BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018556
(354 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B0SQQ4|SYH_LEPBP Histidine--tRNA ligase OS=Leptospira biflexa serovar Patoc (strain
Patoc 1 / ATCC 23582 / Paris) GN=hisS PE=3 SV=1
Length = 437
Score = 196 bits (497), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 115/286 (40%), Positives = 164/286 (57%), Gaps = 18/286 (6%)
Query: 69 QKIDVNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEI 128
QK+ KGTRDF PEDMRLRN+LF ++V R +G+EE D P++ES L+ K GEEI
Sbjct: 4 QKLTTENYKGTRDFYPEDMRLRNYLFSVMKDVVRSYGYEEYDGPMVESLDLYRAKTGEEI 63
Query: 129 -RDQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRR 187
Q+Y F D+G+R VA+RPE+TP++AR+V +K + + P++WF++ WRYE+ GR
Sbjct: 64 VGKQIYNFIDKGDREVAIRPEMTPTVARMVAKKLRELPRPIRWFSIPNLWRYEQPGHGRL 123
Query: 188 REHYQWNMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVL------ 241
REH+Q N+D+ GV + AE E++S G + IS R +L E L
Sbjct: 124 REHWQLNVDMFGVTSSRAELEILSLACDILFAFGAPKNSFKVTISHRSLLDEFLLDGLKV 183
Query: 242 ---RCHSIPEHLFGKVCIIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKSLTEL 298
+ H + + L K I D+ L I ND S+ +S+ +L ++ SL ++
Sbjct: 184 SPNQAHEVSKILDKKNKITQDEYVALVTKTIPND--SSAVSKI---DLFLNATVNSLNQI 238
Query: 299 EG---EAVADLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFE 341
G E +A +K LF + G SD I FD SVVRG YYTG +FE
Sbjct: 239 PGIKEETLAAIKGLFEDIKTIGLSDIIHFDPSVVRGFDYYTGFIFE 284
>sp|B0SH39|SYH_LEPBA Histidine--tRNA ligase OS=Leptospira biflexa serovar Patoc (strain
Patoc 1 / Ames) GN=hisS PE=3 SV=1
Length = 437
Score = 196 bits (497), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 115/286 (40%), Positives = 164/286 (57%), Gaps = 18/286 (6%)
Query: 69 QKIDVNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEI 128
QK+ KGTRDF PEDMRLRN+LF ++V R +G+EE D P++ES L+ K GEEI
Sbjct: 4 QKLTTENYKGTRDFYPEDMRLRNYLFSVMKDVVRSYGYEEYDGPMVESLDLYRAKTGEEI 63
Query: 129 -RDQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRR 187
Q+Y F D+G+R VA+RPE+TP++AR+V +K + + P++WF++ WRYE+ GR
Sbjct: 64 VGKQIYNFIDKGDREVAIRPEMTPTVARMVAKKLRELPRPIRWFSIPNLWRYEQPGHGRL 123
Query: 188 REHYQWNMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVL------ 241
REH+Q N+D+ GV + AE E++S G + IS R +L E L
Sbjct: 124 REHWQLNVDMFGVTSSRAELEILSLACDILFAFGAPKNSFKVTISHRSLLDEFLLDGLKV 183
Query: 242 ---RCHSIPEHLFGKVCIIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKSLTEL 298
+ H + + L K I D+ L I ND S+ +S+ +L ++ SL ++
Sbjct: 184 SPNQAHEVSKILDKKNKITQDEYVALVTKTIPND--SSAVSKI---DLFLNATVNSLNQI 238
Query: 299 EG---EAVADLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFE 341
G E +A +K LF + G SD I FD SVVRG YYTG +FE
Sbjct: 239 PGIKEETLAAIKGLFEDIKTIGLSDIIHFDPSVVRGFDYYTGFIFE 284
>sp|Q5UXW4|SYH_HALMA Histidine--tRNA ligase OS=Haloarcula marismortui (strain ATCC 43049
/ DSM 3752 / JCM 8966 / VKM B-1809) GN=hisS PE=3 SV=1
Length = 435
Score = 187 bits (475), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 102/279 (36%), Positives = 159/279 (56%), Gaps = 19/279 (6%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KG RDF P++M+ R W ++V++ +GF E+ P LE +++ K+GEEI ++LY FE
Sbjct: 6 KGFRDFYPKEMQARRWAMDTLEDVAQRYGFREIGTPALEPTEMYVDKSGEEIVEELYSFE 65
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+G R+VAL PELTP++AR+ + K + +S P+KW + WRYE +GR RE YQ N+D
Sbjct: 66 DKGGRKVALTPELTPTVARMFVAKQQELSKPIKWVSTRPFWRYEEPQQGRFREFYQTNVD 125
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCH----SIPEHLFG 252
I G TA+AE+++ + +G+T D R+S R +L VL +PE +
Sbjct: 126 IFGSAEPTADAEILAVAVDMLTDLGLTGEDFEIRVSHRDILSGVLESFEADVDVPEAIRA 185
Query: 253 KVCIIIDKIEKLPLDVIKNDLKSAGMSEA---AIEELLRVLS--IKSLTELEGE-----A 302
+DK K+ D + L AG+S +E+L++ + I++L +L G A
Sbjct: 186 -----VDKRAKVDHDEYLDALAEAGLSYGQADTFDEMLQIDAEEIETLGDLTGSEDVRTA 240
Query: 303 VADLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFE 341
+L+ + AE FG + + + RGL YYTG+VFE
Sbjct: 241 TDNLQAVLDAAEDFGVREHLTVSLTTARGLDYYTGVVFE 279
>sp|Q04X87|SYH_LEPBL Histidine--tRNA ligase OS=Leptospira borgpetersenii serovar
Hardjo-bovis (strain L550) GN=hisS PE=3 SV=1
Length = 439
Score = 185 bits (470), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 103/275 (37%), Positives = 161/275 (58%), Gaps = 8/275 (2%)
Query: 75 PPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRD-QLY 133
P KGTRDF PE+MRLRNW+F +E FG+EE D P+LES L+ K+GEEI + QLY
Sbjct: 12 PYKGTRDFYPEEMRLRNWMFSIMRETVLSFGYEEYDGPILESFDLYKAKSGEEIVERQLY 71
Query: 134 CFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQW 193
F D+G RRVA+RPE+TP+LAR+V +++ P++WF++ WRYE+ +GR REH+Q
Sbjct: 72 DFIDKGERRVAIRPEMTPTLARMVAGNLRNLPRPVRWFSIPNLWRYEQPGKGRLREHWQL 131
Query: 194 NMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCH-SIPEHLFG 252
N+D+ GV AE E++ + K+ G ++S RK+L L+ + +H
Sbjct: 132 NVDLFGVDTHRAELEILLMADSILKKFGAPTGSYQIKVSHRKLLDSFLKNSLKLSDHQVH 191
Query: 253 KVCIIIDKIEKLPLDV----IKNDLKSAGMSEAAIEELL--RVLSIKSLTELEGEAVADL 306
V ++DK K+ + IK L + + IE L + ++ ++ ++ +++ +
Sbjct: 192 GVSKLLDKKSKISPETFEAEIKPLLNNFNEQFSLIETYLASNLETVSTIPGIDPDSIHFI 251
Query: 307 KLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFE 341
+ LF + G + FD S++RG YYTG +FE
Sbjct: 252 RNLFQELGELGIDKQLVFDPSIIRGFDYYTGCIFE 286
>sp|Q04WC4|SYH_LEPBJ Histidine--tRNA ligase OS=Leptospira borgpetersenii serovar
Hardjo-bovis (strain JB197) GN=hisS PE=3 SV=1
Length = 439
Score = 185 bits (470), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 103/275 (37%), Positives = 161/275 (58%), Gaps = 8/275 (2%)
Query: 75 PPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRD-QLY 133
P KGTRDF PE+MRLRNW+F +E FG+EE D P+LES L+ K+GEEI + QLY
Sbjct: 12 PYKGTRDFYPEEMRLRNWMFSIMRETVLSFGYEEYDGPILESFDLYKAKSGEEIVERQLY 71
Query: 134 CFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQW 193
F D+G RRVA+RPE+TP+LAR+V +++ P++WF++ WRYE+ +GR REH+Q
Sbjct: 72 DFIDKGERRVAIRPEMTPTLARMVAGNLRNLPRPVRWFSIPNLWRYEQPGKGRLREHWQL 131
Query: 194 NMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCH-SIPEHLFG 252
N+D+ GV AE E++ + K+ G ++S RK+L L+ + +H
Sbjct: 132 NVDLFGVDTHRAELEILLMADSILKKFGAPTGSYQIKVSHRKLLDSFLKNSLKLSDHQVH 191
Query: 253 KVCIIIDKIEKLPLDV----IKNDLKSAGMSEAAIEELL--RVLSIKSLTELEGEAVADL 306
V ++DK K+ + IK L + + IE L + ++ ++ ++ +++ +
Sbjct: 192 GVSKLLDKKSKISPETFEAEIKPLLNNFNEQFSLIETYLASNLETVSTIPGIDPDSIHFI 251
Query: 307 KLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFE 341
+ LF + G + FD S++RG YYTG +FE
Sbjct: 252 RNLFQELGELGIDKQLVFDPSIIRGFDYYTGCIFE 286
>sp|P62371|SYH_LEPIC Histidine--tRNA ligase OS=Leptospira interrogans serogroup
Icterohaemorrhagiae serovar copenhageni (strain Fiocruz
L1-130) GN=hisS PE=3 SV=1
Length = 439
Score = 182 bits (462), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/275 (37%), Positives = 160/275 (58%), Gaps = 8/275 (2%)
Query: 75 PPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRD-QLY 133
P KGTRDF PEDMRLRNW+F +E FG+EE D P+LES L+ K+GEEI + QLY
Sbjct: 12 PYKGTRDFYPEDMRLRNWMFSVMRETVLSFGYEEYDGPILESFDLYKAKSGEEIVERQLY 71
Query: 134 CFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQW 193
F D+G RRVA+RPE+TP+LAR+V +++ P++WF++ WRYE+ +GR REH+Q
Sbjct: 72 DFIDKGERRVAIRPEMTPTLARMVAGNLRNLPKPVRWFSIPNLWRYEQPGKGRLREHWQL 131
Query: 194 NMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCH-SIPEHLFG 252
N+D+ GV + AE E++ + K+ G ++S RK+L L+ +
Sbjct: 132 NVDLFGVDSHRAELEILLIADSILKKFGAPIGSYQIKVSHRKLLDSFLKNSLKLNGDQVH 191
Query: 253 KVCIIIDKIEKLPLDVIKNDLK----SAGMSEAAIEELL--RVLSIKSLTELEGEAVADL 306
V ++DK K+ + + ++K + + IE L + ++ + ++ +V+ +
Sbjct: 192 GVSKLLDKKSKISSEAFETEMKPFLNNFKEQFSLIETYLNSNLETVSKIPGIDTNSVSFI 251
Query: 307 KLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFE 341
+ LF + G + FD S++RG YYTG +FE
Sbjct: 252 QNLFQELGELGIDKQLLFDPSIIRGFDYYTGCIFE 286
>sp|Q8F9Y3|SYH_LEPIN Histidine--tRNA ligase OS=Leptospira interrogans serogroup
Icterohaemorrhagiae serovar Lai (strain 56601) GN=hisS
PE=3 SV=1
Length = 439
Score = 182 bits (462), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/275 (37%), Positives = 160/275 (58%), Gaps = 8/275 (2%)
Query: 75 PPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRD-QLY 133
P KGTRDF PEDMRLRNW+F +E FG+EE D P+LES L+ K+GEEI + QLY
Sbjct: 12 PYKGTRDFYPEDMRLRNWMFSVMRETVLSFGYEEYDGPILESFDLYKAKSGEEIVERQLY 71
Query: 134 CFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQW 193
F D+G RRVA+RPE+TP+LAR+V +++ P++WF++ WRYE+ +GR REH+Q
Sbjct: 72 DFIDKGERRVAIRPEMTPTLARMVAGNLRNLPKPVRWFSIPNLWRYEQPGKGRLREHWQL 131
Query: 194 NMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCH-SIPEHLFG 252
N+D+ GV + AE E++ + K+ G ++S RK+L L+ +
Sbjct: 132 NVDLFGVDSHRAELEILLIADSILKKFGAPIGSYQIKVSHRKLLDSFLKNSLKLNGDQVH 191
Query: 253 KVCIIIDKIEKLPLDVIKNDLK----SAGMSEAAIEELL--RVLSIKSLTELEGEAVADL 306
V ++DK K+ + + ++K + + IE L + ++ + ++ +V+ +
Sbjct: 192 GVSKLLDKKSKISPEAFETEMKPFLNNFKEQFSLIETYLNSNLETVSKIPGIDTNSVSFI 251
Query: 307 KLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFE 341
+ LF + G + FD S++RG YYTG +FE
Sbjct: 252 QNLFQELGELGIDKQLLFDPSIIRGFDYYTGCIFE 286
>sp|B1ZUW6|SYH_OPITP Histidine--tRNA ligase OS=Opitutus terrae (strain DSM 11246 /
PB90-1) GN=hisS PE=3 SV=1
Length = 437
Score = 179 bits (453), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 105/276 (38%), Positives = 152/276 (55%), Gaps = 12/276 (4%)
Query: 78 GTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFED 137
G R+F P+ + RN +F +++ + FGF E D PVLE L+ K+G+EI QL+ F D
Sbjct: 9 GFREFYPDALARRNHIFRLWRQTAVAFGFAEYDAPVLEPLELYKTKSGDEIEAQLFSFTD 68
Query: 138 RGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMDI 197
+G R VALRPE+TP++ R+V K ++ P+KWF++ + +RYER +GR R +Q+N D+
Sbjct: 69 KGGREVALRPEMTPTVCRMVGAKANALKRPIKWFSIAEYYRYERAQKGRERAFFQFNADL 128
Query: 198 IGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCII 257
P AE ELI+ + K G+T D R+S R + L + E V
Sbjct: 129 FAEPGPEAEIELIALLTQCLKAFGLTEQDFYIRLSDRNLWFFYLEALGLDEPRIRAVLSA 188
Query: 258 IDKIEKLPLDVIKNDLKSAGMSEAAIEE-LLRVLSIKSLTELE-------GEAVA----D 305
+DK EK+ D K + G + A+++ +L L IK+L LE GE +A D
Sbjct: 189 VDKFEKVGDDAFKPYAEQFGPLDLALKQRVLEFLQIKTLASLEQTLAPLGGEKLAARLGD 248
Query: 306 LKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFE 341
+ L G S +I+ D VVRGLAYYTG VFE
Sbjct: 249 WRKLLDGLAAMGLSPFIEVDLGVVRGLAYYTGFVFE 284
>sp|Q9HLX5|SYH_THEAC Histidine--tRNA ligase OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=hisS PE=1 SV=1
Length = 426
Score = 177 bits (448), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/284 (36%), Positives = 162/284 (57%), Gaps = 18/284 (6%)
Query: 68 LQKIDVNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEE 127
+ ++ + +G RDF PEDM + ++F +E + FGF +DFP LE L+ K+GEE
Sbjct: 1 MYRLQIEKIRGFRDFYPEDMDVEKFIFKTAEEAAEAFGFRRIDFPSLEYLDLYRIKSGEE 60
Query: 128 IRDQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRR 187
+ Q Y F D+G R V L PE TPS R+V + K + PL+W++ + WRYE GR
Sbjct: 61 LLQQTYSFVDKGGREVTLIPEATPSTVRMVTSR-KDLQRPLRWYSFPKVWRYEEPQAGRY 119
Query: 188 REHYQWNMDIIGVPAVTAEAELISSIITFFKRIGITASDV-GFRISSRKVLQEVL--RCH 244
REHYQ+N DI G + A+AE+I+ + R+G+ D+ RI+SRK+++E++
Sbjct: 120 REHYQFNADIFGSDSPEADAEVIALASSILDRLGL--QDIYEIRINSRKIMEEIIGGMTS 177
Query: 245 SIPEHLFGKVCIIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLS----IKSLTELEG 300
S P +F IID+ K+ + + L+SAG+ E + + + S I + + G
Sbjct: 178 SDPFSVFS----IIDRYHKISREEFVDQLRSAGIGEDGVSMIADLCSGTRGIDEMARITG 233
Query: 301 ---EAVADLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFE 341
E +A + + L +G + +++D S+VRGL+YYTGIVFE
Sbjct: 234 KSSEEIARMAAVEDLLASYGVKN-VRYDFSIVRGLSYYTGIVFE 276
>sp|Q3IMP5|SYH_NATPD Histidine--tRNA ligase OS=Natronomonas pharaonis (strain DSM 2160 /
ATCC 35678) GN=hisS PE=3 SV=1
Length = 432
Score = 174 bits (442), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 97/273 (35%), Positives = 151/273 (55%), Gaps = 9/273 (3%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KG R+F P +M R + + +R +GF EV P LE L++ K+GEEI ++LY FE
Sbjct: 6 KGFREFYPGEMSARREVTDTIETRARRYGFREVGTPALERTQLYVDKSGEEIVEELYAFE 65
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+G R V+L PELTP++AR+V+ K ++++ P+KWF+ WRYE++ +GR RE YQ N+D
Sbjct: 66 DKGGREVSLTPELTPTVARMVVAKQQALAKPVKWFSTRPFWRYEQVQQGRFREFYQTNID 125
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCI 256
I G A+AE++++ +G+ +D FR+S R +L +L +
Sbjct: 126 IFGSERPEADAEVLATAADALTDLGLDGADFEFRVSHRDILGGLLAAMDSDVDTTDAIR- 184
Query: 257 IIDKIEKLPLDVIKNDLKSAGMSEA---AIEELLRVLSIKSLTELEGE-----AVADLKL 308
+DK EK+ + ++ L AG++ + LLR + L E G AV +L+
Sbjct: 185 AVDKREKIDDEEYRSLLVGAGLTHEEADTFDSLLRTDDLSELVEFAGTDRVEAAVENLQA 244
Query: 309 LFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFE 341
+ A FG ++ RGL YYTG+VFE
Sbjct: 245 VLDAAADFGVREFCSVSLETARGLDYYTGVVFE 277
>sp|O58028|SYH_PYRHO Histidine--tRNA ligase OS=Pyrococcus horikoshii (strain ATCC 700860
/ DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=hisS
PE=3 SV=1
Length = 431
Score = 174 bits (440), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/279 (36%), Positives = 152/279 (54%), Gaps = 17/279 (6%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KGTRDF PEDM R W+F +EV +GF+E+ PV+E LF ++GEE+ QLY F+
Sbjct: 6 KGTRDFLPEDMAKRRWVFEKIREVFEAYGFKEILTPVMEYTKLFQLRSGEEVVKQLYAFK 65
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+G R V+LRP++T S+ARL + + P+KW+ + +RYE GR RE +Q ++
Sbjct: 66 DKGGRDVSLRPDMTSSVARLYVNSFQMAPKPIKWYYIANMFRYEEPQSGRYREFWQAGVE 125
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCI 256
+IG V A+AE+I+ + + G+ D I R +L E + + + +
Sbjct: 126 LIGSDKVEADAEVIALFVESYLSTGL--RDFTVNIGDRILLDEFAGMLGVSDDI--GLMR 181
Query: 257 IIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKS-------------LTELEGEAV 303
IIDK +KL + N LK G+ E+ IE++L ++ IK ++ E +
Sbjct: 182 IIDKRDKLSQEEFINLLKEFGLGESEIEKVLELVEIKGRPDNVLPLAEELFKSKKAKEEI 241
Query: 304 ADLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFEG 342
+ L L L E +G DWI+ D + RG YYT IVFE
Sbjct: 242 SKLYKLTDLLEWYGVKDWIRIDLGIARGFDYYTSIVFEA 280
>sp|Q8U431|SYH_PYRFU Histidine--tRNA ligase OS=Pyrococcus furiosus (strain ATCC 43587 /
DSM 3638 / JCM 8422 / Vc1) GN=hisS PE=3 SV=1
Length = 432
Score = 170 bits (431), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/279 (35%), Positives = 151/279 (54%), Gaps = 17/279 (6%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KGTRDF PE+M R W+F +E +GF+EV P +E LF ++GEE+ QLY F+
Sbjct: 6 KGTRDFLPEEMVKRRWVFERIRERFETYGFKEVLTPTMEYTKLFELRSGEEVVKQLYAFK 65
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+G R V+LRP++T S+ARL + ++ P+KW+ + +RYE GR RE +Q ++
Sbjct: 66 DKGGRDVSLRPDMTSSVARLYVNMFQTAPKPIKWYYIANMFRYEEPQSGRYREFWQAGVE 125
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCI 256
+IG V A+AE+I+ + + G+ V I R +L E + + + + +
Sbjct: 126 LIGSDKVEADAEVIALFVESYLATGLREFTVN--IGDRILLDEFAKMLGVKDDI--GLMR 181
Query: 257 IIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKS-------------LTELEGEAV 303
IIDK +KLP + N LK G+ + IE++L +++IK +E+ +
Sbjct: 182 IIDKKDKLPQEDFINALKEFGLDKNGIEKVLELINIKGKPDEVLPLAEELFTSEVAKNEI 241
Query: 304 ADLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFEG 342
L L L E + DWI+ D + RG YYT IVFE
Sbjct: 242 NRLYALIDLLEAYEVKDWIRIDLGIARGFDYYTSIVFEA 280
>sp|Q97CE6|SYH_THEVO Histidine--tRNA ligase OS=Thermoplasma volcanium (strain ATCC 51530
/ DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) GN=hisS PE=3
SV=1
Length = 426
Score = 169 bits (428), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/274 (35%), Positives = 155/274 (56%), Gaps = 14/274 (5%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KG RDF PEDM + ++F V+ +GF+ +DFP LE L+ K+GEE+ +Q Y F
Sbjct: 7 KGFRDFYPEDMEIEKFIFETASSVAESYGFKRIDFPSLEYIDLYRIKSGEELLNQTYSFT 66
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
DRG R V L PE TPS R++ + K ++ P++W++ + WRYE GR REHYQ+N D
Sbjct: 67 DRGGREVTLIPEATPSTVRMLTSR-KDIAKPVRWYSFPKVWRYEEPQAGRFREHYQFNAD 125
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCI 256
I G A+AE+IS +G++ + R++SR +++++L I + V
Sbjct: 126 IFGPSNEEADAEIISLASGILDGLGLSGA-YEIRVNSRIMMEDILNGMGIADPY--TVFS 182
Query: 257 IIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKS----LTELEG-----EAVADLK 307
I+D+ K+ + +DL S G+SE + R+ S S ++ L G +A L
Sbjct: 183 IVDRFHKVSKETFVDDLMSVGLSEENSNTIYRMCSEASEPGGISGLFGSGKVSKAAERLI 242
Query: 308 LLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFE 341
+ +++G +++D S+VRGL+YYTG+VFE
Sbjct: 243 RTIDILKEYGVKS-VKYDFSIVRGLSYYTGLVFE 275
>sp|Q9UY31|SYH_PYRAB Histidine--tRNA ligase OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=hisS PE=3 SV=1
Length = 431
Score = 168 bits (425), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 97/279 (34%), Positives = 149/279 (53%), Gaps = 17/279 (6%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KGTRDF PE+M R W+F +EV +GF+EV PV+E LF ++GEE+ QLY F+
Sbjct: 6 KGTRDFLPEEMVKRRWVFEKIREVFETYGFKEVLTPVMEYTKLFQLRSGEEVVKQLYAFK 65
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+G R VALRP++T S+ARL + ++ P+KW+ + +RYE GR RE +Q ++
Sbjct: 66 DKGGRDVALRPDMTSSVARLYVNSFQTAPKPIKWYYIANMFRYEEPQSGRYREFWQAGVE 125
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCI 256
+IG + A+AE+I+ + + G+ D I R +L E + + + + +
Sbjct: 126 LIGSDKIEADAEVIALFVDSYLSTGL--KDFTVNIGDRVLLDEFAKMLGVKDDI--GLMR 181
Query: 257 IIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKS-------------LTELEGEAV 303
IIDK +KL + L G+ E IE++L ++ IK +E E +
Sbjct: 182 IIDKKDKLSQEEFLKALGEFGLDENGIEKVLNLIEIKGKPDDVLPLAEELFTSERAKEEI 241
Query: 304 ADLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFEG 342
+ L L + + +WIQ D + RG YYT IVFE
Sbjct: 242 SRLYNLVDILSWYEVDEWIQIDLGIARGFDYYTSIVFEA 280
>sp|Q18DQ2|SYH_HALWD Histidine--tRNA ligase OS=Haloquadratum walsbyi (strain DSM 16790)
GN=hisS PE=3 SV=1
Length = 434
Score = 168 bits (425), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 145/274 (52%), Gaps = 9/274 (3%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KG RDF P +M R + + + +GF EV P LE +++ K+GE I ++LY F
Sbjct: 6 KGFRDFYPPEMTARRQVIDILETTATQYGFREVGTPTLEQTQMYVDKSGEGIEEELYAFS 65
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D G R V L PELTP++AR+V+ K +++S P+KW + WRYE++ +GR RE YQ N+D
Sbjct: 66 DDGGRDVTLIPELTPTVARMVVDKQQALSKPIKWVSTRPFWRYEQVQQGRFREFYQTNVD 125
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCI 256
I G A+AE+++ + +G+TASD FR+S R +L +L + +
Sbjct: 126 IFGTADPIADAEILAFAADALRNLGLTASDFEFRVSHRDILSGLLASITNDDADIDTRAA 185
Query: 257 I--IDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKSLTELE-------GEAVADLK 307
I +DK K+ L AG+S + +L+ L E+ AV +L+
Sbjct: 186 IRAVDKRAKIEQAEYHGLLTDAGLSYDQAQSFDDLLTTADLDEIATVGNDIVTTAVQNLR 245
Query: 308 LLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFE 341
+ + + G ++ + RGL YYTG+VFE
Sbjct: 246 SVLAAVDDLGVGEFCDISLTTARGLDYYTGVVFE 279
>sp|B9LRS2|SYH_HALLT Histidine--tRNA ligase OS=Halorubrum lacusprofundi (strain ATCC
49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=hisS PE=3 SV=1
Length = 442
Score = 166 bits (421), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/278 (34%), Positives = 157/278 (56%), Gaps = 13/278 (4%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KG RDF P + R + ++ + +GF E+ P LE +++ K+GEEI ++LY FE
Sbjct: 6 KGFRDFYPGEQSARREVTDAIEDAASRYGFREIATPALERTEMYVDKSGEEIVEELYAFE 65
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+G R V++ PELTP++AR+V+ KG+ +S P+KW + WRYE++ +GR RE YQ N+D
Sbjct: 66 DKGGRGVSMTPELTPTVARMVVAKGQELSKPIKWMSTRPFWRYEQVQQGRFREFYQTNID 125
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRC-HSIPEHLFGKVC 255
+ G A A+AE+++ +G+T D FR+S R +L ++R + P+ + K
Sbjct: 126 VFGSSAPEADAEVLAVAADALTDLGLTNDDFEFRVSHRDILGGLVRALAADPDAVDTKAA 185
Query: 256 I-IIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLS-------IKSLTELEGE----AV 303
I +DK K+ L AG+ A +E ++S + ++ E GE AV
Sbjct: 186 IRAVDKRAKVDDGEYLGLLSDAGLDRATAQEFDDLISDVETVDDLDAVAEAGGEDVEAAV 245
Query: 304 ADLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFE 341
+L+ + + A+ FG + + + RGL YYTG+VFE
Sbjct: 246 ENLRNVLAAADDFGAGAFCEVSLTTARGLDYYTGVVFE 283
>sp|Q5JIM2|SYH_PYRKO Histidine--tRNA ligase OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=hisS PE=3 SV=1
Length = 436
Score = 165 bits (417), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 92/279 (32%), Positives = 153/279 (54%), Gaps = 17/279 (6%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KGTRD PE+M R W+F +EV F F+EV P E LF ++GEE+ QLY F+
Sbjct: 8 KGTRDLLPEEMAKRRWVFERIREVFEGFNFQEVLTPTFEYTELFKLRSGEEVVKQLYAFQ 67
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+G R ++LRP++T S+ARL + + ++ P+KW+ + +RYE GR RE +Q ++
Sbjct: 68 DKGGRDISLRPDMTSSVARLYVNRFQNAPKPIKWYYIANMFRYEEPQSGRYREFWQAGVE 127
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCI 256
+IG V A+AE+I+ + +G+ D I R +L E + + + + +
Sbjct: 128 LIGSDRVEADAEVIALFTQSYLAVGL--EDFTVNIGDRILLDEFAKMLGVEDDI--GLMR 183
Query: 257 IIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKSLTE----------LEGEAVADL 306
+IDK +K+ + L+ G+++ +E++L ++ IK L + EA A++
Sbjct: 184 LIDKKDKMSREEFVGALREFGLNDDGVEKVLSLIEIKGLPDEVLPKAEELFTSEEAKAEI 243
Query: 307 KLLFSLA---EKFGYSDWIQFDASVVRGLAYYTGIVFEG 342
K L+ L + +G S W++ D + RG YYT +VFE
Sbjct: 244 KRLYELVDLLDAYGVSKWVRIDLGIARGFDYYTSVVFEA 282
>sp|Q9HNP5|SYH_HALSA Histidine--tRNA ligase OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=hisS PE=3 SV=1
Length = 432
Score = 159 bits (402), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 147/273 (53%), Gaps = 9/273 (3%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KG RDF P +M R ++ + +GF EV P +E +++ K+G EI D+LY F
Sbjct: 6 KGFRDFYPAEMGPRRAAIDAIEDAAASYGFREVGTPAMERTEMYVDKSGAEIVDELYSFT 65
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+G R VAL PELTP++AR+V+ K +++S P+KW++ WRYE +GR RE YQ N+D
Sbjct: 66 DQGGRDVALTPELTPTVARMVVAKQQALSKPIKWYSSRPFWRYEEPQQGRFREFYQTNLD 125
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCI 256
I G A+AE+++ +G+T +D FR+S R +L +L +
Sbjct: 126 IFGTSDPRADAEVLAVAADGLTSLGLTGADFEFRVSHRDILGGLLAAFDATVDTEAAIR- 184
Query: 257 IIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIK--------SLTELEGEAVADLKL 308
+DK EK+ +DL +AG+S E+ +L + T+ +AVA+L+
Sbjct: 185 TVDKREKIERAAYLDDLAAAGLSYDQAEQFDDLLDGDDLDALVSFAGTDRVRDAVANLRN 244
Query: 309 LFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFE 341
+ AE G + + RGL YYTG+VFE
Sbjct: 245 VLDAAETLGVRQYCDVSLTTARGLDYYTGVVFE 277
>sp|B0R6V2|SYH_HALS3 Histidine--tRNA ligase OS=Halobacterium salinarum (strain ATCC
29341 / DSM 671 / R1) GN=hisS PE=3 SV=1
Length = 432
Score = 159 bits (402), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 147/273 (53%), Gaps = 9/273 (3%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KG RDF P +M R ++ + +GF EV P +E +++ K+G EI D+LY F
Sbjct: 6 KGFRDFYPAEMGPRRAAIDAIEDAAASYGFREVGTPAMERTEMYVDKSGAEIVDELYSFT 65
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+G R VAL PELTP++AR+V+ K +++S P+KW++ WRYE +GR RE YQ N+D
Sbjct: 66 DQGGRDVALTPELTPTVARMVVAKQQALSKPIKWYSSRPFWRYEEPQQGRFREFYQTNLD 125
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCI 256
I G A+AE+++ +G+T +D FR+S R +L +L +
Sbjct: 126 IFGTSDPRADAEVLAVAADGLTSLGLTGADFEFRVSHRDILGGLLAAFDATVDTEAAIR- 184
Query: 257 IIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIK--------SLTELEGEAVADLKL 308
+DK EK+ +DL +AG+S E+ +L + T+ +AVA+L+
Sbjct: 185 TVDKREKIERAAYLDDLAAAGLSYDQAEQFDDLLDGDDLDALVSFAGTDRVRDAVANLRN 244
Query: 309 LFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFE 341
+ AE G + + RGL YYTG+VFE
Sbjct: 245 VLDAAETLGVRQYCDVSLTTARGLDYYTGVVFE 277
>sp|Q6L1Q5|SYH_PICTO Histidine--tRNA ligase OS=Picrophilus torridus (strain ATCC 700027
/ DSM 9790 / JCM 10055 / NBRC 100828) GN=hisS PE=3 SV=1
Length = 423
Score = 153 bits (387), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/285 (34%), Positives = 149/285 (52%), Gaps = 19/285 (6%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KG RD P+DM +R + + FG++ +DFP LES L+ K+G E+ +Q + F
Sbjct: 7 KGFRDHYPDDMEIRYDFIKKMMDTAISFGYKMIDFPSLESMDLYRLKSGTELVEQTFSFT 66
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+G R V + PE TPS R++ + K + +P +WF++ + WRYE GR REH Q+N D
Sbjct: 67 DKGGREVTMIPEATPSTMRMLTSR-KDIKMPARWFSIPKVWRYEEPQEGRYREHIQFNAD 125
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLR--CHSIPEHLFGKV 254
+ G + A+AE+I T +G++ ++ R +++ +LR + P LF
Sbjct: 126 MFGADSPEADAEIIGLAATILDNLGLSGQ-YEINVNDRYLMELILRDLGSNNPVDLFP-- 182
Query: 255 CIIIDKIEKLPL-DVIKNDLK--SAGMSEAAIEELLRVLSIKSLTELEG-------EAVA 304
+ID+ +K+ L D K LK SE I L+ + I + L E V
Sbjct: 183 --VIDRFKKMDLTDFKKRLLKDLDDDASEKLISLLMNRIDINDVERLLNGYANDVMERVK 240
Query: 305 DLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFEGRKVESNL 349
LK F+L K+ S + D SVVRGL+YYTGIVFE + L
Sbjct: 241 RLKDTFALTSKYTKSK-LNIDLSVVRGLSYYTGIVFEAFDISGEL 284
>sp|B8GDZ3|SYH_METPE Histidine--tRNA ligase OS=Methanosphaerula palustris (strain ATCC
BAA-1556 / DSM 19958 / E1-9c) GN=hisS PE=3 SV=1
Length = 409
Score = 149 bits (376), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 153/279 (54%), Gaps = 24/279 (8%)
Query: 73 VNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQL 132
V P+GTRDF P++M R + +E R +G+ EV P+ E +LF ++G+ I D++
Sbjct: 2 VQRPRGTRDFLPDEMEARRMIEGRMREAVRRWGYREVATPIFEDLSLFTMRSGQGIIDEM 61
Query: 133 YCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQ 192
Y F+D+G R +ALRPELT ++ R+ + + + ++ PL+W C+RYER +GR R+ +Q
Sbjct: 62 YVFQDKGGRDLALRPELTAAVLRMYVNEARVLAKPLRWCYFADCFRYERPQKGRYRQFWQ 121
Query: 193 WNMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFG 252
+ +++IG A+AE+I + G+ D +I +++ +L + E +
Sbjct: 122 FGVELIGADTAAADAEVILVADNAIRSSGL---DYDLKIGHLGLMKHLL--ADVGEEVRR 176
Query: 253 KVCIIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKSLTEL---------EGEAV 303
KV +DK E D +K+ L++AG++ A + L R+L+ ++L E EG
Sbjct: 177 KVMAYLDKKE---FDGLKDYLETAGLA-ALTDPLTRLLAAETLDEAFAVTGPLPEEGRIR 232
Query: 304 ADLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFEG 342
LL + ++ Y + + RGL YYTG+VFEG
Sbjct: 233 EMAALLDATGVRYSY------NFGIARGLDYYTGMVFEG 265
>sp|A6LIF7|SYH_PARD8 Histidine--tRNA ligase OS=Parabacteroides distasonis (strain ATCC
8503 / DSM 20701 / NCTC 11152) GN=hisS PE=3 SV=1
Length = 451
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 155/314 (49%), Gaps = 40/314 (12%)
Query: 76 PKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLY-- 133
PKGTRDF PE+M RN++F+ +EV L+GF++++ P +E+ + + K GEE L+
Sbjct: 7 PKGTRDFSPEEMAKRNYIFNTIREVFHLYGFQQIETPAMENLSTLMGKYGEEGDKLLFKI 66
Query: 134 -----CFEDRGNRRV---------------ALRPELTPSLARLVIQKGKSVSLPLKWFAV 173
CF + + LR +LT AR V+Q +S P K + +
Sbjct: 67 LNSGDCFAGISDEELMEKNPLRFAAKACEKGLRYDLTVPFARYVVQHRNEISFPFKRYQI 126
Query: 174 GQCWRYERMTRGRRREHYQWNMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISS 233
WR +R +GR RE YQ + D++G ++ E ELI + F R GI V ++++
Sbjct: 127 QPVWRADRPQKGRYREFYQCDGDVVGSDSLINEVELIQIMDEVFHRFGIR---VCIKMNN 183
Query: 234 RKVLQEVLRCHSIPEHLFGKVCIIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIK 293
RK+L + + + + + IDK++K+ LD + +L+S G+ E AIE L ++ ++
Sbjct: 184 RKILSGIAEIIGEADKIV-DITVAIDKLDKIGLDNVNEELRSKGLPEEAIERLQPIIMLQ 242
Query: 294 --------------SLTELEGEAVADLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIV 339
S +E + VA+L + ++ D ++ RGL YYTG +
Sbjct: 243 GSNQEKIATLKKVLSASETGLKGVAELDFILERISHTSIRAELELDLTLARGLNYYTGAI 302
Query: 340 FEGRKVESNLWGWT 353
FE + ++ + T
Sbjct: 303 FEVKALDVQIGSIT 316
>sp|Q8TV61|SYH_METKA Histidine--tRNA ligase OS=Methanopyrus kandleri (strain AV19 / DSM
6324 / JCM 9639 / NBRC 100938) GN=hisS PE=3 SV=1
Length = 421
Score = 146 bits (368), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/278 (34%), Positives = 146/278 (52%), Gaps = 16/278 (5%)
Query: 71 IDVNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRD 130
+ V PKGTRDF PE+MR R WL +V R +G+EEV P E LF K+GEEI +
Sbjct: 6 MKVERPKGTRDFTPEEMRARRWLERYLLDVFRSYGYEEVLTPTFEHAKLFEEKSGEEILE 65
Query: 131 QLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREH 190
++Y F+D+ R++ALRPE+T + R + K+ PLK + C+RYE+ RGR RE
Sbjct: 66 EMYVFKDKKGRKLALRPEMTAPVVRFYNAELKTRPHPLKLAYIVNCFRYEQPQRGRWREF 125
Query: 191 YQWNMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHL 250
+Q +++ G A+ E+I F I + + R+ +L+ +L + I E +
Sbjct: 126 WQAGVEVFGSDRPEADVEVIELTYRIFDGI-LPSGAFEVRVGHLGILRGLLEEYGIGEDV 184
Query: 251 FGKVCIIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKSLTELEGEAVADLKLLF 310
KV ++DK E LD +K L + +A L V++ +S +E+E +
Sbjct: 185 QNKVAHLVDKGE---LDEVKTLLPAEPAEKA-----LAVVTARSESEVEEAVSGKERAER 236
Query: 311 SLAEKFGYSDWI-------QFDASVVRGLAYYTGIVFE 341
+L SD + + D SV RGL YYTG+VFE
Sbjct: 237 ALENLMEISDALREAGVDHELDFSVARGLDYYTGMVFE 274
>sp|O26346|SYH_METTH Histidine--tRNA ligase OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=hisS PE=3 SV=2
Length = 425
Score = 145 bits (365), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 148/281 (52%), Gaps = 13/281 (4%)
Query: 71 IDVNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRD 130
+D++ P+GTRDF +MR R + + +G+ E+ P+ E LF K+GEE+ +
Sbjct: 1 MDISRPRGTRDFLFAEMRNRKEVEGVLRRTFETYGYHEIKTPIFEELKLFTVKSGEEVVN 60
Query: 131 QLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREH 190
Q+Y F D+G R +ALRPELT +ARL + + + P+K + G C+RYER GR R+
Sbjct: 61 QIYHFTDKGGRELALRPELTAPVARLYMNEMQKKPKPIKMYYFGSCFRYERPQAGRFRQF 120
Query: 191 YQWNMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHL 250
+Q+ ++IG + AEAE+IS +G+ +V I +L+ +L IP L
Sbjct: 121 WQFGCELIGGRSPLAEAEVISLASESLHELGLDGFEV--HIGHLGILRGILGREEIPSEL 178
Query: 251 FGKVCIIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLS----IKSLTELEG------ 300
++ +IDK + L+ + +++ +G S + +L+ + + E G
Sbjct: 179 QDRIMGVIDKGDVEELEALLGEVEVSGESRELLMKLIGTQGGPEVLDDVEEYLGGYSESL 238
Query: 301 EAVADLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFE 341
EA+ + + L FG D+ + + RGL YYTGIVFE
Sbjct: 239 EALEEFRELVETLHYFGVDDY-HVNLGIARGLDYYTGIVFE 278
>sp|Q64QS2|SYH_BACFR Histidine--tRNA ligase OS=Bacteroides fragilis (strain YCH46)
GN=hisS PE=3 SV=1
Length = 454
Score = 144 bits (364), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 157/314 (50%), Gaps = 40/314 (12%)
Query: 76 PKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCF 135
PKGTRDF P +M RN++F+ ++V L+GF++++ P +E + + K GEE L+
Sbjct: 8 PKGTRDFSPVEMAKRNYIFNTIRDVYHLYGFQQIETPSMEMLSTLMGKYGEEGDKLLFKI 67
Query: 136 EDRGN------------RRVA----------LRPELTPSLARLVIQKGKSVSLPLKWFAV 173
++ G+ R A LR +LT AR V+ ++ P K + +
Sbjct: 68 QNSGDYFSGITDEELLSRNAAKLASKFCEKGLRYDLTVPFARYVVMHRDEITFPFKRYQI 127
Query: 174 GQCWRYERMTRGRRREHYQWNMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISS 233
WR +R +GR RE YQ + D++G ++ E EL+ + T F R GI V +I++
Sbjct: 128 QPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDTVFTRFGIR---VCIKINN 184
Query: 234 RKVLQEVLRCHSIPEHLFGKVCIIIDKIEKLPLDVIKNDLKSAGMSEAAI---------- 283
RK+L + + + + + IDK++K+ LD + +L G+SE AI
Sbjct: 185 RKILTGIAEIIGEADKIV-DITVAIDKLDKIGLDNVNKELAEKGISEEAIAKLQPIILLS 243
Query: 284 ----EELLRVLSIKSLTELEGEAVADLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIV 339
E+L + ++ S +E + V + + + + + G + I+ D ++ RGL YYTG +
Sbjct: 244 GTNTEKLATLKTVLSDSETGLKGVEESEFILNTLQTMGLKNEIELDLTLARGLNYYTGAI 303
Query: 340 FEGRKVESNLWGWT 353
FE + ++ + T
Sbjct: 304 FEVKALDVQIGSIT 317
>sp|Q5LAE0|SYH_BACFN Histidine--tRNA ligase OS=Bacteroides fragilis (strain ATCC 25285 /
NCTC 9343) GN=hisS PE=3 SV=1
Length = 454
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 156/314 (49%), Gaps = 40/314 (12%)
Query: 76 PKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCF 135
PKGTRDF P +M RN++F+ ++V L+GF++++ P +E + + K GEE L+
Sbjct: 8 PKGTRDFSPVEMAKRNYIFNTIRDVYHLYGFQQIETPSMEMLSTLMGKYGEEGDKLLFKI 67
Query: 136 EDRGN------------RRVA----------LRPELTPSLARLVIQKGKSVSLPLKWFAV 173
++ GN R A LR +LT AR V+ ++ P K + +
Sbjct: 68 QNSGNYFSGITDEELLSRNAAKLASKFCEKGLRYDLTVPFARYVVMHRDEITFPFKRYQI 127
Query: 174 GQCWRYERMTRGRRREHYQWNMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISS 233
WR +R +GR RE YQ + D++G ++ E EL+ + T F R GI V +I++
Sbjct: 128 QPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDTVFTRFGIR---VCIKINN 184
Query: 234 RKVLQEVLRCHSIPEHLFGKVCIIIDKIEKLPLDVIKNDLKSAGMSEAAI---------- 283
RK+L + + + + + IDK++K+ LD + +L G+S AI
Sbjct: 185 RKILTGIAEIIGEADKIV-DITVAIDKLDKIGLDNVNKELAEKGISGEAIAKLQPIILLS 243
Query: 284 ----EELLRVLSIKSLTELEGEAVADLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIV 339
E+L + ++ S +E + V + + + + + G + I+ D ++ RGL YYTG +
Sbjct: 244 GTNAEKLATLKTVLSDSETGLKGVEESEFILNTLQTMGLKNEIELDLTLARGLNYYTGAI 303
Query: 340 FEGRKVESNLWGWT 353
FE + ++ + T
Sbjct: 304 FEVKALDVQIGSIT 317
>sp|A2SQI5|SYH_METLZ Histidine--tRNA ligase OS=Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z) GN=hisS PE=3 SV=1
Length = 410
Score = 142 bits (359), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 146/274 (53%), Gaps = 14/274 (5%)
Query: 73 VNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQL 132
+ P+GTRDF P +M R ++ + V+ FG+ E+ P+ E LF K+GE I +++
Sbjct: 2 IQKPRGTRDFLPAEMAQRRFVEQKMRAVAATFGYGEIVTPMFEELELFTIKSGEGIINEM 61
Query: 133 YCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQ 192
Y FED+G R++ LRPE+T ++ R + + + PL+WF +C+RYER +GR R+ +Q
Sbjct: 62 YAFEDKGGRKITLRPEITAAVLRAYVNEAQMAPKPLRWFYFAECFRYERPQKGRYRQFWQ 121
Query: 193 WNMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFG 252
+ ++IG + A+AE+IS + G+ ++ ++ +L P
Sbjct: 122 FGSELIGADSAAADAEVISLAYELLRCTGVRFV---MKVGHLAPMKHLLSGLDAPSQK-- 176
Query: 253 KVCIIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKSLTELEGEAVADLKLLFSL 312
++ ++K +D++ L S S+ E L +++ K+L E+ D+ +
Sbjct: 177 ---QVMAALDKRDMDLLGTTLASLDSSD-LFEPLKGLVTAKTLPEIFA-VTGDIPEKARI 231
Query: 313 AEKFGY--SDWIQFDAS--VVRGLAYYTGIVFEG 342
E FGY + I F+ + + RGL YYTG+VFEG
Sbjct: 232 EETFGYLEAQNIPFEQNFGIARGLDYYTGMVFEG 265
>sp|Q8A6N7|SYH_BACTN Histidine--tRNA ligase OS=Bacteroides thetaiotaomicron (strain ATCC
29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) GN=hisS
PE=3 SV=1
Length = 454
Score = 141 bits (355), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 154/314 (49%), Gaps = 40/314 (12%)
Query: 76 PKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCF 135
PKGTRDF P +M RN++F+ ++V L+GF++++ P +E + + K G+E L+
Sbjct: 8 PKGTRDFSPVEMAKRNYIFNTIRDVYHLYGFQQIETPSMEMLSTLMGKYGDEGDKLLFKI 67
Query: 136 EDRGNR----------------------RVALRPELTPSLARLVIQKGKSVSLPLKWFAV 173
++ G+ LR +LT AR V+ ++ P K + +
Sbjct: 68 QNSGDYFSGITDEELLSRNAVKLASKFCEKGLRYDLTVPFARYVVMHRDEITFPFKRYQI 127
Query: 174 GQCWRYERMTRGRRREHYQWNMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISS 233
WR +R +GR RE YQ + D++G ++ E EL+ + T F R I V +I++
Sbjct: 128 QPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDTVFSRFNIR---VCIKINN 184
Query: 234 RKVLQEVLRCHSIPEHLFGKVCIIIDKIEKLPLDVIKNDLKSAGMSEAAI---------- 283
RK+L + + + + + IDK++K+ L+ + +LK G+S+ AI
Sbjct: 185 RKILSGIAEIIGEADKIV-DITVAIDKLDKIGLENVNAELKEKGISDEAIAKLQPIILLS 243
Query: 284 ----EELLRVLSIKSLTELEGEAVADLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIV 339
E+L + S+ + +E + V + + + E G + I+ D ++ RGL YYTG +
Sbjct: 244 GTNTEKLATLKSVLAASETGMKGVEESEFILGTLETMGLKNEIELDLTLARGLNYYTGAI 303
Query: 340 FEGRKVESNLWGWT 353
FE + ++ + T
Sbjct: 304 FEVKALDVQIGSIT 317
>sp|A6VHK3|SYH_METM7 Histidine--tRNA ligase OS=Methanococcus maripaludis (strain C7 /
ATCC BAA-1331) GN=hisS PE=3 SV=1
Length = 418
Score = 140 bits (353), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 144/277 (51%), Gaps = 18/277 (6%)
Query: 76 PKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCF 135
PKGTRDF PE+M+ R + ++V + F E++ P ES L +K G+EIR QL+ F
Sbjct: 7 PKGTRDFLPEEMKKRKVIEKKLRKVFDSYNFSEINTPTFESFELLSKKTGDEIRTQLFVF 66
Query: 136 EDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNM 195
+D G+R + LRPELT S+AR I + K+ P+K + C+RYE GR RE +Q
Sbjct: 67 KDHGDREMGLRPELTSSVARFYINEFKNTPKPVKLYYFTNCFRYENPQAGRYREFWQMGS 126
Query: 196 DIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVC 255
++IG A+AE+I+ I K I + D I VL+ V + + + ++
Sbjct: 127 ELIGSNKPIADAEVINMAIEGLKEINM---DFEINIGHLGVLKGVFEKYDLSDDEGNEIR 183
Query: 256 IIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKS-----------LTELEGEAVA 304
+IDK + L N ++S E + E++ VL +K L E E ++A
Sbjct: 184 RLIDKEDMDGLKSALNRIESEKNIEIS-EKVFEVLDLKGGREVISKLKEKLAEFES-SIA 241
Query: 305 DLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFE 341
L+ L S+ E + I F + RGL YYTG+VFE
Sbjct: 242 ALENLDSILEFVPHEYIINF--GIARGLDYYTGMVFE 276
>sp|C3N7K1|SYH_SULIY Histidine--tRNA ligase OS=Sulfolobus islandicus (strain Y.G.57.14 /
Yellowstone #1) GN=hisS PE=3 SV=1
Length = 426
Score = 140 bits (352), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 164/278 (58%), Gaps = 17/278 (6%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
+G +D+ D +L F++++ +G+ E+ PV+E LF K GEE+R+ +Y F+
Sbjct: 8 RGMKDYIGIDAEKIRYLESTFRDLAIKYGYSEIITPVVEEFKLFALKGGEELRETMYVFK 67
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+ +R ++LRPE+TPS+AR IQ +S P++ F G +RY+ GR RE Q ++
Sbjct: 68 DKADRELSLRPEITPSVARAYIQNLQSSPKPIRLFYFGTVYRYDEPQYGRYREFRQAGIE 127
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCI 256
+IG ++ A+ E++ + F+ ++ + ++D+ +I++ + ++++ ++I ++L +
Sbjct: 128 MIGDSSILADLEVLDLLYNFYDKLNL-SNDITIKINNIGIFRKIMDKYNIEDNLQEHILH 186
Query: 257 IIDKIEKL--PLDVIKNDLKSAGM----SEAAIEELLRVLSIKSLTELEGEAVADLK--- 307
+IDK K+ LD+++ +LK+ + ++ ++ ++ I+SL ELE + D+K
Sbjct: 187 LIDK-NKINEALDILEKNLKNKDIIDFFNKILTKKDTKLEDIESLAELEEVSRLDIKSEF 245
Query: 308 -LLFSLAEKFGYSDW-IQF--DASVVRGLAYYTGIVFE 341
LF L+ SD I+F D VRGLAYYTG++FE
Sbjct: 246 LYLFRLSRIL--SDLNIKFKIDLGFVRGLAYYTGLIFE 281
>sp|C3MY40|SYH_SULIM Histidine--tRNA ligase OS=Sulfolobus islandicus (strain M.14.25 /
Kamchatka #1) GN=hisS PE=3 SV=1
Length = 426
Score = 140 bits (352), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 160/275 (58%), Gaps = 11/275 (4%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
+G +D+ D +L F++++ +G+ E+ PV+E LF K GEE+R+ +Y F+
Sbjct: 8 RGMKDYIGIDAEKIRYLESTFRDLAIKYGYSEIITPVVEEFKLFALKGGEELRETMYVFK 67
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+ +R ++LRPE+TPS+AR IQ +S P++ F G +RY+ GR RE Q ++
Sbjct: 68 DKADRELSLRPEITPSVARAYIQNLQSSPKPIRLFYFGTVYRYDEPQYGRYREFRQAGIE 127
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCI 256
+IG ++ A+ E++ + F+ ++ + ++D+ +I++ + ++++ ++I ++L +
Sbjct: 128 MIGDSSILADLEVLDLLYNFYDKLNL-SNDITIKINNIGIFRKIMDKYNIEDNLQEHILH 186
Query: 257 IIDKIE-KLPLDVIKNDLKSAGM----SEAAIEELLRVLSIKSLTELEGEAVADLK---- 307
+IDK + LD+++ +LK+ + ++ ++ ++ I+SL ELE + D+K
Sbjct: 187 LIDKNKINEALDILEKNLKNKDIIDFFNKILTKKDTKLEDIESLAELEEVSRLDIKSEFL 246
Query: 308 LLFSLAEKFGYSDW-IQFDASVVRGLAYYTGIVFE 341
LF L+ + + D VRGLAYYTG++FE
Sbjct: 247 YLFRLSRILSNLNIKFKIDLGFVRGLAYYTGLIFE 281
>sp|C3MRE4|SYH_SULIL Histidine--tRNA ligase OS=Sulfolobus islandicus (strain L.S.2.15 /
Lassen #1) GN=hisS PE=3 SV=1
Length = 426
Score = 140 bits (352), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 160/275 (58%), Gaps = 11/275 (4%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
+G +D+ D +L F++++ +G+ E+ PV+E LF K GEE+R+ +Y F+
Sbjct: 8 RGMKDYIGIDAEKIRYLESTFRDLAIKYGYSEIITPVVEEFKLFALKGGEELRETMYVFK 67
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+ +R ++LRPE+TPS+AR IQ +S P++ F G +RY+ GR RE Q ++
Sbjct: 68 DKADRELSLRPEITPSVARAYIQNLQSSPKPIRLFYFGTVYRYDEPQYGRYREFRQAGIE 127
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCI 256
+IG ++ A+ E++ + F+ ++ + ++D+ +I++ + ++++ ++I ++L +
Sbjct: 128 MIGDSSILADLEVLDLLYNFYDKLNL-SNDITIKINNIGIFRKIMDKYNIEDNLQEHILH 186
Query: 257 IIDKIE-KLPLDVIKNDLKSAGM----SEAAIEELLRVLSIKSLTELEGEAVADLK---- 307
+IDK + LD+++ +LK+ + ++ ++ ++ I+SL ELE + D+K
Sbjct: 187 LIDKNKINEALDILEKNLKNKDIIDFFNKILTKKDTKLEDIESLAELEEVSRLDIKSEFL 246
Query: 308 LLFSLAEKFGYSDW-IQFDASVVRGLAYYTGIVFE 341
LF L+ + + D VRGLAYYTG++FE
Sbjct: 247 YLFRLSRILSNLNIKFKIDLGFVRGLAYYTGLIFE 281
>sp|C4KIQ9|SYH_SULIK Histidine--tRNA ligase OS=Sulfolobus islandicus (strain M.16.4 /
Kamchatka #3) GN=hisS PE=3 SV=1
Length = 426
Score = 140 bits (352), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 160/275 (58%), Gaps = 11/275 (4%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
+G +D+ D +L F++++ +G+ E+ PV+E LF K GEE+R+ +Y F+
Sbjct: 8 RGMKDYIGIDAEKIRYLESTFRDLAIKYGYSEIITPVVEEFKLFALKGGEELRETMYVFK 67
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+ +R ++LRPE+TPS+AR IQ +S P++ F G +RY+ GR RE Q ++
Sbjct: 68 DKADRELSLRPEITPSVARAYIQNLQSSPKPIRLFYFGTVYRYDEPQYGRYREFRQAGIE 127
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCI 256
+IG ++ A+ E++ + F+ ++ + ++D+ +I++ + ++++ ++I ++L +
Sbjct: 128 MIGDSSILADLEVLDLLYNFYDKLNL-SNDITIKINNIGIFRKIMDKYNIEDNLQEHILH 186
Query: 257 IIDKIE-KLPLDVIKNDLKSAGM----SEAAIEELLRVLSIKSLTELEGEAVADLK---- 307
+IDK + LD+++ +LK+ + ++ ++ ++ I+SL ELE + D+K
Sbjct: 187 LIDKNKINEALDILEKNLKNKDIIDFFNKILTKKDTKLEDIESLAELEEVSRLDIKSEFL 246
Query: 308 LLFSLAEKFGYSDW-IQFDASVVRGLAYYTGIVFE 341
LF L+ + + D VRGLAYYTG++FE
Sbjct: 247 YLFRLSRILSNLNIKFKIDLGFVRGLAYYTGLIFE 281
>sp|C3NFX3|SYH_SULIN Histidine--tRNA ligase OS=Sulfolobus islandicus (strain Y.N.15.51 /
Yellowstone #2) GN=hisS PE=3 SV=1
Length = 426
Score = 139 bits (351), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 164/282 (58%), Gaps = 25/282 (8%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
+G +D+ D +L F++++ +G+ E+ PV+E LF K GEE+R+ +Y F+
Sbjct: 8 RGMKDYIGIDAEKIRYLESTFRDLAIKYGYSEIITPVVEEFKLFALKGGEELRETMYVFK 67
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+ +R ++LRPE+TPS+AR IQ +S P++ F G +RY+ GR RE Q ++
Sbjct: 68 DKADRELSLRPEITPSVARAYIQNLQSSPKPIRLFYFGTVYRYDEPQYGRYREFRQAGIE 127
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCI 256
+IG ++ A+ E++ + F+ ++ + ++D+ +I++ + ++++ ++I ++L +
Sbjct: 128 MIGDSSILADLEVLDLLYNFYDKLNL-SNDITIKINNIGIFRKIMDKYNIEDNLQEHILH 186
Query: 257 IIDKIEKL--PLDVIKNDLKSAGMSEAAIEELLRVLS--------IKSLTELEGEAVADL 306
+IDK K+ LD+++ +LK+ + I+ ++L+ I+SL ELE + D+
Sbjct: 187 LIDK-NKINEALDILEKNLKNKDI----IDFFYKILTKKDTKLEDIESLAELEEVSRLDI 241
Query: 307 K----LLFSLAEKFGYSDW-IQF--DASVVRGLAYYTGIVFE 341
K LF L+ SD I+F D VRGLAYYTG++FE
Sbjct: 242 KSEFLYLFRLSRIL--SDLNIKFKIDLGFVRGLAYYTGLIFE 281
>sp|A9A947|SYH_METM6 Histidine--tRNA ligase OS=Methanococcus maripaludis (strain C6 /
ATCC BAA-1332) GN=hisS PE=3 SV=1
Length = 418
Score = 139 bits (350), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 143/277 (51%), Gaps = 18/277 (6%)
Query: 76 PKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCF 135
PKGTRDF PE+M+ R + ++V + F E++ P ES L +K GEEIR QL+ F
Sbjct: 7 PKGTRDFLPEEMKKRKNIEKKLRKVFDSYNFSEINTPTFESFELLSKKTGEEIRKQLFVF 66
Query: 136 EDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNM 195
+D G+R + LRPELT S+AR I + K+ P+K + C+RYE GR RE +Q
Sbjct: 67 KDHGDREMGLRPELTSSVARFYINEFKNTPKPVKLYYFTNCFRYENPQAGRYREFWQMGS 126
Query: 196 DIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVC 255
++IG A+AE+I+ I K I + D I VL+ V + + + ++
Sbjct: 127 ELIGSKKPIADAEVINLAIEGLKEINM---DFEINIGHLGVLKGVFEKYDLSDDEGNEIR 183
Query: 256 IIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKS-----------LTELEGEAVA 304
+IDK + L + ++S E + E++ VL +K L+E E A
Sbjct: 184 RLIDKEDMDGLKTALSRIESEKNIEIS-EKVFEVLELKGGREVISKLKEKLSEFESSVTA 242
Query: 305 DLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFE 341
L+ L S+ E + I F + RGL YYTG+VFE
Sbjct: 243 -LENLDSILEFVPHEYIINF--GIARGLDYYTGMVFE 276
>sp|A4G0V7|SYH_METM5 Histidine--tRNA ligase OS=Methanococcus maripaludis (strain C5 /
ATCC BAA-1333) GN=hisS PE=3 SV=1
Length = 418
Score = 139 bits (350), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/277 (34%), Positives = 144/277 (51%), Gaps = 18/277 (6%)
Query: 76 PKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCF 135
PKGTRDF PE+M+ R + ++V + F E++ P ES L +K G+EIR QL+ F
Sbjct: 7 PKGTRDFLPEEMKKRKVIEKKLRKVFDSYNFSEINTPTFESFELLSKKTGDEIRTQLFVF 66
Query: 136 EDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNM 195
+D GNR + LRPELT S+AR I + K+ P+K + C+RYE GR RE +Q
Sbjct: 67 KDHGNREMGLRPELTSSVARFYINEFKNTPKPVKLYYFTNCFRYENPQAGRYREFWQMGS 126
Query: 196 DIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVC 255
++IG A+AE+I+ I K I + D I VL+ V + + + ++
Sbjct: 127 ELIGSKKPIADAEVINMAIDGLKEINM---DFEINIGHLGVLKGVFEKYDLSDDEGTEIR 183
Query: 256 IIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKS-----------LTELEGEAVA 304
+IDK + L + + ++S E + +++ VL +K L E E +V
Sbjct: 184 RLIDKEDMEGLKTVLSRIESEKNIEIS-KKVFEVLELKGGREVISKLKEKLAEFES-SVE 241
Query: 305 DLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFE 341
L+ L S+ E + I F + RGL YYTG+VFE
Sbjct: 242 ALENLDSILEFVPHEYIINF--GIARGLDYYTGMVFE 276
>sp|Q58406|SYH_METJA Histidine--tRNA ligase OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=hisS PE=3 SV=1
Length = 416
Score = 139 bits (350), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 148/287 (51%), Gaps = 18/287 (6%)
Query: 76 PKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCF 135
P+GTRDF PE+M+ R ++ + +EV +G++E+ P ES L +K GEEIR QLY F
Sbjct: 8 PRGTRDFLPEEMKKRRFVENKLREVFERYGYKEILTPTFESFELIAKKTGEEIRKQLYVF 67
Query: 136 EDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNM 195
+D G R +ALRPE+T + R + + K++ PL+ + C+RYER GR RE +Q
Sbjct: 68 KDHGGREMALRPEMTSPVVRFYLNELKNLQKPLRLYYFANCFRYERPQAGRFREFWQMGC 127
Query: 196 DIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVC 255
++IG A+AE+++ + IG+ D I VL+ VL ++ E K+
Sbjct: 128 ELIGCKEPLADAEVLNLAMDGLINIGL---DFDVHIGHLGVLKGVLEKFNVSEEEEVKIR 184
Query: 256 IIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKS-------LTELEGEAVADLKL 308
+IDK + L + + + E E + +L K L E+ + ++
Sbjct: 185 RLIDKEDYDNLKIYLTQI----LGEEKKELIFEILKFKGSREVLDELKEILKDFPKSMEA 240
Query: 309 LFSLAE--KFGYSDWIQFDASVVRGLAYYTGIVFE--GRKVESNLWG 351
+ +L E +F D + + RGL YYTG+VFE G+K + G
Sbjct: 241 INNLEEILEFVIHDKYTINLGIARGLDYYTGMVFEIYGKKGAKQICG 287
>sp|Q7MTB3|SYH_PORGI Histidine--tRNA ligase OS=Porphyromonas gingivalis (strain ATCC
BAA-308 / W83) GN=hisS PE=3 SV=1
Length = 454
Score = 139 bits (349), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 152/317 (47%), Gaps = 46/317 (14%)
Query: 76 PKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQL--- 132
PKG RDF P +M RN++F +EV LFGF +++ P +E + + K GEE D+L
Sbjct: 7 PKGMRDFSPVEMSRRNYIFDTIREVYELFGFNQIETPTMEMLSTLMGKYGEE-GDRLLFK 65
Query: 133 ----------YCFEDRGNRRV----------ALRPELTPSLARLVIQKGKSVSLPLKWFA 172
+C E+ + LR +LT AR V+ ++ P K +
Sbjct: 66 VLNSGDVLADFCAEELAEKNSLRFAAKACEKGLRYDLTVPFARYVVMHRNEINFPFKRYQ 125
Query: 173 VGQCWRYERMTRGRRREHYQWNMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRIS 232
+ WR +R +GR RE YQ + D+IG ++ E ELI I F+R+GI ++
Sbjct: 126 IQPVWRADRPQKGRYREFYQCDGDVIGSDSLMNEVELIQIISEVFRRLGIRTR---ILLN 182
Query: 233 SRKVLQEVLRCHSIPEHLFGKVCIIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSI 292
+RK+L + + L + + IDK++K+ LD + ++L++ G E AIE L + +
Sbjct: 183 NRKILSGIAEVVDEADRL-TDITVAIDKLDKIGLDKVNDELRTKGFGEEAIERLRPFIEM 241
Query: 293 K----------------SLTELEGEAVADLKLLFSLAEKFGYSDWIQFDASVVRGLAYYT 336
K S T L+G + +L + E+ + D S+ RGL+YYT
Sbjct: 242 KGDNREKLDRLKSALASSETGLKG--IEELTYILDKVERVQLHSELMVDISLARGLSYYT 299
Query: 337 GIVFEGRKVESNLWGWT 353
G + E + +++ + T
Sbjct: 300 GAILEVKALDAEMGSIT 316
>sp|P60921|SYH_METMP Histidine--tRNA ligase OS=Methanococcus maripaludis (strain S2 /
LL) GN=hisS PE=3 SV=1
Length = 416
Score = 138 bits (348), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 145/277 (52%), Gaps = 18/277 (6%)
Query: 76 PKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCF 135
PKGTRDF PE+M+ R + ++V + F E++ P ES L +K G+EIR QL+ F
Sbjct: 5 PKGTRDFLPEEMKKRKTIEKKLRKVFDSYNFSEINTPTFESFELLSKKTGDEIRTQLFVF 64
Query: 136 EDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNM 195
D G+R + LRPELT S+AR I + K+ P+K + C+RYE GR RE +Q
Sbjct: 65 RDHGDREMGLRPELTSSVARFYINEFKNTPKPVKLYYFTNCFRYENPQAGRYREFWQMGS 124
Query: 196 DIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVC 255
++IG A+AE+++ I K I + D I VL+ V +++ + ++
Sbjct: 125 ELIGSKKPIADAEVVNMAIEGLKEINM---DFEIHIGHLGVLKGVFEKYNLSDDEGNEIR 181
Query: 256 IIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKS-----------LTELEGEAVA 304
+IDK + L + + L+S E + +++ VL +K L + E +VA
Sbjct: 182 RLIDKEDMDGLKSVLSRLESEKNIEIS-KKVFEVLDLKGGKEVIPILKEKLADFES-SVA 239
Query: 305 DLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFE 341
L+ L S+ E + I F + RGL YYTG+VFE
Sbjct: 240 ALENLDSILEFVPHDYVINF--GIARGLDYYTGMVFE 274
>sp|Q980L3|SYH_SULSO Histidine--tRNA ligase OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=hisS PE=3 SV=1
Length = 426
Score = 137 bits (346), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 158/287 (55%), Gaps = 35/287 (12%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
+G +D+ D +L F+++++ +G+ E+ PV+E LF K GEE+R +Y F+
Sbjct: 8 RGMKDYIGIDAEKIRYLESTFRDLAKKYGYSEIITPVVEEFKLFELKGGEELRQTMYVFK 67
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+ +R ++LRPE+TPS+AR IQ +S P++ F G +RY+ GR RE Q ++
Sbjct: 68 DKADREISLRPEITPSVARAYIQNLQSSPKPIRLFYFGTVYRYDEPQYGRYREFRQAGIE 127
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCI 256
+IG ++ A+ E++ + F+ ++ ++ D+ +I++ + ++++ ++I ++L V
Sbjct: 128 MIGDSSILADVEVLDLLYNFYDKLNLS-KDITIKINNIGIFRKIMDKYNIEDNLQEHVLH 186
Query: 257 IIDKIE-KLPLDVIKNDLKSAGM----------SEAAIEELLRVLSIKSLTELEGEAVAD 305
+IDK + L +++ ++K+ + EA +E+ I+SL ELE + D
Sbjct: 187 LIDKNKVDEALVILEKNIKNKDIMDFLNMILTKKEAKLED------IESLAELEEVSKLD 240
Query: 306 LK-----------LLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFE 341
+K +L SL KF + D VRGLAYYTG++FE
Sbjct: 241 IKNEFEYLLRLSRILSSLNVKF------KVDLGFVRGLAYYTGLIFE 281
>sp|Q2FTC5|SYH_METHJ Histidine--tRNA ligase OS=Methanospirillum hungatei (strain JF-1 /
DSM 864) GN=hisS PE=3 SV=1
Length = 408
Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 155/293 (52%), Gaps = 30/293 (10%)
Query: 73 VNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQL 132
+ P+GTRD P++M R + + +RL+GF E+ PV E LF ++GE I +++
Sbjct: 2 IQKPRGTRDMLPDEMERRREIEARMRARARLYGFREIATPVFEELELFTIRSGEGIINEM 61
Query: 133 YCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQ 192
Y FED+G R +ALRPELT + R+ +++G+S++ P+KW C+RYER +GR R+ +Q
Sbjct: 62 YVFEDKGGRSLALRPELTAPVLRMYVEEGRSLNKPVKWCYFADCFRYERPQKGRYRQFWQ 121
Query: 193 WNMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFG 252
+ ++IG + +AE+I+ + G+T RI ++ +L + +
Sbjct: 122 FGAELIGADSAMGDAEVITLGYDLLRTAGVTFV---LRIGHLSFMRTLL--ADLADGDKK 176
Query: 253 KVCIIIDKIEKLPL-----DVIKNDLKSAGMSEAAIEELLRVLSIKSLTEL-----EGEA 302
K+ +DK E+ D+ ++DL + L+R+ ++L ++ E
Sbjct: 177 KIRAFLDKREEEAAITYLRDIGRDDL---------CDPLIRLCGARTLEDVFAIIGEIPE 227
Query: 303 VADLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVF----EGRKVESNLWG 351
A ++ +F++ + G + + ++ RGL YYTG+VF EG E+ + G
Sbjct: 228 AARVREMFAILDASGIP--YEINPAIARGLDYYTGVVFECFAEGLGAENQILG 278
>sp|Q7VF68|SYH_HELHP Histidine--tRNA ligase OS=Helicobacter hepaticus (strain ATCC 51449
/ 3B1) GN=hisS PE=3 SV=1
Length = 442
Score = 134 bits (338), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 140/283 (49%), Gaps = 21/283 (7%)
Query: 78 GTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFED 137
G +D P++ + L + V FGF ++ P LE + I++ +EI+ +LY F+D
Sbjct: 11 GFKDRLPKEALAKAHLLNKVSNVFMNFGFVPIETPHLEYADVLIKQGSDEIQKELYRFKD 70
Query: 138 RGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMDI 197
G R VALR +LT LAR V Q V LP K +A+G +R ER RGR RE Q + D
Sbjct: 71 HGGRDVALRFDLTVPLARFVSQYKNEVGLPFKRYAIGNVFRGERAQRGRYREFTQCDFDF 130
Query: 198 IGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLR-CHSIPEHLFGKVCI 256
IG +++ +AE++ I ++GI + ++ R +L + C E
Sbjct: 131 IGSDSISCDAEILQVIYASLMKLGI--EEFTIWLNHRSILNGICEYCGITQEKDINVALR 188
Query: 257 IIDKIEKLPLDVIKNDL-KSAGMSEAAIEELLRVLSIKSLTELEG--------------- 300
IIDK++K+ + + +L K G++ +E LL SIK E E
Sbjct: 189 IIDKLDKIGKERVSEELQKELGLNNNQVENLLEYTSIKQQGESESFFRQISFMEEWNDSI 248
Query: 301 -EAVADLKLLFSLAEKFGYS-DWIQFDASVVRGLAYYTGIVFE 341
+ + DLK+L+ + D + + S+ RGL YYTGIV+E
Sbjct: 249 KKGIEDLKMLYEVLSSLQMDRDTYRVNFSIARGLGYYTGIVYE 291
>sp|A6KXA6|SYH_BACV8 Histidine--tRNA ligase OS=Bacteroides vulgatus (strain ATCC 8482 /
DSM 1447 / NCTC 11154) GN=hisS PE=3 SV=1
Length = 454
Score = 134 bits (338), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 148/302 (49%), Gaps = 40/302 (13%)
Query: 76 PKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCF 135
PKGTRDF P +M RN++F+ ++V LFG+++++ P +E+ + + K G+E L+
Sbjct: 8 PKGTRDFSPVEMAKRNYIFNTIRDVFHLFGYQQIETPSMENLSTLMGKYGDEGDKLLFKI 67
Query: 136 EDRGNR----------------------RVALRPELTPSLARLVIQKGKSVSLPLKWFAV 173
++ G+ LR +LT AR V+ +S P K + +
Sbjct: 68 QNSGDYFNGITDEELLSRNAVKLASKFCEKGLRYDLTVPFARYVVMHRDEISFPFKRYQI 127
Query: 174 GQCWRYERMTRGRRREHYQWNMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISS 233
WR +R +GR RE YQ + D++G ++ E EL+ I F + G+ S +I++
Sbjct: 128 QPVWRADRPQKGRYREFYQCDADVVGSNSLLNEVELVQMIDRVFGKFGVRVS---IKINN 184
Query: 234 RKVLQEVLRCHSIPEHLFGKVCIIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVL--- 290
RK+L + + + + + IDK++K+ L+ + +L S G+ + AI++L ++
Sbjct: 185 RKILTGIAEIIGEADKIV-DITVAIDKLDKIGLENVNAELASKGIPQEAIDKLQPIILLS 243
Query: 291 -----------SIKSLTELEGEAVADLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIV 339
++ + +E + V + + + G ++ D ++ RGL YYTG +
Sbjct: 244 GSNEEKLETLKTVLATSEAGLKGVEESEFILKTVSALGVKSEVELDLTLARGLNYYTGAI 303
Query: 340 FE 341
FE
Sbjct: 304 FE 305
>sp|Q6HG86|SYH1_BACHK Histidine--tRNA ligase 1 OS=Bacillus thuringiensis subsp. konkukian
(strain 97-27) GN=hisS1 PE=3 SV=1
Length = 425
Score = 134 bits (338), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 147/278 (52%), Gaps = 17/278 (6%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRK--AGEEIRDQLYC 134
KGT+D+ PE+ LRN + ++ +G + ++ P L L K G+EI ++Y
Sbjct: 7 KGTKDYLPEEQVLRNKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEILKEIYT 66
Query: 135 FEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWN 194
+D+G R +ALR +LT A+ V+ ++ LP K + +G+ +R + +GR RE Q +
Sbjct: 67 LQDQGKRDLALRYDLTIPFAK-VVAMNPNIRLPFKRYEIGKVFRDGPIKQGRFREFIQCD 125
Query: 195 MDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKV 254
+DI+GV +V AEAEL+S F+ + + +V + ++RK+L +L+ IP L V
Sbjct: 126 VDIVGVESVMAEAELMSMAFELFQTLNL---EVTIQYNNRKLLNGILQAIHIPTELTSDV 182
Query: 255 CIIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRV------LSIKSLTE-----LEGEAV 303
+ +DKIEK+ +D ++ D+ G+SE + + LSI E L + V
Sbjct: 183 ILSLDKIEKIGIDGVRKDVLERGISEEMADTICNTVLSCLQLSIADFEEAFNNPLVADGV 242
Query: 304 ADLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFE 341
+L+ L G ++ F+ + RGL YTG V+E
Sbjct: 243 NELQQLQQYLIALGINENTIFNPFLARGLTMYTGTVYE 280
>sp|P60920|SYH_TREDE Histidine--tRNA ligase OS=Treponema denticola (strain ATCC 35405 /
CIP 103919 / DSM 14222) GN=hisS PE=3 SV=1
Length = 448
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 137/281 (48%), Gaps = 19/281 (6%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KG RDF P D R L +V R +GF +D P LE + +RK+G E Q++ F
Sbjct: 11 KGFRDFLPADEIERALLMERLVKVFRDYGFVPIDTPALEYSEILLRKSGGETEKQVFRFS 70
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D G R VA+R +LT LAR V + + P K + +G+ WR E+ GR RE Q + D
Sbjct: 71 DNGGRDVAMRFDLTVPLARFVAEHKSEIYFPFKRYHLGKVWRGEKPQAGRYREFLQCDFD 130
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCI 256
+G + + E++ I +G+ S+ +S R + L+ ++ E +V
Sbjct: 131 TLGSDSAAVDFEILRLIKKALNELGV--SNFKIHVSHRGIFNRFLKSLNLSEDS-EEVLR 187
Query: 257 IIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSI----------KSLTELEG------ 300
I+DK+ K+ D + L E+A + L + + K+L+ LE
Sbjct: 188 IVDKLAKIGEDEVLKLLTDISSEESAKKILAYISGVSKELKSEDFEKTLSHLENLAGGPD 247
Query: 301 EAVADLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFE 341
E ++ +++L + G D I FD S+ RGL YYTG+VFE
Sbjct: 248 EDTKRMRDIYALVKAVGIEDSIVFDPSITRGLDYYTGVVFE 288
>sp|A4YJ03|SYH_METS5 Histidine--tRNA ligase OS=Metallosphaera sedula (strain ATCC 51363
/ DSM 5348) GN=hisS PE=3 SV=1
Length = 430
Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 149/281 (53%), Gaps = 19/281 (6%)
Query: 75 PPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYC 134
P +G D+ D ++ W+ NF+E G++E P++E LF K GEE+R+ +Y
Sbjct: 6 PMRGMEDYFDVDSKIIRWIESNFRETVEKAGYKEAMTPIVEDFELFSLKGGEELRNTMYV 65
Query: 135 FEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWN 194
F+D+G R VALRPE+TPS+ RL + + PL+ F +G+ +RY+ +GR RE Q
Sbjct: 66 FKDKGEREVALRPEITPSIVRLYLNSLQHYPKPLRIFYIGRVYRYDEPQQGRYREFRQAG 125
Query: 195 MDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKV 254
++++G ++ A+ E++ + F++RI + + +I++ + + + S E + +
Sbjct: 126 VELLGSDSILADIEVLHLLENFYRRINL-KDKISLKINNIGIFRIIFNKLSFDEQVQEHL 184
Query: 255 CIIIDK-----IEKLPLDVIKNDLK---------SAGMSEAAIEELLRVLSIKSLTELEG 300
++DK EK+ + I+++ K + G S +EE +R L+EL
Sbjct: 185 LHLLDKGKIEEAEKILDEKIRDNSKIRQFIYTLITNGRS-LKLEEAMREAEKTELSELVN 243
Query: 301 EAVADLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFE 341
E + +LKL+ + + D VRGLAYYTG +FE
Sbjct: 244 E-IENLKLISEILSSLNLDHIV--DLGFVRGLAYYTGPIFE 281
>sp|A6UQQ6|SYH_METVS Histidine--tRNA ligase OS=Methanococcus vannielii (strain SB / ATCC
35089 / DSM 1224) GN=hisS PE=3 SV=1
Length = 418
Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 142/279 (50%), Gaps = 22/279 (7%)
Query: 76 PKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCF 135
PKGTRDF P +M+ R + + + + F E++ P ES L +K GEEIR+QL+ F
Sbjct: 5 PKGTRDFLPVEMKKRKLIEKKLRNIFDSYNFSEINTPTFESFELLSKKTGEEIRNQLFVF 64
Query: 136 EDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNM 195
D GNR + LRPE T S+AR I + K+ P+K + G C+RYE GR RE +Q
Sbjct: 65 NDHGNREMGLRPEFTSSVARFYINEFKNTPKPVKMYYFGNCFRYENPQAGRYREFWQMGA 124
Query: 196 DIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVC 255
++IG ++AE+++ I K I + D I VL+ V +S+ E +
Sbjct: 125 ELIGSNKSISDAEVLNMAIEGLKSINM---DFEINIGHLGVLKGVFEKYSLSEEDETLIR 181
Query: 256 IIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKS-----------LTELEG--EA 302
+IDK + L + ++ E + +++ VL++K LT+ E +A
Sbjct: 182 RLIDKEDTEGLKQVLLKIEEEKNIEIS-KKVFEVLTLKGGKEVISKLKEKLTDFEKSLDA 240
Query: 303 VADLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFE 341
+ +L + L D++ + + RGL YYTG+VFE
Sbjct: 241 LNNLDEILELVP----HDYV-VNFGIARGLDYYTGMVFE 274
>sp|B6YS23|SYH_AZOPC Histidine--tRNA ligase OS=Azobacteroides pseudotrichonymphae
genomovar. CFP2 GN=hisS PE=3 SV=1
Length = 458
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 151/310 (48%), Gaps = 42/310 (13%)
Query: 68 LQKIDVNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEE 127
+QK+ + PKGTRDF P +M RN++F + V L+GF++++ P LE+ + + K GEE
Sbjct: 1 MQKLSI--PKGTRDFTPCEMDKRNYIFDTIRSVFYLYGFKQIETPALENLSTLLGKYGEE 58
Query: 128 IRDQLYCFEDRGN----------------------RRVALRPELTPSLARLVIQKGKSVS 165
L+ + G+ + LR +LT LAR V+ ++
Sbjct: 59 NDKLLFKILNSGDFISKVNPIDWNNHQLSKLTKQISKKGLRYDLTLPLARFVVMHRNEIT 118
Query: 166 LPLKWFAVGQCWRYERMTRGRRREHYQWNMDIIGVPAVTAEAELISSIITFFKRIGITAS 225
P K F + WR +R +GR RE Q + DI+G ++ E ELI I F R+ I+ S
Sbjct: 119 FPFKRFQIQPVWRSDRPQKGRYREFVQCDADIVGSDSLLNEVELIQIIDEVFHRLSISIS 178
Query: 226 DVGFRISSRKVLQEVLRCHSIPEHLFGKVCIIIDKIEKLPLDVIKNDLKSAGMSEAAIEE 285
+I++RK+L + S E + +DK++K+ L + +L G+S AI++
Sbjct: 179 ---IKINNRKILNGIAEIIS-EEKKITDITTAMDKLDKVGLTKVNEELLQKGISIQAIDQ 234
Query: 286 LLRVLSIK--------------SLTELEGEAVADLKLLFSLAEKFGYSDWIQFDASVVRG 331
L +K S + + + + +++ +F+ + I+FD ++ RG
Sbjct: 235 LQPFFLLKGSNQNKISTLKNILSTSPIGIKGLQEIETIFNKLNLIPTRNTIKFDLTLARG 294
Query: 332 LAYYTGIVFE 341
L YYTG +FE
Sbjct: 295 LNYYTGTIFE 304
>sp|Q81N41|SYH1_BACAN Histidine--tRNA ligase 1 OS=Bacillus anthracis GN=hisS-1 PE=3 SV=1
Length = 425
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 151/284 (53%), Gaps = 17/284 (5%)
Query: 71 IDVNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRK--AGEEI 128
+++ KGT+D+ PE+ LR+ + ++ +G + ++ P L L K G+EI
Sbjct: 1 MEIRNVKGTKDYLPEEQVLRSKIKRACEDTFERYGCKPLETPTLNMYELMSYKYGGGDEI 60
Query: 129 RDQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRR 188
++Y +D+G R +ALR +LT A+ V+ ++ LP K + +G+ +R + +GR R
Sbjct: 61 LKEIYTLQDQGKRDLALRYDLTIPFAK-VVAMNPNIRLPFKRYEIGKVFRDGPIKQGRFR 119
Query: 189 EHYQWNMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPE 248
E Q ++DI+GV +V AEAEL+S F+ + + +V + ++RK+L +L+ +IP
Sbjct: 120 EFIQCDVDIVGVESVMAEAELMSMAFELFQTLNL---EVTIQYNNRKLLNGILQAINIPT 176
Query: 249 HLFGKVCIIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRV------LSIKSLTE----- 297
L V + +DKIEK+ +D ++ D+ G+SE + + LSI E
Sbjct: 177 ELTSDVILSLDKIEKIGIDGVRKDVLERGISEEMADTICNTVLSCLQLSIADFKEAFNNP 236
Query: 298 LEGEAVADLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFE 341
L + V +L+ L G ++ F+ + RGL YTG V+E
Sbjct: 237 LVADGVNELQQLQQYLIALGINENTIFNPFLARGLTMYTGTVYE 280
>sp|P70076|SYHC_TAKRU Histidine--tRNA ligase, cytoplasmic OS=Takifugu rubripes GN=hars
PE=3 SV=1
Length = 519
Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 152/290 (52%), Gaps = 27/290 (9%)
Query: 73 VNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQL 132
+ KGTRD+ P+ M +R +F+ + G E +D PV E + K GE+ + +
Sbjct: 61 LKTAKGTRDYNPKQMAIREKVFNTIVSCFKRHGAETIDTPVFELKETLTGKYGEDSK-LI 119
Query: 133 YCFEDRGNRRVALRPELTPSLAR-LVIQKGKSVSLPLKWFAVGQCWRYER--MTRGRRRE 189
Y +D+G ++LR +LT AR L + K ++ K + + + +R + MTRGR RE
Sbjct: 120 YDLKDQGGELLSLRYDLTVPFARYLAMNKITNI----KRYHIAKVYRRDNPAMTRGRYRE 175
Query: 190 HYQWNMDIIG-VPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPE 248
YQ + DI G A+ +AE + + + + D +++ R++L + +P+
Sbjct: 176 FYQCDFDIAGQYDAMIPDAECLKIVHEILSELDL--GDFRIKVNDRRILDGMFAVCGVPD 233
Query: 249 HLFGKVCIIIDKIEKLPLDVIKNDL-KSAGMSEAAIEELLRVLSIKSLTEL--------- 298
++F +C +DK++KLP + +KN++ G+SE A +++ + ++ +L
Sbjct: 234 NMFRTICSTVDKLDKLPWEAVKNEMVNEKGLSEEAADQIGVYVGMQGGMDLAERLLQDQK 293
Query: 299 ---EGEAVA---DLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFEG 342
+A A D+KLLFS + F +D + FD S+ RGL YYTGI++E
Sbjct: 294 MCQSTQACAGLTDIKLLFSYLQLFQVTDKVVFDLSLARGLDYYTGIIYEA 343
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 130,916,902
Number of Sequences: 539616
Number of extensions: 5550739
Number of successful extensions: 16932
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 182
Number of HSP's that attempted gapping in prelim test: 14206
Number of HSP's gapped (non-prelim): 1234
length of query: 354
length of database: 191,569,459
effective HSP length: 118
effective length of query: 236
effective length of database: 127,894,771
effective search space: 30183165956
effective search space used: 30183165956
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)