRG TSKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|269868184|gb|ACZ52398.1| Bruno-3 transcript variant 9 [Drosophila pseudoobscura]
Length = 381
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +G+I++ ILRG TSKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|269868178|gb|ACZ52395.1| Bruno-3 transcript variant 5 [Drosophila pseudoobscura]
Length = 401
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +G+I++ ILRG TSKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|195126493|ref|XP_002007705.1| GI13095 [Drosophila mojavensis]
gi|193919314|gb|EDW18181.1| GI13095 [Drosophila mojavensis]
Length = 611
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 87/144 (60%), Gaps = 5/144 (3%)
Query: 64 PSRQEADKAVNACHNKKTLPGA---SSPLQVKYADGEL--ERLEHKLFIGMLPKNVSEAE 118
P + A + +CH+ P + LQ+K A+ E E L+ KLF+GML K +E +
Sbjct: 11 PKVEFAQQVTVSCHHPLIPPAIKLMNRALQLKPAENESRSEHLDRKLFVGMLSKQQTEDD 70
Query: 119 VSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVV 178
V +F +GTI++ ILRG SKGCAF+K+ ++++A +A+ ++G M G+S LVV
Sbjct: 71 VRQIFHPFGTIEECTILRGPDGASKGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVV 130
Query: 179 KWADTEKERQARRAQKAQSQANNL 202
K+ADTEKERQ RR Q+ N L
Sbjct: 131 KYADTEKERQIRRMQQMAGHMNLL 154
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 44 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 102
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 103 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 139
>gi|302830592|ref|XP_002946862.1| hypothetical protein VOLCADRAFT_72841 [Volvox carteri f.
nagariensis]
gi|300267906|gb|EFJ52088.1| hypothetical protein VOLCADRAFT_72841 [Volvox carteri f.
nagariensis]
Length = 450
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 102/177 (57%), Gaps = 12/177 (6%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
K+FVGQVP +T+ Q+ A+F ++ + + +I + R S+GC V EA+ A+
Sbjct: 16 KVFVGQVPHEVTQDQVFALFSKYGTIKKCALITGQDGR-SKGCAMVTYDRWAEAELAIEH 74
Query: 76 CHNKKTLPGASSPLQVKYADGELERLE--------HKLFIGMLPKNVSEAEVSALFSIYG 127
+ L G + L VK+AD R + KLF+G +P++ +E + LF+ YG
Sbjct: 75 ENGTANLGGGRT-LLVKFADPPRGRGDGPVMGVAPKKLFVGQIPQHTTEQHIRTLFAAYG 133
Query: 128 TIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
TI D+ +L ++ + GCAF+ +E QA A+ ++NG+ +EG++ P+VVK+AD +
Sbjct: 134 TITDVHVL--NKGNAPGCAFVTFERWSQAENAMLSLNGQTLIEGATTPMVVKFADAK 188
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
E K+F+G +P V++ +V ALFS YGTIK ++ G SKGCA + Y+ +A A+E
Sbjct: 14 EPKVFVGQVPHEVTQDQVFALFSKYGTIKKCALITGQDGRSKGCAMVTYDRWAEAELAIE 73
Query: 162 AINGKHKMEGSSVPLVVKWADTEKER 187
NG + G L+VK+AD + R
Sbjct: 74 HENGTANLGGGRT-LLVKFADPPRGR 98
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAI 163
KLFIG +P +EA++ +FS G I +L ILR Q SKGCAFL YE + A A+ +
Sbjct: 361 KLFIGQVPFEANEADLWPIFSPLGNILELVILR-HQGKSKGCAFLTYENRTDAEKAIRTL 419
Query: 164 NGKHKMEGSSVP----LVVKWADT 183
+ + + +S P L VK+A+T
Sbjct: 420 DSQVSV--TSDPRGRLLTVKYANT 441
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLF+GQVP EA L +F + E+ I++ + S+GC F+ +R +A+KA+
Sbjct: 361 KLFIGQVPFEANEADLWPIFSPLGNILELVILRHQGK--SKGCAFLTYENRTDAEKAIRT 418
Query: 76 CHNKKTLPGASSP----LQVKYAD 95
++ ++ S P L VKYA+
Sbjct: 419 LDSQVSV--TSDPRGRLLTVKYAN 440
>gi|269868140|gb|ACZ52376.1| Bruno-3 transcript variant 4 [Drosophila pseudoobscura]
Length = 407
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +G+I++ ILRG TSKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|269868152|gb|ACZ52382.1| Bruno-3 transcript variant 12 [Drosophila pseudoobscura]
Length = 375
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +G+I++ ILRG TSKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|269868216|gb|ACZ52414.1| Bruno-3 transcript variant 9, partial [Drosophila pseudoobscura]
Length = 370
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +G+I++ ILRG TSKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|269868182|gb|ACZ52397.1| Bruno-3 transcript variant 9 [Drosophila pseudoobscura]
Length = 381
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +G+I++ ILRG TSKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|269868214|gb|ACZ52413.1| Bruno-3 transcript variant 9, partial [Drosophila pseudoobscura]
Length = 370
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +G+I++ ILRG TSKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|269868142|gb|ACZ52377.1| Bruno-3 transcript variant 4 [Drosophila pseudoobscura]
Length = 407
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +G+I++ ILRG TSKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|269868307|gb|ACZ52458.1| Bruno-3 transcript variant 9 [Drosophila persimilis]
Length = 381
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +G+I++ ILRG TSKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|269868210|gb|ACZ52411.1| Bruno-3 transcript variant 9, partial [Drosophila pseudoobscura]
Length = 370
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +G+I++ ILRG TSKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|269868148|gb|ACZ52380.1| Bruno-3 transcript variant 9 [Drosophila pseudoobscura]
Length = 381
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +G+I++ ILRG TSKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|269868180|gb|ACZ52396.1| Bruno-3 transcript variant 9 [Drosophila pseudoobscura]
Length = 381
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +G+I++ ILRG TSKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|269868212|gb|ACZ52412.1| Bruno-3 transcript variant 9, partial [Drosophila pseudoobscura]
Length = 370
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +G+I++ ILRG TSKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|256078401|ref|XP_002575484.1| bruno-like rna binding protein [Schistosoma mansoni]
gi|350645920|emb|CCD59385.1| bruno-like rna binding protein [Schistosoma mansoni]
Length = 479
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 72/107 (67%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
PLQVK AD E E KLF+GML K +E +V LF +GTI++ ILR SKGCAF
Sbjct: 4 PLQVKTADMERRTEERKLFVGMLSKQQNEEDVRLLFEPFGTIEECTILRDQNGNSKGCAF 63
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
+K+ T+++A +A+ ++G M G+S +VVK+AD+EKER R+ Q+
Sbjct: 64 VKFSTQQEAQSAILTLHGSQTMPGASSSIVVKFADSEKERHTRKIQQ 110
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 2 AESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFV 61
++ ++ +EER KLFVG + K E + +F+ F ++E I++D+ S+GC FV
Sbjct: 7 VKTADMERRTEER-KLFVGMLSKQQNEEDVRLLFEPFGTIEECTILRDQNGN-SKGCAFV 64
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
++QEA A+ H +T+PGASS + VK+AD E ER K+
Sbjct: 65 KFSTQQEAQSAILTLHGSQTMPGASSSIVVKFADSEKERHTRKI 108
>gi|431917652|gb|ELK16917.1| CUG-BP- and ETR-3-like factor 2 [Pteropus alecto]
Length = 443
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 93/178 (52%), Gaps = 45/178 (25%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQ+P+ +E +L +F+ + V ++N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
+A NA HN KTLPG P+Q+K AD E
Sbjct: 74 EAQNALHNIKTLPGMHHPIQMKPADSE--------------------------------- 100
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
S GCAF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 101 ----------KSNGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 148
>gi|269868305|gb|ACZ52457.1| Bruno-3 transcript variant 4 [Drosophila persimilis]
Length = 407
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +G+I++ ILRG TSKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGTQQEAQSAIANLHGSQAMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H + +PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQAMPGASSSLVVKYADTEKER 125
>gi|307106109|gb|EFN54356.1| hypothetical protein CHLNCDRAFT_135626 [Chlorella variabilis]
Length = 466
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 134/284 (47%), Gaps = 32/284 (11%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
+LFVGQ+P TE L+ +F + +++V++++ + SRGCC V +A++A+
Sbjct: 15 RLFVGQIPTSCTEEDLVPVFAGYGEIEKVSLVRGPDNK-SRGCCMVQFKRWADAERAMLD 73
Query: 76 CHNKKTL-PGASSPLQVKYAD---------GELERLEHKLFIGMLPKNVSEAEVSALFSI 125
+ L G PL +A+ E KLF+G +PK EA++ A+F
Sbjct: 74 VNGTSPLESGKGRPLVCHFANPRRTMGSQMSETAIAPRKLFVGQIPKTSVEADILAVFGP 133
Query: 126 YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
+G ++ + IL+ S+ GCAF++Y + AA+EA++ K M G+ PLVVK+AD +K
Sbjct: 134 FGEVEQINILK-SKGVHAGCAFVQYSSWAACEAAIEALHDKTTMPGAEHPLVVKFADAKK 192
Query: 186 ERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPM 245
A QK + HP+L GA ++ + Y G G+ +P M
Sbjct: 193 S-DAGMMQK-RGLGMMGMGGFGAHPALLGA--------HHHHPYGDMGLPGMTHMAMPGM 242
Query: 246 QNQPGFHGIIPPVNQGNAMRGASPDLSSNMGPRNYAMPPSGFVG 289
G++ Q N + A+ + MG PSG G
Sbjct: 243 GGLGAMSGLL----QANGLSHAALGMGMGMG------LPSGLAG 276
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 53/80 (66%), Gaps = 3/80 (3%)
Query: 103 HKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEA 162
HKLFIG +P E ++ ALF+ G I +L ILR SQ SKGCAFL Y +++QA +A+ A
Sbjct: 384 HKLFIGQIPFEAIEQDLWALFAPAGDILELAILR-SQGRSKGCAFLTYASRQQATSAINA 442
Query: 163 INGKHKMEGSSVPLVVKWAD 182
NG+ G S LVVK+AD
Sbjct: 443 FNGRQV--GPSKRLVVKFAD 460
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLF+GQ+P E L A+F + E+ I++ + S+GC F+ SRQ+A A+NA
Sbjct: 385 KLFIGQIPFEAIEQDLWALFAPAGDILELAILRSQGR--SKGCAFLTYASRQQATSAINA 442
Query: 76 CHNKKTLPGASSPLQVKYAD 95
+ ++ P S L VK+AD
Sbjct: 443 FNGRQVGP--SKRLVVKFAD 460
>gi|269868303|gb|ACZ52456.1| Bruno-3 transcript variant 4 [Drosophila persimilis]
Length = 407
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +G+I++ ILRG TSKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGTQQEAQSAIVNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIVNLHGSQTMPGASSSLVVKYADTEKER 125
>gi|269868273|gb|ACZ52441.1| Bruno-3 transcript variant 5 [Drosophila virilis]
Length = 373
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 8 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 67
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 68 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRVQQMAGHMNLL 123
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 13 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 71
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 72 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 108
>gi|237836675|ref|XP_002367635.1| RNA recognition motif domain containing protein [Toxoplasma gondii
ME49]
gi|211965299|gb|EEB00495.1| RNA recognition motif domain containing protein [Toxoplasma gondii
ME49]
gi|221483936|gb|EEE22240.1| conserved hypothetical protein [Toxoplasma gondii GT1]
gi|221505218|gb|EEE30872.1| RNA-binding protein, putative [Toxoplasma gondii VEG]
Length = 230
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 98/187 (52%), Gaps = 30/187 (16%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVG++P +TE L +F +F + +V +I+D+ T A +GC FV S +AD+A+
Sbjct: 39 VKLFVGRLPLTVTEDILCTLFNQFGPIADVVLIRDRHTNAFKGCAFVTMQSITDADRAIR 98
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL---------------EHKLFIGMLPKNVSEAEV 119
+ L A LQVKYA GE ERL + KLF+G LP ++ E +
Sbjct: 99 HLDSAYVLDPALGGLQVKYAVGEAERLGLPGTSGSGAAAGVDQVKLFVGSLPPDIKEDAL 158
Query: 120 SALFSIYGTIKDLQIL---------------RGSQQTSKGCAFLKYETKEQALAALEAIN 164
LF +G ++++ ++ R +++ GCAF+++ KE+A A+ +N
Sbjct: 159 RDLFERFGRVEEVFLMKDEPGNGANLSGGAPRPGKKSRTGCAFVRFAYKEEAFFAISELN 218
Query: 165 GKHKMEG 171
GK M G
Sbjct: 219 GKVIMPG 225
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTS-KGCAFLKYETKEQALAALEA 162
KLF+G LP V+E + LF+ +G I D+ ++R + KGCAF+ ++ A A+
Sbjct: 40 KLFVGRLPLTVTEDILCTLFNQFGPIADVVLIRDRHTNAFKGCAFVTMQSITDADRAIRH 99
Query: 163 INGKHKMEGSSVPLVVKWADTEKER 187
++ + ++ + L VK+A E ER
Sbjct: 100 LDSAYVLDPALGGLQVKYAVGEAER 124
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 14/86 (16%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDK--------------TTRASRGC 58
++VKLFVG +P + E L +F+ F V+EV ++KD+ ++ GC
Sbjct: 140 DQVKLFVGSLPPDIKEDALRDLFERFGRVEEVFLMKDEPGNGANLSGGAPRPGKKSRTGC 199
Query: 59 CFVICPSRQEADKAVNACHNKKTLPG 84
FV ++EA A++ + K +PG
Sbjct: 200 AFVRFAYKEEAFFAISELNGKVIMPG 225
>gi|269868277|gb|ACZ52443.1| Bruno-3 transcript variant 5 [Drosophila virilis]
Length = 372
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 7 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 66
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 67 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRVQQMAGHMNLL 122
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 12 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 70
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 71 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 107
>gi|269868275|gb|ACZ52442.1| Bruno-3 transcript variant 5 [Drosophila virilis]
Length = 372
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 7 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 66
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 67 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRVQQMAGHMNLL 122
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 12 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 70
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 71 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 107
>gi|269868231|gb|ACZ52420.1| Bruno-3 transcript variant 3 [Drosophila melanogaster]
Length = 388
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 8 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 67
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 68 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 123
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 13 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 71
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALF 123
S+QEA A+ H +T+PGASS L VKYAD E ER ++ N+ V F
Sbjct: 72 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLLNPFVFNQF 131
Query: 124 SIYGTIKDL 132
S YG L
Sbjct: 132 SPYGAYAQL 140
>gi|426386618|ref|XP_004059780.1| PREDICTED: CUGBP Elav-like family member 5 isoform 2 [Gorilla
gorilla gorilla]
Length = 370
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 82/140 (58%), Gaps = 11/140 (7%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK AD E + KLF+GML K SE +V LF +G I + +LRG +SKGCAF
Sbjct: 4 PIQVKPADSESRGGDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAF 63
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS 207
+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR Q+ Q L
Sbjct: 64 VKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIL----- 118
Query: 208 QHPSLFGALPMGYAPPYNGY 227
PSL LP PY+ Y
Sbjct: 119 -TPSL--TLPFS---PYSAY 132
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV S EA A++A
Sbjct: 20 KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKFSSHTEAQAAIHA 78
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD + ER ++
Sbjct: 79 LHGSQTMPGASSSLVVKFADTDKERTLRRM 108
>gi|269868267|gb|ACZ52438.1| Bruno-3 transcript variant 4 [Drosophila virilis]
gi|269868269|gb|ACZ52439.1| Bruno-3 transcript variant 4 [Drosophila virilis]
Length = 379
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 8 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 67
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 68 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 123
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 13 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 71
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 72 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 108
>gi|269868265|gb|ACZ52437.1| Bruno-3 transcript variant 4 [Drosophila virilis]
Length = 379
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 8 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 67
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 68 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 123
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 13 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 71
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 72 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 108
>gi|269868237|gb|ACZ52423.1| Bruno-3 transcript variant 7, partial [Drosophila melanogaster]
Length = 362
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 8 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 67
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 68 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 123
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 13 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 71
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALF 123
S+QEA A+ H +T+PGASS L VKYAD E ER ++ N+ V F
Sbjct: 72 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLLNPFVFNQF 131
Query: 124 SIYGTIKDL 132
S YG L
Sbjct: 132 SPYGAYAQL 140
>gi|269868235|gb|ACZ52422.1| Bruno-3 transcript variant 4 [Drosophila melanogaster]
Length = 380
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 8 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 67
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 68 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 123
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 13 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 71
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 72 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 108
>gi|269868271|gb|ACZ52440.1| Bruno-3 transcript variant 4 [Drosophila virilis]
Length = 379
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 8 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 67
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 68 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 123
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 13 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 71
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 72 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 108
>gi|269868245|gb|ACZ52427.1| Bruno-3 transcript variant 9 [Drosophila melanogaster]
Length = 354
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 8 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 67
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 68 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 123
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 13 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 71
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 72 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 108
>gi|269868227|gb|ACZ52419.1| Bruno-3 transcript variant 5, partial [Drosophila pseudoobscura]
Length = 390
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGELE--RLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E L+ KLF+GML K +E +V +F +G+I++ ILRG TSKGCA
Sbjct: 25 LQLKPAENESRSGHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSGHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
++QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKER 125
>gi|269868279|gb|ACZ52444.1| Bruno-3 transcript variant 9 [Drosophila virilis]
Length = 353
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 8 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 67
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 68 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 123
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 13 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 71
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 72 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 108
>gi|269868281|gb|ACZ52445.1| Bruno-3 transcript variant 9 [Drosophila virilis]
Length = 353
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 8 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 67
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 68 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 123
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 13 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 71
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 72 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 108
>gi|426253953|ref|XP_004020653.1| PREDICTED: CUGBP Elav-like family member 4 [Ovis aries]
Length = 513
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 92/188 (48%), Gaps = 33/188 (17%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +G F S A
Sbjct: 46 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGFAFKTNCSTDSAF 105
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
K A H K LPG + P+QVK AD E S S L
Sbjct: 106 KVGRAVHKMKELPGMNRPIQVKPADSE-----------------SRGGSSCL-------- 140
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+Q CAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER R
Sbjct: 141 --------RQPPSRCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 192
Query: 191 RAQKAQSQ 198
R Q+ Q
Sbjct: 193 RMQQMAGQ 200
>gi|320545833|ref|NP_001189095.1| bruno-3, isoform H [Drosophila melanogaster]
gi|318069196|gb|ADV37531.1| bruno-3, isoform H [Drosophila melanogaster]
Length = 416
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 88
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALF 123
S+QEA A+ H +T+PGASS L VKYAD E ER ++ N+ V F
Sbjct: 89 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLLNPFVFNQF 148
Query: 124 SIYGTIKDL 132
S YG L
Sbjct: 149 SPYGAYAQL 157
>gi|442632161|ref|NP_001261807.1| bruno-3, isoform N [Drosophila melanogaster]
gi|442632163|ref|NP_001261808.1| bruno-3, isoform O [Drosophila melanogaster]
gi|440215743|gb|AGB94500.1| bruno-3, isoform N [Drosophila melanogaster]
gi|440215744|gb|AGB94501.1| bruno-3, isoform O [Drosophila melanogaster]
Length = 403
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 20 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 79
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 80 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 135
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 25 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 83
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 84 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 120
>gi|426331471|ref|XP_004026704.1| PREDICTED: CUGBP Elav-like family member 3-like [Gorilla gorilla
gorilla]
Length = 348
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 73/111 (65%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK AD E + KLF+GML K ++ +V +F +GTI + +LRG TSKGCAF
Sbjct: 4 PIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAF 63
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 64 VKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVATQ 114
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV
Sbjct: 11 DSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQ 67
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 68 THAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 103
>gi|320545827|ref|NP_001189092.1| bruno-3, isoform E [Drosophila melanogaster]
gi|318069193|gb|ADV37528.1| bruno-3, isoform E [Drosophila melanogaster]
Length = 408
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 88
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 89 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 125
>gi|269868243|gb|ACZ52426.1| Bruno-3 transcript variant 9 [Drosophila melanogaster]
Length = 354
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 8 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 67
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 68 FVKFGSQQKAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 123
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 13 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 71
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+Q+A A+ H +T+PGASS L VKYAD E ER
Sbjct: 72 GSQQKAQSAITNLHGSQTMPGASSSLVVKYADTEKER 108
>gi|269868220|gb|ACZ52416.1| Bruno-3 transcript variant 4, partial [Drosophila pseudoobscura]
Length = 396
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +G+I++ +LRG TSKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTVLRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKERQ RR + N L
Sbjct: 85 FVKFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMHQMAGHMNLL 140
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 66/126 (52%), Gaps = 5/126 (3%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E +++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTVLRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSA 121
++QEA A+ H +T+PGASS L VKYAD E ER ++ N+ V
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPGASSSLVVKYADTEKERQIRRMHQMAGHMNLLNPFVFN 146
Query: 122 LFSIYG 127
FS YG
Sbjct: 147 QFSPYG 152
>gi|320545831|ref|NP_001189094.1| bruno-3, isoform G [Drosophila melanogaster]
gi|318069195|gb|ADV37530.1| bruno-3, isoform G [Drosophila melanogaster]
Length = 390
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 88
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALF 123
S+QEA A+ H +T+PGASS L VKYAD E ER ++ N+ V F
Sbjct: 89 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLLNPFVFNQF 148
Query: 124 SIYGTIKDL 132
S YG L
Sbjct: 149 SPYGAYAQL 157
>gi|320545825|ref|NP_001189091.1| bruno-3, isoform D [Drosophila melanogaster]
gi|318069192|gb|ADV37527.1| bruno-3, isoform D [Drosophila melanogaster]
Length = 382
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 85 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 140
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 88
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 89 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 125
>gi|151936113|gb|ABS18833.1| ELAV-type RNA binding protein variant B [Caenorhabditis elegans]
Length = 193
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 80/130 (61%), Gaps = 1/130 (0%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+K+FVGQ+P+ E +F+++ V NI++DK+T+AS+GCCFV R++A +A
Sbjct: 55 IKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQG 114
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
A HN K + G P+Q+K AD E R E KLFIG L K +E + +F+ +G I+D +
Sbjct: 115 ALHNIKVIEGMHHPVQMKPADTE-NRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSV 173
Query: 135 LRGSQQTSKG 144
LR S+G
Sbjct: 174 LRDQDGKSRG 183
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Query: 79 KKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG- 137
K T P ++ V + E + K+F+G +P+ +E + LF YG++ ILR
Sbjct: 31 KDTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDK 90
Query: 138 SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
S Q SKGC F+ + ++ A+ A A++ +EG P+ +K ADTE + +
Sbjct: 91 STQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNERK 143
>gi|312076960|ref|XP_003141093.1| LYST-interacting protein LIP9 [Loa loa]
Length = 473
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 77/118 (65%), Gaps = 10/118 (8%)
Query: 89 LQVKYADGE--------LERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ 140
+QVK AD E +E E KLF+GML K +E +V ALF+ +G I ++ +LRG+
Sbjct: 5 MQVKPADNESRPDSPKNVE--ERKLFVGMLSKQHNEDDVRALFAPFGVIDEVTVLRGADG 62
Query: 141 TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
SKGCAF+K+ T QA A+ A++G M G+S LVVK+ADTEKERQ RR Q+ +Q
Sbjct: 63 LSKGCAFVKFATHSQAAMAINALHGSQTMPGASSSLVVKFADTEKERQLRRMQQMAAQ 120
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 3 ESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVI 62
ES+ + + E KLFVG + K E + A+F F ++DEV +++ S+GC FV
Sbjct: 13 ESRPDSPKNVEERKLFVGMLSKQHNEDDVRALFAPFGVIDEVTVLRG-ADGLSKGCAFVK 71
Query: 63 CPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+ +A A+NA H +T+PGASS L VK+AD E ER
Sbjct: 72 FATHSQAAMAINALHGSQTMPGASSSLVVKFADTEKER 109
>gi|449491676|ref|XP_002192940.2| PREDICTED: LOW QUALITY PROTEIN: bruno-like 5, RNA binding protein
[Taeniopygia guttata]
Length = 370
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 71/111 (63%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK AD E + KLF+GML K SE +V LF +G I + +LRG SKGCAF
Sbjct: 4 PIQVKPADSESRGGDRKLFVGMLNKQQSEDDVLRLFEPFGVIDECTVLRGPDGNSKGCAF 63
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 64 VKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQ 114
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E +L +F+ F ++DE +++ S+GC FV S EA A++A
Sbjct: 20 KLFVGMLNKQQSEDDVLRLFEPFGVIDECTVLRGPDGN-SKGCAFVKFSSHTEAQAAIHA 78
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD + ER ++
Sbjct: 79 LHGSQTMPGASSSLVVKFADTDKERTLRRM 108
>gi|390338613|ref|XP_003724811.1| PREDICTED: CUGBP Elav-like family member 3-A-like isoform 1
[Strongylocentrotus purpuratus]
Length = 469
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 94/184 (51%), Gaps = 48/184 (26%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ +KLFVGQ+P+++ E L +F++F + E+ +++D+ T +GC F+ R+ A
Sbjct: 44 DHDAIKLFVGQIPRNLEEKDLRPIFEDFGRIYELTVLRDRFTGVHKGCAFLTYCDRESAI 103
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
+A A H +KTLPG + LQVK AD E
Sbjct: 104 RAQKALHEQKTLPGMTRALQVKPADSE--------------------------------- 130
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
RG GCAF+K+ T+++A+ A+ +IN ++ LVVK+ADTEKERQ R
Sbjct: 131 ----SRG------GCAFVKFSTRKEAVGAINSIN-----MSANPNLVVKFADTEKERQLR 175
Query: 191 RAQK 194
R Q+
Sbjct: 176 RMQQ 179
>gi|119573804|gb|EAW53419.1| trinucleotide repeat containing 4, isoform CRA_a [Homo sapiens]
Length = 388
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 74/111 (66%), Gaps = 1/111 (0%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK AD E R + KLF+GML K ++ +V +F +GTI + +LRG TSKGCAF
Sbjct: 4 PIQVKPADSE-SRGDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAF 62
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
+K++T +A AA+ ++ + G+S LVVK+ADTEKER RR Q+ +Q
Sbjct: 63 VKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVATQ 113
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 5/100 (5%)
Query: 3 ESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCF 60
+ K S KLFVG + K T+ + MF+ F +DE +++ D T S+GC F
Sbjct: 6 QVKPADSESRGDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAF 62
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V + EA A+N H+ +TLPGASS L VK+AD E ER
Sbjct: 63 VKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKER 102
>gi|158293699|ref|XP_315047.4| AGAP004950-PA [Anopheles gambiae str. PEST]
gi|157016572|gb|EAA10371.5| AGAP004950-PA [Anopheles gambiae str. PEST]
Length = 354
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 70/102 (68%)
Query: 101 LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAAL 160
L+ KLF+GML K +E +V LF+ +GTI++ ILRG SKGCAF+K+ + ++A AA+
Sbjct: 1 LDRKLFVGMLSKQQTEEDVRQLFNAFGTIEECTILRGPDGASKGCAFVKFTSHQEAQAAI 60
Query: 161 EAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
+++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 61 TSLHGSQTMPGASSSLVVKFADTEKERQLRRMQQMAGHMNLL 102
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K TE + +F F ++E I++ AS+GC FV S QEA A+ +
Sbjct: 4 KLFVGMLSKQQTEEDVRQLFNAFGTIEECTILRGPDG-ASKGCAFVKFTSHQEAQAAITS 62
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD E ER ++
Sbjct: 63 LHGSQTMPGASSSLVVKFADTEKERQLRRM 92
>gi|195427147|ref|XP_002061640.1| GK17101 [Drosophila willistoni]
gi|194157725|gb|EDW72626.1| GK17101 [Drosophila willistoni]
Length = 645
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 82/132 (62%), Gaps = 5/132 (3%)
Query: 76 CHNKKTLPGA---SSPLQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
CH+ P + LQ+K A+ E E L+ KLF+GML K +E +V +F +GTI+
Sbjct: 57 CHHPLIPPAIKLMNRTLQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFQPFGTIE 116
Query: 131 DLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 190
+ ILRG SKGCAF+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ R
Sbjct: 117 ECTILRGPDGASKGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIR 176
Query: 191 RAQKAQSQANNL 202
R Q+ N L
Sbjct: 177 RMQQMAGHMNLL 188
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F+ F ++E I++ AS+GC FV
Sbjct: 78 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFQPFGTIEECTILRGPDG-ASKGCAFVKF 136
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 137 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 173
>gi|388506964|gb|AFK41548.1| unknown [Medicago truncatula]
Length = 498
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 103/190 (54%), Gaps = 22/190 (11%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VK++V VP+ +EA + +F+ + + EV +++DK T +G C V + AD +
Sbjct: 74 VKVYVAPVPRTASEADVRLVFQGYGTIVEVVLLRDKATGVRQGSCLVKYSTFDVADMTIK 133
Query: 75 ACHNKKTLPGASSPLQVKYADGELER---------LEH--------KLFIGMLPKNVSEA 117
A N+ T PG SSP+ V++ D + ER +E K+++G + S+
Sbjct: 134 ALSNQYTFPGESSPVVVRFTDRKRERFGLRDFCQNMERRDPPEVVGKVYVGCINNEASKQ 193
Query: 118 EVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLV 177
E+ +FS YG I+D+ +LR ++ F+K+ +E ALAA++ ++ M G PL+
Sbjct: 194 EIEEIFSPYGHIEDVVVLR-----NRRYGFVKFYNREMALAAIKGLDRTFTMRGCDQPLI 248
Query: 178 VKWADTEKER 187
V++A+ +K R
Sbjct: 249 VRFAEPKKPR 258
>gi|452823093|gb|EME30106.1| RNA-binding protein [Galdieria sulphuraria]
Length = 477
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 99/199 (49%), Gaps = 6/199 (3%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M +S + + K+F+GQ+P ++ E L + + + V E I++++ T SRGC F
Sbjct: 26 MTQSPSTRLFKDSPCKIFIGQLPSNVVEEDLRRICEPYGTVLETTIVRNRMTNQSRGCGF 85
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVS 120
+ +R+EAD A+ A H K P S PLQV+ A+ + E KL+IG L V E ++
Sbjct: 86 CVFHNREEADNAIQALHGTKPFPSGSKPLQVRLAEKNSDFSETKLYIGHLEPIVEEQQLR 145
Query: 121 ALFSIYGTIKDLQILR-----GSQQTSKGCAFLKYETKEQAL-AALEAINGKHKMEGSSV 174
F+ +G I D+ I+R + F+++ E A A L A NG+ +E
Sbjct: 146 NAFTKFGEIVDVNIVRPRNVDNQHNSPYNYGFVEFSGNEAADNAILSAKNGQVWLENGKP 205
Query: 175 PLVVKWADTEKERQARRAQ 193
V++A + R R +
Sbjct: 206 LTEVRYARLSRNRYGRNSD 224
>gi|384247531|gb|EIE21017.1| RNA-binding domain-containing protein, partial [Coccomyxa
subellipsoidea C-169]
Length = 344
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 102/191 (53%), Gaps = 14/191 (7%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
E +SE R LFVGQVP + E L +F F V ++++K + RGC V+
Sbjct: 7 EPVASEPR--LFVGQVPSDVREEDLWPLFTPFGTVRNLHMLKGSDGK-PRGCAMVLFQRW 63
Query: 67 QEADKAVNACHNKKTLP--GASSPLQVKYAD---------GELERLEHKLFIGMLPKNVS 115
+A+ A A + L G PL V +A+ E KLF+G +P++V+
Sbjct: 64 AQAEAAAEALDGQLVLETGGQRKPLVVHFANPRRAPPGQPAEPGIAPRKLFVGQVPRDVT 123
Query: 116 EAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVP 175
E + LF YG I+ + ILR + S GCAF++++ QA A+EA NGK ++ S VP
Sbjct: 124 EDTLRPLFEPYGDIEHINILRTHRGQSAGCAFVQFQKWAQAEVAMEAHNGKTRLGNSEVP 183
Query: 176 LVVKWADTEKE 186
LVVK+AD +++
Sbjct: 184 LVVKFADAKRK 194
>gi|348549848|ref|XP_003460745.1| PREDICTED: CUGBP Elav-like family member 5-like [Cavia porcellus]
Length = 424
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 85/146 (58%), Gaps = 12/146 (8%)
Query: 83 PGASSPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQT 141
P + P+QVK AD E + KLF+GML K SE +V LF +G I + +LRG +
Sbjct: 52 PQMARPIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGS 111
Query: 142 SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANN 201
SKGCAF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 112 SKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGI 171
Query: 202 LPNADSQHPSLFGALPMGYAPPYNGY 227
L PSL ALP PY+ Y
Sbjct: 172 L------TPSL--ALPFS---PYSAY 186
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+ E + +R KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV
Sbjct: 63 ADSESRGGRDR-KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKF 120
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
S EA A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 121 SSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 162
>gi|294877844|ref|XP_002768155.1| ribonucleoprotein, putative [Perkinsus marinus ATCC 50983]
gi|239870352|gb|EER00873.1| ribonucleoprotein, putative [Perkinsus marinus ATCC 50983]
Length = 391
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 98/189 (51%), Gaps = 10/189 (5%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTT-RASRGCCFVICPSRQEADKAV 73
V+LFVG++P E + +F+ + V EV +I+ K + GC FV + EA A+
Sbjct: 9 VRLFVGKLPAAWNEQNIRDLFEAYGEVQEVGLIRPKENGKQQTGCAFVKFGAVHEAATAI 68
Query: 74 NACHNKKTLPGASSPLQVKYADGELERL---------EHKLFIGMLPKNVSEAEVSALFS 124
+ + A +QV++A+GE ERL KLF+G +P + S+ E+ +F
Sbjct: 69 KSLNGTYKADDAPGFVQVQFANGEPERLGLPEDTEGYSQKLFVGNVPPSTSDDELKQIFD 128
Query: 125 IYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
YG + + L + + AF+++ K AL A++A+N K+ G P+ VK ADT
Sbjct: 129 EYGNVTEAYSLESKRASGNKAAFVRFSKKSDALKAIDALNDKYTFPGEPHPITVKCADTR 188
Query: 185 KERQARRAQ 193
++R A + +
Sbjct: 189 EQRLAHKQE 197
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 56/92 (60%), Gaps = 6/92 (6%)
Query: 100 RLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR----GSQQTSKGCAFLKYETKEQ 155
R+ +LF+G LP +E + LF YG ++++ ++R G QQT GCAF+K+ +
Sbjct: 6 RIPVRLFVGKLPAAWNEQNIRDLFEAYGEVQEVGLIRPKENGKQQT--GCAFVKFGAVHE 63
Query: 156 ALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
A A++++NG +K + + + V++A+ E ER
Sbjct: 64 AATAIKSLNGTYKADDAPGFVQVQFANGEPER 95
>gi|26350575|dbj|BAC38924.1| unnamed protein product [Mus musculus]
Length = 148
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 84/147 (57%), Gaps = 12/147 (8%)
Query: 88 PLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
P+QVK AD E + KLF+GML K SE +V LF +G I + +LRG +SKGCA
Sbjct: 4 PIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCA 63
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNAD 206
F+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR Q+ Q L
Sbjct: 64 FVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGILT--- 120
Query: 207 SQHPSLFGALPMGYAPPYNGYGYQASG 233
PSL LP PY+ Y SG
Sbjct: 121 ---PSL--TLPFS---PYSAYAQAVSG 139
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
E + +R KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV S
Sbjct: 13 ESRGGRDR-KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKFSSH 70
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
EA A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 71 TEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 109
>gi|269868239|gb|ACZ52424.1| Bruno-3 transcript variant 7 [Drosophila melanogaster]
Length = 362
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 76/116 (65%), Gaps = 2/116 (1%)
Query: 89 LQVKYADG--ELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCA
Sbjct: 8 LQLKPAENVSRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCA 67
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 68 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 123
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
+S KLFVG + K TE + +F F ++E I++ AS+GC FV S+QE
Sbjct: 18 RSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKFGSQQE 76
Query: 69 ADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGT 128
A A+ H +T+PGASS L VKYAD E ER ++ N+ V FS YG
Sbjct: 77 AQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLLNPFVFNQFSPYGA 136
Query: 129 IKDL 132
L
Sbjct: 137 YAQL 140
>gi|269868241|gb|ACZ52425.1| Bruno-3 transcript variant 8 [Drosophila melanogaster]
Length = 356
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 70/104 (67%)
Query: 99 ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALA 158
E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCAF+K+ ++++A +
Sbjct: 14 EHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCAFVKFGSQQEAQS 73
Query: 159 ALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 74 AITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 117
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 7 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 65
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALF 123
S+QEA A+ H +T+PGASS L VKYAD E ER ++ N+ V F
Sbjct: 66 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLLNPFVFNQF 125
Query: 124 SIYGTIKDL 132
S YG L
Sbjct: 126 SPYGAYAQL 134
>gi|449470886|ref|XP_002191720.2| PREDICTED: CUGBP Elav-like family member 4-like [Taeniopygia
guttata]
Length = 365
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 71/111 (63%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK AD E + KLF+GML K SE +V LF +G I++ ILRG SKGCAF
Sbjct: 4 PIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFEPFGQIEECTILRGPDGASKGCAF 63
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
+KY + +A AA+ +++G M G+S LVVK+ADT+KER RR + Q
Sbjct: 64 VKYGSHAEAQAAINSLHGSQTMPGASSSLVVKFADTDKERTLRRMHQMAGQ 114
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E KLFVG + K +E + +F+ F ++E I++ AS+GC FV S EA A
Sbjct: 17 EDRKLFVGMLGKQQSEDDVRRLFEPFGQIEECTILRGPDG-ASKGCAFVKYGSHAEAQAA 75
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+N+ H +T+PGASS L VK+AD + ER ++
Sbjct: 76 INSLHGSQTMPGASSSLVVKFADTDKERTLRRM 108
>gi|320545835|ref|NP_001189096.1| bruno-3, isoform I [Drosophila melanogaster]
gi|318069197|gb|ADV37532.1| bruno-3, isoform I [Drosophila melanogaster]
Length = 384
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 70/104 (67%)
Query: 99 ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALA 158
E L+ KLF+GML K +E +V +F +GTI++ ILRG SKGCAF+K+ ++++A +
Sbjct: 31 EHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDGASKGCAFVKFGSQQEAQS 90
Query: 159 ALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 91 AITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 134
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E +S KLFVG + K TE + +F F ++E I++ AS+GC FV
Sbjct: 24 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKF 82
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALF 123
S+QEA A+ H +T+PGASS L VKYAD E ER ++ N+ V F
Sbjct: 83 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLLNPFVFNQF 142
Query: 124 SIYGTIKDL 132
S YG L
Sbjct: 143 SPYGAYAQL 151
>gi|226503733|ref|NP_001142011.1| uncharacterized protein LOC100274164 [Zea mays]
gi|194706784|gb|ACF87476.1| unknown [Zea mays]
Length = 212
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 80/116 (68%), Gaps = 5/116 (4%)
Query: 204 NADS-QHPSLFGALPMGYAPPYNGYGYQASGSYGLMQY-RLPPMQNQPGFHGIIPPVNQG 261
NA++ Q S+FG L MGY P YNG+GYQ G+YGLMQY L P+QNQ F ++ PVNQG
Sbjct: 3 NANAMQQNSVFGGLQMGYVPQYNGFGYQPQGTYGLMQYPPLSPVQNQAAFQNMVQPVNQG 62
Query: 262 NAMRGASPDLSSNMGPRNYAMPPSGFVGSGYPAVPGLQYPMPYPGGMLGHRPLNNS 317
+++ GA+ ++S N PR++ S +GS Y +PGLQYP YPGG + HRP ++S
Sbjct: 63 SSIHGANSEVSPNPVPRSFN---SAQLGSPYSPLPGLQYPGVYPGGPINHRPFSSS 115
>gi|383860257|ref|XP_003705607.1| PREDICTED: CUGBP Elav-like family member 2-like [Megachile
rotundata]
Length = 443
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 70/101 (69%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
E KLF+GML K +E +V +FS+YGTI++ +LR S SK CAF+ + +K+ A+ A++
Sbjct: 10 ERKLFVGMLSKKFTENDVRNMFSVYGTIEECSVLRDSTGKSKACAFVTFASKQYAINAIK 69
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
A++ MEG S PLVVK+ADT+KE+ +R Q+ Q+ N+
Sbjct: 70 ALHHSQTMEGCSSPLVVKFADTQKEKDQKRMQQLQTNLWNI 110
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 58/93 (62%), Gaps = 2/93 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
ER KLFVG + K TE + MF + ++E ++++D T + S+ C FV S+Q A A
Sbjct: 10 ER-KLFVGMLSKKFTENDVRNMFSVYGTIEECSVLRDSTGK-SKACAFVTFASKQYAINA 67
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+ A H+ +T+ G SSPL VK+AD + E+ + ++
Sbjct: 68 IKALHHSQTMEGCSSPLVVKFADTQKEKDQKRM 100
>gi|383851701|ref|XP_003701370.1| PREDICTED: CUGBP Elav-like family member 4-like [Megachile
rotundata]
Length = 402
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 68/93 (73%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K +E +V LF+ +GTI++ ILRG +S+GCAF+K + ++ALAA+
Sbjct: 36 DRKLFVGMLSKQQTEDDVRQLFTAFGTIEECTILRGPDGSSRGCAFVKLSSHQEALAAIN 95
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
+++G M G+S +VVK+ADTEKERQ RR Q+
Sbjct: 96 SLHGSQTMPGASSSVVVKFADTEKERQVRRMQQ 128
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K TE + +F F ++E I++ +SRGC FV S QEA A+N+
Sbjct: 38 KLFVGMLSKQQTEDDVRQLFTAFGTIEECTILRGPDG-SSRGCAFVKLSSHQEALAAINS 96
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS + VK+AD E ER ++
Sbjct: 97 LHGSQTMPGASSSVVVKFADTEKERQVRRM 126
>gi|294941928|ref|XP_002783310.1| DAZ-associated protein, putative [Perkinsus marinus ATCC 50983]
gi|239895725|gb|EER15106.1| DAZ-associated protein, putative [Perkinsus marinus ATCC 50983]
Length = 429
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 108/229 (47%), Gaps = 39/229 (17%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
MA + E S VKLFV +P H E+ L A+F+E+ +V++V I++D++T SRG F
Sbjct: 4 MAADRMESTS----VKLFVRGLPVHYPESDLRAVFEEYGMVEDVFILRDRSTMQSRGMAF 59
Query: 61 V---ICPSRQEADKAVNA---CHNKKT--------------LPGASSPLQVKYADGELER 100
V PS A KA+N CHN T + PL V A GE ER
Sbjct: 60 VRFRDIPSGMAAIKALNGYRLCHNTSTSCIDNDVESVNDMSFAQSHIPLSVSLAQGEAER 119
Query: 101 L-----------EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLK 149
L + KLF+ L E E+ +F +G I ++ + AF++
Sbjct: 120 LGMHGEVVATGGDTKLFVSGLGPGTQEEELRTIFEPFGRINEVHV----PGPHALYAFVR 175
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
+ KE AL A+ +NG+ +EGS PL VK A++ + R A Q Q
Sbjct: 176 FAEKEDALKAIREVNGRVTVEGSQRPLEVKVAESRAAKADRNAHHQQQQ 224
>gi|260788580|ref|XP_002589327.1| hypothetical protein BRAFLDRAFT_114402 [Branchiostoma floridae]
gi|229274504|gb|EEN45338.1| hypothetical protein BRAFLDRAFT_114402 [Branchiostoma floridae]
Length = 336
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 82/127 (64%), Gaps = 7/127 (5%)
Query: 86 SSPLQVK-------YADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGS 138
S P+Q+K A+GE E KLF+GM+ K +E++V +F+ YGTI++ +LR
Sbjct: 2 SHPIQMKPANNENRNANGECPVEERKLFVGMVSKKCNESDVRIMFAPYGTIEECTVLRDQ 61
Query: 139 QQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
S+GCAF+ + T+ AL A++A++ MEG S PLVVK+ADT+K+++ +R Q+ +Q
Sbjct: 62 NGQSRGCAFVTFSTRASALNAIKALHQSQTMEGCSSPLVVKFADTQKDKEQKRLQQLNAQ 121
Query: 199 ANNLPNA 205
A + NA
Sbjct: 122 AWSQMNA 128
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
EER KLFVG V K E+ + MF + ++E +++D+ + SRGC FV +R A
Sbjct: 24 EER-KLFVGMVSKKCNESDVRIMFAPYGTIEECTVLRDQNGQ-SRGCAFVTFSTRASALN 81
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A+ A H +T+ G SSPL VK+AD + ++ + +L
Sbjct: 82 AIKALHQSQTMEGCSSPLVVKFADTQKDKEQKRL 115
>gi|195590112|ref|XP_002084791.1| GD12651 [Drosophila simulans]
gi|194196800|gb|EDX10376.1| GD12651 [Drosophila simulans]
Length = 616
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 76/122 (62%), Gaps = 3/122 (2%)
Query: 84 GASSPLQVK---YADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ 140
G S PL+ A + L+ KLF+GML K +E +V +F +GTI++ ILRG
Sbjct: 227 GESEPLETLGSIIAKDPFKHLDRKLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG 286
Query: 141 TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQAN 200
SKGCAF+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N
Sbjct: 287 ASKGCAFVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMN 346
Query: 201 NL 202
L
Sbjct: 347 LL 348
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K TE + +F F ++E I++ AS+GC FV S+QEA A+
Sbjct: 250 KLFVGMLSKQQTEDDVRQIFHPFGTIEECTILRGPDG-ASKGCAFVKFGSQQEAQSAITN 308
Query: 76 CHNKKTLPGASSPLQVKYADGELER 100
H +T+PGASS L VKYAD E ER
Sbjct: 309 LHGSQTMPGASSSLVVKYADTEKER 333
>gi|431896232|gb|ELK05648.1| CUG-BP- and ETR-3-like factor 4 [Pteropus alecto]
Length = 379
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 72/121 (59%), Gaps = 10/121 (8%)
Query: 88 PLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG 137
P+QVK AD E + KLF+GML K SE +V LF +G I++ ILRG
Sbjct: 4 PIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRG 63
Query: 138 SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQS 197
SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER RR Q+
Sbjct: 64 PDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAG 123
Query: 198 Q 198
Q
Sbjct: 124 Q 124
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 57/95 (60%), Gaps = 2/95 (2%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
S++R KLFVG + K +E + +F+ F ++E I++ S+GC FV S EA
Sbjct: 26 SQDR-KLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGN-SKGCAFVKYSSHAEAQ 83
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A+NA H +T+PGASS L VK+AD + ER ++
Sbjct: 84 AAINALHGSQTMPGASSSLVVKFADTDKERTMRRM 118
>gi|281350688|gb|EFB26272.1| hypothetical protein PANDA_008623 [Ailuropoda melanoleuca]
Length = 245
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 72/121 (59%), Gaps = 10/121 (8%)
Query: 88 PLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG 137
P+QVK AD E + KLF+GML K SE +V LF +G I++ ILRG
Sbjct: 4 PIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRG 63
Query: 138 SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQS 197
SKGCAF+KY + +A AA+ +++G M G+S LVVK+ADT+KER RR Q+
Sbjct: 64 PDGNSKGCAFVKYSSHAEAQAAINSLHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAG 123
Query: 198 Q 198
Q
Sbjct: 124 Q 124
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 57/95 (60%), Gaps = 2/95 (2%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
S++R KLFVG + K +E + +F+ F ++E I++ S+GC FV S EA
Sbjct: 26 SQDR-KLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGN-SKGCAFVKYSSHAEAQ 83
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A+N+ H +T+PGASS L VK+AD + ER ++
Sbjct: 84 AAINSLHGSQTMPGASSSLVVKFADTDKERTMRRM 118
>gi|294936191|ref|XP_002781649.1| Nuclear polyadenylated RNA-binding protein, putative [Perkinsus
marinus ATCC 50983]
gi|239892571|gb|EER13444.1| Nuclear polyadenylated RNA-binding protein, putative [Perkinsus
marinus ATCC 50983]
Length = 451
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 97/189 (51%), Gaps = 10/189 (5%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTT-RASRGCCFVICPSRQEADKAV 73
V+LFVG++P E + +F+ + V EV +I+ K + GC FV + EA A+
Sbjct: 9 VRLFVGRLPATWQEQNIRDLFEAYGEVQEVGMIRPKDNGKQQTGCAFVKFGAVHEAATAI 68
Query: 74 NACHNKKTLPGASSPLQVKYADGELERL---------EHKLFIGMLPKNVSEAEVSALFS 124
+ + +QV++A+GE ERL KLF+G +P + ++ E+ +F
Sbjct: 69 KSLNGTYKADDVCGFIQVQFANGEPERLGLPEDTEGYSQKLFVGNIPPSTTDEELKRIFD 128
Query: 125 IYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
YG + + L + + AF++Y K A+ A+EA+N K+ G P+ VK ADT
Sbjct: 129 EYGNVTEAYGLESKRASGNKAAFVRYSKKSDAVKAIEALNEKYTFPGEPHPITVKCADTR 188
Query: 185 KERQARRAQ 193
++R A + +
Sbjct: 189 EQRLAHKQE 197
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 54/92 (58%), Gaps = 6/92 (6%)
Query: 100 RLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR----GSQQTSKGCAFLKYETKEQ 155
R+ +LF+G LP E + LF YG ++++ ++R G QQT GCAF+K+ +
Sbjct: 6 RIPVRLFVGRLPATWQEQNIRDLFEAYGEVQEVGMIRPKDNGKQQT--GCAFVKFGAVHE 63
Query: 156 ALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
A A++++NG +K + + V++A+ E ER
Sbjct: 64 AATAIKSLNGTYKADDVCGFIQVQFANGEPER 95
>gi|269868233|gb|ACZ52421.1| Bruno-3 transcript variant 4 [Drosophila melanogaster]
Length = 380
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 76/116 (65%), Gaps = 2/116 (1%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V + +GTI++ ILRG SKGCA
Sbjct: 8 LQLKPAENESHSEHLDRKLFVGMLSKQQTEDDVRQISHPFGTIEECTILRGPDGASKGCA 67
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ ++++A +A+ ++G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 68 FVKFGSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKERQIRRMQQMAGHMNLL 123
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
++ E S KLFVG + K TE + + F ++E I++ AS+GC FV
Sbjct: 13 AENESHSEHLDRKLFVGMLSKQQTEDDVRQISHPFGTIEECTILRGPDG-ASKGCAFVKF 71
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
S+QEA A+ H +T+PGASS L VKYAD E ER
Sbjct: 72 GSQQEAQSAITNLHGSQTMPGASSSLVVKYADTEKER 108
>gi|118402075|ref|XP_001033357.1| hypothetical protein TTHERM_00421020 [Tetrahymena thermophila]
gi|89287705|gb|EAR85694.1| hypothetical protein TTHERM_00421020 [Tetrahymena thermophila
SB210]
Length = 756
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 96/169 (56%), Gaps = 14/169 (8%)
Query: 24 KHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLP 83
K+M E L F+++ + +V +I+DK + +GC FV+ S A+ A+ A K LP
Sbjct: 75 KNMEENDLKTFFEKYGEIVKVQVIRDKNNQ-HKGCAFVVFASILCANIAIEALKATK-LP 132
Query: 84 GASSPLQVKYADGELERL------EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG 137
G VK+AD E +RL ++ L++ +PKN SE E+ +F YG +K++ I +
Sbjct: 133 G------VKWADNEPDRLGIRQDQDYVLYVAHIPKNASEPEIRNVFENYGIVKEVDIPKD 186
Query: 138 SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 186
TS+G F+K+E EQA+ A +A++ K + + LVVK+ D +K+
Sbjct: 187 QSGTSRGFVFVKFENIEQAILAKQALHEKQVLNNQTQSLVVKFYDPKKK 235
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 76
L+V +PK+ +E ++ +F+ + +V EV+I KD++ SRG FV + ++A A A
Sbjct: 154 LYVAHIPKNASEPEIRNVFENYGIVKEVDIPKDQSG-TSRGFVFVKFENIEQAILAKQAL 212
Query: 77 HNKKTLPGASSPLQVKYAD 95
H K+ L + L VK+ D
Sbjct: 213 HEKQVLNNQTQSLVVKFYD 231
>gi|157138640|ref|XP_001664292.1| hypothetical protein AaeL_AAEL014033 [Aedes aegypti]
gi|108869466|gb|EAT33691.1| AAEL014033-PA, partial [Aedes aegypti]
Length = 351
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 67/99 (67%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAI 163
KLF+GML K +E +V LF+ +GTI++ ILRG SKGCAF+K+ + ++A AA+ +
Sbjct: 2 KLFVGMLSKQQTEEDVRQLFNAFGTIEECTILRGPDGASKGCAFVKFTSHQEAQAAITTL 61
Query: 164 NGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
+G M G+S LVVK+ADTEKERQ RR Q+ N L
Sbjct: 62 HGSQTMPGASSSLVVKFADTEKERQLRRMQQMAGHMNLL 100
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K TE + +F F ++E I++ AS+GC FV S QEA A+
Sbjct: 2 KLFVGMLSKQQTEEDVRQLFNAFGTIEECTILRGPDG-ASKGCAFVKFTSHQEAQAAITT 60
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD E ER ++
Sbjct: 61 LHGSQTMPGASSSLVVKFADTEKERQLRRM 90
>gi|118379755|ref|XP_001023043.1| hypothetical protein TTHERM_00348880 [Tetrahymena thermophila]
gi|89304810|gb|EAS02798.1| hypothetical protein TTHERM_00348880 [Tetrahymena thermophila
SB210]
Length = 474
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 104/194 (53%), Gaps = 9/194 (4%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLF+GQVPK E+ L F++ + ++ +I+D+ R +GC F S EA+K +
Sbjct: 95 IKLFIGQVPKDWQESDLKIFFEKHTSITQIEVIRDQKFR-HQGCAFATFSSMSEAEKVIE 153
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL------EHKLFIGMLPKNVSEAEVSALFSIYGT 128
NK P + + +K+A GE ERL HKL I LP +S+A +S +F +G
Sbjct: 154 FYKNKH-FPNSKQEIIMKWASGEEERLGVSENSSHKLIIKNLPALISDASISNIFDNFGR 212
Query: 129 IKDLQILRGSQQTS-KGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
I+ L+++R + + KG AF+KY KE A A++ +N ++ + L V + + ++
Sbjct: 213 IQQLKVIRDKKTSECKGHAFIKYYEKESAHLAVQNLNKQNIYLIQNKKLKVSFIEKSYQK 272
Query: 188 QARRAQKAQSQANN 201
+ ++ K Q N
Sbjct: 273 KQKQILKYMKQNTN 286
Score = 41.2 bits (95), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 105 LFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAIN 164
+F+ LPK +E + LFS YG I + I R S+G F+ + +A A++ +N
Sbjct: 384 IFVFHLPKQYNEKNLFELFSGYGNIISITICRKQNGESRGYGFVSFNQPYEAAHAIKELN 443
Query: 165 GKHKMEGSSVPLVVKWADTEK 185
G + M G + + +K EK
Sbjct: 444 GLNLM-GKRIKVELKQTHIEK 463
>gi|390478372|ref|XP_002761622.2| PREDICTED: CUGBP Elav-like family member 5 [Callithrix jacchus]
Length = 383
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 82/141 (58%), Gaps = 12/141 (8%)
Query: 88 PLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
P+QVK AD E + KLF+GML K SE +V LF +G I + +LRG +SKGCA
Sbjct: 15 PIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCA 74
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNAD 206
F+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR Q+ Q L
Sbjct: 75 FVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIL---- 130
Query: 207 SQHPSLFGALPMGYAPPYNGY 227
PSL LP PY+ Y
Sbjct: 131 --TPSL--TLPFS---PYSAY 144
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+ E + +R KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV
Sbjct: 21 ADSESRGGRDR-KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKF 78
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
S EA A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 79 SSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 120
>gi|426386616|ref|XP_004059779.1| PREDICTED: CUGBP Elav-like family member 5 isoform 1 [Gorilla
gorilla gorilla]
gi|194376596|dbj|BAG57444.1| unnamed protein product [Homo sapiens]
Length = 320
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 82/141 (58%), Gaps = 12/141 (8%)
Query: 88 PLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
P+QVK AD E + KLF+GML K SE +V LF +G I + +LRG +SKGCA
Sbjct: 4 PIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCA 63
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNAD 206
F+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR Q+ Q L
Sbjct: 64 FVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIL---- 119
Query: 207 SQHPSLFGALPMGYAPPYNGY 227
PSL LP PY+ Y
Sbjct: 120 --TPSL--TLPFS---PYSAY 133
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+ E + +R KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV
Sbjct: 10 ADSESRGGRDR-KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKF 67
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
S EA A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 68 SSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 109
>gi|332255740|ref|XP_003276989.1| PREDICTED: CUGBP Elav-like family member 5 [Nomascus leucogenys]
Length = 438
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 74/126 (58%), Gaps = 4/126 (3%)
Query: 48 KDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGAS----SPLQVKYADGELERLEH 103
+D + +GC F+ +R A KA A H +KTLPG S P+QVK AD E +
Sbjct: 39 EDSSRSGGKGCAFLTYCARDSAIKAQTALHEQKTLPGVSPVWARPIQVKPADSESRGGDR 98
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAI 163
KLF+GML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+ A+
Sbjct: 99 KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHAL 158
Query: 164 NGKHKM 169
+G M
Sbjct: 159 HGSQTM 164
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV S EA A++A
Sbjct: 99 KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKFSSHTEAQAAIHA 157
Query: 76 CHNKKTLP 83
H +T+P
Sbjct: 158 LHGSQTMP 165
>gi|149034410|gb|EDL89147.1| similar to bruno-like 5, RNA binding protein (predicted) [Rattus
norvegicus]
Length = 319
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 73/116 (62%), Gaps = 1/116 (0%)
Query: 88 PLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
P+QVK AD E + KLF+GML K SE +V LF +G I + +LRG +SKGCA
Sbjct: 4 PIQVKPADSENRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCA 63
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
F+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR Q+ Q L
Sbjct: 64 FVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIL 119
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+ E + +R KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV
Sbjct: 10 ADSENRGGRDR-KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKF 67
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
S EA A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 68 SSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 109
>gi|145306686|gb|ABP57107.1| CUG-BP and ETR-3-like factor 5 [Gallus gallus]
Length = 371
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 72/113 (63%), Gaps = 1/113 (0%)
Query: 87 SPLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGC 145
+P+QVK AD E + KLF+GML K SE +V LF +G I + +LRG SKGC
Sbjct: 2 APIQVKPADSESRGGRDRKLFVGMLNKQQSEDDVLRLFEPFGVIDECTVLRGPDGNSKGC 61
Query: 146 AFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
AF+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 62 AFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQ 114
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+ E + +R KLFVG + K +E +L +F+ F ++DE +++ S+GC FV
Sbjct: 9 ADSESRGGRDR-KLFVGMLNKQQSEDDVLRLFEPFGVIDECTVLRGPDGN-SKGCAFVKF 66
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
S EA A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 67 SSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 108
>gi|297275215|ref|XP_001106276.2| PREDICTED: CUGBP Elav-like family member 4-like [Macaca mulatta]
Length = 438
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 67/101 (66%)
Query: 98 LERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQAL 157
L++ + KLF+GML K SE +V LF +G I++ ILRG SKGCAF+KY + +A
Sbjct: 120 LQKEDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQ 179
Query: 158 AALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
AA+ A++G M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 180 AAINALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQ 220
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+E KLFVG + K +E + +F+ F ++E I++ S+GC FV S EA
Sbjct: 122 KEDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGN-SKGCAFVKYSSHAEAQA 180
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A+NA H +T+PGASS L VK+AD + ER ++
Sbjct: 181 AINALHGSQTMPGASSSLVVKFADTDKERTMRRM 214
>gi|50725240|dbj|BAD34210.1| Flowering time control protein FCA gamma-like [Oryza sativa
Japonica Group]
Length = 546
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 71/103 (68%), Gaps = 3/103 (2%)
Query: 88 PLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKG 144
P+QV+YADGE ER +EHKLF+ L K + E+ +F+ YG ++D+ I++ + S+G
Sbjct: 3 PIQVRYADGERERHGAIEHKLFVASLNKQATAKEIEEIFAPYGHVEDVYIMKDGMRQSRG 62
Query: 145 CAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
C F+K+ ++E ALAA+ A++G + M G PL++++AD ++ R
Sbjct: 63 CGFVKFSSREPALAAMSALSGNYVMRGCEQPLIIRFADPKRPR 105
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 2 AESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFV 61
A+ ++E+ + E KLFV + K T ++ +F + V++V I+KD R SRGC FV
Sbjct: 9 ADGERERHGAIEH-KLFVASLNKQATAKEIEEIFAPYGHVEDVYIMKDGM-RQSRGCGFV 66
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
SR+ A A++A + G PL +++AD + R
Sbjct: 67 KFSSREPALAAMSALSGNYVMRGCEQPLIIRFADPKRPR 105
>gi|47215644|emb|CAG01361.1| unnamed protein product [Tetraodon nigroviridis]
Length = 267
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 80/139 (57%), Gaps = 15/139 (10%)
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELE----------RLEHKLFIGMLPKNVSEAEV 119
D + AC+ + T P+QVK AD E + + KLF+GML K +E +V
Sbjct: 102 DGEMRACNGRMT-----RPIQVKPADSESRGAVSLSANCPKEDRKLFVGMLNKQQTEEDV 156
Query: 120 SALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVK 179
LF YG I++ +LRG SKGCAF+K+ T +A +A+ A++G M G+S LVVK
Sbjct: 157 YRLFEPYGVIEECTVLRGPDGNSKGCAFVKFSTHTEAQSAISALHGSQTMPGASSSLVVK 216
Query: 180 WADTEKERQARRAQKAQSQ 198
+ADT+KER RR Q+ Q
Sbjct: 217 FADTDKERTIRRMQQMVGQ 235
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+E KLFVG + K TE + +F+ + +++E +++ S+GC FV + EA
Sbjct: 137 KEDRKLFVGMLNKQQTEEDVYRLFEPYGVIEECTVLRGPDGN-SKGCAFVKFSTHTEAQS 195
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 196 AISALHGSQTMPGASSSLVVKFADTDKERTIRRM 229
>gi|328722645|ref|XP_003247623.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 2
[Acyrthosiphon pisum]
Length = 437
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 66/96 (68%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
E KLFIGML K +SE ++ +F +G I++ +LR SKGCAF+ Y TK+ A+AA++
Sbjct: 7 ERKLFIGMLSKKISEPDIRLMFEPFGAIEECSVLRDPNGVSKGCAFVTYTTKQNAIAAIK 66
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQS 197
++ MEG + PLVVK+ADT+KE+ +R Q+ Q+
Sbjct: 67 GMHHSQTMEGCTCPLVVKFADTQKEKDQKRMQQMQA 102
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 59/96 (61%), Gaps = 2/96 (2%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+S ER KLF+G + K ++E + MF+ F ++E ++++D S+GC FV ++Q A
Sbjct: 4 ASPER-KLFIGMLSKKISEPDIRLMFEPFGAIEECSVLRDPN-GVSKGCAFVTYTTKQNA 61
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A+ H+ +T+ G + PL VK+AD + E+ + ++
Sbjct: 62 IAAIKGMHHSQTMEGCTCPLVVKFADTQKEKDQKRM 97
>gi|328722643|ref|XP_001943968.2| PREDICTED: CUGBP Elav-like family member 2-like isoform 1
[Acyrthosiphon pisum]
Length = 389
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 66/96 (68%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
E KLFIGML K +SE ++ +F +G I++ +LR SKGCAF+ Y TK+ A+AA++
Sbjct: 7 ERKLFIGMLSKKISEPDIRLMFEPFGAIEECSVLRDPNGVSKGCAFVTYTTKQNAIAAIK 66
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQS 197
++ MEG + PLVVK+ADT+KE+ +R Q+ Q+
Sbjct: 67 GMHHSQTMEGCTCPLVVKFADTQKEKDQKRMQQMQA 102
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 59/96 (61%), Gaps = 2/96 (2%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+S ER KLF+G + K ++E + MF+ F ++E ++++D S+GC FV ++Q A
Sbjct: 4 ASPER-KLFIGMLSKKISEPDIRLMFEPFGAIEECSVLRDPNG-VSKGCAFVTYTTKQNA 61
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A+ H+ +T+ G + PL VK+AD + E+ + ++
Sbjct: 62 IAAIKGMHHSQTMEGCTCPLVVKFADTQKEKDQKRM 97
>gi|334326938|ref|XP_001363664.2| PREDICTED: CUGBP Elav-like family member 5-like [Monodelphis
domestica]
Length = 545
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 111/232 (47%), Gaps = 30/232 (12%)
Query: 88 PLQVKYADGELER-LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
P+QVK AD E + KLF+GML K SE +V LF +G I + +LRG SKGCA
Sbjct: 176 PIQVKPADSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGNSKGCA 235
Query: 147 FLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNAD 206
F+K+ + +A AA+ A++G M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 236 FVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIF---- 291
Query: 207 SQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQYRLPPMQNQPGFHGIIPPVNQGNAMRG 266
PSL LP PY+ Y + LMQ + + G + + P V
Sbjct: 292 --TPSL--TLPFS---PYSAY------AQALMQQQTTVLSTSHGSY-LSPGVAFSPCHIQ 337
Query: 267 ASPDLSSNMGPRNYAMPPSGFVGS---GYPAVPGLQYPM--------PYPGG 307
+S N P P SG G AVPGL P+ P+PGG
Sbjct: 338 QIGAVSLNGIPATPIAPASGLHSPPLLGTAAVPGLVTPITNGFAGVVPFPGG 389
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+ E + +R KLFVG + K +E +L +F+ F ++DE +++ S+GC FV
Sbjct: 182 ADSESRGGRDR-KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGN-SKGCAFVKF 239
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
S EA A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 240 SSHTEAQAAIHALHGSQTMPGASSSLVVKFADTDKERTLRRM 281
>gi|170061983|ref|XP_001866472.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167880043|gb|EDS43426.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 359
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 70/101 (69%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
E KLF+GML K +E +V LFS +G+I++ +LR SKGCAF+ + TK+ A+ A++
Sbjct: 3 ERKLFVGMLSKKYNENDVRQLFSGHGSIEECTVLRDPSGQSKGCAFVTFATKQAAIGAIK 62
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
A++ MEG S PLVVK+ADT+K++ A+R Q+ QS N+
Sbjct: 63 ALHQSKTMEGCSAPLVVKFADTQKDKDAKRMQQMQSNLWNI 103
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K E + +F ++E +++D + + S+GC FV ++Q A A+ A
Sbjct: 5 KLFVGMLSKKYNENDVRQLFSGHGSIEECTVLRDPSGQ-SKGCAFVTFATKQAAIGAIKA 63
Query: 76 CHNKKTLPGASSPLQVKYADGELER 100
H KT+ G S+PL VK+AD + ++
Sbjct: 64 LHQSKTMEGCSAPLVVKFADTQKDK 88
>gi|386769529|ref|NP_001245999.1| bruno-2, isoform H [Drosophila melanogaster]
gi|386769535|ref|NP_001246002.1| bruno-2, isoform J [Drosophila melanogaster]
gi|226371828|gb|ACO51539.1| MIP06224p [Drosophila melanogaster]
gi|383291457|gb|AFH03673.1| bruno-2, isoform H [Drosophila melanogaster]
gi|383291460|gb|AFH03676.1| bruno-2, isoform J [Drosophila melanogaster]
Length = 651
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 81/129 (62%), Gaps = 4/129 (3%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
E KLF+GML K +EA+V LF+ +GTI++ +LR SKGCAF+ + TK+ A+ A++
Sbjct: 139 ERKLFVGMLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQNAIGAIK 198
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQAN-NLPN---ADSQHPSLFGALP 217
A++ MEG S PLVVK+ADT+KE+ ++ Q+ + N P+ A + P++ A
Sbjct: 199 ALHQSQTMEGCSAPLVVKFADTQKEKDQKKMQQIHAFCGINTPSGATAGAATPTINAATA 258
Query: 218 MGYAPPYNG 226
+ APP G
Sbjct: 259 LIAAPPSAG 267
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
ER KLFVG + K TEA + +F ++E +++D+ + S+GC FV ++Q A A
Sbjct: 139 ER-KLFVGMLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQ-SKGCAFVTFATKQNAIGA 196
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+ A H +T+ G S+PL VK+AD + E+ + K+
Sbjct: 197 IKALHQSQTMEGCSAPLVVKFADTQKEKDQKKM 229
>gi|296222551|ref|XP_002757237.1| PREDICTED: CUGBP Elav-like family member 4-like [Callithrix
jacchus]
Length = 479
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 74/127 (58%), Gaps = 5/127 (3%)
Query: 77 HNKKTLPGASSPLQVKYADGELERL-----EHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
H + + GA +P + R+ + KLF+GML K SE +V LF +G I++
Sbjct: 115 HALQVMGGAGTPAPRHHGTTSSLRIGPVPKDRKLFVGMLNKQQSEDDVRRLFEAFGNIEE 174
Query: 132 LQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARR 191
ILRG SKGCAF+KY + +A AA+ A++G M G+S LVVK+ADT+KER RR
Sbjct: 175 CTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRR 234
Query: 192 AQKAQSQ 198
Q+ Q
Sbjct: 235 MQQMAGQ 241
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E + +F+ F ++E I++ S+GC FV S EA A+NA
Sbjct: 147 KLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGN-SKGCAFVKYSSHAEAQAAINA 205
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD + ER ++
Sbjct: 206 LHGSQTMPGASSSLVVKFADTDKERTMRRM 235
>gi|341875924|gb|EGT31859.1| hypothetical protein CAEBREN_30063 [Caenorhabditis brenneri]
Length = 382
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 67/97 (69%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLFIGML K SE +V LF+ +G + ++ +LRG+ SKGCAF+KY++ A A+
Sbjct: 25 DKKLFIGMLSKTQSEDDVRTLFAAFGELDEVTVLRGADGVSKGCAFVKYKSGFDAHMAIS 84
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
A++G M G+S LVVK+ADTE+ERQ RR Q+ +Q
Sbjct: 85 ALHGSQTMPGASSSLVVKYADTERERQNRRMQQMAAQ 121
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 81/157 (51%), Gaps = 8/157 (5%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
K + KLF+G + K +E + +F F +DEV +++ S+GC FV S +
Sbjct: 20 KDKMDDKKLFIGMLSKTQSEDDVRTLFAAFGELDEVTVLR-GADGVSKGCAFVKYKSGFD 78
Query: 69 ADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL-----FIGML-PKNVSEAEVSAL 122
A A++A H +T+PGASS L VKYAD E ER ++ +GML P V++ +
Sbjct: 79 AHMAISALHGSQTMPGASSSLVVKYADTERERQNRRMQQMAAQMGMLNPLLVNQVGLQ-Y 137
Query: 123 FSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAA 159
+ Y + Q L +Q ++ A+L ++ + AA
Sbjct: 138 NAAYQHVLQHQTLAAAQTSAASMAYLPLLQQQTSAAA 174
>gi|156368353|ref|XP_001627659.1| predicted protein [Nematostella vectensis]
gi|156214575|gb|EDO35559.1| predicted protein [Nematostella vectensis]
Length = 383
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 85/156 (54%), Gaps = 23/156 (14%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKLFVGQVP+ E L +F+ + + E+ I+KDK T +G + C + Q+
Sbjct: 20 VKLFVGQVPRTWEEKDLRPIFEPYGQIYELTILKDKYTGQHKG--WDACNAAQKH----- 72
Query: 75 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
H KKTLPG + KLF+GM+ K+ E ++ +FS +GTI++L +
Sbjct: 73 -LHEKKTLPGMD---------------DRKLFVGMISKHAKEEDLRVMFSPFGTIEELTV 116
Query: 135 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKME 170
LR + TSKGCAF+K+ + QA A+ ++ ME
Sbjct: 117 LRNADSTSKGCAFIKFANRMQAQNAIATMHNSTTME 152
>gi|157108555|ref|XP_001650282.1| hypothetical protein AaeL_AAEL000695 [Aedes aegypti]
gi|108884042|gb|EAT48267.1| AAEL000695-PA [Aedes aegypti]
Length = 368
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 70/101 (69%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
E KLF+GML K E +V LFS +G+I++ +LR + SKGCAF+ + TK+ A+ A++
Sbjct: 3 ERKLFVGMLSKKYHENDVRHLFSGHGSIEECTVLRDTSGQSKGCAFVTFATKQAAIGAIK 62
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
+++ MEG S PLVVK+ADT+K++ A+R Q+ QS N+
Sbjct: 63 SLHQSKTMEGCSAPLVVKFADTQKDKDAKRMQQMQSNLWNI 103
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
EER KLFVG + K E + +F ++E +++D T+ S+GC FV ++Q A
Sbjct: 2 EER-KLFVGMLSKKYHENDVRHLFSGHGSIEECTVLRD-TSGQSKGCAFVTFATKQAAIG 59
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELER 100
A+ + H KT+ G S+PL VK+AD + ++
Sbjct: 60 AIKSLHQSKTMEGCSAPLVVKFADTQKDK 88
>gi|444523808|gb|ELV13628.1| CUGBP Elav-like family member 4 [Tupaia chinensis]
Length = 325
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 64/97 (65%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+
Sbjct: 18 DRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAIN 77
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
A++G M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 78 ALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQ 114
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+E KLFVG + K +E + +F+ F ++E I++ S+GC FV S EA
Sbjct: 16 DEDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGN-SKGCAFVKYSSHAEAQA 74
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A+NA H +T+PGASS L VK+AD + ER ++
Sbjct: 75 AINALHGSQTMPGASSSLVVKFADTDKERTMRRM 108
>gi|449282137|gb|EMC89034.1| CUG-BP- and ETR-3-like factor 4, partial [Columba livia]
Length = 361
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 64/97 (65%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+
Sbjct: 8 DRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAIN 67
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
A++G M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 68 ALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQ 104
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E KLFVG + K +E + +F+ F ++E I++ S+GC FV S EA A
Sbjct: 7 EDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGN-SKGCAFVKYSSHAEAQAA 65
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+NA H +T+PGASS L VK+AD + ER ++
Sbjct: 66 INALHGSQTMPGASSSLVVKFADTDKERTMRRM 98
>gi|242013336|ref|XP_002427366.1| Splicing factor 3B subunit, putative [Pediculus humanus corporis]
gi|212511730|gb|EEB14628.1| Splicing factor 3B subunit, putative [Pediculus humanus corporis]
Length = 382
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 69/106 (65%)
Query: 89 LQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFL 148
L + Y + + KLF+GML K SE +V LF +G I++ ILRG + SKGCAF+
Sbjct: 23 LYLFYLIYNMIVTDRKLFVGMLSKQQSEEDVRQLFGPFGAIEECTILRGPEGASKGCAFV 82
Query: 149 KYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
K+ + ++A AA+ ++G M G+S LVVK+ADTEKERQ RR Q+
Sbjct: 83 KFSSHQEAQAAINNLHGSQTMPGASSSLVVKFADTEKERQLRRMQQ 128
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E + +F F ++E I++ AS+GC FV S QEA A+N
Sbjct: 38 KLFVGMLSKQQSEEDVRQLFGPFGAIEECTILRGPEG-ASKGCAFVKFSSHQEAQAAINN 96
Query: 76 CHNKKTLPGASSPLQVKYADGELER 100
H +T+PGASS L VK+AD E ER
Sbjct: 97 LHGSQTMPGASSSLVVKFADTEKER 121
>gi|294886537|ref|XP_002771747.1| DAZ-associated protein, putative [Perkinsus marinus ATCC 50983]
gi|239875509|gb|EER03563.1| DAZ-associated protein, putative [Perkinsus marinus ATCC 50983]
Length = 422
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 108/229 (47%), Gaps = 39/229 (17%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
MA + E S VKLFV +P H E+ L A+F+E+ +V++V I++D++T SRG F
Sbjct: 4 MAADRMESTS----VKLFVRGLPVHYPESDLRAVFEEYGMVEDVFILRDRSTMQSRGMAF 59
Query: 61 V---ICPSRQEADKAVNA---CHNKKT--------------LPGASSPLQVKYADGELER 100
V PS A KA+N HN T + PL V A GE ER
Sbjct: 60 VRFRDIPSGMAAIKALNGHRLSHNTSTSCIDNDVESVDDMSFDQSHIPLSVSLAQGEAER 119
Query: 101 L-----------EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLK 149
L + KLF+ L E E+ +F +G I ++ + G AF++
Sbjct: 120 LGMHGEVVATGGDTKLFVSGLGPATQEEELRTIFEPFGRINEVHVP-GPHAL---YAFVR 175
Query: 150 YETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
+ KE AL A+ +NG+ +EGS PL VK A++ + R A Q Q
Sbjct: 176 FAEKEDALKAIREVNGRVTVEGSQRPLEVKVAESRAAKADRNAHHHQQQ 224
>gi|402903006|ref|XP_003914376.1| PREDICTED: CUGBP Elav-like family member 4-like [Papio anubis]
Length = 500
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 64/97 (65%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+
Sbjct: 166 DRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAIN 225
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
A++G M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 226 ALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQ 262
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 6 KEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPS 65
+E E KLFVG + K +E + +F+ F ++E I++ S+GC FV S
Sbjct: 158 QESGQKGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGN-SKGCAFVKYSS 216
Query: 66 RQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
EA A+NA H +T+PGASS L VK+AD + ER ++
Sbjct: 217 HAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRM 256
>gi|339252334|ref|XP_003371390.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316968369|gb|EFV52650.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 427
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 74/118 (62%), Gaps = 7/118 (5%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK AD E + KLF+GML K +E ++ L +G +++ +LRG TSKGCAF
Sbjct: 4 PMQVKPADSESRGEDRKLFVGMLSKQQTEDDLRHLMEPHGHVEECTVLRGPDGTSKGCAF 63
Query: 148 LKYETKEQALAALEAINGKHKM-------EGSSVPLVVKWADTEKERQARRAQKAQSQ 198
+K+ +A AA+ A++G M +G+S LVVK+ADTEKERQ RR Q+ +Q
Sbjct: 64 VKFSCHLEAQAAIAALHGSQTMPVSWFECKGASSSLVVKFADTEKERQLRRMQQMAAQ 121
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 53/103 (51%), Gaps = 12/103 (11%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICP 64
+ +S E KLFVG + K TE L + + V+E +++ D T S+GC FV
Sbjct: 11 DSESRGEDRKLFVGMLSKQQTEDDLRHLMEPHGHVEECTVLRGPDGT---SKGCAFVKFS 67
Query: 65 SRQEADKAVNACHNKKTLP-------GASSPLQVKYADGELER 100
EA A+ A H +T+P GASS L VK+AD E ER
Sbjct: 68 CHLEAQAAIAALHGSQTMPVSWFECKGASSSLVVKFADTEKER 110
>gi|391330723|ref|XP_003739804.1| PREDICTED: CUGBP Elav-like family member 3-like [Metaseiulus
occidentalis]
Length = 484
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 82/146 (56%), Gaps = 12/146 (8%)
Query: 100 RLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAA 159
R E KLF+GML K +E ++ LF +G+I++ ILRG SKGCAF+K+ T +A+ A
Sbjct: 4 RQERKLFVGMLGKQQNEEDIRDLFQGFGSIEECTILRGPDGHSKGCAFVKFSTHNEAMNA 63
Query: 160 LEAINGKHKMEGSSVPLVVKWADTEKERQARR-AQKAQSQAN-------NLPNADSQHPS 211
+ A++G M G+S +VVK+ADTE+ERQ RR AQ Q + L N PS
Sbjct: 64 IAALHGSQTMPGASSTIVVKFADTERERQMRRMAQVGQVSLSVDGYFYFQLANIGQLCPS 123
Query: 212 LFGALPMGYAPPYNGYGYQASGSYGL 237
L G +N Q+ GS+ +
Sbjct: 124 LVGPFAKSLLQQFN----QSYGSFTI 145
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 2/94 (2%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
+ER KLFVG + K E + +F+ F ++E I++ S+GC FV + EA
Sbjct: 5 QER-KLFVGMLGKQQNEEDIRDLFQGFGSIEECTILRGPDGH-SKGCAFVKFSTHNEAMN 62
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A+ A H +T+PGASS + VK+AD E ER ++
Sbjct: 63 AIAALHGSQTMPGASSTIVVKFADTERERQMRRM 96
>gi|403276016|ref|XP_003929713.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 344
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 78/138 (56%), Gaps = 9/138 (6%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK A E + KLF+GML K E +V LF +G I++ +LR TSKGCAF
Sbjct: 4 PIQVKPAASEGRGEDRKLFVGMLGKQQDEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAF 63
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS 207
+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER RR Q+ Q
Sbjct: 64 VKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERALRRMQQMAGQLGAF----- 118
Query: 208 QHPSLFGALPMGYAPPYN 225
HP+ LP+G Y
Sbjct: 119 -HPA---PLPLGACSAYT 132
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E KLFVG + K E + +F+ F ++E +++ S+GC FV S+ EA A
Sbjct: 17 EDRKLFVGMLGKQQDEEDVRRLFQPFGHIEECTVLRSPDG-TSKGCAFVKFGSQGEAQAA 75
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+ H +T+ GASS L VK AD + ER ++
Sbjct: 76 IQGLHGSRTMAGASSSLVVKLADTDRERALRRM 108
>gi|26329793|dbj|BAC28635.1| unnamed protein product [Mus musculus]
gi|34784979|gb|AAH57083.1| Brunol6 protein [Mus musculus]
Length = 345
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 78/138 (56%), Gaps = 9/138 (6%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK A E + KLF+GML K E +V LF +G I++ +LR TSKGCAF
Sbjct: 4 PIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAF 63
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS 207
+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER RR Q+ Q
Sbjct: 64 VKFGSQGEAQAAIQGLHGSRTMTGASSSLVVKLADTDRERALRRMQQMAGQLGAF----- 118
Query: 208 QHPSLFGALPMGYAPPYN 225
HP+ LP+G Y
Sbjct: 119 -HPA---PLPLGACGAYT 132
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICPSRQEAD 70
E KLFVG + K E + +F+ F ++E +++ D T S+GC FV S+ EA
Sbjct: 17 EDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGT---SKGCAFVKFGSQGEAQ 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A+ H +T+ GASS L VK AD + ER ++
Sbjct: 74 AAIQGLHGSRTMTGASSSLVVKLADTDRERALRRM 108
>gi|256052032|ref|XP_002569583.1| bruno-like rna binding protein [Schistosoma mansoni]
gi|350646169|emb|CCD59153.1| bruno-like rna binding protein [Schistosoma mansoni]
Length = 682
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 67/99 (67%), Gaps = 1/99 (1%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K+ +E ++ LF+ YG I++ ILR SKGCAF+K+ + +A A++
Sbjct: 99 DRKLFVGMLGKHQTEKDIQNLFAPYGLIEECTILRDQNGLSKGCAFVKFSSSTEAANAID 158
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQAN 200
++ M+G+S PLVVK+ADTEKERQ R+ Q QS N
Sbjct: 159 HMHNSQTMQGASSPLVVKFADTEKERQVRK-QHQQSTTN 196
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
E KLFVG + KH TE + +F + L++E I++D+ S+GC FV S EA
Sbjct: 97 HEDRKLFVGMLGKHQTEKDIQNLFAPYGLIEECTILRDQN-GLSKGCAFVKFSSSTEAAN 155
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELER 100
A++ HN +T+ GASSPL VK+AD E ER
Sbjct: 156 AIDHMHNSQTMQGASSPLVVKFADTEKER 184
>gi|332375404|gb|AEE62843.1| unknown [Dendroctonus ponderosae]
Length = 361
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 66/100 (66%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
E KLF+GML K E +V ALFS GTI++ +LR S+GCAF+ + K AL A++
Sbjct: 38 ERKLFVGMLSKKFCENDVRALFSGVGTIEECTVLRDPAGNSRGCAFVTFSNKHAALLAIK 97
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANN 201
+++ MEG S PLVVK+ADT+KE++ +R Q+ Q+ N
Sbjct: 98 SLHQSQTMEGCSAPLVVKFADTQKEKELKRHQQMQASVWN 137
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K E + A+F ++E +++D SRGC FV ++ A A+ +
Sbjct: 40 KLFVGMLSKKFCENDVRALFSGVGTIEECTVLRDPAGN-SRGCAFVTFSNKHAALLAIKS 98
Query: 76 CHNKKTLPGASSPLQVKYADGELER 100
H +T+ G S+PL VK+AD + E+
Sbjct: 99 LHQSQTMEGCSAPLVVKFADTQKEK 123
>gi|335292430|ref|XP_003356729.1| PREDICTED: CUGBP, Elav-like family member 6 isoform 2 [Sus scrofa]
Length = 344
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 79/138 (57%), Gaps = 9/138 (6%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK A E + KLF+GML K E +V LF +G I++ +LR TSKGCAF
Sbjct: 4 PIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAF 63
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS 207
+K+ ++ +A AA+++++G M G+S LVVK ADT++ER RR Q+ Q
Sbjct: 64 VKFGSQGEAQAAIQSLHGSRTMAGASSSLVVKLADTDRERALRRMQQMAGQLGAF----- 118
Query: 208 QHPSLFGALPMGYAPPYN 225
HP+ LP+G Y
Sbjct: 119 -HPA---PLPLGACGAYT 132
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICPSRQEAD 70
E KLFVG + K E + +F+ F ++E +++ D T S+GC FV S+ EA
Sbjct: 17 EDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGT---SKGCAFVKFGSQGEAQ 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A+ + H +T+ GASS L VK AD + ER ++
Sbjct: 74 AAIQSLHGSRTMAGASSSLVVKLADTDRERALRRM 108
>gi|327291733|ref|XP_003230575.1| PREDICTED: CUGBP Elav-like family member 5-like, partial [Anolis
carolinensis]
Length = 365
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 76/138 (55%), Gaps = 17/138 (12%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K SE ++ LF +G I + +LRG SKGCAF+K+ + +A AA+
Sbjct: 1 DRKLFVGMLNKQQSEEDILRLFEPFGAIDECTVLRGPDGNSKGCAFVKFSSHTEAQAAIH 60
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYA 221
A++G M G+S LVVK+ADT+KER RR Q+ Q G L +A
Sbjct: 61 ALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQ--------------LGILTPSFA 106
Query: 222 PPYNGYGYQASGSYGLMQ 239
P++ YG A LMQ
Sbjct: 107 LPFSPYGAYAQ---ALMQ 121
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E +L +F+ F +DE +++ S+GC FV S EA A++A
Sbjct: 3 KLFVGMLNKQQSEEDILRLFEPFGAIDECTVLRGPDGN-SKGCAFVKFSSHTEAQAAIHA 61
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD + ER ++
Sbjct: 62 LHGSQTMPGASSSLVVKFADTDKERTLRRM 91
>gi|397496989|ref|XP_003819302.1| PREDICTED: CUGBP Elav-like family member 5 [Pan paniscus]
Length = 433
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 74/126 (58%), Gaps = 11/126 (8%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+
Sbjct: 81 DRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIH 140
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYA 221
A++G M G+S LVVK+ADT+KER RR Q+ Q L PSL LP
Sbjct: 141 ALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIL------TPSL--TLPFS-- 190
Query: 222 PPYNGY 227
PY+ Y
Sbjct: 191 -PYSAY 195
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV S EA A++A
Sbjct: 83 KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKFSSHTEAQAAIHA 141
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD + ER ++
Sbjct: 142 LHGSQTMPGASSSLVVKFADTDKERTLRRM 171
>gi|410960908|ref|XP_003987029.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Felis catus]
Length = 344
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 79/138 (57%), Gaps = 9/138 (6%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK A E + KLF+GML K E +V LF +G I++ +LR TSKGCAF
Sbjct: 4 PIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAF 63
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADS 207
+K+ ++ +A AA+++++G M G+S LVVK ADT++ER RR Q+ Q
Sbjct: 64 VKFGSQGEAQAAIQSLHGSRTMAGASSSLVVKLADTDRERALRRMQQMAGQLGAF----- 118
Query: 208 QHPSLFGALPMGYAPPYN 225
HP+ LP+G Y
Sbjct: 119 -HPA---PLPLGACGAYT 132
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICPSRQEAD 70
E KLFVG + K E + +F+ F ++E +++ D T S+GC FV S+ EA
Sbjct: 17 EDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGT---SKGCAFVKFGSQGEAQ 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A+ + H +T+ GASS L VK AD + ER ++
Sbjct: 74 AAIQSLHGSRTMAGASSSLVVKLADTDRERALRRM 108
>gi|269868218|gb|ACZ52415.1| Bruno-3 transcript variant 1, partial [Drosophila pseudoobscura]
Length = 415
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 78/135 (57%), Gaps = 21/135 (15%)
Query: 89 LQVKYADGEL--ERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCA 146
LQ+K A+ E E L+ KLF+GML K +E +V +F +G+I++ ILRG TSKGCA
Sbjct: 25 LQLKPAENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGTSKGCA 84
Query: 147 FLKYETKEQALAALEAINGKHKME-------------------GSSVPLVVKWADTEKER 187
F+K+ T+++A +A+ ++G M G+S LVVK+ADTEKER
Sbjct: 85 FVKFGTQQEAQSAIANLHGSQTMPVCTTNLHSSKDINPLPYSGGASSSLVVKYADTEKER 144
Query: 188 QARRAQKAQSQANNL 202
Q RR Q+ N L
Sbjct: 145 QIRRMQQMAGHMNLL 159
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 57/118 (48%), Gaps = 24/118 (20%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFV 61
++ E +S KLFVG + K TE + +F F ++E I++ D T S+GC FV
Sbjct: 30 AENESRSEHLDRKLFVGMLSKQQTEDDVRQIFHPFGSIEECTILRGPDGT---SKGCAFV 86
Query: 62 ICPSRQEADKAVNACHNKKTLP-------------------GASSPLQVKYADGELER 100
++QEA A+ H +T+P GASS L VKYAD E ER
Sbjct: 87 KFGTQQEAQSAIANLHGSQTMPVCTTNLHSSKDINPLPYSGGASSSLVVKYADTEKER 144
>gi|332236066|ref|XP_003267226.1| PREDICTED: CUGBP Elav-like family member 6 isoform 3 [Nomascus
leucogenys]
Length = 344
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 69/107 (64%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK A E + KLF+GML K E +V LF +G I++ +LR TSKGCAF
Sbjct: 4 PIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAF 63
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER RR Q+
Sbjct: 64 VKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERALRRMQQ 110
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E KLFVG + K E + +F+ F ++E +++ S+GC FV S+ EA A
Sbjct: 17 EDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDG-TSKGCAFVKFGSQGEAQAA 75
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+ H +T+ GASS L VK AD + ER ++
Sbjct: 76 IQGLHGSRTMAGASSSLVVKLADTDRERALRRM 108
>gi|325562907|gb|ADZ31337.1| cell size RNA recognition motif 2 [synthetic construct]
Length = 103
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 70/101 (69%), Gaps = 3/101 (2%)
Query: 88 PLQVKYADGELER---LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKG 144
P+QV+YADGE ER +EHKLF+ L K + E+ +F+ YG ++D+ I++ + S+G
Sbjct: 3 PIQVRYADGERERHGAIEHKLFVASLNKQATAKEIEEIFAPYGHVEDVYIMKDGMRQSRG 62
Query: 145 CAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
C F+K+ ++E ALAA+ A++G + M G PL++++AD ++
Sbjct: 63 CGFVKFSSREPALAAMSALSGNYVMRGCEQPLIIRFADPKR 103
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Query: 2 AESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFV 61
A+ ++E+ + E KLFV + K T ++ +F + V++V I+KD R SRGC FV
Sbjct: 9 ADGERERHGAIEH-KLFVASLNKQATAKEIEEIFAPYGHVEDVYIMKD-GMRQSRGCGFV 66
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYAD 95
SR+ A A++A + G PL +++AD
Sbjct: 67 KFSSREPALAAMSALSGNYVMRGCEQPLIIRFAD 100
>gi|426379621|ref|XP_004056490.1| PREDICTED: CUGBP Elav-like family member 6 isoform 3 [Gorilla
gorilla gorilla]
Length = 344
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 69/107 (64%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK A E + KLF+GML K E +V LF +G I++ +LR TSKGCAF
Sbjct: 4 PIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAF 63
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER RR Q+
Sbjct: 64 VKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERALRRMQQ 110
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E KLFVG + K E + +F+ F ++E +++ S+GC FV S+ EA A
Sbjct: 17 EDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDG-TSKGCAFVKFGSQGEAQAA 75
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+ H +T+ GASS L VK AD + ER ++
Sbjct: 76 IQGLHGSRTMAGASSSLVVKLADTDRERALRRM 108
>gi|431922279|gb|ELK19370.1| CUG-BP- and ETR-3-like factor 5 [Pteropus alecto]
Length = 377
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 74/126 (58%), Gaps = 11/126 (8%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+
Sbjct: 53 DRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIH 112
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYA 221
A++G M G+S LVVK+ADT+KER RR Q+ Q L PSL LP
Sbjct: 113 ALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIL------TPSL--TLPFS-- 162
Query: 222 PPYNGY 227
PY+ Y
Sbjct: 163 -PYSAY 167
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV S EA A++A
Sbjct: 55 KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKFSSHTEAQAAIHA 113
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD + ER ++
Sbjct: 114 LHGSQTMPGASSSLVVKFADTDKERTLRRM 143
>gi|332844222|ref|XP_003314797.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Pan
troglodytes]
Length = 345
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 69/107 (64%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK A E + KLF+GML K E +V LF +G I++ +LR TSKGCAF
Sbjct: 4 PIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAF 63
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
+K+ ++ +A AA++ ++G M G+S LVVK ADT++ER RR Q+
Sbjct: 64 VKFGSQGEAQAAIQGLHGSRTMAGASSSLVVKLADTDRERALRRMQQ 110
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E KLFVG + K E + +F+ F ++E +++ S+GC FV S+ EA A
Sbjct: 17 EDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDG-TSKGCAFVKFGSQGEAQAA 75
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+ H +T+ GASS L VK AD + ER ++
Sbjct: 76 IQGLHGSRTMAGASSSLVVKLADTDRERALRRM 108
>gi|12239369|gb|AAG49448.1|AF141345_1 LYST-interacting protein LIP9 [Homo sapiens]
Length = 213
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 65/105 (61%)
Query: 94 ADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETK 153
A G+ R + KLF+GML K SE +V LF +G I++ ILRG SKGCAF+KY +
Sbjct: 26 ACGQRXRGDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSH 85
Query: 154 EQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
+A A++G M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 86 AEARPPFNALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMVGQ 130
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E + +F+ F ++E I++ S+GC FV S EA NA
Sbjct: 36 KLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGN-SKGCAFVKYSSHAEARPPFNA 94
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD + ER ++
Sbjct: 95 LHGSQTMPGASSSLVVKFADTDKERTMRRM 124
>gi|294877840|ref|XP_002768153.1| hypothetical protein Pmar_PMAR002941 [Perkinsus marinus ATCC 50983]
gi|239870350|gb|EER00871.1| hypothetical protein Pmar_PMAR002941 [Perkinsus marinus ATCC 50983]
Length = 996
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 96/189 (50%), Gaps = 10/189 (5%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTT-RASRGCCFVICPSRQEADKAV 73
V+LFVG++P E + +F+ + V EV +I+ K + GC FV + EA A+
Sbjct: 9 VRLFVGKLPAAWNEQNIRDLFEAYGEVQEVGLIRPKENGKQQTGCAFVKFGAVHEAATAI 68
Query: 74 NACHNKKTLPGASSPLQVKYADGELERL---------EHKLFIGMLPKNVSEAEVSALFS 124
+ + AS +QV++A+GE ERL KLF+G + + EA+ F
Sbjct: 69 KSLNGTYKADDASGFVQVQFANGEPERLGLPEDTEGYSQKLFVGNVSSLLFEAKAMLFFP 128
Query: 125 IYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
YG + + L + + AF+++ K AL A++A+N K+ G P+ VK ADT
Sbjct: 129 RYGNVTEAYSLESKRASGNKAAFVRFSKKSDALKAIDALNDKYTFPGEPHPITVKCADTR 188
Query: 185 KERQARRAQ 193
++R A + +
Sbjct: 189 EQRLAHKQE 197
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 57/92 (61%), Gaps = 6/92 (6%)
Query: 100 RLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR----GSQQTSKGCAFLKYETKEQ 155
R+ +LF+G LP +E + LF YG ++++ ++R G QQT GCAF+K+ +
Sbjct: 6 RIPVRLFVGKLPAAWNEQNIRDLFEAYGEVQEVGLIRPKENGKQQT--GCAFVKFGAVHE 63
Query: 156 ALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
A A++++NG +K + +S + V++A+ E ER
Sbjct: 64 AATAIKSLNGTYKADDASGFVQVQFANGEPER 95
>gi|289547743|ref|NP_001166156.1| CUGBP Elav-like family member 6 isoform 3 [Homo sapiens]
gi|194377382|dbj|BAG57639.1| unnamed protein product [Homo sapiens]
Length = 344
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 68/107 (63%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+QVK A E + KLF+GML K E +V LF +G I++ +LR TSKGCAF
Sbjct: 4 PIQVKPAASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAF 63
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
+K+ ++ +A AA+ ++G M G+S LVVK ADT++ER RR Q+
Sbjct: 64 VKFGSQGEAQAAIRGLHGSRTMAGASSSLVVKLADTDRERALRRMQQ 110
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E KLFVG + K E + +F+ F ++E +++ S+GC FV S+ EA A
Sbjct: 17 EDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDG-TSKGCAFVKFGSQGEAQAA 75
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+ H +T+ GASS L VK AD + ER ++
Sbjct: 76 IRGLHGSRTMAGASSSLVVKLADTDRERALRRM 108
>gi|359067200|ref|XP_003586320.1| PREDICTED: CUGBP, Elav-like family member 5 [Bos taurus]
Length = 685
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 74/126 (58%), Gaps = 11/126 (8%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+
Sbjct: 333 DRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIH 392
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYA 221
A++G M G+S LVVK+ADT+KER RR Q+ Q L PSL LP
Sbjct: 393 ALHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIL------TPSL--TLPFS-- 442
Query: 222 PPYNGY 227
PY+ Y
Sbjct: 443 -PYSAY 447
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV S EA A++A
Sbjct: 335 KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKFSSHTEAQAAIHA 393
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H +T+PGASS L VK+AD + ER ++
Sbjct: 394 LHGSQTMPGASSSLVVKFADTDKERTLRRM 423
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 12/99 (12%)
Query: 50 KTTRASR-GCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYA-----------DGE 97
+ R R GC F+ +R A KA A H +KTLPG P DG
Sbjct: 106 RAIRGHRIGCAFLTYCARDSAIKAQTALHEQKTLPGLLQPRPSPVGSSGPEPPGGQPDGT 165
Query: 98 LERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR 136
+ KLF+G +P+N+ E ++ LF +G I +L +L+
Sbjct: 166 KDLDAIKLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLK 204
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 30/46 (65%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGC 58
+ +KLFVGQ+P+++ E L +F++F + E+ ++KD T + C
Sbjct: 169 DAIKLFVGQIPRNLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKDC 214
>gi|47215209|emb|CAG01416.1| unnamed protein product [Tetraodon nigroviridis]
Length = 431
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 64/97 (65%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K SE +V LF +G I++ ILRG SKGCAF+K+ + +A AA+
Sbjct: 130 DRKLFVGMLNKQQSEDDVRRLFESFGCIEECTILRGPDGNSKGCAFVKFSSHAEAQAAIS 189
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
A++G M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 190 ALHGSQTMPGASSSLVVKFADTDKERTIRRMQQMAGQ 226
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 57/95 (60%), Gaps = 2/95 (2%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
SE+R KLFVG + K +E + +F+ F ++E I++ S+GC FV S EA
Sbjct: 128 SEDR-KLFVGMLNKQQSEDDVRRLFESFGCIEECTILRGPDGN-SKGCAFVKFSSHAEAQ 185
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
A++A H +T+PGASS L VK+AD + ER ++
Sbjct: 186 AAISALHGSQTMPGASSSLVVKFADTDKERTIRRM 220
>gi|260787640|ref|XP_002588860.1| hypothetical protein BRAFLDRAFT_89423 [Branchiostoma floridae]
gi|229274031|gb|EEN44871.1| hypothetical protein BRAFLDRAFT_89423 [Branchiostoma floridae]
Length = 204
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
Query: 99 ERLE-HKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQAL 157
ER+E KLF+GML K +E +V LF +GTI++ ILRG SKGCAF+K+ + +A
Sbjct: 25 ERVEDRKLFVGMLGKQQTEEDVRRLFDPFGTIEECTILRGPDGQSKGCAFVKFSSHAEAQ 84
Query: 158 AALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
AA+ ++G M G+S +VVK+ADT+KERQ R+ Q+
Sbjct: 85 AAINNLHGSQTMPGASSSIVVKFADTDKERQLRKMQQ 121
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 58/102 (56%), Gaps = 2/102 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+ + + E+R KLFVG + K TE + +F F ++E I++ + S+GC FV
Sbjct: 20 TMRHAERVEDR-KLFVGMLGKQQTEEDVRRLFDPFGTIEECTILRGPDGQ-SKGCAFVKF 77
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
S EA A+N H +T+PGASS + VK+AD + ER K+
Sbjct: 78 SSHAEAQAAINNLHGSQTMPGASSSIVVKFADTDKERQLRKM 119
>gi|242003642|ref|XP_002436197.1| conserved hypothetical protein [Ixodes scapularis]
gi|215499533|gb|EEC09027.1| conserved hypothetical protein [Ixodes scapularis]
Length = 170
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 70/103 (67%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
E KLFIGML K +E++V +FS +G+I++ +LR SKGCAF+ Y +++ A+ A++
Sbjct: 6 ERKLFIGMLAKECNESDVRVMFSPFGSIEECTVLRDGSGQSKGCAFVTYASRQCAINAIK 65
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPN 204
A+N M+G + P+VVK+ADT+KE++ +R Q+ + + N
Sbjct: 66 AMNHSQTMKGCNNPMVVKFADTQKEKEQKRQQQVMTNLWTMAN 108
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLF+G + K E+ + MF F ++E +++D + + S+GC FV SRQ A A+ A
Sbjct: 8 KLFIGMLAKECNESDVRVMFSPFGSIEECTVLRDGSGQ-SKGCAFVTYASRQCAINAIKA 66
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHK 104
++ +T+ G ++P+ VK+AD + E+ + +
Sbjct: 67 MNHSQTMKGCNNPMVVKFADTQKEKEQKR 95
>gi|358340719|dbj|GAA48557.1| CUG-BP- and ETR3-like factor [Clonorchis sinensis]
Length = 675
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 64/93 (68%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
E KLF+GML K E +V LF +GTI++ ILR SKGCAF+K+ ++++A +A+
Sbjct: 170 ERKLFVGMLSKQQGEEDVRRLFEPFGTIEECTILRDQSGNSKGCAFVKFSSQQEAQSAIL 229
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
A++G M G+S +VVK+AD+EKER R+ Q+
Sbjct: 230 ALHGSQTMPGASSSIVVKFADSEKERHTRKIQQ 262
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 2 AESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFV 61
A +++EER KLFVG + K E + +F+ F ++E I++D++ S+GC FV
Sbjct: 159 ASQSNSAQNNEER-KLFVGMLSKQQGEEDVRRLFEPFGTIEECTILRDQSGN-SKGCAFV 216
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
S+QEA A+ A H +T+PGASS + VK+AD E ER K+
Sbjct: 217 KFSSQQEAQSAILALHGSQTMPGASSSIVVKFADSEKERHTRKI 260
>gi|146197847|dbj|BAF57635.1| bruno-like protein [Dugesia japonica]
Length = 402
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 77/139 (55%), Gaps = 22/139 (15%)
Query: 84 GASSPLQVKYADGELERL----------------EHKLFIGMLPKNVSEAEVSALFSIYG 127
G PLQVK A L + E KLF+GML KN ++ V +F+ +G
Sbjct: 2 GTRRPLQVKPAKNNLTKKTNMNTLNQLGENIASDERKLFVGMLSKNQTDENVQNMFTKFG 61
Query: 128 TIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
I++ +L+ SKGCAF+K+ A AA+ A++ KMEG+S LVVK+ADT+K++
Sbjct: 62 KIEECTVLKDQNGNSKGCAFVKFLNHTDARAAINALHASQKMEGASSSLVVKFADTDKQK 121
Query: 188 QARRAQKAQSQANNLPNAD 206
Q R+ Q+ NLP+ +
Sbjct: 122 QIRKLQQ------NLPDLN 134
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
E +S+ER KLFVG + K+ T+ + MF +F ++E ++KD+ S+GC FV +
Sbjct: 30 ENIASDER-KLFVGMLSKNQTDENVQNMFTKFGKIEECTVLKDQNGN-SKGCAFVKFLNH 87
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+A A+NA H + + GASS L VK+AD + ++ KL
Sbjct: 88 TDARAAINALHASQKMEGASSSLVVKFADTDKQKQIRKL 126
>gi|294884851|gb|ADF47436.1| trinucleotide repeat containing 4-like protein [Dugesia japonica]
Length = 460
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 63/93 (67%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLFIGML K +E +V +F +G I++ ILR SKGCAF+KY T+ +A A+
Sbjct: 48 DRKLFIGMLGKQHTEDDVRDMFKPFGMIEECTILRDQNGNSKGCAFVKYTTRSEAYTAIG 107
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
A++G + G+S LVVK+ADTEKERQ R+ Q+
Sbjct: 108 AMHGSMTIPGASSSLVVKFADTEKERQTRKLQQ 140
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 61/101 (60%), Gaps = 2/101 (1%)
Query: 5 KKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICP 64
K+ + E+R KLF+G + K TE + MFK F +++E I++D+ S+GC FV
Sbjct: 40 KQTQHKGEDR-KLFIGMLGKQHTEDDVRDMFKPFGMIEECTILRDQNGN-SKGCAFVKYT 97
Query: 65 SRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+R EA A+ A H T+PGASS L VK+AD E ER KL
Sbjct: 98 TRSEAYTAIGAMHGSMTIPGASSSLVVKFADTEKERQTRKL 138
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 105 LFIGMLPKNVSEAEVSALFSIYGTI--KDLQILRGSQQTSKGCAFLKYETKEQALAALEA 162
+FI LP+ +AE++ +FS +GT+ + I R + Q SK F+ ++ A AA++A
Sbjct: 375 VFIYHLPQEFGDAELAQMFSPFGTVISAKVYIDRATNQ-SKCFGFVSFDNSNSAQAAIQA 433
Query: 163 ING 165
+NG
Sbjct: 434 MNG 436
>gi|195148190|ref|XP_002015057.1| GL18622 [Drosophila persimilis]
gi|194107010|gb|EDW29053.1| GL18622 [Drosophila persimilis]
Length = 398
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
E KLF+GML K ++E +V LF ++G I++ +LR SKGCAF+ + TK A++A++
Sbjct: 29 ERKLFVGMLNKKLNENDVRKLFEVHGNIEECTVLRDQNGQSKGCAFVTFATKHAAISAIK 88
Query: 162 AINGKHK-MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
++K MEG + PLVVK+ADT+KE++ ++ Q+ Q+ NL
Sbjct: 89 VTLSQNKIMEGCTSPLVVKFADTQKEKEQKKIQQIQANLWNL 130
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
S+ ER KLFVG + K + E + +F+ ++E +++D+ + S+GC FV ++ A
Sbjct: 26 SAGER-KLFVGMLNKKLNENDVRKLFEVHGNIEECTVLRDQNGQ-SKGCAFVTFATKHAA 83
Query: 70 DKAVNACHNK-KTLPGASSPLQVKYADGELERLEHKL 105
A+ ++ K + G +SPL VK+AD + E+ + K+
Sbjct: 84 ISAIKVTLSQNKIMEGCTSPLVVKFADTQKEKEQKKI 120
>gi|405967996|gb|EKC33105.1| CUG-BP- and ETR-3-like factor 4 [Crassostrea gigas]
Length = 349
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 62/93 (66%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K +E +V LF +G I++ ILR SKGCAF+K+ +A +A+
Sbjct: 37 DRKLFVGMLNKQQTEDDVRQLFQPFGNIEECTILRDQNGNSKGCAFVKFSGHNEAQSAIN 96
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
A++G M G+S LVVK+ADTEKERQ RR Q+
Sbjct: 97 ALHGSQTMPGASSSLVVKFADTEKERQLRRMQQ 129
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 59/100 (59%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
+A K SS+E KLFVG + K TE + +F+ F ++E I++D+ S+GC F
Sbjct: 24 VAWQTTNKLSSDEDRKLFVGMLNKQQTEDDVRQLFQPFGNIEECTILRDQNGN-SKGCAF 82
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V EA A+NA H +T+PGASS L VK+AD E ER
Sbjct: 83 VKFSGHNEAQSAINALHGSQTMPGASSSLVVKFADTEKER 122
>gi|321464387|gb|EFX75395.1| sex-lethal protein variant 2 [Daphnia pulex]
Length = 297
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 100/179 (55%), Gaps = 8/179 (4%)
Query: 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
R L + +P+++TE++L MF V I++D T S G FV + Q+AD A+
Sbjct: 26 RTNLIINYLPQNLTESELFKMFVTIGTVTNCKIMRDFRTGYSYGFGFV---NYQKADDAI 82
Query: 74 NACHNKKTLPGASSPLQVKYAD--GELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKD 131
A L + ++V YA GE +R E L++ LP++V+E E++ +FS +G I
Sbjct: 83 RAIQTLNGLQIQNKRIKVSYARPPGE-DRKETNLYVTNLPRDVTEDELTNIFSAHGNIVQ 141
Query: 132 LQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ +L+ +G AF++++ +E+ALAA+E +NG G + P+ VK A+ +++A
Sbjct: 142 MNLLKDKITGMPRGVAFVRFDKREEALAAIEHLNGTIP-HGRTNPISVKIAEEHGKQKA 199
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+ L+V +P+ +TE +L +F + ++N++KDK T RG FV R+EA
Sbjct: 109 DRKETNLYVTNLPRDVTEDELTNIFSAHGNIVQMNLLKDKITGMPRGVAFVRFDKREEAL 168
Query: 71 KAVNACHNKKTLP-GASSPLQVKYAD 95
A+ H T+P G ++P+ VK A+
Sbjct: 169 AAIE--HLNGTIPHGRTNPISVKIAE 192
>gi|442762665|gb|JAA73491.1| Putative rna-binding protein cugbp1/bruno rrm superfamily, partial
[Ixodes ricinus]
Length = 110
Score = 93.6 bits (231), Expect = 1e-16, Method: Composition-based stats.
Identities = 48/105 (45%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
S +++ + +K+FVGQ+P+ E L MF++F V ++N+++DK T SRGCCFV
Sbjct: 3 SPGKEQPDPDAIKMFVGQIPRSWDENDLKKMFEDFGPVYQINVLRDKATGTSRGCCFVTF 62
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIG 108
+R+ A A N HN KTLPG P+Q+K AD E R E KLFIG
Sbjct: 63 YTRKSALDAQNDLHNMKTLPGMHHPIQMKPADSE-NRNERKLFIG 106
Score = 50.8 bits (120), Expect = 0.001, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEA 162
K+F+G +P++ E ++ +F +G + + +LR + TS+GC F+ + T++ AL A
Sbjct: 15 KMFVGQIPRSWDENDLKKMFEDFGPVYQINVLRDKATGTSRGCCFVTFYTRKSALDAQND 74
Query: 163 INGKHKMEGSSVPLVVKWADTEKERQAR 190
++ + G P+ +K AD+E + +
Sbjct: 75 LHNMKTLPGMHHPIQMKPADSENRNERK 102
>gi|402593619|gb|EJW87546.1| hypothetical protein WUBG_01540 [Wuchereria bancrofti]
Length = 149
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+++ E L +F+ F + E I+KDK T +GC F+ R A +
Sbjct: 24 DTIKLFVGQIPRNLEEKDLRHLFETFGKIYEFTILKDKYTGLHKGCAFLTYCHRDSAIRC 83
Query: 73 VNACHNKKTLPGASSPLQVKYADGELE------RLEHKLFIGMLPKNVSEAEVSALFSIY 126
A H++KTLPG + +QVK AD E E KLF+GML K +E +V +LF+ +
Sbjct: 84 QAALHDQKTLPGMNRAMQVKPADNESRPDSPKNAEERKLFVGMLSKQHNEDDVRSLFAPF 143
Query: 127 GTIKDL 132
G I ++
Sbjct: 144 GVIDEV 149
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEA 162
KLF+G +P+N+ E ++ LF +G I + IL+ KGCAFL Y ++ A+ A
Sbjct: 27 KLFVGQIPRNLEEKDLRHLFETFGKIYEFTILKDKYTGLHKGCAFLTYCHRDSAIRCQAA 86
Query: 163 INGKHKMEGSSVPLVVKWADTE 184
++ + + G + + VK AD E
Sbjct: 87 LHDQKTLPGMNRAMQVKPADNE 108
>gi|340725302|ref|XP_003401011.1| PREDICTED: CUGBP Elav-like family member 4-like isoform 4 [Bombus
terrestris]
Length = 360
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 61/86 (70%)
Query: 109 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 168
ML K +E +V LF+ +GTI++ ILRG +S+GCAF+K + ++ALAA+ ++G
Sbjct: 1 MLSKQQTEDDVRQLFTAFGTIEECTILRGPDGSSRGCAFVKLSSHQEALAAINTLHGSQT 60
Query: 169 MEGSSVPLVVKWADTEKERQARRAQK 194
M G+S LVVK+ADTEKERQ RR Q+
Sbjct: 61 MPGASSSLVVKFADTEKERQLRRMQQ 86
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 24 KHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLP 83
K TE + +F F ++E I++ +SRGC FV S QEA A+N H +T+P
Sbjct: 4 KQQTEDDVRQLFTAFGTIEECTILRGPDG-SSRGCAFVKLSSHQEALAAINTLHGSQTMP 62
Query: 84 GASSPLQVKYADGELERLEHKL 105
GASS L VK+AD E ER ++
Sbjct: 63 GASSSLVVKFADTEKERQLRRM 84
>gi|47212399|emb|CAF96701.1| unnamed protein product [Tetraodon nigroviridis]
Length = 795
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 89/152 (58%), Gaps = 4/152 (2%)
Query: 88 PLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGC 145
P+Q+K AD E + KLFIGM+ K +E ++ +FS +G I++ +ILRG S+GC
Sbjct: 159 PIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQIEECRILRGPDGLSRGC 218
Query: 146 AFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNA 205
AF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++ RR Q+ +Q N+
Sbjct: 219 AFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNS 278
Query: 206 DSQHPSLFGALPMGYAPPYNGYGYQASGSYGL 237
+ SL G G P Y QA+ S L
Sbjct: 279 ATTWGSLTGL--GGLTPQYLALLQQAASSGNL 308
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 162 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQIEECRILRGPDG-LSRGCAF 220
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 221 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 260
>gi|157108557|ref|XP_001650283.1| hypothetical protein AaeL_AAEL000691 [Aedes aegypti]
gi|108884043|gb|EAT48268.1| AAEL000691-PA [Aedes aegypti]
Length = 201
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 59/83 (71%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+K+FVGQVP+ M E QL MF+EF V ++N+++DKT+ S+GCCFV +R+ A KA +
Sbjct: 107 IKMFVGQVPRSMDEQQLKEMFEEFGRVHQINVLRDKTSGLSKGCCFVTFYTRKAALKAQD 166
Query: 75 ACHNKKTLPGASSPLQVKYADGE 97
A HN KTL G P+Q+K AD E
Sbjct: 167 ALHNIKTLVGMHHPIQMKPADSE 189
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEA 162
K+F+G +P+++ E ++ +F +G + + +LR SKGC F+ + T++ AL A +A
Sbjct: 108 KMFVGQVPRSMDEQQLKEMFEEFGRVHQINVLRDKTSGLSKGCCFVTFYTRKAALKAQDA 167
Query: 163 INGKHKMEGSSVPLVVKWADTE 184
++ + G P+ +K AD+E
Sbjct: 168 LHNIKTLVGMHHPIQMKPADSE 189
>gi|294884853|gb|ADF47437.1| Bruno 5-like protein [Dugesia japonica]
Length = 381
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 68/105 (64%), Gaps = 6/105 (5%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
E KLF+GML KN ++ V +F+ +G I++ +L+ SKGCAF+K+ A AA+
Sbjct: 15 ERKLFVGMLSKNQTDENVQNMFTKFGKIEECTVLKDQNGNSKGCAFVKFLNHTDARAAIN 74
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNAD 206
A++ KMEG+S LVVK+ADT+K++Q R+ Q+ NLP+ +
Sbjct: 75 ALHASQKMEGASSSLVVKFADTDKQKQIRKLQQ------NLPDLN 113
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
E +S+ER KLFVG + K+ T+ + MF +F ++E ++KD+ S+GC FV +
Sbjct: 9 ENIASDER-KLFVGMLSKNQTDENVQNMFTKFGKIEECTVLKDQNGN-SKGCAFVKFLNH 66
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+A A+NA H + + GASS L VK+AD + ++ KL
Sbjct: 67 TDARAAINALHASQKMEGASSSLVVKFADTDKQKQIRKL 105
>gi|290986619|ref|XP_002676021.1| hypothetical protein NAEGRDRAFT_4931 [Naegleria gruberi]
gi|284089621|gb|EFC43277.1| hypothetical protein NAEGRDRAFT_4931 [Naegleria gruberi]
Length = 141
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 76/141 (53%), Gaps = 16/141 (11%)
Query: 28 EAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASS 87
E L +F +F V E+ +I+D+ T SRGC FV S+Q+AD + + + LP
Sbjct: 1 EDNLYPLFSQFGPVAEIVVIRDRFTFKSRGCAFVSFRSKQDADTCIRELNQRLKLP---- 56
Query: 88 PLQVKYADGELERL------------EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQIL 135
P+ + A L L E+KLFI +PKNV+E E+S LF +G I D+ +L
Sbjct: 57 PVNLTIASNFLSCLNIDKYEIGVPHPENKLFIRNIPKNVTEDELSTLFESFGEILDVVVL 116
Query: 136 RGSQQTSKGCAFLKYETKEQA 156
R + TSKGC F+K+ E A
Sbjct: 117 RTTIHTSKGCGFIKFTNSESA 137
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
KLF+ +PK++TE +L +F+ F + +V +++ T S+GC F+ + + AD +
Sbjct: 85 KLFIRNIPKNVTEDELSTLFESFGEILDVVVLR-TTIHTSKGCGFIKFTNSESADMVI 141
>gi|358414907|ref|XP_003582947.1| PREDICTED: CUGBP Elav-like family member 2-like [Bos taurus]
Length = 398
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Query: 88 PLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAF 147
P+Q+K AD E + KLFIGM+ K +E ++ +FS +G I++ +ILRG S+GCAF
Sbjct: 4 PIQMKPADSEKSN-DRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAF 62
Query: 148 LKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 63 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 103
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
+ + S +R KLF+G V K E + MF F ++E I++ SRGC FV +R
Sbjct: 11 DSEKSNDR-KLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGL-SRGCAFVTFSTR 68
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 69 AMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 102
>gi|158288347|ref|XP_310221.4| AGAP009477-PA [Anopheles gambiae str. PEST]
gi|157019207|gb|EAA05917.4| AGAP009477-PA [Anopheles gambiae str. PEST]
Length = 373
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 66/97 (68%), Gaps = 2/97 (2%)
Query: 103 HKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEA 162
KLF+GML K +E +V LFS +GTI++ +LR SKGCAF+ + TK+ A+ A++
Sbjct: 1 RKLFVGMLSKKYNENDVRQLFSGHGTIEECTVLRDPSGQSKGCAFVTFATKQAAIGAIKV 60
Query: 163 --INGKHKMEGSSVPLVVKWADTEKERQARRAQKAQS 197
++ MEG S PLVVK+ADT+KE+ A+R Q+ Q+
Sbjct: 61 SQLHQSKTMEGCSAPLVVKFADTQKEKDAKRMQQMQT 97
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA--V 73
KLFVG + K E + +F ++E +++D + + S+GC FV ++Q A A V
Sbjct: 2 KLFVGMLSKKYNENDVRQLFSGHGTIEECTVLRDPSGQ-SKGCAFVTFATKQAAIGAIKV 60
Query: 74 NACHNKKTLPGASSPLQVKYADGELER 100
+ H KT+ G S+PL VK+AD + E+
Sbjct: 61 SQLHQSKTMEGCSAPLVVKFADTQKEK 87
>gi|358333422|dbj|GAA51938.1| CUG-BP- and ETR3-like factor [Clonorchis sinensis]
Length = 849
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 61/85 (71%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K +E E+ LF+ YG+I++ +LR SKGCAF+K+ + +AL+A+E
Sbjct: 107 DRKLFVGMLGKQQTEDELRTLFAPYGSIEECTVLRDQNGASKGCAFVKFTSNSEALSAIE 166
Query: 162 AINGKHKMEGSSVPLVVKWADTEKE 186
++ M+G+S PLVVK+ADT++E
Sbjct: 167 GLHNSQTMQGASSPLVVKFADTDRE 191
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
E+R KLFVG + K TE +L +F + ++E +++D+ AS+GC FV S EA
Sbjct: 106 EDR-KLFVGMLGKQQTEDELRTLFAPYGSIEECTVLRDQN-GASKGCAFVKFTSNSEALS 163
Query: 72 AVNACHNKKTLPGASSPLQVKYADGELE 99
A+ HN +T+ GASSPL VK+AD + E
Sbjct: 164 AIEGLHNSQTMQGASSPLVVKFADTDRE 191
>gi|194380550|dbj|BAG58428.1| unnamed protein product [Homo sapiens]
Length = 403
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 69/103 (66%), Gaps = 2/103 (1%)
Query: 88 PLQVKYADGELERL--EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGC 145
P+Q+K AD E + KLFIGM+ K +E ++ +FS +G I++ +ILRG S+GC
Sbjct: 4 PIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGC 63
Query: 146 AFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
AF+ + T+ A A++A++ MEG S P+VVK+ADT+K+++
Sbjct: 64 AFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKE 106
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 1 MAESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCF 60
M + EK ++ E KLF+G V K E + MF F ++E I++ SRGC F
Sbjct: 7 MKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGL-SRGCAF 65
Query: 61 VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
V +R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 66 VTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 105
>gi|340502339|gb|EGR29040.1| RNA binding protein, putative [Ichthyophthirius multifiliis]
Length = 316
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 83/139 (59%), Gaps = 8/139 (5%)
Query: 68 EADKAVNACHNKKTLPGASSPLQVKYADGELERL------EHKLFIGMLPKNVSEAEVSA 121
+A++A+ NK +LPG + +++K+AD E ERL +HKLF+G LPK +E +
Sbjct: 3 DAERAIADLKNK-SLPGMKNNIEIKWADNEEERLGVNQDSDHKLFVGSLPKTCTEQNIRD 61
Query: 122 LFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
+F +G I++L +++ SQ ++ AFLKY+ KE+A A+ +N + + S P+ V++A
Sbjct: 62 IFETFGEIEELHLMKDSQNNTRQ-AFLKYKLKEKAHLAIRNLNSQVYIGNSENPIEVRFA 120
Query: 182 DTEKERQARRAQKAQSQAN 200
E + ++ Q QAN
Sbjct: 121 KKYVESEHQKVQHKTEQAN 139
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 53/93 (56%), Gaps = 6/93 (6%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG +PK TE + +F+ F ++E++++KD + F+ +++A A+
Sbjct: 44 KLFVGSLPKTCTEQNIRDIFETFGEIEELHLMKDSQNNTRQ--AFLKYKLKEKAHLAIRN 101
Query: 76 CHNKKTLPGASSPLQV----KYADGELERLEHK 104
+++ + + +P++V KY + E ++++HK
Sbjct: 102 LNSQVYIGNSENPIEVRFAKKYVESEHQKVQHK 134
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 34/61 (55%)
Query: 105 LFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAIN 164
LFI LP + ++++ +FS +G + ++ TSKG F+ Y + ++A A+ +N
Sbjct: 226 LFIFHLPTDFRDSDLERMFSQFGEVISARVNTRPDGTSKGFGFISYNSAKEAEDAIRNLN 285
Query: 165 G 165
G
Sbjct: 286 G 286
>gi|403276014|ref|XP_003929712.1| PREDICTED: CUGBP Elav-like family member 6 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 368
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 71/124 (57%), Gaps = 9/124 (7%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA++
Sbjct: 20 DRKLFVGMLGKQQDEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQ 79
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSLFGALPMGYA 221
++G M G+S LVVK ADT++ER RR Q+ Q HP+ LP+G
Sbjct: 80 GLHGSRTMAGASSSLVVKLADTDRERALRRMQQMAGQLGAF------HPA---PLPLGAC 130
Query: 222 PPYN 225
Y
Sbjct: 131 SAYT 134
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E KLFVG + K E + +F+ F ++E +++ S+GC FV S+ EA A
Sbjct: 19 EDRKLFVGMLGKQQDEEDVRRLFQPFGHIEECTVLRSPDG-TSKGCAFVKFGSQGEAQAA 77
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+ H +T+ GASS L VK AD + ER ++
Sbjct: 78 IQGLHGSRTMAGASSSLVVKLADTDRERALRRM 110
>gi|307193708|gb|EFN76391.1| CUG-BP- and ETR-3-like factor 1 [Harpegnathos saltator]
Length = 385
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 63/94 (67%)
Query: 109 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 168
ML K +E +V +FS+YG I++ +LR S SK CAF+ + +K+ A+ A++A++
Sbjct: 1 MLSKKFTENDVRNMFSVYGMIEECSVLRDSTGKSKACAFVTFASKQYAINAIKALHHSQT 60
Query: 169 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
MEG S PLVVK+ADT+KE+ +R Q+ QS N+
Sbjct: 61 MEGCSSPLVVKFADTQKEKDQKRMQQLQSNLWNI 94
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 22 VPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKT 81
+ K TE + MF + +++E ++++D T + S+ C FV S+Q A A+ A H+ +T
Sbjct: 2 LSKKFTENDVRNMFSVYGMIEECSVLRDSTGK-SKACAFVTFASKQYAINAIKALHHSQT 60
Query: 82 LPGASSPLQVKYADGELERLEHKL 105
+ G SSPL VK+AD + E+ + ++
Sbjct: 61 MEGCSSPLVVKFADTQKEKDQKRM 84
>gi|19909960|dbj|BAB87831.1| bruno-like RNA-binding protein [Mus musculus]
Length = 326
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 62/90 (68%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLFIGM+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++
Sbjct: 12 DRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRTMAQTAIK 71
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARR 191
A++ MEG S P+VVK+ADT+K+ + +R
Sbjct: 72 AMHQAQTMEGCSSPMVVKFADTQKDEEQKR 101
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+ EK ++ E KLF+G + K TE + MF F ++E I++ SRGC FV
Sbjct: 2 ADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPD-GLSRGCAFVTF 60
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+R A A+ A H +T+ G SSP+ VK+AD + + + ++
Sbjct: 61 TTRTMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDEEQKRM 102
>gi|224775835|gb|ACN62426.1| MIP02642p [Drosophila melanogaster]
Length = 237
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 59/83 (71%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
E KLF+GML K +EA+V LF+ +GTI++ +LR SKGCAF+ + TK+ A+ A++
Sbjct: 139 ERKLFVGMLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQNAIGAIK 198
Query: 162 AINGKHKMEGSSVPLVVKWADTE 184
A++ MEG S PLVVK+ADT+
Sbjct: 199 ALHQSQTMEGCSAPLVVKFADTQ 221
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K TEA + +F ++E +++D+ + S+GC FV ++Q A A+ A
Sbjct: 141 KLFVGMLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQ-SKGCAFVTFATKQNAIGAIKA 199
Query: 76 CHNKKTLPGASSPLQVKYADGE 97
H +T+ G S+PL VK+AD +
Sbjct: 200 LHQSQTMEGCSAPLVVKFADTQ 221
>gi|328703007|ref|XP_003242066.1| PREDICTED: CUGBP Elav-like family member 2-like [Acyrthosiphon
pisum]
Length = 188
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 58/85 (68%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+P+ M E L+ MF EF V ++N+++DK + S+GCCFV +R+ A A
Sbjct: 86 DYIKMFVGQIPRAMNEQDLMDMFGEFGRVYQLNLLRDKFSGVSKGCCFVTYYTRKAALDA 145
Query: 73 VNACHNKKTLPGASSPLQVKYADGE 97
NA HN KTLPG P+Q+K AD E
Sbjct: 146 QNALHNIKTLPGMHHPIQMKPADSE 170
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Query: 95 DGELERLEH-KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYET 152
DGE ++ K+F+G +P+ ++E ++ +F +G + L +LR SKGC F+ Y T
Sbjct: 79 DGEQPETDYIKMFVGQIPRAMNEQDLMDMFGEFGRVYQLNLLRDKFSGVSKGCCFVTYYT 138
Query: 153 KEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
++ AL A A++ + G P+ +K AD+E
Sbjct: 139 RKAALDAQNALHNIKTLPGMHHPIQMKPADSE 170
>gi|159164252|pdb|2DNK|A Chain A, Solution Structure Of Rna Binding Domain In Bruno-Like 4
Rna Binding Protein
Length = 105
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAI 163
KLF+GML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A+
Sbjct: 17 KLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINAL 76
Query: 164 NGKHKMEGSSVPLVVKWADTEKE 186
+G M G+S LVVK+ADT+KE
Sbjct: 77 HGSQTMPGASSSLVVKFADTDKE 99
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E + +F+ F ++E I++ S+GC FV S EA A+NA
Sbjct: 17 KLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGN-SKGCAFVKYSSHAEAQAAINA 75
Query: 76 CHNKKTLPGASSPLQVKYADGELE 99
H +T+PGASS L VK+AD + E
Sbjct: 76 LHGSQTMPGASSSLVVKFADTDKE 99
>gi|410049377|ref|XP_003952740.1| PREDICTED: CUGBP Elav-like family member 6 isoform 2 [Pan
troglodytes]
Length = 369
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 62/93 (66%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA++
Sbjct: 20 DRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQ 79
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
++G M G+S LVVK ADT++ER RR Q+
Sbjct: 80 GLHGSRTMAGASSSLVVKLADTDRERALRRMQQ 112
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E KLFVG + K E + +F+ F ++E +++ S+GC FV S+ EA A
Sbjct: 19 EDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDG-TSKGCAFVKFGSQGEAQAA 77
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+ H +T+ GASS L VK AD + ER ++
Sbjct: 78 IQGLHGSRTMAGASSSLVVKLADTDRERALRRM 110
>gi|194911931|ref|XP_001982402.1| GG12756 [Drosophila erecta]
gi|190648078|gb|EDV45371.1| GG12756 [Drosophila erecta]
Length = 466
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 101/177 (57%), Gaps = 7/177 (3%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
SSE R L V +P+ MTE ++ ++F ++ V +I+DK+ S G FV Q+A
Sbjct: 140 SSETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQGQSLGYGFVNYVRPQDA 199
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGT 128
++AVN + + + ++V +A + ++ L++ LPK +++ E+ A+F+ +G
Sbjct: 200 EQAVNVLNGLRL---QNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGA 256
Query: 129 IKDLQILR--GSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADT 183
I +IL+ G+ +KG F++++ +E+A A+ A+NG + P+VVK+++T
Sbjct: 257 IITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNGTTPSSCTD-PIVVKFSNT 312
>gi|119621801|gb|EAX01396.1| bruno-like 4, RNA binding protein (Drosophila), isoform CRA_c [Homo
sapiens]
Length = 328
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 109 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 168
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 1 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 60
Query: 169 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 61 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 90
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 24 KHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLP 83
K +E + +F+ F ++E I++ S+GC FV S EA A+NA H +T+P
Sbjct: 4 KQQSEDDVRRLFEAFGNIEECTILRGPDGN-SKGCAFVKYSSHAEAQAAINALHGSQTMP 62
Query: 84 GASSPLQVKYADGELERLEHKL 105
GASS L VK+AD + ER ++
Sbjct: 63 GASSSLVVKFADTDKERTMRRM 84
>gi|34526541|dbj|BAC85148.1| FLJ00324 protein [Homo sapiens]
Length = 376
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 61/93 (65%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA+
Sbjct: 28 DRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIR 87
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
++G M G+S LVVK ADT++ER RR Q+
Sbjct: 88 GLHGSRTMAGASSSLVVKLADTDRERALRRMQQ 120
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E KLFVG + K E + +F+ F ++E +++ S+GC FV S+ EA A
Sbjct: 27 EDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDG-TSKGCAFVKFGSQGEAQAA 85
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+ H +T+ GASS L VK AD + ER ++
Sbjct: 86 IRGLHGSRTMAGASSSLVVKLADTDRERALRRM 118
>gi|34194499|gb|AAH33838.1| BRUNOL6 protein [Homo sapiens]
Length = 368
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 61/93 (65%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K E +V LF +G I++ +LR TSKGCAF+K+ ++ +A AA+
Sbjct: 20 DRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIR 79
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
++G M G+S LVVK ADT++ER RR Q+
Sbjct: 80 GLHGSRTMAGASSSLVVKLADTDRERALRRMQQ 112
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
E KLFVG + K E + +F+ F ++E +++ S+GC FV S+ EA A
Sbjct: 19 EDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDG-TSKGCAFVKFGSQGEAQAA 77
Query: 73 VNACHNKKTLPGASSPLQVKYADGELERLEHKL 105
+ H +T+ GASS L VK AD + ER ++
Sbjct: 78 IRGLHGSRTMAGASSSLVVKLADTDRERALRRM 110
>gi|221307768|gb|ACM16743.1| MIP02242p [Drosophila melanogaster]
Length = 350
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 75/122 (61%), Gaps = 4/122 (3%)
Query: 109 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 168
ML K +EA+V LF+ +GTI++ +LR SKGCAF+ + TK+ A+ A++A++
Sbjct: 1 MLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQT 60
Query: 169 MEGSSVPLVVKWADTEKERQARRAQKAQSQAN-NLPN---ADSQHPSLFGALPMGYAPPY 224
MEG S PLVVK+ADT+KE+ ++ Q+ + N P+ A + P++ A + APP
Sbjct: 61 MEGCSAPLVVKFADTQKEKDQKKMQQIHAFCGINTPSGATAGAATPTINAATALIAAPPS 120
Query: 225 NG 226
G
Sbjct: 121 AG 122
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 24 KHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLP 83
K TEA + +F ++E +++D+ + S+GC FV ++Q A A+ A H +T+
Sbjct: 4 KKYTEADVRQLFTGHGTIEECTVLRDQAGQ-SKGCAFVTFATKQNAIGAIKALHQSQTME 62
Query: 84 GASSPLQVKYADGELERLEHKL 105
G S+PL VK+AD + E+ + K+
Sbjct: 63 GCSAPLVVKFADTQKEKDQKKM 84
>gi|386769533|ref|NP_001246001.1| bruno-2, isoform I [Drosophila melanogaster]
gi|383291459|gb|AFH03675.1| bruno-2, isoform I [Drosophila melanogaster]
Length = 350
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 75/122 (61%), Gaps = 4/122 (3%)
Query: 109 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 168
ML K +EA+V LF+ +GTI++ +LR SKGCAF+ + TK+ A+ A++A++
Sbjct: 1 MLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQT 60
Query: 169 MEGSSVPLVVKWADTEKERQARRAQKAQSQAN-NLPN---ADSQHPSLFGALPMGYAPPY 224
MEG S PLVVK+ADT+KE+ ++ Q+ + N P+ A + P++ A + APP
Sbjct: 61 MEGCSAPLVVKFADTQKEKDQKKMQQIHAFCGINTPSGATAGAATPTINAATALIAAPPS 120
Query: 225 NG 226
G
Sbjct: 121 AG 122
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 24 KHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLP 83
K TEA + +F ++E +++D+ + S+GC FV ++Q A A+ A H +T+
Sbjct: 4 KKYTEADVRQLFTGHGTIEECTVLRDQAGQ-SKGCAFVTFATKQNAIGAIKALHQSQTME 62
Query: 84 GASSPLQVKYADGELERLEHKL 105
G S+PL VK+AD + E+ + K+
Sbjct: 63 GCSAPLVVKFADTQKEKDQKKM 84
>gi|157823331|ref|NP_001100870.1| CUGBP Elav-like family member 4 [Rattus norvegicus]
gi|149017097|gb|EDL76148.1| bruno-like 4, RNA binding protein (Drosophila) (predicted), isoform
CRA_a [Rattus norvegicus]
Length = 329
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 109 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 168
ML K SE +V LF +G I++ ILRG SKGCAF+KY + +A AA+ A++G
Sbjct: 1 MLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQT 60
Query: 169 MEGSSVPLVVKWADTEKERQARRAQKAQSQ 198
M G+S LVVK+ADT+KER RR Q+ Q
Sbjct: 61 MPGASSSLVVKFADTDKERTMRRMQQMAGQ 90
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 24 KHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLP 83
K +E + +F+ F ++E I++ S+GC FV S EA A+NA H +T+P
Sbjct: 4 KQQSEDDVRRLFEAFGNIEECTILRGPDGN-SKGCAFVKYSSHAEAQAAINALHGSQTMP 62
Query: 84 GASSPLQVKYADGELERLEHKL 105
GASS L VK+AD + ER ++
Sbjct: 63 GASSSLVVKFADTDKERTMRRM 84
>gi|195578727|ref|XP_002079215.1| GD23833 [Drosophila simulans]
gi|194191224|gb|EDX04800.1| GD23833 [Drosophila simulans]
Length = 245
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 75/122 (61%), Gaps = 4/122 (3%)
Query: 109 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 168
ML K +EA+V LF+ +GTI++ +LR SKGCAF+ + TK+ A+ A++A++
Sbjct: 1 MLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQT 60
Query: 169 MEGSSVPLVVKWADTEKERQARRAQKAQSQAN-NLPN---ADSQHPSLFGALPMGYAPPY 224
MEG S PLVVK+ADT+KE+ ++ Q+ + N P+ A + P++ A + APP
Sbjct: 61 MEGCSAPLVVKFADTQKEKDQKKMQQIHAFCGINTPSGATAGAATPTINAATALIAAPPS 120
Query: 225 NG 226
G
Sbjct: 121 AG 122
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 24 KHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLP 83
K TEA + +F ++E +++D+ + S+GC FV ++Q A A+ A H +T+
Sbjct: 4 KKYTEADVRQLFTGHGTIEECTVLRDQAGQ-SKGCAFVTFATKQNAIGAIKALHQSQTME 62
Query: 84 GASSPLQVKYADGELERLEHKL 105
G S+PL VK+AD + E+ + K+
Sbjct: 63 GCSAPLVVKFADTQKEKDQKKM 84
>gi|195472353|ref|XP_002088465.1| GE18583 [Drosophila yakuba]
gi|194174566|gb|EDW88177.1| GE18583 [Drosophila yakuba]
Length = 430
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 57/85 (67%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+PK E +L MF++F V +N+++DK T SRGCCFV +R+ A +A
Sbjct: 309 DNIKMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYTRKAALRA 368
Query: 73 VNACHNKKTLPGASSPLQVKYADGE 97
+A HN KTL G P+Q+K AD E
Sbjct: 369 QDALHNIKTLDGMHHPIQMKPADSE 393
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEA 162
K+F+G +PK E + +F +G + L +LR S+GC F+ Y T++ AL A +A
Sbjct: 312 KMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYTRKAALRAQDA 371
Query: 163 INGKHKMEGSSVPLVVKWADTEKE 186
++ ++G P+ +K AD+E
Sbjct: 372 LHNIKTLDGMHHPIQMKPADSENR 395
>gi|359479959|ref|XP_002271329.2| PREDICTED: flowering time control protein FCA-like [Vitis vinifera]
Length = 402
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 61/87 (70%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKL+VG VP+ +TE + ++F+E + EV ++KDK T + CCFV + EAD+A+
Sbjct: 13 VKLYVGCVPRTVTEEDIRSLFEEHGKIVEVVLLKDKRTGQQQECCFVKYATMDEADRAIK 72
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL 101
A +N++TLPG + ++V+YADGE ERL
Sbjct: 73 ALNNQRTLPGGVAAIKVRYADGERERL 99
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 57/87 (65%)
Query: 101 LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAAL 160
E KL++G L K S+ E+ +FS YG ++D+ I+R + S+GC F+K ++ A+AA+
Sbjct: 158 FEDKLYVGYLNKQASKREIEEIFSPYGIVEDIFIVRDDMKQSRGCGFVKLSNRDMAVAAI 217
Query: 161 EAINGKHKMEGSSVPLVVKWADTEKER 187
A+NG + M G PL+V++AD +K R
Sbjct: 218 NALNGNYVMRGCDQPLIVRFADPKKPR 244
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 56/90 (62%), Gaps = 7/90 (7%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR----GSQQTSKGCAFLKYETKEQALAA 159
KL++G +P+ V+E ++ +LF +G I ++ +L+ G QQ C F+KY T ++A A
Sbjct: 14 KLYVGCVPRTVTEEDIRSLFEEHGKIVEVVLLKDKRTGQQQE---CCFVKYATMDEADRA 70
Query: 160 LEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++A+N + + G + V++AD E+ER A
Sbjct: 71 IKALNNQRTLPGGVAAIKVRYADGERERLA 100
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KL+VG + K ++ ++ +F + +V+++ I++D + SRGC FV +R A A+NA
Sbjct: 161 KLYVGYLNKQASKREIEEIFSPYGIVEDIFIVRDDM-KQSRGCGFVKLSNRDMAVAAINA 219
Query: 76 CHNKKTLPGASSPLQVKYADGELERL 101
+ + G PL V++AD + R+
Sbjct: 220 LNGNYVMRGCDQPLIVRFADPKKPRI 245
>gi|194761398|ref|XP_001962916.1| GF14193 [Drosophila ananassae]
gi|190616613|gb|EDV32137.1| GF14193 [Drosophila ananassae]
Length = 519
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 57/85 (67%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+PK E +L MF++F V +N+++DK T SRGCCFV +R+ A +A
Sbjct: 418 DNIKMFVGQIPKTWDETRLRHMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYTRKAALRA 477
Query: 73 VNACHNKKTLPGASSPLQVKYADGE 97
+A HN KTL G P+Q+K AD E
Sbjct: 478 QDALHNIKTLDGMHHPIQMKPADSE 502
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 64/118 (54%), Gaps = 4/118 (3%)
Query: 68 EADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYG 127
EA+KA + + L G+SSP +K + + K+F+G +PK E + +F +G
Sbjct: 388 EANKAYISIKTELELVGSSSPESIK---DQPDADNIKMFVGQIPKTWDETRLRHMFEQFG 444
Query: 128 TIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
+ L +LR S+GC F+ Y T++ AL A +A++ ++G P+ +K AD+E
Sbjct: 445 PVHTLNVLRDKVTSISRGCCFVTYYTRKAALRAQDALHNIKTLDGMHHPIQMKPADSE 502
>gi|297744002|emb|CBI36972.3| unnamed protein product [Vitis vinifera]
Length = 672
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 61/87 (70%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
VKL+VG VP+ +TE + ++F+E + EV ++KDK T + CCFV + EAD+A+
Sbjct: 91 VKLYVGCVPRTVTEEDIRSLFEEHGKIVEVVLLKDKRTGQQQECCFVKYATMDEADRAIK 150
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL 101
A +N++TLPG + ++V+YADGE ERL
Sbjct: 151 ALNNQRTLPGGVAAIKVRYADGERERL 177
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 57/87 (65%)
Query: 101 LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAAL 160
E KL++G L K S+ E+ +FS YG ++D+ I+R + S+GC F+K ++ A+AA+
Sbjct: 240 FEDKLYVGYLNKQASKREIEEIFSPYGIVEDIFIVRDDMKQSRGCGFVKLSNRDMAVAAI 299
Query: 161 EAINGKHKMEGSSVPLVVKWADTEKER 187
A+NG + M G PL+V++AD +K R
Sbjct: 300 NALNGNYVMRGCDQPLIVRFADPKKPR 326
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 56/90 (62%), Gaps = 7/90 (7%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILR----GSQQTSKGCAFLKYETKEQALAA 159
KL++G +P+ V+E ++ +LF +G I ++ +L+ G QQ C F+KY T ++A A
Sbjct: 92 KLYVGCVPRTVTEEDIRSLFEEHGKIVEVVLLKDKRTGQQQE---CCFVKYATMDEADRA 148
Query: 160 LEAINGKHKMEGSSVPLVVKWADTEKERQA 189
++A+N + + G + V++AD E+ER A
Sbjct: 149 IKALNNQRTLPGGVAAIKVRYADGERERLA 178
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KL+VG + K ++ ++ +F + +V+++ I++D + SRGC FV +R A A+NA
Sbjct: 243 KLYVGYLNKQASKREIEEIFSPYGIVEDIFIVRDDM-KQSRGCGFVKLSNRDMAVAAINA 301
Query: 76 CHNKKTLPGASSPLQVKYADGELERL 101
+ + G PL V++AD + R+
Sbjct: 302 LNGNYVMRGCDQPLIVRFADPKKPRI 327
>gi|307170912|gb|EFN63015.1| CUG-BP- and ETR-3-like factor 1 [Camponotus floridanus]
Length = 395
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 62/94 (65%)
Query: 109 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 168
ML K +E +V +FS YG I++ +LR S SK CAF+ + +K+ A+ A++A++
Sbjct: 1 MLSKKFTENDVRNMFSAYGMIEECSVLRDSTGKSKACAFVTFASKQYAINAIKALHHSQT 60
Query: 169 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
MEG S PLVVK+ADT+KE+ +R Q+ QS N+
Sbjct: 61 MEGCSSPLVVKFADTQKEKDQKRMQQLQSNLWNI 94
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 22 VPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKT 81
+ K TE + MF + +++E ++++D T + S+ C FV S+Q A A+ A H+ +T
Sbjct: 2 LSKKFTENDVRNMFSAYGMIEECSVLRDSTGK-SKACAFVTFASKQYAINAIKALHHSQT 60
Query: 82 LPGASSPLQVKYADGELERLEHKL 105
+ G SSPL VK+AD + E+ + ++
Sbjct: 61 MEGCSSPLVVKFADTQKEKDQKRM 84
>gi|294932797|ref|XP_002780446.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239890380|gb|EER12241.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 612
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 97/185 (52%), Gaps = 7/185 (3%)
Query: 8 KKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQ 67
+ E KLFVG +P TE L +F +F + E+ I +D+ R S+GC ++ +R+
Sbjct: 127 RSDDEGPYKLFVGCLPFDTTEHDLFPLFAQFGEIVELAIQRDREGR-SKGCAWLKYLTRE 185
Query: 68 EADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN---VSEAEVSALFS 124
D + H + + + +QVKYA GELE+ E+++++ LP++ ++E E+
Sbjct: 186 SCDDCIARLHGQFYVGHVRAAMQVKYATGELEKRENRVYLIGLPRDETVMAEHELLTALD 245
Query: 125 IYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGK--HKMEGSSVPLVVKWAD 182
YG I++ + R ++ C F+K+ +E A A ++A + + H + +P V +
Sbjct: 246 AYGEIREFVLFRQGGRSVGAC-FVKFTAREPAAALVQACHLRQFHVNDNIHLPAVRAYFA 304
Query: 183 TEKER 187
T+ R
Sbjct: 305 TQIRR 309
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 52/90 (57%)
Query: 103 HKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEA 162
+KLF+G LP + +E ++ LF+ +G I +L I R + SKGCA+LKY T+E +
Sbjct: 134 YKLFVGCLPFDTTEHDLFPLFAQFGEIVELAIQRDREGRSKGCAWLKYLTRESCDDCIAR 193
Query: 163 INGKHKMEGSSVPLVVKWADTEKERQARRA 192
++G+ + + VK+A E E++ R
Sbjct: 194 LHGQFYVGHVRAAMQVKYATGELEKRENRV 223
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAI 163
KLF+G LP + + +++ LF +G I ++ +L S+ SKG AF+ + A AA+
Sbjct: 411 KLFVGCLPYSKTTLDLAQLFGQFGPILEVALLTNSEGKSKGAAFVTFAYAPDAEAAMSM- 469
Query: 164 NGKHKMEGSSVPLVVKWA 181
++ GSS + V +A
Sbjct: 470 -NEYCFPGSSRSINVSYA 486
>gi|195347400|ref|XP_002040241.1| GM19036 [Drosophila sechellia]
gi|195564435|ref|XP_002105824.1| GD16475 [Drosophila simulans]
gi|194121669|gb|EDW43712.1| GM19036 [Drosophila sechellia]
gi|194203185|gb|EDX16761.1| GD16475 [Drosophila simulans]
Length = 466
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 101/177 (57%), Gaps = 7/177 (3%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
S+E R L V +P+ MTE ++ ++F ++ V +I+DK+ S G FV Q+A
Sbjct: 140 STETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQGQSLGYGFVNYVRPQDA 199
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGT 128
++AVN + + + ++V +A + ++ L++ LPK +++ E+ A+F+ +G
Sbjct: 200 EQAVNVLNGLRL---QNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGA 256
Query: 129 IKDLQILR--GSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADT 183
I +IL+ G+ +KG F++++ +E+A A+ A+NG + P+VVK+++T
Sbjct: 257 IITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNGTTPSSCTD-PIVVKFSNT 312
>gi|332021723|gb|EGI62079.1| CUG-BP- and ETR-3-like factor 2 [Acromyrmex echinatior]
Length = 405
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 62/94 (65%)
Query: 109 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 168
ML K +E +V +FS YG I++ +LR S SK CAF+ + +K+ A+ A++A++
Sbjct: 1 MLSKKFTENDVRNMFSAYGMIEECSVLRDSTGKSKACAFVTFASKQYAINAIKALHHSQT 60
Query: 169 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
MEG S PLVVK+ADT+KE+ +R Q+ QS N+
Sbjct: 61 MEGCSSPLVVKFADTQKEKDQKRMQQLQSNLWNI 94
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 22 VPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKT 81
+ K TE + MF + +++E ++++D T + S+ C FV S+Q A A+ A H+ +T
Sbjct: 2 LSKKFTENDVRNMFSAYGMIEECSVLRDSTGK-SKACAFVTFASKQYAINAIKALHHSQT 60
Query: 82 LPGASSPLQVKYADGELERLEHKL 105
+ G SSPL VK+AD + E+ + ++
Sbjct: 61 MEGCSSPLVVKFADTQKEKDQKRM 84
>gi|19909956|dbj|BAB87829.1| bruno-like RNA binding protein [Gallus gallus]
Length = 328
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 62/90 (68%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLFIGM+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++
Sbjct: 12 DRKLFIGMISKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIK 71
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARR 191
A++ MEG S P+VVK+ADT K+++ +R
Sbjct: 72 AMHQAQTMEGCSSPIVVKFADTPKDKEQKR 101
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+ EK ++ E KLF+G + K E + MF F ++E I++ SRGC FV
Sbjct: 2 ADSEKNNAVEDRKLFIGMISKKCNENDIRVMFSPFGQIEECRILRGPDGL-SRGCAFVTF 60
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYAD 95
+R A A+ A H +T+ G SSP+ VK+AD
Sbjct: 61 TTRAMAQTAIKAMHQAQTMEGCSSPIVVKFAD 92
>gi|195472359|ref|XP_002088468.1| GE18585 [Drosophila yakuba]
gi|194174569|gb|EDW88180.1| GE18585 [Drosophila yakuba]
Length = 508
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 75/122 (61%), Gaps = 4/122 (3%)
Query: 109 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 168
ML K +EA+V LF+ +GTI++ +LR SKGCAF+ + TK+ A+ A++A++
Sbjct: 1 MLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQT 60
Query: 169 MEGSSVPLVVKWADTEKERQARRAQKAQSQAN-NLPN---ADSQHPSLFGALPMGYAPPY 224
M+G S PLVVK+ADT+KE+ ++ Q+ + N P+ A + P++ A + APP
Sbjct: 61 MDGCSAPLVVKFADTQKEKDQKKMQQIHAFCGINTPSGATAGAATPTINAATALIAAPPS 120
Query: 225 NG 226
G
Sbjct: 121 AG 122
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 24 KHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLP 83
K TEA + +F ++E +++D+ + S+GC FV ++Q A A+ A H +T+
Sbjct: 4 KKYTEADVRQLFTGHGTIEECTVLRDQAGQ-SKGCAFVTFATKQNAIGAIKALHQSQTMD 62
Query: 84 GASSPLQVKYADGELERLEHKL 105
G S+PL VK+AD + E+ + K+
Sbjct: 63 GCSAPLVVKFADTQKEKDQKKM 84
>gi|303286617|ref|XP_003062598.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456115|gb|EEH53417.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 380
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 103/201 (51%), Gaps = 15/201 (7%)
Query: 12 EERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADK 71
++ ++V + + + E L ++F F +V+ +I+D +T SRG FV Q A+
Sbjct: 114 QQHSNVYVKNLAEDVDELTLKSVFDAFGVVESCCVIRDVSTNTSRGFGFVKFDGVQSAES 173
Query: 72 AVNACHNKKTLPGASSPLQVKYADGE---------LERLEHKLFIGMLPKNVSEAEVSAL 122
A+ H K L+VK+A+ + + +++ LP +E E+ A
Sbjct: 174 AIKEMHGKSVR---GRTLEVKFANSDSSATTAAAGIGTPSDNIYVKGLPPRWTEVELRAF 230
Query: 123 FSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
F ++G I + ++L S T+ G A +++ + EQA +A+ NG+ G +VPLV+++AD
Sbjct: 231 FKVFGAIIECRLLHASGTTTAG-ALIRFASAEQAASAVVTANGRVP-AGGAVPLVIRFAD 288
Query: 183 TE-KERQARRAQKAQSQANNL 202
+ K ++ + + S+ N++
Sbjct: 289 SHGKAKRGANSGNSNSRGNSV 309
>gi|440910206|gb|ELR60031.1| ELAV-like protein 1, partial [Bos grunniens mutus]
Length = 330
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 98/171 (57%), Gaps = 8/171 (4%)
Query: 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
R L V +P++MT+ +L ++F V+ +I+DK S G FV + ++A++A+
Sbjct: 4 RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAI 63
Query: 74 NACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
N + L S ++V YA E + + L+I LP+N+++ +V +FS +G I +
Sbjct: 64 NTLNG---LRLQSKTIKVSYARPSSEVIKDANLYISGLPRNMTQKDVEDMFSRFGRIINS 120
Query: 133 QILRGSQQT--SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
++L Q T S+G AF++++ + +A A+ + NG HK GSS P+ VK+A
Sbjct: 121 RVLV-DQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPITVKFA 169
>gi|322798836|gb|EFZ20383.1| hypothetical protein SINV_80350 [Solenopsis invicta]
Length = 385
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 62/94 (65%)
Query: 109 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 168
ML K +E +V +FS YG I++ +LR S SK CAF+ + +K+ A+ A++A++
Sbjct: 1 MLSKKFTENDVRNMFSAYGMIEECSVLRDSTGKSKACAFVTFASKQYAINAIKALHHSQT 60
Query: 169 MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
MEG S PLVVK+ADT+KE+ +R Q+ Q+ N+
Sbjct: 61 MEGCSSPLVVKFADTQKEKDQKRMQQLQTNLWNI 94
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 22 VPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKT 81
+ K TE + MF + +++E ++++D T + S+ C FV S+Q A A+ A H+ +T
Sbjct: 2 LSKKFTENDVRNMFSAYGMIEECSVLRDSTGK-SKACAFVTFASKQYAINAIKALHHSQT 60
Query: 82 LPGASSPLQVKYADGELERLEHKL 105
+ G SSPL VK+AD + E+ + ++
Sbjct: 61 MEGCSSPLVVKFADTQKEKDQKRM 84
>gi|195578723|ref|XP_002079213.1| GD23831 [Drosophila simulans]
gi|194191222|gb|EDX04798.1| GD23831 [Drosophila simulans]
Length = 166
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 57/85 (67%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +K+FVGQ+PK E +L MF++F V +N+++DK T SRGCCFV +R+ A +A
Sbjct: 50 DNIKMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYTRKAALRA 109
Query: 73 VNACHNKKTLPGASSPLQVKYADGE 97
+A HN KTL G P+Q+K AD E
Sbjct: 110 QDALHNIKTLDGMHHPIQMKPADSE 134
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEA 162
K+F+G +PK E + +F +G + L +LR S+GC F+ Y T++ AL A +A
Sbjct: 53 KMFVGQIPKTWDETRLRQMFEQFGPVHTLNVLRDKVTSISRGCCFVTYYTRKAALRAQDA 112
Query: 163 INGKHKMEGSSVPLVVKWADTE 184
++ ++G P+ +K AD+E
Sbjct: 113 LHNIKTLDGMHHPIQMKPADSE 134
>gi|115497832|ref|NP_001069922.1| ELAV-like protein 1 [Bos taurus]
gi|261244966|ref|NP_001159666.1| ELAV-like protein 1 [Ovis aries]
gi|73587279|gb|AAI02496.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [Bos taurus]
gi|256665397|gb|ACV04844.1| ELAV-like protein 1 [Ovis aries]
gi|296485836|tpg|DAA27951.1| TPA: ELAV-like 1 (Hu antigen R) [Bos taurus]
Length = 326
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 98/171 (57%), Gaps = 8/171 (4%)
Query: 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
R L V +P++MT+ +L ++F V+ +I+DK S G FV + ++A++A+
Sbjct: 19 RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAI 78
Query: 74 NACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
N + L S ++V YA E + + L+I LP+N+++ +V +FS +G I +
Sbjct: 79 NTLNG---LRLQSKTIKVSYARPSSEVIKDANLYISGLPRNMTQKDVEDMFSRFGRIINS 135
Query: 133 QILRGSQQT--SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
++L Q T S+G AF++++ + +A A+ + NG HK GSS P+ VK+A
Sbjct: 136 RVLV-DQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPITVKFA 184
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 83/201 (41%), Gaps = 53/201 (26%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 76
L++ +P++MT+ + MF F + ++ D+TT SRG F+ R EA++A+ +
Sbjct: 108 LYISGLPRNMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 167
Query: 77 HNKKTLPGASSPLQVKYAD--------GELERLEHK------------------------ 104
+ K PG+S P+ VK+A L +L H
Sbjct: 168 NGHKP-PGSSEPITVKFAANPNQNKNVALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVD 226
Query: 105 -------------------LFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKG 144
+FI L ++ E + +F +G + +++++R + KG
Sbjct: 227 HMSGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKG 286
Query: 145 CAFLKYETKEQALAALEAING 165
F+ E+A A+ ++NG
Sbjct: 287 FGFVTMTNYEEAAMAIASLNG 307
>gi|417409800|gb|JAA51391.1| Putative rna-binding protein elav/hu rrm superfamily, partial
[Desmodus rotundus]
Length = 336
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 98/171 (57%), Gaps = 8/171 (4%)
Query: 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
R L V +P++MT+ +L ++F V+ +I+DK S G FV + ++A++AV
Sbjct: 29 RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAV 88
Query: 74 NACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
N + L S ++V YA E + + L+I LP+N+++ +V +FS +G I +
Sbjct: 89 NTLNG---LRLQSKTIKVSYARPSSEVIKDANLYISGLPRNMTQKDVEDMFSRFGRIINS 145
Query: 133 QILRGSQQT--SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
++L Q T S+G AF++++ + +A A+ + NG HK GSS P+ VK+A
Sbjct: 146 RVLV-DQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPITVKFA 194
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 87/210 (41%), Gaps = 56/210 (26%)
Query: 11 SEERVK---LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQ 67
S E +K L++ +P++MT+ + MF F + ++ D+TT SRG F+ R
Sbjct: 109 SSEVIKDANLYISGLPRNMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRS 168
Query: 68 EADKAVNACHNKKTLPGASSPLQVKYAD--------GELERLEHK--------------- 104
EA++A+ + + K PG+S P+ VK+A L +L H
Sbjct: 169 EAEEAITSFNGHKP-PGSSEPITVKFAANPNQNKNMALLSQLYHSPARRFGGPVHHQAQR 227
Query: 105 ----------------------------LFIGMLPKNVSEAEVSALFSIYGTIKDLQILR 136
+FI L ++ E + +F +G + +++++R
Sbjct: 228 FRFSPMGVDHMSGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIR 287
Query: 137 G-SQQTSKGCAFLKYETKEQALAALEAING 165
+ KG F+ E+A A+ ++NG
Sbjct: 288 DFNTNKCKGFGFVTMTNYEEAAMAIASLNG 317
>gi|300123637|emb|CBK24909.2| unnamed protein product [Blastocystis hominis]
Length = 581
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 79/126 (62%), Gaps = 3/126 (2%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
E+KLFIGM+P+ + E++ +F +G + ++ I++ T+KG F +Y++++ A A++
Sbjct: 53 ENKLFIGMIPEGTTLDELTPMFKQFGKLDEIVIIKNGDATAKGYGFCRYDSRDNAFQAIK 112
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANN-LPNADSQHPS--LFGALPM 218
A+NGK + GS+ LVVK+ADT ++Q R ++ Q++ + P A+ +H + L G P+
Sbjct: 113 ALNGKTYLHGSTTSLVVKFADTPNQKQNRLLRQKQTKGQDESPIANPKHVNLPLLGNDPL 172
Query: 219 GYAPPY 224
Y Y
Sbjct: 173 SYEMEY 178
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLF+G +P+ T +L MFK+F +DE+ IIK+ A +G F SR A +A+ A
Sbjct: 55 KLFIGMIPEGTTLDELTPMFKQFGKLDEIVIIKNGDATA-KGYGFCRYDSRDNAFQAIKA 113
Query: 76 CHNKKTLPGASSPLQVKYAD 95
+ K L G+++ L VK+AD
Sbjct: 114 LNGKTYLHGSTTSLVVKFAD 133
>gi|194761396|ref|XP_001962915.1| GF19660 [Drosophila ananassae]
gi|190616612|gb|EDV32136.1| GF19660 [Drosophila ananassae]
Length = 215
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 60/86 (69%)
Query: 109 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 168
ML K +EA+V LF+ +GTI++ +LR SKGCAF+ + TK+ A+ A++A++
Sbjct: 1 MLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQNAIGAIKALHQSQT 60
Query: 169 MEGSSVPLVVKWADTEKERQARRAQK 194
MEG S PLVVK+ADT+KE+ ++ Q+
Sbjct: 61 MEGCSAPLVVKFADTQKEKDQKKMQQ 86
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 24 KHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLP 83
K TEA + +F ++E +++D+ + S+GC FV ++Q A A+ A H +T+
Sbjct: 4 KKYTEADVRQLFTGHGTIEECTVLRDQAGQ-SKGCAFVTFATKQNAIGAIKALHQSQTME 62
Query: 84 GASSPLQVKYADGELERLEHKL 105
G S+PL VK+AD + E+ + K+
Sbjct: 63 GCSAPLVVKFADTQKEKDQKKM 84
>gi|198474574|ref|XP_002132714.1| GA25731 [Drosophila pseudoobscura pseudoobscura]
gi|198138448|gb|EDY70116.1| GA25731 [Drosophila pseudoobscura pseudoobscura]
Length = 574
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 60/86 (69%)
Query: 109 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 168
ML K +EA+V LF+ +GTI++ +LR SKGCAF+ + TK+ A+ A+++++
Sbjct: 1 MLNKKYTEADVRQLFTGHGTIEECTVLRDQAGQSKGCAFVTFATKQNAIGAIKSLHQSQT 60
Query: 169 MEGSSVPLVVKWADTEKERQARRAQK 194
MEG S PLVVK+ADT+KE+ ++ Q+
Sbjct: 61 MEGCSAPLVVKFADTQKEKDQKKMQQ 86
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 24 KHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLP 83
K TEA + +F ++E +++D+ + S+GC FV ++Q A A+ + H +T+
Sbjct: 4 KKYTEADVRQLFTGHGTIEECTVLRDQAGQ-SKGCAFVTFATKQNAIGAIKSLHQSQTME 62
Query: 84 GASSPLQVKYADGELERLEHKL 105
G S+PL VK+AD + E+ + K+
Sbjct: 63 GCSAPLVVKFADTQKEKDQKKM 84
>gi|356571003|ref|XP_003553671.1| PREDICTED: flowering time control protein FCA-like [Glycine max]
Length = 461
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 72/136 (52%), Gaps = 18/136 (13%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
K++V VP+ TE ++ +F+E + E+ ++K K T +G CFV + EAD+A+
Sbjct: 73 CKVYVAPVPRTATEDEICTVFEEHGTIVEIVLLKHKKTGTRQGSCFVKYATFDEADRAIK 132
Query: 75 ACHNKKTLPGASSPLQVKYADGELERL------------------EHKLFIGMLPKNVSE 116
A +NK T G S P+ VK+AD ELERL K+F+ + K +
Sbjct: 133 ALNNKYTFAGESYPVVVKFADRELERLGVRGFCRNMEKKDPLEEVADKVFVSSINKEATN 192
Query: 117 AEVSALFSIYGTIKDL 132
E+ +FS YG ++D+
Sbjct: 193 KEIEDIFSPYGHVEDI 208
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEA 162
K+++ +P+ +E E+ +F +GTI ++ +L+ + T +G F+KY T ++A A++A
Sbjct: 74 KVYVAPVPRTATEDEICTVFEEHGTIVEIVLLKHKKTGTRQGSCFVKYATFDEADRAIKA 133
Query: 163 INGKHKMEGSSVPLVVKWADTEKERQARR 191
+N K+ G S P+VVK+AD E ER R
Sbjct: 134 LNNKYTFAGESYPVVVKFADRELERLGVR 162
>gi|159164251|pdb|2DNH|A Chain A, Solution Structure Of Rna Binding Domain In Bruno-Like 5
Rna Binding Protein
Length = 105
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 58/85 (68%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K SE +V LF +G I + +LRG +SKGCAF+K+ + +A AA+
Sbjct: 15 DRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIH 74
Query: 162 AINGKHKMEGSSVPLVVKWADTEKE 186
A++G M G+S LVVK+ADT+KE
Sbjct: 75 ALHGSQTMPGASSSLVVKFADTDKE 99
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K +E +L +F+ F ++DE +++ +S+GC FV S EA A++A
Sbjct: 17 KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDG-SSKGCAFVKFSSHTEAQAAIHA 75
Query: 76 CHNKKTLPGASSPLQVKYADGELE 99
H +T+PGASS L VK+AD + E
Sbjct: 76 LHGSQTMPGASSSLVVKFADTDKE 99
>gi|19909958|dbj|BAB87830.1| elav-type ribonucleoprotein-3 [Gallus gallus]
Length = 327
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 61/87 (70%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLFIGM+ K +E ++ +FS +G I++ +ILRG S+GCAF+ + T+ A A++
Sbjct: 12 DRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIK 71
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQ 188
A++ MEG S P+VVK+ADT+K+++
Sbjct: 72 AMHQSQTMEGCSSPIVVKFADTQKDKE 98
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Query: 4 SKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVIC 63
+ EK ++ E KLF+G V K E + MF F ++E I++ SRGC FV
Sbjct: 2 ADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAFVTF 60
Query: 64 PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER 100
+R A A+ A H +T+ G SSP+ VK+AD + ++
Sbjct: 61 STRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDK 97
>gi|312384171|gb|EFR28963.1| hypothetical protein AND_02453 [Anopheles darlingi]
Length = 400
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 72/127 (56%), Gaps = 26/127 (20%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K +E +V LFS +G I++ +LR SKGCAF+ + TK+ A++A++
Sbjct: 156 KRKLFVGMLSKKYNENDVRHLFSGHGVIEECTVLRDPSGLSKGCAFVTFATKQSAISAIK 215
Query: 162 AI---------NGKHK-----------------MEGSSVPLVVKWADTEKERQARRAQKA 195
+ N K+K MEG S PLVVK+ADT+KE+ A+R Q+
Sbjct: 216 VLFRNSRTGRQNVKYKLLPPMHPVMSQLHQSKTMEGCSAPLVVKFADTQKEKDAKRMQQM 275
Query: 196 QSQANNL 202
QS N+
Sbjct: 276 QSNLWNI 282
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 27/124 (21%)
Query: 3 ESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVI 62
E ++++ ++ KLFVG + K E + +F +++E +++D + S+GC FV
Sbjct: 145 EKDRDQEGLVDKRKLFVGMLSKKYNENDVRHLFSGHGVIEECTVLRDPSG-LSKGCAFVT 203
Query: 63 CPSRQEADKAVNAC--------------------------HNKKTLPGASSPLQVKYADG 96
++Q A A+ H KT+ G S+PL VK+AD
Sbjct: 204 FATKQSAISAIKVLFRNSRTGRQNVKYKLLPPMHPVMSQLHQSKTMEGCSAPLVVKFADT 263
Query: 97 ELER 100
+ E+
Sbjct: 264 QKEK 267
>gi|400234898|gb|AFP74112.1| poly-A binding protein, partial [Nicotiana benthamiana]
Length = 643
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 169/383 (44%), Gaps = 72/383 (18%)
Query: 5 KKEKKSSEERVK---LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFV 61
K+E+ + ++ + +FV + + E +L +F EF + V ++KD+ + SR FV
Sbjct: 193 KQERDMAVDKTRFTNVFVKNLSESTLEEELRKIFGEFGTITSVAVMKDEDGK-SRCFGFV 251
Query: 62 ICPSRQEADKAVNACH-----NKKTLPGASSPLQVKYADGELERLEHK------------ 104
+ ++A +AV A + NK G + K ++ E+E L+H+
Sbjct: 252 NFENAEDAARAVEALNGYKLDNKDWFVGRAQ----KKSEREME-LKHRFEQSAQEAVDKS 306
Query: 105 ----LFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAAL 160
L++ L ++S+ ++ LFS YGTI +++R SKG F+ + T E+A AL
Sbjct: 307 QGLNLYLKNLDDSISDDKLKELFSPYGTITSCKVMRDPSGVSKGSGFVAFSTPEEASRAL 366
Query: 161 EAINGKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQANNLPNADSQHPSL-------- 212
+NGK + S PL V A ++ER+A R Q SQ + A S P +
Sbjct: 367 SEMNGKMVV---SKPLYVALAQRKEERRA-RLQAQFSQMRPIAMASSVAPRMPMYPPGGP 422
Query: 213 -------FGALPMGYAPPYNGYGYQASGSYGL------MQYRLPPM-------QNQPGFH 252
+G P PP G+GYQ G+ M PM Q G
Sbjct: 423 GLGQQIFYGQPPPAMLPPQAGFGYQQQLVPGMRPGGGPMPNFFMPMVQQGQQGQRPGGRR 482
Query: 253 GIIPPVNQGNAMRGASPDLSSNMGP--RNYAMPP-SGFVGSGYPAVPGLQYPMPYPGGML 309
G P+ QG P + M P R Y PP G +P V G + +PY +
Sbjct: 483 GGAVPLQQGQQ---PVPLMQQQMFPRGRGYRYPPGRGLPDGAFPGVGGGMFSIPYD---I 536
Query: 310 GHRPLNNSP-GSVSPAVANSNPS 331
G R + P G+++ A+AN++P+
Sbjct: 537 GGRIVQPIPVGALATALANASPT 559
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 6/152 (3%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 76
L+VG + ++T++QL +F + V V + +D T++ S G +V + Q+A +A+
Sbjct: 29 LYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQRSLGYGYVNYGNPQDAARALEVL 88
Query: 77 HNKKTLPGASSPLQVKYA--DGELERLEH-KLFIGMLPKNVSEAEVSALFSIYGTIKDLQ 133
+ P P+++ Y+ D + R + +FI L K + + FS +G I +
Sbjct: 89 N---FTPLHGKPIRIMYSNRDPTIRRSGNGNIFIKNLDKAIDHKALHDTFSAFGNILSCK 145
Query: 134 ILRGSQQTSKGCAFLKYETKEQALAALEAING 165
+ S SKG F++Y++ E A A+E +NG
Sbjct: 146 VAVDSSGQSKGYGFVQYDSDEAAQKAIEKLNG 177
>gi|21355069|ref|NP_650473.1| CG5213 [Drosophila melanogaster]
gi|7300034|gb|AAF55205.1| CG5213 [Drosophila melanogaster]
gi|19528057|gb|AAL90143.1| AT22957p [Drosophila melanogaster]
gi|220949694|gb|ACL87390.1| CG5213-PA [synthetic construct]
gi|220958914|gb|ACL92000.1| CG5213-PA [synthetic construct]
Length = 251
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 94/177 (53%), Gaps = 10/177 (5%)
Query: 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCC--FVICPSRQEADK 71
+ L + +P+ MTE++L +F +F + + II+ + T S CC FV S ++A
Sbjct: 40 KTNLILNYLPQDMTESELHRLFSKFGEIRKAKIIRHRRTGIS--CCYGFVDYVSERQAAA 97
Query: 72 AVNACHNKKTLPGASSPLQVKYAD-GELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIK 130
AVN +T L+V +A E E L++G LP + E +V LF+ YG I
Sbjct: 98 AVNGMDGYET---RGKRLKVAFARPSEYESTSSSLYVGNLPTYMDEKKVRELFATYGNIV 154
Query: 131 DLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 186
D+ +LR S+G AFL++E A A ++ ++ +EG+S PL VK+ + EK+
Sbjct: 155 DVNLLRHKFNNRSRGVAFLQFELVRDAEVAKYGMD-RYMIEGASRPLTVKFVEREKK 210
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 100 RLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGC-AFLKYETKEQALA 158
R++ L + LP++++E+E+ LFS +G I+ +I+R + C F+ Y ++ QA A
Sbjct: 38 RMKTNLILNYLPQDMTESELHRLFSKFGEIRKAKIIRHRRTGISCCYGFVDYVSERQAAA 97
Query: 159 ALEAING 165
A+ ++G
Sbjct: 98 AVNGMDG 104
>gi|296484904|tpg|DAA27019.1| TPA: ELAV-like 2-like [Bos taurus]
Length = 620
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 113/214 (52%), Gaps = 10/214 (4%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ +L ++F ++ +++DK T S G FV ++A
Sbjct: 308 TEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 367
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+KA+N + + + ++V YA + + L++ LPK +++ E+ LFS YG
Sbjct: 368 EKAINTLNGLRL---QTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGR 424
Query: 129 IKDLQILRGSQQT--SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TE 184
I +IL Q T S+G F++++ + +A A++ +NG+ K G++ P+ VK+A+ ++
Sbjct: 425 IITSRILV-DQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFANNPSQ 482
Query: 185 KERQARRAQKAQSQANNLPNADSQHPSLFGALPM 218
K QA +Q QS P +Q F PM
Sbjct: 483 KTNQAILSQLYQSPNRRYPGPLAQQAQRFRFSPM 516
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 82/201 (40%), Gaps = 53/201 (26%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 76
L+V +PK MT+ +L +F ++ + I+ D+ T SRG F+ R EA++A+
Sbjct: 401 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 460
Query: 77 HNKKTLPGASSPLQVKYADGELERLEHKL------------------------------- 105
+ +K PGA+ P+ VK+A+ ++ +
Sbjct: 461 NGQKP-PGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRFSPMTID 519
Query: 106 --------------------FIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKG 144
F+ L + E+ + +F +G + +++++R + KG
Sbjct: 520 GMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKG 579
Query: 145 CAFLKYETKEQALAALEAING 165
F+ ++A A+ ++NG
Sbjct: 580 FGFVTMTNYDEAAMAIASLNG 600
>gi|355685803|gb|AER97853.1| ELAV-like protein 1 [Mustela putorius furo]
Length = 343
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 97/171 (56%), Gaps = 8/171 (4%)
Query: 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
R L V +P++MT+ +L ++F V+ +I+DK S G FV + ++A++A+
Sbjct: 37 RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAI 96
Query: 74 NACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
N + L S ++V YA E + + L+I LP+ +++ +V +FS +G I +
Sbjct: 97 NTLNG---LRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINS 153
Query: 133 QILRGSQQT--SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
++L Q T S+G AF++++ + +A A+ + NG HK GSS P+ VK+A
Sbjct: 154 RVLV-DQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPITVKFA 202
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 82/201 (40%), Gaps = 53/201 (26%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 76
L++ +P+ MT+ + MF F + ++ D+TT SRG F+ R EA++A+ +
Sbjct: 126 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 185
Query: 77 HNKKTLPGASSPLQVKYAD--------GELERLEHK------------------------ 104
+ K PG+S P+ VK+A L +L H
Sbjct: 186 NGHKP-PGSSEPITVKFAANPNQNKNVALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVD 244
Query: 105 -------------------LFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKG 144
+FI L ++ E + +F +G + +++++R + KG
Sbjct: 245 HMSGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKG 304
Query: 145 CAFLKYETKEQALAALEAING 165
F+ E+A A+ ++NG
Sbjct: 305 FGFVTMTNYEEAAMAIASLNG 325
>gi|297632376|ref|NP_001172077.1| ELAV-like protein 1 [Oryctolagus cuniculus]
gi|296399062|gb|ADH10369.1| embryonic lethal abnormal vision-like 1 protein [Oryctolagus
cuniculus]
Length = 326
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 97/171 (56%), Gaps = 8/171 (4%)
Query: 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
R L V +P++MT+ +L ++F V+ +I+DK S G FV + ++A+KA+
Sbjct: 19 RTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAEKAI 78
Query: 74 NACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
N + L S ++V YA E + + L+I LP+ +++ +V +FS +G I +
Sbjct: 79 NTLNG---LRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINS 135
Query: 133 QILRGSQQT--SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
++L Q T S+G AF++++ + +A A+ + NG HK GSS P+ VK+A
Sbjct: 136 RVLV-DQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPITVKFA 184
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 82/201 (40%), Gaps = 53/201 (26%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 76
L++ +P+ MT+ + MF F + ++ D+TT SRG F+ R EA++A+ +
Sbjct: 108 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 167
Query: 77 HNKKTLPGASSPLQVKYAD--------GELERLEHK------------------------ 104
+ K PG+S P+ VK+A L +L H
Sbjct: 168 NGHKP-PGSSEPITVKFAANPNQNKNVALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVD 226
Query: 105 -------------------LFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKG 144
+FI L ++ E + +F +G + +++++R + KG
Sbjct: 227 HMSGLSGVNVPGNASSGWCIFIYNLGQDAHEGILWQMFGPFGAVTNVKVIRDFNTNKCKG 286
Query: 145 CAFLKYETKEQALAALEAING 165
F+ E+A A+ ++NG
Sbjct: 287 FGFVTMTNYEEAAMAIASLNG 307
>gi|432114336|gb|ELK36264.1| CUGBP Elav-like family member 3 [Myotis davidii]
Length = 435
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 57/85 (67%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLFVGQ+P+H+ E L +F++F + E+ +IKDK T +GC F+ +R A KA
Sbjct: 5 DAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKA 64
Query: 73 VNACHNKKTLPGASSPLQVKYADGE 97
+A H +KTLPG + P+QVK AD E
Sbjct: 65 QSALHEQKTLPGMNRPIQVKPADSE 89
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 96 GELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQ 155
G LE + KLF+GML K ++ +V +F +GTI + +LRG TSKGCAF+K++T +
Sbjct: 169 GPLE--DRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAE 226
Query: 156 ALAALEAINGKHKM 169
A AA+ ++ +
Sbjct: 227 AQAAINTLHSSRTL 240
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEA 162
KLF+G +P+++ E ++ +F +G I +L +++ KGCAFL Y ++ AL A A
Sbjct: 8 KLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSA 67
Query: 163 INGKHKMEGSSVPLVVKWADTE 184
++ + + G + P+ VK AD+E
Sbjct: 68 LHEQKTLPGMNRPIQVKPADSE 89
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIK--DKTTRASRGCCFVICPSRQEAD 70
E KLFVG + K T+ + MF+ F +DE +++ D T S+GC FV + EA
Sbjct: 172 EDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGT---SKGCAFVKFQTHAEAQ 228
Query: 71 KAVNACHNKKTLP 83
A+N H+ +TLP
Sbjct: 229 AAINTLHSSRTLP 241
>gi|395546429|ref|XP_003775090.1| PREDICTED: uncharacterized protein LOC100934042 [Sarcophilus
harrisii]
Length = 819
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 97/182 (53%), Gaps = 6/182 (3%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
E SS+ + L + +P+ MTE +L ++F + +++D+ T S G F+
Sbjct: 495 EGTSSDSKTNLIINYLPQSMTEEELRSLFARVGKIQSCKLVRDRVTGQSLGYGFIDYVHP 554
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSI 125
++A++AV + + P ++V YA + + L+I LPKN+++ E+ LFS
Sbjct: 555 RDAERAVCLLNGLQCPPKT---IKVSYARPNSSSIRDANLYINGLPKNMTQKELEHLFSP 611
Query: 126 YGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184
YG I +IL TS+G F+++ K +A A++A+NG+ K G PLVV++A +
Sbjct: 612 YGHIITSRILTDKASGTSRGVGFIRFNMKSEAEEAIKALNGQ-KPCGILEPLVVRFAHNQ 670
Query: 185 KE 186
+
Sbjct: 671 TQ 672
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 6 KEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPS 65
+ SS L++ +PK+MT+ +L +F + + I+ DK + SRG F+
Sbjct: 580 RPNSSSIRDANLYINGLPKNMTQKELEHLFSPYGHIITSRILTDKASGTSRGVGFIRFNM 639
Query: 66 RQEADKAVNACHNKKTLPGASSPLQVKYADGELE 99
+ EA++A+ A + +K G PL V++A + +
Sbjct: 640 KSEAEEAIKALNGQKPC-GILEPLVVRFAHNQTQ 672
>gi|255075981|ref|XP_002501665.1| predicted protein [Micromonas sp. RCC299]
gi|226516929|gb|ACO62923.1| predicted protein [Micromonas sp. RCC299]
Length = 667
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 101/190 (53%), Gaps = 16/190 (8%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
++V + + + E L +F +F V+ +I+D +T +SRG FV +A+ A+
Sbjct: 32 NVYVKNLSEDVDELTLKGVFDKFGAVESCCVIRDVSTNSSRGFGFVKFMQVHQAEAAIKE 91
Query: 76 CHNKKTLPGASSPLQVKYADGE---------LERLEHKLFIGMLPKNVSEAEVSALFSIY 126
N K + G L+VK+A+ + + + +++ LP +E E+ A F I+
Sbjct: 92 M-NGKVIRG--KVLEVKFANSDSSATTAASGVGTISDNIYVKGLPPLWTEVELRAFFKIF 148
Query: 127 GTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 186
GTI + ++L S T+ G A +++ + EQA +A+ NG+ G VPLV+++AD+
Sbjct: 149 GTIIECRLLHASGTTTAG-ALIRFSSMEQAASAVVTANGRVP-AGGQVPLVIRFADSHS- 205
Query: 187 RQARRAQKAQ 196
+ RR+ K++
Sbjct: 206 -KTRRSSKSE 214
>gi|301773128|ref|XP_002921958.1| PREDICTED: ELAV-like protein 1-like isoform 2 [Ailuropoda
melanoleuca]
Length = 325
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 97/171 (56%), Gaps = 8/171 (4%)
Query: 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
R L V +P++MT+ +L ++F V+ +I+DK S G FV + ++A++A+
Sbjct: 19 RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAI 78
Query: 74 NACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
N + L S ++V YA E + + L+I LP+ +++ +V +FS +G I +
Sbjct: 79 NTLNG---LRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINS 135
Query: 133 QILRGSQQT--SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
++L Q T S+G AF++++ + +A A+ + NG HK GSS P+ VK+A
Sbjct: 136 RVLV-DQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPITVKFA 184
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 86/209 (41%), Gaps = 55/209 (26%)
Query: 11 SEERVK---LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQ 67
S E +K L++ +P+ MT+ + MF F + ++ D+TT SRG F+ R
Sbjct: 99 SSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRS 158
Query: 68 EADKAVNACHNKKTLPGASSPLQVKYAD--------GELERLEHK--------------- 104
EA++A+ + + K PG+S P+ VK+A L +L H
Sbjct: 159 EAEEAITSFNGHKP-PGSSEPITVKFAANPNQNKNVALLSQLYHSPARRFGGPPPSKGRF 217
Query: 105 ---------------------------LFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG 137
+FI L ++ E + +F +G + +++++R
Sbjct: 218 RFSPMGVDHMSGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRD 277
Query: 138 -SQQTSKGCAFLKYETKEQALAALEAING 165
+ KG F+ E+A A+ ++NG
Sbjct: 278 FNTNKCKGFGFVTMTNYEEAAMAIASLNG 306
>gi|119589356|gb|EAW68950.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R), isoform CRA_b [Homo sapiens]
Length = 445
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 97/171 (56%), Gaps = 8/171 (4%)
Query: 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
R L V +P++MT+ +L ++F V+ +I+DK S G FV + ++A++A+
Sbjct: 138 RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAI 197
Query: 74 NACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
N + L S ++V YA E + + L+I LP+ +++ +V +FS +G I +
Sbjct: 198 NTLNG---LRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINS 254
Query: 133 QILRGSQQT--SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
++L Q T S+G AF++++ + +A A+ + NG HK GSS P+ VK+A
Sbjct: 255 RVLV-DQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPITVKFA 303
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 82/201 (40%), Gaps = 53/201 (26%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 76
L++ +P+ MT+ + MF F + ++ D+TT SRG F+ R EA++A+ +
Sbjct: 227 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 286
Query: 77 HNKKTLPGASSPLQVKYAD--------GELERLEHK------------------------ 104
+ K PG+S P+ VK+A L +L H
Sbjct: 287 NGHKP-PGSSEPITVKFAANPNQNKNVALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVD 345
Query: 105 -------------------LFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKG 144
+FI L ++ E + +F +G + +++++R + KG
Sbjct: 346 HMSGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKG 405
Query: 145 CAFLKYETKEQALAALEAING 165
F+ E+A A+ ++NG
Sbjct: 406 FGFVTMTNYEEAAMAIASLNG 426
>gi|325562941|gb|ADZ31338.1| cell size RNA recognition motif 2 [synthetic construct]
Length = 98
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 57/82 (69%)
Query: 101 LEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAAL 160
+E KLF+G L K +E EV LF +G ++D+ ++R + S+GC F+KY +KE A+AA+
Sbjct: 4 VEFKLFVGSLNKQATENEVEELFLQFGRVEDVYLMRDEYRQSRGCGFVKYSSKETAMAAI 63
Query: 161 EAINGKHKMEGSSVPLVVKWAD 182
+ +NG + M G + PL+V++AD
Sbjct: 64 DGLNGTYTMRGCNQPLIVRFAD 85
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K TE ++ +F +F V++V +++D+ R SRGC FV S++ A A++
Sbjct: 7 KLFVGSLNKQATENEVEELFLQFGRVEDVYLMRDEY-RQSRGCGFVKYSSKETAMAAIDG 65
Query: 76 CHNKKTLPGASSPLQVKYAD 95
+ T+ G + PL V++AD
Sbjct: 66 LNGTYTMRGCNQPLIVRFAD 85
>gi|149716413|ref|XP_001497933.1| PREDICTED: ELAV-like protein 1 [Equus caballus]
Length = 326
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 97/171 (56%), Gaps = 8/171 (4%)
Query: 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
R L V +P++MT+ +L ++F V+ +I+DK S G FV + ++A++AV
Sbjct: 19 RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAV 78
Query: 74 NACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
N + L S ++V YA E + + L+I LP+ +++ +V +FS +G I +
Sbjct: 79 NTLNG---LRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINS 135
Query: 133 QILRGSQQT--SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
++L Q T S+G AF++++ + +A A+ + NG HK GSS P+ VK+A
Sbjct: 136 RVLV-DQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPITVKFA 184
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 82/201 (40%), Gaps = 53/201 (26%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 76
L++ +P+ MT+ + MF F + ++ D+TT SRG F+ R EA++A+ +
Sbjct: 108 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 167
Query: 77 HNKKTLPGASSPLQVKYAD--------GELERLEHK------------------------ 104
+ K PG+S P+ VK+A L +L H
Sbjct: 168 NGHKP-PGSSEPITVKFAANPNQNKNVALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVD 226
Query: 105 -------------------LFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKG 144
+FI L ++ E + +F +G + +++++R + KG
Sbjct: 227 HMSGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKG 286
Query: 145 CAFLKYETKEQALAALEAING 165
F+ E+A A+ ++NG
Sbjct: 287 FGFVTMTNYEEAAMAIASLNG 307
>gi|358412972|ref|XP_887465.4| PREDICTED: ELAV-like protein 3 isoform 8 [Bos taurus]
Length = 511
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 103/194 (53%), Gaps = 8/194 (4%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV +A
Sbjct: 185 TDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDA 244
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
DKA+N + K + ++V YA + + L++ LPK +S+ E+ LFS YG
Sbjct: 245 DKAINTLNGLKL---QTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGR 301
Query: 129 IKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL S+G F++++ + +A A++ +NG+ + G++ P+ VK+A+ ++K
Sbjct: 302 IITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQK 360
Query: 186 ERQARRAQKAQSQA 199
QA Q QS A
Sbjct: 361 TGQALLTQLYQSSA 374
>gi|354491615|ref|XP_003507950.1| PREDICTED: ELAV-like protein 2 isoform 3 [Cricetulus griseus]
Length = 356
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 111/214 (51%), Gaps = 8/214 (3%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
K+ + + L V +P++MT+ +L ++F ++ +++DK T S G FV ++
Sbjct: 43 KTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 102
Query: 69 ADKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYG 127
A+KA+N + L + ++V YA + + L++ LPK +++ E+ LFS YG
Sbjct: 103 AEKAINTLNG---LRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYG 159
Query: 128 TIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TE 184
I +IL S+G F++++ + +A A++ +NG K G++ P+ VK+A+ ++
Sbjct: 160 RIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNG-QKPPGATEPITVKFANNPSQ 218
Query: 185 KERQARRAQKAQSQANNLPNADSQHPSLFGALPM 218
K QA +Q QS P +Q F PM
Sbjct: 219 KTNQAILSQLYQSPNRRYPGPLAQQAQRFRFSPM 252
>gi|332264173|ref|XP_003281121.1| PREDICTED: ELAV-like protein 1 [Nomascus leucogenys]
Length = 326
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 97/171 (56%), Gaps = 8/171 (4%)
Query: 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
R L V +P++MT+ +L ++F V+ +I+DK S G FV + ++A++A+
Sbjct: 19 RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAI 78
Query: 74 NACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
N + L S ++V YA E + + L+I LP+ +++ +V +FS +G I +
Sbjct: 79 NTLNG---LRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINS 135
Query: 133 QILRGSQQT--SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
++L Q T S+G AF++++ + +A A+ + NG HK GSS P+ VK+A
Sbjct: 136 RVLV-DQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPITVKFA 184
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 86/210 (40%), Gaps = 56/210 (26%)
Query: 11 SEERVK---LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQ 67
S E +K L++ +P+ MT+ + MF F + ++ D+TT SRG F+ R
Sbjct: 99 SSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRS 158
Query: 68 EADKAVNACHNKKTLPGASSPLQVKYAD--------GELERLEHK--------------- 104
EA++A+ + + K PG+S P+ VK+A L +L H
Sbjct: 159 EAEEAITSFNGHKP-PGSSEPITVKFAANPNQNKNVALLSQLYHSPARRFGGPVHHQAQR 217
Query: 105 ----------------------------LFIGMLPKNVSEAEVSALFSIYGTIKDLQILR 136
+FI L ++ E + +F +G + +++++R
Sbjct: 218 FRFSPMGVDHMSGLSGINVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIR 277
Query: 137 G-SQQTSKGCAFLKYETKEQALAALEAING 165
+ KG F+ E+A A+ ++NG
Sbjct: 278 DFNTNKCKGFGFVTMTNYEEAAMAIASLNG 307
>gi|38201714|ref|NP_001410.2| ELAV-like protein 1 [Homo sapiens]
gi|114675067|ref|XP_001156643.1| PREDICTED: ELAV-like protein 1 isoform 2 [Pan troglodytes]
gi|395750352|ref|XP_002828622.2| PREDICTED: ELAV-like protein 1 [Pongo abelii]
gi|395841768|ref|XP_003793705.1| PREDICTED: ELAV-like protein 1 [Otolemur garnettii]
gi|402914021|ref|XP_003919435.1| PREDICTED: ELAV-like protein 1 [Papio anubis]
gi|403296075|ref|XP_003938946.1| PREDICTED: ELAV-like protein 1 [Saimiri boliviensis boliviensis]
gi|426386981|ref|XP_004059957.1| PREDICTED: ELAV-like protein 1 isoform 1 [Gorilla gorilla gorilla]
gi|20981691|sp|Q15717.2|ELAV1_HUMAN RecName: Full=ELAV-like protein 1; AltName: Full=Hu-antigen R;
Short=HuR
gi|13097228|gb|AAH03376.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [Homo sapiens]
gi|32879929|gb|AAP88795.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [Homo sapiens]
gi|60654991|gb|AAX32059.1| ELAV-like 1 [synthetic construct]
gi|60654993|gb|AAX32060.1| ELAV-like 1 [synthetic construct]
gi|60654995|gb|AAX32061.1| ELAV-like 1 [synthetic construct]
gi|60654997|gb|AAX32062.1| ELAV-like 1 [synthetic construct]
gi|119589355|gb|EAW68949.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R), isoform CRA_a [Homo sapiens]
gi|157928080|gb|ABW03336.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [synthetic construct]
gi|157928791|gb|ABW03681.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [synthetic construct]
gi|208966198|dbj|BAG73113.1| ELAV-like 1protein [synthetic construct]
gi|355703066|gb|EHH29557.1| hypothetical protein EGK_10021 [Macaca mulatta]
gi|355755385|gb|EHH59132.1| hypothetical protein EGM_09177 [Macaca fascicularis]
gi|380784245|gb|AFE63998.1| ELAV-like protein 1 [Macaca mulatta]
gi|383416395|gb|AFH31411.1| ELAV-like protein 1 [Macaca mulatta]
gi|384945706|gb|AFI36458.1| ELAV-like protein 1 [Macaca mulatta]
gi|410212674|gb|JAA03556.1| ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) [Pan
troglodytes]
gi|410265350|gb|JAA20641.1| ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) [Pan
troglodytes]
gi|410305890|gb|JAA31545.1| ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) [Pan
troglodytes]
gi|410342973|gb|JAA40433.1| ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) [Pan
troglodytes]
Length = 326
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 97/171 (56%), Gaps = 8/171 (4%)
Query: 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
R L V +P++MT+ +L ++F V+ +I+DK S G FV + ++A++A+
Sbjct: 19 RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAI 78
Query: 74 NACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
N + L S ++V YA E + + L+I LP+ +++ +V +FS +G I +
Sbjct: 79 NTLNG---LRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINS 135
Query: 133 QILRGSQQT--SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
++L Q T S+G AF++++ + +A A+ + NG HK GSS P+ VK+A
Sbjct: 136 RVLV-DQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPITVKFA 184
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 86/210 (40%), Gaps = 56/210 (26%)
Query: 11 SEERVK---LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQ 67
S E +K L++ +P+ MT+ + MF F + ++ D+TT SRG F+ R
Sbjct: 99 SSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRS 158
Query: 68 EADKAVNACHNKKTLPGASSPLQVKYAD--------GELERLEHK--------------- 104
EA++A+ + + K PG+S P+ VK+A L +L H
Sbjct: 159 EAEEAITSFNGHKP-PGSSEPITVKFAANPNQNKNVALLSQLYHSPARRFGGPVHHQAQR 217
Query: 105 ----------------------------LFIGMLPKNVSEAEVSALFSIYGTIKDLQILR 136
+FI L ++ E + +F +G + +++++R
Sbjct: 218 FRFSPMGVDHMSGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIR 277
Query: 137 G-SQQTSKGCAFLKYETKEQALAALEAING 165
+ KG F+ E+A A+ ++NG
Sbjct: 278 DFNTNKCKGFGFVTMTNYEEAAMAIASLNG 307
>gi|294867353|ref|XP_002765077.1| hypothetical protein Pmar_PMAR004534 [Perkinsus marinus ATCC 50983]
gi|239864957|gb|EEQ97794.1| hypothetical protein Pmar_PMAR004534 [Perkinsus marinus ATCC 50983]
Length = 691
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 115/236 (48%), Gaps = 13/236 (5%)
Query: 15 VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74
+KLFVG +P +TEA L +F + V E+ +I+ ++ S+GC ++ ++ E D +
Sbjct: 261 IKLFVGSIPFSITEADLEPLFTPYGEVVEL-VIQRQSDGRSKGCAWLRYATKAECDACIK 319
Query: 75 ACHNKKTLPGAS--SPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFS-IYGTIKD 131
A HN S S +QV+YA GEL+ +KLF+G +P + + ++A FS YG +++
Sbjct: 320 ALHNTYQWRTGSTWSLMQVRYAIGELDGYHNKLFVGGIPAYLDDGALTASFSTTYGPVRE 379
Query: 132 LQILR---GSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLV-VKWADTEKER 187
L LR G + FL+ E+ + LA ++ + + G P V V +A +
Sbjct: 380 LVSLRRGPGQSTNAVMVRFLRRESVNKLLA--DSRRRQIYLCGVYCPAVRVSYAHYNRHG 437
Query: 188 QARRAQKAQSQANNLPNAD---SQHPSLFGALPMGYAPPYNGYGYQASGSYGLMQY 240
+ KA ++ N L + SQ + MGY P G Q S+ M Y
Sbjct: 438 DRVFSTKATAEDNVLQEGEGVPSQRRVPPQSSTMGYPPALQGPPSQLQSSHPTMYY 493
>gi|332852452|ref|XP_001156587.2| PREDICTED: ELAV-like protein 1 isoform 1 [Pan troglodytes]
gi|397477357|ref|XP_003810039.1| PREDICTED: ELAV-like protein 1 [Pan paniscus]
gi|426386983|ref|XP_004059958.1| PREDICTED: ELAV-like protein 1 isoform 2 [Gorilla gorilla gorilla]
gi|194375035|dbj|BAG62630.1| unnamed protein product [Homo sapiens]
Length = 353
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 97/171 (56%), Gaps = 8/171 (4%)
Query: 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
R L V +P++MT+ +L ++F V+ +I+DK S G FV + ++A++A+
Sbjct: 46 RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAI 105
Query: 74 NACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
N + L S ++V YA E + + L+I LP+ +++ +V +FS +G I +
Sbjct: 106 NTLNG---LRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINS 162
Query: 133 QILRGSQQT--SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
++L Q T S+G AF++++ + +A A+ + NG HK GSS P+ VK+A
Sbjct: 163 RVLV-DQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPITVKFA 211
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 86/210 (40%), Gaps = 56/210 (26%)
Query: 11 SEERVK---LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQ 67
S E +K L++ +P+ MT+ + MF F + ++ D+TT SRG F+ R
Sbjct: 126 SSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRS 185
Query: 68 EADKAVNACHNKKTLPGASSPLQVKYAD--------GELERLEHK--------------- 104
EA++A+ + + K PG+S P+ VK+A L +L H
Sbjct: 186 EAEEAITSFNGHKP-PGSSEPITVKFAANPNQNKNVALLSQLYHSPARRFGGPVHHQAQR 244
Query: 105 ----------------------------LFIGMLPKNVSEAEVSALFSIYGTIKDLQILR 136
+FI L ++ E + +F +G + +++++R
Sbjct: 245 FRFSPMGVDHMSGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIR 304
Query: 137 G-SQQTSKGCAFLKYETKEQALAALEAING 165
+ KG F+ E+A A+ ++NG
Sbjct: 305 DFNTNKCKGFGFVTMTNYEEAAMAIASLNG 334
>gi|410053240|ref|XP_003316137.2| PREDICTED: LOW QUALITY PROTEIN: ELAV-like protein 3 [Pan
troglodytes]
Length = 447
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 97/182 (53%), Gaps = 6/182 (3%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV ++A
Sbjct: 150 TDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGVSLGXRFVKYSDPKKA 209
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
DKA+N K + +QV YA + + L++ LPK +S+ E+ LFS YG
Sbjct: 210 DKAINTLQGLKL---QTKTIQVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGR 266
Query: 129 IKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKER 187
I +IL S+G F++++ + +A A++ +NG+ + G++ + VK+A+ + R
Sbjct: 267 IITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAESITVKFANNQVRR 325
Query: 188 QA 189
+A
Sbjct: 326 RA 327
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 81/186 (43%), Gaps = 38/186 (20%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 76
L+V +PK M++ ++ +F ++ + I+ D+ T SRG F+ R EA++A+
Sbjct: 243 LYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 302
Query: 77 HNKKTLPGASSPLQVKYADGELERLEHKL------------------------------- 105
+ +K L GA+ + VK+A+ ++ R L
Sbjct: 303 NGQKPL-GAAESITVKFANNQVRRRAALLTPLSLIARFSPIAIDGMSGLAGVGLSGGAAG 361
Query: 106 -----FIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAA 159
F+ L E+ + LF +G + +++++R + KG F+ ++A A
Sbjct: 362 AGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMA 421
Query: 160 LEAING 165
+ ++NG
Sbjct: 422 IASLNG 427
>gi|351701320|gb|EHB04239.1| ELAV-like protein 1, partial [Heterocephalus glaber]
Length = 329
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 97/171 (56%), Gaps = 8/171 (4%)
Query: 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
R L V +P++MT+ +L ++F V+ +I+DK S G FV + ++A++A+
Sbjct: 22 RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAI 81
Query: 74 NACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
N + L S ++V YA E + + L+I LP+ +++ +V +FS +G I +
Sbjct: 82 NTLNG---LRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINS 138
Query: 133 QILRGSQQT--SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
++L Q T S+G AF++++ + +A A+ + NG HK GSS P+ VK+A
Sbjct: 139 RVLV-DQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPITVKFA 187
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 82/201 (40%), Gaps = 53/201 (26%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 76
L++ +P+ MT+ + MF F + ++ D+TT SRG F+ R EA++A+ +
Sbjct: 111 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 170
Query: 77 HNKKTLPGASSPLQVKYAD--------GELERLEHK------------------------ 104
+ K PG+S P+ VK+A L +L H
Sbjct: 171 NGHKP-PGSSEPITVKFAANPNQNKNVALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVD 229
Query: 105 -------------------LFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKG 144
+FI L ++ E + +F +G + +++++R + KG
Sbjct: 230 HMSGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKG 289
Query: 145 CAFLKYETKEQALAALEAING 165
F+ E+A A+ ++NG
Sbjct: 290 FGFVTMTNYEEAAMAIASLNG 310
>gi|296485880|tpg|DAA27995.1| TPA: ELAV-like protein 3-like [Bos taurus]
Length = 407
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 103/194 (53%), Gaps = 8/194 (4%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV +A
Sbjct: 81 TDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDA 140
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
DKA+N + K + ++V YA + + L++ LPK +S+ E+ LFS YG
Sbjct: 141 DKAINTLNGLKL---QTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGR 197
Query: 129 IKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL S+G F++++ + +A A++ +NG+ + G++ P+ VK+A+ ++K
Sbjct: 198 IITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQK 256
Query: 186 ERQARRAQKAQSQA 199
QA Q QS A
Sbjct: 257 TGQALLTQLYQSSA 270
>gi|73986922|ref|XP_854218.1| PREDICTED: ELAV-like protein 1 isoform 1 [Canis lupus familiaris]
gi|301773126|ref|XP_002921957.1| PREDICTED: ELAV-like protein 1-like isoform 1 [Ailuropoda
melanoleuca]
gi|344299314|ref|XP_003421331.1| PREDICTED: ELAV-like protein 1 [Loxodonta africana]
gi|281349989|gb|EFB25573.1| hypothetical protein PANDA_010904 [Ailuropoda melanoleuca]
Length = 326
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 97/171 (56%), Gaps = 8/171 (4%)
Query: 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
R L V +P++MT+ +L ++F V+ +I+DK S G FV + ++A++A+
Sbjct: 19 RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAI 78
Query: 74 NACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
N + L S ++V YA E + + L+I LP+ +++ +V +FS +G I +
Sbjct: 79 NTLNG---LRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINS 135
Query: 133 QILRGSQQT--SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
++L Q T S+G AF++++ + +A A+ + NG HK GSS P+ VK+A
Sbjct: 136 RVLV-DQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPITVKFA 184
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 82/201 (40%), Gaps = 53/201 (26%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 76
L++ +P+ MT+ + MF F + ++ D+TT SRG F+ R EA++A+ +
Sbjct: 108 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 167
Query: 77 HNKKTLPGASSPLQVKYAD--------GELERLEHK------------------------ 104
+ K PG+S P+ VK+A L +L H
Sbjct: 168 NGHKP-PGSSEPITVKFAANPNQNKNVALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVD 226
Query: 105 -------------------LFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKG 144
+FI L ++ E + +F +G + +++++R + KG
Sbjct: 227 HMSGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKG 286
Query: 145 CAFLKYETKEQALAALEAING 165
F+ E+A A+ ++NG
Sbjct: 287 FGFVTMTNYEEAAMAIASLNG 307
>gi|359067089|ref|XP_002688919.2| PREDICTED: ELAV-like protein 3 [Bos taurus]
Length = 408
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 103/194 (53%), Gaps = 8/194 (4%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV +A
Sbjct: 82 TDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDA 141
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
DKA+N + K + ++V YA + + L++ LPK +S+ E+ LFS YG
Sbjct: 142 DKAINTLNGLKL---QTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGR 198
Query: 129 IKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL S+G F++++ + +A A++ +NG+ + G++ P+ VK+A+ ++K
Sbjct: 199 IITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQK 257
Query: 186 ERQARRAQKAQSQA 199
QA Q QS A
Sbjct: 258 TGQALLTQLYQSSA 271
>gi|67968717|dbj|BAE00717.1| unnamed protein product [Macaca fascicularis]
Length = 326
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 97/171 (56%), Gaps = 8/171 (4%)
Query: 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
R L V +P++MT+ +L ++F V+ +I+DK S G FV + ++A++A+
Sbjct: 19 RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAI 78
Query: 74 NACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
N + L S ++V YA E + + L+I LP+ +++ +V +FS +G I +
Sbjct: 79 NTLNG---LRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINS 135
Query: 133 QILRGSQQT--SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
++L Q T S+G AF++++ + +A A+ + NG HK GSS P+ VK+A
Sbjct: 136 RVLV-DQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPITVKFA 184
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 82/201 (40%), Gaps = 53/201 (26%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 76
L++ +P+ MT+ + MF F + ++ D+TT SRG F+ R EA++A+ +
Sbjct: 108 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 167
Query: 77 HNKKTLPGASSPLQVKYAD--------GELERLEHK------------------------ 104
+ K PG+S P+ VK+A L +L H
Sbjct: 168 NGHKP-PGSSEPITVKFAANPNQNKNVALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVD 226
Query: 105 -------------------LFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKG 144
+FI L ++ E + +F +G + +++++R + KG
Sbjct: 227 HMSGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFEPFGAVTNVKVIRDFNTNKCKG 286
Query: 145 CAFLKYETKEQALAALEAING 165
F+ E+A A+ ++NG
Sbjct: 287 FGFVTMTNYEEAAMAIASLNG 307
>gi|1022961|gb|AAB41913.1| HuR RNA binding protein [Homo sapiens]
Length = 326
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 97/171 (56%), Gaps = 8/171 (4%)
Query: 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
R L V +P++MT+ +L ++F V+ +I+DK S G FV + ++A++A+
Sbjct: 19 RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAI 78
Query: 74 NACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
N + L S ++V YA E + + L+I LP+ +++ +V +FS +G I +
Sbjct: 79 NTLNG---LRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINS 135
Query: 133 QILRGSQQT--SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
++L Q T S+G AF++++ + +A A+ + NG HK GSS P+ VK+A
Sbjct: 136 RVLV-DQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPIAVKFA 184
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 86/210 (40%), Gaps = 56/210 (26%)
Query: 11 SEERVK---LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQ 67
S E +K L++ +P+ MT+ + MF F + ++ D+TT SRG F+ R
Sbjct: 99 SSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRS 158
Query: 68 EADKAVNACHNKKTLPGASSPLQVKYAD--------GELERLEHK--------------- 104
EA++A+ + + K PG+S P+ VK+A L +L H
Sbjct: 159 EAEEAITSFNGHKP-PGSSEPIAVKFAANPNQNKNVALLSQLYHSPARRFGGPVHHQAQR 217
Query: 105 ----------------------------LFIGMLPKNVSEAEVSALFSIYGTIKDLQILR 136
+FI L ++ E + +F +G + +++++R
Sbjct: 218 FRFSPMGVDHMSGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIR 277
Query: 137 G-SQQTSKGCAFLKYETKEQALAALEAING 165
+ KG F+ E+A A+ ++NG
Sbjct: 278 DFNTNKCKGFGFVTMTNYEEAAMAIASLNG 307
>gi|301773130|ref|XP_002921959.1| PREDICTED: ELAV-like protein 1-like isoform 3 [Ailuropoda
melanoleuca]
Length = 339
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 97/171 (56%), Gaps = 8/171 (4%)
Query: 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
R L V +P++MT+ +L ++F V+ +I+DK S G FV + ++A++A+
Sbjct: 19 RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAI 78
Query: 74 NACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
N + L S ++V YA E + + L+I LP+ +++ +V +FS +G I +
Sbjct: 79 NTLNG---LRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINS 135
Query: 133 QILRGSQQT--SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
++L Q T S+G AF++++ + +A A+ + NG HK GSS P+ VK+A
Sbjct: 136 RVLV-DQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPITVKFA 184
>gi|449533873|ref|XP_004173895.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like,
partial [Cucumis sativus]
Length = 270
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 84/171 (49%), Gaps = 20/171 (11%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
K+FVG +P+ T AQ + F ++ + + I+KD+ T RG FV DK +
Sbjct: 7 KIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIED 66
Query: 76 CH--------NKKTLP-GASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIY 126
H K+T+P G+SS K K+F+G +P +V E E F Y
Sbjct: 67 THIINGKQVEIKRTIPKGSSSSRDFK---------TKKIFVGGIPTSVDEDEFRDFFMQY 117
Query: 127 GTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPL 176
G +K+ QI+R S S+G F+ +ET EQA+ L A + +M GS V +
Sbjct: 118 GVVKEHQIMRDHSTSRSRGFGFITFET-EQAVDDLLANGNRLEMAGSQVEI 167
>gi|126323791|ref|XP_001366151.1| PREDICTED: ELAV-like protein 1 [Monodelphis domestica]
Length = 326
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 97/171 (56%), Gaps = 8/171 (4%)
Query: 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
R L V +P++MT+ +L ++F V+ +I+DK S G FV + ++A++A+
Sbjct: 19 RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAI 78
Query: 74 NACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
N + L S ++V YA E + + L+I LP+ +++ +V +FS +G I +
Sbjct: 79 NTLNG---LRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINS 135
Query: 133 QILRGSQQT--SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
++L Q T S+G AF++++ + +A A+ + NG HK GSS P+ VK+A
Sbjct: 136 RVLV-DQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPITVKFA 184
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 86/210 (40%), Gaps = 56/210 (26%)
Query: 11 SEERVK---LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQ 67
S E +K L++ +P+ MT+ + MF F + ++ D+TT SRG F+ R
Sbjct: 99 SSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRS 158
Query: 68 EADKAVNACHNKKTLPGASSPLQVKYAD--------GELERLEHK--------------- 104
EA++A+ + + K PG+S P+ VK+A L +L H
Sbjct: 159 EAEEAITSFNGHKP-PGSSEPITVKFAANPNQNKNVALLSQLYHSPARRFGGPVHHQAQR 217
Query: 105 ----------------------------LFIGMLPKNVSEAEVSALFSIYGTIKDLQILR 136
+FI L ++ E + +F +G + +++++R
Sbjct: 218 FRFSPMGVDHMTGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIR 277
Query: 137 G-SQQTSKGCAFLKYETKEQALAALEAING 165
+ KG F+ E+A A+ ++NG
Sbjct: 278 DFNTNKCKGFGFVTMTNYEEAAMAIASLNG 307
>gi|395513446|ref|XP_003760935.1| PREDICTED: ELAV-like protein 1 [Sarcophilus harrisii]
Length = 374
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 97/171 (56%), Gaps = 8/171 (4%)
Query: 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
R L V +P++MT+ +L ++F V+ +I+DK S G FV + ++A++A+
Sbjct: 67 RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAI 126
Query: 74 NACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
N + L S ++V YA E + + L+I LP+ +++ +V +FS +G I +
Sbjct: 127 NTLNG---LRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINS 183
Query: 133 QILRGSQQT--SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
++L Q T S+G AF++++ + +A A+ + NG HK GSS P+ VK+A
Sbjct: 184 RVLV-DQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPITVKFA 232
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 82/201 (40%), Gaps = 53/201 (26%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 76
L++ +P+ MT+ + MF F + ++ D+TT SRG F+ R EA++A+ +
Sbjct: 156 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 215
Query: 77 HNKKTLPGASSPLQVKYAD--------GELERLEHK------------------------ 104
+ K PG+S P+ VK+A L +L H
Sbjct: 216 NGHKP-PGSSEPITVKFAANPNQNKNVALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVD 274
Query: 105 -------------------LFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKG 144
+FI L ++ E + +F +G + +++++R + KG
Sbjct: 275 HMTGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKG 334
Query: 145 CAFLKYETKEQALAALEAING 165
F+ E+A A+ ++NG
Sbjct: 335 FGFVTMTNYEEAAMAIASLNG 355
>gi|343959022|dbj|BAK63366.1| ELAV-like protein 1 [Pan troglodytes]
Length = 305
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 97/171 (56%), Gaps = 8/171 (4%)
Query: 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
R L V +P++MT+ +L ++F V+ +I+DK S G FV + ++A++A+
Sbjct: 19 RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAI 78
Query: 74 NACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
N + L S ++V YA E + + L+I LP+ +++ +V +FS +G I +
Sbjct: 79 NTLNG---LRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINS 135
Query: 133 QILRGSQQT--SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
++L Q T S+G AF++++ + +A A+ + NG HK GSS P+ VK+A
Sbjct: 136 RVLV-DQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPITVKFA 184
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 81/180 (45%), Gaps = 32/180 (17%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 76
L++ +P+ MT+ + MF F + ++ D+TT SRG F+ R EA++A+ +
Sbjct: 108 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 167
Query: 77 HNKKTLPGASSPLQVKYADG------ELERLEHK------------------------LF 106
+ K PG+S P+ VK+A + +R +F
Sbjct: 168 NGHKP-PGSSEPITVKFAANPNPVHHQAQRFRFSPMGVDHMSGLSGVNVPGNASSGWCIF 226
Query: 107 IGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAING 165
I L ++ E + +F +G + +++++R + KG F+ E+A A+ ++NG
Sbjct: 227 IYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNG 286
>gi|23271926|gb|AAH36071.1| ELAVL4 protein [Homo sapiens]
Length = 366
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 113/218 (51%), Gaps = 11/218 (5%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV ++A
Sbjct: 41 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 100
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+KA+N + L + ++V YA + + L++ LPK +++ E+ LFS YG
Sbjct: 101 EKAINTLNG---LRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGR 157
Query: 129 IKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL G S+G F++++ + +A A++ +NG+ K G++ P+ VK+A+ ++K
Sbjct: 158 IITSRILVGQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFANNPSQK 216
Query: 186 ERQARRAQKAQSQANNLP---NADSQHPSLFGALPMGY 220
QA +Q QS P + +Q L L M Y
Sbjct: 217 SSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAY 254
>gi|340383337|ref|XP_003390174.1| PREDICTED: ELAV-like protein 3-like [Amphimedon queenslandica]
Length = 392
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 96/177 (54%), Gaps = 6/177 (3%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
++ + L V +P+ +TE L +F +F +V +IKDK++ S G FV S +EA+
Sbjct: 20 TKAKTNLIVNYLPQTLTEEGLKQLFSQFGVVLSCKLIKDKSSGISLGYGFVNYGSAEEAE 79
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERLEH-KLFIGMLPKNVSEAEVSALFSIYGTI 129
A+ N TL S L+V YA +++ +++ LP +S E+ ALF YGTI
Sbjct: 80 HAIQK-MNGTTL--ESKTLKVSYARPSSVAIKNANVYVANLPPQLSLTELDALFQPYGTI 136
Query: 130 KDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
++L +G F++++ QA A+ A+NGK ++ G + PL+VK+A+ K
Sbjct: 137 ITSKVLTDEDTGAGRGVGFVRFDKYTQAEVAIAALNGK-QLVGGTQPLLVKFANPPK 192
>gi|388326834|pdb|4ED5|A Chain A, Crystal Structure Of The Two N-Terminal Rrm Domains Of Hur
Complexed With Rna
gi|388326835|pdb|4ED5|B Chain B, Crystal Structure Of The Two N-Terminal Rrm Domains Of Hur
Complexed With Rna
Length = 177
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 97/171 (56%), Gaps = 8/171 (4%)
Query: 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
R L V +P++MT+ +L ++F V+ +I+DK S G FV + ++A++A+
Sbjct: 2 RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAI 61
Query: 74 NACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
N + L S ++V YA E + + L+I LP+ +++ +V +FS +G I +
Sbjct: 62 NTLNG---LRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINS 118
Query: 133 QILRGSQQT--SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
++L Q T S+G AF++++ + +A A+ + NG HK GSS P+ VK+A
Sbjct: 119 RVL-VDQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPITVKFA 167
>gi|345787182|ref|XP_542056.3| PREDICTED: ELAV-like protein 3 [Canis lupus familiaris]
Length = 647
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 102/194 (52%), Gaps = 8/194 (4%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV +A
Sbjct: 321 TDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDA 380
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
DKA+N + K + ++V YA + + L++ LPK +S+ E+ LFS YG
Sbjct: 381 DKAINTLNGLKL---QTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGR 437
Query: 129 IKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL S+G F++++ + +A A++ +NG+ + G++ P+ VK+A+ ++K
Sbjct: 438 IITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQK 496
Query: 186 ERQARRAQKAQSQA 199
QA QS A
Sbjct: 497 TGQALLTHLYQSSA 510
>gi|383859290|ref|XP_003705128.1| PREDICTED: sex-lethal homolog [Megachile rotundata]
Length = 386
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 98/184 (53%), Gaps = 7/184 (3%)
Query: 9 KSSEE-RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQ 67
KS+EE R L + +P+ MTE L ++F V+ ++KD T S G FV +
Sbjct: 106 KSNEEPRTNLIINYLPQSMTEKDLYSLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKAE 165
Query: 68 EADKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIY 126
+A A+N + L + L+V +A E + E L++ LP+N++E+++ +FS Y
Sbjct: 166 DAATAINTLNG---LQVQNKRLKVSFARPSGEEIKETNLYVTNLPRNITESQIDDIFSKY 222
Query: 127 GTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
G I IL+ +G AF++++ +E+A A+ ++G EG S PL VK A+
Sbjct: 223 GNIVQKNILKDKITGLPRGVAFVRFDKREEAQEAIARLHGTIP-EGGSEPLSVKIAEEHG 281
Query: 186 ERQA 189
+++A
Sbjct: 282 KQKA 285
>gi|313228868|emb|CBY18019.1| unnamed protein product [Oikopleura dioica]
Length = 398
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 58/93 (62%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K +E +V LF YG I++ ILR + +SKGCAF+K + A A+
Sbjct: 44 DRKLFVGMLSKTQTEEDVRRLFGKYGAIEECTILRTPEGSSKGCAFIKLANVQHAQNAIA 103
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
++G M G+S +VVK AD EKER R+ Q+
Sbjct: 104 QMHGSTTMPGASSSIVVKLADNEKERALRKMQQ 136
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K TE + +F ++ ++E I++ +S+GC F+ + Q A A+
Sbjct: 46 KLFVGMLSKTQTEEDVRRLFGKYGAIEECTILRTPEG-SSKGCAFIKLANVQHAQNAIAQ 104
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H T+PGASS + VK AD E ER K+
Sbjct: 105 MHGSTTMPGASSSIVVKLADNEKERALRKM 134
>gi|410950299|ref|XP_003981845.1| PREDICTED: ELAV-like protein 1 [Felis catus]
Length = 336
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 97/171 (56%), Gaps = 8/171 (4%)
Query: 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
R L V +P++MT+ +L ++F V+ +I+DK S G FV + ++A++A+
Sbjct: 29 RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAI 88
Query: 74 NACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
N + L S ++V YA E + + L+I LP+ +++ +V +FS +G I +
Sbjct: 89 NTLNG---LRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINS 145
Query: 133 QILRGSQQT--SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
++L Q T S+G AF++++ + +A A+ + NG HK GSS P+ VK+A
Sbjct: 146 RVLV-DQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPITVKFA 194
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 86/210 (40%), Gaps = 56/210 (26%)
Query: 11 SEERVK---LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQ 67
S E +K L++ +P+ MT+ + MF F + ++ D+TT SRG F+ R
Sbjct: 109 SSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRS 168
Query: 68 EADKAVNACHNKKTLPGASSPLQVKYAD--------GELERLEHK--------------- 104
EA++A+ + + K PG+S P+ VK+A L +L H
Sbjct: 169 EAEEAITSFNGHKP-PGSSEPITVKFAANPNQNKNMALLSQLYHSPARRFGGPVHHQAQR 227
Query: 105 ----------------------------LFIGMLPKNVSEAEVSALFSIYGTIKDLQILR 136
+FI L ++ E + +F +G + +++++R
Sbjct: 228 FRFSPMGVDHMSGLSGVNVPSNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIR 287
Query: 137 G-SQQTSKGCAFLKYETKEQALAALEAING 165
+ KG F+ E+A A+ ++NG
Sbjct: 288 DFNTNKCKGFGFVTMTNYEEAAMAIASLNG 317
>gi|313247153|emb|CBY35974.1| unnamed protein product [Oikopleura dioica]
Length = 414
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 58/93 (62%)
Query: 102 EHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALE 161
+ KLF+GML K +E +V LF YG I++ ILR + +SKGCAF+K + A A+
Sbjct: 44 DRKLFVGMLSKTQTEEDVRRLFGKYGAIEECTILRTPEGSSKGCAFIKLANVQHAQNAIA 103
Query: 162 AINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194
++G M G+S +VVK AD EKER R+ Q+
Sbjct: 104 QMHGSTTMPGASSSIVVKLADNEKERALRKMQQ 136
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 16 KLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75
KLFVG + K TE + +F ++ ++E I++ +S+GC F+ + Q A A+
Sbjct: 46 KLFVGMLSKTQTEEDVRRLFGKYGAIEECTILRTPEG-SSKGCAFIKLANVQHAQNAIAQ 104
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKL 105
H T+PGASS + VK AD E ER K+
Sbjct: 105 MHGSTTMPGASSSIVVKLADNEKERALRKM 134
>gi|305855162|ref|NP_001182263.1| ELAV-like protein 1 [Sus scrofa]
gi|285818484|gb|ADC38915.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 [Sus
scrofa]
gi|456753432|gb|JAA74168.1| ELAV-like 1 (Hu antigen R) [Sus scrofa]
Length = 326
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 97/171 (56%), Gaps = 8/171 (4%)
Query: 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
R L V +P++MT+ +L ++F ++ +I+DK S G FV + ++A++A+
Sbjct: 19 RTNLIVNYLPQNMTQEELRSLFSSIGEIESAKLIRDKVAGHSLGYGFVNYVTAKDAERAI 78
Query: 74 NACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
N + L S ++V YA E + + L+I LP+ +++ +V +FS +G I +
Sbjct: 79 NTLNG---LRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSPFGRIINS 135
Query: 133 QILRGSQQT--SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
++L Q T S+G AF++++ + +A A+ + NG HK GSS P+ VK+A
Sbjct: 136 RVLV-DQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPITVKFA 184
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 86/210 (40%), Gaps = 56/210 (26%)
Query: 11 SEERVK---LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQ 67
S E +K L++ +P+ MT+ + MF F + ++ D+TT SRG F+ R
Sbjct: 99 SSEVIKDANLYISGLPRTMTQKDVEDMFSPFGRIINSRVLVDQTTGLSRGVAFIRFDKRS 158
Query: 68 EADKAVNACHNKKTLPGASSPLQVKYAD--------GELERLEHK--------------- 104
EA++A+ + + K PG+S P+ VK+A L +L H
Sbjct: 159 EAEEAITSFNGHKP-PGSSEPITVKFAANPNQNKNVALLSQLYHSPARRFGGPVHHQAQR 217
Query: 105 ----------------------------LFIGMLPKNVSEAEVSALFSIYGTIKDLQILR 136
+FI L ++ E + +F +G + +++++R
Sbjct: 218 FRFSPMGVDHMSGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIR 277
Query: 137 G-SQQTSKGCAFLKYETKEQALAALEAING 165
+ KG F+ E+A A+ ++NG
Sbjct: 278 DFNTNKCKGFGFVTMTNYEEASMAIASLNG 307
>gi|156366101|ref|XP_001626979.1| predicted protein [Nematostella vectensis]
gi|156213874|gb|EDO34879.1| predicted protein [Nematostella vectensis]
Length = 335
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 95/183 (51%), Gaps = 5/183 (2%)
Query: 7 EKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSR 66
E +S+ER L + VP M++ + +F V +I+D+ T S G FV +
Sbjct: 2 ENGTSDERTNLIINYVPPSMSQEDIKKIFGTVGNVTSCKLIRDRATGQSLGYAFVNYDNP 61
Query: 67 QEADKAVNACHNKKTLPGASSPLQVKYADGELERLEH-KLFIGMLPKNVSEAEVSALFSI 125
+A+KAV + + + L+V +A +++ L+I LPK++ E EV ALF
Sbjct: 62 DDANKAVREMNGARL---QNKTLKVSFARPSSTEIKNANLYISGLPKDMKEEEVEALFKP 118
Query: 126 YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185
+G I ++L+ +G F++++ + +A A++ +N K + G++V L VK+A+
Sbjct: 119 FGKIITSKVLKDVSGEGRGTGFVRFDKRCEAQTAIDDLNNK-TLPGTNVKLTVKFANPPN 177
Query: 186 ERQ 188
RQ
Sbjct: 178 SRQ 180
>gi|359067954|ref|XP_002707879.2| PREDICTED: LOW QUALITY PROTEIN: eLAV (embryonic lethal, abnormal
vision, Drosophila)-like 2 (Hu antigen B)-like [Bos
taurus]
Length = 346
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 111/213 (52%), Gaps = 8/213 (3%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ +L ++F ++ +++DK T S G FV ++A
Sbjct: 34 TEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 93
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+KA+N + L + ++V YA + + L++ LPK +++ E+ LFS YG
Sbjct: 94 EKAINTLNG---LRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGR 150
Query: 129 IKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL S+G F++++ + +A A++ +NG+ K G++ P+ VK+A+ ++K
Sbjct: 151 IITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFANNPSQK 209
Query: 186 ERQARRAQKAQSQANNLPNADSQHPSLFGALPM 218
QA +Q QS P +Q F PM
Sbjct: 210 TNQAILSQLYQSPNRRYPGPLAQQAQRFRFSPM 242
>gi|397521309|ref|XP_003830739.1| PREDICTED: ELAV-like protein 2 isoform 2 [Pan paniscus]
gi|397521311|ref|XP_003830740.1| PREDICTED: ELAV-like protein 2 isoform 3 [Pan paniscus]
gi|397521313|ref|XP_003830741.1| PREDICTED: ELAV-like protein 2 isoform 4 [Pan paniscus]
Length = 346
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 111/213 (52%), Gaps = 8/213 (3%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ +L ++F ++ +++DK T S G FV ++A
Sbjct: 34 TEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 93
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+KA+N + L + ++V YA + + L++ LPK +++ E+ LFS YG
Sbjct: 94 EKAINTLNG---LRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGR 150
Query: 129 IKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL S+G F++++ + +A A++ +NG+ K G++ P+ VK+A+ ++K
Sbjct: 151 IITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFANNPSQK 209
Query: 186 ERQARRAQKAQSQANNLPNADSQHPSLFGALPM 218
QA +Q QS P +Q F PM
Sbjct: 210 TNQAILSQLYQSPNRRYPGPLAQQAQRFRFSPM 242
>gi|431093|gb|AAA58677.1| huc [Homo sapiens]
Length = 359
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 102/194 (52%), Gaps = 8/194 (4%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T G FV P +A
Sbjct: 34 TDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGRDLGYGFVNYPDPNDA 93
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
DKA+N + K + ++V YA + + L++ LPK +S+ E+ LFS YG
Sbjct: 94 DKAINTLNGLKL---QTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGR 150
Query: 129 IKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL S+G F++++ + +A A++ +NG+ + G++ P+ VK+A+ ++K
Sbjct: 151 IITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQK 209
Query: 186 ERQARRAQKAQSQA 199
QA QS A
Sbjct: 210 TGQALLTHLYQSSA 223
>gi|905387|gb|AAA70417.1| Hel-N2 [Homo sapiens]
Length = 346
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 111/213 (52%), Gaps = 8/213 (3%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ +L ++F ++ +++DK T S G FV ++A
Sbjct: 34 TEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 93
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+KA+N + L + ++V YA + + L++ LPK +++ E+ LFS YG
Sbjct: 94 EKAINTLNG---LRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGR 150
Query: 129 IKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL S+G F++++ + +A A++ +NG+ K G++ P+ VK+A+ ++K
Sbjct: 151 IITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFANNPSQK 209
Query: 186 ERQARRAQKAQSQANNLPNADSQHPSLFGALPM 218
QA +Q QS P +Q F PM
Sbjct: 210 TNQAILSQLYQSPNRRYPGPLAQQAQRFRFSPM 242
>gi|283945529|ref|NP_001164666.1| ELAV-like protein 2 isoform b [Homo sapiens]
gi|283945537|ref|NP_001164668.1| ELAV-like protein 2 isoform b [Homo sapiens]
gi|386781798|ref|NP_001247929.1| ELAV-like protein 2 [Macaca mulatta]
gi|73971067|ref|XP_865045.1| PREDICTED: ELAV-like protein 2 isoform 2 [Canis lupus familiaris]
gi|296190040|ref|XP_002743027.1| PREDICTED: ELAV-like protein 2 isoform 3 [Callithrix jacchus]
gi|296190042|ref|XP_002743028.1| PREDICTED: ELAV-like protein 2 isoform 4 [Callithrix jacchus]
gi|311245697|ref|XP_003121925.1| PREDICTED: ELAV-like protein 2 isoform 2 [Sus scrofa]
gi|332229735|ref|XP_003264043.1| PREDICTED: ELAV-like protein 2 isoform 1 [Nomascus leucogenys]
gi|332229739|ref|XP_003264045.1| PREDICTED: ELAV-like protein 2 isoform 3 [Nomascus leucogenys]
gi|332831658|ref|XP_003312071.1| PREDICTED: ELAV-like protein 2 isoform 1 [Pan troglodytes]
gi|332831662|ref|XP_003312072.1| PREDICTED: ELAV-like protein 2 isoform 2 [Pan troglodytes]
gi|338719470|ref|XP_003364010.1| PREDICTED: ELAV-like protein 2 isoform 2 [Equus caballus]
gi|344271095|ref|XP_003407377.1| PREDICTED: ELAV-like protein 2-like [Loxodonta africana]
gi|402897263|ref|XP_003911688.1| PREDICTED: ELAV-like protein 2 isoform 2 [Papio anubis]
gi|402897265|ref|XP_003911689.1| PREDICTED: ELAV-like protein 2 isoform 3 [Papio anubis]
gi|402897267|ref|XP_003911690.1| PREDICTED: ELAV-like protein 2 isoform 4 [Papio anubis]
gi|403272640|ref|XP_003928160.1| PREDICTED: ELAV-like protein 2 isoform 2 [Saimiri boliviensis
boliviensis]
gi|403272642|ref|XP_003928161.1| PREDICTED: ELAV-like protein 2 isoform 3 [Saimiri boliviensis
boliviensis]
gi|410042502|ref|XP_003951453.1| PREDICTED: ELAV-like protein 2 [Pan troglodytes]
gi|410978370|ref|XP_003995566.1| PREDICTED: ELAV-like protein 2-like isoform 1 [Felis catus]
gi|426220515|ref|XP_004004460.1| PREDICTED: ELAV-like protein 2 isoform 2 [Ovis aries]
gi|426220517|ref|XP_004004461.1| PREDICTED: ELAV-like protein 2 isoform 3 [Ovis aries]
gi|426361463|ref|XP_004047930.1| PREDICTED: ELAV-like protein 2 isoform 2 [Gorilla gorilla gorilla]
gi|426361465|ref|XP_004047931.1| PREDICTED: ELAV-like protein 2 isoform 3 [Gorilla gorilla gorilla]
gi|426361467|ref|XP_004047932.1| PREDICTED: ELAV-like protein 2 isoform 4 [Gorilla gorilla gorilla]
gi|441622584|ref|XP_004088846.1| PREDICTED: ELAV-like protein 2 [Nomascus leucogenys]
gi|21265137|gb|AAH30692.1| ELAVL2 protein [Homo sapiens]
gi|119578985|gb|EAW58581.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_a [Homo sapiens]
gi|119578986|gb|EAW58582.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_a [Homo sapiens]
gi|123981428|gb|ABM82543.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [synthetic construct]
gi|123996267|gb|ABM85735.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [synthetic construct]
gi|157928304|gb|ABW03448.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [synthetic construct]
gi|384945702|gb|AFI36456.1| ELAV-like protein 2 isoform b [Macaca mulatta]
gi|384945704|gb|AFI36457.1| ELAV-like protein 2 isoform b [Macaca mulatta]
gi|387541444|gb|AFJ71349.1| ELAV-like protein 2 isoform b [Macaca mulatta]
Length = 346
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 111/213 (52%), Gaps = 8/213 (3%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ +L ++F ++ +++DK T S G FV ++A
Sbjct: 34 TEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 93
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+KA+N + L + ++V YA + + L++ LPK +++ E+ LFS YG
Sbjct: 94 EKAINTLNG---LRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGR 150
Query: 129 IKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL S+G F++++ + +A A++ +NG+ K G++ P+ VK+A+ ++K
Sbjct: 151 IITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFANNPSQK 209
Query: 186 ERQARRAQKAQSQANNLPNADSQHPSLFGALPM 218
QA +Q QS P +Q F PM
Sbjct: 210 TNQAILSQLYQSPNRRYPGPLAQQAQRFRFSPM 242
>gi|440910150|gb|ELR59976.1| ELAV-like protein 3, partial [Bos grunniens mutus]
Length = 373
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 103/194 (53%), Gaps = 8/194 (4%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV +A
Sbjct: 33 TDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDA 92
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
DKA+N + K + ++V YA + + L++ LPK +S+ E+ LFS YG
Sbjct: 93 DKAINTLNGLKL---QTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGR 149
Query: 129 IKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL S+G F++++ + +A A++ +NG+ + G++ P+ VK+A+ ++K
Sbjct: 150 IITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQK 208
Query: 186 ERQARRAQKAQSQA 199
QA Q QS A
Sbjct: 209 TGQALLTQLYQSSA 222
>gi|224087249|ref|XP_002190976.1| PREDICTED: ELAV-like protein 1-like [Taeniopygia guttata]
gi|449266784|gb|EMC77794.1| ELAV-like protein 1 [Columba livia]
Length = 326
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 97/171 (56%), Gaps = 8/171 (4%)
Query: 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
R L V +P++MT+ +L ++F V+ +I+DK S G FV + ++A++A+
Sbjct: 19 RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAI 78
Query: 74 NACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
N + L S ++V YA E + + L+I LP+++++ +V +FS +G I +
Sbjct: 79 NTLNG---LRLQSKTIKVSYARPSSEVIKDANLYISGLPRSMTQKDVEDMFSRFGRIINS 135
Query: 133 QILRGSQQT--SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
++L Q T S+G AF++++ + +A A+ NG HK GSS P+ VK+A
Sbjct: 136 RVLV-DQTTGLSRGVAFIRFDKRSEAEEAITNFNG-HKPPGSSEPITVKFA 184
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 85/210 (40%), Gaps = 56/210 (26%)
Query: 11 SEERVK---LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQ 67
S E +K L++ +P+ MT+ + MF F + ++ D+TT SRG F+ R
Sbjct: 99 SSEVIKDANLYISGLPRSMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRS 158
Query: 68 EADKAVNACHNKKTLPGASSPLQVKYAD--------GELERLEHK--------------- 104
EA++A+ + K PG+S P+ VK+A L +L H
Sbjct: 159 EAEEAITNFNGHKP-PGSSEPITVKFAANPNQNKNVALLSQLCHSPARRFGGPVHHQAQR 217
Query: 105 ----------------------------LFIGMLPKNVSEAEVSALFSIYGTIKDLQILR 136
+FI L ++ E + +F +G + +++++R
Sbjct: 218 FRFSPMGVDHMSGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIR 277
Query: 137 G-SQQTSKGCAFLKYETKEQALAALEAING 165
+ KG F+ E+A A+ ++NG
Sbjct: 278 DFNTNKCKGFGFVTMTNYEEAAMAIASLNG 307
>gi|449446702|ref|XP_004141110.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore membrane glycoprotein
210-like [Cucumis sativus]
Length = 2257
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 91/188 (48%), Gaps = 22/188 (11%)
Query: 1 MAESKKEKKSSEER--VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGC 58
+ E+ K+ R VK+FVG +P+ T AQ + F ++ + + I+KD+ T RG
Sbjct: 1905 IDETPYYKREGRRRFNVKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGF 1964
Query: 59 CFVICPSRQEADKAVNACH--------NKKTLP-GASSPLQVKYADGELERLEHKLFIGM 109
FV DK + H K+T+P G+SS K K+F+G
Sbjct: 1965 GFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFK---------TKKIFVGG 2015
Query: 110 LPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHK 168
+P +V E E F YG +K+ QI+R S S+G F+ +ET EQA+ L A + +
Sbjct: 2016 IPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFET-EQAVDDLLANGNRLE 2074
Query: 169 MEGSSVPL 176
M GS V +
Sbjct: 2075 MAGSQVEI 2082
>gi|354491613|ref|XP_003507949.1| PREDICTED: ELAV-like protein 2 isoform 2 [Cricetulus griseus]
Length = 360
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 112/219 (51%), Gaps = 11/219 (5%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
K+ + + L V +P++MT+ +L ++F ++ +++DK T S G FV ++
Sbjct: 33 KTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 92
Query: 69 ADKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYG 127
A+KA+N + L + ++V YA + + L++ LPK +++ E+ LFS YG
Sbjct: 93 AEKAINTLNG---LRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYG 149
Query: 128 TIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TE 184
I +IL S+G F++++ + +A A++ +NG K G++ P+ VK+A+ ++
Sbjct: 150 RIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNG-QKPPGATEPITVKFANNPSQ 208
Query: 185 KERQARRAQKAQSQANNLPNADSQHPSLF---GALPMGY 220
K QA +Q QS P +Q F L M Y
Sbjct: 209 KTNQAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAY 247
>gi|119578988|gb|EAW58584.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_c [Homo sapiens]
Length = 360
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 111/213 (52%), Gaps = 8/213 (3%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ +L ++F ++ +++DK T S G FV ++A
Sbjct: 48 TEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 107
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+KA+N + L + ++V YA + + L++ LPK +++ E+ LFS YG
Sbjct: 108 EKAINTLNG---LRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGR 164
Query: 129 IKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL S+G F++++ + +A A++ +NG+ K G++ P+ VK+A+ ++K
Sbjct: 165 IITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFANNPSQK 223
Query: 186 ERQARRAQKAQSQANNLPNADSQHPSLFGALPM 218
QA +Q QS P +Q F PM
Sbjct: 224 TNQAILSQLYQSPNRRYPGPLAQQAQRFRFSPM 256
>gi|297275993|ref|XP_001092907.2| PREDICTED: ELAV-like protein 1 isoform 4 [Macaca mulatta]
Length = 387
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 97/171 (56%), Gaps = 8/171 (4%)
Query: 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
R L V +P++MT+ +L ++F V+ +I+DK S G FV + ++A++A+
Sbjct: 19 RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAI 78
Query: 74 NACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
N + L S ++V YA E + + L+I LP+ +++ +V +FS +G I +
Sbjct: 79 NTLNG---LRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINS 135
Query: 133 QILRGSQQT--SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
++L Q T S+G AF++++ + +A A+ + NG HK GSS P+ VK+A
Sbjct: 136 RVLV-DQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPITVKFA 184
>gi|321464386|gb|EFX75394.1| sex-lethal protein variant 1 [Daphnia pulex]
Length = 263
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 100/180 (55%), Gaps = 9/180 (5%)
Query: 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
R L + +P+++TE++L MF V I++D T S G FV + Q+AD A+
Sbjct: 26 RTNLIINYLPQNLTESELFKMFVTIGTVTNCKIMRDFRTGYSYGFGFV---NYQKADDAI 82
Query: 74 NACHNKKTLPGASSPLQVKYAD--GELERLEHKLFIGMLP-KNVSEAEVSALFSIYGTIK 130
A L + ++V YA GE +R E L++ LP ++V+E E++ +FS +G I
Sbjct: 83 RAIQTLNGLQIQNKRIKVSYARPPGE-DRKETNLYVTNLPSRDVTEDELTNIFSAHGNIV 141
Query: 131 DLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
+ +L+ +G AF++++ +E+ALAA+E +NG G + P+ VK A+ +++A
Sbjct: 142 QMNLLKDKITGMPRGVAFVRFDKREEALAAIEHLNGTIP-HGRTNPISVKIAEEHGKQKA 200
>gi|354491611|ref|XP_003507948.1| PREDICTED: ELAV-like protein 2 isoform 1 [Cricetulus griseus]
Length = 359
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 113/219 (51%), Gaps = 11/219 (5%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
K+ + + L V +P++MT+ +L ++F ++ +++DK T S G FV ++
Sbjct: 33 KTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 92
Query: 69 ADKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYG 127
A+KA+N + L + ++V YA + + L++ LPK +++ E+ LFS YG
Sbjct: 93 AEKAINTLNG---LRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYG 149
Query: 128 TIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TE 184
I +IL S+G F++++ + +A A++ +NG+ K G++ P+ VK+A+ ++
Sbjct: 150 RIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ-KPPGATEPITVKFANNPSQ 208
Query: 185 KERQARRAQKAQSQANNLPNADSQHPSLF---GALPMGY 220
K QA +Q QS P +Q F L M Y
Sbjct: 209 KTNQAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAY 247
>gi|344248615|gb|EGW04719.1| ELAV-like protein 2 [Cricetulus griseus]
Length = 347
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 109/209 (52%), Gaps = 8/209 (3%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
K+ + + L V +P++MT+ +L ++F ++ +++DK T S G FV ++
Sbjct: 33 KTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 92
Query: 69 ADKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYG 127
A+KA+N + L + ++V YA + + L++ LPK +++ E+ LFS YG
Sbjct: 93 AEKAINTLNG---LRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYG 149
Query: 128 TIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TE 184
I +IL S+G F++++ + +A A++ +NG K G++ P+ VK+A+ ++
Sbjct: 150 RIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNG-QKPPGATEPITVKFANNPSQ 208
Query: 185 KERQARRAQKAQSQANNLPNADSQHPSLF 213
K QA +Q QS P +Q F
Sbjct: 209 KTNQAILSQLYQSPNRRYPGPLAQQAQRF 237
>gi|297275217|ref|XP_001082711.2| PREDICTED: CUGBP Elav-like family member 4-like [Macaca mulatta]
Length = 173
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 57/85 (67%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A KA
Sbjct: 52 DAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKA 111
Query: 73 VNACHNKKTLPGASSPLQVKYADGE 97
+A H +KTLPG + P+QVK AD E
Sbjct: 112 QSALHEQKTLPGMNRPIQVKPADSE 136
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEA 162
KLFIG +P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 114
Query: 163 INGKHKMEGSSVPLVVKWADTE 184
++ + + G + P+ VK AD+E
Sbjct: 115 LHEQKTLPGMNRPIQVKPADSE 136
>gi|148693298|gb|EDL25245.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C), isoform CRA_b [Mus musculus]
Length = 250
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 103/194 (53%), Gaps = 8/194 (4%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV +A
Sbjct: 33 TDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDA 92
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
DKA+N + K + ++V YA + + L++ LPK +S+ E+ LFS YG
Sbjct: 93 DKAINTLNGLKL---QTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGR 149
Query: 129 IKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL + S+G F++++ + +A A++ +NG+ + G++ P+ VK+A+ ++K
Sbjct: 150 IITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQK 208
Query: 186 ERQARRAQKAQSQA 199
QA QS A
Sbjct: 209 TGQALLTHLYQSSA 222
>gi|149020435|gb|EDL78240.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C), isoform CRA_a [Rattus norvegicus]
Length = 251
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 103/194 (53%), Gaps = 8/194 (4%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV +A
Sbjct: 34 TDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDA 93
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
DKA+N + K + ++V YA + + L++ LPK +S+ E+ LFS YG
Sbjct: 94 DKAINTLNGLKL---QTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGR 150
Query: 129 IKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL + S+G F++++ + +A A++ +NG+ + G++ P+ VK+A+ ++K
Sbjct: 151 IITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQK 209
Query: 186 ERQARRAQKAQSQA 199
QA QS A
Sbjct: 210 TGQALLTHLYQSSA 223
>gi|14585790|gb|AAK67714.1| HUC [Homo sapiens]
Length = 360
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 102/194 (52%), Gaps = 8/194 (4%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T G FV P +A
Sbjct: 34 TDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGRDLGYGFVNYPDPNDA 93
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
DKA+N + K + ++V YA + + L++ LPK +S+ E+ LFS YG
Sbjct: 94 DKAINTLNGLKL---QTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGR 150
Query: 129 IKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL S+G F++++ + +A A++ +NG+ + G++ P+ VK+A+ ++K
Sbjct: 151 IITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQK 209
Query: 186 ERQARRAQKAQSQA 199
QA QS A
Sbjct: 210 TGQALLTHLYQSSA 223
>gi|296222553|ref|XP_002757248.1| PREDICTED: CUGBP Elav-like family member 4-like [Callithrix
jacchus]
Length = 151
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 57/85 (67%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ +KLF+GQ+P+++ E L +F+EF + E+ ++KD+ T +GC F+ R+ A KA
Sbjct: 52 DAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKA 111
Query: 73 VNACHNKKTLPGASSPLQVKYADGE 97
+A H +KTLPG + P+QVK AD E
Sbjct: 112 QSALHEQKTLPGMNRPIQVKPADSE 136
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEA 162
KLFIG +P+N+ E ++ LF +G I +L +L+ KGCAFL Y +E AL A A
Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 114
Query: 163 INGKHKMEGSSVPLVVKWADTE 184
++ + + G + P+ VK AD+E
Sbjct: 115 LHEQKTLPGMNRPIQVKPADSE 136
>gi|426229023|ref|XP_004008593.1| PREDICTED: ELAV-like protein 3 isoform 1 [Ovis aries]
Length = 359
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 103/194 (53%), Gaps = 8/194 (4%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV +A
Sbjct: 33 TDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDA 92
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
DKA+N + K + ++V YA + + L++ LPK +S+ E+ LFS YG
Sbjct: 93 DKAINTLNGLKL---QTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGR 149
Query: 129 IKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL S+G F++++ + +A A++ +NG+ + G++ P+ VK+A+ ++K
Sbjct: 150 IITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQK 208
Query: 186 ERQARRAQKAQSQA 199
QA Q QS A
Sbjct: 209 TGQALLTQLYQSSA 222
>gi|290985168|ref|XP_002675298.1| hypothetical protein NAEGRDRAFT_80404 [Naegleria gruberi]
gi|284088893|gb|EFC42554.1| hypothetical protein NAEGRDRAFT_80404 [Naegleria gruberi]
Length = 641
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 98/186 (52%), Gaps = 7/186 (3%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR-ASRGCCFVICPSRQEADKAVNA 75
+FV +P H ++ L +F F + +++ DKT +S G FV + EA A+
Sbjct: 124 VFVKYLPPHFSDEDLRELFTPFGEIVSCHVMTDKTRENSSLGFGFVRFSNENEAQDAIQG 183
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEH-KLFIGMLPKNVSEAEVSALFSIYGTIKDLQI 134
N+K++ ++ + G E+ + LFI +P + E + F ++G I ++I
Sbjct: 184 L-NEKSIGNKRLLCKLSNSAGNKEKDQQSNLFIRNIPPHYDEETLKQAFEVFGPISKVKI 242
Query: 135 LRG-SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSS---VPLVVKWADTEKERQAR 190
+ + Q SK F K+E ++ AL+A++ +NG + SS +PLVV++A+TE E+Q R
Sbjct: 243 MIDINTQRSKCYGFCKFENRKDALSAIQKMNGSKLDDDSSKDILPLVVRFAETEHEKQKR 302
Query: 191 RAQKAQ 196
+ + Q
Sbjct: 303 KLKTRQ 308
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 76 CHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEAEVSALFSIYGTIKDLQIL 135
H K++ +SSP GE L FI LP +V ++++ LFS +G I+ ++++
Sbjct: 453 THTKRSKNESSSPEDKNSKSGETANL----FIFHLPGDVDDSKLMELFSKFGEIESVKVI 508
Query: 136 RGSQQT-SKGCAFLKYETKEQALAALEAING 165
R + SKG F+KY + A+ A+ +N
Sbjct: 509 RDPKTNLSKGYGFVKYCNIDSAMEAVSKMNS 539
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
K +++ LF+ +P H E L F+ F + +V I+ D T+ S+ F +R++
Sbjct: 205 KEKDQQSNLFIRNIPPHYDEETLKQAFEVFGPISKVKIMIDINTQRSKCYGFCKFENRKD 264
Query: 69 ADKAVNACHNKKTLPGASS---PLQVKYADGELERLEHKL 105
A A+ + K +S PL V++A+ E E+ + KL
Sbjct: 265 ALSAIQKMNGSKLDDDSSKDILPLVVRFAETEHEKQKRKL 304
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 7 EKKSSE--ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFV 61
E K+S+ E LF+ +P + +++L+ +F +F ++ V +I+D T S+G FV
Sbjct: 466 EDKNSKSGETANLFIFHLPGDVDDSKLMELFSKFGEIESVKVIRDPKTNLSKGYGFV 522
>gi|194758473|ref|XP_001961486.1| GF14992 [Drosophila ananassae]
gi|190615183|gb|EDV30707.1| GF14992 [Drosophila ananassae]
Length = 660
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 99/176 (56%), Gaps = 11/176 (6%)
Query: 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
+ L V +P+ M++ ++ ++F F V+ +I+DK T S G FV +++A+KA+
Sbjct: 97 KTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAI 156
Query: 74 NACHNKKTLPGASSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
NA + L + ++V A E ++ L++ LPKN++++++ +LFS YG I
Sbjct: 157 NALNG---LRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITS 213
Query: 133 QIL------RGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182
+IL +Q SKG F++++ + +A A++ +NG + S+ P+ VK+A+
Sbjct: 214 RILCDNITDEHAQGLSKGVGFIRFDQRFEADRAIKELNGT-TPKNSTEPITVKFAN 268
>gi|45382283|ref|NP_990164.1| ELAV-like protein 1 [Gallus gallus]
gi|5738249|gb|AAD50313.1|AF176673_1 RNA-binding protein HuA [Gallus gallus]
Length = 326
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 97/171 (56%), Gaps = 8/171 (4%)
Query: 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
R L V +P++MT+ +L ++F V+ +I+DK S G FV + ++A++A+
Sbjct: 19 RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAI 78
Query: 74 NACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
N + L S ++V YA E + + L+I LP+++++ +V +FS +G I +
Sbjct: 79 NTLNG---LRLQSKTIKVSYARPSSEVIKDANLYISGLPRSMTQKDVVDMFSRFGRIINS 135
Query: 133 QILRGSQQT--SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
++L Q T S+G AF++++ + +A A+ NG HK GSS P+ VK+A
Sbjct: 136 RVLV-DQTTGLSRGVAFIRFDKRSEAEEAITNFNG-HKPPGSSEPITVKFA 184
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 86/210 (40%), Gaps = 56/210 (26%)
Query: 11 SEERVK---LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQ 67
S E +K L++ +P+ MT+ ++ MF F + ++ D+TT SRG F+ R
Sbjct: 99 SSEVIKDANLYISGLPRSMTQKDVVDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRS 158
Query: 68 EADKAVNACHNKKTLPGASSPLQVKYAD--------GELERLEHK--------------- 104
EA++A+ + K PG+S P+ VK+A L +L H
Sbjct: 159 EAEEAITNFNGHKP-PGSSEPITVKFAANPNQNKNVALLSQLCHSPARRFGGPVHHQAQR 217
Query: 105 ----------------------------LFIGMLPKNVSEAEVSALFSIYGTIKDLQILR 136
+FI L ++ E + +F +G + +++++R
Sbjct: 218 FRFSPMGVDHMSGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIR 277
Query: 137 G-SQQTSKGCAFLKYETKEQALAALEAING 165
+ KG F+ E+A A+ ++NG
Sbjct: 278 DFNTNKCKGFGFVTMTNYEEAAMAIASLNG 307
>gi|74138233|dbj|BAE28602.1| unnamed protein product [Mus musculus]
Length = 326
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 97/171 (56%), Gaps = 8/171 (4%)
Query: 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
R L V +P++MT+ +L ++F V+ +I+DK S G FV + ++A++A+
Sbjct: 19 RTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAI 78
Query: 74 NACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+ + L S ++V YA E + + L+I LP+ +++ +V +FS +G I +
Sbjct: 79 STLNG---LRLQSKTIKVSYAHPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINS 135
Query: 133 QILRGSQQT--SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
++L Q T S+G AF++++ + +A A+ + NG HK GSS P+ VK+A
Sbjct: 136 RVLV-DQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPITVKFA 184
>gi|355755476|gb|EHH59223.1| Hu-antigen C, partial [Macaca fascicularis]
Length = 237
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 102/194 (52%), Gaps = 8/194 (4%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV +A
Sbjct: 33 TDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDA 92
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
DKA+N + K + ++V YA + + L++ LPK +S+ E+ LFS YG
Sbjct: 93 DKAINTLNGLKL---QTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGR 149
Query: 129 IKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL S+G F++++ + +A A++ +NG+ + G++ P+ VK+A+ ++K
Sbjct: 150 IITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQK 208
Query: 186 ERQARRAQKAQSQA 199
QA QS A
Sbjct: 209 TGQALLTHLYQSSA 222
>gi|26330019|dbj|BAC28748.1| unnamed protein product [Mus musculus]
Length = 326
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 97/171 (56%), Gaps = 8/171 (4%)
Query: 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
R L V +P++MT+ +L ++F V+ +I+DK S G FV + ++A++A+
Sbjct: 19 RTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAI 78
Query: 74 NACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+ + L S ++V YA E + + L+I LP+ +++ +V +FS +G I +
Sbjct: 79 STLNG---LRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINS 135
Query: 133 QILRGSQQT--SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
++L Q T S+G AF++++ + +A A+ + NG HK GSS P+ VK+A
Sbjct: 136 RVLV-DQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPITVKFA 184
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 82/201 (40%), Gaps = 53/201 (26%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 76
L++ +P+ MT+ + MF F + ++ D+TT SRG F+ R EA++A+ +
Sbjct: 108 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 167
Query: 77 HNKKTLPGASSPLQVKYAD--------GELERLEHK------------------------ 104
+ K PG+S P+ VK+A L +L H
Sbjct: 168 NGHKP-PGSSEPITVKFAANPNQNKNMALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVD 226
Query: 105 -------------------LFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKG 144
+FI L ++ E + +F +G + +++++R + KG
Sbjct: 227 HMSGISGVNVPGNASSGWCIFIYNLGQDADEGILWRMFGPFGAVTNVKVIRDFNTNKCKG 286
Query: 145 CAFLKYETKEQALAALEAING 165
F+ E+A A+ ++NG
Sbjct: 287 FGFVTMTNYEEAAMAIASLNG 307
>gi|338224497|gb|AEI88122.1| hypothetical protein [Scylla paramamosain]
Length = 166
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 63/93 (67%)
Query: 115 SEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSV 174
SE +V +FS +GTI++ +LR + SKGCAF+ + T++ A+ A++ ++ MEG S
Sbjct: 2 SEQDVRVMFSSHGTIEECTVLRDNNGQSKGCAFVTFSTRQCAINAIKKMHHSQTMEGCSS 61
Query: 175 PLVVKWADTEKERQARRAQKAQSQANNLPNADS 207
PLVVK+ADT+KE+ A+R Q+ N+ +A++
Sbjct: 62 PLVVKFADTQKEKDAKRLQQVTQNLWNVASANN 94
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 27 TEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGAS 86
+E + MF ++E +++D + S+GC FV +RQ A A+ H+ +T+ G S
Sbjct: 2 SEQDVRVMFSSHGTIEECTVLRDNNGQ-SKGCAFVTFSTRQCAINAIKKMHHSQTMEGCS 60
Query: 87 SPLQVKYADGELERLEHKL 105
SPL VK+AD + E+ +L
Sbjct: 61 SPLVVKFADTQKEKDAKRL 79
>gi|109123517|ref|XP_001107360.1| PREDICTED: ELAV-like protein 3-like [Macaca mulatta]
gi|296232958|ref|XP_002761808.1| PREDICTED: ELAV-like protein 3 [Callithrix jacchus]
Length = 251
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 102/194 (52%), Gaps = 8/194 (4%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV +A
Sbjct: 34 TDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDA 93
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
DKA+N + K + ++V YA + + L++ LPK +S+ E+ LFS YG
Sbjct: 94 DKAINTLNGLKL---QTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGR 150
Query: 129 IKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL S+G F++++ + +A A++ +NG+ + G++ P+ VK+A+ ++K
Sbjct: 151 IITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQK 209
Query: 186 ERQARRAQKAQSQA 199
QA QS A
Sbjct: 210 TGQALLTHLYQSSA 223
>gi|31542602|ref|NP_034615.2| ELAV-like protein 1 [Mus musculus]
gi|157818153|ref|NP_001102318.1| ELAV-like protein 1 [Rattus norvegicus]
gi|354488231|ref|XP_003506274.1| PREDICTED: ELAV-like protein 1 [Cricetulus griseus]
gi|341940489|sp|P70372.2|ELAV1_MOUSE RecName: Full=ELAV-like protein 1; AltName: Full=Elav-like generic
protein; AltName: Full=Hu-antigen R; Short=HuR; AltName:
Full=MelG
gi|26348505|dbj|BAC37892.1| unnamed protein product [Mus musculus]
gi|83308037|emb|CAI77902.1| HuR RNA binding protein [Spalax judaei]
gi|148690049|gb|EDL21996.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R), isoform CRA_a [Mus musculus]
gi|148690050|gb|EDL21997.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R), isoform CRA_a [Mus musculus]
gi|149015619|gb|EDL75000.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149015620|gb|EDL75001.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) (predicted), isoform CRA_a [Rattus
norvegicus]
gi|197245826|gb|AAI68972.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [Rattus norvegicus]
gi|208609536|dbj|BAG72208.1| HuR [Rattus norvegicus]
Length = 326
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 97/171 (56%), Gaps = 8/171 (4%)
Query: 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
R L V +P++MT+ +L ++F V+ +I+DK S G FV + ++A++A+
Sbjct: 19 RTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAI 78
Query: 74 NACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+ + L S ++V YA E + + L+I LP+ +++ +V +FS +G I +
Sbjct: 79 STLNG---LRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINS 135
Query: 133 QILRGSQQT--SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
++L Q T S+G AF++++ + +A A+ + NG HK GSS P+ VK+A
Sbjct: 136 RVLV-DQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPITVKFA 184
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 82/201 (40%), Gaps = 53/201 (26%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 76
L++ +P+ MT+ + MF F + ++ D+TT SRG F+ R EA++A+ +
Sbjct: 108 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 167
Query: 77 HNKKTLPGASSPLQVKYAD--------GELERLEHK------------------------ 104
+ K PG+S P+ VK+A L +L H
Sbjct: 168 NGHKP-PGSSEPITVKFAANPNQNKNMALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVD 226
Query: 105 -------------------LFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKG 144
+FI L ++ E + +F +G + +++++R + KG
Sbjct: 227 HMSGISGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKG 286
Query: 145 CAFLKYETKEQALAALEAING 165
F+ E+A A+ ++NG
Sbjct: 287 FGFVTMTNYEEAAMAIASLNG 307
>gi|350580111|ref|XP_003480751.1| PREDICTED: CUGBP Elav-like family member 1-like [Sus scrofa]
Length = 145
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 2/87 (2%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTR--ASRGCCFVICPSRQEAD 70
+ +K+FVGQVP+ +E L +F+++ V E+N+++D++ S+GCCFV +R+ A
Sbjct: 14 DAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAAL 73
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGE 97
+A NA HN K LPG P+Q+K AD E
Sbjct: 74 EAQNALHNMKVLPGMHHPIQMKPADSE 100
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Query: 104 KLFIGMLPKNVSEAEVSALFSIYGTIKDLQILRGSQQT---SKGCAFLKYETKEQALAAL 160
K+F+G +P+ SE ++ LF YG + ++ +LR Q SKGC F+ + T++ AL A
Sbjct: 17 KMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQ 76
Query: 161 EAINGKHKMEGSSVPLVVKWADTEK 185
A++ + G P+ +K AD+EK
Sbjct: 77 NALHNMKVLPGMHHPIQMKPADSEK 101
>gi|26344670|dbj|BAC35984.1| unnamed protein product [Mus musculus]
Length = 326
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 97/171 (56%), Gaps = 8/171 (4%)
Query: 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
R L V +P++MT+ +L ++F V+ +I+DK S G FV + ++A++A+
Sbjct: 19 RTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAI 78
Query: 74 NACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+ + L S ++V YA E + + L+I LP+ +++ +V +FS +G I +
Sbjct: 79 STLNG---LRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINS 135
Query: 133 QILRGSQQT--SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
++L Q T S+G AF++++ + +A A+ + NG HK GSS P+ VK+A
Sbjct: 136 RVLV-DQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPITVKFA 184
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 82/201 (40%), Gaps = 53/201 (26%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 76
L++ +P+ MT+ + MF F + ++ D+TT SRG F+ R EA++A+ +
Sbjct: 108 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 167
Query: 77 HNKKTLPGASSPLQVKYAD--------GELERLEHK------------------------ 104
+ K PG+S P+ VK+A L +L H
Sbjct: 168 NGHKP-PGSSEPITVKFAANPNQNKNMALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVD 226
Query: 105 -------------------LFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSKG 144
+FI L ++ E + +F +G + +++++R + KG
Sbjct: 227 HMSGISGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKG 286
Query: 145 CAFLKYETKEQALAALEAING 165
F+ E+A A+ ++NG
Sbjct: 287 FGFVTMTNYEEAAMAIASLNG 307
>gi|395512536|ref|XP_003775304.1| PREDICTED: LOW QUALITY PROTEIN: ELAV-like protein 3 [Sarcophilus
harrisii]
Length = 287
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 102/194 (52%), Gaps = 8/194 (4%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV +A
Sbjct: 36 TDDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDA 95
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
DKA+N + K + ++V YA + + L++ LPK +S+ E+ LFS YG
Sbjct: 96 DKAINTLNGLKL---QTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGR 152
Query: 129 IKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL S+G F++++ + +A A++ +NG+ + G+S P+ VK+A+ ++K
Sbjct: 153 IITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GASEPITVKFANNPSQK 211
Query: 186 ERQARRAQKAQSQA 199
QA QS A
Sbjct: 212 TGQALLTHLYQSSA 225
>gi|117647212|ref|NP_001071119.1| ELAV-like protein 4 [Rattus norvegicus]
gi|2500581|sp|O09032.1|ELAV4_RAT RecName: Full=ELAV-like protein 4; AltName: Full=Hu-antigen D;
Short=HuD; AltName: Full=Paraneoplastic
encephalomyelitis antigen HuD
gi|1911579|gb|AAB50733.1| HuD [Rattus sp.]
gi|165970854|gb|AAI58559.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D) [Rattus norvegicus]
Length = 373
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 112/218 (51%), Gaps = 11/218 (5%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV ++A
Sbjct: 34 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 93
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+KA+N + + + ++V YA + + L++ LPK +++ E+ LFS YG
Sbjct: 94 EKAINTLNGLRL---QTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGR 150
Query: 129 IKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL S+G F++++ + +A A++ +NG+ K G++ P+ VK+A+ ++K
Sbjct: 151 IITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFANNPSQK 209
Query: 186 ERQARRAQKAQSQANNLP---NADSQHPSLFGALPMGY 220
QA +Q QS P + +Q L L M Y
Sbjct: 210 SSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAY 247
>gi|149693657|ref|XP_001492578.1| PREDICTED: ELAV-like protein 4 isoform 4 [Equus caballus]
Length = 380
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 112/218 (51%), Gaps = 11/218 (5%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV ++A
Sbjct: 41 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 100
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+KA+N + + + ++V YA + + L++ LPK +++ E+ LFS YG
Sbjct: 101 EKAINTLNGLRL---QTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGR 157
Query: 129 IKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL S+G F++++ + +A A++ +NG+ K G++ P+ VK+A+ ++K
Sbjct: 158 IITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFANNPSQK 216
Query: 186 ERQARRAQKAQSQANNLP---NADSQHPSLFGALPMGY 220
QA +Q QS P + +Q L L M Y
Sbjct: 217 SSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAY 254
>gi|345479148|ref|XP_003423887.1| PREDICTED: sex-lethal homolog isoform 3 [Nasonia vitripennis]
Length = 376
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 96/181 (53%), Gaps = 6/181 (3%)
Query: 11 SEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEAD 70
+++R L + +P+ MTE +L +MF V+ ++KD T S G FV ++A
Sbjct: 78 NDDRTNLIINYLPQSMTEKELYSMFVTIGPVESCRVMKDYKTGYSYGFGFVNYTKAEDAL 137
Query: 71 KAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGTI 129
A+N + L + L+V +A E + E L++ LP+N++E +V +FS +G I
Sbjct: 138 TAINTLNG---LQVQNKRLKVSFARPSGEEIKETNLYVTNLPRNITEKQVEEIFSKFGQI 194
Query: 130 KDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQ 188
IL+ +G AF++Y+ +E+A A+ ++G EG S PL VK A+ +++
Sbjct: 195 VQKNILKDKLTGLPRGVAFVRYDKREEAQDAINQLHGTIP-EGGSEPLSVKIAEEHGKQK 253
Query: 189 A 189
A
Sbjct: 254 A 254
>gi|542846|pir||JC2116 hippocampal 38K autoantigen protein - human
gi|2340828|dbj|BAA21838.1| PLE21 protein [Homo sapiens]
Length = 350
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 109/219 (49%), Gaps = 11/219 (5%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV +A
Sbjct: 25 TDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDA 84
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
DKA+N + K + ++V YA + + L++ LPK +S+ E+ LFS YG
Sbjct: 85 DKAINTLNGLKL---QTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGR 141
Query: 129 IKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL S+G F++++ + +A A++ +NG+ + G+ P+ VK+A+ ++K
Sbjct: 142 IITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAREPITVKFANNPSQK 200
Query: 186 ERQARRAQKAQSQANNLP---NADSQHPSLFGALPMGYA 221
QA QS A + +Q L L M YA
Sbjct: 201 TGQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYA 239
>gi|387196968|gb|AFJ68786.1| elav-like protein 2, partial [Nannochloropsis gaditana CCMP526]
Length = 358
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 96/180 (53%), Gaps = 6/180 (3%)
Query: 9 KSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQE 68
+ + +R L V +P + + L +F++F V+ +I++K + S G FV Q
Sbjct: 110 EGATDRTNLIVNYLPNEIDDMGLRELFQDFGQVESARVIREKGSGRSLGYGFVKYKDPQS 169
Query: 69 ADKAVNACHNKKTLPGASSPLQVKYADGELERLEH-KLFIGMLPKNVSEAEVSALFSIYG 127
AD A+ N + G ++V A E +H KL++ LP + ++AEV LF+ +G
Sbjct: 170 ADSAI-LTRNGHQVYGKR--IKVSVARPASEEHKHTKLYVANLPHHFTKAEVIQLFAPHG 226
Query: 128 TIKDLQIL-RGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKE 186
I + ++L + +G AF++Y T+++A AA+ +++ MEG PL+VK AD + +
Sbjct: 227 RIIECRLLMEANSGRFRGIAFVQYNTRQEAAAAIRSLH-DTPMEGVPRPLIVKLADDKGD 285
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 8 KKSSEER--VKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPS 65
+ +SEE KL+V +P H T+A+++ +F + E ++ + + RG FV +
Sbjct: 193 RPASEEHKHTKLYVANLPHHFTKAEVIQLFAPHGRIIECRLLMEANSGRFRGIAFVQYNT 252
Query: 66 RQEADKAVNACHNKKTLPGASSPLQVKYAD 95
RQEA A+ + H+ + G PL VK AD
Sbjct: 253 RQEAAAAIRSLHDTP-MEGVPRPLIVKLAD 281
>gi|432856226|ref|XP_004068415.1| PREDICTED: ELAV-like protein 4-like [Oryzias latipes]
Length = 439
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 114/219 (52%), Gaps = 13/219 (5%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV ++A
Sbjct: 113 NDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 172
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+KA+N + + + ++V YA + + L++ LPK +++ E+ LFS YG
Sbjct: 173 EKAINTLNGLRL---QTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGR 229
Query: 129 IKDLQILRGSQQT--SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TE 184
I +IL Q T S+G F++++ + +A A++ +NG+ K G++ P+ VK+A+ ++
Sbjct: 230 IITSRILV-DQVTGGSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGAAEPITVKFANNPSQ 287
Query: 185 KERQARRAQKAQSQANNLP---NADSQHPSLFGALPMGY 220
K QA +Q QS P + +Q L L M Y
Sbjct: 288 KTSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAY 326
>gi|281347138|gb|EFB22722.1| hypothetical protein PANDA_010481 [Ailuropoda melanoleuca]
Length = 377
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 112/218 (51%), Gaps = 11/218 (5%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV ++A
Sbjct: 38 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 97
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+KA+N + + + ++V YA + + L++ LPK +++ E+ LFS YG
Sbjct: 98 EKAINTLNGLRL---QTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGR 154
Query: 129 IKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL S+G F++++ + +A A++ +NG+ K G++ P+ VK+A+ ++K
Sbjct: 155 IITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFANNPSQK 213
Query: 186 ERQARRAQKAQSQANNLP---NADSQHPSLFGALPMGY 220
QA +Q QS P + +Q L L M Y
Sbjct: 214 SSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAY 251
>gi|297664977|ref|XP_002810889.1| PREDICTED: ELAV-like protein 4 isoform 2 [Pongo abelii]
Length = 380
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 112/218 (51%), Gaps = 11/218 (5%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV ++A
Sbjct: 41 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 100
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+KA+N + L + ++V YA + + L++ LPK +++ E+ LFS YG
Sbjct: 101 EKAINTLNG---LRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGR 157
Query: 129 IKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL S+G F++++ + +A A++ +NG+ K G++ P+ VK+A+ ++K
Sbjct: 158 IITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFANNPSQK 216
Query: 186 ERQARRAQKAQSQANNLP---NADSQHPSLFGALPMGY 220
QA +Q QS P + +Q L L M Y
Sbjct: 217 SSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAY 254
>gi|405963075|gb|EKC28679.1| ELAV-like protein 2 [Crassostrea gigas]
Length = 502
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 101/197 (51%), Gaps = 7/197 (3%)
Query: 6 KEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPS 65
K + S+ L V +P+ +++ +F++ + I++DK T S G FV +
Sbjct: 182 KRRNMSDPNTNLIVNYLPQTLSDEDFKELFEKIGPLKSYKIVRDKATNYSYGFGFVDYVN 241
Query: 66 RQEADKAVNACHNKKTLPGASSPLQVKYA-DGELERLEHKLFIGMLPKNVSEAEVSALFS 124
++A++A++ + +K ++V YA + E ++I +P++ E E+ A F
Sbjct: 242 EEDAERAIHEMNGQKM---DHKTIKVSYARKNDSESKGANIYIANIPRSFGEEELGAHFR 298
Query: 125 IYGTIKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADT 183
+G I +++LR S SKG F+ Y + +A AALEA+NGK ++G L +K+AD
Sbjct: 299 QFGEIIQVRLLRDKSTNESKGVGFVYYTKRSEAAAALEAMNGKTLLKGYPA-LSIKFADI 357
Query: 184 EKERQARRAQKAQSQAN 200
R+ R + Q Q N
Sbjct: 358 NA-RKGRAPYQIQVQTN 373
>gi|89885655|dbj|BAE86938.1| sex-lethal [Bombyx mori]
Length = 336
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 93/178 (52%), Gaps = 6/178 (3%)
Query: 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
R L V +P+++TE L AMF ++ ++KD T S G FV ++A +A+
Sbjct: 62 RTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAI 121
Query: 74 NACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+ + + + L+V YA + + E L++ LP+ +++ ++ +F YG I
Sbjct: 122 DTFNGYQL---RNKRLKVSYARPSGDDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQK 178
Query: 133 QILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
ILR T +G AF++Y+ +E+A A+ A+N EG + PL VK A+ +++A
Sbjct: 179 HILRDKNSGTPRGVAFVRYDKREEAQEAIAALNNVIP-EGGTEPLSVKVAEEHGKQKA 235
>gi|24583879|ref|NP_723740.1| arrest, isoform D [Drosophila melanogaster]
gi|17946480|gb|AAL49272.1| RE72594p [Drosophila melanogaster]
gi|22946321|gb|AAN10813.1| arrest, isoform D [Drosophila melanogaster]
gi|220948776|gb|ACL86931.1| aret-PD [synthetic construct]
Length = 361
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 109 MLPKNVSEAEVSALFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHK 168
ML K ++E +V LF ++G I++ +LR SKGCAF+ + TK A++A++ ++K
Sbjct: 1 MLNKKLNENDVRKLFEVHGAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLSQNK 60
Query: 169 -MEGSSVPLVVKWADTEKERQARRAQKAQSQANNL 202
MEG + PLVVK+ADT+KE++ ++ Q+ Q+ NL
Sbjct: 61 IMEGCTSPLVVKFADTQKEKEQKKIQQIQANLWNL 95
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 24 KHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNACHNK-KTL 82
K + E + +F+ ++E +++D+ + S+GC FV ++ A A+ ++ K +
Sbjct: 4 KKLNENDVRKLFEVHGAIEECTVLRDQNGQ-SKGCAFVTFATKHAAISAIKVTLSQNKIM 62
Query: 83 PGASSPLQVKYADGELERLEHKL 105
G +SPL VK+AD + E+ + K+
Sbjct: 63 EGCTSPLVVKFADTQKEKEQKKI 85
>gi|390465926|ref|XP_003733492.1| PREDICTED: ELAV-like protein 4 isoform 5 [Callithrix jacchus]
gi|403258123|ref|XP_003921628.1| PREDICTED: ELAV-like protein 4 isoform 4 [Saimiri boliviensis
boliviensis]
Length = 380
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 112/218 (51%), Gaps = 11/218 (5%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV ++A
Sbjct: 41 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 100
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+KA+N + + + ++V YA + + L++ LPK +++ E+ LFS YG
Sbjct: 101 EKAINTLNGLRL---QTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGR 157
Query: 129 IKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL S+G F++++ + +A A++ +NG+ K G++ P+ VK+A+ ++K
Sbjct: 158 IITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFANNPSQK 216
Query: 186 ERQARRAQKAQSQANNLP---NADSQHPSLFGALPMGY 220
QA +Q QS P + +Q L L M Y
Sbjct: 217 SSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAY 254
>gi|388604324|pdb|4EGL|A Chain A, Crystal Structure Of Two Tandem Rna Recognition Motifs Of
Human Antigen R
Length = 177
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 96/171 (56%), Gaps = 8/171 (4%)
Query: 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
R L V +P++MT+ +L ++F V+ +I+DK S G FV + ++A++A+
Sbjct: 2 RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAI 61
Query: 74 NACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
N + L S ++V YA E + + L+I LP+ +++ +V +FS +G I +
Sbjct: 62 NTLNG---LRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINS 118
Query: 133 QILRGSQQT--SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWA 181
++L Q T S+G AF++++ + +A A+ + NG HK GSS P+ V +A
Sbjct: 119 RVL-VDQTTGLSRGVAFIRFDKRSEAEEAITSFNG-HKPPGSSEPITVXFA 167
>gi|221316765|ref|NP_068771.2| ELAV-like protein 4 isoform 1 [Homo sapiens]
gi|114556466|ref|XP_001134946.1| PREDICTED: ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 isoform 2 [Pan troglodytes]
gi|332219811|ref|XP_003259051.1| PREDICTED: ELAV-like protein 4 isoform 6 [Nomascus leucogenys]
gi|395855045|ref|XP_003799982.1| PREDICTED: ELAV-like protein 4 isoform 5 [Otolemur garnettii]
gi|397518912|ref|XP_003829619.1| PREDICTED: ELAV-like protein 4 isoform 6 [Pan paniscus]
gi|402854513|ref|XP_003891912.1| PREDICTED: ELAV-like protein 4 isoform 6 [Papio anubis]
gi|426329583|ref|XP_004025818.1| PREDICTED: ELAV-like protein 4 isoform 6 [Gorilla gorilla gorilla]
gi|223590202|sp|P26378.2|ELAV4_HUMAN RecName: Full=ELAV-like protein 4; AltName: Full=Hu-antigen D;
Short=HuD; AltName: Full=Paraneoplastic
encephalomyelitis antigen HuD
gi|380810344|gb|AFE77047.1| ELAV-like protein 4 isoform 1 [Macaca mulatta]
Length = 380
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 112/218 (51%), Gaps = 11/218 (5%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV ++A
Sbjct: 41 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 100
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+KA+N + + + ++V YA + + L++ LPK +++ E+ LFS YG
Sbjct: 101 EKAINTLNGLRL---QTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGR 157
Query: 129 IKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL S+G F++++ + +A A++ +NG+ K G++ P+ VK+A+ ++K
Sbjct: 158 IITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFANNPSQK 216
Query: 186 ERQARRAQKAQSQANNLP---NADSQHPSLFGALPMGY 220
QA +Q QS P + +Q L L M Y
Sbjct: 217 SSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAY 254
>gi|28879001|gb|AAH48159.1| Elavl4 protein [Mus musculus]
Length = 412
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 112/218 (51%), Gaps = 11/218 (5%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV ++A
Sbjct: 46 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 105
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+KA+N + + + ++V YA + + L++ LPK +++ E+ LFS YG
Sbjct: 106 EKAINTLNGLRL---QTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGR 162
Query: 129 IKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL S+G F++++ + +A A++ +NG+ K G++ P+ VK+A+ ++K
Sbjct: 163 IITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFANNPSQK 221
Query: 186 ERQARRAQKAQSQANNLP---NADSQHPSLFGALPMGY 220
QA +Q QS P + +Q L L M Y
Sbjct: 222 SSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAY 259
>gi|84662764|ref|NP_001033787.1| ELAV-like protein 4 isoform b [Mus musculus]
gi|291398924|ref|XP_002715150.1| PREDICTED: ELAV-like 4-like isoform 1 [Oryctolagus cuniculus]
gi|426215488|ref|XP_004002004.1| PREDICTED: ELAV-like protein 4 isoform 4 [Ovis aries]
gi|26347767|dbj|BAC37532.1| unnamed protein product [Mus musculus]
gi|112180554|gb|AAH52451.2| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D) [Mus musculus]
Length = 380
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 112/218 (51%), Gaps = 11/218 (5%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV ++A
Sbjct: 41 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 100
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+KA+N + + + ++V YA + + L++ LPK +++ E+ LFS YG
Sbjct: 101 EKAINTLNGLRL---QTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGR 157
Query: 129 IKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL S+G F++++ + +A A++ +NG+ K G++ P+ VK+A+ ++K
Sbjct: 158 IITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFANNPSQK 216
Query: 186 ERQARRAQKAQSQANNLP---NADSQHPSLFGALPMGY 220
QA +Q QS P + +Q L L M Y
Sbjct: 217 SSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAY 254
>gi|351713507|gb|EHB16426.1| ELAV-like protein 4 [Heterocephalus glaber]
Length = 385
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 112/218 (51%), Gaps = 11/218 (5%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV ++A
Sbjct: 46 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 105
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+KA+N + + + ++V YA + + L++ LPK +++ E+ LFS YG
Sbjct: 106 EKAINTLNGLRL---QTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGR 162
Query: 129 IKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL S+G F++++ + +A A++ +NG+ K G++ P+ VK+A+ ++K
Sbjct: 163 IITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFANNPSQK 221
Query: 186 ERQARRAQKAQSQANNLP---NADSQHPSLFGALPMGY 220
QA +Q QS P + +Q L L M Y
Sbjct: 222 SSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAY 259
>gi|355557990|gb|EHH14770.1| hypothetical protein EGK_00744 [Macaca mulatta]
Length = 385
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 112/218 (51%), Gaps = 11/218 (5%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV ++A
Sbjct: 46 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 105
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+KA+N + + + ++V YA + + L++ LPK +++ E+ LFS YG
Sbjct: 106 EKAINTLNGLRL---QTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGR 162
Query: 129 IKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL S+G F++++ + +A A++ +NG+ K G++ P+ VK+A+ ++K
Sbjct: 163 IITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFANNPSQK 221
Query: 186 ERQARRAQKAQSQANNLP---NADSQHPSLFGALPMGY 220
QA +Q QS P + +Q L L M Y
Sbjct: 222 SSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAY 259
>gi|301508553|gb|ADK78238.1| ELAV2 [Schmidtea mediterranea]
Length = 411
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 112/205 (54%), Gaps = 13/205 (6%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
S + + L V +P +MT+ ++ A+F +V+ +++DKTT S G FV + +A
Sbjct: 48 SLDNKTNLIVNYLPPNMTQEEVRALFSSIGVVESCKLVRDKTTGESLGYSFVKYLNYPDA 107
Query: 70 DKAVNACHNKKTLPGA---SSPLQVKYADGELERLE-HKLFIGMLPKNVSEAEVSALFSI 125
+KA+ +TL G + ++V A E ++ L+I LPK +++ E+ LFS
Sbjct: 108 EKAI------RTLNGLRLQNKTIKVSLARPSSEAIKGANLYICGLPKKMTQMELENLFSQ 161
Query: 126 YGTIKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADT- 183
G I +IL ++ S+G AF++++ + +A A++ +N ++ E S+ P++VK+A++
Sbjct: 162 CGKIITARILYDNKTGLSRGVAFIRFDQRSEAQLAIKKLNS-YQPENSTEPIIVKFANSP 220
Query: 184 EKERQARRAQKAQSQANNLPNADSQ 208
RQ + QA +PN ++Q
Sbjct: 221 STSRQDNISLAILKQAAQIPNQNAQ 245
>gi|112734730|ref|NP_001036780.1| sex-lethal isoform L [Bombyx mori]
gi|77379388|gb|ABA71351.1| sex-lethal isoform 1 [Bombyx mori]
Length = 336
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 93/178 (52%), Gaps = 6/178 (3%)
Query: 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
R L V +P+++TE L AMF ++ ++KD T S G FV ++A +A+
Sbjct: 62 RTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAI 121
Query: 74 NACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+ + + + L+V YA + + E L++ LP+ +++ ++ +F YG I
Sbjct: 122 DTFNGYQL---RNKRLKVSYARPSGDDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQK 178
Query: 133 QILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
ILR T +G AF++Y+ +E+A A+ A+N EG + PL VK A+ +++A
Sbjct: 179 HILRDKNSGTPRGVAFVRYDKREEAQEAIAALNNVIP-EGGTEPLSVKVAEEHGKQKA 235
>gi|27229298|ref|NP_758827.1| ELAV-like protein 3 [Rattus norvegicus]
gi|34328053|ref|NP_034617.1| ELAV-like protein 3 [Mus musculus]
gi|3913870|sp|Q60900.1|ELAV3_MOUSE RecName: Full=ELAV-like protein 3; AltName: Full=Hu-antigen C;
Short=HuC
gi|1146120|gb|AAC52999.1| mHuC-L [Mus musculus]
gi|26006109|dbj|BAC41352.1| HuC [Rattus norvegicus]
gi|30354162|gb|AAH52097.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C) [Mus musculus]
gi|148693297|gb|EDL25244.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C), isoform CRA_a [Mus musculus]
gi|149020436|gb|EDL78241.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C), isoform CRA_b [Rattus norvegicus]
Length = 367
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 103/194 (53%), Gaps = 8/194 (4%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV +A
Sbjct: 34 TDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDA 93
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
DKA+N + K + ++V YA + + L++ LPK +S+ E+ LFS YG
Sbjct: 94 DKAINTLNGLKL---QTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGR 150
Query: 129 IKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL + S+G F++++ + +A A++ +NG+ + G++ P+ VK+A+ ++K
Sbjct: 151 IITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQK 209
Query: 186 ERQARRAQKAQSQA 199
QA QS A
Sbjct: 210 TGQALLTHLYQSSA 223
>gi|84662766|ref|NP_034618.2| ELAV-like protein 4 isoform a [Mus musculus]
gi|354468156|ref|XP_003496533.1| PREDICTED: ELAV-like protein 4 isoform 3 [Cricetulus griseus]
gi|2500580|sp|Q61701.1|ELAV4_MOUSE RecName: Full=ELAV-like protein 4; AltName: Full=Hu-antigen D;
Short=HuD; AltName: Full=Paraneoplastic
encephalomyelitis antigen HuD
gi|603495|dbj|BAA06723.1| HuD [Mus musculus]
gi|440906869|gb|ELR57085.1| ELAV-like protein 4 [Bos grunniens mutus]
Length = 385
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 112/218 (51%), Gaps = 11/218 (5%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV ++A
Sbjct: 46 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 105
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+KA+N + + + ++V YA + + L++ LPK +++ E+ LFS YG
Sbjct: 106 EKAINTLNGLRL---QTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGR 162
Query: 129 IKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL S+G F++++ + +A A++ +NG+ K G++ P+ VK+A+ ++K
Sbjct: 163 IITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFANNPSQK 221
Query: 186 ERQARRAQKAQSQANNLP---NADSQHPSLFGALPMGY 220
QA +Q QS P + +Q L L M Y
Sbjct: 222 SSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAY 259
>gi|354475185|ref|XP_003499810.1| PREDICTED: ELAV-like protein 3 [Cricetulus griseus]
Length = 359
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 103/194 (53%), Gaps = 8/194 (4%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV +A
Sbjct: 33 TDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDA 92
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
DKA+N + K + ++V YA + + L++ LPK +S+ E+ LFS YG
Sbjct: 93 DKAINTLNGLKL---QTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGR 149
Query: 129 IKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL + S+G F++++ + +A A++ +NG+ + G++ P+ VK+A+ ++K
Sbjct: 150 IITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQK 208
Query: 186 ERQARRAQKAQSQA 199
QA QS A
Sbjct: 209 TGQALLTHLYQSSA 222
>gi|73977005|ref|XP_860272.1| PREDICTED: ELAV-like protein 4 isoform 15 [Canis lupus familiaris]
Length = 380
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 112/218 (51%), Gaps = 11/218 (5%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV ++A
Sbjct: 41 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 100
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+KA+N + L + ++V YA + + L++ LPK +++ E+ LFS YG
Sbjct: 101 EKAINTLNG---LRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGR 157
Query: 129 IKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL S+G F++++ + +A A++ +NG+ K G++ P+ VK+A+ ++K
Sbjct: 158 IITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFANNPSQK 216
Query: 186 ERQARRAQKAQSQANNLP---NADSQHPSLFGALPMGY 220
QA +Q QS P + +Q L L M Y
Sbjct: 217 SSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAY 254
>gi|179537|gb|AAA58396.1| brain protein [Homo sapiens]
gi|14280329|gb|AAK57541.1| HUDPRO1 [Homo sapiens]
gi|119627247|gb|EAX06842.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D), isoform CRA_b [Homo sapiens]
Length = 380
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 112/218 (51%), Gaps = 11/218 (5%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV ++A
Sbjct: 41 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 100
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+KA+N + L + ++V YA + + L++ LPK +++ E+ LFS YG
Sbjct: 101 EKAINTLNG---LRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGR 157
Query: 129 IKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL S+G F++++ + +A A++ +NG+ K G++ P+ VK+A+ ++K
Sbjct: 158 IITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFANNPSQK 216
Query: 186 ERQARRAQKAQSQANNLP---NADSQHPSLFGALPMGY 220
QA +Q QS P + +Q L L M Y
Sbjct: 217 SSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAY 254
>gi|344240064|gb|EGV96167.1| ELAV-like protein 3 [Cricetulus griseus]
Length = 352
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 103/194 (53%), Gaps = 8/194 (4%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV +A
Sbjct: 26 TDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDA 85
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
DKA+N + K + ++V YA + + L++ LPK +S+ E+ LFS YG
Sbjct: 86 DKAINTLNGLKL---QTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGR 142
Query: 129 IKDLQILRG-SQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL + S+G F++++ + +A A++ +NG+ + G++ P+ VK+A+ ++K
Sbjct: 143 IITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQK 201
Query: 186 ERQARRAQKAQSQA 199
QA QS A
Sbjct: 202 TGQALLTHLYQSSA 215
>gi|426387253|ref|XP_004060088.1| PREDICTED: ELAV-like protein 3 isoform 2 [Gorilla gorilla gorilla]
Length = 366
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 102/194 (52%), Gaps = 8/194 (4%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV +A
Sbjct: 26 TDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDA 85
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
DKA+N + K + ++V YA + + L++ LPK +S+ E+ LFS YG
Sbjct: 86 DKAINTLNGLKL---QTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGR 142
Query: 129 IKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL S+G F++++ + +A A++ +NG+ + G++ P+ VK+A+ ++K
Sbjct: 143 IITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQK 201
Query: 186 ERQARRAQKAQSQA 199
QA QS A
Sbjct: 202 TGQALLTHLYQSSA 215
>gi|348504313|ref|XP_003439706.1| PREDICTED: ELAV-like protein 4-like [Oreochromis niloticus]
Length = 476
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 114/219 (52%), Gaps = 13/219 (5%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV ++A
Sbjct: 151 NDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 210
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+KA+N + + + ++V YA + + L++ LPK +++ E+ LFS YG
Sbjct: 211 EKAINTLNGLRL---QTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGR 267
Query: 129 IKDLQILRGSQQT--SKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TE 184
I +IL Q T S+G F++++ + +A A++ +NG+ K G++ P+ VK+A+ ++
Sbjct: 268 IITSRILV-DQVTGGSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGAAEPITVKFANNPSQ 325
Query: 185 KERQARRAQKAQSQANNLP---NADSQHPSLFGALPMGY 220
K QA +Q QS P + +Q L L M Y
Sbjct: 326 KTSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAY 364
>gi|290563184|ref|NP_001166854.1| sex-lethal isoform S [Bombyx mori]
gi|89885657|dbj|BAE86939.1| sex-lethal [Bombyx mori]
Length = 290
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 93/178 (52%), Gaps = 6/178 (3%)
Query: 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
R L V +P+++TE L AMF ++ ++KD T S G FV ++A +A+
Sbjct: 16 RTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAI 75
Query: 74 NACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+ + + + L+V YA + + E L++ LP+ +++ ++ +F YG I
Sbjct: 76 DTFNGYQL---RNKRLKVSYARPSGDDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQK 132
Query: 133 QILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
ILR T +G AF++Y+ +E+A A+ A+N EG + PL VK A+ +++A
Sbjct: 133 HILRDKNSGTPRGVAFVRYDKREEAQEAIAALNNVIP-EGGTEPLSVKVAEEHGKQKA 189
>gi|47220048|emb|CAG12196.1| unnamed protein product [Tetraodon nigroviridis]
Length = 363
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 103/194 (53%), Gaps = 8/194 (4%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV +A
Sbjct: 31 TDDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDA 90
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
DKA+N + K + ++V YA + + L++ LPK +S+ ++ LFS YG
Sbjct: 91 DKAINTLNGLKL---QTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKDMEQLFSQYGR 147
Query: 129 IKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL S+G F++++ + +A A++ +NG+ + G++ P+ VK+A+ ++K
Sbjct: 148 IITSRILVDQVTGISRGVGFIRFDKRNEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQK 206
Query: 186 ERQARRAQKAQSQA 199
QA Q Q+ A
Sbjct: 207 TGQALLTQLYQTAA 220
>gi|281337375|gb|EFB12959.1| hypothetical protein PANDA_010283 [Ailuropoda melanoleuca]
Length = 369
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 102/194 (52%), Gaps = 8/194 (4%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV +A
Sbjct: 31 TDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDA 90
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
DKA+N + K + ++V YA + + L++ LPK +S+ E+ LFS YG
Sbjct: 91 DKAINTLNGLKL---QTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGR 147
Query: 129 IKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL S+G F++++ + +A A++ +NG+ + G++ P+ VK+A+ ++K
Sbjct: 148 IITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQK 206
Query: 186 ERQARRAQKAQSQA 199
QA QS A
Sbjct: 207 TGQALLTHLYQSSA 220
>gi|390465920|ref|XP_003733490.1| PREDICTED: ELAV-like protein 4 isoform 3 [Callithrix jacchus]
gi|403258119|ref|XP_003921626.1| PREDICTED: ELAV-like protein 4 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 366
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 112/218 (51%), Gaps = 11/218 (5%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV ++A
Sbjct: 41 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 100
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+KA+N + L + ++V YA + + L++ LPK +++ E+ LFS YG
Sbjct: 101 EKAINTLNG---LRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGR 157
Query: 129 IKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL S+G F++++ + +A A++ +NG+ K G++ P+ VK+A+ ++K
Sbjct: 158 IITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFANNPSQK 216
Query: 186 ERQARRAQKAQSQANNLP---NADSQHPSLFGALPMGY 220
QA +Q QS P + +Q L L M Y
Sbjct: 217 SSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAY 254
>gi|390465918|ref|XP_003733489.1| PREDICTED: ELAV-like protein 4 isoform 2 [Callithrix jacchus]
gi|403258117|ref|XP_003921625.1| PREDICTED: ELAV-like protein 4 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 371
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 112/218 (51%), Gaps = 11/218 (5%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV ++A
Sbjct: 46 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 105
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+KA+N + L + ++V YA + + L++ LPK +++ E+ LFS YG
Sbjct: 106 EKAINTLNG---LRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGR 162
Query: 129 IKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL S+G F++++ + +A A++ +NG+ K G++ P+ VK+A+ ++K
Sbjct: 163 IITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFANNPSQK 221
Query: 186 ERQARRAQKAQSQANNLP---NADSQHPSLFGALPMGY 220
QA +Q QS P + +Q L L M Y
Sbjct: 222 SSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAY 259
>gi|345780791|ref|XP_859879.2| PREDICTED: ELAV-like protein 4 isoform 4 [Canis lupus familiaris]
Length = 364
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 112/218 (51%), Gaps = 11/218 (5%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV ++A
Sbjct: 39 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 98
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+KA+N + L + ++V YA + + L++ LPK +++ E+ LFS YG
Sbjct: 99 EKAINTLNG---LRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGR 155
Query: 129 IKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL S+G F++++ + +A A++ +NG+ K G++ P+ VK+A+ ++K
Sbjct: 156 IITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFANNPSQK 214
Query: 186 ERQARRAQKAQSQANNLP---NADSQHPSLFGALPMGY 220
QA +Q QS P + +Q L L M Y
Sbjct: 215 SSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAY 252
>gi|125991914|ref|NP_001075075.1| ELAV-like protein 4 [Bos taurus]
gi|73976985|ref|XP_859918.1| PREDICTED: ELAV-like protein 4 isoform 5 [Canis lupus familiaris]
gi|291398926|ref|XP_002715151.1| PREDICTED: ELAV-like 4-like isoform 2 [Oryctolagus cuniculus]
gi|301772324|ref|XP_002921582.1| PREDICTED: ELAV-like protein 4-like [Ailuropoda melanoleuca]
gi|426215482|ref|XP_004002001.1| PREDICTED: ELAV-like protein 4 isoform 1 [Ovis aries]
gi|124829171|gb|AAI33284.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D) [Bos taurus]
gi|296489084|tpg|DAA31197.1| TPA: ELAV-like 4 [Bos taurus]
Length = 366
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 112/218 (51%), Gaps = 11/218 (5%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV ++A
Sbjct: 41 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 100
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+KA+N + L + ++V YA + + L++ LPK +++ E+ LFS YG
Sbjct: 101 EKAINTLNG---LRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGR 157
Query: 129 IKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL S+G F++++ + +A A++ +NG+ K G++ P+ VK+A+ ++K
Sbjct: 158 IITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFANNPSQK 216
Query: 186 ERQARRAQKAQSQANNLP---NADSQHPSLFGALPMGY 220
QA +Q QS P + +Q L L M Y
Sbjct: 217 SSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAY 254
>gi|338727192|ref|XP_001916382.2| PREDICTED: LOW QUALITY PROTEIN: ELAV-like protein 3-like [Equus
caballus]
Length = 345
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 102/194 (52%), Gaps = 8/194 (4%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV +A
Sbjct: 37 TDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDA 96
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
DKA+N + K + ++V YA + + L++ LPK +S+ E+ LFS YG
Sbjct: 97 DKAINTLNGLKL---QTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGR 153
Query: 129 IKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL S+G F++++ + +A A++ +NG+ + G++ P+ VK+A+ ++K
Sbjct: 154 IITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPL-GAAEPITVKFANNPSQK 212
Query: 186 ERQARRAQKAQSQA 199
QA QS A
Sbjct: 213 TGQALLTHLYQSSA 226
>gi|114556468|ref|XP_001135779.1| PREDICTED: ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 isoform 12 [Pan troglodytes]
gi|332219801|ref|XP_003259046.1| PREDICTED: ELAV-like protein 4 isoform 1 [Nomascus leucogenys]
gi|395855041|ref|XP_003799980.1| PREDICTED: ELAV-like protein 4 isoform 3 [Otolemur garnettii]
gi|397518902|ref|XP_003829614.1| PREDICTED: ELAV-like protein 4 isoform 1 [Pan paniscus]
gi|402854503|ref|XP_003891907.1| PREDICTED: ELAV-like protein 4 isoform 1 [Papio anubis]
gi|426329573|ref|XP_004025813.1| PREDICTED: ELAV-like protein 4 isoform 1 [Gorilla gorilla gorilla]
gi|221042444|dbj|BAH12899.1| unnamed protein product [Homo sapiens]
gi|261860582|dbj|BAI46813.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like protein 4
[synthetic construct]
Length = 371
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 112/218 (51%), Gaps = 11/218 (5%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV ++A
Sbjct: 46 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 105
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+KA+N + L + ++V YA + + L++ LPK +++ E+ LFS YG
Sbjct: 106 EKAINTLNG---LRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGR 162
Query: 129 IKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL S+G F++++ + +A A++ +NG+ K G++ P+ VK+A+ ++K
Sbjct: 163 IITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFANNPSQK 221
Query: 186 ERQARRAQKAQSQANNLP---NADSQHPSLFGALPMGY 220
QA +Q QS P + +Q L L M Y
Sbjct: 222 SSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAY 259
>gi|297664979|ref|XP_002810890.1| PREDICTED: ELAV-like protein 4 isoform 3 [Pongo abelii]
Length = 371
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 112/218 (51%), Gaps = 11/218 (5%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV ++A
Sbjct: 46 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 105
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+KA+N + L + ++V YA + + L++ LPK +++ E+ LFS YG
Sbjct: 106 EKAINTLNG---LRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGR 162
Query: 129 IKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL S+G F++++ + +A A++ +NG+ K G++ P+ VK+A+ ++K
Sbjct: 163 IITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFANNPSQK 221
Query: 186 ERQARRAQKAQSQANNLP---NADSQHPSLFGALPMGY 220
QA +Q QS P + +Q L L M Y
Sbjct: 222 SSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAY 259
>gi|149693651|ref|XP_001492503.1| PREDICTED: ELAV-like protein 4 isoform 1 [Equus caballus]
Length = 366
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 112/218 (51%), Gaps = 11/218 (5%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV ++A
Sbjct: 41 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 100
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+KA+N + L + ++V YA + + L++ LPK +++ E+ LFS YG
Sbjct: 101 EKAINTLNG---LRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGR 157
Query: 129 IKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL S+G F++++ + +A A++ +NG+ K G++ P+ VK+A+ ++K
Sbjct: 158 IITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFANNPSQK 216
Query: 186 ERQARRAQKAQSQANNLP---NADSQHPSLFGALPMGY 220
QA +Q QS P + +Q L L M Y
Sbjct: 217 SSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAY 254
>gi|119627249|gb|EAX06844.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D), isoform CRA_d [Homo sapiens]
Length = 365
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 112/218 (51%), Gaps = 11/218 (5%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV ++A
Sbjct: 40 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 99
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+KA+N + L + ++V YA + + L++ LPK +++ E+ LFS YG
Sbjct: 100 EKAINTLNG---LRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGR 156
Query: 129 IKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL S+G F++++ + +A A++ +NG+ K G++ P+ VK+A+ ++K
Sbjct: 157 IITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFANNPSQK 215
Query: 186 ERQARRAQKAQSQANNLP---NADSQHPSLFGALPMGY 220
QA +Q QS P + +Q L L M Y
Sbjct: 216 SSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAY 253
>gi|77379390|gb|ABA71352.1| sex-lethal isoform 2 [Bombyx mori]
Length = 313
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 93/178 (52%), Gaps = 6/178 (3%)
Query: 14 RVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAV 73
R L V +P+++TE L AMF ++ ++KD T S G FV ++A +A+
Sbjct: 62 RTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAI 121
Query: 74 NACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGTIKDL 132
+ + + + L+V YA + + E L++ LP+ +++ ++ +F YG I
Sbjct: 122 DTFNGYQL---RNKRLKVSYARPSGDDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQK 178
Query: 133 QILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQA 189
ILR T +G AF++Y+ +E+A A+ A+N EG + PL VK A+ +++A
Sbjct: 179 HILRDKNSGTPRGVAFVRYDKREEAQEAIAALNNVIP-EGGTEPLSVKVAEEHGKQKA 235
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 13 ERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72
+ L+V +P+ +T+ QL +F ++ + + +I++DK + RG FV R+EA +A
Sbjct: 147 KETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNSGTPRGVAFVRYDKREEAQEA 206
Query: 73 VNACHNKKTLP-GASSPLQVKYAD 95
+ A +N +P G + PL VK A+
Sbjct: 207 IAALNN--VIPEGGTEPLSVKVAE 228
>gi|348554579|ref|XP_003463103.1| PREDICTED: ELAV-like protein 4 isoform 2 [Cavia porcellus]
Length = 347
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 104/192 (54%), Gaps = 8/192 (4%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV ++A
Sbjct: 34 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 93
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+KA+N + L + ++V YA + + L++ LPK +++ E+ LFS YG
Sbjct: 94 EKAINTLNG---LRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGR 150
Query: 129 IKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL S+G F++++ + +A A++ +NG+ K G++ P+ VK+A+ ++K
Sbjct: 151 IITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFANNPSQK 209
Query: 186 ERQARRAQKAQS 197
QA +Q QS
Sbjct: 210 SSQALLSQLYQS 221
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 84/202 (41%), Gaps = 54/202 (26%)
Query: 17 LFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNAC 76
L+V +PK MT+ +L +F ++ + I+ D+ T SRG F+ R EA++A+
Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 186
Query: 77 HNKKTLPGASSPLQVKYADGELER--------------------LEHK------------ 104
+ +K GA+ P+ VK+A+ ++ L H+
Sbjct: 187 NGQKP-SGATEPITVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRFSRFSPITI 245
Query: 105 --------------------LFIGMLPKNVSEAEVSALFSIYGTIKDLQILRG-SQQTSK 143
+F+ L + E+ + LF +G + +++++R + K
Sbjct: 246 DGMTSLVGMNIPGHTGTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCK 305
Query: 144 GCAFLKYETKEQALAALEAING 165
G F+ ++A A+ ++NG
Sbjct: 306 GFGFVTMTNYDEAAMAIASLNG 327
>gi|195395310|ref|XP_002056279.1| GJ10859 [Drosophila virilis]
gi|194142988|gb|EDW59391.1| GJ10859 [Drosophila virilis]
Length = 388
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 93/190 (48%), Gaps = 6/190 (3%)
Query: 2 AESKKEKKSSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFV 61
A S + + E L V +P M E +L A+F F + V II+D T AS FV
Sbjct: 16 ASSSPAEDQTGETTNLLVNYLPFDMLEGELYALFVSFGHIKHVKIIRDAETGASHCYGFV 75
Query: 62 ICPSRQEADKAVNACHNKKTLPGASSPLQVKYAD-GELERLEHKLFIGMLPKNVSEAEVS 120
+ A+ A C N + + G L+V A ++ K+++ LP + +E +V
Sbjct: 76 NFSAAGNANLA-QVCLNGRQVRGKR--LKVSPARPSSMDIRNAKVYVANLPIDYNEQKVR 132
Query: 121 ALFSIYGTIKDLQILRGS-QQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVK 179
A F YG I DL +L+ S+G AF++++ K A A+ +NG + +EG S PL V+
Sbjct: 133 ATFGRYGNILDLNVLKDRFTGLSRGIAFVRFDLKSSADMAISVMNG-YTLEGGSFPLQVR 191
Query: 180 WADTEKERQA 189
A K +A
Sbjct: 192 LAKRPKAWEA 201
>gi|338721769|ref|XP_003364429.1| PREDICTED: ELAV-like protein 4 [Equus caballus]
Length = 371
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 112/218 (51%), Gaps = 11/218 (5%)
Query: 10 SSEERVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEA 69
+ + + L V +P++MT+ + ++F ++ +++DK T S G FV ++A
Sbjct: 46 TDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDA 105
Query: 70 DKAVNACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEAEVSALFSIYGT 128
+KA+N + L + ++V YA + + L++ LPK +++ E+ LFS YG
Sbjct: 106 EKAINTLNG---LRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGR 162
Query: 129 IKDLQILRGSQQ-TSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD--TEK 185
I +IL S+G F++++ + +A A++ +NG+ K G++ P+ VK+A+ ++K
Sbjct: 163 IITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ-KPSGATEPITVKFANNPSQK 221
Query: 186 ERQARRAQKAQSQANNLP---NADSQHPSLFGALPMGY 220
QA +Q QS P + +Q L L M Y
Sbjct: 222 SSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAY 259
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.131 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,972,121,517
Number of Sequences: 23463169
Number of extensions: 271693668
Number of successful extensions: 764030
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7078
Number of HSP's successfully gapped in prelim test: 9697
Number of HSP's that attempted gapping in prelim test: 721487
Number of HSP's gapped (non-prelim): 37726
length of query: 354
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 211
effective length of database: 9,003,962,200
effective search space: 1899836024200
effective search space used: 1899836024200
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 77 (34.3 bits)