Query 018555
Match_columns 354
No_of_seqs 224 out of 1819
Neff 9.2
Searched_HMMs 46136
Date Fri Mar 29 09:59:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018555.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018555hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF08538 DUF1749: Protein of u 100.0 1E-38 2.3E-43 284.0 15.4 272 70-342 7-303 (303)
2 KOG4840 Predicted hydrolases o 100.0 6.1E-31 1.3E-35 219.0 22.3 287 66-354 8-299 (299)
3 TIGR02240 PHA_depoly_arom poly 100.0 1.8E-28 4E-33 223.1 21.9 237 92-347 23-269 (276)
4 PLN02679 hydrolase, alpha/beta 100.0 3.5E-28 7.6E-33 229.4 23.7 248 85-345 73-358 (360)
5 PLN02824 hydrolase, alpha/beta 100.0 4.6E-28 1E-32 222.4 21.6 245 82-344 16-294 (294)
6 PRK03592 haloalkane dehalogena 100.0 2.5E-27 5.4E-32 217.7 23.5 244 82-346 15-291 (295)
7 PRK00870 haloalkane dehalogena 100.0 1.4E-27 3E-32 220.2 21.0 243 84-344 34-301 (302)
8 PLN02965 Probable pheophorbida 100.0 7.5E-28 1.6E-32 216.6 18.5 230 95-345 4-254 (255)
9 PRK10349 carboxylesterase BioH 100.0 1.3E-27 2.9E-32 214.9 15.5 223 94-343 13-255 (256)
10 TIGR03343 biphenyl_bphD 2-hydr 99.9 1.5E-26 3.2E-31 210.8 20.6 236 84-342 20-281 (282)
11 PHA02857 monoglyceride lipase; 99.9 1.1E-25 2.4E-30 204.7 23.6 230 92-344 23-273 (276)
12 PRK03204 haloalkane dehalogena 99.9 3.6E-26 7.9E-31 209.1 18.8 242 83-341 23-285 (286)
13 PRK06489 hypothetical protein; 99.9 1.2E-25 2.6E-30 212.3 21.9 241 82-346 48-359 (360)
14 PLN02385 hydrolase; alpha/beta 99.9 1.3E-25 2.9E-30 211.2 20.9 233 92-345 85-346 (349)
15 PRK10749 lysophospholipase L2; 99.9 4.8E-25 1E-29 205.7 23.5 246 82-344 39-329 (330)
16 TIGR01738 bioH putative pimelo 99.9 6.2E-26 1.3E-30 200.5 16.5 221 94-341 4-245 (245)
17 TIGR03056 bchO_mg_che_rel puta 99.9 2.9E-25 6.2E-30 201.3 20.9 242 82-342 14-278 (278)
18 PLN03087 BODYGUARD 1 domain co 99.9 1.5E-24 3.2E-29 208.7 25.6 229 94-343 201-478 (481)
19 TIGR03611 RutD pyrimidine util 99.9 7.6E-25 1.6E-29 195.4 21.9 228 92-342 11-256 (257)
20 PLN02578 hydrolase 99.9 5E-25 1.1E-29 207.5 21.7 242 82-342 74-353 (354)
21 PLN02298 hydrolase, alpha/beta 99.9 1.6E-24 3.5E-29 202.2 24.3 233 93-345 58-318 (330)
22 PRK10673 acyl-CoA esterase; Pr 99.9 1.9E-25 4.1E-30 200.4 17.3 228 92-343 14-254 (255)
23 TIGR02427 protocat_pcaD 3-oxoa 99.9 4.2E-25 9.1E-30 195.7 17.2 227 93-342 12-251 (251)
24 PLN03084 alpha/beta hydrolase 99.9 3.8E-24 8.1E-29 202.0 23.9 244 81-343 112-383 (383)
25 PRK11126 2-succinyl-6-hydroxy- 99.9 1.8E-24 3.9E-29 192.6 20.0 223 94-344 2-242 (242)
26 KOG4178 Soluble epoxide hydrol 99.9 5.2E-24 1.1E-28 190.0 22.3 246 84-345 32-321 (322)
27 PRK07581 hypothetical protein; 99.9 2.5E-24 5.3E-29 201.8 20.5 242 83-345 25-337 (339)
28 PF12697 Abhydrolase_6: Alpha/ 99.9 3.5E-25 7.6E-30 192.9 13.7 213 97-336 1-228 (228)
29 PLN02652 hydrolase; alpha/beta 99.9 2.2E-23 4.7E-28 197.9 26.6 234 92-345 134-388 (395)
30 KOG1454 Predicted hydrolase/ac 99.9 3E-24 6.6E-29 198.3 19.7 237 92-345 56-325 (326)
31 PLN02211 methyl indole-3-aceta 99.9 3.1E-24 6.7E-29 194.9 18.9 231 91-344 15-270 (273)
32 TIGR01250 pro_imino_pep_2 prol 99.9 1.5E-23 3.2E-28 190.0 23.3 233 93-342 24-288 (288)
33 PRK08775 homoserine O-acetyltr 99.9 4.6E-24 1E-28 200.2 19.5 246 82-345 44-340 (343)
34 PLN02894 hydrolase, alpha/beta 99.9 2.3E-23 5E-28 198.9 24.5 237 91-346 102-387 (402)
35 KOG4409 Predicted hydrolase/ac 99.9 6.9E-24 1.5E-28 189.7 17.5 234 92-344 88-364 (365)
36 TIGR03695 menH_SHCHC 2-succiny 99.9 1.2E-23 2.5E-28 186.0 18.0 229 94-342 1-251 (251)
37 PRK00175 metX homoserine O-ace 99.9 6.3E-23 1.4E-27 194.9 19.8 235 94-346 48-376 (379)
38 PLN02511 hydrolase 99.9 1.5E-22 3.2E-27 192.6 20.8 237 92-345 98-366 (388)
39 TIGR01392 homoserO_Ac_trn homo 99.9 1.6E-22 3.4E-27 190.4 20.0 236 93-342 30-351 (351)
40 PRK14875 acetoin dehydrogenase 99.9 1.2E-21 2.7E-26 185.5 24.2 224 92-343 129-370 (371)
41 COG2267 PldB Lysophospholipase 99.9 8E-22 1.7E-26 180.4 20.4 233 94-346 34-296 (298)
42 PRK10985 putative hydrolase; P 99.9 6.6E-21 1.4E-25 177.4 23.3 243 83-344 43-320 (324)
43 KOG1455 Lysophospholipase [Lip 99.9 7.2E-22 1.6E-26 173.7 15.7 234 92-344 52-312 (313)
44 PLN02980 2-oxoglutarate decarb 99.9 1.1E-21 2.4E-26 214.0 20.0 236 93-349 1370-1644(1655)
45 TIGR01249 pro_imino_pep_1 prol 99.9 4.7E-21 1E-25 177.1 19.9 108 84-203 15-130 (306)
46 TIGR03100 hydr1_PEP hydrolase, 99.9 9.7E-21 2.1E-25 172.1 21.0 235 93-343 25-274 (274)
47 PRK13604 luxD acyl transferase 99.9 1.9E-20 4.2E-25 168.9 22.3 205 92-331 35-250 (307)
48 PRK05077 frsA fermentation/res 99.9 5.8E-20 1.3E-24 175.8 25.9 212 92-344 192-412 (414)
49 COG1647 Esterase/lipase [Gener 99.9 6.2E-21 1.3E-25 160.1 15.9 215 94-343 15-243 (243)
50 TIGR01607 PST-A Plasmodium sub 99.9 2.5E-20 5.3E-25 173.9 18.7 240 90-342 17-331 (332)
51 PRK05855 short chain dehydroge 99.8 3.8E-20 8.3E-25 185.4 19.7 238 92-345 23-293 (582)
52 PRK10566 esterase; Provisional 99.8 3E-19 6.5E-24 159.8 19.7 203 93-344 26-248 (249)
53 KOG2382 Predicted alpha/beta h 99.8 1.1E-19 2.4E-24 162.5 14.7 233 92-345 50-314 (315)
54 PF12695 Abhydrolase_5: Alpha/ 99.8 6.1E-19 1.3E-23 144.2 15.9 143 96-325 1-145 (145)
55 PRK11071 esterase YqiA; Provis 99.8 2.3E-18 5.1E-23 147.7 19.8 183 95-342 2-189 (190)
56 KOG2984 Predicted hydrolase [G 99.8 6E-19 1.3E-23 145.7 11.6 231 84-343 31-275 (277)
57 PRK06765 homoserine O-acetyltr 99.8 2.6E-17 5.5E-22 155.9 20.9 249 84-343 41-387 (389)
58 TIGR01836 PHA_synth_III_C poly 99.8 8.6E-18 1.9E-22 158.2 17.2 103 94-204 62-172 (350)
59 PLN02872 triacylglycerol lipas 99.8 9.2E-18 2E-22 159.0 16.6 240 93-346 73-391 (395)
60 KOG1552 Predicted alpha/beta h 99.8 2E-17 4.3E-22 143.0 17.1 198 84-346 49-254 (258)
61 KOG4667 Predicted esterase [Li 99.7 8.9E-17 1.9E-21 134.2 16.5 216 92-344 31-258 (269)
62 PF00561 Abhydrolase_1: alpha/ 99.7 1.5E-18 3.3E-23 152.3 6.0 199 125-338 1-229 (230)
63 PF00326 Peptidase_S9: Prolyl 99.7 3.8E-17 8.1E-22 143.0 14.4 192 114-345 4-210 (213)
64 COG0596 MhpC Predicted hydrola 99.7 5.1E-16 1.1E-20 137.0 21.1 230 94-342 21-280 (282)
65 TIGR01838 PHA_synth_I poly(R)- 99.7 6.6E-16 1.4E-20 150.5 18.7 219 93-330 187-461 (532)
66 COG1506 DAP2 Dipeptidyl aminop 99.7 5.3E-16 1.1E-20 156.0 18.2 211 95-345 395-617 (620)
67 PRK11460 putative hydrolase; P 99.7 7.8E-16 1.7E-20 136.3 16.1 174 92-343 14-207 (232)
68 KOG1838 Alpha/beta hydrolase [ 99.7 2.4E-15 5.2E-20 139.1 19.4 261 70-345 91-389 (409)
69 PLN00021 chlorophyllase 99.7 2E-15 4.3E-20 139.0 18.9 106 92-204 50-167 (313)
70 PRK07868 acyl-CoA synthetase; 99.7 1.5E-15 3.2E-20 160.8 19.2 237 93-345 66-362 (994)
71 COG0429 Predicted hydrolase of 99.7 7E-15 1.5E-19 131.5 20.0 246 82-344 60-340 (345)
72 TIGR03101 hydr2_PEP hydrolase, 99.7 2.2E-14 4.8E-19 128.7 22.6 103 94-205 25-136 (266)
73 KOG2564 Predicted acetyltransf 99.7 3.1E-15 6.7E-20 129.8 16.1 221 92-344 72-327 (343)
74 PLN02442 S-formylglutathione h 99.7 6.7E-15 1.4E-19 134.3 19.0 187 92-327 45-264 (283)
75 KOG4391 Predicted alpha/beta h 99.6 8.6E-15 1.9E-19 122.5 14.4 202 88-345 72-283 (300)
76 PF01738 DLH: Dienelactone hyd 99.6 2.5E-14 5.3E-19 125.6 17.3 176 93-343 13-216 (218)
77 TIGR02821 fghA_ester_D S-formy 99.6 1.7E-13 3.8E-18 124.5 21.1 202 92-342 40-272 (275)
78 PRK10162 acetyl esterase; Prov 99.6 3.3E-13 7.3E-18 125.2 22.2 221 91-344 78-315 (318)
79 PF02230 Abhydrolase_2: Phosph 99.6 3.1E-13 6.7E-18 118.5 18.3 184 87-344 7-215 (216)
80 TIGR01840 esterase_phb esteras 99.6 2.1E-13 4.6E-18 119.1 16.5 100 92-202 11-129 (212)
81 COG3208 GrsT Predicted thioest 99.6 1.6E-13 3.5E-18 118.1 15.2 221 92-343 5-235 (244)
82 COG2945 Predicted hydrolase of 99.5 7.9E-13 1.7E-17 109.2 15.5 171 92-342 26-205 (210)
83 PF06821 Ser_hydrolase: Serine 99.5 1.9E-13 4.1E-18 114.8 11.8 150 97-326 1-154 (171)
84 COG0400 Predicted esterase [Ge 99.5 1.6E-12 3.5E-17 111.8 14.3 175 91-343 15-204 (207)
85 PRK10115 protease 2; Provision 99.4 6E-12 1.3E-16 127.7 19.9 194 92-326 443-654 (686)
86 PF06500 DUF1100: Alpha/beta h 99.4 6.7E-12 1.5E-16 117.2 17.8 227 72-344 165-409 (411)
87 PF07859 Abhydrolase_3: alpha/ 99.4 2E-12 4.4E-17 112.6 13.0 199 97-326 1-209 (211)
88 COG0412 Dienelactone hydrolase 99.4 2.4E-11 5.2E-16 107.6 19.3 175 95-345 28-234 (236)
89 TIGR03230 lipo_lipase lipoprot 99.4 4.4E-12 9.6E-17 120.6 13.3 103 92-203 39-154 (442)
90 PF12740 Chlorophyllase2: Chlo 99.4 2.8E-11 6E-16 106.7 16.4 106 92-204 15-132 (259)
91 PF06057 VirJ: Bacterial virul 99.4 3E-11 6.5E-16 100.9 14.5 186 95-343 3-191 (192)
92 TIGR00976 /NonD putative hydro 99.3 6.4E-11 1.4E-15 118.0 19.4 104 92-206 20-135 (550)
93 PF05728 UPF0227: Uncharacteri 99.3 2E-10 4.3E-15 97.6 19.3 184 97-342 2-187 (187)
94 cd00707 Pancreat_lipase_like P 99.3 7.1E-12 1.5E-16 113.7 10.9 101 92-203 34-147 (275)
95 COG2021 MET2 Homoserine acetyl 99.3 9.4E-11 2E-15 106.9 17.7 238 92-343 49-367 (368)
96 PF05448 AXE1: Acetyl xylan es 99.3 1.4E-10 3E-15 107.1 18.5 203 92-343 81-319 (320)
97 COG4757 Predicted alpha/beta h 99.3 2.6E-11 5.7E-16 102.9 10.8 222 96-341 32-280 (281)
98 COG0657 Aes Esterase/lipase [L 99.3 3.5E-10 7.6E-15 104.8 19.6 217 93-342 78-308 (312)
99 PF06342 DUF1057: Alpha/beta h 99.3 2.3E-10 5E-15 100.7 16.5 100 94-205 35-139 (297)
100 COG3571 Predicted hydrolase of 99.3 1.2E-09 2.6E-14 87.7 17.7 183 92-344 12-211 (213)
101 PF07819 PGAP1: PGAP1-like pro 99.2 1.2E-10 2.5E-15 102.5 13.2 107 93-202 3-122 (225)
102 TIGR01839 PHA_synth_II poly(R) 99.2 3.4E-10 7.4E-15 109.8 16.8 107 92-204 213-329 (560)
103 PF09752 DUF2048: Uncharacteri 99.2 5.9E-10 1.3E-14 101.6 17.2 213 92-342 90-347 (348)
104 COG3545 Predicted esterase of 99.2 4.2E-10 9.2E-15 92.1 13.4 171 95-344 3-179 (181)
105 PF00975 Thioesterase: Thioest 99.2 7.3E-10 1.6E-14 97.7 15.3 101 95-202 1-103 (229)
106 PF06028 DUF915: Alpha/beta hy 99.2 1.7E-09 3.6E-14 96.3 16.0 202 93-341 10-252 (255)
107 KOG2624 Triglyceride lipase-ch 99.1 2.2E-09 4.8E-14 101.0 16.8 109 92-204 71-200 (403)
108 PRK05371 x-prolyl-dipeptidyl a 99.1 2.4E-09 5.2E-14 109.7 18.2 209 116-343 271-518 (767)
109 PF07224 Chlorophyllase: Chlor 99.1 2.1E-10 4.5E-15 99.4 8.8 107 92-206 44-160 (307)
110 TIGR03502 lipase_Pla1_cef extr 99.1 1.9E-10 4.2E-15 116.0 9.9 85 94-185 449-575 (792)
111 PF03403 PAF-AH_p_II: Platelet 99.1 8.4E-10 1.8E-14 104.3 12.6 102 92-203 98-262 (379)
112 PF10230 DUF2305: Uncharacteri 99.1 4E-09 8.6E-14 95.2 16.3 103 94-204 2-123 (266)
113 PF02273 Acyl_transf_2: Acyl t 99.1 4.3E-09 9.4E-14 90.4 15.3 203 93-331 29-243 (294)
114 KOG1515 Arylacetamide deacetyl 99.1 9.7E-09 2.1E-13 94.7 18.4 227 92-344 88-335 (336)
115 KOG3043 Predicted hydrolase re 99.1 3.1E-09 6.7E-14 90.2 13.7 169 94-344 39-240 (242)
116 KOG4627 Kynurenine formamidase 99.1 6.4E-10 1.4E-14 92.8 8.9 184 91-328 64-251 (270)
117 COG3458 Acetyl esterase (deace 99.0 7.1E-09 1.5E-13 90.3 13.1 206 92-344 81-317 (321)
118 PF03096 Ndr: Ndr family; Int 99.0 1.5E-09 3.2E-14 96.7 9.1 229 92-345 21-280 (283)
119 KOG2100 Dipeptidyl aminopeptid 99.0 1.2E-08 2.5E-13 104.5 15.3 206 93-345 525-748 (755)
120 PF01674 Lipase_2: Lipase (cla 98.9 2.2E-09 4.8E-14 93.2 7.0 83 95-185 2-95 (219)
121 COG3243 PhaC Poly(3-hydroxyalk 98.9 2.4E-08 5.2E-13 92.5 14.0 106 93-204 106-218 (445)
122 KOG2931 Differentiation-relate 98.9 4.3E-08 9.2E-13 86.5 13.9 226 92-345 44-307 (326)
123 KOG2281 Dipeptidyl aminopeptid 98.9 5.3E-08 1.1E-12 93.8 15.5 209 91-343 639-866 (867)
124 PF10503 Esterase_phd: Esteras 98.9 6E-08 1.3E-12 84.5 14.2 104 93-203 15-132 (220)
125 PF08840 BAAT_C: BAAT / Acyl-C 98.9 6.2E-09 1.4E-13 90.9 8.1 155 149-326 4-163 (213)
126 TIGR01849 PHB_depoly_PhaZ poly 98.8 3.6E-07 7.8E-12 86.4 19.3 103 95-205 103-210 (406)
127 PF02129 Peptidase_S15: X-Pro 98.8 2.2E-08 4.8E-13 90.9 10.7 105 91-206 17-139 (272)
128 COG4188 Predicted dienelactone 98.8 3.2E-08 6.9E-13 90.7 11.1 88 93-185 70-179 (365)
129 PRK04940 hypothetical protein; 98.8 3.3E-07 7.3E-12 76.6 15.9 117 165-342 60-178 (180)
130 PRK10252 entF enterobactin syn 98.7 3.4E-07 7.4E-12 100.5 18.3 101 93-202 1067-1170(1296)
131 PLN02733 phosphatidylcholine-s 98.7 3.3E-08 7.1E-13 94.8 8.9 89 109-202 106-200 (440)
132 PF12146 Hydrolase_4: Putative 98.7 2.1E-08 4.6E-13 72.8 5.5 65 87-158 8-74 (79)
133 PF03583 LIP: Secretory lipase 98.7 5.6E-07 1.2E-11 82.3 15.7 46 279-326 219-265 (290)
134 PF12048 DUF3530: Protein of u 98.7 1E-06 2.2E-11 81.3 17.4 187 92-344 85-309 (310)
135 COG4814 Uncharacterized protei 98.7 1.3E-06 2.7E-11 75.8 15.1 104 94-204 45-177 (288)
136 KOG3253 Predicted alpha/beta h 98.6 4.1E-07 8.9E-12 87.3 12.2 164 93-326 175-346 (784)
137 PF05990 DUF900: Alpha/beta hy 98.6 4.3E-07 9.3E-12 80.3 11.0 109 92-207 16-141 (233)
138 PTZ00472 serine carboxypeptida 98.6 6.6E-06 1.4E-10 80.1 20.2 108 92-206 75-219 (462)
139 KOG2551 Phospholipase/carboxyh 98.6 3.1E-06 6.8E-11 72.1 15.2 182 93-349 4-225 (230)
140 KOG3847 Phospholipase A2 (plat 98.6 9.5E-07 2.1E-11 78.7 12.3 40 92-134 116-155 (399)
141 PF03959 FSH1: Serine hydrolas 98.6 7E-07 1.5E-11 77.9 11.4 164 93-326 3-202 (212)
142 PF00151 Lipase: Lipase; Inte 98.5 2.3E-07 5E-12 86.1 8.2 108 92-203 69-187 (331)
143 PF12715 Abhydrolase_7: Abhydr 98.5 2.5E-07 5.3E-12 85.6 8.2 101 92-203 113-260 (390)
144 KOG2565 Predicted hydrolases o 98.5 6.7E-07 1.4E-11 81.4 9.9 96 94-200 152-261 (469)
145 COG3319 Thioesterase domains o 98.5 9.7E-07 2.1E-11 78.5 10.2 101 95-204 1-104 (257)
146 KOG3975 Uncharacterized conser 98.5 1.4E-05 3.1E-10 69.1 16.1 229 92-341 27-300 (301)
147 COG3946 VirJ Type IV secretory 98.4 2.3E-06 5.1E-11 78.8 10.7 87 93-185 259-346 (456)
148 PF10340 DUF2424: Protein of u 98.4 3.7E-06 7.9E-11 78.3 11.8 109 93-206 121-238 (374)
149 KOG1551 Uncharacterized conser 98.4 4E-06 8.7E-11 73.0 11.1 61 283-349 309-371 (371)
150 PLN02606 palmitoyl-protein thi 98.3 0.00013 2.7E-09 66.0 20.0 234 93-346 25-298 (306)
151 COG1075 LipA Predicted acetylt 98.3 2.1E-06 4.6E-11 80.1 8.6 102 93-202 58-163 (336)
152 KOG2112 Lysophospholipase [Lip 98.3 1.8E-05 4E-10 66.9 12.9 178 94-343 3-203 (206)
153 smart00824 PKS_TE Thioesterase 98.3 2.2E-05 4.8E-10 67.4 14.0 88 109-202 11-101 (212)
154 KOG1553 Predicted alpha/beta h 98.3 2.7E-06 5.9E-11 76.7 8.1 101 93-207 242-349 (517)
155 PF05677 DUF818: Chlamydia CHL 98.3 5.2E-05 1.1E-09 69.0 16.0 95 84-185 127-235 (365)
156 COG4782 Uncharacterized protei 98.2 6E-06 1.3E-10 75.4 9.5 111 92-206 114-237 (377)
157 COG4099 Predicted peptidase [G 98.2 1.1E-05 2.4E-10 71.5 10.8 99 95-202 192-303 (387)
158 PLN02633 palmitoyl protein thi 98.2 0.0004 8.7E-09 62.9 19.0 101 92-201 23-129 (314)
159 PF05705 DUF829: Eukaryotic pr 98.1 5.1E-05 1.1E-09 67.5 12.2 63 277-341 176-240 (240)
160 PF05057 DUF676: Putative seri 98.1 1.1E-05 2.4E-10 70.6 6.9 88 93-185 3-98 (217)
161 COG3509 LpqC Poly(3-hydroxybut 98.0 5.5E-05 1.2E-09 67.4 11.1 104 92-202 59-178 (312)
162 PF02450 LCAT: Lecithin:choles 98.0 1.5E-05 3.3E-10 76.0 7.7 86 112-203 66-160 (389)
163 KOG2541 Palmitoyl protein thio 98.0 0.00021 4.5E-09 62.8 13.4 98 95-201 24-126 (296)
164 PRK10439 enterobactin/ferric e 97.9 0.00055 1.2E-08 65.7 16.8 101 93-202 208-322 (411)
165 cd00312 Esterase_lipase Estera 97.9 5.6E-05 1.2E-09 74.6 10.3 109 92-203 93-213 (493)
166 KOG3724 Negative regulator of 97.9 0.0001 2.2E-09 73.4 11.4 105 92-200 87-217 (973)
167 COG1073 Hydrolases of the alph 97.9 0.00027 5.7E-09 64.0 13.2 65 274-344 226-297 (299)
168 KOG3101 Esterase D [General fu 97.9 0.0001 2.2E-09 62.4 9.2 188 92-326 42-262 (283)
169 PF08386 Abhydrolase_4: TAP-li 97.9 4.8E-05 1E-09 58.2 6.6 61 279-345 34-95 (103)
170 PF11339 DUF3141: Protein of u 97.8 0.0021 4.6E-08 61.7 18.5 81 109-200 86-172 (581)
171 PF11144 DUF2920: Protein of u 97.8 0.003 6.4E-08 59.4 19.2 63 282-345 295-369 (403)
172 COG2936 Predicted acyl esteras 97.8 0.00061 1.3E-08 66.6 14.6 103 92-205 43-161 (563)
173 PF00756 Esterase: Putative es 97.8 3.9E-05 8.5E-10 68.5 6.0 50 152-205 100-152 (251)
174 COG3150 Predicted esterase [Ge 97.7 0.0019 4.2E-08 52.8 14.2 92 97-205 2-93 (191)
175 PF00450 Peptidase_S10: Serine 97.7 0.0014 3E-08 63.0 16.2 108 92-206 38-184 (415)
176 COG2272 PnbA Carboxylesterase 97.6 0.00016 3.6E-09 68.9 6.7 110 92-204 92-218 (491)
177 COG1770 PtrB Protease II [Amin 97.6 0.0014 2.9E-08 64.7 12.8 208 92-338 446-670 (682)
178 PF00135 COesterase: Carboxyle 97.5 0.00075 1.6E-08 67.0 10.9 109 93-203 124-245 (535)
179 PLN02517 phosphatidylcholine-s 97.5 0.00022 4.8E-09 69.7 6.5 88 112-202 157-262 (642)
180 PF10142 PhoPQ_related: PhoPQ- 97.5 0.00078 1.7E-08 63.1 9.9 65 273-345 256-321 (367)
181 KOG2237 Predicted serine prote 97.5 0.0015 3.2E-08 64.0 11.7 109 92-206 468-587 (712)
182 PF07082 DUF1350: Protein of u 97.4 0.0009 2E-08 58.6 8.7 102 92-200 15-122 (250)
183 PF02089 Palm_thioest: Palmito 97.3 0.0014 3E-08 58.9 9.2 101 92-201 3-114 (279)
184 PF04301 DUF452: Protein of un 97.2 0.0024 5.2E-08 55.2 9.1 79 92-201 9-88 (213)
185 KOG2369 Lecithin:cholesterol a 97.2 0.0006 1.3E-08 64.6 5.5 87 111-200 124-222 (473)
186 PLN02209 serine carboxypeptida 97.2 0.16 3.4E-06 49.3 22.0 63 279-343 351-434 (437)
187 KOG2521 Uncharacterized conser 97.0 0.036 7.8E-07 51.5 15.4 241 92-345 37-291 (350)
188 PLN03016 sinapoylglucose-malat 97.0 0.071 1.5E-06 51.6 18.2 63 279-343 347-430 (433)
189 COG0627 Predicted esterase [Ge 96.9 0.041 8.9E-07 50.8 14.8 37 166-206 153-190 (316)
190 cd00741 Lipase Lipase. Lipase 96.9 0.0033 7.2E-08 51.6 7.1 52 150-201 13-65 (153)
191 PF07519 Tannase: Tannase and 96.8 0.15 3.2E-06 50.1 18.3 62 281-343 354-426 (474)
192 PF01764 Lipase_3: Lipase (cla 96.7 0.004 8.6E-08 50.1 5.8 55 149-203 48-106 (140)
193 PF05577 Peptidase_S28: Serine 96.6 0.0094 2E-07 57.9 8.8 102 92-203 27-148 (434)
194 COG1505 Serine proteases of th 96.5 0.026 5.6E-07 55.3 10.7 206 93-343 420-645 (648)
195 KOG1282 Serine carboxypeptidas 96.3 0.72 1.6E-05 44.7 19.3 64 280-345 364-449 (454)
196 cd00519 Lipase_3 Lipase (class 96.1 0.011 2.3E-07 52.1 5.8 54 150-203 113-168 (229)
197 PF06259 Abhydrolase_8: Alpha/ 96.1 0.18 3.9E-06 42.4 12.7 50 148-201 91-142 (177)
198 PF11288 DUF3089: Protein of u 96.1 0.013 2.9E-07 50.3 5.7 70 115-185 37-115 (207)
199 COG2382 Fes Enterochelin ester 96.1 0.13 2.9E-06 46.4 12.2 102 92-205 96-214 (299)
200 PF11187 DUF2974: Protein of u 96.0 0.03 6.4E-07 49.2 7.8 48 153-201 73-121 (224)
201 PF01083 Cutinase: Cutinase; 95.8 0.042 9.1E-07 46.5 7.4 54 147-200 63-119 (179)
202 KOG3967 Uncharacterized conser 95.4 0.16 3.5E-06 43.5 9.4 106 92-201 99-225 (297)
203 KOG1516 Carboxylesterase and r 95.3 0.057 1.2E-06 54.0 7.6 108 94-202 112-231 (545)
204 PLN02454 triacylglycerol lipas 95.2 0.034 7.4E-07 52.8 5.4 56 149-204 210-272 (414)
205 COG2819 Predicted hydrolase of 95.1 0.037 7.9E-07 49.2 4.9 39 162-204 134-173 (264)
206 PLN00413 triacylglycerol lipas 94.3 0.071 1.5E-06 51.3 5.2 35 150-184 269-303 (479)
207 PLN02162 triacylglycerol lipas 94.2 0.074 1.6E-06 51.1 5.1 36 149-184 262-297 (475)
208 PLN02571 triacylglycerol lipas 93.9 0.09 2E-06 50.0 5.0 36 150-185 209-246 (413)
209 COG4287 PqaA PhoPQ-activated p 93.9 0.24 5.2E-06 45.9 7.3 63 275-345 325-388 (507)
210 PLN02408 phospholipase A1 93.8 0.1 2.2E-06 48.9 5.0 36 150-185 183-220 (365)
211 KOG4388 Hormone-sensitive lipa 93.8 0.26 5.6E-06 48.3 7.7 99 94-199 396-504 (880)
212 PLN02934 triacylglycerol lipas 93.7 0.1 2.2E-06 50.7 4.9 35 150-184 306-340 (515)
213 PLN02310 triacylglycerol lipas 93.3 0.16 3.6E-06 48.1 5.6 21 165-185 209-229 (405)
214 PLN02324 triacylglycerol lipas 92.8 0.17 3.7E-06 48.1 4.9 36 150-185 198-235 (415)
215 PF05277 DUF726: Protein of un 92.7 0.29 6.2E-06 45.7 6.2 43 162-204 217-261 (345)
216 PLN02847 triacylglycerol lipas 92.4 0.21 4.5E-06 49.4 5.1 31 155-185 241-271 (633)
217 PLN03037 lipase class 3 family 92.1 0.19 4E-06 49.0 4.3 21 165-185 318-338 (525)
218 KOG2183 Prolylcarboxypeptidase 92.1 0.44 9.6E-06 44.9 6.6 97 95-198 81-197 (492)
219 PLN02802 triacylglycerol lipas 92.1 0.24 5.2E-06 48.1 5.0 35 151-185 314-350 (509)
220 PLN02753 triacylglycerol lipas 91.9 0.24 5.1E-06 48.4 4.7 36 150-185 292-332 (531)
221 PLN02719 triacylglycerol lipas 91.5 0.3 6.4E-06 47.6 4.9 36 150-185 278-318 (518)
222 COG4947 Uncharacterized protei 91.4 6.8 0.00015 32.6 11.9 51 151-205 87-138 (227)
223 PLN02761 lipase class 3 family 91.1 0.31 6.8E-06 47.5 4.7 36 150-185 273-314 (527)
224 KOG4372 Predicted alpha/beta h 90.7 0.36 7.8E-06 45.4 4.5 87 91-185 77-170 (405)
225 PF06850 PHB_depo_C: PHB de-po 90.6 0.47 1E-05 40.2 4.7 65 277-343 131-201 (202)
226 PLN02213 sinapoylglucose-malat 90.4 0.82 1.8E-05 42.5 6.7 63 279-343 233-316 (319)
227 KOG4569 Predicted lipase [Lipi 89.1 0.62 1.3E-05 43.6 4.8 37 149-185 155-191 (336)
228 KOG1202 Animal-type fatty acid 88.4 2.1 4.6E-05 45.8 8.3 91 92-201 2121-2217(2376)
229 KOG2029 Uncharacterized conser 88.2 1.2 2.6E-05 44.0 6.1 78 124-201 478-570 (697)
230 PF08237 PE-PPE: PE-PPE domain 85.0 4.1 8.9E-05 35.8 7.4 62 124-185 2-68 (225)
231 PLN02213 sinapoylglucose-malat 84.5 4.3 9.2E-05 37.7 7.7 78 126-206 3-99 (319)
232 COG2939 Carboxypeptidase C (ca 83.9 4.8 0.0001 39.2 7.8 102 93-201 100-234 (498)
233 KOG2182 Hydrolytic enzymes of 82.7 12 0.00027 36.4 10.0 98 91-201 83-205 (514)
234 PF00326 Peptidase_S9: Prolyl 81.6 3.4 7.5E-05 35.4 5.6 68 93-162 143-210 (213)
235 COG2830 Uncharacterized protei 81.3 1.7 3.6E-05 35.7 3.1 69 92-185 9-77 (214)
236 COG3673 Uncharacterized conser 81.2 21 0.00045 32.9 10.2 90 92-185 29-142 (423)
237 COG5153 CVT17 Putative lipase 80.4 2.3 5E-05 38.2 3.9 36 150-185 261-296 (425)
238 KOG4540 Putative lipase essent 80.4 2.3 5E-05 38.2 3.9 36 150-185 261-296 (425)
239 PF04083 Abhydro_lipase: Parti 78.5 1.9 4.1E-05 29.5 2.3 19 92-113 41-59 (63)
240 COG0529 CysC Adenylylsulfate k 77.3 12 0.00027 31.5 7.0 40 92-132 20-59 (197)
241 PLN02834 3-dehydroquinate synt 74.7 86 0.0019 30.5 14.3 45 111-160 114-158 (433)
242 COG1506 DAP2 Dipeptidyl aminop 74.6 9.3 0.0002 39.0 7.1 69 92-162 549-617 (620)
243 PF02230 Abhydrolase_2: Phosph 72.4 5.8 0.00013 34.3 4.4 59 94-159 155-213 (216)
244 PF10605 3HBOH: 3HB-oligomer h 71.9 6.1 0.00013 39.4 4.7 51 276-326 551-604 (690)
245 COG4553 DepA Poly-beta-hydroxy 71.7 82 0.0018 28.9 12.7 66 281-348 340-411 (415)
246 TIGR03712 acc_sec_asp2 accesso 70.8 1.1E+02 0.0023 30.2 12.5 106 84-204 278-391 (511)
247 KOG2385 Uncharacterized conser 70.2 10 0.00023 37.0 5.7 43 161-203 443-487 (633)
248 PF06441 EHN: Epoxide hydrolas 68.9 13 0.00028 28.7 5.0 22 83-104 77-102 (112)
249 PF09994 DUF2235: Uncharacteri 64.1 71 0.0015 28.9 9.8 37 149-185 75-112 (277)
250 COG3727 Vsr DNA G:T-mismatch r 60.2 19 0.0004 28.5 4.4 37 94-130 57-114 (150)
251 COG3340 PepE Peptidase E [Amin 59.2 26 0.00057 30.3 5.6 41 92-132 30-70 (224)
252 PF10081 Abhydrolase_9: Alpha/ 59.1 83 0.0018 28.6 8.9 110 94-205 32-149 (289)
253 COG0400 Predicted esterase [Ge 58.5 27 0.00058 30.2 5.7 61 92-160 144-204 (207)
254 PRK11460 putative hydrolase; P 57.5 29 0.00063 30.4 5.9 62 93-161 147-208 (232)
255 cd01714 ETF_beta The electron 55.8 31 0.00067 29.6 5.6 61 116-185 68-133 (202)
256 PF06792 UPF0261: Uncharacteri 55.2 1.5E+02 0.0032 28.5 10.4 32 163-198 93-125 (403)
257 PF01583 APS_kinase: Adenylyls 54.4 26 0.00057 28.8 4.7 38 94-132 1-38 (156)
258 PRK02399 hypothetical protein; 51.8 2.1E+02 0.0045 27.6 10.7 34 161-198 93-127 (406)
259 COG4822 CbiK Cobalamin biosynt 51.1 85 0.0018 27.3 7.2 61 94-170 138-199 (265)
260 PRK12467 peptide synthase; Pro 49.4 68 0.0015 40.6 9.0 85 94-185 3692-3777(3956)
261 TIGR00128 fabD malonyl CoA-acy 49.1 21 0.00046 32.2 3.8 24 162-185 79-103 (290)
262 PRK11613 folP dihydropteroate 48.2 76 0.0016 28.9 7.1 60 112-179 164-225 (282)
263 PF00698 Acyl_transf_1: Acyl t 48.1 16 0.00034 33.8 2.8 25 160-184 79-103 (318)
264 smart00827 PKS_AT Acyl transfe 46.6 30 0.00064 31.4 4.4 25 160-184 77-101 (298)
265 TIGR03131 malonate_mdcH malona 46.6 31 0.00066 31.4 4.4 25 161-185 72-96 (295)
266 PF05576 Peptidase_S37: PS-10 45.9 25 0.00054 33.7 3.7 97 92-202 61-169 (448)
267 KOG1610 Corticosteroid 11-beta 45.5 53 0.0011 30.3 5.6 64 94-166 28-106 (322)
268 TIGR02764 spore_ybaN_pdaB poly 44.2 19 0.0004 30.5 2.4 36 96-131 153-188 (191)
269 TIGR02816 pfaB_fam PfaB family 44.1 27 0.0006 34.9 3.9 26 160-185 260-285 (538)
270 COG1448 TyrB Aspartate/tyrosin 42.7 1.2E+02 0.0027 28.7 7.6 89 94-201 171-263 (396)
271 PF06792 UPF0261: Uncharacteri 42.7 43 0.00093 32.1 4.7 47 93-146 183-229 (403)
272 PF06564 YhjQ: YhjQ protein; 42.6 32 0.0007 30.5 3.7 38 96-133 2-39 (243)
273 KOG2112 Lysophospholipase [Lip 42.2 47 0.001 28.6 4.5 60 94-157 144-203 (206)
274 PF12242 Eno-Rase_NADH_b: NAD( 41.7 68 0.0015 22.9 4.4 38 148-185 20-60 (78)
275 KOG1200 Mitochondrial/plastidi 40.4 2.1E+02 0.0046 24.7 7.9 51 113-163 27-89 (256)
276 PRK04435 hypothetical protein; 40.4 1.3E+02 0.0029 24.3 6.8 76 93-172 67-146 (147)
277 cd01983 Fer4_NifH The Fer4_Nif 39.9 40 0.00086 24.0 3.4 33 98-131 2-34 (99)
278 KOG1283 Serine carboxypeptidas 39.9 84 0.0018 29.2 5.9 79 125-206 72-169 (414)
279 PRK02399 hypothetical protein; 39.4 53 0.0012 31.4 4.8 47 93-146 184-230 (406)
280 PRK10279 hypothetical protein; 38.4 44 0.00095 30.7 4.1 31 154-185 23-53 (300)
281 TIGR02873 spore_ylxY probable 38.4 33 0.00072 30.9 3.2 33 96-131 232-264 (268)
282 PF01656 CbiA: CobQ/CobB/MinD/ 37.8 34 0.00074 28.5 3.1 27 106-132 9-35 (195)
283 PRK13230 nitrogenase reductase 37.6 56 0.0012 29.4 4.7 35 96-132 3-37 (279)
284 PF03205 MobB: Molybdopterin g 37.5 82 0.0018 25.2 5.1 53 97-154 2-54 (140)
285 PRK13397 3-deoxy-7-phosphohept 37.5 3E+02 0.0065 24.6 9.1 94 92-199 120-219 (250)
286 COG0331 FabD (acyl-carrier-pro 36.0 41 0.00089 31.1 3.5 30 156-185 75-105 (310)
287 KOG1201 Hydroxysteroid 17-beta 35.8 78 0.0017 29.0 5.1 33 95-132 38-70 (300)
288 PRK10343 RNA-binding protein Y 35.7 1.5E+02 0.0034 22.1 5.9 63 94-172 18-80 (97)
289 cd07212 Pat_PNPLA9 Patatin-lik 35.6 54 0.0012 30.3 4.3 32 154-185 17-52 (312)
290 COG2240 PdxK Pyridoxal/pyridox 35.5 3.3E+02 0.0072 24.8 9.0 89 119-207 23-117 (281)
291 TIGR00632 vsr DNA mismatch end 35.1 50 0.0011 25.7 3.3 15 116-130 99-113 (117)
292 TIGR01361 DAHP_synth_Bsub phos 35.0 3.3E+02 0.0072 24.4 9.2 91 92-199 130-229 (260)
293 cd07225 Pat_PNPLA6_PNPLA7 Pata 34.5 54 0.0012 30.2 4.0 60 113-185 4-63 (306)
294 PF14606 Lipase_GDSL_3: GDSL-l 34.3 1E+02 0.0022 25.9 5.3 55 112-172 47-101 (178)
295 PHA02519 plasmid partition pro 34.0 76 0.0016 30.3 5.1 41 92-132 103-143 (387)
296 PRK05282 (alpha)-aspartyl dipe 33.9 94 0.002 27.4 5.3 40 93-132 30-69 (233)
297 PF09419 PGP_phosphatase: Mito 33.6 1.3E+02 0.0029 25.0 5.8 54 119-176 35-89 (168)
298 KOG1752 Glutaredoxin and relat 33.4 1.2E+02 0.0027 23.0 5.1 78 92-185 12-89 (104)
299 PF03283 PAE: Pectinacetyleste 33.2 62 0.0013 30.6 4.3 38 148-185 137-176 (361)
300 TIGR00521 coaBC_dfp phosphopan 32.9 3.2E+02 0.0069 26.2 9.0 89 95-185 113-224 (390)
301 cd03409 Chelatase_Class_II Cla 32.8 1.2E+02 0.0027 22.1 5.2 27 96-122 2-28 (101)
302 COG1087 GalE UDP-glucose 4-epi 32.7 2.4E+02 0.0051 26.1 7.6 90 96-200 2-117 (329)
303 cd07227 Pat_Fungal_NTE1 Fungal 32.3 63 0.0014 29.2 4.0 31 154-185 28-58 (269)
304 cd03818 GT1_ExpC_like This fam 32.1 60 0.0013 30.7 4.1 32 97-133 2-33 (396)
305 COG1709 Predicted transcriptio 32.0 1.9E+02 0.0042 25.2 6.5 42 86-132 186-228 (241)
306 PF09949 DUF2183: Uncharacteri 31.9 2.2E+02 0.0048 21.4 8.2 80 111-198 11-97 (100)
307 cd07198 Patatin Patatin-like p 31.4 75 0.0016 26.2 4.1 31 154-185 16-46 (172)
308 cd00951 KDGDH 5-dehydro-4-deox 31.0 4E+02 0.0088 24.1 9.3 89 108-204 18-106 (289)
309 TIGR03249 KdgD 5-dehydro-4-deo 31.0 4.1E+02 0.0089 24.1 9.4 89 108-204 23-111 (296)
310 TIGR01007 eps_fam capsular exo 30.7 83 0.0018 26.6 4.4 38 95-132 17-54 (204)
311 PRK05568 flavodoxin; Provision 30.6 2.4E+02 0.0052 22.1 6.9 35 96-133 5-39 (142)
312 PRK05579 bifunctional phosphop 30.6 3.2E+02 0.0068 26.3 8.7 77 94-172 116-196 (399)
313 cd07207 Pat_ExoU_VipD_like Exo 30.4 82 0.0018 26.4 4.3 32 153-185 16-47 (194)
314 PRK09936 hypothetical protein; 30.4 1.8E+02 0.0038 26.6 6.4 49 108-160 35-83 (296)
315 PF07519 Tannase: Tannase and 30.1 1.4E+02 0.003 29.4 6.3 78 94-177 353-441 (474)
316 PF08386 Abhydrolase_4: TAP-li 29.9 2.3E+02 0.005 21.1 6.2 44 94-143 34-77 (103)
317 COG3562 KpsS Capsule polysacch 29.8 2.5E+02 0.0055 26.3 7.3 69 95-173 14-91 (403)
318 PF00004 AAA: ATPase family as 29.6 1.5E+02 0.0032 22.5 5.4 54 98-159 1-54 (132)
319 PHA02114 hypothetical protein 29.3 77 0.0017 23.7 3.3 33 96-131 84-116 (127)
320 cd07210 Pat_hypo_W_succinogene 28.5 92 0.002 27.1 4.3 31 154-185 18-48 (221)
321 TIGR02884 spore_pdaA delta-lac 28.4 79 0.0017 27.5 3.9 35 95-131 187-221 (224)
322 COG1752 RssA Predicted esteras 28.3 75 0.0016 29.2 3.9 31 154-185 29-59 (306)
323 PRK10566 esterase; Provisional 28.0 1.5E+02 0.0032 25.7 5.6 60 94-160 186-247 (249)
324 PF14763 HPS3_C: Hermansky-Pud 28.0 17 0.00036 33.3 -0.4 66 273-344 54-134 (353)
325 PF14253 AbiH: Bacteriophage a 27.4 50 0.0011 29.4 2.5 20 163-182 233-252 (270)
326 cd02042 ParA ParA and ParB of 27.0 79 0.0017 23.3 3.2 34 99-132 3-36 (104)
327 PRK03620 5-dehydro-4-deoxygluc 26.9 4.9E+02 0.011 23.8 9.3 89 108-204 25-113 (303)
328 PF06500 DUF1100: Alpha/beta h 26.5 48 0.001 31.9 2.3 60 279-345 189-256 (411)
329 COG1255 Uncharacterized protei 25.8 70 0.0015 24.9 2.6 22 112-133 24-45 (129)
330 PRK13705 plasmid-partitioning 25.8 1.1E+02 0.0023 29.3 4.6 40 93-132 104-143 (388)
331 cd07209 Pat_hypo_Ecoli_Z1214_l 25.7 98 0.0021 26.7 4.0 31 154-185 16-46 (215)
332 COG3933 Transcriptional antite 25.7 4.3E+02 0.0093 25.8 8.3 78 92-184 107-184 (470)
333 PRK13753 dihydropteroate synth 25.7 1.7E+02 0.0037 26.6 5.6 59 117-180 157-217 (279)
334 cd04888 ACT_PheB-BS C-terminal 25.5 1.5E+02 0.0032 20.2 4.3 61 111-171 12-76 (76)
335 PF03721 UDPG_MGDP_dh_N: UDP-g 25.4 91 0.002 26.3 3.6 29 98-132 3-31 (185)
336 TIGR03029 EpsG chain length de 25.3 89 0.0019 28.0 3.8 41 92-132 100-140 (274)
337 PF10686 DUF2493: Protein of u 25.3 1.4E+02 0.003 20.8 3.9 33 94-131 31-64 (71)
338 PRK06171 sorbitol-6-phosphate 25.1 4.4E+02 0.0096 22.9 8.3 62 113-176 22-87 (266)
339 KOG3062 RNA polymerase II elon 25.1 4.7E+02 0.01 23.2 7.8 72 96-170 2-79 (281)
340 PF05576 Peptidase_S37: PS-10 24.9 1.4E+02 0.0031 28.8 5.0 62 273-342 345-412 (448)
341 PRK13869 plasmid-partitioning 24.9 1.3E+02 0.0028 28.9 5.0 38 95-132 121-158 (405)
342 PRK14457 ribosomal RNA large s 24.6 4.7E+02 0.01 24.6 8.5 74 97-180 260-334 (345)
343 PRK07831 short chain dehydroge 24.6 3.9E+02 0.0084 23.3 7.8 19 114-132 32-50 (262)
344 PRK10115 protease 2; Provision 24.5 1.6E+02 0.0035 30.6 5.9 73 86-161 598-675 (686)
345 PRK05854 short chain dehydroge 24.2 5.4E+02 0.012 23.3 10.0 75 114-202 28-103 (313)
346 cd02040 NifH NifH gene encodes 24.2 1.3E+02 0.0027 26.7 4.6 34 97-132 4-37 (270)
347 PRK07313 phosphopantothenoylcy 24.2 2E+02 0.0043 24.2 5.4 62 94-157 113-176 (182)
348 PHA02518 ParA-like protein; Pr 24.0 1.3E+02 0.0028 25.3 4.5 27 106-132 11-37 (211)
349 KOG1209 1-Acyl dihydroxyaceton 23.9 1.2E+02 0.0025 26.6 3.9 36 94-133 6-41 (289)
350 cd02034 CooC The accessory pro 23.4 2.1E+02 0.0045 22.0 5.0 24 109-132 12-35 (116)
351 TIGR01969 minD_arch cell divis 23.4 1.1E+02 0.0023 26.7 3.9 27 106-132 11-37 (251)
352 cd02037 MRP-like MRP (Multiple 23.1 1E+02 0.0022 25.2 3.4 27 106-132 10-36 (169)
353 TIGR00253 RNA_bind_YhbY putati 22.7 3.3E+02 0.0071 20.3 5.9 63 94-172 16-78 (95)
354 cd00952 CHBPH_aldolase Trans-o 22.5 6E+02 0.013 23.3 9.1 88 108-203 26-114 (309)
355 cd00408 DHDPS-like Dihydrodipi 22.4 5.6E+02 0.012 22.8 9.1 90 108-205 15-105 (281)
356 cd04951 GT1_WbdM_like This fam 22.3 3.7E+02 0.008 24.3 7.5 36 96-132 2-37 (360)
357 PRK13255 thiopurine S-methyltr 22.3 1.2E+02 0.0026 26.3 3.9 16 117-132 52-67 (218)
358 KOG4127 Renal dipeptidase [Pos 22.2 2.6E+02 0.0056 26.5 6.0 73 93-169 265-339 (419)
359 TIGR01496 DHPS dihydropteroate 22.2 2.9E+02 0.0064 24.6 6.4 54 113-174 150-205 (257)
360 PF05724 TPMT: Thiopurine S-me 22.0 1.1E+02 0.0023 26.7 3.5 31 94-132 37-67 (218)
361 cd03413 CbiK_C Anaerobic cobal 21.9 3E+02 0.0065 20.7 5.5 27 96-124 3-29 (103)
362 COG0541 Ffh Signal recognition 21.9 4.8E+02 0.01 25.4 7.9 71 117-198 175-246 (451)
363 PRK06398 aldose dehydrogenase; 21.8 4.9E+02 0.011 22.7 7.9 48 114-163 20-71 (258)
364 COG1540 Uncharacterized protei 21.8 75 0.0016 27.9 2.4 32 97-130 220-251 (252)
365 COG1534 Predicted RNA-binding 21.7 3.5E+02 0.0077 20.3 6.0 63 94-172 17-79 (97)
366 COG4221 Short-chain alcohol de 21.5 2.6E+02 0.0055 24.9 5.6 33 96-133 7-39 (246)
367 TIGR01968 minD_bact septum sit 21.3 1.3E+02 0.0028 26.4 4.0 36 97-132 3-38 (261)
368 cd07205 Pat_PNPLA6_PNPLA7_NTE1 21.3 1.6E+02 0.0035 24.2 4.3 32 153-185 17-48 (175)
369 cd07228 Pat_NTE_like_bacteria 21.2 1.6E+02 0.0035 24.3 4.3 31 154-185 18-48 (175)
370 PRK06523 short chain dehydroge 21.1 4.9E+02 0.011 22.5 7.8 20 114-133 23-42 (260)
371 COG1576 Uncharacterized conser 20.9 3.1E+02 0.0068 22.5 5.6 57 115-182 59-115 (155)
372 PRK10824 glutaredoxin-4; Provi 20.7 4E+02 0.0088 20.5 7.6 80 92-185 13-92 (115)
373 cd07211 Pat_PNPLA8 Patatin-lik 20.2 1.2E+02 0.0027 27.7 3.7 50 123-184 6-60 (308)
374 KOG4389 Acetylcholinesterase/B 20.0 1.7E+02 0.0036 29.0 4.5 105 96-203 137-255 (601)
No 1
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=100.00 E-value=1e-38 Score=283.96 Aligned_cols=272 Identities=44% Similarity=0.721 Sum_probs=165.5
Q ss_pred CcceeeeEeeCCCCeeEEEecCC--CCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCc
Q 018555 70 NQFRGVLFKYGPKPVQVAFKTGD--YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQD 147 (354)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~--~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~ 147 (354)
.+..+++|+|..+.++++|.... .+..||||+|+++|+.+..|...|++.|.+.+|.|+.+-+++++.|||.+++.++
T Consensus 7 ~~~~G~lh~Y~~~~~afe~~~~~~~~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~SL~~D 86 (303)
T PF08538_consen 7 PPQQGILHHYTPKLVAFEFTSSSSSAPNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSSLDRD 86 (303)
T ss_dssp --EEEEEEEECCTTEEEEEEEE-TTSSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--HHHH
T ss_pred CCCceEEEEECCCCeEEEecCCCCCCCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcchhhhH
Confidence 35679999999999999998754 6789999999999999999999999999888999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhC----CCCcEEEEEEChhHHHHHHHHHhcc--cccccccEEEEecccCchHhhhcch----hHHHH
Q 018555 148 AMEIDQLISYLINKD----NSEGVVLLGHSTGCQDIVHYMRANA--ACSRAVRAAIFQAPVSDREYRATLP----ETAAM 217 (354)
Q Consensus 148 ~~dl~~~i~~l~~~~----~~~~~~LvGhS~GG~~a~~~a~~p~--~~~~~v~~lIl~~p~~~~~~~~~~~----~~~~~ 217 (354)
++||.++|++|+... +.++|+|+|||.|+.-+++|+..+. .....|+++||++|+++++...... ...++
T Consensus 87 ~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~ 166 (303)
T PF08538_consen 87 VEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEEL 166 (303)
T ss_dssp HHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHHH
T ss_pred HHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHHH
Confidence 999999999999863 5789999999999999999998822 2346899999999999999776543 36788
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCC----CCcchHHHHhhhhcccCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCC
Q 018555 218 IDLASSMIREGRGSELMPREADP----CSPITAQRYHSLCAYMGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEY 293 (354)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~ 293 (354)
++.+++++.+++.++++|..... ..|++.+||+++....+.+|+|+.++.++.+.+.++++.+ |+|++.+++|++
T Consensus 167 v~~A~~~i~~g~~~~~lp~~~~~~~~~~~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v~~-plLvl~Sg~DEy 245 (303)
T PF08538_consen 167 VALAKELIAEGKGDEILPREFTPLVFYDTPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKVSK-PLLVLYSGKDEY 245 (303)
T ss_dssp HHHHHHHHHCT-TT-GG----GGTTT-SS---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG--S--EEEEEE--TT-
T ss_pred HHHHHHHHHcCCCCceeeccccccccCCCcccHHHHHhccCCCCcccccCCCCCHHHHHHHhccCCC-ceEEEecCCCce
Confidence 88999999999999998876543 6889999999999999999999999999999999999999 999999999999
Q ss_pred CCchhcHHHHHHHHHHHcCCCe----EEEecCCCcccCc--cH---HHHHHHHHHHHH
Q 018555 294 VPEYVDKKALVERLCRAMGGAE----KVEIEHGIHSLSN--RV---KEAVQAIIDFVK 342 (354)
Q Consensus 294 vp~~~~~~~~~~~~~~~~~~~~----~~~i~~agH~~~~--~p---~~~~~~i~~Fl~ 342 (354)
||..++++++.++|++..+... --+||||+|.+.+ .. +++.+.|..||+
T Consensus 246 vP~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 246 VPPWVDKEALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp ----------------------------------------------------------
T ss_pred ecccccccccccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 9999999999999998776432 3489999999932 22 368888898885
No 2
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=100.00 E-value=6.1e-31 Score=219.04 Aligned_cols=287 Identities=39% Similarity=0.568 Sum_probs=243.4
Q ss_pred cccCCcceeeeEeeCCCCeeEEEecCCCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCcc
Q 018555 66 VMGKNQFRGVLFKYGPKPVQVAFKTGDYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQ 145 (354)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~ 145 (354)
-+..++.++.++.|+++...+.|..+..+..||||+|+++|+....|...|+..|-+.+|.++.+.+|+++.|||.++..
T Consensus 8 I~~~~~~rgvlF~y~~Ks~~va~~~gv~~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~slk 87 (299)
T KOG4840|consen 8 IMSREELRGVLFVYDSKSSLVAYSNGVESVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTFSLK 87 (299)
T ss_pred cccchheeeeEEEecCccceeeeccCceEEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeecccccccccccccc
Confidence 45667899999999999888999988778999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHHHhhCCCCcEEEEEEChhHHHHHHHHHhcccccccccEEEEecccCchHhhhcch-hHHHHHHH-HHH
Q 018555 146 QDAMEIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDREYRATLP-ETAAMIDL-ASS 223 (354)
Q Consensus 146 ~~~~dl~~~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~p~~~~~~v~~lIl~~p~~~~~~~~~~~-~~~~~~~~-~~~ 223 (354)
++++|+..+++++...-...+++|+|||.|+.-.++|+.. ..+...|.+.|+++|+++++.....+ ....+.++ ...
T Consensus 88 ~D~edl~~l~~Hi~~~~fSt~vVL~GhSTGcQdi~yYlTn-t~~~r~iraaIlqApVSDrEYqf~~~~etk~l~d~l~a~ 166 (299)
T KOG4840|consen 88 DDVEDLKCLLEHIQLCGFSTDVVLVGHSTGCQDIMYYLTN-TTKDRKIRAAILQAPVSDREYQFLEEHETKDLSDLLRAA 166 (299)
T ss_pred ccHHHHHHHHHHhhccCcccceEEEecCccchHHHHHHHh-ccchHHHHHHHHhCccchhhhhhccccccHHHHHHHHHH
Confidence 9999999999998764334599999999999999999932 12333899999999999998655443 44566663 345
Q ss_pred HHhcCCCCCCCCCCCCCCCcchHHHHhhhhcccCCCccccCCCChHHHHHHhcCC---CCCcEEEEeeCCCCCCCchhcH
Q 018555 224 MIREGRGSELMPREADPCSPITAQRYHSLCAYMGDDDMFSSDLSDDQLKQRLGHM---ANTPCQVIFSMADEYVPEYVDK 300 (354)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~i---~~~PvLvi~G~~D~~vp~~~~~ 300 (354)
++..++.++++|+...+..|...+|...++...+.+++|+.++.++++...++.. .+ -++++.++.|++|+++.+.
T Consensus 167 ~~~~grgedv~pR~~~~~~p~sa~R~~dl~~~~G~dDmFSSdLS~D~f~~~lg~gsta~~-qiif~ms~rDEyv~~~~dk 245 (299)
T KOG4840|consen 167 KETIGRGEDVAPRYGGGSQPLSARRALDLFSRYGKDDMFSSDLSEDRFYMELGEGSTAGA-QIIFVMSGRDEYVKADIDK 245 (299)
T ss_pred HhhhccccccccccCCCCccccHHHHHHHHHHhCCccchhcccchhHHHHHhccCCCCCc-eEEEEecCcccccCcchHH
Confidence 6778889999999998899999999999999999999999999999999999876 67 8899999999999999888
Q ss_pred HHHHHHHHHHcCCCeEEEecCCCcccCccHHHHHHHHHHHHHhhCCCCCCCCCC
Q 018555 301 KALVERLCRAMGGAEKVEIEHGIHSLSNRVKEAVQAIIDFVKREGPKGWDDPWN 354 (354)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~i~~agH~~~~~p~~~~~~i~~Fl~~~~~~~~~~~~~ 354 (354)
+.+..++.+.....+-..+..+.|-+.+.-....+.|..|+.+..+..|++||+
T Consensus 246 k~llnR~s~~~r~~e~~~~lsg~~~~~n~~~~~sqei~k~i~~~~~s~~d~pid 299 (299)
T KOG4840|consen 246 KLLLNRNSRVERIPEGTHVLSGAEDVENFLGFLSQEIEKAIGQKAQSPDDRPID 299 (299)
T ss_pred HHHHHhhhhhccCCcccccccccccHhhhhhhhhHHHHHHHHhcCCCcccCCCC
Confidence 888888877765555555555555554445567888999999999999999995
No 3
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.96 E-value=1.8e-28 Score=223.12 Aligned_cols=237 Identities=17% Similarity=0.185 Sum_probs=151.5
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccC---cHHHHHHHHHHHHhhCCCCcEE
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ---DAMEIDQLISYLINKDNSEGVV 168 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~---~~~dl~~~i~~l~~~~~~~~~~ 168 (354)
+.+++|||+||++ .+...|..+++.|.+ +|+|+++|+ +|||.|+.+. ..+++.+.++.+.+.++.++++
T Consensus 23 ~~~~plvllHG~~---~~~~~w~~~~~~L~~-~~~vi~~Dl----~G~G~S~~~~~~~~~~~~~~~~~~~i~~l~~~~~~ 94 (276)
T TIGR02240 23 EGLTPLLIFNGIG---ANLELVFPFIEALDP-DLEVIAFDV----PGVGGSSTPRHPYRFPGLAKLAARMLDYLDYGQVN 94 (276)
T ss_pred CCCCcEEEEeCCC---cchHHHHHHHHHhcc-CceEEEECC----CCCCCCCCCCCcCcHHHHHHHHHHHHHHhCcCceE
Confidence 3458999999999 778889999999986 899999999 7999997543 3455555555555566778999
Q ss_pred EEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhhcchhHHHHHHHHHHHHhcCCCCCCCCCCCC---CCCcc
Q 018555 169 LLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLASSMIREGRGSELMPREAD---PCSPI 244 (354)
Q Consensus 169 LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 244 (354)
||||||||.+++.+|.+ |+ +|++|||+++..........+............+.............. ...+.
T Consensus 95 LvG~S~GG~va~~~a~~~p~----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (276)
T TIGR02240 95 AIGVSWGGALAQQFAHDYPE----RCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPSHGIHIAPDIYGGAFRRDPE 170 (276)
T ss_pred EEEECHHHHHHHHHHHHCHH----HhhheEEeccCCccccCCCchhHHHHhcCchhhhccccccchhhhhccceeeccch
Confidence 99999999999999999 88 999999999865422110000000000000000000000000000000 00000
Q ss_pred hHHHHhhhhcccCCCccccCCC--ChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCCeEEEecCC
Q 018555 245 TAQRYHSLCAYMGDDDMFSSDL--SDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGGAEKVEIEHG 322 (354)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~i~~a 322 (354)
....+...........++...+ ........+.++++ |+|+|+|++|.++|+. ..+.+.+.+++++++++++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-P~lii~G~~D~~v~~~-----~~~~l~~~~~~~~~~~i~~- 243 (276)
T TIGR02240 171 LAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQQ-PTLVLAGDDDPIIPLI-----NMRLLAWRIPNAELHIIDD- 243 (276)
T ss_pred hhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCCC-CEEEEEeCCCCcCCHH-----HHHHHHHhCCCCEEEEEcC-
Confidence 0001110000000000000000 01112255789999 9999999999999988 6778888899999999975
Q ss_pred Cccc-CccHHHHHHHHHHHHHhhCCC
Q 018555 323 IHSL-SNRVKEAVQAIIDFVKREGPK 347 (354)
Q Consensus 323 gH~~-~~~p~~~~~~i~~Fl~~~~~~ 347 (354)
||++ .++|++|++.|.+|+++..+.
T Consensus 244 gH~~~~e~p~~~~~~i~~fl~~~~~~ 269 (276)
T TIGR02240 244 GHLFLITRAEAVAPIIMKFLAEERQR 269 (276)
T ss_pred CCchhhccHHHHHHHHHHHHHHhhhh
Confidence 9999 899999999999999986543
No 4
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.96 E-value=3.5e-28 Score=229.35 Aligned_cols=248 Identities=13% Similarity=0.150 Sum_probs=150.9
Q ss_pred eEEEecCCC------CcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccC----cHHHHHHH
Q 018555 85 QVAFKTGDY------QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ----DAMEIDQL 154 (354)
Q Consensus 85 ~~~~~~~~~------~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~----~~~dl~~~ 154 (354)
.++|...+. +|+|||+||++ .+...|..++..|++ +|+|+++|+ +|||.|+.+. ..+++.+.
T Consensus 73 ~i~Y~~~G~g~~~~~gp~lvllHG~~---~~~~~w~~~~~~L~~-~~~via~Dl----~G~G~S~~~~~~~~~~~~~a~~ 144 (360)
T PLN02679 73 SINYLVKGSPEVTSSGPPVLLVHGFG---ASIPHWRRNIGVLAK-NYTVYAIDL----LGFGASDKPPGFSYTMETWAEL 144 (360)
T ss_pred eEEEEEecCcccCCCCCeEEEECCCC---CCHHHHHHHHHHHhc-CCEEEEECC----CCCCCCCCCCCccccHHHHHHH
Confidence 566654333 48999999999 778889999999986 899999999 7999997652 23444444
Q ss_pred HHHHHhhCCCCcEEEEEEChhHHHHHHHHH-h-cccccccccEEEEecccCchHhhhcch--------hHHHHHH-----
Q 018555 155 ISYLINKDNSEGVVLLGHSTGCQDIVHYMR-A-NAACSRAVRAAIFQAPVSDREYRATLP--------ETAAMID----- 219 (354)
Q Consensus 155 i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~-~-p~~~~~~v~~lIl~~p~~~~~~~~~~~--------~~~~~~~----- 219 (354)
+..+.+.++.++++||||||||.+++.++. . |+ +|+++||+++........... .....+.
T Consensus 145 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~----rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (360)
T PLN02679 145 ILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRD----LVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQ 220 (360)
T ss_pred HHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChh----hcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhc
Confidence 444444566789999999999999998886 4 78 999999998753211000000 0000000
Q ss_pred --HHHHHHhcCCCCC----CCCCCCCC---CCcchHHHHhhhhcccCCCcccc---CCCChHHHHHHhcCCCCCcEEEEe
Q 018555 220 --LASSMIREGRGSE----LMPREADP---CSPITAQRYHSLCAYMGDDDMFS---SDLSDDQLKQRLGHMANTPCQVIF 287 (354)
Q Consensus 220 --~~~~~~~~~~~~~----~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~~~~~~l~~i~~~PvLvi~ 287 (354)
....++....... ++...+.. ..+.....+..........+.+. ......+....+.++++ |+|+|+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-PtLii~ 299 (360)
T PLN02679 221 RGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISL-PILVLW 299 (360)
T ss_pred hhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCC-CEEEEE
Confidence 0000000000000 00000000 00000000000000000000000 00011112356788999 999999
Q ss_pred eCCCCCCCchhcHHHHHHHHHHHcCCCeEEEecCCCccc-CccHHHHHHHHHHHHHhhC
Q 018555 288 SMADEYVPEYVDKKALVERLCRAMGGAEKVEIEHGIHSL-SNRVKEAVQAIIDFVKREG 345 (354)
Q Consensus 288 G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~-~~~p~~~~~~i~~Fl~~~~ 345 (354)
|++|.++|.........+.+.+.+|++++++|+++||++ .++|++|++.|.+||+++.
T Consensus 300 G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~~~ 358 (360)
T PLN02679 300 GDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQLP 358 (360)
T ss_pred eCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccCHHHHHHHHHHHHHhcC
Confidence 999999987622222445667778999999999999999 8999999999999998754
No 5
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.96 E-value=4.6e-28 Score=222.42 Aligned_cols=245 Identities=11% Similarity=0.062 Sum_probs=153.1
Q ss_pred CCeeEEEecCC-CCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccC----------cHHH
Q 018555 82 KPVQVAFKTGD-YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ----------DAME 150 (354)
Q Consensus 82 ~~~~~~~~~~~-~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~----------~~~d 150 (354)
+...++|...+ .+++|||+||++ .+...|..++..|++ .|+|+++|+ +|||.|+.+. ..++
T Consensus 16 ~~~~i~y~~~G~~~~~vlllHG~~---~~~~~w~~~~~~L~~-~~~vi~~Dl----pG~G~S~~~~~~~~~~~~~~~~~~ 87 (294)
T PLN02824 16 KGYNIRYQRAGTSGPALVLVHGFG---GNADHWRKNTPVLAK-SHRVYAIDL----LGYGYSDKPNPRSAPPNSFYTFET 87 (294)
T ss_pred cCeEEEEEEcCCCCCeEEEECCCC---CChhHHHHHHHHHHh-CCeEEEEcC----CCCCCCCCCccccccccccCCHHH
Confidence 34556665433 468999999999 788889999999997 689999999 7999997542 3455
Q ss_pred HHHHHHHHHhhCCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhhc-----c---hhHHHHHH--
Q 018555 151 IDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRAT-----L---PETAAMID-- 219 (354)
Q Consensus 151 l~~~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~~-----~---~~~~~~~~-- 219 (354)
+.+.+..+.++++.++++||||||||.+++.+|.+ |+ +|+++|++++......... . ......+.
T Consensus 88 ~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~----~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (294)
T PLN02824 88 WGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPE----LVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRET 163 (294)
T ss_pred HHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChh----heeEEEEECCCcccccccccchhhhHHHHHHHHHHhch
Confidence 55555555555667999999999999999999998 98 9999999987542110000 0 00000000
Q ss_pred -HHHHHHhcCCC----CCCCCCCCCC---CCcchHHHHhhhhcccCCCccc---cCCCChHHHHHHhcCCCCCcEEEEee
Q 018555 220 -LASSMIREGRG----SELMPREADP---CSPITAQRYHSLCAYMGDDDMF---SSDLSDDQLKQRLGHMANTPCQVIFS 288 (354)
Q Consensus 220 -~~~~~~~~~~~----~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~~l~~i~~~PvLvi~G 288 (354)
..+.+...... ..++...+.. ........+............+ ............++++++ |+|+|+|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-P~lvi~G 242 (294)
T PLN02824 164 AVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKC-PVLIAWG 242 (294)
T ss_pred hHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCC-CeEEEEe
Confidence 00000000000 0000000000 0000000010000000000000 000011112356789999 9999999
Q ss_pred CCCCCCCchhcHHHHHHHHHHHcCCCeEEEecCCCccc-CccHHHHHHHHHHHHHhh
Q 018555 289 MADEYVPEYVDKKALVERLCRAMGGAEKVEIEHGIHSL-SNRVKEAVQAIIDFVKRE 344 (354)
Q Consensus 289 ~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~-~~~p~~~~~~i~~Fl~~~ 344 (354)
++|.++|.. ..+.+.+..+++++++++++||++ .++|++|++.|.+|++++
T Consensus 243 ~~D~~~~~~-----~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 243 EKDPWEPVE-----LGRAYANFDAVEDFIVLPGVGHCPQDEAPELVNPLIESFVARH 294 (294)
T ss_pred cCCCCCChH-----HHHHHHhcCCccceEEeCCCCCChhhhCHHHHHHHHHHHHhcC
Confidence 999999987 667777777888999999999999 899999999999999763
No 6
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.96 E-value=2.5e-27 Score=217.68 Aligned_cols=244 Identities=14% Similarity=0.121 Sum_probs=153.9
Q ss_pred CCeeEEEecCCCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccC---cHHHHHHHHHHH
Q 018555 82 KPVQVAFKTGDYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ---DAMEIDQLISYL 158 (354)
Q Consensus 82 ~~~~~~~~~~~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~---~~~dl~~~i~~l 158 (354)
++..+.|...+.+++|||+||++ .+...|..+++.|++ .|+|+++|+ +|||.|+.+. ..++..+.+..+
T Consensus 15 ~g~~i~y~~~G~g~~vvllHG~~---~~~~~w~~~~~~L~~-~~~via~D~----~G~G~S~~~~~~~~~~~~a~dl~~l 86 (295)
T PRK03592 15 LGSRMAYIETGEGDPIVFLHGNP---TSSYLWRNIIPHLAG-LGRCLAPDL----IGMGASDKPDIDYTFADHARYLDAW 86 (295)
T ss_pred CCEEEEEEEeCCCCEEEEECCCC---CCHHHHHHHHHHHhh-CCEEEEEcC----CCCCCCCCCCCCCCHHHHHHHHHHH
Confidence 44556676656678999999999 788889999999997 469999999 7999997653 344444444444
Q ss_pred HhhCCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhhcc-hhHHHHHHHHHHHHhcCC-CC----
Q 018555 159 INKDNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRATL-PETAAMIDLASSMIREGR-GS---- 231 (354)
Q Consensus 159 ~~~~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~---- 231 (354)
.+.++.++++|+||||||.+|+.++.+ |+ +|+++|++++...+...... ....... .. +.... ..
T Consensus 87 l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~----~v~~lil~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~ 158 (295)
T PRK03592 87 FDALGLDDVVLVGHDWGSALGFDWAARHPD----RVRGIAFMEAIVRPMTWDDFPPAVRELF---QA-LRSPGEGEEMVL 158 (295)
T ss_pred HHHhCCCCeEEEEECHHHHHHHHHHHhChh----heeEEEEECCCCCCcchhhcchhHHHHH---HH-HhCccccccccc
Confidence 555667999999999999999999999 88 99999999974432111101 1111111 11 11100 00
Q ss_pred -------CCCCCCCCC-CCcchHHHHhhhhccc-C---CCccccC--------C--CChHHHHHHhcCCCCCcEEEEeeC
Q 018555 232 -------ELMPREADP-CSPITAQRYHSLCAYM-G---DDDMFSS--------D--LSDDQLKQRLGHMANTPCQVIFSM 289 (354)
Q Consensus 232 -------~~~~~~~~~-~~~~~~~~~~~~~~~~-~---~~~~~~~--------~--l~~~~~~~~l~~i~~~PvLvi~G~ 289 (354)
.+....... ..+.....+....... . ...++.. . .........+.++++ |+|+|+|+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-P~lii~G~ 237 (295)
T PRK03592 159 EENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDV-PKLLINAE 237 (295)
T ss_pred chhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCC-CeEEEecc
Confidence 000000000 0000000010000000 0 0000000 0 001223456788999 99999999
Q ss_pred CCCCCCchhcHHHHHHHHHHHcCCCeEEEecCCCccc-CccHHHHHHHHHHHHHhhCC
Q 018555 290 ADEYVPEYVDKKALVERLCRAMGGAEKVEIEHGIHSL-SNRVKEAVQAIIDFVKREGP 346 (354)
Q Consensus 290 ~D~~vp~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~-~~~p~~~~~~i~~Fl~~~~~ 346 (354)
+|.++++.. ..+.+.+..+++++++++++||++ .++|++|++.|.+|+++..+
T Consensus 238 ~D~~~~~~~----~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~~~ 291 (295)
T PRK03592 238 PGAILTTGA----IRDWCRSWPNQLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRLRL 291 (295)
T ss_pred CCcccCcHH----HHHHHHHhhhhcceeeccCcchhhhhcCHHHHHHHHHHHHHHhcc
Confidence 999995441 333344556889999999999999 89999999999999998764
No 7
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.96 E-value=1.4e-27 Score=220.20 Aligned_cols=243 Identities=11% Similarity=0.066 Sum_probs=150.1
Q ss_pred eeEEEecCC--CCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccC-----cHHHHHHHHH
Q 018555 84 VQVAFKTGD--YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ-----DAMEIDQLIS 156 (354)
Q Consensus 84 ~~~~~~~~~--~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~-----~~~dl~~~i~ 156 (354)
..++|...+ .+|+|||+||++ .+...|..+++.|.+.||+|+++|+ +|||.|+.+. ..+++.+.+.
T Consensus 34 ~~i~y~~~G~~~~~~lvliHG~~---~~~~~w~~~~~~L~~~gy~vi~~Dl----~G~G~S~~~~~~~~~~~~~~a~~l~ 106 (302)
T PRK00870 34 LRMHYVDEGPADGPPVLLLHGEP---SWSYLYRKMIPILAAAGHRVIAPDL----IGFGRSDKPTRREDYTYARHVEWMR 106 (302)
T ss_pred EEEEEEecCCCCCCEEEEECCCC---CchhhHHHHHHHHHhCCCEEEEECC----CCCCCCCCCCCcccCCHHHHHHHHH
Confidence 556666533 468999999998 7788899999999877999999999 7999997542 2345555555
Q ss_pred HHHhhCCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhhcchhHHHHHHH--------HHHHHhc
Q 018555 157 YLINKDNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRATLPETAAMIDL--------ASSMIRE 227 (354)
Q Consensus 157 ~l~~~~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~--------~~~~~~~ 227 (354)
.+.++++.++++|+||||||.+++.++.+ |+ +|+++|++++...............+... ....+..
T Consensus 107 ~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (302)
T PRK00870 107 SWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPD----RFARLVVANTGLPTGDGPMPDAFWAWRAFSQYSPVLPVGRLVNG 182 (302)
T ss_pred HHHHHcCCCCEEEEEEChHHHHHHHHHHhChh----heeEEEEeCCCCCCccccchHHHhhhhcccccCchhhHHHHhhc
Confidence 55555678899999999999999999998 88 99999999864211100000000000000 0000000
Q ss_pred CCCCCCC----CCCCCCCCcchHHHHhhhhcccCCCccccCC-CChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHH
Q 018555 228 GRGSELM----PREADPCSPITAQRYHSLCAYMGDDDMFSSD-LSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKA 302 (354)
Q Consensus 228 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~ 302 (354)
.....+. ............................... .........+.++++ |+|+|+|++|.++|..
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-P~lii~G~~D~~~~~~----- 256 (302)
T PRK00870 183 GTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDK-PFLTAFSDSDPITGGG----- 256 (302)
T ss_pred cccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCC-ceEEEecCCCCcccCc-----
Confidence 0000000 0000000000000000000000000000000 011123356789999 9999999999999876
Q ss_pred HHHHHHHHcCCCe---EEEecCCCccc-CccHHHHHHHHHHHHHhh
Q 018555 303 LVERLCRAMGGAE---KVEIEHGIHSL-SNRVKEAVQAIIDFVKRE 344 (354)
Q Consensus 303 ~~~~~~~~~~~~~---~~~i~~agH~~-~~~p~~~~~~i~~Fl~~~ 344 (354)
. +.+.+.+++++ +++++++||++ .++|++|++.|.+||++.
T Consensus 257 ~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 257 D-AILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred h-HHHHhhcccccccceeeecCCCccchhhChHHHHHHHHHHHhcC
Confidence 4 66777788776 78999999999 899999999999999764
No 8
>PLN02965 Probable pheophorbidase
Probab=99.96 E-value=7.5e-28 Score=216.59 Aligned_cols=230 Identities=17% Similarity=0.146 Sum_probs=145.4
Q ss_pred cEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccC----cHHHHHHHHHHHHhhCCC-CcEEE
Q 018555 95 QQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ----DAMEIDQLISYLINKDNS-EGVVL 169 (354)
Q Consensus 95 p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~----~~~dl~~~i~~l~~~~~~-~~~~L 169 (354)
-+|||+||++ .+...|+.++..|++.||+|+++|+ +|||.|+.+. ..+++.+.+..+.+.++. ++++|
T Consensus 4 ~~vvllHG~~---~~~~~w~~~~~~L~~~~~~via~Dl----~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~l 76 (255)
T PLN02965 4 IHFVFVHGAS---HGAWCWYKLATLLDAAGFKSTCVDL----TGAGISLTDSNTVSSSDQYNRPLFALLSDLPPDHKVIL 76 (255)
T ss_pred eEEEEECCCC---CCcCcHHHHHHHHhhCCceEEEecC----CcCCCCCCCccccCCHHHHHHHHHHHHHhcCCCCCEEE
Confidence 3599999999 7788899999999767999999999 7999997432 244554444444445555 59999
Q ss_pred EEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhhcchhHHHHHHHHHHHHh----cCCCCCC----CCCCC--
Q 018555 170 LGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLASSMIR----EGRGSEL----MPREA-- 238 (354)
Q Consensus 170 vGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~----~~~~~-- 238 (354)
|||||||.+++.++.+ |+ +|+++|++++......................... ....... .....
T Consensus 77 vGhSmGG~ia~~~a~~~p~----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (255)
T PLN02965 77 VGHSIGGGSVTEALCKFTD----KISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVR 152 (255)
T ss_pred EecCcchHHHHHHHHhCch----heeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHH
Confidence 9999999999999998 88 99999999875321110000000000000000000 0000000 00000
Q ss_pred ---CCCCcchHHHHh-hhhcccCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCC
Q 018555 239 ---DPCSPITAQRYH-SLCAYMGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGGA 314 (354)
Q Consensus 239 ---~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~ 314 (354)
....+.....+. ..........+ .........+.++++ |+|+|+|++|.++|+. ..+.+.+.+|++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~v-P~lvi~g~~D~~~~~~-----~~~~~~~~~~~a 222 (255)
T PLN02965 153 HYYYNQSPLEDYTLSSKLLRPAPVRAF----QDLDKLPPNPEAEKV-PRVYIKTAKDNLFDPV-----RQDVMVENWPPA 222 (255)
T ss_pred HHHhcCCCHHHHHHHHHhcCCCCCcch----hhhhhccchhhcCCC-CEEEEEcCCCCCCCHH-----HHHHHHHhCCcc
Confidence 000000000000 00000000000 001112234567999 9999999999999987 778889999999
Q ss_pred eEEEecCCCccc-CccHHHHHHHHHHHHHhhC
Q 018555 315 EKVEIEHGIHSL-SNRVKEAVQAIIDFVKREG 345 (354)
Q Consensus 315 ~~~~i~~agH~~-~~~p~~~~~~i~~Fl~~~~ 345 (354)
++++++++||++ .++|++|++.|.+|++.+.
T Consensus 223 ~~~~i~~~GH~~~~e~p~~v~~~l~~~~~~~~ 254 (255)
T PLN02965 223 QTYVLEDSDHSAFFSVPTTLFQYLLQAVSSLQ 254 (255)
T ss_pred eEEEecCCCCchhhcCHHHHHHHHHHHHHHhc
Confidence 999999999999 8999999999999998765
No 9
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.95 E-value=1.3e-27 Score=214.91 Aligned_cols=223 Identities=15% Similarity=0.201 Sum_probs=144.8
Q ss_pred CcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhhCCCCcEEEEEEC
Q 018555 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLGHS 173 (354)
Q Consensus 94 ~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~~~~~~~~LvGhS 173 (354)
.|+|||+||++ .+...|..++..|.+ .|+|+++|+ +|||.|+.... ..+.++++.+.+ +..++++|||||
T Consensus 13 ~~~ivllHG~~---~~~~~w~~~~~~L~~-~~~vi~~Dl----~G~G~S~~~~~-~~~~~~~~~l~~-~~~~~~~lvGhS 82 (256)
T PRK10349 13 NVHLVLLHGWG---LNAEVWRCIDEELSS-HFTLHLVDL----PGFGRSRGFGA-LSLADMAEAVLQ-QAPDKAIWLGWS 82 (256)
T ss_pred CCeEEEECCCC---CChhHHHHHHHHHhc-CCEEEEecC----CCCCCCCCCCC-CCHHHHHHHHHh-cCCCCeEEEEEC
Confidence 35799999999 788899999999986 799999999 79999875432 234455555543 456899999999
Q ss_pred hhHHHHHHHHHh-cccccccccEEEEecccCchHhh----hcchh-HHHH---H-----HHHHHHHhcCCCCCCCCCCCC
Q 018555 174 TGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYR----ATLPE-TAAM---I-----DLASSMIREGRGSELMPREAD 239 (354)
Q Consensus 174 ~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~----~~~~~-~~~~---~-----~~~~~~~~~~~~~~~~~~~~~ 239 (354)
|||.+|+.+|.+ |+ +|+++|++++....... ..... ...+ + .....++.... ...
T Consensus 83 ~Gg~ia~~~a~~~p~----~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--- 151 (256)
T PRK10349 83 LGGLVASQIALTHPE----RVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQT----MGT--- 151 (256)
T ss_pred HHHHHHHHHHHhChH----hhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHH----ccC---
Confidence 999999999988 88 99999999874321100 00000 0000 0 00111110000 000
Q ss_pred CCCcchHHHHhhhhcccCCCcc--cc---CCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCC
Q 018555 240 PCSPITAQRYHSLCAYMGDDDM--FS---SDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGGA 314 (354)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~--~~---~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~ 314 (354)
.........+............ .. ..+...+..+.+.++++ |+|+|+|++|.++|.. ..+.+.+.++++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-P~lii~G~~D~~~~~~-----~~~~~~~~i~~~ 225 (256)
T PRK10349 152 ETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSM-PFLRLYGYLDGLVPRK-----VVPMLDKLWPHS 225 (256)
T ss_pred chHHHHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCC-CeEEEecCCCccCCHH-----HHHHHHHhCCCC
Confidence 0000000011000000000000 00 00011123467889999 9999999999999887 677888889999
Q ss_pred eEEEecCCCccc-CccHHHHHHHHHHHHHh
Q 018555 315 EKVEIEHGIHSL-SNRVKEAVQAIIDFVKR 343 (354)
Q Consensus 315 ~~~~i~~agH~~-~~~p~~~~~~i~~Fl~~ 343 (354)
++++++++||++ .++|++|++.|.+|-++
T Consensus 226 ~~~~i~~~gH~~~~e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 226 ESYIFAKAAHAPFISHPAEFCHLLVALKQR 255 (256)
T ss_pred eEEEeCCCCCCccccCHHHHHHHHHHHhcc
Confidence 999999999999 89999999999999764
No 10
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.95 E-value=1.5e-26 Score=210.75 Aligned_cols=236 Identities=15% Similarity=0.160 Sum_probs=145.6
Q ss_pred eeEEEecCCCCcEEEEECCCCCCCCccccHHH---HHHHHhhCCcEEEEEcccccCCCCCCCCccC--c--HHHHHHHHH
Q 018555 84 VQVAFKTGDYQQQVIFIGGLTDGFFATEYLEP---LAIALDKERWSLVQFLMTSSYTGYGTSSLQQ--D--AMEIDQLIS 156 (354)
Q Consensus 84 ~~~~~~~~~~~p~vIliHG~~~~~~~~~~~~~---la~~La~~g~~Via~D~R~~~~G~G~S~~~~--~--~~dl~~~i~ 156 (354)
..++|...+.+|+|||+||++ .+...|.. .+..|.+.||+|+++|+ +|||.|+... . .....+.+.
T Consensus 20 ~~~~y~~~g~~~~ivllHG~~---~~~~~~~~~~~~~~~l~~~~~~vi~~D~----~G~G~S~~~~~~~~~~~~~~~~l~ 92 (282)
T TIGR03343 20 FRIHYNEAGNGEAVIMLHGGG---PGAGGWSNYYRNIGPFVDAGYRVILKDS----PGFNKSDAVVMDEQRGLVNARAVK 92 (282)
T ss_pred eeEEEEecCCCCeEEEECCCC---CchhhHHHHHHHHHHHHhCCCEEEEECC----CCCCCCCCCcCcccccchhHHHHH
Confidence 456676656678999999998 45444543 34455556999999999 7999997531 1 111222333
Q ss_pred HHHhhCCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHh-hhcch--hHHHHHH--------HHHHH
Q 018555 157 YLINKDNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREY-RATLP--ETAAMID--------LASSM 224 (354)
Q Consensus 157 ~l~~~~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~-~~~~~--~~~~~~~--------~~~~~ 224 (354)
.+.+.++.++++|+||||||.+++.++.+ |+ +|+++|++++...... ....+ ......+ ....+
T Consensus 93 ~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (282)
T TIGR03343 93 GLMDALDIEKAHLVGNSMGGATALNFALEYPD----RIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQM 168 (282)
T ss_pred HHHHHcCCCCeeEEEECchHHHHHHHHHhChH----hhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHH
Confidence 33344568999999999999999999998 88 9999999987532110 00000 0000000 00001
Q ss_pred HhcCCCCCCCCCCCCCCCcchHH-HHhhhhccc-CCCccc----cCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchh
Q 018555 225 IREGRGSELMPREADPCSPITAQ-RYHSLCAYM-GDDDMF----SSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYV 298 (354)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~----~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~ 298 (354)
.... ...... ....... .+....... ....+. .......+....+.++++ |+|+|+|++|.++|+.
T Consensus 169 ~~~~----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-Pvlli~G~~D~~v~~~- 240 (282)
T TIGR03343 169 LNVF----LFDQSL--ITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKA-KTLVTWGRDDRFVPLD- 240 (282)
T ss_pred HhhC----ccCccc--CcHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCC-CEEEEEccCCCcCCch-
Confidence 1000 000000 0000000 000000000 000000 001112233467889999 9999999999999987
Q ss_pred cHHHHHHHHHHHcCCCeEEEecCCCccc-CccHHHHHHHHHHHHH
Q 018555 299 DKKALVERLCRAMGGAEKVEIEHGIHSL-SNRVKEAVQAIIDFVK 342 (354)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~i~~agH~~-~~~p~~~~~~i~~Fl~ 342 (354)
..+.+.+.+|++++++++++||++ .++|++|++.|.+||.
T Consensus 241 ----~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 241 ----HGLKLLWNMPDAQLHVFSRCGHWAQWEHADAFNRLVIDFLR 281 (282)
T ss_pred ----hHHHHHHhCCCCEEEEeCCCCcCCcccCHHHHHHHHHHHhh
Confidence 778888889999999999999999 8999999999999996
No 11
>PHA02857 monoglyceride lipase; Provisional
Probab=99.95 E-value=1.1e-25 Score=204.68 Aligned_cols=230 Identities=14% Similarity=0.100 Sum_probs=145.2
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccC--------cHHHHHHHHHHHHhhCC
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ--------DAMEIDQLISYLINKDN 163 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~--------~~~dl~~~i~~l~~~~~ 163 (354)
..++.|||+||++ .+...|+.+++.|+++||+|+++|+ +|||.|+... .++|+.+.++.+.+...
T Consensus 23 ~~~~~v~llHG~~---~~~~~~~~~~~~l~~~g~~via~D~----~G~G~S~~~~~~~~~~~~~~~d~~~~l~~~~~~~~ 95 (276)
T PHA02857 23 YPKALVFISHGAG---EHSGRYEELAENISSLGILVFSHDH----IGHGRSNGEKMMIDDFGVYVRDVVQHVVTIKSTYP 95 (276)
T ss_pred CCCEEEEEeCCCc---cccchHHHHHHHHHhCCCEEEEccC----CCCCCCCCccCCcCCHHHHHHHHHHHHHHHHhhCC
Confidence 4466777779999 7888999999999988999999999 7999986432 13445555555544455
Q ss_pred CCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhhcchhHHHHHHHHHHHHhcCCCCCCCCCCCCC-C
Q 018555 164 SEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLASSMIREGRGSELMPREADP-C 241 (354)
Q Consensus 164 ~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 241 (354)
..+++|+||||||.+|+.++.+ |+ +|+++|+++|....+.... ...+.......... .......... .
T Consensus 96 ~~~~~lvG~S~GG~ia~~~a~~~p~----~i~~lil~~p~~~~~~~~~---~~~~~~~~~~~~~~---~~~~~~~~~~~~ 165 (276)
T PHA02857 96 GVPVFLLGHSMGATISILAAYKNPN----LFTAMILMSPLVNAEAVPR---LNLLAAKLMGIFYP---NKIVGKLCPESV 165 (276)
T ss_pred CCCEEEEEcCchHHHHHHHHHhCcc----ccceEEEeccccccccccH---HHHHHHHHHHHhCC---CCccCCCCHhhc
Confidence 5789999999999999999988 87 8999999998654321110 01111111111110 0111000000 0
Q ss_pred CcchHHHHhhhhcccCC----C-ccccCCC-ChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHc-CCC
Q 018555 242 SPITAQRYHSLCAYMGD----D-DMFSSDL-SDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAM-GGA 314 (354)
Q Consensus 242 ~~~~~~~~~~~~~~~~~----~-~~~~~~l-~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~-~~~ 314 (354)
................. . .+..... ........+.++++ |+|+|+|++|.++|.. ..+.+.+.+ +++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-Pvliv~G~~D~i~~~~-----~~~~l~~~~~~~~ 239 (276)
T PHA02857 166 SRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKT-PILILQGTNNEISDVS-----GAYYFMQHANCNR 239 (276)
T ss_pred cCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCC-CEEEEecCCCCcCChH-----HHHHHHHHccCCc
Confidence 00000000000000000 0 0000000 01233467889999 9999999999999988 666776665 468
Q ss_pred eEEEecCCCccc-CccH---HHHHHHHHHHHHhh
Q 018555 315 EKVEIEHGIHSL-SNRV---KEAVQAIIDFVKRE 344 (354)
Q Consensus 315 ~~~~i~~agH~~-~~~p---~~~~~~i~~Fl~~~ 344 (354)
++++++++||.+ .+++ +++.+.|.+||.+.
T Consensus 240 ~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 240 EIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred eEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 899999999999 5544 57999999999875
No 12
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.94 E-value=3.6e-26 Score=209.10 Aligned_cols=242 Identities=13% Similarity=0.150 Sum_probs=148.7
Q ss_pred CeeEEEecCCCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccC----cHHHHHHHHHHH
Q 018555 83 PVQVAFKTGDYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ----DAMEIDQLISYL 158 (354)
Q Consensus 83 ~~~~~~~~~~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~----~~~dl~~~i~~l 158 (354)
...++|...+.+++|||+||++ .....|..++..|.+ +|+|+++|+ +|||.|+.+. ..++..+.+..+
T Consensus 23 ~~~i~y~~~G~~~~iv~lHG~~---~~~~~~~~~~~~l~~-~~~vi~~D~----~G~G~S~~~~~~~~~~~~~~~~~~~~ 94 (286)
T PRK03204 23 RGRIHYIDEGTGPPILLCHGNP---TWSFLYRDIIVALRD-RFRCVAPDY----LGFGLSERPSGFGYQIDEHARVIGEF 94 (286)
T ss_pred CcEEEEEECCCCCEEEEECCCC---ccHHHHHHHHHHHhC-CcEEEEECC----CCCCCCCCCCccccCHHHHHHHHHHH
Confidence 3456666555678999999998 666779999999986 799999999 7999997543 356777777777
Q ss_pred HhhCCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhhcchhHHHHHH---HHHHHHhcC-CCCCC
Q 018555 159 INKDNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRATLPETAAMID---LASSMIREG-RGSEL 233 (354)
Q Consensus 159 ~~~~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~ 233 (354)
.++++.++++|+||||||.+++.++.+ |+ +|+++|++++.................. ....++... ....+
T Consensus 95 ~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (286)
T PRK03204 95 VDHLGLDRYLSMGQDWGGPISMAVAVERAD----RVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQYAILRRNFFVERL 170 (286)
T ss_pred HHHhCCCCEEEEEECccHHHHHHHHHhChh----heeEEEEECccccCCCchhHHHHHHHhccccchhhhhhhhHHHHHh
Confidence 777788999999999999999999988 88 9999999876532110000000000000 000000000 00000
Q ss_pred CCCCCC-CCCcchHHHHhhhhcccC-CC------ccccCCC-ChHHHHHHhcC--CCCCcEEEEeeCCCCCCCchhcHHH
Q 018555 234 MPREAD-PCSPITAQRYHSLCAYMG-DD------DMFSSDL-SDDQLKQRLGH--MANTPCQVIFSMADEYVPEYVDKKA 302 (354)
Q Consensus 234 ~~~~~~-~~~~~~~~~~~~~~~~~~-~~------~~~~~~l-~~~~~~~~l~~--i~~~PvLvi~G~~D~~vp~~~~~~~ 302 (354)
++.... .........+........ .. ..+.... ....+...+.+ +++ |+|+|+|++|.++++. .
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-PtliI~G~~D~~~~~~----~ 245 (286)
T PRK03204 171 IPAGTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTK-PTLLVWGMKDVAFRPK----T 245 (286)
T ss_pred ccccccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCC-CeEEEecCCCcccCcH----H
Confidence 100000 000000000100000000 00 0000000 00111111211 278 9999999999988654 1
Q ss_pred HHHHHHHHcCCCeEEEecCCCccc-CccHHHHHHHHHHHH
Q 018555 303 LVERLCRAMGGAEKVEIEHGIHSL-SNRVKEAVQAIIDFV 341 (354)
Q Consensus 303 ~~~~~~~~~~~~~~~~i~~agH~~-~~~p~~~~~~i~~Fl 341 (354)
..+.+.+.+|++++++|+++||++ .++|++|++.|.+||
T Consensus 246 ~~~~~~~~ip~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 246 ILPRLRATFPDHVLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred HHHHHHHhcCCCeEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 467888899999999999999999 899999999999997
No 13
>PRK06489 hypothetical protein; Provisional
Probab=99.94 E-value=1.2e-25 Score=212.32 Aligned_cols=241 Identities=15% Similarity=0.080 Sum_probs=147.0
Q ss_pred CCeeEEEecCCC---------CcEEEEECCCCCCCCccccHH--HHHHHH--------hhCCcEEEEEcccccCCCCCCC
Q 018555 82 KPVQVAFKTGDY---------QQQVIFIGGLTDGFFATEYLE--PLAIAL--------DKERWSLVQFLMTSSYTGYGTS 142 (354)
Q Consensus 82 ~~~~~~~~~~~~---------~p~vIliHG~~~~~~~~~~~~--~la~~L--------a~~g~~Via~D~R~~~~G~G~S 142 (354)
++..++|...+. +|+|||+||++ ++...|. .+.+.| + ++|+||++|+ +|||.|
T Consensus 48 ~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~---~~~~~~~~~~~~~~l~~~~~~l~~-~~~~Via~Dl----~GhG~S 119 (360)
T PRK06489 48 PELRLHYTTLGTPHRNADGEIDNAVLVLHGTG---GSGKSFLSPTFAGELFGPGQPLDA-SKYFIILPDG----IGHGKS 119 (360)
T ss_pred CCceEEEEecCCCCcccccCCCCeEEEeCCCC---CchhhhccchhHHHhcCCCCcccc-cCCEEEEeCC----CCCCCC
Confidence 345666654333 68999999999 5554553 555554 4 4899999999 799999
Q ss_pred CccC----------cHHHHHH-HHHHHHhhCCCCcEE-EEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhh
Q 018555 143 SLQQ----------DAMEIDQ-LISYLINKDNSEGVV-LLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRA 209 (354)
Q Consensus 143 ~~~~----------~~~dl~~-~i~~l~~~~~~~~~~-LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~ 209 (354)
+.+. ..+++.+ +++.+.+++++++++ |+||||||++|+.++.+ |+ +|+++|++++........
T Consensus 120 ~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~----~V~~LVLi~s~~~~~~~~ 195 (360)
T PRK06489 120 SKPSDGLRAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPD----FMDALMPMASQPTEMSGR 195 (360)
T ss_pred CCCCcCCCCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCch----hhheeeeeccCcccccHH
Confidence 7542 2344443 334455567788885 89999999999999999 99 999999998643211000
Q ss_pred cchhHHHHHHHHHHHHhcCCCCCCCCCCCC---------------------------CCCcchHHHHhhh----hcccCC
Q 018555 210 TLPETAAMIDLASSMIREGRGSELMPREAD---------------------------PCSPITAQRYHSL----CAYMGD 258 (354)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~----~~~~~~ 258 (354)
... ..... ...+.... .+...... .........+... ......
T Consensus 196 ~~~-~~~~~---~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (360)
T PRK06489 196 NWM-WRRML---IESIRNDP--AWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADA 269 (360)
T ss_pred HHH-HHHHH---HHHHHhCC--CCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCH
Confidence 000 00000 00000000 00000000 0000000000000 000000
Q ss_pred Ccccc--CCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHH--HHHHHHcCCCeEEEecCC----CcccCccH
Q 018555 259 DDMFS--SDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALV--ERLCRAMGGAEKVEIEHG----IHSLSNRV 330 (354)
Q Consensus 259 ~~~~~--~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~--~~~~~~~~~~~~~~i~~a----gH~~~~~p 330 (354)
..++. ......+....+.+|++ |+|+|+|++|.++|+. .. +.+.+.+|++++++|++| ||.++++|
T Consensus 270 ~~~~~~~~~~~~~d~~~~L~~I~~-PvLvI~G~~D~~~p~~-----~~~~~~la~~ip~a~l~~i~~a~~~~GH~~~e~P 343 (360)
T PRK06489 270 NDFLYQWDSSRDYNPSPDLEKIKA-PVLAINSADDERNPPE-----TGVMEAALKRVKHGRLVLIPASPETRGHGTTGSA 343 (360)
T ss_pred HHHHHHHHHhhccChHHHHHhCCC-CEEEEecCCCcccChh-----hHHHHHHHHhCcCCeEEEECCCCCCCCcccccCH
Confidence 00000 00011123467889999 9999999999999877 33 677888999999999996 99998899
Q ss_pred HHHHHHHHHHHHhhCC
Q 018555 331 KEAVQAIIDFVKREGP 346 (354)
Q Consensus 331 ~~~~~~i~~Fl~~~~~ 346 (354)
++|++.|.+||+++.+
T Consensus 344 ~~~~~~i~~FL~~~~~ 359 (360)
T PRK06489 344 KFWKAYLAEFLAQVPK 359 (360)
T ss_pred HHHHHHHHHHHHhccc
Confidence 9999999999987653
No 14
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.94 E-value=1.3e-25 Score=211.17 Aligned_cols=233 Identities=15% Similarity=0.209 Sum_probs=143.8
Q ss_pred CCCcEEEEECCCCCCCCccc-cHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccC----c----HHHHHHHHHHHHhh-
Q 018555 92 DYQQQVIFIGGLTDGFFATE-YLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ----D----AMEIDQLISYLINK- 161 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~-~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~----~----~~dl~~~i~~l~~~- 161 (354)
..+++|||+||++ .+.. +|+.++..|+++||+|+++|+ +|||.|+... . ++|+.++++.+...
T Consensus 85 ~~~~~iv~lHG~~---~~~~~~~~~~~~~l~~~g~~v~~~D~----~G~G~S~~~~~~~~~~~~~~~dv~~~l~~l~~~~ 157 (349)
T PLN02385 85 RPKAAVCFCHGYG---DTCTFFFEGIARKIASSGYGVFAMDY----PGFGLSEGLHGYIPSFDDLVDDVIEHYSKIKGNP 157 (349)
T ss_pred CCCeEEEEECCCC---CccchHHHHHHHHHHhCCCEEEEecC----CCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHhcc
Confidence 3568999999998 4444 578999999988999999999 7999987431 2 34555555555431
Q ss_pred -CCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhh-cchhHHHHHHHHHHHHhcCCCCCCCCCCC
Q 018555 162 -DNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRA-TLPETAAMIDLASSMIREGRGSELMPREA 238 (354)
Q Consensus 162 -~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (354)
+...+++|+||||||.+++.++.+ |+ +|+++||++|........ .................. ..+.+...
T Consensus 158 ~~~~~~~~LvGhSmGG~val~~a~~~p~----~v~glVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~p~---~~~~~~~~ 230 (349)
T PLN02385 158 EFRGLPSFLFGQSMGGAVALKVHLKQPN----AWDGAILVAPMCKIADDVVPPPLVLQILILLANLLPK---AKLVPQKD 230 (349)
T ss_pred ccCCCCEEEEEeccchHHHHHHHHhCcc----hhhheeEecccccccccccCchHHHHHHHHHHHHCCC---ceecCCCc
Confidence 233479999999999999999988 88 999999999865421110 000111111111111100 00010000
Q ss_pred -CC---CCcchHHHHhhh--hcccCCCcc--ccCCC-ChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHH
Q 018555 239 -DP---CSPITAQRYHSL--CAYMGDDDM--FSSDL-SDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCR 309 (354)
Q Consensus 239 -~~---~~~~~~~~~~~~--~~~~~~~~~--~~~~l-~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~ 309 (354)
.. .... ....... ........+ ....+ ........+.++++ |+|+|+|++|.++|.. ..+.+.+
T Consensus 231 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~-P~Lii~G~~D~vv~~~-----~~~~l~~ 303 (349)
T PLN02385 231 LAELAFRDLK-KRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSL-PLLILHGEADKVTDPS-----VSKFLYE 303 (349)
T ss_pred cccccccCHH-HHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCC-CEEEEEeCCCCccChH-----HHHHHHH
Confidence 00 0000 0000000 000000000 00000 01234456789999 9999999999999987 5666666
Q ss_pred Hc--CCCeEEEecCCCccc-CccHHH----HHHHHHHHHHhhC
Q 018555 310 AM--GGAEKVEIEHGIHSL-SNRVKE----AVQAIIDFVKREG 345 (354)
Q Consensus 310 ~~--~~~~~~~i~~agH~~-~~~p~~----~~~~i~~Fl~~~~ 345 (354)
.+ +++++++|+++||.+ .++|++ +++.|.+||++..
T Consensus 304 ~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 304 KASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHS 346 (349)
T ss_pred HcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhc
Confidence 65 568999999999999 678876 8888999998764
No 15
>PRK10749 lysophospholipase L2; Provisional
Probab=99.94 E-value=4.8e-25 Score=205.72 Aligned_cols=246 Identities=16% Similarity=0.184 Sum_probs=146.7
Q ss_pred CCeeEEEec---CCCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCcc-------------
Q 018555 82 KPVQVAFKT---GDYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQ------------- 145 (354)
Q Consensus 82 ~~~~~~~~~---~~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~------------- 145 (354)
++..++|.. ...+++|||+||++ .+...|..++..|.++||+|+++|+ +|||.|+.+
T Consensus 39 ~g~~l~~~~~~~~~~~~~vll~HG~~---~~~~~y~~~~~~l~~~g~~v~~~D~----~G~G~S~~~~~~~~~~~~~~~~ 111 (330)
T PRK10749 39 DDIPIRFVRFRAPHHDRVVVICPGRI---ESYVKYAELAYDLFHLGYDVLIIDH----RGQGRSGRLLDDPHRGHVERFN 111 (330)
T ss_pred CCCEEEEEEccCCCCCcEEEEECCcc---chHHHHHHHHHHHHHCCCeEEEEcC----CCCCCCCCCCCCCCcCccccHH
Confidence 444455542 24568999999998 6666788899888888999999999 799998632
Q ss_pred CcHHHHHHHHHHHHhhCCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhhcchhHHHHHHHHHHH
Q 018555 146 QDAMEIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLASSM 224 (354)
Q Consensus 146 ~~~~dl~~~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~~~ 224 (354)
..++|+..+++.+....+..+++|+||||||.+++.++.+ |+ .|+++|+++|...............+.......
T Consensus 112 ~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~----~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~ 187 (330)
T PRK10749 112 DYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPG----VFDAIALCAPMFGIVLPLPSWMARRILNWAEGH 187 (330)
T ss_pred HHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCC----CcceEEEECchhccCCCCCcHHHHHHHHHHHHh
Confidence 1134566666655444467899999999999999999988 88 999999999865321110000011111111111
Q ss_pred HhcCCC-----CCCCCCCCC-C---CCcchHHHHhhhhc-ccCC---Cccc---cCCC-ChHHHHHHhcCCCCCcEEEEe
Q 018555 225 IREGRG-----SELMPREAD-P---CSPITAQRYHSLCA-YMGD---DDMF---SSDL-SDDQLKQRLGHMANTPCQVIF 287 (354)
Q Consensus 225 ~~~~~~-----~~~~~~~~~-~---~~~~~~~~~~~~~~-~~~~---~~~~---~~~l-~~~~~~~~l~~i~~~PvLvi~ 287 (354)
...... ....+.... . ..+.....+..... .... ...+ ...+ ....+...+.++++ |+|+|+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-P~Lii~ 266 (330)
T PRK10749 188 PRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITT-PLLLLQ 266 (330)
T ss_pred cCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCC-CEEEEE
Confidence 000000 000000000 0 00101111111111 1100 0000 0000 01123356788999 999999
Q ss_pred eCCCCCCCchhcHHHHHHHHHHHc-------CCCeEEEecCCCccc-CccH---HHHHHHHHHHHHhh
Q 018555 288 SMADEYVPEYVDKKALVERLCRAM-------GGAEKVEIEHGIHSL-SNRV---KEAVQAIIDFVKRE 344 (354)
Q Consensus 288 G~~D~~vp~~~~~~~~~~~~~~~~-------~~~~~~~i~~agH~~-~~~p---~~~~~~i~~Fl~~~ 344 (354)
|++|.+++.. ..+.+.+.+ ++++++++||++|.+ .+.+ +.+.+.|.+||++.
T Consensus 267 G~~D~vv~~~-----~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 267 AEEERVVDNR-----MHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred eCCCeeeCHH-----HHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 9999999987 344444433 456899999999999 5554 67889999999764
No 16
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.94 E-value=6.2e-26 Score=200.48 Aligned_cols=221 Identities=15% Similarity=0.178 Sum_probs=142.1
Q ss_pred CcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhhCCCCcEEEEEEC
Q 018555 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLGHS 173 (354)
Q Consensus 94 ~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~~~~~~~~LvGhS 173 (354)
+|+|||+||++ .+...|..+++.|.+ +|+|+++|+ +|+|.|.... ..++.++++.+.+.. .++++|+|||
T Consensus 4 ~~~iv~~HG~~---~~~~~~~~~~~~l~~-~~~vi~~d~----~G~G~s~~~~-~~~~~~~~~~~~~~~-~~~~~lvG~S 73 (245)
T TIGR01738 4 NVHLVLIHGWG---MNAEVFRCLDEELSA-HFTLHLVDL----PGHGRSRGFG-PLSLADAAEAIAAQA-PDPAIWLGWS 73 (245)
T ss_pred CceEEEEcCCC---CchhhHHHHHHhhcc-CeEEEEecC----CcCccCCCCC-CcCHHHHHHHHHHhC-CCCeEEEEEc
Confidence 47999999999 788889999999986 899999999 7999986433 234555555554433 3789999999
Q ss_pred hhHHHHHHHHHh-cccccccccEEEEecccCchHhhh----c-chh-HHHHHH--------HHHHHHhcCCCCCCCCCCC
Q 018555 174 TGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRA----T-LPE-TAAMID--------LASSMIREGRGSELMPREA 238 (354)
Q Consensus 174 ~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~----~-~~~-~~~~~~--------~~~~~~~~~~~~~~~~~~~ 238 (354)
|||.+++.++.+ |+ +|+++|++++........ . ... ...+.. ....+.... .....
T Consensus 74 ~Gg~~a~~~a~~~p~----~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~- 144 (245)
T TIGR01738 74 LGGLVALHIAATHPD----RVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQ----TLGTP- 144 (245)
T ss_pred HHHHHHHHHHHHCHH----hhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHH----HhcCC-
Confidence 999999999998 88 899999987654221100 0 000 000000 000000000 00000
Q ss_pred CCCCcchHHHHhhhhcccCCC--cccc---CCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCC
Q 018555 239 DPCSPITAQRYHSLCAYMGDD--DMFS---SDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGG 313 (354)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~--~~~~---~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~ 313 (354)
........+.......... ..+. ..+...+....+.++++ |+|+|+|++|.++|.. ..+.+.+.+++
T Consensus 145 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-Pvlii~g~~D~~~~~~-----~~~~~~~~~~~ 216 (245)
T TIGR01738 145 --TARQDARALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISV-PFLRLYGYLDGLVPAK-----VVPYLDKLAPH 216 (245)
T ss_pred --ccchHHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCC-CEEEEeecCCcccCHH-----HHHHHHHhCCC
Confidence 0000001111100000000 0000 00111123356789999 9999999999999987 66777888899
Q ss_pred CeEEEecCCCccc-CccHHHHHHHHHHHH
Q 018555 314 AEKVEIEHGIHSL-SNRVKEAVQAIIDFV 341 (354)
Q Consensus 314 ~~~~~i~~agH~~-~~~p~~~~~~i~~Fl 341 (354)
+++++++++||++ .++|++|++.|.+|+
T Consensus 217 ~~~~~~~~~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 217 SELYIFAKAAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred CeEEEeCCCCCCccccCHHHHHHHHHhhC
Confidence 9999999999999 899999999999995
No 17
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.94 E-value=2.9e-25 Score=201.30 Aligned_cols=242 Identities=15% Similarity=0.136 Sum_probs=150.6
Q ss_pred CCeeEEEecCC--CCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccC----cHHHHHHHH
Q 018555 82 KPVQVAFKTGD--YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ----DAMEIDQLI 155 (354)
Q Consensus 82 ~~~~~~~~~~~--~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~----~~~dl~~~i 155 (354)
+...+.|...+ .+++|||+||++ ++...|..++..|++ +|+|+++|+ +|||.|+.+. ..+++.+.+
T Consensus 14 ~~~~~~~~~~g~~~~~~vv~~hG~~---~~~~~~~~~~~~l~~-~~~vi~~D~----~G~G~S~~~~~~~~~~~~~~~~l 85 (278)
T TIGR03056 14 GPFHWHVQDMGPTAGPLLLLLHGTG---ASTHSWRDLMPPLAR-SFRVVAPDL----PGHGFTRAPFRFRFTLPSMAEDL 85 (278)
T ss_pred CCEEEEEEecCCCCCCeEEEEcCCC---CCHHHHHHHHHHHhh-CcEEEeecC----CCCCCCCCccccCCCHHHHHHHH
Confidence 34445555433 468999999999 778889999999986 899999999 7999987543 345555555
Q ss_pred HHHHhhCCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhh-h--cchhHHHHHH---HHHHHHhc-
Q 018555 156 SYLINKDNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYR-A--TLPETAAMID---LASSMIRE- 227 (354)
Q Consensus 156 ~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~-~--~~~~~~~~~~---~~~~~~~~- 227 (354)
..+.+.++.++++|+||||||.+++.++.+ |+ +++++|++++....... . ..+....... ....+...
T Consensus 86 ~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~----~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (278)
T TIGR03056 86 SALCAAEGLSPDGVIGHSAGAAIALRLALDGPV----TPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSRG 161 (278)
T ss_pred HHHHHHcCCCCceEEEECccHHHHHHHHHhCCc----ccceEEEEcCcccccccccccccchhhHhhhhcccchHHHHhh
Confidence 555555667899999999999999999998 87 89999998875432100 0 0000000000 00000000
Q ss_pred -CCCCC---CCCCCCCCCCcchHHHHhhhhcccC----CCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhc
Q 018555 228 -GRGSE---LMPREADPCSPITAQRYHSLCAYMG----DDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVD 299 (354)
Q Consensus 228 -~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~ 299 (354)
..... +.........+.....+........ ..+++. ..........+.++++ |+|+|+|++|.++|..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~-P~lii~g~~D~~vp~~-- 237 (278)
T TIGR03056 162 AADQQRVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMA-QWDLAPLNRDLPRITI-PLHLIAGEEDKAVPPD-- 237 (278)
T ss_pred cccCcchhHHhhccccccccchhhHHHHhhcCchhhhHHHHHhh-cccccchhhhcccCCC-CEEEEEeCCCcccCHH--
Confidence 00000 0000000000000000100000000 000000 0001112346788999 9999999999999987
Q ss_pred HHHHHHHHHHHcCCCeEEEecCCCccc-CccHHHHHHHHHHHHH
Q 018555 300 KKALVERLCRAMGGAEKVEIEHGIHSL-SNRVKEAVQAIIDFVK 342 (354)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~i~~agH~~-~~~p~~~~~~i~~Fl~ 342 (354)
..+.+.+.++++++++++++||++ .++|+++++.|.+|++
T Consensus 238 ---~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 238 ---ESKRAATRVPTATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred ---HHHHHHHhccCCeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 677888888999999999999999 7899999999999984
No 18
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.94 E-value=1.5e-24 Score=208.75 Aligned_cols=229 Identities=15% Similarity=0.140 Sum_probs=141.4
Q ss_pred CcEEEEECCCCCCCCccccHHH-HHHHHh---hCCcEEEEEcccccCCCCCCCCccC----cHHHHHHHH-HHHHhhCCC
Q 018555 94 QQQVIFIGGLTDGFFATEYLEP-LAIALD---KERWSLVQFLMTSSYTGYGTSSLQQ----DAMEIDQLI-SYLINKDNS 164 (354)
Q Consensus 94 ~p~vIliHG~~~~~~~~~~~~~-la~~La---~~g~~Via~D~R~~~~G~G~S~~~~----~~~dl~~~i-~~l~~~~~~ 164 (354)
+++|||+||++ .+..+|.. +...|+ +.+|+|+++|+ +|||.|+.+. ..+++.+.+ ..+.+.++.
T Consensus 201 k~~VVLlHG~~---~s~~~W~~~~~~~L~~~~~~~yrVia~Dl----~G~G~S~~p~~~~ytl~~~a~~l~~~ll~~lg~ 273 (481)
T PLN03087 201 KEDVLFIHGFI---SSSAFWTETLFPNFSDAAKSTYRLFAVDL----LGFGRSPKPADSLYTLREHLEMIERSVLERYKV 273 (481)
T ss_pred CCeEEEECCCC---ccHHHHHHHHHHHHHHHhhCCCEEEEECC----CCCCCCcCCCCCcCCHHHHHHHHHHHHHHHcCC
Confidence 47999999999 77778874 445555 25999999999 7999997652 234444444 345556788
Q ss_pred CcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhhcchhHHHHHHH---------------HHHHHhcC
Q 018555 165 EGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRATLPETAAMIDL---------------ASSMIREG 228 (354)
Q Consensus 165 ~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~ 228 (354)
++++|+||||||.+++.++.+ |+ +|+++||++|........... .....+. ...+....
T Consensus 274 ~k~~LVGhSmGG~iAl~~A~~~Pe----~V~~LVLi~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~ 348 (481)
T PLN03087 274 KSFHIVAHSLGCILALALAVKHPG----AVKSLTLLAPPYYPVPKGVQA-TQYVMRKVAPRRVWPPIAFGASVACWYEHI 348 (481)
T ss_pred CCEEEEEECHHHHHHHHHHHhChH----hccEEEEECCCccccccchhH-HHHHHHHhcccccCCccccchhHHHHHHHH
Confidence 999999999999999999998 88 999999998744321110000 0000000 00000000
Q ss_pred CCCCCCCCCCCCCCcchHHHHhhhhcccCCCcc--------------------ccC-CC-ChHHHHHHhcCCCCCcEEEE
Q 018555 229 RGSELMPREADPCSPITAQRYHSLCAYMGDDDM--------------------FSS-DL-SDDQLKQRLGHMANTPCQVI 286 (354)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~-~l-~~~~~~~~l~~i~~~PvLvi 286 (354)
.. . ...... ..+.....+...........+ ... .. .++.+...+.+|++ |+|+|
T Consensus 349 ~~-~-~~~~~~-~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~l~~~I~v-PtLII 424 (481)
T PLN03087 349 SR-T-ICLVIC-KNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDHVRDQLKC-DVAIF 424 (481)
T ss_pred Hh-h-hhcccc-cchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHHHHHhCCC-CEEEE
Confidence 00 0 000000 000000000000000000000 000 00 01112233447999 99999
Q ss_pred eeCCCCCCCchhcHHHHHHHHHHHcCCCeEEEecCCCccc-C-ccHHHHHHHHHHHHHh
Q 018555 287 FSMADEYVPEYVDKKALVERLCRAMGGAEKVEIEHGIHSL-S-NRVKEAVQAIIDFVKR 343 (354)
Q Consensus 287 ~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~-~-~~p~~~~~~i~~Fl~~ 343 (354)
+|++|.++|+. ..+.+.+.+|++++++|+++||+. . ++|++|++.|.+|++.
T Consensus 425 ~Ge~D~ivP~~-----~~~~la~~iP~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 425 HGGDDELIPVE-----CSYAVKAKVPRARVKVIDDKDHITIVVGRQKEFARELEEIWRR 478 (481)
T ss_pred EECCCCCCCHH-----HHHHHHHhCCCCEEEEeCCCCCcchhhcCHHHHHHHHHHHhhc
Confidence 99999999988 778889999999999999999997 4 8999999999999864
No 19
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.94 E-value=7.6e-25 Score=195.45 Aligned_cols=228 Identities=18% Similarity=0.215 Sum_probs=143.6
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccC----cHHHHHHHHHHHHhhCCCCcE
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ----DAMEIDQLISYLINKDNSEGV 167 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~----~~~dl~~~i~~l~~~~~~~~~ 167 (354)
..+|+|||+||++ .+..+|..++..|.+ +|+|+++|+ +|||.|..+. ..++..+.+..+.+.++.+++
T Consensus 11 ~~~~~iv~lhG~~---~~~~~~~~~~~~l~~-~~~vi~~D~----~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 82 (257)
T TIGR03611 11 ADAPVVVLSSGLG---GSGSYWAPQLDVLTQ-RFHVVTYDH----RGTGRSPGELPPGYSIAHMADDVLQLLDALNIERF 82 (257)
T ss_pred CCCCEEEEEcCCC---cchhHHHHHHHHHHh-ccEEEEEcC----CCCCCCCCCCcccCCHHHHHHHHHHHHHHhCCCcE
Confidence 4578999999999 778889999999986 899999999 7999986432 234444444444444567899
Q ss_pred EEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhhcchhHHHHHHHHHHHHhcCCCCCCC--------CCCC
Q 018555 168 VLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLASSMIREGRGSELM--------PREA 238 (354)
Q Consensus 168 ~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~ 238 (354)
+|+||||||.+|+.++.+ |+ .|+++|++++.......... ..... ..++.......+. +...
T Consensus 83 ~l~G~S~Gg~~a~~~a~~~~~----~v~~~i~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (257)
T TIGR03611 83 HFVGHALGGLIGLQLALRYPE----RLLSLVLINAWSRPDPHTRR-CFDVR----IALLQHAGPEAYVHAQALFLYPADW 153 (257)
T ss_pred EEEEechhHHHHHHHHHHChH----HhHHheeecCCCCCChhHHH-HHHHH----HHHHhccCcchhhhhhhhhhccccH
Confidence 999999999999999988 77 89999999875443211000 00000 0000000000000 0000
Q ss_pred C-CCCcch-HHHHhhhhcccCCCcccc--CCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCC
Q 018555 239 D-PCSPIT-AQRYHSLCAYMGDDDMFS--SDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGGA 314 (354)
Q Consensus 239 ~-~~~~~~-~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~ 314 (354)
. ...... ...............++. ..+...+....+.++++ |+|+++|++|.++|.+ ..+++.+.++++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-P~l~i~g~~D~~~~~~-----~~~~~~~~~~~~ 227 (257)
T TIGR03611 154 ISENAARLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQH-PVLLIANRDDMLVPYT-----QSLRLAAALPNA 227 (257)
T ss_pred hhccchhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCc-cEEEEecCcCcccCHH-----HHHHHHHhcCCc
Confidence 0 000000 000000000000000000 00000112246778999 9999999999999987 667788888999
Q ss_pred eEEEecCCCccc-CccHHHHHHHHHHHHH
Q 018555 315 EKVEIEHGIHSL-SNRVKEAVQAIIDFVK 342 (354)
Q Consensus 315 ~~~~i~~agH~~-~~~p~~~~~~i~~Fl~ 342 (354)
+++.++++||++ .++|+++++.|.+||+
T Consensus 228 ~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 228 QLKLLPYGGHASNVTDPETFNRALLDFLK 256 (257)
T ss_pred eEEEECCCCCCccccCHHHHHHHHHHHhc
Confidence 999999999999 8899999999999996
No 20
>PLN02578 hydrolase
Probab=99.94 E-value=5e-25 Score=207.52 Aligned_cols=242 Identities=12% Similarity=0.133 Sum_probs=147.5
Q ss_pred CCeeEEEecCCCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCc---HHHHHHHHHHH
Q 018555 82 KPVQVAFKTGDYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQD---AMEIDQLISYL 158 (354)
Q Consensus 82 ~~~~~~~~~~~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~---~~dl~~~i~~l 158 (354)
+...++|...+.+++|||+||++ .+...|..++..|++ +|+|+++|+ +|||.|+.+.. ..+..+.+..+
T Consensus 74 ~~~~i~Y~~~g~g~~vvliHG~~---~~~~~w~~~~~~l~~-~~~v~~~D~----~G~G~S~~~~~~~~~~~~a~~l~~~ 145 (354)
T PLN02578 74 RGHKIHYVVQGEGLPIVLIHGFG---ASAFHWRYNIPELAK-KYKVYALDL----LGFGWSDKALIEYDAMVWRDQVADF 145 (354)
T ss_pred CCEEEEEEEcCCCCeEEEECCCC---CCHHHHHHHHHHHhc-CCEEEEECC----CCCCCCCCcccccCHHHHHHHHHHH
Confidence 34556676555678999999999 677889999999986 899999999 79999986532 22222222222
Q ss_pred HhhCCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhh------------cc-----hhHHHHHH-
Q 018555 159 INKDNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRA------------TL-----PETAAMID- 219 (354)
Q Consensus 159 ~~~~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~------------~~-----~~~~~~~~- 219 (354)
.+++..++++|+||||||.+++.+|.+ |+ +|+++|++++........ .. ........
T Consensus 146 i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~----~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (354)
T PLN02578 146 VKEVVKEPAVLVGNSLGGFTALSTAVGYPE----LVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQR 221 (354)
T ss_pred HHHhccCCeEEEEECHHHHHHHHHHHhChH----hcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHH
Confidence 223346899999999999999999999 88 999999998643211000 00 00000000
Q ss_pred HHHHHH-hcCCC-C---CCCCCCCCCC---CcchHHHHhhh-hcccCCCccc------cCCCChHHHHHHhcCCCCCcEE
Q 018555 220 LASSMI-REGRG-S---ELMPREADPC---SPITAQRYHSL-CAYMGDDDMF------SSDLSDDQLKQRLGHMANTPCQ 284 (354)
Q Consensus 220 ~~~~~~-~~~~~-~---~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~------~~~l~~~~~~~~l~~i~~~PvL 284 (354)
....+. ..... . ......+... .......+... ........++ ..........+.+.++++ |+|
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-PvL 300 (354)
T PLN02578 222 VVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSC-PLL 300 (354)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCC-CEE
Confidence 000000 00000 0 0000000000 00000000000 0000000000 000011123356789999 999
Q ss_pred EEeeCCCCCCCchhcHHHHHHHHHHHcCCCeEEEecCCCccc-CccHHHHHHHHHHHHH
Q 018555 285 VIFSMADEYVPEYVDKKALVERLCRAMGGAEKVEIEHGIHSL-SNRVKEAVQAIIDFVK 342 (354)
Q Consensus 285 vi~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~-~~~p~~~~~~i~~Fl~ 342 (354)
+|+|++|.++|.. ..+.+++.+|+++++++ ++||++ .++|++|++.|.+|++
T Consensus 301 iI~G~~D~~v~~~-----~~~~l~~~~p~a~l~~i-~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 301 LLWGDLDPWVGPA-----KAEKIKAFYPDTTLVNL-QAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred EEEeCCCCCCCHH-----HHHHHHHhCCCCEEEEe-CCCCCccccCHHHHHHHHHHHHh
Confidence 9999999999887 67788888999999989 699999 8999999999999986
No 21
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.94 E-value=1.6e-24 Score=202.21 Aligned_cols=233 Identities=14% Similarity=0.139 Sum_probs=143.0
Q ss_pred CCcEEEEECCCCCCCCcc-ccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccC--------cHHHHHHHHHHHHhh--
Q 018555 93 YQQQVIFIGGLTDGFFAT-EYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ--------DAMEIDQLISYLINK-- 161 (354)
Q Consensus 93 ~~p~vIliHG~~~~~~~~-~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~--------~~~dl~~~i~~l~~~-- 161 (354)
.+++|||+||++ .+. ..|..++..|+++||+|+++|+ +|||.|+... ..+|+.++++++...
T Consensus 58 ~~~~VvllHG~~---~~~~~~~~~~~~~L~~~Gy~V~~~D~----rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~ 130 (330)
T PLN02298 58 PRALIFMVHGYG---NDISWTFQSTAIFLAQMGFACFALDL----EGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREE 130 (330)
T ss_pred CceEEEEEcCCC---CCcceehhHHHHHHHhCCCEEEEecC----CCCCCCCCccccCCCHHHHHHHHHHHHHHHHhccc
Confidence 467899999998 333 3477788889888999999999 7999986321 256788888888653
Q ss_pred CCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhhcch-hHHHHHHHHHHHHhcCCCCCCCCCC--
Q 018555 162 DNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRATLP-ETAAMIDLASSMIREGRGSELMPRE-- 237 (354)
Q Consensus 162 ~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-- 237 (354)
+...+++|+||||||.+++.++.+ |+ +|+++|+++|........... ...........+... . ...+..
T Consensus 131 ~~~~~i~l~GhSmGG~ia~~~a~~~p~----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~ 203 (330)
T PLN02298 131 FQGLPRFLYGESMGGAICLLIHLANPE----GFDGAVLVAPMCKISDKIRPPWPIPQILTFVARFLPT-L--AIVPTADL 203 (330)
T ss_pred CCCCCEEEEEecchhHHHHHHHhcCcc----cceeEEEecccccCCcccCCchHHHHHHHHHHHHCCC-C--ccccCCCc
Confidence 233579999999999999999988 87 899999999865321100000 001111111111110 0 000000
Q ss_pred CCCCCcchHHHHhhhhcccCCCc--c---ccCCC-ChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHc
Q 018555 238 ADPCSPITAQRYHSLCAYMGDDD--M---FSSDL-SDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAM 311 (354)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~l-~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~ 311 (354)
....................... . +...+ ..+.....+.++++ |+|+|+|++|.++|.. ..+.+.+.+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-PvLii~G~~D~ivp~~-----~~~~l~~~i 277 (330)
T PLN02298 204 LEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSI-PFIVLHGSADVVTDPD-----VSRALYEEA 277 (330)
T ss_pred ccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCC-CEEEEecCCCCCCCHH-----HHHHHHHHh
Confidence 00000000011110000000000 0 00000 01123456789999 9999999999999988 566666555
Q ss_pred --CCCeEEEecCCCccc-CccHH----HHHHHHHHHHHhhC
Q 018555 312 --GGAEKVEIEHGIHSL-SNRVK----EAVQAIIDFVKREG 345 (354)
Q Consensus 312 --~~~~~~~i~~agH~~-~~~p~----~~~~~i~~Fl~~~~ 345 (354)
++++++++++++|.+ .++|+ ++.+.|.+||.+..
T Consensus 278 ~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~ 318 (330)
T PLN02298 278 KSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERC 318 (330)
T ss_pred ccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhc
Confidence 478999999999999 66664 57788899998753
No 22
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.94 E-value=1.9e-25 Score=200.39 Aligned_cols=228 Identities=13% Similarity=0.109 Sum_probs=141.6
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCc--HHHHHHHHHHHHhhCCCCcEEE
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQD--AMEIDQLISYLINKDNSEGVVL 169 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~--~~dl~~~i~~l~~~~~~~~~~L 169 (354)
..+|+|||+||++ ++...|..++..|++ +|+|+++|+ +|||.|..+.. .+++.+.+..+.+.++.++++|
T Consensus 14 ~~~~~iv~lhG~~---~~~~~~~~~~~~l~~-~~~vi~~D~----~G~G~s~~~~~~~~~~~~~d~~~~l~~l~~~~~~l 85 (255)
T PRK10673 14 HNNSPIVLVHGLF---GSLDNLGVLARDLVN-DHDIIQVDM----RNHGLSPRDPVMNYPAMAQDLLDTLDALQIEKATF 85 (255)
T ss_pred CCCCCEEEECCCC---CchhHHHHHHHHHhh-CCeEEEECC----CCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCceEE
Confidence 4678999999998 677789999999986 899999999 79998875432 3333333333333456788999
Q ss_pred EEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhhcchhHHHHHHHHHHHHhcCCCC-----CCCCCCCCCCCc
Q 018555 170 LGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLASSMIREGRGS-----ELMPREADPCSP 243 (354)
Q Consensus 170 vGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 243 (354)
+||||||.+++.++.+ |+ +|+++|++++.......... .........+...+... ..+... ...
T Consensus 86 vGhS~Gg~va~~~a~~~~~----~v~~lvli~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 155 (255)
T PRK10673 86 IGHSMGGKAVMALTALAPD----RIDKLVAIDIAPVDYHVRRH---DEIFAAINAVSEAGATTRQQAAAIMRQH---LNE 155 (255)
T ss_pred EEECHHHHHHHHHHHhCHh----hcceEEEEecCCCCccchhh---HHHHHHHHHhhhcccccHHHHHHHHHHh---cCC
Confidence 9999999999999988 88 99999998642211100000 00000001000000000 000000 000
Q ss_pred chHHHHhhhhcccCCCccccC----CCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCCeEEEe
Q 018555 244 ITAQRYHSLCAYMGDDDMFSS----DLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGGAEKVEI 319 (354)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~----~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~i 319 (354)
.....+...........+... ........+.+.++++ |+|+|+|++|.+++.. ..+.+.+.+++++++++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~l~i~G~~D~~~~~~-----~~~~~~~~~~~~~~~~~ 229 (255)
T PRK10673 156 EGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPH-PALFIRGGNSPYVTEA-----YRDDLLAQFPQARAHVI 229 (255)
T ss_pred HHHHHHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCC-CeEEEECCCCCCCCHH-----HHHHHHHhCCCcEEEEe
Confidence 000000000000000000000 0000000123567889 9999999999999877 77888888999999999
Q ss_pred cCCCccc-CccHHHHHHHHHHHHHh
Q 018555 320 EHGIHSL-SNRVKEAVQAIIDFVKR 343 (354)
Q Consensus 320 ~~agH~~-~~~p~~~~~~i~~Fl~~ 343 (354)
+++||++ .++|+++++.|.+||++
T Consensus 230 ~~~gH~~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 230 AGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred CCCCCeeeccCHHHHHHHHHHHHhc
Confidence 9999999 88999999999999974
No 23
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.93 E-value=4.2e-25 Score=195.67 Aligned_cols=227 Identities=19% Similarity=0.241 Sum_probs=145.7
Q ss_pred CCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccC---cHHHHHHHHHHHHhhCCCCcEEE
Q 018555 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ---DAMEIDQLISYLINKDNSEGVVL 169 (354)
Q Consensus 93 ~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~---~~~dl~~~i~~l~~~~~~~~~~L 169 (354)
.+|+|||+||++ .+...|..+++.|.+ ||+|+++|+ +|||.|+.+. ...++.+.+..+.+.++.++++|
T Consensus 12 ~~~~li~~hg~~---~~~~~~~~~~~~l~~-~~~v~~~d~----~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~v~l 83 (251)
T TIGR02427 12 GAPVLVFINSLG---TDLRMWDPVLPALTP-DFRVLRYDK----RGHGLSDAPEGPYSIEDLADDVLALLDHLGIERAVF 83 (251)
T ss_pred CCCeEEEEcCcc---cchhhHHHHHHHhhc-ccEEEEecC----CCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCceEE
Confidence 578999999999 777889999999985 999999999 7999986543 34454544555555556789999
Q ss_pred EEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhhcc-hhHHH-----HHHHHHHHHhcCCCCCCCCCCCCCCC
Q 018555 170 LGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRATL-PETAA-----MIDLASSMIREGRGSELMPREADPCS 242 (354)
Q Consensus 170 vGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (354)
+||||||.+++.+|.+ |+ +|+++|++++.......... ..... ........+.......+.. ..
T Consensus 84 iG~S~Gg~~a~~~a~~~p~----~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 154 (251)
T TIGR02427 84 CGLSLGGLIAQGLAARRPD----RVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFRE-----AH 154 (251)
T ss_pred EEeCchHHHHHHHHHHCHH----HhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHccccccc-----CC
Confidence 9999999999999988 78 99999998865321110000 00000 0000001111000000000 00
Q ss_pred cchHHHHhhhhcccCCCccc--cCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCCeEEEec
Q 018555 243 PITAQRYHSLCAYMGDDDMF--SSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGGAEKVEIE 320 (354)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~i~ 320 (354)
......+...........+. ...+........+.++++ |+++|+|++|.++|.+ ..+.+.+.+++.++++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Pvlii~g~~D~~~~~~-----~~~~~~~~~~~~~~~~~~ 228 (251)
T TIGR02427 155 PARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAV-PTLCIAGDQDGSTPPE-----LVREIADLVPGARFAEIR 228 (251)
T ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCC-CeEEEEeccCCcCChH-----HHHHHHHhCCCceEEEEC
Confidence 11111111111000000000 000111223356788999 9999999999999987 667788888999999999
Q ss_pred CCCccc-CccHHHHHHHHHHHHH
Q 018555 321 HGIHSL-SNRVKEAVQAIIDFVK 342 (354)
Q Consensus 321 ~agH~~-~~~p~~~~~~i~~Fl~ 342 (354)
++||+. .++|+++++.|.+|++
T Consensus 229 ~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 229 GAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred CCCCcccccChHHHHHHHHHHhC
Confidence 999999 7999999999999974
No 24
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.93 E-value=3.8e-24 Score=201.96 Aligned_cols=244 Identities=15% Similarity=0.201 Sum_probs=150.0
Q ss_pred CCCeeEEEecCC--CCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccC-------cHHHH
Q 018555 81 PKPVQVAFKTGD--YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ-------DAMEI 151 (354)
Q Consensus 81 ~~~~~~~~~~~~--~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~-------~~~dl 151 (354)
.+...+.|...+ .+++|||+||++ .+...|+.++..|++ +|+|+++|+ +|||.|+.+. ..+++
T Consensus 112 ~~~~~~~y~~~G~~~~~~ivllHG~~---~~~~~w~~~~~~L~~-~~~Via~Dl----pG~G~S~~p~~~~~~~ys~~~~ 183 (383)
T PLN03084 112 SDLFRWFCVESGSNNNPPVLLIHGFP---SQAYSYRKVLPVLSK-NYHAIAFDW----LGFGFSDKPQPGYGFNYTLDEY 183 (383)
T ss_pred CCceEEEEEecCCCCCCeEEEECCCC---CCHHHHHHHHHHHhc-CCEEEEECC----CCCCCCCCCcccccccCCHHHH
Confidence 455666666433 468999999999 777889999999986 899999999 8999987552 34555
Q ss_pred HHHHHHHHhhCCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhhcchhHHHHHHH-HHHHHhcCC
Q 018555 152 DQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRATLPETAAMIDL-ASSMIREGR 229 (354)
Q Consensus 152 ~~~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 229 (354)
.+.+..+.++++.++++|+|||+||.+++.++.+ |+ +|+++|+++|...............+... ...+.....
T Consensus 184 a~~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~----~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~~~~~~~~ 259 (383)
T PLN03084 184 VSSLESLIDELKSDKVSLVVQGYFSPPVVKYASAHPD----KIKKLILLNPPLTKEHAKLPSTLSEFSNFLLGEIFSQDP 259 (383)
T ss_pred HHHHHHHHHHhCCCCceEEEECHHHHHHHHHHHhChH----hhcEEEEECCCCccccccchHHHHHHHHHHhhhhhhcch
Confidence 5555555556678899999999999999999998 88 99999999986432110000000000000 000000000
Q ss_pred ---CCCCCCCCCCC-CCcchHHHHhhhhcccCCCc-----c---ccCCCC--hHHHHHHh--cCCCCCcEEEEeeCCCCC
Q 018555 230 ---GSELMPREADP-CSPITAQRYHSLCAYMGDDD-----M---FSSDLS--DDQLKQRL--GHMANTPCQVIFSMADEY 293 (354)
Q Consensus 230 ---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~---~~~~l~--~~~~~~~l--~~i~~~PvLvi~G~~D~~ 293 (354)
....+...... ........+.......+... + +...+. ...+...+ .++++ |+|+|+|++|.+
T Consensus 260 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~v-PvLiI~G~~D~~ 338 (383)
T PLN03084 260 LRASDKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKT-PITVCWGLRDRW 338 (383)
T ss_pred HHHHhhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCC-CEEEEeeCCCCC
Confidence 00000000000 00000000000000000000 0 000000 01121212 46788 999999999999
Q ss_pred CCchhcHHHHHHHHHHHcCCCeEEEecCCCccc-CccHHHHHHHHHHHHHh
Q 018555 294 VPEYVDKKALVERLCRAMGGAEKVEIEHGIHSL-SNRVKEAVQAIIDFVKR 343 (354)
Q Consensus 294 vp~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~-~~~p~~~~~~i~~Fl~~ 343 (354)
++.. ..+.+.+. +++++++|++|||++ .++|+++++.|.+||.+
T Consensus 339 v~~~-----~~~~~a~~-~~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 339 LNYD-----GVEDFCKS-SQHKLIELPMAGHHVQEDCGEELGGIISGILSK 383 (383)
T ss_pred cCHH-----HHHHHHHh-cCCeEEEECCCCCCcchhCHHHHHHHHHHHhhC
Confidence 9877 56667665 578999999999999 89999999999999863
No 25
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.93 E-value=1.8e-24 Score=192.55 Aligned_cols=223 Identities=13% Similarity=0.099 Sum_probs=133.7
Q ss_pred CcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccC--cHHHHHHHHHHHHhhCCCCcEEEEE
Q 018555 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ--DAMEIDQLISYLINKDNSEGVVLLG 171 (354)
Q Consensus 94 ~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~--~~~dl~~~i~~l~~~~~~~~~~LvG 171 (354)
+|+|||+||++ .+...|..+++.|+ +|+|+++|+ +|||.|+.+. ..+++.+.+..+.++++.++++|+|
T Consensus 2 ~p~vvllHG~~---~~~~~w~~~~~~l~--~~~vi~~D~----~G~G~S~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG 72 (242)
T PRK11126 2 LPWLVFLHGLL---GSGQDWQPVGEALP--DYPRLYIDL----PGHGGSAAISVDGFADVSRLLSQTLQSYNILPYWLVG 72 (242)
T ss_pred CCEEEEECCCC---CChHHHHHHHHHcC--CCCEEEecC----CCCCCCCCccccCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence 57899999999 78888999999984 799999999 7999987543 3334444444444456789999999
Q ss_pred EChhHHHHHHHHHh-cccccccccEEEEecccCchHhhh--c--chhHHHHHHH-----HHHHHhcCCCCCCCCCCCCCC
Q 018555 172 HSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRA--T--LPETAAMIDL-----ASSMIREGRGSELMPREADPC 241 (354)
Q Consensus 172 hS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~--~--~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 241 (354)
|||||.+|+.++.+ ++ .+|+++|++++........ . ......+... .......-....... ..
T Consensus 73 ~S~Gg~va~~~a~~~~~---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 145 (242)
T PRK11126 73 YSLGGRIAMYYACQGLA---GGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVFA----SL 145 (242)
T ss_pred ECHHHHHHHHHHHhCCc---ccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchhh----cc
Confidence 99999999999998 54 1499999987654211000 0 0000000000 000000000000000 00
Q ss_pred CcchHHHHhhhhccc---CCCccccC--CCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCCeE
Q 018555 242 SPITAQRYHSLCAYM---GDDDMFSS--DLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGGAEK 316 (354)
Q Consensus 242 ~~~~~~~~~~~~~~~---~~~~~~~~--~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~ 316 (354)
.......+....... ....++.. .....+....+.++++ |+++|+|++|..+. . .. +. +++++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-P~lii~G~~D~~~~-~-----~~----~~-~~~~~ 213 (242)
T PRK11126 146 NAEQRQQLVAKRSNNNGAAVAAMLEATSLAKQPDLRPALQALTF-PFYYLCGERDSKFQ-A-----LA----QQ-LALPL 213 (242)
T ss_pred CccHHHHHHHhcccCCHHHHHHHHHhcCcccCCcHHHHhhccCC-CeEEEEeCCcchHH-H-----HH----HH-hcCeE
Confidence 000000110000000 00000000 0111234467889999 99999999998442 1 22 22 37899
Q ss_pred EEecCCCccc-CccHHHHHHHHHHHHHhh
Q 018555 317 VEIEHGIHSL-SNRVKEAVQAIIDFVKRE 344 (354)
Q Consensus 317 ~~i~~agH~~-~~~p~~~~~~i~~Fl~~~ 344 (354)
++|+++||++ .++|+++++.|.+|++++
T Consensus 214 ~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 242 (242)
T PRK11126 214 HVIPNAGHNAHRENPAAFAASLAQILRLI 242 (242)
T ss_pred EEeCCCCCchhhhChHHHHHHHHHHHhhC
Confidence 9999999999 899999999999999753
No 26
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.93 E-value=5.2e-24 Score=189.98 Aligned_cols=246 Identities=15% Similarity=0.149 Sum_probs=154.6
Q ss_pred eeEEEecC--CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCc-----HHHHHHHHH
Q 018555 84 VQVAFKTG--DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQD-----AMEIDQLIS 156 (354)
Q Consensus 84 ~~~~~~~~--~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~-----~~dl~~~i~ 156 (354)
+.++|..+ +.+|.|+|+||+. ..+..|+.+...|+..||+|+|+|+ +|+|.|+.+.. +..+...+.
T Consensus 32 I~~h~~e~g~~~gP~illlHGfP---e~wyswr~q~~~la~~~~rviA~Dl----rGyG~Sd~P~~~~~Yt~~~l~~di~ 104 (322)
T KOG4178|consen 32 IRLHYVEGGPGDGPIVLLLHGFP---ESWYSWRHQIPGLASRGYRVIAPDL----RGYGFSDAPPHISEYTIDELVGDIV 104 (322)
T ss_pred EEEEEEeecCCCCCEEEEEccCC---ccchhhhhhhhhhhhcceEEEecCC----CCCCCCCCCCCcceeeHHHHHHHHH
Confidence 77777654 4789999999999 5666699999999999999999999 69999998765 233444444
Q ss_pred HHHhhCCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCch---Hhhh----cc---------hh---HHH
Q 018555 157 YLINKDNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDR---EYRA----TL---------PE---TAA 216 (354)
Q Consensus 157 ~l~~~~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~---~~~~----~~---------~~---~~~ 216 (354)
.+...++.++++|+||+||+++|..++.. |+ +|+++|+++..... +... .+ +. ...
T Consensus 105 ~lld~Lg~~k~~lvgHDwGaivaw~la~~~Pe----rv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~ 180 (322)
T KOG4178|consen 105 ALLDHLGLKKAFLVGHDWGAIVAWRLALFYPE----RVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKPET 180 (322)
T ss_pred HHHHHhccceeEEEeccchhHHHHHHHHhChh----hcceEEEecCCCCCcccchhhhhccccCccceeEeccccCcchh
Confidence 44445568999999999999999999998 99 99999998754330 0000 00 00 000
Q ss_pred HHH--HHHH----HHhcCCC-CCCCCCCCC--C--CCcchHHHHhhhhccc---CCCccccCCCCh-HHHHHHhcCCCCC
Q 018555 217 MID--LASS----MIREGRG-SELMPREAD--P--CSPITAQRYHSLCAYM---GDDDMFSSDLSD-DQLKQRLGHMANT 281 (354)
Q Consensus 217 ~~~--~~~~----~~~~~~~-~~~~~~~~~--~--~~~~~~~~~~~~~~~~---~~~~~~~~~l~~-~~~~~~l~~i~~~ 281 (354)
.+. ..+. +...+.. ....+.... + ......+.+....... +..+++...... +.+...+..+++
T Consensus 181 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~~~~~~~i~i- 259 (322)
T KOG4178|consen 181 ELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAPWALAKITI- 259 (322)
T ss_pred hhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchhcccccccccc-
Confidence 000 0000 0111100 011111000 0 0000111111111111 111111111111 012234567888
Q ss_pred cEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCC-eEEEecCCCccc-CccHHHHHHHHHHHHHhhC
Q 018555 282 PCQVIFSMADEYVPEYVDKKALVERLCRAMGGA-EKVEIEHGIHSL-SNRVKEAVQAIIDFVKREG 345 (354)
Q Consensus 282 PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~-~~~~i~~agH~~-~~~p~~~~~~i~~Fl~~~~ 345 (354)
|+++|+|++|.+.+.. ...+.+++.+|+. +.++++++||++ +++|+++++.|.+|+++..
T Consensus 260 Pv~fi~G~~D~v~~~p----~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~~ 321 (322)
T KOG4178|consen 260 PVLFIWGDLDPVLPYP----IFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINSFS 321 (322)
T ss_pred ceEEEEecCcccccch----hHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHhhc
Confidence 9999999999988755 2566777777876 678999999999 8999999999999998753
No 27
>PRK07581 hypothetical protein; Validated
Probab=99.93 E-value=2.5e-24 Score=201.76 Aligned_cols=242 Identities=18% Similarity=0.103 Sum_probs=147.6
Q ss_pred CeeEEEecC-----CCCcEEEEECCCCCCCCccccHHHHH---HHHhhCCcEEEEEcccccCCCCCCCCccCc-------
Q 018555 83 PVQVAFKTG-----DYQQQVIFIGGLTDGFFATEYLEPLA---IALDKERWSLVQFLMTSSYTGYGTSSLQQD------- 147 (354)
Q Consensus 83 ~~~~~~~~~-----~~~p~vIliHG~~~~~~~~~~~~~la---~~La~~g~~Via~D~R~~~~G~G~S~~~~~------- 147 (354)
.+.++|... +.+|+|||+||++ .+...|..++ ..|...+|+||++|+ +|||.|+.+..
T Consensus 25 ~~~l~y~~~G~~~~~~~~~vll~~~~~---~~~~~~~~~~~~~~~l~~~~~~vi~~D~----~G~G~S~~~~~~~~~~~~ 97 (339)
T PRK07581 25 DARLAYKTYGTLNAAKDNAILYPTWYS---GTHQDNEWLIGPGRALDPEKYFIIIPNM----FGNGLSSSPSNTPAPFNA 97 (339)
T ss_pred CceEEEEecCccCCCCCCEEEEeCCCC---CCcccchhhccCCCccCcCceEEEEecC----CCCCCCCCCCCCCCCCCC
Confidence 455555532 2346788888877 4555565443 366555899999999 79999875421
Q ss_pred --------HHHHHHHHHHHHhhCCCCc-EEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhh--hcch---
Q 018555 148 --------AMEIDQLISYLINKDNSEG-VVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYR--ATLP--- 212 (354)
Q Consensus 148 --------~~dl~~~i~~l~~~~~~~~-~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~--~~~~--- 212 (354)
.+|+.+....+.+.+++++ ++||||||||++|+.+|.+ |+ +|++||++++....... ....
T Consensus 98 ~~~~~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~----~V~~Lvli~~~~~~~~~~~~~~~~~~ 173 (339)
T PRK07581 98 ARFPHVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPD----MVERAAPIAGTAKTTPHNFVFLEGLK 173 (339)
T ss_pred CCCCceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHH----HHhhheeeecCCCCCHHHHHHHHHHH
Confidence 3555554455666678899 4899999999999999999 99 99999999754321100 0000
Q ss_pred --------------------hHHHHHHH------HHHHHhcCCCCCCCCCCCCCCCcchHHHHhhhh-cccCCCcc----
Q 018555 213 --------------------ETAAMIDL------ASSMIREGRGSELMPREADPCSPITAQRYHSLC-AYMGDDDM---- 261 (354)
Q Consensus 213 --------------------~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---- 261 (354)
........ ...+..... ...............+.... .......+
T Consensus 174 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 249 (339)
T PRK07581 174 AALTADPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQEL----WRAMGYASLEDFLVGFWEGNFLPRDPNNLLAML 249 (339)
T ss_pred HHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhh----ccccChhhHHHHHHHHHHHhhcccCcccHHHHH
Confidence 00000000 000000000 00000000000000000000 00000000
Q ss_pred ---ccCCC-C----hHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCCeEEEecC-CCccc-CccHH
Q 018555 262 ---FSSDL-S----DDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGGAEKVEIEH-GIHSL-SNRVK 331 (354)
Q Consensus 262 ---~~~~l-~----~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~i~~-agH~~-~~~p~ 331 (354)
....+ . ..++...+.+|++ |+|+|+|++|.++|+. ..+.+.+.+|+++++++++ +||.. .++++
T Consensus 250 ~~~~~~~~~~~~~~~~d~~~~L~~I~~-PtLvI~G~~D~~~p~~-----~~~~l~~~ip~a~l~~i~~~~GH~~~~~~~~ 323 (339)
T PRK07581 250 WTWQRGDISRNPAYGGDLAAALGSITA-KTFVMPISTDLYFPPE-----DCEAEAALIPNAELRPIESIWGHLAGFGQNP 323 (339)
T ss_pred HHhhhcccccCcccCCCHHHHHhcCCC-CEEEEEeCCCCCCCHH-----HHHHHHHhCCCCeEEEeCCCCCccccccCcH
Confidence 00000 0 1134577889999 9999999999999987 6778888899999999999 99999 89999
Q ss_pred HHHHHHHHHHHhhC
Q 018555 332 EAVQAIIDFVKREG 345 (354)
Q Consensus 332 ~~~~~i~~Fl~~~~ 345 (354)
++++.|.+||+++-
T Consensus 324 ~~~~~~~~~~~~~~ 337 (339)
T PRK07581 324 ADIAFIDAALKELL 337 (339)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999863
No 28
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.93 E-value=3.5e-25 Score=192.86 Aligned_cols=213 Identities=20% Similarity=0.218 Sum_probs=138.9
Q ss_pred EEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccC-----cHHHHHHHHHHHHhhCCCCcEEEEE
Q 018555 97 VIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ-----DAMEIDQLISYLINKDNSEGVVLLG 171 (354)
Q Consensus 97 vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~-----~~~dl~~~i~~l~~~~~~~~~~LvG 171 (354)
|||+||++ .+...|..+++.|+ +||+|+++|+ +|+|.|+.+. ..++..+.+..+.+.++.++++|+|
T Consensus 1 vv~~hG~~---~~~~~~~~~~~~l~-~~~~v~~~d~----~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG 72 (228)
T PF12697_consen 1 VVFLHGFG---GSSESWDPLAEALA-RGYRVIAFDL----PGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIKKVILVG 72 (228)
T ss_dssp EEEE-STT---TTGGGGHHHHHHHH-TTSEEEEEEC----TTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTSSEEEEE
T ss_pred eEEECCCC---CCHHHHHHHHHHHh-CCCEEEEEec----CCccccccccccCCcchhhhhhhhhhcccccccccccccc
Confidence 79999999 78889999999997 5999999999 7999997643 3444444444455556678999999
Q ss_pred EChhHHHHHHHHHh-cccccccccEEEEecccCchHhhh--c--chhHHHHHHHH----HHHHhcCCCCCCCCCCCCCCC
Q 018555 172 HSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRA--T--LPETAAMIDLA----SSMIREGRGSELMPREADPCS 242 (354)
Q Consensus 172 hS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~--~--~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 242 (354)
||+||.+++.++.+ |+ +|+++|+++|........ . ......+.... ..+..... .. . ..
T Consensus 73 ~S~Gg~~a~~~a~~~p~----~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~---~~ 140 (228)
T PF12697_consen 73 HSMGGMIALRLAARYPD----RVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFF----YR-W---FD 140 (228)
T ss_dssp ETHHHHHHHHHHHHSGG----GEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH----HH-H---HT
T ss_pred ccccccccccccccccc----ccccceeecccccccccccccccchhhhhhhhcccccccccccccc----cc-c---cc
Confidence 99999999999998 88 999999999988643211 0 00001111000 00000000 00 0 00
Q ss_pred cchHHHHhhhhcccCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCCeEEEecCC
Q 018555 243 PITAQRYHSLCAYMGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGGAEKVEIEHG 322 (354)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~i~~a 322 (354)
......+.... ......++............++++++ |+++|+|++|.+++.. ..+.+.+.++++++++++++
T Consensus 141 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-pvl~i~g~~D~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 213 (228)
T PF12697_consen 141 GDEPEDLIRSS-RRALAEYLRSNLWQADLSEALPRIKV-PVLVIHGEDDPIVPPE-----SAEELADKLPNAELVVIPGA 213 (228)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHGSSS-EEEEEEETTSSSSHHH-----HHHHHHHHSTTEEEEEETTS
T ss_pred ccccccccccc-ccccccccccccccccccccccccCC-CeEEeecCCCCCCCHH-----HHHHHHHHCCCCEEEEECCC
Confidence 00000000000 00000000000112334467889999 9999999999999866 77888888899999999999
Q ss_pred Cccc-CccHHHHHHH
Q 018555 323 IHSL-SNRVKEAVQA 336 (354)
Q Consensus 323 gH~~-~~~p~~~~~~ 336 (354)
||++ .++|++|+++
T Consensus 214 gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 214 GHFLFLEQPDEVAEA 228 (228)
T ss_dssp SSTHHHHSHHHHHHH
T ss_pred CCccHHHCHHHHhcC
Confidence 9999 8999999874
No 29
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.93 E-value=2.2e-23 Score=197.88 Aligned_cols=234 Identities=14% Similarity=0.148 Sum_probs=147.0
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccC--------cHHHHHHHHHHHHhhCC
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ--------DAMEIDQLISYLINKDN 163 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~--------~~~dl~~~i~~l~~~~~ 163 (354)
..+++|||+||++ .+...|..+++.|+++||+|+++|+ +|||.|+... ..+|+.++++++..+.+
T Consensus 134 ~~~~~Vl~lHG~~---~~~~~~~~~a~~L~~~Gy~V~~~D~----rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~~ 206 (395)
T PLN02652 134 EMRGILIIIHGLN---EHSGRYLHFAKQLTSCGFGVYAMDW----IGHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSENP 206 (395)
T ss_pred CCceEEEEECCch---HHHHHHHHHHHHHHHCCCEEEEeCC----CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCC
Confidence 4567999999999 5666789999999988999999999 7999887432 25678888888876555
Q ss_pred CCcEEEEEEChhHHHHHHHHHhcccccccccEEEEecccCchHhhhcchhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCc
Q 018555 164 SEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLASSMIREGRGSELMPREADPCSP 243 (354)
Q Consensus 164 ~~~~~LvGhS~GG~~a~~~a~~p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (354)
..+++|+||||||.+++.++..|+ ...+|+++|+.+|....... .+ ...........+.... ..+.......+
T Consensus 207 ~~~i~lvGhSmGG~ial~~a~~p~-~~~~v~glVL~sP~l~~~~~--~~-~~~~~~~l~~~~~p~~---~~~~~~~~~~~ 279 (395)
T PLN02652 207 GVPCFLFGHSTGGAVVLKAASYPS-IEDKLEGIVLTSPALRVKPA--HP-IVGAVAPIFSLVAPRF---QFKGANKRGIP 279 (395)
T ss_pred CCCEEEEEECHHHHHHHHHHhccC-cccccceEEEECcccccccc--hH-HHHHHHHHHHHhCCCC---cccCcccccCC
Confidence 568999999999999998876542 12379999999987532211 00 0001111111111000 00000000000
Q ss_pred c--hHHHHhhhh-cccCCCccccCC-----C-ChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcC--
Q 018555 244 I--TAQRYHSLC-AYMGDDDMFSSD-----L-SDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMG-- 312 (354)
Q Consensus 244 ~--~~~~~~~~~-~~~~~~~~~~~~-----l-~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~-- 312 (354)
. ......... ............ + ....+...+.++++ |+|+|+|++|.++|.+ ..+.+.+..+
T Consensus 280 ~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~v-PvLIi~G~~D~vvp~~-----~a~~l~~~~~~~ 353 (395)
T PLN02652 280 VSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTV-PFMVLHGTADRVTDPL-----ASQDLYNEAASR 353 (395)
T ss_pred cCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCC-CEEEEEeCCCCCCCHH-----HHHHHHHhcCCC
Confidence 0 000010000 000000000000 0 01123456789999 9999999999999987 5666666543
Q ss_pred CCeEEEecCCCccc-Cc-cHHHHHHHHHHHHHhhC
Q 018555 313 GAEKVEIEHGIHSL-SN-RVKEAVQAIIDFVKREG 345 (354)
Q Consensus 313 ~~~~~~i~~agH~~-~~-~p~~~~~~i~~Fl~~~~ 345 (354)
+.+++++++++|.+ .+ +++++.+.|.+||++..
T Consensus 354 ~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~ 388 (395)
T PLN02652 354 HKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRL 388 (395)
T ss_pred CceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHh
Confidence 47899999999999 54 78999999999998653
No 30
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.92 E-value=3e-24 Score=198.33 Aligned_cols=237 Identities=19% Similarity=0.199 Sum_probs=151.1
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhC-CcEEEEEcccccCCCCCCC-CccC----cHHHHHHHHHHHHhhCCCC
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKE-RWSLVQFLMTSSYTGYGTS-SLQQ----DAMEIDQLISYLINKDNSE 165 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~-g~~Via~D~R~~~~G~G~S-~~~~----~~~dl~~~i~~l~~~~~~~ 165 (354)
..+++|||+|||+ .+...|+.+...|.+. |++|+++|+ +|+|.+ ..+. ...+....+..+..++..+
T Consensus 56 ~~~~pvlllHGF~---~~~~~w~~~~~~L~~~~~~~v~aiDl----~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~~ 128 (326)
T KOG1454|consen 56 KDKPPVLLLHGFG---ASSFSWRRVVPLLSKAKGLRVLAIDL----PGHGYSSPLPRGPLYTLRELVELIRRFVKEVFVE 128 (326)
T ss_pred CCCCcEEEecccc---CCcccHhhhccccccccceEEEEEec----CCCCcCCCCCCCCceehhHHHHHHHHHHHhhcCc
Confidence 4689999999999 6777899999999874 499999999 899944 4433 3456666666666677788
Q ss_pred cEEEEEEChhHHHHHHHHHh-cccccccccEEE---EecccCchHhhhc--c-hhHHHHHHHHHHHHhcCCCC--CCCC-
Q 018555 166 GVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAI---FQAPVSDREYRAT--L-PETAAMIDLASSMIREGRGS--ELMP- 235 (354)
Q Consensus 166 ~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lI---l~~p~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~--~~~~- 235 (354)
+++||||||||.+|+.+|+. |+ .|+++| ++++......... . ..........+......... ....
T Consensus 129 ~~~lvghS~Gg~va~~~Aa~~P~----~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 204 (326)
T KOG1454|consen 129 PVSLVGHSLGGIVALKAAAYYPE----TVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSE 204 (326)
T ss_pred ceEEEEeCcHHHHHHHHHHhCcc----cccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchhheeH
Confidence 99999999999999999999 99 999999 5554433211110 0 00000000000000000000 0000
Q ss_pred -----CCCCC-CCcchHHHHhhhhccc--------CCCccccCCCC-hHHHHHHhcCCC-CCcEEEEeeCCCCCCCchhc
Q 018555 236 -----READP-CSPITAQRYHSLCAYM--------GDDDMFSSDLS-DDQLKQRLGHMA-NTPCQVIFSMADEYVPEYVD 299 (354)
Q Consensus 236 -----~~~~~-~~~~~~~~~~~~~~~~--------~~~~~~~~~l~-~~~~~~~l~~i~-~~PvLvi~G~~D~~vp~~~~ 299 (354)
..... ........+....... ....++..... ++.....++++. + |+|+|+|++|+++|.+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-pvlii~G~~D~~~p~~-- 281 (326)
T KOG1454|consen 205 GLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKC-PVLIIWGDKDQIVPLE-- 281 (326)
T ss_pred hhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCC-ceEEEEcCcCCccCHH--
Confidence 00000 0000111111111000 00111111111 133335677887 8 9999999999999988
Q ss_pred HHHHHHHHHHHcCCCeEEEecCCCccc-CccHHHHHHHHHHHHHhhC
Q 018555 300 KKALVERLCRAMGGAEKVEIEHGIHSL-SNRVKEAVQAIIDFVKREG 345 (354)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~i~~agH~~-~~~p~~~~~~i~~Fl~~~~ 345 (354)
..+.+++.+|++++++|++|||.+ .++|+++++.|..|+++..
T Consensus 282 ---~~~~~~~~~pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 282 ---LAEELKKKLPNAELVEIPGAGHLPHLERPEEVAALLRSFIARLR 325 (326)
T ss_pred ---HHHHHHhhCCCceEEEeCCCCcccccCCHHHHHHHHHHHHHHhc
Confidence 788888888999999999999999 7899999999999998754
No 31
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.92 E-value=3.1e-24 Score=194.90 Aligned_cols=231 Identities=14% Similarity=0.103 Sum_probs=139.4
Q ss_pred CCCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCcc----CcHHHHHHHHHHHHhhC-CCC
Q 018555 91 GDYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQ----QDAMEIDQLISYLINKD-NSE 165 (354)
Q Consensus 91 ~~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~----~~~~dl~~~i~~l~~~~-~~~ 165 (354)
++.+|+|||+||++ .+...|..++..|+++||+|+++|+ +|||.+... ...++..+.+..+.+.+ +.+
T Consensus 15 ~~~~p~vvliHG~~---~~~~~w~~~~~~L~~~g~~vi~~dl----~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l~~~~ 87 (273)
T PLN02211 15 NRQPPHFVLIHGIS---GGSWCWYKIRCLMENSGYKVTCIDL----KSAGIDQSDADSVTTFDEYNKPLIDFLSSLPENE 87 (273)
T ss_pred cCCCCeEEEECCCC---CCcCcHHHHHHHHHhCCCEEEEecc----cCCCCCCCCcccCCCHHHHHHHHHHHHHhcCCCC
Confidence 35678999999999 6778899999999878999999999 799976422 23333333333333333 357
Q ss_pred cEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhhcchhHHHHHHHHHHHHhc-CCCCCCCCCCC-----
Q 018555 166 GVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLASSMIRE-GRGSELMPREA----- 238 (354)
Q Consensus 166 ~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----- 238 (354)
+++||||||||.+++.++.+ |+ +|+++|++++......................+... ...........
T Consensus 88 ~v~lvGhS~GG~v~~~~a~~~p~----~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (273)
T PLN02211 88 KVILVGHSAGGLSVTQAIHRFPK----KICLAVYVAATMLKLGFQTDEDMKDGVPDLSEFGDVYELGFGLGPDQPPTSAI 163 (273)
T ss_pred CEEEEEECchHHHHHHHHHhChh----heeEEEEeccccCCCCCCHHHHHhccccchhhhccceeeeeccCCCCCCceee
Confidence 99999999999999999988 88 999999997643211100000000000000000000 00000000000
Q ss_pred ----------CCCCcchHHHHh-hhhcccCCCccccCCCChHHHHHHhcCC-CCCcEEEEeeCCCCCCCchhcHHHHHHH
Q 018555 239 ----------DPCSPITAQRYH-SLCAYMGDDDMFSSDLSDDQLKQRLGHM-ANTPCQVIFSMADEYVPEYVDKKALVER 306 (354)
Q Consensus 239 ----------~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~l~~i-~~~PvLvi~G~~D~~vp~~~~~~~~~~~ 306 (354)
....+.....+. ......... . +..........++ ++ |+++|+|++|.++|+. ..+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~v-P~l~I~g~~D~~ip~~-----~~~~ 232 (273)
T PLN02211 164 IKKEFRRKILYQMSPQEDSTLAAMLLRPGPIL-A----LRSARFEEETGDIDKV-PRVYIKTLHDHVVKPE-----QQEA 232 (273)
T ss_pred eCHHHHHHHHhcCCCHHHHHHHHHhcCCcCcc-c----cccccccccccccCcc-ceEEEEeCCCCCCCHH-----HHHH
Confidence 000000000000 000000000 0 1111111223345 67 9999999999999988 7778
Q ss_pred HHHHcCCCeEEEecCCCccc-CccHHHHHHHHHHHHHhh
Q 018555 307 LCRAMGGAEKVEIEHGIHSL-SNRVKEAVQAIIDFVKRE 344 (354)
Q Consensus 307 ~~~~~~~~~~~~i~~agH~~-~~~p~~~~~~i~~Fl~~~ 344 (354)
+.+.+++.+++.++ +||.+ +++|+++++.|.++....
T Consensus 233 m~~~~~~~~~~~l~-~gH~p~ls~P~~~~~~i~~~a~~~ 270 (273)
T PLN02211 233 MIKRWPPSQVYELE-SDHSPFFSTPFLLFGLLIKAAASV 270 (273)
T ss_pred HHHhCCccEEEEEC-CCCCccccCHHHHHHHHHHHHHHh
Confidence 88888888999996 89999 899999999999987654
No 32
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.92 E-value=1.5e-23 Score=189.98 Aligned_cols=233 Identities=15% Similarity=0.174 Sum_probs=142.5
Q ss_pred CCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccC------cHHHHHHHHHHHHhhCCCCc
Q 018555 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ------DAMEIDQLISYLINKDNSEG 166 (354)
Q Consensus 93 ~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~------~~~dl~~~i~~l~~~~~~~~ 166 (354)
.+++|||+||+++ ....+|..+...|.++||+|+++|+ +|+|.|..+. ..+++.+.+..+.+.++.++
T Consensus 24 ~~~~vl~~hG~~g--~~~~~~~~~~~~l~~~g~~vi~~d~----~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (288)
T TIGR01250 24 EKIKLLLLHGGPG--MSHEYLENLRELLKEEGREVIMYDQ----LGCGYSDQPDDSDELWTIDYFVDELEEVREKLGLDK 97 (288)
T ss_pred CCCeEEEEcCCCC--ccHHHHHHHHHHHHhcCCEEEEEcC----CCCCCCCCCCcccccccHHHHHHHHHHHHHHcCCCc
Confidence 4689999999752 3455678888888766999999999 7999987542 34555555556666677788
Q ss_pred EEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhhc-chh-H----HHHHHHHHHHHhcCCCCC-------
Q 018555 167 VVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRAT-LPE-T----AAMIDLASSMIREGRGSE------- 232 (354)
Q Consensus 167 ~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~~-~~~-~----~~~~~~~~~~~~~~~~~~------- 232 (354)
++|+||||||.+++.++.+ |+ +|+++|++++......... ... . .............+....
T Consensus 98 ~~liG~S~Gg~ia~~~a~~~p~----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (288)
T TIGR01250 98 FYLLGHSWGGMLAQEYALKYGQ----HLKGLIISSMLDSAPEYVKELNRLRKELPPEVRAAIKRCEASGDYDNPEYQEAV 173 (288)
T ss_pred EEEEEeehHHHHHHHHHHhCcc----ccceeeEecccccchHHHHHHHHHHhhcChhHHHHHHHHHhccCcchHHHHHHH
Confidence 9999999999999999998 88 9999999887643221100 000 0 000000000000000000
Q ss_pred --CC--CCCCCCCCcchHHHHhhhhc-----c-cCCCccc-cCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHH
Q 018555 233 --LM--PREADPCSPITAQRYHSLCA-----Y-MGDDDMF-SSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKK 301 (354)
Q Consensus 233 --~~--~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~-~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~ 301 (354)
+. ........+.....+..... . .+...+. ...+...+....+.++++ |+|+++|++|.+ ++.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-P~lii~G~~D~~-~~~---- 247 (288)
T TIGR01250 174 EVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKV-PTLLTVGEFDTM-TPE---- 247 (288)
T ss_pred HHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCC-CEEEEecCCCcc-CHH----
Confidence 00 00000000000000000000 0 0000000 001112234457788999 999999999985 444
Q ss_pred HHHHHHHHHcCCCeEEEecCCCccc-CccHHHHHHHHHHHHH
Q 018555 302 ALVERLCRAMGGAEKVEIEHGIHSL-SNRVKEAVQAIIDFVK 342 (354)
Q Consensus 302 ~~~~~~~~~~~~~~~~~i~~agH~~-~~~p~~~~~~i~~Fl~ 342 (354)
..+.+.+.+++.++++++++||++ .++|+++.+.|.+||+
T Consensus 248 -~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 248 -AAREMQELIAGSRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred -HHHHHHHhccCCeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 466777888999999999999999 8999999999999984
No 33
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.92 E-value=4.6e-24 Score=200.21 Aligned_cols=246 Identities=15% Similarity=0.166 Sum_probs=139.7
Q ss_pred CCeeEEEecCC-CCcEEEEE-CCCCCCCCccc-----------cHHHHHH---HHhhCCcEEEEEcccccCCCCCCCCcc
Q 018555 82 KPVQVAFKTGD-YQQQVIFI-GGLTDGFFATE-----------YLEPLAI---ALDKERWSLVQFLMTSSYTGYGTSSLQ 145 (354)
Q Consensus 82 ~~~~~~~~~~~-~~p~vIli-HG~~~~~~~~~-----------~~~~la~---~La~~g~~Via~D~R~~~~G~G~S~~~ 145 (354)
+...++|...+ .++++||+ ||++ .... +|..++. .|..++|+||++|+ +|||.|...
T Consensus 44 ~~~~l~y~~~G~~~~p~vll~g~~~---~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl----~G~g~s~~~ 116 (343)
T PRK08775 44 EDLRLRYELIGPAGAPVVFVAGGIS---AHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDF----IGADGSLDV 116 (343)
T ss_pred CCceEEEEEeccCCCCEEEEecCCC---cccccccccCCCCCCcchhccCCCCccCccccEEEEEeC----CCCCCCCCC
Confidence 45667776433 24345555 5554 2222 7888886 57434899999999 688876432
Q ss_pred -CcHHHHHHHHHHHHhhCCCCcE-EEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhh-cchhHHHH----
Q 018555 146 -QDAMEIDQLISYLINKDNSEGV-VLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRA-TLPETAAM---- 217 (354)
Q Consensus 146 -~~~~dl~~~i~~l~~~~~~~~~-~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~-~~~~~~~~---- 217 (354)
....+..+.+..+.+.++++++ +||||||||++|+.+|.+ |+ +|+++|++++........ ........
T Consensus 117 ~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~----~V~~LvLi~s~~~~~~~~~~~~~~~~~~~~~ 192 (343)
T PRK08775 117 PIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPA----RVRTLVVVSGAHRAHPYAAAWRALQRRAVAL 192 (343)
T ss_pred CCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChH----hhheEEEECccccCCHHHHHHHHHHHHHHHc
Confidence 2234444444455555667664 799999999999999999 98 999999998754321100 00000000
Q ss_pred ----------HHHHHHH--HhcCCCC----CCCCCCC--CCCCcchHHHHhh-----hhcccCCCccccCCCChHHH-HH
Q 018555 218 ----------IDLASSM--IREGRGS----ELMPREA--DPCSPITAQRYHS-----LCAYMGDDDMFSSDLSDDQL-KQ 273 (354)
Q Consensus 218 ----------~~~~~~~--~~~~~~~----~~~~~~~--~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~~~-~~ 273 (354)
....+.+ ....... .+..... ..........+.. .........++. ....... ..
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 271 (343)
T PRK08775 193 GQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLR-LSESIDLHRV 271 (343)
T ss_pred CCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHH-HHHHHhhcCC
Confidence 0000000 0000000 0000000 0000000010100 000000000000 0000000 12
Q ss_pred HhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHc-CCCeEEEecC-CCccc-CccHHHHHHHHHHHHHhhC
Q 018555 274 RLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAM-GGAEKVEIEH-GIHSL-SNRVKEAVQAIIDFVKREG 345 (354)
Q Consensus 274 ~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~-~~~~~~~i~~-agH~~-~~~p~~~~~~i~~Fl~~~~ 345 (354)
.+.+|++ |+|+|+|++|.++|.. ..+.+.+.+ |++++++|++ +||.+ .++|++|++.|.+||+++.
T Consensus 272 ~l~~I~~-PtLvi~G~~D~~~p~~-----~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~~~ 340 (343)
T PRK08775 272 DPEAIRV-PTVVVAVEGDRLVPLA-----DLVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDAILTTALRSTG 340 (343)
T ss_pred ChhcCCC-CeEEEEeCCCEeeCHH-----HHHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHHHHHHHHHhcc
Confidence 3678999 9999999999999977 566777766 7899999985 99999 8999999999999998764
No 34
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.92 E-value=2.3e-23 Score=198.91 Aligned_cols=237 Identities=15% Similarity=0.113 Sum_probs=140.9
Q ss_pred CCCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCc----HHH----HHHHHHHHHhhC
Q 018555 91 GDYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQD----AME----IDQLISYLINKD 162 (354)
Q Consensus 91 ~~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~----~~d----l~~~i~~l~~~~ 162 (354)
.+.+|+|||+||++ .+...|...+..|++ +|+|+++|+ +|||.|+.+.. .++ +.+.+..+.+.+
T Consensus 102 ~~~~p~vvllHG~~---~~~~~~~~~~~~L~~-~~~vi~~D~----rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l 173 (402)
T PLN02894 102 KEDAPTLVMVHGYG---ASQGFFFRNFDALAS-RFRVIAIDQ----LGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAK 173 (402)
T ss_pred CCCCCEEEEECCCC---cchhHHHHHHHHHHh-CCEEEEECC----CCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHc
Confidence 45679999999999 667778888889986 799999999 79999875531 111 222233333456
Q ss_pred CCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhhc--------chhHH-HH--------------H
Q 018555 163 NSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRAT--------LPETA-AM--------------I 218 (354)
Q Consensus 163 ~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~~--------~~~~~-~~--------------~ 218 (354)
+.++++|+||||||.+++.++.+ |+ +|+++|+++|......... ..... .+ +
T Consensus 174 ~~~~~~lvGhS~GG~la~~~a~~~p~----~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 249 (402)
T PLN02894 174 NLSNFILLGHSFGGYVAAKYALKHPE----HVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKII 249 (402)
T ss_pred CCCCeEEEEECHHHHHHHHHHHhCch----hhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHH
Confidence 77899999999999999999999 88 9999999987542211000 00000 00 0
Q ss_pred H--------HHHHHHhcCCCCCCCCCCCCCCCcchHHHHhhhh--cccCCC---cccc--CCCChHHHHHHhcCCCCCcE
Q 018555 219 D--------LASSMIREGRGSELMPREADPCSPITAQRYHSLC--AYMGDD---DMFS--SDLSDDQLKQRLGHMANTPC 283 (354)
Q Consensus 219 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~--~~l~~~~~~~~l~~i~~~Pv 283 (354)
. .............................+.... ...... .+.. ......+....+.+|++ |+
T Consensus 250 ~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~v-P~ 328 (402)
T PLN02894 250 RGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKV-PT 328 (402)
T ss_pred HhccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCC-CE
Confidence 0 0000000000000000000000000010111000 000000 0000 00112344467889999 99
Q ss_pred EEEeeCCCCCCCchhcHHHHHHHHHHHc-CCCeEEEecCCCccc-CccHHHHHHHHHHHHHhhCC
Q 018555 284 QVIFSMADEYVPEYVDKKALVERLCRAM-GGAEKVEIEHGIHSL-SNRVKEAVQAIIDFVKREGP 346 (354)
Q Consensus 284 Lvi~G~~D~~vp~~~~~~~~~~~~~~~~-~~~~~~~i~~agH~~-~~~p~~~~~~i~~Fl~~~~~ 346 (354)
++|+|++|.+++.. .+.+.+.. +++++++|+++||++ .++|++|++.|.+|++....
T Consensus 329 liI~G~~D~i~~~~------~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~~ 387 (402)
T PLN02894 329 TFIYGRHDWMNYEG------AVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYLS 387 (402)
T ss_pred EEEEeCCCCCCcHH------HHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhcc
Confidence 99999999876643 33344444 458899999999999 89999999999999987654
No 35
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.92 E-value=6.9e-24 Score=189.67 Aligned_cols=234 Identities=18% Similarity=0.152 Sum_probs=144.3
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcH-------HHHHHHHHHHHhhCCC
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDA-------MEIDQLISYLINKDNS 164 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~-------~dl~~~i~~l~~~~~~ 164 (354)
..+.++|||||+| .....|-...+.|++ .++|+++|+ +|+|+|+.+... ....+-|+..+.+.++
T Consensus 88 ~~~~plVliHGyG---Ag~g~f~~Nf~~La~-~~~vyaiDl----lG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L 159 (365)
T KOG4409|consen 88 ANKTPLVLIHGYG---AGLGLFFRNFDDLAK-IRNVYAIDL----LGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGL 159 (365)
T ss_pred cCCCcEEEEeccc---hhHHHHHHhhhhhhh-cCceEEecc----cCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCC
Confidence 5678999999999 555677778889997 999999999 999999977542 3344445555567889
Q ss_pred CcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhh-------hcchhHHHHHHHH-------HHHHhcCC
Q 018555 165 EGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYR-------ATLPETAAMIDLA-------SSMIREGR 229 (354)
Q Consensus 165 ~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~-------~~~~~~~~~~~~~-------~~~~~~~~ 229 (354)
++++||||||||+++..||.+ |+ +|+.|||++|..-.+.. ...+.+...+... ..+..-|.
T Consensus 160 ~KmilvGHSfGGYLaa~YAlKyPe----rV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~nPl~~LR~~Gp 235 (365)
T KOG4409|consen 160 EKMILVGHSFGGYLAAKYALKYPE----RVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNFNPLALLRLMGP 235 (365)
T ss_pred cceeEeeccchHHHHHHHHHhChH----hhceEEEecccccccCCCcchhhcCCChHHHhhhhhhhhcCCHHHHHHhccc
Confidence 999999999999999999999 99 99999999997654422 1111111000000 00000000
Q ss_pred -CCC----CCCCCCCC---CCcch-HHHHhhhhc--ccCCCcc----ccCC-CChHHHHHHhcCCC--CCcEEEEeeCCC
Q 018555 230 -GSE----LMPREADP---CSPIT-AQRYHSLCA--YMGDDDM----FSSD-LSDDQLKQRLGHMA--NTPCQVIFSMAD 291 (354)
Q Consensus 230 -~~~----~~~~~~~~---~~~~~-~~~~~~~~~--~~~~~~~----~~~~-l~~~~~~~~l~~i~--~~PvLvi~G~~D 291 (354)
+.. +.+..+.. ..... ..++...+. .+.-... +... .....+.+++..++ + |+++|+|++|
T Consensus 236 ~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l~~~~-pv~fiyG~~d 314 (365)
T KOG4409|consen 236 LGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLRELKKDV-PVTFIYGDRD 314 (365)
T ss_pred cchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHhhccCC-CEEEEecCcc
Confidence 000 00000000 00000 111111111 1100000 1111 12334446666676 8 9999999999
Q ss_pred CCCCchhcHHHHHHHHHH--HcCCCeEEEecCCCccc-CccHHHHHHHHHHHHHhh
Q 018555 292 EYVPEYVDKKALVERLCR--AMGGAEKVEIEHGIHSL-SNRVKEAVQAIIDFVKRE 344 (354)
Q Consensus 292 ~~vp~~~~~~~~~~~~~~--~~~~~~~~~i~~agH~~-~~~p~~~~~~i~~Fl~~~ 344 (354)
-+--.. ..++.+ ....++.++|++|||.+ .++|+.|++.|..+++..
T Consensus 315 WmD~~~------g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 315 WMDKNA------GLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDKV 364 (365)
T ss_pred cccchh------HHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhcc
Confidence 753222 222232 23448899999999999 899999999999998754
No 36
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.92 E-value=1.2e-23 Score=185.98 Aligned_cols=229 Identities=16% Similarity=0.180 Sum_probs=140.1
Q ss_pred CcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccC-----cHHHHHHH-HHHHHhhCCCCcE
Q 018555 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ-----DAMEIDQL-ISYLINKDNSEGV 167 (354)
Q Consensus 94 ~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~-----~~~dl~~~-i~~l~~~~~~~~~ 167 (354)
+|+|||+||++ .+...|..+++.|+ +||+|+++|+ +|+|.|+.+. ..+++.+. +..+.+.++.+++
T Consensus 1 ~~~vv~~hG~~---~~~~~~~~~~~~L~-~~~~v~~~d~----~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (251)
T TIGR03695 1 KPVLVFLHGFL---GSGADWQALIELLG-PHFRCLAIDL----PGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIEPF 72 (251)
T ss_pred CCEEEEEcCCC---CchhhHHHHHHHhc-ccCeEEEEcC----CCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCCeE
Confidence 47899999999 77888999999999 5999999999 7999987543 23333333 5555556677899
Q ss_pred EEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhh-cchhHHHHHHHHHHHHhcC--------CCCCCCCCC
Q 018555 168 VLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRA-TLPETAAMIDLASSMIREG--------RGSELMPRE 237 (354)
Q Consensus 168 ~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~ 237 (354)
+|+||||||.+++.++.+ |+ .|+++|++++........ ..............+.... .........
T Consensus 73 ~l~G~S~Gg~ia~~~a~~~~~----~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (251)
T TIGR03695 73 FLVGYSMGGRIALYYALQYPE----RVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQ 148 (251)
T ss_pred EEEEeccHHHHHHHHHHhCch----heeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeeec
Confidence 999999999999999998 88 899999998754321100 0000000000000000000 000000000
Q ss_pred CCCCCcchHHHHhhhhcccCCCc---ccc--CCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcC
Q 018555 238 ADPCSPITAQRYHSLCAYMGDDD---MFS--SDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMG 312 (354)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~ 312 (354)
. .........+........... .+. ...........+.++++ |+|+|+|++|..++ . ..+.+.+..+
T Consensus 149 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~l~i~g~~D~~~~-~-----~~~~~~~~~~ 220 (251)
T TIGR03695 149 K-NLPPEQRQALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTI-PVLYLCGEKDEKFV-Q-----IAKEMQKLLP 220 (251)
T ss_pred c-cCChHHhHHHHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCC-ceEEEeeCcchHHH-H-----HHHHHHhcCC
Confidence 0 000000000000000000000 000 00011122345778999 99999999998653 3 4567778889
Q ss_pred CCeEEEecCCCccc-CccHHHHHHHHHHHHH
Q 018555 313 GAEKVEIEHGIHSL-SNRVKEAVQAIIDFVK 342 (354)
Q Consensus 313 ~~~~~~i~~agH~~-~~~p~~~~~~i~~Fl~ 342 (354)
+.++++++++||++ .++|+++++.|.+||+
T Consensus 221 ~~~~~~~~~~gH~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 221 NLTLVIIANAGHNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred CCcEEEEcCCCCCcCccChHHHHHHHHHHhC
Confidence 99999999999999 7899999999999983
No 37
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.91 E-value=6.3e-23 Score=194.88 Aligned_cols=235 Identities=15% Similarity=0.111 Sum_probs=141.4
Q ss_pred CcEEEEECCCCCCCCccc-------------cHHHHHH---HH-hhCCcEEEEEcccccCCC-CCCCCc-----------
Q 018555 94 QQQVIFIGGLTDGFFATE-------------YLEPLAI---AL-DKERWSLVQFLMTSSYTG-YGTSSL----------- 144 (354)
Q Consensus 94 ~p~vIliHG~~~~~~~~~-------------~~~~la~---~L-a~~g~~Via~D~R~~~~G-~G~S~~----------- 144 (354)
+|+|||+||++ .+.. +|..++. .| . .+|+||++|++ | +|.|+.
T Consensus 48 ~p~vvl~HG~~---~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~-~~~~vi~~Dl~----G~~~~s~~~~~~~~~~~~~ 119 (379)
T PRK00175 48 SNAVLICHALT---GDHHVAGPHSPDDPKPGWWDNMVGPGKPIDT-DRYFVICSNVL----GGCKGSTGPSSINPDTGKP 119 (379)
T ss_pred CCEEEEeCCcC---CchhhcccccccCCCCcchhhccCCCCccCc-cceEEEeccCC----CCCCCCCCCCCCCCCCCCc
Confidence 68999999999 4444 5787762 34 5 49999999994 4 333321
Q ss_pred ------cCcHHHHHHHHHHHHhhCCCCc-EEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhh--cchhH
Q 018555 145 ------QQDAMEIDQLISYLINKDNSEG-VVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRA--TLPET 214 (354)
Q Consensus 145 ------~~~~~dl~~~i~~l~~~~~~~~-~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~--~~~~~ 214 (354)
....+++.+.+..+.+.++.++ ++|+||||||.+++.+|.+ |+ +|+++|++++........ .....
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~----~v~~lvl~~~~~~~~~~~~~~~~~~ 195 (379)
T PRK00175 120 YGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPD----RVRSALVIASSARLSAQNIAFNEVA 195 (379)
T ss_pred ccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChH----hhhEEEEECCCcccCHHHHHHHHHH
Confidence 1235666666666666778888 5999999999999999999 88 999999998654321100 00000
Q ss_pred HHHH----------------------HHHHH----------HHhcCCCCCCCCCCC-C-CCCcchHHHHhh-----hhcc
Q 018555 215 AAMI----------------------DLASS----------MIREGRGSELMPREA-D-PCSPITAQRYHS-----LCAY 255 (354)
Q Consensus 215 ~~~~----------------------~~~~~----------~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~-----~~~~ 255 (354)
...+ ...+. .+............. . .........+.. ....
T Consensus 196 ~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 275 (379)
T PRK00175 196 RQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQGDKFVER 275 (379)
T ss_pred HHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHHHHHHhhc
Confidence 0000 00000 000000000000000 0 000000111110 0000
Q ss_pred cCCCccc-------cCCC---ChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCC----eEEEec-
Q 018555 256 MGDDDMF-------SSDL---SDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGGA----EKVEIE- 320 (354)
Q Consensus 256 ~~~~~~~-------~~~l---~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~----~~~~i~- 320 (354)
.....+. ..+. ...++.+.+.+|++ |+|+|+|++|.++|+. ..+.+.+.++++ ++++++
T Consensus 276 ~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~-PtLvI~G~~D~~~p~~-----~~~~la~~i~~a~~~~~l~~i~~ 349 (379)
T PRK00175 276 FDANSYLYLTRALDYFDPARGRGGDLAAALARIKA-RFLVVSFTSDWLFPPA-----RSREIVDALLAAGADVSYAEIDS 349 (379)
T ss_pred cCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCC-CEEEEEECCccccCHH-----HHHHHHHHHHhcCCCeEEEEeCC
Confidence 0000000 0000 00225678899999 9999999999999988 677778888876 677775
Q ss_pred CCCccc-CccHHHHHHHHHHHHHhhCC
Q 018555 321 HGIHSL-SNRVKEAVQAIIDFVKREGP 346 (354)
Q Consensus 321 ~agH~~-~~~p~~~~~~i~~Fl~~~~~ 346 (354)
++||.+ +++|++|++.|.+||+++..
T Consensus 350 ~~GH~~~le~p~~~~~~L~~FL~~~~~ 376 (379)
T PRK00175 350 PYGHDAFLLDDPRYGRLVRAFLERAAR 376 (379)
T ss_pred CCCchhHhcCHHHHHHHHHHHHHhhhh
Confidence 999999 89999999999999998764
No 38
>PLN02511 hydrolase
Probab=99.90 E-value=1.5e-22 Score=192.61 Aligned_cols=237 Identities=15% Similarity=0.184 Sum_probs=145.9
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCcc-------CcHHHHHHHHHHHHhhCCC
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQ-------QDAMEIDQLISYLINKDNS 164 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~-------~~~~dl~~~i~~l~~~~~~ 164 (354)
..+|+|||+||++++. ...|+..++..+.++||+|+++|+ +|||.|... ...+|+.++++++..+++.
T Consensus 98 ~~~p~vvllHG~~g~s-~~~y~~~~~~~~~~~g~~vv~~d~----rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~ 172 (388)
T PLN02511 98 ADAPVLILLPGLTGGS-DDSYVRHMLLRARSKGWRVVVFNS----RGCADSPVTTPQFYSASFTGDLRQVVDHVAGRYPS 172 (388)
T ss_pred CCCCEEEEECCCCCCC-CCHHHHHHHHHHHHCCCEEEEEec----CCCCCCCCCCcCEEcCCchHHHHHHHHHHHHHCCC
Confidence 4578999999997432 223566777777667999999999 699988632 4478999999999987776
Q ss_pred CcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHh-h---hc-chh-H-HHHHHHHHHHHhcCC--CCCCC
Q 018555 165 EGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREY-R---AT-LPE-T-AAMIDLASSMIREGR--GSELM 234 (354)
Q Consensus 165 ~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~-~---~~-~~~-~-~~~~~~~~~~~~~~~--~~~~~ 234 (354)
.+++++||||||.+++.|+.+ ++ ...|.++|++++..+... . .. ... . ..+....+++..... ... +
T Consensus 173 ~~~~lvG~SlGg~i~~~yl~~~~~--~~~v~~~v~is~p~~l~~~~~~~~~~~~~~y~~~~~~~l~~~~~~~~~~~~~-~ 249 (388)
T PLN02511 173 ANLYAAGWSLGANILVNYLGEEGE--NCPLSGAVSLCNPFDLVIADEDFHKGFNNVYDKALAKALRKIFAKHALLFEG-L 249 (388)
T ss_pred CCEEEEEechhHHHHHHHHHhcCC--CCCceEEEEECCCcCHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhh-C
Confidence 799999999999999999988 65 113788887765543211 0 00 000 0 001111111111000 000 0
Q ss_pred CCCCCC---CCcchHHHHhhhhccc--C---CCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHH
Q 018555 235 PREADP---CSPITAQRYHSLCAYM--G---DDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVER 306 (354)
Q Consensus 235 ~~~~~~---~~~~~~~~~~~~~~~~--~---~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~ 306 (354)
+..... ......+.+....... + ..++|. .......+.+|++ |+|+|+|++|+++|.... ...
T Consensus 250 ~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~----~~s~~~~L~~I~v-PtLiI~g~dDpi~p~~~~----~~~ 320 (388)
T PLN02511 250 GGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYS----NSSSSDSIKHVRV-PLLCIQAANDPIAPARGI----PRE 320 (388)
T ss_pred CCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHH----HcCchhhhccCCC-CeEEEEcCCCCcCCcccC----cHh
Confidence 000000 0001122222211110 0 001110 0112357889999 999999999999987621 133
Q ss_pred HHHHcCCCeEEEecCCCccc-CccHHH------HHHHHHHHHHhhC
Q 018555 307 LCRAMGGAEKVEIEHGIHSL-SNRVKE------AVQAIIDFVKREG 345 (354)
Q Consensus 307 ~~~~~~~~~~~~i~~agH~~-~~~p~~------~~~~i~~Fl~~~~ 345 (354)
..+..|++++++++++||.. .++|+. +.+.|.+||+.+.
T Consensus 321 ~~~~~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~ 366 (388)
T PLN02511 321 DIKANPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALE 366 (388)
T ss_pred HHhcCCCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHH
Confidence 45667999999999999999 777754 6899999998754
No 39
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.90 E-value=1.6e-22 Score=190.43 Aligned_cols=236 Identities=17% Similarity=0.183 Sum_probs=141.0
Q ss_pred CCcEEEEECCCCCCCCccc--------cHHHHH---HHHhhCCcEEEEEcccccCCC--CCCCCc---------------
Q 018555 93 YQQQVIFIGGLTDGFFATE--------YLEPLA---IALDKERWSLVQFLMTSSYTG--YGTSSL--------------- 144 (354)
Q Consensus 93 ~~p~vIliHG~~~~~~~~~--------~~~~la---~~La~~g~~Via~D~R~~~~G--~G~S~~--------------- 144 (354)
.+++|||+||++.+..... +|..++ ..|..++|+|+++|+ +| +|.+..
T Consensus 30 ~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~----~G~~~g~s~~~~~~~~~~~~~~~~~ 105 (351)
T TIGR01392 30 RSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNV----LGGCYGSTGPSSINPGGRPYGSDFP 105 (351)
T ss_pred CCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecC----CCCCCCCCCCCCCCCCCCcCCCCCC
Confidence 3679999999993211111 588775 245446999999999 56 555432
Q ss_pred cCcHHHHHHHHHHHHhhCCCCc-EEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhh--cchhHHHH---
Q 018555 145 QQDAMEIDQLISYLINKDNSEG-VVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRA--TLPETAAM--- 217 (354)
Q Consensus 145 ~~~~~dl~~~i~~l~~~~~~~~-~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~--~~~~~~~~--- 217 (354)
+...+++.+.+..+.++++.++ ++|+||||||++++.++.+ |+ +|+++|++++........ ........
T Consensus 106 ~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 181 (351)
T TIGR01392 106 LITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPE----RVRAIVVLATSARHSAWCIAFNEVQRQAILA 181 (351)
T ss_pred CCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChH----hhheEEEEccCCcCCHHHHHHHHHHHHHHHh
Confidence 1235676666666667778888 9999999999999999998 88 999999998765321110 00000000
Q ss_pred ------------------HHHHHHHHh--cCCCC----CCCCCCCCCCCc-------chHHHHhh-----hhcccCCCcc
Q 018555 218 ------------------IDLASSMIR--EGRGS----ELMPREADPCSP-------ITAQRYHS-----LCAYMGDDDM 261 (354)
Q Consensus 218 ------------------~~~~~~~~~--~~~~~----~~~~~~~~~~~~-------~~~~~~~~-----~~~~~~~~~~ 261 (354)
....+.+.. ..... .+.........+ .....+.. .........+
T Consensus 182 ~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 261 (351)
T TIGR01392 182 DPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQGDKFVDRFDANSY 261 (351)
T ss_pred CCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHHHHHHHhhcCcchH
Confidence 000000000 00000 000000000000 00001110 0000000000
Q ss_pred ------c-cCCCC--hHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCCeEE-----EecCCCccc-
Q 018555 262 ------F-SSDLS--DDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGGAEKV-----EIEHGIHSL- 326 (354)
Q Consensus 262 ------~-~~~l~--~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~-----~i~~agH~~- 326 (354)
+ ..++. ..++.+.+.+|++ |+|+|+|++|.++|+. ..+.+.+.+|+++++ +++++||.+
T Consensus 262 ~~~~~~l~~~d~~~~~~~~~~~l~~I~~-P~Lvi~G~~D~~~p~~-----~~~~~a~~i~~~~~~v~~~~i~~~~GH~~~ 335 (351)
T TIGR01392 262 LYLTRALDTHDLGRGRGSLTEALSRIKA-PFLVVSITSDWLFPPA-----ESRELAKALPAAGLRVTYVEIESPYGHDAF 335 (351)
T ss_pred HHHHHHHHhcCCcCCCCCHHHHHhhCCC-CEEEEEeCCccccCHH-----HHHHHHHHHhhcCCceEEEEeCCCCCcchh
Confidence 0 00010 1234578899999 9999999999999988 777888888888765 567999999
Q ss_pred CccHHHHHHHHHHHHH
Q 018555 327 SNRVKEAVQAIIDFVK 342 (354)
Q Consensus 327 ~~~p~~~~~~i~~Fl~ 342 (354)
.++|++|++.|.+||+
T Consensus 336 le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 336 LVETDQVEELIRGFLR 351 (351)
T ss_pred hcCHHHHHHHHHHHhC
Confidence 8999999999999984
No 40
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.90 E-value=1.2e-21 Score=185.48 Aligned_cols=224 Identities=15% Similarity=0.161 Sum_probs=143.6
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCcc---CcHHHHHHHHHHHHhhCCCCcEE
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQ---QDAMEIDQLISYLINKDNSEGVV 168 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~---~~~~dl~~~i~~l~~~~~~~~~~ 168 (354)
+.+++|||+||++ ++...|..++..|.+ +|+|+++|+ +|||.+... ....++.+.+..+.+.++..+++
T Consensus 129 ~~~~~vl~~HG~~---~~~~~~~~~~~~l~~-~~~v~~~d~----~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (371)
T PRK14875 129 GDGTPVVLIHGFG---GDLNNWLFNHAALAA-GRPVIALDL----PGHGASSKAVGAGSLDELAAAVLAFLDALGIERAH 200 (371)
T ss_pred CCCCeEEEECCCC---CccchHHHHHHHHhc-CCEEEEEcC----CCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCccEE
Confidence 3478999999999 778889999999986 799999999 799988532 34566666666666677788999
Q ss_pred EEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhh-----hcc---hhHHHHHHHHHHHHhcCCCCCCCCCCC-
Q 018555 169 LLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYR-----ATL---PETAAMIDLASSMIREGRGSELMPREA- 238 (354)
Q Consensus 169 LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~-----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~- 238 (354)
|+||||||.+++.+|.+ |+ ++.++|+++|....... ..+ .....+........... ..+.....
T Consensus 201 lvG~S~Gg~~a~~~a~~~~~----~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 274 (371)
T PRK14875 201 LVGHSMGGAVALRLAARAPQ----RVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPVLELLFADP--ALVTRQMVE 274 (371)
T ss_pred EEeechHHHHHHHHHHhCch----heeEEEEECcCCcCcccchhHHHHhhcccchhHHHHHHHHHhcCh--hhCCHHHHH
Confidence 99999999999999988 77 89999999875322100 000 00000111111111000 00000000
Q ss_pred ---C-CCCcchHHHHhhhhcccCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCC
Q 018555 239 ---D-PCSPITAQRYHSLCAYMGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGGA 314 (354)
Q Consensus 239 ---~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~ 314 (354)
. .........+..... ..+............+.++++ |+|+|+|++|.++|.. ..+.+ .++.
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~i~~-Pvlii~g~~D~~vp~~-----~~~~l---~~~~ 340 (371)
T PRK14875 275 DLLKYKRLDGVDDALRALAD-----ALFAGGRQRVDLRDRLASLAI-PVLVIWGEQDRIIPAA-----HAQGL---PDGV 340 (371)
T ss_pred HHHHHhccccHHHHHHHHHH-----HhccCcccchhHHHHHhcCCC-CEEEEEECCCCccCHH-----HHhhc---cCCC
Confidence 0 000000000000000 001111122334467788999 9999999999999876 33332 3568
Q ss_pred eEEEecCCCccc-CccHHHHHHHHHHHHHh
Q 018555 315 EKVEIEHGIHSL-SNRVKEAVQAIIDFVKR 343 (354)
Q Consensus 315 ~~~~i~~agH~~-~~~p~~~~~~i~~Fl~~ 343 (354)
++++++++||++ .++|+++.+.|.+||++
T Consensus 341 ~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 341 AVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred eEEEeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 899999999999 89999999999999974
No 41
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.89 E-value=8e-22 Score=180.42 Aligned_cols=233 Identities=18% Similarity=0.202 Sum_probs=140.4
Q ss_pred CcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCC---------ccCcHHHHHHHHHHHHhhCCC
Q 018555 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSS---------LQQDAMEIDQLISYLINKDNS 164 (354)
Q Consensus 94 ~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~---------~~~~~~dl~~~i~~l~~~~~~ 164 (354)
..+||++||++ -...-|..++..|..+||.|+++|+ +|||.|. +.+...|+.++++.+......
T Consensus 34 ~g~Vvl~HG~~---Eh~~ry~~la~~l~~~G~~V~~~D~----RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~~~~ 106 (298)
T COG2267 34 KGVVVLVHGLG---EHSGRYEELADDLAARGFDVYALDL----RGHGRSPRGQRGHVDSFADYVDDLDAFVETIAEPDPG 106 (298)
T ss_pred CcEEEEecCch---HHHHHHHHHHHHHHhCCCEEEEecC----CCCCCCCCCCcCCchhHHHHHHHHHHHHHHHhccCCC
Confidence 37999999999 4555678899999999999999999 6999996 122345666666666654556
Q ss_pred CcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhhcchhHHHHHHHHHHHHhcCCCCCCCCC-----CC
Q 018555 165 EGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLASSMIREGRGSELMPR-----EA 238 (354)
Q Consensus 165 ~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 238 (354)
.+++|+||||||.+++.|+.+ +. .|+++||.+|.......... .............-.. .+... ..
T Consensus 107 ~p~~l~gHSmGg~Ia~~~~~~~~~----~i~~~vLssP~~~l~~~~~~---~~~~~~~~~~~~~~~p-~~~~~~~~~~~~ 178 (298)
T COG2267 107 LPVFLLGHSMGGLIALLYLARYPP----RIDGLVLSSPALGLGGAILR---LILARLALKLLGRIRP-KLPVDSNLLEGV 178 (298)
T ss_pred CCeEEEEeCcHHHHHHHHHHhCCc----cccEEEEECccccCChhHHH---HHHHHHhccccccccc-ccccCcccccCc
Confidence 899999999999999999998 76 99999999998766430000 0000000000000000 00000 00
Q ss_pred CC----CCcchHHHHhhh--hcccCCCccc-cCCCChH--HHHHHhcCCCCCcEEEEeeCCCCCCC-chhcHHHHHHHHH
Q 018555 239 DP----CSPITAQRYHSL--CAYMGDDDMF-SSDLSDD--QLKQRLGHMANTPCQVIFSMADEYVP-EYVDKKALVERLC 308 (354)
Q Consensus 239 ~~----~~~~~~~~~~~~--~~~~~~~~~~-~~~l~~~--~~~~~l~~i~~~PvLvi~G~~D~~vp-~~~~~~~~~~~~~ 308 (354)
.. ..+.....+..- +........| ...+... ........+++ |+|+++|++|.+++ .. ...+.+.
T Consensus 179 ~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~-PvLll~g~~D~vv~~~~----~~~~~~~ 253 (298)
T COG2267 179 LTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIAL-PVLLLQGGDDRVVDNVE----GLARFFE 253 (298)
T ss_pred CcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccC-CEEEEecCCCccccCcH----HHHHHHH
Confidence 00 001111111100 0000000000 0000000 11133557788 99999999999998 44 1333333
Q ss_pred HH-cCCCeEEEecCCCccc-Cc-cH--HHHHHHHHHHHHhhCC
Q 018555 309 RA-MGGAEKVEIEHGIHSL-SN-RV--KEAVQAIIDFVKREGP 346 (354)
Q Consensus 309 ~~-~~~~~~~~i~~agH~~-~~-~p--~~~~~~i~~Fl~~~~~ 346 (354)
+. .+++++++|+|+.|.+ .| +. +++.+.+.+|+.+..+
T Consensus 254 ~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 254 RAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEALP 296 (298)
T ss_pred hcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhcc
Confidence 32 4667899999999999 33 34 7889999999987543
No 42
>PRK10985 putative hydrolase; Provisional
Probab=99.88 E-value=6.6e-21 Score=177.37 Aligned_cols=243 Identities=16% Similarity=0.172 Sum_probs=149.6
Q ss_pred CeeEEEecC----CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCc-------cCcHHHH
Q 018555 83 PVQVAFKTG----DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSL-------QQDAMEI 151 (354)
Q Consensus 83 ~~~~~~~~~----~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~-------~~~~~dl 151 (354)
.+.+.|... ..+|+||++||++++. ...++..+++.|.++||+|+++|+ +|||.+.. ....+|+
T Consensus 43 ~~~l~w~~~~~~~~~~p~vll~HG~~g~~-~~~~~~~~~~~l~~~G~~v~~~d~----rG~g~~~~~~~~~~~~~~~~D~ 117 (324)
T PRK10985 43 FVDLAWSEDPAQARHKPRLVLFHGLEGSF-NSPYAHGLLEAAQKRGWLGVVMHF----RGCSGEPNRLHRIYHSGETEDA 117 (324)
T ss_pred EEEEecCCCCccCCCCCEEEEeCCCCCCC-cCHHHHHHHHHHHHCCCEEEEEeC----CCCCCCccCCcceECCCchHHH
Confidence 344555422 3468999999998432 234567899999999999999999 58876532 1246899
Q ss_pred HHHHHHHHhhCCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhh-cchh-----HHH-----HHH
Q 018555 152 DQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRA-TLPE-----TAA-----MID 219 (354)
Q Consensus 152 ~~~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~-~~~~-----~~~-----~~~ 219 (354)
.++++++.++++..+++++||||||.+++.++.+ ++ ...++++|++++..+..... .... ... +.+
T Consensus 118 ~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~--~~~~~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 195 (324)
T PRK10985 118 RFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGD--DLPLDAAVIVSAPLMLEACSYRMEQGFSRVYQRYLLNLLKA 195 (324)
T ss_pred HHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCC--CCCccEEEEEcCCCCHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 9999999988888899999999999998888877 43 11488888888765432111 0000 000 001
Q ss_pred HHHHHHhcCCCCCCCCCCCCC-CCcchHHHHhhhhccc--C---CCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCC
Q 018555 220 LASSMIREGRGSELMPREADP-CSPITAQRYHSLCAYM--G---DDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEY 293 (354)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~---~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~ 293 (354)
.+.+....... . .+..... ......+.|....... + ..+++. .......+.++++ |+|+|+|++|++
T Consensus 196 ~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~----~~~~~~~l~~i~~-P~lii~g~~D~~ 268 (324)
T PRK10985 196 NAARKLAAYPG-T-LPINLAQLKSVRRLREFDDLITARIHGFADAIDYYR----QCSALPLLNQIRK-PTLIIHAKDDPF 268 (324)
T ss_pred HHHHHHHhccc-c-ccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHH----HCChHHHHhCCCC-CEEEEecCCCCC
Confidence 11111111000 0 0000000 0001122222211111 0 011111 1113367789999 999999999999
Q ss_pred CCchhcHHHHHHHHHHHcCCCeEEEecCCCccc-Ccc----H-HHHHHHHHHHHHhh
Q 018555 294 VPEYVDKKALVERLCRAMGGAEKVEIEHGIHSL-SNR----V-KEAVQAIIDFVKRE 344 (354)
Q Consensus 294 vp~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~-~~~----p-~~~~~~i~~Fl~~~ 344 (354)
+++. ..+.+.+..++.++++++++||+. .+. + -+..+.+.+|++..
T Consensus 269 ~~~~-----~~~~~~~~~~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~ 320 (324)
T PRK10985 269 MTHE-----VIPKPESLPPNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTY 320 (324)
T ss_pred CChh-----hChHHHHhCCCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHh
Confidence 9876 455566677888999999999998 442 2 47888999999765
No 43
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.88 E-value=7.2e-22 Score=173.68 Aligned_cols=234 Identities=15% Similarity=0.164 Sum_probs=146.6
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCcc--------CcHHHHHHHHHHHHh--h
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQ--------QDAMEIDQLISYLIN--K 161 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~--------~~~~dl~~~i~~l~~--~ 161 (354)
..+..|+++||++. .+...+..++..|++.||.|+++|+ .|||.|+-- ..++|+....+.++. +
T Consensus 52 ~pr~lv~~~HG~g~--~~s~~~~~~a~~l~~~g~~v~a~D~----~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e 125 (313)
T KOG1455|consen 52 EPRGLVFLCHGYGE--HSSWRYQSTAKRLAKSGFAVYAIDY----EGHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREE 125 (313)
T ss_pred CCceEEEEEcCCcc--cchhhHHHHHHHHHhCCCeEEEeec----cCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhccc
Confidence 45668999999993 2335578899999999999999999 799999722 224555555555444 3
Q ss_pred CCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhh-cchhHHHHHHHHHHHHhcCCCCCCCCCCCC
Q 018555 162 DNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRA-TLPETAAMIDLASSMIREGRGSELMPREAD 239 (354)
Q Consensus 162 ~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (354)
....+.+|+||||||.+++.++.+ |. ..+|+|+++|........ ..+....++.....++-+-+ +.|....
T Consensus 126 ~~~lp~FL~GeSMGGAV~Ll~~~k~p~----~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~l~~liP~wk---~vp~~d~ 198 (313)
T KOG1455|consen 126 NKGLPRFLFGESMGGAVALLIALKDPN----FWDGAILVAPMCKISEDTKPHPPVISILTLLSKLIPTWK---IVPTKDI 198 (313)
T ss_pred cCCCCeeeeecCcchHHHHHHHhhCCc----ccccceeeecccccCCccCCCcHHHHHHHHHHHhCCcee---ecCCccc
Confidence 445689999999999999999997 88 999999999977543221 22222222222222221110 1111100
Q ss_pred C----CCcchHHHHh--hhhcccC--CCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHc
Q 018555 240 P----CSPITAQRYH--SLCAYMG--DDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAM 311 (354)
Q Consensus 240 ~----~~~~~~~~~~--~~~~~~~--~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~ 311 (354)
. ..+....... .++.... ....+.-.....++.+++.++++ |.||+||++|.++.+. ..+.+.+..
T Consensus 199 ~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtv-PflilHG~dD~VTDp~-----~Sk~Lye~A 272 (313)
T KOG1455|consen 199 IDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTV-PFLILHGTDDKVTDPK-----VSKELYEKA 272 (313)
T ss_pred cccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccc-cEEEEecCCCcccCcH-----HHHHHHHhc
Confidence 0 0110000000 0000000 00000000022356678899999 9999999999999887 455555544
Q ss_pred --CCCeEEEecCCCccc-C-c---cHHHHHHHHHHHHHhh
Q 018555 312 --GGAEKVEIEHGIHSL-S-N---RVKEAVQAIIDFVKRE 344 (354)
Q Consensus 312 --~~~~~~~i~~agH~~-~-~---~p~~~~~~i~~Fl~~~ 344 (354)
.+..+.+|||+-|.+ . | +-+.+...|.+||.+.
T Consensus 273 ~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 273 SSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred cCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 457899999999999 3 2 2246788899999753
No 44
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.88 E-value=1.1e-21 Score=214.00 Aligned_cols=236 Identities=17% Similarity=0.172 Sum_probs=145.8
Q ss_pred CCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccC-----------cHHHHHHHHHHHHhh
Q 018555 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ-----------DAMEIDQLISYLINK 161 (354)
Q Consensus 93 ~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~-----------~~~dl~~~i~~l~~~ 161 (354)
.+++|||+||++ .+...|..++..|.+ +|+|+++|+ +|||.|+... ..+++.+.+..+.++
T Consensus 1370 ~~~~vVllHG~~---~s~~~w~~~~~~L~~-~~rVi~~Dl----~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~ 1441 (1655)
T PLN02980 1370 EGSVVLFLHGFL---GTGEDWIPIMKAISG-SARCISIDL----PGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEH 1441 (1655)
T ss_pred CCCeEEEECCCC---CCHHHHHHHHHHHhC-CCEEEEEcC----CCCCCCCCccccccccccccCCHHHHHHHHHHHHHH
Confidence 468999999999 778889999999986 799999999 7999986431 245555555555556
Q ss_pred CCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchH--hhhcch-----hHHHHH-H-HHHHHHhcCCCC
Q 018555 162 DNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDRE--YRATLP-----ETAAMI-D-LASSMIREGRGS 231 (354)
Q Consensus 162 ~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~--~~~~~~-----~~~~~~-~-~~~~~~~~~~~~ 231 (354)
++.++++|+||||||.+++.++.+ |+ +|+++|++++..... ...... .....+ . ....+...-...
T Consensus 1442 l~~~~v~LvGhSmGG~iAl~~A~~~P~----~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~ 1517 (1655)
T PLN02980 1442 ITPGKVTLVGYSMGARIALYMALRFSD----KIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYSG 1517 (1655)
T ss_pred hCCCCEEEEEECHHHHHHHHHHHhChH----hhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhccH
Confidence 678899999999999999999998 88 999999987643211 000000 000000 0 000000000000
Q ss_pred CCCCCCCCCCCcchHHHHhhhhcccCC---CccccC--CCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHH
Q 018555 232 ELMPREADPCSPITAQRYHSLCAYMGD---DDMFSS--DLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVER 306 (354)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~ 306 (354)
.+..... ..+.....+......... ...+.. .....++.+.+.++++ |+|+|+|++|.+++ . ..++
T Consensus 1518 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~-PtLlI~Ge~D~~~~-~-----~a~~ 1588 (1655)
T PLN02980 1518 ELWKSLR--NHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDT-PLLLVVGEKDVKFK-Q-----IAQK 1588 (1655)
T ss_pred HHhhhhc--cCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCC-CEEEEEECCCCccH-H-----HHHH
Confidence 0000000 000000000000000000 000000 0012234467899999 99999999999775 3 3444
Q ss_pred HHHHcCC------------CeEEEecCCCccc-CccHHHHHHHHHHHHHhhCCCCC
Q 018555 307 LCRAMGG------------AEKVEIEHGIHSL-SNRVKEAVQAIIDFVKREGPKGW 349 (354)
Q Consensus 307 ~~~~~~~------------~~~~~i~~agH~~-~~~p~~~~~~i~~Fl~~~~~~~~ 349 (354)
+.+.+++ +++++|+++||++ .++|++|++.|.+||++...+..
T Consensus 1589 ~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~~~~~~~ 1644 (1655)
T PLN02980 1589 MYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTRLHNSST 1644 (1655)
T ss_pred HHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHhccccCC
Confidence 5555554 4799999999999 89999999999999998775543
No 45
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.88 E-value=4.7e-21 Score=177.06 Aligned_cols=108 Identities=18% Similarity=0.194 Sum_probs=81.0
Q ss_pred eeEEEecC--CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccC-----cHHHHHHHHH
Q 018555 84 VQVAFKTG--DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ-----DAMEIDQLIS 156 (354)
Q Consensus 84 ~~~~~~~~--~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~-----~~~dl~~~i~ 156 (354)
..++|... ..+++|||+||++ .+...+ .+...+...+|+|+++|+ +|||.|+.+. ..+++.+.+.
T Consensus 15 ~~l~y~~~g~~~~~~lvllHG~~---~~~~~~-~~~~~~~~~~~~vi~~D~----~G~G~S~~~~~~~~~~~~~~~~dl~ 86 (306)
T TIGR01249 15 HQLYYEQSGNPDGKPVVFLHGGP---GSGTDP-GCRRFFDPETYRIVLFDQ----RGCGKSTPHACLEENTTWDLVADIE 86 (306)
T ss_pred cEEEEEECcCCCCCEEEEECCCC---CCCCCH-HHHhccCccCCEEEEECC----CCCCCCCCCCCcccCCHHHHHHHHH
Confidence 34555432 2367899999977 333333 344455446899999999 7999987542 2456777777
Q ss_pred HHHhhCCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccC
Q 018555 157 YLINKDNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVS 203 (354)
Q Consensus 157 ~l~~~~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~ 203 (354)
.+.+.++.++++++||||||.+++.++.+ |+ +|+++|++++..
T Consensus 87 ~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~----~v~~lvl~~~~~ 130 (306)
T TIGR01249 87 KLREKLGIKNWLVFGGSWGSTLALAYAQTHPE----VVTGLVLRGIFL 130 (306)
T ss_pred HHHHHcCCCCEEEEEECHHHHHHHHHHHHChH----hhhhheeecccc
Confidence 77777778899999999999999999998 88 999999998754
No 46
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.87 E-value=9.7e-21 Score=172.10 Aligned_cols=235 Identities=17% Similarity=0.172 Sum_probs=140.3
Q ss_pred CCcEEEEECCCCC-CCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCcc-----CcHHHHHHHHHHHHhhC-CCC
Q 018555 93 YQQQVIFIGGLTD-GFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQ-----QDAMEIDQLISYLINKD-NSE 165 (354)
Q Consensus 93 ~~p~vIliHG~~~-~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~-----~~~~dl~~~i~~l~~~~-~~~ 165 (354)
.++.||++||.++ ..++...|..+++.|+++||+|+++|+ +|||.|... ...+|+.++++++.++. +.+
T Consensus 25 ~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl----~G~G~S~~~~~~~~~~~~d~~~~~~~l~~~~~g~~ 100 (274)
T TIGR03100 25 HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDY----RGMGDSEGENLGFEGIDADIAAAIDAFREAAPHLR 100 (274)
T ss_pred CCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCC----CCCCCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCC
Confidence 3456666666442 222344577889999989999999999 799988643 22468888999887654 567
Q ss_pred cEEEEEEChhHHHHHHHHHhcccccccccEEEEecccCchHhhhcchhHHHHHHHHHHHHhcCCC-CCCCCCCCCCCCcc
Q 018555 166 GVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLASSMIREGRG-SELMPREADPCSPI 244 (354)
Q Consensus 166 ~~~LvGhS~GG~~a~~~a~~p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 244 (354)
+++|+||||||.+++.++..+. +|+++|+++|......... ... ....+......+.. ..+++... ....
T Consensus 101 ~i~l~G~S~Gg~~a~~~a~~~~----~v~~lil~~p~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~g~~--~~~~ 171 (274)
T TIGR03100 101 RIVAWGLCDAASAALLYAPADL----RVAGLVLLNPWVRTEAAQA-ASR--IRHYYLGQLLSADFWRKLLSGEV--NLGS 171 (274)
T ss_pred cEEEEEECHHHHHHHHHhhhCC----CccEEEEECCccCCcccch-HHH--HHHHHHHHHhChHHHHHhcCCCc--cHHH
Confidence 8999999999999999986655 8999999998743221000 000 00000000000000 00111110 0000
Q ss_pred hHHHHhhh-h-c-ccCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHc--CCCeEEEe
Q 018555 245 TAQRYHSL-C-A-YMGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAM--GGAEKVEI 319 (354)
Q Consensus 245 ~~~~~~~~-~-~-~~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~--~~~~~~~i 319 (354)
....+... . . ........ ......+.+.|.++++ |+|+++|++|...+...+.-...+.+.+.+ ++++++.+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~-P~ll~~g~~D~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~ 248 (274)
T TIGR03100 172 SLRGLGDALLKARQKGDEVAH--GGLAERMKAGLERFQG-PVLFILSGNDLTAQEFADSVLGEPAWRGALEDPGIERVEI 248 (274)
T ss_pred HHHHHHHHHHhhhhcCCCccc--chHHHHHHHHHHhcCC-cEEEEEcCcchhHHHHHHHhccChhhHHHhhcCCeEEEec
Confidence 01111110 0 0 00100000 0023445567888899 999999999987532200000014566655 78999999
Q ss_pred cCCCccc-Cc-cHHHHHHHHHHHHHh
Q 018555 320 EHGIHSL-SN-RVKEAVQAIIDFVKR 343 (354)
Q Consensus 320 ~~agH~~-~~-~p~~~~~~i~~Fl~~ 343 (354)
++++|++ .+ .++++.+.|.+||++
T Consensus 249 ~~~~H~l~~e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 249 DGADHTFSDRVWREWVAARTTEWLRR 274 (274)
T ss_pred CCCCcccccHHHHHHHHHHHHHHHhC
Confidence 9999999 54 458999999999963
No 47
>PRK13604 luxD acyl transferase; Provisional
Probab=99.87 E-value=1.9e-20 Score=168.92 Aligned_cols=205 Identities=12% Similarity=0.113 Sum_probs=132.1
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCC-CCCCc-------cCcHHHHHHHHHHHHhhCC
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGY-GTSSL-------QQDAMEIDQLISYLINKDN 163 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~-G~S~~-------~~~~~dl~~~i~~l~~~~~ 163 (354)
.+.++||+.||++ ....++..+++.|+++||.|++||+| |+ |.|+. ....+|+..+++|+++. +
T Consensus 35 ~~~~~vIi~HGf~---~~~~~~~~~A~~La~~G~~vLrfD~r----g~~GeS~G~~~~~t~s~g~~Dl~aaid~lk~~-~ 106 (307)
T PRK13604 35 KKNNTILIASGFA---RRMDHFAGLAEYLSSNGFHVIRYDSL----HHVGLSSGTIDEFTMSIGKNSLLTVVDWLNTR-G 106 (307)
T ss_pred CCCCEEEEeCCCC---CChHHHHHHHHHHHHCCCEEEEecCC----CCCCCCCCccccCcccccHHHHHHHHHHHHhc-C
Confidence 3458999999999 55556899999999999999999995 54 77642 23478999999999875 5
Q ss_pred CCcEEEEEEChhHHHHHHHHHhcccccccccEEEEecccCchHhhhcchhHHHHHHHHHHHHhcCCCCCCCCCCC-CCCC
Q 018555 164 SEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLASSMIREGRGSELMPREA-DPCS 242 (354)
Q Consensus 164 ~~~~~LvGhS~GG~~a~~~a~~p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 242 (354)
.+++.|+||||||.+|+..|.. . .++++|+.+|..+.... +...........+-..++... ....
T Consensus 107 ~~~I~LiG~SmGgava~~~A~~-~----~v~~lI~~sp~~~l~d~---------l~~~~~~~~~~~p~~~lp~~~d~~g~ 172 (307)
T PRK13604 107 INNLGLIAASLSARIAYEVINE-I----DLSFLITAVGVVNLRDT---------LERALGYDYLSLPIDELPEDLDFEGH 172 (307)
T ss_pred CCceEEEEECHHHHHHHHHhcC-C----CCCEEEEcCCcccHHHH---------HHHhhhcccccCcccccccccccccc
Confidence 6789999999999998666653 3 59999999998874311 100000000000000010000 0000
Q ss_pred cchHHHHhhhhcccCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcC--CCeEEEec
Q 018555 243 PITAQRYHSLCAYMGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMG--GAEKVEIE 320 (354)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~--~~~~~~i~ 320 (354)
......+........ +. ......+.+.+++. |+|+|||.+|.+||.+ ..+.+.+..+ +++++++|
T Consensus 173 ~l~~~~f~~~~~~~~---~~----~~~s~i~~~~~l~~-PvLiIHG~~D~lVp~~-----~s~~l~e~~~s~~kkl~~i~ 239 (307)
T PRK13604 173 NLGSEVFVTDCFKHG---WD----TLDSTINKMKGLDI-PFIAFTANNDSWVKQS-----EVIDLLDSIRSEQCKLYSLI 239 (307)
T ss_pred cccHHHHHHHHHhcC---cc----ccccHHHHHhhcCC-CEEEEEcCCCCccCHH-----HHHHHHHHhccCCcEEEEeC
Confidence 111112221110000 00 01112255677888 9999999999999998 6666666554 68899999
Q ss_pred CCCcccCccHH
Q 018555 321 HGIHSLSNRVK 331 (354)
Q Consensus 321 ~agH~~~~~p~ 331 (354)
|++|.+.+++-
T Consensus 240 Ga~H~l~~~~~ 250 (307)
T PRK13604 240 GSSHDLGENLV 250 (307)
T ss_pred CCccccCcchH
Confidence 99999976653
No 48
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.87 E-value=5.8e-20 Score=175.76 Aligned_cols=212 Identities=17% Similarity=0.195 Sum_probs=138.3
Q ss_pred CCCcEEEEECCCCCCCCc-cccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCcc---CcH-HHHHHHHHHHHhh--CCC
Q 018555 92 DYQQQVIFIGGLTDGFFA-TEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQ---QDA-MEIDQLISYLINK--DNS 164 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~-~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~---~~~-~dl~~~i~~l~~~--~~~ 164 (354)
++.|+||++||++ .. ..+|..+++.|+++||+|+++|+ +|+|.|... .+. ....++++++... ++.
T Consensus 192 ~~~P~Vli~gG~~---~~~~~~~~~~~~~La~~Gy~vl~~D~----pG~G~s~~~~~~~d~~~~~~avld~l~~~~~vd~ 264 (414)
T PRK05077 192 GPFPTVLVCGGLD---SLQTDYYRLFRDYLAPRGIAMLTIDM----PSVGFSSKWKLTQDSSLLHQAVLNALPNVPWVDH 264 (414)
T ss_pred CCccEEEEeCCcc---cchhhhHHHHHHHHHhCCCEEEEECC----CCCCCCCCCCccccHHHHHHHHHHHHHhCcccCc
Confidence 4567888888876 33 35688889999989999999999 799988542 222 2335677887653 356
Q ss_pred CcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhhcchhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCc
Q 018555 165 EGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLASSMIREGRGSELMPREADPCSP 243 (354)
Q Consensus 165 ~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (354)
+++.|+||||||.+++.+|.. |+ +|+++|+++|+........ .....+.......+..... .+ ..
T Consensus 265 ~ri~l~G~S~GG~~Al~~A~~~p~----ri~a~V~~~~~~~~~~~~~-~~~~~~p~~~~~~la~~lg---~~----~~-- 330 (414)
T PRK05077 265 TRVAAFGFRFGANVAVRLAYLEPP----RLKAVACLGPVVHTLLTDP-KRQQQVPEMYLDVLASRLG---MH----DA-- 330 (414)
T ss_pred ccEEEEEEChHHHHHHHHHHhCCc----CceEEEEECCccchhhcch-hhhhhchHHHHHHHHHHhC---CC----CC--
Confidence 899999999999999999987 77 9999999998764211000 0000000001111111000 00 00
Q ss_pred chHHHHhhhhcccCCCccccCCCChHHHHHHh-cCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCCeEEEecCC
Q 018555 244 ITAQRYHSLCAYMGDDDMFSSDLSDDQLKQRL-GHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGGAEKVEIEHG 322 (354)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l-~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~i~~a 322 (354)
....+...... +. +... ..+ .++++ |+|+|+|++|.++|.. ..+.+.+..++.++++++++
T Consensus 331 -~~~~l~~~l~~------~s--l~~~---~~l~~~i~~-PvLiI~G~~D~ivP~~-----~a~~l~~~~~~~~l~~i~~~ 392 (414)
T PRK05077 331 -SDEALRVELNR------YS--LKVQ---GLLGRRCPT-PMLSGYWKNDPFSPEE-----DSRLIASSSADGKLLEIPFK 392 (414)
T ss_pred -ChHHHHHHhhh------cc--chhh---hhhccCCCC-cEEEEecCCCCCCCHH-----HHHHHHHhCCCCeEEEccCC
Confidence 00111110000 00 0000 112 57889 9999999999999988 67777888899999999997
Q ss_pred CcccCccHHHHHHHHHHHHHhh
Q 018555 323 IHSLSNRVKEAVQAIIDFVKRE 344 (354)
Q Consensus 323 gH~~~~~p~~~~~~i~~Fl~~~ 344 (354)
| ..+.++++.+.|.+||++.
T Consensus 393 -~-~~e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 393 -P-VYRNFDKALQEISDWLEDR 412 (414)
T ss_pred -C-ccCCHHHHHHHHHHHHHHH
Confidence 2 2568999999999999864
No 49
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.87 E-value=6.2e-21 Score=160.10 Aligned_cols=215 Identities=13% Similarity=0.170 Sum_probs=142.8
Q ss_pred CcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCC-------ccCcHHHHHHHHHHHHhhCCCCc
Q 018555 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSS-------LQQDAMEIDQLISYLINKDNSEG 166 (354)
Q Consensus 94 ~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~-------~~~~~~dl~~~i~~l~~~~~~~~ 166 (354)
+..|||||||+ ++..-.+.|++.|.++||+|.+|.+ +|||... ..++.+++.+..++|.+ .+++.
T Consensus 15 ~~AVLllHGFT---Gt~~Dvr~Lgr~L~e~GyTv~aP~y----pGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~-~gy~e 86 (243)
T COG1647 15 NRAVLLLHGFT---GTPRDVRMLGRYLNENGYTVYAPRY----PGHGTLPEDFLKTTPRDWWEDVEDGYRDLKE-AGYDE 86 (243)
T ss_pred CEEEEEEeccC---CCcHHHHHHHHHHHHCCceEecCCC----CCCCCCHHHHhcCCHHHHHHHHHHHHHHHHH-cCCCe
Confidence 48999999999 7888889999999999999999999 8999864 23445666677777764 46789
Q ss_pred EEEEEEChhHHHHHHHHHhcccccccccEEEEecccCch-HhhhcchhHHHHHHHHHHHHh-cCCCCCCCCCCCCCCCcc
Q 018555 167 VVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDR-EYRATLPETAAMIDLASSMIR-EGRGSELMPREADPCSPI 244 (354)
Q Consensus 167 ~~LvGhS~GG~~a~~~a~~p~~~~~~v~~lIl~~p~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 244 (354)
|.++|-||||.+++.+|..- .++++|.+++.... .+.... ..++.+++++-. ++. ..+.
T Consensus 87 I~v~GlSmGGv~alkla~~~-----p~K~iv~m~a~~~~k~~~~ii---e~~l~y~~~~kk~e~k-----------~~e~ 147 (243)
T COG1647 87 IAVVGLSMGGVFALKLAYHY-----PPKKIVPMCAPVNVKSWRIII---EGLLEYFRNAKKYEGK-----------DQEQ 147 (243)
T ss_pred EEEEeecchhHHHHHHHhhC-----CccceeeecCCcccccchhhh---HHHHHHHHHhhhccCC-----------CHHH
Confidence 99999999999999999872 36788887765442 221111 223333322211 100 0000
Q ss_pred hHHHHhhhhc-ccCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHc--CCCeEEEecC
Q 018555 245 TAQRYHSLCA-YMGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAM--GGAEKVEIEH 321 (354)
Q Consensus 245 ~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~--~~~~~~~i~~ 321 (354)
....+..... +.....-+. -.-...+..+..|.. |+++++|.+|++||.+ .++.+.+.. ...++.++++
T Consensus 148 ~~~e~~~~~~~~~~~~~~~~--~~i~~~~~~~~~I~~-pt~vvq~~~D~mv~~~-----sA~~Iy~~v~s~~KeL~~~e~ 219 (243)
T COG1647 148 IDKEMKSYKDTPMTTTAQLK--KLIKDARRSLDKIYS-PTLVVQGRQDEMVPAE-----SANFIYDHVESDDKELKWLEG 219 (243)
T ss_pred HHHHHHHhhcchHHHHHHHH--HHHHHHHhhhhhccc-chhheecccCCCCCHH-----HHHHHHHhccCCcceeEEEcc
Confidence 1111111000 000000000 011234467788999 9999999999999987 455555443 3478999999
Q ss_pred CCccc-Cc-cHHHHHHHHHHHHHh
Q 018555 322 GIHSL-SN-RVKEAVQAIIDFVKR 343 (354)
Q Consensus 322 agH~~-~~-~p~~~~~~i~~Fl~~ 343 (354)
.||.+ .+ +.+.+.+.|.+||+.
T Consensus 220 SgHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 220 SGHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred CCceeecchhHHHHHHHHHHHhhC
Confidence 99999 44 678999999999973
No 50
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.86 E-value=2.5e-20 Score=173.90 Aligned_cols=240 Identities=13% Similarity=0.129 Sum_probs=135.2
Q ss_pred cCCCCcEEEEECCCCCCCCcc--------------------c---cHHHHHHHHhhCCcEEEEEcccccCCCCCCCCcc-
Q 018555 90 TGDYQQQVIFIGGLTDGFFAT--------------------E---YLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQ- 145 (354)
Q Consensus 90 ~~~~~p~vIliHG~~~~~~~~--------------------~---~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~- 145 (354)
....+.+||++||+++..... + |...+++.|.++||+|+++|+ +|||.|...
T Consensus 17 ~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~----rGHG~S~~~~ 92 (332)
T TIGR01607 17 VKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDL----QGHGESDGLQ 92 (332)
T ss_pred ccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEecc----cccCCCcccc
Confidence 335678999999999643210 0 125789999989999999999 699987632
Q ss_pred ----------CcHHHHHHHHHHHHh-------------------hCC-CCcEEEEEEChhHHHHHHHHHh-cccc----c
Q 018555 146 ----------QDAMEIDQLISYLIN-------------------KDN-SEGVVLLGHSTGCQDIVHYMRA-NAAC----S 190 (354)
Q Consensus 146 ----------~~~~dl~~~i~~l~~-------------------~~~-~~~~~LvGhS~GG~~a~~~a~~-p~~~----~ 190 (354)
+.++|+.++++.+.+ ... ..+++|+||||||.+++.++.+ ++.. .
T Consensus 93 ~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~ 172 (332)
T TIGR01607 93 NLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLGKSNENNDK 172 (332)
T ss_pred ccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhccccccccc
Confidence 113455556655543 122 3579999999999999999875 3211 1
Q ss_pred ccccEEEEecccCchHhhh-----cchh-HHHHHHHHHHHHhcCCCCCCCCCCCCCCCcchHHHHhh--hhcccC-CCcc
Q 018555 191 RAVRAAIFQAPVSDREYRA-----TLPE-TAAMIDLASSMIREGRGSELMPREADPCSPITAQRYHS--LCAYMG-DDDM 261 (354)
Q Consensus 191 ~~v~~lIl~~p~~~~~~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~ 261 (354)
..++++|+++|........ .... ...++.....+...-.. .........+.....+.. +..... ...+
T Consensus 173 ~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~---~~~~~~~~~~~~~~~~~~Dp~~~~~~~s~~~ 249 (332)
T TIGR01607 173 LNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRI---SKKIRYEKSPYVNDIIKFDKFRYDGGITFNL 249 (332)
T ss_pred cccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccc---cCccccccChhhhhHHhcCccccCCcccHHH
Confidence 2689999988865321100 0000 01111111111110000 000000011111111000 000000 0000
Q ss_pred ccCCCC-hHHHHHHhcCC--CCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHc--CCCeEEEecCCCccc-Cc-cHHHHH
Q 018555 262 FSSDLS-DDQLKQRLGHM--ANTPCQVIFSMADEYVPEYVDKKALVERLCRAM--GGAEKVEIEHGIHSL-SN-RVKEAV 334 (354)
Q Consensus 262 ~~~~l~-~~~~~~~l~~i--~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~--~~~~~~~i~~agH~~-~~-~p~~~~ 334 (354)
+...+. ...+...+.++ ++ |+|+|+|++|.+++.. ..+.+.+.. ++.+++++++++|.+ .+ +.+++.
T Consensus 250 ~~~l~~~~~~~~~~~~~i~~~~-P~Lii~G~~D~vv~~~-----~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~v~ 323 (332)
T TIGR01607 250 ASELIKATDTLDCDIDYIPKDI-PILFIHSKGDCVCSYE-----GTVSFYNKLSISNKELHTLEDMDHVITIEPGNEEVL 323 (332)
T ss_pred HHHHHHHHHHHHhhHhhCCCCC-CEEEEEeCCCCccCHH-----HHHHHHHhccCCCcEEEEECCCCCCCccCCCHHHHH
Confidence 000000 01122345555 67 9999999999999877 455555443 568899999999999 44 468999
Q ss_pred HHHHHHHH
Q 018555 335 QAIIDFVK 342 (354)
Q Consensus 335 ~~i~~Fl~ 342 (354)
+.|.+||+
T Consensus 324 ~~i~~wL~ 331 (332)
T TIGR01607 324 KKIIEWIS 331 (332)
T ss_pred HHHHHHhh
Confidence 99999986
No 51
>PRK05855 short chain dehydrogenase; Validated
Probab=99.85 E-value=3.8e-20 Score=185.37 Aligned_cols=238 Identities=18% Similarity=0.127 Sum_probs=129.9
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccC-----cHHHHHHHHHHHHhhCCCC-
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ-----DAMEIDQLISYLINKDNSE- 165 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~-----~~~dl~~~i~~l~~~~~~~- 165 (354)
+.+|+|||+||++ .+...|..+++.|+ ++|+|+++|+ +|||.|+.+. ..+++.+.+..+.+.++..
T Consensus 23 ~~~~~ivllHG~~---~~~~~w~~~~~~L~-~~~~Vi~~D~----~G~G~S~~~~~~~~~~~~~~a~dl~~~i~~l~~~~ 94 (582)
T PRK05855 23 PDRPTVVLVHGYP---DNHEVWDGVAPLLA-DRFRVVAYDV----RGAGRSSAPKRTAAYTLARLADDFAAVIDAVSPDR 94 (582)
T ss_pred CCCCeEEEEcCCC---chHHHHHHHHHHhh-cceEEEEecC----CCCCCCCCCCcccccCHHHHHHHHHHHHHHhCCCC
Confidence 3478999999999 77888999999996 5999999999 7999997432 2333333333333333444
Q ss_pred cEEEEEEChhHHHHHHHHHhcccccccccEEEEecccCchHhhh----cc----h-hHHHHHHHHHHHH-hcCCCCCCCC
Q 018555 166 GVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDREYRA----TL----P-ETAAMIDLASSMI-REGRGSELMP 235 (354)
Q Consensus 166 ~~~LvGhS~GG~~a~~~a~~p~~~~~~v~~lIl~~p~~~~~~~~----~~----~-~~~~~~~~~~~~~-~~~~~~~~~~ 235 (354)
+++|+||||||.+++.++.+++. ..++..++.+++........ .. + ............. ........++
T Consensus 95 ~~~lvGhS~Gg~~a~~~a~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (582)
T PRK05855 95 PVHLLAHDWGSIQGWEAVTRPRA-AGRIASFTSVSGPSLDHVGFWLRSGLRRPTPRRLARALGQLLRSWYIYLFHLPVLP 173 (582)
T ss_pred cEEEEecChHHHHHHHHHhCccc-hhhhhhheeccCCchHHHHHHHhhcccccchhhhhHHHHHHhhhHHHHHHhCCCCc
Confidence 49999999999999988876321 11444444433221100000 00 0 0000000000000 0000000000
Q ss_pred CCCC-CCCcchHHHHhhhhcccCCC---------cc------ccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhc
Q 018555 236 READ-PCSPITAQRYHSLCAYMGDD---------DM------FSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVD 299 (354)
Q Consensus 236 ~~~~-~~~~~~~~~~~~~~~~~~~~---------~~------~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~ 299 (354)
.... ........+........... +. +............+..+++ |+|+|+|++|.++|..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~lii~G~~D~~v~~~-- 250 (582)
T PRK05855 174 ELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSRPRERYTDV-PVQLIVPTGDPYVRPA-- 250 (582)
T ss_pred HHHhccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhccCccCCccC-ceEEEEeCCCcccCHH--
Confidence 0000 00000000000000000000 00 0000000001112345889 9999999999999987
Q ss_pred HHHHHHHHHHHcCCCeEEEecCCCccc-CccHHHHHHHHHHHHHhhC
Q 018555 300 KKALVERLCRAMGGAEKVEIEHGIHSL-SNRVKEAVQAIIDFVKREG 345 (354)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~i~~agH~~-~~~p~~~~~~i~~Fl~~~~ 345 (354)
..+.+.+..++.++++++ +||++ .++|+++.+.|.+|+.+..
T Consensus 251 ---~~~~~~~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~~~ 293 (582)
T PRK05855 251 ---LYDDLSRWVPRLWRREIK-AGHWLPMSHPQVLAAAVAEFVDAVE 293 (582)
T ss_pred ---HhccccccCCcceEEEcc-CCCcchhhChhHHHHHHHHHHHhcc
Confidence 666777777888887775 79999 8999999999999998753
No 52
>PRK10566 esterase; Provisional
Probab=99.84 E-value=3e-19 Score=159.84 Aligned_cols=203 Identities=15% Similarity=0.138 Sum_probs=123.0
Q ss_pred CCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCcc--------------CcHHHHHHHHHHH
Q 018555 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQ--------------QDAMEIDQLISYL 158 (354)
Q Consensus 93 ~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~--------------~~~~dl~~~i~~l 158 (354)
..|+|||+||++ .+...|..+++.|+++||+|+++|+ +|+|.+... ...+|+.++++++
T Consensus 26 ~~p~vv~~HG~~---~~~~~~~~~~~~l~~~G~~v~~~d~----~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 98 (249)
T PRK10566 26 PLPTVFFYHGFT---SSKLVYSYFAVALAQAGFRVIMPDA----PMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAI 98 (249)
T ss_pred CCCEEEEeCCCC---cccchHHHHHHHHHhCCCEEEEecC----CcccccCCCccccchhhHHHHHHHHHHHHHHHHHHH
Confidence 468999999998 6666788899999989999999999 578764211 1245666777777
Q ss_pred Hhh--CCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhhcchhHHHHHHHHHHHHhcCCCCCCCC
Q 018555 159 INK--DNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLASSMIREGRGSELMP 235 (354)
Q Consensus 159 ~~~--~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (354)
.+. .+.++++|+||||||.+++.++.+ |+ ....+++..+..... . .+..... ...
T Consensus 99 ~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~----~~~~~~~~~~~~~~~----------~----~~~~~~~---~~~- 156 (249)
T PRK10566 99 REEGWLLDDRLAVGGASMGGMTALGIMARHPW----VKCVASLMGSGYFTS----------L----ARTLFPP---LIP- 156 (249)
T ss_pred HhcCCcCccceeEEeecccHHHHHHHHHhCCC----eeEEEEeeCcHHHHH----------H----HHHhccc---ccc-
Confidence 664 456799999999999999999887 54 333334433211000 0 0000000 000
Q ss_pred CCCCCCCcchHHHHhhhhcccCCCccccCCCChHHHHHHhcCC-CCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHc-C-
Q 018555 236 READPCSPITAQRYHSLCAYMGDDDMFSSDLSDDQLKQRLGHM-ANTPCQVIFSMADEYVPEYVDKKALVERLCRAM-G- 312 (354)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~i-~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~-~- 312 (354)
..+.....+........ .+ +....+.++ ++ |+|+|+|++|.++|.. ....+.+.+.+.. +
T Consensus 157 -----~~~~~~~~~~~~~~~~~--~~--------~~~~~~~~i~~~-P~Lii~G~~D~~v~~~-~~~~l~~~l~~~g~~~ 219 (249)
T PRK10566 157 -----ETAAQQAEFNNIVAPLA--EW--------EVTHQLEQLADR-PLLLWHGLADDVVPAA-ESLRLQQALRERGLDK 219 (249)
T ss_pred -----cccccHHHHHHHHHHHh--hc--------ChhhhhhhcCCC-CEEEEEcCCCCcCCHH-HHHHHHHHHHhcCCCc
Confidence 00000011111000000 00 011345565 68 9999999999999987 2233344443321 1
Q ss_pred CCeEEEecCCCcccCccHHHHHHHHHHHHHhh
Q 018555 313 GAEKVEIEHGIHSLSNRVKEAVQAIIDFVKRE 344 (354)
Q Consensus 313 ~~~~~~i~~agH~~~~~p~~~~~~i~~Fl~~~ 344 (354)
+.+++++++++|.+. ....+.+.+||++.
T Consensus 220 ~~~~~~~~~~~H~~~---~~~~~~~~~fl~~~ 248 (249)
T PRK10566 220 NLTCLWEPGVRHRIT---PEALDAGVAFFRQH 248 (249)
T ss_pred ceEEEecCCCCCccC---HHHHHHHHHHHHhh
Confidence 256778999999974 24678888999853
No 53
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.83 E-value=1.1e-19 Score=162.47 Aligned_cols=233 Identities=16% Similarity=0.186 Sum_probs=140.6
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhh-CCcEEEEEcccccCCCCCCCCcc------CcHHHHHHHHHHHHhhCCC
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDK-ERWSLVQFLMTSSYTGYGTSSLQ------QDAMEIDQLISYLINKDNS 164 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~-~g~~Via~D~R~~~~G~G~S~~~------~~~~dl~~~i~~l~~~~~~ 164 (354)
...|++|++||+- ++...|..++..|++ .+..|+++|. +-||.|..- ..++|+..+++........
T Consensus 50 ~~~Pp~i~lHGl~---GS~~Nw~sv~k~Ls~~l~~~v~~vd~----RnHG~Sp~~~~h~~~~ma~dv~~Fi~~v~~~~~~ 122 (315)
T KOG2382|consen 50 ERAPPAIILHGLL---GSKENWRSVAKNLSRKLGRDVYAVDV----RNHGSSPKITVHNYEAMAEDVKLFIDGVGGSTRL 122 (315)
T ss_pred CCCCceEEecccc---cCCCCHHHHHHHhcccccCceEEEec----ccCCCCccccccCHHHHHHHHHHHHHHccccccc
Confidence 5689999999988 788899999999986 6889999999 588888632 2355666666666533346
Q ss_pred CcEEEEEEChhH-HHHHHHHHh-cccccccccEEEEecccCchHhhhcchhHHHHHHHHHHHHhcCCC-------CCCCC
Q 018555 165 EGVVLLGHSTGC-QDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLASSMIREGRG-------SELMP 235 (354)
Q Consensus 165 ~~~~LvGhS~GG-~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 235 (354)
.+++|+|||||| .+++.++.+ |+ .+..+|++.-..... .... .+..+.+..++.-... .++++
T Consensus 123 ~~~~l~GHsmGG~~~~m~~t~~~p~----~~~rliv~D~sP~~~-~~~~---~e~~e~i~~m~~~d~~~~~~~~rke~~~ 194 (315)
T KOG2382|consen 123 DPVVLLGHSMGGVKVAMAETLKKPD----LIERLIVEDISPGGV-GRSY---GEYRELIKAMIQLDLSIGVSRGRKEALK 194 (315)
T ss_pred CCceecccCcchHHHHHHHHHhcCc----ccceeEEEecCCccC-Cccc---chHHHHHHHHHhccccccccccHHHHHH
Confidence 789999999999 666666666 77 888888764222100 0000 0011111111110000 00000
Q ss_pred CCCCCCCcchHHHHhhh-hcccCCCcc--ccCCCC--hH--------HHHHHh--cCCCCCcEEEEeeCCCCCCCchhcH
Q 018555 236 READPCSPITAQRYHSL-CAYMGDDDM--FSSDLS--DD--------QLKQRL--GHMANTPCQVIFSMADEYVPEYVDK 300 (354)
Q Consensus 236 ~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~l~--~~--------~~~~~l--~~i~~~PvLvi~G~~D~~vp~~~~~ 300 (354)
....-......+.|... ......... |..++. .+ .....+ +.... |||+|+|.++.++|.+
T Consensus 195 ~l~~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~-pvlfi~g~~S~fv~~~--- 270 (315)
T KOG2382|consen 195 SLIEVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTG-PVLFIKGLQSKFVPDE--- 270 (315)
T ss_pred HHHHHhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhccccccccccccc-ceeEEecCCCCCcChh---
Confidence 00000000001111100 000000000 000000 00 000111 45566 9999999999999988
Q ss_pred HHHHHHHHHHcCCCeEEEecCCCccc-CccHHHHHHHHHHHHHhhC
Q 018555 301 KALVERLCRAMGGAEKVEIEHGIHSL-SNRVKEAVQAIIDFVKREG 345 (354)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~i~~agH~~-~~~p~~~~~~i~~Fl~~~~ 345 (354)
....+.+.+|.++++++++|||++ .|+|++|++.|.+|+++.+
T Consensus 271 --~~~~~~~~fp~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~~ 314 (315)
T KOG2382|consen 271 --HYPRMEKIFPNVEVHELDEAGHWVHLEKPEEFIESISEFLEEPE 314 (315)
T ss_pred --HHHHHHHhccchheeecccCCceeecCCHHHHHHHHHHHhcccC
Confidence 677888889999999999999999 8999999999999998654
No 54
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.82 E-value=6.1e-19 Score=144.20 Aligned_cols=143 Identities=24% Similarity=0.351 Sum_probs=111.9
Q ss_pred EEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHh-hCCCCcEEEEEECh
Q 018555 96 QVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLIN-KDNSEGVVLLGHST 174 (354)
Q Consensus 96 ~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~-~~~~~~~~LvGhS~ 174 (354)
+|||+||++ .+...|..+++.|+++||.|+.+|+ +++|.+... .++.++++.+.. ..+..+++|+|||+
T Consensus 1 ~vv~~HG~~---~~~~~~~~~~~~l~~~G~~v~~~~~----~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~l~G~S~ 70 (145)
T PF12695_consen 1 VVVLLHGWG---GSRRDYQPLAEALAEQGYAVVAFDY----PGHGDSDGA---DAVERVLADIRAGYPDPDRIILIGHSM 70 (145)
T ss_dssp EEEEECTTT---TTTHHHHHHHHHHHHTTEEEEEESC----TTSTTSHHS---HHHHHHHHHHHHHHCTCCEEEEEEETH
T ss_pred CEEEECCCC---CCHHHHHHHHHHHHHCCCEEEEEec----CCCCccchh---HHHHHHHHHHHhhcCCCCcEEEEEEcc
Confidence 699999999 6677799999999999999999999 788887333 356666666533 23678999999999
Q ss_pred hHHHHHHHHHhcccccccccEEEEecccCchHhhhcchhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcchHHHHhhhhc
Q 018555 175 GCQDIVHYMRANAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLASSMIREGRGSELMPREADPCSPITAQRYHSLCA 254 (354)
Q Consensus 175 GG~~a~~~a~~p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (354)
||.+++.++.+.. +++++|+++|....
T Consensus 71 Gg~~a~~~~~~~~----~v~~~v~~~~~~~~------------------------------------------------- 97 (145)
T PF12695_consen 71 GGAIAANLAARNP----RVKAVVLLSPYPDS------------------------------------------------- 97 (145)
T ss_dssp HHHHHHHHHHHST----TESEEEEESESSGC-------------------------------------------------
T ss_pred CcHHHHHHhhhcc----ceeEEEEecCccch-------------------------------------------------
Confidence 9999999998744 89999998872000
Q ss_pred ccCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcC-CCeEEEecCCCcc
Q 018555 255 YMGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMG-GAEKVEIEHGIHS 325 (354)
Q Consensus 255 ~~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~-~~~~~~i~~agH~ 325 (354)
+.+.+.+. |+++++|++|.++|.+ ..+++.+.++ +.+++++++++|+
T Consensus 98 ------------------~~~~~~~~-pv~~i~g~~D~~~~~~-----~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 98 ------------------EDLAKIRI-PVLFIHGENDPLVPPE-----QVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp ------------------HHHTTTTS-EEEEEEETT-SSSHHH-----HHHHHHHHHCSSEEEEEETTS-TT
T ss_pred ------------------hhhhccCC-cEEEEEECCCCcCCHH-----HHHHHHHHcCCCcEEEEeCCCcCc
Confidence 33445667 9999999999999876 5666666555 5789999999995
No 55
>PRK11071 esterase YqiA; Provisional
Probab=99.81 E-value=2.3e-18 Score=147.68 Aligned_cols=183 Identities=13% Similarity=0.149 Sum_probs=117.1
Q ss_pred cEEEEECCCCCCCCccccHH--HHHHHHhh--CCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhhCCCCcEEEE
Q 018555 95 QQVIFIGGLTDGFFATEYLE--PLAIALDK--ERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLL 170 (354)
Q Consensus 95 p~vIliHG~~~~~~~~~~~~--~la~~La~--~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~~~~~~~~Lv 170 (354)
|+|||+||++ ++...|. .+...|++ .+|+|+++|+ +||+ ++..+.++.+.++++.++++|+
T Consensus 2 p~illlHGf~---ss~~~~~~~~~~~~l~~~~~~~~v~~~dl----~g~~--------~~~~~~l~~l~~~~~~~~~~lv 66 (190)
T PRK11071 2 STLLYLHGFN---SSPRSAKATLLKNWLAQHHPDIEMIVPQL----PPYP--------ADAAELLESLVLEHGGDPLGLV 66 (190)
T ss_pred CeEEEECCCC---CCcchHHHHHHHHHHHHhCCCCeEEeCCC----CCCH--------HHHHHHHHHHHHHcCCCCeEEE
Confidence 5899999999 6666676 35566654 3799999999 6774 3555666666666678899999
Q ss_pred EEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhhcchhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcchHHHH
Q 018555 171 GHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLASSMIREGRGSELMPREADPCSPITAQRY 249 (354)
Q Consensus 171 GhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (354)
||||||.+++.++.+ |. ++|+++|...+.. . .+.+..... ...... ..... ..+
T Consensus 67 G~S~Gg~~a~~~a~~~~~-------~~vl~~~~~~~~~---------~---~~~~~~~~~-~~~~~~----~~~~~-~~~ 121 (190)
T PRK11071 67 GSSLGGYYATWLSQCFML-------PAVVVNPAVRPFE---------L---LTDYLGENE-NPYTGQ----QYVLE-SRH 121 (190)
T ss_pred EECHHHHHHHHHHHHcCC-------CEEEECCCCCHHH---------H---HHHhcCCcc-cccCCC----cEEEc-HHH
Confidence 999999999999988 42 3588888655311 1 011111100 000000 00111 111
Q ss_pred hhhhcccCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCCeEEEecCCCcccCcc
Q 018555 250 HSLCAYMGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGGAEKVEIEHGIHSLSNR 329 (354)
Q Consensus 250 ~~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~~ 329 (354)
..-.... + . ..+. ..+ |+++|||++|++||.+ ...++.+ ++++++++|++|.+.+.
T Consensus 122 ~~d~~~~---~----------~-~~i~-~~~-~v~iihg~~De~V~~~-----~a~~~~~---~~~~~~~~ggdH~f~~~ 177 (190)
T PRK11071 122 IYDLKVM---Q----------I-DPLE-SPD-LIWLLQQTGDEVLDYR-----QAVAYYA---ACRQTVEEGGNHAFVGF 177 (190)
T ss_pred HHHHHhc---C----------C-ccCC-Chh-hEEEEEeCCCCcCCHH-----HHHHHHH---hcceEEECCCCcchhhH
Confidence 1100000 0 0 1122 556 8899999999999988 5555554 45778899999999433
Q ss_pred HHHHHHHHHHHHH
Q 018555 330 VKEAVQAIIDFVK 342 (354)
Q Consensus 330 p~~~~~~i~~Fl~ 342 (354)
+++.+.|.+|++
T Consensus 178 -~~~~~~i~~fl~ 189 (190)
T PRK11071 178 -ERYFNQIVDFLG 189 (190)
T ss_pred -HHhHHHHHHHhc
Confidence 889999999975
No 56
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.80 E-value=6e-19 Score=145.70 Aligned_cols=231 Identities=16% Similarity=0.142 Sum_probs=142.9
Q ss_pred eeEEEec-CCCCcEEEEECCCCCCCCccccHHHHHHHHhh-CCcEEEEEcccccCCCCCCCCccCc-------HHHHHHH
Q 018555 84 VQVAFKT-GDYQQQVIFIGGLTDGFFATEYLEPLAIALDK-ERWSLVQFLMTSSYTGYGTSSLQQD-------AMEIDQL 154 (354)
Q Consensus 84 ~~~~~~~-~~~~p~vIliHG~~~~~~~~~~~~~la~~La~-~g~~Via~D~R~~~~G~G~S~~~~~-------~~dl~~~ 154 (354)
..+.|.. +.....|+++.|.-+ +...-|.+....|.+ .-+++++.|- +|||.|..++. .+|.+.+
T Consensus 31 ~ql~y~~~G~G~~~iLlipGalG--s~~tDf~pql~~l~k~l~~TivawDP----pGYG~SrPP~Rkf~~~ff~~Da~~a 104 (277)
T KOG2984|consen 31 TQLGYCKYGHGPNYILLIPGALG--SYKTDFPPQLLSLFKPLQVTIVAWDP----PGYGTSRPPERKFEVQFFMKDAEYA 104 (277)
T ss_pred ceeeeeecCCCCceeEecccccc--cccccCCHHHHhcCCCCceEEEEECC----CCCCCCCCCcccchHHHHHHhHHHH
Confidence 3344432 344567888888552 233336555555544 3499999999 89999976543 3455555
Q ss_pred HHHHHhhCCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCch--HhhhcchhHHHHHHHHHHHHhcCCCC
Q 018555 155 ISYLINKDNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDR--EYRATLPETAAMIDLASSMIREGRGS 231 (354)
Q Consensus 155 i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (354)
++-+. .+..+++.|+|+|-||.+++..|++ ++ .|.++|+.+..... +....+....+. .++...++.
T Consensus 105 vdLM~-aLk~~~fsvlGWSdGgiTalivAak~~e----~v~rmiiwga~ayvn~~~~ma~kgiRdv----~kWs~r~R~- 174 (277)
T KOG2984|consen 105 VDLME-ALKLEPFSVLGWSDGGITALIVAAKGKE----KVNRMIIWGAAAYVNHLGAMAFKGIRDV----NKWSARGRQ- 174 (277)
T ss_pred HHHHH-HhCCCCeeEeeecCCCeEEEEeeccChh----hhhhheeecccceecchhHHHHhchHHH----hhhhhhhcc-
Confidence 54443 3457999999999999999999999 88 99999987653321 111111111111 111111110
Q ss_pred CCCCCCCCC-CCcchHHHHhhhhcccCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHH
Q 018555 232 ELMPREADP-CSPITAQRYHSLCAYMGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRA 310 (354)
Q Consensus 232 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~ 310 (354)
.+. ..+.+ ..+.....|... ...+.. .-....++..+++++| |+||+||++|++++.. .+.-+...
T Consensus 175 P~e-~~Yg~e~f~~~wa~wvD~-----v~qf~~-~~dG~fCr~~lp~vkc-Ptli~hG~kDp~~~~~-----hv~fi~~~ 241 (277)
T KOG2984|consen 175 PYE-DHYGPETFRTQWAAWVDV-----VDQFHS-FCDGRFCRLVLPQVKC-PTLIMHGGKDPFCGDP-----HVCFIPVL 241 (277)
T ss_pred hHH-HhcCHHHHHHHHHHHHHH-----HHHHhh-cCCCchHhhhcccccC-CeeEeeCCcCCCCCCC-----Cccchhhh
Confidence 000 00000 011111222211 111111 1112235678899999 9999999999999877 45555666
Q ss_pred cCCCeEEEecCCCccc-CccHHHHHHHHHHHHHh
Q 018555 311 MGGAEKVEIEHGIHSL-SNRVKEAVQAIIDFVKR 343 (354)
Q Consensus 311 ~~~~~~~~i~~agH~~-~~~p~~~~~~i~~Fl~~ 343 (354)
.+.+++.+.++++|.+ +..+++|++.+.+||++
T Consensus 242 ~~~a~~~~~peGkHn~hLrya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 242 KSLAKVEIHPEGKHNFHLRYAKEFNKLVLDFLKS 275 (277)
T ss_pred cccceEEEccCCCcceeeechHHHHHHHHHHHhc
Confidence 7889999999999999 89999999999999985
No 57
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.78 E-value=2.6e-17 Score=155.92 Aligned_cols=249 Identities=15% Similarity=0.143 Sum_probs=145.9
Q ss_pred eeEEEec-----CCCCcEEEEECCCCCCCCc----------cccHHHHHH---HHhhCCcEEEEEcccccC---------
Q 018555 84 VQVAFKT-----GDYQQQVIFIGGLTDGFFA----------TEYLEPLAI---ALDKERWSLVQFLMTSSY--------- 136 (354)
Q Consensus 84 ~~~~~~~-----~~~~p~vIliHG~~~~~~~----------~~~~~~la~---~La~~g~~Via~D~R~~~--------- 136 (354)
+.+.|.. ..+.++||++|++++.... ..||+.++- .|.-..|.||++|.-++.
T Consensus 41 ~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~ 120 (389)
T PRK06765 41 VQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVIT 120 (389)
T ss_pred ceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCC
Confidence 5566653 1346899999999842111 245877754 355568999999994321
Q ss_pred -------CCCCCC---Ccc-CcHHHHHHHHHHHHhhCCCCcEE-EEEEChhHHHHHHHHHh-cccccccccEEEEecccC
Q 018555 137 -------TGYGTS---SLQ-QDAMEIDQLISYLINKDNSEGVV-LLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVS 203 (354)
Q Consensus 137 -------~G~G~S---~~~-~~~~dl~~~i~~l~~~~~~~~~~-LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~ 203 (354)
++.|.+ +++ -...|+.+.+..+.++++++++. |+||||||++++++|.+ |+ +|+++|+++...
T Consensus 121 tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~----~v~~lv~ia~~~ 196 (389)
T PRK06765 121 TGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPH----MVERMIGVIGNP 196 (389)
T ss_pred CCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChH----hhheEEEEecCC
Confidence 111211 122 24677777777777788999986 99999999999999999 99 999999987543
Q ss_pred chHh---hhcchhHH---------------------HHHHHHHH----------HHhcCCCCCCCCCCCCC----CCcch
Q 018555 204 DREY---RATLPETA---------------------AMIDLASS----------MIREGRGSELMPREADP----CSPIT 245 (354)
Q Consensus 204 ~~~~---~~~~~~~~---------------------~~~~~~~~----------~~~~~~~~~~~~~~~~~----~~~~~ 245 (354)
.... ........ .-+..++. .+.+..... ......+ .....
T Consensus 197 ~~~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~-~~~~~~~~~~~~~~~~ 275 (389)
T PRK06765 197 QNDAWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRN-ASIEVDPYEKVSTLTS 275 (389)
T ss_pred CCChhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcC-ccccccccccccchhh
Confidence 2111 00000000 00011111 111111000 0000000 00011
Q ss_pred HHHHhhhhc----cc-CCCccc-------cCCC--ChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHc
Q 018555 246 AQRYHSLCA----YM-GDDDMF-------SSDL--SDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAM 311 (354)
Q Consensus 246 ~~~~~~~~~----~~-~~~~~~-------~~~l--~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~ 311 (354)
...|+.... .. ...+++ ..++ ...++.+.+.++++ |+|+|+|++|.++|+. ..+.+.+.+
T Consensus 276 ~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~-PtLvI~G~~D~l~p~~-----~~~~la~~l 349 (389)
T PRK06765 276 FEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEA-NVLMIPCKQDLLQPPR-----YNYKMVDIL 349 (389)
T ss_pred HHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCC-CEEEEEeCCCCCCCHH-----HHHHHHHHh
Confidence 112211110 00 000000 0011 01135678889999 9999999999999987 555566666
Q ss_pred C----CCeEEEecC-CCccc-CccHHHHHHHHHHHHHh
Q 018555 312 G----GAEKVEIEH-GIHSL-SNRVKEAVQAIIDFVKR 343 (354)
Q Consensus 312 ~----~~~~~~i~~-agH~~-~~~p~~~~~~i~~Fl~~ 343 (354)
+ ++++++|++ +||.. .++|++|++.|.+||++
T Consensus 350 p~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 350 QKQGKYAEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred hhcCCCeEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 4 688999996 99999 89999999999999975
No 58
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.77 E-value=8.6e-18 Score=158.16 Aligned_cols=103 Identities=12% Similarity=0.097 Sum_probs=80.7
Q ss_pred CcEEEEECCCCCCCCc--cccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcH-----HHHHHHHHHHHhhCCCCc
Q 018555 94 QQQVIFIGGLTDGFFA--TEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDA-----MEIDQLISYLINKDNSEG 166 (354)
Q Consensus 94 ~p~vIliHG~~~~~~~--~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~-----~dl~~~i~~l~~~~~~~~ 166 (354)
+++||++||+...... ..-+..+++.|.++||+|+++|+ .|+|.+...... +++.++++++.+..+.++
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~----~g~g~s~~~~~~~d~~~~~~~~~v~~l~~~~~~~~ 137 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDW----GYPDRADRYLTLDDYINGYIDKCVDYICRTSKLDQ 137 (350)
T ss_pred CCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeC----CCCCHHHhcCCHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 5679999997622111 11136899999999999999999 577776543332 347788899988888899
Q ss_pred EEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCc
Q 018555 167 VVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSD 204 (354)
Q Consensus 167 ~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~ 204 (354)
++|+||||||.+++.++.. ++ +|+++|++++..+
T Consensus 138 i~lvGhS~GG~i~~~~~~~~~~----~v~~lv~~~~p~~ 172 (350)
T TIGR01836 138 ISLLGICQGGTFSLCYAALYPD----KIKNLVTMVTPVD 172 (350)
T ss_pred ccEEEECHHHHHHHHHHHhCch----heeeEEEeccccc
Confidence 9999999999999999888 77 8999999987654
No 59
>PLN02872 triacylglycerol lipase
Probab=99.77 E-value=9.2e-18 Score=158.97 Aligned_cols=240 Identities=16% Similarity=0.196 Sum_probs=137.1
Q ss_pred CCcEEEEECCCCCCCCccccH------HHHHHHHhhCCcEEEEEcccccCCCCCCCCcc------------Cc-HHHHHH
Q 018555 93 YQQQVIFIGGLTDGFFATEYL------EPLAIALDKERWSLVQFLMTSSYTGYGTSSLQ------------QD-AMEIDQ 153 (354)
Q Consensus 93 ~~p~vIliHG~~~~~~~~~~~------~~la~~La~~g~~Via~D~R~~~~G~G~S~~~------------~~-~~dl~~ 153 (354)
.+|+|||+||++ .+...| ..++..|+++||+|+++|+|+...++|..... +. .+|+.+
T Consensus 73 ~~~~Vll~HGl~---~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a 149 (395)
T PLN02872 73 RGPPVLLQHGLF---MAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAE 149 (395)
T ss_pred CCCeEEEeCccc---ccccceeecCcccchHHHHHhCCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHH
Confidence 368999999998 444444 35677888899999999997543333332211 11 369999
Q ss_pred HHHHHHhhCCCCcEEEEEEChhHHHHHHHHHhcccccccccEEEEecccCchHhhhc-----ch--hHHHH---------
Q 018555 154 LISYLINKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDREYRAT-----LP--ETAAM--------- 217 (354)
Q Consensus 154 ~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~p~~~~~~v~~lIl~~p~~~~~~~~~-----~~--~~~~~--------- 217 (354)
+++++.+.. .+++++|||||||.+++.++.+|+ -..+|+.+++++|......... .. ....+
T Consensus 150 ~id~i~~~~-~~~v~~VGhS~Gg~~~~~~~~~p~-~~~~v~~~~~l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 227 (395)
T PLN02872 150 MIHYVYSIT-NSKIFIVGHSQGTIMSLAALTQPN-VVEMVEAAALLCPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQL 227 (395)
T ss_pred HHHHHHhcc-CCceEEEEECHHHHHHHHHhhChH-HHHHHHHHHHhcchhhhccCCCHHHHHHHHHhHHHHHHHhcCcee
Confidence 999987543 379999999999999986664443 2236888888888653211000 00 00000
Q ss_pred ------HH-HHHHH----------H--hcCCCCCC----CCCCCC----CCCcchHHHHhhhhcccCCCccccCCCC-hH
Q 018555 218 ------ID-LASSM----------I--REGRGSEL----MPREAD----PCSPITAQRYHSLCAYMGDDDMFSSDLS-DD 269 (354)
Q Consensus 218 ------~~-~~~~~----------~--~~~~~~~~----~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~ 269 (354)
+. ....+ + ..+....+ ++.... .........|..+..... ...| +.. ..
T Consensus 228 ~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~~~~~~pagtS~k~~~H~~Q~~~s~~-f~~y--Dyg~~~ 304 (395)
T PLN02872 228 NFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDYYLEYEPHPSSVKNLRHLFQMIRKGT-FAHY--DYGIFK 304 (395)
T ss_pred cCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhHHHhcCCCcchHHHHHHHHHHHhcCC-cccC--CCCchh
Confidence 00 00000 0 00000000 000000 000011122222211111 0000 000 00
Q ss_pred HH---------HHHhcCC--CCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCC-CeEEEecCCCccc----CccHHHH
Q 018555 270 QL---------KQRLGHM--ANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGG-AEKVEIEHGIHSL----SNRVKEA 333 (354)
Q Consensus 270 ~~---------~~~l~~i--~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~-~~~~~i~~agH~~----~~~p~~~ 333 (354)
.. .-.+.++ ++ |+++++|++|.++++. ..+.+.+.+++ .+++.+++++|.. .+.|+++
T Consensus 305 n~~~Yg~~~pP~Y~l~~i~~~~-Pv~i~~G~~D~lv~~~-----dv~~l~~~Lp~~~~l~~l~~~gH~dfi~~~eape~V 378 (395)
T PLN02872 305 NLKLYGQVNPPAFDLSLIPKSL-PLWMGYGGTDGLADVT-----DVEHTLAELPSKPELLYLENYGHIDFLLSTSAKEDV 378 (395)
T ss_pred hHHHhCCCCCCCcCcccCCCCc-cEEEEEcCCCCCCCHH-----HHHHHHHHCCCccEEEEcCCCCCHHHHhCcchHHHH
Confidence 11 0134566 56 9999999999999876 56677777776 6788899999963 4789999
Q ss_pred HHHHHHHHHhhCC
Q 018555 334 VQAIIDFVKREGP 346 (354)
Q Consensus 334 ~~~i~~Fl~~~~~ 346 (354)
.+.|++|+++...
T Consensus 379 ~~~Il~fL~~~~~ 391 (395)
T PLN02872 379 YNHMIQFFRSLGK 391 (395)
T ss_pred HHHHHHHHHHhhh
Confidence 9999999987543
No 60
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.77 E-value=2e-17 Score=143.04 Aligned_cols=198 Identities=18% Similarity=0.218 Sum_probs=143.4
Q ss_pred eeEEEecCCC-CcEEEEECCCCCCCCccccHHHHHHHHhh-CCcEEEEEcccccCCCCCCCCcc----CcHHHHHHHHHH
Q 018555 84 VQVAFKTGDY-QQQVIFIGGLTDGFFATEYLEPLAIALDK-ERWSLVQFLMTSSYTGYGTSSLQ----QDAMEIDQLISY 157 (354)
Q Consensus 84 ~~~~~~~~~~-~p~vIliHG~~~~~~~~~~~~~la~~La~-~g~~Via~D~R~~~~G~G~S~~~----~~~~dl~~~i~~ 157 (354)
..+++..... .++||+.||.. .+......+...|.. -+++|+.+|+ .|+|.|+-. ...+|+.++.++
T Consensus 49 ~~~y~~~~~~~~~~lly~hGNa---~Dlgq~~~~~~~l~~~ln~nv~~~DY----SGyG~S~G~psE~n~y~Di~avye~ 121 (258)
T KOG1552|consen 49 VCMYVRPPEAAHPTLLYSHGNA---ADLGQMVELFKELSIFLNCNVVSYDY----SGYGRSSGKPSERNLYADIKAVYEW 121 (258)
T ss_pred EEEEEcCccccceEEEEcCCcc---cchHHHHHHHHHHhhcccceEEEEec----ccccccCCCcccccchhhHHHHHHH
Confidence 4455555444 59999999985 333332333334432 3899999999 688887632 457899999999
Q ss_pred HHhhCC-CCcEEEEEEChhHHHHHHHHHhcccccccccEEEEecccCchHhhhcchhHHHHHHHHHHHHhcCCCCCCCCC
Q 018555 158 LINKDN-SEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLASSMIREGRGSELMPR 236 (354)
Q Consensus 158 l~~~~~-~~~~~LvGhS~GG~~a~~~a~~p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (354)
|++.+| .++++|+|+|+|....+.+|.+. .+.+|||.+|..+...... .... .
T Consensus 122 Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~-----~~~alVL~SPf~S~~rv~~----------------~~~~-----~ 175 (258)
T KOG1552|consen 122 LRNRYGSPERIILYGQSIGTVPTVDLASRY-----PLAAVVLHSPFTSGMRVAF----------------PDTK-----T 175 (258)
T ss_pred HHhhcCCCceEEEEEecCCchhhhhHhhcC-----CcceEEEeccchhhhhhhc----------------cCcc-----e
Confidence 999885 88999999999999999999872 2899999999776532111 0000 0
Q ss_pred CCCCCCcchHHHHhhhhcccCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCC-e
Q 018555 237 EADPCSPITAQRYHSLCAYMGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGGA-E 315 (354)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~-~ 315 (354)
. .. .+.|.. .+.+..++| |+|++||++|+++|.. ..+.+-+..+++ +
T Consensus 176 ---------~---------~~-~d~f~~-------i~kI~~i~~-PVLiiHgtdDevv~~s-----Hg~~Lye~~k~~~e 223 (258)
T KOG1552|consen 176 ---------T---------YC-FDAFPN-------IEKISKITC-PVLIIHGTDDEVVDFS-----HGKALYERCKEKVE 223 (258)
T ss_pred ---------E---------Ee-eccccc-------cCcceeccC-CEEEEecccCceeccc-----ccHHHHHhccccCC
Confidence 0 00 001111 156778999 9999999999999988 666666666554 6
Q ss_pred EEEecCCCcccCccHHHHHHHHHHHHHhhCC
Q 018555 316 KVEIEHGIHSLSNRVKEAVQAIIDFVKREGP 346 (354)
Q Consensus 316 ~~~i~~agH~~~~~p~~~~~~i~~Fl~~~~~ 346 (354)
-.+++|+||.-.+...++.+.+..|+..+..
T Consensus 224 pl~v~g~gH~~~~~~~~yi~~l~~f~~~~~~ 254 (258)
T KOG1552|consen 224 PLWVKGAGHNDIELYPEYIEHLRRFISSVLP 254 (258)
T ss_pred CcEEecCCCcccccCHHHHHHHHHHHHHhcc
Confidence 7889999999998899999999999987764
No 61
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.75 E-value=8.9e-17 Score=134.25 Aligned_cols=216 Identities=19% Similarity=0.221 Sum_probs=142.5
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCc-------cCcHHHHHHHHHHHHhhCCC
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSL-------QQDAMEIDQLISYLINKDNS 164 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~-------~~~~~dl~~~i~~l~~~~~~ 164 (354)
+....+||+||+-.. -+..+...+|..|++.||.++.+|+ .|-|.|.- ...++|+..+++++.. ...
T Consensus 31 gs~e~vvlcHGfrS~-Kn~~~~~~vA~~~e~~gis~fRfDF----~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~-~nr 104 (269)
T KOG4667|consen 31 GSTEIVVLCHGFRSH-KNAIIMKNVAKALEKEGISAFRFDF----SGNGESEGSFYYGNYNTEADDLHSVIQYFSN-SNR 104 (269)
T ss_pred CCceEEEEeeccccc-cchHHHHHHHHHHHhcCceEEEEEe----cCCCCcCCccccCcccchHHHHHHHHHHhcc-Cce
Confidence 567899999999844 3555678899999999999999999 68887752 2357999999999975 223
Q ss_pred CcEEEEEEChhHHHHHHHHHhcccccccccEEEEecccCchHhhhcchhHHHHHHHH-HHHHhcCCCCCCCCCCCCC---
Q 018555 165 EGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLA-SSMIREGRGSELMPREADP--- 240 (354)
Q Consensus 165 ~~~~LvGhS~GG~~a~~~a~~p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--- 240 (354)
--.+++|||-||.+++.|+.+-. .+.-+|.++...+....-.. .+-..+ .....+|..+ .-++.-..
T Consensus 105 ~v~vi~gHSkGg~Vvl~ya~K~~----d~~~viNcsGRydl~~~I~e----Rlg~~~l~~ike~Gfid-~~~rkG~y~~r 175 (269)
T KOG4667|consen 105 VVPVILGHSKGGDVVLLYASKYH----DIRNVINCSGRYDLKNGINE----RLGEDYLERIKEQGFID-VGPRKGKYGYR 175 (269)
T ss_pred EEEEEEeecCccHHHHHHHHhhc----CchheEEcccccchhcchhh----hhcccHHHHHHhCCcee-cCcccCCcCce
Confidence 34589999999999999999832 47777776654443221100 010111 1112222211 11100000
Q ss_pred CCcchHHHHhhhhcccCCCccccCCCChHHHHHHh-cCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCCeEEEe
Q 018555 241 CSPITAQRYHSLCAYMGDDDMFSSDLSDDQLKQRL-GHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGGAEKVEI 319 (354)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l-~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~i 319 (354)
..+......+ ..++ ..+.+ -..+| |+|-+||..|.+||.+ .++++++.+|+.++.+|
T Consensus 176 vt~eSlmdrL------------ntd~----h~aclkId~~C-~VLTvhGs~D~IVPve-----~AkefAk~i~nH~L~iI 233 (269)
T KOG4667|consen 176 VTEESLMDRL------------NTDI----HEACLKIDKQC-RVLTVHGSEDEIVPVE-----DAKEFAKIIPNHKLEII 233 (269)
T ss_pred ecHHHHHHHH------------hchh----hhhhcCcCccC-ceEEEeccCCceeech-----hHHHHHHhccCCceEEe
Confidence 1111111110 1111 11111 24579 9999999999999998 78899999999999999
Q ss_pred cCCCcccCccHHHHHHHHHHHHHhh
Q 018555 320 EHGIHSLSNRVKEAVQAIIDFVKRE 344 (354)
Q Consensus 320 ~~agH~~~~~p~~~~~~i~~Fl~~~ 344 (354)
|||+|....+..+++...+.|.+-.
T Consensus 234 EgADHnyt~~q~~l~~lgl~f~k~r 258 (269)
T KOG4667|consen 234 EGADHNYTGHQSQLVSLGLEFIKTR 258 (269)
T ss_pred cCCCcCccchhhhHhhhcceeEEee
Confidence 9999999877888888888887643
No 62
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.74 E-value=1.5e-18 Score=152.32 Aligned_cols=199 Identities=19% Similarity=0.200 Sum_probs=122.3
Q ss_pred cEEEEEcccccCCCCCCCCc---c----CcHHHHHHHHHHHHhhCCCCcEEEEEEChhHHHHHHHHHh-cccccccccEE
Q 018555 125 WSLVQFLMTSSYTGYGTSSL---Q----QDAMEIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAA 196 (354)
Q Consensus 125 ~~Via~D~R~~~~G~G~S~~---~----~~~~dl~~~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~l 196 (354)
|+|+++|+ +|+|.|+. . -..+|+.+.++.+.+.++.++++++||||||.+++.|+.+ |+ +|+++
T Consensus 1 f~vi~~d~----rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~----~v~~l 72 (230)
T PF00561_consen 1 FDVILFDL----RGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPE----RVKKL 72 (230)
T ss_dssp EEEEEEEC----TTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGG----GEEEE
T ss_pred CEEEEEeC----CCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCch----hhcCc
Confidence 78999999 69999984 1 1367888889999888899999999999999999999999 88 99999
Q ss_pred EEecccC---chHhhhcch--hHHH---------HHHHHHHHHhcCCC-CCCCCCCCCCCCcchHHHHhhhhc---ccCC
Q 018555 197 IFQAPVS---DREYRATLP--ETAA---------MIDLASSMIREGRG-SELMPREADPCSPITAQRYHSLCA---YMGD 258 (354)
Q Consensus 197 Il~~p~~---~~~~~~~~~--~~~~---------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 258 (354)
|++++.. ......... .... .............. ......... .............. ....
T Consensus 73 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 151 (230)
T PF00561_consen 73 VLISPPPDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFV-EDFLKQFQSQQYARFAETDAF 151 (230)
T ss_dssp EEESESSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTHHHHHHHHHHHHTCHHHHH
T ss_pred EEEeeeccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccc-cchhhccchhhhhHHHHHHHH
Confidence 9999851 100000000 0000 00000000000000 000000000 00000000000000 0000
Q ss_pred Ccccc---CCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCCeEEEecCCCccc-CccHHHHH
Q 018555 259 DDMFS---SDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGGAEKVEIEHGIHSL-SNRVKEAV 334 (354)
Q Consensus 259 ~~~~~---~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~-~~~p~~~~ 334 (354)
...+. ...........+..+++ |+|+++|++|.++|.. ....+.+.+|+.++++++++||.. .++|+++.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~l~~i~~-p~l~i~~~~D~~~p~~-----~~~~~~~~~~~~~~~~~~~~GH~~~~~~~~~~~ 225 (230)
T PF00561_consen 152 DNMFWNALGYFSVWDPSPALSNIKV-PTLIIWGEDDPLVPPE-----SSEQLAKLIPNSQLVLIEGSGHFAFLEGPDEFN 225 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTTS-EEEEEEETTCSSSHHH-----HHHHHHHHSTTEEEEEETTCCSTHHHHSHHHHH
T ss_pred hhhccccccccccccccccccccCC-CeEEEEeCCCCCCCHH-----HHHHHHHhcCCCEEEECCCCChHHHhcCHHhhh
Confidence 00000 00112233456788999 9999999999999988 677788999999999999999999 89999999
Q ss_pred HHHH
Q 018555 335 QAII 338 (354)
Q Consensus 335 ~~i~ 338 (354)
+.|.
T Consensus 226 ~~i~ 229 (230)
T PF00561_consen 226 EIII 229 (230)
T ss_dssp HHHH
T ss_pred hhhc
Confidence 8875
No 63
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.74 E-value=3.8e-17 Score=142.96 Aligned_cols=192 Identities=20% Similarity=0.183 Sum_probs=124.3
Q ss_pred HHHHHHHhhCCcEEEEEcccccCCCCCCCC--------ccCcHHHHHHHHHHHHhh--CCCCcEEEEEEChhHHHHHHHH
Q 018555 114 EPLAIALDKERWSLVQFLMTSSYTGYGTSS--------LQQDAMEIDQLISYLINK--DNSEGVVLLGHSTGCQDIVHYM 183 (354)
Q Consensus 114 ~~la~~La~~g~~Via~D~R~~~~G~G~S~--------~~~~~~dl~~~i~~l~~~--~~~~~~~LvGhS~GG~~a~~~a 183 (354)
......|+++||.|+.+|+|++ .|+|..- .....+|+.++++++.++ .+.+++.|+|||+||.+++.++
T Consensus 4 ~~~~~~la~~Gy~v~~~~~rGs-~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 4 NWNAQLLASQGYAVLVPNYRGS-GGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp SHHHHHHHTTT-EEEEEE-TTS-SSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eHHHHHHHhCCEEEEEEcCCCC-CccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh
Confidence 4567889889999999999854 2444321 123478899999999875 4568999999999999999999
Q ss_pred Hh-cccccccccEEEEecccCchHhhhcchhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcchHHHHhhhhcccCCCccc
Q 018555 184 RA-NAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLASSMIREGRGSELMPREADPCSPITAQRYHSLCAYMGDDDMF 262 (354)
Q Consensus 184 ~~-p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (354)
.+ |+ +++++|..+|+.+.......... .... .....+.. . ..+.....+..
T Consensus 83 ~~~~~----~f~a~v~~~g~~d~~~~~~~~~~---~~~~-~~~~~~~~-----~----~~~~~~~~~s~----------- 134 (213)
T PF00326_consen 83 TQHPD----RFKAAVAGAGVSDLFSYYGTTDI---YTKA-EYLEYGDP-----W----DNPEFYRELSP----------- 134 (213)
T ss_dssp HHTCC----GSSEEEEESE-SSTTCSBHHTCC---HHHG-HHHHHSST-----T----TSHHHHHHHHH-----------
T ss_pred cccce----eeeeeeccceecchhcccccccc---cccc-cccccCcc-----c----hhhhhhhhhcc-----------
Confidence 96 88 99999999998765432211100 0000 01110000 0 00000001110
Q ss_pred cCCCChHHHHHHhcC--CCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCCeEEEecCCCcccC--ccHHHHHHHHH
Q 018555 263 SSDLSDDQLKQRLGH--MANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGGAEKVEIEHGIHSLS--NRVKEAVQAII 338 (354)
Q Consensus 263 ~~~l~~~~~~~~l~~--i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~--~~p~~~~~~i~ 338 (354)
...+.+ ++. |+|++||++|..||.. ....+.+.+.+...+.++++++++||.+. +...+..+.+.
T Consensus 135 ---------~~~~~~~~~~~-P~li~hG~~D~~Vp~~-~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~ 203 (213)
T PF00326_consen 135 ---------ISPADNVQIKP-PVLIIHGENDPRVPPS-QSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERIL 203 (213)
T ss_dssp ---------GGGGGGCGGGS-EEEEEEETTBSSSTTH-HHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHH
T ss_pred ---------ccccccccCCC-CEEEEccCCCCccCHH-HHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHH
Confidence 022233 677 9999999999999887 44556777777666689999999999773 44567889999
Q ss_pred HHHHhhC
Q 018555 339 DFVKREG 345 (354)
Q Consensus 339 ~Fl~~~~ 345 (354)
+|+++.-
T Consensus 204 ~f~~~~l 210 (213)
T PF00326_consen 204 DFFDKYL 210 (213)
T ss_dssp HHHHHHT
T ss_pred HHHHHHc
Confidence 9998754
No 64
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.73 E-value=5.1e-16 Score=137.00 Aligned_cols=230 Identities=20% Similarity=0.194 Sum_probs=130.8
Q ss_pred CcEEEEECCCCCCCCccccHHHHHHHHhhC--CcEEEEEcccccCCCCCCCCccC--cHHHHHHHHHHHHhhCCCCcEEE
Q 018555 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKE--RWSLVQFLMTSSYTGYGTSSLQQ--DAMEIDQLISYLINKDNSEGVVL 169 (354)
Q Consensus 94 ~p~vIliHG~~~~~~~~~~~~~la~~La~~--g~~Via~D~R~~~~G~G~S~~~~--~~~dl~~~i~~l~~~~~~~~~~L 169 (354)
.++|||+||++ .+...|......+... .|+|+.+|+ +|||.|. .. ......+.+..+.+.++..+++|
T Consensus 21 ~~~i~~~hg~~---~~~~~~~~~~~~~~~~~~~~~~~~~d~----~g~g~s~-~~~~~~~~~~~~~~~~~~~~~~~~~~l 92 (282)
T COG0596 21 GPPLVLLHGFP---GSSSVWRPVFKVLPALAARYRVIAPDL----RGHGRSD-PAGYSLSAYADDLAALLDALGLEKVVL 92 (282)
T ss_pred CCeEEEeCCCC---CchhhhHHHHHHhhccccceEEEEecc----cCCCCCC-cccccHHHHHHHHHHHHHHhCCCceEE
Confidence 56999999999 6666676633333321 199999999 7999986 11 12222444444444566778999
Q ss_pred EEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhh----------cchhHHHH-----HHHHHHHHhcCC-CCC
Q 018555 170 LGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRA----------TLPETAAM-----IDLASSMIREGR-GSE 232 (354)
Q Consensus 170 vGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~----------~~~~~~~~-----~~~~~~~~~~~~-~~~ 232 (354)
+||||||.+++.++.+ |+ +++++|++++........ ........ ............ ...
T Consensus 93 ~G~S~Gg~~~~~~~~~~p~----~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (282)
T COG0596 93 VGHSMGGAVALALALRHPD----RVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAAFAALLAALGLLAA 168 (282)
T ss_pred EEecccHHHHHHHHHhcch----hhheeeEecCCCCcccccCccccCccccchhhhhhhhhccchhhhhhhhhccccccc
Confidence 9999999999999998 88 999999998754311000 00000000 000000111000 000
Q ss_pred CCC------CCCCC-CCcchHHHHhhhhcccCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHH
Q 018555 233 LMP------READP-CSPITAQRYHSLCAYMGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVE 305 (354)
Q Consensus 233 ~~~------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~ 305 (354)
+.. ..... ..................... ............+..+.+ |+++|+|++|.+.|.. ...
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-P~l~i~g~~d~~~~~~-----~~~ 241 (282)
T COG0596 169 LAAAARAGLAEALRAPLLGAAAAAFARAARADLAAA-LLALLDRDLRAALARITV-PTLIIHGEDDPVVPAE-----LAR 241 (282)
T ss_pred ccccchhccccccccccchhHhhhhhhhcccccchh-hhcccccccchhhccCCC-CeEEEecCCCCcCCHH-----HHH
Confidence 000 00000 000000000000000000000 000111123356778889 9999999999666654 345
Q ss_pred HHHHHcCC-CeEEEecCCCccc-CccHHHHHHHHHHHHH
Q 018555 306 RLCRAMGG-AEKVEIEHGIHSL-SNRVKEAVQAIIDFVK 342 (354)
Q Consensus 306 ~~~~~~~~-~~~~~i~~agH~~-~~~p~~~~~~i~~Fl~ 342 (354)
.+.+..++ .++++++++||.. .++|+.+++.+.+|++
T Consensus 242 ~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 242 RLAAALPNDARLVVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred HHHhhCCCCceEEEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 66666775 8999999999999 8899999999888554
No 65
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.70 E-value=6.6e-16 Score=150.48 Aligned_cols=219 Identities=12% Similarity=0.061 Sum_probs=129.0
Q ss_pred CCcEEEEECCCCCCCCccccHH-----HHHHHHhhCCcEEEEEcccccCCCCCCCCcc----CcH-HHHHHHHHHHHhhC
Q 018555 93 YQQQVIFIGGLTDGFFATEYLE-----PLAIALDKERWSLVQFLMTSSYTGYGTSSLQ----QDA-MEIDQLISYLINKD 162 (354)
Q Consensus 93 ~~p~vIliHG~~~~~~~~~~~~-----~la~~La~~g~~Via~D~R~~~~G~G~S~~~----~~~-~dl~~~i~~l~~~~ 162 (354)
.+++||++||+. .....|+ .+++.|.++||+|+++|+ .|+|.+... +.+ +++.++++.+.+..
T Consensus 187 ~~~PlLiVp~~i---~k~yilDL~p~~Slv~~L~~qGf~V~~iDw----rgpg~s~~~~~~ddY~~~~i~~al~~v~~~~ 259 (532)
T TIGR01838 187 HKTPLLIVPPWI---NKYYILDLRPQNSLVRWLVEQGHTVFVISW----RNPDASQADKTFDDYIRDGVIAALEVVEAIT 259 (532)
T ss_pred CCCcEEEECccc---ccceeeecccchHHHHHHHHCCcEEEEEEC----CCCCcccccCChhhhHHHHHHHHHHHHHHhc
Confidence 568999999988 4444453 799999989999999999 577876543 222 45778888888888
Q ss_pred CCCcEEEEEEChhHHHHHH----HHHh--cccccccccEEEEecccCchHhhhcchhH--HHHHHHHHHHHhc-C-----
Q 018555 163 NSEGVVLLGHSTGCQDIVH----YMRA--NAACSRAVRAAIFQAPVSDREYRATLPET--AAMIDLASSMIRE-G----- 228 (354)
Q Consensus 163 ~~~~~~LvGhS~GG~~a~~----~a~~--p~~~~~~v~~lIl~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~-~----- 228 (354)
+.++++++||||||.++.. +++. ++ +|+++|++++..+.........+ ...+...++.+.. +
T Consensus 260 g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~----rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G~lpg~ 335 (532)
T TIGR01838 260 GEKQVNCVGYCIGGTLLSTALAYLAARGDDK----RIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGGYLDGR 335 (532)
T ss_pred CCCCeEEEEECcCcHHHHHHHHHHHHhCCCC----ccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcCCCCHH
Confidence 8899999999999998622 3333 44 79999998875543211110000 0000011111100 0
Q ss_pred ---------CCC---------------CCCCCC--CC--C--CCcc-hHHHHhhhhcccCCCccccCCCChHHHHHHhcC
Q 018555 229 ---------RGS---------------ELMPRE--AD--P--CSPI-TAQRYHSLCAYMGDDDMFSSDLSDDQLKQRLGH 277 (354)
Q Consensus 229 ---------~~~---------------~~~~~~--~~--~--~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~ 277 (354)
+.. ...+.. +. . ..+. ....++..+... ..+-...+........+.+
T Consensus 336 ~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~--N~L~~G~~~v~g~~~dL~~ 413 (532)
T TIGR01838 336 QMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQ--NALTTGGLEVCGVRLDLSK 413 (532)
T ss_pred HHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhc--CCCcCCeeEECCEecchhh
Confidence 000 000000 00 0 0000 001111000000 0000011111112246778
Q ss_pred CCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCCeEEEecCCCccc-CccH
Q 018555 278 MANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGGAEKVEIEHGIHSL-SNRV 330 (354)
Q Consensus 278 i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~-~~~p 330 (354)
|++ |+|+|+|++|.++|.. ..+.+.+.+++.+.++++++||.. .++|
T Consensus 414 I~v-PvLvV~G~~D~IvP~~-----sa~~l~~~i~~~~~~vL~~sGHi~~ienP 461 (532)
T TIGR01838 414 VKV-PVYIIATREDHIAPWQ-----SAYRGAALLGGPKTFVLGESGHIAGVVNP 461 (532)
T ss_pred CCC-CEEEEeeCCCCcCCHH-----HHHHHHHHCCCCEEEEECCCCCchHhhCC
Confidence 999 9999999999999988 677778888998999999999998 5544
No 66
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.70 E-value=5.3e-16 Score=155.98 Aligned_cols=211 Identities=18% Similarity=0.191 Sum_probs=139.1
Q ss_pred cEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCC--------ccCcHHHHHHHHHHHHhh--CCC
Q 018555 95 QQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSS--------LQQDAMEIDQLISYLINK--DNS 164 (354)
Q Consensus 95 p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~--------~~~~~~dl~~~i~~l~~~--~~~ 164 (354)
|+||++||-+..... ..+....+.|+.+||.|+.+++|++ .|+|+.- ...+.+|+.+.++++.+. .+.
T Consensus 395 P~i~~~hGGP~~~~~-~~~~~~~q~~~~~G~~V~~~n~RGS-~GyG~~F~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~ 472 (620)
T COG1506 395 PLIVYIHGGPSAQVG-YSFNPEIQVLASAGYAVLAPNYRGS-TGYGREFADAIRGDWGGVDLEDLIAAVDALVKLPLVDP 472 (620)
T ss_pred CEEEEeCCCCccccc-cccchhhHHHhcCCeEEEEeCCCCC-CccHHHHHHhhhhccCCccHHHHHHHHHHHHhCCCcCh
Confidence 899999998744333 3356677888889999999999977 4776542 224678999999977652 445
Q ss_pred CcEEEEEEChhHHHHHHHHHhcccccccccEEEEecccCchHhhhcchhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcc
Q 018555 165 EGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLASSMIREGRGSELMPREADPCSPI 244 (354)
Q Consensus 165 ~~~~LvGhS~GG~~a~~~a~~p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (354)
+++.++|||+||++++..+...+ .+++.|.+.+..+......... ... +. .+.........
T Consensus 473 ~ri~i~G~SyGGymtl~~~~~~~----~f~a~~~~~~~~~~~~~~~~~~-~~~----~~----------~~~~~~~~~~~ 533 (620)
T COG1506 473 ERIGITGGSYGGYMTLLAATKTP----RFKAAVAVAGGVDWLLYFGEST-EGL----RF----------DPEENGGGPPE 533 (620)
T ss_pred HHeEEeccChHHHHHHHHHhcCc----hhheEEeccCcchhhhhccccc-hhh----cC----------CHHHhCCCccc
Confidence 69999999999999999998733 5666666655444321111000 000 00 00000000000
Q ss_pred hHHHHhhhhcccCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCCeEEEecCCCc
Q 018555 245 TAQRYHSLCAYMGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGGAEKVEIEHGIH 324 (354)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~i~~agH 324 (354)
....+.. .. -.....++++ |+|+|||++|..||.+ +...+.+.++....+.+++++|+.+|
T Consensus 534 ~~~~~~~----------------~s-p~~~~~~i~~-P~LliHG~~D~~v~~~-q~~~~~~aL~~~g~~~~~~~~p~e~H 594 (620)
T COG1506 534 DREKYED----------------RS-PIFYADNIKT-PLLLIHGEEDDRVPIE-QAEQLVDALKRKGKPVELVVFPDEGH 594 (620)
T ss_pred ChHHHHh----------------cC-hhhhhcccCC-CEEEEeecCCccCChH-HHHHHHHHHHHcCceEEEEEeCCCCc
Confidence 0000000 00 1145678999 9999999999999987 45567777777666789999999999
Q ss_pred cc-C-ccHHHHHHHHHHHHHhhC
Q 018555 325 SL-S-NRVKEAVQAIIDFVKREG 345 (354)
Q Consensus 325 ~~-~-~~p~~~~~~i~~Fl~~~~ 345 (354)
.+ . ++...+.+.+++|+++..
T Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~ 617 (620)
T COG1506 595 GFSRPENRVKVLKEILDWFKRHL 617 (620)
T ss_pred CCCCchhHHHHHHHHHHHHHHHh
Confidence 99 3 556678899999998753
No 67
>PRK11460 putative hydrolase; Provisional
Probab=99.69 E-value=7.8e-16 Score=136.35 Aligned_cols=174 Identities=14% Similarity=0.115 Sum_probs=108.4
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccC-CCC--CC-----C--CccCcH-------HHHHHH
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSY-TGY--GT-----S--SLQQDA-------MEIDQL 154 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~-~G~--G~-----S--~~~~~~-------~dl~~~ 154 (354)
...++|||+||+| .+...|..+++.|.+.++.+..+++++.. .+. |. . +.+... +.+.+.
T Consensus 14 ~~~~~vIlLHG~G---~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~ 90 (232)
T PRK11460 14 PAQQLLLLFHGVG---DNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIET 90 (232)
T ss_pred CCCcEEEEEeCCC---CChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHH
Confidence 4578999999999 77788999999998766555555553210 011 11 0 111111 223344
Q ss_pred HHHHHhhCC--CCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhhcchhHHHHHHHHHHHHhcCCCC
Q 018555 155 ISYLINKDN--SEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLASSMIREGRGS 231 (354)
Q Consensus 155 i~~l~~~~~--~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (354)
++++.++++ .++++|+|||+||.+++.++.+ ++ .+.++|.+++....
T Consensus 91 i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~----~~~~vv~~sg~~~~-------------------------- 140 (232)
T PRK11460 91 VRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPG----LAGRVIAFSGRYAS-------------------------- 140 (232)
T ss_pred HHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCC----cceEEEEecccccc--------------------------
Confidence 455544443 4689999999999999999887 66 67777765431100
Q ss_pred CCCCCCCCCCCcchHHHHhhhhcccCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHc
Q 018555 232 ELMPREADPCSPITAQRYHSLCAYMGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAM 311 (354)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~ 311 (354)
.+. ...... |++++||++|++||.+ ...+..+.+++..
T Consensus 141 --~~~--------------------------------------~~~~~~-pvli~hG~~D~vvp~~-~~~~~~~~L~~~g 178 (232)
T PRK11460 141 --LPE--------------------------------------TAPTAT-TIHLIHGGEDPVIDVA-HAVAAQEALISLG 178 (232)
T ss_pred --ccc--------------------------------------cccCCC-cEEEEecCCCCccCHH-HHHHHHHHHHHCC
Confidence 000 001235 9999999999999987 2334455555544
Q ss_pred CCCeEEEecCCCcccCccHHHHHHHHHHHHHh
Q 018555 312 GGAEKVEIEHGIHSLSNRVKEAVQAIIDFVKR 343 (354)
Q Consensus 312 ~~~~~~~i~~agH~~~~~p~~~~~~i~~Fl~~ 343 (354)
.+.+++++++++|.+. .+..+.+.+||++
T Consensus 179 ~~~~~~~~~~~gH~i~---~~~~~~~~~~l~~ 207 (232)
T PRK11460 179 GDVTLDIVEDLGHAID---PRLMQFALDRLRY 207 (232)
T ss_pred CCeEEEEECCCCCCCC---HHHHHHHHHHHHH
Confidence 4577888999999993 2334444445543
No 68
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.69 E-value=2.4e-15 Score=139.11 Aligned_cols=261 Identities=14% Similarity=0.173 Sum_probs=164.5
Q ss_pred CcceeeeEeeCC-CCeeEEEecC---------CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCC
Q 018555 70 NQFRGVLFKYGP-KPVQVAFKTG---------DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGY 139 (354)
Q Consensus 70 ~~~~~~~~~~~~-~~~~~~~~~~---------~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~ 139 (354)
.++...+.++.+ +.+++.|... +..|.||++||+.++. ...|-+.++..+.++||+|+.++. +|+
T Consensus 91 ~~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S-~~~YVr~lv~~a~~~G~r~VVfN~----RG~ 165 (409)
T KOG1838|consen 91 VEYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGS-HESYVRHLVHEAQRKGYRVVVFNH----RGL 165 (409)
T ss_pred CcceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCC-hhHHHHHHHHHHHhCCcEEEEECC----CCC
Confidence 345666666644 4466777532 3459999999999764 557889999999999999999999 588
Q ss_pred CCCCcc-------CcHHHHHHHHHHHHhhCCCCcEEEEEEChhHHHHHHHHHhcccccccccEEEEecccCch---Hhhh
Q 018555 140 GTSSLQ-------QDAMEIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDR---EYRA 209 (354)
Q Consensus 140 G~S~~~-------~~~~dl~~~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~p~~~~~~v~~lIl~~p~~~~---~~~~ 209 (354)
|.+... .+.+|+.++++++++++...+++.+|.||||++...|..+-....+.+.++++.+|+... ....
T Consensus 166 ~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~ 245 (409)
T KOG1838|consen 166 GGSKLTTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIE 245 (409)
T ss_pred CCCccCCCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHh
Confidence 877543 357999999999999999999999999999999999998822233567788888886632 1111
Q ss_pred cc--hh-HHHHHH-HHHHHHhcCCCCCCCCCCCCC---CCcchHHHHhhhhccc-----CCCccccCCCChHHHHHHhcC
Q 018555 210 TL--PE-TAAMID-LASSMIREGRGSELMPREADP---CSPITAQRYHSLCAYM-----GDDDMFSSDLSDDQLKQRLGH 277 (354)
Q Consensus 210 ~~--~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~~~~~l~~ 277 (354)
.. .. ...++. ...+++...+. .+....... ....+.+.|.+..... ..++||. .......+.+
T Consensus 246 ~~~~~~~y~~~l~~~l~~~~~~~r~-~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~----~aSs~~~v~~ 320 (409)
T KOG1838|consen 246 TPLYRRFYNRALTLNLKRIVLRHRH-TLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYK----KASSSNYVDK 320 (409)
T ss_pred cccchHHHHHHHHHhHHHHHhhhhh-hhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHh----hcchhhhccc
Confidence 10 00 011111 11111111100 000000000 1112334443322111 1111211 1223367889
Q ss_pred CCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCCeEEEecCCCccc-Ccc----H-HHHHHHHHHHHHhhC
Q 018555 278 MANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGGAEKVEIEHGIHSL-SNR----V-KEAVQAIIDFVKREG 345 (354)
Q Consensus 278 i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~-~~~----p-~~~~~~i~~Fl~~~~ 345 (354)
|++ |+|+|.+.+|+++|+.. +-....+..|+.-+++-.-+||.- ++. + .++.+.+.+|+....
T Consensus 321 I~V-P~L~ina~DDPv~p~~~----ip~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~~ 389 (409)
T KOG1838|consen 321 IKV-PLLCINAADDPVVPEEA----IPIDDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNAI 389 (409)
T ss_pred ccc-cEEEEecCCCCCCCccc----CCHHHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHHH
Confidence 999 99999999999999862 333444567888888899999998 443 2 345555888887654
No 69
>PLN00021 chlorophyllase
Probab=99.69 E-value=2e-15 Score=138.96 Aligned_cols=106 Identities=15% Similarity=0.196 Sum_probs=81.4
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhh----------
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINK---------- 161 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~---------- 161 (354)
+..|+|||+||++ .....|..+++.|+++||.|+++|+ .|++........++..++++++.+.
T Consensus 50 g~~PvVv~lHG~~---~~~~~y~~l~~~Las~G~~VvapD~----~g~~~~~~~~~i~d~~~~~~~l~~~l~~~l~~~~~ 122 (313)
T PLN00021 50 GTYPVLLFLHGYL---LYNSFYSQLLQHIASHGFIVVAPQL----YTLAGPDGTDEIKDAAAVINWLSSGLAAVLPEGVR 122 (313)
T ss_pred CCCCEEEEECCCC---CCcccHHHHHHHHHhCCCEEEEecC----CCcCCCCchhhHHHHHHHHHHHHhhhhhhcccccc
Confidence 4569999999999 6777899999999999999999999 4554433344456667777777642
Q ss_pred CCCCcEEEEEEChhHHHHHHHHHh-ccc-ccccccEEEEecccCc
Q 018555 162 DNSEGVVLLGHSTGCQDIVHYMRA-NAA-CSRAVRAAIFQAPVSD 204 (354)
Q Consensus 162 ~~~~~~~LvGhS~GG~~a~~~a~~-p~~-~~~~v~~lIl~~p~~~ 204 (354)
.+.++++|+||||||.+++.++.+ ++. ...+++++|+++|+..
T Consensus 123 ~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g 167 (313)
T PLN00021 123 PDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDG 167 (313)
T ss_pred cChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccc
Confidence 344789999999999999999987 431 1136899999888654
No 70
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.68 E-value=1.5e-15 Score=160.77 Aligned_cols=237 Identities=14% Similarity=0.084 Sum_probs=132.0
Q ss_pred CCcEEEEECCCCCCCCccccHHHH-----HHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHh--hCCCC
Q 018555 93 YQQQVIFIGGLTDGFFATEYLEPL-----AIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLIN--KDNSE 165 (354)
Q Consensus 93 ~~p~vIliHG~~~~~~~~~~~~~l-----a~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~--~~~~~ 165 (354)
.+++|||+||++ .+...|+.+ ++.|.++||+|+++|++......+.. .....+++..+++.+.. +...+
T Consensus 66 ~~~plllvhg~~---~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~G~~~~~~~~~-~~~l~~~i~~l~~~l~~v~~~~~~ 141 (994)
T PRK07868 66 VGPPVLMVHPMM---MSADMWDVTRDDGAVGILHRAGLDPWVIDFGSPDKVEGGM-ERNLADHVVALSEAIDTVKDVTGR 141 (994)
T ss_pred CCCcEEEECCCC---CCccceecCCcccHHHHHHHCCCEEEEEcCCCCChhHcCc-cCCHHHHHHHHHHHHHHHHHhhCC
Confidence 568999999999 666678754 78898889999999973111000000 01122333334444321 23346
Q ss_pred cEEEEEEChhHHHHHHHHHh--cccccccccEEEEecccCchHhh---hc---------------------chhH-----
Q 018555 166 GVVLLGHSTGCQDIVHYMRA--NAACSRAVRAAIFQAPVSDREYR---AT---------------------LPET----- 214 (354)
Q Consensus 166 ~~~LvGhS~GG~~a~~~a~~--p~~~~~~v~~lIl~~p~~~~~~~---~~---------------------~~~~----- 214 (354)
+++|+||||||.+++.+++. ++ +|+++|++++..+.... .. .+..
T Consensus 142 ~v~lvG~s~GG~~a~~~aa~~~~~----~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 217 (994)
T PRK07868 142 DVHLVGYSQGGMFCYQAAAYRRSK----DIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTG 217 (994)
T ss_pred ceEEEEEChhHHHHHHHHHhcCCC----ccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHH
Confidence 89999999999999999874 55 89999987654321100 00 0000
Q ss_pred HHH------HHHHHHHHhcCCCCCC-CCCCCCC-------CCcc---hHHHHhhhhcccCCCccccCCCChHHHHHHhcC
Q 018555 215 AAM------IDLASSMIREGRGSEL-MPREADP-------CSPI---TAQRYHSLCAYMGDDDMFSSDLSDDQLKQRLGH 277 (354)
Q Consensus 215 ~~~------~~~~~~~~~~~~~~~~-~~~~~~~-------~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~ 277 (354)
..+ ......+...-..... .+..... .... ....+...... ........+....-...+.+
T Consensus 218 ~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~--~n~~~~g~~~~~~~~~~L~~ 295 (994)
T PRK07868 218 FQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIA--HNRMMTGGFAINGQMVTLAD 295 (994)
T ss_pred HHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHH--hCcccCceEEECCEEcchhh
Confidence 000 0001111111110000 0000000 0000 00001110000 00000000000000124789
Q ss_pred CCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCCeE-EEecCCCccc-C---ccHHHHHHHHHHHHHhhC
Q 018555 278 MANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGGAEK-VEIEHGIHSL-S---NRVKEAVQAIIDFVKREG 345 (354)
Q Consensus 278 i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~-~~i~~agH~~-~---~~p~~~~~~i~~Fl~~~~ 345 (354)
|++ |+|+|+|++|.++|+. ..+.+.+.++++++ ++++++||+. + .-++++...|.+||++..
T Consensus 296 i~~-P~L~i~G~~D~ivp~~-----~~~~l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~ 362 (994)
T PRK07868 296 ITC-PVLAFVGEVDDIGQPA-----SVRGIRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLE 362 (994)
T ss_pred CCC-CEEEEEeCCCCCCCHH-----HHHHHHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhc
Confidence 999 9999999999999988 77888888999987 6889999997 2 357889999999998754
No 71
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.68 E-value=7e-15 Score=131.49 Aligned_cols=246 Identities=17% Similarity=0.220 Sum_probs=144.4
Q ss_pred CCeeEEEec---CCCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCC-------ccCcHHHH
Q 018555 82 KPVQVAFKT---GDYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSS-------LQQDAMEI 151 (354)
Q Consensus 82 ~~~~~~~~~---~~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~-------~~~~~~dl 151 (354)
+-+.+.|.. ....|.||++||+.++. ...|-+.|++.+.++||.|+.+|. +||+.+- .....+|+
T Consensus 60 ~~~~ldw~~~p~~~~~P~vVl~HGL~G~s-~s~y~r~L~~~~~~rg~~~Vv~~~----Rgcs~~~n~~p~~yh~G~t~D~ 134 (345)
T COG0429 60 GFIDLDWSEDPRAAKKPLVVLFHGLEGSS-NSPYARGLMRALSRRGWLVVVFHF----RGCSGEANTSPRLYHSGETEDI 134 (345)
T ss_pred CEEEEeeccCccccCCceEEEEeccCCCC-cCHHHHHHHHHHHhcCCeEEEEec----ccccCCcccCcceecccchhHH
Confidence 344555553 24568999999999765 566889999999999999999999 5887653 22346899
Q ss_pred HHHHHHHHhhCCCCcEEEEEEChhHHHHHHHHHhcccccccccEEEEecccCchHhhhc-----ch-h-HHH-HHHHHHH
Q 018555 152 DQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDREYRAT-----LP-E-TAA-MIDLASS 223 (354)
Q Consensus 152 ~~~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~p~~~~~~v~~lIl~~p~~~~~~~~~-----~~-~-~~~-~~~~~~~ 223 (354)
..+++++++.....++..||.|+||.+...|..+. .....+.+.+.++...+.+.-.. +. . ... +.....+
T Consensus 135 ~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgee-g~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~l~~~L~~ 213 (345)
T COG0429 135 RFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEE-GDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSRYLLRNLKR 213 (345)
T ss_pred HHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhh-ccCcccceeeeeeCHHHHHHHHHHhcCchhhhhhHHHHHHHHHH
Confidence 99999999888889999999999996555555541 11224555554443332221100 00 0 000 1111111
Q ss_pred HHhcCCCCCCCCCCCCCCCcchHHHHhhhhcccCCCccccCC-C---ChHHH------HHHhcCCCCCcEEEEeeCCCCC
Q 018555 224 MIREGRGSELMPREADPCSPITAQRYHSLCAYMGDDDMFSSD-L---SDDQL------KQRLGHMANTPCQVIFSMADEY 293 (354)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l---~~~~~------~~~l~~i~~~PvLvi~G~~D~~ 293 (354)
.+..+.. ++.+. .........++...+.. .++.+... + ..++. ...+++|.+ |+|+|++.+|++
T Consensus 214 ~~~~kl~-~l~~~-~p~~~~~~ik~~~ti~e---FD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~-PtLii~A~DDP~ 287 (345)
T COG0429 214 NAARKLK-ELEPS-LPGTVLAAIKRCRTIRE---FDDLLTAPLHGFADAEDYYRQASSLPLLPKIRK-PTLIINAKDDPF 287 (345)
T ss_pred HHHHHHH-hcCcc-cCcHHHHHHHhhchHHh---ccceeeecccCCCcHHHHHHhcccccccccccc-ceEEEecCCCCC
Confidence 1111100 11000 00010111221111110 01111100 0 11111 136789999 999999999999
Q ss_pred CCchhcHHHHHHHHHH-HcCCCeEEEecCCCccc-Cc----cHH-HHHHHHHHHHHhh
Q 018555 294 VPEYVDKKALVERLCR-AMGGAEKVEIEHGIHSL-SN----RVK-EAVQAIIDFVKRE 344 (354)
Q Consensus 294 vp~~~~~~~~~~~~~~-~~~~~~~~~i~~agH~~-~~----~p~-~~~~~i~~Fl~~~ 344 (354)
+++.. ..+... ..|+..+.+-+.+||.- .. ++. +..+.|.+||+..
T Consensus 288 ~~~~~-----iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~ 340 (345)
T COG0429 288 MPPEV-----IPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPF 340 (345)
T ss_pred CChhh-----CCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHH
Confidence 98862 222222 56888999999999997 43 444 7788999999764
No 72
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.67 E-value=2.2e-14 Score=128.74 Aligned_cols=103 Identities=17% Similarity=0.212 Sum_probs=83.5
Q ss_pred CcEEEEECCCCCCCC-ccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCcc-------CcHHHHHHHHHHHHhhCCCC
Q 018555 94 QQQVIFIGGLTDGFF-ATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQ-------QDAMEIDQLISYLINKDNSE 165 (354)
Q Consensus 94 ~p~vIliHG~~~~~~-~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~-------~~~~dl~~~i~~l~~~~~~~ 165 (354)
+++|||+||++.... ....|..+++.|+++||+|+++|+ +|||.|..+ ...+|+.++++++.+. +..
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl----~G~G~S~g~~~~~~~~~~~~Dv~~ai~~L~~~-~~~ 99 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDL----YGCGDSAGDFAAARWDVWKEDVAAAYRWLIEQ-GHP 99 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECC----CCCCCCCCccccCCHHHHHHHHHHHHHHHHhc-CCC
Confidence 578999999984221 234588899999989999999999 799988532 1246777888888753 578
Q ss_pred cEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCch
Q 018555 166 GVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDR 205 (354)
Q Consensus 166 ~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~ 205 (354)
+++|+||||||.+++.++.+ |+ .++++|+++|+..-
T Consensus 100 ~v~LvG~SmGG~vAl~~A~~~p~----~v~~lVL~~P~~~g 136 (266)
T TIGR03101 100 PVTLWGLRLGALLALDAANPLAA----KCNRLVLWQPVVSG 136 (266)
T ss_pred CEEEEEECHHHHHHHHHHHhCcc----ccceEEEeccccch
Confidence 99999999999999999988 77 89999999997653
No 73
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.67 E-value=3.1e-15 Score=129.83 Aligned_cols=221 Identities=17% Similarity=0.204 Sum_probs=132.3
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhh-CCcEEEEEcccccCCCCCCCCccC--------cHHHHHHHHHHHHhhC
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDK-ERWSLVQFLMTSSYTGYGTSSLQQ--------DAMEIDQLISYLINKD 162 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~-~g~~Via~D~R~~~~G~G~S~~~~--------~~~dl~~~i~~l~~~~ 162 (354)
..+|.++|+||.| .+.-.|..++..|.. ..++|+++|+ +|||.+..++ ...|+.++++++-.+.
T Consensus 72 t~gpil~l~HG~G---~S~LSfA~~a~el~s~~~~r~~a~Dl----RgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~ 144 (343)
T KOG2564|consen 72 TEGPILLLLHGGG---SSALSFAIFASELKSKIRCRCLALDL----RGHGETKVENEDDLSLETMSKDFGAVIKELFGEL 144 (343)
T ss_pred CCccEEEEeecCc---ccchhHHHHHHHHHhhcceeEEEeec----cccCccccCChhhcCHHHHHHHHHHHHHHHhccC
Confidence 4789999999999 777779999988864 5789999999 6999986443 3567777777775433
Q ss_pred CCCcEEEEEEChhHHHHHHHHHhcccccccccEEEEecccCchH--hhhc-------chhHHHHHHHHHHHH-hcCCC--
Q 018555 163 NSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDRE--YRAT-------LPETAAMIDLASSMI-REGRG-- 230 (354)
Q Consensus 163 ~~~~~~LvGhS~GG~~a~~~a~~p~~~~~~v~~lIl~~p~~~~~--~~~~-------~~~~~~~~~~~~~~~-~~~~~-- 230 (354)
..+++||||||||.+|++.|.. ...+.+.||++++-+-... .... .|...+.+..+-++- ..+..
T Consensus 145 -~~~iilVGHSmGGaIav~~a~~--k~lpsl~Gl~viDVVEgtAmeAL~~m~~fL~~rP~~F~Si~~Ai~W~v~sg~~Rn 221 (343)
T KOG2564|consen 145 -PPQIILVGHSMGGAIAVHTAAS--KTLPSLAGLVVIDVVEGTAMEALNSMQHFLRNRPKSFKSIEDAIEWHVRSGQLRN 221 (343)
T ss_pred -CCceEEEeccccchhhhhhhhh--hhchhhhceEEEEEechHHHHHHHHHHHHHhcCCccccchhhHHHHHhccccccc
Confidence 4689999999999999988875 2222688999887654322 1110 111111111111111 11100
Q ss_pred --C--CCCCCCCCCCCcchHHHHhhhhcccCCCccccCCCCh---------HHHHHHhcCCCCCcEEEEeeCCCCCCCch
Q 018555 231 --S--ELMPREADPCSPITAQRYHSLCAYMGDDDMFSSDLSD---------DQLKQRLGHMANTPCQVIFSMADEYVPEY 297 (354)
Q Consensus 231 --~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---------~~~~~~l~~i~~~PvLvi~G~~D~~vp~~ 297 (354)
. --+|....+.. .+-.-.|..++.. ..+...+=...+ |-|+|.+..|..-- +
T Consensus 222 ~~SArVsmP~~~~~~~-------------eGh~yvwrtdL~kte~YW~gWF~gLS~~Fl~~p~-~klLilAg~d~LDk-d 286 (343)
T KOG2564|consen 222 RDSARVSMPSQLKQCE-------------EGHCYVWRTDLEKTEQYWKGWFKGLSDKFLGLPV-PKLLILAGVDRLDK-D 286 (343)
T ss_pred cccceEecchheeecc-------------CCCcEEEEeeccccchhHHHHHhhhhhHhhCCCc-cceeEEecccccCc-c
Confidence 0 00111110000 0000001111110 111233445677 98999998886421 1
Q ss_pred hcHHHHHHHHHHHcCCCeEEEecCCCccc-CccHHHHHHHHHHHHHhh
Q 018555 298 VDKKALVERLCRAMGGAEKVEIEHGIHSL-SNRVKEAVQAIIDFVKRE 344 (354)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~i~~agH~~-~~~p~~~~~~i~~Fl~~~ 344 (354)
+ .+-+.-...++.+++.+||++ .+.|..++..+..|+.+.
T Consensus 287 -----L--tiGQMQGk~Q~~vL~~~GH~v~ED~P~kva~~~~~f~~Rn 327 (343)
T KOG2564|consen 287 -----L--TIGQMQGKFQLQVLPLCGHFVHEDSPHKVAECLCVFWIRN 327 (343)
T ss_pred -----e--eeeeeccceeeeeecccCceeccCCcchHHHHHHHHHhhh
Confidence 1 111222446889999999999 678999999999999864
No 74
>PLN02442 S-formylglutathione hydrolase
Probab=99.66 E-value=6.7e-15 Score=134.31 Aligned_cols=187 Identities=14% Similarity=0.105 Sum_probs=116.7
Q ss_pred CCCcEEEEECCCCCCCCccccH---HHHHHHHhhCCcEEEEEcccccCCCCC---------------CC-----Ccc---
Q 018555 92 DYQQQVIFIGGLTDGFFATEYL---EPLAIALDKERWSLVQFLMTSSYTGYG---------------TS-----SLQ--- 145 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~---~~la~~La~~g~~Via~D~R~~~~G~G---------------~S-----~~~--- 145 (354)
.+.|+|+|+||++ ++...| ..+.+.++..||.|+.+|.. ++| .+ ..+
T Consensus 45 ~~~Pvv~~lHG~~---~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (283)
T PLN02442 45 GKVPVLYWLSGLT---CTDENFIQKSGAQRAAAARGIALVAPDTS----PRGLNVEGEADSWDFGVGAGFYLNATQEKWK 117 (283)
T ss_pred CCCCEEEEecCCC---cChHHHHHhhhHHHHHhhcCeEEEecCCC----CCCCCCCCCccccccCCCcceeeccccCCCc
Confidence 4579999999988 444334 33456777789999999973 222 11 100
Q ss_pred --C----cHHHHHHHHHHHHhhCCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhhcchhHHHHH
Q 018555 146 --Q----DAMEIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRATLPETAAMI 218 (354)
Q Consensus 146 --~----~~~dl~~~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~ 218 (354)
. ..+++..+++...+.++.++++|+||||||..|+.++.+ |+ .+++++.++|..++...... ...
T Consensus 118 ~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~----~~~~~~~~~~~~~~~~~~~~---~~~- 189 (283)
T PLN02442 118 NWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPD----KYKSVSAFAPIANPINCPWG---QKA- 189 (283)
T ss_pred ccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCch----hEEEEEEECCccCcccCchh---hHH-
Confidence 1 123444444444334577899999999999999999998 88 99999999987653211000 000
Q ss_pred HHHHHHHhcCCCCCCCCCCCCCCCcchHHHHhhhhcccCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchh
Q 018555 219 DLASSMIREGRGSELMPREADPCSPITAQRYHSLCAYMGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYV 298 (354)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~ 298 (354)
...++.. ......++ ........+...+. |+++++|++|.+++...
T Consensus 190 --~~~~~g~--------------~~~~~~~~-----------------d~~~~~~~~~~~~~-pvli~~G~~D~~v~~~~ 235 (283)
T PLN02442 190 --FTNYLGS--------------DKADWEEY-----------------DATELVSKFNDVSA-TILIDQGEADKFLKEQL 235 (283)
T ss_pred --HHHHcCC--------------ChhhHHHc-----------------ChhhhhhhccccCC-CEEEEECCCCccccccc
Confidence 1111100 00000000 00011134456777 99999999999988643
Q ss_pred cHHHHHHHHHHHcCCCeEEEecCCCcccC
Q 018555 299 DKKALVERLCRAMGGAEKVEIEHGIHSLS 327 (354)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~i~~agH~~~ 327 (354)
....+.+.+++...+.+++++++.+|...
T Consensus 236 ~s~~~~~~l~~~g~~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 236 LPENFEEACKEAGAPVTLRLQPGYDHSYF 264 (283)
T ss_pred cHHHHHHHHHHcCCCeEEEEeCCCCccHH
Confidence 33446677776666688999999999875
No 75
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.63 E-value=8.6e-15 Score=122.53 Aligned_cols=202 Identities=18% Similarity=0.253 Sum_probs=142.0
Q ss_pred EecCCCCcEEEEECCCCCCCCccccHHHHHHHH-hhCCcEEEEEcccccCCCCCCCCcc----CcHHHHHHHHHHHHhh-
Q 018555 88 FKTGDYQQQVIFIGGLTDGFFATEYLEPLAIAL-DKERWSLVQFLMTSSYTGYGTSSLQ----QDAMEIDQLISYLINK- 161 (354)
Q Consensus 88 ~~~~~~~p~vIliHG~~~~~~~~~~~~~la~~L-a~~g~~Via~D~R~~~~G~G~S~~~----~~~~dl~~~i~~l~~~- 161 (354)
...+.+.|+|+++|+.. ++..+.-+++..+ ...+.+|+.+++ +|+|.|+-. ...-|-+.++++|..+
T Consensus 72 ~~~E~S~pTlLyfh~NA---GNmGhr~~i~~~fy~~l~mnv~ivsY----RGYG~S~GspsE~GL~lDs~avldyl~t~~ 144 (300)
T KOG4391|consen 72 MLSESSRPTLLYFHANA---GNMGHRLPIARVFYVNLKMNVLIVSY----RGYGKSEGSPSEEGLKLDSEAVLDYLMTRP 144 (300)
T ss_pred ecccCCCceEEEEccCC---CcccchhhHHHHHHHHcCceEEEEEe----eccccCCCCccccceeccHHHHHHHHhcCc
Confidence 34567899999999988 5555555555543 446899999999 599988633 2356888999999874
Q ss_pred -CCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhhcchhHHHHHHHHHHHHhcCCCCCCCCCCCC
Q 018555 162 -DNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLASSMIREGRGSELMPREAD 239 (354)
Q Consensus 162 -~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (354)
++..+++|.|.|+||.+|+.+|++ .+ ++.++|+.+.......+.-. . +
T Consensus 145 ~~dktkivlfGrSlGGAvai~lask~~~----ri~~~ivENTF~SIp~~~i~-~-----------v-------------- 194 (300)
T KOG4391|consen 145 DLDKTKIVLFGRSLGGAVAIHLASKNSD----RISAIIVENTFLSIPHMAIP-L-----------V-------------- 194 (300)
T ss_pred cCCcceEEEEecccCCeeEEEeeccchh----heeeeeeechhccchhhhhh-e-----------e--------------
Confidence 556789999999999999999998 66 99999998876654221100 0 0
Q ss_pred CCCcchHHHHhhhhcccCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCC--CeEE
Q 018555 240 PCSPITAQRYHSLCAYMGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGG--AEKV 317 (354)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~--~~~~ 317 (354)
.+...+.+..++.. ..|.+ ...+++-+. |.|+|.|.+|++||+. +.+.+-..+|. .++.
T Consensus 195 --~p~~~k~i~~lc~k----n~~~S-------~~ki~~~~~-P~LFiSGlkDelVPP~-----~Mr~Ly~~c~S~~Krl~ 255 (300)
T KOG4391|consen 195 --FPFPMKYIPLLCYK----NKWLS-------YRKIGQCRM-PFLFISGLKDELVPPV-----MMRQLYELCPSRTKRLA 255 (300)
T ss_pred --ccchhhHHHHHHHH----hhhcc-------hhhhccccC-ceEEeecCccccCCcH-----HHHHHHHhCchhhhhhe
Confidence 00000000000000 00110 134555567 9999999999999998 77788787765 5788
Q ss_pred EecCCCcccCccHHHHHHHHHHHHHhhC
Q 018555 318 EIEHGIHSLSNRVKEAVQAIIDFVKREG 345 (354)
Q Consensus 318 ~i~~agH~~~~~p~~~~~~i~~Fl~~~~ 345 (354)
.+|++.|...-.-|-..++|.+||.+..
T Consensus 256 eFP~gtHNDT~i~dGYfq~i~dFlaE~~ 283 (300)
T KOG4391|consen 256 EFPDGTHNDTWICDGYFQAIEDFLAEVV 283 (300)
T ss_pred eCCCCccCceEEeccHHHHHHHHHHHhc
Confidence 9999999995455678899999998764
No 76
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.62 E-value=2.5e-14 Score=125.62 Aligned_cols=176 Identities=20% Similarity=0.213 Sum_probs=113.9
Q ss_pred CCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCC--CCCcc---------------CcHHHHHHHH
Q 018555 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYG--TSSLQ---------------QDAMEIDQLI 155 (354)
Q Consensus 93 ~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G--~S~~~---------------~~~~dl~~~i 155 (354)
+.|.||++|++. +-....+.+++.|+++||.|+++|+- .|.+ ..+.. ....++.+.+
T Consensus 13 ~~~~Vvv~~d~~---G~~~~~~~~ad~lA~~Gy~v~~pD~f---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~ 86 (218)
T PF01738_consen 13 PRPAVVVIHDIF---GLNPNIRDLADRLAEEGYVVLAPDLF---GGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAV 86 (218)
T ss_dssp SEEEEEEE-BTT---BS-HHHHHHHHHHHHTT-EEEEE-CC---CCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCC---CCchHHHHHHHHHHhcCCCEEecccc---cCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 579999999977 44466788999999999999999983 3444 11111 1135666778
Q ss_pred HHHHhhC--CCCcEEEEEEChhHHHHHHHHHhcccccccccEEEEecccCchHhhhcchhHHHHHHHHHHHHhcCCCCCC
Q 018555 156 SYLINKD--NSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLASSMIREGRGSEL 233 (354)
Q Consensus 156 ~~l~~~~--~~~~~~LvGhS~GG~~a~~~a~~p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (354)
++|+++. +.+++.++|+||||.+++.++.+.. .++++|..-|.....
T Consensus 87 ~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~~----~~~a~v~~yg~~~~~--------------------------- 135 (218)
T PF01738_consen 87 DYLRAQPEVDPGKIGVVGFCWGGKLALLLAARDP----RVDAAVSFYGGSPPP--------------------------- 135 (218)
T ss_dssp HHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCTT----TSSEEEEES-SSSGG---------------------------
T ss_pred HHHHhccccCCCcEEEEEEecchHHhhhhhhhcc----ccceEEEEcCCCCCC---------------------------
Confidence 8887743 4579999999999999999987744 788888755400000
Q ss_pred CCCCCCCCCcchHHHHhhhhcccCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCC
Q 018555 234 MPREADPCSPITAQRYHSLCAYMGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGG 313 (354)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~ 313 (354)
.......++++ |+|+++|++|+.+|.+ ..+.+.+.+.+....
T Consensus 136 ------------------------------------~~~~~~~~~~~-P~l~~~g~~D~~~~~~-~~~~~~~~l~~~~~~ 177 (218)
T PF01738_consen 136 ------------------------------------PPLEDAPKIKA-PVLILFGENDPFFPPE-EVEALEEALKAAGVD 177 (218)
T ss_dssp ------------------------------------GHHHHGGG--S--EEEEEETT-TTS-HH-HHHHHHHHHHCTTTT
T ss_pred ------------------------------------cchhhhcccCC-CEeecCccCCCCCChH-HHHHHHHHHHhcCCc
Confidence 00134456778 9999999999999877 233344455444566
Q ss_pred CeEEEecCCCcccC--cc----H---HHHHHHHHHHHHh
Q 018555 314 AEKVEIEHGIHSLS--NR----V---KEAVQAIIDFVKR 343 (354)
Q Consensus 314 ~~~~~i~~agH~~~--~~----p---~~~~~~i~~Fl~~ 343 (354)
.++++|+|++|.+. .. + ++..+.+.+||++
T Consensus 178 ~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~ 216 (218)
T PF01738_consen 178 VEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKR 216 (218)
T ss_dssp EEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC
T ss_pred EEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHh
Confidence 88999999999992 11 1 2456778888875
No 77
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.60 E-value=1.7e-13 Score=124.55 Aligned_cols=202 Identities=14% Similarity=0.045 Sum_probs=115.7
Q ss_pred CCCcEEEEECCCCCCCCccccHHH--HH-HHHhhCCcEEEEEcccccCCCCCCCC-------------------cc----
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEP--LA-IALDKERWSLVQFLMTSSYTGYGTSS-------------------LQ---- 145 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~--la-~~La~~g~~Via~D~R~~~~G~G~S~-------------------~~---- 145 (354)
.+.|+|||+||++ .+...|.. .+ ..+++.||.|++||... .|+|.+. .+
T Consensus 40 ~~~P~vvllHG~~---~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~--~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~ 114 (275)
T TIGR02821 40 GPVPVLWYLSGLT---CTHENFMIKAGAQRFAAEHGLALVAPDTSP--RGTGIAGEDDAWDFGKGAGFYVDATEEPWSQH 114 (275)
T ss_pred CCCCEEEEccCCC---CCccHHHhhhHHHHHHhhcCcEEEEeCCCC--CcCCCCCCcccccccCCccccccCCcCccccc
Confidence 3468999999999 55555542 23 33445699999999821 2332111 00
Q ss_pred -CcHHHH-HHHHHHHHhh--CCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhhcchhHHHHHHH
Q 018555 146 -QDAMEI-DQLISYLINK--DNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRATLPETAAMIDL 220 (354)
Q Consensus 146 -~~~~dl-~~~i~~l~~~--~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~ 220 (354)
.....+ .++...+.+. ++.++++|+||||||.+++.++.+ |+ .++++++++|..+...... .. ..
T Consensus 115 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~----~~~~~~~~~~~~~~~~~~~---~~---~~ 184 (275)
T TIGR02821 115 YRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPD----RFKSVSAFAPIVAPSRCPW---GQ---KA 184 (275)
T ss_pred chHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcc----cceEEEEECCccCcccCcc---hH---HH
Confidence 111222 2233333332 456789999999999999999998 88 9999999998865421100 00 00
Q ss_pred HHHHHhcCCCCCCCCCCCCCCCcchHHHHhhhhcccCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcH
Q 018555 221 ASSMIREGRGSELMPREADPCSPITAQRYHSLCAYMGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDK 300 (354)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~ 300 (354)
...++.. . +.. +.. .....+...+ .... |+++++|++|..+|.....
T Consensus 185 ~~~~l~~--~------------~~~---~~~--------------~~~~~~~~~~-~~~~-plli~~G~~D~~v~~~~~~ 231 (275)
T TIGR02821 185 FSAYLGA--D------------EAA---WRS--------------YDASLLVADG-GRHS-TILIDQGTADQFLDEQLRP 231 (275)
T ss_pred HHHHhcc--c------------ccc---hhh--------------cchHHHHhhc-ccCC-CeeEeecCCCcccCccccH
Confidence 1111100 0 000 000 0000010111 2456 9999999999999873233
Q ss_pred HHHHHHHHHHcCCCeEEEecCCCcccCccHHHHHHHHHHHHH
Q 018555 301 KALVERLCRAMGGAEKVEIEHGIHSLSNRVKEAVQAIIDFVK 342 (354)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~i~~agH~~~~~p~~~~~~i~~Fl~ 342 (354)
..+.+.+++..-..++.+++|++|....- ..+.+..++|..
T Consensus 232 ~~~~~~l~~~g~~v~~~~~~g~~H~f~~~-~~~~~~~~~~~~ 272 (275)
T TIGR02821 232 DAFEQACRAAGQALTLRRQAGYDHSYYFI-ASFIADHLRHHA 272 (275)
T ss_pred HHHHHHHHHcCCCeEEEEeCCCCccchhH-HHhHHHHHHHHH
Confidence 44666676665567889999999998322 233444444544
No 78
>PRK10162 acetyl esterase; Provisional
Probab=99.59 E-value=3.3e-13 Score=125.19 Aligned_cols=221 Identities=11% Similarity=0.071 Sum_probs=135.2
Q ss_pred CCCCcEEEEECCCCCCCCccccHHHHHHHHhh-CCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHh---hCC--C
Q 018555 91 GDYQQQVIFIGGLTDGFFATEYLEPLAIALDK-ERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLIN---KDN--S 164 (354)
Q Consensus 91 ~~~~p~vIliHG~~~~~~~~~~~~~la~~La~-~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~---~~~--~ 164 (354)
....|+||++||.+-..++...|..+++.|++ .|+.|+.+|+| .......+...+|+.++++++.+ +++ .
T Consensus 78 ~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYr----lape~~~p~~~~D~~~a~~~l~~~~~~~~~d~ 153 (318)
T PRK10162 78 PDSQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYT----LSPEARFPQAIEEIVAVCCYFHQHAEDYGINM 153 (318)
T ss_pred CCCCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCC----CCCCCCCCCcHHHHHHHHHHHHHhHHHhCCCh
Confidence 34468999999966433455667888888886 59999999996 44444567778899988888865 343 4
Q ss_pred CcEEEEEEChhHHHHHHHHHh-cccc--cccccEEEEecccCchHhhhcchhHHHHHHHHHHHHhcCCCCCCCCCCCCCC
Q 018555 165 EGVVLLGHSTGCQDIVHYMRA-NAAC--SRAVRAAIFQAPVSDREYRATLPETAAMIDLASSMIREGRGSELMPREADPC 241 (354)
Q Consensus 165 ~~~~LvGhS~GG~~a~~~a~~-p~~~--~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (354)
++++|+|+|+||.+++.++.. .+.. ...+.++|++.|..+.... +. ....... . ..+
T Consensus 154 ~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~---~s--------~~~~~~~-~-~~l------- 213 (318)
T PRK10162 154 SRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDS---VS--------RRLLGGV-W-DGL------- 213 (318)
T ss_pred hHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCC---hh--------HHHhCCC-c-ccc-------
Confidence 689999999999999999875 3221 1378999999887653110 00 0000000 0 000
Q ss_pred CcchHHHHhhhhccc--CCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCCeEEEe
Q 018555 242 SPITAQRYHSLCAYM--GDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGGAEKVEI 319 (354)
Q Consensus 242 ~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~i 319 (354)
.......+....... ...+.+...+ ...+..--. |++|++|+.|.+.+. ...+.+++.+..-..+++++
T Consensus 214 ~~~~~~~~~~~y~~~~~~~~~p~~~p~-----~~~l~~~lP-p~~i~~g~~D~L~de---~~~~~~~L~~aGv~v~~~~~ 284 (318)
T PRK10162 214 TQQDLQMYEEAYLSNDADRESPYYCLF-----NNDLTRDVP-PCFIAGAEFDPLLDD---SRLLYQTLAAHQQPCEFKLY 284 (318)
T ss_pred CHHHHHHHHHHhCCCccccCCcccCcc-----hhhhhcCCC-CeEEEecCCCcCcCh---HHHHHHHHHHcCCCEEEEEE
Confidence 000011111110000 0000000000 022311224 999999999998753 34577777777667899999
Q ss_pred cCCCccc--Cc----cHHHHHHHHHHHHHhh
Q 018555 320 EHGIHSL--SN----RVKEAVQAIIDFVKRE 344 (354)
Q Consensus 320 ~~agH~~--~~----~p~~~~~~i~~Fl~~~ 344 (354)
++..|.+ .. ...+..+.+.+||++.
T Consensus 285 ~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~ 315 (318)
T PRK10162 285 PGTLHAFLHYSRMMDTADDALRDGAQFFTAQ 315 (318)
T ss_pred CCCceehhhccCchHHHHHHHHHHHHHHHHH
Confidence 9999987 21 2346677788888754
No 79
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.56 E-value=3.1e-13 Score=118.49 Aligned_cols=184 Identities=18% Similarity=0.157 Sum_probs=103.6
Q ss_pred EEecCCCCcEEEEECCCCCCCCccccHHHHHH-HHhhCCcEEEEEcccccC--CCCCC----------CCcc--CcHH--
Q 018555 87 AFKTGDYQQQVIFIGGLTDGFFATEYLEPLAI-ALDKERWSLVQFLMTSSY--TGYGT----------SSLQ--QDAM-- 149 (354)
Q Consensus 87 ~~~~~~~~p~vIliHG~~~~~~~~~~~~~la~-~La~~g~~Via~D~R~~~--~G~G~----------S~~~--~~~~-- 149 (354)
.-..+...++|||+||+| .+...|..+.. .+.....+++.++-+... ...|. .+.+ .+.+
T Consensus 7 ~~~~~~~~~lvi~LHG~G---~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i 83 (216)
T PF02230_consen 7 IEPKGKAKPLVILLHGYG---DSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGI 83 (216)
T ss_dssp E--SST-SEEEEEE--TT---S-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHH
T ss_pred eCCCCCCceEEEEECCCC---CCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHH
Confidence 334457789999999999 55566666655 233357788877643100 01111 0111 1222
Q ss_pred -----HHHHHHHHHHh-hCCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhhcchhHHHHHHHHH
Q 018555 150 -----EIDQLISYLIN-KDNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLAS 222 (354)
Q Consensus 150 -----dl~~~i~~l~~-~~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~ 222 (354)
.+.++|+...+ ..+.++++|+|+|+||.+++.++.+ |. .+.++|.+++.......
T Consensus 84 ~~s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~----~~~gvv~lsG~~~~~~~-------------- 145 (216)
T PF02230_consen 84 EESAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPE----PLAGVVALSGYLPPESE-------------- 145 (216)
T ss_dssp HHHHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSS----TSSEEEEES---TTGCC--------------
T ss_pred HHHHHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCc----CcCEEEEeecccccccc--------------
Confidence 23344443332 2456789999999999999999998 88 99999998763321100
Q ss_pred HHHhcCCCCCCCCCCCCCCCcchHHHHhhhhcccCCCccccCCCChHHHHHHhcCC-CCCcEEEEeeCCCCCCCchhcHH
Q 018555 223 SMIREGRGSELMPREADPCSPITAQRYHSLCAYMGDDDMFSSDLSDDQLKQRLGHM-ANTPCQVIFSMADEYVPEYVDKK 301 (354)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~i-~~~PvLvi~G~~D~~vp~~~~~~ 301 (354)
.. ...... +. |++++||.+|+++|.. ..+
T Consensus 146 -----------~~-------------------------------------~~~~~~~~~-pi~~~hG~~D~vvp~~-~~~ 175 (216)
T PF02230_consen 146 -----------LE-------------------------------------DRPEALAKT-PILIIHGDEDPVVPFE-WAE 175 (216)
T ss_dssp -----------CH-------------------------------------CCHCCCCTS--EEEEEETT-SSSTHH-HHH
T ss_pred -----------cc-------------------------------------ccccccCCC-cEEEEecCCCCcccHH-HHH
Confidence 00 000001 34 9999999999999976 233
Q ss_pred HHHHHHHHHcCCCeEEEecCCCcccCccHHHHHHHHHHHHHhh
Q 018555 302 ALVERLCRAMGGAEKVEIEHGIHSLSNRVKEAVQAIIDFVKRE 344 (354)
Q Consensus 302 ~~~~~~~~~~~~~~~~~i~~agH~~~~~p~~~~~~i~~Fl~~~ 344 (354)
...+.+++...+.++..+++.||.+ ..+..+.+.+||++.
T Consensus 176 ~~~~~L~~~~~~v~~~~~~g~gH~i---~~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 176 KTAEFLKAAGANVEFHEYPGGGHEI---SPEELRDLREFLEKH 215 (216)
T ss_dssp HHHHHHHCTT-GEEEEEETT-SSS-----HHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEEcCCCCCCC---CHHHHHHHHHHHhhh
Confidence 3455555555567889999999999 345666788888763
No 80
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.55 E-value=2.1e-13 Score=119.14 Aligned_cols=100 Identities=17% Similarity=0.106 Sum_probs=73.7
Q ss_pred CCCcEEEEECCCCCCCCccccHH---HHHHHHhhCCcEEEEEcccccCCCCCCC-------------CccCcHHHHHHHH
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLE---PLAIALDKERWSLVQFLMTSSYTGYGTS-------------SLQQDAMEIDQLI 155 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~---~la~~La~~g~~Via~D~R~~~~G~G~S-------------~~~~~~~dl~~~i 155 (354)
+..|+||++||.+. +...+. .+...+.+.||.|+++|+| |++.+ .......++.+++
T Consensus 11 ~~~P~vv~lHG~~~---~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 83 (212)
T TIGR01840 11 GPRALVLALHGCGQ---TASAYVIDWGWKAAADRYGFVLVAPEQT----SYNSSNNCWDWFFTHHRARGTGEVESLHQLI 83 (212)
T ss_pred CCCCEEEEeCCCCC---CHHHHhhhcChHHHHHhCCeEEEecCCc----CccccCCCCCCCCccccCCCCccHHHHHHHH
Confidence 45799999999883 333232 2455555679999999995 43321 1123467888899
Q ss_pred HHHHhhCC--CCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEeccc
Q 018555 156 SYLINKDN--SEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPV 202 (354)
Q Consensus 156 ~~l~~~~~--~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~ 202 (354)
+++.++++ .++++|+||||||.+++.++.+ |+ .+.+++.+++.
T Consensus 84 ~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~----~~~~~~~~~g~ 129 (212)
T TIGR01840 84 DAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPD----VFAGGASNAGL 129 (212)
T ss_pred HHHHHhcCcChhheEEEEECHHHHHHHHHHHhCch----hheEEEeecCC
Confidence 99887654 4689999999999999999988 87 88888877654
No 81
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.55 E-value=1.6e-13 Score=118.12 Aligned_cols=221 Identities=14% Similarity=0.111 Sum_probs=137.1
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhhCC----CCcE
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDN----SEGV 167 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~~~----~~~~ 167 (354)
+.+..|+++|--| ++..+|+.+...|.. .+.++++++ +|.|.--.+....|++.+++.|..++. ..++
T Consensus 5 ~~~~~L~cfP~AG---Gsa~~fr~W~~~lp~-~iel~avql----PGR~~r~~ep~~~di~~Lad~la~el~~~~~d~P~ 76 (244)
T COG3208 5 GARLRLFCFPHAG---GSASLFRSWSRRLPA-DIELLAVQL----PGRGDRFGEPLLTDIESLADELANELLPPLLDAPF 76 (244)
T ss_pred CCCceEEEecCCC---CCHHHHHHHHhhCCc-hhheeeecC----CCcccccCCcccccHHHHHHHHHHHhccccCCCCe
Confidence 4466788888777 677788888888885 799999999 899887666667777777777776443 3579
Q ss_pred EEEEEChhHHHHHHHHHh-cccccccccEEEEecccCc-hHh--hhcchhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCc
Q 018555 168 VLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSD-REY--RATLPETAAMIDLASSMIREGRGSELMPREADPCSP 243 (354)
Q Consensus 168 ~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (354)
.|+||||||++|.++|.+ ...... ..++.+.+.... ... .........+++..+++ .+...+++ +.+
T Consensus 77 alfGHSmGa~lAfEvArrl~~~g~~-p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~l--gG~p~e~l------ed~ 147 (244)
T COG3208 77 ALFGHSMGAMLAFEVARRLERAGLP-PRALFISGCRAPHYDRGKQIHHLDDADFLADLVDL--GGTPPELL------EDP 147 (244)
T ss_pred eecccchhHHHHHHHHHHHHHcCCC-cceEEEecCCCCCCcccCCccCCCHHHHHHHHHHh--CCCChHHh------cCH
Confidence 999999999999999987 433333 666666543221 111 11111123333333322 11111111 111
Q ss_pred chHHHHhhhhcccCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcC-CCeEEEecCC
Q 018555 244 ITAQRYHSLCAYMGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMG-GAEKVEIEHG 322 (354)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~-~~~~~~i~~a 322 (354)
.+..+.-+.-..|+.. +....+ ..-..+.| |+.++.|++|..|..+ ....|++... ..++.+++ +
T Consensus 148 ----El~~l~LPilRAD~~~--~e~Y~~-~~~~pl~~-pi~~~~G~~D~~vs~~-----~~~~W~~~t~~~f~l~~fd-G 213 (244)
T COG3208 148 ----ELMALFLPILRADFRA--LESYRY-PPPAPLAC-PIHAFGGEKDHEVSRD-----ELGAWREHTKGDFTLRVFD-G 213 (244)
T ss_pred ----HHHHHHHHHHHHHHHH--hccccc-CCCCCcCc-ceEEeccCcchhccHH-----HHHHHHHhhcCCceEEEec-C
Confidence 1111110100001100 000000 11146889 9999999999988877 7778888775 46778886 5
Q ss_pred Cccc-CccHHHHHHHHHHHHHh
Q 018555 323 IHSL-SNRVKEAVQAIIDFVKR 343 (354)
Q Consensus 323 gH~~-~~~p~~~~~~i~~Fl~~ 343 (354)
||++ .++.+++.+.|.+.+..
T Consensus 214 gHFfl~~~~~~v~~~i~~~l~~ 235 (244)
T COG3208 214 GHFFLNQQREEVLARLEQHLAH 235 (244)
T ss_pred cceehhhhHHHHHHHHHHHhhh
Confidence 9999 67888999999988864
No 82
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.51 E-value=7.9e-13 Score=109.18 Aligned_cols=171 Identities=19% Similarity=0.183 Sum_probs=121.8
Q ss_pred CCCcEEEEECCC--CCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCcc-----CcHHHHHHHHHHHHhhCCC
Q 018555 92 DYQQQVIFIGGL--TDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQ-----QDAMEIDQLISYLINKDNS 164 (354)
Q Consensus 92 ~~~p~vIliHG~--~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~-----~~~~dl~~~i~~l~~~~~~ 164 (354)
+..|+.|++|=- -+|-.+..--..++..|.+.||.++.||+ +|-|+|.-+ ...+|..++++|+..+...
T Consensus 26 ~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNf----RgVG~S~G~fD~GiGE~~Da~aaldW~~~~hp~ 101 (210)
T COG2945 26 PAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNF----RGVGRSQGEFDNGIGELEDAAAALDWLQARHPD 101 (210)
T ss_pred CCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecc----cccccccCcccCCcchHHHHHHHHHHHHhhCCC
Confidence 445666666541 11224445567789999999999999999 577777533 2478999999999987665
Q ss_pred CcE-EEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhhcchhHHHHHHHHHHHHhcCCCCCCCCCCCCCCC
Q 018555 165 EGV-VLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLASSMIREGRGSELMPREADPCS 242 (354)
Q Consensus 165 ~~~-~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (354)
.+. .|.|.|+|+++++.+|.+ ++ ...+|-+.|....
T Consensus 102 s~~~~l~GfSFGa~Ia~~la~r~~e-----~~~~is~~p~~~~------------------------------------- 139 (210)
T COG2945 102 SASCWLAGFSFGAYIAMQLAMRRPE-----ILVFISILPPINA------------------------------------- 139 (210)
T ss_pred chhhhhcccchHHHHHHHHHHhccc-----ccceeeccCCCCc-------------------------------------
Confidence 444 789999999999999998 54 4444433332210
Q ss_pred cchHHHHhhhhcccCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCCeEEEecCC
Q 018555 243 PITAQRYHSLCAYMGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGGAEKVEIEHG 322 (354)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~i~~a 322 (354)
.++ ..+....+ |.++|+|+.|++++.. ..-++.+. -...+++++++
T Consensus 140 ----------------~df-----------s~l~P~P~-~~lvi~g~~Ddvv~l~-----~~l~~~~~-~~~~~i~i~~a 185 (210)
T COG2945 140 ----------------YDF-----------SFLAPCPS-PGLVIQGDADDVVDLV-----AVLKWQES-IKITVITIPGA 185 (210)
T ss_pred ----------------hhh-----------hhccCCCC-CceeEecChhhhhcHH-----HHHHhhcC-CCCceEEecCC
Confidence 000 12223446 9999999999988766 33344444 34678899999
Q ss_pred CcccCccHHHHHHHHHHHHH
Q 018555 323 IHSLSNRVKEAVQAIIDFVK 342 (354)
Q Consensus 323 gH~~~~~p~~~~~~i~~Fl~ 342 (354)
+|++..+-+.+.+.|.+||+
T Consensus 186 ~HFF~gKl~~l~~~i~~~l~ 205 (210)
T COG2945 186 DHFFHGKLIELRDTIADFLE 205 (210)
T ss_pred CceecccHHHHHHHHHHHhh
Confidence 99999999999999999996
No 83
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.51 E-value=1.9e-13 Score=114.76 Aligned_cols=150 Identities=23% Similarity=0.299 Sum_probs=94.6
Q ss_pred EEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhhCC--CCcEEEEEECh
Q 018555 97 VIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDN--SEGVVLLGHST 174 (354)
Q Consensus 97 vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~~~--~~~~~LvGhS~ 174 (354)
|+++||++++. ..+++..+.+.|.+. ++|..+|+ +.+ ++.+.++.|.+.++ .++++|||||+
T Consensus 1 v~IvhG~~~s~-~~HW~~wl~~~l~~~-~~V~~~~~----------~~P----~~~~W~~~l~~~i~~~~~~~ilVaHSL 64 (171)
T PF06821_consen 1 VLIVHGYGGSP-PDHWQPWLERQLENS-VRVEQPDW----------DNP----DLDEWVQALDQAIDAIDEPTILVAHSL 64 (171)
T ss_dssp EEEE--TTSST-TTSTHHHHHHHHTTS-EEEEEC------------TS------HHHHHHHHHHCCHC-TTTEEEEEETH
T ss_pred CEEeCCCCCCC-ccHHHHHHHHhCCCC-eEEecccc----------CCC----CHHHHHHHHHHHHhhcCCCeEEEEeCH
Confidence 68999999653 455567778888875 77777766 122 44555555554321 35799999999
Q ss_pred hHHHHHHHHH-h-cccccccccEEEEecccCchHhhhcchhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcchHHHHhhh
Q 018555 175 GCQDIVHYMR-A-NAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLASSMIREGRGSELMPREADPCSPITAQRYHSL 252 (354)
Q Consensus 175 GG~~a~~~a~-~-p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (354)
||..+++|+. . .. +|.+++|++|.......... +..
T Consensus 65 Gc~~~l~~l~~~~~~----~v~g~lLVAp~~~~~~~~~~-----------------------~~~--------------- 102 (171)
T PF06821_consen 65 GCLTALRWLAEQSQK----KVAGALLVAPFDPDDPEPFP-----------------------PEL--------------- 102 (171)
T ss_dssp HHHHHHHHHHHTCCS----SEEEEEEES--SCGCHHCCT-----------------------CGG---------------
T ss_pred HHHHHHHHHhhcccc----cccEEEEEcCCCcccccchh-----------------------hhc---------------
Confidence 9999999994 4 55 99999999987543110000 000
Q ss_pred hcccCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCCeEEEecCCCccc
Q 018555 253 CAYMGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGGAEKVEIEHGIHSL 326 (354)
Q Consensus 253 ~~~~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~ 326 (354)
..+ . . .....+.. |.++|.+++|+++|.. ..+++++.+ +++++.++++||+.
T Consensus 103 ------~~f-~-~-------~p~~~l~~-~~~viaS~nDp~vp~~-----~a~~~A~~l-~a~~~~~~~~GHf~ 154 (171)
T PF06821_consen 103 ------DGF-T-P-------LPRDPLPF-PSIVIASDNDPYVPFE-----RAQRLAQRL-GAELIILGGGGHFN 154 (171)
T ss_dssp ------CCC-T-T-------SHCCHHHC-CEEEEEETTBSSS-HH-----HHHHHHHHH-T-EEEEETS-TTSS
T ss_pred ------ccc-c-c-------CcccccCC-CeEEEEcCCCCccCHH-----HHHHHHHHc-CCCeEECCCCCCcc
Confidence 000 0 0 01112345 8899999999999988 777888877 68999999999999
No 84
>COG0400 Predicted esterase [General function prediction only]
Probab=99.46 E-value=1.6e-12 Score=111.76 Aligned_cols=175 Identities=20% Similarity=0.167 Sum_probs=112.6
Q ss_pred CCCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCC---------CCCCccCc---HHHHHHHHHHH
Q 018555 91 GDYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGY---------GTSSLQQD---AMEIDQLISYL 158 (354)
Q Consensus 91 ~~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~---------G~S~~~~~---~~dl~~~i~~l 158 (354)
.+..|+|||+||+| .+...+-++.+.+.. ++.++.+--+..+.|- |.-+.++. .+.+.+.++.+
T Consensus 15 ~p~~~~iilLHG~G---gde~~~~~~~~~~~P-~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~ 90 (207)
T COG0400 15 DPAAPLLILLHGLG---GDELDLVPLPELILP-NATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEEL 90 (207)
T ss_pred CCCCcEEEEEecCC---CChhhhhhhhhhcCC-CCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHH
Confidence 35567899999999 555555556666664 6788777433222111 11111111 23344455555
Q ss_pred HhhCCC--CcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhhcchhHHHHHHHHHHHHhcCCCCCCCC
Q 018555 159 INKDNS--EGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLASSMIREGRGSELMP 235 (354)
Q Consensus 159 ~~~~~~--~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (354)
.+++++ ++++++|+|.|+++++.+..+ +. .++++|+.+|....+..
T Consensus 91 ~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~----~~~~ail~~g~~~~~~~--------------------------- 139 (207)
T COG0400 91 AEEYGIDSSRIILIGFSQGANIALSLGLTLPG----LFAGAILFSGMLPLEPE--------------------------- 139 (207)
T ss_pred HHHhCCChhheEEEecChHHHHHHHHHHhCch----hhccchhcCCcCCCCCc---------------------------
Confidence 555655 899999999999999999998 87 89999987764432100
Q ss_pred CCCCCCCcchHHHHhhhhcccCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCCe
Q 018555 236 READPCSPITAQRYHSLCAYMGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGGAE 315 (354)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~~ 315 (354)
..+.++.+|++++||+.|++||.. ...++.+.+.+..-+++
T Consensus 140 --------------------------------------~~~~~~~~pill~hG~~Dpvvp~~-~~~~l~~~l~~~g~~v~ 180 (207)
T COG0400 140 --------------------------------------LLPDLAGTPILLSHGTEDPVVPLA-LAEALAEYLTASGADVE 180 (207)
T ss_pred --------------------------------------cccccCCCeEEEeccCcCCccCHH-HHHHHHHHHHHcCCCEE
Confidence 000111139999999999999987 23345555555555677
Q ss_pred EEEecCCCcccCccHHHHHHHHHHHHHh
Q 018555 316 KVEIEHGIHSLSNRVKEAVQAIIDFVKR 343 (354)
Q Consensus 316 ~~~i~~agH~~~~~p~~~~~~i~~Fl~~ 343 (354)
...++ .||.+ +.+-.+.+.+|+.+
T Consensus 181 ~~~~~-~GH~i---~~e~~~~~~~wl~~ 204 (207)
T COG0400 181 VRWHE-GGHEI---PPEELEAARSWLAN 204 (207)
T ss_pred EEEec-CCCcC---CHHHHHHHHHHHHh
Confidence 78888 89999 33445555667765
No 85
>PRK10115 protease 2; Provisional
Probab=99.45 E-value=6e-12 Score=127.73 Aligned_cols=194 Identities=13% Similarity=0.086 Sum_probs=129.2
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCC--------CccCcHHHHHHHHHHHHhh--
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTS--------SLQQDAMEIDQLISYLINK-- 161 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S--------~~~~~~~dl~~~i~~l~~~-- 161 (354)
++.|+||++||.... .....|......|.++||.|+.++.||+ .|+|+. .+....+|+.+++++|.++
T Consensus 443 ~~~P~ll~~hGg~~~-~~~p~f~~~~~~l~~rG~~v~~~n~RGs-~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~ 520 (686)
T PRK10115 443 GHNPLLVYGYGSYGA-SIDADFSFSRLSLLDRGFVYAIVHVRGG-GELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGY 520 (686)
T ss_pred CCCCEEEEEECCCCC-CCCCCccHHHHHHHHCCcEEEEEEcCCC-CccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCC
Confidence 456999999995522 2334466666677778999999999976 467753 1335689999999999874
Q ss_pred CCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhh---cchhHHHHHHHHHHHHhcCCCCCCCCCC
Q 018555 162 DNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRA---TLPETAAMIDLASSMIREGRGSELMPRE 237 (354)
Q Consensus 162 ~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (354)
.+.+++.+.|.|.||+++...+.. |+ +++++|...|+.+..... ..+..... ..++ |.
T Consensus 521 ~d~~rl~i~G~S~GG~l~~~~~~~~Pd----lf~A~v~~vp~~D~~~~~~~~~~p~~~~~---~~e~---G~-------- 582 (686)
T PRK10115 521 GSPSLCYGMGGSAGGMLMGVAINQRPE----LFHGVIAQVPFVDVVTTMLDESIPLTTGE---FEEW---GN-------- 582 (686)
T ss_pred CChHHeEEEEECHHHHHHHHHHhcChh----heeEEEecCCchhHhhhcccCCCCCChhH---HHHh---CC--------
Confidence 346799999999999999988887 88 999999999988765321 11100000 0000 00
Q ss_pred CCCCCcchHHHHhhhhcccCCCccccCCCChHHHHHHhcCCCCCc-EEEEeeCCCCCCCchhcHHHHHHHHHHHcCCCeE
Q 018555 238 ADPCSPITAQRYHSLCAYMGDDDMFSSDLSDDQLKQRLGHMANTP-CQVIFSMADEYVPEYVDKKALVERLCRAMGGAEK 316 (354)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~~P-vLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~ 316 (354)
+..+ ....++....+ + ..+.+++. | +|+++|.+|.-||+. +..+++.++++...+.++
T Consensus 583 --p~~~-~~~~~l~~~SP-----~-----------~~v~~~~~-P~lLi~~g~~D~RV~~~-~~~k~~a~Lr~~~~~~~~ 641 (686)
T PRK10115 583 --PQDP-QYYEYMKSYSP-----Y-----------DNVTAQAY-PHLLVTTGLHDSQVQYW-EPAKWVAKLRELKTDDHL 641 (686)
T ss_pred --CCCH-HHHHHHHHcCc-----h-----------hccCccCC-CceeEEecCCCCCcCch-HHHHHHHHHHhcCCCCce
Confidence 0100 01111110001 1 34556777 9 567799999999887 455577777766556777
Q ss_pred EEe---cCCCccc
Q 018555 317 VEI---EHGIHSL 326 (354)
Q Consensus 317 ~~i---~~agH~~ 326 (354)
+++ +++||.-
T Consensus 642 vl~~~~~~~GHg~ 654 (686)
T PRK10115 642 LLLCTDMDSGHGG 654 (686)
T ss_pred EEEEecCCCCCCC
Confidence 888 9999997
No 86
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.44 E-value=6.7e-12 Score=117.19 Aligned_cols=227 Identities=14% Similarity=0.150 Sum_probs=121.2
Q ss_pred ceeeeEeeCCCCeeE-EEec--CCCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCcc---
Q 018555 72 FRGVLFKYGPKPVQV-AFKT--GDYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQ--- 145 (354)
Q Consensus 72 ~~~~~~~~~~~~~~~-~~~~--~~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~--- 145 (354)
++.....+.+..+.. .+.. +++.|+||+++|+- + .-.++|....+.|+.+|+.++++|+ +|.|.|...
T Consensus 165 i~~v~iP~eg~~I~g~LhlP~~~~p~P~VIv~gGlD-s-~qeD~~~l~~~~l~~rGiA~LtvDm----PG~G~s~~~~l~ 238 (411)
T PF06500_consen 165 IEEVEIPFEGKTIPGYLHLPSGEKPYPTVIVCGGLD-S-LQEDLYRLFRDYLAPRGIAMLTVDM----PGQGESPKWPLT 238 (411)
T ss_dssp EEEEEEEETTCEEEEEEEESSSSS-EEEEEEE--TT-S--GGGGHHHHHCCCHHCT-EEEEE------TTSGGGTTT-S-
T ss_pred cEEEEEeeCCcEEEEEEEcCCCCCCCCEEEEeCCcc-h-hHHHHHHHHHHHHHhCCCEEEEEcc----CCCcccccCCCC
Confidence 445555565443332 2222 23457888888866 2 2335566556678889999999999 899987522
Q ss_pred -CcHHHHHHHHHHHHh--hCCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHh-----hhcchhHHH
Q 018555 146 -QDAMEIDQLISYLIN--KDNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREY-----RATLPETAA 216 (354)
Q Consensus 146 -~~~~dl~~~i~~l~~--~~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~-----~~~~~~~~~ 216 (354)
+...-..+++++|.. .++..+|.++|.|+||+.|+++|.. ++ +++++|..+|+..... ....+.
T Consensus 239 ~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~----RlkavV~~Ga~vh~~ft~~~~~~~~P~--- 311 (411)
T PF06500_consen 239 QDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDP----RLKAVVALGAPVHHFFTDPEWQQRVPD--- 311 (411)
T ss_dssp S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTT----T-SEEEEES---SCGGH-HHHHTTS-H---
T ss_pred cCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhccc----ceeeEeeeCchHhhhhccHHHHhcCCH---
Confidence 222346778888877 3455699999999999999999975 77 9999999998754321 111211
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCcchHHHHhhhhcccCCCccccCCCChHHHHHHh--cCCCCCcEEEEeeCCCCCC
Q 018555 217 MIDLASSMIREGRGSELMPREADPCSPITAQRYHSLCAYMGDDDMFSSDLSDDQLKQRL--GHMANTPCQVIFSMADEYV 294 (354)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l--~~i~~~PvLvi~G~~D~~v 294 (354)
+ +...+....+ . . ......+...+....... + ..+ .+.++ |+|.+.|++|+++
T Consensus 312 m---y~d~LA~rlG-----~----~-~~~~~~l~~el~~~SLk~---q--------GlL~~rr~~~-plL~i~~~~D~v~ 366 (411)
T PF06500_consen 312 M---YLDVLASRLG-----M----A-AVSDESLRGELNKFSLKT---Q--------GLLSGRRCPT-PLLAINGEDDPVS 366 (411)
T ss_dssp H---HHHHHHHHCT----------S-CE-HHHHHHHGGGGSTTT---T--------TTTTSS-BSS--EEEEEETT-SSS
T ss_pred H---HHHHHHHHhC-----C----c-cCCHHHHHHHHHhcCcch---h--------ccccCCCCCc-ceEEeecCCCCCC
Confidence 1 1111111100 0 0 001111111111111000 0 122 45667 9999999999999
Q ss_pred CchhcHHHHHHHHHHHcCCCeEEEecCCC-cccCccHHHHHHHHHHHHHhh
Q 018555 295 PEYVDKKALVERLCRAMGGAEKVEIEHGI-HSLSNRVKEAVQAIIDFVKRE 344 (354)
Q Consensus 295 p~~~~~~~~~~~~~~~~~~~~~~~i~~ag-H~~~~~p~~~~~~i~~Fl~~~ 344 (354)
|.+ ..+.+...-.+.+...|+... |.- -+.-...+.+||++.
T Consensus 367 P~e-----D~~lia~~s~~gk~~~~~~~~~~~g---y~~al~~~~~Wl~~~ 409 (411)
T PF06500_consen 367 PIE-----DSRLIAESSTDGKALRIPSKPLHMG---YPQALDEIYKWLEDK 409 (411)
T ss_dssp -HH-----HHHHHHHTBTT-EEEEE-SSSHHHH---HHHHHHHHHHHHHHH
T ss_pred CHH-----HHHHHHhcCCCCceeecCCCccccc---hHHHHHHHHHHHHHh
Confidence 987 555566655556676666544 332 346667778888753
No 87
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.43 E-value=2e-12 Score=112.63 Aligned_cols=199 Identities=18% Similarity=0.198 Sum_probs=118.5
Q ss_pred EEEECCCCCCCCccccHHHHHHHHhh-CCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhh-----CCCCcEEEE
Q 018555 97 VIFIGGLTDGFFATEYLEPLAIALDK-ERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINK-----DNSEGVVLL 170 (354)
Q Consensus 97 vIliHG~~~~~~~~~~~~~la~~La~-~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~-----~~~~~~~Lv 170 (354)
||++||-+-..++......++..|++ .|+.|+.+|+| . ......+...+|+.++++++.+. ++.++++|+
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yr---l-~p~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~ 76 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYR---L-APEAPFPAALEDVKAAYRWLLKNADKLGIDPERIVLI 76 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE-------TTTSSTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecc---c-cccccccccccccccceeeeccccccccccccceEEe
Confidence 78999966544455555556666664 79999999997 3 35556788899999999999986 667899999
Q ss_pred EEChhHHHHHHHHHh-cccccccccEEEEecccCch-HhhhcchhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcchHHH
Q 018555 171 GHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDR-EYRATLPETAAMIDLASSMIREGRGSELMPREADPCSPITAQR 248 (354)
Q Consensus 171 GhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (354)
|+|-||.+|+.++.+ .+.....++++++++|+.+. ... ... ... .... .. ..+++ ......
T Consensus 77 G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~--~~~---~~~-~~~~-~~---~~~~~-------~~~~~~ 139 (211)
T PF07859_consen 77 GDSAGGHLALSLALRARDRGLPKPKGIILISPWTDLQDFD--GPS---YDD-SNEN-KD---DPFLP-------APKIDW 139 (211)
T ss_dssp EETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSS--CHH---HHH-HHHH-ST---TSSSB-------HHHHHH
T ss_pred ecccccchhhhhhhhhhhhcccchhhhhcccccccchhcc--ccc---ccc-cccc-cc---ccccc-------cccccc
Confidence 999999999999987 44334469999999997654 110 000 000 0000 00 00010 001111
Q ss_pred Hhhhhcc--cCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCCeEEEecCCCccc
Q 018555 249 YHSLCAY--MGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGGAEKVEIEHGIHSL 326 (354)
Q Consensus 249 ~~~~~~~--~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~ 326 (354)
+...... ......++.... ..+..+ . |+++++|++|.+++. ...+.+++++....+++++++++.|..
T Consensus 140 ~~~~~~~~~~~~~~~~sp~~~-----~~~~~~-P-p~~i~~g~~D~l~~~---~~~~~~~L~~~gv~v~~~~~~g~~H~f 209 (211)
T PF07859_consen 140 FWKLYLPGSDRDDPLASPLNA-----SDLKGL-P-PTLIIHGEDDVLVDD---SLRFAEKLKKAGVDVELHVYPGMPHGF 209 (211)
T ss_dssp HHHHHHSTGGTTSTTTSGGGS-----SCCTTC-H-EEEEEEETTSTTHHH---HHHHHHHHHHTT-EEEEEEETTEETTG
T ss_pred ccccccccccccccccccccc-----cccccC-C-CeeeeccccccchHH---HHHHHHHHHHCCCCEEEEEECCCeEEe
Confidence 1111110 000001000000 012222 3 999999999987642 345778888766678899999999976
No 88
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.42 E-value=2.4e-11 Score=107.57 Aligned_cols=175 Identities=18% Similarity=0.182 Sum_probs=123.8
Q ss_pred cEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCC------------------ccCcHHHHHHHHH
Q 018555 95 QQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSS------------------LQQDAMEIDQLIS 156 (354)
Q Consensus 95 p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~------------------~~~~~~dl~~~i~ 156 (354)
|.||++|++. +-..+.+.+++.|+++||.|+++|+= ...|.+. ......|+.+.++
T Consensus 28 P~VIv~hei~---Gl~~~i~~~a~rlA~~Gy~v~~Pdl~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~ 101 (236)
T COG0412 28 PGVIVLHEIF---GLNPHIRDVARRLAKAGYVVLAPDLY---GRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALD 101 (236)
T ss_pred CEEEEEeccc---CCchHHHHHHHHHHhCCcEEEechhh---ccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHH
Confidence 8999999988 56668899999999999999999982 1112111 1223568889999
Q ss_pred HHHhhC--CCCcEEEEEEChhHHHHHHHHHhcccccccccEEEEecccCchHhhhcchhHHHHHHHHHHHHhcCCCCCCC
Q 018555 157 YLINKD--NSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLASSMIREGRGSELM 234 (354)
Q Consensus 157 ~l~~~~--~~~~~~LvGhS~GG~~a~~~a~~p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (354)
+|..+. +.+++.++|+||||.+++.++.+.. .|++.+..-+.....
T Consensus 102 ~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~----~v~a~v~fyg~~~~~---------------------------- 149 (236)
T COG0412 102 YLARQPQVDPKRIGVVGFCMGGGLALLAATRAP----EVKAAVAFYGGLIAD---------------------------- 149 (236)
T ss_pred HHHhCCCCCCceEEEEEEcccHHHHHHhhcccC----CccEEEEecCCCCCC----------------------------
Confidence 998643 4678999999999999999998843 577777532211000
Q ss_pred CCCCCCCCcchHHHHhhhhcccCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCC
Q 018555 235 PREADPCSPITAQRYHSLCAYMGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGGA 314 (354)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~ 314 (354)
.. ....++++ |+|+++|+.|..+|.. ..+.+.+.+.+.....
T Consensus 150 -------------------------~~-----------~~~~~~~~-pvl~~~~~~D~~~p~~-~~~~~~~~~~~~~~~~ 191 (236)
T COG0412 150 -------------------------DT-----------ADAPKIKV-PVLLHLAGEDPYIPAA-DVDALAAALEDAGVKV 191 (236)
T ss_pred -------------------------cc-----------cccccccC-cEEEEecccCCCCChh-HHHHHHHHHHhcCCCe
Confidence 00 11346788 9999999999999877 2333444444443457
Q ss_pred eEEEecCCCcccC-cc-----------HHHHHHHHHHHHHhhC
Q 018555 315 EKVEIEHGIHSLS-NR-----------VKEAVQAIIDFVKREG 345 (354)
Q Consensus 315 ~~~~i~~agH~~~-~~-----------p~~~~~~i~~Fl~~~~ 345 (354)
++.+++++.|.+. .. .+...+.+.+|+++..
T Consensus 192 ~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~ 234 (236)
T COG0412 192 DLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLL 234 (236)
T ss_pred eEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhc
Confidence 7899999999984 21 1356778888888753
No 89
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.39 E-value=4.4e-12 Score=120.60 Aligned_cols=103 Identities=17% Similarity=0.114 Sum_probs=77.8
Q ss_pred CCCcEEEEECCCCCCCCccccHHH-HHHHHhh--CCcEEEEEcccccCCCCCCCCccCc-------HHHHHHHHHHHHhh
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEP-LAIALDK--ERWSLVQFLMTSSYTGYGTSSLQQD-------AMEIDQLISYLINK 161 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~-la~~La~--~g~~Via~D~R~~~~G~G~S~~~~~-------~~dl~~~i~~l~~~ 161 (354)
..+|++|+||||+.. .....|.. +++.|.+ ..|+||++|+ +|+|.+..+.. .+++++++++|.+.
T Consensus 39 ~~~ptvIlIHG~~~s-~~~~~w~~~l~~al~~~~~d~nVI~VDw----~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~ 113 (442)
T TIGR03230 39 HETKTFIVIHGWTVT-GMFESWVPKLVAALYEREPSANVIVVDW----LSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEE 113 (442)
T ss_pred CCCCeEEEECCCCcC-CcchhhHHHHHHHHHhccCCCEEEEEEC----CCcCCCCCccccccHHHHHHHHHHHHHHHHHh
Confidence 457999999999842 12234554 6665532 3699999999 78888764421 35677888887653
Q ss_pred --CCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccC
Q 018555 162 --DNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVS 203 (354)
Q Consensus 162 --~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~ 203 (354)
++.++++||||||||.+|..++.+ +. +|.++++++|..
T Consensus 114 ~gl~l~~VhLIGHSLGAhIAg~ag~~~p~----rV~rItgLDPAg 154 (442)
T TIGR03230 114 FNYPWDNVHLLGYSLGAHVAGIAGSLTKH----KVNRITGLDPAG 154 (442)
T ss_pred hCCCCCcEEEEEECHHHHHHHHHHHhCCc----ceeEEEEEcCCC
Confidence 357899999999999999999887 77 899999999853
No 90
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.37 E-value=2.8e-11 Score=106.70 Aligned_cols=106 Identities=19% Similarity=0.264 Sum_probs=83.5
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHh----------h
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLIN----------K 161 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~----------~ 161 (354)
+.=|+|||+||+. ....++..+.++++..||-|+++|+ ..........+.+++.++++|+.+ +
T Consensus 15 g~yPVv~f~~G~~---~~~s~Ys~ll~hvAShGyIVV~~d~----~~~~~~~~~~~~~~~~~vi~Wl~~~L~~~l~~~v~ 87 (259)
T PF12740_consen 15 GTYPVVLFLHGFL---LINSWYSQLLEHVASHGYIVVAPDL----YSIGGPDDTDEVASAAEVIDWLAKGLESKLPLGVK 87 (259)
T ss_pred CCcCEEEEeCCcC---CCHHHHHHHHHHHHhCceEEEEecc----cccCCCCcchhHHHHHHHHHHHHhcchhhcccccc
Confidence 4569999999999 6666789999999999999999997 344444445567788888888766 2
Q ss_pred CCCCcEEEEEEChhHHHHHHHHHhcc--cccccccEEEEecccCc
Q 018555 162 DNSEGVVLLGHSTGCQDIVHYMRANA--ACSRAVRAAIFQAPVSD 204 (354)
Q Consensus 162 ~~~~~~~LvGhS~GG~~a~~~a~~p~--~~~~~v~~lIl~~p~~~ 204 (354)
.+..++.|.|||-||-+|+.++.... ....+++++|+++|+..
T Consensus 88 ~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG 132 (259)
T PF12740_consen 88 PDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDG 132 (259)
T ss_pred ccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccc
Confidence 35679999999999999998887621 11237999999999874
No 91
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.35 E-value=3e-11 Score=100.93 Aligned_cols=186 Identities=16% Similarity=0.229 Sum_probs=123.7
Q ss_pred cEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhhCCCCcEEEEEECh
Q 018555 95 QQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLGHST 174 (354)
Q Consensus 95 p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~~~~~~~~LvGhS~ 174 (354)
..+||+-|=| +-...-..+++.|+++|+.|+.+|-+.. =+-+-+.++.+.|+.+++++..++.+.++++|+|.|+
T Consensus 3 t~~v~~SGDg---Gw~~~d~~~a~~l~~~G~~VvGvdsl~Y--fw~~rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYSF 77 (192)
T PF06057_consen 3 TLAVFFSGDG---GWRDLDKQIAEALAKQGVPVVGVDSLRY--FWSERTPEQTAADLARIIRHYRARWGRKRVVLIGYSF 77 (192)
T ss_pred EEEEEEeCCC---CchhhhHHHHHHHHHCCCeEEEechHHH--HhhhCCHHHHHHHHHHHHHHHHHHhCCceEEEEeecC
Confidence 3577777744 3445567899999999999999996311 1123334456789999999999888899999999999
Q ss_pred hHHHHHHHHHh-cccccccccEEEEecccCchHhhhcchhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcchHHHHhhhh
Q 018555 175 GCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLASSMIREGRGSELMPREADPCSPITAQRYHSLC 253 (354)
Q Consensus 175 GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (354)
|+-+......+ |.....+|..++|++|.....+..... . |+...
T Consensus 78 GADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~~dFeihv~----------~-------------------------wlg~~ 122 (192)
T PF06057_consen 78 GADVLPFIYNRLPAALRARVAQVVLLSPSTTADFEIHVS----------G-------------------------WLGMG 122 (192)
T ss_pred CchhHHHHHhhCCHHHHhheeEEEEeccCCcceEEEEhh----------h-------------------------hcCCC
Confidence 99888877777 766677999999999866544322210 0 11000
Q ss_pred cccCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCC--CCCchhcHHHHHHHHHHHcCCCeEEEecCCCcccCccHH
Q 018555 254 AYMGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADE--YVPEYVDKKALVERLCRAMGGAEKVEIEHGIHSLSNRVK 331 (354)
Q Consensus 254 ~~~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~--~vp~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~~p~ 331 (354)
.... .+ .....+.++...|+++|+|+++. .+|.- . .++.+.+.+|| ||.+.++.+
T Consensus 123 ~~~~--~~--------~~~pei~~l~~~~v~CiyG~~E~d~~cp~l----------~--~~~~~~i~lpG-gHHfd~dy~ 179 (192)
T PF06057_consen 123 GDDA--AY--------PVIPEIAKLPPAPVQCIYGEDEDDSLCPSL----------R--QPGVEVIALPG-GHHFDGDYD 179 (192)
T ss_pred CCcc--cC--------CchHHHHhCCCCeEEEEEcCCCCCCcCccc----------c--CCCcEEEEcCC-CcCCCCCHH
Confidence 0000 00 01133444444499999999864 33322 1 25688888886 666656688
Q ss_pred HHHHHHHHHHHh
Q 018555 332 EAVQAIIDFVKR 343 (354)
Q Consensus 332 ~~~~~i~~Fl~~ 343 (354)
.+++.|++-|+.
T Consensus 180 ~La~~Il~~l~~ 191 (192)
T PF06057_consen 180 ALAKRILDALKA 191 (192)
T ss_pred HHHHHHHHHHhc
Confidence 888888876653
No 92
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.35 E-value=6.4e-11 Score=118.03 Aligned_cols=104 Identities=15% Similarity=0.013 Sum_probs=81.6
Q ss_pred CCCcEEEEECCCCCCCCccc----cHHHHHHHHhhCCcEEEEEcccccCCCCCCCCc------cCcHHHHHHHHHHHHhh
Q 018555 92 DYQQQVIFIGGLTDGFFATE----YLEPLAIALDKERWSLVQFLMTSSYTGYGTSSL------QQDAMEIDQLISYLINK 161 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~----~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~------~~~~~dl~~~i~~l~~~ 161 (354)
++.|+||++||++ .... +....+..|+++||.|+++|+ +|+|.|.. ....+|+.++++++.++
T Consensus 20 ~~~P~Il~~~gyg---~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~----RG~g~S~g~~~~~~~~~~~D~~~~i~~l~~q 92 (550)
T TIGR00976 20 GPVPVILSRTPYG---KDAGLRWGLDKTEPAWFVAQGYAVVIQDT----RGRGASEGEFDLLGSDEAADGYDLVDWIAKQ 92 (550)
T ss_pred CCCCEEEEecCCC---CchhhccccccccHHHHHhCCcEEEEEec----cccccCCCceEecCcccchHHHHHHHHHHhC
Confidence 3578999999999 3321 222345677778999999999 58888753 45678999999999764
Q ss_pred -CCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchH
Q 018555 162 -DNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDRE 206 (354)
Q Consensus 162 -~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~ 206 (354)
....++.++||||||.+++.+|.. |+ .++++|..++..+..
T Consensus 93 ~~~~~~v~~~G~S~GG~~a~~~a~~~~~----~l~aiv~~~~~~d~~ 135 (550)
T TIGR00976 93 PWCDGNVGMLGVSYLAVTQLLAAVLQPP----ALRAIAPQEGVWDLY 135 (550)
T ss_pred CCCCCcEEEEEeChHHHHHHHHhccCCC----ceeEEeecCcccchh
Confidence 233689999999999999999988 77 899999988766543
No 93
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.34 E-value=2e-10 Score=97.65 Aligned_cols=184 Identities=17% Similarity=0.180 Sum_probs=103.2
Q ss_pred EEEECCCCCCCCccccHHHHHHHHhhCC--cEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhhCCCCcEEEEEECh
Q 018555 97 VIFIGGLTDGFFATEYLEPLAIALDKER--WSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLGHST 174 (354)
Q Consensus 97 vIliHG~~~~~~~~~~~~~la~~La~~g--~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~~~~~~~~LvGhS~ 174 (354)
||++|||..+..+. .-..+.+.+++.+ ..++.+|+ +....+..+.++.+.++...+.++|||+||
T Consensus 2 ilYlHGF~Ssp~S~-Ka~~l~~~~~~~~~~~~~~~p~l------------~~~p~~a~~~l~~~i~~~~~~~~~liGSSl 68 (187)
T PF05728_consen 2 ILYLHGFNSSPQSF-KAQALKQYFAEHGPDIQYPCPDL------------PPFPEEAIAQLEQLIEELKPENVVLIGSSL 68 (187)
T ss_pred eEEecCCCCCCCCH-HHHHHHHHHHHhCCCceEECCCC------------CcCHHHHHHHHHHHHHhCCCCCeEEEEECh
Confidence 79999999554332 2456677777654 45666666 222334444444444444455699999999
Q ss_pred hHHHHHHHHHhcccccccccEEEEecccCchHhhhcchhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcchHHHHhhhhc
Q 018555 175 GCQDIVHYMRANAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLASSMIREGRGSELMPREADPCSPITAQRYHSLCA 254 (354)
Q Consensus 175 GG~~a~~~a~~p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (354)
||+.|..++.+. .+++ ||++|...+... + ++.+... ..+... ..-......+..+
T Consensus 69 GG~~A~~La~~~-----~~~a-vLiNPav~p~~~--------l----~~~iG~~----~~~~~~-e~~~~~~~~~~~l-- 123 (187)
T PF05728_consen 69 GGFYATYLAERY-----GLPA-VLINPAVRPYEL--------L----QDYIGEQ----TNPYTG-ESYELTEEHIEEL-- 123 (187)
T ss_pred HHHHHHHHHHHh-----CCCE-EEEcCCCCHHHH--------H----HHhhCcc----ccCCCC-ccceechHhhhhc--
Confidence 999999998772 2333 888987776421 1 1111110 000000 0000000000000
Q ss_pred ccCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCCeEEEecCCCcccCccHHHHH
Q 018555 255 YMGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGGAEKVEIEHGIHSLSNRVKEAV 334 (354)
Q Consensus 255 ~~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~~p~~~~ 334 (354)
..+ ......-.. ++++++++.|++++.. ...+...++..++.+|++|.+.+ -++..
T Consensus 124 ----~~l----------~~~~~~~~~-~~lvll~~~DEvLd~~--------~a~~~~~~~~~~i~~ggdH~f~~-f~~~l 179 (187)
T PF05728_consen 124 ----KAL----------EVPYPTNPE-RYLVLLQTGDEVLDYR--------EAVAKYRGCAQIIEEGGDHSFQD-FEEYL 179 (187)
T ss_pred ----ceE----------eccccCCCc-cEEEEEecCCcccCHH--------HHHHHhcCceEEEEeCCCCCCcc-HHHHH
Confidence 000 000012345 9999999999999865 12233345667778999999964 44666
Q ss_pred HHHHHHHH
Q 018555 335 QAIIDFVK 342 (354)
Q Consensus 335 ~~i~~Fl~ 342 (354)
..|++|++
T Consensus 180 ~~i~~f~~ 187 (187)
T PF05728_consen 180 PQIIAFLQ 187 (187)
T ss_pred HHHHHhhC
Confidence 67888863
No 94
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.34 E-value=7.1e-12 Score=113.74 Aligned_cols=101 Identities=19% Similarity=0.231 Sum_probs=75.3
Q ss_pred CCCcEEEEECCCCCCCCcc-ccH-HHHHHH-HhhCCcEEEEEcccccCCCCCCCCccC-------cHHHHHHHHHHHHhh
Q 018555 92 DYQQQVIFIGGLTDGFFAT-EYL-EPLAIA-LDKERWSLVQFLMTSSYTGYGTSSLQQ-------DAMEIDQLISYLINK 161 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~-~~~-~~la~~-La~~g~~Via~D~R~~~~G~G~S~~~~-------~~~dl~~~i~~l~~~ 161 (354)
..+|++|+||||+. +. ..| ..+++. |.+.+|+|+++|+ ++++....+. ..+++.++++.|.+.
T Consensus 34 ~~~p~vilIHG~~~---~~~~~~~~~l~~~ll~~~~~nVi~vD~----~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~ 106 (275)
T cd00707 34 PSRPTRFIIHGWTS---SGEESWISDLRKAYLSRGDYNVIVVDW----GRGANPNYPQAVNNTRVVGAELAKFLDFLVDN 106 (275)
T ss_pred CCCCcEEEEcCCCC---CCCCcHHHHHHHHHHhcCCCEEEEEEC----ccccccChHHHHHhHHHHHHHHHHHHHHHHHh
Confidence 45789999999994 33 334 455554 4445899999999 4554333221 235677888888765
Q ss_pred --CCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccC
Q 018555 162 --DNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVS 203 (354)
Q Consensus 162 --~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~ 203 (354)
.+.++++||||||||.+|..++.+ ++ +|+++|+++|..
T Consensus 107 ~g~~~~~i~lIGhSlGa~vAg~~a~~~~~----~v~~iv~LDPa~ 147 (275)
T cd00707 107 TGLSLENVHLIGHSLGAHVAGFAGKRLNG----KLGRITGLDPAG 147 (275)
T ss_pred cCCChHHEEEEEecHHHHHHHHHHHHhcC----ccceeEEecCCc
Confidence 456799999999999999999988 77 899999998864
No 95
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.33 E-value=9.4e-11 Score=106.87 Aligned_cols=238 Identities=17% Similarity=0.132 Sum_probs=142.4
Q ss_pred CCCcEEEEECCCCCCCCccc--------cHHHHHH---HHhhCCcEEEEEcccccCCCCC-CCCc---------------
Q 018555 92 DYQQQVIFIGGLTDGFFATE--------YLEPLAI---ALDKERWSLVQFLMTSSYTGYG-TSSL--------------- 144 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~--------~~~~la~---~La~~g~~Via~D~R~~~~G~G-~S~~--------------- 144 (354)
....+||++|++++...... ||+.++. .+.-..|.||++|. .|.+ -|+-
T Consensus 49 ~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~Nv----lG~c~GStgP~s~~p~g~~yg~~F 124 (368)
T COG2021 49 EKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNV----LGGCKGSTGPSSINPGGKPYGSDF 124 (368)
T ss_pred cCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecC----CCCCCCCCCCCCcCCCCCccccCC
Confidence 45679999999996433444 7887754 35556799999998 4443 2221
Q ss_pred c-CcHHHHHHHHHHHHhhCCCCcEE-EEEEChhHHHHHHHHHh-cccccccccEEEEecccCch--Hhhhc---------
Q 018555 145 Q-QDAMEIDQLISYLINKDNSEGVV-LLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDR--EYRAT--------- 210 (354)
Q Consensus 145 ~-~~~~dl~~~i~~l~~~~~~~~~~-LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~--~~~~~--------- 210 (354)
| -.+.|+..+-+.|.+.+|++++. +||-||||+.|++++.. |+ +|+.+|.++..... .....
T Consensus 125 P~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd----~V~~~i~ia~~~r~s~~~ia~~~~~r~AI~ 200 (368)
T COG2021 125 PVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPD----RVRRAIPIATAARLSAQNIAFNEVQRQAIE 200 (368)
T ss_pred CcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChH----HHhhhheecccccCCHHHHHHHHHHHHHHH
Confidence 1 12567776667777889999986 99999999999999998 99 99999887653211 10000
Q ss_pred -chh-----------HHHHHHHHHHH----------HhcCCCCCCCCCC-CCCCCcchHHHHhhhhccc-----------
Q 018555 211 -LPE-----------TAAMIDLASSM----------IREGRGSELMPRE-ADPCSPITAQRYHSLCAYM----------- 256 (354)
Q Consensus 211 -~~~-----------~~~~~~~~~~~----------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----------- 256 (354)
-+. ...-+..++.+ +.+.......... ...........++......
T Consensus 201 ~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf~~rfDaNsYL 280 (368)
T COG2021 201 ADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKFVARFDANSYL 280 (368)
T ss_pred hCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHHHhccCcchHH
Confidence 000 01111112211 1110000000000 0001111222222211100
Q ss_pred ---CCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCCe-E-EEecCCCccc-CccH
Q 018555 257 ---GDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGGAE-K-VEIEHGIHSL-SNRV 330 (354)
Q Consensus 257 ---~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~~-~-~~i~~agH~~-~~~p 330 (354)
...+++.......++.+.|.+++. |+|++--+.|.+.|++ ..+.+.+.++.+. + ++-...||.- +.+.
T Consensus 281 ~lt~ald~~D~s~~~~~l~~al~~i~~-~~lv~gi~sD~lfp~~-----~~~~~~~~L~~~~~~~~i~S~~GHDaFL~e~ 354 (368)
T COG2021 281 YLTRALDYHDVSRGRGDLTAALARIKA-PVLVVGITSDWLFPPE-----LQRALAEALPAAGALREIDSPYGHDAFLVES 354 (368)
T ss_pred HHHHHHHhcCCCCCcCcHHHHHhcCcc-CEEEEEecccccCCHH-----HHHHHHHhccccCceEEecCCCCchhhhcch
Confidence 001111111223456678999999 9999999999999998 6677777777766 5 4455689998 6677
Q ss_pred HHHHHHHHHHHHh
Q 018555 331 KEAVQAIIDFVKR 343 (354)
Q Consensus 331 ~~~~~~i~~Fl~~ 343 (354)
+.+...|..||+.
T Consensus 355 ~~~~~~i~~fL~~ 367 (368)
T COG2021 355 EAVGPLIRKFLAL 367 (368)
T ss_pred hhhhHHHHHHhhc
Confidence 7899999999975
No 96
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.32 E-value=1.4e-10 Score=107.11 Aligned_cols=203 Identities=14% Similarity=0.054 Sum_probs=110.9
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCC-CC--------------------C-ccC---
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYG-TS--------------------S-LQQ--- 146 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G-~S--------------------~-~~~--- 146 (354)
++-|.||.+||++ .....|..... ++.+||.|+.+|.| |.| .+ + .++
T Consensus 81 ~~~Pavv~~hGyg---~~~~~~~~~~~-~a~~G~~vl~~d~r----Gqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yy 152 (320)
T PF05448_consen 81 GKLPAVVQFHGYG---GRSGDPFDLLP-WAAAGYAVLAMDVR----GQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYY 152 (320)
T ss_dssp SSEEEEEEE--TT-----GGGHHHHHH-HHHTT-EEEEE--T----TTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HH
T ss_pred CCcCEEEEecCCC---CCCCCcccccc-cccCCeEEEEecCC----CCCCCCCCccccCCCCCccHHhcCccCchHHHHH
Confidence 4568999999999 55555655544 45579999999996 443 11 0 111
Q ss_pred --cHHHHHHHHHHHHhh--CCCCcEEEEEEChhHHHHHHHHHhcccccccccEEEEecccCchHhh-hcc----hhHHHH
Q 018555 147 --DAMEIDQLISYLINK--DNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDREYR-ATL----PETAAM 217 (354)
Q Consensus 147 --~~~dl~~~i~~l~~~--~~~~~~~LvGhS~GG~~a~~~a~~p~~~~~~v~~lIl~~p~~~~~~~-~~~----~~~~~~ 217 (354)
...|...++++|... .+.+++.+.|.|+||.+++.+|+..+ +|++++..-|....... ... .....+
T Consensus 153 r~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~----rv~~~~~~vP~l~d~~~~~~~~~~~~~y~~~ 228 (320)
T PF05448_consen 153 RRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP----RVKAAAADVPFLCDFRRALELRADEGPYPEI 228 (320)
T ss_dssp HHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS----T-SEEEEESESSSSHHHHHHHT--STTTHHH
T ss_pred HHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc----cccEEEecCCCccchhhhhhcCCccccHHHH
Confidence 135777788888763 45579999999999999999998855 89999998875433211 100 000111
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCcchHHHHhhhhcccCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCch
Q 018555 218 IDLASSMIREGRGSELMPREADPCSPITAQRYHSLCAYMGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEY 297 (354)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~ 297 (354)
..+.+. . . ..+.......+.+ ..-+......+|++ |+++-.|-.|+++|+.
T Consensus 229 ~~~~~~-~-d-------------~~~~~~~~v~~~L-------------~Y~D~~nfA~ri~~-pvl~~~gl~D~~cPP~ 279 (320)
T PF05448_consen 229 RRYFRW-R-D-------------PHHEREPEVFETL-------------SYFDAVNFARRIKC-PVLFSVGLQDPVCPPS 279 (320)
T ss_dssp HHHHHH-H-S-------------CTHCHHHHHHHHH-------------HTT-HHHHGGG--S-EEEEEEETT-SSS-HH
T ss_pred HHHHhc-c-C-------------CCcccHHHHHHHH-------------hhhhHHHHHHHcCC-CEEEEEecCCCCCCch
Confidence 111110 0 0 0000111111100 00112245678999 9999999999999988
Q ss_pred hcHHHHHHHHHHHc-CCCeEEEecCCCcccCccHHHH-HHHHHHHHHh
Q 018555 298 VDKKALVERLCRAM-GGAEKVEIEHGIHSLSNRVKEA-VQAIIDFVKR 343 (354)
Q Consensus 298 ~~~~~~~~~~~~~~-~~~~~~~i~~agH~~~~~p~~~-~~~i~~Fl~~ 343 (354)
. .-...+.+ ..+++++++..+|.. ..++ .+...+||++
T Consensus 280 t-----~fA~yN~i~~~K~l~vyp~~~He~---~~~~~~~~~~~~l~~ 319 (320)
T PF05448_consen 280 T-----QFAAYNAIPGPKELVVYPEYGHEY---GPEFQEDKQLNFLKE 319 (320)
T ss_dssp H-----HHHHHCC--SSEEEEEETT--SST---THHHHHHHHHHHHHH
T ss_pred h-----HHHHHhccCCCeeEEeccCcCCCc---hhhHHHHHHHHHHhc
Confidence 2 22222333 347899999999987 3344 6677778765
No 97
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.29 E-value=2.6e-11 Score=102.92 Aligned_cols=222 Identities=13% Similarity=0.116 Sum_probs=127.6
Q ss_pred EEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCcc-----------CcHHHHHHHHHHHHhhCCC
Q 018555 96 QVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQ-----------QDAMEIDQLISYLINKDNS 164 (354)
Q Consensus 96 ~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~-----------~~~~dl~~~i~~l~~~~~~ 164 (354)
.|+.-.+++ ....++++++..++++||.|+.+|+ +|-|.|+.. ....|+.+.++++++..+-
T Consensus 32 ~~~va~a~G---v~~~fYRrfA~~a~~~Gf~Vlt~dy----RG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~~ 104 (281)
T COG4757 32 RLVVAGATG---VGQYFYRRFAAAAAKAGFEVLTFDY----RGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALPG 104 (281)
T ss_pred cEEecccCC---cchhHhHHHHHHhhccCceEEEEec----ccccCCCccccccCccchhhhhhcchHHHHHHHHhhCCC
Confidence 555556666 6677789999999999999999999 588877532 1246899999999987777
Q ss_pred CcEEEEEEChhHHHHHHHHHhcccccccccEEEEecccCchHhhhcchhHHHHHHHHHHHHhcCC----CCCCCCCCCCC
Q 018555 165 EGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLASSMIREGR----GSELMPREADP 240 (354)
Q Consensus 165 ~~~~LvGhS~GG~~a~~~a~~p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 240 (354)
.+.+.|||||||.+.-.+...+ +..+....+...... ..+.....+.. ...+..-+. ....++.....
T Consensus 105 ~P~y~vgHS~GGqa~gL~~~~~-----k~~a~~vfG~gagws--g~m~~~~~l~~-~~l~~lv~p~lt~w~g~~p~~l~G 176 (281)
T COG4757 105 HPLYFVGHSFGGQALGLLGQHP-----KYAAFAVFGSGAGWS--GWMGLRERLGA-VLLWNLVGPPLTFWKGYMPKDLLG 176 (281)
T ss_pred CceEEeeccccceeecccccCc-----ccceeeEeccccccc--cchhhhhcccc-eeeccccccchhhccccCcHhhcC
Confidence 8999999999998654443333 222222221111110 00000000000 000000000 00011111111
Q ss_pred ---CCcchH-HHHhhhhcccCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCCeE
Q 018555 241 ---CSPITA-QRYHSLCAYMGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGGAEK 316 (354)
Q Consensus 241 ---~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~ 316 (354)
+.+... +.|...+..+ .++..+-.....++.+..+.. |+..+...+|+.+|+. -.+.+....+|+.+
T Consensus 177 ~G~d~p~~v~RdW~RwcR~p---~y~fddp~~~~~~q~yaaVrt-Pi~~~~~~DD~w~P~A-----s~d~f~~~y~nApl 247 (281)
T COG4757 177 LGSDLPGTVMRDWARWCRHP---RYYFDDPAMRNYRQVYAAVRT-PITFSRALDDPWAPPA-----SRDAFASFYRNAPL 247 (281)
T ss_pred CCccCcchHHHHHHHHhcCc---cccccChhHhHHHHHHHHhcC-ceeeeccCCCCcCCHH-----HHHHHHHhhhcCcc
Confidence 222222 2233333222 121111122335577888998 9999999999999988 67777777777665
Q ss_pred E--EecC----CCccc-CccH-HHHHHHHHHHH
Q 018555 317 V--EIEH----GIHSL-SNRV-KEAVQAIIDFV 341 (354)
Q Consensus 317 ~--~i~~----agH~~-~~~p-~~~~~~i~~Fl 341 (354)
. .++. -||+- ..++ |.+.+.+++|+
T Consensus 248 ~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 248 EMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred cceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 4 3444 48988 5555 77788887775
No 98
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.29 E-value=3.5e-10 Score=104.77 Aligned_cols=217 Identities=15% Similarity=0.074 Sum_probs=132.5
Q ss_pred CCcEEEEECCCCCCCCccccH-HHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhh-----CCCCc
Q 018555 93 YQQQVIFIGGLTDGFFATEYL-EPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINK-----DNSEG 166 (354)
Q Consensus 93 ~~p~vIliHG~~~~~~~~~~~-~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~-----~~~~~ 166 (354)
..|+||++||-+--.++.... ..+...+...|+.|+.+||| -...-..+...+|+.+.+.++.+. .+.++
T Consensus 78 ~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYr----laPe~~~p~~~~d~~~a~~~l~~~~~~~g~dp~~ 153 (312)
T COG0657 78 TAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYR----LAPEHPFPAALEDAYAAYRWLRANAAELGIDPSR 153 (312)
T ss_pred CCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCC----CCCCCCCCchHHHHHHHHHHHHhhhHhhCCCccc
Confidence 479999999966433444444 55566666689999999996 333336888899999999999864 34689
Q ss_pred EEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhhcchhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcch
Q 018555 167 VVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLASSMIREGRGSELMPREADPCSPIT 245 (354)
Q Consensus 167 ~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (354)
++|+|+|-||.+++.++.. .+.......+.+++.|..+... ... .. ...+.. .. .....
T Consensus 154 i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~-~~~-~~----------~~~~~~-~~-------~~~~~ 213 (312)
T COG0657 154 IAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS-SAA-SL----------PGYGEA-DL-------LDAAA 213 (312)
T ss_pred eEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc-ccc-ch----------hhcCCc-cc-------cCHHH
Confidence 9999999999999999987 4323446788999998876543 100 00 000000 00 00000
Q ss_pred HH-HHhhhhccc--CCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCCeEEEecCC
Q 018555 246 AQ-RYHSLCAYM--GDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGGAEKVEIEHG 322 (354)
Q Consensus 246 ~~-~~~~~~~~~--~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~i~~a 322 (354)
.. .+....... ...+.....+.. ..+.. -. |+++++|+.|.+.+. ...+.+++++.....+++.+++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~p~~spl~~----~~~~~-lP-P~~i~~a~~D~l~~~---~~~~a~~L~~agv~~~~~~~~g~ 284 (312)
T COG0657 214 ILAWFADLYLGAAPDREDPEASPLAS----DDLSG-LP-PTLIQTAEFDPLRDE---GEAYAERLRAAGVPVELRVYPGM 284 (312)
T ss_pred HHHHHHHHhCcCccccCCCccCcccc----ccccC-CC-CEEEEecCCCcchhH---HHHHHHHHHHcCCeEEEEEeCCc
Confidence 00 000000000 000000000110 11333 34 999999999998873 34577888887777889999999
Q ss_pred Cccc--CccHH--HHHHHHHHHHH
Q 018555 323 IHSL--SNRVK--EAVQAIIDFVK 342 (354)
Q Consensus 323 gH~~--~~~p~--~~~~~i~~Fl~ 342 (354)
.|.+ ...+. +....+.+|+.
T Consensus 285 ~H~f~~~~~~~a~~~~~~~~~~l~ 308 (312)
T COG0657 285 IHGFDLLTGPEARSALRQIAAFLR 308 (312)
T ss_pred ceeccccCcHHHHHHHHHHHHHHH
Confidence 9987 33332 33445666665
No 99
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.28 E-value=2.3e-10 Score=100.74 Aligned_cols=100 Identities=17% Similarity=0.310 Sum_probs=80.1
Q ss_pred CcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCc----HHHHHHHHHHHHhhCCC-CcEE
Q 018555 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQD----AMEIDQLISYLINKDNS-EGVV 168 (354)
Q Consensus 94 ~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~----~~dl~~~i~~l~~~~~~-~~~~ 168 (354)
..+||=+||-+ ++..-++-+...|.++|.|+|.+++ +|+|.++.+.+ -.+-...++.|.+++++ ++++
T Consensus 35 ~gTVv~~hGsP---GSH~DFkYi~~~l~~~~iR~I~iN~----PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~~~~i 107 (297)
T PF06342_consen 35 LGTVVAFHGSP---GSHNDFKYIRPPLDEAGIRFIGINY----PGFGFTPGYPDQQYTNEERQNFVNALLDELGIKGKLI 107 (297)
T ss_pred ceeEEEecCCC---CCccchhhhhhHHHHcCeEEEEeCC----CCCCCCCCCcccccChHHHHHHHHHHHHHcCCCCceE
Confidence 34899999988 5555577788899999999999999 99999875543 45666777777776665 5789
Q ss_pred EEEEChhHHHHHHHHHhcccccccccEEEEecccCch
Q 018555 169 LLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDR 205 (354)
Q Consensus 169 LvGhS~GG~~a~~~a~~p~~~~~~v~~lIl~~p~~~~ 205 (354)
.+|||.||-.|+.++... ++.+++|++|..-+
T Consensus 108 ~~gHSrGcenal~la~~~-----~~~g~~lin~~G~r 139 (297)
T PF06342_consen 108 FLGHSRGCENALQLAVTH-----PLHGLVLINPPGLR 139 (297)
T ss_pred EEEeccchHHHHHHHhcC-----ccceEEEecCCccc
Confidence 999999999999999873 35699999987644
No 100
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.25 E-value=1.2e-09 Score=87.66 Aligned_cols=183 Identities=15% Similarity=0.174 Sum_probs=118.2
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEccc---ccCCCCCCCC--ccCcHHHHHHHHHHHHhhCCCCc
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMT---SSYTGYGTSS--LQQDAMEIDQLISYLINKDNSEG 166 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R---~~~~G~G~S~--~~~~~~dl~~~i~~l~~~~~~~~ 166 (354)
...-+|||-||-|+. .++.....++..|+..||.|..|++. -...|+-+.. ......+....+..|.+.+.-.+
T Consensus 12 ~~~~tilLaHGAGas-mdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~gp 90 (213)
T COG3571 12 PAPVTILLAHGAGAS-MDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEGP 90 (213)
T ss_pred CCCEEEEEecCCCCC-CCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCCc
Confidence 445689999998854 57777899999999999999999972 0001211111 11122344444555555555568
Q ss_pred EEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhhcchhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcch
Q 018555 167 VVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLASSMIREGRGSELMPREADPCSPIT 245 (354)
Q Consensus 167 ~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (354)
.++-||||||-++-.++.. .. .|++|++++=...+.
T Consensus 91 Li~GGkSmGGR~aSmvade~~A----~i~~L~clgYPfhpp--------------------------------------- 127 (213)
T COG3571 91 LIIGGKSMGGRVASMVADELQA----PIDGLVCLGYPFHPP--------------------------------------- 127 (213)
T ss_pred eeeccccccchHHHHHHHhhcC----CcceEEEecCccCCC---------------------------------------
Confidence 9999999999999999887 55 699999865211110
Q ss_pred HHHHhhhhcccCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCCeEEEecCCCcc
Q 018555 246 AQRYHSLCAYMGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGGAEKVEIEHGIHS 325 (354)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~i~~agH~ 325 (354)
+..+-. -.+.|..++. |+||.+|+.|++-..+ .+..+ ..-+..++++++++.|.
T Consensus 128 -----------GKPe~~--------Rt~HL~gl~t-Ptli~qGtrD~fGtr~-----~Va~y-~ls~~iev~wl~~adHD 181 (213)
T COG3571 128 -----------GKPEQL--------RTEHLTGLKT-PTLITQGTRDEFGTRD-----EVAGY-ALSDPIEVVWLEDADHD 181 (213)
T ss_pred -----------CCcccc--------hhhhccCCCC-CeEEeecccccccCHH-----HHHhh-hcCCceEEEEeccCccc
Confidence 000000 0156677888 9999999999976544 22111 12356889999999999
Q ss_pred c-Ccc-------H---HHHHHHHHHHHHhh
Q 018555 326 L-SNR-------V---KEAVQAIIDFVKRE 344 (354)
Q Consensus 326 ~-~~~-------p---~~~~~~i~~Fl~~~ 344 (354)
+ -.. . ...++.|..|+.++
T Consensus 182 Lkp~k~vsgls~~~hL~~~A~~va~~~~~l 211 (213)
T COG3571 182 LKPRKLVSGLSTADHLKTLAEQVAGWARRL 211 (213)
T ss_pred cccccccccccHHHHHHHHHHHHHHHHhhc
Confidence 8 211 1 23466677776654
No 101
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.25 E-value=1.2e-10 Score=102.46 Aligned_cols=107 Identities=19% Similarity=0.249 Sum_probs=75.6
Q ss_pred CCcEEEEECCCCCCCCccccHHHHHHHHhh--------CCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhhC--
Q 018555 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDK--------ERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKD-- 162 (354)
Q Consensus 93 ~~p~vIliHG~~~~~~~~~~~~~la~~La~--------~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~~-- 162 (354)
.+.+||||||.+ ++...++.++..+.+ ..++++++|+......+......+..+-+.+.++.+.+.+
T Consensus 3 ~g~pVlFIhG~~---Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~q~~~~~~~i~~i~~~~~~ 79 (225)
T PF07819_consen 3 SGIPVLFIHGNA---GSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQRQAEFLAEAIKYILELYKS 79 (225)
T ss_pred CCCEEEEECcCC---CCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccccccHHHHHHHHHHHHHHHHHhhhh
Confidence 467999999988 677777778776632 2588999998533222222233445566777777776655
Q ss_pred ---CCCcEEEEEEChhHHHHHHHHHhcccccccccEEEEeccc
Q 018555 163 ---NSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPV 202 (354)
Q Consensus 163 ---~~~~~~LvGhS~GG~~a~~~a~~p~~~~~~v~~lIl~~p~ 202 (354)
+.++++||||||||.+|..++..+......|+.+|.++..
T Consensus 80 ~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tP 122 (225)
T PF07819_consen 80 NRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTP 122 (225)
T ss_pred ccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCC
Confidence 6789999999999999988876633333479999987643
No 102
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.24 E-value=3.4e-10 Score=109.81 Aligned_cols=107 Identities=9% Similarity=0.053 Sum_probs=77.5
Q ss_pred CCCcEEEEECCCCCCCCccccH-----HHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhhCCCCc
Q 018555 92 DYQQQVIFIGGLTDGFFATEYL-----EPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEG 166 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~-----~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~~~~~~ 166 (354)
..+.+||+++.+- .....+ +.+++.|.++||.|+.+|.|+-...+..-++++.++.+.++++.+.+..|.++
T Consensus 213 v~~~PLLIVPp~I---NK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r~~~ldDYv~~i~~Ald~V~~~tG~~~ 289 (560)
T TIGR01839 213 QHARPLLVVPPQI---NKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHREWGLSTYVDALKEAVDAVRAITGSRD 289 (560)
T ss_pred cCCCcEEEechhh---hhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhcCCCHHHHHHHHHHHHHHHHHhcCCCC
Confidence 3468999999977 222224 67899999999999999996411111122234445677788888888888899
Q ss_pred EEEEEEChhHHHHHH----HHHh-cccccccccEEEEecccCc
Q 018555 167 VVLLGHSTGCQDIVH----YMRA-NAACSRAVRAAIFQAPVSD 204 (354)
Q Consensus 167 ~~LvGhS~GG~~a~~----~a~~-p~~~~~~v~~lIl~~p~~~ 204 (354)
+.++||||||.++.. |+++ ++ .+|+.++++....+
T Consensus 290 vnl~GyC~GGtl~a~~~a~~aA~~~~---~~V~sltllatplD 329 (560)
T TIGR01839 290 LNLLGACAGGLTCAALVGHLQALGQL---RKVNSLTYLVSLLD 329 (560)
T ss_pred eeEEEECcchHHHHHHHHHHHhcCCC---CceeeEEeeecccc
Confidence 999999999999986 6666 41 27999998776554
No 103
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.23 E-value=5.9e-10 Score=101.62 Aligned_cols=213 Identities=18% Similarity=0.096 Sum_probs=129.0
Q ss_pred CCCcEEEEECCCCCCCCccccH--HHH-HHHHhhCCcEEEEEcccccCCCCCCCCc--------c----------CcHHH
Q 018555 92 DYQQQVIFIGGLTDGFFATEYL--EPL-AIALDKERWSLVQFLMTSSYTGYGTSSL--------Q----------QDAME 150 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~--~~l-a~~La~~g~~Via~D~R~~~~G~G~S~~--------~----------~~~~d 150 (354)
+.+|.+|.+.|.|| ..|| +.+ +..|.++|+..+.+.. +=||.-.. . ..+.+
T Consensus 90 ~~rp~~IhLagTGD----h~f~rR~~l~a~pLl~~gi~s~~le~----Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E 161 (348)
T PF09752_consen 90 PYRPVCIHLAGTGD----HGFWRRRRLMARPLLKEGIASLILEN----PYYGQRKPKDQRRSSLRNVSDLFVMGRATILE 161 (348)
T ss_pred CCCceEEEecCCCc----cchhhhhhhhhhHHHHcCcceEEEec----ccccccChhHhhcccccchhHHHHHHhHHHHH
Confidence 45889999999884 3444 334 8888888999999987 55554211 1 12567
Q ss_pred HHHHHHHHHhhCCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhh-----hcchhHHHHHHHHHHH
Q 018555 151 IDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYR-----ATLPETAAMIDLASSM 224 (354)
Q Consensus 151 l~~~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~-----~~~~~~~~~~~~~~~~ 224 (354)
...+++|+.++ |..++.|.|-||||.+|...+.. |. .|..+-++++.+..... ..--.+..+.+ +
T Consensus 162 ~~~Ll~Wl~~~-G~~~~g~~G~SmGG~~A~laa~~~p~----pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~---q- 232 (348)
T PF09752_consen 162 SRALLHWLERE-GYGPLGLTGISMGGHMAALAASNWPR----PVALVPCLSWSSASVVFTEGVLSNSINWDALEK---Q- 232 (348)
T ss_pred HHHHHHHHHhc-CCCceEEEEechhHhhHHhhhhcCCC----ceeEEEeecccCCCcchhhhhhhcCCCHHHHHH---H-
Confidence 88899999887 88999999999999999988887 77 77777676654432111 00000111111 0
Q ss_pred HhcCCCCCCCCCCCCC------------CCcchHHHHhhhhcccCCCccccCCCChHHHHHHhcCCCC----CcEEEEee
Q 018555 225 IREGRGSELMPREADP------------CSPITAQRYHSLCAYMGDDDMFSSDLSDDQLKQRLGHMAN----TPCQVIFS 288 (354)
Q Consensus 225 ~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~----~PvLvi~G 288 (354)
..+....+........ .......++.... .. ....+.+... ..+++|.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ea~~~m~~~----md-----------~~T~l~nf~~P~dp~~ii~V~A 297 (348)
T PF09752_consen 233 FEDTVYEEEISDIPAQNKSLPLDSMEERRRDREALRFMRGV----MD-----------SFTHLTNFPVPVDPSAIIFVAA 297 (348)
T ss_pred hcccchhhhhcccccCcccccchhhccccchHHHHHHHHHH----HH-----------hhccccccCCCCCCCcEEEEEe
Confidence 0000000000000000 0000000000000 00 0011111111 26789999
Q ss_pred CCCCCCCchhcHHHHHHHHHHHcCCCeEEEecCCCccc--CccHHHHHHHHHHHHH
Q 018555 289 MADEYVPEYVDKKALVERLCRAMGGAEKVEIEHGIHSL--SNRVKEAVQAIIDFVK 342 (354)
Q Consensus 289 ~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~--~~~p~~~~~~i~~Fl~ 342 (354)
++|.+||.. ....+.+..|++++..+++ ||.. +-+.+.|.++|.+-++
T Consensus 298 ~~DaYVPr~-----~v~~Lq~~WPGsEvR~l~g-GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 298 KNDAYVPRH-----GVLSLQEIWPGSEVRYLPG-GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred cCceEechh-----hcchHHHhCCCCeEEEecC-CcEEEeeechHHHHHHHHHHhh
Confidence 999999987 5668899999999999977 9998 5788999999988765
No 104
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.21 E-value=4.2e-10 Score=92.06 Aligned_cols=171 Identities=21% Similarity=0.245 Sum_probs=105.1
Q ss_pred cEEEEECCCCCCCCccccHH-HHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhhCCCCcEEEEEEC
Q 018555 95 QQVIFIGGLTDGFFATEYLE-PLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLGHS 173 (354)
Q Consensus 95 p~vIliHG~~~~~~~~~~~~-~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~~~~~~~~LvGhS 173 (354)
+.+|++||++++ ....|. .+-+.|.. +-.+++ .-+ +.+...+-++++.+++... .++++||+||
T Consensus 3 ~~~lIVpG~~~S--g~~HWq~~we~~l~~----a~rveq----~~w---~~P~~~dWi~~l~~~v~a~--~~~~vlVAHS 67 (181)
T COG3545 3 TDVLIVPGYGGS--GPNHWQSRWESALPN----ARRVEQ----DDW---EAPVLDDWIARLEKEVNAA--EGPVVLVAHS 67 (181)
T ss_pred ceEEEecCCCCC--ChhHHHHHHHhhCcc----chhccc----CCC---CCCCHHHHHHHHHHHHhcc--CCCeEEEEec
Confidence 468999999853 233344 33333432 333333 222 2333333344444444332 3569999999
Q ss_pred hhHHHHHHHHHh-cccccccccEEEEecccCchHhhhcchhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcchHHHHhhh
Q 018555 174 TGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLASSMIREGRGSELMPREADPCSPITAQRYHSL 252 (354)
Q Consensus 174 ~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (354)
+||.++++++.. .. .|.|++|++|..-....... . .+.. +
T Consensus 68 LGc~~v~h~~~~~~~----~V~GalLVAppd~~~~~~~~----------~---------~~~t-------------f--- 108 (181)
T COG3545 68 LGCATVAHWAEHIQR----QVAGALLVAPPDVSRPEIRP----------K---------HLMT-------------F--- 108 (181)
T ss_pred ccHHHHHHHHHhhhh----ccceEEEecCCCccccccch----------h---------hccc-------------c---
Confidence 999999999988 55 89999999985422100000 0 0000 0
Q ss_pred hcccCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCCeEEEecCCCccc----Cc
Q 018555 253 CAYMGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGGAEKVEIEHGIHSL----SN 328 (354)
Q Consensus 253 ~~~~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~----~~ 328 (354)
+. .....+.. |.++|...+|++++.+ ..+.+++..+ +.++.+.++||.. ++
T Consensus 109 -------~~-----------~p~~~lpf-ps~vvaSrnDp~~~~~-----~a~~~a~~wg-s~lv~~g~~GHiN~~sG~g 163 (181)
T COG3545 109 -------DP-----------IPREPLPF-PSVVVASRNDPYVSYE-----HAEDLANAWG-SALVDVGEGGHINAESGFG 163 (181)
T ss_pred -------CC-----------CccccCCC-ceeEEEecCCCCCCHH-----HHHHHHHhcc-HhheecccccccchhhcCC
Confidence 00 01123445 9999999999999988 7778888775 6789999999998 23
Q ss_pred cHHHHHHHHHHHHHhh
Q 018555 329 RVKEAVQAIIDFVKRE 344 (354)
Q Consensus 329 ~p~~~~~~i~~Fl~~~ 344 (354)
.-.+....+.+|+.+.
T Consensus 164 ~wpeg~~~l~~~~s~~ 179 (181)
T COG3545 164 PWPEGYALLAQLLSRA 179 (181)
T ss_pred CcHHHHHHHHHHhhhh
Confidence 4456677777776553
No 105
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.19 E-value=7.3e-10 Score=97.69 Aligned_cols=101 Identities=16% Similarity=0.127 Sum_probs=73.4
Q ss_pred cEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCC-CccCcHHHHH-HHHHHHHhhCCCCcEEEEEE
Q 018555 95 QQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTS-SLQQDAMEID-QLISYLINKDNSEGVVLLGH 172 (354)
Q Consensus 95 p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S-~~~~~~~dl~-~~i~~l~~~~~~~~~~LvGh 172 (354)
++|+|+|+.+ ++...|.+|++.|....+.|+.+++ +|.+.. .....+++++ ..++.+.+.....+++|+||
T Consensus 1 ~~lf~~p~~g---G~~~~y~~la~~l~~~~~~v~~i~~----~~~~~~~~~~~si~~la~~y~~~I~~~~~~gp~~L~G~ 73 (229)
T PF00975_consen 1 RPLFCFPPAG---GSASSYRPLARALPDDVIGVYGIEY----PGRGDDEPPPDSIEELASRYAEAIRARQPEGPYVLAGW 73 (229)
T ss_dssp -EEEEESSTT---CSGGGGHHHHHHHTTTEEEEEEECS----TTSCTTSHEESSHHHHHHHHHHHHHHHTSSSSEEEEEE
T ss_pred CeEEEEcCCc---cCHHHHHHHHHhCCCCeEEEEEEec----CCCCCCCCCCCCHHHHHHHHHHHhhhhCCCCCeeehcc
Confidence 4799999988 6788899999999962399999999 787622 2334444444 34555555444459999999
Q ss_pred ChhHHHHHHHHHhcccccccccEEEEeccc
Q 018555 173 STGCQDIVHYMRANAACSRAVRAAIFQAPV 202 (354)
Q Consensus 173 S~GG~~a~~~a~~p~~~~~~v~~lIl~~p~ 202 (354)
|+||.+|++.|.+-+.....|..|++++..
T Consensus 74 S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~ 103 (229)
T PF00975_consen 74 SFGGILAFEMARQLEEAGEEVSRLILIDSP 103 (229)
T ss_dssp THHHHHHHHHHHHHHHTT-SESEEEEESCS
T ss_pred CccHHHHHHHHHHHHHhhhccCceEEecCC
Confidence 999999999998711123368999998843
No 106
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.16 E-value=1.7e-09 Score=96.32 Aligned_cols=202 Identities=17% Similarity=0.199 Sum_probs=112.0
Q ss_pred CCcEEEEECCCCCCCCccccHHHHHHHHh-hCCc--EEEEEcccccCCCC----CCCC-------------------ccC
Q 018555 93 YQQQVIFIGGLTDGFFATEYLEPLAIALD-KERW--SLVQFLMTSSYTGY----GTSS-------------------LQQ 146 (354)
Q Consensus 93 ~~p~vIliHG~~~~~~~~~~~~~la~~La-~~g~--~Via~D~R~~~~G~----G~S~-------------------~~~ 146 (354)
...|.|||||++ ++...+..+++.+. +.|. .++..+-.. .|. |.-. ...
T Consensus 10 ~~tPTifihG~~---gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~--~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~ 84 (255)
T PF06028_consen 10 STTPTIFIHGYG---GTANSFNHMINRLENKQGVAQKVLTVTVSK--NGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKK 84 (255)
T ss_dssp S-EEEEEE--TT---GGCCCCHHHHHHHHHCSTS-S-EEEEEEET--TSEEEEES---TT-SS-EEEEEESSTT-CHHHH
T ss_pred CCCcEEEECCCC---CChhHHHHHHHHHHhhcCCCceEEEEEECC--CCeEEEeeecCCCCCCCEEEEEecCCCcCCHHH
Confidence 456899999999 77777899999997 6554 344443310 121 1110 112
Q ss_pred cHHHHHHHHHHHHhhCCCCcEEEEEEChhHHHHHHHHHh--cccccccccEEEEecccCchHhhhcchhHHHHHHHHHHH
Q 018555 147 DAMEIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRA--NAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLASSM 224 (354)
Q Consensus 147 ~~~dl~~~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~--p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~~~ 224 (354)
....+..++.+|.++++++++-+|||||||..++.|+.. .+...+.+.++|.++...+.........
T Consensus 85 qa~wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~----------- 153 (255)
T PF06028_consen 85 QAKWLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQ----------- 153 (255)
T ss_dssp HHHHHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-T-----------
T ss_pred HHHHHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccc-----------
Confidence 356788899999999999999999999999999999987 2333457999999875443211100000
Q ss_pred HhcCCCCCCCCCCCCCCCcc-hHHHHhhhhcccCCCccccCCCChHHHHHHhcCCCCCcEEEEeeC------CCCCCCch
Q 018555 225 IREGRGSELMPREADPCSPI-TAQRYHSLCAYMGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSM------ADEYVPEY 297 (354)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~------~D~~vp~~ 297 (354)
....+.. ..|. ....+..+.... +..++ -.+ .+|-|.|. .|..||..
T Consensus 154 ----~~~~~~~-----~gp~~~~~~y~~l~~~~---------------~~~~p-~~i-~VLnI~G~~~~g~~sDG~V~~~ 207 (255)
T PF06028_consen 154 ----NQNDLNK-----NGPKSMTPMYQDLLKNR---------------RKNFP-KNI-QVLNIYGDLEDGSNSDGIVPNA 207 (255)
T ss_dssp ----TTT-CST-----T-BSS--HHHHHHHHTH---------------GGGST-TT--EEEEEEEESBTTCSBTSSSBHH
T ss_pred ----hhhhhcc-----cCCcccCHHHHHHHHHH---------------HhhCC-CCe-EEEEEecccCCCCCCCeEEeHH
Confidence 0000000 0000 011111110000 01111 123 89999998 68889876
Q ss_pred hcHHHHHHHHHHHcCC----CeEEEecC--CCcccCccHHHHHHHHHHHH
Q 018555 298 VDKKALVERLCRAMGG----AEKVEIEH--GIHSLSNRVKEAVQAIIDFV 341 (354)
Q Consensus 298 ~~~~~~~~~~~~~~~~----~~~~~i~~--agH~~~~~p~~~~~~i~~Fl 341 (354)
-++.++..+.+ .+-.+|.| |.|.-+-+..++.+.|.+||
T Consensus 208 -----Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~~V~~~I~~FL 252 (255)
T PF06028_consen 208 -----SSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENPQVDKLIIQFL 252 (255)
T ss_dssp -----HHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCHHHHHHHHHHH
T ss_pred -----HHHHHHHHhhcccCceEEEEEECCCCccccCCCCHHHHHHHHHHh
Confidence 44445544433 33445654 78998545568889999998
No 107
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.14 E-value=2.2e-09 Score=101.01 Aligned_cols=109 Identities=17% Similarity=0.263 Sum_probs=83.4
Q ss_pred CCCcEEEEECCCCCCCCccccH------HHHHHHHhhCCcEEEEEcccccCCCCC-----CCC--------ccC-cHHHH
Q 018555 92 DYQQQVIFIGGLTDGFFATEYL------EPLAIALDKERWSLVQFLMTSSYTGYG-----TSS--------LQQ-DAMEI 151 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~------~~la~~La~~g~~Via~D~R~~~~G~G-----~S~--------~~~-~~~dl 151 (354)
+++|+|+|.||+. .++..| ..++-.|+++||.|+.-+.||..-... .++ ..+ ..+|+
T Consensus 71 ~~rp~Vll~HGLl---~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDL 147 (403)
T KOG2624|consen 71 KKRPVVLLQHGLL---ASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDL 147 (403)
T ss_pred CCCCcEEEeeccc---cccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcccCCcCCcceeecchhhhhhcCH
Confidence 7789999999998 455555 356778999999999999975221111 110 111 25799
Q ss_pred HHHHHHHHhhCCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCc
Q 018555 152 DQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSD 204 (354)
Q Consensus 152 ~~~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~ 204 (354)
.+.|+++.+.-+.++++.||||.|+.+....+.. |+ ...+|+.+++++|+..
T Consensus 148 PA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~-~~~kI~~~~aLAP~~~ 200 (403)
T KOG2624|consen 148 PAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPE-YNKKIKSFIALAPAAF 200 (403)
T ss_pred HHHHHHHHHhccccceEEEEEEccchhheehhcccch-hhhhhheeeeecchhh
Confidence 9999999998888999999999999999888877 53 3358999999999763
No 108
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.13 E-value=2.4e-09 Score=109.72 Aligned_cols=209 Identities=11% Similarity=0.043 Sum_probs=118.3
Q ss_pred HHHHHhhCCcEEEEEcccccCCCCCCCCc------cCcHHHHHHHHHHHHhhC----------------CCCcEEEEEEC
Q 018555 116 LAIALDKERWSLVQFLMTSSYTGYGTSSL------QQDAMEIDQLISYLINKD----------------NSEGVVLLGHS 173 (354)
Q Consensus 116 la~~La~~g~~Via~D~R~~~~G~G~S~~------~~~~~dl~~~i~~l~~~~----------------~~~~~~LvGhS 173 (354)
+.+.|.++||.|+.+|.| |.|.|.- ....+|..++|+||..+. ...+|.++|.|
T Consensus 271 ~~~~~~~rGYaVV~~D~R----Gtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~S 346 (767)
T PRK05371 271 LNDYFLPRGFAVVYVSGI----GTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKS 346 (767)
T ss_pred HHHHHHhCCeEEEEEcCC----CCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEc
Confidence 557788889999999995 6666542 345689999999998421 14699999999
Q ss_pred hhHHHHHHHHHh-cccccccccEEEEecccCchHhhhcc------h-hH-HHHHHHHHHHHhcCCCCCCCCCCCCCCCcc
Q 018555 174 TGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRATL------P-ET-AAMIDLASSMIREGRGSELMPREADPCSPI 244 (354)
Q Consensus 174 ~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~~~------~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (354)
|||.+++.+|.. ++ .++++|-.+++.+....... + .. ..-.......+.... ..........+
T Consensus 347 Y~G~~~~~aAa~~pp----~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~---~~~~~~~~~~~- 418 (767)
T PRK05371 347 YLGTLPNAVATTGVE----GLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRN---LLAGDYLRHNE- 418 (767)
T ss_pred HHHHHHHHHHhhCCC----cceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhcc---cCcchhhcchH-
Confidence 999999999887 77 89999998887764321100 0 00 000000000010000 00000000000
Q ss_pred hHHH----Hhhhhcc--cCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCCeEEE
Q 018555 245 TAQR----YHSLCAY--MGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGGAEKVE 318 (354)
Q Consensus 245 ~~~~----~~~~~~~--~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~ 318 (354)
.... +...... ....++|.. ......+.+|++ |+|+|||.+|..++... ..++.+.+.+...+.++++
T Consensus 419 ~~~~~~~~~~~~~~~~~~~y~~fW~~----rn~~~~~~kIkv-PvLlIhGw~D~~V~~~~-s~~ly~aL~~~g~pkkL~l 492 (767)
T PRK05371 419 ACEKLLAELTAAQDRKTGDYNDFWDD----RNYLKDADKIKA-SVLVVHGLNDWNVKPKQ-VYQWWDALPENGVPKKLFL 492 (767)
T ss_pred HHHHHHhhhhhhhhhcCCCccHHHHh----CCHhhHhhCCCC-CEEEEeeCCCCCCChHH-HHHHHHHHHhcCCCeEEEE
Confidence 0000 0000000 011122211 122356778999 99999999999998651 2224445544333455654
Q ss_pred ecCCCccc-C-ccHHHHHHHHHHHHHh
Q 018555 319 IEHGIHSL-S-NRVKEAVQAIIDFVKR 343 (354)
Q Consensus 319 i~~agH~~-~-~~p~~~~~~i~~Fl~~ 343 (354)
...+|.. . ..+.++.+.+.+|+..
T Consensus 493 -~~g~H~~~~~~~~~d~~e~~~~Wfd~ 518 (767)
T PRK05371 493 -HQGGHVYPNNWQSIDFRDTMNAWFTH 518 (767)
T ss_pred -eCCCccCCCchhHHHHHHHHHHHHHh
Confidence 4567865 2 3456778888888865
No 109
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.13 E-value=2.1e-10 Score=99.41 Aligned_cols=107 Identities=19% Similarity=0.239 Sum_probs=86.1
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHh----------h
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLIN----------K 161 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~----------~ 161 (354)
+.-|+|+|+||+. ....++.++...++.+||-|+++++- ...+ .+..+++++.+++++||.+ +
T Consensus 44 G~yPVilF~HG~~---l~ns~Ys~lL~HIASHGfIVVAPQl~---~~~~-p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~ 116 (307)
T PF07224_consen 44 GTYPVILFLHGFN---LYNSFYSQLLAHIASHGFIVVAPQLY---TLFP-PDGQDEIKSAASVINWLPEGLQHVLPENVE 116 (307)
T ss_pred CCccEEEEeechh---hhhHHHHHHHHHHhhcCeEEEechhh---cccC-CCchHHHHHHHHHHHHHHhhhhhhCCCCcc
Confidence 5569999999999 77888999999999999999999993 2222 3455667888899999976 2
Q ss_pred CCCCcEEEEEEChhHHHHHHHHHhcccccccccEEEEecccCchH
Q 018555 162 DNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDRE 206 (354)
Q Consensus 162 ~~~~~~~LvGhS~GG~~a~~~a~~p~~~~~~v~~lIl~~p~~~~~ 206 (354)
.+..++.|+|||.||-+|..+|.... ....+.+||.++|+....
T Consensus 117 ~nl~klal~GHSrGGktAFAlALg~a-~~lkfsaLIGiDPV~G~~ 160 (307)
T PF07224_consen 117 ANLSKLALSGHSRGGKTAFALALGYA-TSLKFSALIGIDPVAGTS 160 (307)
T ss_pred cccceEEEeecCCccHHHHHHHhccc-ccCchhheecccccCCCC
Confidence 35679999999999999999998721 334789999999987653
No 110
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.13 E-value=1.9e-10 Score=115.99 Aligned_cols=85 Identities=22% Similarity=0.159 Sum_probs=67.9
Q ss_pred CcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCcc----------------------------
Q 018555 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQ---------------------------- 145 (354)
Q Consensus 94 ~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~---------------------------- 145 (354)
.|+|||+||++ .+...|..+++.|+++||+|+++|+ +|||.+...
T Consensus 449 ~P~VVllHG~~---g~~~~~~~lA~~La~~Gy~VIaiDl----pGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn 521 (792)
T TIGR03502 449 WPVVIYQHGIT---GAKENALAFAGTLAAAGVATIAIDH----PLHGARSFDANASGVNATNANVLAYMNLASLLVARDN 521 (792)
T ss_pred CcEEEEeCCCC---CCHHHHHHHHHHHHhCCcEEEEeCC----CCCCccccccccccccccccCccceeccccccccccC
Confidence 46999999999 7778899999999988999999999 799988432
Q ss_pred --CcHHHHHHHHHHHH------hh------CCCCcEEEEEEChhHHHHHHHHHh
Q 018555 146 --QDAMEIDQLISYLI------NK------DNSEGVVLLGHSTGCQDIVHYMRA 185 (354)
Q Consensus 146 --~~~~dl~~~i~~l~------~~------~~~~~~~LvGhS~GG~~a~~~a~~ 185 (354)
+.+.|+..+...+. +. ++..+++++||||||.+++.++..
T Consensus 522 ~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 522 LRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 01345555666655 21 445699999999999999999986
No 111
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.11 E-value=8.4e-10 Score=104.32 Aligned_cols=102 Identities=19% Similarity=0.248 Sum_probs=63.3
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCC----------------------------C
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTS----------------------------S 143 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S----------------------------~ 143 (354)
++-|+|||.||++ ++...+..++..||.+||-|+++|+|. |-+-. .
T Consensus 98 ~~~PvvIFSHGlg---g~R~~yS~~~~eLAS~GyVV~aieHrD---gSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (379)
T PF03403_consen 98 GKFPVVIFSHGLG---GSRTSYSAICGELASHGYVVAAIEHRD---GSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRD 171 (379)
T ss_dssp S-EEEEEEE--TT-----TTTTHHHHHHHHHTT-EEEEE---S---S-SSEEEE-SSHHHHHHT---------EEEE---
T ss_pred CCCCEEEEeCCCC---cchhhHHHHHHHHHhCCeEEEEeccCC---CceeEEEeccCCCccccccccccccccceecccc
Confidence 4569999999999 777788999999999999999999982 21100 0
Q ss_pred c--cC-----------cHHHHHHHHHHHHh----------------------hCCCCcEEEEEEChhHHHHHHHHHhccc
Q 018555 144 L--QQ-----------DAMEIDQLISYLIN----------------------KDNSEGVVLLGHSTGCQDIVHYMRANAA 188 (354)
Q Consensus 144 ~--~~-----------~~~dl~~~i~~l~~----------------------~~~~~~~~LvGhS~GG~~a~~~a~~p~~ 188 (354)
. +. ...|+..+++.|.+ +++..++.++|||+||..++..+.+..
T Consensus 172 ~~~~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d~- 250 (379)
T PF03403_consen 172 FDPEEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQDT- 250 (379)
T ss_dssp --GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH-T-
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhcc-
Confidence 0 00 02456666666643 233568999999999999998887755
Q ss_pred ccccccEEEEecccC
Q 018555 189 CSRAVRAAIFQAPVS 203 (354)
Q Consensus 189 ~~~~v~~lIl~~p~~ 203 (354)
+++..|+++|..
T Consensus 251 ---r~~~~I~LD~W~ 262 (379)
T PF03403_consen 251 ---RFKAGILLDPWM 262 (379)
T ss_dssp ---T--EEEEES---
T ss_pred ---CcceEEEeCCcc
Confidence 899999888743
No 112
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.10 E-value=4e-09 Score=95.24 Aligned_cols=103 Identities=19% Similarity=0.328 Sum_probs=76.4
Q ss_pred CcEEEEECCCCCCCCccccHHHHHHHHhhC---CcEEEEEcccccCCCCCCCCcc------Cc----HHHHHHHHHHHHh
Q 018555 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKE---RWSLVQFLMTSSYTGYGTSSLQ------QD----AMEIDQLISYLIN 160 (354)
Q Consensus 94 ~p~vIliHG~~~~~~~~~~~~~la~~La~~---g~~Via~D~R~~~~G~G~S~~~------~~----~~dl~~~i~~l~~ 160 (354)
+..||||+|.+ +-..|+....+.|.++ .|.|++..+ .||...... .. .++++..++.+.+
T Consensus 2 ~~li~~IPGNP---Glv~fY~~Fl~~L~~~l~~~~~i~~ish----~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~ 74 (266)
T PF10230_consen 2 RPLIVFIPGNP---GLVEFYEEFLSALYEKLNPQFEILGISH----AGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKE 74 (266)
T ss_pred cEEEEEECCCC---ChHHHHHHHHHHHHHhCCCCCeeEEecC----CCCcCCcccccccCCCCccCHHHHHHHHHHHHHH
Confidence 56899999999 7888999998888743 899999999 788665433 11 2334433444333
Q ss_pred ---hC--CCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCc
Q 018555 161 ---KD--NSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSD 204 (354)
Q Consensus 161 ---~~--~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~ 204 (354)
.. ...+++|+|||.|++++++.+.+ + ....+|.+++++-|...
T Consensus 75 ~~~~~~~~~~~liLiGHSIGayi~levl~r~~-~~~~~V~~~~lLfPTi~ 123 (266)
T PF10230_consen 75 LIPQKNKPNVKLILIGHSIGAYIALEVLKRLP-DLKFRVKKVILLFPTIE 123 (266)
T ss_pred HhhhhcCCCCcEEEEeCcHHHHHHHHHHHhcc-ccCCceeEEEEeCCccc
Confidence 32 45789999999999999999998 6 12338999999988653
No 113
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.10 E-value=4.3e-09 Score=90.36 Aligned_cols=203 Identities=15% Similarity=0.167 Sum_probs=107.3
Q ss_pred CCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCc-------cCcHHHHHHHHHHHHhhCCCC
Q 018555 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSL-------QQDAMEIDQLISYLINKDNSE 165 (354)
Q Consensus 93 ~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~-------~~~~~dl~~~i~~l~~~~~~~ 165 (354)
..++||+-.||+ .....+..+|.+|+..||+|+.||.- ..-|.|+- ....+++..+++||. ..|..
T Consensus 29 ~~~tiliA~Gf~---rrmdh~agLA~YL~~NGFhViRyDsl---~HvGlSsG~I~eftms~g~~sL~~V~dwl~-~~g~~ 101 (294)
T PF02273_consen 29 RNNTILIAPGFA---RRMDHFAGLAEYLSANGFHVIRYDSL---NHVGLSSGDINEFTMSIGKASLLTVIDWLA-TRGIR 101 (294)
T ss_dssp -S-EEEEE-TT----GGGGGGHHHHHHHHTTT--EEEE------B-------------HHHHHHHHHHHHHHHH-HTT--
T ss_pred cCCeEEEecchh---HHHHHHHHHHHHHhhCCeEEEecccc---ccccCCCCChhhcchHHhHHHHHHHHHHHH-hcCCC
Confidence 458999999999 77778999999999999999999983 23366652 234678999999998 56888
Q ss_pred cEEEEEEChhHHHHHHHHHhcccccccccEEEEecccCchHhhhcchhHHHHHHHHH--HHHhcCCCCCCCCCCCC-CCC
Q 018555 166 GVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLAS--SMIREGRGSELMPREAD-PCS 242 (354)
Q Consensus 166 ~~~LvGhS~GG~~a~~~a~~p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~ 242 (354)
++-|+.-|+-|-+|+..+.+. .+.-||+.-.+.+... -++.+. .++.. +.+-+|.... ...
T Consensus 102 ~~GLIAaSLSaRIAy~Va~~i-----~lsfLitaVGVVnlr~---------TLe~al~~Dyl~~--~i~~lp~dldfeGh 165 (294)
T PF02273_consen 102 RIGLIAASLSARIAYEVAADI-----NLSFLITAVGVVNLRD---------TLEKALGYDYLQL--PIEQLPEDLDFEGH 165 (294)
T ss_dssp -EEEEEETTHHHHHHHHTTTS-------SEEEEES--S-HHH---------HHHHHHSS-GGGS---GGG--SEEEETTE
T ss_pred cchhhhhhhhHHHHHHHhhcc-----CcceEEEEeeeeeHHH---------HHHHHhccchhhc--chhhCCCccccccc
Confidence 999999999999999998763 4666776655554321 111110 11110 0000111000 011
Q ss_pred cchHHHHhhhhcccCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHc--CCCeEEEec
Q 018555 243 PITAQRYHSLCAYMGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAM--GGAEKVEIE 320 (354)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~--~~~~~~~i~ 320 (354)
......|..-+...+-. ..+.....+..+.+ |++.+++++|..|... -+.++...+ +..+++.++
T Consensus 166 ~l~~~vFv~dc~e~~w~-------~l~ST~~~~k~l~i-P~iaF~A~~D~WV~q~-----eV~~~~~~~~s~~~klysl~ 232 (294)
T PF02273_consen 166 NLGAEVFVTDCFEHGWD-------DLDSTINDMKRLSI-PFIAFTANDDDWVKQS-----EVEELLDNINSNKCKLYSLP 232 (294)
T ss_dssp EEEHHHHHHHHHHTT-S-------SHHHHHHHHTT--S--EEEEEETT-TTS-HH-----HHHHHHTT-TT--EEEEEET
T ss_pred ccchHHHHHHHHHcCCc-------cchhHHHHHhhCCC-CEEEEEeCCCccccHH-----HHHHHHHhcCCCceeEEEec
Confidence 12233343322221111 22344578889999 9999999999988765 344444433 346788899
Q ss_pred CCCcccCccHH
Q 018555 321 HGIHSLSNRVK 331 (354)
Q Consensus 321 ~agH~~~~~p~ 331 (354)
|+.|.+-+++-
T Consensus 233 Gs~HdL~enl~ 243 (294)
T PF02273_consen 233 GSSHDLGENLV 243 (294)
T ss_dssp T-SS-TTSSHH
T ss_pred CccchhhhChH
Confidence 99999976653
No 114
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.09 E-value=9.7e-09 Score=94.75 Aligned_cols=227 Identities=15% Similarity=0.158 Sum_probs=133.0
Q ss_pred CCCcEEEEECCCCCCCC--ccccHHHHHHHH-hhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHh------hC
Q 018555 92 DYQQQVIFIGGLTDGFF--ATEYLEPLAIAL-DKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLIN------KD 162 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~--~~~~~~~la~~L-a~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~------~~ 162 (354)
...|.||++||.|--.+ ....+..+...+ .+.+..|+.+||| =--+..+|...+|-..++.|+.+ ..
T Consensus 88 ~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYR----LAPEh~~Pa~y~D~~~Al~w~~~~~~~~~~~ 163 (336)
T KOG1515|consen 88 TKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYR----LAPEHPFPAAYDDGWAALKWVLKNSWLKLGA 163 (336)
T ss_pred cCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcc----cCCCCCCCccchHHHHHHHHHHHhHHHHhCC
Confidence 46799999999764333 355577788877 4579999999997 22333456666776666666655 35
Q ss_pred CCCcEEEEEEChhHHHHHHHHHh-ccc--ccccccEEEEecccCchHhhhcchhHHHHHHHHHHHHhcCCCCCCCCCCCC
Q 018555 163 NSEGVVLLGHSTGCQDIVHYMRA-NAA--CSRAVRAAIFQAPVSDREYRATLPETAAMIDLASSMIREGRGSELMPREAD 239 (354)
Q Consensus 163 ~~~~~~LvGhS~GG~~a~~~a~~-p~~--~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (354)
+.++++|+|-|-||.+|..++.+ -+. ...++++.||+-|+........... .+. .+.. .
T Consensus 164 D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~-~~~--------~~~~---------~ 225 (336)
T KOG1515|consen 164 DPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEK-QQN--------LNGS---------P 225 (336)
T ss_pred CcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHH-HHh--------hcCC---------c
Confidence 67899999999999999999887 322 3568999999998765432111000 000 0000 0
Q ss_pred CCCcchHHHHhhhhcccCC---CccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCCeE
Q 018555 240 PCSPITAQRYHSLCAYMGD---DDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGGAEK 316 (354)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~ 316 (354)
.........++.+..+.+. ++-+.+.... .......-..+.|+||+.++.|.+.... -...+++++..-..++
T Consensus 226 ~~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~-~~~~d~~~~~lp~tlv~~ag~D~L~D~~---~~Y~~~Lkk~Gv~v~~ 301 (336)
T KOG1515|consen 226 ELARPKIDKWWRLLLPNGKTDLDHPFINPVGN-SLAKDLSGLGLPPTLVVVAGYDVLRDEG---LAYAEKLKKAGVEVTL 301 (336)
T ss_pred chhHHHHHHHHHHhCCCCCCCcCCcccccccc-ccccCccccCCCceEEEEeCchhhhhhh---HHHHHHHHHcCCeEEE
Confidence 0000011111111111110 0001111110 0001112223337999999999877433 3366777776656677
Q ss_pred EEecCCCccc-C-c----cHHHHHHHHHHHHHhh
Q 018555 317 VEIEHGIHSL-S-N----RVKEAVQAIIDFVKRE 344 (354)
Q Consensus 317 ~~i~~agH~~-~-~----~p~~~~~~i~~Fl~~~ 344 (354)
+.++++.|.. . . ...++.+.+.+|+++.
T Consensus 302 ~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 302 IHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred EEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 7899999998 2 2 2346778888888753
No 115
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.09 E-value=3.1e-09 Score=90.18 Aligned_cols=169 Identities=18% Similarity=0.185 Sum_probs=115.4
Q ss_pred CcEEEEECC-CCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCC---------------CccCcHHHHHHHHHH
Q 018555 94 QQQVIFIGG-LTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTS---------------SLQQDAMEIDQLISY 157 (354)
Q Consensus 94 ~p~vIliHG-~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S---------------~~~~~~~dl~~~i~~ 157 (354)
+.+||++-- || .....-+..|..++.+||.|+.||+- .|---+ +.+....++..++++
T Consensus 39 ~~~li~i~DvfG---~~~~n~r~~Adk~A~~Gy~v~vPD~~---~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~ 112 (242)
T KOG3043|consen 39 KKVLIVIQDVFG---FQFPNTREGADKVALNGYTVLVPDFF---RGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKW 112 (242)
T ss_pred CeEEEEEEeeec---cccHHHHHHHHHHhcCCcEEEcchhh---cCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHH
Confidence 346666665 44 34444678899999999999999983 231111 122346799999999
Q ss_pred HHhhCCCCcEEEEEEChhHHHHHHHHHhcccccccccEEEEecccCchHhhhcchhHHHHHHHHHHHHhcCCCCCCCCCC
Q 018555 158 LINKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLASSMIREGRGSELMPRE 237 (354)
Q Consensus 158 l~~~~~~~~~~LvGhS~GG~~a~~~a~~p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (354)
|+.+...+++-++|..|||.+++.+..+-. .+.+.+..-|...
T Consensus 113 lk~~g~~kkIGv~GfCwGak~vv~~~~~~~----~f~a~v~~hps~~--------------------------------- 155 (242)
T KOG3043|consen 113 LKNHGDSKKIGVVGFCWGAKVVVTLSAKDP----EFDAGVSFHPSFV--------------------------------- 155 (242)
T ss_pred HHHcCCcceeeEEEEeecceEEEEeeccch----hheeeeEecCCcC---------------------------------
Confidence 997776899999999999999988876621 4555554222100
Q ss_pred CCCCCcchHHHHhhhhcccCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHc---CC-
Q 018555 238 ADPCSPITAQRYHSLCAYMGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAM---GG- 313 (354)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~---~~- 313 (354)
+ .+...++++ |+|++.|+.|.++|+. ....+.+.+ +.
T Consensus 156 ----------------------d-----------~~D~~~vk~-Pilfl~ae~D~~~p~~-----~v~~~ee~lk~~~~~ 196 (242)
T KOG3043|consen 156 ----------------------D-----------SADIANVKA-PILFLFAELDEDVPPK-----DVKAWEEKLKENPAV 196 (242)
T ss_pred ----------------------C-----------hhHHhcCCC-CEEEEeecccccCCHH-----HHHHHHHHHhcCccc
Confidence 0 044556888 9999999999999987 444444333 22
Q ss_pred -CeEEEecCCCcccCc------cH------HHHHHHHHHHHHhh
Q 018555 314 -AEKVEIEHGIHSLSN------RV------KEAVQAIIDFVKRE 344 (354)
Q Consensus 314 -~~~~~i~~agH~~~~------~p------~~~~~~i~~Fl~~~ 344 (354)
.++.++++.+|..+. .| |+..+.++.|++..
T Consensus 197 ~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y 240 (242)
T KOG3043|consen 197 GSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHY 240 (242)
T ss_pred ceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHh
Confidence 468999999999831 23 35667777777653
No 116
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.07 E-value=6.4e-10 Score=92.82 Aligned_cols=184 Identities=12% Similarity=0.042 Sum_probs=112.8
Q ss_pred CCCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCC--CccCcHHHHHHHHHHHHhhC-CCCcE
Q 018555 91 GDYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTS--SLQQDAMEIDQLISYLINKD-NSEGV 167 (354)
Q Consensus 91 ~~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S--~~~~~~~dl~~~i~~l~~~~-~~~~~ 167 (354)
....+..|||||.-.-.++...=..++..+.+.||+|...++ +...- +..+.+.+...-++++.+.. ..+.+
T Consensus 64 ~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY-----~l~~q~htL~qt~~~~~~gv~filk~~~n~k~l 138 (270)
T KOG4627|consen 64 TNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGY-----NLCPQVHTLEQTMTQFTHGVNFILKYTENTKVL 138 (270)
T ss_pred CCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEecc-----CcCcccccHHHHHHHHHHHHHHHHHhcccceeE
Confidence 456789999999332222333323345555567999999977 22211 24455667777777777643 34668
Q ss_pred EEEEEChhHHHHHHHHHhcccccccccEEEEecccCchHhhhcchhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcchHH
Q 018555 168 VLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLASSMIREGRGSELMPREADPCSPITAQ 247 (354)
Q Consensus 168 ~LvGhS~GG~~a~~~a~~p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (354)
++-|||.|+.+|+.+..+ ...++|.+++|.+.+...+.... ......+ .+..+
T Consensus 139 ~~gGHSaGAHLa~qav~R--~r~prI~gl~l~~GvY~l~EL~~----------------te~g~dl---------gLt~~ 191 (270)
T KOG4627|consen 139 TFGGHSAGAHLAAQAVMR--QRSPRIWGLILLCGVYDLRELSN----------------TESGNDL---------GLTER 191 (270)
T ss_pred EEcccchHHHHHHHHHHH--hcCchHHHHHHHhhHhhHHHHhC----------------Ccccccc---------Ccccc
Confidence 888999999999999887 22238999999887665432211 1000000 00000
Q ss_pred HHhhhhcccCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCCeEEEecCCCccc-
Q 018555 248 RYHSLCAYMGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGGAEKVEIEHGIHSL- 326 (354)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~- 326 (354)
. .+ ..++ ....+..++. |+||+.|++|.---.+ .-+.+......+++..++|.+|+-
T Consensus 192 ~-ae---------~~Sc------dl~~~~~v~~-~ilVv~~~~espklie-----Qnrdf~~q~~~a~~~~f~n~~hy~I 249 (270)
T KOG4627|consen 192 N-AE---------SVSC------DLWEYTDVTV-WILVVAAEHESPKLIE-----QNRDFADQLRKASFTLFKNYDHYDI 249 (270)
T ss_pred h-hh---------hcCc------cHHHhcCcee-eeeEeeecccCcHHHH-----hhhhHHHHhhhcceeecCCcchhhH
Confidence 0 00 0000 1146678888 9999999999622222 345566666678999999999998
Q ss_pred Cc
Q 018555 327 SN 328 (354)
Q Consensus 327 ~~ 328 (354)
++
T Consensus 250 ~~ 251 (270)
T KOG4627|consen 250 IE 251 (270)
T ss_pred HH
Confidence 44
No 117
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.01 E-value=7.1e-09 Score=90.35 Aligned_cols=206 Identities=13% Similarity=0.060 Sum_probs=120.7
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCC-----------cc---------------
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSS-----------LQ--------------- 145 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~-----------~~--------------- 145 (354)
+..|.||-.||++ +....|..+...-. +||.|+..|-|+ .|.+. .+
T Consensus 81 ~~~P~vV~fhGY~---g~~g~~~~~l~wa~-~Gyavf~MdvRG----Qg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yy 152 (321)
T COG3458 81 GKLPAVVQFHGYG---GRGGEWHDMLHWAV-AGYAVFVMDVRG----QGSSSQDTADPPGGPSDPGFMTRGILDRKDTYY 152 (321)
T ss_pred CccceEEEEeecc---CCCCCccccccccc-cceeEEEEeccc----CCCccccCCCCCCCCcCCceeEeecccCCCceE
Confidence 6679999999999 44545655554444 699999999974 33321 11
Q ss_pred --CcHHHHHHHHHHHHh--hCCCCcEEEEEEChhHHHHHHHHHhcccccccccEEEEecccCchHhhh-cchhHHHHHHH
Q 018555 146 --QDAMEIDQLISYLIN--KDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDREYRA-TLPETAAMIDL 220 (354)
Q Consensus 146 --~~~~dl~~~i~~l~~--~~~~~~~~LvGhS~GG~~a~~~a~~p~~~~~~v~~lIl~~p~~~~~~~~-~~~~~~~~~~~ 220 (354)
....|+..+++.+.. +.+-+++.+-|.|.||.+++..++... +|++++.+=|....-... .... ....+.
T Consensus 153 yr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~----rik~~~~~~Pfl~df~r~i~~~~-~~~yde 227 (321)
T COG3458 153 YRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP----RIKAVVADYPFLSDFPRAIELAT-EGPYDE 227 (321)
T ss_pred EeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh----hhhcccccccccccchhheeecc-cCcHHH
Confidence 114578888887765 455689999999999999999887744 899999877654321111 1100 001111
Q ss_pred HHHHHhcCCCCCCCCCCCCCCCcchHHHHhhhhcccCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcH
Q 018555 221 ASSMIREGRGSELMPREADPCSPITAQRYHSLCAYMGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDK 300 (354)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~ 300 (354)
+..+..... +....-+. .+..-++.....+++. |+|+..|--|++||+..
T Consensus 228 i~~y~k~h~-------------~~e~~v~~--------------TL~yfD~~n~A~RiK~-pvL~svgL~D~vcpPst-- 277 (321)
T COG3458 228 IQTYFKRHD-------------PKEAEVFE--------------TLSYFDIVNLAARIKV-PVLMSVGLMDPVCPPST-- 277 (321)
T ss_pred HHHHHHhcC-------------chHHHHHH--------------HHhhhhhhhHHHhhcc-ceEEeecccCCCCCChh--
Confidence 111111100 00000000 0111122234567898 99999999999998872
Q ss_pred HHHHHHHHHHcCCCeEEEecCCCcccCccHHHHHHHHHHHHHhh
Q 018555 301 KALVERLCRAMGGAEKVEIEHGIHSLSNRVKEAVQAIIDFVKRE 344 (354)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~i~~agH~~~~~p~~~~~~i~~Fl~~~ 344 (354)
....+......+.+.+++.-+|.-. |.-..+.+..|++.+
T Consensus 278 --qFA~yN~l~~~K~i~iy~~~aHe~~--p~~~~~~~~~~l~~l 317 (321)
T COG3458 278 --QFAAYNALTTSKTIEIYPYFAHEGG--PGFQSRQQVHFLKIL 317 (321)
T ss_pred --hHHHhhcccCCceEEEeeccccccC--cchhHHHHHHHHHhh
Confidence 2222222223456778888788873 222334455666544
No 118
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.01 E-value=1.5e-09 Score=96.71 Aligned_cols=229 Identities=10% Similarity=0.103 Sum_probs=116.1
Q ss_pred CCCcEEEEECCCCCCCCcccc-HHHH-----HHHHhhCCcEEEEEcccccCCCCC--CCCccCc-----HHHHHHHHHHH
Q 018555 92 DYQQQVIFIGGLTDGFFATEY-LEPL-----AIALDKERWSLVQFLMTSSYTGYG--TSSLQQD-----AMEIDQLISYL 158 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~-~~~l-----a~~La~~g~~Via~D~R~~~~G~G--~S~~~~~-----~~dl~~~i~~l 158 (354)
+.+|+||=.|-+| .+... |..+ .+.+. +.|.++-+|. +|+. ..+.+.+ ++++++.+..+
T Consensus 21 ~~kp~ilT~HDvG---lNh~scF~~ff~~~~m~~i~-~~f~i~Hi~a----PGqe~ga~~~p~~y~yPsmd~LAe~l~~V 92 (283)
T PF03096_consen 21 GNKPAILTYHDVG---LNHKSCFQGFFNFEDMQEIL-QNFCIYHIDA----PGQEEGAATLPEGYQYPSMDQLAEMLPEV 92 (283)
T ss_dssp TTS-EEEEE--TT-----HHHHCHHHHCSHHHHHHH-TTSEEEEEE-----TTTSTT-----TT-----HHHHHCTHHHH
T ss_pred CCCceEEEecccc---ccchHHHHHHhcchhHHHHh-hceEEEEEeC----CCCCCCcccccccccccCHHHHHHHHHHH
Confidence 3589999999999 44433 4333 34455 3899999999 6764 4444433 45666655555
Q ss_pred HhhCCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHh-hhcchh-HHH-------HHHHHHHHHh-c
Q 018555 159 INKDNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREY-RATLPE-TAA-------MIDLASSMIR-E 227 (354)
Q Consensus 159 ~~~~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~-~~~~~~-~~~-------~~~~~~~~~~-~ 227 (354)
.+.++++.++-+|--.|++|-.+||.. |+ +|.|+||++|...... ..+... ... +-..+.+++. .
T Consensus 93 l~~f~lk~vIg~GvGAGAnIL~rfAl~~p~----~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~~~gmt~~~~d~Ll~h 168 (283)
T PF03096_consen 93 LDHFGLKSVIGFGVGAGANILARFALKHPE----RVLGLILVNPTCTAAGWMEWFYQKLSSWLLYSYGMTSSVKDYLLWH 168 (283)
T ss_dssp HHHHT---EEEEEETHHHHHHHHHHHHSGG----GEEEEEEES---S---HHHHHHHHHH-------CTTS-HHHHHHHH
T ss_pred HHhCCccEEEEEeeccchhhhhhccccCcc----ceeEEEEEecCCCCccHHHHHHHHHhcccccccccccchHHhhhhc
Confidence 556678999999999999999999999 99 9999999998765432 111100 000 0000000000 0
Q ss_pred CCCCCCCCCCCCCCCcchHHHHhhhhcc----cCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHH
Q 018555 228 GRGSELMPREADPCSPITAQRYHSLCAY----MGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKAL 303 (354)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~ 303 (354)
....+... ........+...... .....|+.....+.++....+...| |+|+|.|++.+.+..
T Consensus 169 ~Fg~~~~~-----~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c-~vLlvvG~~Sp~~~~------- 235 (283)
T PF03096_consen 169 YFGKEEEE-----NNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGC-PVLLVVGDNSPHVDD------- 235 (283)
T ss_dssp HS-HHHHH-----CT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS--EEEEEETTSTTHHH-------
T ss_pred cccccccc-----ccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCC-CeEEEEecCCcchhh-------
Confidence 00000000 000011111111100 0111112222233344455667789 999999999975532
Q ss_pred HHHHHHHc-CC-CeEEEecCCCccc-CccHHHHHHHHHHHHHhhC
Q 018555 304 VERLCRAM-GG-AEKVEIEHGIHSL-SNRVKEAVQAIIDFVKREG 345 (354)
Q Consensus 304 ~~~~~~~~-~~-~~~~~i~~agH~~-~~~p~~~~~~i~~Fl~~~~ 345 (354)
+.++...+ |. ..++.+++||=.+ .++|+.+.+.+.=||+.+.
T Consensus 236 vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG~G 280 (283)
T PF03096_consen 236 VVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQGMG 280 (283)
T ss_dssp HHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHHTT
T ss_pred HHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHccCC
Confidence 23444444 33 5678899999999 7899999999999998753
No 119
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.97 E-value=1.2e-08 Score=104.47 Aligned_cols=206 Identities=14% Similarity=0.142 Sum_probs=129.9
Q ss_pred CCcEEEEECCCCCCC----CccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCc--------cCcHHHHHHHHHHHHh
Q 018555 93 YQQQVIFIGGLTDGF----FATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSL--------QQDAMEIDQLISYLIN 160 (354)
Q Consensus 93 ~~p~vIliHG~~~~~----~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~--------~~~~~dl~~~i~~l~~ 160 (354)
+-|.||.+||-+.+. ...--|... .....|+.|+.+|.|++ .|+|..-+ ..+++|...+++.+.+
T Consensus 525 kyPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~~v~~vd~RGs-~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~ 601 (755)
T KOG2100|consen 525 KYPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGFAVLQVDGRGS-GGYGWDFRSALPRNLGDVEVKDQIEAVKKVLK 601 (755)
T ss_pred CCCEEEEecCCCCcceeeeeEEecHHHH--hhccCCeEEEEEcCCCc-CCcchhHHHHhhhhcCCcchHHHHHHHHHHHh
Confidence 457888888866311 111124433 35567999999999865 35665421 1346777777777766
Q ss_pred --hCCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhhcchhHHHHHHHHHHHHhcCCCCCCCCCC
Q 018555 161 --KDNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLASSMIREGRGSELMPRE 237 (354)
Q Consensus 161 --~~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (354)
..+.+++.|+|+|+||++++..+.. +. ..++..|.++|+.+.......- ..+.+. ++..
T Consensus 602 ~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~---~~fkcgvavaPVtd~~~yds~~--------terymg-------~p~~ 663 (755)
T KOG2100|consen 602 LPFIDRSRVAIWGWSYGGYLTLKLLESDPG---DVFKCGVAVAPVTDWLYYDSTY--------TERYMG-------LPSE 663 (755)
T ss_pred cccccHHHeEEeccChHHHHHHHHhhhCcC---ceEEEEEEecceeeeeeecccc--------cHhhcC-------CCcc
Confidence 3566899999999999999999988 53 1555669999988764211100 000000 0000
Q ss_pred CCCCCcchHHHHhhhhcccCCCccccCCCChHHHHHHhcCCCCCcE-EEEeeCCCCCCCchhcHHHHHHHHHHHcCCCeE
Q 018555 238 ADPCSPITAQRYHSLCAYMGDDDMFSSDLSDDQLKQRLGHMANTPC-QVIFSMADEYVPEYVDKKALVERLCRAMGGAEK 316 (354)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~~Pv-Lvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~ 316 (354)
. ... +.+ ......+..++. |. |+|||+.|..|+.+ ....+.+.+....-..++
T Consensus 664 ~-----~~~--y~e-----------------~~~~~~~~~~~~-~~~LliHGt~DdnVh~q-~s~~~~~aL~~~gv~~~~ 717 (755)
T KOG2100|consen 664 N-----DKG--YEE-----------------SSVSSPANNIKT-PKLLLIHGTEDDNVHFQ-QSAILIKALQNAGVPFRL 717 (755)
T ss_pred c-----cch--hhh-----------------ccccchhhhhcc-CCEEEEEcCCcCCcCHH-HHHHHHHHHHHCCCceEE
Confidence 0 000 000 001134556666 77 99999999999855 445567777765444889
Q ss_pred EEecCCCcccCccH--HHHHHHHHHHHHhhC
Q 018555 317 VEIEHGIHSLSNRV--KEAVQAIIDFVKREG 345 (354)
Q Consensus 317 ~~i~~agH~~~~~p--~~~~~~i~~Fl~~~~ 345 (354)
.++|+.+|.+.... ..+...+..|+..+.
T Consensus 718 ~vypde~H~is~~~~~~~~~~~~~~~~~~~~ 748 (755)
T KOG2100|consen 718 LVYPDENHGISYVEVISHLYEKLDRFLRDCF 748 (755)
T ss_pred EEeCCCCcccccccchHHHHHHHHHHHHHHc
Confidence 99999999994433 667888888888543
No 120
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.93 E-value=2.2e-09 Score=93.23 Aligned_cols=83 Identities=19% Similarity=0.306 Sum_probs=55.5
Q ss_pred cEEEEECCCCCCCCccccHHHHHHHHhhCCcE---EEEEcccccCCCCCCC-Cc-------cCcHHHHHHHHHHHHhhCC
Q 018555 95 QQVIFIGGLTDGFFATEYLEPLAIALDKERWS---LVQFLMTSSYTGYGTS-SL-------QQDAMEIDQLISYLINKDN 163 (354)
Q Consensus 95 p~vIliHG~~~~~~~~~~~~~la~~La~~g~~---Via~D~R~~~~G~G~S-~~-------~~~~~dl~~~i~~l~~~~~ 163 (354)
.||||+||.+++ ...-|..+++.|.++||. |+++++ |.+.. .. -+.+.+++++|+.+++.-+
T Consensus 2 ~PVVlVHG~~~~--~~~~w~~~~~~l~~~GY~~~~vya~ty-----g~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TG 74 (219)
T PF01674_consen 2 RPVVLVHGTGGN--AYSNWSTLAPYLKAAGYCDSEVYALTY-----GSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTG 74 (219)
T ss_dssp --EEEE--TTTT--TCGGCCHHHHHHHHTT--CCCEEEE-------S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEECCCCcc--hhhCHHHHHHHHHHcCCCcceeEeccC-----CCCCCCCcccccccchhhHHHHHHHHHHHHHhhC
Confidence 589999999831 445589999999999999 899999 32222 11 1224578888888887778
Q ss_pred CCcEEEEEEChhHHHHHHHHHh
Q 018555 164 SEGVVLLGHSTGCQDIVHYMRA 185 (354)
Q Consensus 164 ~~~~~LvGhS~GG~~a~~~a~~ 185 (354)
. +|-||||||||.++-.|...
T Consensus 75 a-kVDIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 75 A-KVDIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp ---EEEEEETCHHHHHHHHHHH
T ss_pred C-EEEEEEcCCcCHHHHHHHHH
Confidence 8 99999999999999888865
No 121
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.92 E-value=2.4e-08 Score=92.52 Aligned_cols=106 Identities=9% Similarity=0.120 Sum_probs=76.8
Q ss_pred CCcEEEEECCCCCCCCccccH-----HHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcH-HHHHHHHHHHHhhCCCCc
Q 018555 93 YQQQVIFIGGLTDGFFATEYL-----EPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDA-MEIDQLISYLINKDNSEG 166 (354)
Q Consensus 93 ~~p~vIliHG~~~~~~~~~~~-----~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~-~dl~~~i~~l~~~~~~~~ 166 (354)
.+++|+++|-+- .....| +.++..|.+.|+.|+.++.|+--.+++.-..++.+ +.+.+.++.+++..+.++
T Consensus 106 ~~~PlLiVpP~i---Nk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~~~~edYi~e~l~~aid~v~~itg~~~ 182 (445)
T COG3243 106 LKRPLLIVPPWI---NKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAAKNLEDYILEGLSEAIDTVKDITGQKD 182 (445)
T ss_pred CCCceEeecccc---CceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhhccHHHHHHHHHHHHHHHHHHHhCccc
Confidence 457888888877 222223 46788898899999999996422233333344444 667788888888888899
Q ss_pred EEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCc
Q 018555 167 VVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSD 204 (354)
Q Consensus 167 ~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~ 204 (354)
+.++||+.||.++..+++. +. .+|+.++++....+
T Consensus 183 InliGyCvGGtl~~~ala~~~~---k~I~S~T~lts~~D 218 (445)
T COG3243 183 INLIGYCVGGTLLAAALALMAA---KRIKSLTLLTSPVD 218 (445)
T ss_pred cceeeEecchHHHHHHHHhhhh---cccccceeeecchh
Confidence 9999999999999888887 55 15888887765443
No 122
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=98.90 E-value=4.3e-08 Score=86.51 Aligned_cols=226 Identities=9% Similarity=0.080 Sum_probs=133.7
Q ss_pred CCCcEEEEECCCCCCCCcccc-HHH-----HHHHHhhCCcEEEEEcccccCCCC--CCCCccCc-----HHHHHHHHHHH
Q 018555 92 DYQQQVIFIGGLTDGFFATEY-LEP-----LAIALDKERWSLVQFLMTSSYTGY--GTSSLQQD-----AMEIDQLISYL 158 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~-~~~-----la~~La~~g~~Via~D~R~~~~G~--G~S~~~~~-----~~dl~~~i~~l 158 (354)
+.+|+||=.|.++ .+... |.. -+..+.+ .|.|+-+|. +|+ |...++.+ .+++++.+-.+
T Consensus 44 ~~kpaiiTyhDlg---lN~~scFq~ff~~p~m~ei~~-~fcv~HV~~----PGqe~gAp~~p~~y~yPsmd~LAd~l~~V 115 (326)
T KOG2931|consen 44 GNKPAIITYHDLG---LNHKSCFQGFFNFPDMAEILE-HFCVYHVDA----PGQEDGAPSFPEGYPYPSMDDLADMLPEV 115 (326)
T ss_pred CCCceEEEecccc---cchHhHhHHhhcCHhHHHHHh-heEEEecCC----CccccCCccCCCCCCCCCHHHHHHHHHHH
Confidence 4688999999998 44433 332 2344554 499999999 665 44445443 56666666666
Q ss_pred HhhCCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHh-hhcch-hHH-------HHHHHHHHHHh-c
Q 018555 159 INKDNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREY-RATLP-ETA-------AMIDLASSMIR-E 227 (354)
Q Consensus 159 ~~~~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~-~~~~~-~~~-------~~~~~~~~~~~-~ 227 (354)
.+.++.+.++=+|--.|++|-.+||.. |+ +|.||||+++...... ..+.. +.. .+-..+.+++. .
T Consensus 116 L~~f~lk~vIg~GvGAGAyIL~rFAl~hp~----rV~GLvLIn~~~~a~gwiew~~~K~~s~~l~~~Gmt~~~~d~ll~H 191 (326)
T KOG2931|consen 116 LDHFGLKSVIGMGVGAGAYILARFALNHPE----RVLGLVLINCDPCAKGWIEWAYNKVSSNLLYYYGMTQGVKDYLLAH 191 (326)
T ss_pred HHhcCcceEEEecccccHHHHHHHHhcChh----heeEEEEEecCCCCchHHHHHHHHHHHHHHHhhchhhhHHHHHHHH
Confidence 666678999999999999999999999 99 9999999998664321 11110 000 11111222221 1
Q ss_pred CCCCCCCCCCC-----------CCCCcchHHHHhhhhcccCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCc
Q 018555 228 GRGSELMPREA-----------DPCSPITAQRYHSLCAYMGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPE 296 (354)
Q Consensus 228 ~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~ 296 (354)
....+.+.... ....+.+..+|++..... . ++..+.. .....++| |+|++.|++.+.+..
T Consensus 192 ~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R--~-----DL~~~r~-~~~~tlkc-~vllvvGd~Sp~~~~ 262 (326)
T KOG2931|consen 192 HFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGR--R-----DLSIERP-KLGTTLKC-PVLLVVGDNSPHVSA 262 (326)
T ss_pred HhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCC--C-----CccccCC-CcCccccc-cEEEEecCCCchhhh
Confidence 11111111100 001122223333221111 1 1111000 11126789 999999999986643
Q ss_pred hhcHHHHHHHHHHHc-C-CCeEEEecCCCccc-CccHHHHHHHHHHHHHhhC
Q 018555 297 YVDKKALVERLCRAM-G-GAEKVEIEHGIHSL-SNRVKEAVQAIIDFVKREG 345 (354)
Q Consensus 297 ~~~~~~~~~~~~~~~-~-~~~~~~i~~agH~~-~~~p~~~~~~i~~Fl~~~~ 345 (354)
- -++...+ | +..+..+.+||=.+ .++|..+.+.+.=|++...
T Consensus 263 v-------v~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG~G 307 (326)
T KOG2931|consen 263 V-------VECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQGMG 307 (326)
T ss_pred h-------hhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHccCC
Confidence 2 2344433 2 35678899999999 5699999999999998653
No 123
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=98.89 E-value=5.3e-08 Score=93.80 Aligned_cols=209 Identities=20% Similarity=0.153 Sum_probs=128.0
Q ss_pred CCCCcEEEEECCCCC------CCCccccHHHHHHHHhhCCcEEEEEccccc-CCCCCCCC------ccCcHHHHHHHHHH
Q 018555 91 GDYQQQVIFIGGLTD------GFFATEYLEPLAIALDKERWSLVQFLMTSS-YTGYGTSS------LQQDAMEIDQLISY 157 (354)
Q Consensus 91 ~~~~p~vIliHG~~~------~~~~~~~~~~la~~La~~g~~Via~D~R~~-~~G~G~S~------~~~~~~dl~~~i~~ 157 (354)
+.+-|+++++=|.+. .+....+.+ ...|+..||.|+.+|-|++ ++|----+ -.-.++|-.+-+++
T Consensus 639 gkkYptvl~VYGGP~VQlVnnsfkgi~ylR--~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~ 716 (867)
T KOG2281|consen 639 GKKYPTVLNVYGGPGVQLVNNSFKGIQYLR--FCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQM 716 (867)
T ss_pred CCCCceEEEEcCCCceEEeeccccceehhh--hhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHH
Confidence 455688888887553 111222222 3457778999999999853 22211111 01124555556666
Q ss_pred HHhhC---CCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhhcchhHHHHHHHHHHHHhcCCCCCC
Q 018555 158 LINKD---NSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLASSMIREGRGSEL 233 (354)
Q Consensus 158 l~~~~---~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (354)
|.+++ +..++.+-|+|+||++++....+ |+ ..+..|.-+|+.+++...... .++++.
T Consensus 717 Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~----IfrvAIAGapVT~W~~YDTgY--------TERYMg------- 777 (867)
T KOG2281|consen 717 LAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPN----IFRVAIAGAPVTDWRLYDTGY--------TERYMG------- 777 (867)
T ss_pred HHHhcCcccchheeEeccccccHHHHHHhhcCcc----eeeEEeccCcceeeeeecccc--------hhhhcC-------
Confidence 66654 46799999999999999998888 88 888888888888776443320 011110
Q ss_pred CCCCCCCCCcchHHHHhhhhcccCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCC
Q 018555 234 MPREADPCSPITAQRYHSLCAYMGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGG 313 (354)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~ 313 (354)
+|... + ..+. .. .-...-+.|+.=.. ..|+|||--|+-|... ....++..+.++...
T Consensus 778 ~P~~n--E-----~gY~------------ag--SV~~~Veklpdepn-RLlLvHGliDENVHF~-Hts~Lvs~lvkagKp 834 (867)
T KOG2281|consen 778 YPDNN--E-----HGYG------------AG--SVAGHVEKLPDEPN-RLLLVHGLIDENVHFA-HTSRLVSALVKAGKP 834 (867)
T ss_pred CCccc--h-----hccc------------ch--hHHHHHhhCCCCCc-eEEEEecccccchhhh-hHHHHHHHHHhCCCc
Confidence 00000 0 0000 00 00011134444445 7999999999987644 333466666676667
Q ss_pred CeEEEecCCCccc--CccHHHHHHHHHHHHHh
Q 018555 314 AEKVEIEHGIHSL--SNRVKEAVQAIIDFVKR 343 (354)
Q Consensus 314 ~~~~~i~~agH~~--~~~p~~~~~~i~~Fl~~ 343 (354)
.++.++|+--|.+ .+...-+...++.||++
T Consensus 835 yeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 835 YELQIFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred eEEEEccccccccCCCccchhHHHHHHHHHhh
Confidence 8899999999999 34455667789999985
No 124
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.88 E-value=6e-08 Score=84.46 Aligned_cols=104 Identities=17% Similarity=0.117 Sum_probs=71.1
Q ss_pred CCcEEEEECCCCCCCCccccHHHH--HHHHh-hCCcEEEEEccc------ccCCCCCCCC--ccCcHHHHHHHHHHHHhh
Q 018555 93 YQQQVIFIGGLTDGFFATEYLEPL--AIALD-KERWSLVQFLMT------SSYTGYGTSS--LQQDAMEIDQLISYLINK 161 (354)
Q Consensus 93 ~~p~vIliHG~~~~~~~~~~~~~l--a~~La-~~g~~Via~D~R------~~~~G~G~S~--~~~~~~dl~~~i~~l~~~ 161 (354)
+.|.||++||.+ .+...+... ...|+ ++||-|+.|+.. +.|.-+.... -..+...|.++++++..+
T Consensus 15 ~~PLVv~LHG~~---~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~ 91 (220)
T PF10503_consen 15 PVPLVVVLHGCG---QSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAAR 91 (220)
T ss_pred CCCEEEEeCCCC---CCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhh
Confidence 468999999988 444433221 12344 379999999863 1121112111 123456788889988875
Q ss_pred C--CCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccC
Q 018555 162 D--NSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVS 203 (354)
Q Consensus 162 ~--~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~ 203 (354)
+ +..+|++.|+|.||+++..++.. |+ .+.++...+...
T Consensus 92 ~~iD~~RVyv~G~S~Gg~ma~~la~~~pd----~faa~a~~sG~~ 132 (220)
T PF10503_consen 92 YNIDPSRVYVTGLSNGGMMANVLACAYPD----LFAAVAVVSGVP 132 (220)
T ss_pred cccCCCceeeEEECHHHHHHHHHHHhCCc----cceEEEeecccc
Confidence 4 45799999999999999999998 98 898888776543
No 125
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.88 E-value=6.2e-09 Score=90.86 Aligned_cols=155 Identities=14% Similarity=0.141 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHhh--CCCCcEEEEEEChhHHHHHHHHHhcccccccccEEEEecccCchHhhh-cchhHHHHHHHHHHHH
Q 018555 149 MEIDQLISYLINK--DNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDREYRA-TLPETAAMIDLASSMI 225 (354)
Q Consensus 149 ~dl~~~i~~l~~~--~~~~~~~LvGhS~GG~~a~~~a~~p~~~~~~v~~lIl~~p~~~~~~~~-~~~~~~~~~~~~~~~~ 225 (354)
+-.++++++|.++ ...++|.|+|.|.||-+|+.+|...+ .|+++|.++|........ ........+.....-.
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~----~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~~~ 79 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP----QISAVVAISPSSVVFQGIGFYRDSSKPLPYLPFDI 79 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS----SEEEEEEES--SB--SSEEEETTE--EE----B-G
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC----CccEEEEeCCceeEecchhcccCCCccCCcCCcCh
Confidence 4467889999874 33469999999999999999999944 799999998855332110 0000000000000000
Q ss_pred hcCCCCCCCCCCCCCCCcchHHHHhhhhcccCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHH
Q 018555 226 REGRGSELMPREADPCSPITAQRYHSLCAYMGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVE 305 (354)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~ 305 (354)
.. ... ...........+.. ...+. .....-.+.++++ |+|+|.|++|.+.|.....+.+.+
T Consensus 80 ~~------~~~-~~~~~~~~~~~~~~-----~~~~~------~~~a~IpvE~i~~-piLli~g~dD~~WpS~~~a~~i~~ 140 (213)
T PF08840_consen 80 SK------FSW-NEPGLLRSRYAFEL-----ADDKA------VEEARIPVEKIKG-PILLISGEDDQIWPSSEMAEQIEE 140 (213)
T ss_dssp GG-------EE--TTS-EE-TT-B-------TTTGG------GCCCB--GGG--S-EEEEEEETT-SSS-HHHHHHHHHH
T ss_pred hh------cee-cCCcceehhhhhhc-----ccccc------cccccccHHHcCC-CEEEEEeCCCCccchHHHHHHHHH
Confidence 00 000 00000000000000 00000 0000124668899 999999999999987754455555
Q ss_pred HHHHHcC--CCeEEEecCCCccc
Q 018555 306 RLCRAMG--GAEKVEIEHGIHSL 326 (354)
Q Consensus 306 ~~~~~~~--~~~~~~i~~agH~~ 326 (354)
++++... +.+++.|++|||.+
T Consensus 141 rL~~~~~~~~~~~l~Y~~aGH~i 163 (213)
T PF08840_consen 141 RLKAAGFPHNVEHLSYPGAGHLI 163 (213)
T ss_dssp HHHCTT-----EEEEETTB-S--
T ss_pred HHHHhCCCCcceEEEcCCCCcee
Confidence 6655432 35778899999997
No 126
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.85 E-value=3.6e-07 Score=86.42 Aligned_cols=103 Identities=8% Similarity=0.003 Sum_probs=66.5
Q ss_pred cEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCC---CccCcHHHHHHHHHHHHhhCCCCcEEEEE
Q 018555 95 QQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTS---SLQQDAMEIDQLISYLINKDNSEGVVLLG 171 (354)
Q Consensus 95 p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S---~~~~~~~dl~~~i~~l~~~~~~~~~~LvG 171 (354)
|+||++.-+.. ......+.+++.|-+ |+.|+..|.++ -+.. ...-..+|..+.+..+.+..|.+ ++|+|
T Consensus 103 ~pvLiV~Pl~g--~~~~L~RS~V~~Ll~-g~dVYl~DW~~----p~~vp~~~~~f~ldDYi~~l~~~i~~~G~~-v~l~G 174 (406)
T TIGR01849 103 PAVLIVAPMSG--HYATLLRSTVEALLP-DHDVYITDWVN----ARMVPLSAGKFDLEDYIDYLIEFIRFLGPD-IHVIA 174 (406)
T ss_pred CcEEEEcCCch--HHHHHHHHHHHHHhC-CCcEEEEeCCC----CCCCchhcCCCCHHHHHHHHHHHHHHhCCC-CcEEE
Confidence 68888887762 222335888999997 99999999943 2211 12222334333333333444555 99999
Q ss_pred EChhHHHHHHHHHh-cccc-cccccEEEEecccCch
Q 018555 172 HSTGCQDIVHYMRA-NAAC-SRAVRAAIFQAPVSDR 205 (354)
Q Consensus 172 hS~GG~~a~~~a~~-p~~~-~~~v~~lIl~~p~~~~ 205 (354)
.++||..++.+++. .+.. ..+++.++++++..+.
T Consensus 175 vCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~ 210 (406)
T TIGR01849 175 VCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDA 210 (406)
T ss_pred EchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccC
Confidence 99999998877765 3222 1269999988765553
No 127
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=98.84 E-value=2.2e-08 Score=90.87 Aligned_cols=105 Identities=16% Similarity=0.094 Sum_probs=74.3
Q ss_pred CCCCcEEEEECCCCCCCCccccHHHHH----------HHHhhCCcEEEEEcccccCCCCCCCC------ccCcHHHHHHH
Q 018555 91 GDYQQQVIFIGGLTDGFFATEYLEPLA----------IALDKERWSLVQFLMTSSYTGYGTSS------LQQDAMEIDQL 154 (354)
Q Consensus 91 ~~~~p~vIliHG~~~~~~~~~~~~~la----------~~La~~g~~Via~D~R~~~~G~G~S~------~~~~~~dl~~~ 154 (354)
+++-|+||..|+++ .....-.... ..|+++||.|+..|.| |.|.|. .+...+|..++
T Consensus 17 ~~~~P~il~~tpY~---~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~R----G~g~S~G~~~~~~~~e~~D~~d~ 89 (272)
T PF02129_consen 17 GGPFPVILTRTPYG---KGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVR----GTGGSEGEFDPMSPNEAQDGYDT 89 (272)
T ss_dssp SSSEEEEEEEESST---CTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-T----TSTTS-S-B-TTSHHHHHHHHHH
T ss_pred CCcccEEEEccCcC---CCCCcccchhhhhcccchhHHHHHhCCCEEEEECCc----ccccCCCccccCChhHHHHHHHH
Confidence 35568999999999 3321111111 1277789999999995 777774 22357899999
Q ss_pred HHHHHhhC-CCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchH
Q 018555 155 ISYLINKD-NSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDRE 206 (354)
Q Consensus 155 i~~l~~~~-~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~ 206 (354)
|+|+.++- ...+|.++|.|++|.+++..|.. |. .+++++...+..+..
T Consensus 90 I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p----~LkAi~p~~~~~d~~ 139 (272)
T PF02129_consen 90 IEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPP----HLKAIVPQSGWSDLY 139 (272)
T ss_dssp HHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-T----TEEEEEEESE-SBTC
T ss_pred HHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCC----CceEEEecccCCccc
Confidence 99998851 12589999999999999999996 77 899999887766543
No 128
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.83 E-value=3.2e-08 Score=90.74 Aligned_cols=88 Identities=19% Similarity=0.161 Sum_probs=67.1
Q ss_pred CCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCC--------cc-----CcHHHHHHHHHHHH
Q 018555 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSS--------LQ-----QDAMEIDQLISYLI 159 (354)
Q Consensus 93 ~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~--------~~-----~~~~dl~~~i~~l~ 159 (354)
.-|+|||-||.| ....-+..+++.|++.||-|.++|+.++- .|... .. +...|+..++++|.
T Consensus 70 ~~PlvvlshG~G---s~~~~f~~~A~~lAs~Gf~Va~~~hpgs~--~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~ 144 (365)
T COG4188 70 LLPLVVLSHGSG---SYVTGFAWLAEHLASYGFVVAAPDHPGSN--AGGAPAAYAGPGSYAPAEWWERPLDISALLDALL 144 (365)
T ss_pred cCCeEEecCCCC---CCccchhhhHHHHhhCceEEEeccCCCcc--cccCChhhcCCcccchhhhhcccccHHHHHHHHH
Confidence 569999999999 55666788999999999999999994311 22211 11 33567888888776
Q ss_pred hh---------CCCCcEEEEEEChhHHHHHHHHHh
Q 018555 160 NK---------DNSEGVVLLGHSTGCQDIVHYMRA 185 (354)
Q Consensus 160 ~~---------~~~~~~~LvGhS~GG~~a~~~a~~ 185 (354)
+. ++..+|.++|||+||+.+++.+..
T Consensus 145 ~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA 179 (365)
T COG4188 145 QLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGA 179 (365)
T ss_pred HhhcCcccccccCccceEEEecccccHHHHHhccc
Confidence 63 456799999999999999998864
No 129
>PRK04940 hypothetical protein; Provisional
Probab=98.81 E-value=3.3e-07 Score=76.58 Aligned_cols=117 Identities=22% Similarity=0.206 Sum_probs=70.6
Q ss_pred CcEEEEEEChhHHHHHHHHHhcccccccccEEEEecccCchHhhhcchhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcc
Q 018555 165 EGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLASSMIREGRGSELMPREADPCSPI 244 (354)
Q Consensus 165 ~~~~LvGhS~GG~~a~~~a~~p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (354)
+++.|||+|+||+-|..++.+.. + ..||++|...+... + ...+. .. ..+
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g-----~-~aVLiNPAv~P~~~--------L----~~~ig--~~-----~~y------ 108 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG-----I-RQVIFNPNLFPEEN--------M----EGKID--RP-----EEY------ 108 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC-----C-CEEEECCCCChHHH--------H----HHHhC--CC-----cch------
Confidence 57999999999999999998732 2 56788887776321 0 01110 00 000
Q ss_pred hHHHHhhhhcccCCCccccCCCChHHHHHHhcCCCC-CcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCC-eEEEecCC
Q 018555 245 TAQRYHSLCAYMGDDDMFSSDLSDDQLKQRLGHMAN-TPCQVIFSMADEYVPEYVDKKALVERLCRAMGGA-EKVEIEHG 322 (354)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~-~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~-~~~~i~~a 322 (354)
. .+....+ +.|. ++. ...+++..+.|++.... ...+.+.+. ++++.+|+
T Consensus 109 ------------------~-~~~~~h~-~eL~-~~~p~r~~vllq~gDEvLDyr--------~a~~~y~~~y~~~v~~GG 159 (180)
T PRK04940 109 ------------------A-DIATKCV-TNFR-EKNRDRCLVILSRNDEVLDSQ--------RTAEELHPYYEIVWDEEQ 159 (180)
T ss_pred ------------------h-hhhHHHH-HHhh-hcCcccEEEEEeCCCcccCHH--------HHHHHhccCceEEEECCC
Confidence 0 1111111 2232 233 14599999999988765 222233455 78888888
Q ss_pred CcccCccHHHHHHHHHHHHH
Q 018555 323 IHSLSNRVKEAVQAIIDFVK 342 (354)
Q Consensus 323 gH~~~~~p~~~~~~i~~Fl~ 342 (354)
+|.+.+ -++....|++|+.
T Consensus 160 dH~f~~-fe~~l~~I~~F~~ 178 (180)
T PRK04940 160 THKFKN-ISPHLQRIKAFKT 178 (180)
T ss_pred CCCCCC-HHHHHHHHHHHHh
Confidence 888854 3457778888874
No 130
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.75 E-value=3.4e-07 Score=100.49 Aligned_cols=101 Identities=14% Similarity=0.013 Sum_probs=72.8
Q ss_pred CCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCc-cCcHHHHHHHH-HHHHhhCCCCcEEEE
Q 018555 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSL-QQDAMEIDQLI-SYLINKDNSEGVVLL 170 (354)
Q Consensus 93 ~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~-~~~~~dl~~~i-~~l~~~~~~~~~~Lv 170 (354)
.+++|+|+||++ +....|..+++.|.+ +++|+++|+ +|++.... ....+++.+.+ +.+.......+++|+
T Consensus 1067 ~~~~l~~lh~~~---g~~~~~~~l~~~l~~-~~~v~~~~~----~g~~~~~~~~~~l~~la~~~~~~i~~~~~~~p~~l~ 1138 (1296)
T PRK10252 1067 DGPTLFCFHPAS---GFAWQFSVLSRYLDP-QWSIYGIQS----PRPDGPMQTATSLDEVCEAHLATLLEQQPHGPYHLL 1138 (1296)
T ss_pred CCCCeEEecCCC---CchHHHHHHHHhcCC-CCcEEEEEC----CCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCEEEE
Confidence 357899999999 677789999999985 899999999 78876532 23344444332 222222223589999
Q ss_pred EEChhHHHHHHHHHh-cccccccccEEEEeccc
Q 018555 171 GHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPV 202 (354)
Q Consensus 171 GhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~ 202 (354)
||||||.+|.++|.+ .+ ...++..++++++.
T Consensus 1139 G~S~Gg~vA~e~A~~l~~-~~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1139 GYSLGGTLAQGIAARLRA-RGEEVAFLGLLDTW 1170 (1296)
T ss_pred EechhhHHHHHHHHHHHH-cCCceeEEEEecCC
Confidence 999999999999986 22 11288999988763
No 131
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.74 E-value=3.3e-08 Score=94.83 Aligned_cols=89 Identities=16% Similarity=0.164 Sum_probs=71.3
Q ss_pred ccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCcc-----CcHHHHHHHHHHHHhhCCCCcEEEEEEChhHHHHHHHH
Q 018555 109 ATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQ-----QDAMEIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYM 183 (354)
Q Consensus 109 ~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~-----~~~~dl~~~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a 183 (354)
...+|..+++.|.+.||.+ ..|+ .|+|..-.. ...+++.++++.+.+..+..+++||||||||.++..++
T Consensus 106 ~~~~~~~li~~L~~~GY~~-~~dL----~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl 180 (440)
T PLN02733 106 EVYYFHDMIEQLIKWGYKE-GKTL----FGFGYDFRQSNRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFM 180 (440)
T ss_pred hHHHHHHHHHHHHHcCCcc-CCCc----ccCCCCccccccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHH
Confidence 5678999999999999765 8899 688765432 23567888888887777788999999999999999999
Q ss_pred Hh-cccccccccEEEEeccc
Q 018555 184 RA-NAACSRAVRAAIFQAPV 202 (354)
Q Consensus 184 ~~-p~~~~~~v~~lIl~~p~ 202 (354)
.. ++.....|+.+|++++.
T Consensus 181 ~~~p~~~~k~I~~~I~la~P 200 (440)
T PLN02733 181 SLHSDVFEKYVNSWIAIAAP 200 (440)
T ss_pred HHCCHhHHhHhccEEEECCC
Confidence 87 65344578999998764
No 132
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.73 E-value=2.1e-08 Score=72.80 Aligned_cols=65 Identities=17% Similarity=0.246 Sum_probs=48.3
Q ss_pred EEecCC-CCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccC-cHHHHHHHHHHH
Q 018555 87 AFKTGD-YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ-DAMEIDQLISYL 158 (354)
Q Consensus 87 ~~~~~~-~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~-~~~dl~~~i~~l 158 (354)
.|.+.+ .+.+|+++||++ .....+..+++.|+++||.|+++|+ +|||+|.-.. ...+..++++.+
T Consensus 8 ~w~p~~~~k~~v~i~HG~~---eh~~ry~~~a~~L~~~G~~V~~~D~----rGhG~S~g~rg~~~~~~~~v~D~ 74 (79)
T PF12146_consen 8 RWKPENPPKAVVVIVHGFG---EHSGRYAHLAEFLAEQGYAVFAYDH----RGHGRSEGKRGHIDSFDDYVDDL 74 (79)
T ss_pred EecCCCCCCEEEEEeCCcH---HHHHHHHHHHHHHHhCCCEEEEECC----CcCCCCCCcccccCCHHHHHHHH
Confidence 344444 488999999999 5666789999999999999999999 6999997432 233344444443
No 133
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.72 E-value=5.6e-07 Score=82.30 Aligned_cols=46 Identities=35% Similarity=0.391 Sum_probs=39.2
Q ss_pred CCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHc-CCCeEEEecCCCccc
Q 018555 279 ANTPCQVIFSMADEYVPEYVDKKALVERLCRAM-GGAEKVEIEHGIHSL 326 (354)
Q Consensus 279 ~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~-~~~~~~~i~~agH~~ 326 (354)
+. |++|.+|..|.++|.. ..+++.+++++.. .+.+++.++..+|..
T Consensus 219 ~~-Pv~i~~g~~D~vvP~~-~~~~l~~~~c~~G~a~V~~~~~~~~~H~~ 265 (290)
T PF03583_consen 219 TV-PVLIYQGTADEVVPPA-DTDALVAKWCAAGGADVEYVRYPGGGHLG 265 (290)
T ss_pred CC-CEEEEecCCCCCCChH-HHHHHHHHHHHcCCCCEEEEecCCCChhh
Confidence 56 9999999999999976 5566788888877 578888999999997
No 134
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.71 E-value=1e-06 Score=81.28 Aligned_cols=187 Identities=16% Similarity=0.202 Sum_probs=117.7
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCC----------------CCCCCCcc----------
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYT----------------GYGTSSLQ---------- 145 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~----------------G~G~S~~~---------- 145 (354)
...-.||++||.+.+.........|-+.|.+.||+++++.+..--. +-...+.+
T Consensus 85 ~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 164 (310)
T PF12048_consen 85 KPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQ 164 (310)
T ss_pred CCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCcccccc
Confidence 4456999999999543333446777888999999999998842000 00000110
Q ss_pred ----------CcHHHHHHHHHHHHhhCCCCcEEEEEEChhHHHHHHHHHhcccccccccEEEEecccCchHhhhcchhHH
Q 018555 146 ----------QDAMEIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDREYRATLPETA 215 (354)
Q Consensus 146 ----------~~~~dl~~~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~ 215 (354)
....-|.++++++. ..+.++++||||..|+..++.|..+ .....+++||++++.......
T Consensus 165 ~~~~~~~~~~~~~ari~Aa~~~~~-~~~~~~ivlIg~G~gA~~~~~~la~--~~~~~~daLV~I~a~~p~~~~------- 234 (310)
T PF12048_consen 165 EAEAREAYEERLFARIEAAIAFAQ-QQGGKNIVLIGHGTGAGWAARYLAE--KPPPMPDALVLINAYWPQPDR------- 234 (310)
T ss_pred HhHHhHHHHHHHHHHHHHHHHHHH-hcCCceEEEEEeChhHHHHHHHHhc--CCCcccCeEEEEeCCCCcchh-------
Confidence 00123445555544 3566679999999999999999988 111268999999874332110
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCcchHHHHhhhhcccCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCC
Q 018555 216 AMIDLASSMIREGRGSELMPREADPCSPITAQRYHSLCAYMGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVP 295 (354)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp 295 (354)
...+.+.+.+++. |+|=|++.+...
T Consensus 235 ----------------------------------------------------n~~l~~~la~l~i-PvLDi~~~~~~~-- 259 (310)
T PF12048_consen 235 ----------------------------------------------------NPALAEQLAQLKI-PVLDIYSADNPA-- 259 (310)
T ss_pred ----------------------------------------------------hhhHHHHhhccCC-CEEEEecCCChH--
Confidence 0112256677888 999999887321
Q ss_pred chhcHHHHHHHHHHHc--CCCeEEEecCCCcccCccHHHHHHHHHHHHHhh
Q 018555 296 EYVDKKALVERLCRAM--GGAEKVEIEHGIHSLSNRVKEAVQAIIDFVKRE 344 (354)
Q Consensus 296 ~~~~~~~~~~~~~~~~--~~~~~~~i~~agH~~~~~p~~~~~~i~~Fl~~~ 344 (354)
........+.+.+.. ++.+.+.+.+..|......+.+.+.|..||+++
T Consensus 260 -~~~~a~~R~~~a~r~~~~~YrQ~~L~~~~~~~~~~~~~l~~rIrGWL~~~ 309 (310)
T PF12048_consen 260 -SQQTAKQRKQAAKRNKKPDYRQIQLPGLPDNPSGWQEQLLRRIRGWLKRH 309 (310)
T ss_pred -HHHHHHHHHHHHHhccCCCceeEecCCCCCChhhHHHHHHHHHHHHHHhh
Confidence 111122333333333 456667788888877655666999999999875
No 135
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.66 E-value=1.3e-06 Score=75.76 Aligned_cols=104 Identities=19% Similarity=0.164 Sum_probs=75.5
Q ss_pred CcEEEEECCCCCCCCccccHHHHHHHHhhCC-----cEEEEEcccccCCC----CCC------------------CCccC
Q 018555 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKER-----WSLVQFLMTSSYTG----YGT------------------SSLQQ 146 (354)
Q Consensus 94 ~p~vIliHG~~~~~~~~~~~~~la~~La~~g-----~~Via~D~R~~~~G----~G~------------------S~~~~ 146 (354)
.-+.|||||++ ++......+++.|.+.+ --++..|- .| -|. .+..+
T Consensus 45 ~iPTIfIhGsg---G~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~----dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~ 117 (288)
T COG4814 45 AIPTIFIHGSG---GTASSLNGMVNQLLPDYKAGTESLTMTVDV----DGSLKVTGKISKDAKNPIIEFGFEDNTASGLD 117 (288)
T ss_pred ccceEEEecCC---CChhHHHHHHHHhhhcccccccceEEEEcC----CCcEEEeeeecccCCCCeEEEEEecCcCchhh
Confidence 45789999999 77777888999888633 12344444 22 111 11223
Q ss_pred cHHHHHHHHHHHHhhCCCCcEEEEEEChhHHHHHHHHHh--cccccccccEEEEecccCc
Q 018555 147 DAMEIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRA--NAACSRAVRAAIFQAPVSD 204 (354)
Q Consensus 147 ~~~dl~~~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~--p~~~~~~v~~lIl~~p~~~ 204 (354)
....+..++.+|..+++++++-+|||||||.-...|+.. .+...+.+..+|.++....
T Consensus 118 ~s~wlk~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 118 QSKWLKKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 356788899999999999999999999999999999986 4445567899998775443
No 136
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.62 E-value=4.1e-07 Score=87.25 Aligned_cols=164 Identities=16% Similarity=0.152 Sum_probs=100.1
Q ss_pred CCcEEEEECCCC-CCCCcccc--HHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHH----hhCCCC
Q 018555 93 YQQQVIFIGGLT-DGFFATEY--LEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLI----NKDNSE 165 (354)
Q Consensus 93 ~~p~vIliHG~~-~~~~~~~~--~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~----~~~~~~ 165 (354)
..|.+|++||.+ ....+..+ |........ +--.|.+||++ .+.|.-.....++-+..+..+.. .++...
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~g-evvev~tfdl~---n~igG~nI~h~ae~~vSf~r~kvlei~gefpha 250 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKG-EVVEVPTFDLN---NPIGGANIKHAAEYSVSFDRYKVLEITGEFPHA 250 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhc-eeeeecccccc---CCCCCcchHHHHHHHHHHhhhhhhhhhccCCCC
Confidence 358899999987 33333333 444444433 35677888987 45554222222333333333222 256678
Q ss_pred cEEEEEEChhHHHHHHHHHhcccccccccEEEEecccCchHhhhcchhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcch
Q 018555 166 GVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLASSMIREGRGSELMPREADPCSPIT 245 (354)
Q Consensus 166 ~~~LvGhS~GG~~a~~~a~~p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (354)
+++|+|.|||+.++.+.... .....|+++|.++=..+. + ++
T Consensus 251 ~IiLvGrsmGAlVachVSps--nsdv~V~~vVCigypl~~-------------------v-dg----------------- 291 (784)
T KOG3253|consen 251 PIILVGRSMGALVACHVSPS--NSDVEVDAVVCIGYPLDT-------------------V-DG----------------- 291 (784)
T ss_pred ceEEEecccCceeeEEeccc--cCCceEEEEEEecccccC-------------------C-Cc-----------------
Confidence 99999999997777666543 222358888876511100 0 00
Q ss_pred HHHHhhhhcccCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHc-CCCeEEEecCCCc
Q 018555 246 AQRYHSLCAYMGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAM-GGAEKVEIEHGIH 324 (354)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~-~~~~~~~i~~agH 324 (354)
..+ +.+ +.+-.++. |+|||.|.+|.++++. ..+.+++.+ ...++++|.+++|
T Consensus 292 ---------prg--------irD----E~Lldmk~-PVLFV~Gsnd~mcspn-----~ME~vreKMqA~~elhVI~~adh 344 (784)
T KOG3253|consen 292 ---------PRG--------IRD----EALLDMKQ-PVLFVIGSNDHMCSPN-----SMEEVREKMQAEVELHVIGGADH 344 (784)
T ss_pred ---------ccC--------Ccc----hhhHhcCC-ceEEEecCCcccCCHH-----HHHHHHHHhhccceEEEecCCCc
Confidence 000 011 33345778 9999999999999887 666666554 4578999999999
Q ss_pred cc
Q 018555 325 SL 326 (354)
Q Consensus 325 ~~ 326 (354)
.+
T Consensus 345 sm 346 (784)
T KOG3253|consen 345 SM 346 (784)
T ss_pred cc
Confidence 98
No 137
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.60 E-value=4.3e-07 Score=80.32 Aligned_cols=109 Identities=16% Similarity=0.213 Sum_probs=73.8
Q ss_pred CCCcEEEEECCCCCCCCcccc-HHHHHHHHhhCCc--EEEEEcccccCCCCCCCCc-----c---CcHHHHHHHHHHHHh
Q 018555 92 DYQQQVIFIGGLTDGFFATEY-LEPLAIALDKERW--SLVQFLMTSSYTGYGTSSL-----Q---QDAMEIDQLISYLIN 160 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~-~~~la~~La~~g~--~Via~D~R~~~~G~G~S~~-----~---~~~~dl~~~i~~l~~ 160 (354)
+.+..+||||||. .+... ....++.....+| .++.|.+ ++.|.... . .....+.++++.|.+
T Consensus 16 ~~~~vlvfVHGyn---~~f~~a~~r~aql~~~~~~~~~~i~FsW----PS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~ 88 (233)
T PF05990_consen 16 PDKEVLVFVHGYN---NSFEDALRRAAQLAHDLGFPGVVILFSW----PSDGSLLGYFYDRESARFSGPALARFLRDLAR 88 (233)
T ss_pred CCCeEEEEEeCCC---CCHHHHHHHHHHHHHHhCCCceEEEEEc----CCCCChhhhhhhhhhHHHHHHHHHHHHHHHHh
Confidence 5678999999999 44333 3344444443344 6888887 55554211 1 123567777777776
Q ss_pred hCCCCcEEEEEEChhHHHHHHHHHh-cccc-----cccccEEEEecccCchHh
Q 018555 161 KDNSEGVVLLGHSTGCQDIVHYMRA-NAAC-----SRAVRAAIFQAPVSDREY 207 (354)
Q Consensus 161 ~~~~~~~~LvGhS~GG~~a~~~a~~-p~~~-----~~~v~~lIl~~p~~~~~~ 207 (354)
..+.++|+|++||||+.+.+..... .... ..++..+||.+|-.+.+.
T Consensus 89 ~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~d~ 141 (233)
T PF05990_consen 89 APGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDNDV 141 (233)
T ss_pred ccCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCHHH
Confidence 6678999999999999999988765 2221 237889999998776643
No 138
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.60 E-value=6.6e-06 Score=80.08 Aligned_cols=108 Identities=10% Similarity=0.089 Sum_probs=67.9
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHH------------------HHHhhCCcEEEEEcccccCCCCCCCCcc--------
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLA------------------IALDKERWSLVQFLMTSSYTGYGTSSLQ-------- 145 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la------------------~~La~~g~~Via~D~R~~~~G~G~S~~~-------- 145 (354)
...|+||+++|-+ +++..+-.+. ..+. +-.+++.+|++ .|.|.|.-.
T Consensus 75 ~~~Pl~lwlnGGP---G~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~-~~~~~l~iDqP---~G~G~S~~~~~~~~~~~ 147 (462)
T PTZ00472 75 PEAPVLLWMTGGP---GCSSMFALLAENGPCLMNETTGDIYNNTYSWN-NEAYVIYVDQP---AGVGFSYADKADYDHNE 147 (462)
T ss_pred CCCCEEEEECCCC---cHHHHHhhhccCCCeEEeCCCCceeECCcccc-cccCeEEEeCC---CCcCcccCCCCCCCCCh
Confidence 4569999999976 3433321110 0112 13578888874 466665321
Q ss_pred -CcHHHHHHHHHHHHhh---CCCCcEEEEEEChhHHHHHHHHHh-ccc------ccccccEEEEecccCchH
Q 018555 146 -QDAMEIDQLISYLINK---DNSEGVVLLGHSTGCQDIVHYMRA-NAA------CSRAVRAAIFQAPVSDRE 206 (354)
Q Consensus 146 -~~~~dl~~~i~~l~~~---~~~~~~~LvGhS~GG~~a~~~a~~-p~~------~~~~v~~lIl~~p~~~~~ 206 (354)
+.++|+.++++.+.++ +...+++|+||||||..+..+|.+ -+. ....++++++.++..++.
T Consensus 148 ~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~dp~ 219 (462)
T PTZ00472 148 SEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTDPY 219 (462)
T ss_pred HHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccChh
Confidence 2245666666655443 345899999999999999888876 211 124688999988876543
No 139
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.58 E-value=3.1e-06 Score=72.10 Aligned_cols=182 Identities=18% Similarity=0.126 Sum_probs=111.4
Q ss_pred CCcEEEEECCCCCCCCccccHH----HHHHHHhhCCcEEEEEccccc---------CC-------CCCCCC------cc-
Q 018555 93 YQQQVIFIGGLTDGFFATEYLE----PLAIALDKERWSLVQFLMTSS---------YT-------GYGTSS------LQ- 145 (354)
Q Consensus 93 ~~p~vIliHG~~~~~~~~~~~~----~la~~La~~g~~Via~D~R~~---------~~-------G~G~S~------~~- 145 (354)
.++-|||+|||- .+...+. .+.+.|.+ -+.++.+|-... .+ .-+.++ ..
T Consensus 4 ~k~rvLcLHGfr---Qsg~~F~~Ktg~~rK~l~k-~~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~ 79 (230)
T KOG2551|consen 4 KKLRVLCLHGFR---QSGKVFSEKTGSLRKLLKK-LAELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNE 79 (230)
T ss_pred CCceEEEecchh---hccHHHHHHhhhHHHHHHh-hheEEecCCCccCCcccCCcccccccccCCcccccchhhhhcccc
Confidence 467899999998 5555543 34445554 377777776310 00 000010 00
Q ss_pred -------CcHHHHHHHHHHHHhhCCCCcE-EEEEEChhHHHHHHHHHh---c--ccccccccEEEEecccCchHhhhcch
Q 018555 146 -------QDAMEIDQLISYLINKDNSEGV-VLLGHSTGCQDIVHYMRA---N--AACSRAVRAAIFQAPVSDREYRATLP 212 (354)
Q Consensus 146 -------~~~~dl~~~i~~l~~~~~~~~~-~LvGhS~GG~~a~~~a~~---p--~~~~~~v~~lIl~~p~~~~~~~~~~~ 212 (354)
..-+.++-+.+++.+. .++ -|+|.|.|+.++..++.. . ....+.++-+|+++........
T Consensus 80 ~~~~~~~~~eesl~yl~~~i~en---GPFDGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~---- 152 (230)
T KOG2551|consen 80 ASFTEYFGFEESLEYLEDYIKEN---GPFDGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSKK---- 152 (230)
T ss_pred cccccccChHHHHHHHHHHHHHh---CCCccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcch----
Confidence 0123366677777653 333 599999999999888873 1 1233456666766654332100
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcchHHHHhhhhcccCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCC
Q 018555 213 ETAAMIDLASSMIREGRGSELMPREADPCSPITAQRYHSLCAYMGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADE 292 (354)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~ 292 (354)
+ +-......|++ |.|-|.|+.|.
T Consensus 153 ------------------------------------~--------------------~~~~~~~~i~~-PSLHi~G~~D~ 175 (230)
T KOG2551|consen 153 ------------------------------------L--------------------DESAYKRPLST-PSLHIFGETDT 175 (230)
T ss_pred ------------------------------------h--------------------hhhhhccCCCC-CeeEEecccce
Confidence 0 00022346788 99999999999
Q ss_pred CCCchhcHHHHHHHHHHHcCCCeEEEecCCCcccCccHHHHHHHHHHHHHhhCCCCC
Q 018555 293 YVPEYVDKKALVERLCRAMGGAEKVEIEHGIHSLSNRVKEAVQAIIDFVKREGPKGW 349 (354)
Q Consensus 293 ~vp~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~~p~~~~~~i~~Fl~~~~~~~~ 349 (354)
++|.. ..+.+.+.++++ .++.-.+||++-. ...+.+.|.+||.....+.|
T Consensus 176 iv~~~-----~s~~L~~~~~~a-~vl~HpggH~VP~-~~~~~~~i~~fi~~~~~~~~ 225 (230)
T KOG2551|consen 176 IVPSE-----RSEQLAESFKDA-TVLEHPGGHIVPN-KAKYKEKIADFIQSFLQEES 225 (230)
T ss_pred eecch-----HHHHHHHhcCCC-eEEecCCCccCCC-chHHHHHHHHHHHHHHHhhh
Confidence 99987 677888888888 5556678999932 12677777788776654444
No 140
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.58 E-value=9.5e-07 Score=78.66 Aligned_cols=40 Identities=15% Similarity=0.168 Sum_probs=36.3
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccc
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTS 134 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~ 134 (354)
++-|+|||.||+| ++...+..++..|+.+||-|.++.+|.
T Consensus 116 ~k~PvvvFSHGLg---gsRt~YSa~c~~LAShG~VVaavEHRD 155 (399)
T KOG3847|consen 116 DKYPVVVFSHGLG---GSRTLYSAYCTSLASHGFVVAAVEHRD 155 (399)
T ss_pred CCccEEEEecccc---cchhhHHHHhhhHhhCceEEEEeeccc
Confidence 4559999999999 788889999999999999999999984
No 141
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.57 E-value=7e-07 Score=77.93 Aligned_cols=164 Identities=16% Similarity=0.212 Sum_probs=76.3
Q ss_pred CCcEEEEECCCCCCCCccccHHHHHH----HHhhCCcEEEEEcccccC---CCCCCC--------------------Cc-
Q 018555 93 YQQQVIFIGGLTDGFFATEYLEPLAI----ALDKERWSLVQFLMTSSY---TGYGTS--------------------SL- 144 (354)
Q Consensus 93 ~~p~vIliHG~~~~~~~~~~~~~la~----~La~~g~~Via~D~R~~~---~G~G~S--------------------~~- 144 (354)
.++-|||+||++ .+...++.... .|.+.++..+.+|-.-.. .|.... ..
T Consensus 3 ~k~riLcLHG~~---~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 79 (212)
T PF03959_consen 3 RKPRILCLHGYG---QNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDD 79 (212)
T ss_dssp ---EEEEE--TT-----HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-
T ss_pred CCceEEEeCCCC---cCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCC
Confidence 467899999999 78777765444 444337999999864211 111110 00
Q ss_pred cCcHHHHHHHHHHHHhhCC-CCc-EEEEEEChhHHHHHHHHHh-c-cc---ccccccEEEEecccCchHhhhcchhHHHH
Q 018555 145 QQDAMEIDQLISYLINKDN-SEG-VVLLGHSTGCQDIVHYMRA-N-AA---CSRAVRAAIFQAPVSDREYRATLPETAAM 217 (354)
Q Consensus 145 ~~~~~dl~~~i~~l~~~~~-~~~-~~LvGhS~GG~~a~~~a~~-p-~~---~~~~v~~lIl~~p~~~~~~~~~~~~~~~~ 217 (354)
.....++.+.++++.+.+. ..+ .-|+|+|.||.+|..++.. . .. ....++-+|++++.......
T Consensus 80 ~~~~~~~~~sl~~l~~~i~~~GPfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~--------- 150 (212)
T PF03959_consen 80 DHEYEGLDESLDYLRDYIEENGPFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD--------- 150 (212)
T ss_dssp SGGG---HHHHHHHHHHHHHH---SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE----------
T ss_pred cccccCHHHHHHHHHHHHHhcCCeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh---------
Confidence 1113334444444433111 123 5799999999999988865 2 11 22356778887754332100
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCcchHHHHhhhhcccCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCch
Q 018555 218 IDLASSMIREGRGSELMPREADPCSPITAQRYHSLCAYMGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEY 297 (354)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~ 297 (354)
+ ...+ .-.+|++ |+|-|+|++|.+++++
T Consensus 151 -------------------------------~---------~~~~-----------~~~~i~i-PtlHv~G~~D~~~~~~ 178 (212)
T PF03959_consen 151 -------------------------------Y---------QELY-----------DEPKISI-PTLHVIGENDPVVPPE 178 (212)
T ss_dssp -------------------------------G---------TTTT-------------TT----EEEEEEETT-SSS-HH
T ss_pred -------------------------------h---------hhhh-----------ccccCCC-CeEEEEeCCCCCcchH
Confidence 0 0000 1123567 9999999999999976
Q ss_pred hcHHHHHHHHHHHcCC-CeEEEecCCCccc
Q 018555 298 VDKKALVERLCRAMGG-AEKVEIEHGIHSL 326 (354)
Q Consensus 298 ~~~~~~~~~~~~~~~~-~~~~~i~~agH~~ 326 (354)
..+.+.+.+.+ .+++.. ++||.+
T Consensus 179 -----~s~~L~~~~~~~~~v~~h-~gGH~v 202 (212)
T PF03959_consen 179 -----RSEALAEMFDPDARVIEH-DGGHHV 202 (212)
T ss_dssp -----HHHHHHHHHHHHEEEEEE-SSSSS-
T ss_pred -----HHHHHHHhccCCcEEEEE-CCCCcC
Confidence 44555555544 445555 567777
No 142
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.55 E-value=2.3e-07 Score=86.12 Aligned_cols=108 Identities=19% Similarity=0.237 Sum_probs=63.5
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHH-Hhh--CCcEEEEEcccccCCCCCCCC------ccCcHHHHHHHHHHHHh--
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIA-LDK--ERWSLVQFLMTSSYTGYGTSS------LQQDAMEIDQLISYLIN-- 160 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~-La~--~g~~Via~D~R~~~~G~G~S~------~~~~~~dl~~~i~~l~~-- 160 (354)
..+|++|++|||.+...+..+...+.+. |.+ .+++||.+|+. .+-.... .......+..++..|.+
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs---~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~~ 145 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWS---RGASNNYPQAVANTRLVGRQLAKFLSFLINNF 145 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-H---HHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcch---hhccccccchhhhHHHHHHHHHHHHHHHHhhc
Confidence 4689999999999654233444556664 454 58999999994 1111110 01113456667777764
Q ss_pred hCCCCcEEEEEEChhHHHHHHHHHhcccccccccEEEEecccC
Q 018555 161 KDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVS 203 (354)
Q Consensus 161 ~~~~~~~~LvGhS~GG~~a~~~a~~p~~~~~~v~~lIl~~p~~ 203 (354)
.+..++++|||||+||.+|-.++..-.. ..+|.+++.++|..
T Consensus 146 g~~~~~ihlIGhSLGAHvaG~aG~~~~~-~~ki~rItgLDPAg 187 (331)
T PF00151_consen 146 GVPPENIHLIGHSLGAHVAGFAGKYLKG-GGKIGRITGLDPAG 187 (331)
T ss_dssp ---GGGEEEEEETCHHHHHHHHHHHTTT----SSEEEEES-B-
T ss_pred CCChhHEEEEeeccchhhhhhhhhhccC-cceeeEEEecCccc
Confidence 3557899999999999999888776211 23789999888754
No 143
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.54 E-value=2.5e-07 Score=85.57 Aligned_cols=101 Identities=14% Similarity=0.173 Sum_probs=64.7
Q ss_pred CCCcEEEEECCCCCCCCcccc------------------HHHHHHHHhhCCcEEEEEcccccCCCCCCCCccC-------
Q 018555 92 DYQQQVIFIGGLTDGFFATEY------------------LEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ------- 146 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~------------------~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~------- 146 (354)
++-|.||++||-+.+ .+. -...+..|+++||-|+++|. .|+|......
T Consensus 113 ~p~PAVL~lHgHg~~---Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~----~g~GER~~~e~~~~~~~ 185 (390)
T PF12715_consen 113 GPFPAVLCLHGHGGG---KEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDA----LGFGERGDMEGAAQGSN 185 (390)
T ss_dssp S-EEEEEEE--TT-----HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE------TTSGGG-SSCCCTTTTS
T ss_pred CCCCEEEEeCCCCCC---cccccCCcccccccchhhccccccHHHHHHhCCCEEEEEcc----ccccccccccccccccc
Confidence 455899999997642 111 12357889999999999999 7888642110
Q ss_pred --------------------cHHHHHHHHHHHHh--hCCCCcEEEEEEChhHHHHHHHHHhcccccccccEEEEecccC
Q 018555 147 --------------------DAMEIDQLISYLIN--KDNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVS 203 (354)
Q Consensus 147 --------------------~~~dl~~~i~~l~~--~~~~~~~~LvGhS~GG~~a~~~a~~p~~~~~~v~~lIl~~p~~ 203 (354)
...|...++++|.. +.+.++|.++|+||||..++.+++..+ +|++.|..+-+.
T Consensus 186 ~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALDd----RIka~v~~~~l~ 260 (390)
T PF12715_consen 186 YDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALDD----RIKATVANGYLC 260 (390)
T ss_dssp --HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH-T----T--EEEEES-B-
T ss_pred hhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcch----hhHhHhhhhhhh
Confidence 02344557788766 456789999999999999999998866 899988766544
No 144
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.51 E-value=6.7e-07 Score=81.37 Aligned_cols=96 Identities=11% Similarity=0.126 Sum_probs=79.0
Q ss_pred CcEEEEECCCCCCCCccccHHHHHHHHhhC---------CcEEEEEcccccCCCCCCCCccC----cHHHHHHHHHHHHh
Q 018555 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKE---------RWSLVQFLMTSSYTGYGTSSLQQ----DAMEIDQLISYLIN 160 (354)
Q Consensus 94 ~p~vIliHG~~~~~~~~~~~~~la~~La~~---------g~~Via~D~R~~~~G~G~S~~~~----~~~dl~~~i~~l~~ 160 (354)
-.+|+++|||+ ++..-+-.++..|.+. -|.||+|-+ +|+|-|+.+. .+...+.++.-|.-
T Consensus 152 v~PlLl~HGwP---Gsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSl----PGygwSd~~sk~GFn~~a~ArvmrkLMl 224 (469)
T KOG2565|consen 152 VKPLLLLHGWP---GSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSL----PGYGWSDAPSKTGFNAAATARVMRKLML 224 (469)
T ss_pred ccceEEecCCC---chHHHHHhhhhhhcCccccCCccceeEEEeccCC----CCcccCcCCccCCccHHHHHHHHHHHHH
Confidence 35899999999 6666666688888764 379999999 8999887553 36677888888888
Q ss_pred hCCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEec
Q 018555 161 KDNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQA 200 (354)
Q Consensus 161 ~~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~ 200 (354)
++|..++.|=|-.||..|+..+|.. |+ +|.|+=+-.
T Consensus 225 RLg~nkffiqGgDwGSiI~snlasLyPe----nV~GlHlnm 261 (469)
T KOG2565|consen 225 RLGYNKFFIQGGDWGSIIGSNLASLYPE----NVLGLHLNM 261 (469)
T ss_pred HhCcceeEeecCchHHHHHHHHHhhcch----hhhHhhhcc
Confidence 8999999999999999999999988 98 888876543
No 145
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.49 E-value=9.7e-07 Score=78.52 Aligned_cols=101 Identities=17% Similarity=0.113 Sum_probs=76.9
Q ss_pred cEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCC-CccCcHHH-HHHHHHHHHhhCCCCcEEEEEE
Q 018555 95 QQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTS-SLQQDAME-IDQLISYLINKDNSEGVVLLGH 172 (354)
Q Consensus 95 p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S-~~~~~~~d-l~~~i~~l~~~~~~~~~~LvGh 172 (354)
|+|.|+|+.+ +....|..|+..|.. .+.|+..+. +|++.- ......++ .+..++.|++.-+-.+++|+||
T Consensus 1 ~pLF~fhp~~---G~~~~~~~L~~~l~~-~~~v~~l~a----~g~~~~~~~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~ 72 (257)
T COG3319 1 PPLFCFHPAG---GSVLAYAPLAAALGP-LLPVYGLQA----PGYGAGEQPFASLDDMAAAYVAAIRRVQPEGPYVLLGW 72 (257)
T ss_pred CCEEEEcCCC---CcHHHHHHHHHHhcc-Cceeecccc----CcccccccccCCHHHHHHHHHHHHHHhCCCCCEEEEee
Confidence 5799999988 677889999999997 599999999 677632 22333444 4456666666556679999999
Q ss_pred ChhHHHHHHHHHh-cccccccccEEEEecccCc
Q 018555 173 STGCQDIVHYMRA-NAACSRAVRAAIFQAPVSD 204 (354)
Q Consensus 173 S~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~ 204 (354)
|+||.+|+..|.+ -. .-..|..|++++++..
T Consensus 73 S~GG~vA~evA~qL~~-~G~~Va~L~llD~~~~ 104 (257)
T COG3319 73 SLGGAVAFEVAAQLEA-QGEEVAFLGLLDAVPP 104 (257)
T ss_pred ccccHHHHHHHHHHHh-CCCeEEEEEEeccCCC
Confidence 9999999999987 22 2237899999887666
No 146
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.46 E-value=1.4e-05 Score=69.12 Aligned_cols=229 Identities=11% Similarity=0.153 Sum_probs=124.1
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhC---CcEEEEEcccccCCCCCCCC---cc----------CcHHHHHHHH
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKE---RWSLVQFLMTSSYTGYGTSS---LQ----------QDAMEIDQLI 155 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~---g~~Via~D~R~~~~G~G~S~---~~----------~~~~dl~~~i 155 (354)
..++.|++|.|.+ +...++.++++.|..+ .+.|+.+-. .||-.-. .+ ...+++..-+
T Consensus 27 ~~~~li~~IpGNP---G~~gFY~~F~~~L~~~l~~r~~~wtIsh----~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKl 99 (301)
T KOG3975|consen 27 EDKPLIVWIPGNP---GLLGFYTEFARHLHLNLIDRLPVWTISH----AGHALMPASLREDHSHTNEEIFSLQDQVDHKL 99 (301)
T ss_pred CCceEEEEecCCC---CchhHHHHHHHHHHHhcccccceeEEec----cccccCCcccccccccccccccchhhHHHHHH
Confidence 5678999999998 6777888888887652 244777655 5554322 11 1134455556
Q ss_pred HHHHhhCC-CCcEEEEEEChhHHHHHHHHHhcccccccccEEEEecccCchHhhhcch----h----HHH----------
Q 018555 156 SYLINKDN-SEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDREYRATLP----E----TAA---------- 216 (354)
Q Consensus 156 ~~l~~~~~-~~~~~LvGhS~GG~~a~~~a~~p~~~~~~v~~lIl~~p~~~~~~~~~~~----~----~~~---------- 216 (354)
+.+++... ..+++++|||-|+++.+...... ...-.|.+.+++-|...+....... . ...
T Consensus 100 aFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~-k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~lt~yi~~ 178 (301)
T KOG3975|consen 100 AFIKEYVPKDRKIYIIGHSIGAYMVLQILPSI-KLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVSLTSYIYW 178 (301)
T ss_pred HHHHHhCCCCCEEEEEecchhHHHHHHHhhhc-ccccceEEEEEecchHHHHhcCCCceEeeeeeeeehhhhheeeeeee
Confidence 66655333 36899999999999999988641 1223678888877754332211100 0 000
Q ss_pred --HHHHHHHHHhc----C--CCCCCCCCCCCCCCcchHHHHhhhhcccCCCccccCCCChHHHHHHhcCCCCCcEEEEee
Q 018555 217 --MIDLASSMIRE----G--RGSELMPREADPCSPITAQRYHSLCAYMGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFS 288 (354)
Q Consensus 217 --~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G 288 (354)
+....+.++.+ + .+.+++........+...+...- .+...+ +.-.....+.+.+-.+ -+-+..|
T Consensus 179 ~~lp~~ir~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~----la~qEm---~eV~~~d~e~~een~d-~l~Fyyg 250 (301)
T KOG3975|consen 179 ILLPGFIRFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVG----LAAQEM---EEVTTRDIEYCEENLD-SLWFYYG 250 (301)
T ss_pred ecChHHHHHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhh----hchHHH---HHHHHhHHHHHHhcCc-EEEEEcc
Confidence 00011111100 0 00000000000000000000000 000000 0000111123344456 7889999
Q ss_pred CCCCCCCchhcHHHHHHHHHHHcCCCeEEE-ecCCCccc-CccHHHHHHHHHHHH
Q 018555 289 MADEYVPEYVDKKALVERLCRAMGGAEKVE-IEHGIHSL-SNRVKEAVQAIIDFV 341 (354)
Q Consensus 289 ~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~-i~~agH~~-~~~p~~~~~~i~~Fl 341 (354)
..|..||.. ..+.+++.+|..++.+ .+++.|.+ ..+.+..++.+.+.+
T Consensus 251 t~DgW~p~~-----~~d~~kdd~~eed~~Ldedki~HAFV~~~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 251 TNDGWVPSH-----YYDYYKDDVPEEDLKLDEDKIPHAFVVKHAQYMANAVFDMI 300 (301)
T ss_pred CCCCCcchH-----HHHHHhhhcchhceeeccccCCcceeecccHHHHHHHHHhh
Confidence 999999987 8888898888755543 48899999 778888888887765
No 147
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=98.40 E-value=2.3e-06 Score=78.80 Aligned_cols=87 Identities=18% Similarity=0.187 Sum_probs=67.1
Q ss_pred CCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcc-cccCCCCCCCCccCcHHHHHHHHHHHHhhCCCCcEEEEE
Q 018555 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLM-TSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLG 171 (354)
Q Consensus 93 ~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~-R~~~~G~G~S~~~~~~~dl~~~i~~l~~~~~~~~~~LvG 171 (354)
....-||+-|=| +....-+.+++.|+++|+.|+.+|- |=+ |-.-+.+....|+..++++..++.+.++++|+|
T Consensus 259 sd~~av~~SGDG---GWr~lDk~v~~~l~~~gvpVvGvdsLRYf---W~~rtPe~~a~Dl~r~i~~y~~~w~~~~~~liG 332 (456)
T COG3946 259 SDTVAVFYSGDG---GWRDLDKEVAEALQKQGVPVVGVDSLRYF---WSERTPEQIAADLSRLIRFYARRWGAKRVLLIG 332 (456)
T ss_pred cceEEEEEecCC---chhhhhHHHHHHHHHCCCceeeeehhhhh---hccCCHHHHHHHHHHHHHHHHHhhCcceEEEEe
Confidence 456677777755 4555567899999999999999994 422 233344566789999999999888899999999
Q ss_pred EChhHHHHHHHHHh
Q 018555 172 HSTGCQDIVHYMRA 185 (354)
Q Consensus 172 hS~GG~~a~~~a~~ 185 (354)
.|+|+-+--..-.+
T Consensus 333 ySfGADvlP~~~n~ 346 (456)
T COG3946 333 YSFGADVLPFAYNR 346 (456)
T ss_pred ecccchhhHHHHHh
Confidence 99999877655555
No 148
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.39 E-value=3.7e-06 Score=78.26 Aligned_cols=109 Identities=12% Similarity=0.174 Sum_probs=74.6
Q ss_pred CCcEEEEECCCCCCCCccccH-------HHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhhCCCC
Q 018555 93 YQQQVIFIGGLTDGFFATEYL-------EPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSE 165 (354)
Q Consensus 93 ~~p~vIliHG~~~~~~~~~~~-------~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~~~~~ 165 (354)
..|+||++||.| ...... ..+-..|. .-.++.+|+.-.-.+-.....|....++.+..++|.+..|.+
T Consensus 121 ~DpVlIYlHGGG---Y~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~G~~ 195 (374)
T PF10340_consen 121 SDPVLIYLHGGG---YFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESEGNK 195 (374)
T ss_pred CCcEEEEEcCCe---eEecCCHHHHHHHHHHHHHcC--CCeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhccCCC
Confidence 469999999966 333322 22333344 458999998310000012346777888888899998767889
Q ss_pred cEEEEEEChhHHHHHHHHHh-cc-cccccccEEEEecccCchH
Q 018555 166 GVVLLGHSTGCQDIVHYMRA-NA-ACSRAVRAAIFQAPVSDRE 206 (354)
Q Consensus 166 ~~~LvGhS~GG~~a~~~a~~-p~-~~~~~v~~lIl~~p~~~~~ 206 (354)
.++|+|-|.||.+++.++.. .. .....-+++||++|+....
T Consensus 196 nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 196 NIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred eEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 99999999999999988765 21 2223468999999987654
No 149
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.39 E-value=4e-06 Score=73.00 Aligned_cols=61 Identities=26% Similarity=0.303 Sum_probs=54.3
Q ss_pred EEEEeeCCCCCCCchhcHHHHHHHHHHHcCCCeEEEecCCCccc--CccHHHHHHHHHHHHHhhCCCCC
Q 018555 283 CQVIFSMADEYVPEYVDKKALVERLCRAMGGAEKVEIEHGIHSL--SNRVKEAVQAIIDFVKREGPKGW 349 (354)
Q Consensus 283 vLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~--~~~p~~~~~~i~~Fl~~~~~~~~ 349 (354)
++++.+.+|.++|.. ....+++..|++++..++ +||.. +-+.++|.++|.+-|.++.++.|
T Consensus 309 ~ivv~A~~D~Yipr~-----gv~~lQ~~WPg~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R~~kes~ 371 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRT-----GVRSLQEIWPGCEVRYLE-GGHVSAYLFKQDLFRRAIVDGLDRLDKESW 371 (371)
T ss_pred EEEEEecCCcccccc-----CcHHHHHhCCCCEEEEee-cCceeeeehhchHHHHHHHHHHHhhhhccC
Confidence 568899999999987 678888999999999998 79998 57889999999999999988776
No 150
>PLN02606 palmitoyl-protein thioesterase
Probab=98.34 E-value=0.00013 Score=65.97 Aligned_cols=234 Identities=12% Similarity=0.140 Sum_probs=122.8
Q ss_pred CCcEEEEECCCCCCCCccccHHHHHHHHhh-CCcEEEEEcccccCCCCCC-CCc-cCcHHHHHHHHHHHHh--hCCCCcE
Q 018555 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDK-ERWSLVQFLMTSSYTGYGT-SSL-QQDAMEIDQLISYLIN--KDNSEGV 167 (354)
Q Consensus 93 ~~p~vIliHG~~~~~~~~~~~~~la~~La~-~g~~Via~D~R~~~~G~G~-S~~-~~~~~dl~~~i~~l~~--~~~~~~~ 167 (354)
...+||+.||+||... ..-+..+.+.+.+ .|+.+..+-+ |-+. .+. -...++++.+-+.|.. ++ ..-+
T Consensus 25 ~~~PvViwHGlgD~~~-~~~~~~~~~~i~~~~~~pg~~v~i-----g~~~~~s~~~~~~~Qv~~vce~l~~~~~L-~~G~ 97 (306)
T PLN02606 25 LSVPFVLFHGFGGECS-NGKVSNLTQFLINHSGYPGTCVEI-----GNGVQDSLFMPLRQQASIACEKIKQMKEL-SEGY 97 (306)
T ss_pred CCCCEEEECCCCcccC-CchHHHHHHHHHhCCCCCeEEEEE-----CCCcccccccCHHHHHHHHHHHHhcchhh-cCce
Confidence 4568999999998754 3467778777753 3676666655 2232 222 3333455555555544 22 2469
Q ss_pred EEEEEChhHHHHHHHHHh-cccccccccEEEEecccCc-hHhhhc-chhHHHHHHHHHHHHh---cC-CCCCCCCCCCCC
Q 018555 168 VLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSD-REYRAT-LPETAAMIDLASSMIR---EG-RGSELMPREADP 240 (354)
Q Consensus 168 ~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~-~~~~~~-~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~ 240 (354)
.+||+|.||.++-.++.+ |+ .+.|+-+|-++..-. ...... ... .+-+.+.++.. .. -.+.+.+..+.
T Consensus 98 naIGfSQGglflRa~ierc~~--~p~V~nlISlggph~Gv~g~p~~C~~--~~C~~~~~l~~~~Ys~~vQ~~lv~AqYw- 172 (306)
T PLN02606 98 NIVAESQGNLVARGLIEFCDN--APPVINYVSLGGPHAGVAAIPKGCNS--TFCELLKAVFAVIYTDFAQDHTAPSGYV- 172 (306)
T ss_pred EEEEEcchhHHHHHHHHHCCC--CCCcceEEEecCCcCCcccCcccchh--hHhHHHHHHHHhhhHHHHhccEeccccc-
Confidence 999999999999999988 43 136999998754211 100000 000 01111111111 10 11123333322
Q ss_pred CCcchHHHHhhhhcccCCCccccCCC---ChHHHHHHhcCCCCCcEEEEeeCCCCCC-Cchhc-----------------
Q 018555 241 CSPITAQRYHSLCAYMGDDDMFSSDL---SDDQLKQRLGHMANTPCQVIFSMADEYV-PEYVD----------------- 299 (354)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~l~~i~~~PvLvi~G~~D~~v-p~~~~----------------- 299 (354)
..|.....|.+...- ..+ +++.. ..+..++.+.++.. ..+|.+++|.+| |.+..
T Consensus 173 rDP~~~~~Yl~~s~F--Lad-INNEr~~~~n~tYk~n~~~L~~--~Vlv~f~~DtvV~PkeSswFg~y~~~~~~~vipl~ 247 (306)
T PLN02606 173 KKPMEIKNYLEHSKY--LPK-LNNERPGERNPTFKDRFTSLHN--LVLVMFQGDTVLIPRETSWFGYYPDGASTPLLSPQ 247 (306)
T ss_pred cCcchHHHHHHhCcc--hhh-hcCcCcccccHHHHHHHHHhhc--eEEEEeCCCceECCCccccceecCCCCCceeecch
Confidence 344444444432111 011 12221 23556778888864 455566666555 44310
Q ss_pred -HH------HHHHHHHHHcCCCeEEEecCCCcccCccHHHHHHHHHHHHHhhCC
Q 018555 300 -KK------ALVERLCRAMGGAEKVEIEHGIHSLSNRVKEAVQAIIDFVKREGP 346 (354)
Q Consensus 300 -~~------~~~~~~~~~~~~~~~~~i~~agH~~~~~p~~~~~~i~~Fl~~~~~ 346 (354)
.. ...+.+ ..-....++.++| .|+-. ..+.|.+.|..||.+...
T Consensus 248 e~~lY~eD~iGLktL-d~~Gkl~f~~v~G-~Hl~~-~~~~~~~~i~pyL~~~~~ 298 (306)
T PLN02606 248 STKLYTEDWIGLKTL-DDAGKVKFISVPG-GHIEI-AEEDLVKYVVPYLQNESA 298 (306)
T ss_pred hccchhhcchhHHHH-HHCCCeEEEecCC-chhee-cHHHHHHHHHHHhccCCc
Confidence 00 011122 1223456778888 99887 466889999999986543
No 151
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.32 E-value=2.1e-06 Score=80.14 Aligned_cols=102 Identities=22% Similarity=0.326 Sum_probs=77.9
Q ss_pred CCcEEEEECCCCCCCCccccHHHHHHHHhhCCcE---EEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhhCCCCcEEE
Q 018555 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWS---LVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVL 169 (354)
Q Consensus 93 ~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~---Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~~~~~~~~L 169 (354)
..-++||+||++ .....|..+...+...||. ++.+++. .+.+..+.....+.+...|+.+....+.+++.|
T Consensus 58 ~~~pivlVhG~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~ql~~~V~~~l~~~ga~~v~L 131 (336)
T COG1075 58 AKEPIVLVHGLG---GGYGNFLPLDYRLAILGWLTNGVYAFELS---GGDGTYSLAVRGEQLFAYVDEVLAKTGAKKVNL 131 (336)
T ss_pred CCceEEEEccCc---CCcchhhhhhhhhcchHHHhccccccccc---ccCCCccccccHHHHHHHHHHHHhhcCCCceEE
Confidence 456999999987 6777788888888888888 9999984 122333344456677777777777778899999
Q ss_pred EEEChhHHHHHHHHHh-cccccccccEEEEeccc
Q 018555 170 LGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPV 202 (354)
Q Consensus 170 vGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~ 202 (354)
+||||||.++..|+.. +. ..+|+.++.+++.
T Consensus 132 igHS~GG~~~ry~~~~~~~--~~~V~~~~tl~tp 163 (336)
T COG1075 132 IGHSMGGLDSRYYLGVLGG--ANRVASVVTLGTP 163 (336)
T ss_pred EeecccchhhHHHHhhcCc--cceEEEEEEeccC
Confidence 9999999999988877 51 1289999988754
No 152
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.30 E-value=1.8e-05 Score=66.94 Aligned_cols=178 Identities=17% Similarity=0.066 Sum_probs=101.8
Q ss_pred CcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEccccc----CCCCCCC----------CccCcH-------HHHH
Q 018555 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSS----YTGYGTS----------SLQQDA-------MEID 152 (354)
Q Consensus 94 ~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~----~~G~G~S----------~~~~~~-------~dl~ 152 (354)
..+||++||+++ +..-|.++++.|.-.+..-|.|..... -.|.+.. +.+++. +.+.
T Consensus 3 ~atIi~LHglGD---sg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~ 79 (206)
T KOG2112|consen 3 TATIIFLHGLGD---SGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIA 79 (206)
T ss_pred eEEEEEEecCCC---CCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHH
Confidence 458999999994 445577777777766778888854210 0111110 111122 2233
Q ss_pred HHHHHHHh-hCCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhhcchhHHHHHHHHHHHHhcCCC
Q 018555 153 QLISYLIN-KDNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLASSMIREGRG 230 (354)
Q Consensus 153 ~~i~~l~~-~~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (354)
.++++... -....++.+-|.||||.++++.+.. +. .+.++.-..+...+...
T Consensus 80 ~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~----~l~G~~~~s~~~p~~~~---------------------- 133 (206)
T KOG2112|consen 80 NLIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPK----ALGGIFALSGFLPRASI---------------------- 133 (206)
T ss_pred HHHHHHHHcCCCccceeEcccCchHHHHHHHHhcccc----ccceeeccccccccchh----------------------
Confidence 33333322 1345689999999999999999887 55 66666644432221000
Q ss_pred CCCCCCCCCCCCcchHHHHhhhhcccCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHH
Q 018555 231 SELMPREADPCSPITAQRYHSLCAYMGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRA 310 (354)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~ 310 (354)
.++.. . .. .. .. |++..||+.|++||..- .++..+.+...
T Consensus 134 --~~~~~------------~-----~~-----------------~~--~~-~i~~~Hg~~d~~vp~~~-g~~s~~~l~~~ 173 (206)
T KOG2112|consen 134 --GLPGW------------L-----PG-----------------VN--YT-PILLCHGTADPLVPFRF-GEKSAQFLKSL 173 (206)
T ss_pred --hccCC------------c-----cc-----------------cC--cc-hhheecccCCceeehHH-HHHHHHHHHHc
Confidence 00000 0 00 00 23 99999999999999862 22234444444
Q ss_pred cCCCeEEEecCCCcccCccHHHHHHHHHHHHHh
Q 018555 311 MGGAEKVEIEHGIHSLSNRVKEAVQAIIDFVKR 343 (354)
Q Consensus 311 ~~~~~~~~i~~agH~~~~~p~~~~~~i~~Fl~~ 343 (354)
....++..+++-+|... ++++ +.+..|+..
T Consensus 174 ~~~~~f~~y~g~~h~~~--~~e~-~~~~~~~~~ 203 (206)
T KOG2112|consen 174 GVRVTFKPYPGLGHSTS--PQEL-DDLKSWIKT 203 (206)
T ss_pred CCceeeeecCCcccccc--HHHH-HHHHHHHHH
Confidence 44478889999999982 2332 233445544
No 153
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.30 E-value=2.2e-05 Score=67.42 Aligned_cols=88 Identities=18% Similarity=0.204 Sum_probs=61.4
Q ss_pred ccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCc-cCcHHHHHH-HHHHHHhhCCCCcEEEEEEChhHHHHHHHHHh-
Q 018555 109 ATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSL-QQDAMEIDQ-LISYLINKDNSEGVVLLGHSTGCQDIVHYMRA- 185 (354)
Q Consensus 109 ~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~-~~~~~dl~~-~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~- 185 (354)
....|..++..|.. .+.|+++|+ +|++.+.. ....+++.. .++.+....+..+++++|||+||.++...+.+
T Consensus 11 ~~~~~~~~~~~l~~-~~~v~~~~~----~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~~l 85 (212)
T smart00824 11 GPHEYARLAAALRG-RRDVSALPL----PGFGPGEPLPASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLAHAVAARL 85 (212)
T ss_pred cHHHHHHHHHhcCC-CccEEEecC----CCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHHHH
Confidence 45568899999986 799999999 78876532 233333332 34444444445789999999999999988876
Q ss_pred cccccccccEEEEeccc
Q 018555 186 NAACSRAVRAAIFQAPV 202 (354)
Q Consensus 186 p~~~~~~v~~lIl~~p~ 202 (354)
... ...+.+++++++.
T Consensus 86 ~~~-~~~~~~l~~~~~~ 101 (212)
T smart00824 86 EAR-GIPPAAVVLLDTY 101 (212)
T ss_pred HhC-CCCCcEEEEEccC
Confidence 321 1268889887653
No 154
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.29 E-value=2.7e-06 Score=76.67 Aligned_cols=101 Identities=20% Similarity=0.281 Sum_probs=72.6
Q ss_pred CCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCc----cCcHHHHHHHHHHHHhhCC--CCc
Q 018555 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSL----QQDAMEIDQLISYLINKDN--SEG 166 (354)
Q Consensus 93 ~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~----~~~~~dl~~~i~~l~~~~~--~~~ 166 (354)
.+..|||.-|.. |+.... -+...++ .||.|+..++ +||+.|+- ......+.+++++....++ .+.
T Consensus 242 gq~LvIC~EGNA-GFYEvG---~m~tP~~-lgYsvLGwNh----PGFagSTG~P~p~n~~nA~DaVvQfAI~~Lgf~~ed 312 (517)
T KOG1553|consen 242 GQDLVICFEGNA-GFYEVG---VMNTPAQ-LGYSVLGWNH----PGFAGSTGLPYPVNTLNAADAVVQFAIQVLGFRQED 312 (517)
T ss_pred CceEEEEecCCc-cceEee---eecChHH-hCceeeccCC----CCccccCCCCCcccchHHHHHHHHHHHHHcCCCccc
Confidence 356788888855 222221 1233333 6999999999 89998862 2345566677777777554 578
Q ss_pred EEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHh
Q 018555 167 VVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREY 207 (354)
Q Consensus 167 ~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~ 207 (354)
++|.|+|.||..+..+|.. | .|+++||.+...+...
T Consensus 313 IilygWSIGGF~~~waAs~YP-----dVkavvLDAtFDDllp 349 (517)
T KOG1553|consen 313 IILYGWSIGGFPVAWAASNYP-----DVKAVVLDATFDDLLP 349 (517)
T ss_pred eEEEEeecCCchHHHHhhcCC-----CceEEEeecchhhhhh
Confidence 9999999999999888877 6 5999999887766543
No 155
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.27 E-value=5.2e-05 Score=69.00 Aligned_cols=95 Identities=15% Similarity=0.210 Sum_probs=65.6
Q ss_pred eeEEEecCCCCcEEEEECCCCCCCCcccc--H-----HHHHHHHhhCCcEEEEEcccccCCCCCCCCc----cCcHHHHH
Q 018555 84 VQVAFKTGDYQQQVIFIGGLTDGFFATEY--L-----EPLAIALDKERWSLVQFLMTSSYTGYGTSSL----QQDAMEID 152 (354)
Q Consensus 84 ~~~~~~~~~~~p~vIliHG~~~~~~~~~~--~-----~~la~~La~~g~~Via~D~R~~~~G~G~S~~----~~~~~dl~ 152 (354)
..+.+........||+.-|.+ ...+. . ..+.+...+.+-+|+.+++ +|.|.|+- .+.+.|..
T Consensus 127 ~~I~~~~a~~~RWiL~s~GNg---~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNY----pGVg~S~G~~s~~dLv~~~~ 199 (365)
T PF05677_consen 127 MAIHQPEAKPQRWILVSNGNG---ECYENRAMLDYKDDWIQRFAKELGANVLVFNY----PGVGSSTGPPSRKDLVKDYQ 199 (365)
T ss_pred EEeeCCCCCCCcEEEEEcCCh---HHhhhhhhhccccHHHHHHHHHcCCcEEEECC----CccccCCCCCCHHHHHHHHH
Confidence 334433445678999999987 33333 0 2233333346889999999 67777753 34567888
Q ss_pred HHHHHHHhh-C--CCCcEEEEEEChhHHHHHHHHHh
Q 018555 153 QLISYLINK-D--NSEGVVLLGHSTGCQDIVHYMRA 185 (354)
Q Consensus 153 ~~i~~l~~~-~--~~~~~~LvGhS~GG~~a~~~a~~ 185 (354)
+++++|+++ . +.+++++.|||+||.++.+.+.+
T Consensus 200 a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~ 235 (365)
T PF05677_consen 200 ACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKK 235 (365)
T ss_pred HHHHHHHhcccCCChheEEEeeccccHHHHHHHHHh
Confidence 999999863 2 34789999999999998876554
No 156
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.25 E-value=6e-06 Score=75.43 Aligned_cols=111 Identities=19% Similarity=0.315 Sum_probs=74.3
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCC--------CCccCcHHHHHHHHHHHHhhCC
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGT--------SSLQQDAMEIDQLISYLINKDN 163 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~--------S~~~~~~~dl~~~i~~l~~~~~ 163 (354)
..+.++||+||+..++.+. -...++.+...|+..+.+=+ +|+.-|. .+......+++.++.+|.+..+
T Consensus 114 ~~k~vlvFvHGfNntf~da--v~R~aqI~~d~g~~~~pVvF--SWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~ 189 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDA--VYRTAQIVHDSGNDGVPVVF--SWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKP 189 (377)
T ss_pred CCCeEEEEEcccCCchhHH--HHHHHHHHhhcCCCcceEEE--EcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCC
Confidence 4578999999999443222 34456655555554444333 3344332 1223345789999999999888
Q ss_pred CCcEEEEEEChhHHHHHHHHHh----ccc-ccccccEEEEecccCchH
Q 018555 164 SEGVVLLGHSTGCQDIVHYMRA----NAA-CSRAVRAAIFQAPVSDRE 206 (354)
Q Consensus 164 ~~~~~LvGhS~GG~~a~~~a~~----p~~-~~~~v~~lIl~~p~~~~~ 206 (354)
.++++|++||||.+++++.... +.. ...+++-+||-+|-.+.+
T Consensus 190 ~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~D 237 (377)
T COG4782 190 VKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDVD 237 (377)
T ss_pred CceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCChh
Confidence 8999999999999999888764 221 234678888888866554
No 157
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.24 E-value=1.1e-05 Score=71.53 Aligned_cols=99 Identities=17% Similarity=0.111 Sum_probs=57.9
Q ss_pred cEEEEECCCCCCCCccccHHHHHH-------HHhhCCcEEEEEcccccCCCCCCCCc--cCcHHHHHHHHH-HHHhhC--
Q 018555 95 QQVIFIGGLTDGFFATEYLEPLAI-------ALDKERWSLVQFLMTSSYTGYGTSSL--QQDAMEIDQLIS-YLINKD-- 162 (354)
Q Consensus 95 p~vIliHG~~~~~~~~~~~~~la~-------~La~~g~~Via~D~R~~~~G~G~S~~--~~~~~dl~~~i~-~l~~~~-- 162 (354)
|.|||+||-|.+ .......+.. ...+-+|-|++|.+- .=+-.++. ........++++ .|..++
T Consensus 192 PLvlfLHgagq~--g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~---~if~d~e~~t~~~l~~~idli~~vlas~ynI 266 (387)
T COG4099 192 PLVLFLHGAGQG--GSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYN---PIFADSEEKTLLYLIEKIDLILEVLASTYNI 266 (387)
T ss_pred cEEEEEecCCCC--CchhhhhhhcCccceeeecccCceEEEccccc---ccccccccccchhHHHHHHHHHHHHhhccCc
Confidence 899999997753 2222222221 222224455555541 11222222 111222333333 444444
Q ss_pred CCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEeccc
Q 018555 163 NSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPV 202 (354)
Q Consensus 163 ~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~ 202 (354)
+..+++++|.|+||+.++.++.+ |+ .+.+.++++.-
T Consensus 267 D~sRIYviGlSrG~~gt~al~~kfPd----fFAaa~~iaG~ 303 (387)
T COG4099 267 DRSRIYVIGLSRGGFGTWALAEKFPD----FFAAAVPIAGG 303 (387)
T ss_pred ccceEEEEeecCcchhhHHHHHhCch----hhheeeeecCC
Confidence 45689999999999999999988 98 88888887653
No 158
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.16 E-value=0.0004 Score=62.85 Aligned_cols=101 Identities=15% Similarity=0.090 Sum_probs=64.4
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhh-CCcEEEEEcccccCCCCCC-CC-ccCcHHHHHHHHHHHHh--hCCCCc
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDK-ERWSLVQFLMTSSYTGYGT-SS-LQQDAMEIDQLISYLIN--KDNSEG 166 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~-~g~~Via~D~R~~~~G~G~-S~-~~~~~~dl~~~i~~l~~--~~~~~~ 166 (354)
....+||+.||+||...+. -...+.+.+.+ -|..|+.+.. |-+. .+ +....++++.+-+.+.. ++ ..-
T Consensus 23 ~~~~P~ViwHG~GD~c~~~-g~~~~~~l~~~~~g~~~~~i~i-----g~~~~~s~~~~~~~Qve~vce~l~~~~~l-~~G 95 (314)
T PLN02633 23 SVSVPFIMLHGIGTQCSDA-TNANFTQLLTNLSGSPGFCLEI-----GNGVGDSWLMPLTQQAEIACEKVKQMKEL-SQG 95 (314)
T ss_pred cCCCCeEEecCCCcccCCc-hHHHHHHHHHhCCCCceEEEEE-----CCCccccceeCHHHHHHHHHHHHhhchhh-hCc
Confidence 4567899999999875443 45556665543 3677777766 3221 11 22223444444444443 22 245
Q ss_pred EEEEEEChhHHHHHHHHHh-cccccccccEEEEecc
Q 018555 167 VVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAP 201 (354)
Q Consensus 167 ~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p 201 (354)
+.+||+|.||.++-.++.+ ++ .+.|+-+|-++.
T Consensus 96 ~naIGfSQGGlflRa~ierc~~--~p~V~nlISlgg 129 (314)
T PLN02633 96 YNIVGRSQGNLVARGLIEFCDG--GPPVYNYISLAG 129 (314)
T ss_pred EEEEEEccchHHHHHHHHHCCC--CCCcceEEEecC
Confidence 9999999999999999988 43 136999998764
No 159
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.09 E-value=5.1e-05 Score=67.47 Aligned_cols=63 Identities=19% Similarity=0.158 Sum_probs=52.1
Q ss_pred CCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCCeEEEecCCCccc--CccHHHHHHHHHHHH
Q 018555 277 HMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGGAEKVEIEHGIHSL--SNRVKEAVQAIIDFV 341 (354)
Q Consensus 277 ~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~--~~~p~~~~~~i~~Fl 341 (354)
...+ |-|+|.++.|.++|.+ +.++++++.++..-..+.+.+++..|.. ..+|++..++|.+|+
T Consensus 176 ~~~~-p~lylYS~~D~l~~~~-~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 176 PSRC-PRLYLYSKADPLIPWR-DVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCC-CeEEecCCCCcCcCHH-HHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 4557 9999999999999976 5666777777755557778899999999 479999999999885
No 160
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.05 E-value=1.1e-05 Score=70.65 Aligned_cols=88 Identities=15% Similarity=0.109 Sum_probs=44.7
Q ss_pred CCcEEEEECCCCCCCCccccHHHHHHHHhh--CCcEEEEEcccccCCCCCCCCccCcHHH-HHHHHHHHHh---hCC--C
Q 018555 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDK--ERWSLVQFLMTSSYTGYGTSSLQQDAME-IDQLISYLIN---KDN--S 164 (354)
Q Consensus 93 ~~p~vIliHG~~~~~~~~~~~~~la~~La~--~g~~Via~D~R~~~~G~G~S~~~~~~~d-l~~~i~~l~~---~~~--~ 164 (354)
+...|||+||+. ++...|..+.+.|.. ..+.-..+...+.....+.+ . +.++. ...+++++.+ ... .
T Consensus 3 ~~hLvV~vHGL~---G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~T-~-~gI~~~g~rL~~eI~~~~~~~~~~~ 77 (217)
T PF05057_consen 3 PVHLVVFVHGLW---GNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEFKT-F-DGIDVCGERLAEEILEHIKDYESKI 77 (217)
T ss_pred CCEEEEEeCCCC---CCHHHHHHHHHHHHHhhhhcchhhhhhhccccccccc-c-hhhHHHHHHHHHHHHHhcccccccc
Confidence 456899999999 555566666666654 12211111110000011111 1 11211 1123333332 122 3
Q ss_pred CcEEEEEEChhHHHHHHHHHh
Q 018555 165 EGVVLLGHSTGCQDIVHYMRA 185 (354)
Q Consensus 165 ~~~~LvGhS~GG~~a~~~a~~ 185 (354)
.++++|||||||.++-.+...
T Consensus 78 ~~IsfIgHSLGGli~r~al~~ 98 (217)
T PF05057_consen 78 RKISFIGHSLGGLIARYALGL 98 (217)
T ss_pred ccceEEEecccHHHHHHHHHH
Confidence 589999999999998766554
No 161
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.04 E-value=5.5e-05 Score=67.45 Aligned_cols=104 Identities=16% Similarity=0.097 Sum_probs=72.0
Q ss_pred CCCcEEEEECCCCCCC---CccccHHHHHHHHhhCCcEEEEEcc-cccC--CCCCCC----Ccc---CcHHHHHHHHHHH
Q 018555 92 DYQQQVIFIGGLTDGF---FATEYLEPLAIALDKERWSLVQFLM-TSSY--TGYGTS----SLQ---QDAMEIDQLISYL 158 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~---~~~~~~~~la~~La~~g~~Via~D~-R~~~--~G~G~S----~~~---~~~~dl~~~i~~l 158 (354)
...|.||++||-+... ....-|+.+++. +||-|+.+|. ...| .+++.+ +.. +++..|.++++.|
T Consensus 59 ~~apLvv~LHG~~~sgag~~~~sg~d~lAd~---~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g~ddVgflr~lva~l 135 (312)
T COG3509 59 SGAPLVVVLHGSGGSGAGQLHGTGWDALADR---EGFLVAYPDGYDRAWNANGCGNWFGPADRRRGVDDVGFLRALVAKL 135 (312)
T ss_pred CCCCEEEEEecCCCChHHhhcccchhhhhcc---cCcEEECcCccccccCCCcccccCCcccccCCccHHHHHHHHHHHH
Confidence 4458999999966211 111225555443 6999999964 3333 344444 222 3456788888998
Q ss_pred HhhCCCC--cEEEEEEChhHHHHHHHHHh-cccccccccEEEEeccc
Q 018555 159 INKDNSE--GVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPV 202 (354)
Q Consensus 159 ~~~~~~~--~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~ 202 (354)
..+++++ +|++.|.|-||.++..++.. |+ .+.++-.++..
T Consensus 136 ~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~----~faa~A~VAg~ 178 (312)
T COG3509 136 VNEYGIDPARVYVTGLSNGGRMANRLACEYPD----IFAAIAPVAGL 178 (312)
T ss_pred HHhcCcCcceEEEEeeCcHHHHHHHHHhcCcc----cccceeeeecc
Confidence 8887766 89999999999999999999 88 77777665543
No 162
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.01 E-value=1.5e-05 Score=75.95 Aligned_cols=86 Identities=17% Similarity=0.174 Sum_probs=63.5
Q ss_pred cHHHHHHHHhhCCcEE----E-E-EcccccCCCCCCCCccCcHHHHHHHHHHHHhhCCCCcEEEEEEChhHHHHHHHHHh
Q 018555 112 YLEPLAIALDKERWSL----V-Q-FLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRA 185 (354)
Q Consensus 112 ~~~~la~~La~~g~~V----i-a-~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~ 185 (354)
+|..+++.|.+.||.. + + +|.| .+.. ........+..+|+.+.+.- .++++||||||||.++..+...
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR---~~~~--~~~~~~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~fl~~ 139 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWR---LSPA--ERDEYFTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARYFLQW 139 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechh---hchh--hHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHHHHHh
Confidence 7999999999888743 2 2 6887 2222 23344567888888776544 6899999999999999999887
Q ss_pred -ccc--ccccccEEEEecccC
Q 018555 186 -NAA--CSRAVRAAIFQAPVS 203 (354)
Q Consensus 186 -p~~--~~~~v~~lIl~~p~~ 203 (354)
+.. ....|+++|.+++..
T Consensus 140 ~~~~~W~~~~i~~~i~i~~p~ 160 (389)
T PF02450_consen 140 MPQEEWKDKYIKRFISIGTPF 160 (389)
T ss_pred ccchhhHHhhhhEEEEeCCCC
Confidence 433 345799999988643
No 163
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.99 E-value=0.00021 Score=62.80 Aligned_cols=98 Identities=19% Similarity=0.159 Sum_probs=66.1
Q ss_pred cEEEEECCCCCCCCccccHHHHHHHHhh-CCcEEEEEcccccCCCCC--CCCccCcHHHHHHHHHHHHhh-CCCCcEEEE
Q 018555 95 QQVIFIGGLTDGFFATEYLEPLAIALDK-ERWSLVQFLMTSSYTGYG--TSSLQQDAMEIDQLISYLINK-DNSEGVVLL 170 (354)
Q Consensus 95 p~vIliHG~~~~~~~~~~~~~la~~La~-~g~~Via~D~R~~~~G~G--~S~~~~~~~dl~~~i~~l~~~-~~~~~~~Lv 170 (354)
.++|++||+++...+ .-...+.+.+.+ -|..|++.|. |-| .+..-...+.+..+-+.+... .-.+-+.+|
T Consensus 24 ~P~ii~HGigd~c~~-~~~~~~~q~l~~~~g~~v~~lei-----g~g~~~s~l~pl~~Qv~~~ce~v~~m~~lsqGyniv 97 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSS-LSMANLTQLLEELPGSPVYCLEI-----GDGIKDSSLMPLWEQVDVACEKVKQMPELSQGYNIV 97 (296)
T ss_pred CCEEEEeccCccccc-chHHHHHHHHHhCCCCeeEEEEe-----cCCcchhhhccHHHHHHHHHHHHhcchhccCceEEE
Confidence 689999999987655 223444444443 3899999999 555 555444444455455555431 113569999
Q ss_pred EEChhHHHHHHHHHh-cccccccccEEEEecc
Q 018555 171 GHSTGCQDIVHYMRA-NAACSRAVRAAIFQAP 201 (354)
Q Consensus 171 GhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p 201 (354)
|.|.||.++-.++.. ++ +.|+-+|-++.
T Consensus 98 g~SQGglv~Raliq~cd~---ppV~n~ISL~g 126 (296)
T KOG2541|consen 98 GYSQGGLVARALIQFCDN---PPVKNFISLGG 126 (296)
T ss_pred EEccccHHHHHHHHhCCC---CCcceeEeccC
Confidence 999999999998887 32 47888887653
No 164
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=97.94 E-value=0.00055 Score=65.73 Aligned_cols=101 Identities=11% Similarity=0.008 Sum_probs=60.1
Q ss_pred CCcEEEEECCCCCCCCccccHHHHHHHHhhCCc----EEEEEcccccCCCCCCC-CccCc---HHH-HHHHHHHHHhhC-
Q 018555 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERW----SLVQFLMTSSYTGYGTS-SLQQD---AME-IDQLISYLINKD- 162 (354)
Q Consensus 93 ~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~----~Via~D~R~~~~G~G~S-~~~~~---~~d-l~~~i~~l~~~~- 162 (354)
.-|+|+|+||-.-. .....+. ++..|.++|. -++.+|.- .+..+. ..+.. .+. ..+++-++.+.+
T Consensus 208 ~~PvlyllDG~~w~-~~~~~~~-~ld~li~~g~i~P~ivV~id~~---~~~~R~~el~~~~~f~~~l~~eLlP~I~~~y~ 282 (411)
T PRK10439 208 ERPLAILLDGQFWA-ESMPVWP-ALDSLTHRGQLPPAVYLLIDAI---DTTHRSQELPCNADFWLAVQQELLPQVRAIAP 282 (411)
T ss_pred CCCEEEEEECHHhh-hcCCHHH-HHHHHHHcCCCCceEEEEECCC---CcccccccCCchHHHHHHHHHHHHHHHHHhCC
Confidence 45899999994411 1112233 3444444453 46777752 111111 11111 111 234445554433
Q ss_pred ---CCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEeccc
Q 018555 163 ---NSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPV 202 (354)
Q Consensus 163 ---~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~ 202 (354)
+.++.+|+|+||||..|+.++.+ |+ .+..++.+++.
T Consensus 283 ~~~d~~~~~IaG~S~GGl~AL~~al~~Pd----~Fg~v~s~Sgs 322 (411)
T PRK10439 283 FSDDADRTVVAGQSFGGLAALYAGLHWPE----RFGCVLSQSGS 322 (411)
T ss_pred CCCCccceEEEEEChHHHHHHHHHHhCcc----cccEEEEeccc
Confidence 34678999999999999999998 99 99999998874
No 165
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.93 E-value=5.6e-05 Score=74.57 Aligned_cols=109 Identities=12% Similarity=0.130 Sum_probs=71.4
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhh-CC-cEEEEEcccccCCCCCCCCc-----cCcHHHHHHHHHHHHhh---
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDK-ER-WSLVQFLMTSSYTGYGTSSL-----QQDAMEIDQLISYLINK--- 161 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~-~g-~~Via~D~R~~~~G~G~S~~-----~~~~~dl~~~i~~l~~~--- 161 (354)
...|+||+|||-+-..++...+ ....|++ .+ +.|+.+++|-...||..... .....|...+++|+.+.
T Consensus 93 ~~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~ 170 (493)
T cd00312 93 NSLPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAA 170 (493)
T ss_pred CCCCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHH
Confidence 4569999999944211222221 1223332 23 99999999933345554321 23467899999998873
Q ss_pred --CCCCcEEEEEEChhHHHHHHHHHhcccccccccEEEEecccC
Q 018555 162 --DNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVS 203 (354)
Q Consensus 162 --~~~~~~~LvGhS~GG~~a~~~a~~p~~~~~~v~~lIl~~p~~ 203 (354)
.+..+|+|+|||.||..+..++..|. ....++++|++++..
T Consensus 171 fggd~~~v~~~G~SaG~~~~~~~~~~~~-~~~lf~~~i~~sg~~ 213 (493)
T cd00312 171 FGGDPDSVTIFGESAGGASVSLLLLSPD-SKGLFHRAISQSGSA 213 (493)
T ss_pred hCCCcceEEEEeecHHHHHhhhHhhCcc-hhHHHHHHhhhcCCc
Confidence 34679999999999999988887632 123688888887544
No 166
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.92 E-value=0.0001 Score=73.39 Aligned_cols=105 Identities=17% Similarity=0.217 Sum_probs=61.8
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHh----------------hCCcEEEEEcccccCCC-CCCCCccCcHHHHHHH
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALD----------------KERWSLVQFLMTSSYTG-YGTSSLQQDAMEIDQL 154 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La----------------~~g~~Via~D~R~~~~G-~G~S~~~~~~~dl~~~ 154 (354)
-.+-+|+||+|.. ++...-+.+|.... ...|+.++.|+-....- ||++ ..+..+=+.++
T Consensus 87 lsGIPVLFIPGNA---GSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe~tAm~G~~-l~dQtEYV~dA 162 (973)
T KOG3724|consen 87 LSGIPVLFIPGNA---GSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEEFTAMHGHI-LLDQTEYVNDA 162 (973)
T ss_pred CCCceEEEecCCC---CchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccchhhhhccHh-HHHHHHHHHHH
Confidence 3567999999987 56555565655444 13567777777311111 2322 23334445555
Q ss_pred HHHHHhh------CC---CCcEEEEEEChhHHHHHHHHHhcccccccccEEEEec
Q 018555 155 ISYLINK------DN---SEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQA 200 (354)
Q Consensus 155 i~~l~~~------~~---~~~~~LvGhS~GG~~a~~~a~~p~~~~~~v~~lIl~~ 200 (354)
|.++... +. ...++||||||||.+|...+-.++.....|.-+|.++
T Consensus 163 Ik~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITls 217 (973)
T KOG3724|consen 163 IKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLS 217 (973)
T ss_pred HHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhc
Confidence 5555442 22 3459999999999999877755543333566666554
No 167
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=97.88 E-value=0.00027 Score=64.05 Aligned_cols=65 Identities=20% Similarity=0.260 Sum_probs=46.9
Q ss_pred HhcCCC-CCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcC--CCeEEEecCCCccc-Cc-cHH--HHHHHHHHHHHhh
Q 018555 274 RLGHMA-NTPCQVIFSMADEYVPEYVDKKALVERLCRAMG--GAEKVEIEHGIHSL-SN-RVK--EAVQAIIDFVKRE 344 (354)
Q Consensus 274 ~l~~i~-~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~--~~~~~~i~~agH~~-~~-~p~--~~~~~i~~Fl~~~ 344 (354)
.+.++. . |+|+++|.+|.+||.. ..+.+.+... +....++++++|.. .. .+. +..+.+.+|+.+.
T Consensus 226 ~~~~i~~~-P~l~~~G~~D~~vp~~-----~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 226 DAEKISPR-PVLLVHGERDEVVPLR-----DAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred hHhhcCCc-ceEEEecCCCcccchh-----hhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 334444 6 9999999999999987 4444444433 36778899999999 43 332 6788888898764
No 168
>KOG3101 consensus Esterase D [General function prediction only]
Probab=97.88 E-value=0.0001 Score=62.37 Aligned_cols=188 Identities=14% Similarity=0.113 Sum_probs=101.5
Q ss_pred CCCcEEEEECCCCCCCCccccHH---HHHHHHhhCCcEEEEEcccccCCCC-----------CC-------CCccCc---
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLE---PLAIALDKERWSLVQFLMTSSYTGY-----------GT-------SSLQQD--- 147 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~---~la~~La~~g~~Via~D~R~~~~G~-----------G~-------S~~~~~--- 147 (354)
..-|+|.++-|++ ++...+- ..-+.-.++|+.|++||-.. +|. |. .+.+..
T Consensus 42 k~~P~lf~LSGLT---CT~~Nfi~Ksg~qq~As~hgl~vV~PDTSP--RG~~v~g~~eswDFG~GAGFYvnAt~epw~~~ 116 (283)
T KOG3101|consen 42 KRCPVLFYLSGLT---CTHENFIEKSGFQQQASKHGLAVVAPDTSP--RGVEVAGDDESWDFGQGAGFYVNATQEPWAKH 116 (283)
T ss_pred CcCceEEEecCCc---ccchhhHhhhhHHHhHhhcCeEEECCCCCC--CccccCCCcccccccCCceeEEecccchHhhh
Confidence 3458999999999 5554431 12223345899999999731 221 11 011111
Q ss_pred --HHH--HHHHHHHHHh---hCCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhhcchhHHHHHH
Q 018555 148 --AME--IDQLISYLIN---KDNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRATLPETAAMID 219 (354)
Q Consensus 148 --~~d--l~~~i~~l~~---~~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~ 219 (354)
++| ..++.+.+.. .++..++.+.||||||.=|+..+.+ +. +-+.+-..+|+..+..-.+-
T Consensus 117 yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~----kykSvSAFAPI~NP~~cpWG-------- 184 (283)
T KOG3101|consen 117 YRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPS----KYKSVSAFAPICNPINCPWG-------- 184 (283)
T ss_pred hhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcc----cccceeccccccCcccCcch--------
Confidence 111 2233333321 3556789999999999999888877 66 77777766776665321111
Q ss_pred HHHHHHhcCCCCCCCCCCCCCCCcchHHHHhhhhcccCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhc
Q 018555 220 LASSMIREGRGSELMPREADPCSPITAQRYHSLCAYMGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVD 299 (354)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~ 299 (354)
.+.+. .++. ..+..+..| ....+...+..... -+||=+|+.|++.+.+.-
T Consensus 185 --qKAf~-----gYLG-----~~ka~W~~y-----------------Dat~lik~y~~~~~-~ilIdqG~~D~Fl~~qLl 234 (283)
T KOG3101|consen 185 --QKAFT-----GYLG-----DNKAQWEAY-----------------DATHLIKNYRGVGD-DILIDQGAADNFLAEQLL 234 (283)
T ss_pred --HHHhh-----cccC-----CChHHHhhc-----------------chHHHHHhcCCCCc-cEEEecCccchhhhhhcC
Confidence 00000 0010 111111111 11223355667777 899999999998874433
Q ss_pred HHHHHHHHHHHc-CCCeEEEecCCCccc
Q 018555 300 KKALVERLCRAM-GGAEKVEIEHGIHSL 326 (354)
Q Consensus 300 ~~~~~~~~~~~~-~~~~~~~i~~agH~~ 326 (354)
.+.+.+...... ....+...+|-+|..
T Consensus 235 Pe~l~~a~~~~~~~~v~~r~~~gyDHSY 262 (283)
T KOG3101|consen 235 PENLLEACKATWQAPVVFRLQEGYDHSY 262 (283)
T ss_pred hHHHHHHhhccccccEEEEeecCCCcce
Confidence 333333333221 124456688999987
No 169
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.86 E-value=4.8e-05 Score=58.24 Aligned_cols=61 Identities=16% Similarity=0.160 Sum_probs=54.3
Q ss_pred CCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCCeEEEecCCCcccC-ccHHHHHHHHHHHHHhhC
Q 018555 279 ANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGGAEKVEIEHGIHSLS-NRVKEAVQAIIDFVKREG 345 (354)
Q Consensus 279 ~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~-~~p~~~~~~i~~Fl~~~~ 345 (354)
.. |+|+|.++.|+++|.. ..+.+.+.+++++++.+++.||... ..-.-+.+.|.+||..-.
T Consensus 34 ~~-piL~l~~~~Dp~TP~~-----~a~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~G~ 95 (103)
T PF08386_consen 34 AP-PILVLGGTHDPVTPYE-----GARAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLDGT 95 (103)
T ss_pred CC-CEEEEecCcCCCCcHH-----HHHHHHHHCCCceEEEEeccCcceecCCChHHHHHHHHHHHcCC
Confidence 46 9999999999999998 8899999999999999999999995 556788999999998643
No 170
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=97.84 E-value=0.0021 Score=61.74 Aligned_cols=81 Identities=9% Similarity=0.063 Sum_probs=54.8
Q ss_pred ccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHH----HHHHHHHhhCC-CCcEEEEEEChhHHHHHHHH
Q 018555 109 ATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEID----QLISYLINKDN-SEGVVLLGHSTGCQDIVHYM 183 (354)
Q Consensus 109 ~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~----~~i~~l~~~~~-~~~~~LvGhS~GG~~a~~~a 183 (354)
....-..+...|.. |+.|+.+.+.. .....+...|+. ++++.+.+.++ ..+++|+|.+.||+.++.+|
T Consensus 86 GFK~dSevG~AL~~-GHPvYFV~F~p------~P~pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlA 158 (581)
T PF11339_consen 86 GFKPDSEVGVALRA-GHPVYFVGFFP------EPEPGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLA 158 (581)
T ss_pred CCCcccHHHHHHHc-CCCeEEEEecC------CCCCCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHH
Confidence 33345667888885 99999887731 111122344544 34444444443 34899999999999999999
Q ss_pred Hh-cccccccccEEEEec
Q 018555 184 RA-NAACSRAVRAAIFQA 200 (354)
Q Consensus 184 ~~-p~~~~~~v~~lIl~~ 200 (354)
+. |+ .+.-+|+.+
T Consensus 159 A~~Pd----~~gplvlaG 172 (581)
T PF11339_consen 159 ALRPD----LVGPLVLAG 172 (581)
T ss_pred hcCcC----ccCceeecC
Confidence 98 88 888888754
No 171
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.84 E-value=0.003 Score=59.36 Aligned_cols=63 Identities=17% Similarity=0.056 Sum_probs=48.5
Q ss_pred cEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCCeEEEe-----------cCCCccc-CccHHHHHHHHHHHHHhhC
Q 018555 282 PCQVIFSMADEYVPEYVDKKALVERLCRAMGGAEKVEI-----------EHGIHSL-SNRVKEAVQAIIDFVKREG 345 (354)
Q Consensus 282 PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~i-----------~~agH~~-~~~p~~~~~~i~~Fl~~~~ 345 (354)
-.+..|+..|..+|.+ +...+.+.+.+..-++++.+| .+-.|.+ +..-..|.+.+-..|+++.
T Consensus 295 ~yvsYHs~~D~~~p~~-~K~~l~~~l~~lgfda~l~lIkdes~iDGkfIKnl~HGmgis~k~Lf~KeLp~~lek~~ 369 (403)
T PF11144_consen 295 IYVSYHSIKDDLAPAE-DKEELYEILKNLGFDATLHLIKDESEIDGKFIKNLEHGMGISDKALFKKELPLMLEKLQ 369 (403)
T ss_pred EEEEEeccCCCCCCHH-HHHHHHHHHHHcCCCeEEEEecChhhccchheeccccCCCCCHHHHHHHHhHHHHHHhh
Confidence 4457899999999866 677788888887777887765 5678888 7777778888777777754
No 172
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=97.80 E-value=0.00061 Score=66.63 Aligned_cols=103 Identities=16% Similarity=0.091 Sum_probs=72.7
Q ss_pred CCCcEEEEECCCCCCCCccc---cH--HHHHH---HHhhCCcEEEEEcccccCCCCCCCC------ccCcHHHHHHHHHH
Q 018555 92 DYQQQVIFIGGLTDGFFATE---YL--EPLAI---ALDKERWSLVQFLMTSSYTGYGTSS------LQQDAMEIDQLISY 157 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~---~~--~~la~---~La~~g~~Via~D~R~~~~G~G~S~------~~~~~~dl~~~i~~ 157 (354)
++.|+|+..+-++ .... ++ ..... .++.+||.|+..|.| |.|.|. ..+.++|-.++|+|
T Consensus 43 g~~Pvll~~~~~P---y~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvR----G~~~SeG~~~~~~~~E~~Dg~D~I~W 115 (563)
T COG2936 43 GPLPVLLSRTRLP---YRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVR----GRGGSEGVFDPESSREAEDGYDTIEW 115 (563)
T ss_pred CCCceeEEeeccc---cccccccCcchhhcccccceeecCceEEEEeccc----ccccCCcccceeccccccchhHHHHH
Confidence 5678888888222 1111 11 22233 466689999999996 555553 12467888889999
Q ss_pred HHhh-CCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCch
Q 018555 158 LINK-DNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDR 205 (354)
Q Consensus 158 l~~~-~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~ 205 (354)
|.++ ..-.+|..+|-|++|...+.+|+. |. .+++++-..+..+.
T Consensus 116 ia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pP----aLkai~p~~~~~D~ 161 (563)
T COG2936 116 LAKQPWSNGNVGMLGLSYLGFTQLAAAALQPP----ALKAIAPTEGLVDR 161 (563)
T ss_pred HHhCCccCCeeeeecccHHHHHHHHHHhcCCc----hheeeccccccccc
Confidence 9873 334689999999999999999988 76 88888877665553
No 173
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.79 E-value=3.9e-05 Score=68.47 Aligned_cols=50 Identities=20% Similarity=0.226 Sum_probs=40.3
Q ss_pred HHHHHHHHhhCCCC--cEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCch
Q 018555 152 DQLISYLINKDNSE--GVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDR 205 (354)
Q Consensus 152 ~~~i~~l~~~~~~~--~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~ 205 (354)
.+++.++.+.+... +..|+|+||||..|+.++.+ |+ .+.+++.++|....
T Consensus 100 ~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd----~F~~~~~~S~~~~~ 152 (251)
T PF00756_consen 100 EELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPD----LFGAVIAFSGALDP 152 (251)
T ss_dssp THHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTT----TESEEEEESEESET
T ss_pred ccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCcc----ccccccccCccccc
Confidence 35666666655532 27999999999999999999 99 99999999987554
No 174
>COG3150 Predicted esterase [General function prediction only]
Probab=97.74 E-value=0.0019 Score=52.79 Aligned_cols=92 Identities=13% Similarity=0.161 Sum_probs=52.6
Q ss_pred EEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhhCCCCcEEEEEEChhH
Q 018555 97 VIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLGHSTGC 176 (354)
Q Consensus 97 vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~~~~~~~~LvGhS~GG 176 (354)
||++|||-.+..+... ..+.+++.+ ..+-+.+-- .-.+.+..+..+-++.+..+++.+.+.|+|-|+||
T Consensus 2 ilYlHGFnSSP~shka-~l~~q~~~~-~~~~i~y~~---------p~l~h~p~~a~~ele~~i~~~~~~~p~ivGssLGG 70 (191)
T COG3150 2 ILYLHGFNSSPGSHKA-VLLLQFIDE-DVRDIEYST---------PHLPHDPQQALKELEKAVQELGDESPLIVGSSLGG 70 (191)
T ss_pred eEEEecCCCCcccHHH-HHHHHHHhc-cccceeeec---------CCCCCCHHHHHHHHHHHHHHcCCCCceEEeecchH
Confidence 8999999954333222 223444543 222222211 11334445555555555555566779999999999
Q ss_pred HHHHHHHHhcccccccccEEEEecccCch
Q 018555 177 QDIVHYMRANAACSRAVRAAIFQAPVSDR 205 (354)
Q Consensus 177 ~~a~~~a~~p~~~~~~v~~lIl~~p~~~~ 205 (354)
+-|..++.+. -+++ |+++|...+
T Consensus 71 Y~At~l~~~~-----Gira-v~~NPav~P 93 (191)
T COG3150 71 YYATWLGFLC-----GIRA-VVFNPAVRP 93 (191)
T ss_pred HHHHHHHHHh-----CChh-hhcCCCcCc
Confidence 9999888762 2344 345555444
No 175
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=97.73 E-value=0.0014 Score=63.02 Aligned_cols=108 Identities=11% Similarity=0.092 Sum_probs=61.1
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHH-------------------HHhhCCcEEEEEcccccCCCCCCCCc--cC----
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAI-------------------ALDKERWSLVQFLMTSSYTGYGTSSL--QQ---- 146 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~-------------------~La~~g~~Via~D~R~~~~G~G~S~~--~~---- 146 (354)
...|+||++.|-+ +++..+-.+.+ .+. +-.+|+-+|+. -|-|-|.. +.
T Consensus 38 ~~~Pl~~wlnGGP---G~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~-~~an~l~iD~P---vGtGfS~~~~~~~~~~ 110 (415)
T PF00450_consen 38 EDDPLILWLNGGP---GCSSMWGLFGENGPFRINPDGPYTLEDNPYSWN-KFANLLFIDQP---VGTGFSYGNDPSDYVW 110 (415)
T ss_dssp CSS-EEEEEE-TT---TB-THHHHHCTTSSEEEETTSTSEEEE-TT-GG-GTSEEEEE--S---TTSTT-EESSGGGGS-
T ss_pred CCccEEEEecCCc---eeccccccccccCceEEeecccccccccccccc-cccceEEEeec---CceEEeeccccccccc
Confidence 5679999999977 45554422211 011 13466777764 56776632 11
Q ss_pred -c---HHHHHHHHHHHHh---hCCCCcEEEEEEChhHHHHHHHHHh-cccc------cccccEEEEecccCchH
Q 018555 147 -D---AMEIDQLISYLIN---KDNSEGVVLLGHSTGCQDIVHYMRA-NAAC------SRAVRAAIFQAPVSDRE 206 (354)
Q Consensus 147 -~---~~dl~~~i~~l~~---~~~~~~~~LvGhS~GG~~a~~~a~~-p~~~------~~~v~~lIl~~p~~~~~ 206 (354)
. ++++.+++..+.. ++...+++|.|.|+||.-+..+|.+ -+.. ...++|+++.+|..++.
T Consensus 111 ~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~dp~ 184 (415)
T PF00450_consen 111 NDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWIDPR 184 (415)
T ss_dssp SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SBHH
T ss_pred hhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCcccccc
Confidence 1 3344444433333 4455699999999999988777765 2121 45789999999987764
No 176
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=97.57 E-value=0.00016 Score=68.89 Aligned_cols=110 Identities=17% Similarity=0.193 Sum_probs=71.0
Q ss_pred CCCcEEEEECCCC--CCCCccccHHHHHHHHhhCC-cEEEEEcccccCCCCCC-CCcc--------CcHHHHHHHHHHHH
Q 018555 92 DYQQQVIFIGGLT--DGFFATEYLEPLAIALDKER-WSLVQFLMTSSYTGYGT-SSLQ--------QDAMEIDQLISYLI 159 (354)
Q Consensus 92 ~~~p~vIliHG~~--~~~~~~~~~~~la~~La~~g-~~Via~D~R~~~~G~G~-S~~~--------~~~~dl~~~i~~l~ 159 (354)
++.|++|+|||-+ -|.++...++ ...|+++| +-|+.+++|=...||=. +... -...|...+++|+.
T Consensus 92 ~~~PVmV~IHGG~y~~Gs~s~~~yd--gs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~ 169 (491)
T COG2272 92 EKLPVMVYIHGGGYIMGSGSEPLYD--GSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVR 169 (491)
T ss_pred CCCcEEEEEeccccccCCCcccccC--hHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHH
Confidence 4569999999933 1222222233 24576667 99999999922222211 1111 23678888888887
Q ss_pred hh---C--CCCcEEEEEEChhHHHHHHHHHhcccccccccEEEEecccCc
Q 018555 160 NK---D--NSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSD 204 (354)
Q Consensus 160 ~~---~--~~~~~~LvGhS~GG~~a~~~a~~p~~~~~~v~~lIl~~p~~~ 204 (354)
+. . +.+.|.|+|+|-|++.++.+++-|..+ -.+.++|++++...
T Consensus 170 ~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~Ak-GLF~rAi~~Sg~~~ 218 (491)
T COG2272 170 DNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAK-GLFHRAIALSGAAS 218 (491)
T ss_pred HHHHHhCCCccceEEeeccchHHHHHHhhcCccch-HHHHHHHHhCCCCC
Confidence 72 2 467899999999999998888765321 15777777776553
No 177
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=97.55 E-value=0.0014 Score=64.65 Aligned_cols=208 Identities=13% Similarity=0.077 Sum_probs=113.1
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccc-cCCCC-----CCC-CccCcHHHHHHHHHHHHhh-C-
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTS-SYTGY-----GTS-SLQQDAMEIDQLISYLINK-D- 162 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~-~~~G~-----G~S-~~~~~~~dl~~~i~~l~~~-~- 162 (354)
++.|+||..=|-- |......|....=-|.++||---....|| ...|+ |+- .+.....|..++.++|.++ +
T Consensus 446 g~~p~lLygYGaY-G~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~ 524 (682)
T COG1770 446 GSAPLLLYGYGAY-GISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYT 524 (682)
T ss_pred CCCcEEEEEeccc-cccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcC
Confidence 4567777665522 11122224433333555788666666652 11111 111 2345678999999999873 2
Q ss_pred CCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhhcchhHHHHHHHHHHHHhcCCCCCCCCCCCCC-
Q 018555 163 NSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLASSMIREGRGSELMPREADP- 240 (354)
Q Consensus 163 ~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 240 (354)
..+.++++|-|.||++.-..+.. |+ ..+++|+.-|+.+...-.. .... .+-..++..
T Consensus 525 ~~~~i~a~GGSAGGmLmGav~N~~P~----lf~~iiA~VPFVDvltTMl---------------D~sl--PLT~~E~~EW 583 (682)
T COG1770 525 SPDRIVAIGGSAGGMLMGAVANMAPD----LFAGIIAQVPFVDVLTTML---------------DPSL--PLTVTEWDEW 583 (682)
T ss_pred CccceEEeccCchhHHHHHHHhhChh----hhhheeecCCccchhhhhc---------------CCCC--CCCccchhhh
Confidence 34689999999999999999888 99 9999999988776532110 0000 000000000
Q ss_pred CCcch--HHHHhhhhcccCCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCCe---
Q 018555 241 CSPIT--AQRYHSLCAYMGDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGGAE--- 315 (354)
Q Consensus 241 ~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~~--- 315 (354)
..|.. .++++.-..+. +++..-.-.|+|++.|.+|+-|... ...+++.+++..-.+..
T Consensus 584 GNP~d~e~y~yikSYSPY----------------dNV~a~~YP~ilv~~Gl~D~rV~Yw-EpAKWvAkLR~~~td~~plL 646 (682)
T COG1770 584 GNPLDPEYYDYIKSYSPY----------------DNVEAQPYPAILVTTGLNDPRVQYW-EPAKWVAKLRELKTDGNPLL 646 (682)
T ss_pred CCcCCHHHHHHHhhcCch----------------hccccCCCCceEEEccccCCccccc-hHHHHHHHHhhcccCCCcEE
Confidence 11111 11111111110 1111111138999999999988754 44456767766544432
Q ss_pred EEEecCCCccc-CccHHHHHHHHH
Q 018555 316 KVEIEHGIHSL-SNRVKEAVQAII 338 (354)
Q Consensus 316 ~~~i~~agH~~-~~~p~~~~~~i~ 338 (354)
+.+=-++||.- ..+.+.+.+...
T Consensus 647 lkt~M~aGHgG~SgRf~~lee~A~ 670 (682)
T COG1770 647 LKTNMDAGHGGASGRFQRLEEIAF 670 (682)
T ss_pred EEecccccCCCCCCchHHHHHHHH
Confidence 23335799987 555554444333
No 178
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.50 E-value=0.00075 Score=67.04 Aligned_cols=109 Identities=13% Similarity=0.110 Sum_probs=66.3
Q ss_pred CCcEEEEECCCCCCCCcc--ccHHHHHHHHhhCCcEEEEEcccccCCCCC---CCC---ccCcHHHHHHHHHHHHhh---
Q 018555 93 YQQQVIFIGGLTDGFFAT--EYLEPLAIALDKERWSLVQFLMTSSYTGYG---TSS---LQQDAMEIDQLISYLINK--- 161 (354)
Q Consensus 93 ~~p~vIliHG~~~~~~~~--~~~~~la~~La~~g~~Via~D~R~~~~G~G---~S~---~~~~~~dl~~~i~~l~~~--- 161 (354)
.-|++|+|||-+-..++. ..+. -...+++++.-||.+++|-.-.||- ... ......|...+++|+.+.
T Consensus 124 ~lPV~v~ihGG~f~~G~~~~~~~~-~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~ 202 (535)
T PF00135_consen 124 KLPVMVWIHGGGFMFGSGSFPPYD-GASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAA 202 (535)
T ss_dssp SEEEEEEE--STTTSSCTTSGGGH-THHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGG
T ss_pred ccceEEEeecccccCCCccccccc-ccccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhh
Confidence 359999999944222222 2233 3344556799999999992212222 222 223467999999999883
Q ss_pred C--CCCcEEEEEEChhHHHHHHHHHhcccccccccEEEEecccC
Q 018555 162 D--NSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVS 203 (354)
Q Consensus 162 ~--~~~~~~LvGhS~GG~~a~~~a~~p~~~~~~v~~lIl~~p~~ 203 (354)
. +.++|+|+|||-||..+...+..| .....+.++|+.++..
T Consensus 203 FGGDp~~VTl~G~SAGa~sv~~~l~sp-~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 203 FGGDPDNVTLFGQSAGAASVSLLLLSP-SSKGLFHRAILQSGSA 245 (535)
T ss_dssp GTEEEEEEEEEEETHHHHHHHHHHHGG-GGTTSBSEEEEES--T
T ss_pred cccCCcceeeeeecccccccceeeecc-cccccccccccccccc
Confidence 2 357899999999999888777663 2233899999998743
No 179
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.49 E-value=0.00022 Score=69.68 Aligned_cols=88 Identities=16% Similarity=0.297 Sum_probs=60.5
Q ss_pred cHHHHHHHHhhCCcE-----EEEEcccccCCCCCCC-CccCcHHHHHHHHHHHHhhCCCCcEEEEEEChhHHHHHHHHHh
Q 018555 112 YLEPLAIALDKERWS-----LVQFLMTSSYTGYGTS-SLQQDAMEIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRA 185 (354)
Q Consensus 112 ~~~~la~~La~~g~~-----Via~D~R~~~~G~G~S-~~~~~~~dl~~~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~ 185 (354)
.|..+++.|++.||. ...||.| .+.-.. ........+..+|+.+.+.-+-++++||||||||.+++.+...
T Consensus 157 vw~kLIe~L~~iGY~~~nL~gAPYDWR---ls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~w 233 (642)
T PLN02517 157 VWAVLIANLARIGYEEKNMYMAAYDWR---LSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKW 233 (642)
T ss_pred eHHHHHHHHHHcCCCCCceeecccccc---cCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHh
Confidence 579999999999985 2334444 221111 1233456788888887665556899999999999999998763
Q ss_pred -c--c---------cccccccEEEEeccc
Q 018555 186 -N--A---------ACSRAVRAAIFQAPV 202 (354)
Q Consensus 186 -p--~---------~~~~~v~~lIl~~p~ 202 (354)
. . =+...|+.+|.+++.
T Consensus 234 v~~~~~~gG~gG~~W~dKyI~s~I~Iagp 262 (642)
T PLN02517 234 VEAPAPMGGGGGPGWCAKHIKAVMNIGGP 262 (642)
T ss_pred ccccccccCCcchHHHHHHHHHheecccc
Confidence 1 0 034578999988763
No 180
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.48 E-value=0.00078 Score=63.10 Aligned_cols=65 Identities=18% Similarity=0.178 Sum_probs=50.6
Q ss_pred HHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCC-CeEEEecCCCcccCccHHHHHHHHHHHHHhhC
Q 018555 273 QRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGG-AEKVEIEHGIHSLSNRVKEAVQAIIDFVKREG 345 (354)
Q Consensus 273 ~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~-~~~~~i~~agH~~~~~p~~~~~~i~~Fl~~~~ 345 (354)
....++.+ |.++|.|..|++..++ ....+-..+|+ ..+.++||++|.... ..+.+.+..|+..+.
T Consensus 256 ~Y~~rL~~-PK~ii~atgDeFf~pD-----~~~~y~d~L~G~K~lr~vPN~~H~~~~--~~~~~~l~~f~~~~~ 321 (367)
T PF10142_consen 256 SYRDRLTM-PKYIINATGDEFFVPD-----SSNFYYDKLPGEKYLRYVPNAGHSLIG--SDVVQSLRAFYNRIQ 321 (367)
T ss_pred HHHHhcCc-cEEEEecCCCceeccC-----chHHHHhhCCCCeeEEeCCCCCcccch--HHHHHHHHHHHHHHH
Confidence 34467788 9999999999988776 45555666666 557889999999955 677788889988753
No 181
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=97.46 E-value=0.0015 Score=64.01 Aligned_cols=109 Identities=16% Similarity=0.193 Sum_probs=75.3
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCC--------CccCcHHHHHHHHHHHHhh--
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTS--------SLQQDAMEIDQLISYLINK-- 161 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S--------~~~~~~~dl~~~i~~l~~~-- 161 (354)
+++|.+|..+|.- |..-...|..--.-|-+.|+-....|.||. .++|.. -+....+|..+.+++|.+.
T Consensus 468 g~~P~LLygYGay-~isl~p~f~~srl~lld~G~Vla~a~VRGG-Ge~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gy 545 (712)
T KOG2237|consen 468 GSKPLLLYGYGAY-GISLDPSFRASRLSLLDRGWVLAYANVRGG-GEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGY 545 (712)
T ss_pred CCCceEEEEeccc-ceeeccccccceeEEEecceEEEEEeeccC-cccccchhhccchhhhcccHHHHHHHHHHHHHcCC
Confidence 4678887777722 112233355333334457988888899742 122321 1345688999999999873
Q ss_pred CCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchH
Q 018555 162 DNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDRE 206 (354)
Q Consensus 162 ~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~ 206 (354)
....+..+.|.|-||.++...+.. |+ .+.++|+--|+.+..
T Consensus 546 t~~~kL~i~G~SaGGlLvga~iN~rPd----LF~avia~VpfmDvL 587 (712)
T KOG2237|consen 546 TQPSKLAIEGGSAGGLLVGACINQRPD----LFGAVIAKVPFMDVL 587 (712)
T ss_pred CCccceeEecccCccchhHHHhccCch----HhhhhhhcCcceehh
Confidence 235689999999999999888887 88 999999988877653
No 182
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.40 E-value=0.0009 Score=58.64 Aligned_cols=102 Identities=15% Similarity=0.179 Sum_probs=63.5
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCc-HHHHHHHHHHHHhhCC----CCc
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQD-AMEIDQLISYLINKDN----SEG 166 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~-~~dl~~~i~~l~~~~~----~~~ 166 (354)
.+.-+|=|++|.-=|..-.-.++.+.+.|+++||.|++.-+. .|+..-..... .......++.|.+..+ .-+
T Consensus 15 ~P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~---~tfDH~~~A~~~~~~f~~~~~~L~~~~~~~~~~lP 91 (250)
T PF07082_consen 15 RPKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYV---VTFDHQAIAREVWERFERCLRALQKRGGLDPAYLP 91 (250)
T ss_pred CCCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecC---CCCcHHHHHHHHHHHHHHHHHHHHHhcCCCcccCC
Confidence 344567788883322222333889999999999999999885 44333221111 2234445555554322 136
Q ss_pred EEEEEEChhHHHHHHHHHh-cccccccccEEEEec
Q 018555 167 VVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQA 200 (354)
Q Consensus 167 ~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~ 200 (354)
++-|||||||.+-+.+... .. .-++-|+++
T Consensus 92 ~~~vGHSlGcklhlLi~s~~~~----~r~gniliS 122 (250)
T PF07082_consen 92 VYGVGHSLGCKLHLLIGSLFDV----ERAGNILIS 122 (250)
T ss_pred eeeeecccchHHHHHHhhhccC----cccceEEEe
Confidence 7889999999998887766 33 335667665
No 183
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.34 E-value=0.0014 Score=58.86 Aligned_cols=101 Identities=16% Similarity=0.192 Sum_probs=52.1
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhh--CCcEEEEEcccccCCCCCCC-Cc-----cCcHHHHHHHHHHHHh--h
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDK--ERWSLVQFLMTSSYTGYGTS-SL-----QQDAMEIDQLISYLIN--K 161 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~--~g~~Via~D~R~~~~G~G~S-~~-----~~~~~dl~~~i~~l~~--~ 161 (354)
....+||+.||+|+..++..-+..+.+.+.+ -|-.|..+++ |-+.. +. ...-+.++.+-+.+.. +
T Consensus 3 ~~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~i-----g~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~ 77 (279)
T PF02089_consen 3 PSPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEI-----GNDPSEDVENSFFGNVNDQVEQVCEQLANDPE 77 (279)
T ss_dssp TSS--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--S-----SSSHHHHHHHHHHSHHHHHHHHHHHHHHH-GG
T ss_pred CCCCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEE-----CCCcchhhhhhHHHHHHHHHHHHHHHHhhChh
Confidence 3456899999999875444344444443333 3788888887 33321 11 1112233333343333 2
Q ss_pred CCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecc
Q 018555 162 DNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAP 201 (354)
Q Consensus 162 ~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p 201 (354)
+ ..-+.+||+|.||.++-.++.+ +. ..|+-+|-++.
T Consensus 78 L-~~G~~~IGfSQGgl~lRa~vq~c~~---~~V~nlISlgg 114 (279)
T PF02089_consen 78 L-ANGFNAIGFSQGGLFLRAYVQRCND---PPVHNLISLGG 114 (279)
T ss_dssp G-TT-EEEEEETCHHHHHHHHHHH-TS---S-EEEEEEES-
T ss_pred h-hcceeeeeeccccHHHHHHHHHCCC---CCceeEEEecC
Confidence 2 2569999999999999999988 43 37999998764
No 184
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=97.21 E-value=0.0024 Score=55.18 Aligned_cols=79 Identities=18% Similarity=0.265 Sum_probs=49.3
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcE-EEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhhCCCCcEEEE
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWS-LVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLL 170 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~-Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~~~~~~~~Lv 170 (354)
..+..|||..||| ++...+.+|. +. .+|. ++.+|+|. .+-+ . + +. +.+++.||
T Consensus 9 ~~~~LilfF~GWg---~d~~~f~hL~--~~-~~~D~l~~yDYr~---------l~~d---~----~-~~---~y~~i~lv 62 (213)
T PF04301_consen 9 NGKELILFFAGWG---MDPSPFSHLI--LP-ENYDVLICYDYRD---------LDFD---F----D-LS---GYREIYLV 62 (213)
T ss_pred CCCeEEEEEecCC---CChHHhhhcc--CC-CCccEEEEecCcc---------cccc---c----c-cc---cCceEEEE
Confidence 4468999999999 7665555442 22 2444 45678862 1111 1 1 21 36899999
Q ss_pred EEChhHHHHHHHHHhcccccccccEEEEecc
Q 018555 171 GHSTGCQDIVHYMRANAACSRAVRAAIFQAP 201 (354)
Q Consensus 171 GhS~GG~~a~~~a~~p~~~~~~v~~lIl~~p 201 (354)
++|||-.+|..+.... .++..|.++.
T Consensus 63 AWSmGVw~A~~~l~~~-----~~~~aiAING 88 (213)
T PF04301_consen 63 AWSMGVWAANRVLQGI-----PFKRAIAING 88 (213)
T ss_pred EEeHHHHHHHHHhccC-----CcceeEEEEC
Confidence 9999999998776442 3455555543
No 185
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=97.18 E-value=0.0006 Score=64.63 Aligned_cols=87 Identities=17% Similarity=0.247 Sum_probs=61.9
Q ss_pred ccHHHHHHHHhhCCcE------EEEEcccccCCCCCCCC-ccCcHHHHHHHHHHHHhhCCCCcEEEEEEChhHHHHHHHH
Q 018555 111 EYLEPLAIALDKERWS------LVQFLMTSSYTGYGTSS-LQQDAMEIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYM 183 (354)
Q Consensus 111 ~~~~~la~~La~~g~~------Via~D~R~~~~G~G~S~-~~~~~~dl~~~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a 183 (354)
.+|..+++.|..-||. -..||.| .++-.+. .++....+...++..-+..|-+|++||+|||||.+.++++
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwR---ls~~~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl 200 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWR---LSYHNSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFL 200 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchh---hccCChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHH
Confidence 4799999999987886 4557887 5553332 3334567777777777777779999999999999999999
Q ss_pred Hh-ccc----ccccccEEEEec
Q 018555 184 RA-NAA----CSRAVRAAIFQA 200 (354)
Q Consensus 184 ~~-p~~----~~~~v~~lIl~~ 200 (354)
.. ++. +...|+++|-++
T Consensus 201 ~w~~~~~~~W~~k~I~sfvnig 222 (473)
T KOG2369|consen 201 KWVEAEGPAWCDKYIKSFVNIG 222 (473)
T ss_pred hcccccchhHHHHHHHHHHccC
Confidence 87 431 223455555443
No 186
>PLN02209 serine carboxypeptidase
Probab=97.16 E-value=0.16 Score=49.28 Aligned_cols=63 Identities=13% Similarity=0.123 Sum_probs=44.5
Q ss_pred CCCcEEEEeeCCCCCCCchhcHHHHHHHHH--------------------HHcCC-CeEEEecCCCcccCccHHHHHHHH
Q 018555 279 ANTPCQVIFSMADEYVPEYVDKKALVERLC--------------------RAMGG-AEKVEIEHGIHSLSNRVKEAVQAI 337 (354)
Q Consensus 279 ~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~--------------------~~~~~-~~~~~i~~agH~~~~~p~~~~~~i 337 (354)
.. ++|+..|+.|-+||... .+...+.+. +...+ ..++.|.+|||++..+|++..+.+
T Consensus 351 gi-rVLiY~GD~D~icn~~G-te~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp~qP~~al~m~ 428 (437)
T PLN02209 351 GY-RSLIFSGDHDITMPFQA-TQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAEYLPEESSIMF 428 (437)
T ss_pred Cc-eEEEEECCccccCCcHh-HHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcCcCHHHHHHHH
Confidence 35 99999999999998751 112222221 11122 456778999999966999999999
Q ss_pred HHHHHh
Q 018555 338 IDFVKR 343 (354)
Q Consensus 338 ~~Fl~~ 343 (354)
..|+..
T Consensus 429 ~~fi~~ 434 (437)
T PLN02209 429 QRWISG 434 (437)
T ss_pred HHHHcC
Confidence 999964
No 187
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.02 E-value=0.036 Score=51.54 Aligned_cols=241 Identities=10% Similarity=0.039 Sum_probs=122.7
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhhCC--CCcEEE
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDN--SEGVVL 169 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~~~--~~~~~L 169 (354)
..++.|+++...| ....+.........+.||.|+.+-....--....+...-........+..|...+. ..++++
T Consensus 37 s~k~Iv~~~gWag---~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~~sl~~~~~~l~~L~~~~~~~~~pi~f 113 (350)
T KOG2521|consen 37 SEKPIVVLLGWAG---AIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRILSLSLASTRLSELLSDYNSDPCPIIF 113 (350)
T ss_pred ccccEEEEeeecc---ccchhHHHHHHHHhcCCceEEEecCcccccccccccccchhhHHHHHHHHHhhhccCCcCceEE
Confidence 3346666776655 45556667777777789999999874322344445444444444445555544333 567888
Q ss_pred EEEChhHHHHHHHH-Hh-cc--ccc-ccccEEEEecccCchH-hhhcchhHHHH--HHHHHHHHhcCCCCCCCCCCCCCC
Q 018555 170 LGHSTGCQDIVHYM-RA-NA--ACS-RAVRAAIFQAPVSDRE-YRATLPETAAM--IDLASSMIREGRGSELMPREADPC 241 (354)
Q Consensus 170 vGhS~GG~~a~~~a-~~-p~--~~~-~~v~~lIl~~p~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 241 (354)
--.|+||...+... .. .+ .+. ....++++.+...... .....+..... .+....+......-..+....
T Consensus 114 h~FS~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~--- 190 (350)
T KOG2521|consen 114 HVFSGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARSSPVQLGWAVSFSSPPDDYVARWARLNYHITLLTMAG--- 190 (350)
T ss_pred EEecCCceeehHHHHHHHhhcCchhHhhcCCceEeccccccchhhhcceeccccCchhhHHHHHhcCeEEEEEEeee---
Confidence 89999998877665 22 21 122 2456688766544321 11111000000 011111111110000000000
Q ss_pred CcchHHHHhhhhccc--CCCccccCCCChHHHHHHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCCeEEEe
Q 018555 242 SPITAQRYHSLCAYM--GDDDMFSSDLSDDQLKQRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGGAEKVEI 319 (354)
Q Consensus 242 ~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~i 319 (354)
.....+.+..++... ..... ..+.+...-..... +.+.+.+..|.++|.+ +.+++.+...+..-+.+-+-+
T Consensus 191 ~~~~~~~~~~~~~~~~~~r~~~-----~~~r~~~~~~~~~~-~~ly~~s~~d~v~~~~-~ie~f~~~~~~~g~~v~s~~~ 263 (350)
T KOG2521|consen 191 NEGGAYLLGPLAEKISMSRKYH-----FLDRYEEQRNELPW-NQLYLYSDNDDVLPAD-EIEKFIALRREKGVNVKSVKF 263 (350)
T ss_pred cccchhhhhhhhhccccccchH-----HHHHHHhhhhcccc-cceeecCCccccccHH-HHHHHHHHHHhcCceEEEeec
Confidence 000011111110000 00000 00111112222345 8889999999999987 333344444444445566678
Q ss_pred cCCCccc--CccHHHHHHHHHHHHHhhC
Q 018555 320 EHGIHSL--SNRVKEAVQAIIDFVKREG 345 (354)
Q Consensus 320 ~~agH~~--~~~p~~~~~~i~~Fl~~~~ 345 (354)
.++-|.. ...|..+.+...+|++...
T Consensus 264 ~ds~H~~h~r~~p~~y~~~~~~Fl~~~~ 291 (350)
T KOG2521|consen 264 KDSEHVAHFRSFPKTYLKKCSEFLRSVI 291 (350)
T ss_pred cCccceeeeccCcHHHHHHHHHHHHhcc
Confidence 8999998 4689999999999998764
No 188
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=97.02 E-value=0.071 Score=51.60 Aligned_cols=63 Identities=19% Similarity=0.181 Sum_probs=44.2
Q ss_pred CCCcEEEEeeCCCCCCCchhcHHHHHHHHH--------------------HHcCC-CeEEEecCCCcccCccHHHHHHHH
Q 018555 279 ANTPCQVIFSMADEYVPEYVDKKALVERLC--------------------RAMGG-AEKVEIEHGIHSLSNRVKEAVQAI 337 (354)
Q Consensus 279 ~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~--------------------~~~~~-~~~~~i~~agH~~~~~p~~~~~~i 337 (354)
.. ++||..|+.|-+||.-. .+...+.+. +...+ ..++.|.+|||++..+|++..+.+
T Consensus 347 ~i-rVLiY~Gd~D~icn~~G-t~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp~qP~~al~m~ 424 (433)
T PLN03016 347 GY-RSLIYSGDHDIAVPFLA-TQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAEYRPNETFIMF 424 (433)
T ss_pred Cc-eEEEEECCccccCCcHh-HHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCCCCHHHHHHHH
Confidence 35 99999999999998752 112222211 01112 456778999999966899999999
Q ss_pred HHHHHh
Q 018555 338 IDFVKR 343 (354)
Q Consensus 338 ~~Fl~~ 343 (354)
..|+..
T Consensus 425 ~~Fi~~ 430 (433)
T PLN03016 425 QRWISG 430 (433)
T ss_pred HHHHcC
Confidence 999965
No 189
>COG0627 Predicted esterase [General function prediction only]
Probab=96.91 E-value=0.041 Score=50.80 Aligned_cols=37 Identities=16% Similarity=0.177 Sum_probs=32.7
Q ss_pred cEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchH
Q 018555 166 GVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDRE 206 (354)
Q Consensus 166 ~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~ 206 (354)
+..++||||||.=|+.+|.+ |+ +++.+.-.+|+..+.
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~pd----~f~~~sS~Sg~~~~s 190 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKHPD----RFKSASSFSGILSPS 190 (316)
T ss_pred CceeEEEeccchhhhhhhhhCcc----hhceecccccccccc
Confidence 78999999999999999999 78 999988888776654
No 190
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.91 E-value=0.0033 Score=51.62 Aligned_cols=52 Identities=12% Similarity=-0.032 Sum_probs=33.7
Q ss_pred HHHHHHHHHHhhCCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecc
Q 018555 150 EIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAP 201 (354)
Q Consensus 150 dl~~~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p 201 (354)
.+...++....+++..+++++|||+||.+|..++.. .......+..++..++
T Consensus 13 ~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~ 65 (153)
T cd00741 13 LVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGP 65 (153)
T ss_pred HHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCC
Confidence 344444444444577899999999999999998876 3211123445555554
No 191
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=96.77 E-value=0.15 Score=50.07 Aligned_cols=62 Identities=21% Similarity=0.244 Sum_probs=47.3
Q ss_pred CcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCC--------CeEEEecCCCccc--C-ccHHHHHHHHHHHHHh
Q 018555 281 TPCQVIFSMADEYVPEYVDKKALVERLCRAMGG--------AEKVEIEHGIHSL--S-NRVKEAVQAIIDFVKR 343 (354)
Q Consensus 281 ~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~--------~~~~~i~~agH~~--~-~~p~~~~~~i~~Fl~~ 343 (354)
..+|+.||..|.+||+. ..-.+.+++.+.+++ .++.++||.+|+. . ..+-.+...|.+|+++
T Consensus 354 GKLI~~HG~aD~~I~p~-~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 354 GKLILYHGWADPLIPPQ-GTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVEN 426 (474)
T ss_pred CeEEEEecCCCCccCCC-cHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhC
Confidence 49999999999999886 333455566655543 4688899999999 2 3455788899999986
No 192
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.69 E-value=0.004 Score=50.12 Aligned_cols=55 Identities=24% Similarity=0.215 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEEEChhHHHHHHHHHh-cccc---cccccEEEEecccC
Q 018555 149 MEIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRA-NAAC---SRAVRAAIFQAPVS 203 (354)
Q Consensus 149 ~dl~~~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~-p~~~---~~~v~~lIl~~p~~ 203 (354)
+.+.+.++.+.+++...++++.|||+||.+|..++.. .... ...+..+.+-+|..
T Consensus 48 ~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 48 DQILDALKELVEKYPDYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S--
T ss_pred HHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCccc
Confidence 3455555555556666789999999999999988876 2111 12455555544433
No 193
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=96.61 E-value=0.0094 Score=57.88 Aligned_cols=102 Identities=17% Similarity=0.140 Sum_probs=63.9
Q ss_pred CCCcEEEEECCCCCCCCcccc-HHHHHHHHhh-CCcEEEEEcccccCCCCCCCCc--------------cCcHHHHHHHH
Q 018555 92 DYQQQVIFIGGLTDGFFATEY-LEPLAIALDK-ERWSLVQFLMTSSYTGYGTSSL--------------QQDAMEIDQLI 155 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~-~~~la~~La~-~g~~Via~D~R~~~~G~G~S~~--------------~~~~~dl~~~i 155 (354)
+.+|++|++.|=++ ....+ ...+...|++ .|=.|+++.+ +-||.|.. ++...|++.++
T Consensus 27 ~~gpifl~~ggE~~--~~~~~~~~~~~~~lA~~~~a~~v~lEH----RyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~ 100 (434)
T PF05577_consen 27 PGGPIFLYIGGEGP--IEPFWINNGFMWELAKEFGALVVALEH----RYYGKSQPFGDLSTENLRYLTSEQALADLAYFI 100 (434)
T ss_dssp TTSEEEEEE--SS---HHHHHHH-HHHHHHHHHHTEEEEEE------TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCc--cchhhhcCChHHHHHHHcCCcEEEeeh----hhhcCCCCccccchhhHHhcCHHHHHHHHHHHH
Confidence 33889999988552 21111 1223344443 3568999999 47888741 12367899999
Q ss_pred HHHHhhC---CCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccC
Q 018555 156 SYLINKD---NSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVS 203 (354)
Q Consensus 156 ~~l~~~~---~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~ 203 (354)
++++.++ ...|++++|-|+||.+|..+-.+ |+ .|.+.+.-+++.
T Consensus 101 ~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~----~~~ga~ASSapv 148 (434)
T PF05577_consen 101 RYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPH----LFDGAWASSAPV 148 (434)
T ss_dssp HHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TT----T-SEEEEET--C
T ss_pred HHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCC----eeEEEEecccee
Confidence 9998654 33589999999999999988888 98 999999876543
No 194
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=96.50 E-value=0.026 Score=55.32 Aligned_cols=206 Identities=16% Similarity=0.112 Sum_probs=115.0
Q ss_pred CCcEEEEECCCCCC-CCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCC-----------ccCcHHHHHHHHHHHHh
Q 018555 93 YQQQVIFIGGLTDG-FFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSS-----------LQQDAMEIDQLISYLIN 160 (354)
Q Consensus 93 ~~p~vIliHG~~~~-~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~-----------~~~~~~dl~~~i~~l~~ 160 (354)
+.|++| ||+|+. ..-.+.+.......-++|...+..++| |-|.-. +....+|..++.++|.+
T Consensus 420 ~~pTll--~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIR----GGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~ 493 (648)
T COG1505 420 ENPTLL--YAYGGFNISLTPRFSGSRKLWLERGGVFVLANIR----GGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIK 493 (648)
T ss_pred CCceEE--EeccccccccCCccchhhHHHHhcCCeEEEEecc----cCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHH
Confidence 345555 454431 122334444445555569999999996 444332 34557899999999987
Q ss_pred h--CCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCchHhhhcchhHHHHHHHHHHHHhcCCCCCCCCCC
Q 018555 161 K--DNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDREYRATLPETAAMIDLASSMIREGRGSELMPRE 237 (354)
Q Consensus 161 ~--~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (354)
+ -..+++.+.|-|-||.+.-..+-+ |+ .+.++|+.-|+.+......+. .+..++..+
T Consensus 494 rgitspe~lgi~GgSNGGLLvg~alTQrPe----lfgA~v~evPllDMlRYh~l~----------------aG~sW~~EY 553 (648)
T COG1505 494 RGITSPEKLGIQGGSNGGLLVGAALTQRPE----LFGAAVCEVPLLDMLRYHLLT----------------AGSSWIAEY 553 (648)
T ss_pred hCCCCHHHhhhccCCCCceEEEeeeccChh----hhCceeeccchhhhhhhcccc----------------cchhhHhhc
Confidence 4 124689999999999977655555 88 889988877766543221110 011112222
Q ss_pred CCCCCcchHHHHhhhhcccCCCccccCCCChHHHHHHh--cCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCCe
Q 018555 238 ADPCSPITAQRYHSLCAYMGDDDMFSSDLSDDQLKQRL--GHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGGAE 315 (354)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l--~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~~ 315 (354)
-.++.|.... ++....+. .++ ++.-. |+||--+.+|.-|.|. +.-+++.++++.....-
T Consensus 554 G~Pd~P~d~~-~l~~YSPy----------------~nl~~g~kYP-~~LITTs~~DDRVHPa-HarKfaa~L~e~~~pv~ 614 (648)
T COG1505 554 GNPDDPEDRA-FLLAYSPY----------------HNLKPGQKYP-PTLITTSLHDDRVHPA-HARKFAAKLQEVGAPVL 614 (648)
T ss_pred CCCCCHHHHH-HHHhcCch----------------hcCCccccCC-CeEEEcccccccccch-HHHHHHHHHHhcCCceE
Confidence 2223333322 22111110 111 12234 9999999998877555 22334445555443344
Q ss_pred EEEecCCCccc-CccHHH--HHHHHHHHHHh
Q 018555 316 KVEIEHGIHSL-SNRVKE--AVQAIIDFVKR 343 (354)
Q Consensus 316 ~~~i~~agH~~-~~~p~~--~~~~i~~Fl~~ 343 (354)
+.+=-++||.- .+..+. -...+..||.+
T Consensus 615 ~~e~t~gGH~g~~~~~~~A~~~a~~~afl~r 645 (648)
T COG1505 615 LREETKGGHGGAAPTAEIARELADLLAFLLR 645 (648)
T ss_pred EEeecCCcccCCCChHHHHHHHHHHHHHHHH
Confidence 45556799999 443332 23345567665
No 195
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=96.30 E-value=0.72 Score=44.70 Aligned_cols=64 Identities=14% Similarity=0.141 Sum_probs=45.3
Q ss_pred CCcEEEEeeCCCCCCCchhcHHHHHHHHHH---------------------HcCCCeEEEecCCCccc-CccHHHHHHHH
Q 018555 280 NTPCQVIFSMADEYVPEYVDKKALVERLCR---------------------AMGGAEKVEIEHGIHSL-SNRVKEAVQAI 337 (354)
Q Consensus 280 ~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~---------------------~~~~~~~~~i~~agH~~-~~~p~~~~~~i 337 (354)
. ++||..|+.|-+||.-.... ..+.+.- ...+..++.+.||||++ .++|+.....+
T Consensus 364 ~-rvliysGD~D~~~p~~gt~~-~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~ 441 (454)
T KOG1282|consen 364 Y-RVLIYSGDHDLVVPFLGTQA-WIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMF 441 (454)
T ss_pred e-EEEEEeCCcceeCcchhhHH-HHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHH
Confidence 5 99999999999998763221 1111110 01123346788999999 89999999999
Q ss_pred HHHHHhhC
Q 018555 338 IDFVKREG 345 (354)
Q Consensus 338 ~~Fl~~~~ 345 (354)
..||....
T Consensus 442 ~~fl~g~~ 449 (454)
T KOG1282|consen 442 QRFLNGQP 449 (454)
T ss_pred HHHHcCCC
Confidence 99998654
No 196
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.15 E-value=0.011 Score=52.09 Aligned_cols=54 Identities=13% Similarity=0.099 Sum_probs=35.6
Q ss_pred HHHHHHHHHHhhCCCCcEEEEEEChhHHHHHHHHHh-ccc-ccccccEEEEecccC
Q 018555 150 EIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRA-NAA-CSRAVRAAIFQAPVS 203 (354)
Q Consensus 150 dl~~~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~-p~~-~~~~v~~lIl~~p~~ 203 (354)
++...+..+.++.+..++++.|||+||.+|..++.. ... ....+..+.+-+|..
T Consensus 113 ~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~v 168 (229)
T cd00519 113 QVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRV 168 (229)
T ss_pred HHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCC
Confidence 444445555545666789999999999999988876 321 122466666666544
No 197
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.13 E-value=0.18 Score=42.43 Aligned_cols=50 Identities=14% Similarity=0.202 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHhhC-CCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecc
Q 018555 148 AMEIDQLISYLINKD-NSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAP 201 (354)
Q Consensus 148 ~~dl~~~i~~l~~~~-~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p 201 (354)
..++..+++-|.... +..++.++|||+|+.++-..+.. .. .++.+|+++.
T Consensus 91 a~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~----~vddvv~~GS 142 (177)
T PF06259_consen 91 APRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGL----RVDDVVLVGS 142 (177)
T ss_pred HHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCC----CcccEEEECC
Confidence 467888888887655 55689999999999998877766 55 8899998763
No 198
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.07 E-value=0.013 Score=50.33 Aligned_cols=70 Identities=14% Similarity=0.246 Sum_probs=45.9
Q ss_pred HHHHHHhhCCcEEEEEcccccCC-CCC-CCC------ccCcHHHHHHHHHHHHhhCCC-CcEEEEEEChhHHHHHHHHHh
Q 018555 115 PLAIALDKERWSLVQFLMTSSYT-GYG-TSS------LQQDAMEIDQLISYLINKDNS-EGVVLLGHSTGCQDIVHYMRA 185 (354)
Q Consensus 115 ~la~~La~~g~~Via~D~R~~~~-G~G-~S~------~~~~~~dl~~~i~~l~~~~~~-~~~~LvGhS~GG~~a~~~a~~ 185 (354)
..+..|.. -.+|++|=+|=... .+- ... ..-...|+.+..++..+.++. .+++|+|||.|+.+..+++.+
T Consensus 37 ~qas~F~~-~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e 115 (207)
T PF11288_consen 37 NQASAFNG-VCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKE 115 (207)
T ss_pred HHhhhhhc-CCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHH
Confidence 34555654 67999999982110 111 000 111246777777777776543 589999999999999999876
No 199
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=96.07 E-value=0.13 Score=46.42 Aligned_cols=102 Identities=15% Similarity=0.024 Sum_probs=60.1
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhC---CcEEEEEcccccCCCCCCC-----CccCcHHHHH----HHHHHHH
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKE---RWSLVQFLMTSSYTGYGTS-----SLQQDAMEID----QLISYLI 159 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~---g~~Via~D~R~~~~G~G~S-----~~~~~~~dl~----~~i~~l~ 159 (354)
.+-|++|+.||--- +.....++.+...+++. .-.++.+|. ... ..+....-+. +++=++.
T Consensus 96 ~k~pvl~~~DG~~~-~~~g~i~~~~dsli~~g~i~pai~vgid~-------~d~~~R~~~~~~n~~~~~~L~~eLlP~v~ 167 (299)
T COG2382 96 EKYPVLYLQDGQDW-FRSGRIPRILDSLIAAGEIPPAILVGIDY-------IDVKKRREELHCNEAYWRFLAQELLPYVE 167 (299)
T ss_pred ccccEEEEeccHHH-HhcCChHHHHHHHHHcCCCCCceEEecCC-------CCHHHHHHHhcccHHHHHHHHHHhhhhhh
Confidence 45689999999331 02233355555555541 234555555 110 0111111222 2333334
Q ss_pred hhCC----CCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCch
Q 018555 160 NKDN----SEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDR 205 (354)
Q Consensus 160 ~~~~----~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~ 205 (354)
+.+. ...-+|+|.|+||.+++..+.. |+ .+..++..+|....
T Consensus 168 ~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe----~FG~V~s~Sps~~~ 214 (299)
T COG2382 168 ERYPTSADADGRVLAGDSLGGLVSLYAGLRHPE----RFGHVLSQSGSFWW 214 (299)
T ss_pred ccCcccccCCCcEEeccccccHHHHHHHhcCch----hhceeeccCCcccc
Confidence 3332 3457899999999999999998 98 99999988886654
No 200
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.02 E-value=0.03 Score=49.16 Aligned_cols=48 Identities=10% Similarity=0.045 Sum_probs=32.6
Q ss_pred HHHHHHHhhCCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecc
Q 018555 153 QLISYLINKDNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAP 201 (354)
Q Consensus 153 ~~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p 201 (354)
+.++.+.+.++ ++++|.|||.||.+|+..+.. .+....+|.++...++
T Consensus 73 ~yl~~~~~~~~-~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDg 121 (224)
T PF11187_consen 73 AYLKKIAKKYP-GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDG 121 (224)
T ss_pred HHHHHHHHhCC-CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeC
Confidence 33444433443 469999999999999999887 4333447888775543
No 201
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=95.76 E-value=0.042 Score=46.48 Aligned_cols=54 Identities=15% Similarity=0.199 Sum_probs=40.2
Q ss_pred cHHHHHHHHHHHHhhCCCCcEEEEEEChhHHHHHHHHHh---cccccccccEEEEec
Q 018555 147 DAMEIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRA---NAACSRAVRAAIFQA 200 (354)
Q Consensus 147 ~~~dl~~~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~---p~~~~~~v~~lIl~~ 200 (354)
...++...++....+.+..+++|+|+|.|+.++..++.. +.....+|.++||.+
T Consensus 63 G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfG 119 (179)
T PF01083_consen 63 GVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFG 119 (179)
T ss_dssp HHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEec
Confidence 356677777776667777899999999999999888765 222234788888865
No 202
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.41 E-value=0.16 Score=43.48 Aligned_cols=106 Identities=12% Similarity=0.143 Sum_probs=61.3
Q ss_pred CCCcEEEEECCCCCCCCccccHH---------------HHHHHHhhCCcEEEEEcccc---cCCCCCCCC--ccCcHHHH
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLE---------------PLAIALDKERWSLVQFLMTS---SYTGYGTSS--LQQDAMEI 151 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~---------------~la~~La~~g~~Via~D~R~---~~~G~G~S~--~~~~~~dl 151 (354)
.+...+|||||-|- -....|. +.++.-.+.||.|+..+-.. .+-+....- ....++..
T Consensus 99 ~~~kLlVLIHGSGv--VrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~ 176 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGV--VRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHA 176 (297)
T ss_pred CccceEEEEecCce--EecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHH
Confidence 45679999999762 1222232 22334344699999987620 111111110 00113333
Q ss_pred HHHHHHHHhhCCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecc
Q 018555 152 DQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAP 201 (354)
Q Consensus 152 ~~~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p 201 (354)
..+-..+......+.+++|.||+||...+.++.+ ++. .+|.++.|.+.
T Consensus 177 ~yvw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d--~~v~aialTDs 225 (297)
T KOG3967|consen 177 KYVWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDD--ESVFAIALTDS 225 (297)
T ss_pred HHHHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCc--cceEEEEeecc
Confidence 3333444433456889999999999999999988 542 37777777543
No 203
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=95.25 E-value=0.057 Score=54.02 Aligned_cols=108 Identities=14% Similarity=0.135 Sum_probs=66.3
Q ss_pred CcEEEEECCCCCCCCccccH--HHHHHHHhhCCcEEEEEcccccCCCCCCC---Cc--cCcHHHHHHHHHHHHhh-----
Q 018555 94 QQQVIFIGGLTDGFFATEYL--EPLAIALDKERWSLVQFLMTSSYTGYGTS---SL--QQDAMEIDQLISYLINK----- 161 (354)
Q Consensus 94 ~p~vIliHG~~~~~~~~~~~--~~la~~La~~g~~Via~D~R~~~~G~G~S---~~--~~~~~dl~~~i~~l~~~----- 161 (354)
-|++|+|||-+-...+...+ ......+..+..-|+.+.+|=...||... .. .....|....++|+.+.
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~FG 191 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSFG 191 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhcC
Confidence 58999999955211221111 22233344457889999998222233222 22 22356888888888873
Q ss_pred CCCCcEEEEEEChhHHHHHHHHHhcccccccccEEEEeccc
Q 018555 162 DNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPV 202 (354)
Q Consensus 162 ~~~~~~~LvGhS~GG~~a~~~a~~p~~~~~~v~~lIl~~p~ 202 (354)
-+.++|+|+|||.||..+-.++..|.. .....++|.++..
T Consensus 192 Gdp~~vTl~G~saGa~~v~~l~~Sp~s-~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 192 GDPKNVTLFGHSAGAASVSLLTLSPHS-RGLFHKAISMSGN 231 (545)
T ss_pred CCCCeEEEEeechhHHHHHHHhcCHhh-HHHHHHHHhhccc
Confidence 357899999999999998777765421 1256666665543
No 204
>PLN02454 triacylglycerol lipase
Probab=95.18 E-value=0.034 Score=52.75 Aligned_cols=56 Identities=23% Similarity=0.258 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHhhCCCCc--EEEEEEChhHHHHHHHHHh-ccc----ccccccEEEEecccCc
Q 018555 149 MEIDQLISYLINKDNSEG--VVLLGHSTGCQDIVHYMRA-NAA----CSRAVRAAIFQAPVSD 204 (354)
Q Consensus 149 ~dl~~~i~~l~~~~~~~~--~~LvGhS~GG~~a~~~a~~-p~~----~~~~v~~lIl~~p~~~ 204 (354)
+++...|+.+.+++..++ +++.|||+||.+|+..|.. -.. ....|..+++-+|-..
T Consensus 210 ~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFGsPRVG 272 (414)
T PLN02454 210 SQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFGSPQVG 272 (414)
T ss_pred HHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeCCCccc
Confidence 355556666666665554 9999999999999998864 111 1123556666666443
No 205
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=95.06 E-value=0.037 Score=49.22 Aligned_cols=39 Identities=21% Similarity=0.187 Sum_probs=33.6
Q ss_pred CCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCc
Q 018555 162 DNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSD 204 (354)
Q Consensus 162 ~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~ 204 (354)
.+.++-.|+|||+||.+++....+ |+ .+...++.+|..-
T Consensus 134 ~~~~~~~i~GhSlGGLfvl~aLL~~p~----~F~~y~~~SPSlW 173 (264)
T COG2819 134 TNSERTAIIGHSLGGLFVLFALLTYPD----CFGRYGLISPSLW 173 (264)
T ss_pred cCcccceeeeecchhHHHHHHHhcCcc----hhceeeeecchhh
Confidence 456779999999999999999998 88 9999999887443
No 206
>PLN00413 triacylglycerol lipase
Probab=94.34 E-value=0.071 Score=51.30 Aligned_cols=35 Identities=17% Similarity=0.310 Sum_probs=27.8
Q ss_pred HHHHHHHHHHhhCCCCcEEEEEEChhHHHHHHHHH
Q 018555 150 EIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMR 184 (354)
Q Consensus 150 dl~~~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~ 184 (354)
++...++.+.++++..++++.|||+||.+|..++.
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 45556666666676778999999999999998875
No 207
>PLN02162 triacylglycerol lipase
Probab=94.25 E-value=0.074 Score=51.07 Aligned_cols=36 Identities=19% Similarity=0.278 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEEEChhHHHHHHHHH
Q 018555 149 MEIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMR 184 (354)
Q Consensus 149 ~dl~~~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~ 184 (354)
+++.+.++.+..+.+..++++.|||+||.+|..++.
T Consensus 262 ~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 262 YTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 345555555555566678999999999999988765
No 208
>PLN02571 triacylglycerol lipase
Probab=93.95 E-value=0.09 Score=50.00 Aligned_cols=36 Identities=19% Similarity=0.259 Sum_probs=24.9
Q ss_pred HHHHHHHHHHhhCCCC--cEEEEEEChhHHHHHHHHHh
Q 018555 150 EIDQLISYLINKDNSE--GVVLLGHSTGCQDIVHYMRA 185 (354)
Q Consensus 150 dl~~~i~~l~~~~~~~--~~~LvGhS~GG~~a~~~a~~ 185 (354)
++...++.+.+++..+ ++++.||||||.+|...|..
T Consensus 209 qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 209 QVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 3444444444444333 68999999999999988864
No 209
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=93.87 E-value=0.24 Score=45.92 Aligned_cols=63 Identities=13% Similarity=0.130 Sum_probs=45.7
Q ss_pred hcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCCe-EEEecCCCcccCccHHHHHHHHHHHHHhhC
Q 018555 275 LGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGGAE-KVEIEHGIHSLSNRVKEAVQAIIDFVKREG 345 (354)
Q Consensus 275 l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~~-~~~i~~agH~~~~~p~~~~~~i~~Fl~~~~ 345 (354)
..++.. |-.+|.|..|++.+++ -.+.+...+|+.+ +.++||..|... +..+.+.+..|+.+..
T Consensus 325 ~~RLal-pKyivnaSgDdff~pD-----sa~lYyd~LPG~kaLrmvPN~~H~~~--n~~i~esl~~flnrfq 388 (507)
T COG4287 325 QLRLAL-PKYIVNASGDDFFVPD-----SANLYYDDLPGEKALRMVPNDPHNLI--NQFIKESLEPFLNRFQ 388 (507)
T ss_pred hhhccc-cceeecccCCcccCCC-----ccceeeccCCCceeeeeCCCCcchhh--HHHHHHHHHHHHHHHh
Confidence 357788 9999999999888776 4556667778855 688999999984 2344555666666554
No 210
>PLN02408 phospholipase A1
Probab=93.78 E-value=0.1 Score=48.90 Aligned_cols=36 Identities=19% Similarity=0.233 Sum_probs=25.6
Q ss_pred HHHHHHHHHHhhCCCC--cEEEEEEChhHHHHHHHHHh
Q 018555 150 EIDQLISYLINKDNSE--GVVLLGHSTGCQDIVHYMRA 185 (354)
Q Consensus 150 dl~~~i~~l~~~~~~~--~~~LvGhS~GG~~a~~~a~~ 185 (354)
++.+.|+.+.++++.+ ++++.|||+||.+|...|..
T Consensus 183 qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 183 MVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 3444445555555433 59999999999999988875
No 211
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=93.77 E-value=0.26 Score=48.34 Aligned_cols=99 Identities=17% Similarity=0.096 Sum_probs=67.2
Q ss_pred CcEEEEECCCCC----CCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHh---hCC--C
Q 018555 94 QQQVIFIGGLTD----GFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLIN---KDN--S 164 (354)
Q Consensus 94 ~p~vIliHG~~~----~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~---~~~--~ 164 (354)
+-.|+-+||.|= .-....|.+.++..| |+-|+.+|+ .=--...+++..+++--+.-|+.+ .+| .
T Consensus 396 ~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL---~cPiiSVdY----SLAPEaPFPRaleEv~fAYcW~inn~allG~Tg 468 (880)
T KOG4388|consen 396 RSLIVHCHGGGFVAQSSKSHEPYLRSWAQAL---GCPIISVDY----SLAPEAPFPRALEEVFFAYCWAINNCALLGSTG 468 (880)
T ss_pred ceEEEEecCCceeeeccccccHHHHHHHHHh---CCCeEEeee----ccCCCCCCCcHHHHHHHHHHHHhcCHHHhCccc
Confidence 446677788441 112234456666665 899999999 444555677777777766677765 233 4
Q ss_pred CcEEEEEEChhHHHHHHHHHh-cccccccccEEEEe
Q 018555 165 EGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQ 199 (354)
Q Consensus 165 ~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~ 199 (354)
++|+++|-|.||.+++-.+.+ -+.+...-+||+|.
T Consensus 469 Eriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~la 504 (880)
T KOG4388|consen 469 ERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLA 504 (880)
T ss_pred ceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEe
Confidence 899999999999998888876 33344456788874
No 212
>PLN02934 triacylglycerol lipase
Probab=93.66 E-value=0.1 Score=50.66 Aligned_cols=35 Identities=17% Similarity=0.311 Sum_probs=28.2
Q ss_pred HHHHHHHHHHhhCCCCcEEEEEEChhHHHHHHHHH
Q 018555 150 EIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMR 184 (354)
Q Consensus 150 dl~~~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~ 184 (354)
.+...++.+.++++..++++.|||+||.+|..++.
T Consensus 306 ~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 306 AVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 45566666666777779999999999999998874
No 213
>PLN02310 triacylglycerol lipase
Probab=93.32 E-value=0.16 Score=48.14 Aligned_cols=21 Identities=19% Similarity=0.159 Sum_probs=18.5
Q ss_pred CcEEEEEEChhHHHHHHHHHh
Q 018555 165 EGVVLLGHSTGCQDIVHYMRA 185 (354)
Q Consensus 165 ~~~~LvGhS~GG~~a~~~a~~ 185 (354)
.++++.|||+||.+|+..|..
T Consensus 209 ~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 209 VSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred ceEEEEcccHHHHHHHHHHHH
Confidence 479999999999999988864
No 214
>PLN02324 triacylglycerol lipase
Probab=92.82 E-value=0.17 Score=48.08 Aligned_cols=36 Identities=17% Similarity=0.199 Sum_probs=25.7
Q ss_pred HHHHHHHHHHhhCCC--CcEEEEEEChhHHHHHHHHHh
Q 018555 150 EIDQLISYLINKDNS--EGVVLLGHSTGCQDIVHYMRA 185 (354)
Q Consensus 150 dl~~~i~~l~~~~~~--~~~~LvGhS~GG~~a~~~a~~ 185 (354)
++.+-|..|.+++.. ..|++.|||+||.+|+..|..
T Consensus 198 qVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 198 QVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 444445555555543 369999999999999988854
No 215
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=92.70 E-value=0.29 Score=45.69 Aligned_cols=43 Identities=19% Similarity=0.229 Sum_probs=31.6
Q ss_pred CCCCcEEEEEEChhHHHHHHHHHh-cc-cccccccEEEEecccCc
Q 018555 162 DNSEGVVLLGHSTGCQDIVHYMRA-NA-ACSRAVRAAIFQAPVSD 204 (354)
Q Consensus 162 ~~~~~~~LvGhS~GG~~a~~~a~~-p~-~~~~~v~~lIl~~p~~~ 204 (354)
.+..|+.|||||+|+.+....+.+ .+ .....|+-++|++....
T Consensus 217 ~G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~ 261 (345)
T PF05277_consen 217 QGERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVP 261 (345)
T ss_pred CCCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCC
Confidence 466789999999999999887766 33 22235788888875443
No 216
>PLN02847 triacylglycerol lipase
Probab=92.44 E-value=0.21 Score=49.41 Aligned_cols=31 Identities=13% Similarity=0.139 Sum_probs=23.2
Q ss_pred HHHHHhhCCCCcEEEEEEChhHHHHHHHHHh
Q 018555 155 ISYLINKDNSEGVVLLGHSTGCQDIVHYMRA 185 (354)
Q Consensus 155 i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~ 185 (354)
+..+...++.-+++|+|||+||.+|..++..
T Consensus 241 L~kal~~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 241 LLKALDEYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHHHHHCCCCeEEEeccChHHHHHHHHHHH
Confidence 3333445555689999999999999887754
No 217
>PLN03037 lipase class 3 family protein; Provisional
Probab=92.15 E-value=0.19 Score=49.04 Aligned_cols=21 Identities=19% Similarity=0.175 Sum_probs=18.5
Q ss_pred CcEEEEEEChhHHHHHHHHHh
Q 018555 165 EGVVLLGHSTGCQDIVHYMRA 185 (354)
Q Consensus 165 ~~~~LvGhS~GG~~a~~~a~~ 185 (354)
.+++|.|||+||.+|+..|..
T Consensus 318 ~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred ceEEEeccCHHHHHHHHHHHH
Confidence 469999999999999988854
No 218
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=92.13 E-value=0.44 Score=44.93 Aligned_cols=97 Identities=20% Similarity=0.190 Sum_probs=60.4
Q ss_pred cEEEEECCCCCC----CCccccHHHHHHHHhhCCcEEEEEccc--ccCCCCCCCC-----------ccCcHHHHHHHHHH
Q 018555 95 QQVIFIGGLTDG----FFATEYLEPLAIALDKERWSLVQFLMT--SSYTGYGTSS-----------LQQDAMEIDQLISY 157 (354)
Q Consensus 95 p~vIliHG~~~~----~~~~~~~~~la~~La~~g~~Via~D~R--~~~~G~G~S~-----------~~~~~~dl~~~i~~ 157 (354)
-+|+|--|.-++ ..+..+...++..|. =-+|-..+| +.-.-||..+ .++...|.+.++.+
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~---AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~ 157 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPELK---ALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTF 157 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhhC---ceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHH
Confidence 567777776521 112223234555553 467777885 1112334332 12335789999999
Q ss_pred HHhhCC--CCcEEEEEEChhHHHHHHHHHh-cccccccccEEEE
Q 018555 158 LINKDN--SEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIF 198 (354)
Q Consensus 158 l~~~~~--~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl 198 (354)
|++.++ ..+++.+|-|+||+++..+=.+ |. .|.|.+.
T Consensus 158 lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPH----iv~GAlA 197 (492)
T KOG2183|consen 158 LKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPH----IVLGALA 197 (492)
T ss_pred HhhccccccCcEEEecCchhhHHHHHHHhcChh----hhhhhhh
Confidence 988654 3589999999999999888777 75 5555443
No 219
>PLN02802 triacylglycerol lipase
Probab=92.06 E-value=0.24 Score=48.13 Aligned_cols=35 Identities=17% Similarity=0.203 Sum_probs=24.2
Q ss_pred HHHHHHHHHhhCCC--CcEEEEEEChhHHHHHHHHHh
Q 018555 151 IDQLISYLINKDNS--EGVVLLGHSTGCQDIVHYMRA 185 (354)
Q Consensus 151 l~~~i~~l~~~~~~--~~~~LvGhS~GG~~a~~~a~~ 185 (354)
+.+-+..+.+++.. .++++.|||+||.+|...|..
T Consensus 314 Vl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 314 VVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 33334444444432 368999999999999988865
No 220
>PLN02753 triacylglycerol lipase
Probab=91.89 E-value=0.24 Score=48.39 Aligned_cols=36 Identities=17% Similarity=0.202 Sum_probs=25.5
Q ss_pred HHHHHHHHHHhhCC-----CCcEEEEEEChhHHHHHHHHHh
Q 018555 150 EIDQLISYLINKDN-----SEGVVLLGHSTGCQDIVHYMRA 185 (354)
Q Consensus 150 dl~~~i~~l~~~~~-----~~~~~LvGhS~GG~~a~~~a~~ 185 (354)
++.+.|+.+.+++. ..++++.|||+||.+|...|..
T Consensus 292 QVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 292 QILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 44444555554443 2589999999999999988853
No 221
>PLN02719 triacylglycerol lipase
Probab=91.52 E-value=0.3 Score=47.58 Aligned_cols=36 Identities=17% Similarity=0.181 Sum_probs=25.1
Q ss_pred HHHHHHHHHHhhCCC-----CcEEEEEEChhHHHHHHHHHh
Q 018555 150 EIDQLISYLINKDNS-----EGVVLLGHSTGCQDIVHYMRA 185 (354)
Q Consensus 150 dl~~~i~~l~~~~~~-----~~~~LvGhS~GG~~a~~~a~~ 185 (354)
++.+.|..|.+++.. .++++.|||+||.+|...|..
T Consensus 278 QVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 278 QVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 344444445544432 379999999999999988854
No 222
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=91.39 E-value=6.8 Score=32.64 Aligned_cols=51 Identities=16% Similarity=0.182 Sum_probs=39.7
Q ss_pred HHHHHHHHHhhCCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecccCch
Q 018555 151 IDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAPVSDR 205 (354)
Q Consensus 151 l~~~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p~~~~ 205 (354)
-++...++.++.-....++-|-||||..|..+.-+ |+ ...++|.++.+.+.
T Consensus 87 H~AyerYv~eEalpgs~~~sgcsmGayhA~nfvfrhP~----lftkvialSGvYda 138 (227)
T COG4947 87 HRAYERYVIEEALPGSTIVSGCSMGAYHAANFVFRHPH----LFTKVIALSGVYDA 138 (227)
T ss_pred HHHHHHHHHHhhcCCCccccccchhhhhhhhhheeChh----HhhhheeecceeeH
Confidence 34455666654334668889999999999999998 98 99999998877664
No 223
>PLN02761 lipase class 3 family protein
Probab=91.14 E-value=0.31 Score=47.53 Aligned_cols=36 Identities=14% Similarity=0.144 Sum_probs=24.6
Q ss_pred HHHHHHHHHHhhCC------CCcEEEEEEChhHHHHHHHHHh
Q 018555 150 EIDQLISYLINKDN------SEGVVLLGHSTGCQDIVHYMRA 185 (354)
Q Consensus 150 dl~~~i~~l~~~~~------~~~~~LvGhS~GG~~a~~~a~~ 185 (354)
++...|..|.+.++ ..++++.|||+||.+|...|..
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 34444445544442 2369999999999999988753
No 224
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=90.71 E-value=0.36 Score=45.41 Aligned_cols=87 Identities=16% Similarity=0.133 Sum_probs=48.6
Q ss_pred CCCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCC-CCCCccCc------HHHHHHHHHHHHhhCC
Q 018555 91 GDYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGY-GTSSLQQD------AMEIDQLISYLINKDN 163 (354)
Q Consensus 91 ~~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~-G~S~~~~~------~~dl~~~i~~l~~~~~ 163 (354)
...+-.|||.||+-. ++..+|...+....+.--.. .+..| |+ +......+ ......+++.+. .+.
T Consensus 77 ~k~~HLvVlthGi~~--~~~~~~~~~~~~~~kk~p~~-~iv~~----g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~-~~s 148 (405)
T KOG4372|consen 77 TKPKHLVVLTHGLHG--ADMEYWKEKIEQMTKKMPDK-LIVVR----GKMNNMCQTFDGVDVLGERLAEEVKETLY-DYS 148 (405)
T ss_pred cCCceEEEecccccc--ccHHHHHHHHHhhhcCCCcc-eEeee----ccccchhhccccceeeecccHHHHhhhhh-ccc
Confidence 345679999999883 46788887777776532222 33332 22 22211110 111122233222 123
Q ss_pred CCcEEEEEEChhHHHHHHHHHh
Q 018555 164 SEGVVLLGHSTGCQDIVHYMRA 185 (354)
Q Consensus 164 ~~~~~LvGhS~GG~~a~~~a~~ 185 (354)
++++-.||||+||.++......
T Consensus 149 i~kISfvghSLGGLvar~AIgy 170 (405)
T KOG4372|consen 149 IEKISFVGHSLGGLVARYAIGY 170 (405)
T ss_pred cceeeeeeeecCCeeeeEEEEe
Confidence 6899999999999887554443
No 225
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=90.58 E-value=0.47 Score=40.21 Aligned_cols=65 Identities=14% Similarity=0.074 Sum_probs=46.1
Q ss_pred CCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCC--CeEEEecCCCccc-Cc---cHHHHHHHHHHHHHh
Q 018555 277 HMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGG--AEKVEIEHGIHSL-SN---RVKEAVQAIIDFVKR 343 (354)
Q Consensus 277 ~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~--~~~~~i~~agH~~-~~---~p~~~~~~i~~Fl~~ 343 (354)
.|+.+++|-|-|+.|.++..-. -..+..+...+|. ...++.+|+||+- .. -.+++.-.|.+|+.+
T Consensus 131 aI~~taLlTVEGe~DDIsg~GQ--T~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 131 AIRRTALLTVEGERDDISGPGQ--THAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred HcccceeEEeecCcccCCcchH--HHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 3444488889999999997652 2244556555665 3457899999998 43 246788999999875
No 226
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=90.45 E-value=0.82 Score=42.46 Aligned_cols=63 Identities=19% Similarity=0.181 Sum_probs=44.2
Q ss_pred CCCcEEEEeeCCCCCCCchhcHHHHHHHHH--------------------HHcCC-CeEEEecCCCcccCccHHHHHHHH
Q 018555 279 ANTPCQVIFSMADEYVPEYVDKKALVERLC--------------------RAMGG-AEKVEIEHGIHSLSNRVKEAVQAI 337 (354)
Q Consensus 279 ~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~--------------------~~~~~-~~~~~i~~agH~~~~~p~~~~~~i 337 (354)
.. ++|+..|+.|-+||.-. .+.+.+.+. +...+ ..++.|.+|||++..+|+...+.+
T Consensus 233 ~i-~VliY~Gd~D~icn~~g-~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~~qP~~al~m~ 310 (319)
T PLN02213 233 GY-RSLIYSGDHDIAVPFLA-TQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAEYRPNETFIMF 310 (319)
T ss_pred Cc-eEEEEECCcCeeCCcHh-HHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCCcCHHHHHHHH
Confidence 35 99999999999888651 112222222 00112 556778899999966899999999
Q ss_pred HHHHHh
Q 018555 338 IDFVKR 343 (354)
Q Consensus 338 ~~Fl~~ 343 (354)
..||..
T Consensus 311 ~~fi~~ 316 (319)
T PLN02213 311 QRWISG 316 (319)
T ss_pred HHHHcC
Confidence 999975
No 227
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=89.09 E-value=0.62 Score=43.61 Aligned_cols=37 Identities=19% Similarity=0.098 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEEEChhHHHHHHHHHh
Q 018555 149 MEIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRA 185 (354)
Q Consensus 149 ~dl~~~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~ 185 (354)
..+.+.++.|...+..-++++-|||+||.+|...|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 5677777777777777789999999999999988875
No 228
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=88.36 E-value=2.1 Score=45.80 Aligned_cols=91 Identities=16% Similarity=0.140 Sum_probs=57.1
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCc---c-CcHHHHHH-HHHHHHhhCCCCc
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSL---Q-QDAMEIDQ-LISYLINKDNSEG 166 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~---~-~~~~dl~~-~i~~l~~~~~~~~ 166 (354)
...|++.|+|-.- +.....+.++..|.= +.||.-.. | +.++++++ .|+.+++.-+..+
T Consensus 2121 se~~~~Ffv~pIE---G~tt~l~~la~rle~--------------PaYglQ~T~~vP~dSies~A~~yirqirkvQP~GP 2183 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIE---GFTTALESLASRLEI--------------PAYGLQCTEAVPLDSIESLAAYYIRQIRKVQPEGP 2183 (2376)
T ss_pred ccCCceEEEeccc---cchHHHHHHHhhcCC--------------cchhhhccccCCcchHHHHHHHHHHHHHhcCCCCC
Confidence 5678999999988 556666777766542 33343221 1 22344433 3444444445678
Q ss_pred EEEEEEChhHHHHHHHHHh-cccccccccEEEEecc
Q 018555 167 VVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAP 201 (354)
Q Consensus 167 ~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p 201 (354)
..|+|.|+|+.++...|.. .+ . .....+|+++.
T Consensus 2184 Yrl~GYSyG~~l~f~ma~~Lqe-~-~~~~~lillDG 2217 (2376)
T KOG1202|consen 2184 YRLAGYSYGACLAFEMASQLQE-Q-QSPAPLILLDG 2217 (2376)
T ss_pred eeeeccchhHHHHHHHHHHHHh-h-cCCCcEEEecC
Confidence 9999999999999998875 21 1 14455888765
No 229
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=88.23 E-value=1.2 Score=43.98 Aligned_cols=78 Identities=15% Similarity=0.204 Sum_probs=44.5
Q ss_pred CcEEEEEcccc---cCCCCCCCCccC--cHHHHHHHHHHHHh-hCC-CCcEEEEEEChhHHHHHHHHHh------ccc--
Q 018555 124 RWSLVQFLMTS---SYTGYGTSSLQQ--DAMEIDQLISYLIN-KDN-SEGVVLLGHSTGCQDIVHYMRA------NAA-- 188 (354)
Q Consensus 124 g~~Via~D~R~---~~~G~G~S~~~~--~~~dl~~~i~~l~~-~~~-~~~~~LvGhS~GG~~a~~~a~~------p~~-- 188 (354)
+.|++..+++. .|++...+..+. .+.-..++++.|.. .+| ..+++.|||||||.++=.++.. |+.
T Consensus 478 ~~Rii~l~Y~Tsit~w~~~~p~e~~r~sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~ 557 (697)
T KOG2029|consen 478 KSRIIGLEYTTSITDWRARCPAEAHRRSLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSN 557 (697)
T ss_pred cceEEEeecccchhhhcccCcccchhhHHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhh
Confidence 56888888863 234433322111 22333345555544 244 5689999999999988666543 211
Q ss_pred ccccccEEEEecc
Q 018555 189 CSRAVRAAIFQAP 201 (354)
Q Consensus 189 ~~~~v~~lIl~~p 201 (354)
-.....|+|+++.
T Consensus 558 l~kNtrGiiFls~ 570 (697)
T KOG2029|consen 558 LNKNTRGIIFLSV 570 (697)
T ss_pred hhccCCceEEEec
Confidence 1125677887764
No 230
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=85.02 E-value=4.1 Score=35.75 Aligned_cols=62 Identities=19% Similarity=0.281 Sum_probs=36.6
Q ss_pred CcEEEEEccc-ccCC--CCCCCCccCcHHH-HHHHHHHHHhhC-CCCcEEEEEEChhHHHHHHHHHh
Q 018555 124 RWSLVQFLMT-SSYT--GYGTSSLQQDAME-IDQLISYLINKD-NSEGVVLLGHSTGCQDIVHYMRA 185 (354)
Q Consensus 124 g~~Via~D~R-~~~~--G~G~S~~~~~~~d-l~~~i~~l~~~~-~~~~~~LvGhS~GG~~a~~~a~~ 185 (354)
|+.+..+++. +.|+ |.+..+..+.+.+ .+.+.+.+.... ..++++++|+|+|+.++...+.+
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~ 68 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRR 68 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHH
Confidence 5677777775 2333 2333334433322 223333333211 45789999999999999888776
No 231
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=84.47 E-value=4.3 Score=37.68 Aligned_cols=78 Identities=12% Similarity=0.162 Sum_probs=49.2
Q ss_pred EEEEEcccccCCCCCCCCcc------Cc---HHHHHHHHHHHHh---hCCCCcEEEEEEChhHHHHHHHHHh-ccc----
Q 018555 126 SLVQFLMTSSYTGYGTSSLQ------QD---AMEIDQLISYLIN---KDNSEGVVLLGHSTGCQDIVHYMRA-NAA---- 188 (354)
Q Consensus 126 ~Via~D~R~~~~G~G~S~~~------~~---~~dl~~~i~~l~~---~~~~~~~~LvGhS~GG~~a~~~a~~-p~~---- 188 (354)
+|+-+|.+ -|-|-|... .+ ++|+-.+++.+.+ ++...+++|.|-|+||.-+-.+|.+ -+.
T Consensus 3 NvLfiDqP---vGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~ 79 (319)
T PLN02213 3 NIIFLDQP---VGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYIC 79 (319)
T ss_pred cEEEecCC---CCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccc
Confidence 67888985 466665321 12 2344443333333 3446789999999999988777765 211
Q ss_pred --ccccccEEEEecccCchH
Q 018555 189 --CSRAVRAAIFQAPVSDRE 206 (354)
Q Consensus 189 --~~~~v~~lIl~~p~~~~~ 206 (354)
....++|+++-+|..++.
T Consensus 80 ~~~~inLkGi~IGNg~t~~~ 99 (319)
T PLN02213 80 CEPPINLQGYMLGNPVTYMD 99 (319)
T ss_pred cCCceeeeEEEeCCCCCCcc
Confidence 124688999988876553
No 232
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=83.88 E-value=4.8 Score=39.23 Aligned_cols=102 Identities=14% Similarity=0.103 Sum_probs=58.1
Q ss_pred CCcEEEEECCCCCCCCccccHHHHHHHHhh---CC---------------cEEEEEcccccCCCCCCCCc---------c
Q 018555 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDK---ER---------------WSLVQFLMTSSYTGYGTSSL---------Q 145 (354)
Q Consensus 93 ~~p~vIliHG~~~~~~~~~~~~~la~~La~---~g---------------~~Via~D~R~~~~G~G~S~~---------~ 145 (354)
.+|+|+.+-|-+ +++..|-.+.+.=.+ .+ =.++-+|+. -|-|-|.- .
T Consensus 100 ~rPvi~wlNGGP---GcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqP---vGTGfS~a~~~e~~~d~~ 173 (498)
T COG2939 100 NRPVIFWLNGGP---GCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQP---VGTGFSRALGDEKKKDFE 173 (498)
T ss_pred CCceEEEecCCC---ChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecC---cccCcccccccccccchh
Confidence 478999999977 555555444221000 01 145555643 45555431 1
Q ss_pred CcHHHHHHHHHHHHh---hCCC--CcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecc
Q 018555 146 QDAMEIDQLISYLIN---KDNS--EGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAP 201 (354)
Q Consensus 146 ~~~~dl~~~i~~l~~---~~~~--~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p 201 (354)
...+|+..+.+.+.+ ++.. .+.+|+|.|+||.=+..+|.. .++. ...+++|++.+
T Consensus 174 ~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~-~~~~~~~nlss 234 (498)
T COG2939 174 GAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDN-IALNGNVNLSS 234 (498)
T ss_pred ccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhc-cccCCceEeee
Confidence 223566655555544 2333 489999999999988888876 3311 23556665544
No 233
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=82.73 E-value=12 Score=36.37 Aligned_cols=98 Identities=15% Similarity=0.049 Sum_probs=67.6
Q ss_pred CCCCcEEEEECCCCCCCCc-------cccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCc--------------cCcHH
Q 018555 91 GDYQQQVIFIGGLTDGFFA-------TEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSL--------------QQDAM 149 (354)
Q Consensus 91 ~~~~p~vIliHG~~~~~~~-------~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~--------------~~~~~ 149 (354)
...+|..|+|+|=|. .+ ...|..+|+. -|=.|+...+| =||.|.. .+..+
T Consensus 83 ~~~gPiFLmIGGEgp--~~~~wv~~~~~~~~~~Akk---fgA~v~~lEHR----FYG~S~P~~~~st~nlk~LSs~QALa 153 (514)
T KOG2182|consen 83 KPGGPIFLMIGGEGP--ESDKWVGNENLTWLQWAKK---FGATVFQLEHR----FYGQSSPIGDLSTSNLKYLSSLQALA 153 (514)
T ss_pred cCCCceEEEEcCCCC--CCCCccccCcchHHHHHHH---hCCeeEEeeee----ccccCCCCCCCcccchhhhhHHHHHH
Confidence 366899999999442 22 1124444444 46789999995 5665521 12357
Q ss_pred HHHHHHHHHHhhCCC---CcEEEEEEChhHHHHHHHHHh-cccccccccEEEEecc
Q 018555 150 EIDQLISYLINKDNS---EGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIFQAP 201 (354)
Q Consensus 150 dl~~~i~~l~~~~~~---~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl~~p 201 (354)
|++.+|+.+..+.+. .+.+.+|-|+-|.++..+=.+ |+ .+.|-|.-+.
T Consensus 154 Dla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPe----l~~GsvASSa 205 (514)
T KOG2182|consen 154 DLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPE----LTVGSVASSA 205 (514)
T ss_pred HHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCch----hheeeccccc
Confidence 888888888776542 389999999999999877666 88 8877776543
No 234
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=81.60 E-value=3.4 Score=35.45 Aligned_cols=68 Identities=15% Similarity=0.132 Sum_probs=45.0
Q ss_pred CCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhhC
Q 018555 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKD 162 (354)
Q Consensus 93 ~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~~ 162 (354)
..++|+++||-.|.......-..+.+.|.++|..+...-+.+ .|||........+....+++++.+.+
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~--~gH~~~~~~~~~~~~~~~~~f~~~~l 210 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPG--EGHGFGNPENRRDWYERILDFFDKYL 210 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT---SSSTTSHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCc--CCCCCCCchhHHHHHHHHHHHHHHHc
Confidence 578999999988654444445678888888887665555521 46655544444566777788877644
No 235
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=81.30 E-value=1.7 Score=35.70 Aligned_cols=69 Identities=10% Similarity=0.160 Sum_probs=42.9
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhhCCCCcEEEEE
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLG 171 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~~~~~~~~LvG 171 (354)
.+...||+..||+ ........|. |.+..=-++.+|++ |+.--.+.-. ...+-||.
T Consensus 9 qgd~LIvyFaGwg---tpps~v~HLi--lpeN~dl~lcYDY~----------------dl~ldfDfsA----y~hirlvA 63 (214)
T COG2830 9 QGDHLIVYFAGWG---TPPSAVNHLI--LPENHDLLLCYDYQ----------------DLNLDFDFSA----YRHIRLVA 63 (214)
T ss_pred CCCEEEEEEecCC---CCHHHHhhcc--CCCCCcEEEEeehh----------------hcCcccchhh----hhhhhhhh
Confidence 3445899999999 5555555553 44423356788884 1111111111 35677999
Q ss_pred EChhHHHHHHHHHh
Q 018555 172 HSTGCQDIVHYMRA 185 (354)
Q Consensus 172 hS~GG~~a~~~a~~ 185 (354)
+|||-.+|-+++..
T Consensus 64 wSMGVwvAeR~lqg 77 (214)
T COG2830 64 WSMGVWVAERVLQG 77 (214)
T ss_pred hhHHHHHHHHHHhh
Confidence 99999999877654
No 236
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=81.21 E-value=21 Score=32.94 Aligned_cols=90 Identities=18% Similarity=0.225 Sum_probs=58.2
Q ss_pred CCCcEEEEECCCCCCCCccc--cHHHHHHHHhh-CCcEEEEEcccccCCCCCCCCccCc--------------------H
Q 018555 92 DYQQQVIFIGGLTDGFFATE--YLEPLAIALDK-ERWSLVQFLMTSSYTGYGTSSLQQD--------------------A 148 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~--~~~~la~~La~-~g~~Via~D~R~~~~G~G~S~~~~~--------------------~ 148 (354)
..+..|+|+-|....++... .--.|...|.. .+-+++++-. .|-|.-.+... .
T Consensus 29 s~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd----~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~ 104 (423)
T COG3673 29 SMKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYD----EGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLV 104 (423)
T ss_pred CcceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEec----CCcccccchhhHHHHHhhhhhhhHHHHHHHHH
Confidence 34667888888665544333 23456666665 4677777665 57665533211 3
Q ss_pred HHHHHHHHHHHhhCC-CCcEEEEEEChhHHHHHHHHHh
Q 018555 149 MEIDQLISYLINKDN-SEGVVLLGHSTGCQDIVHYMRA 185 (354)
Q Consensus 149 ~dl~~~i~~l~~~~~-~~~~~LvGhS~GG~~a~~~a~~ 185 (354)
..|..+-.+|...+. ..+|+++|+|-|+.+|-.+|..
T Consensus 105 ~nI~~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 105 QNIREAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 456666666666443 3689999999999999777764
No 237
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=80.42 E-value=2.3 Score=38.24 Aligned_cols=36 Identities=14% Similarity=0.006 Sum_probs=27.5
Q ss_pred HHHHHHHHHHhhCCCCcEEEEEEChhHHHHHHHHHh
Q 018555 150 EIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRA 185 (354)
Q Consensus 150 dl~~~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~ 185 (354)
+..++...+++.+...++.|-|||+||.+|..+..+
T Consensus 261 a~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~ 296 (425)
T COG5153 261 AALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIR 296 (425)
T ss_pred HHHHHHHHHHHhCCCceEEEeccccchHHHHHhccc
Confidence 344445555667788899999999999999877665
No 238
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=80.42 E-value=2.3 Score=38.24 Aligned_cols=36 Identities=14% Similarity=0.006 Sum_probs=27.5
Q ss_pred HHHHHHHHHHhhCCCCcEEEEEEChhHHHHHHHHHh
Q 018555 150 EIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRA 185 (354)
Q Consensus 150 dl~~~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~ 185 (354)
+..++...+++.+...++.|-|||+||.+|..+..+
T Consensus 261 a~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~ 296 (425)
T KOG4540|consen 261 AALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIR 296 (425)
T ss_pred HHHHHHHHHHHhCCCceEEEeccccchHHHHHhccc
Confidence 344445555667788899999999999999877665
No 239
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=78.52 E-value=1.9 Score=29.54 Aligned_cols=19 Identities=16% Similarity=0.228 Sum_probs=10.1
Q ss_pred CCCcEEEEECCCCCCCCccccH
Q 018555 92 DYQQQVIFIGGLTDGFFATEYL 113 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~ 113 (354)
..+|+|+|.||+. .+...|
T Consensus 41 ~~k~pVll~HGL~---~ss~~w 59 (63)
T PF04083_consen 41 KKKPPVLLQHGLL---QSSDDW 59 (63)
T ss_dssp TT--EEEEE--TT-----GGGG
T ss_pred CCCCcEEEECCcc---cChHHH
Confidence 3579999999999 666655
No 240
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=77.32 E-value=12 Score=31.45 Aligned_cols=40 Identities=15% Similarity=0.127 Sum_probs=30.6
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcc
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLM 132 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~ 132 (354)
+.++.+|++-|+.+. +-+..-..+.+.|.++|++|+..|-
T Consensus 20 ~~~~~viW~TGLSGs-GKSTiA~ale~~L~~~G~~~y~LDG 59 (197)
T COG0529 20 GQKGAVIWFTGLSGS-GKSTIANALEEKLFAKGYHVYLLDG 59 (197)
T ss_pred CCCCeEEEeecCCCC-CHHHHHHHHHHHHHHcCCeEEEecC
Confidence 456789999998843 3444456778888889999999984
No 241
>PLN02834 3-dehydroquinate synthase
Probab=74.75 E-value=86 Score=30.48 Aligned_cols=45 Identities=18% Similarity=0.133 Sum_probs=28.1
Q ss_pred ccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHh
Q 018555 111 EYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLIN 160 (354)
Q Consensus 111 ~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~ 160 (354)
.+.+.+.+.|.+.|+.+..+|.- -.-|.. ....+.+.++++.+.+
T Consensus 114 ~~~~~v~~~L~~~g~~~~v~~~v---~~~gE~--~ksl~~v~~~~~~l~~ 158 (433)
T PLN02834 114 LYLEKVVEALTAKGPELTVESVI---LPDGEK--YKDMETLMKVFDKALE 158 (433)
T ss_pred HHHHHHHHHHHhcCCceEEEEEE---ecCCcC--CCCHHHHHHHHHHHHh
Confidence 37778888898888866665531 011222 2346778888887765
No 242
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=74.65 E-value=9.3 Score=39.00 Aligned_cols=69 Identities=16% Similarity=0.243 Sum_probs=49.6
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhhC
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKD 162 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~~ 162 (354)
..+.+|++|||..|.......-..+.+.|..+|..|-..=+.+ -||+.+.......-+..+++++.+.+
T Consensus 549 ~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~--e~H~~~~~~~~~~~~~~~~~~~~~~~ 617 (620)
T COG1506 549 NIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPD--EGHGFSRPENRVKVLKEILDWFKRHL 617 (620)
T ss_pred ccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCC--CCcCCCCchhHHHHHHHHHHHHHHHh
Confidence 4467899999988755555556778888988888776666521 46777765556777888888887643
No 243
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=72.36 E-value=5.8 Score=34.25 Aligned_cols=59 Identities=20% Similarity=0.189 Sum_probs=37.9
Q ss_pred CcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHH
Q 018555 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLI 159 (354)
Q Consensus 94 ~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~ 159 (354)
+.+|+++||-.|.......-+...+.|.+.|.+|-...+ .|.|.+-.+ +.+.++.++|.
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~----~g~gH~i~~---~~~~~~~~~l~ 213 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEY----PGGGHEISP---EELRDLREFLE 213 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEE----TT-SSS--H---HHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEc----CCCCCCCCH---HHHHHHHHHHh
Confidence 568999999988766666678889999988887777777 555554444 44444555544
No 244
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=71.92 E-value=6.1 Score=39.38 Aligned_cols=51 Identities=12% Similarity=0.178 Sum_probs=34.6
Q ss_pred cCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHH-c--CCCeEEEecCCCccc
Q 018555 276 GHMANTPCQVIFSMADEYVPEYVDKKALVERLCRA-M--GGAEKVEIEHGIHSL 326 (354)
Q Consensus 276 ~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~-~--~~~~~~~i~~agH~~ 326 (354)
++|+-+|+++|||..|.++|.......+....++. . ...+++.|+++-|+-
T Consensus 551 g~L~GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHfD 604 (690)
T PF10605_consen 551 GNLHGKPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHFD 604 (690)
T ss_pred CCcCCCceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeech
Confidence 35533699999999999999864443344332221 1 235678899999997
No 245
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=71.69 E-value=82 Score=28.85 Aligned_cols=66 Identities=17% Similarity=0.098 Sum_probs=46.7
Q ss_pred CcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCC--CeEEEecCCCccc-Cc---cHHHHHHHHHHHHHhhCCCC
Q 018555 281 TPCQVIFSMADEYVPEYVDKKALVERLCRAMGG--AEKVEIEHGIHSL-SN---RVKEAVQAIIDFVKREGPKG 348 (354)
Q Consensus 281 ~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~--~~~~~i~~agH~~-~~---~p~~~~~~i~~Fl~~~~~~~ 348 (354)
.-.+-|-||+|.+-..- +-+.+..+...+|. .+...-+++||+- .+ -.+++.-.|++|+.+..+.+
T Consensus 340 ~aL~tvEGEnDDIsgvG--QTkAA~~LC~nIpe~mk~hy~qp~vGHYGVFnGsrfr~eIvPri~dFI~~~d~~~ 411 (415)
T COG4553 340 VALFTVEGENDDISGVG--QTKAAHDLCSNIPEDMKQHYMQPDVGHYGVFNGSRFREEIVPRIRDFIRRYDRSN 411 (415)
T ss_pred eeEEEeecccccccccc--hhHHHHHHHhcChHHHHHHhcCCCCCccceeccchHHHHHHHHHHHHHHHhCccc
Confidence 36788999999876443 22355566666665 3456789999997 32 35788999999999876543
No 246
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=70.76 E-value=1.1e+02 Score=30.17 Aligned_cols=106 Identities=19% Similarity=0.145 Sum_probs=57.9
Q ss_pred eeEEEecCC-CCcEEEEECCCCCCCCccccHHH--HHHHHhhCCc-EEEEEcccccCCCCCCCCcc--CcHHHHHHHHHH
Q 018555 84 VQVAFKTGD-YQQQVIFIGGLTDGFFATEYLEP--LAIALDKERW-SLVQFLMTSSYTGYGTSSLQ--QDAMEIDQLISY 157 (354)
Q Consensus 84 ~~~~~~~~~-~~p~vIliHG~~~~~~~~~~~~~--la~~La~~g~-~Via~D~R~~~~G~G~S~~~--~~~~dl~~~i~~ 157 (354)
+.++|.+++ ++|..|..-|+-. .+-++. +.+.| |. -++.-|.| .--|.-... +.-+.|.++|+.
T Consensus 278 i~yYFnPGD~KPPL~VYFSGyR~----aEGFEgy~MMk~L---g~PfLL~~DpR---leGGaFYlGs~eyE~~I~~~I~~ 347 (511)
T TIGR03712 278 FIYYFNPGDFKPPLNVYFSGYRP----AEGFEGYFMMKRL---GAPFLLIGDPR---LEGGAFYLGSDEYEQGIINVIQE 347 (511)
T ss_pred eEEecCCcCCCCCeEEeeccCcc----cCcchhHHHHHhc---CCCeEEeeccc---cccceeeeCcHHHHHHHHHHHHH
Confidence 445556665 4577788888763 222222 34444 33 34445776 222221111 112334444444
Q ss_pred HHhhCC--CCcEEEEEEChhHHHHHHHHHhcccccccccEEEEecccCc
Q 018555 158 LINKDN--SEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSD 204 (354)
Q Consensus 158 l~~~~~--~~~~~LvGhS~GG~~a~~~a~~p~~~~~~v~~lIl~~p~~~ 204 (354)
-.+.++ ...++|-|-|||..-|+.|++.- .-.++|+--|...
T Consensus 348 ~L~~LgF~~~qLILSGlSMGTfgAlYYga~l-----~P~AIiVgKPL~N 391 (511)
T TIGR03712 348 KLDYLGFDHDQLILSGLSMGTFGALYYGAKL-----SPHAIIVGKPLVN 391 (511)
T ss_pred HHHHhCCCHHHeeeccccccchhhhhhcccC-----CCceEEEcCcccc
Confidence 444344 45799999999999999999881 1235555445443
No 247
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=70.20 E-value=10 Score=37.03 Aligned_cols=43 Identities=16% Similarity=0.210 Sum_probs=31.3
Q ss_pred hCCCCcEEEEEEChhHHHHHHHHHh--cccccccccEEEEecccC
Q 018555 161 KDNSEGVVLLGHSTGCQDIVHYMRA--NAACSRAVRAAIFQAPVS 203 (354)
Q Consensus 161 ~~~~~~~~LvGhS~GG~~a~~~a~~--p~~~~~~v~~lIl~~p~~ 203 (354)
..|..|+.|||+|+|+.+......+ .......|.-+||.+...
T Consensus 443 ~qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv 487 (633)
T KOG2385|consen 443 SQGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPV 487 (633)
T ss_pred ccCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCc
Confidence 4678899999999999999866553 122233688888886543
No 248
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=68.90 E-value=13 Score=28.73 Aligned_cols=22 Identities=9% Similarity=0.253 Sum_probs=12.7
Q ss_pred CeeEEEec----CCCCcEEEEECCCC
Q 018555 83 PVQVAFKT----GDYQQQVIFIGGLT 104 (354)
Q Consensus 83 ~~~~~~~~----~~~~p~vIliHG~~ 104 (354)
++.++|.. +....+|||+|||+
T Consensus 77 g~~iHFih~rs~~~~aiPLll~HGWP 102 (112)
T PF06441_consen 77 GLDIHFIHVRSKRPNAIPLLLLHGWP 102 (112)
T ss_dssp TEEEEEEEE--S-TT-EEEEEE--SS
T ss_pred eEEEEEEEeeCCCCCCeEEEEECCCC
Confidence 45555543 34567999999999
No 249
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=64.08 E-value=71 Score=28.89 Aligned_cols=37 Identities=16% Similarity=0.304 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHhhCC-CCcEEEEEEChhHHHHHHHHHh
Q 018555 149 MEIDQLISYLINKDN-SEGVVLLGHSTGCQDIVHYMRA 185 (354)
Q Consensus 149 ~dl~~~i~~l~~~~~-~~~~~LvGhS~GG~~a~~~a~~ 185 (354)
..+.....+|.+.+. ..+++|+|.|-|+.+|-.++..
T Consensus 75 ~~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 75 ARIRDAYRFLSKNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred HHHHHHHHHHHhccCCcceEEEEecCccHHHHHHHHHH
Confidence 456666666655433 4579999999999999888865
No 250
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=60.22 E-value=19 Score=28.53 Aligned_cols=37 Identities=24% Similarity=0.337 Sum_probs=23.8
Q ss_pred CcEEEEECC-CCCC---------CCccccHH-----------HHHHHHhhCCcEEEEE
Q 018555 94 QQQVIFIGG-LTDG---------FFATEYLE-----------PLAIALDKERWSLVQF 130 (354)
Q Consensus 94 ~p~vIliHG-~~~~---------~~~~~~~~-----------~la~~La~~g~~Via~ 130 (354)
-.++||+|| |..+ -.+..||. ..+..|.+.||+|+.+
T Consensus 57 y~~viFvHGCFWh~H~c~~a~vPksnt~fWleKi~kNveRD~r~~~~L~~~GwrvlvV 114 (150)
T COG3727 57 YRCVIFVHGCFWHGHHCYLAKVPKSNTEFWLEKIGKNVERDERDIKRLQQLGWRVLVV 114 (150)
T ss_pred ceEEEEEeeeeccCCccccccCCCcchHHHHHHHhhhhhhhHHHHHHHHHcCCeEEEE
Confidence 468999999 3321 12445563 3456788888888877
No 251
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=59.23 E-value=26 Score=30.30 Aligned_cols=41 Identities=17% Similarity=0.161 Sum_probs=30.0
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcc
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLM 132 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~ 132 (354)
+.++.|.||+--+.......|-+...+.|++.|+.+..+++
T Consensus 30 g~~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l 70 (224)
T COG3340 30 GKRKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHL 70 (224)
T ss_pred CCCceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeec
Confidence 34778999988663222233557778889999999999988
No 252
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=59.10 E-value=83 Score=28.57 Aligned_cols=110 Identities=11% Similarity=0.074 Sum_probs=57.8
Q ss_pred CcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEccc--ccCCCCCCCCccCcHHHHHHHHHHHHh---hC---CCC
Q 018555 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMT--SSYTGYGTSSLQQDAMEIDQLISYLIN---KD---NSE 165 (354)
Q Consensus 94 ~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R--~~~~G~G~S~~~~~~~dl~~~i~~l~~---~~---~~~ 165 (354)
+.+||+.--.|.|.-+...-.. .+++-.-...+++..|. .||..| ..+.+...+.-.++++.+.+ .+ ...
T Consensus 32 R~~lvV~~pTGtGWVdp~a~~a-~E~l~~GD~A~va~QYSylPSw~sf-l~dr~~a~~a~~aL~~aV~~~~~~lP~~~RP 109 (289)
T PF10081_consen 32 RKVLVVATPTGTGWVDPWAVDA-LEYLYGGDVAIVAMQYSYLPSWLSF-LVDRDAAREAARALFEAVYARWSTLPEDRRP 109 (289)
T ss_pred cceEEEEcCCCCCccCHHHHhH-HHHHhCCCeEEEEeccccccchHHH-hcccchHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 4455555555544444433333 45555457788888772 111111 00112222333334444333 12 245
Q ss_pred cEEEEEEChhHHHHHHHHHhcccccccccEEEEecccCch
Q 018555 166 GVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVSDR 205 (354)
Q Consensus 166 ~~~LvGhS~GG~~a~~~a~~p~~~~~~v~~lIl~~p~~~~ 205 (354)
+++|.|.|+|++-+...-...+.-..++++.++.+|....
T Consensus 110 kL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~~s 149 (289)
T PF10081_consen 110 KLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPFFS 149 (289)
T ss_pred eEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCCCC
Confidence 7999999999987755443211122379999999886543
No 253
>COG0400 Predicted esterase [General function prediction only]
Probab=58.51 E-value=27 Score=30.20 Aligned_cols=61 Identities=18% Similarity=0.111 Sum_probs=43.0
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHh
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLIN 160 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~ 160 (354)
-+..+|+++||--|-......-..+.+.|.+.|..|...++- .||.- ..++++++.+|+.+
T Consensus 144 ~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~---~GH~i-----~~e~~~~~~~wl~~ 204 (207)
T COG0400 144 LAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE---GGHEI-----PPEELEAARSWLAN 204 (207)
T ss_pred cCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec---CCCcC-----CHHHHHHHHHHHHh
Confidence 346799999998876555555778899999899999999882 23332 23556666666653
No 254
>PRK11460 putative hydrolase; Provisional
Probab=57.51 E-value=29 Score=30.38 Aligned_cols=62 Identities=11% Similarity=-0.014 Sum_probs=39.1
Q ss_pred CCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhh
Q 018555 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINK 161 (354)
Q Consensus 93 ~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~ 161 (354)
.+++|+++||--|.......-..+.+.|.+.|..+...-+.+ .||+-+ .+++.++.++|.+.
T Consensus 147 ~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~--~gH~i~-----~~~~~~~~~~l~~~ 208 (232)
T PRK11460 147 TATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVED--LGHAID-----PRLMQFALDRLRYT 208 (232)
T ss_pred CCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECC--CCCCCC-----HHHHHHHHHHHHHH
Confidence 357899999988766555566778888887777655444410 245443 35556666666543
No 255
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=55.79 E-value=31 Score=29.63 Aligned_cols=61 Identities=10% Similarity=-0.007 Sum_probs=38.6
Q ss_pred HHHHHhhCCc-EEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhhCCCCcEEEEEECh----hHHHHHHHHHh
Q 018555 116 LAIALDKERW-SLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLGHST----GCQDIVHYMRA 185 (354)
Q Consensus 116 la~~La~~g~-~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~~~~~~~~LvGhS~----GG~~a~~~a~~ 185 (354)
.++.+...|. +|+..|. .++... ..+.+..++..+.++.+ ..++|+|||. |..++-++|.+
T Consensus 68 ~~~~l~~~G~d~V~~~~~----~~~~~~----~~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAar 133 (202)
T cd01714 68 ALREALAMGADRAILVSD----RAFAGA----DTLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAEL 133 (202)
T ss_pred HHHHHHHcCCCEEEEEec----ccccCC----ChHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHH
Confidence 3344444565 7777776 444333 23444555555444444 5799999999 88899999887
No 256
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=55.24 E-value=1.5e+02 Score=28.49 Aligned_cols=32 Identities=25% Similarity=0.293 Sum_probs=25.2
Q ss_pred CCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEE
Q 018555 163 NSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIF 198 (354)
Q Consensus 163 ~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl 198 (354)
.+.-++=+|-|.|..++...+.. |- -+-+++.
T Consensus 93 ~i~Gvi~~GGs~GT~lat~aMr~LPi----G~PKlmV 125 (403)
T PF06792_consen 93 KIDGVIGIGGSGGTALATAAMRALPI----GFPKLMV 125 (403)
T ss_pred CccEEEEecCCccHHHHHHHHHhCCC----CCCeEEE
Confidence 35678999999999999998887 65 5656654
No 257
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=54.42 E-value=26 Score=28.78 Aligned_cols=38 Identities=18% Similarity=0.098 Sum_probs=27.0
Q ss_pred CcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcc
Q 018555 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLM 132 (354)
Q Consensus 94 ~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~ 132 (354)
++.||++-|+.+. +-+..-..+.+.|.+.|+.|+.+|-
T Consensus 1 ~g~vIwltGlsGs-GKtTlA~~L~~~L~~~g~~~~~LDg 38 (156)
T PF01583_consen 1 KGFVIWLTGLSGS-GKTTLARALERRLFARGIKVYLLDG 38 (156)
T ss_dssp S-EEEEEESSTTS-SHHHHHHHHHHHHHHTTS-EEEEEH
T ss_pred CCEEEEEECCCCC-CHHHHHHHHHHHHHHcCCcEEEecC
Confidence 3678999998843 3344456777888888999999985
No 258
>PRK02399 hypothetical protein; Provisional
Probab=51.82 E-value=2.1e+02 Score=27.57 Aligned_cols=34 Identities=29% Similarity=0.340 Sum_probs=26.1
Q ss_pred hCCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEE
Q 018555 161 KDNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIF 198 (354)
Q Consensus 161 ~~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl 198 (354)
+..+.-++-+|-|+|..++...+.. |- -+-+++.
T Consensus 93 ~g~i~gviglGGs~GT~lat~aMr~LPi----G~PKlmV 127 (406)
T PRK02399 93 RGDVAGVIGLGGSGGTALATPAMRALPI----GVPKLMV 127 (406)
T ss_pred cCCccEEEEecCcchHHHHHHHHHhCCC----CCCeEEE
Confidence 3446778999999999999988877 65 5555654
No 259
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=51.06 E-value=85 Score=27.27 Aligned_cols=61 Identities=21% Similarity=0.308 Sum_probs=38.2
Q ss_pred CcEEEEECCCCCCCCccccHHHHHHHHhhCCc-EEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhhCCCCcEEEE
Q 018555 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERW-SLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLL 170 (354)
Q Consensus 94 ~p~vIliHG~~~~~~~~~~~~~la~~La~~g~-~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~~~~~~~~Lv 170 (354)
..+|++.||... ....++..|-..|.+.|| .|+.... -||. ++..++++|++ -+.+++.|+
T Consensus 138 e~~vlmgHGt~h--~s~~~YacLd~~~~~~~f~~v~v~~v----e~yP---------~~d~vi~~l~~-~~~~~v~L~ 199 (265)
T COG4822 138 EILVLMGHGTDH--HSNAAYACLDHVLDEYGFDNVFVAAV----EGYP---------LVDTVIEYLRK-NGIKEVHLI 199 (265)
T ss_pred eEEEEEecCCCc--cHHHHHHHHHHHHHhcCCCceEEEEe----cCCC---------cHHHHHHHHHH-cCCceEEEe
Confidence 457888888662 244456777777777888 6666655 3332 47778888875 234555443
No 260
>PRK12467 peptide synthase; Provisional
Probab=49.43 E-value=68 Score=40.56 Aligned_cols=85 Identities=19% Similarity=0.130 Sum_probs=52.5
Q ss_pred CcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEccccc-CCCCCCCCccCcHHHHHHHHHHHHhhCCCCcEEEEEE
Q 018555 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSS-YTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLGH 172 (354)
Q Consensus 94 ~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~-~~G~G~S~~~~~~~dl~~~i~~l~~~~~~~~~~LvGh 172 (354)
.+.|++.|... .....+..+...|.. +..|+.+..++. ..|+-..+.+...... ++++.......+..+.|+
T Consensus 3692 ~~~l~~~h~~~---r~~~~~~~l~~~l~~-~~~~~~l~~~~~~~d~~~~~~~~~~~~~y---~~~~~~~~~~~p~~l~g~ 3764 (3956)
T PRK12467 3692 FPALFCRHEGL---GTVFDYEPLAVILEG-DRHVLGLTCRHLLDDGWQDTSLQAMAVQY---ADYILWQQAKGPYGLLGW 3764 (3956)
T ss_pred ccceeeechhh---cchhhhHHHHHHhCC-CCcEEEEeccccccccCCccchHHHHHHH---HHHHHHhccCCCeeeeee
Confidence 35688999876 444456778888875 778888876311 0122111222222333 344433334567999999
Q ss_pred ChhHHHHHHHHHh
Q 018555 173 STGCQDIVHYMRA 185 (354)
Q Consensus 173 S~GG~~a~~~a~~ 185 (354)
|+||.++.+++..
T Consensus 3765 s~g~~~a~~~~~~ 3777 (3956)
T PRK12467 3765 SLGGTLARLVAEL 3777 (3956)
T ss_pred ecchHHHHHHHHH
Confidence 9999999888865
No 261
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=49.15 E-value=21 Score=32.15 Aligned_cols=24 Identities=21% Similarity=0.099 Sum_probs=20.0
Q ss_pred CC-CCcEEEEEEChhHHHHHHHHHh
Q 018555 162 DN-SEGVVLLGHSTGCQDIVHYMRA 185 (354)
Q Consensus 162 ~~-~~~~~LvGhS~GG~~a~~~a~~ 185 (354)
.+ +.+-.++|||+|=+.|+..+..
T Consensus 79 ~g~i~p~~v~GhS~GE~aAa~~aG~ 103 (290)
T TIGR00128 79 QGGLKPDFAAGHSLGEYSALVAAGA 103 (290)
T ss_pred cCCCCCCEEeecCHHHHHHHHHhCC
Confidence 44 8899999999999988877753
No 262
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=48.22 E-value=76 Score=28.91 Aligned_cols=60 Identities=10% Similarity=0.038 Sum_probs=34.6
Q ss_pred cHHHHHHHHhhCCcE--EEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhhCCCCcEEEEEEChhHHHH
Q 018555 112 YLEPLAIALDKERWS--LVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLGHSTGCQDI 179 (354)
Q Consensus 112 ~~~~la~~La~~g~~--Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~~~~~~~~LvGhS~GG~~a 179 (354)
+++...+.+.+.|.. =|.+|.. .|||.+. .+...+..-++.|.. ....+|+|+|-=.++.
T Consensus 164 ~l~~~i~~a~~~GI~~~~IilDPG---iGF~k~~--~~n~~ll~~l~~l~~---lg~Pilvg~SRKsfig 225 (282)
T PRK11613 164 YFIEQIARCEAAGIAKEKLLLDPG---FGFGKNL--SHNYQLLARLAEFHH---FNLPLLVGMSRKSMIG 225 (282)
T ss_pred HHHHHHHHHHHcCCChhhEEEeCC---CCcCCCH--HHHHHHHHHHHHHHh---CCCCEEEEecccHHHH
Confidence 455556666667886 7788872 3555432 222233333444432 4568999999554443
No 263
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=48.09 E-value=16 Score=33.79 Aligned_cols=25 Identities=16% Similarity=0.074 Sum_probs=20.8
Q ss_pred hhCCCCcEEEEEEChhHHHHHHHHH
Q 018555 160 NKDNSEGVVLLGHSTGCQDIVHYMR 184 (354)
Q Consensus 160 ~~~~~~~~~LvGhS~GG~~a~~~a~ 184 (354)
+..|+++-+++|||+|=+.|+..+.
T Consensus 79 ~~~Gi~P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 79 RSWGIKPDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp HHTTHCESEEEESTTHHHHHHHHTT
T ss_pred cccccccceeeccchhhHHHHHHCC
Confidence 4568899999999999988876654
No 264
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=46.64 E-value=30 Score=31.39 Aligned_cols=25 Identities=16% Similarity=0.048 Sum_probs=20.9
Q ss_pred hhCCCCcEEEEEEChhHHHHHHHHH
Q 018555 160 NKDNSEGVVLLGHSTGCQDIVHYMR 184 (354)
Q Consensus 160 ~~~~~~~~~LvGhS~GG~~a~~~a~ 184 (354)
+..|+++-.++|||+|-+.|+.++.
T Consensus 77 ~~~Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 77 RSWGVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHcCCcccEEEecCHHHHHHHHHhC
Confidence 3567889999999999999987764
No 265
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=46.59 E-value=31 Score=31.38 Aligned_cols=25 Identities=12% Similarity=-0.073 Sum_probs=20.6
Q ss_pred hCCCCcEEEEEEChhHHHHHHHHHh
Q 018555 161 KDNSEGVVLLGHSTGCQDIVHYMRA 185 (354)
Q Consensus 161 ~~~~~~~~LvGhS~GG~~a~~~a~~ 185 (354)
..+.++..++|||+|=+.|+.++..
T Consensus 72 ~~g~~P~~v~GhS~GE~aAa~~aG~ 96 (295)
T TIGR03131 72 ALLPRPSAVAGYSVGEYAAAVVAGV 96 (295)
T ss_pred hcCCCCcEEeecCHHHHHHHHHhCC
Confidence 4577899999999999988877643
No 266
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=45.87 E-value=25 Score=33.66 Aligned_cols=97 Identities=18% Similarity=0.129 Sum_probs=69.9
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCC----------ccCcHHHHHHHHHHHHhh
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSS----------LQQDAMEIDQLISYLINK 161 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~----------~~~~~~dl~~~i~~l~~~ 161 (354)
-..|+|+.--|++... ......+.+.|. -+-+.+.+| =|+.|. ..+.+.|...+++.|+..
T Consensus 61 ~drPtV~~T~GY~~~~--~p~r~Ept~Lld---~NQl~vEhR----fF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~i 131 (448)
T PF05576_consen 61 FDRPTVLYTEGYNVST--SPRRSEPTQLLD---GNQLSVEHR----FFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPI 131 (448)
T ss_pred CCCCeEEEecCccccc--CccccchhHhhc---cceEEEEEe----eccCCCCCCCCcccccHhHhhHHHHHHHHHHHhh
Confidence 4579999999988422 223345566664 366778884 666664 223468899999999887
Q ss_pred CCCCcEEEEEEChhHHHHHHHHHh-cccccccccEEEE-eccc
Q 018555 162 DNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRAAIF-QAPV 202 (354)
Q Consensus 162 ~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~lIl-~~p~ 202 (354)
++ ++.+=-|-|-||+.++.+=.- |+ .|++.|- ++|.
T Consensus 132 Y~-~kWISTG~SKGGmTa~y~rrFyP~----DVD~tVaYVAP~ 169 (448)
T PF05576_consen 132 YP-GKWISTGGSKGGMTAVYYRRFYPD----DVDGTVAYVAPN 169 (448)
T ss_pred cc-CCceecCcCCCceeEEEEeeeCCC----CCCeeeeeeccc
Confidence 74 589999999999999877655 88 8998886 4553
No 267
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=45.51 E-value=53 Score=30.29 Aligned_cols=64 Identities=19% Similarity=0.289 Sum_probs=41.4
Q ss_pred CcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCC------C--CCc----c---CcHHHHHHHHHHH
Q 018555 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYG------T--SSL----Q---QDAMEIDQLISYL 158 (354)
Q Consensus 94 ~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G------~--S~~----~---~~~~dl~~~i~~l 158 (354)
..-.|||-| +++.+-..+|..|.++||+|++-=+ ..-| . |+. . ...+++.++.+++
T Consensus 28 ~~k~VlITG-----CDSGfG~~LA~~L~~~Gf~V~Agcl----~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V 98 (322)
T KOG1610|consen 28 SDKAVLITG-----CDSGFGRLLAKKLDKKGFRVFAGCL----TEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWV 98 (322)
T ss_pred CCcEEEEec-----CCcHHHHHHHHHHHhcCCEEEEEee----cCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHH
Confidence 345778877 5666667799999999999999754 2222 1 211 1 1246777788887
Q ss_pred HhhCCCCc
Q 018555 159 INKDNSEG 166 (354)
Q Consensus 159 ~~~~~~~~ 166 (354)
++.++...
T Consensus 99 ~~~l~~~g 106 (322)
T KOG1610|consen 99 KKHLGEDG 106 (322)
T ss_pred HHhccccc
Confidence 77554433
No 268
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=44.18 E-value=19 Score=30.45 Aligned_cols=36 Identities=11% Similarity=0.206 Sum_probs=25.2
Q ss_pred EEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEc
Q 018555 96 QVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFL 131 (354)
Q Consensus 96 ~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D 131 (354)
.||++|-......+......++..|.++||+++.++
T Consensus 153 ~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 153 DIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 488888311111345567889999999999999875
No 269
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=44.08 E-value=27 Score=34.86 Aligned_cols=26 Identities=15% Similarity=0.080 Sum_probs=22.4
Q ss_pred hhCCCCcEEEEEEChhHHHHHHHHHh
Q 018555 160 NKDNSEGVVLLGHSTGCQDIVHYMRA 185 (354)
Q Consensus 160 ~~~~~~~~~LvGhS~GG~~a~~~a~~ 185 (354)
+..|+++-.++|||+|=+.|+..|.-
T Consensus 260 ~~~GI~Pdav~GHSlGE~aAa~aAGv 285 (538)
T TIGR02816 260 DEFAIKPDFALGYSKGEASMWASLGV 285 (538)
T ss_pred HhcCCCCCEEeecCHHHHHHHHHhCC
Confidence 46789999999999999999888754
No 270
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=42.73 E-value=1.2e+02 Score=28.74 Aligned_cols=89 Identities=18% Similarity=0.182 Sum_probs=59.1
Q ss_pred CcEEEEECCCCCCC----CccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhhCCCCcEEE
Q 018555 94 QQQVIFIGGLTDGF----FATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVL 169 (354)
Q Consensus 94 ~p~vIliHG~~~~~----~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~~~~~~~~L 169 (354)
...||++||--.++ .+...|..+++.+.++++ +-.+|+ .|.|||.- .++++.-+..++... +-++
T Consensus 171 ~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~l-ip~~D~--AYQGF~~G-leeDa~~lR~~a~~~-------~~~l 239 (396)
T COG1448 171 EGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGL-IPFFDI--AYQGFADG-LEEDAYALRLFAEVG-------PELL 239 (396)
T ss_pred CCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCC-eeeeeh--hhhhhccc-hHHHHHHHHHHHHhC-------CcEE
Confidence 45688888844322 245569999999998664 455776 45788875 555555555444432 2388
Q ss_pred EEEChhHHHHHHHHHhcccccccccEEEEecc
Q 018555 170 LGHSTGCQDIVHYMRANAACSRAVRAAIFQAP 201 (354)
Q Consensus 170 vGhS~GG~~a~~~a~~p~~~~~~v~~lIl~~p 201 (354)
|..|+-=.+.+ ..+ ||.++++++.
T Consensus 240 va~S~SKnfgL----YgE----RVGa~~vva~ 263 (396)
T COG1448 240 VASSFSKNFGL----YGE----RVGALSVVAE 263 (396)
T ss_pred EEehhhhhhhh----hhh----ccceeEEEeC
Confidence 99998777664 244 8888888764
No 271
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=42.70 E-value=43 Score=32.05 Aligned_cols=47 Identities=19% Similarity=0.336 Sum_probs=39.6
Q ss_pred CCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccC
Q 018555 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ 146 (354)
Q Consensus 93 ~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~ 146 (354)
..+++|-+--|| -+..+-..+.+.|.++||.|+.|.- .|.|--..++
T Consensus 183 ~~kp~I~iTmfG---vTTp~V~~~~~~Le~~G~Ev~VFHA----tG~GG~aME~ 229 (403)
T PF06792_consen 183 EDKPLIGITMFG---VTTPCVDAIRERLEEEGYEVLVFHA----TGTGGRAMER 229 (403)
T ss_pred CCCcEEEEECCC---CcHHHHHHHHHHHHhcCCeEEEEcC----CCCchHHHHH
Confidence 556788888899 7888889999999999999999999 8988655443
No 272
>PF06564 YhjQ: YhjQ protein; InterPro: IPR017746 The YhjQ protein is encoded immediately upstream of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae, and in several species is clearly part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm [], based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=42.64 E-value=32 Score=30.51 Aligned_cols=38 Identities=26% Similarity=0.156 Sum_probs=31.7
Q ss_pred EEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEccc
Q 018555 96 QVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMT 133 (354)
Q Consensus 96 ~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R 133 (354)
.+|.|-|.-+|.+.+..-..|+..|++.|.+|+++|+.
T Consensus 2 ~~iai~s~kGGvG~TTltAnLA~aL~~~G~~VlaID~d 39 (243)
T PF06564_consen 2 KVIAIVSPKGGVGKTTLTANLAWALARLGESVLAIDLD 39 (243)
T ss_pred cEEEEecCCCCCCHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 46777777777777777888999999999999999984
No 273
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=42.16 E-value=47 Score=28.58 Aligned_cols=60 Identities=17% Similarity=0.155 Sum_probs=43.4
Q ss_pred CcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHH
Q 018555 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISY 157 (354)
Q Consensus 94 ~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~ 157 (354)
.++|++.||--+..--..+-+...+.|...|.++.---+ +|.+.++.++..+|+..++..
T Consensus 144 ~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y----~g~~h~~~~~e~~~~~~~~~~ 203 (206)
T KOG2112|consen 144 YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPY----PGLGHSTSPQELDDLKSWIKT 203 (206)
T ss_pred cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeec----CCccccccHHHHHHHHHHHHH
Confidence 567999999776544444445667788888888444445 799999888877777776665
No 274
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=41.67 E-value=68 Score=22.91 Aligned_cols=38 Identities=24% Similarity=0.390 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHhh---CCCCcEEEEEEChhHHHHHHHHHh
Q 018555 148 AMEIDQLISYLINK---DNSEGVVLLGHSTGCQDIVHYMRA 185 (354)
Q Consensus 148 ~~dl~~~i~~l~~~---~~~~~~~LvGhS~GG~~a~~~a~~ 185 (354)
.+.+.+.+++++.+ -+.+++.++|-|.|=.+|.+.++.
T Consensus 20 ~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~a 60 (78)
T PF12242_consen 20 ARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAA 60 (78)
T ss_dssp HHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHH
Confidence 45777888888763 345789999999999999877765
No 275
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=40.37 E-value=2.1e+02 Score=24.74 Aligned_cols=51 Identities=20% Similarity=0.227 Sum_probs=32.6
Q ss_pred HHHHHHHHhhCCcEEEEEccccc--------CCCCCC-CCccCc---HHHHHHHHHHHHhhCC
Q 018555 113 LEPLAIALDKERWSLVQFLMTSS--------YTGYGT-SSLQQD---AMEIDQLISYLINKDN 163 (354)
Q Consensus 113 ~~~la~~La~~g~~Via~D~R~~--------~~G~G~-S~~~~~---~~dl~~~i~~l~~~~~ 163 (354)
-+.++..|+++|++|+..|+++. -+|+|. +.+.-+ ..|+...++...+.++
T Consensus 27 GrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g 89 (256)
T KOG1200|consen 27 GRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLG 89 (256)
T ss_pred HHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcC
Confidence 36789999999999999999732 234433 223322 4566665666655554
No 276
>PRK04435 hypothetical protein; Provisional
Probab=40.36 E-value=1.3e+02 Score=24.29 Aligned_cols=76 Identities=16% Similarity=0.147 Sum_probs=48.6
Q ss_pred CCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCc---cCcH-HHHHHHHHHHHhhCCCCcEE
Q 018555 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSL---QQDA-MEIDQLISYLINKDNSEGVV 168 (354)
Q Consensus 93 ~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~---~~~~-~dl~~~i~~l~~~~~~~~~~ 168 (354)
.+.+-|.++... ....+..+.+.+++.|.++..+.+.....|...-+. ..+. .++.++++.|...-+..++-
T Consensus 67 ~r~vtL~i~l~D----r~GlLs~Il~~IA~~~aNIltI~q~i~~~g~a~vs~tVevs~~~~~L~~Li~~L~~i~gV~~V~ 142 (147)
T PRK04435 67 GKIITLSLLLED----RSGTLSKVLNVIAEAGGNILTINQSIPLQGRANVTISIDTSSMEGDIDELLEKLRNLDGVEKVE 142 (147)
T ss_pred CcEEEEEEEEec----CCCHHHHHHHHHHHcCCCeEEEEEEcCCCCEEEEEEEEEeCChHHHHHHHHHHHHcCCCcEEEE
Confidence 344445444422 344578899999999999999987311112111111 1233 48899999998877888899
Q ss_pred EEEE
Q 018555 169 LLGH 172 (354)
Q Consensus 169 LvGh 172 (354)
++|.
T Consensus 143 i~~~ 146 (147)
T PRK04435 143 LIGM 146 (147)
T ss_pred EEec
Confidence 9885
No 277
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=39.93 E-value=40 Score=23.97 Aligned_cols=33 Identities=27% Similarity=0.209 Sum_probs=23.3
Q ss_pred EEECCCCCCCCccccHHHHHHHHhhCCcEEEEEc
Q 018555 98 IFIGGLTDGFFATEYLEPLAIALDKERWSLVQFL 131 (354)
Q Consensus 98 IliHG~~~~~~~~~~~~~la~~La~~g~~Via~D 131 (354)
+++-|.+ |.+.+..-..++..|++.|++|+.+|
T Consensus 2 ~~~~g~~-G~Gktt~~~~l~~~l~~~g~~v~~~~ 34 (99)
T cd01983 2 IVVTGKG-GVGKTTLAANLAAALAKRGKRVLLID 34 (99)
T ss_pred EEEECCC-CCCHHHHHHHHHHHHHHCCCeEEEEC
Confidence 3444444 33455556788999998899999988
No 278
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=39.90 E-value=84 Score=29.18 Aligned_cols=79 Identities=14% Similarity=0.103 Sum_probs=51.9
Q ss_pred cEEEEEcccccCCCCCCCCcc----------CcHHHHHHHHHHHHh---hCCCCcEEEEEEChhHHHHHHHHHh-ccc--
Q 018555 125 WSLVQFLMTSSYTGYGTSSLQ----------QDAMEIDQLISYLIN---KDNSEGVVLLGHSTGCQDIVHYMRA-NAA-- 188 (354)
Q Consensus 125 ~~Via~D~R~~~~G~G~S~~~----------~~~~dl~~~i~~l~~---~~~~~~~~LvGhS~GG~~a~~~a~~-p~~-- 188 (354)
-.++.+|-+ -|-|.|..+ +.+.|+.++++.+-. ++...+++++-.|+||-++..++.. .+.
T Consensus 72 adllfvDnP---VGaGfSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk 148 (414)
T KOG1283|consen 72 ADLLFVDNP---VGAGFSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIK 148 (414)
T ss_pred ccEEEecCC---CcCceeeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHh
Confidence 467778875 566665322 224556666555544 4556799999999999999988875 221
Q ss_pred ---ccccccEEEEecccCchH
Q 018555 189 ---CSRAVRAAIFQAPVSDRE 206 (354)
Q Consensus 189 ---~~~~v~~lIl~~p~~~~~ 206 (354)
-.....+++|-++...++
T Consensus 149 ~G~i~~nf~~VaLGDSWISP~ 169 (414)
T KOG1283|consen 149 RGEIKLNFIGVALGDSWISPE 169 (414)
T ss_pred cCceeecceeEEccCcccChh
Confidence 123567888877766654
No 279
>PRK02399 hypothetical protein; Provisional
Probab=39.44 E-value=53 Score=31.41 Aligned_cols=47 Identities=15% Similarity=0.262 Sum_probs=38.4
Q ss_pred CCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccC
Q 018555 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQ 146 (354)
Q Consensus 93 ~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~ 146 (354)
..+++|-+--|| .+..+-..+.+.|.++||.|+.|.- .|.|--..+.
T Consensus 184 ~~kp~Ig~TmfG---vTtp~v~~~~~~Le~~GyEvlVFHA----TG~GGraME~ 230 (406)
T PRK02399 184 DDKPLIGLTMFG---VTTPCVQAAREELEARGYEVLVFHA----TGTGGRAMEK 230 (406)
T ss_pred CCCceEEEecCC---CcHHHHHHHHHHHHhCCCeEEEEcC----CCCchHHHHH
Confidence 356777777778 7788889999999999999999999 8988765443
No 280
>PRK10279 hypothetical protein; Provisional
Probab=38.43 E-value=44 Score=30.73 Aligned_cols=31 Identities=23% Similarity=0.124 Sum_probs=24.4
Q ss_pred HHHHHHhhCCCCcEEEEEEChhHHHHHHHHHh
Q 018555 154 LISYLINKDNSEGVVLLGHSTGCQDIVHYMRA 185 (354)
Q Consensus 154 ~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~ 185 (354)
+++.|.+ .++..-.++|-|+|+.++..||..
T Consensus 23 VL~aL~E-~gi~~d~i~GtS~GAlvga~yA~g 53 (300)
T PRK10279 23 VINALKK-VGIEIDIVAGCSIGSLVGAAYACD 53 (300)
T ss_pred HHHHHHH-cCCCcCEEEEEcHHHHHHHHHHcC
Confidence 4555544 467778999999999999999965
No 281
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=38.41 E-value=33 Score=30.95 Aligned_cols=33 Identities=12% Similarity=0.219 Sum_probs=26.4
Q ss_pred EEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEc
Q 018555 96 QVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFL 131 (354)
Q Consensus 96 ~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D 131 (354)
.|||+|-.. .+......++..|.++||+++.++
T Consensus 232 ~IILmHd~~---~T~~aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 232 AMVLMHPTA---SSTEGLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred cEEEEcCCc---cHHHHHHHHHHHHHHCCCEEEeHH
Confidence 577888644 466678999999999999998875
No 282
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=37.84 E-value=34 Score=28.47 Aligned_cols=27 Identities=22% Similarity=0.158 Sum_probs=20.6
Q ss_pred CCCccccHHHHHHHHhhCCcEEEEEcc
Q 018555 106 GFFATEYLEPLAIALDKERWSLVQFLM 132 (354)
Q Consensus 106 ~~~~~~~~~~la~~La~~g~~Via~D~ 132 (354)
|.+-+..-..++..|+++|++|+.+|+
T Consensus 9 G~GKTt~a~~la~~la~~g~~VlliD~ 35 (195)
T PF01656_consen 9 GVGKTTIAANLAQALARKGKKVLLIDL 35 (195)
T ss_dssp TSSHHHHHHHHHHHHHHTTS-EEEEEE
T ss_pred CccHHHHHHHHHhcccccccccccccc
Confidence 334455557789999999999999999
No 283
>PRK13230 nitrogenase reductase-like protein; Reviewed
Probab=37.62 E-value=56 Score=29.40 Aligned_cols=35 Identities=17% Similarity=0.135 Sum_probs=25.8
Q ss_pred EEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcc
Q 018555 96 QVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLM 132 (354)
Q Consensus 96 ~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~ 132 (354)
+|.|. |-| |.+-+..-..++..|+++|++|+.+|+
T Consensus 3 ~i~~~-gKG-GVGKTT~a~nLA~~La~~G~rVLliD~ 37 (279)
T PRK13230 3 KFCFY-GKG-GIGKSTTVCNIAAALAESGKKVLVVGC 37 (279)
T ss_pred EEEEE-CCC-CCcHHHHHHHHHHHHHhCCCEEEEEee
Confidence 35555 644 334444457789999999999999998
No 284
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=37.48 E-value=82 Score=25.20 Aligned_cols=53 Identities=13% Similarity=0.137 Sum_probs=32.7
Q ss_pred EEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHH
Q 018555 97 VIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQL 154 (354)
Q Consensus 97 vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~ 154 (354)
+|.+-|.. +.+-+..-+.|++.|.++||+|.++=. .++|+......-.|...+
T Consensus 2 vv~VvG~~-~sGKTTl~~~Li~~l~~~g~~v~~ik~----~~~g~~~~d~pG~Dt~r~ 54 (140)
T PF03205_consen 2 VVQVVGPK-NSGKTTLIRKLINELKRRGYRVAVIKH----TDHGQFEIDPPGTDTWRF 54 (140)
T ss_dssp EEEEEEST-TSSHHHHHHHHHHHHHHTT--EEEEEE-----STTSTTCSTTCHHHHHH
T ss_pred EEEEECCC-CCCHHHHHHHHHHHHhHcCCceEEEEE----ccCCCcccCCCCcccccc
Confidence 55555654 224555678899999989999996655 577776655444455544
No 285
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=37.48 E-value=3e+02 Score=24.56 Aligned_cols=94 Identities=15% Similarity=0.206 Sum_probs=52.9
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhhCCCCcEEE-E
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVL-L 170 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~~~~~~~~L-v 170 (354)
..+.+|++--|.. .+..-|...++.+.+.|-.=+.+=.|+. .+|.. .....-|+.. +..+++..+. ++++ .
T Consensus 120 ~tgkPVilk~G~~---~t~~e~~~A~e~i~~~Gn~~i~L~eRg~-~~Y~~--~~~n~~dl~a-i~~lk~~~~l-PVivd~ 191 (250)
T PRK13397 120 HIDKPILFKRGLM---ATIEEYLGALSYLQDTGKSNIILCERGV-RGYDV--ETRNMLDIMA-VPIIQQKTDL-PIIVDV 191 (250)
T ss_pred ccCCeEEEeCCCC---CCHHHHHHHHHHHHHcCCCeEEEEcccc-CCCCC--ccccccCHHH-HHHHHHHhCC-CeEECC
Confidence 4578999999966 5777799999999877774344444422 23332 2221334433 2334433332 4444 4
Q ss_pred EEChhH-----HHHHHHHHhcccccccccEEEEe
Q 018555 171 GHSTGC-----QDIVHYMRANAACSRAVRAAIFQ 199 (354)
Q Consensus 171 GhS~GG-----~~a~~~a~~p~~~~~~v~~lIl~ 199 (354)
.||.|- .++....+. -++|+++-
T Consensus 192 SHs~G~r~~v~~~a~AAvA~------GAdGl~IE 219 (250)
T PRK13397 192 SHSTGRRDLLLPAAKIAKAV------GANGIMME 219 (250)
T ss_pred CCCCcccchHHHHHHHHHHh------CCCEEEEE
Confidence 688774 344333333 57788874
No 286
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=36.05 E-value=41 Score=31.09 Aligned_cols=30 Identities=17% Similarity=0.152 Sum_probs=22.4
Q ss_pred HHHHhhC-CCCcEEEEEEChhHHHHHHHHHh
Q 018555 156 SYLINKD-NSEGVVLLGHSTGCQDIVHYMRA 185 (354)
Q Consensus 156 ~~l~~~~-~~~~~~LvGhS~GG~~a~~~a~~ 185 (354)
+.+.++. +.++.++.|||+|=+.|+..+..
T Consensus 75 ~~l~~~~~~~~p~~~aGHSlGEysAl~~ag~ 105 (310)
T COG0331 75 RVLAEQGLGVKPDFVAGHSLGEYSALAAAGV 105 (310)
T ss_pred HHHHHhcCCCCCceeecccHhHHHHHHHccc
Confidence 3334434 67888999999999999877753
No 287
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=35.76 E-value=78 Score=28.98 Aligned_cols=33 Identities=21% Similarity=0.329 Sum_probs=25.8
Q ss_pred cEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcc
Q 018555 95 QQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLM 132 (354)
Q Consensus 95 p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~ 132 (354)
.-+|+|-|-|.|. -+.++..|++.|..++..|.
T Consensus 38 g~~vLITGgg~Gl-----Gr~ialefa~rg~~~vl~Di 70 (300)
T KOG1201|consen 38 GEIVLITGGGSGL-----GRLIALEFAKRGAKLVLWDI 70 (300)
T ss_pred CCEEEEeCCCchH-----HHHHHHHHHHhCCeEEEEec
Confidence 3578888877444 36689999999999999998
No 288
>PRK10343 RNA-binding protein YhbY; Provisional
Probab=35.67 E-value=1.5e+02 Score=22.15 Aligned_cols=63 Identities=14% Similarity=0.318 Sum_probs=42.9
Q ss_pred CcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhhCCCCcEEEEEE
Q 018555 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLGH 172 (354)
Q Consensus 94 ~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~~~~~~~~LvGh 172 (354)
-.++|.|+..| .+......+-+.|.. ..+|-+-. .....+|..++++.+.+..+.+-+-++|+
T Consensus 18 l~Pvv~IGk~G---lt~~vi~ei~~aL~~--hELIKvkv-----------~~~~~~~~~e~~~~i~~~~~ae~Vq~IG~ 80 (97)
T PRK10343 18 LKPVVLLGSNG---LTEGVLAEIEQALEH--HELIKVKI-----------ATEDRETKTLIVEAIVRETGACNVQVIGK 80 (97)
T ss_pred CCCeEEECCCC---CCHHHHHHHHHHHHH--CCcEEEEe-----------cCCChhHHHHHHHHHHHHHCCEEEeeeCc
Confidence 45788998877 667777888888875 55666655 12234566777777777666666777776
No 289
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=35.58 E-value=54 Score=30.28 Aligned_cols=32 Identities=13% Similarity=0.028 Sum_probs=21.9
Q ss_pred HHHHHHhhCCCC----cEEEEEEChhHHHHHHHHHh
Q 018555 154 LISYLINKDNSE----GVVLLGHSTGCQDIVHYMRA 185 (354)
Q Consensus 154 ~i~~l~~~~~~~----~~~LvGhS~GG~~a~~~a~~ 185 (354)
+++.|.++++.. -=.+.|-|+||.+|..++..
T Consensus 17 vL~~le~~~g~~i~~~fD~i~GTStGgiIA~~la~g 52 (312)
T cd07212 17 MLIAIEKALGRPIRELFDWIAGTSTGGILALALLHG 52 (312)
T ss_pred HHHHHHHHhCCCchhhccEEEeeChHHHHHHHHHcC
Confidence 445554433322 23688999999999999975
No 290
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=35.49 E-value=3.3e+02 Score=24.77 Aligned_cols=89 Identities=18% Similarity=0.138 Sum_probs=53.1
Q ss_pred HHhhCCcEEEEEcc--cccCCCCCCCC-ccCcHHHHHHHHHHHHh--hCCCCcEEEEEEChhHHHHHHHHHh-ccccccc
Q 018555 119 ALDKERWSLVQFLM--TSSYTGYGTSS-LQQDAMEIDQLISYLIN--KDNSEGVVLLGHSTGCQDIVHYMRA-NAACSRA 192 (354)
Q Consensus 119 ~La~~g~~Via~D~--R~~~~G~G~S~-~~~~~~dl~~~i~~l~~--~~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~ 192 (354)
.|+..|++|+++.- =++++|||... .....+++.++++.+.+ ..+.-+.++-|.=-....+...+.- ..-+...
T Consensus 23 ~lq~~G~~V~~vpTV~fSnHtgyg~~~g~v~~~e~l~~~l~~l~~~~~~~~~davltGYlgs~~qv~~i~~~v~~vk~~~ 102 (281)
T COG2240 23 PLQRLGLDVWAVPTVQFSNHTGYGKWTGIVMPPEQLADLLNGLEAIDKLGECDAVLTGYLGSAEQVRAIAGIVKAVKEAN 102 (281)
T ss_pred HHHHcCCceeeeceEEecCCCCCCCCCCcCCCHHHHHHHHHHHHhcccccccCEEEEccCCCHHHHHHHHHHHHHHhccC
Confidence 34556999988852 25669999965 44456788888888876 3444567888863332222222211 0011124
Q ss_pred ccEEEEecccCchHh
Q 018555 193 VRAAIFQAPVSDREY 207 (354)
Q Consensus 193 v~~lIl~~p~~~~~~ 207 (354)
-+.+++++|+.....
T Consensus 103 P~~~~l~DPVMGD~g 117 (281)
T COG2240 103 PNALYLCDPVMGDPG 117 (281)
T ss_pred CCeEEEeCCcccCCC
Confidence 567899999876543
No 291
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=35.12 E-value=50 Score=25.68 Aligned_cols=15 Identities=13% Similarity=0.459 Sum_probs=11.5
Q ss_pred HHHHHhhCCcEEEEE
Q 018555 116 LAIALDKERWSLVQF 130 (354)
Q Consensus 116 la~~La~~g~~Via~ 130 (354)
....|.+.||+|+.+
T Consensus 99 ~~~~L~~~Gw~Vlr~ 113 (117)
T TIGR00632 99 VNSRLQELGWRVLRV 113 (117)
T ss_pred HHHHHHHCcCEEEEE
Confidence 345677789999987
No 292
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=35.01 E-value=3.3e+02 Score=24.35 Aligned_cols=91 Identities=11% Similarity=0.133 Sum_probs=51.7
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCc---cCcHHHHHHHHHHHHhhCCCCcEE
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSL---QQDAMEIDQLISYLINKDNSEGVV 168 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~---~~~~~dl~~~i~~l~~~~~~~~~~ 168 (354)
..+.+|++--|.. .+..-|...++.+.+.|-.=+++=.| |.++. +...-|+.. +..+++..+ -++.
T Consensus 130 ~~gkPVilk~G~~---~t~~e~~~Ave~i~~~Gn~~i~l~~r------G~s~y~~~~~~~~dl~~-i~~lk~~~~-~pV~ 198 (260)
T TIGR01361 130 KQGKPVLLKRGMG---NTIEEWLYAAEYILSSGNGNVILCER------GIRTFEKATRNTLDLSA-VPVLKKETH-LPII 198 (260)
T ss_pred cCCCcEEEeCCCC---CCHHHHHHHHHHHHHcCCCcEEEEEC------CCCCCCCCCcCCcCHHH-HHHHHHhhC-CCEE
Confidence 4567899999977 56777888899988777633333332 22222 122233332 333444343 4677
Q ss_pred E-EEEChh-----HHHHHHHHHhcccccccccEEEEe
Q 018555 169 L-LGHSTG-----CQDIVHYMRANAACSRAVRAAIFQ 199 (354)
Q Consensus 169 L-vGhS~G-----G~~a~~~a~~p~~~~~~v~~lIl~ 199 (354)
+ -.||.| -.++....+. -++++|+-
T Consensus 199 ~ds~Hs~G~r~~~~~~~~aAva~------Ga~gl~iE 229 (260)
T TIGR01361 199 VDPSHAAGRRDLVIPLAKAAIAA------GADGLMIE 229 (260)
T ss_pred EcCCCCCCccchHHHHHHHHHHc------CCCEEEEE
Confidence 7 799988 3333332222 46776664
No 293
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=34.54 E-value=54 Score=30.24 Aligned_cols=60 Identities=18% Similarity=0.086 Sum_probs=37.2
Q ss_pred HHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhhCCCCcEEEEEEChhHHHHHHHHHh
Q 018555 113 LEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRA 185 (354)
Q Consensus 113 ~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~ 185 (354)
|+++++.|.... .-++++ |=|. ..+ --.-+++.|.+ .++..-.++|-|+|+.++..|+..
T Consensus 4 ~~rl~r~l~~~~-~gLvL~------GGG~----RG~-ahiGvL~aLee-~gi~~d~v~GtSaGAi~ga~ya~g 63 (306)
T cd07225 4 FSRLARVLTGNS-IALVLG------GGGA----RGC-AHIGVIKALEE-AGIPVDMVGGTSIGAFIGALYAEE 63 (306)
T ss_pred HHHHHHHhcCCC-EEEEEC------ChHH----HHH-HHHHHHHHHHH-cCCCCCEEEEECHHHHHHHHHHcC
Confidence 677888887533 233332 2111 011 12235555554 367777899999999999999976
No 294
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=34.27 E-value=1e+02 Score=25.94 Aligned_cols=55 Identities=9% Similarity=0.039 Sum_probs=29.8
Q ss_pred cHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhhCCCCcEEEEEE
Q 018555 112 YLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLGH 172 (354)
Q Consensus 112 ~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~~~~~~~~LvGh 172 (354)
.-..+++.+++..-.++.+|.- -- .+.....+-+..+++.+++..+..+++|+-+
T Consensus 47 le~~~a~~ia~~~a~~~~ld~~-----~N-~~~~~~~~~~~~fv~~iR~~hP~tPIllv~~ 101 (178)
T PF14606_consen 47 LEPEVADLIAEIDADLIVLDCG-----PN-MSPEEFRERLDGFVKTIREAHPDTPILLVSP 101 (178)
T ss_dssp --HHHHHHHHHS--SEEEEEES-----HH-CCTTTHHHHHHHHHHHHHTT-SSS-EEEEE-
T ss_pred cCHHHHHHHhcCCCCEEEEEee-----cC-CCHHHHHHHHHHHHHHHHHhCCCCCEEEEec
Confidence 3345566666655577777772 11 3344445667777777777666667777654
No 295
>PHA02519 plasmid partition protein SopA; Reviewed
Probab=34.01 E-value=76 Score=30.34 Aligned_cols=41 Identities=15% Similarity=0.046 Sum_probs=29.0
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcc
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLM 132 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~ 132 (354)
+.++.||-+-.+-+|.+-+..-..|+..|+.+||+|+.+|+
T Consensus 103 ~~~~~vIav~n~KGGVGKTTta~nLA~~LA~~G~rVLlIDl 143 (387)
T PHA02519 103 DKNPVVLAVMSHKGGVYKTSSAVHTAQWLALQGHRVLLIEG 143 (387)
T ss_pred CCCceEEEEecCCCCCcHHHHHHHHHHHHHhCCCcEEEEeC
Confidence 34455665555444555555567789999999999999994
No 296
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=33.92 E-value=94 Score=27.40 Aligned_cols=40 Identities=15% Similarity=0.021 Sum_probs=27.3
Q ss_pred CCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcc
Q 018555 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLM 132 (354)
Q Consensus 93 ~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~ 132 (354)
.+|.|+||+=-........|.+..-+.|.+.|+.|..++.
T Consensus 30 ~~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~ 69 (233)
T PRK05282 30 GRRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHR 69 (233)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEecc
Confidence 3677999987552211233456667778888999998877
No 297
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=33.56 E-value=1.3e+02 Score=25.00 Aligned_cols=54 Identities=17% Similarity=0.139 Sum_probs=39.1
Q ss_pred HHhhCCcEEEEEcccccCCCCCCC-CccCcHHHHHHHHHHHHhhCCCCcEEEEEEChhH
Q 018555 119 ALDKERWSLVQFLMTSSYTGYGTS-SLQQDAMEIDQLISYLINKDNSEGVVLLGHSTGC 176 (354)
Q Consensus 119 ~La~~g~~Via~D~R~~~~G~G~S-~~~~~~~dl~~~i~~l~~~~~~~~~~LvGhS~GG 176 (354)
.|.+.|++.+.+|. ...=.. .......++.+.++.+++..+.+++.||-.|.|.
T Consensus 35 ~Lk~~Gik~li~Dk----DNTL~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs 89 (168)
T PF09419_consen 35 HLKKKGIKALIFDK----DNTLTPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGS 89 (168)
T ss_pred hhhhcCceEEEEcC----CCCCCCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCc
Confidence 37778999999999 332211 1223346788888888887777789999999873
No 298
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=33.41 E-value=1.2e+02 Score=22.97 Aligned_cols=78 Identities=17% Similarity=0.131 Sum_probs=47.5
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhhCCCCcEEEEE
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLG 171 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~~~~~~~~LvG 171 (354)
...|+|||.--+- ..+. ....+...+. -.+.|+-+|. ..+| .+++..+..+........++|-|
T Consensus 12 ~~~~VVifSKs~C--~~c~-~~k~ll~~~~-v~~~vvELD~----~~~g--------~eiq~~l~~~tg~~tvP~vFI~G 75 (104)
T KOG1752|consen 12 SENPVVIFSKSSC--PYCH-RAKELLSDLG-VNPKVVELDE----DEDG--------SEIQKALKKLTGQRTVPNVFIGG 75 (104)
T ss_pred hcCCEEEEECCcC--chHH-HHHHHHHhCC-CCCEEEEccC----CCCc--------HHHHHHHHHhcCCCCCCEEEECC
Confidence 3467888886322 1111 1333444333 3578888887 3333 26777676665444567889999
Q ss_pred EChhHHHHHHHHHh
Q 018555 172 HSTGCQDIVHYMRA 185 (354)
Q Consensus 172 hS~GG~~a~~~a~~ 185 (354)
...||.-=+.-...
T Consensus 76 k~iGG~~dl~~lh~ 89 (104)
T KOG1752|consen 76 KFIGGASDLMALHK 89 (104)
T ss_pred EEEcCHHHHHHHHH
Confidence 99999876665544
No 299
>PF03283 PAE: Pectinacetylesterase
Probab=33.24 E-value=62 Score=30.61 Aligned_cols=38 Identities=16% Similarity=0.151 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHhh-CC-CCcEEEEEEChhHHHHHHHHHh
Q 018555 148 AMEIDQLISYLINK-DN-SEGVVLLGHSTGCQDIVHYMRA 185 (354)
Q Consensus 148 ~~dl~~~i~~l~~~-~~-~~~~~LvGhS~GG~~a~~~a~~ 185 (354)
..-+.+++++|... ++ .++++|-|.|.||.-++..+..
T Consensus 137 ~~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d~ 176 (361)
T PF03283_consen 137 YRILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHADY 176 (361)
T ss_pred HHHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHHHH
Confidence 45688888988875 33 5789999999999988776643
No 300
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=32.89 E-value=3.2e+02 Score=26.21 Aligned_cols=89 Identities=7% Similarity=0.073 Sum_probs=45.6
Q ss_pred cEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCC--ccCcHHHHHHHHHHHH-h--hCCCCcEEE
Q 018555 95 QQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSS--LQQDAMEIDQLISYLI-N--KDNSEGVVL 169 (354)
Q Consensus 95 p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~--~~~~~~dl~~~i~~l~-~--~~~~~~~~L 169 (354)
.+||++.-+................|.+.|+.|+-+... +..||... .....+++...+.... . .+..+++.+
T Consensus 113 ~plviaPamn~~m~~~p~~~~Nl~~L~~~G~~vv~P~~g--~~ac~~~g~g~~~~~~~i~~~v~~~~~~~~~~~~~~vli 190 (390)
T TIGR00521 113 APIILAPAMNENMYNNPAVQENIKRLKDDGYIFIEPDSG--LLACGDEGKGRLAEPETIVKAAEREFSPKEDLEGKRVLI 190 (390)
T ss_pred CCEEEEeCCChhhcCCHHHHHHHHHHHHCCcEEECCCCc--ccccccccCCCCCCHHHHHHHHHHHHhhccccCCceEEE
Confidence 456666554322233344466677888889888877641 11223322 2334455544333322 1 233355666
Q ss_pred EEE------------------ChhHHHHHHHHHh
Q 018555 170 LGH------------------STGCQDIVHYMRA 185 (354)
Q Consensus 170 vGh------------------S~GG~~a~~~a~~ 185 (354)
-|- .||..+|..++.+
T Consensus 191 t~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~ 224 (390)
T TIGR00521 191 TAGPTREPIDPVRFISNLSSGKMGLALAEAAYKR 224 (390)
T ss_pred ecCCccCCCCceeeecCCCcchHHHHHHHHHHHC
Confidence 555 3666677666655
No 301
>cd03409 Chelatase_Class_II Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings. This family includes protoporphyrin IX ferrochelatase (HemH), sirohydrochlorin ferrochelatase (SirB) and the cobaltochelatases, CbiK and CbiX. HemH and SirB are involved in heme and siroheme biosynthesis, respectively, while the cobaltochelatases are associated with cobalamin biosynthesis. Excluded from this family are the ATP-dependent heterotrimeric chelatases (class I) and the multifunctional homodimeric enzymes with dehydrogenase and chelatase activities (class III).
Probab=32.78 E-value=1.2e+02 Score=22.09 Aligned_cols=27 Identities=15% Similarity=-0.045 Sum_probs=14.4
Q ss_pred EEEEECCCCCCCCccccHHHHHHHHhh
Q 018555 96 QVIFIGGLTDGFFATEYLEPLAIALDK 122 (354)
Q Consensus 96 ~vIliHG~~~~~~~~~~~~~la~~La~ 122 (354)
.|++-||.............+++.|.+
T Consensus 2 lllv~HGs~~~s~~~~~~~~~~~~l~~ 28 (101)
T cd03409 2 LLVVGHGSPYKDPYKKDIEAQAHNLAE 28 (101)
T ss_pred EEEEECCCCCCccHHHHHHHHHHHHHH
Confidence 466778866220112235666667665
No 302
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=32.73 E-value=2.4e+02 Score=26.13 Aligned_cols=90 Identities=17% Similarity=0.164 Sum_probs=48.6
Q ss_pred EEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCC--c-------cCcHHHHHHHHHHHHhhCCCC-
Q 018555 96 QVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSS--L-------QQDAMEIDQLISYLINKDNSE- 165 (354)
Q Consensus 96 ~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~--~-------~~~~~dl~~~i~~l~~~~~~~- 165 (354)
.|+..+|.| +- =.+.+..|.++||.|+.+|. .--|... . ..++.|-+.+-+.+.+ ..++
T Consensus 2 ~iLVtGGAG---YI---GSHtv~~Ll~~G~~vvV~DN----L~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~-~~ida 70 (329)
T COG1087 2 KVLVTGGAG---YI---GSHTVRQLLKTGHEVVVLDN----LSNGHKIALLKLQFKFYEGDLLDRALLTAVFEE-NKIDA 70 (329)
T ss_pred eEEEecCcc---hh---HHHHHHHHHHCCCeEEEEec----CCCCCHHHhhhccCceEEeccccHHHHHHHHHh-cCCCE
Confidence 466666655 22 24466667778999999998 4334321 1 1123343333333333 2222
Q ss_pred -----cEEEEEECh-----------hHHHHHHHHHhcccccccccEEEEec
Q 018555 166 -----GVVLLGHST-----------GCQDIVHYMRANAACSRAVRAAIFQA 200 (354)
Q Consensus 166 -----~~~LvGhS~-----------GG~~a~~~a~~p~~~~~~v~~lIl~~ 200 (354)
-...||.|+ +|.+.+.-+.+.. .|+.+|+-+
T Consensus 71 ViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~----gv~~~vFSS 117 (329)
T COG1087 71 VVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQT----GVKKFIFSS 117 (329)
T ss_pred EEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHh----CCCEEEEec
Confidence 234567775 4555544444423 689999865
No 303
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=32.31 E-value=63 Score=29.17 Aligned_cols=31 Identities=19% Similarity=0.066 Sum_probs=24.3
Q ss_pred HHHHHHhhCCCCcEEEEEEChhHHHHHHHHHh
Q 018555 154 LISYLINKDNSEGVVLLGHSTGCQDIVHYMRA 185 (354)
Q Consensus 154 ~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~ 185 (354)
+++.|.+ .++..-.+.|-|+|+.++..||..
T Consensus 28 VL~aLeE-~gi~~d~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 28 ILQALEE-AGIPIDAIGGTSIGSFVGGLYARE 58 (269)
T ss_pred HHHHHHH-cCCCccEEEEECHHHHHHHHHHcC
Confidence 4555543 466677899999999999999976
No 304
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=32.14 E-value=60 Score=30.69 Aligned_cols=32 Identities=19% Similarity=0.192 Sum_probs=25.4
Q ss_pred EEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEccc
Q 018555 97 VIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMT 133 (354)
Q Consensus 97 vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R 133 (354)
|||+|... ...|+.+++.|.++|+.|..+-.+
T Consensus 2 il~~~~~~-----p~~~~~la~~L~~~G~~v~~~~~~ 33 (396)
T cd03818 2 ILFVHQNF-----PGQFRHLAPALAAQGHEVVFLTEP 33 (396)
T ss_pred EEEECCCC-----chhHHHHHHHHHHCCCEEEEEecC
Confidence 78888844 234788999999999999998764
No 305
>COG1709 Predicted transcriptional regulator [Transcription]
Probab=31.95 E-value=1.9e+02 Score=25.15 Aligned_cols=42 Identities=26% Similarity=0.455 Sum_probs=27.9
Q ss_pred EEEecCCCCcEEEEECCCCCCCCccccHHHHHHHHhh-CCcEEEEEcc
Q 018555 86 VAFKTGDYQQQVIFIGGLTDGFFATEYLEPLAIALDK-ERWSLVQFLM 132 (354)
Q Consensus 86 ~~~~~~~~~p~vIliHG~~~~~~~~~~~~~la~~La~-~g~~Via~D~ 132 (354)
+.....+-+|.+|.+||+. ....++++-.+++ .++.++.-.+
T Consensus 186 VAirV~~lKP~aVVlHGi~-----~~~vD~lAikiAe~e~IpLvvT~~ 228 (241)
T COG1709 186 VAIRVSPLKPAAVVLHGIP-----PDNVDELAIKIAEIERIPLVVTTM 228 (241)
T ss_pred EEEEccCCCccEEEEecCC-----ccchhHHHHHHHhhcCCceEEecC
Confidence 3334446689999999977 2234568888886 4666666555
No 306
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=31.94 E-value=2.2e+02 Score=21.37 Aligned_cols=80 Identities=16% Similarity=0.208 Sum_probs=49.7
Q ss_pred ccHHHHHHHHhhCCcEEEEEcccccCCCCCCC--C-ccCcH-HHHHHHHHHHHhhCCCCcEEEEEEChhHHHHH--HHHH
Q 018555 111 EYLEPLAIALDKERWSLVQFLMTSSYTGYGTS--S-LQQDA-MEIDQLISYLINKDNSEGVVLLGHSTGCQDIV--HYMR 184 (354)
Q Consensus 111 ~~~~~la~~La~~g~~Via~D~R~~~~G~G~S--~-~~~~~-~dl~~~i~~l~~~~~~~~~~LvGhS~GG~~a~--~~a~ 184 (354)
..+..+.+.|...||-.=.+.+| .+|.+ . ..... +--...++.+.+.++..+++|||-|--.=.-+ .++.
T Consensus 11 nly~~l~~Fl~~~~~P~G~~~Lr----~~~~~~~~~~~~~~~~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~ 86 (100)
T PF09949_consen 11 NLYPFLRDFLRRNGFPAGPLLLR----DYGPSLSGLFKSGAEEHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIAR 86 (100)
T ss_pred HHHHHHHHHHHhcCCCCCceEcc----cCCccccccccCCchhHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHH
Confidence 34677788887778877777775 33322 1 11112 24455666666667778999999986655332 2344
Q ss_pred h-cccccccccEEEE
Q 018555 185 A-NAACSRAVRAAIF 198 (354)
Q Consensus 185 ~-p~~~~~~v~~lIl 198 (354)
+ |+ +|.++.+
T Consensus 87 ~~P~----~i~ai~I 97 (100)
T PF09949_consen 87 RFPG----RILAIYI 97 (100)
T ss_pred HCCC----CEEEEEE
Confidence 4 77 8877754
No 307
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=31.38 E-value=75 Score=26.22 Aligned_cols=31 Identities=13% Similarity=0.054 Sum_probs=24.1
Q ss_pred HHHHHHhhCCCCcEEEEEEChhHHHHHHHHHh
Q 018555 154 LISYLINKDNSEGVVLLGHSTGCQDIVHYMRA 185 (354)
Q Consensus 154 ~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~ 185 (354)
+++.|.+ .++..-.+.|-|.|+.++..|+..
T Consensus 16 vl~aL~e-~gi~~d~v~GtSaGAi~aa~~a~g 46 (172)
T cd07198 16 VAKALRE-RGPLIDIIAGTSAGAIVAALLASG 46 (172)
T ss_pred HHHHHHH-cCCCCCEEEEECHHHHHHHHHHcC
Confidence 4455544 356678999999999999999976
No 308
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=31.02 E-value=4e+02 Score=24.10 Aligned_cols=89 Identities=16% Similarity=0.129 Sum_probs=51.5
Q ss_pred CccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhhCCCCcEEEEEEChhHHHHHHHHHhcc
Q 018555 108 FATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRANA 187 (354)
Q Consensus 108 ~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~p~ 187 (354)
-+....+.+++++.+.|..-+.+-- ..|.. ..-..++-.++++...+..+.+-.+++|-+.+-..++.++..
T Consensus 18 iD~~~l~~l~~~l~~~Gv~gi~v~G-----stGE~-~~Ls~eEr~~l~~~~~~~~~~~~pvi~gv~~~t~~~i~~a~~-- 89 (289)
T cd00951 18 FDEDAYRAHVEWLLSYGAAALFAAG-----GTGEF-FSLTPDEYAQVVRAAVEETAGRVPVLAGAGYGTATAIAYAQA-- 89 (289)
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECc-----CCcCc-ccCCHHHHHHHHHHHHHHhCCCCCEEEecCCCHHHHHHHHHH--
Confidence 4566678889998888887777632 22332 122344555566555553332334455554445566666655
Q ss_pred cccccccEEEEecccCc
Q 018555 188 ACSRAVRAAIFQAPVSD 204 (354)
Q Consensus 188 ~~~~~v~~lIl~~p~~~ 204 (354)
....-+++++++.|...
T Consensus 90 a~~~Gad~v~~~pP~y~ 106 (289)
T cd00951 90 AEKAGADGILLLPPYLT 106 (289)
T ss_pred HHHhCCCEEEECCCCCC
Confidence 22336899988877653
No 309
>TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-dehydro-4-deoxyglucarate dehydratase not only catalyzes the dehydration of the substrate (diol to ketone + water), but causes the decarboxylation of the intermediate product to yield 2-oxoglutarate semialdehyde (2,5-dioxopentanoate). The gene for the enzyme is usually observed in the vicinity of transporters and dehydratases handling D-galactarate and D-gluconate as well as aldehyde dehydrogenases which convert the product to alpha-ketoglutarate.
Probab=31.02 E-value=4.1e+02 Score=24.15 Aligned_cols=89 Identities=13% Similarity=0.071 Sum_probs=50.8
Q ss_pred CccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhhCCCCcEEEEEEChhHHHHHHHHHhcc
Q 018555 108 FATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRANA 187 (354)
Q Consensus 108 ~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~p~ 187 (354)
-+..-++.+++.+.+.|.+-+.+-- ..|.. ..-..++-.++++...+..+.+-.+++|-+..-..+++.+..
T Consensus 23 iD~~~l~~li~~l~~~Gv~gi~v~G-----stGE~-~~Lt~eEr~~v~~~~~~~~~g~~pvi~gv~~~t~~ai~~a~~-- 94 (296)
T TIGR03249 23 FDEAAYRENIEWLLGYGLEALFAAG-----GTGEF-FSLTPAEYEQVVEIAVSTAKGKVPVYTGVGGNTSDAIEIARL-- 94 (296)
T ss_pred cCHHHHHHHHHHHHhcCCCEEEECC-----CCcCc-ccCCHHHHHHHHHHHHHHhCCCCcEEEecCccHHHHHHHHHH--
Confidence 4666688899999888888777622 22322 222344555566555543333334566654333344555544
Q ss_pred cccccccEEEEecccCc
Q 018555 188 ACSRAVRAAIFQAPVSD 204 (354)
Q Consensus 188 ~~~~~v~~lIl~~p~~~ 204 (354)
....-+++++++.|...
T Consensus 95 a~~~Gadav~~~pP~y~ 111 (296)
T TIGR03249 95 AEKAGADGYLLLPPYLI 111 (296)
T ss_pred HHHhCCCEEEECCCCCC
Confidence 22336788888877653
No 310
>TIGR01007 eps_fam capsular exopolysaccharide family. This model describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis(EPS). Atleast 13 genes espA to espM in streptococcus species seem to direct the EPS proteins and all of which share high homology. Functional roles were characterized by gene disruption experiments which resulted in exopolysaccharide-deficient phenotypes.
Probab=30.70 E-value=83 Score=26.64 Aligned_cols=38 Identities=13% Similarity=0.137 Sum_probs=27.7
Q ss_pred cEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcc
Q 018555 95 QQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLM 132 (354)
Q Consensus 95 p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~ 132 (354)
+.+|++-+..+|.+.+..-..++..|++.|++|+.+|.
T Consensus 17 ~kvI~v~s~kgG~GKTt~a~~LA~~la~~G~rVllID~ 54 (204)
T TIGR01007 17 IKVLLITSVKPGEGKSTTSANIAVAFAQAGYKTLLIDG 54 (204)
T ss_pred CcEEEEecCCCCCCHHHHHHHHHHHHHhCCCeEEEEeC
Confidence 44555555444545555567789999999999999998
No 311
>PRK05568 flavodoxin; Provisional
Probab=30.65 E-value=2.4e+02 Score=22.09 Aligned_cols=35 Identities=9% Similarity=0.106 Sum_probs=22.8
Q ss_pred EEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEccc
Q 018555 96 QVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMT 133 (354)
Q Consensus 96 ~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R 133 (354)
.||+.-+.| .+...-+.+++.+.+.|..|..+|+.
T Consensus 5 ~IvY~S~~G---nT~~~a~~i~~~~~~~g~~v~~~~~~ 39 (142)
T PRK05568 5 NIIYWSGTG---NTEAMANLIAEGAKENGAEVKLLNVS 39 (142)
T ss_pred EEEEECCCc---hHHHHHHHHHHHHHHCCCeEEEEECC
Confidence 455555555 44444567777777778888888874
No 312
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=30.61 E-value=3.2e+02 Score=26.30 Aligned_cols=77 Identities=8% Similarity=0.041 Sum_probs=38.0
Q ss_pred CcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCc--cCcHHHHHHHHHHHHh--hCCCCcEEE
Q 018555 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSL--QQDAMEIDQLISYLIN--KDNSEGVVL 169 (354)
Q Consensus 94 ~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~--~~~~~dl~~~i~~l~~--~~~~~~~~L 169 (354)
+.+||+++-+................|.+.|+.|+-+... ...+|.... -...+++...+..+.. .+..+++.+
T Consensus 116 ~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~ii~P~~g--~la~~~~g~gr~~~~~~I~~~~~~~~~~~~l~gk~vlI 193 (399)
T PRK05579 116 TAPVLVAPAMNTQMWENPATQRNLATLRSRGVEIIGPASG--RLACGDVGPGRMAEPEEIVAAAERALSPKDLAGKRVLI 193 (399)
T ss_pred CCCEEEEeCCChhHcCCHHHHHHHHHHHHCCCEEECCCCc--cccCCCcCCCCCCCHHHHHHHHHHHhhhcccCCCEEEE
Confidence 3455555543311123333456677888889999877651 112333322 2234555444433322 233456666
Q ss_pred EEE
Q 018555 170 LGH 172 (354)
Q Consensus 170 vGh 172 (354)
-|-
T Consensus 194 TgG 196 (399)
T PRK05579 194 TAG 196 (399)
T ss_pred eCC
Confidence 665
No 313
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=30.45 E-value=82 Score=26.37 Aligned_cols=32 Identities=13% Similarity=0.016 Sum_probs=24.4
Q ss_pred HHHHHHHhhCCCCcEEEEEEChhHHHHHHHHHh
Q 018555 153 QLISYLINKDNSEGVVLLGHSTGCQDIVHYMRA 185 (354)
Q Consensus 153 ~~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~ 185 (354)
.+++.|.+ .++..-+++|-|.|+.+|..++..
T Consensus 16 Gvl~~L~e-~~~~~d~i~GtSaGai~aa~~a~g 47 (194)
T cd07207 16 GALKALEE-AGILKKRVAGTSAGAITAALLALG 47 (194)
T ss_pred HHHHHHHH-cCCCcceEEEECHHHHHHHHHHcC
Confidence 45555554 355667899999999999999875
No 314
>PRK09936 hypothetical protein; Provisional
Probab=30.41 E-value=1.8e+02 Score=26.64 Aligned_cols=49 Identities=10% Similarity=0.075 Sum_probs=38.5
Q ss_pred CccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHh
Q 018555 108 FATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLIN 160 (354)
Q Consensus 108 ~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~ 160 (354)
.+...|+.+.+.+...|++.+.+-. .++|.+++...---+...++...+
T Consensus 35 ~~~~qWq~~~~~~~~~G~~tLivQW----t~yG~~~fg~~~g~La~~l~~A~~ 83 (296)
T PRK09936 35 VTDTQWQGLWSQLRLQGFDTLVVQW----TRYGDADFGGQRGWLAKRLAAAQQ 83 (296)
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEEe----eeccCCCcccchHHHHHHHHHHHH
Confidence 3456699999999999999999999 899999777665556666665544
No 315
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=30.15 E-value=1.4e+02 Score=29.42 Aligned_cols=78 Identities=13% Similarity=0.169 Sum_probs=48.0
Q ss_pred CcEEEEECCCCCCC----CccccHHHHHHHHhh------CCcEEEEEcccccCCCCCCCCc-cCcHHHHHHHHHHHHhhC
Q 018555 94 QQQVIFIGGLTDGF----FATEYLEPLAIALDK------ERWSLVQFLMTSSYTGYGTSSL-QQDAMEIDQLISYLINKD 162 (354)
Q Consensus 94 ~p~vIliHG~~~~~----~~~~~~~~la~~La~------~g~~Via~D~R~~~~G~G~S~~-~~~~~dl~~~i~~l~~~~ 162 (354)
+-.||+.||+.|.. .+..||+.+.+.+.. .=||++..== -+|+.... +...+-+.++++|+.+
T Consensus 353 GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPG----m~HC~gG~g~~~~d~l~aL~~WVE~-- 426 (474)
T PF07519_consen 353 GGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPG----MGHCGGGPGPDPFDALTALVDWVEN-- 426 (474)
T ss_pred CCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCC----CcccCCCCCCCCCCHHHHHHHHHhC--
Confidence 45799999999853 466788988888753 1345555511 23333222 3345678888888875
Q ss_pred CCCcEEEEEEChhHH
Q 018555 163 NSEGVVLLGHSTGCQ 177 (354)
Q Consensus 163 ~~~~~~LvGhS~GG~ 177 (354)
|..+-.|++......
T Consensus 427 G~AP~~l~at~~~~~ 441 (474)
T PF07519_consen 427 GKAPETLVATKFDND 441 (474)
T ss_pred CCCCCeeEEEEecCC
Confidence 455556666655443
No 316
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=29.91 E-value=2.3e+02 Score=21.12 Aligned_cols=44 Identities=23% Similarity=0.241 Sum_probs=30.2
Q ss_pred CcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCC
Q 018555 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSS 143 (354)
Q Consensus 94 ~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~ 143 (354)
.++||++.+-.|-......-+.+++.|.. =+++..|- .|||...
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~--s~lvt~~g----~gHg~~~ 77 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPG--SRLVTVDG----AGHGVYA 77 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCC--ceEEEEec----cCcceec
Confidence 47899999977654444444666666663 47888877 6888764
No 317
>COG3562 KpsS Capsule polysaccharide export protein [Cell envelope biogenesis, outer membrane]
Probab=29.75 E-value=2.5e+02 Score=26.30 Aligned_cols=69 Identities=14% Similarity=0.337 Sum_probs=52.4
Q ss_pred cEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCC---------ccCcHHHHHHHHHHHHhhCCCC
Q 018555 95 QQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSS---------LQQDAMEIDQLISYLINKDNSE 165 (354)
Q Consensus 95 p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~---------~~~~~~dl~~~i~~l~~~~~~~ 165 (354)
..++++-|-- ..++.+++..|...|-+|+.+++- -|.+. ..+..++..+.++.+..+..++
T Consensus 14 ~NflllQGPv-----g~ff~~la~~le~~~~~v~k~NfN-----~GD~~fyp~~~t~~~~~~~D~~~~~~r~f~~~hsi~ 83 (403)
T COG3562 14 ENFLLLQGPV-----GPFFQELASWLELNGKRVFKINFN-----AGDSTFYPQAGTVVYNDNLDDFPTFLRKFIAQHSID 83 (403)
T ss_pred cceEeeeCCc-----chHHHHHHHHHHhcCceEEEEeec-----CCCceeeecCCccccccchhHHHHHHHHHHHhccCC
Confidence 5788888844 357888999999899999999993 34433 2234667888888888877888
Q ss_pred cEEEEEEC
Q 018555 166 GVVLLGHS 173 (354)
Q Consensus 166 ~~~LvGhS 173 (354)
.+++.|--
T Consensus 84 aivlfgd~ 91 (403)
T COG3562 84 AIVLFGDT 91 (403)
T ss_pred ceEEeccc
Confidence 89999854
No 318
>PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport. Some of them function as molecular chaperones, subunits of proteolytic complexes or independent proteases (FtsH, Lon). They also act as DNA helicases and transcription factors []. AAA ATPases belong to the AAA+ superfamily of ringshaped P-loop NTPases, which act via the energy-dependent unfolding of macromolecules [, ]. There are six major clades of AAA domains (proteasome subunits, metalloproteases, domains D1 and D2 of ATPases with two AAA domains, the MSP1/katanin/spastin group and BCS1 and it homologues), as well as a number of deeply branching minor clades []. They assemble into oligomeric assemblies (often hexamers) that form a ring-shaped structure with a central pore. These proteins produce a molecular motor that couples ATP binding and hydrolysis to changes in conformational states that act upon a target substrate, either translocating or remodelling it []. They are found in all living organisms and share the common feature of the presence of a highly conserved AAA domain called the AAA module. This domain is responsible for ATP binding and hydrolysis. It contains 200-250 residues, among them there are two classical motifs, Walker A (GX4GKT) and Walker B (HyDE) []. The functional variety seen between AAA ATPases is in part due to their extensive number of accessory domains and factors, and to their variable organisation within oligomeric assemblies, in addition to changes in key functional residues within the ATPase domain itself. More information about these proteins can be found at Protein of the Month: AAA ATPases [].; GO: 0005524 ATP binding; PDB: 3H4M_A 1NSF_A 1D2N_A 1HQY_E 1DO0_E 1DO2_C 1G4B_E 1HT1_F 1G4A_F 1HT2_G ....
Probab=29.64 E-value=1.5e+02 Score=22.48 Aligned_cols=54 Identities=15% Similarity=0.097 Sum_probs=28.0
Q ss_pred EEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHH
Q 018555 98 IFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLI 159 (354)
Q Consensus 98 IliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~ 159 (354)
|++||-.+ .+-+..-+.+++.+ ++.++.+|. .-............+..+++...
T Consensus 1 ill~G~~G-~GKT~l~~~la~~l---~~~~~~i~~----~~~~~~~~~~~~~~i~~~~~~~~ 54 (132)
T PF00004_consen 1 ILLHGPPG-TGKTTLARALAQYL---GFPFIEIDG----SELISSYAGDSEQKIRDFFKKAK 54 (132)
T ss_dssp EEEESSTT-SSHHHHHHHHHHHT---TSEEEEEET----THHHTSSTTHHHHHHHHHHHHHH
T ss_pred CEEECcCC-CCeeHHHHHHHhhc---ccccccccc----ccccccccccccccccccccccc
Confidence 67888652 22333334455544 688888888 33332222333445555555543
No 319
>PHA02114 hypothetical protein
Probab=29.29 E-value=77 Score=23.68 Aligned_cols=33 Identities=6% Similarity=0.090 Sum_probs=25.9
Q ss_pred EEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEc
Q 018555 96 QVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFL 131 (354)
Q Consensus 96 ~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D 131 (354)
+|||=--+. .+..-|-.++..|.+.||.|++-.
T Consensus 84 tivldvn~a---msr~pwi~v~s~le~~g~~vvatq 116 (127)
T PHA02114 84 TIVLDVNYA---MSRAPWIKVISRLEEAGFNVVATQ 116 (127)
T ss_pred eEEEEehhh---hccCcHHHHHHHHHhcCceeeehh
Confidence 566665666 667778889999999999999864
No 320
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=28.53 E-value=92 Score=27.08 Aligned_cols=31 Identities=16% Similarity=0.165 Sum_probs=23.2
Q ss_pred HHHHHHhhCCCCcEEEEEEChhHHHHHHHHHh
Q 018555 154 LISYLINKDNSEGVVLLGHSTGCQDIVHYMRA 185 (354)
Q Consensus 154 ~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~ 185 (354)
+++.|.+ .+++.-.++|-|.|+.++..++..
T Consensus 18 vL~aL~e-~gi~~~~i~GtSaGAi~aa~~a~g 48 (221)
T cd07210 18 FLAALLE-MGLEPSAISGTSAGALVGGLFASG 48 (221)
T ss_pred HHHHHHH-cCCCceEEEEeCHHHHHHHHHHcC
Confidence 4445443 345667899999999999999875
No 321
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=28.38 E-value=79 Score=27.51 Aligned_cols=35 Identities=9% Similarity=0.247 Sum_probs=26.8
Q ss_pred cEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEc
Q 018555 95 QQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFL 131 (354)
Q Consensus 95 p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D 131 (354)
..||++|.... .+......++..|.++||+++.++
T Consensus 187 g~IiLlHd~~~--~t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 187 GAILLLHAVSK--DNAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CcEEEEECCCC--CHHHHHHHHHHHHHHCCCEEEEhH
Confidence 46888886431 456678999999999999999875
No 322
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=28.26 E-value=75 Score=29.15 Aligned_cols=31 Identities=19% Similarity=0.173 Sum_probs=23.9
Q ss_pred HHHHHHhhCCCCcEEEEEEChhHHHHHHHHHh
Q 018555 154 LISYLINKDNSEGVVLLGHSTGCQDIVHYMRA 185 (354)
Q Consensus 154 ~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~ 185 (354)
+++.|.+ .+++.-+|.|-|+|+.++..||..
T Consensus 29 Vl~aL~e-~gi~~~~iaGtS~GAiva~l~A~g 59 (306)
T COG1752 29 VLKALEE-AGIPIDVIAGTSAGAIVAALYAAG 59 (306)
T ss_pred HHHHHHH-cCCCccEEEecCHHHHHHHHHHcC
Confidence 3444433 357788999999999999999975
No 323
>PRK10566 esterase; Provisional
Probab=28.04 E-value=1.5e+02 Score=25.71 Aligned_cols=60 Identities=13% Similarity=0.179 Sum_probs=36.1
Q ss_pred CcEEEEECCCCCCCCccccHHHHHHHHhhCCc--EEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHh
Q 018555 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERW--SLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLIN 160 (354)
Q Consensus 94 ~p~vIliHG~~~~~~~~~~~~~la~~La~~g~--~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~ 160 (354)
..+++++||-.|.......-+.+.+.|.++|. .+...-+.+ .||+.. .+.+.+.+++|.+
T Consensus 186 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~--~~H~~~-----~~~~~~~~~fl~~ 247 (249)
T PRK10566 186 DRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPG--VRHRIT-----PEALDAGVAFFRQ 247 (249)
T ss_pred CCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCC--CCCccC-----HHHHHHHHHHHHh
Confidence 35689999988765555555677777877665 344433410 345432 3456667777653
No 324
>PF14763 HPS3_C: Hermansky-Pudlak syndrome 3, C-terminal
Probab=28.03 E-value=17 Score=33.25 Aligned_cols=66 Identities=20% Similarity=0.289 Sum_probs=49.5
Q ss_pred HHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCC-----------CeEEEecCCCccc-C---ccHHHHHHHH
Q 018555 273 QRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGG-----------AEKVEIEHGIHSL-S---NRVKEAVQAI 337 (354)
Q Consensus 273 ~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~-----------~~~~~i~~agH~~-~---~~p~~~~~~i 337 (354)
-..+-|.- |-|++++.+-.++|.. ++..+++.-|+ ...+-+++|+|++ . .+.+.+.+.+
T Consensus 54 lv~gFi~e-PrLL~~~~~~~v~Pt~-----la~~lk~tqpgLlVas~v~L~eN~ki~leead~fFk~lc~~~ed~~pqll 127 (353)
T PF14763_consen 54 LVYGFIEE-PRLLIQQKKGQVVPTE-----LAQHLKETQPGLLVASVVGLHENNKIGLEEADSFFKVLCGKDEDTVPQLL 127 (353)
T ss_pred HHHHhhcc-cHHHHhccCCeeccHH-----HHHHHHhcCCchHHHHHHHHhhccccchHHHHHHHHHHhcCCcccchhHH
Confidence 34566777 9999999999999988 77777766555 1345689999998 2 3556678888
Q ss_pred HHHHHhh
Q 018555 338 IDFVKRE 344 (354)
Q Consensus 338 ~~Fl~~~ 344 (354)
.+|++.+
T Consensus 128 VDFWEa~ 134 (353)
T PF14763_consen 128 VDFWEAQ 134 (353)
T ss_pred HHHHHHH
Confidence 8988764
No 325
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=27.41 E-value=50 Score=29.43 Aligned_cols=20 Identities=25% Similarity=0.534 Sum_probs=15.5
Q ss_pred CCCcEEEEEEChhHHHHHHH
Q 018555 163 NSEGVVLLGHSTGCQDIVHY 182 (354)
Q Consensus 163 ~~~~~~LvGhS~GG~~a~~~ 182 (354)
....|+++|||+|..-...+
T Consensus 233 ~i~~I~i~GhSl~~~D~~Yf 252 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEVDYPYF 252 (270)
T ss_pred CCCEEEEEeCCCchhhHHHH
Confidence 46899999999998655433
No 326
>cd02042 ParA ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation. ParB binds to DNA sequences adjacent to the origin of replication and localizes to opposite cell poles shortly following the initiation of DNA replication. ParB regulates the ParA ATPase activity by promoting nucleotide exchange in a fashion reminiscent of the exchange factors of eukaryotic G proteins. ADP-bound ParA binds single-stranded DNA, whereas the ATP-bound form dissociates ParB from its DNA binding sites. Increasing the fraction of ParA-ADP in the cell inhibits cell division, suggesting that this simple nucleotide switch may regulate cytokinesis. ParA shares sequence similarity to a conserved and widespread family of ATPases which includes the repA protein of the repABC operon in R. etli Sym plasmid. This operon is involved in the plasmid replication and partition.
Probab=27.03 E-value=79 Score=23.28 Aligned_cols=34 Identities=18% Similarity=0.098 Sum_probs=23.7
Q ss_pred EECCCCCCCCccccHHHHHHHHhhCCcEEEEEcc
Q 018555 99 FIGGLTDGFFATEYLEPLAIALDKERWSLVQFLM 132 (354)
Q Consensus 99 liHG~~~~~~~~~~~~~la~~La~~g~~Via~D~ 132 (354)
.+.|..+|.+.+..-..++..|+++|.+|+.+|.
T Consensus 3 ~~~~~kgG~Gkst~~~~la~~~~~~~~~vl~~d~ 36 (104)
T cd02042 3 AVANQKGGVGKTTTAVNLAAALARRGKRVLLIDL 36 (104)
T ss_pred EEEeCCCCcCHHHHHHHHHHHHHhCCCcEEEEeC
Confidence 3344333444555556788899888999999998
No 327
>PRK03620 5-dehydro-4-deoxyglucarate dehydratase; Provisional
Probab=26.94 E-value=4.9e+02 Score=23.75 Aligned_cols=89 Identities=15% Similarity=0.126 Sum_probs=51.0
Q ss_pred CccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhhCCCCcEEEEEEChhHHHHHHHHHhcc
Q 018555 108 FATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRANA 187 (354)
Q Consensus 108 ~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~p~ 187 (354)
-+..-++.+++.|.++|..-+.+-- ..|.. ..-..++-.++++...+..+.+-.+++|-+..-..++.++..
T Consensus 25 iD~~~l~~li~~l~~~Gv~Gi~~~G-----stGE~-~~Lt~eEr~~~~~~~~~~~~~~~pvi~gv~~~t~~~i~~~~~-- 96 (303)
T PRK03620 25 FDEAAYREHLEWLAPYGAAALFAAG-----GTGEF-FSLTPDEYSQVVRAAVETTAGRVPVIAGAGGGTAQAIEYAQA-- 96 (303)
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECc-----CCcCc-ccCCHHHHHHHHHHHHHHhCCCCcEEEecCCCHHHHHHHHHH--
Confidence 4666688899999888888777632 12322 122234555555555443333334555655334456666655
Q ss_pred cccccccEEEEecccCc
Q 018555 188 ACSRAVRAAIFQAPVSD 204 (354)
Q Consensus 188 ~~~~~v~~lIl~~p~~~ 204 (354)
....-++++++..|...
T Consensus 97 a~~~Gadav~~~pP~y~ 113 (303)
T PRK03620 97 AERAGADGILLLPPYLT 113 (303)
T ss_pred HHHhCCCEEEECCCCCC
Confidence 22236889988877543
No 328
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=26.53 E-value=48 Score=31.87 Aligned_cols=60 Identities=13% Similarity=0.155 Sum_probs=34.4
Q ss_pred CCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHc--CC--CeEEEecCCCccc---C-ccHHHHHHHHHHHHHhhC
Q 018555 279 ANTPCQVIFSMADEYVPEYVDKKALVERLCRAM--GG--AEKVEIEHGIHSL---S-NRVKEAVQAIIDFVKREG 345 (354)
Q Consensus 279 ~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~--~~--~~~~~i~~agH~~---~-~~p~~~~~~i~~Fl~~~~ 345 (354)
.. |++|+.|+-|.+-+.. ...+.+.+ .+ .-.+.+||-|+.. + ++.+.+.+.|++||..+.
T Consensus 189 p~-P~VIv~gGlDs~qeD~------~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~~~l~~aVLd~L~~~p 256 (411)
T PF06500_consen 189 PY-PTVIVCGGLDSLQEDL------YRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDSSRLHQAVLDYLASRP 256 (411)
T ss_dssp -E-EEEEEE--TTS-GGGG------HHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-CCHHHHHHHHHHHHST
T ss_pred CC-CEEEEeCCcchhHHHH------HHHHHHHHHhCCCEEEEEccCCCcccccCCCCcCHHHHHHHHHHHHhcCC
Confidence 45 9999999999865443 22332221 12 2345589998875 2 234578999999998764
No 329
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=25.84 E-value=70 Score=24.86 Aligned_cols=22 Identities=9% Similarity=0.209 Sum_probs=19.1
Q ss_pred cHHHHHHHHhhCCcEEEEEccc
Q 018555 112 YLEPLAIALDKERWSLVQFLMT 133 (354)
Q Consensus 112 ~~~~la~~La~~g~~Via~D~R 133 (354)
++..+++.|++.||.|++.|.-
T Consensus 24 ~~~~VA~~L~e~g~dv~atDI~ 45 (129)
T COG1255 24 FFLDVAKRLAERGFDVLATDIN 45 (129)
T ss_pred hHHHHHHHHHHcCCcEEEEecc
Confidence 4566899999999999999984
No 330
>PRK13705 plasmid-partitioning protein SopA; Provisional
Probab=25.81 E-value=1.1e+02 Score=29.31 Aligned_cols=40 Identities=18% Similarity=0.080 Sum_probs=27.8
Q ss_pred CCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcc
Q 018555 93 YQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLM 132 (354)
Q Consensus 93 ~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~ 132 (354)
..+.||-+...-+|.+-+..-..++..|+.+|++|+.+|+
T Consensus 104 ~~~~vIai~n~KGGVGKTT~a~nLA~~LA~~G~rVLlID~ 143 (388)
T PRK13705 104 VFPPVIGVAAHKGGVYKTSVSVHLAQDLALKGLRVLLVEG 143 (388)
T ss_pred CCCeEEEEECCCCCchHHHHHHHHHHHHHhcCCCeEEEcC
Confidence 3445555554444544555567789999999999999994
No 331
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=25.71 E-value=98 Score=26.70 Aligned_cols=31 Identities=16% Similarity=0.162 Sum_probs=23.8
Q ss_pred HHHHHHhhCCCCcEEEEEEChhHHHHHHHHHh
Q 018555 154 LISYLINKDNSEGVVLLGHSTGCQDIVHYMRA 185 (354)
Q Consensus 154 ~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~ 185 (354)
+++.|.+ .+...-.+.|-|.|+.++..++..
T Consensus 16 vl~aL~e-~g~~~d~i~GtS~GAl~aa~~a~~ 46 (215)
T cd07209 16 VLKALAE-AGIEPDIISGTSIGAINGALIAGG 46 (215)
T ss_pred HHHHHHH-cCCCCCEEEEECHHHHHHHHHHcC
Confidence 4555544 345666899999999999999987
No 332
>COG3933 Transcriptional antiterminator [Transcription]
Probab=25.67 E-value=4.3e+02 Score=25.80 Aligned_cols=78 Identities=12% Similarity=0.098 Sum_probs=51.4
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhhCCCCcEEEEE
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLG 171 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~~~~~~~~LvG 171 (354)
+.-.+||+-||.. +.......++.|-. .=-+.++|++ ++....|+.+.+....++.+..+=+++=
T Consensus 107 ~~v~vIiiAHG~s----TASSmaevanrLL~-~~~~~aiDMP----------Ldvsp~~vle~l~e~~k~~~~~~GlllL 171 (470)
T COG3933 107 PRVKVIIIAHGYS----TASSMAEVANRLLG-EEIFIAIDMP----------LDVSPSDVLEKLKEYLKERDYRSGLLLL 171 (470)
T ss_pred CceeEEEEecCcc----hHHHHHHHHHHHhh-ccceeeecCC----------CcCCHHHHHHHHHHHHHhcCccCceEEE
Confidence 4456899999988 44445678888775 4578899993 5555666555443333444555545666
Q ss_pred EChhHHHHHHHHH
Q 018555 172 HSTGCQDIVHYMR 184 (354)
Q Consensus 172 hS~GG~~a~~~a~ 184 (354)
-.||....+.=..
T Consensus 172 VDMGSL~~f~~~i 184 (470)
T COG3933 172 VDMGSLTSFGSII 184 (470)
T ss_pred EecchHHHHHHHH
Confidence 7999988865543
No 333
>PRK13753 dihydropteroate synthase; Provisional
Probab=25.66 E-value=1.7e+02 Score=26.58 Aligned_cols=59 Identities=12% Similarity=-0.027 Sum_probs=31.3
Q ss_pred HHHHhhCCc--EEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhhCCCCcEEEEEEChhHHHHH
Q 018555 117 AIALDKERW--SLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLGHSTGCQDIV 180 (354)
Q Consensus 117 a~~La~~g~--~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~~~~~~~~LvGhS~GG~~a~ 180 (354)
++.+.+.|. .=+.+|.. .|||.+...++-..+..-++.|... ....+|+|+|-=.++.-
T Consensus 157 i~~~~~~Gi~~~~IilDPG---iGF~k~k~~~~n~~ll~~l~~l~~~--~g~PvLvg~SRKsfig~ 217 (279)
T PRK13753 157 VSALRRSGVAADRLILDPG---MGFFLSPAPETSLHVLSNLQKLKSA--LGLPLLVSVSRKSFLGA 217 (279)
T ss_pred HHHHHHcCCChhhEEEeCC---CCCCCCCChHHHHHHHHhHHHHHHh--CCCceEEEccHhHHHHH
Confidence 333444576 35778873 4554332222222233333444322 35589999998887763
No 334
>cd04888 ACT_PheB-BS C-terminal ACT domain of a small (~147 a.a.) putative phenylalanine biosynthetic pathway protein described in Bacillus subtilis (BS) PheB (PheB-BS) and related domains. This CD includes the C-terminal ACT domain of a small (~147 a.a.) putative phenylalanine biosynthetic pathway protein described in Bacillus subtilis (BS) PheB (PheB-BS) and other related ACT domains. In B. subtilis, the upstream gene of pheB, pheA encodes prephenate dehydratase (PDT). The presumed product of the pheB gene is chorismate mutase (CM). The deduced product of the B. subtilis pheB gene, however, has no significant homology to the CM portion of the bifunctional CM-PDT of Escherichia coli. The presence of an ACT domain lends support to the prediction that these proteins function as a phenylalanine-binding regulatory protein. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=25.48 E-value=1.5e+02 Score=20.19 Aligned_cols=61 Identities=20% Similarity=0.223 Sum_probs=39.7
Q ss_pred ccHHHHHHHHhhCCcEEEEEcccccCCCCCCCC---ccCcHH-HHHHHHHHHHhhCCCCcEEEEE
Q 018555 111 EYLEPLAIALDKERWSLVQFLMTSSYTGYGTSS---LQQDAM-EIDQLISYLINKDNSEGVVLLG 171 (354)
Q Consensus 111 ~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~---~~~~~~-dl~~~i~~l~~~~~~~~~~LvG 171 (354)
..+..+.+.|++.|.++..+.......|...-. ...+.+ ++..+++.|++.-+...+.++|
T Consensus 12 g~l~~I~~~la~~~inI~~i~~~~~~~~~~~i~~~v~v~~~~~~l~~l~~~L~~i~~V~~v~~~~ 76 (76)
T cd04888 12 GVLSKVLNTIAQVRGNVLTINQNIPIHGRANVTISIDTSTMNGDIDELLEELREIDGVEKVELVG 76 (76)
T ss_pred chHHHHHHHHHHcCCCEEEEEeCCCCCCeEEEEEEEEcCchHHHHHHHHHHHhcCCCeEEEEEeC
Confidence 356789999999999999997731101111111 113444 8888888888766677777765
No 335
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=25.39 E-value=91 Score=26.28 Aligned_cols=29 Identities=28% Similarity=0.337 Sum_probs=19.5
Q ss_pred EEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcc
Q 018555 98 IFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLM 132 (354)
Q Consensus 98 IliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~ 132 (354)
|.+.|+| + .=..++-.|+++||.|+.+|.
T Consensus 3 I~ViGlG---y---vGl~~A~~lA~~G~~V~g~D~ 31 (185)
T PF03721_consen 3 IAVIGLG---Y---VGLPLAAALAEKGHQVIGVDI 31 (185)
T ss_dssp EEEE--S---T---THHHHHHHHHHTTSEEEEE-S
T ss_pred EEEECCC---c---chHHHHHHHHhCCCEEEEEeC
Confidence 3445766 2 235688899999999999998
No 336
>TIGR03029 EpsG chain length determinant protein tyrosine kinase EpsG. The proteins in this family are homologs of the EpsG protein found in Methylobacillus strain 12S and are generally found in operons with other Eps homologs. The protein is believed to function as the protein tyrosine kinase component of the chain length regulator (along with the transmembrane component EpsF).
Probab=25.33 E-value=89 Score=27.96 Aligned_cols=41 Identities=10% Similarity=-0.032 Sum_probs=28.6
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcc
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLM 132 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~ 132 (354)
+.++.+|.+-+..+|.+.+..-..++..|++.|.+|+.+|.
T Consensus 100 ~~~~~vi~vts~~~g~Gktt~a~nLA~~la~~g~~VllID~ 140 (274)
T TIGR03029 100 SEGRKALAVVSAKSGEGCSYIAANLAIVFSQLGEKTLLIDA 140 (274)
T ss_pred CCCCeEEEEECCCCCCCHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 33444555554444555555567789999989999999998
No 337
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=25.31 E-value=1.4e+02 Score=20.83 Aligned_cols=33 Identities=9% Similarity=0.252 Sum_probs=18.4
Q ss_pred CcEEEEECCCCCCCCccccHHHHHHHHhh-CCcEEEEEc
Q 018555 94 QQQVIFIGGLTDGFFATEYLEPLAIALDK-ERWSLVQFL 131 (354)
Q Consensus 94 ~p~vIliHG~~~~~~~~~~~~~la~~La~-~g~~Via~D 131 (354)
.|.++++||-. ..--+.++...++ +|+.++.+-
T Consensus 31 ~~~~~lvhGga-----~~GaD~iA~~wA~~~gv~~~~~~ 64 (71)
T PF10686_consen 31 HPDMVLVHGGA-----PKGADRIAARWARERGVPVIRFP 64 (71)
T ss_pred CCCEEEEECCC-----CCCHHHHHHHHHHHCCCeeEEeC
Confidence 35677888833 1122445555543 677777663
No 338
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=25.09 E-value=4.4e+02 Score=22.92 Aligned_cols=62 Identities=13% Similarity=0.028 Sum_probs=35.5
Q ss_pred HHHHHHHHhhCCcEEEEEcccccCCCCCCC-Ccc---CcHHHHHHHHHHHHhhCCCCcEEEEEEChhH
Q 018555 113 LEPLAIALDKERWSLVQFLMTSSYTGYGTS-SLQ---QDAMEIDQLISYLINKDNSEGVVLLGHSTGC 176 (354)
Q Consensus 113 ~~~la~~La~~g~~Via~D~R~~~~G~G~S-~~~---~~~~dl~~~i~~l~~~~~~~~~~LvGhS~GG 176 (354)
-..+++.|.++|++|+..|.+......... ... .+.+++.++++.+.+.++ ++.++=|.-|.
T Consensus 22 G~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--~id~li~~Ag~ 87 (266)
T PRK06171 22 GLAIVKELLANGANVVNADIHGGDGQHENYQFVPTDVSSAEEVNHTVAEIIEKFG--RIDGLVNNAGI 87 (266)
T ss_pred HHHHHHHHHHCCCEEEEEeCCccccccCceEEEEccCCCHHHHHHHHHHHHHHcC--CCCEEEECCcc
Confidence 356888898899999999874211111100 011 224567777777765543 44455565553
No 339
>KOG3062 consensus RNA polymerase II elongator associated protein [General function prediction only]
Probab=25.08 E-value=4.7e+02 Score=23.20 Aligned_cols=72 Identities=19% Similarity=0.115 Sum_probs=38.8
Q ss_pred EEEEECCCCCCCCccccHHHHHHHHhhCC--cEEEEEcccccCCCCCCCCccCcHHH---HH-HHHHHHHhhCCCCcEEE
Q 018555 96 QVIFIGGLTDGFFATEYLEPLAIALDKER--WSLVQFLMTSSYTGYGTSSLQQDAME---ID-QLISYLINKDNSEGVVL 169 (354)
Q Consensus 96 ~vIliHG~~~~~~~~~~~~~la~~La~~g--~~Via~D~R~~~~G~G~S~~~~~~~d---l~-~~i~~l~~~~~~~~~~L 169 (354)
++|++-|++.+ +-+..-..|.+.|.+.| +.|+..|--+ .|.++.+...+..+ +. ++...+.+.+....+++
T Consensus 2 pLVvi~G~P~S-GKstrA~~L~~~l~~~~~K~~v~ii~des--lg~~~ns~y~~s~~EK~lRg~L~S~v~R~Lsk~~iVI 78 (281)
T KOG3062|consen 2 PLVVICGLPCS-GKSTRAVELREALKERGTKQSVRIIDDES--LGIEKNSNYGDSQAEKALRGKLRSAVDRSLSKGDIVI 78 (281)
T ss_pred CeEEEeCCCCC-CchhHHHHHHHHHHhhcccceEEEechhh--cCCCCcccccccHHHHHHHHHHHHHHHhhcccCcEEE
Confidence 57778888833 23333577888998866 4677777532 45555222222111 11 22233333455566666
Q ss_pred E
Q 018555 170 L 170 (354)
Q Consensus 170 v 170 (354)
+
T Consensus 79 ~ 79 (281)
T KOG3062|consen 79 V 79 (281)
T ss_pred E
Confidence 5
No 340
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=24.90 E-value=1.4e+02 Score=28.78 Aligned_cols=62 Identities=13% Similarity=0.140 Sum_probs=39.8
Q ss_pred HHhcCCCCCcEEEEeeCCCCCCCchhcHHHHHHHHHHHcCCCeEEEecCCCccc-C-c----cHHHHHHHHHHHHH
Q 018555 273 QRLGHMANTPCQVIFSMADEYVPEYVDKKALVERLCRAMGGAEKVEIEHGIHSL-S-N----RVKEAVQAIIDFVK 342 (354)
Q Consensus 273 ~~l~~i~~~PvLvi~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~-~-~----~p~~~~~~i~~Fl~ 342 (354)
..+.+-.. -+|+|.|++|+..-.. + .+.+...+..+.+.||++|.. + . +.++....|.+|..
T Consensus 345 ~Wvr~~~~-rmlFVYG~nDPW~A~~------f-~l~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~WaG 412 (448)
T PF05576_consen 345 RWVRNNGP-RMLFVYGENDPWSAEP------F-RLGKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWAG 412 (448)
T ss_pred HHHHhCCC-eEEEEeCCCCCcccCc------c-ccCCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHcC
Confidence 34455566 8999999999866433 1 121222356677899999998 3 2 22356677777764
No 341
>PRK13869 plasmid-partitioning protein RepA; Provisional
Probab=24.89 E-value=1.3e+02 Score=28.94 Aligned_cols=38 Identities=21% Similarity=0.152 Sum_probs=27.3
Q ss_pred cEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcc
Q 018555 95 QQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLM 132 (354)
Q Consensus 95 p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~ 132 (354)
..||.+...-+|.+-+..-..|+..|+..|++|+.+|+
T Consensus 121 ~~vIav~n~KGGvGKTTta~nLA~~LA~~G~rVLlIDl 158 (405)
T PRK13869 121 LQVIAVTNFKGGSGKTTTSAHLAQYLALQGYRVLAVDL 158 (405)
T ss_pred ceEEEEEcCCCCCCHHHHHHHHHHHHHhcCCceEEEcC
Confidence 35555554444445555567789999999999999999
No 342
>PRK14457 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=24.61 E-value=4.7e+02 Score=24.56 Aligned_cols=74 Identities=18% Similarity=0.112 Sum_probs=45.9
Q ss_pred EEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCC-ccCcHHHHHHHHHHHHhhCCCCcEEEEEEChh
Q 018555 97 VIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSS-LQQDAMEIDQLISYLINKDNSEGVVLLGHSTG 175 (354)
Q Consensus 97 vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~-~~~~~~dl~~~i~~l~~~~~~~~~~LvGhS~G 175 (354)
.++|+|+. .+.+..+.+++.|...+..|-.+.+. -.|.+. .+...+++.++.+.|.. .|+ .+.+..|+|
T Consensus 260 y~LIpGvN---Ds~e~a~~La~~l~~l~~~VnLIPyn----p~~~~~~~~ps~e~i~~f~~~L~~-~Gi--~vtvR~~~G 329 (345)
T PRK14457 260 YILLGGVN---DLPEHAEELANLLRGFQSHVNLIPYN----PIDEVEFQRPSPKRIQAFQRVLEQ-RGV--AVSVRASRG 329 (345)
T ss_pred EEEECCcC---CCHHHHHHHHHHHhcCCCeEEEecCC----CCCCCCCCCCCHHHHHHHHHHHHH-CCC--eEEEeCCCC
Confidence 56999999 45566778888887544444444442 223322 23345677777777754 333 567899999
Q ss_pred HHHHH
Q 018555 176 CQDIV 180 (354)
Q Consensus 176 G~~a~ 180 (354)
--+..
T Consensus 330 ~di~a 334 (345)
T PRK14457 330 LDANA 334 (345)
T ss_pred Cchhh
Confidence 76553
No 343
>PRK07831 short chain dehydrogenase; Provisional
Probab=24.58 E-value=3.9e+02 Score=23.28 Aligned_cols=19 Identities=16% Similarity=-0.130 Sum_probs=15.8
Q ss_pred HHHHHHHhhCCcEEEEEcc
Q 018555 114 EPLAIALDKERWSLVQFLM 132 (354)
Q Consensus 114 ~~la~~La~~g~~Via~D~ 132 (354)
..+++.|.++|++|+..|.
T Consensus 32 ~~ia~~l~~~G~~V~~~~~ 50 (262)
T PRK07831 32 SATARRALEEGARVVISDI 50 (262)
T ss_pred HHHHHHHHHcCCEEEEEeC
Confidence 5578888888999998876
No 344
>PRK10115 protease 2; Provisional
Probab=24.49 E-value=1.6e+02 Score=30.56 Aligned_cols=73 Identities=15% Similarity=0.068 Sum_probs=40.2
Q ss_pred EEEecCCCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcE----EEEEcccccCCCCCCC-CccCcHHHHHHHHHHHHh
Q 018555 86 VAFKTGDYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWS----LVQFLMTSSYTGYGTS-SLQQDAMEIDQLISYLIN 160 (354)
Q Consensus 86 ~~~~~~~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~----Via~D~R~~~~G~G~S-~~~~~~~dl~~~i~~l~~ 160 (354)
+++.....-|+|+++||..|.......-..++..|.++|.. ++..|.. .|||.. ......++++....+|..
T Consensus 598 ~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~---~GHg~~~~r~~~~~~~A~~~aFl~~ 674 (686)
T PRK10115 598 YDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMD---SGHGGKSGRFKSYEGVAMEYAFLIA 674 (686)
T ss_pred hhccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCC---CCCCCCcCHHHHHHHHHHHHHHHHH
Confidence 33333345677899999886432222234567777765653 3334443 588743 333445555555555554
Q ss_pred h
Q 018555 161 K 161 (354)
Q Consensus 161 ~ 161 (354)
.
T Consensus 675 ~ 675 (686)
T PRK10115 675 L 675 (686)
T ss_pred H
Confidence 3
No 345
>PRK05854 short chain dehydrogenase; Provisional
Probab=24.25 E-value=5.4e+02 Score=23.35 Aligned_cols=75 Identities=13% Similarity=0.005 Sum_probs=39.7
Q ss_pred HHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhhCCCCcEEEEEEChhHHHHHHHHHh-ccccccc
Q 018555 114 EPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRA-NAACSRA 192 (354)
Q Consensus 114 ~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~ 192 (354)
..+++.|+++|++|+..+.+ .+...++++.+.+..+..++.++--.+.-.-.+.-+.. -.....+
T Consensus 28 ~~~a~~La~~G~~Vil~~R~--------------~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~~ 93 (313)
T PRK05854 28 LGLARRLAAAGAEVILPVRN--------------RAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGRP 93 (313)
T ss_pred HHHHHHHHHCCCEEEEEeCC--------------HHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence 45788888889999988652 12333444444433222345555555555444333222 0011125
Q ss_pred ccEEEEeccc
Q 018555 193 VRAAIFQAPV 202 (354)
Q Consensus 193 v~~lIl~~p~ 202 (354)
++.||..+..
T Consensus 94 iD~li~nAG~ 103 (313)
T PRK05854 94 IHLLINNAGV 103 (313)
T ss_pred ccEEEECCcc
Confidence 7777765543
No 346
>cd02040 NifH NifH gene encodes component II (iron protein) of nitrogenase. Nitrogenase is responsible for the biological nitrogen fixation, i.e. reduction of molecular nitrogen to ammonia. NifH consists of two oxygen-sensitive metallosulfur proteins: the mollybdenum-iron (alternatively, vanadium-iron or iron-iron) protein (commonly referred to as component 1), and the iron protein (commonly referred to as component 2). The iron protein is a homodimer, with an Fe4S4 cluster bound between the subunits and two ATP-binding domains. It supplies energy by ATP hydrolysis, and transfers electrons from reduced ferredoxin or flavodoxin to component 1 for the reduction of molecular nitrogen to ammonia.
Probab=24.22 E-value=1.3e+02 Score=26.70 Aligned_cols=34 Identities=15% Similarity=0.086 Sum_probs=25.1
Q ss_pred EEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcc
Q 018555 97 VIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLM 132 (354)
Q Consensus 97 vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~ 132 (354)
|.+. |-| |.+-+..-..++..|+++|++|+.+|+
T Consensus 4 iav~-~KG-GvGKTT~~~nLA~~La~~G~kVlliD~ 37 (270)
T cd02040 4 IAIY-GKG-GIGKSTTTQNLSAALAEMGKKVMIVGC 37 (270)
T ss_pred EEEE-eCC-cCCHHHHHHHHHHHHHhCCCeEEEEEc
Confidence 4444 533 434555567789999999999999999
No 347
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=24.21 E-value=2e+02 Score=24.20 Aligned_cols=62 Identities=8% Similarity=0.026 Sum_probs=32.5
Q ss_pred CcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCC--ccCcHHHHHHHHHH
Q 018555 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSS--LQQDAMEIDQLISY 157 (354)
Q Consensus 94 ~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~--~~~~~~dl~~~i~~ 157 (354)
+.+||+..-+...........+....|.+.|+.|+-+...- ..+|... .....+|+.+.+..
T Consensus 113 ~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~vi~p~~g~--la~~~~g~g~~~~~~~i~~~v~~ 176 (182)
T PRK07313 113 TTPKLIAPAMNTKMYENPATQRNLKTLKEDGVQEIEPKEGL--LACGDEGYGALADIETILETIEN 176 (182)
T ss_pred CCCEEEEECCCHHHhcCHHHHHHHHHHHHCCCEEECCCCCc--cccCCccCCCCCCHHHHHHHHHH
Confidence 34555555422111233445667788888899999887510 1113322 33445566555544
No 348
>PHA02518 ParA-like protein; Provisional
Probab=24.01 E-value=1.3e+02 Score=25.30 Aligned_cols=27 Identities=19% Similarity=0.060 Sum_probs=21.3
Q ss_pred CCCccccHHHHHHHHhhCCcEEEEEcc
Q 018555 106 GFFATEYLEPLAIALDKERWSLVQFLM 132 (354)
Q Consensus 106 ~~~~~~~~~~la~~La~~g~~Via~D~ 132 (354)
|.+-+..-..++..|+++|++|+.+|+
T Consensus 11 GvGKTT~a~~la~~la~~g~~vlliD~ 37 (211)
T PHA02518 11 GAGKTTVATNLASWLHADGHKVLLVDL 37 (211)
T ss_pred CCCHHHHHHHHHHHHHhCCCeEEEEeC
Confidence 334455556788999999999999999
No 349
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=23.89 E-value=1.2e+02 Score=26.62 Aligned_cols=36 Identities=17% Similarity=0.201 Sum_probs=23.2
Q ss_pred CcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEccc
Q 018555 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMT 133 (354)
Q Consensus 94 ~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R 133 (354)
.+..|+|-|-..| ..-..++..|+++||.|++--.|
T Consensus 6 ~~k~VlItgcs~G----GIG~ala~ef~~~G~~V~AtaR~ 41 (289)
T KOG1209|consen 6 QPKKVLITGCSSG----GIGYALAKEFARNGYLVYATARR 41 (289)
T ss_pred CCCeEEEeecCCc----chhHHHHHHHHhCCeEEEEEccc
Confidence 4455555553321 12245899999999999998654
No 350
>cd02034 CooC The accessory protein CooC, which contains a nucleotide-binding domain (P-loop) near the N-terminus, participates in the maturation of the nickel center of carbon monoxide dehydrogenase (CODH). CODH from Rhodospirillum rubrum catalyzes the reversible oxidation of CO to CO2. CODH contains a nickel-iron-sulfur cluster (C-center) and an iron-sulfur cluster (B-center). CO oxidation occurs at the C-center. Three accessory proteins encoded by cooCTJ genes are involved in nickel incorporation into a nickel site. CooC functions as a nickel insertase that mobilizes nickel to apoCODH using energy released from ATP hydrolysis. CooC is a homodimer and has NTPase activities. Mutation at the P-loop abolishs its function.
Probab=23.42 E-value=2.1e+02 Score=21.97 Aligned_cols=24 Identities=17% Similarity=0.021 Sum_probs=18.6
Q ss_pred ccccHHHHHHHHhhCCcEEEEEcc
Q 018555 109 ATEYLEPLAIALDKERWSLVQFLM 132 (354)
Q Consensus 109 ~~~~~~~la~~La~~g~~Via~D~ 132 (354)
.+..-..++..|+++|++|+.+|.
T Consensus 12 KTt~a~~la~~l~~~g~~V~~id~ 35 (116)
T cd02034 12 KTTIAALLARYLAEKGKPVLAIDA 35 (116)
T ss_pred HHHHHHHHHHHHHHCCCcEEEEEC
Confidence 334456678888888999999998
No 351
>TIGR01969 minD_arch cell division ATPase MinD, archaeal. This model represents the archaeal branch of the MinD family. MinD, a weak ATPase, works in bacteria with MinC as a generalized cell division inhibitor and, through interaction with MinE, prevents septum placement inappropriate sites. Often several members of this family are found in archaeal genomes, and the function is uncharacterized. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. The exact roles of the various archaeal MinD homologs are unknown.
Probab=23.36 E-value=1.1e+02 Score=26.69 Aligned_cols=27 Identities=22% Similarity=0.110 Sum_probs=21.4
Q ss_pred CCCccccHHHHHHHHhhCCcEEEEEcc
Q 018555 106 GFFATEYLEPLAIALDKERWSLVQFLM 132 (354)
Q Consensus 106 ~~~~~~~~~~la~~La~~g~~Via~D~ 132 (354)
|.+.+..-..++..|++.|++|+.+|+
T Consensus 11 GvGKTt~a~~LA~~la~~g~~VlliD~ 37 (251)
T TIGR01969 11 GTGKTTITANLGVALAKLGKKVLALDA 37 (251)
T ss_pred CCcHHHHHHHHHHHHHHCCCeEEEEeC
Confidence 334555556789999999999999998
No 352
>cd02037 MRP-like MRP (Multiple Resistance and pH adaptation) is a homologue of the Fer4_NifH superfamily. Like the other members of the superfamily, MRP contains a ATP-binding domain at the N-termini. It is found in bacteria as a membrane-spanning protein and functions as a Na+/H+ antiporter.
Probab=23.11 E-value=1e+02 Score=25.23 Aligned_cols=27 Identities=22% Similarity=0.132 Sum_probs=21.0
Q ss_pred CCCccccHHHHHHHHhhCCcEEEEEcc
Q 018555 106 GFFATEYLEPLAIALDKERWSLVQFLM 132 (354)
Q Consensus 106 ~~~~~~~~~~la~~La~~g~~Via~D~ 132 (354)
|.+.+..-..++..|++.|++|+.+|.
T Consensus 10 G~GKTt~a~~LA~~la~~g~~vllvD~ 36 (169)
T cd02037 10 GVGKSTVAVNLALALAKLGYKVGLLDA 36 (169)
T ss_pred cCChhHHHHHHHHHHHHcCCcEEEEeC
Confidence 334444457789999989999999998
No 353
>TIGR00253 RNA_bind_YhbY putative RNA-binding protein, YhbY family. A combination of crystal structure, molecular modeling, and bioinformatic data together suggest that members of this family, including YhbY of E. coli, are RNA binding proteins.
Probab=22.67 E-value=3.3e+02 Score=20.27 Aligned_cols=63 Identities=14% Similarity=0.315 Sum_probs=40.1
Q ss_pred CcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhhCCCCcEEEEEE
Q 018555 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLGH 172 (354)
Q Consensus 94 ~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~~~~~~~~LvGh 172 (354)
-.++|.++--| .+......+-+.|.. ..++-+-.. ....+|..++++.+.+..+.+-+-++||
T Consensus 16 l~p~v~IGK~G---lt~~vi~ei~~aL~~--hELIKVkvl-----------~~~~~~~~e~a~~i~~~~~a~~Vq~iG~ 78 (95)
T TIGR00253 16 LKPVVLVGKNG---LTEGVIKEIEQALEH--RELIKVKVA-----------TEDREDKTLIAEALVKETGACNVQVIGK 78 (95)
T ss_pred CCCeEEECCCC---CCHHHHHHHHHHHHh--CCcEEEEec-----------CCChhHHHHHHHHHHHHHCCEEEEEEcc
Confidence 35688888766 566677888888875 455555441 1223466677777777666666666665
No 354
>cd00952 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2'-carboxybenzalpyruvate hydratase-aldolase (CBPHA). HBPHA catalyzes HBP to salicyaldehyde and pyruvate. This reaction is part of the degradative pathways for naphthalene and naphthalenesulfonates by bacteria. CBPHA is homologous to HBPHA and catalyzes the cleavage of CBP to 2-carboxylbenzaldehyde and pyruvate during the degradation of phenanthrene. They are member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=22.55 E-value=6e+02 Score=23.27 Aligned_cols=88 Identities=11% Similarity=0.103 Sum_probs=54.3
Q ss_pred CccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhhCCCCcEEEEEEC-hhHHHHHHHHHhc
Q 018555 108 FATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLGHS-TGCQDIVHYMRAN 186 (354)
Q Consensus 108 ~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~~~~~~~~LvGhS-~GG~~a~~~a~~p 186 (354)
-+...++.+++.|.++|.+=+.+-- ..|.. ..-..++-.++++...+..+.+-.+++|-+ .+-.-+++++..
T Consensus 26 iD~~~l~~lv~~li~~Gv~Gi~v~G-----stGE~-~~Lt~eEr~~v~~~~~~~~~grvpvi~Gv~~~~t~~ai~~a~~- 98 (309)
T cd00952 26 VDLDETARLVERLIAAGVDGILTMG-----TFGEC-ATLTWEEKQAFVATVVETVAGRVPVFVGATTLNTRDTIARTRA- 98 (309)
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECc-----ccccc-hhCCHHHHHHHHHHHHHHhCCCCCEEEEeccCCHHHHHHHHHH-
Confidence 4666678888998878887777632 22332 122234555555555543333445667775 577788888776
Q ss_pred ccccccccEEEEecccC
Q 018555 187 AACSRAVRAAIFQAPVS 203 (354)
Q Consensus 187 ~~~~~~v~~lIl~~p~~ 203 (354)
....-+++++++.|..
T Consensus 99 -A~~~Gad~vlv~~P~y 114 (309)
T cd00952 99 -LLDLGADGTMLGRPMW 114 (309)
T ss_pred -HHHhCCCEEEECCCcC
Confidence 2223789999888854
No 355
>cd00408 DHDPS-like Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stablilzes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.
Probab=22.38 E-value=5.6e+02 Score=22.83 Aligned_cols=90 Identities=13% Similarity=0.116 Sum_probs=52.3
Q ss_pred CccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhhCCCCcEEEEEEChhHH-HHHHHHHhc
Q 018555 108 FATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLGHSTGCQ-DIVHYMRAN 186 (354)
Q Consensus 108 ~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~~~~~~~~LvGhS~GG~-~a~~~a~~p 186 (354)
-+..-.+.+++.|.+.|.+-+.+-- .-|.. ..-..++-.++++...+..+.+-.+++|-+-... -++.++..
T Consensus 15 iD~~~~~~~i~~l~~~Gv~gi~~~G-----stGE~-~~ls~~Er~~l~~~~~~~~~~~~~vi~gv~~~~~~~~i~~a~~- 87 (281)
T cd00408 15 VDLDALRRLVEFLIEAGVDGLVVLG-----TTGEA-PTLTDEERKEVIEAVVEAVAGRVPVIAGVGANSTREAIELARH- 87 (281)
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECC-----CCccc-ccCCHHHHHHHHHHHHHHhCCCCeEEEecCCccHHHHHHHHHH-
Confidence 4566678888888888988877632 11221 2223455666666666544333345566554333 35666655
Q ss_pred ccccccccEEEEecccCch
Q 018555 187 AACSRAVRAAIFQAPVSDR 205 (354)
Q Consensus 187 ~~~~~~v~~lIl~~p~~~~ 205 (354)
.....++++++..|....
T Consensus 88 -a~~~Gad~v~v~pP~y~~ 105 (281)
T cd00408 88 -AEEAGADGVLVVPPYYNK 105 (281)
T ss_pred -HHHcCCCEEEECCCcCCC
Confidence 222378999988876543
No 356
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=22.31 E-value=3.7e+02 Score=24.29 Aligned_cols=36 Identities=19% Similarity=0.118 Sum_probs=25.3
Q ss_pred EEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcc
Q 018555 96 QVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLM 132 (354)
Q Consensus 96 ~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~ 132 (354)
.+++++|++.| +.......+++.|.+.|+.|..+..
T Consensus 2 il~~~~~~~~g-G~~~~~~~l~~~L~~~g~~v~v~~~ 37 (360)
T cd04951 2 ILYVITGLGLG-GAEKQVVDLADQFVAKGHQVAIISL 37 (360)
T ss_pred eEEEecCCCCC-CHHHHHHHHHHhcccCCceEEEEEE
Confidence 45566665432 3455567899999988999988865
No 357
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=22.26 E-value=1.2e+02 Score=26.32 Aligned_cols=16 Identities=6% Similarity=0.131 Sum_probs=13.5
Q ss_pred HHHHhhCCcEEEEEcc
Q 018555 117 AIALDKERWSLVQFLM 132 (354)
Q Consensus 117 a~~La~~g~~Via~D~ 132 (354)
+..|+++||.|+++|.
T Consensus 52 a~~LA~~G~~V~avD~ 67 (218)
T PRK13255 52 MLWLAEQGHEVLGVEL 67 (218)
T ss_pred HHHHHhCCCeEEEEcc
Confidence 4566678999999999
No 358
>KOG4127 consensus Renal dipeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=22.20 E-value=2.6e+02 Score=26.45 Aligned_cols=73 Identities=12% Similarity=0.121 Sum_probs=48.0
Q ss_pred CCcEEEEECCCCCCCCcccc--HHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhhCCCCcEEE
Q 018555 93 YQQQVIFIGGLTDGFFATEY--LEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVL 169 (354)
Q Consensus 93 ~~p~vIliHG~~~~~~~~~~--~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~~~~~~~~L 169 (354)
.+.+|||.|--.-+.++..- -+.+.+.|++.| -|+.+.+- +++=..+....+.|+.+.|+++++..|++.|-|
T Consensus 265 S~APVIFSHSsA~~vcns~rNVPDdVL~llk~Ng-GvVMVnfy---~~~isc~~~A~v~~v~~Hi~hIr~VaG~~hIGl 339 (419)
T KOG4127|consen 265 SRAPVIFSHSSAYSVCNSSRNVPDDVLQLLKENG-GVVMVNFY---PGFISCSDRATVSDVADHINHIRAVAGIDHIGL 339 (419)
T ss_pred hcCceEeecccHHHHhcCccCCcHHHHHHHhhcC-CEEEEEee---cccccCCCcccHHHHHHHHHHHHHhhccceeec
Confidence 46799999985543333322 477888998754 56666652 344333344458899999999998777655544
No 359
>TIGR01496 DHPS dihydropteroate synthase. This model represents dihydropteroate synthase, the enzyme that catalyzes the second to last step in folic acid biosynthesis. The gene is usually designated folP (folic acid biosynthsis) or sul (sulfanilamide resistance). This model represents one branch of the family of pterin-binding enzymes (pfam00809) and of a cluster of dihydropteroate synthase and related enzymes (COG0294). Other members of pfam00809 and COG0294 are represented by TIGR00284.
Probab=22.19 E-value=2.9e+02 Score=24.64 Aligned_cols=54 Identities=19% Similarity=0.210 Sum_probs=26.6
Q ss_pred HHHHHHHHhhCCc--EEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhhCCCCcEEEEEECh
Q 018555 113 LEPLAIALDKERW--SLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLGHST 174 (354)
Q Consensus 113 ~~~la~~La~~g~--~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~~~~~~~~LvGhS~ 174 (354)
++...+.+.+.|. .=+.+|.. .|++.+ .+...++-..++.+++ ....+++|.|-
T Consensus 150 ~~~~i~~~~~~Gi~~~~iilDPg---~gf~ks--~~~~~~~l~~i~~l~~---~~~p~l~G~Sr 205 (257)
T TIGR01496 150 LEARAEELVAAGVAAERIILDPG---IGFGKT--PEHNLELLKHLEEFVA---LGYPLLVGASR 205 (257)
T ss_pred HHHHHHHHHHcCCCHHHEEEECC---CCcccC--HHHHHHHHHHHHHHHh---CCCcEEEEecc
Confidence 4455555666677 34556651 244432 2222233333444443 23567888863
No 360
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=22.04 E-value=1.1e+02 Score=26.66 Aligned_cols=31 Identities=10% Similarity=0.052 Sum_probs=22.0
Q ss_pred CcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcc
Q 018555 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLM 132 (354)
Q Consensus 94 ~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~ 132 (354)
.+.=||+.|=| .+. -+..|+++||.|+.+|+
T Consensus 37 ~~~rvLvPgCG---~g~-----D~~~La~~G~~VvGvDl 67 (218)
T PF05724_consen 37 PGGRVLVPGCG---KGY-----DMLWLAEQGHDVVGVDL 67 (218)
T ss_dssp TSEEEEETTTT---TSC-----HHHHHHHTTEEEEEEES
T ss_pred CCCeEEEeCCC---ChH-----HHHHHHHCCCeEEEEec
Confidence 34457778866 222 24567778999999999
No 361
>cd03413 CbiK_C Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), C-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases, and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=21.89 E-value=3e+02 Score=20.66 Aligned_cols=27 Identities=19% Similarity=0.188 Sum_probs=16.7
Q ss_pred EEEEECCCCCCCCccccHHHHHHHHhhCC
Q 018555 96 QVIFIGGLTDGFFATEYLEPLAIALDKER 124 (354)
Q Consensus 96 ~vIliHG~~~~~~~~~~~~~la~~La~~g 124 (354)
.||+-||-... ....+..++..+.+.+
T Consensus 3 illvgHGSr~~--~~~~~~~l~~~l~~~~ 29 (103)
T cd03413 3 VVFMGHGTDHP--SNAVYAALEYVLREED 29 (103)
T ss_pred EEEEECCCCch--hhhHHHHHHHHHHhcC
Confidence 45666886632 2455777888886544
No 362
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=21.88 E-value=4.8e+02 Score=25.44 Aligned_cols=71 Identities=17% Similarity=0.154 Sum_probs=46.3
Q ss_pred HHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhhCCCCcEEEEEEChhHHHHHHHHHh-cccccccccE
Q 018555 117 AIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLGHSTGCQDIVHYMRA-NAACSRAVRA 195 (354)
Q Consensus 117 a~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~-p~~~~~~v~~ 195 (354)
.+.+.+.+|.|+.+|- .|.=. . .+++-+=+..+.+......+.+|--+|=|.-|...|.. .+ ...+.+
T Consensus 175 l~~ak~~~~DvvIvDT----AGRl~--i---de~Lm~El~~Ik~~~~P~E~llVvDam~GQdA~~~A~aF~e--~l~itG 243 (451)
T COG0541 175 LEKAKEEGYDVVIVDT----AGRLH--I---DEELMDELKEIKEVINPDETLLVVDAMIGQDAVNTAKAFNE--ALGITG 243 (451)
T ss_pred HHHHHHcCCCEEEEeC----CCccc--c---cHHHHHHHHHHHhhcCCCeEEEEEecccchHHHHHHHHHhh--hcCCce
Confidence 3445556788888887 33211 1 22333333344445567889999999999999999987 33 236889
Q ss_pred EEE
Q 018555 196 AIF 198 (354)
Q Consensus 196 lIl 198 (354)
+|+
T Consensus 244 vIl 246 (451)
T COG0541 244 VIL 246 (451)
T ss_pred EEE
Confidence 987
No 363
>PRK06398 aldose dehydrogenase; Validated
Probab=21.81 E-value=4.9e+02 Score=22.66 Aligned_cols=48 Identities=17% Similarity=0.313 Sum_probs=27.7
Q ss_pred HHHHHHHhhCCcEEEEEcccccCCCCCCC-Ccc---CcHHHHHHHHHHHHhhCC
Q 018555 114 EPLAIALDKERWSLVQFLMTSSYTGYGTS-SLQ---QDAMEIDQLISYLINKDN 163 (354)
Q Consensus 114 ~~la~~La~~g~~Via~D~R~~~~G~G~S-~~~---~~~~dl~~~i~~l~~~~~ 163 (354)
..+++.|.++|++|+..+.... ..... ... .+.+++.++++.+.++.+
T Consensus 20 ~~ia~~l~~~G~~Vi~~~r~~~--~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~ 71 (258)
T PRK06398 20 KAVVNRLKEEGSNVINFDIKEP--SYNDVDYFKVDVSNKEQVIKGIDYVISKYG 71 (258)
T ss_pred HHHHHHHHHCCCeEEEEeCCcc--ccCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 5688899888999999886310 00000 011 123566677777665443
No 364
>COG1540 Uncharacterized proteins, homologs of lactam utilization protein B [General function prediction only]
Probab=21.78 E-value=75 Score=27.94 Aligned_cols=32 Identities=22% Similarity=0.323 Sum_probs=25.0
Q ss_pred EEEECCCCCCCCccccHHHHHHHHhhCCcEEEEE
Q 018555 97 VIFIGGLTDGFFATEYLEPLAIALDKERWSLVQF 130 (354)
Q Consensus 97 vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~ 130 (354)
=||+|| ++.....+-+.+-..|.++|..|.++
T Consensus 220 siCvHG--D~p~Al~~~~riR~~l~~~gi~v~~~ 251 (252)
T COG1540 220 SICVHG--DNPHALAFARRIRAALEAEGIKVAAL 251 (252)
T ss_pred eEEEcC--CCHHHHHHHHHHHHHHHHcCCeeecC
Confidence 589999 55566667788888898889888754
No 365
>COG1534 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein [Translation, ribosomal structure and biogenesis]
Probab=21.68 E-value=3.5e+02 Score=20.26 Aligned_cols=63 Identities=17% Similarity=0.295 Sum_probs=41.8
Q ss_pred CcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhhCCCCcEEEEEE
Q 018555 94 QQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLGH 172 (354)
Q Consensus 94 ~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~~~~~~~~LvGh 172 (354)
-.++|.++-.| .+......+-+.|.+ ..+|-+-. .....+|-.++.+.|.+..+.+-+-++|+
T Consensus 17 l~piv~IGk~G---lte~vi~Ei~~aL~~--reLIKVkv-----------l~~~~edr~eia~~l~~~~~a~lVqviG~ 79 (97)
T COG1534 17 LKPIVQIGKNG---LTEGVIKEIDRALEA--RELIKVKV-----------LQNAREDKKEIAEALAEETGAELVQVIGK 79 (97)
T ss_pred CCceEEecCCc---cCHHHHHHHHHHHHh--CCcEEEEe-----------eccchhhHHHHHHHHHHHhCCEEeeeeee
Confidence 35788887766 666777888888876 45555555 22233467777777777666666767765
No 366
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=21.52 E-value=2.6e+02 Score=24.92 Aligned_cols=33 Identities=27% Similarity=0.219 Sum_probs=27.0
Q ss_pred EEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEccc
Q 018555 96 QVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMT 133 (354)
Q Consensus 96 ~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R 133 (354)
.|++|-|-+.| .=+..++.|+++|+.|+....|
T Consensus 7 kv~lITGASSG-----iG~A~A~~l~~~G~~vvl~aRR 39 (246)
T COG4221 7 KVALITGASSG-----IGEATARALAEAGAKVVLAARR 39 (246)
T ss_pred cEEEEecCcch-----HHHHHHHHHHHCCCeEEEEecc
Confidence 58889886644 3467899999999999999886
No 367
>TIGR01968 minD_bact septum site-determining protein MinD. This model describes the bacterial and chloroplast form of MinD, a multifunctional cell division protein that guides correct placement of the septum. The homologous archaeal MinD proteins, with many archaeal genomes having two or more forms, are described by a separate model.
Probab=21.31 E-value=1.3e+02 Score=26.37 Aligned_cols=36 Identities=25% Similarity=0.108 Sum_probs=25.1
Q ss_pred EEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcc
Q 018555 97 VIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLM 132 (354)
Q Consensus 97 vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~ 132 (354)
||.+-+.-+|.+.+..-..++..|++.|++|+.+|+
T Consensus 3 ii~v~s~kGGvGKTt~a~~lA~~la~~g~~vlliD~ 38 (261)
T TIGR01968 3 VIVITSGKGGVGKTTTTANLGTALARLGKKVVLIDA 38 (261)
T ss_pred EEEEecCCCCccHHHHHHHHHHHHHHcCCeEEEEEC
Confidence 344433333444555567789999989999999998
No 368
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=21.27 E-value=1.6e+02 Score=24.19 Aligned_cols=32 Identities=16% Similarity=0.096 Sum_probs=23.3
Q ss_pred HHHHHHHhhCCCCcEEEEEEChhHHHHHHHHHh
Q 018555 153 QLISYLINKDNSEGVVLLGHSTGCQDIVHYMRA 185 (354)
Q Consensus 153 ~~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~ 185 (354)
.+++.|.+ .+...-++.|-|.|+.+|..++..
T Consensus 17 Gvl~~L~~-~~~~~d~i~GtSaGal~a~~~a~g 48 (175)
T cd07205 17 GVLKALEE-AGIPIDIVSGTSAGAIVGALYAAG 48 (175)
T ss_pred HHHHHHHH-cCCCeeEEEEECHHHHHHHHHHcC
Confidence 34555543 244566899999999999998865
No 369
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=21.22 E-value=1.6e+02 Score=24.28 Aligned_cols=31 Identities=19% Similarity=0.194 Sum_probs=23.4
Q ss_pred HHHHHHhhCCCCcEEEEEEChhHHHHHHHHHh
Q 018555 154 LISYLINKDNSEGVVLLGHSTGCQDIVHYMRA 185 (354)
Q Consensus 154 ~i~~l~~~~~~~~~~LvGhS~GG~~a~~~a~~ 185 (354)
+++.|.+ .+...-.+.|-|.|+.++..++..
T Consensus 18 vl~~L~e-~g~~~d~i~GtSaGAi~aa~~a~g 48 (175)
T cd07228 18 VLRALEE-EGIEIDIIAGSSIGALVGALYAAG 48 (175)
T ss_pred HHHHHHH-CCCCeeEEEEeCHHHHHHHHHHcC
Confidence 4455543 345667899999999999998876
No 370
>PRK06523 short chain dehydrogenase; Provisional
Probab=21.14 E-value=4.9e+02 Score=22.48 Aligned_cols=20 Identities=10% Similarity=-0.069 Sum_probs=16.6
Q ss_pred HHHHHHHhhCCcEEEEEccc
Q 018555 114 EPLAIALDKERWSLVQFLMT 133 (354)
Q Consensus 114 ~~la~~La~~g~~Via~D~R 133 (354)
..+++.|+++|++|+..+.+
T Consensus 23 ~~ia~~l~~~G~~v~~~~r~ 42 (260)
T PRK06523 23 AATVARLLEAGARVVTTARS 42 (260)
T ss_pred HHHHHHHHHCCCEEEEEeCC
Confidence 45888888889999999863
No 371
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=20.86 E-value=3.1e+02 Score=22.47 Aligned_cols=57 Identities=19% Similarity=0.267 Sum_probs=38.2
Q ss_pred HHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhhCCCCcEEEEEEChhHHHHHHH
Q 018555 115 PLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLGHSTGCQDIVHY 182 (354)
Q Consensus 115 ~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~~~~~~~~LvGhS~GG~~a~~~ 182 (354)
.+...+.+ |-.|++.|.| | .....+++++.++.+.. .|..=.+++|-|.|=--++.-
T Consensus 59 ~il~~i~~-~~~vi~Ld~~----G-----k~~sSe~fA~~l~~~~~-~G~~i~f~IGG~~Gl~~~~~~ 115 (155)
T COG1576 59 AILAAIPK-GSYVVLLDIR----G-----KALSSEEFADFLERLRD-DGRDISFLIGGADGLSEAVKA 115 (155)
T ss_pred HHHHhcCC-CCeEEEEecC----C-----CcCChHHHHHHHHHHHh-cCCeEEEEEeCcccCCHHHHH
Confidence 44455554 7899999994 4 33445778888887764 343456889999986655544
No 372
>PRK10824 glutaredoxin-4; Provisional
Probab=20.67 E-value=4e+02 Score=20.54 Aligned_cols=80 Identities=14% Similarity=0.034 Sum_probs=46.8
Q ss_pred CCCcEEEEECCCCCCCCccccHHHHHHHHhhCCcEEEEEcccccCCCCCCCCccCcHHHHHHHHHHHHhhCCCCcEEEEE
Q 018555 92 DYQQQVIFIGGLTDGFFATEYLEPLAIALDKERWSLVQFLMTSSYTGYGTSSLQQDAMEIDQLISYLINKDNSEGVVLLG 171 (354)
Q Consensus 92 ~~~p~vIliHG~~~~~~~~~~~~~la~~La~~g~~Via~D~R~~~~G~G~S~~~~~~~dl~~~i~~l~~~~~~~~~~LvG 171 (354)
...++|||.-|......+. |=....+.|.+.|.....+|. .. + .++...+..+....-..+|++=|
T Consensus 13 ~~~~Vvvf~Kg~~~~p~Cp-yc~~ak~lL~~~~i~~~~idi----~~--------d-~~~~~~l~~~sg~~TVPQIFI~G 78 (115)
T PRK10824 13 AENPILLYMKGSPKLPSCG-FSAQAVQALSACGERFAYVDI----LQ--------N-PDIRAELPKYANWPTFPQLWVDG 78 (115)
T ss_pred hcCCEEEEECCCCCCCCCc-hHHHHHHHHHHcCCCceEEEe----cC--------C-HHHHHHHHHHhCCCCCCeEEECC
Confidence 4578999999854322222 224455666666644444565 11 1 23444444443333457889999
Q ss_pred EChhHHHHHHHHHh
Q 018555 172 HSTGCQDIVHYMRA 185 (354)
Q Consensus 172 hS~GG~~a~~~a~~ 185 (354)
...||.--+.-+.+
T Consensus 79 ~~IGG~ddl~~l~~ 92 (115)
T PRK10824 79 ELVGGCDIVIEMYQ 92 (115)
T ss_pred EEEcChHHHHHHHH
Confidence 99999977666554
No 373
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=20.17 E-value=1.2e+02 Score=27.66 Aligned_cols=50 Identities=12% Similarity=-0.004 Sum_probs=29.8
Q ss_pred CCcEEEEEcccccCCCC-CCCCccCcHHHHHHHHHHHHhhCCCC---c-EEEEEEChhHHHHHHHHH
Q 018555 123 ERWSLVQFLMTSSYTGY-GTSSLQQDAMEIDQLISYLINKDNSE---G-VVLLGHSTGCQDIVHYMR 184 (354)
Q Consensus 123 ~g~~Via~D~R~~~~G~-G~S~~~~~~~dl~~~i~~l~~~~~~~---~-~~LvGhS~GG~~a~~~a~ 184 (354)
++++++++|= .|- |.. -..+++.|.++.+.. . =.+.|-|.||.+|+.++.
T Consensus 6 ~~~riLsLdG----GGirG~~--------~~~vL~~Le~~~~~~i~~~fDli~GTStGgiiA~~la~ 60 (308)
T cd07211 6 RGIRILSIDG----GGTRGVV--------ALEILRKIEKLTGKPIHELFDYICGVSTGAILAFLLGL 60 (308)
T ss_pred CCcEEEEECC----ChHHHHH--------HHHHHHHHHHHhCCCchhhcCEEEecChhHHHHHHHhc
Confidence 5788888876 331 221 122333443332221 1 258899999999999875
No 374
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=20.04 E-value=1.7e+02 Score=29.01 Aligned_cols=105 Identities=17% Similarity=0.269 Sum_probs=57.1
Q ss_pred EEEEECC--CCCCCCccccHHHHHHHHhh-CCcEEEEEcccccCCCC----CCCCccCc--HHHHHHHHHHHHhh-----
Q 018555 96 QVIFIGG--LTDGFFATEYLEPLAIALDK-ERWSLVQFLMTSSYTGY----GTSSLQQD--AMEIDQLISYLINK----- 161 (354)
Q Consensus 96 ~vIliHG--~~~~~~~~~~~~~la~~La~-~g~~Via~D~R~~~~G~----G~S~~~~~--~~dl~~~i~~l~~~----- 161 (354)
++|.|=| |..|..+...++ .+.|+. ..--|+.+++|-..-|| |....+.. .-|-+-+++|+.+.
T Consensus 137 VlVWiyGGGF~sGt~SLdvYd--Gk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmGl~DQqLAl~WV~~Ni~aFG 214 (601)
T KOG4389|consen 137 VLVWIYGGGFYSGTPSLDVYD--GKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMGLLDQQLALQWVQENIAAFG 214 (601)
T ss_pred EEEEEEcCccccCCcceeeec--cceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccchHHHHHHHHHHHHhHHHhC
Confidence 5555544 332322333343 345553 34556677777322222 34444433 34555567777662
Q ss_pred CCCCcEEEEEEChhHHHHHHHHHhcccccccccEEEEecccC
Q 018555 162 DNSEGVVLLGHSTGCQDIVHYMRANAACSRAVRAAIFQAPVS 203 (354)
Q Consensus 162 ~~~~~~~LvGhS~GG~~a~~~a~~p~~~~~~v~~lIl~~p~~ 203 (354)
-+..++.|+|.|.|+.-+..-+..| .....++..|+.+...
T Consensus 215 Gnp~~vTLFGESAGaASv~aHLlsP-~S~glF~raIlQSGS~ 255 (601)
T KOG4389|consen 215 GNPSRVTLFGESAGAASVVAHLLSP-GSRGLFHRAILQSGSL 255 (601)
T ss_pred CCcceEEEeccccchhhhhheecCC-CchhhHHHHHhhcCCC
Confidence 2467899999999997554333333 1222678888876544
Done!