Your job contains 1 sequence.
>018558
MDYRTESSETLRNKCAACFRQFNRLEHLVEHMRTSYHSVHEPVCGICKKHCRSFESLREH
LIGPLPKQECKNVFNNRGCRFCLAILDGPNARRLHQERCQMVSSATTGLNARLANLGVRD
SLTIDNTHTRDPQVVAIACKMVGGGSDGSLDLCGRVCIIDEYENIIFHAYVKPPIPVTSY
RYETTGIRPEHLRDAIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRL
QVEYPAIMTRDTAKYPPLMKTSKLSNSLKYLTQAYLGYDIQIGIQDPYDDCVATMRLYMR
MKSQAHKREDYPLASDPQNRNNYASWRQTELERMSPEEMLAISRSDYYCWCLDR
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 018558
(354 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2086839 - symbol:AT3G27970 species:3702 "Arabi... 1485 3.2e-152 1
TAIR|locus:2170533 - symbol:AT5G40310 species:3702 "Arabi... 1403 1.6e-143 1
TAIR|locus:2066406 - symbol:AT2G48100 species:3702 "Arabi... 767 3.9e-76 1
ASPGD|ASPL0000065793 - symbol:AN10955 species:162425 "Eme... 237 5.7e-20 1
SGD|S000005440 - symbol:REX4 "Putative RNA exonuclease po... 236 7.2e-20 1
UNIPROTKB|F1PBR5 - symbol:REXO4 "Uncharacterized protein"... 241 9.1e-19 1
UNIPROTKB|Q9GZR2 - symbol:REXO4 "RNA exonuclease 4" speci... 241 1.0e-18 1
TAIR|locus:2086320 - symbol:AT3G15080 species:3702 "Arabi... 225 1.2e-18 1
CGD|CAL0003518 - symbol:orf19.5220 species:5476 "Candida ... 219 6.5e-18 1
UNIPROTKB|H9KZR7 - symbol:H9KZR7 "Uncharacterized protein... 229 2.7e-17 1
FB|FBgn0036405 - symbol:CG6833 species:7227 "Drosophila m... 213 3.3e-17 1
UNIPROTKB|F1NQP7 - symbol:Gga.48606 "Uncharacterized prot... 229 4.1e-17 1
RGD|1306220 - symbol:Rexo4 "REX4, RNA exonuclease 4 homol... 226 9.4e-17 1
MGI|MGI:2684957 - symbol:Rexo4 "REX4, RNA exonuclease 4 h... 226 1.2e-16 1
POMBASE|SPBC1604.09c - symbol:SPBC1604.09c "exoribonuclea... 205 2.8e-16 1
ZFIN|ZDB-GENE-120215-216 - symbol:si:ch73-209e20.4 "si:ch... 222 3.3e-16 1
WB|WBGene00012465 - symbol:Y17G7B.12 species:6239 "Caenor... 201 7.9e-16 1
ZFIN|ZDB-GENE-070928-8 - symbol:isg20l2 "interferon stimu... 209 3.5e-15 1
UNIPROTKB|I3L751 - symbol:REXO4 "Uncharacterized protein"... 213 4.3e-15 1
UNIPROTKB|E2R7T9 - symbol:REXO4 "Uncharacterized protein"... 210 1.2e-14 1
UNIPROTKB|E2QS77 - symbol:ISG20L2 "Uncharacterized protei... 204 2.5e-14 1
UNIPROTKB|F1SRT3 - symbol:AEN "Uncharacterized protein" s... 202 3.1e-14 1
UNIPROTKB|Q9H9L3 - symbol:ISG20L2 "Interferon-stimulated ... 199 1.1e-13 1
UNIPROTKB|Q8WTP8 - symbol:AEN "Apoptosis-enhancing nuclea... 196 1.7e-13 1
UNIPROTKB|F1N5B5 - symbol:REXO4 "Uncharacterized protein"... 199 1.8e-13 1
UNIPROTKB|F1MZX4 - symbol:LOC614749 "Uncharacterized prot... 194 3.1e-13 1
UNIPROTKB|J9PA78 - symbol:AEN "Uncharacterized protein" s... 191 7.0e-13 1
UNIPROTKB|H9L3P1 - symbol:H9L3P1 "Uncharacterized protein... 191 7.4e-13 1
UNIPROTKB|H9L3P2 - symbol:H9L3P2 "Uncharacterized protein... 191 7.5e-13 1
UNIPROTKB|F1PWV6 - symbol:AEN "Uncharacterized protein" s... 191 8.3e-13 1
MGI|MGI:2140076 - symbol:Isg20l2 "interferon stimulated e... 191 1.2e-12 1
RGD|1359413 - symbol:Isg20l2 "interferon stimulated exonu... 191 1.2e-12 1
UNIPROTKB|F1RHI9 - symbol:ISG20L2 "Uncharacterized protei... 185 4.7e-12 1
UNIPROTKB|Q2YDK1 - symbol:ISG20L2 "Interferon-stimulated ... 185 5.0e-12 1
UNIPROTKB|Q5REE2 - symbol:AEN "Apoptosis-enhancing nuclea... 183 6.5e-12 1
RGD|1305051 - symbol:Aen "apoptosis enhancing nuclease" s... 181 1.2e-11 1
UNIPROTKB|F8WG03 - symbol:Aen "Apoptosis-enhancing nuclea... 181 1.6e-11 1
MGI|MGI:1915298 - symbol:Aen "apoptosis enhancing nucleas... 176 5.0e-11 1
TAIR|locus:2083163 - symbol:SDN1 "small RNA degrading nuc... 177 6.8e-11 1
UNIPROTKB|E1C018 - symbol:AEN "Uncharacterized protein" s... 173 7.4e-11 1
UNIPROTKB|E2R2F5 - symbol:ISG20 "Uncharacterized protein"... 147 8.4e-10 1
ASPGD|ASPL0000067196 - symbol:AN7566 species:162425 "Emer... 168 2.0e-09 1
RGD|1306407 - symbol:Isg20 "interferon stimulated exonucl... 140 5.0e-09 1
UNIPROTKB|F6X5D6 - symbol:ISG20 "Uncharacterized protein"... 139 6.4e-09 1
SGD|S000003508 - symbol:RNH70 "3'-5' exoribonuclease" spe... 158 1.7e-08 1
UNIPROTKB|Q96AZ6 - symbol:ISG20 "Interferon-stimulated ge... 135 1.8e-08 1
WB|WBGene00015462 - symbol:C05C8.5 species:6239 "Caenorha... 155 4.2e-08 1
UNIPROTKB|G4MYV4 - symbol:MGG_15523 "Uncharacterized prot... 154 7.3e-08 1
UNIPROTKB|Q66UW5 - symbol:Isg20 "Interferon-stimulated ge... 131 1.4e-07 1
UNIPROTKB|I3LB04 - symbol:ISG20 "Uncharacterized protein"... 126 5.1e-07 1
UNIPROTKB|E1BNM5 - symbol:ISG20 "Uncharacterized protein"... 123 1.4e-06 1
POMBASE|SPAC637.09 - symbol:SPAC637.09 "ribonuclease H70 ... 141 1.7e-06 1
TAIR|locus:2169717 - symbol:SDN2 "small RNA degrading nuc... 139 1.8e-06 1
TAIR|locus:2155563 - symbol:SDN3 "small RNA degrading nuc... 140 2.9e-06 1
POMBASE|SPAC1782.08c - symbol:rex3 "exonuclease Rex3 (pre... 136 4.8e-06 1
UNIPROTKB|G3N2Q8 - symbol:ISG20 "Uncharacterized protein"... 123 5.1e-06 1
DICTYBASE|DDB_G0281327 - symbol:rexo4 "RNA exonuclease 4"... 130 7.5e-06 1
UNIPROTKB|H0YMJ6 - symbol:AEN "Apoptosis-enhancing nuclea... 120 1.2e-05 1
MGI|MGI:1928895 - symbol:Isg20 "interferon-stimulated pro... 128 1.3e-05 1
DICTYBASE|DDB_G0291590 - symbol:rexo1 "RNA exonuclease 1"... 130 3.2e-05 1
TAIR|locus:2083153 - symbol:AT3G50090 species:3702 "Arabi... 99 0.00074 2
>TAIR|locus:2086839 [details] [associations]
symbol:AT3G27970 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR006055 InterPro:IPR007087 InterPro:IPR012337
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
SMART:SM00479 Pfam:PF00929 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098 EMBL:BT033110
EMBL:AB493636 IPI:IPI00533339 RefSeq:NP_189436.2 UniGene:At.50233
ProteinModelPortal:B3LFC1 SMR:B3LFC1 PaxDb:B3LFC1 PRIDE:B3LFC1
EnsemblPlants:AT3G27970.1 GeneID:822421 KEGG:ath:AT3G27970
TAIR:At3g27970 HOGENOM:HOG000237419 OMA:LPKVECA PhylomeDB:B3LFC1
ProtClustDB:CLSN2687545 Genevestigator:B3LFC1 Uniprot:B3LFC1
Length = 357
Score = 1485 (527.8 bits), Expect = 3.2e-152, P = 3.2e-152
Identities = 268/355 (75%), Positives = 304/355 (85%)
Query: 1 MDYRT--ESSETLRNKCAACFRQFNRLEHLVEHMRTSYHSVHEPVCGICKKHCRSFESLR 58
MDYR+ ESSETLRNKCAAC+RQFN+LEHLVEHM+ SYHS HEP CG+CKKHCRSFESLR
Sbjct: 1 MDYRSSMESSETLRNKCAACYRQFNKLEHLVEHMKISYHSGHEPTCGVCKKHCRSFESLR 60
Query: 59 EHLIGPLPKQECKNVFNNRGCRFCLAILDGPNARRLHQERCQMVSSATTGLNARLANLGV 118
EHLIGPLPKQECKN+F+ RGCRFC+ IL+ PN+RR+HQERCQ SS +GL R+A LG+
Sbjct: 61 EHLIGPLPKQECKNIFSLRGCRFCMTILESPNSRRIHQERCQF-SSVNSGLTTRMAALGL 119
Query: 119 RDSLTIDNTHTRDPQVVAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVT 178
RD ID T +R P+VVA++CKMV C RVCI DE +N+IFH YVKP + VT
Sbjct: 120 RDKAMIDYTSSRSPRVVALSCKMVGGGSDGSLDLCARVCITDESDNVIFHTYVKPSMAVT 179
Query: 179 SYRYETTGIRPEHLRDAIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLD 238
SYRYETTGIRPE+LRDA+PLKQVQRKIQ+FLCNGEPMWKIRPRG +ARILVGHGLDHDLD
Sbjct: 180 SYRYETTGIRPENLRDAMPLKQVQRKIQEFLCNGEPMWKIRPRGGKARILVGHGLDHDLD 239
Query: 239 RLQVEYPAIMTRDTAKYPPLMKTSKLSNSLKYLTQAYLGYDIQIGIQDPYDDCVATMRLY 298
RLQ+EYP+ M RDTAKYPPLMKTSKLSNSLKYLTQAYLGYD+ GIQDPY+DCVATMRLY
Sbjct: 240 RLQLEYPSSMIRDTAKYPPLMKTSKLSNSLKYLTQAYLGYDVHFGIQDPYEDCVATMRLY 299
Query: 299 MRMKSQAHKREDYPLASDPQNRNNYASWRQTELERMSPEEMLAISRSDYYCWCLD 353
RM+ Q HK E YPLA+D QNR+N +WRQ+E ERMSP+EML+ISRSDYYCWCLD
Sbjct: 300 TRMRYQKHKIEAYPLAADAQNRSNQVAWRQSEAERMSPDEMLSISRSDYYCWCLD 354
>TAIR|locus:2170533 [details] [associations]
symbol:AT5G40310 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00096 InterPro:IPR006055 InterPro:IPR007087
InterPro:IPR012337 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50157 SMART:SM00355 SMART:SM00479 Pfam:PF00929
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 eggNOG:COG0847 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:AB006702 HOGENOM:HOG000237419
ProtClustDB:CLSN2687545 IPI:IPI00536517 RefSeq:NP_198847.1
UniGene:At.55275 ProteinModelPortal:Q9FNE7 SMR:Q9FNE7
EnsemblPlants:AT5G40310.1 GeneID:834029 KEGG:ath:AT5G40310
TAIR:At5g40310 InParanoid:Q9FNE7 OMA:ITDESEN PhylomeDB:Q9FNE7
Genevestigator:Q9FNE7 Uniprot:Q9FNE7
Length = 348
Score = 1403 (498.9 bits), Expect = 1.6e-143, P = 1.6e-143
Identities = 250/345 (72%), Positives = 290/345 (84%)
Query: 9 ETLRNKCAACFRQFNRLEHLVEHMRTSYHSVHEPVCGICKKHCRSFESLREHLIGPLPKQ 68
+T RNKC C+RQFN+ EHLVEHMR SYHSVHEP CGIC KHCRSF+SLREHLIGPLPKQ
Sbjct: 2 DTCRNKCGGCYRQFNKKEHLVEHMRISYHSVHEPTCGICNKHCRSFDSLREHLIGPLPKQ 61
Query: 69 ECKNVFNNRGCRFCLAILDGPNARRLHQERCQMVSSATTGLNARLANLGVRDSLTIDNTH 128
ECKN+F+ RGCRFCL IL+ PNARR+HQERCQ+ S+ T+GL R+A LG+R++ TID T
Sbjct: 62 ECKNIFSIRGCRFCLTILESPNARRIHQERCQL-SNVTSGLMIRMAALGLRNNSTIDYTS 120
Query: 129 TRDPQVVAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIR 188
+R P+VVA++CKMV C RVCI DE EN++FH YVKP IPVT+YRYE TGIR
Sbjct: 121 SRSPRVVALSCKMVGGGSDGSLDLCARVCITDESENVVFHTYVKPTIPVTNYRYEMTGIR 180
Query: 189 PEHLRDAIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIM 248
PE+LRDA+ LK QRK+Q+FLCNGEPMWKIRPR +ARILVGHGLD+ LD LQ+EY + M
Sbjct: 181 PENLRDAMRLKHAQRKVQEFLCNGEPMWKIRPRNGKARILVGHGLDNHLDSLQLEYSSSM 240
Query: 249 TRDTAKYPPLMKTSKLSNSLKYLTQAYLGYDIQIGIQDPYDDCVATMRLYMRMKSQAHKR 308
RDTA+YPPLMK+SKLSNSLKYLTQAYLGYDI +GIQDPY+DCVATMRLY RM+ Q H+
Sbjct: 241 IRDTAEYPPLMKSSKLSNSLKYLTQAYLGYDIHVGIQDPYEDCVATMRLYTRMRYQKHRA 300
Query: 309 EDYPLASDPQNRNNYASWRQTELERMSPEEMLAISRSDYYCWCLD 353
E YPLASD QN NN+A+WRQ ELERMSPEE+L +SRSDYYCWCLD
Sbjct: 301 EAYPLASDTQNHNNFAAWRQNELERMSPEELLDLSRSDYYCWCLD 345
>TAIR|locus:2066406 [details] [associations]
symbol:AT2G48100 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=RCA]
InterPro:IPR006055 InterPro:IPR007087 InterPro:IPR012337
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
SMART:SM00479 Pfam:PF00929 EMBL:CP002685 GO:GO:0008270
GO:GO:0003676 GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:AC006072 EMBL:AF386965 EMBL:AY081469
IPI:IPI00546038 PIR:D84923 RefSeq:NP_001031560.1 RefSeq:NP_566124.1
RefSeq:NP_973715.1 UniGene:At.13478 ProteinModelPortal:Q9ZU79
SMR:Q9ZU79 EnsemblPlants:AT2G48100.1 EnsemblPlants:AT2G48100.2
EnsemblPlants:AT2G48100.3 GeneID:819422 KEGG:ath:AT2G48100
TAIR:At2g48100 InParanoid:Q9ZU79 OMA:MRLYKRM PhylomeDB:Q9ZU79
ProtClustDB:CLSN2917359 ArrayExpress:Q9ZU79 Genevestigator:Q9ZU79
Uniprot:Q9ZU79
Length = 344
Score = 767 (275.1 bits), Expect = 3.9e-76, P = 3.9e-76
Identities = 150/347 (43%), Positives = 215/347 (61%)
Query: 10 TLRNKCAACFRQFNRLEHLVEHMRTSYHSVHEPVCGICKKHCRSFESLREHLIGP--LPK 67
++R++C AC++ FNR EHLVEHM+ SYHS+H+P CG+C KHC+SFES+REHL P L K
Sbjct: 14 SVRHRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDHLSK 73
Query: 68 QECKNVFNNRGCRFCLAILDGPNARRLHQERCQMVSSATTGLNARLANLGVRDSLTIDNT 127
CK +F RGC CL I + A H+ +C + G + + S ++ +
Sbjct: 74 GNCKAIFTKRGCTLCLQIFEEAFALAEHKNKCHLSPPRPLGTSTQR-----NPSSSLAGS 128
Query: 128 HTRDPQVVAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYETTGI 187
+ +A+ C+MV C VC++D+ EN+IF +V+P +PVT YR+E TG+
Sbjct: 129 RLK---AMALDCEMVGGGADGTIDQCASVCLVDDDENVIFSTHVQPLLPVTDYRHEITGL 185
Query: 188 RPEHLRDAIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAI 247
E L+D +PL+ V+ ++ FLC G+ G+ +LVGH L HD+ L++EYP+
Sbjct: 186 TKEDLKDGMPLEHVRERVFSFLCGGQN------DGAGRLLLVGHDLRHDMSCLKLEYPSH 239
Query: 248 MTRDTAKYPPLMKTSKLSNSLKYLTQAYLGYDIQIGIQDPYDDCVATMRLYMRMKSQAHK 307
+ RDTAKY PLMKT+ +S SLKYLT++YLGY IQ G + Y+DCV+ MRLY RM+ Q H
Sbjct: 240 LLRDTAKYVPLMKTNLVSQSLKYLTKSYLGYKIQCGKHEVYEDCVSAMRLYKRMRDQEH- 298
Query: 308 REDYPLASDPQNRNNYASWRQTELERMSPEEMLAISRSDYYCWCLDR 354
+ S N S +Q++LE+M+ EE+ S S+Y CWCLDR
Sbjct: 299 -----VCSGKAEGNGLNSRKQSDLEKMNAEELYQKSTSEYRCWCLDR 340
>ASPGD|ASPL0000065793 [details] [associations]
symbol:AN10955 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0000027 "ribosomal large subunit assembly"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
GO:GO:0003676 GO:GO:0005622 EMBL:BN001304 GO:GO:0004527
HOGENOM:HOG000182422 InterPro:IPR013520 SUPFAM:SSF53098
ProteinModelPortal:C8VBH1 EnsemblFungi:CADANIAT00000588 OMA:KHMAEAR
Uniprot:C8VBH1
Length = 299
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 62/192 (32%), Positives = 100/192 (52%)
Query: 135 VAIACKMVXXXXX-XXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIRPEHLR 193
+A+ C+MV RV I++ + ++ +YV+P VT +R +GI P+H+
Sbjct: 105 IAMDCEMVGIGPDPDNDSALARVSIVNYNGDQVYDSYVRPKEMVTDWRTHVSGILPKHMA 164
Query: 194 DAIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIMTRDTA 253
+A L+QVQ+++ + L RILVGH L +DLD L + +P RDT+
Sbjct: 165 EARSLEQVQKEVAEIL--------------EGRILVGHALRNDLDALLLSHPKRDIRDTS 210
Query: 254 KYPPLMKTSKL-SNSLKYLTQAYLGYDIQIGIQDPYDDCVATMRLYMRMKSQAHKR--ED 310
K+PP K + S LK L +LG +IQ G +D ATM LY R K + + +
Sbjct: 211 KHPPYRKVAGGGSPRLKILASEFLGLNIQAGAHSSMEDAKATMLLYRRDKDEFEREHLKK 270
Query: 311 YPLASDPQNRNN 322
+P+ + P+++ N
Sbjct: 271 WPVRALPESKEN 282
>SGD|S000005440 [details] [associations]
symbol:REX4 "Putative RNA exonuclease possibly involved in
ribosome biogenesis" species:4932 "Saccharomyces cerevisiae"
[GO:0005622 "intracellular" evidence=IEA] [GO:0004518 "nuclease
activity" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA;IGI]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0008408 "3'-5' exonuclease
activity" evidence=ISS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0090305 "nucleic acid phosphodiester bond hydrolysis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000027 "ribosomal large subunit assembly" evidence=IGI]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 SGD:S000005440
Pfam:PF00929 GO:GO:0005730 EMBL:BK006948 GO:GO:0003676
eggNOG:COG0847 HOGENOM:HOG000182422 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00520000055542 GO:GO:0008408
GO:GO:0006364 KO:K01175 GO:GO:0000027 EMBL:Z74822 OrthoDB:EOG4TB7M4
PIR:S66773 RefSeq:NP_014561.1 ProteinModelPortal:Q08237 SMR:Q08237
DIP:DIP-5458N IntAct:Q08237 MINT:MINT-543211 STRING:Q08237
PaxDb:Q08237 EnsemblFungi:YOL080C GeneID:854075 KEGG:sce:YOL080C
CYGD:YOL080c OMA:ALMLSHP NextBio:975698 Genevestigator:Q08237
GermOnline:YOL080C Uniprot:Q08237
Length = 289
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 59/195 (30%), Positives = 101/195 (51%)
Query: 116 LGVRDSLTIDNTHTRD-PQVVAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPP 174
+G+ + I++ +++ + +A+ C+ V R+ I++ + +++ +VKP
Sbjct: 102 VGISEDTRINSNKSKEIGKYIAMDCEFVGVGPEGKESALARISIVNYFGHVVLDEFVKPR 161
Query: 175 IPVTSYRYETTGIRPEHLRDAIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLD 234
V +R +GI+PEH+++AI K+ Q+K D L RILVGH L
Sbjct: 162 EKVVEWRTWVSGIKPEHMKNAITFKEAQKKTADIL--------------EGRILVGHALK 207
Query: 235 HDLDRLQVEYPAIMTRDTAKYPPLMKT-SK-LSNSLKYLTQAYLGYDIQIGIQDPYDDCV 292
HDL+ L + +P + RDT+++ P K +K + SLK LT+ L IQ G +D
Sbjct: 208 HDLEALMLSHPKSLLRDTSRHLPFRKLYAKGKTPSLKKLTREVLKISIQEGEHSSVEDAR 267
Query: 293 ATMRLYMRMKSQAHK 307
ATM LY + K++ K
Sbjct: 268 ATMLLYKKEKTEFEK 282
>UNIPROTKB|F1PBR5 [details] [associations]
symbol:REXO4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:AAEX03006772
Ensembl:ENSCAFT00000031428 Uniprot:F1PBR5
Length = 411
Score = 241 (89.9 bits), Expect = 9.1e-19, P = 9.1e-19
Identities = 62/190 (32%), Positives = 93/190 (48%)
Query: 133 QVVAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIRPEHL 192
+ +A+ C+MV RV I+++Y ++ YVKP PVT YR +GIRPE+L
Sbjct: 231 RALAMDCEMVGAGPKGEESVAARVSIVNQYGKCVYDKYVKPTQPVTDYRTAVSGIRPENL 290
Query: 193 RDAIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIMTRDT 252
+ + VQ+++ D L + RILVGH L +DL L +++P RDT
Sbjct: 291 KQGEKFEVVQKEVADML--------------KGRILVGHALHNDLKVLFLDHPKKKIRDT 336
Query: 253 AKYPPLMKTSKLSN-SLKYLTQAYLGYDIQIGIQDPYDDCVATMRLYMRMKSQ--AHKRE 309
KY P K SLK L + LG +Q D A MRLY+ +K + + ++
Sbjct: 337 QKYKPFKSQVKSGRPSLKLLAERILGIQVQQAEHCSIQDAQAAMRLYILVKKEWESTAQD 396
Query: 310 DYPLASDPQN 319
+P A P +
Sbjct: 397 RHPTAPTPDS 406
>UNIPROTKB|Q9GZR2 [details] [associations]
symbol:REXO4 "RNA exonuclease 4" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=NAS]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005730
EMBL:CH471090 GO:GO:0003700 GO:GO:0003676 GO:GO:0004527
GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
EMBL:AL158826 KO:K01175 EMBL:AF295774 EMBL:AF273304 EMBL:AL136894
EMBL:AK025493 EMBL:AK314333 EMBL:BC009274 IPI:IPI00010653
IPI:IPI00513877 RefSeq:NP_065118.2 UniGene:Hs.438409
ProteinModelPortal:Q9GZR2 SMR:Q9GZR2 IntAct:Q9GZR2 STRING:Q9GZR2
PhosphoSite:Q9GZR2 DMDM:71153418 SWISS-2DPAGE:Q9GZR2 PaxDb:Q9GZR2
PRIDE:Q9GZR2 DNASU:57109 Ensembl:ENST00000371935
Ensembl:ENST00000371942 Ensembl:ENST00000445916
Ensembl:ENST00000453165 Ensembl:ENST00000454825
Ensembl:ENST00000562216 Ensembl:ENST00000568937
Ensembl:ENST00000569763 Ensembl:ENST00000570226 GeneID:57109
KEGG:hsa:57109 UCSC:uc004cdm.3 CTD:57109 GeneCards:GC09M136271
HGNC:HGNC:12820 HPA:HPA047006 MIM:602930 neXtProt:NX_Q9GZR2
PharmGKB:PA37414 HOGENOM:HOG000231626 HOVERGEN:HBG000999
InParanoid:Q9GZR2 OMA:QKEVAEM OrthoDB:EOG4VX263 PhylomeDB:Q9GZR2
GenomeRNAi:57109 NextBio:62959 ArrayExpress:Q9GZR2 Bgee:Q9GZR2
CleanEx:HS_REXO4 Genevestigator:Q9GZR2 GermOnline:ENSG00000148300
Uniprot:Q9GZR2
Length = 422
Score = 241 (89.9 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 62/190 (32%), Positives = 95/190 (50%)
Query: 133 QVVAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIRPEHL 192
+ +A+ C+MV RV I+++Y ++ YVKP PVT YR +GIRPE+L
Sbjct: 242 RALALDCEMVGVGPKGEESMAARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRPENL 301
Query: 193 RDAIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIMTRDT 252
+ L+ VQ+++ + L + RILVGH L +DL L +++P RDT
Sbjct: 302 KQGEELEVVQKEVAEML--------------KGRILVGHALHNDLKVLFLDHPKKKIRDT 347
Query: 253 AKYPPLMKTSKLSN-SLKYLTQAYLGYDIQIGIQDPYDDCVATMRLYMRMKSQ--AHKRE 309
KY P K SL+ L++ LG +Q D A MRLY+ +K + + R+
Sbjct: 348 QKYKPFKSQVKSGRPSLRLLSEKILGLQVQQAEHCSIQDAQAAMRLYVMVKKEWESMARD 407
Query: 310 DYPLASDPQN 319
PL + P +
Sbjct: 408 RRPLLTAPDH 417
>TAIR|locus:2086320 [details] [associations]
symbol:AT3G15080 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 eggNOG:COG0847 HOGENOM:HOG000182422
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AY087954 EMBL:BT024904
EMBL:EU682310 EMBL:AK228883 IPI:IPI00522165 RefSeq:NP_566499.1
UniGene:At.39112 ProteinModelPortal:Q8LAA0 STRING:Q8LAA0
PaxDb:Q8LAA0 PRIDE:Q8LAA0 EnsemblPlants:AT3G15080.1 GeneID:820738
KEGG:ath:AT3G15080 TAIR:At3g15080 InParanoid:Q8LAA0 OMA:CPIEDAR
PhylomeDB:Q8LAA0 ProtClustDB:CLSN2688390 Genevestigator:Q8LAA0
Uniprot:Q8LAA0
Length = 275
Score = 225 (84.3 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 57/173 (32%), Positives = 86/173 (49%)
Query: 135 VAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIRPEHLRD 194
VA+ C+MV GRV +++++ N+++ +V+P V +R +GIRP LR
Sbjct: 84 VAMDCEMVGVSQGTKSAL-GRVTLVNKWGNVLYDEFVRPVEHVVDFRTSISGIRPRDLRK 142
Query: 195 AIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIMTRDTAK 254
A + Q K+ + + + +ILVGH L +DL L + +P RDT +
Sbjct: 143 AKDFRVAQTKVAELI--------------KGKILVGHALHNDLKALLLTHPKKDIRDTGE 188
Query: 255 YPPLMKTSKLSNSLKYLTQAYLGYDIQIGIQDPYDDCVATMRLYMRMKSQAHK 307
Y P +K K SLK+L LG DIQ G P DD A M LY + + + K
Sbjct: 189 YQPFLK-GKTRKSLKHLASEILGADIQNGEHCPIDDARAAMMLYQKNRKEWEK 240
>CGD|CAL0003518 [details] [associations]
symbol:orf19.5220 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0000027 "ribosomal large subunit
assembly" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 CGD:CAL0003518
Pfam:PF00929 GO:GO:0005634 GO:GO:0003676 GO:GO:0004527
GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
GO:GO:0006364 KO:K01175 EMBL:AACQ01000070 EMBL:AACQ01000071
RefSeq:XP_716289.1 RefSeq:XP_716353.1 ProteinModelPortal:Q5A3Q0
STRING:Q5A3Q0 GeneID:3641941 GeneID:3642012 KEGG:cal:CaO19.12687
KEGG:cal:CaO19.5220 Uniprot:Q5A3Q0
Length = 285
Score = 219 (82.2 bits), Expect = 6.5e-18, P = 6.5e-18
Identities = 60/185 (32%), Positives = 93/185 (50%)
Query: 122 LTIDNTHTRDP-QVVAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSY 180
L+ +++ DP + VAI C+ V R+ II+ Y ++ YV+P VT +
Sbjct: 103 LSRNDSRKLDPGKYVAIDCEFVGIGKDGEESALARISIINYYGVVLLDTYVRPQERVTDW 162
Query: 181 RYETTGIRPEHLRDAIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRL 240
R +GI+ H++DAI K Q K + + N +ILVGH +++DLD L
Sbjct: 163 RTWVSGIQSYHMQDAIDFKTAQLKTMELINN--------------KILVGHAVNNDLDIL 208
Query: 241 QVEYPAIMTRDTAKYPPLMKTSK-LSNSLKYLTQAYLGYDIQIGIQDPYDDCVATMRLYM 299
+ +P M RDT K+P + + S SLK L + ++ DIQIG +D ATM L+
Sbjct: 209 FLSHPKSMIRDTCKFPKFREIAGGKSPSLKKLIKHFIQVDIQIGQHSSVEDARATMLLFR 268
Query: 300 RMKSQ 304
K +
Sbjct: 269 LFKRE 273
>UNIPROTKB|H9KZR7 [details] [associations]
symbol:H9KZR7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:AADN02075373
Ensembl:ENSGALT00000017760 OMA:PTESDIW Uniprot:H9KZR7
Length = 379
Score = 229 (85.7 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 68/204 (33%), Positives = 92/204 (45%)
Query: 102 VSSATTGLNARLANLGVRDSLTIDNTHTRDPQVVAIACKMVXXXXXXXXXXCGRVCIIDE 161
V+ GL A + V L + + + VA+ C+MV RV I++
Sbjct: 173 VARRKLGLEAGQSKQSVEQVLVKEKSSGGLTRAVAMDCEMVGVGPSGEDSIVARVSIVNL 232
Query: 162 YENIIFHAYVKPPIPVTSYRYETTGIRPEHLRDAIPLKQVQRKIQDFLCNGEPMWKIRPR 221
+ I+ YVKP VT YR +GIRPEHL+ K VQ+++ D L NG
Sbjct: 233 FGKCIYDKYVKPTEEVTDYRTAVSGIRPEHLKTGEDFKTVQKEVADIL-NG--------- 282
Query: 222 GSRARILVGHGLDHDLDRLQVEYPAIMTRDTAKYPPLMKTSKLSN-SLKYLTQAYLGYDI 280
RILVGH L +DL L +++P RDT KY P + K + SLK L L +
Sbjct: 283 ----RILVGHALHNDLKVLFLDHPKKKIRDTQKYKPFRQRVKNARPSLKLLCDRLLDVQV 338
Query: 281 QIGIQDPYDDCVATMRLYMRMKSQ 304
Q D A MRLY K +
Sbjct: 339 QTSEHCSIQDAQAAMRLYTLEKKE 362
>FB|FBgn0036405 [details] [associations]
symbol:CG6833 species:7227 "Drosophila melanogaster"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 EMBL:AE014296 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:AY060760 RefSeq:NP_001189105.1
RefSeq:NP_648689.1 UniGene:Dm.3871 SMR:Q9VUC3 IntAct:Q9VUC3
STRING:Q9VUC3 EnsemblMetazoa:FBtr0075774 EnsemblMetazoa:FBtr0302433
GeneID:39559 KEGG:dme:Dmel_CG6833 UCSC:CG6833-RA
FlyBase:FBgn0036405 InParanoid:Q9VUC3 OMA:GQEIQTG OrthoDB:EOG4PK0R4
GenomeRNAi:39559 NextBio:814273 Uniprot:Q9VUC3
Length = 290
Score = 213 (80.0 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 58/171 (33%), Positives = 88/171 (51%)
Query: 133 QVVAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIRPEHL 192
+++A+ C+MV RV I++ +++ YVKP VT YR +GIRP+ +
Sbjct: 116 RILAMDCEMVGVGHNTRDDMLARVSIVNRMGHVLLDKYVKPRKEVTDYRTSVSGIRPQDI 175
Query: 193 RDAIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIMTRDT 252
+ VQ ++ L +G RILVGHGL +DL L + +P RDT
Sbjct: 176 ANGEDFAAVQNEVMK-LIHG-------------RILVGHGLRNDLAVLGIRHPFHDIRDT 221
Query: 253 AKYPPLMK--TSKLSNSLKYLTQAYLGYDIQIGIQDPYDDCVATMRLYMRM 301
+ Y PL K ++ + SLK LT+A LG +IQ G + +D A M +Y R+
Sbjct: 222 SHYKPLCKLISNTHTPSLKRLTKAVLGQEIQTGEHNSVEDARAAMGIYNRV 272
>UNIPROTKB|F1NQP7 [details] [associations]
symbol:Gga.48606 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 OMA:QKEVAEM EMBL:AADN02026478
IPI:IPI00594596 Ensembl:ENSGALT00000005016 Uniprot:F1NQP7
Length = 414
Score = 229 (85.7 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 68/204 (33%), Positives = 92/204 (45%)
Query: 102 VSSATTGLNARLANLGVRDSLTIDNTHTRDPQVVAIACKMVXXXXXXXXXXCGRVCIIDE 161
V+ GL A + V L + + + VA+ C+MV RV I++
Sbjct: 208 VARRKLGLEAGQSKQSVEQVLVKEKSSGGLTRAVAMDCEMVGVGPSGEDSIVARVSIVNL 267
Query: 162 YENIIFHAYVKPPIPVTSYRYETTGIRPEHLRDAIPLKQVQRKIQDFLCNGEPMWKIRPR 221
+ I+ YVKP VT YR +GIRPEHL+ K VQ+++ D L NG
Sbjct: 268 FGKCIYDKYVKPTEEVTDYRTAVSGIRPEHLKTGEDFKTVQKEVADIL-NG--------- 317
Query: 222 GSRARILVGHGLDHDLDRLQVEYPAIMTRDTAKYPPLMKTSKLSN-SLKYLTQAYLGYDI 280
RILVGH L +DL L +++P RDT KY P + K + SLK L L +
Sbjct: 318 ----RILVGHALHNDLKVLFLDHPKKKIRDTQKYKPFRQRVKNARPSLKLLCDRLLDVQV 373
Query: 281 QIGIQDPYDDCVATMRLYMRMKSQ 304
Q D A MRLY K +
Sbjct: 374 QTSEHCSIQDAQAAMRLYTLEKKE 397
>RGD|1306220 [details] [associations]
symbol:Rexo4 "REX4, RNA exonuclease 4 homolog (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA;ISO]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
RGD:1306220 GO:GO:0005730 GO:GO:0003676 GO:GO:0004527
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 KO:K01175 CTD:57109
HOGENOM:HOG000231626 HOVERGEN:HBG000999 OrthoDB:EOG4VX263
EMBL:BC161820 IPI:IPI00563200 RefSeq:NP_001029056.1
UniGene:Rn.116879 Ensembl:ENSRNOT00000042289 GeneID:311826
KEGG:rno:311826 UCSC:RGD:1306220 NextBio:664229
Genevestigator:B1WBN4 Uniprot:B1WBN4
Length = 409
Score = 226 (84.6 bits), Expect = 9.4e-17, P = 9.4e-17
Identities = 62/195 (31%), Positives = 95/195 (48%)
Query: 133 QVVAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIRPEHL 192
+ +A+ C+MV RV I+++Y ++ YVKP PVT YR +GIRPE+L
Sbjct: 229 KALALDCEMVGVGPKGEESIAARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRPENL 288
Query: 193 RDAIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIMTRDT 252
+ + V++++ L + RILVGH L +DL L +E+P RDT
Sbjct: 289 KQGEEFEVVKKEVAAML--------------KGRILVGHALRNDLKVLFLEHPKKKIRDT 334
Query: 253 AKYPPLMKTSKLSN-SLKYLTQAYLGYDIQIGIQDPYDDCVATMRLYMRMKS--QAHKRE 309
K+ P K + SLK L++ LG +Q D A MRLY+ +K ++ +
Sbjct: 335 QKFKPFRSLVKSARPSLKQLSEKILGLRVQQAEHCSVQDAQAAMRLYIMVKRKWESIAAD 394
Query: 310 DYPLASDPQNRNNYA 324
A+ P + N YA
Sbjct: 395 RRAPAATPHHCNEYA 409
>MGI|MGI:2684957 [details] [associations]
symbol:Rexo4 "REX4, RNA exonuclease 4 homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 MGI:MGI:2684957
GO:GO:0005730 GO:GO:0003676 GO:GO:0004527 GO:GO:0090305
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 KO:K01175 CTD:57109
HOGENOM:HOG000231626 HOVERGEN:HBG000999 EMBL:AK079733 EMBL:AK138894
EMBL:BC060147 IPI:IPI00407108 RefSeq:NP_997117.2 UniGene:Mm.291874
ProteinModelPortal:Q6PAQ4 SMR:Q6PAQ4 PhosphoSite:Q6PAQ4
PaxDb:Q6PAQ4 PRIDE:Q6PAQ4 DNASU:227656 Ensembl:ENSMUST00000114020
GeneID:227656 KEGG:mmu:227656 UCSC:uc008iwn.1 InParanoid:Q6PAQ4
OMA:EWESIAR ChiTaRS:REXO4 NextBio:378724 Bgee:Q6PAQ4
CleanEx:MM_REXO4 Genevestigator:Q6PAQ4
GermOnline:ENSMUSG00000052406 Uniprot:Q6PAQ4
Length = 432
Score = 226 (84.6 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 64/194 (32%), Positives = 97/194 (50%)
Query: 133 QVVAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIRPEHL 192
+ +A+ C+MV RV I+++Y ++ YVKP PVT YR +GIRPE+L
Sbjct: 252 KALALDCEMVGVGPKGEESIAARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRPENL 311
Query: 193 RDAIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIMTRDT 252
+ + V++++ + L + RILVGH L +DL L +++P RDT
Sbjct: 312 KQGEEFEVVKKEVAEML--------------KGRILVGHALHNDLKVLFLDHPKKKIRDT 357
Query: 253 AKYPPLMKTSKLSN-SLKYLTQAYLGYDIQIGIQDPYDDCVATMRLYMRMK-----SQAH 306
K+ P K SLK L++ LG +Q D A MRLY+ +K S A+
Sbjct: 358 QKFKPFRSRVKSGRPSLKRLSEKILGIRVQQAEHCSIQDAQAAMRLYVMVKREWESSTAN 417
Query: 307 KREDYPLASDPQNR 320
+R P A+ PQ+R
Sbjct: 418 RRA--PAAT-PQHR 428
>POMBASE|SPBC1604.09c [details] [associations]
symbol:SPBC1604.09c "exoribonuclease Rex4 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA] [GO:0006364
"rRNA processing" evidence=ISO] [GO:0008408 "3'-5' exonuclease
activity" evidence=ISO] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 PomBase:SPBC1604.09c Pfam:PF00929 GO:GO:0005730
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003676
eggNOG:COG0847 HOGENOM:HOG000182422 InterPro:IPR013520
SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0006364 KO:K01175 OMA:NDIPESQ
PIR:T39505 RefSeq:NP_596631.1 ProteinModelPortal:O94375
STRING:O94375 EnsemblFungi:SPBC1604.09c.1 GeneID:2540203
KEGG:spo:SPBC1604.09c OrthoDB:EOG4TB7M4 NextBio:20801335
Uniprot:O94375
Length = 260
Score = 205 (77.2 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 53/171 (30%), Positives = 87/171 (50%)
Query: 135 VAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIRPEHLRD 194
+A+ C+MV RV I++ + ++++ YV+P VT +R +G++ H+RD
Sbjct: 94 IAMDCEMVGVADDMSVLA--RVSIVNYHGHVVYDTYVRPKEKVTDWRTWVSGVKSFHMRD 151
Query: 195 AIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIMTRDTAK 254
A ++VQ ++ L N R+LVGH + +DL L + +P M RDT++
Sbjct: 152 APSFEKVQAEVAKILDN--------------RVLVGHAVHNDLKVLLLSHPRRMIRDTSR 197
Query: 255 YPPLMKTSK-LSNSLKYLTQAYLGYDIQIGIQDPYDDCVATMRLYMRMKSQ 304
+ K +K + LK L + LG DIQ G D ATM LY ++K +
Sbjct: 198 FSGYRKLAKGRTPGLKKLAEVILGRDIQSGQHSSVQDAQATMELYKKVKKE 248
>ZFIN|ZDB-GENE-120215-216 [details] [associations]
symbol:si:ch73-209e20.4 "si:ch73-209e20.4"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
ZFIN:ZDB-GENE-120215-216 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00520000055542
KO:K01175 EMBL:FP243383 IPI:IPI00613534 RefSeq:XP_002665913.1
ProteinModelPortal:F1QJP9 Ensembl:ENSDART00000121769
GeneID:100333127 KEGG:dre:100333127 Bgee:F1QJP9 Uniprot:F1QJP9
Length = 418
Score = 222 (83.2 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 55/173 (31%), Positives = 86/173 (49%)
Query: 133 QVVAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIRPEHL 192
+ VA+ C+MV RV +++ + I+ YVKP VT YR +GIRP+ +
Sbjct: 232 RAVAMDCEMVGVGYKGEDSILARVSLVNHFGKCIYDKYVKPTEKVTDYRTAVSGIRPDDI 291
Query: 193 RDAIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIMTRDT 252
++ +K VQ+++ L + RILVGH + +DL L +++P M RDT
Sbjct: 292 KNGEDIKTVQKEVAQIL--------------KGRILVGHAIHNDLKILLLDHPKKMIRDT 337
Query: 253 AKYPPLMKTSKLSN-SLKYLTQAYLGYDIQIGIQDPYDDCVATMRLYMRMKSQ 304
+Y P + K S +L+ L + L +Q G D ATMRLY ++ Q
Sbjct: 338 QRYKPFRQKVKSSRPALRNLCRQILNVQVQQGEHSSVQDAQATMRLYTMVRKQ 390
>WB|WBGene00012465 [details] [associations]
symbol:Y17G7B.12 species:6239 "Caenorhabditis elegans"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 eggNOG:COG0847 HOGENOM:HOG000182422
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00520000055542
EMBL:AL023828 PIR:T26504 RefSeq:NP_496560.1
ProteinModelPortal:Q9XXI3 SMR:Q9XXI3 STRING:Q9XXI3 PaxDb:Q9XXI3
EnsemblMetazoa:Y17G7B.12.1 EnsemblMetazoa:Y17G7B.12.2 GeneID:174842
KEGG:cel:CELE_Y17G7B.12 UCSC:Y17G7B.12 CTD:174842
WormBase:Y17G7B.12 InParanoid:Q9XXI3 OMA:TAKCTIL NextBio:885742
Uniprot:Q9XXI3
Length = 269
Score = 201 (75.8 bits), Expect = 7.9e-16, P = 7.9e-16
Identities = 56/174 (32%), Positives = 86/174 (49%)
Query: 133 QVVAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIRPEHL 192
+V+AI C+ V R+ I++E I++ +VKP VT +R +GIRPE++
Sbjct: 101 KVIAIDCEYVGAGMGGTTDILARISIVNELGKIVYDKFVKPTEKVTDFRTAVSGIRPENM 160
Query: 193 RDAIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIMTRDT 252
AIP + Q ++ L +G RI++GH + +D L++ + +TRDT
Sbjct: 161 IKAIPFDRAQTEVSK-LIDG-------------RIVIGHAVHNDFRVLKLNHIRKLTRDT 206
Query: 253 AKYPPL--MKTSKLSNSLKYLTQAYLGYDIQIGIQDPYDDCVATMRLYMRMKSQ 304
AK L M + SLK L + LG +IQ G D D +RLY +K Q
Sbjct: 207 AKCTILKNMANHHGTPSLKKLAKEVLGIEIQRGEHDSITDARVALRLYEAVKKQ 260
>ZFIN|ZDB-GENE-070928-8 [details] [associations]
symbol:isg20l2 "interferon stimulated exonuclease
gene 20-like 2" species:7955 "Danio rerio" [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
ZFIN:ZDB-GENE-070928-8 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
eggNOG:COG0847 HOGENOM:HOG000182422 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00520000055542 CTD:81875
OrthoDB:EOG4H4641 EMBL:AL954306 EMBL:BC152518 IPI:IPI00931450
RefSeq:NP_001096663.1 UniGene:Dr.87096 Ensembl:ENSDART00000109664
GeneID:558447 KEGG:dre:558447 HOVERGEN:HBG095874 InParanoid:A3KH10
NextBio:20882472 Uniprot:A3KH10
Length = 321
Score = 209 (78.6 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 71/220 (32%), Positives = 101/220 (45%)
Query: 89 PNARRLHQERCQMVSSATTGLNARLANLGVRDSLTIDNTHTRDP---QVVAIACKMVXXX 145
PN+ Q S +T L AN+ RD LT R P + +A+ C+MV
Sbjct: 89 PNSTYEPSSSAQAYSRTSTYLFPSHANISQRD-LTQRMAVPRPPGPIKYLALDCEMVGTG 147
Query: 146 XXXXXXXCGRVCIIDEYE-NIIFHAYVKPPIPVTSYRYETTGIRPEHLRDAIPLKQVQRK 204
R C I Y+ ++++ YVKP PVT YR +GIR + L A P Q++
Sbjct: 148 PKGAQSELAR-CSIVSYDGDVVYDKYVKPINPVTDYRTRWSGIRRQDLLHATPFYHAQKE 206
Query: 205 IQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIMTRDTAKYPPLMKTS-- 262
I + +++VGH + +D L+ +PA TRDT++ P L + +
Sbjct: 207 IVKIITG--------------KVVVGHAIHNDFKALKYFHPAFQTRDTSRIPLLNEKAGF 252
Query: 263 --KLSNSLKYLTQAYLGYDIQIGIQ--DPYDDCVATMRLY 298
K SLK LTQA L DIQ G + +D ATM LY
Sbjct: 253 PEKQCVSLKKLTQAILKRDIQTGYRGHSSVEDAKATMELY 292
>UNIPROTKB|I3L751 [details] [associations]
symbol:REXO4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0005730 GO:GO:0003676
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 OMA:QKEVAEM EMBL:FP565513
Ensembl:ENSSSCT00000028732 Uniprot:I3L751
Length = 421
Score = 213 (80.0 bits), Expect = 4.3e-15, P = 4.3e-15
Identities = 59/185 (31%), Positives = 87/185 (47%)
Query: 133 QVVAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIRPEHL 192
+ +A+ C+MV RV +++++ ++ YVKP PVT YR +GIRPE+L
Sbjct: 241 RALALDCEMVGVGPQGDESMLARVSLVNQFGKCVYDKYVKPTQPVTDYRTAVSGIRPENL 300
Query: 193 RDAIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIMTRDT 252
+ VQ+++ L + RILVGH L +DL L + +P RDT
Sbjct: 301 AQGEEFEIVQKEVAALL--------------KGRILVGHALHNDLKVLFLGHPKKKVRDT 346
Query: 253 AKYPPLMKTSKLSN-SLKYLTQAYLGYDIQIGIQDPYDDCVATMRLYMRMKSQAHK--RE 309
KY P K SLK L + LG +Q D A MRLY+ +K + R+
Sbjct: 347 QKYRPFRSQVKSGRPSLKLLAEKILGLPVQQAEHCSVQDAQAAMRLYISVKREWESLARD 406
Query: 310 DYPLA 314
+P A
Sbjct: 407 RHPSA 411
>UNIPROTKB|E2R7T9 [details] [associations]
symbol:REXO4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 OMA:QKEVAEM EMBL:AAEX03006772
Ensembl:ENSCAFT00000035775 Uniprot:E2R7T9
Length = 447
Score = 210 (79.0 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 52/150 (34%), Positives = 75/150 (50%)
Query: 133 QVVAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIRPEHL 192
+ +A+ C+MV RV I+++Y ++ YVKP PVT YR +GIRPE+L
Sbjct: 244 RALAMDCEMVGAGPKGEESVAARVSIVNQYGKCVYDKYVKPTQPVTDYRTAVSGIRPENL 303
Query: 193 RDAIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIMTRDT 252
+ + VQ+++ D L + RILVGH L +DL L +++P RDT
Sbjct: 304 KQGEKFEVVQKEVADML--------------KGRILVGHALHNDLKVLFLDHPKKKIRDT 349
Query: 253 AKYPPLMKTSKLSN-SLKYLTQAYLGYDIQ 281
KY P K SLK L + LG +Q
Sbjct: 350 QKYKPFKSQVKSGRPSLKLLAERILGIQVQ 379
>UNIPROTKB|E2QS77 [details] [associations]
symbol:ISG20L2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005634
GO:GO:0003676 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 CTD:81875 OMA:GTGPKGH
EMBL:AAEX03005314 RefSeq:XP_547530.2 Ensembl:ENSCAFT00000026521
GeneID:490409 KEGG:cfa:490409 NextBio:20863435 Uniprot:E2QS77
Length = 348
Score = 204 (76.9 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 57/201 (28%), Positives = 95/201 (47%)
Query: 120 DSLTIDNTHTRDPQVVAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTS 179
D+ T ++VAI C+MV R I++ + ++++ Y+ PP +
Sbjct: 160 DNKCSGTTQKTPKKMVAIDCEMVGTGPKGHVSSLARCSIVNYHGDVLYDEYILPPCHIVD 219
Query: 180 YRYETTGIRPEHLRDAIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDR 239
YR +GIR +H+ +A P K + +I L +I+VGH + +D
Sbjct: 220 YRTRWSGIRKQHMVNATPFKVARGQILKILTG--------------KIVVGHAIHNDFKA 265
Query: 240 LQVEYPAIMTRDTAKYPPLMKTS----KLSNSLKYLTQAYLGYDIQIGIQ--DPYDDCVA 293
LQ +P +TRDT+ PPL + + + SLK LT+ L DIQ+G +D A
Sbjct: 266 LQYFHPKSLTRDTSHIPPLNRKADCPENATMSLKSLTKKLLNRDIQVGKSGHSSVEDAQA 325
Query: 294 TMRLY--MRMKSQAHKREDYP 312
TM LY + ++ + H ++ P
Sbjct: 326 TMELYKLVEVEWEQHLAQNPP 346
>UNIPROTKB|F1SRT3 [details] [associations]
symbol:AEN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042771 "intrinsic apoptotic signaling pathway in
response to DNA damage by p53 class mediator" evidence=IEA]
[GO:0010212 "response to ionizing radiation" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005654
GO:GO:0005730 GO:GO:0042771 GO:GO:0003676 GO:GO:0010212
GO:GO:0004527 OMA:HKRKSRQ InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:FP017226 RefSeq:XP_003121906.1
UniGene:Ssc.43796 Ensembl:ENSSSCT00000005624 GeneID:100522657
KEGG:ssc:100522657 Uniprot:F1SRT3
Length = 325
Score = 202 (76.2 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 58/210 (27%), Positives = 97/210 (46%)
Query: 135 VAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIRPEHLRD 194
VAI C+MV R ++ Y ++++ Y++P +P+ YR +GI +H+R
Sbjct: 111 VAIDCEMVGTGPRGRVSELARCSVVSYYGDVLYDKYIRPEMPIVDYRTRWSGITRQHMRK 170
Query: 195 AIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIMTRDTAK 254
AIP + Q++I L + +++VGH L +D L+ +P TRDT
Sbjct: 171 AIPFQVAQKEILKLL--------------KGKVVVGHALHNDFQALKYVHPRGQTRDTTY 216
Query: 255 YPPLMKTSKLSN----SLKYLTQAYLGYDIQIGIQ--DPYDDCVATMRLYMRMKSQAHKR 308
P L+ L SLK L L IQ+G +D V M LY ++ Q ++
Sbjct: 217 VPNLLSQPGLHTRTRVSLKDLALQLLHKKIQVGQHGHSSVEDAVTAMELYRLVEVQWEQQ 276
Query: 309 EDYPLASDPQNRNNYASWRQTELERMSPEE 338
E S P++R +S T++E+ ++
Sbjct: 277 EASSPRSHPEDREPDSS---TDMEQYMEDQ 303
>UNIPROTKB|Q9H9L3 [details] [associations]
symbol:ISG20L2 "Interferon-stimulated 20 kDa
exonuclease-like 2" species:9606 "Homo sapiens" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 GO:GO:0005634 GO:GO:0005730 GO:GO:0003676
GO:GO:0042254 GO:GO:0004527 GO:GO:0090305 eggNOG:COG0847
HOGENOM:HOG000182422 InterPro:IPR013520 SUPFAM:SSF53098
EMBL:CH471121 KO:K01175 EMBL:AL590666 CTD:81875 HOVERGEN:HBG107986
OMA:GTGPKGH OrthoDB:EOG4H4641 EMBL:AY391837 EMBL:AK022733
EMBL:BC000575 IPI:IPI00008963 RefSeq:NP_112242.1 UniGene:Hs.301904
ProteinModelPortal:Q9H9L3 IntAct:Q9H9L3 MINT:MINT-1457372
STRING:Q9H9L3 PhosphoSite:Q9H9L3 DMDM:42559527 SWISS-2DPAGE:Q9H9L3
PaxDb:Q9H9L3 PeptideAtlas:Q9H9L3 PRIDE:Q9H9L3 DNASU:81875
Ensembl:ENST00000313146 Ensembl:ENST00000368219 GeneID:81875
KEGG:hsa:81875 UCSC:uc001fps.1 GeneCards:GC01M156691
HGNC:HGNC:25745 HPA:HPA028005 MIM:611930 neXtProt:NX_Q9H9L3
PharmGKB:PA142671650 InParanoid:Q9H9L3 PhylomeDB:Q9H9L3
ChiTaRS:ISG20L2 GenomeRNAi:81875 NextBio:72218 Bgee:Q9H9L3
CleanEx:HS_ISG20L2 Genevestigator:Q9H9L3 GermOnline:ENSG00000143319
Uniprot:Q9H9L3
Length = 353
Score = 199 (75.1 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 53/172 (30%), Positives = 84/172 (48%)
Query: 133 QVVAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIRPEHL 192
++VAI C+MV R I++ ++++ Y+ PP + YR +GIR +H+
Sbjct: 178 KMVAIDCEMVGTGPKGHVSSLARCSIVNYNGDVLYDEYILPPCHIVDYRTRWSGIRKQHM 237
Query: 193 RDAIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIMTRDT 252
+A P K + +I L +I+VGH + +D LQ +P +TRDT
Sbjct: 238 VNATPFKIARGQILKILTG--------------KIVVGHAIHNDFKALQYFHPKSLTRDT 283
Query: 253 AKYPPLMKTS----KLSNSLKYLTQAYLGYDIQIGIQ--DPYDDCVATMRLY 298
+ PPL + + + SLK+LT+ L DIQ+G +D ATM LY
Sbjct: 284 SHIPPLNRKADCPENATMSLKHLTKKLLNRDIQVGKSGHSSVEDAQATMELY 335
>UNIPROTKB|Q8WTP8 [details] [associations]
symbol:AEN "Apoptosis-enhancing nuclease" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0010212 "response to ionizing radiation"
evidence=IDA] [GO:0004527 "exonuclease activity" evidence=IDA]
[GO:0042771 "intrinsic apoptotic signaling pathway in response to
DNA damage by p53 class mediator" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0005654 GO:GO:0005730
GO:GO:0042771 GO:GO:0003676 GO:GO:0010212 GO:GO:0004527
EMBL:AF327352 EMBL:AC013489 EMBL:CH471101 EMBL:BC005164
EMBL:BC014407 EMBL:BC020988 EMBL:AK022546 IPI:IPI00074083
IPI:IPI00141525 RefSeq:NP_073604.3 UniGene:Hs.436102
ProteinModelPortal:Q8WTP8 SMR:Q8WTP8 STRING:Q8WTP8
PhosphoSite:Q8WTP8 DMDM:296434390 PRIDE:Q8WTP8 DNASU:64782
Ensembl:ENST00000332810 Ensembl:ENST00000379231 GeneID:64782
KEGG:hsa:64782 UCSC:uc002bmt.2 CTD:64782 GeneCards:GC15P089164
H-InvDB:HIX0012556 HGNC:HGNC:25722 HPA:HPA048599 MIM:610177
neXtProt:NX_Q8WTP8 PharmGKB:PA162375720 eggNOG:COG0847
HOGENOM:HOG000182422 HOVERGEN:HBG100435 OMA:HKRKSRQ
OrthoDB:EOG4P8FJM PhylomeDB:Q8WTP8 GenomeRNAi:64782 NextBio:66818
ArrayExpress:Q8WTP8 Bgee:Q8WTP8 CleanEx:HS_AEN
Genevestigator:Q8WTP8 InterPro:IPR013520 SUPFAM:SSF53098
Uniprot:Q8WTP8
Length = 325
Score = 196 (74.1 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 56/210 (26%), Positives = 96/210 (45%)
Query: 135 VAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIRPEHLRD 194
VAI C+MV R I+ + N+++ Y++P +P+ YR +GI +H+R
Sbjct: 111 VAIDCEMVGTGPRGRVSELARCSIVSYHGNVLYDKYIRPEMPIADYRTRWSGITRQHMRK 170
Query: 195 AIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIMTRDTAK 254
A+P + Q++I L + +++VGH L +D L+ +P TRDT
Sbjct: 171 AVPFQVAQKEILKLL--------------KGKVVVGHALHNDFQALKYVHPRSQTRDTTY 216
Query: 255 YPPLMKTSKLSN----SLKYLTQAYLGYDIQIGIQ--DPYDDCVATMRLYMRMKSQAHKR 308
P + L SLK L L IQ+G +D M LY ++ Q ++
Sbjct: 217 VPNFLSEPGLHTRARVSLKDLALQLLHKKIQVGQHGHSSVEDATTAMELYRLVEVQWEQQ 276
Query: 309 EDYPLASDPQNRNNYASWRQTELERMSPEE 338
E L + P++R +S T++E+ ++
Sbjct: 277 EARSLWTCPEDREPDSS---TDMEQYMEDQ 303
>UNIPROTKB|F1N5B5 [details] [associations]
symbol:REXO4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0005730 GO:GO:0003676
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 OMA:QKEVAEM EMBL:DAAA02032345
EMBL:DAAA02032346 IPI:IPI01000627 Ensembl:ENSBTAT00000026283
Uniprot:F1N5B5
Length = 402
Score = 199 (75.1 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 53/171 (30%), Positives = 79/171 (46%)
Query: 133 QVVAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIRPEHL 192
+ +A+ C+MV RV +++++ ++ +VKP PVT YR +G+RP L
Sbjct: 224 KALAMDCEMVGVGPEGEESVVARVSLVNQHGRCVYDKHVKPTQPVTDYRTAVSGVRPADL 283
Query: 193 RDAIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIMTRDT 252
+ VQR++ + L + RILVGH L +DL L + +P RDT
Sbjct: 284 AQGEEFEVVQREVAELL--------------KGRILVGHALHNDLKALFLGHPKKKIRDT 329
Query: 253 AKYPPLMKTSKLSN-SLKYLTQAYLGYDIQIGIQDPYDDCVATMRLYMRMK 302
KY P K SLK L + LG +Q D MRLY+ +K
Sbjct: 330 QKYKPFRTQVKSGRPSLKLLAERILGIQVQQAEHCSVQDAQVAMRLYVLVK 380
>UNIPROTKB|F1MZX4 [details] [associations]
symbol:LOC614749 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0042771 "intrinsic apoptotic signaling pathway in
response to DNA damage by p53 class mediator" evidence=IEA]
[GO:0010212 "response to ionizing radiation" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005654
GO:GO:0005730 GO:GO:0042771 GO:GO:0003676 GO:GO:0010212
GO:GO:0004527 OMA:HKRKSRQ InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:DAAA02052106 IPI:IPI00714615
Ensembl:ENSBTAT00000023454 Uniprot:F1MZX4
Length = 325
Score = 194 (73.4 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 57/210 (27%), Positives = 97/210 (46%)
Query: 135 VAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIRPEHLRD 194
VAI C+MV R ++ + +++ Y++P +P+ YR +GI +H+R
Sbjct: 111 VAIDCEMVGTGPRGRVSELARCSVVSYHGEVLYDKYIRPEMPIVDYRTRWSGITRQHMRK 170
Query: 195 AIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIMTRDTAK 254
AIP + Q++I L + +++VGH L +D L+ +P TRDT
Sbjct: 171 AIPFQVAQKEILKLL--------------KGKVVVGHALHNDFQALKYIHPRGQTRDTTS 216
Query: 255 YPPLMKTSKLS--N--SLKYLTQAYLGYDIQIGIQ--DPYDDCVATMRLYMRMKSQAHKR 308
P L+ L N SLK L L IQ+G +D V M LY ++ Q ++
Sbjct: 217 VPSLLSQPGLHVRNRVSLKDLALQLLHKKIQVGQHGHSSVEDAVTAMELYRLVEVQWEQQ 276
Query: 309 EDYPLASDPQNRNNYASWRQTELERMSPEE 338
L + P++R +S T++E+ ++
Sbjct: 277 VASSLRAPPEDREPDSS---TDMEQYMEDQ 303
>UNIPROTKB|J9PA78 [details] [associations]
symbol:AEN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 CTD:64782 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00520000055542 EMBL:AAEX03002316
EMBL:AAEX03002317 RefSeq:XP_545846.2 Ensembl:ENSCAFT00000047692
GeneID:488728 KEGG:cfa:488728 Uniprot:J9PA78
Length = 324
Score = 191 (72.3 bits), Expect = 7.0e-13, P = 7.0e-13
Identities = 64/262 (24%), Positives = 114/262 (43%)
Query: 88 GPNARRLHQERCQMVSSATTGLNARLANL--GV---RDSLTIDNTHTRDPQVVAIACKMV 142
GP+ + E + ++G+ RL N G R ++ R + VAI C+MV
Sbjct: 60 GPSPLPMPSEALPGTEATSSGMQ-RLRNEPGGASWSRKPTPRESAGPRPSKCVAIDCEMV 118
Query: 143 XXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIRPEHLRDAIPLKQVQ 202
R ++ + ++++ Y++P +P+ YR +G+ +H+R AIP + Q
Sbjct: 119 GTGPRGRVSELARCSVVSYHGDVLYDKYIRPEMPIVDYRTRWSGVTRQHMRKAIPFQVAQ 178
Query: 203 RKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIMTRDTAKYPPLMKTS 262
++I L + +++VGH L +D L+ +P TRDT P L+
Sbjct: 179 KEILKLL--------------KGKVVVGHALHNDFQALKYVHPRSQTRDTTYVPNLLHQP 224
Query: 263 KLSN----SLKYLTQAYLGYDIQIGIQ--DPYDDCVATMRLYMRMKSQAHKREDYPLASD 316
L SLK L L IQ G +D M LY ++ Q +++ L
Sbjct: 225 GLHTRTRVSLKDLALQLLHKKIQAGQHGHSSVEDATTAMELYRLVEVQWEQQQASSLPPR 284
Query: 317 PQNRNNYASWRQTELERMSPEE 338
P++R +S T++E+ ++
Sbjct: 285 PEDREPDSS---TDMEQYMEDQ 303
>UNIPROTKB|H9L3P1 [details] [associations]
symbol:H9L3P1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:AADN02034596 EMBL:AADN02034597
Ensembl:ENSGALT00000040830 Uniprot:H9L3P1
Length = 327
Score = 191 (72.3 bits), Expect = 7.4e-13, P = 7.4e-13
Identities = 55/179 (30%), Positives = 92/179 (51%)
Query: 133 QVVAIACKMVXXXXXXXXXXCGRVCIIDEYE-NIIFHAYVKPPIPVTSYRYETTGIRPEH 191
++VAI C+MV R C I YE ++++ +YV+P P+ YR +GIR +H
Sbjct: 150 KLVAIDCEMVGTGPGGCTSSLAR-CSIVGYEGDVLYDSYVRPTEPIVDYRTRWSGIRKKH 208
Query: 192 LRDAIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIMTRD 251
+ +A+P + QR+I L +G +++VGH + +D L+ +P +TRD
Sbjct: 209 MVNAVPFCKAQREILKIL-SG-------------KVVVGHAVHNDFKALKYSHPKELTRD 254
Query: 252 TAKYPPLMKTS----KLSNSLKYLTQAYLGYDIQIGIQD--PYDDCVATMRLYMRMKSQ 304
T+K P L + ++ SLK L + L DIQ+G +D TM LY ++++
Sbjct: 255 TSKIPLLNQKGGFPENVAISLKRLAKELLHKDIQVGKSGHCSVEDARTTMELYKVVEAE 313
>UNIPROTKB|H9L3P2 [details] [associations]
symbol:H9L3P2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:AADN02034596 EMBL:AADN02034597
Ensembl:ENSGALT00000040831 OMA:PTEPIVD Uniprot:H9L3P2
Length = 328
Score = 191 (72.3 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 55/179 (30%), Positives = 92/179 (51%)
Query: 133 QVVAIACKMVXXXXXXXXXXCGRVCIIDEYE-NIIFHAYVKPPIPVTSYRYETTGIRPEH 191
++VAI C+MV R C I YE ++++ +YV+P P+ YR +GIR +H
Sbjct: 151 KLVAIDCEMVGTGPGGCTSSLAR-CSIVGYEGDVLYDSYVRPTEPIVDYRTRWSGIRKKH 209
Query: 192 LRDAIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIMTRD 251
+ +A+P + QR+I L +G +++VGH + +D L+ +P +TRD
Sbjct: 210 MVNAVPFCKAQREILKIL-SG-------------KVVVGHAVHNDFKALKYSHPKELTRD 255
Query: 252 TAKYPPLMKTS----KLSNSLKYLTQAYLGYDIQIGIQD--PYDDCVATMRLYMRMKSQ 304
T+K P L + ++ SLK L + L DIQ+G +D TM LY ++++
Sbjct: 256 TSKIPLLNQKGGFPENVAISLKRLAKELLHKDIQVGKSGHCSVEDARTTMELYKVVEAE 314
>UNIPROTKB|F1PWV6 [details] [associations]
symbol:AEN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042771 "intrinsic apoptotic signaling
pathway in response to DNA damage by p53 class mediator"
evidence=IEA] [GO:0010212 "response to ionizing radiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
GO:GO:0005654 GO:GO:0005730 GO:GO:0042771 GO:GO:0003676
GO:GO:0010212 GO:GO:0004527 OMA:HKRKSRQ InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00520000055542 EMBL:AAEX03002316
EMBL:AAEX03002317 Ensembl:ENSCAFT00000018286 Uniprot:F1PWV6
Length = 336
Score = 191 (72.3 bits), Expect = 8.3e-13, P = 8.3e-13
Identities = 64/262 (24%), Positives = 114/262 (43%)
Query: 88 GPNARRLHQERCQMVSSATTGLNARLANL--GV---RDSLTIDNTHTRDPQVVAIACKMV 142
GP+ + E + ++G+ RL N G R ++ R + VAI C+MV
Sbjct: 60 GPSPLPMPSEALPGTEATSSGMQ-RLRNEPGGASWSRKPTPRESAGPRPSKCVAIDCEMV 118
Query: 143 XXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIRPEHLRDAIPLKQVQ 202
R ++ + ++++ Y++P +P+ YR +G+ +H+R AIP + Q
Sbjct: 119 GTGPRGRVSELARCSVVSYHGDVLYDKYIRPEMPIVDYRTRWSGVTRQHMRKAIPFQVAQ 178
Query: 203 RKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIMTRDTAKYPPLMKTS 262
++I L + +++VGH L +D L+ +P TRDT P L+
Sbjct: 179 KEILKLL--------------KGKVVVGHALHNDFQALKYVHPRSQTRDTTYVPNLLHQP 224
Query: 263 KLSN----SLKYLTQAYLGYDIQIGIQ--DPYDDCVATMRLYMRMKSQAHKREDYPLASD 316
L SLK L L IQ G +D M LY ++ Q +++ L
Sbjct: 225 GLHTRTRVSLKDLALQLLHKKIQAGQHGHSSVEDATTAMELYRLVEVQWEQQQASSLPPR 284
Query: 317 PQNRNNYASWRQTELERMSPEE 338
P++R +S T++E+ ++
Sbjct: 285 PEDREPDSS---TDMEQYMEDQ 303
>MGI|MGI:2140076 [details] [associations]
symbol:Isg20l2 "interferon stimulated exonuclease gene
20-like 2" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 MGI:MGI:2140076
GO:GO:0005730 GO:GO:0003676 GO:GO:0042254 GO:GO:0004527
GO:GO:0090305 eggNOG:COG0847 HOGENOM:HOG000182422
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00520000055542
KO:K01175 CTD:81875 HOVERGEN:HBG107986 OrthoDB:EOG4H4641
EMBL:AK053778 EMBL:AK155979 EMBL:BC098326 IPI:IPI00222565
RefSeq:NP_808331.1 UniGene:Mm.45744 ProteinModelPortal:Q3U1G5
SMR:Q3U1G5 PhosphoSite:Q3U1G5 PaxDb:Q3U1G5 PRIDE:Q3U1G5
Ensembl:ENSMUST00000055984 GeneID:229504 KEGG:mmu:229504
UCSC:uc008ptj.1 InParanoid:Q4KMV7 NextBio:379467 Bgee:Q3U1G5
CleanEx:MM_ISG20L2 Genevestigator:Q3U1G5 Uniprot:Q3U1G5
Length = 368
Score = 191 (72.3 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 54/188 (28%), Positives = 95/188 (50%)
Query: 133 QVVAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIRPEHL 192
++VAI C+MV R I++ ++++ YV PP + +YR +GIR H+
Sbjct: 193 KMVAIDCEMVGTGPKGRVSSLARCSIVNYNGDVLYDEYVLPPCYIVNYRTRWSGIRKCHM 252
Query: 193 RDAIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIMTRDT 252
+A P K + +I L +G ++++GH + +D LQ +P +TRDT
Sbjct: 253 VNATPFKTARSQILKIL-SG-------------KVVIGHAIHNDYKALQYFHPKSLTRDT 298
Query: 253 AKYPPLMKTS----KLSNSLKYLTQAYLGYDIQIGI--QDPYDDCVATMRLY--MRMKSQ 304
++ P L + + ++ SLK+LT+ L DIQ+G +D ATM LY + ++ +
Sbjct: 299 SRIPLLNRKADCPENVTLSLKHLTKKLLSRDIQVGNTGHSSVEDAQATMELYKLVEVEWE 358
Query: 305 AHKREDYP 312
H ++ P
Sbjct: 359 QHLAQNPP 366
>RGD|1359413 [details] [associations]
symbol:Isg20l2 "interferon stimulated exonuclease gene 20-like
2" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 RGD:1359413 GO:GO:0005730 GO:GO:0003676
GO:GO:0042254 GO:GO:0004527 GO:GO:0090305 eggNOG:COG0847
HOGENOM:HOG000182422 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 CTD:81875 HOVERGEN:HBG107986
OrthoDB:EOG4H4641 EMBL:BC079314 IPI:IPI00373225
RefSeq:NP_001007742.1 UniGene:Rn.56954 ProteinModelPortal:Q6AXU3
PRIDE:Q6AXU3 Ensembl:ENSRNOT00000015471 GeneID:361977
KEGG:rno:361977 UCSC:RGD:1359413 InParanoid:Q6AXU3 OMA:ESGARTF
NextBio:678262 Genevestigator:Q6AXU3 Uniprot:Q6AXU3
Length = 369
Score = 191 (72.3 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 53/188 (28%), Positives = 95/188 (50%)
Query: 133 QVVAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIRPEHL 192
++VAI C+MV R I++ ++++ Y++PP + YR +GIR H+
Sbjct: 194 KMVAIDCEMVGTGPKGRVSSLARCSIVNYNGDVLYDEYIRPPCYIVDYRTRWSGIRKCHM 253
Query: 193 RDAIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIMTRDT 252
+A P K + +I L +G +++VGH + +D LQ +P +TRDT
Sbjct: 254 VNATPFKTARSQILKIL-SG-------------KVVVGHAIHNDYKALQYFHPKSLTRDT 299
Query: 253 AKYPPLMKTS----KLSNSLKYLTQAYLGYDIQIGIQ--DPYDDCVATMRLY--MRMKSQ 304
++ P L + + ++ SLK+LT+ L DIQ G+ +D AT+ LY + ++ +
Sbjct: 300 SQIPLLNRKADCPENVTLSLKHLTKKLLSRDIQTGLSGHSSVEDAQATLELYKLVEVEWE 359
Query: 305 AHKREDYP 312
H ++ P
Sbjct: 360 QHLAQNPP 367
>UNIPROTKB|F1RHI9 [details] [associations]
symbol:ISG20L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0005634 GO:GO:0003676
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 OMA:GTGPKGH EMBL:CU582900
RefSeq:XP_001924782.1 UniGene:Ssc.54513 Ensembl:ENSSSCT00000007088
GeneID:100157573 KEGG:ssc:100157573 Uniprot:F1RHI9
Length = 343
Score = 185 (70.2 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 52/172 (30%), Positives = 82/172 (47%)
Query: 133 QVVAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIRPEHL 192
++VAI C+MV R I++ ++++ Y+ PP + YR +GIR +H+
Sbjct: 168 KMVAIDCEMVGTGPKGHVSSLARCSIVNYNGDVLYDEYILPPCHIVDYRTRWSGIRKQHM 227
Query: 193 RDAIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIMTRDT 252
+A P K + +I L +I+VGH + +D LQ +P +TRDT
Sbjct: 228 VNATPFKIARSQILKILTG--------------KIVVGHAIHNDFKALQYFHPKSLTRDT 273
Query: 253 AKYPPLMKTS----KLSNSLKYLTQAYLGYDIQIGIQ--DPYDDCVATMRLY 298
+ P L + + + SLK LT+ L DIQ+G +D ATM LY
Sbjct: 274 SHIPLLNRKADCPENATMSLKRLTKKLLDRDIQVGKSGHSSVEDAQATMELY 325
>UNIPROTKB|Q2YDK1 [details] [associations]
symbol:ISG20L2 "Interferon-stimulated 20 kDa
exonuclease-like 2" species:9913 "Bos taurus" [GO:0005730
"nucleolus" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005730
GO:GO:0003676 GO:GO:0042254 GO:GO:0004527 GO:GO:0090305
eggNOG:COG0847 HOGENOM:HOG000182422 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00520000055542 EMBL:BC110186
IPI:IPI00711321 RefSeq:NP_001039682.1 UniGene:Bt.80589
ProteinModelPortal:Q2YDK1 SMR:Q2YDK1 PRIDE:Q2YDK1
Ensembl:ENSBTAT00000001989 GeneID:515980 KEGG:bta:515980 CTD:81875
HOVERGEN:HBG107986 InParanoid:Q2YDK1 OMA:GTGPKGH OrthoDB:EOG4H4641
NextBio:20872080 Uniprot:Q2YDK1
Length = 349
Score = 185 (70.2 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 54/188 (28%), Positives = 89/188 (47%)
Query: 133 QVVAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIRPEHL 192
++VAI C+MV R I++ ++++ Y+ PP + YR +GIR +H+
Sbjct: 174 KMVAIDCEMVGTGPKGHVSSLARCSIVNYDGDVLYDEYILPPCHIVDYRTRWSGIRKQHM 233
Query: 193 RDAIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIMTRDT 252
+A P K + +I L +I+VGH + +D LQ +P +TRDT
Sbjct: 234 VNATPFKIARNQILKILAG--------------KIVVGHAIHNDFKALQYIHPKSLTRDT 279
Query: 253 AKYPPLMKTS----KLSNSLKYLTQAYLGYDIQIGIQ--DPYDDCVATMRLY--MRMKSQ 304
+ P L + + + SLK LT+ L DIQ G +D ATM LY + ++ +
Sbjct: 280 SHIPLLNRKADCPENATMSLKSLTKKLLNRDIQAGKSGHSSVEDAQATMELYKLVEVEWE 339
Query: 305 AHKREDYP 312
H ++ P
Sbjct: 340 QHLAQNPP 347
>UNIPROTKB|Q5REE2 [details] [associations]
symbol:AEN "Apoptosis-enhancing nuclease" species:9601
"Pongo abelii" [GO:0004527 "exonuclease activity" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0010212 "response to ionizing radiation"
evidence=ISS] [GO:0042771 "intrinsic apoptotic signaling pathway in
response to DNA damage by p53 class mediator" evidence=ISS]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
GO:GO:0005654 GO:GO:0005730 GO:GO:0042771 GO:GO:0003676
GO:GO:0010212 GO:GO:0004527 CTD:64782 HOGENOM:HOG000182422
HOVERGEN:HBG100435 InterPro:IPR013520 SUPFAM:SSF53098 EMBL:CR857587
RefSeq:NP_001124869.1 UniGene:Pab.10699 ProteinModelPortal:Q5REE2
SMR:Q5REE2 GeneID:100171731 KEGG:pon:100171731 Uniprot:Q5REE2
Length = 325
Score = 183 (69.5 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 55/210 (26%), Positives = 95/210 (45%)
Query: 135 VAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIRPEHLRD 194
VAI C+MV R I+ + ++++ Y++P +P+ YR +GI +H+
Sbjct: 111 VAIDCEMVGTGPRGRVSELARCSIVSYHGDVLYDKYIRPEMPIVDYRTRWSGITRQHMCK 170
Query: 195 AIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIMTRDTAK 254
AIP + Q++I L + +++VGH L +D L+ +P TRDT
Sbjct: 171 AIPFQVAQKEILKLL--------------KGKVVVGHALHNDFQALKYVHPRSQTRDTTY 216
Query: 255 YPPLMKTSKLSN----SLKYLTQAYLGYDIQIGIQ--DPYDDCVATMRLYMRMKSQAHKR 308
P + L SLK L L IQ+G +D M LY ++ Q ++
Sbjct: 217 VPNFLSEPSLHIRARVSLKDLALQLLHKKIQVGQHGHSSVEDATTAMELYRLVEVQWEQQ 276
Query: 309 EDYPLASDPQNRNNYASWRQTELERMSPEE 338
E L + P++R +S T++E+ ++
Sbjct: 277 EARSLWTCPEDREPDSS---TDMEQYMEDQ 303
>RGD|1305051 [details] [associations]
symbol:Aen "apoptosis enhancing nuclease" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA;ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
evidence=IEA;ISO;ISS] [GO:0005730 "nucleolus" evidence=IEA;ISO;ISS]
[GO:0010212 "response to ionizing radiation" evidence=IEA;ISO;ISS]
[GO:0042771 "intrinsic apoptotic signaling pathway in response to
DNA damage by p53 class mediator" evidence=IEA;ISO;ISS]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
RGD:1305051 GO:GO:0005654 GO:GO:0005730 GO:GO:0042771 EMBL:CH473980
GO:GO:0003676 GO:GO:0010212 GO:GO:0004527 CTD:64782 eggNOG:COG0847
HOGENOM:HOG000182422 HOVERGEN:HBG100435 OrthoDB:EOG4P8FJM
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00520000055542
EMBL:BC166435 IPI:IPI00365766 RefSeq:NP_001101957.1
UniGene:Rn.46887 ProteinModelPortal:B2GUW6 SMR:B2GUW6 PRIDE:B2GUW6
Ensembl:ENSRNOT00000064438 GeneID:361594 KEGG:rno:361594
UCSC:RGD:1305051 NextBio:676841 Genevestigator:B2GUW6
Uniprot:B2GUW6
Length = 332
Score = 181 (68.8 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 56/220 (25%), Positives = 99/220 (45%)
Query: 135 VAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIRPEHLRD 194
VAI C+MV R ++ ++++ Y++P +P+ YR +GI +H+
Sbjct: 106 VAIDCEMVGTGPQGRVSELARCSVVSYSGDVLYDKYIRPEMPIVDYRTRWSGITRQHMHK 165
Query: 195 AIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIMTRDTAK 254
AIP + Q++I L + +++VGH L +D L+ +P RDT
Sbjct: 166 AIPFQVAQKEILKLL--------------KGKVVVGHALHNDFQALKYVHPGSQIRDTTY 211
Query: 255 YPPLM-KTSKLSN---SLKYLTQAYLGYDIQIGIQ--DPYDDCVATMRLYMRMKSQAHKR 308
P L+ + S L+ SLK L L IQ+G +D + M LY ++ Q ++
Sbjct: 212 VPNLLSQPSSLTRARVSLKDLALNLLHKKIQVGHHGHSSVEDAMTAMELYQLVEVQWEQQ 271
Query: 309 EDYPLASDPQNRNNYASW--RQTELERMSPEEMLAISRSD 346
+ P++R +S Q ++ PE++ +R D
Sbjct: 272 VASTAKAHPEDRGPDSSTDVEQYMDDQYWPEDLAQSTRGD 311
>UNIPROTKB|F8WG03 [details] [associations]
symbol:Aen "Apoptosis-enhancing nuclease" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 RGD:1305051 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 IPI:IPI00949441
Ensembl:ENSRNOT00000024962 OMA:GMVPREV Uniprot:F8WG03
Length = 355
Score = 181 (68.8 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 56/220 (25%), Positives = 99/220 (45%)
Query: 135 VAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIRPEHLRD 194
VAI C+MV R ++ ++++ Y++P +P+ YR +GI +H+
Sbjct: 129 VAIDCEMVGTGPQGRVSELARCSVVSYSGDVLYDKYIRPEMPIVDYRTRWSGITRQHMHK 188
Query: 195 AIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIMTRDTAK 254
AIP + Q++I L + +++VGH L +D L+ +P RDT
Sbjct: 189 AIPFQVAQKEILKLL--------------KGKVVVGHALHNDFQALKYVHPGSQIRDTTY 234
Query: 255 YPPLM-KTSKLSN---SLKYLTQAYLGYDIQIGIQ--DPYDDCVATMRLYMRMKSQAHKR 308
P L+ + S L+ SLK L L IQ+G +D + M LY ++ Q ++
Sbjct: 235 VPNLLSQPSSLTRARVSLKDLALNLLHKKIQVGHHGHSSVEDAMTAMELYQLVEVQWEQQ 294
Query: 309 EDYPLASDPQNRNNYASW--RQTELERMSPEEMLAISRSD 346
+ P++R +S Q ++ PE++ +R D
Sbjct: 295 VASTAKAHPEDRGPDSSTDVEQYMDDQYWPEDLAQSTRGD 334
>MGI|MGI:1915298 [details] [associations]
symbol:Aen "apoptosis enhancing nuclease" species:10090 "Mus
musculus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=ISO] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0010212 "response to
ionizing radiation" evidence=ISO] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0042771 "intrinsic apoptotic signaling pathway in
response to DNA damage by p53 class mediator" evidence=ISO]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
MGI:MGI:1915298 GO:GO:0005654 GO:GO:0005730 GO:GO:0042771
GO:GO:0003676 GO:GO:0010212 GO:GO:0004527 CTD:64782 eggNOG:COG0847
HOGENOM:HOG000182422 HOVERGEN:HBG100435 OMA:HKRKSRQ
OrthoDB:EOG4P8FJM InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AK090056
EMBL:AK012555 EMBL:AK031972 EMBL:AK165708 EMBL:AK166806
EMBL:AK167042 EMBL:AK167658 EMBL:BC022614 IPI:IPI00857428
IPI:IPI00990849 RefSeq:NP_001156411.1 RefSeq:NP_080807.3
UniGene:Mm.34109 ProteinModelPortal:Q9CZI9 SMR:Q9CZI9
PhosphoSite:Q9CZI9 PRIDE:Q9CZI9 Ensembl:ENSMUST00000107421
Ensembl:ENSMUST00000107423 Ensembl:ENSMUST00000107425 GeneID:68048
KEGG:mmu:68048 UCSC:uc009hxp.1 UCSC:uc009hxq.1
GeneTree:ENSGT00520000055542 InParanoid:Q9CZI9 NextBio:326308
Bgee:Q9CZI9 Genevestigator:Q9CZI9 Uniprot:Q9CZI9
Length = 336
Score = 176 (67.0 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 50/176 (28%), Positives = 81/176 (46%)
Query: 135 VAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIRPEHLRD 194
VAI C+MV R ++ ++++ Y++P +P+ YR +GI +H+
Sbjct: 110 VAIDCEMVGTGPQGRVSELARCSVVSYSGDVLYDKYIRPEMPIVDYRTRWSGITRQHMHK 169
Query: 195 AIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIMTRDTAK 254
AIP + Q++I L + +++VGH L +D L+ +P TRDT
Sbjct: 170 AIPFQVAQKEILKLL--------------KGKVVVGHALHNDFQALKYVHPRSQTRDTTY 215
Query: 255 YPPLM-KTSKLSN---SLKYLTQAYLGYDIQIGIQ--DPYDDCVATMRLYMRMKSQ 304
P L+ + S L SLK L L IQ+G Q +D + M LY ++ Q
Sbjct: 216 VPNLLSQPSSLIRTRVSLKDLALNLLHKKIQVGHQGHSSVEDAMTAMELYQLVEVQ 271
>TAIR|locus:2083163 [details] [associations]
symbol:SDN1 "small RNA degrading nuclease 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008408 "3'-5' exonuclease activity"
evidence=IDA] [GO:0010587 "miRNA catabolic process" evidence=IDA]
InterPro:IPR006055 InterPro:IPR012337 InterPro:IPR012677
SMART:SM00479 Pfam:PF00929 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
GO:GO:0008408 EMBL:AL132978 KO:K14570 GO:GO:0010587 EMBL:BT030315
IPI:IPI00540352 PIR:T45863 RefSeq:NP_190579.2 UniGene:At.35533
ProteinModelPortal:A3KPE8 SMR:A3KPE8 PaxDb:A3KPE8 PRIDE:A3KPE8
EnsemblPlants:AT3G50100.1 GeneID:824172 KEGG:ath:AT3G50100
TAIR:At3g50100 HOGENOM:HOG000083886 InParanoid:A3KPE8 OMA:DYRTDIT
PhylomeDB:A3KPE8 ProtClustDB:CLSN2925541 Genevestigator:A3KPE8
Uniprot:A3KPE8
Length = 409
Score = 177 (67.4 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 62/205 (30%), Positives = 104/205 (50%)
Query: 113 LANLGVRDSLTIDNTHTRDPQVVAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVK 172
++++G++ +++T+ +VA+ C+MV RV ++D +I +VK
Sbjct: 124 VSDVGMKMKKVMESTN-----MVAVDCEMVLCEDGTEGLV--RVGVVDRDLKVILDEFVK 176
Query: 173 PPIPVTSYRYETTGIRPEHLRDA-IPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGH 231
P PV YR + TGI E + +A + + +Q +Q FL G ILVGH
Sbjct: 177 PNKPVVDYRTDITGITAEDIENASLSVVDIQETLQPFLSTGT-------------ILVGH 223
Query: 232 GLDHDLDRLQVEYPAIMTRDTA---KYPPLMKTSKLSN-SLKYLTQAYLGYDIQ-IGIQD 286
L+ DL+ L++++P ++ DTA KYP T KL SL L ++ LGY+++ G+
Sbjct: 224 SLNRDLEVLKIDHPKVI--DTALVFKYP---NTRKLRRPSLNNLCKSILGYEVRKTGV-- 276
Query: 287 PYDDCVATMRLYMRMK-SQAHKRED 310
P+D CV M++ + KR D
Sbjct: 277 PHD-CVHDASAAMKLALAVVEKRVD 300
>UNIPROTKB|E1C018 [details] [associations]
symbol:AEN "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0010212 "response to ionizing radiation" evidence=IEA]
[GO:0042771 "intrinsic apoptotic signaling pathway in response to
DNA damage by p53 class mediator" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005654
GO:GO:0005730 GO:GO:0042771 GO:GO:0003676 GO:GO:0010212
GO:GO:0004527 OMA:HKRKSRQ InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:AADN02041516 IPI:IPI00577225
ProteinModelPortal:E1C018 Ensembl:ENSGALT00000010894
NextBio:20819091 Uniprot:E1C018
Length = 301
Score = 173 (66.0 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 59/204 (28%), Positives = 93/204 (45%)
Query: 103 SSATTGLNARLANLGVRDSLT-IDNTHTRDPQVVAIACKMVXXXXXXXXXXCGRVCIIDE 161
S++ + R V +++T + R + VAI C+MV R C I
Sbjct: 66 SASPNDIVGRCCGTSVGNAVTGVQLCPPRPNKYVAIDCEMVGTGPRGRQSELAR-CSIVS 124
Query: 162 YE-NIIFHAYVKPPIPVTSYRYETTGIRPEHLRDAIPLKQVQRKIQDFLCNGEPMWKIRP 220
Y+ ++I+ YV P +PV +R +GI H+ AIP + Q +I L
Sbjct: 125 YDGDVIYDKYVLPLLPVVDFRTRWSGITKRHMESAIPFRAAQEEILKIL----------- 173
Query: 221 RGSRARILVGHGLDHDLDRLQVEYPAIMTRDTAKYPPLMKTSKL---SN-SLKYLTQAYL 276
+ RI+VGH + +D L+ +P TRDT++ P L + + L +N SLK L + L
Sbjct: 174 ---KDRIVVGHAIHNDFQALKYFHPKERTRDTSRIPLLNQRAGLPPGANASLKSLARHLL 230
Query: 277 GYDIQIGIQ--DPYDDCVATMRLY 298
IQ+G + +D M LY
Sbjct: 231 QKKIQVGCKGHSSVEDARTAMELY 254
>UNIPROTKB|E2R2F5 [details] [associations]
symbol:ISG20 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016605 "PML body" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008310 "single-stranded DNA
specific 3'-5' exodeoxyribonuclease activity" evidence=IEA]
[GO:0006401 "RNA catabolic process" evidence=IEA] [GO:0000738 "DNA
catabolic process, exonucleolytic" evidence=IEA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0016605 GO:GO:0003676
GO:GO:0009615 GO:GO:0006401 InterPro:IPR013520 SUPFAM:SSF53098
GO:GO:0000175 GO:GO:0000738 GO:GO:0008310
Ensembl:ENSCAFT00000018291 Uniprot:E2R2F5
Length = 183
Score = 147 (56.8 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 50/187 (26%), Positives = 80/187 (42%)
Query: 134 VVAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIRPEHLR 193
VVAI C+MV R ++D + +++ +++P +T YR + +GI P H+
Sbjct: 7 VVAIDCEMVGVGPSRKSGLA-RCSLVDLHGTVLYDKFIRPEGEITDYRTQVSGITPRHME 65
Query: 194 DAIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIMTRDTA 253
A P + +I L +++VGH L HD L+ DT+
Sbjct: 66 QATPFAVARLEILQLL--------------EGKLVVGHDLKHDFQALKENMSNYAIYDTS 111
Query: 254 KYPPLMKTSKLSN----SLKYLTQAYLGYDIQ---IGIQDPYDDCVATMRLYMRMKSQAH 306
L + + L N SL+ L++ LG IQ G +D A M LY R+ +
Sbjct: 112 TDRLLWREANLQNCRRVSLRVLSERLLGRRIQNSRFG-HSSVEDAKAAMELY-RLSRRIR 169
Query: 307 KREDYPL 313
R+ PL
Sbjct: 170 ARKAAPL 176
>ASPGD|ASPL0000067196 [details] [associations]
symbol:AN7566 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
GO:GO:0003676 GO:GO:0005622 EMBL:AACD01000129 EMBL:BN001304
GO:GO:0004527 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
KO:K14570 OrthoDB:EOG4MKRQF HOGENOM:HOG000165759 RefSeq:XP_680835.1
ProteinModelPortal:Q5AVW4 EnsemblFungi:CADANIAT00000673
GeneID:2869567 KEGG:ani:AN7566.2 OMA:WARMREL Uniprot:Q5AVW4
Length = 723
Score = 168 (64.2 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 63/195 (32%), Positives = 89/195 (45%)
Query: 129 TRDPQVVAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIR 188
T V+A+ C+M R+ ++ ++ VKP +PV Y +GI
Sbjct: 340 TAGRDVLALDCEMCITEGGSSELT--RISLVRWDGEVVLDELVKPRLPVIDYLTRFSGIT 397
Query: 189 PEHLRDAIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIM 248
E L D P+ R IQ L N I PR ILVGH L+ DL+ L++ +P I+
Sbjct: 398 KEML-D--PVTTTLRDIQQKLLN-----IITPRS----ILVGHSLNSDLNALKLTHPFIV 445
Query: 249 TRDTAKYPPLMKTSKLSNSLKYLTQAYLGYDIQIGI--QDPYDDCVATMRLYMRMKSQAH 306
DT P + L SLK+LTQ YLG +IQ G D +D A + L +K +
Sbjct: 446 --DTVFLYPHPRGPPLRASLKWLTQKYLGKEIQKGTTGHDSIEDARAVLEL---VKQKCE 500
Query: 307 KREDYPLASDPQNRN 321
K E + SD N +
Sbjct: 501 KGEQWG-TSDASNES 514
>RGD|1306407 [details] [associations]
symbol:Isg20 "interferon stimulated exonuclease gene 20"
species:10116 "Rattus norvegicus" [GO:0000175
"3'-5'-exoribonuclease activity" evidence=ISO] [GO:0000738 "DNA
catabolic process, exonucleolytic" evidence=ISO] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006401 "RNA catabolic process" evidence=ISO] [GO:0008310
"single-stranded DNA specific 3'-5' exodeoxyribonuclease activity"
evidence=ISO] [GO:0009615 "response to virus" evidence=ISO]
[GO:0016605 "PML body" evidence=ISO] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 RGD:1306407
GO:GO:0016605 GO:GO:0003676 GO:GO:0009615 GO:GO:0006401
eggNOG:COG0847 HOGENOM:HOG000182422 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00520000055542 GO:GO:0000175
GO:GO:0000738 GO:GO:0008310 CTD:3669 HOVERGEN:HBG052149 KO:K12579
OrthoDB:EOG4M91SN EMBL:BC086557 IPI:IPI00364365
RefSeq:NP_001008510.1 UniGene:Rn.16103 SMR:Q5RJP5
Ensembl:ENSRNOT00000024826 GeneID:293052 KEGG:rno:293052
NextBio:635263 Genevestigator:Q5RJP5 Uniprot:Q5RJP5
Length = 181
Score = 140 (54.3 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 49/182 (26%), Positives = 83/182 (45%)
Query: 132 PQVVAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIRPEH 191
P+VVA+ C+MV R I++ + +++ Y++P +T YR + +GI P+H
Sbjct: 5 PEVVAMDCEMVGLGPQRVSGLA-RCSIVNVHSAVLYDKYIQPEGEITDYRTQVSGITPQH 63
Query: 192 LRDAIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIMTRD 251
+ A P + + +I L + +++VGH L HD L+ + D
Sbjct: 64 MARATPFAEARLEILQLL--------------KGKLVVGHDLKHDFSALKEDMRKYTIYD 109
Query: 252 TAKYPPLMKTSKL---SN-SLKYLTQAYLGYDIQIGIQD--PYDDCVATMRLY---MRMK 302
T+ L +KL S SL+ L + L IQ + +D ATM LY R++
Sbjct: 110 TSTDMLLWHEAKLHCYSRVSLRLLCKRLLHKSIQNNWRGHCSVEDARATMELYKISQRLR 169
Query: 303 SQ 304
+Q
Sbjct: 170 AQ 171
>UNIPROTKB|F6X5D6 [details] [associations]
symbol:ISG20 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 CTD:3669 KO:K12579 OMA:ARCSLVD
Ensembl:ENSCAFT00000018291 EMBL:AAEX03002317 RefSeq:XP_545847.2
GeneID:488729 KEGG:cfa:488729 Uniprot:F6X5D6
Length = 171
Score = 139 (54.0 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 48/182 (26%), Positives = 77/182 (42%)
Query: 134 VVAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIRPEHLR 193
VVAI C+MV R ++D + +++ +++P +T YR + +GI P H+
Sbjct: 7 VVAIDCEMVGVGPSRKSGLA-RCSLVDLHGTVLYDKFIRPEGEITDYRTQVSGITPRHME 65
Query: 194 DAIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIMTRDTA 253
A P + +I L +++VGH L HD L+ DT+
Sbjct: 66 QATPFAVARLEILQLL--------------EGKLVVGHDLKHDFQALKENMSNYAIYDTS 111
Query: 254 KYPPLMKTSKLSN----SLKYLTQAYLGYDIQ---IGIQDPYDDCVATMRLYMRMKSQAH 306
L + + L N SL+ L++ LG IQ G +D A M LY R+ +
Sbjct: 112 TDRLLWREANLQNCRRVSLRVLSERLLGRRIQNSRFG-HSSVEDAKAAMELY-RLSRRIR 169
Query: 307 KR 308
R
Sbjct: 170 AR 171
>SGD|S000003508 [details] [associations]
symbol:RNH70 "3'-5' exoribonuclease" species:4932
"Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0034415 "tRNA 3'-trailer cleavage, exonucleolytic"
evidence=IGI;IMP] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISS] [GO:0000175 "3'-5'-exoribonuclease activity"
evidence=IMP] [GO:0003723 "RNA binding" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0034476 "U5 snRNA 3'-end processing"
evidence=IGI] [GO:0000467 "exonucleolytic trimming to generate
mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IGI] [GO:0002107
"generation of mature 3'-end of 5S rRNA generated by RNA polymerase
III" evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 SGD:S000003508 Pfam:PF00929
GO:GO:0005634 EMBL:BK006941 GO:GO:0003723 eggNOG:COG0847
InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0000175 EMBL:Z73062
GO:GO:0000467 EMBL:X84098 KO:K14570 GO:GO:0034476
GeneTree:ENSGT00630000089807 EMBL:Z73061 PIR:S64609
RefSeq:NP_011792.1 ProteinModelPortal:P53331 SMR:P53331
DIP:DIP-5564N IntAct:P53331 MINT:MINT-551078 STRING:P53331
PaxDb:P53331 PeptideAtlas:P53331 EnsemblFungi:YGR276C GeneID:853193
KEGG:sce:YGR276C CYGD:YGR276c HOGENOM:HOG000065977
OrthoDB:EOG4MKRQF NextBio:973350 Genevestigator:P53331
GermOnline:YGR276C GO:GO:0002107 GO:GO:0034415 Uniprot:P53331
Length = 553
Score = 158 (60.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 49/175 (28%), Positives = 83/175 (47%)
Query: 123 TIDNTHTRDPQVVAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRY 182
T+D TH + A+ C+M R+ +++ +I+ VKP +P+ Y
Sbjct: 215 TVDFTHGGS-HIFALDCEMCLSEQGLVLT---RISLVNFDNEVIYEELVKPDVPIVDYLT 270
Query: 183 ETTGIRPEHLRDAIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQV 242
+GI E L + K+ R++Q + + KI SR+ IL+GH L +DL +++
Sbjct: 271 RYSGITEEKL--TVGAKKTLREVQ------KDLLKII---SRSDILIGHSLQNDLKVMKL 319
Query: 243 EYPAIMTRDTAKYPPLMKTSKLSNSLKYLTQAYLGYDIQIGIQDPYDDCVATMRL 297
++P ++ DTA SLKYL++ +L IQ G D +D A + L
Sbjct: 320 KHPLVV--DTAIIYHHKAGDPFKPSLKYLSETFLNKSIQNGEHDSVEDARACLEL 372
>UNIPROTKB|Q96AZ6 [details] [associations]
symbol:ISG20 "Interferon-stimulated gene 20 kDa protein"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0008859 "exoribonuclease II activity"
evidence=IEA] [GO:0016605 "PML body" evidence=IDA] [GO:0006401 "RNA
catabolic process" evidence=IDA] [GO:0000738 "DNA catabolic
process, exonucleolytic" evidence=IDA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IDA] [GO:0008310
"single-stranded DNA specific 3'-5' exodeoxyribonuclease activity"
evidence=IDA] [GO:0009615 "response to virus" evidence=IDA]
[GO:0008283 "cell proliferation" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0019221 "cytokine-mediated
signaling pathway" evidence=TAS] [GO:0060337 "type I
interferon-mediated signaling pathway" evidence=TAS]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
Reactome:REACT_6900 GO:GO:0060337 GO:GO:0046872 GO:GO:0016605
GO:GO:0008283 GO:GO:0051607 GO:GO:0003723 GO:GO:0009615
GO:GO:0006401 eggNOG:COG0847 HOGENOM:HOG000182422
InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0006364 GO:GO:0000175
GO:GO:0000738 GO:GO:0008310 GO:GO:0008859 EMBL:X89773 EMBL:U88964
EMBL:BT006952 EMBL:CR456942 EMBL:BC007922 EMBL:BC016341
IPI:IPI00514614 IPI:IPI00647246 RefSeq:NP_002192.2
UniGene:Hs.459265 PDB:1WLJ PDBsum:1WLJ ProteinModelPortal:Q96AZ6
SMR:Q96AZ6 STRING:Q96AZ6 PhosphoSite:Q96AZ6 DMDM:57012967
PaxDb:Q96AZ6 PRIDE:Q96AZ6 DNASU:3669 Ensembl:ENST00000306072
Ensembl:ENST00000560741 GeneID:3669 KEGG:hsa:3669 UCSC:uc002bmv.1
CTD:3669 GeneCards:GC15P089181 HGNC:HGNC:6130 MIM:604533
neXtProt:NX_Q96AZ6 PharmGKB:PA29930 HOVERGEN:HBG052149 KO:K12579
OMA:ARCSLVD OrthoDB:EOG4M91SN PhylomeDB:Q96AZ6 ChiTaRS:ISG20
EvolutionaryTrace:Q96AZ6 GenomeRNAi:3669 NextBio:14359 Bgee:Q96AZ6
CleanEx:HS_ISG20 Genevestigator:Q96AZ6 GermOnline:ENSG00000172183
Uniprot:Q96AZ6
Length = 181
Score = 135 (52.6 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 44/186 (23%), Positives = 82/186 (44%)
Query: 133 QVVAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIRPEHL 192
+VVA+ C+MV R +++ + +++ +++P +T YR +G+ P+H+
Sbjct: 6 EVVAMDCEMVGLGPHRESGLA-RCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHM 64
Query: 193 RDAIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIMTRDT 252
A P + +I L + +++VGH L HD L+ + DT
Sbjct: 65 VGATPFAVARLEILQLL--------------KGKLVVGHDLKHDFQALKEDMSGYTIYDT 110
Query: 253 AKYPPLMKTSKLSN----SLKYLTQAYLGYDIQIGI--QDPYDDCVATMRLYMRMKSQAH 306
+ L + +KL + SL+ L++ L IQ + +D ATM LY ++ +
Sbjct: 111 STDRLLWREAKLDHCRRVSLRVLSERLLHKSIQNSLLGHSSVEDARATMELY-QISQRIR 169
Query: 307 KREDYP 312
R P
Sbjct: 170 ARRGLP 175
>WB|WBGene00015462 [details] [associations]
symbol:C05C8.5 species:6239 "Caenorhabditis elegans"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
KO:K14570 GeneTree:ENSGT00630000089807 EMBL:FO080353 PIR:T31744
RefSeq:NP_504838.1 ProteinModelPortal:O16312 SMR:O16312
PaxDb:O16312 EnsemblMetazoa:C05C8.5.1 EnsemblMetazoa:C05C8.5.2
GeneID:179116 KEGG:cel:CELE_C05C8.5 UCSC:C05C8.5 CTD:179116
WormBase:C05C8.5 HOGENOM:HOG000021553 InParanoid:O16312 OMA:DAWAAMR
NextBio:903992 Uniprot:O16312
Length = 594
Score = 155 (59.6 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 49/146 (33%), Positives = 69/146 (47%)
Query: 155 RVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIRPEHLRDAIP-LKQVQRKIQDFLCNGE 213
R+ I+DE+EN I VKP +T Y +GI P+ + L VQ+ IQ L
Sbjct: 240 RISIVDEFENTILDTLVKPEGRITDYVTRWSGITPDMMEGVTTTLGDVQKAIQSLL---- 295
Query: 214 PMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIM-TRDTAKYPPLMKTSKLSNSLKYLT 272
P + ILVGH L+HDL +++ +P + Y ++ NSLK LT
Sbjct: 296 ------PPDA---ILVGHSLEHDLQAMKMTHPFCLDVGHVLNYTN--SNTEFRNSLKNLT 344
Query: 273 QAYLGYDIQIGIQD-PYDDCVATMRL 297
+ +LG IQ Y+D A MRL
Sbjct: 345 ELFLGAQIQSEFGHCSYEDAWAAMRL 370
>UNIPROTKB|G4MYV4 [details] [associations]
symbol:MGG_15523 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:CM001232
RefSeq:XP_003713422.1 ProteinModelPortal:G4MYV4
EnsemblFungi:MGG_15523T0 GeneID:12987077 KEGG:mgr:MGG_15523
Uniprot:G4MYV4
Length = 720
Score = 154 (59.3 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 51/194 (26%), Positives = 87/194 (44%)
Query: 129 TRDPQVVAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIR 188
T ++ AI C+M RV I+ ++ VKP +P+ Y + +GI
Sbjct: 308 TAGREIFAIDCEMCRTGPTNHDLSLTRVTILSWDGEVVMDELVKPSLPILDYLTQFSGIT 367
Query: 189 PEHLRDAIP-LKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAI 247
E L L +Q+++ + L PR ILVGH LD D+ LQ+ +P +
Sbjct: 368 KEMLEPVTTTLPDIQKRLLELLT---------PRS----ILVGHSLDSDMKALQMAHPFV 414
Query: 248 MTRDTAKYPPLMKTSKLSNSLKYLTQAYLGYDIQ-----IGIQDPYDDCVATMRLYMRMK 302
+ DT+ P + +SLK+L YLG +Q + D Y+D + + L +K
Sbjct: 415 V--DTSILFPNPSSPNGKHSLKHLASKYLGRQVQKDEGSLKGHDSYEDALTALDL---VK 469
Query: 303 SQAHKREDYPLASD 316
+ K +++ ++ D
Sbjct: 470 KKCEKGKEWGVSGD 483
>UNIPROTKB|Q66UW5 [details] [associations]
symbol:Isg20 "Interferon-stimulated gene 20 kDa protein"
species:9823 "Sus scrofa" [GO:0005634 "nucleus" evidence=IEA]
[GO:0008859 "exoribonuclease II activity" evidence=IEA] [GO:0051607
"defense response to virus" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0045087 "innate immune response"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005634
GO:GO:0046872 GO:GO:0045087 GO:GO:0051607 GO:GO:0003723
GO:GO:0090305 InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0006364
GO:GO:0008859 CTD:3669 HOVERGEN:HBG052149 KO:K12579 EMBL:AY702647
RefSeq:NP_001005351.2 UniGene:Ssc.42771 ProteinModelPortal:Q66UW5
SMR:Q66UW5 GeneID:448855 KEGG:ssc:448855 Uniprot:Q66UW5
Length = 181
Score = 131 (51.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 44/186 (23%), Positives = 81/186 (43%)
Query: 133 QVVAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIRPEHL 192
+VVA+ C+MV R +++ + +++ +++P +T YR +G+ P+H+
Sbjct: 6 EVVAMDCEMVGMGPRRESGLA-RCSLVNVHGAVLYDKFIQPEGEITDYRTRVSGVTPQHM 64
Query: 193 RDAIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIMTRDT 252
A P + +I L + +++VGH L HD L+ + DT
Sbjct: 65 VGATPFAVARLEILQLL--------------KGKLVVGHDLKHDFQALKEDMNRYTIYDT 110
Query: 253 AKYPPLMKTSKLSN----SLKYLTQAYLGYDIQIGI--QDPYDDCVATMRLYMRMKSQAH 306
+ L + +KL + SL+ L + L IQ + +D ATM LY ++ +
Sbjct: 111 STDMLLWREAKLDHCRRVSLRVLCERLLHKSIQNSLLGHSSVEDAKATMELY-QISQRIR 169
Query: 307 KREDYP 312
R P
Sbjct: 170 ARRGLP 175
>UNIPROTKB|I3LB04 [details] [associations]
symbol:ISG20 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016605 "PML body" evidence=IEA] [GO:0009615 "response
to virus" evidence=IEA] [GO:0008310 "single-stranded DNA specific
3'-5' exodeoxyribonuclease activity" evidence=IEA] [GO:0006401 "RNA
catabolic process" evidence=IEA] [GO:0000738 "DNA catabolic
process, exonucleolytic" evidence=IEA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0016605 GO:GO:0003676
GO:GO:0009615 GO:GO:0006401 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 GO:GO:0000175 GO:GO:0000738
GO:GO:0008310 OMA:ARCSLVD EMBL:FP017226 Ensembl:ENSSSCT00000024643
Uniprot:I3LB04
Length = 174
Score = 126 (49.4 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 45/175 (25%), Positives = 75/175 (42%)
Query: 130 RDPQVVAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIRP 189
R VVA+ C+MV R ++D + +++ +++P +T YR +GI
Sbjct: 3 RGMDVVAMDCEMVGLGPFRESGLA-RCSLVDFHGTVLYDKFIRPEGEITDYRTPVSGITA 61
Query: 190 EHLRDAIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIMT 249
++ A P + +I L + +++VGH L HD L+
Sbjct: 62 RNMEGATPFAVARLEILQLL--------------KGKLVVGHDLKHDFKALKENMSNYTI 107
Query: 250 RDTAKYPPLMKTSKLSN----SLKYLTQAYLGYDIQIGI--QDPYDDCVATMRLY 298
DTA+ L + + L SL+ L+Q LG IQ + + +D ATM LY
Sbjct: 108 YDTAQDRLLWREADLHYCRRVSLRLLSQRLLGRRIQDSVLGHNSVEDARATMELY 162
>UNIPROTKB|E1BNM5 [details] [associations]
symbol:ISG20 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016605 "PML body" evidence=IEA] [GO:0009615 "response
to virus" evidence=IEA] [GO:0008310 "single-stranded DNA specific
3'-5' exodeoxyribonuclease activity" evidence=IEA] [GO:0006401 "RNA
catabolic process" evidence=IEA] [GO:0000738 "DNA catabolic
process, exonucleolytic" evidence=IEA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0016605 GO:GO:0003676
GO:GO:0009615 GO:GO:0006401 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 GO:GO:0000175 GO:GO:0000738
GO:GO:0008310 CTD:3669 KO:K12579 EMBL:DAAA02052106 IPI:IPI00695516
RefSeq:XP_002696560.1 RefSeq:XP_583075.1 UniGene:Bt.22275
ProteinModelPortal:E1BNM5 Ensembl:ENSBTAT00000019639 GeneID:506604
KEGG:bta:506604 NextBio:20867677 Uniprot:E1BNM5
Length = 171
Score = 123 (48.4 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 44/175 (25%), Positives = 74/175 (42%)
Query: 130 RDPQVVAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIRP 189
R VVA+ C+MV R ++D + ++++ +++P +T YR +GI
Sbjct: 3 RSADVVAMDCEMVGLGPFRESGLA-RCSLVDYHGSVLYDKFIRPEGDITDYRTPVSGITA 61
Query: 190 EHLRDAIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIMT 249
++ A P + +I L + +++VGH L HD L+
Sbjct: 62 RNMEGATPFAVARLEILQVL--------------KGKLVVGHDLKHDFKALKENMSDYAI 107
Query: 250 RDTAKYPPLMKTSKLSN----SLKYLTQAYLGYDIQIGI--QDPYDDCVATMRLY 298
DTA L + + L SL+ L+Q LG IQ + + +D A M LY
Sbjct: 108 YDTAADRRLWREAGLQYCRRVSLRVLSQRLLGRRIQDSVLGHNSVEDARAAMELY 162
>POMBASE|SPAC637.09 [details] [associations]
symbol:SPAC637.09 "ribonuclease H70 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000467
"exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006396
"RNA processing" evidence=ISO] [GO:0008408 "3'-5' exonuclease
activity" evidence=ISO] [GO:0034415 "tRNA 3'-trailer cleavage,
exonucleolytic" evidence=ISO] [GO:0034476 "U5 snRNA 3'-end
processing" evidence=ISO] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 PomBase:SPAC637.09 Pfam:PF00929 GO:GO:0005634
EMBL:CU329670 GO:GO:0003676 eggNOG:COG0847 InterPro:IPR013520
SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0000467 GO:GO:0034476
OrthoDB:EOG4MKRQF GO:GO:0034415 PIR:T39001 RefSeq:NP_594627.2
STRING:O94443 EnsemblFungi:SPAC637.09.1 GeneID:2543505
HOGENOM:HOG000165759 NextBio:20804515 Uniprot:O94443
Length = 631
Score = 141 (54.7 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 51/176 (28%), Positives = 85/176 (48%)
Query: 131 DPQVVAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIRPE 190
+P+++AI C+MV RV I+D +I+ +VKP PVT Y + +GI E
Sbjct: 273 NPKILAIDCEMVRTENGLEIA---RVTIVDMKSEVIYDEFVKPESPVTDYVTQYSGITEE 329
Query: 191 HLRDAIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIMTR 250
LR+ + V +Q +L + +L+GH L+ DL+ L+ +P I+
Sbjct: 330 KLRN---VTTVLSDVQSYL---------KKTVDNNTVLLGHSLNSDLNCLKFTHPHII-- 375
Query: 251 DTAKYPPLMKTSKLSNSLKYLTQAYLGYDIQ----IGIQDPYDDCVATMRLYMRMK 302
DTA + SLK+L +L +IQ +G D +D +A + L +++K
Sbjct: 376 DTANIYNHTRGPPSKPSLKWLATKWLRREIQKAGALG-HDSAEDALACVDL-LKLK 429
>TAIR|locus:2169717 [details] [associations]
symbol:SDN2 "small RNA degrading nuclease 2" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003676 GO:GO:0004527 GO:GO:0090305 eggNOG:COG0847
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AB005241 KO:K14570
HOGENOM:HOG000083886 EMBL:BT009685 EMBL:AK118437 IPI:IPI00548498
IPI:IPI00892313 RefSeq:NP_001119175.1 RefSeq:NP_196173.1
UniGene:At.43773 ProteinModelPortal:Q9FFG1 SMR:Q9FFG1 IntAct:Q9FFG1
PaxDb:Q9FFG1 PRIDE:Q9FFG1 EnsemblPlants:AT5G05540.1 GeneID:830437
KEGG:ath:AT5G05540 TAIR:At5g05540 InParanoid:Q9FFG1 OMA:QAFENIA
PhylomeDB:Q9FFG1 ProtClustDB:CLSN2686647 Genevestigator:Q9FFG1
Uniprot:Q9FFG1
Length = 466
Score = 139 (54.0 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 50/174 (28%), Positives = 78/174 (44%)
Query: 133 QVVAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIRPEHL 192
+++AI C+MV RV +D +I +VKP PV YR TG+ + L
Sbjct: 141 EMIAIDCEMVLCEDGSEAVV--RVAAVDRDLKVILDEFVKPNQPVVDYRTFITGLTAQDL 198
Query: 193 RDA-IPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIMTRD 251
A I + +Q K+ F+ S ILVG L+HDL L+V++ ++
Sbjct: 199 EKATISVVDIQEKLLMFI-------------SEDTILVGQSLNHDLKVLKVDHARVIDTS 245
Query: 252 TA---KYPPLMKTSKLSN-SLKYLTQAYLGYDIQI-GI-QDPYDDCVATMRLYM 299
Y + +L SL YL + LGY++Q G+ + D A M+L +
Sbjct: 246 LVFKYNYDGTRRPLRLKRPSLNYLCKCILGYEVQKEGVPHNCVHDAEAAMKLVL 299
>TAIR|locus:2155563 [details] [associations]
symbol:SDN3 "small RNA degrading nuclease 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0016592 "mediator complex" evidence=IDA]
InterPro:IPR006055 InterPro:IPR012337 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00479 Pfam:PF00929 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723 GO:GO:0004527
GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
EMBL:AB020742 GO:GO:0016592 KO:K14570 UniGene:At.28408
UniGene:At.71151 EMBL:AY080843 EMBL:BT001977 IPI:IPI00524191
RefSeq:NP_201525.2 ProteinModelPortal:Q8RXK2 SMR:Q8RXK2
IntAct:Q8RXK2 STRING:Q8RXK2 PaxDb:Q8RXK2 PRIDE:Q8RXK2
EnsemblPlants:AT5G67240.1 GeneID:836859 KEGG:ath:AT5G67240
TAIR:At5g67240 HOGENOM:HOG000154279 InParanoid:Q8RXK2 OMA:LYVRKMV
PhylomeDB:Q8RXK2 ProtClustDB:CLSN2918891 Genevestigator:Q8RXK2
Uniprot:Q8RXK2
Length = 782
Score = 140 (54.3 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 50/191 (26%), Positives = 89/191 (46%)
Query: 113 LANLGVRDSLTIDNTHTRDPQVVAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVK 172
+ LG + S I +T ++++I C+MV RV +D ++ +VK
Sbjct: 129 VTELGKKKSKVIKST-----RMLSIDCEMVTCEDGSQALV--RVGAVDRDLKVVLDKFVK 181
Query: 173 PPIPVTSYRYETTGIRPEHL-RDAIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGH 231
P PV Y+ + TG+ E L R + + +Q+K++ FL G ILVGH
Sbjct: 182 PDKPVIDYKTDITGVTAEDLERATLSVADIQKKLRRFLSVGT-------------ILVGH 228
Query: 232 GLDHDLDRLQVEYPAIMTRDTAKYPPLMKTSKLSN-SLKYLTQAYLGYDIQI--GIQDPY 288
GL +DL L++++ ++ DT+ + K SL L ++ LG ++++ +
Sbjct: 229 GLHNDLQVLRIDHARVI--DTSYVFEFVDAPKTQRPSLNNLCKSVLGQEVRMDGAAHNCV 286
Query: 289 DDCVATMRLYM 299
D A M+L +
Sbjct: 287 HDAAAAMKLVL 297
>POMBASE|SPAC1782.08c [details] [associations]
symbol:rex3 "exonuclease Rex3 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0000467 "exonucleolytic trimming to
generate mature 3'-end of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0006396
"RNA processing" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISO] [GO:0034476 "U5 snRNA 3'-end processing"
evidence=ISO] [GO:0043628 "ncRNA 3'-end processing" evidence=ISO]
InterPro:IPR000571 InterPro:IPR006055 InterPro:IPR012337
PROSITE:PS50103 SMART:SM00479 PomBase:SPAC1782.08c Pfam:PF00929
GO:GO:0005739 GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 eggNOG:COG0847
InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0000467
GO:GO:0034476 PIR:T50098 RefSeq:NP_594715.1
ProteinModelPortal:Q9P7H2 EnsemblFungi:SPAC1782.08c.1
GeneID:2542165 KEGG:spo:SPAC1782.08c OMA:CETANSK OrthoDB:EOG48KVM8
NextBio:20803237 Uniprot:Q9P7H2
Length = 540
Score = 136 (52.9 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 43/151 (28%), Positives = 76/151 (50%)
Query: 155 RVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIRP-EHLRDAIPLKQVQRKIQDFLCNGE 213
R+ ++ + E+II ++KP + S +GI + L I + Q+ KI++ N
Sbjct: 400 RLTVVAK-ESIIMDVFIKPKGKILSLNTRFSGIHDAKELESGITMDQMYIKIKELGMN-- 456
Query: 214 PMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIMTRDTAKYPPLMKTSKLSNSLKYLTQ 273
+ IL+GHGL++DL+ +++ + ++ DTA + SLKYLT+
Sbjct: 457 ----------KNTILIGHGLENDLNAMRLIHKRVI--DTALLFTHARGPPFRYSLKYLTK 504
Query: 274 AYLGYDIQIGIQDPYDDCVATMRL-YMRMKS 303
YLG IQ D +D V+ ++L + + KS
Sbjct: 505 KYLGTTIQTSTHDSEEDAVSALQLVFYKTKS 535
>UNIPROTKB|G3N2Q8 [details] [associations]
symbol:ISG20 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016605 "PML body" evidence=IEA] [GO:0009615 "response
to virus" evidence=IEA] [GO:0008310 "single-stranded DNA specific
3'-5' exodeoxyribonuclease activity" evidence=IEA] [GO:0006401 "RNA
catabolic process" evidence=IEA] [GO:0000738 "DNA catabolic
process, exonucleolytic" evidence=IEA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0016605 GO:GO:0003676
GO:GO:0009615 GO:GO:0006401 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 GO:GO:0000175 GO:GO:0000738
GO:GO:0008310 OMA:ARCSLVD EMBL:DAAA02052106
Ensembl:ENSBTAT00000065058 Uniprot:G3N2Q8
Length = 181
Score = 123 (48.4 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 44/175 (25%), Positives = 74/175 (42%)
Query: 130 RDPQVVAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIRP 189
R VVA+ C+MV R ++D + ++++ +++P +T YR +GI
Sbjct: 3 RSADVVAMDCEMVGLGPFRESGLA-RCSLVDYHGSVLYDKFIRPEGDITDYRTPVSGITA 61
Query: 190 EHLRDAIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIMT 249
++ A P + +I L + +++VGH L HD L+
Sbjct: 62 RNMEGATPFAVARLEILQVL--------------KGKLVVGHDLKHDFKALKENMSDYAI 107
Query: 250 RDTAKYPPLMKTSKLSN----SLKYLTQAYLGYDIQIGI--QDPYDDCVATMRLY 298
DTA L + + L SL+ L+Q LG IQ + + +D A M LY
Sbjct: 108 YDTAADRRLWREAGLQYCRRVSLRVLSQRLLGRRIQDSVLGHNSVEDARAAMELY 162
>DICTYBASE|DDB_G0281327 [details] [associations]
symbol:rexo4 "RNA exonuclease 4" species:44689
"Dictyostelium discoideum" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0090305 "nucleic acid phosphodiester bond
hydrolysis" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004518
"nuclease activity" evidence=IEA] InterPro:IPR012337
dictyBase:DDB_G0281327 Pfam:PF00929 GO:GO:0005634
GenomeReviews:CM000152_GR EMBL:AAFI02000040 GO:GO:0003676
GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
GO:GO:0004518 RefSeq:XP_640882.1 ProteinModelPortal:Q54U94
STRING:Q54U94 EnsemblProtists:DDB0305008 GeneID:8622938
KEGG:ddi:DDB_G0281327 OMA:NDIPESQ Uniprot:Q54U94
Length = 298
Score = 130 (50.8 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 46/156 (29%), Positives = 74/156 (47%)
Query: 124 IDNTHTRDPQVVAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYE 183
IDN + + +I CK++ G+VCI ++ II+ VKP + +R +
Sbjct: 116 IDNLN-ESSKFFSIDCKIIEIEGNKGTL--GKVCIANQNGQIIYEKIVKPMDKIVDFRTK 172
Query: 184 TTGIRPEHLRDAIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVE 243
TG+ RD +VQR+ DFL + + KI R +ILVGH L HDL L++
Sbjct: 173 FTGLT----RD-----KVQREGTDFLQVQKEVEKIL----RHKILVGHDLVHDLKNLKLA 219
Query: 244 YPAIMTRDTAKYPPLMKTSKLS-NSLKYLTQAYLGY 278
+ + RD ++ S +SLK + + L +
Sbjct: 220 HKKKLLRDATQFTKFFNPDTNSEDSLKSIAKRELNF 255
>UNIPROTKB|H0YMJ6 [details] [associations]
symbol:AEN "Apoptosis-enhancing nuclease" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR012337 Pfam:PF00929 GO:GO:0005730
GO:GO:0003676 EMBL:AC013489 HGNC:HGNC:25722 InterPro:IPR013520
SUPFAM:SSF53098 Ensembl:ENST00000559528 Bgee:H0YMJ6 Uniprot:H0YMJ6
Length = 179
Score = 120 (47.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 21/69 (30%), Positives = 37/69 (53%)
Query: 135 VAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIRPEHLRD 194
VAI C+MV R I+ + N+++ Y++P +P+ YR +GI +H+R
Sbjct: 111 VAIDCEMVGTGPRGRVSELARCSIVSYHGNVLYDKYIRPEMPIADYRTRWSGITRQHMRK 170
Query: 195 AIPLKQVQR 203
A+P + Q+
Sbjct: 171 AVPFQVAQK 179
>MGI|MGI:1928895 [details] [associations]
symbol:Isg20 "interferon-stimulated protein" species:10090
"Mus musculus" [GO:0000175 "3'-5'-exoribonuclease activity"
evidence=ISO] [GO:0000738 "DNA catabolic process, exonucleolytic"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004518 "nuclease
activity" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006401 "RNA catabolic process" evidence=ISO] [GO:0008310
"single-stranded DNA specific 3'-5' exodeoxyribonuclease activity"
evidence=ISO] [GO:0008859 "exoribonuclease II activity"
evidence=IEA] [GO:0009615 "response to virus" evidence=ISO]
[GO:0016605 "PML body" evidence=ISO] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0045087 "innate immune response"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
MGI:MGI:1928895 GO:GO:0046872 GO:GO:0016605 GO:GO:0045087
GO:GO:0051607 GO:GO:0003723 GO:GO:0006401 eggNOG:COG0847
HOGENOM:HOG000182422 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 GO:GO:0006364 GO:GO:0000175
GO:GO:0000738 GO:GO:0008310 GO:GO:0008859 CTD:3669 KO:K12579
OrthoDB:EOG4M91SN EMBL:AF217484 EMBL:AK008139 EMBL:AK008171
EMBL:AK008353 EMBL:BC022751 IPI:IPI00123340 IPI:IPI00467269
RefSeq:NP_001106999.1 RefSeq:NP_065608.2 UniGene:Mm.322843
ProteinModelPortal:Q9JL16 SMR:Q9JL16 STRING:Q9JL16
PhosphoSite:Q9JL16 PaxDb:Q9JL16 PRIDE:Q9JL16
Ensembl:ENSMUST00000038142 Ensembl:ENSMUST00000118867
Ensembl:ENSMUST00000120331 Ensembl:ENSMUST00000121645 GeneID:57444
KEGG:mmu:57444 UCSC:uc009hxt.1 InParanoid:Q9JL16 OMA:LNFILIQ
NextBio:313851 Bgee:Q9JL16 CleanEx:MM_ISG20 Genevestigator:Q9JL16
GermOnline:ENSMUSG00000039236 Uniprot:Q9JL16
Length = 300
Score = 128 (50.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 39/155 (25%), Positives = 72/155 (46%)
Query: 132 PQVVAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIRPEH 191
P+VVA+ C+MV R I++ + +++ Y++P +T YR + +G+ P+H
Sbjct: 5 PEVVAMDCEMVGLGPQRVSGLA-RCSIVNIHGAVLYDKYIRPEGEITDYRTQVSGVTPQH 63
Query: 192 LRDAIPLKQVQRKIQDFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIMTRD 251
+ A P + + +I L + +++VGH L HD + L+ + D
Sbjct: 64 MVRATPFGEARLEILQLL--------------KGKLVVGHDLKHDFNALKEDMSKYTIYD 109
Query: 252 TAKYPPLMKTSKLSN----SLKYLTQAYLGYDIQI 282
T+ L +KL SL+ L + L +IQ+
Sbjct: 110 TSTDRLLWHEAKLQYYSRVSLRLLCKRLLHKNIQV 144
>DICTYBASE|DDB_G0291590 [details] [associations]
symbol:rexo1 "RNA exonuclease 1" species:44689
"Dictyostelium discoideum" [GO:0005622 "intracellular"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016070 "RNA
metabolic process" evidence=IC] [GO:0008408 "3'-5' exonuclease
activity" evidence=ISS] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 dictyBase:DDB_G0291590 Pfam:PF00929 EMBL:AAFI02000177
GenomeReviews:CM000155_GR GO:GO:0003676 GO:GO:0005622
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0016070
GO:GO:0008408 KO:K14570 RefSeq:XP_635319.1
ProteinModelPortal:Q54EC1 EnsemblProtists:DDB0305007 GeneID:8628263
KEGG:ddi:DDB_G0291590 InParanoid:Q54EC1 OMA:EMLAIDC Uniprot:Q54EC1
Length = 694
Score = 130 (50.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 61/235 (25%), Positives = 103/235 (43%)
Query: 87 DGPNARRLHQERCQMVSSATTGLNARLANLGVRDSLTIDNTHTRDPQVVAIACKMVXXXX 146
D N +E S TT +N+ N ++L I+ + + +++AI C+M
Sbjct: 282 DDDNNNNNQEEDNGASSPTTTTVNSDDDNNDNNNNL-INKLNLKVKEMLAIDCEMCRTEG 340
Query: 147 XXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIRPEHLRDAIPLKQVQRKIQ 206
R+ I++E + ++ + V P P+ Y + +GI + LK V ++
Sbjct: 341 GQLELT--RISIVNEQKKVVLNELVLPEKPIIDYLTQYSGITAD------TLKNVTNRLS 392
Query: 207 DFLCNGEPMWKIRPRGSRARILVGHGLDHDLDRLQVEYPAIMTRDTAKYPPLMKTSKLSN 266
D E + + +L+GH L++DL ++ + I+ DT+ P + K S
Sbjct: 393 DIHAKLEKLVGVDT------VLIGHSLENDLKAMKFIHRKII--DTSILYPTGSSGKFS- 443
Query: 267 SLKYLTQAYLGYDIQ------IGIQDPYDDCVATMRLYMRMKSQAHKREDYPLAS 315
LKYLT+ YL IQ +G D +D A M L ++K Q K LAS
Sbjct: 444 -LKYLTKKYLNRIIQSTKHGKLG-HDSIEDARAAMDL-AQLKIQKGKSFGTRLAS 495
>TAIR|locus:2083153 [details] [associations]
symbol:AT3G50090 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003676 GO:GO:0004527 GO:GO:0090305 eggNOG:COG0847
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AL132978 KO:K14570
HOGENOM:HOG000083886 IPI:IPI00524773 PIR:T45862 RefSeq:NP_190578.1
UniGene:At.53865 ProteinModelPortal:Q9SN09 SMR:Q9SN09
EnsemblPlants:AT3G50090.1 GeneID:824171 KEGG:ath:AT3G50090
TAIR:At3g50090 InParanoid:Q9SN09 OMA:FLHRIPH PhylomeDB:Q9SN09
ProtClustDB:CLSN2914751 Genevestigator:Q9SN09 Uniprot:Q9SN09
Length = 322
Score = 99 (39.9 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 26/81 (32%), Positives = 40/81 (49%)
Query: 133 QVVAIACKMVXXXXXXXXXXCGRVCIIDEYENIIFHAYVKPPIPVTSYRYETTGIRPEHL 192
Q++A+ C+MV RV +D +I +VKP PV YR TG+ E +
Sbjct: 74 QMLALDCEMVLCEDGTEGVV--RVGAVDRNLKVILDEFVKPHKPVVDYRTAITGVTAEDV 131
Query: 193 RDA-IPLKQVQRKIQDFLCNG 212
+ A + L +Q K++ FL G
Sbjct: 132 QKATLSLVDIQEKLRPFLSAG 152
Score = 54 (24.1 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 18/59 (30%), Positives = 29/59 (49%)
Query: 242 VEYPAIM-TRDTAKYPPLMKTSKLSNSLKYLTQAYLGYDIQ-IGIQDP-YDDCVATMRL 297
+++P ++ T KYP K + SL L + LGY++Q G+ D A M+L
Sbjct: 156 IDHPIVIDTSLVFKYPNSRKLRR--PSLNTLCMSVLGYEVQKAGVSHHCVHDAAAAMKL 212
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.137 0.431 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 354 344 0.00097 116 3 11 22 0.48 33
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 61
No. of states in DFA: 621 (66 KB)
Total size of DFA: 264 KB (2139 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 31.46u 0.12s 31.58t Elapsed: 00:00:02
Total cpu time: 31.47u 0.12s 31.59t Elapsed: 00:00:02
Start: Mon May 20 19:01:16 2013 End: Mon May 20 19:01:18 2013