BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 018555
         (354 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9C0Y8|YKM6_SCHPO UPF0613 protein PB24D3.06c OS=Schizosaccharomyces pombe (strain 972
           / ATCC 24843) GN=SPAPB24D3.06c PE=3 SV=1
          Length = 316

 Score =  119 bits (298), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 136/265 (51%), Gaps = 28/265 (10%)

Query: 74  GVLFKYGPKPV--------QVAFKTGDYQQQVIFIGGLTDGFFATEYLEPLAIALDKERW 125
           G+L +Y  + V         V   +   +  ++F+GGL DG     Y++ L   LD+  W
Sbjct: 7   GILHEYTERLVAFELVGKSNVTLTSNVTRSLLLFVGGLGDGLLTVPYVQELVNPLDEIGW 66

Query: 126 SLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSE----GVVLLGHSTGCQDIVH 181
           S+VQ    SSY G+GT SL++D  ++ + + Y ++   ++     +VL+GHSTG Q++++
Sbjct: 67  SIVQVQTQSSYIGWGTGSLKRDDEDLHKAVDYFLHIGGADFSTRKIVLMGHSTGSQNVLY 126

Query: 182 YMRANAACSRAVRAAIFQAPVSDRE--YRATLPE-TAAMID-LASSMIREGRGSELMPRE 237
           Y+   +     + A I QAPVSDRE  Y+    E T  ++D + +  + +G G++++PR 
Sbjct: 127 YL-TQSILPNYLIAGIAQAPVSDREAAYQFNGKEKTKELVDWVKAEYLDKGLGNDVLPRS 185

Query: 238 ADPC----SPITAQRYHSLCAYMGDDDMFSSDLSDDQLKQRLGHM-------ANTPCQVI 286
                    P +A R   L    G+DD FSSDLS D   +  G++       A++   ++
Sbjct: 186 KVENFFGEVPTSANRCIDLTDVRGNDDFFSSDLSADDFAKTFGNLKEISGSTAHSQLILL 245

Query: 287 FSMADEYVPEYVDKKALVERLCRAM 311
            S  DE+V    DK  L+ R   ++
Sbjct: 246 MSERDEFVSPSTDKAQLLNRFRESI 270


>sp|P38139|LDH1_YEAST Lipid droplet hydrolase 1 OS=Saccharomyces cerevisiae (strain ATCC
           204508 / S288c) GN=LDH1 PE=1 SV=2
          Length = 375

 Score = 37.0 bits (84), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 26/123 (21%)

Query: 98  IFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQD--AMEIDQLI 155
           +F+ GL       E  EPL   +D ++    +  +T    G+G SS   D   +++ +LI
Sbjct: 90  VFVPGLAGNL---EQFEPLLELVDSDQ----KAFLTLDLPGFGHSSEWSDYPMLKVVELI 142

Query: 156 SYLI-----------------NKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIF 198
             L+                 N  N   +VL+GHS GC    H    + A ++AV+  + 
Sbjct: 143 FVLVCDVLRKWSTAVPNNDNVNPFNGHKIVLVGHSMGCFLACHLYEQHMADTKAVQTLVL 202

Query: 199 QAP 201
             P
Sbjct: 203 LTP 205


>sp|P55086|PAR2_MOUSE Proteinase-activated receptor 2 OS=Mus musculus GN=F2rl1 PE=1 SV=1
          Length = 399

 Score = 31.6 bits (70), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 2/104 (1%)

Query: 29  SSSTSWFSGIRGCLNRSASCKVTSNSASGGQDMGGPVVMGKNQFRGVLFKYGPKPVQVAF 88
           S S +W  G    L  S SC  T N A G  +  G  ++G+ + +  +   G  PV+  F
Sbjct: 3   SLSLAWLLGGITLLAASVSCSRTENLAPGRNNSKGRSLIGRLETQPPITGKG-VPVEPGF 61

Query: 89  KTGDYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLM 132
              ++    I  G LT  F    Y+    I L     +L  FL 
Sbjct: 62  SIDEFSAS-ILTGKLTTVFLPVVYIIVFVIGLPSNGMALWIFLF 104


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.316    0.130    0.378 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 125,161,927
Number of Sequences: 539616
Number of extensions: 5186312
Number of successful extensions: 36020
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 173
Number of HSP's successfully gapped in prelim test: 58
Number of HSP's that attempted gapping in prelim test: 27630
Number of HSP's gapped (non-prelim): 5164
length of query: 354
length of database: 191,569,459
effective HSP length: 118
effective length of query: 236
effective length of database: 127,894,771
effective search space: 30183165956
effective search space used: 30183165956
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)