BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018565
(354 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1FP2|A Chain A, Crystal Structure Analysis Of Isoflavone
O-Methyltransferase
Length = 352
Score = 205 bits (521), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 115/343 (33%), Positives = 187/343 (54%), Gaps = 11/343 (3%)
Query: 17 AKVEIWKYVFGFTNMAVVKCAVELGIAEAVEEKGSPITLNELASALKCDPSLL---QRIM 73
A+ ++K+++ F + +K AVE+ I ++ G PI+L+ L S L+ S + +R+M
Sbjct: 16 AQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKIGNVRRLM 75
Query: 74 RFLIHLKFFKEVPTSQGSMAFQQTPLSRRLMRHGENNMAAFILLESSPVMLAPWHSLGTR 133
R+L H FF+ + + S A T S L+R + +A + P + +H L
Sbjct: 76 RYLAHNGFFEIITKEEESYAL--TVASELLVRGSDLCLAPMVECVLDPTLSGSYHELKKW 133
Query: 134 VLANGTSAFDKAHGKDVWSYAAADAAHSKLINDAMACDTRLAMRAIIEGCPEVFDGIETL 193
+ + F G W + + ++ NDAMA D++L A+ C VFDG+E++
Sbjct: 134 IYEEDLTLFGVTLGSGFWDFLDKNPEYNTSFNDAMASDSKLINLAL-RDCDFVFDGLESI 192
Query: 194 VDIGGNDGTTLRTLTKAFPRIRGINFDLPHVVCVAEKCHGVEHVGGDMFDGVPEADAAII 253
VD+GG GTT + + + FP+++ I FD P VV + + +VGGDMF +P ADA ++
Sbjct: 193 VDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFTSIPNADAVLL 252
Query: 254 KWVLHDWGDDECIKILKNCKEAITKD--KGKXXXXXXXXXXXXXXXNKFKSVRLMLDMVM 311
K++LH+W D +C++ILK CKEA+T D +GK N+ ++L++D V
Sbjct: 253 KYILHNWTDKDCLRILKKCKEAVTNDGKRGK-VTIIDMVIDKKKDENQVTQIKLLMD-VN 310
Query: 312 MAHTNKGKERSLKEWDYVLRQAGFSRYNITSIHAVQSLIEAFP 354
MA N GKER+ +EW + +AGF Y I+ + SLIE +P
Sbjct: 311 MACLN-GKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIYP 352
>pdb|2QYO|A Chain A, Crystal Structure Of Isoflavone O-Methyltransferase
Homolog In Complex With Biochanin A And Sah
pdb|2QYO|B Chain B, Crystal Structure Of Isoflavone O-Methyltransferase
Homolog In Complex With Biochanin A And Sah
Length = 357
Score = 198 bits (503), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 119/348 (34%), Positives = 193/348 (55%), Gaps = 16/348 (4%)
Query: 17 AKVEIWKYVFGFTNMAVVKCAVELGIAEAVEEKGSPITLNELASALKCDPSL----LQRI 72
A+ ++K ++ F + +K ++E+ I + G PITL+ L S L+ PS +QR+
Sbjct: 16 AQALLYKNMYAFVDSMSLKWSIEMNIPNIIHNHGKPITLSNLVSILQI-PSTKVDNVQRL 74
Query: 73 MRFLIHLKFFKEVPTSQG----SMAFQQTPLSRRLMRHGENNMAAFILLESSPVMLAPWH 128
MR+L H FF E+ T+Q A+ T S L++ E +A + P + +H
Sbjct: 75 MRYLAHNGFF-EIITNQELENEEEAYALTVASELLVKGTELCLAPMVECVLDPTLSTSFH 133
Query: 129 SLGTRVLANGTSAFDKAHGKDVWSYAAADAAHSKLINDAMACDTRLAMRAIIEGCPEVFD 188
+L V + F G D+W + + ++ L NDA+A D+++ A+ + C VF+
Sbjct: 134 NLKKWVYEEDLTLFAVNLGCDLWEFLNKNPEYNTLYNDALASDSKMINLAM-KDCNLVFE 192
Query: 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDLPHVVCVAEKCHGVEHVGGDMFDGVPEA 248
G+E++VD+GG +GTT + + + FP++ + FD P VV + + +VGGDMF VP+A
Sbjct: 193 GLESIVDVGGGNGTTGKIICETFPKLTCVVFDRPKVVENLCGSNNLTYVGGDMFISVPKA 252
Query: 249 DAAIIKWVLHDWGDDECIKILKNCKEAITKD--KGKXXXXXXXXXXXXXXXNKFKSVRLM 306
DA ++K VLHDW D +CIKILK CKEA+T D +GK N+ ++L+
Sbjct: 253 DAVLLKAVLHDWTDKDCIKILKKCKEAVTSDGKRGK-VIVIDMVINEKKDENQLTQIKLL 311
Query: 307 LDMVMMAHTNKGKERSLKEWDYVLRQAGFSRYNITSIHAVQSLIEAFP 354
++ V ++ N GKER+ +EW + +AGF Y I+ + SLIE +P
Sbjct: 312 MN-VTISCVN-GKERNEEEWKKLFIEAGFQDYKISPFTGLMSLIEIYP 357
>pdb|1ZGA|A Chain A, Crystal Structure Of Isoflavanone 4'-o-methyltransferase
Complexed With (+)-6a-hydroxymaackiain
pdb|1ZHF|A Chain A, Crystal Structure Of Selenomethionine Substituted
Isoflavanone 4'-O- Methyltransferase
Length = 357
Score = 197 bits (502), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 123/351 (35%), Positives = 188/351 (53%), Gaps = 15/351 (4%)
Query: 17 AKVEIWKYVFGFTNMAVVKCAVELGIAEAVEEKGSPITLNELASALKCDPS---LLQRIM 73
A++ ++K+V+ F + +K A+ELGIA+A+ G P+TL+ELAS+LK PS +L R +
Sbjct: 9 AQIHLYKHVYNFVSSMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPSKVNILHRFL 68
Query: 74 RFLIHLKFFKEV------PTSQGSMAFQQTPLSRRLMRHGENNMAAFILLESSPVMLAPW 127
R L H FF + + +A+ TP S+ L+ +++ + P L W
Sbjct: 69 RLLTHNGFFAKTIVKGKEGDEEEEIAYSLTPPSKLLISGKPTCLSSIVKGALHPSSLDMW 128
Query: 128 HSLGTRVLANG-TSAFDKAHGKDVWSYAAADAAHSKL--INDAMACDTRLAMRAIIEGCP 184
S + + F+ A G+ W + D+ S L DAMA D+R+ + +++
Sbjct: 129 SSSKKWFNEDKEQTLFECATGESFWDFLNKDSESSTLSMFQDAMASDSRM-FKLVLQENK 187
Query: 185 EVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDLPHVVCVAEKCHGVEHVGGDMFDG 244
VF+G+E+LVD+GG G + + + FP ++ FD P VV + VGGDMF
Sbjct: 188 RVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGDMFKS 247
Query: 245 VPEADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKXXXXXXXXXXXXXXXNKFKSVR 304
+P ADA ++KWVLHDW D++ +KILKN KEAI+ KGK +
Sbjct: 248 IPSADAVLLKWVLHDWNDEQSLKILKNSKEAISH-KGKDGKVIIIDISIDETSDDRGLTE 306
Query: 305 LMLDM-VMMAHTNKGKERSLKEWDYVLRQAGFSRYNITSIHAVQSLIEAFP 354
L LD ++M GKER+ +EW+ ++ AGFS Y IT I +SLIE +P
Sbjct: 307 LQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSSYKITPISGFKSLIEVYP 357
>pdb|1ZG3|A Chain A, Crystal Structure Of The Isoflavanone
4'-O-Methyltransferase Complexed With Sah And
2,7,4'-Trihydroxyisoflavanone
Length = 358
Score = 197 bits (502), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 123/351 (35%), Positives = 188/351 (53%), Gaps = 15/351 (4%)
Query: 17 AKVEIWKYVFGFTNMAVVKCAVELGIAEAVEEKGSPITLNELASALKCDPS---LLQRIM 73
A++ ++K+V+ F + +K A+ELGIA+A+ G P+TL+ELAS+LK PS +L R +
Sbjct: 10 AQIHLYKHVYNFVSSMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPSKVNILHRFL 69
Query: 74 RFLIHLKFFKEV------PTSQGSMAFQQTPLSRRLMRHGENNMAAFILLESSPVMLAPW 127
R L H FF + + +A+ TP S+ L+ +++ + P L W
Sbjct: 70 RLLTHNGFFAKTIVKGKEGDEEEEIAYSLTPPSKLLISGKPTCLSSIVKGALHPSSLDMW 129
Query: 128 HSLGTRVLANG-TSAFDKAHGKDVWSYAAADAAHSKL--INDAMACDTRLAMRAIIEGCP 184
S + + F+ A G+ W + D+ S L DAMA D+R+ + +++
Sbjct: 130 SSSKKWFNEDKEQTLFECATGESFWDFLNKDSESSTLSMFQDAMASDSRM-FKLVLQENK 188
Query: 185 EVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDLPHVVCVAEKCHGVEHVGGDMFDG 244
VF+G+E+LVD+GG G + + + FP ++ FD P VV + VGGDMF
Sbjct: 189 RVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGDMFKS 248
Query: 245 VPEADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKXXXXXXXXXXXXXXXNKFKSVR 304
+P ADA ++KWVLHDW D++ +KILKN KEAI+ KGK +
Sbjct: 249 IPSADAVLLKWVLHDWNDEQSLKILKNSKEAISH-KGKDGKVIIIDISIDETSDDRGLTE 307
Query: 305 LMLDM-VMMAHTNKGKERSLKEWDYVLRQAGFSRYNITSIHAVQSLIEAFP 354
L LD ++M GKER+ +EW+ ++ AGFS Y IT I +SLIE +P
Sbjct: 308 LQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSSYKITPISGFKSLIEVYP 358
>pdb|1ZGJ|A Chain A, Crystal Structure Of Isoflavanone 4'-O-Methyltransferase
Complexed With (+)-Pisatin
Length = 354
Score = 197 bits (501), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 123/351 (35%), Positives = 188/351 (53%), Gaps = 15/351 (4%)
Query: 17 AKVEIWKYVFGFTNMAVVKCAVELGIAEAVEEKGSPITLNELASALKCDPS---LLQRIM 73
A++ ++K+V+ F + +K A+ELGIA+A+ G P+TL+ELAS+LK PS +L R +
Sbjct: 6 AQIHLYKHVYNFVSSMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPSKVNILHRFL 65
Query: 74 RFLIHLKFFKEV------PTSQGSMAFQQTPLSRRLMRHGENNMAAFILLESSPVMLAPW 127
R L H FF + + +A+ TP S+ L+ +++ + P L W
Sbjct: 66 RLLTHNGFFAKTIVKGKEGDEEEEIAYSLTPPSKLLISGKPTCLSSIVKGALHPSSLDMW 125
Query: 128 HSLGTRVLANG-TSAFDKAHGKDVWSYAAADAAHSKL--INDAMACDTRLAMRAIIEGCP 184
S + + F+ A G+ W + D+ S L DAMA D+R+ + +++
Sbjct: 126 SSSKKWFNEDKEQTLFECATGESFWDFLNKDSESSTLSMFQDAMASDSRM-FKLVLQENK 184
Query: 185 EVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDLPHVVCVAEKCHGVEHVGGDMFDG 244
VF+G+E+LVD+GG G + + + FP ++ FD P VV + VGGDMF
Sbjct: 185 RVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGDMFKS 244
Query: 245 VPEADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKXXXXXXXXXXXXXXXNKFKSVR 304
+P ADA ++KWVLHDW D++ +KILKN KEAI+ KGK +
Sbjct: 245 IPSADAVLLKWVLHDWNDEQSLKILKNSKEAISH-KGKDGKVIIIDISIDETSDDRGLTE 303
Query: 305 LMLDM-VMMAHTNKGKERSLKEWDYVLRQAGFSRYNITSIHAVQSLIEAFP 354
L LD ++M GKER+ +EW+ ++ AGFS Y IT I +SLIE +P
Sbjct: 304 LQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSSYKITPISGFKSLIEVYP 354
>pdb|1FPX|A Chain A, Crystal Structure Analysis Of Selenomethionine Substituted
Isoflavone O-Methyltransferase
Length = 352
Score = 192 bits (487), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 112/343 (32%), Positives = 182/343 (53%), Gaps = 11/343 (3%)
Query: 17 AKVEIWKYVFGFTNMAVVKCAVELGIAEAVEEKGSPITLNELASALKCDPSLL---QRIM 73
A+ ++K+++ F + +K AVE I ++ G PI+L+ L S L+ S + +R+
Sbjct: 16 AQALLYKHIYAFIDSXSLKWAVEXNIPNIIQNHGKPISLSNLVSILQVPSSKIGNVRRLX 75
Query: 74 RFLIHLKFFKEVPTSQGSMAFQQTPLSRRLMRHGENNMAAFILLESSPVMLAPWHSLGTR 133
R+L H FF+ + + S A T S L+R + +A + P + +H L
Sbjct: 76 RYLAHNGFFEIITKEEESYAL--TVASELLVRGSDLCLAPXVECVLDPTLSGSYHELKKW 133
Query: 134 VLANGTSAFDKAHGKDVWSYAAADAAHSKLINDAMACDTRLAMRAIIEGCPEVFDGIETL 193
+ + F G W + + ++ NDA A D++L A+ C VFDG+E++
Sbjct: 134 IYEEDLTLFGVTLGSGFWDFLDKNPEYNTSFNDAXASDSKLINLAL-RDCDFVFDGLESI 192
Query: 194 VDIGGNDGTTLRTLTKAFPRIRGINFDLPHVVCVAEKCHGVEHVGGDMFDGVPEADAAII 253
VD+GG GTT + + + FP+++ I FD P VV + + +VGGD F +P ADA ++
Sbjct: 193 VDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDXFTSIPNADAVLL 252
Query: 254 KWVLHDWGDDECIKILKNCKEAITKD--KGKXXXXXXXXXXXXXXXNKFKSVRLMLDMVM 311
K++LH+W D +C++ILK CKEA+T D +GK N+ ++L+ D V
Sbjct: 253 KYILHNWTDKDCLRILKKCKEAVTNDGKRGK-VTIIDXVIDKKKDENQVTQIKLLXD-VN 310
Query: 312 MAHTNKGKERSLKEWDYVLRQAGFSRYNITSIHAVQSLIEAFP 354
A N GKER+ +EW + +AGF Y I+ + SLIE +P
Sbjct: 311 XACLN-GKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIYP 352
>pdb|3REO|A Chain A, Monolignol O-Methyltransferase (Momt)
pdb|3REO|B Chain B, Monolignol O-Methyltransferase (Momt)
pdb|3REO|C Chain C, Monolignol O-Methyltransferase (Momt)
pdb|3REO|D Chain D, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|A Chain A, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|B Chain B, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|C Chain C, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|D Chain D, Monolignol O-Methyltransferase (Momt)
Length = 368
Score = 187 bits (476), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 107/321 (33%), Positives = 171/321 (53%), Gaps = 16/321 (4%)
Query: 34 VKCAVELGIAEAVEEKGSP---ITLNELASALKCD----PSLLQRIMRFLIHLKF----F 82
+K A+EL + E + + P I+ E+A+ L P +L R++R L
Sbjct: 38 LKAAIELDVLEIMAKSVPPSGYISPAEIAAQLPTTNPEAPVMLDRVLRLLASYSVVTYTL 97
Query: 83 KEVPTSQGSMAFQQTPLSRRLMRHGEN-NMAAFILLESSPVMLAPWHSLGTRVLANGTSA 141
+E+P+ + + P+ + L ++ + ++A F+LL + V+L PW L +L G
Sbjct: 98 RELPSGKVERLYGLAPVCKFLTKNEDGVSLAPFLLLATDKVLLEPWFYLKDAILEGGIP- 156
Query: 142 FDKAHGKDVWSYAAADAAHSKLINDAMACDTRLAMRAIIEGCPEVFDGIETLVDIGGNDG 201
F+KA+G +++ Y D +K+ N M+ ++ + M+ I+E F+G+ T+VD+GG G
Sbjct: 157 FNKAYGMNIFDYHGTDHRINKVFNKGMSSNSTITMKKILEMY-NGFEGLTTIVDVGGGTG 215
Query: 202 TTLRTLTKAFPRIRGINFDLPHVVCVAEKCHGVEHVGGDMFDGVPEADAAIIKWVLHDWG 261
+ +P I INFDLPHV+ A GVEH+GGDMFDGVP+ DA IKW+ HDW
Sbjct: 216 AVASMIVAKYPSINAINFDLPHVIQDAPAFSGVEHLGGDMFDGVPKGDAIFIKWICHDWS 275
Query: 262 DDECIKILKNCKEAITKDKGKXXXXXXXXXXXXXXXNKFKSVRLMLDMVMMAHTNKGKER 321
D+ C+K+LKNC A+ D GK K V + D +M+A+ GKER
Sbjct: 276 DEHCLKLLKNCYAAL-PDHGKVIVAEYILPPSPDPSIATKVV-IHTDALMLAYNPGGKER 333
Query: 322 SLKEWDYVLRQAGFSRYNITS 342
+ KE+ + +GF + + S
Sbjct: 334 TEKEFQALAMASGFRGFKVAS 354
>pdb|1KYW|A Chain A, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYW|C Chain C, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYW|F Chain F, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYZ|A Chain A, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
pdb|1KYZ|C Chain C, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
pdb|1KYZ|E Chain E, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
Length = 365
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/319 (33%), Positives = 176/319 (55%), Gaps = 15/319 (4%)
Query: 33 VVKCAVELGIAEAVEE--KGSPITLNELASALKCD----PSLLQRIMRFL-IHLKFFKEV 85
++K A+EL + E + + G+ I+ E+AS L P +L R++R L ++ V
Sbjct: 35 ILKSALELDLLEIIAKAGPGAQISPIEIASQLPTTNPDAPVMLDRMLRLLACYIILTCSV 94
Query: 86 PTSQGSMA---FQQTPLSRRLMRHGEN-NMAAFILLESSPVMLAPWHSLGTRVLANGTSA 141
T Q + +++ L+++ + +++A L+ V++ W+ L VL +G
Sbjct: 95 RTQQDGKVQRLYGLATVAKYLVKNEDGVSISALNLMNQDKVLMESWYHLKDAVL-DGGIP 153
Query: 142 FDKAHGKDVWSYAAADAAHSKLINDAMACDTRLAMRAIIEGCPEVFDGIETLVDIGGNDG 201
F+KA+G + Y D +K+ N M+ + + M+ I+E F+G+++LVD+GG G
Sbjct: 154 FNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYTG-FEGLKSLVDVGGGTG 212
Query: 202 TTLRTLTKAFPRIRGINFDLPHVVCVAEKCHGVEHVGGDMFDGVPEADAAIIKWVLHDWG 261
+ T+ +P I+GINFDLPHV+ A GVEHVGGDMF +P+ADA +KW+ HDW
Sbjct: 213 AVINTIVSKYPTIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSIPKADAVFMKWICHDWS 272
Query: 262 DDECIKILKNCKEAITKDKGKXXXXXXXXXXXXXXXNKFKSVRLMLDMVMMAHTNKGKER 321
D+ C+K LKNC EA+ D GK K V + +D++M+AH GKER
Sbjct: 273 DEHCLKFLKNCYEAL-PDNGKVIVAECILPVAPDSSLATKGV-VHIDVIMLAHNPGGKER 330
Query: 322 SLKEWDYVLRQAGFSRYNI 340
+ KE++ + + AGF + +
Sbjct: 331 TQKEFEDLAKGAGFQGFKV 349
>pdb|3P9C|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Bound To
Sah
pdb|3P9I|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|B Chain B, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|C Chain C, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|D Chain D, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9K|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|B Chain B, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|C Chain C, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|D Chain D, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
Length = 364
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/329 (32%), Positives = 168/329 (51%), Gaps = 15/329 (4%)
Query: 34 VKCAVELGIAEA-VEEKGSPITLNELASALKCD-----PSLLQRIMRFLIHLK----FFK 83
+K A+ELG+ E V G +T E+A+ L P ++ RI+R L +
Sbjct: 37 LKNAIELGLLEILVAAGGKSLTPTEVAAKLPSAANPEAPDMVDRILRLLASYNVVTCLVE 96
Query: 84 EVPTSQGSMAFQQTPLSRRLMRHGEN-NMAAFILLESSPVMLAPWHSLGTRVLANGTSAF 142
E + S ++ P+ + L + + +MAA L+ V++ W+ L VL +G F
Sbjct: 97 EGKDGRLSRSYGAAPVCKFLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVL-DGGIPF 155
Query: 143 DKAHGKDVWSYAAADAAHSKLINDAMACDTRLAMRAIIEGCPEVFDGIETLVDIGGNDGT 202
+KA+G + Y D +++ N+ M + + + ++E F+G+ TLVD+GG G
Sbjct: 156 NKAYGMSAFEYHGTDPRFNRVFNEGMKNHSIIITKKLLE-LYHGFEGLGTLVDVGGGVGA 214
Query: 203 TLRTLTKAFPRIRGINFDLPHVVCVAEKCHGVEHVGGDMFDGVPEADAAIIKWVLHDWGD 262
T+ + +P I+G+NFDLPHV+ A + GV HVGGDMF VP D ++KW+LHDW D
Sbjct: 215 TVAAIAAHYPTIKGVNFDLPHVISEAPQFPGVTHVGGDMFKEVPSGDTILMKWILHDWSD 274
Query: 263 DECIKILKNCKEAITKDKGKXXXXXXXXXXXXXXXNKFKSVRLMLDMVMMAHTNKGKERS 322
C +LKNC +A+ GK + V +DM+M+AH G+ER
Sbjct: 275 QHCATLLKNCYDALPA-HGKVVLVQCILPVNPEANPSSQGV-FHVDMIMLAHNPGGRERY 332
Query: 323 LKEWDYVLRQAGFSRYNITSIHAVQSLIE 351
+E+ + R AGF+ T I+A IE
Sbjct: 333 EREFQALARGAGFTGVKSTYIYANAWAIE 361
>pdb|1FP1|D Chain D, Crystal Structure Analysis Of Chalcone O-Methyltransferase
Length = 372
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 168/356 (47%), Gaps = 24/356 (6%)
Query: 2 EETKVQVMMKKEEDDAKVEIWKYVFGFTNMAVVKCAVELGIAEAVEEKGSP---ITLNEL 58
E+ ++ ++ ED A + AV+ A++L + E + + P ++ +E+
Sbjct: 9 EDNQISATSEQTEDSACLSAMVLTTNLVYPAVLNAAIDLNLFEIIAKATPPGAFMSPSEI 68
Query: 59 ASALKCD------PSLLQRIMRFLIHLKFF----KEVPTSQGSMAFQQTPLSRRLMR-HG 107
AS L P+ L R++R L + + + + + + L+
Sbjct: 69 ASKLPASTQHSDLPNRLDRMLRLLASYSVLTSTTRTIEDGGAERVYGLSMVGKYLVPDES 128
Query: 108 ENNMAAFILLESSPVMLAPWHSLGTRVLANGTSAFDKAHGKDVWSYAAADAAHSKLINDA 167
+A+F P +L W + V+ F HG + + D +++ N +
Sbjct: 129 RGYLASFTTFLCYPALLQVWMNFKEAVVDEDIDLFKNVHGVTKYEFMGKDKKMNQIFNKS 188
Query: 168 MA--CDTRLA-MRAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDLPHV 224
M C T + M I G F+GI TLVD+GG G L + +P I+GINFDLP V
Sbjct: 189 MVDVCATEMKRMLEIYTG----FEGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQV 244
Query: 225 VCVAEKCHGVEHVGGDMFDGVPEADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKXX 284
+ A G+EHVGGDMF VP+ DA I+K V H+W D++CI+ L NC +A++ + GK
Sbjct: 245 IENAPPLSGIEHVGGDMFASVPQGDAMILKAVCHNWSDEKCIEFLSNCHKALSPN-GKVI 303
Query: 285 XXXXXXXXXXXXXNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQAGFSRYNI 340
+ K V + +++ + T G+ER+ K+++ + + +GFS++ +
Sbjct: 304 IVEFILPEEPNTSEESKLVSTLDNLMFI--TVGGRERTEKQYEKLSKLSGFSKFQV 357
>pdb|1FPQ|A Chain A, Crystal Structure Analysis Of Selenomethionine Substituted
Chalcone O- Methyltransferase
Length = 372
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 119/234 (50%), Gaps = 12/234 (5%)
Query: 111 MAAFILLESSPVMLAPWHSLGTRVLANGTSAFDKAHGKDVWSYAAADAAHSKLIN----D 166
+A+F P +L W + V+ F HG + + D +++ N D
Sbjct: 132 LASFTTFLCYPALLQVWXNFKEAVVDEDIDLFKNVHGVTKYEFXGKDKKXNQIFNKSXVD 191
Query: 167 AMACDTRLAMRAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDLPHVVC 226
A + + + I G F+GI TLVD+GG G L + +P I+GINFDLP V+
Sbjct: 192 VCATEXKRXLE-IYTG----FEGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIE 246
Query: 227 VAEKCHGVEHVGGDMFDGVPEADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKXXXX 286
A G+EHVGGD F VP+ DA I+K V H+W D++CI+ L NC +A++ + GK
Sbjct: 247 NAPPLSGIEHVGGDXFASVPQGDAXILKAVCHNWSDEKCIEFLSNCHKALSPN-GKVIIV 305
Query: 287 XXXXXXXXXXXNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQAGFSRYNI 340
+ K V + ++ + T G+ER+ K+++ + + +GFS++ +
Sbjct: 306 EFILPEEPNTSEESKLVSTLDNLXFI--TVGGRERTEKQYEKLSKLSGFSKFQV 357
>pdb|3GWZ|A Chain A, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|D Chain D, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|C Chain C, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|B Chain B, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GXO|A Chain A, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|D Chain D, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|C Chain C, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|B Chain B, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
Length = 369
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 115/258 (44%), Gaps = 22/258 (8%)
Query: 34 VKCAVELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMA 93
+ AVELG+ E ++E P T LA A L+R++R L + F ++
Sbjct: 55 IHVAVELGVPELLQE--GPRTATALAEATGAHEQTLRRLLRLLATVGVFDDLGHDD---L 109
Query: 94 FQQTPLSRRLMRHGENNMAAFILLESSPVMLAPWHSLGTRVLANGTSAFDKAHGKDVWSY 153
F Q LS L+ + +A +++P W L T + G ++FD A+G W
Sbjct: 110 FAQNALSAVLLPDPASPVATDARFQAAPWHWRAWEQL-THSVRTGEASFDVANGTSFWQL 168
Query: 154 AAADAAHSKLINDAMACDTRLAMRAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPR 213
D +L N A L + + F G T VDIGG G+ + AFP
Sbjct: 169 THEDPKARELFNRAXGS-VSLTEAGQVAAAYD-FSGAATAVDIGGGRGSLXAAVLDAFPG 226
Query: 214 IRGINFDLPHVV----------CVAEKCHGVEHVGGDMFDGVPE-ADAAIIKWVLHDWGD 262
+RG + P V +A++C E + GD F+ +P+ AD +IK VLHDW D
Sbjct: 227 LRGTLLERPPVAEEARELLTGRGLADRC---EILPGDFFETIPDGADVYLIKHVLHDWDD 283
Query: 263 DECIKILKNCKEAITKDK 280
D+ ++IL+ A D
Sbjct: 284 DDVVRILRRIATAXKPDS 301
>pdb|2IP2|A Chain A, Structure Of The Pyocyanin Biosynthetic Protein Phzm
pdb|2IP2|B Chain B, Structure Of The Pyocyanin Biosynthetic Protein Phzm
Length = 334
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 116/258 (44%), Gaps = 29/258 (11%)
Query: 34 VKCAVELGIAEAVEEKGSPITLNE-LASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSM 92
V A LG+A+ +E S I +E LA+A+ D + R+MR L+ + F+ T G
Sbjct: 25 VYVATRLGLADLIE---SGIDSDETLAAAVGSDAERIHRLMRLLVAFEIFQG-DTRDG-- 78
Query: 93 AFQQTPLSRRLMRHGENNMAAFILLESSPVMLAPWHSLGTRVLANGTSAFDKAHGKDVWS 152
+ TP S L+R E + +L A W + L +GT F+ A G+D +S
Sbjct: 79 -YANTPTSH-LLRDVEGSFRDMVLFYGEEFH-AAW-TPACEALLSGTPGFELAFGEDFYS 134
Query: 153 Y--AAADAAHSKLINDAMACDTRLAMRAIIEGCPEVFD-GIETLVDIGGNDGTTLRTLTK 209
Y DA L+ AM + LA I P + D + VD+GG G + + +
Sbjct: 135 YLKRCPDAGRRFLL--AMKA-SNLAFHEI----PRLLDFRGRSFVDVGGGSGELTKAILQ 187
Query: 210 AFPRIRGINFDLPHVVCVAEK-------CHGVEHVGGDMFDGVPE-ADAAIIKWVLHDWG 261
A P RG+ D + VA V VGGDM VP D ++ ++ D
Sbjct: 188 AEPSARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQEVPSNGDIYLLSRIIGDLD 247
Query: 262 DDECIKILKNCKEAITKD 279
+ +++L NC+EA+ D
Sbjct: 248 EAASLRLLGNCREAMAGD 265
>pdb|3LST|A Chain A, Crystal Structure Of Calo1, Methyltransferase In
Calicheamicin Biosynthesis, Sah Bound Form
pdb|3LST|B Chain B, Crystal Structure Of Calo1, Methyltransferase In
Calicheamicin Biosynthesis, Sah Bound Form
Length = 348
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 98/236 (41%), Gaps = 29/236 (12%)
Query: 51 SPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVP-----TSQGSMAFQQTPLSRRLMR 105
P T ELA+A D L+R++R L +E T +G+ +P+ R
Sbjct: 54 GPRTPAELAAATGTDADALRRVLRLLAVRDVVRESDGRFALTDKGAALRSDSPVPAR--- 110
Query: 106 HGENNMAAFILLESSPVMLAPWHSLGTRVLANGTSAFDKAHGKDVWSYAAADAAHSKLIN 165
A IL + H + + L AF G + +Y DA L
Sbjct: 111 -------AGILXFTDTXFWTXSHRVAS-ALGPERPAFADIFGSSLDAYFDGDAEVEALYY 162
Query: 166 DAMACDTRLAMRAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDLPHVV 225
+ +T A +I F T+ D+GG G L T+ + P ++G+ D VV
Sbjct: 163 EGX--ETVSAAEHLILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVV 220
Query: 226 C--------VAEKCHGVEHVGGDMFDGVPEADAAIIKWVLHDWGDDECIKILKNCK 273
VA + VE GD VP AD ++K +LH+WGD++ ++IL NC+
Sbjct: 221 ARHRLDAPDVAGRWKVVE---GDFLREVPHADVHVLKRILHNWGDEDSVRILTNCR 273
>pdb|4A6D|A Chain A, Crystal Structure Of Human N-Acetylserotonin
Methyltransferase (Asmt) In Complex With Sam
pdb|4A6E|A Chain A, Crystal Structure Of Human N-Acetylserotonin
Methyltransferase (Asmt) In Complex With Sam And
N-Acetylserotonin
Length = 353
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/359 (20%), Positives = 131/359 (36%), Gaps = 32/359 (8%)
Query: 10 MKKEEDDAKVEIWKYVFGFTNMAVVKCAVELGIAEAVEEKGSPITLNELASALKCDPSLL 69
M ED A + Y GF V+ A ELG+ + + E P+ + +A+ ++
Sbjct: 1 MGSSEDQAYRLLNDYANGFMVSQVLFAACELGVFDLLAEAPGPLDVAAVAAGVRASAHGT 60
Query: 70 QRIMRFLIHLKFFKEVPTSQGSMAFQQTPLSRRLMRHGENNMAAFILLESSPVMLAPWHS 129
+ ++ + LK K V T G ++ T LS + +L W
Sbjct: 61 ELLLDICVSLKLLK-VETRGGKAFYRNTELSSDYLTTVSPTSQCSMLKYMGRTSYRCWGH 119
Query: 130 LGTRVLANGTSAFDKAHG-------KDVWSYAAADAAHSKLINDAMACDTRLAMRAIIEG 182
L V G + + + G ++ + + + + + R + A
Sbjct: 120 LADAV-REGRNQYLETFGVPAEELFTAIYRSEGERLQFMQALQEVWSVNGRSVLTA---- 174
Query: 183 CPEVFD--GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDLPHVVCVAEKCHG------V 234
FD + D+GG G + +P + FD+P VV A++ +
Sbjct: 175 ----FDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEEQI 230
Query: 235 EHVGGDMF-DGVPEADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKXXXXXXXXXXX 293
+ GD F D +PEAD I+ VLHDW D +C +L+ G
Sbjct: 231 DFQEGDFFKDPLPEADLYILARVLHDWADGKCSHLLERIYHTCKPGGG------ILVIES 284
Query: 294 XXXXNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQAGFSRYNITSIHAVQSLIEA 352
++ + L + M +G+ER+ + +L AGF + A+ I A
Sbjct: 285 LLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQFKKTGAIYDAILA 343
>pdb|1QZZ|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adensyl-L-Methionine (Sam)
pdb|1R00|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adensyl-L-Homocystein (Sah)
Length = 374
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 14/153 (9%)
Query: 134 VLANGTSAFDKAHGKDVWSYAAADAAHSKLINDAMACDTRLAMRAIIEGCPEVFD--GIE 191
V+ G A+ +G+ W +AD A + + M+CD LA E + +D +
Sbjct: 129 VVRTGRPAYAGRYGRPFWEDLSADVALADSFDALMSCDEDLAY----EAPADAYDWSAVR 184
Query: 192 TLVDIGGNDGTTLRTLTKAFPRIRGINFDLPHVVCVAEK-------CHGVEHVGGDMFDG 244
++D+GG +G L + P +RG +L A + V GD F
Sbjct: 185 HVLDVGGGNGGMLAAIALRAPHLRGTLVELAGPAERARRRFADAGLADRVTVAEGDFFKP 244
Query: 245 VP-EADAAIIKWVLHDWGDDECIKILKNCKEAI 276
+P AD ++ +VL +W D++ + IL+ C A+
Sbjct: 245 LPVTADVVLLSFVLLNWSDEDALTILRGCVRAL 277
>pdb|1TW2|A Chain A, Crystal Structure Of Carminomycin-4-O-Methyltransferase
(Dnrk) In Complex With S-Adenosyl-L-Homocystein (Sah)
And 4-Methoxy-E-Rhodomycin T (M-Et)
pdb|1TW2|B Chain B, Crystal Structure Of Carminomycin-4-O-Methyltransferase
(Dnrk) In Complex With S-Adenosyl-L-Homocystein (Sah)
And 4-Methoxy-E-Rhodomycin T (M-Et)
pdb|1TW3|A Chain A, Crystal Structure Of Carminomycin-4-o-methyltransferase
(dnrk) In Complex With S-adenosyl-l-homocystein (sah)
And 4-methoxy-e-rhodomycin T (m-et)
pdb|1TW3|B Chain B, Crystal Structure Of Carminomycin-4-o-methyltransferase
(dnrk) In Complex With S-adenosyl-l-homocystein (sah)
And 4-methoxy-e-rhodomycin T (m-et)
Length = 360
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 123/330 (37%), Gaps = 60/330 (18%)
Query: 33 VVKCAVELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKE------VP 86
VV+ A L + + + T+ LA+ P L R++R L+ + +E VP
Sbjct: 35 VVRTAATLRLVDHILAGAR--TVKALAARTDTRPEALLRLIRHLVAIGLLEEDAPGEFVP 92
Query: 87 TSQGSMAFQQTPLSRRLMRHGENNMAAFILLESSPVMLAPWHSLGTRV------------ 134
T G + P ++R WH L V
Sbjct: 93 TEVGELLADDHPAAQRA-----------------------WHDLTQAVARADISFTRLPD 129
Query: 135 -LANGTSAFDKAHGKDVWSYAAADAAHSKLINDAMACDTRLAMRAIIEGCPEVFDGIETL 193
+ G ++ +GK + A + +ACD +A A + + +
Sbjct: 130 AIRTGRPTYESIYGKPFYEDLAGRPDLRASFDSLLACDQDVAFDA--PAAAYDWTNVRHV 187
Query: 194 VDIGGNDGTTLRTLTKAFPRIRGINFDLPHVVCVAE---KCHG----VEHVGGDMFDGVP 246
+D+GG G + + P + ++ V A K G V+ V GD F+ +P
Sbjct: 188 LDVGGGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFEPLP 247
Query: 247 -EADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKXXXXXXXXXXXXXXXNKFKSVRL 305
+ADA I+ +VL +W D + ++IL C EA+ + G+ N F
Sbjct: 248 RKADAIILSFVLLNWPDHDAVRILTRCAEAL-EPGGR----ILIHERDDLHENSFNEQFT 302
Query: 306 MLDMVMMAHTNKGKERSLKEWDYVLRQAGF 335
LD+ M+ G R+ ++WD + AG
Sbjct: 303 ELDLRMLVFLG-GALRTREKWDGLAASAGL 331
>pdb|1XDS|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adenosyl-L-Methionine (Sam) And
11-Deoxy- Beta-Rhodomycin (Dbra)
pdb|1XDS|B Chain B, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adenosyl-L-Methionine (Sam) And
11-Deoxy- Beta-Rhodomycin (Dbra)
pdb|1XDU|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With Sinefungin (Sfg)
Length = 374
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 68/153 (44%), Gaps = 14/153 (9%)
Query: 134 VLANGTSAFDKAHGKDVWSYAAADAAHSKLINDAMACDTRLAMRAIIEGCPEVFD--GIE 191
V+ G A+ +G+ W +AD A + + +CD LA E + +D +
Sbjct: 129 VVRTGRPAYAGRYGRPFWEDLSADVALADSFDALXSCDEDLAY----EAPADAYDWSAVR 184
Query: 192 TLVDIGGNDGTTLRTLTKAFPRIRGINFDLPHVVCVAEK-------CHGVEHVGGDMFDG 244
++D+GG +G L + P +RG +L A + V GD F
Sbjct: 185 HVLDVGGGNGGXLAAIALRAPHLRGTLVELAGPAERARRRFADAGLADRVTVAEGDFFKP 244
Query: 245 VP-EADAAIIKWVLHDWGDDECIKILKNCKEAI 276
+P AD ++ +VL +W D++ + IL+ C A+
Sbjct: 245 LPVTADVVLLSFVLLNWSDEDALTILRGCVRAL 277
>pdb|3I53|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah)
pdb|3I53|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah)
pdb|3I58|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
2-Hydroxy-7-Methoxy-5-Methyl Naphthoic Acid (Na)
pdb|3I58|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
2-Hydroxy-7-Methoxy-5-Methyl Naphthoic Acid (Na)
pdb|3I5U|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosylmethionine (Sam) And 2-Hydroxy-5-Methyl
Naphthoic Acid (Mna)
pdb|3I5U|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosylmethionine (Sam) And 2-Hydroxy-5-Methyl
Naphthoic Acid (Mna)
pdb|3I64|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
1,4-Dihydroxy-2-Naphthoic Acid (Dhn)
pdb|3I64|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
1,4-Dihydroxy-2-Naphthoic Acid (Dhn)
Length = 332
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 40/99 (40%), Gaps = 11/99 (11%)
Query: 239 GDMFDGVPE-ADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKXXXXXXXXXXXXXXX 297
G FD +P A ++ VLHDW D + IL+ C EA G
Sbjct: 226 GSFFDPLPAGAGGYVLSAVLHDWDDLSAVAILRRCAEA--AGSGGVVLVIEAVAGDEHAG 283
Query: 298 NKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQAGFS 336
+D+ M+ + GKERSL E + QAG +
Sbjct: 284 TG-------MDLRMLTYFG-GKERSLAELGELAAQAGLA 314
>pdb|1X19|A Chain A, Crystal Structure Of Bchu Involved In Bacteriochlorophyll
C Biosynthesis
pdb|1X1A|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Methionine
pdb|1X1B|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Homocysteine
pdb|1X1C|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Homocysteine And Zn2+
pdb|1X1D|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Homocysteine And Zn-Bacteriopheophorbide D
Length = 359
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 101/266 (37%), Gaps = 40/266 (15%)
Query: 27 GFTNMAVVKCAVELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFL-----IHLKF 81
G + +K A+EL + + E P L LA+ P L+ ++ L I+L+
Sbjct: 41 GLIEFSCMKAAIELDLFSHMAE--GPKDLATLAADTGSVPPRLEMLLETLRQMRVINLED 98
Query: 82 FKEVPTSQGSMAFQQTPLSRRLMRHGENNMAAFILLESSPVMLAPWHSLGTRVLANGTSA 141
K T F TP L + AF LA +G G
Sbjct: 99 GKWSLTEFADYMFSPTPKEPNLHQTPVAKAMAF---------LADDFYMGLSQAVRGQKN 149
Query: 142 FDKAHGKDVWSYAAADAAHSKLINDAMACDTRLAMRAIIEGCPEVFDGIETLVDIGGNDG 201
F K Y + + + + A++ ++E DG++ ++D+GG G
Sbjct: 150 F-----KGQVPYPPVTREDNLYFEEIHRSNAKFAIQLLLEEAK--LDGVKKMIDVGGGIG 202
Query: 202 TTLRTLTKAFPRIRGINFDLPHVV----------CVAEKCHGVEHVGGDMF-DGVPEADA 250
+ K FP + +LP + VA++ G + D++ + PEADA
Sbjct: 203 DISAAMLKHFPELDSTILNLPGAIDLVNENAAEKGVADRMRG---IAVDIYKESYPEADA 259
Query: 251 AIIKWVLHDWGDDECIKILKNCKEAI 276
+ +L+ +++ I+ CK+A
Sbjct: 260 VLFCRILYS-ANEQLSTIM--CKKAF 282
>pdb|3MCZ|A Chain A, The Structure Of An O-Methyltransferase Family Protein
From Burkholderia Thailandensis.
pdb|3MCZ|B Chain B, The Structure Of An O-Methyltransferase Family Protein
From Burkholderia Thailandensis
Length = 352
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 60/149 (40%), Gaps = 13/149 (8%)
Query: 93 AFQQTPLSRRLMRHGENNMAAFI--LLESSPVMLAPWHSLGTRVLANGTSAFDKAHGKDV 150
AF+ T L+ R + A +I ++E + W LG + + AF +
Sbjct: 92 AFRNTALTERYL---TTTSADYIGPIVEHQYLQWDNWPRLGEILRSEKPLAFQQE----- 143
Query: 151 WSYAAADAAHSKLINDAMACDTRLAMRAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKA 210
S A D NDA ++ + + E VF T++D+ G GT L + +
Sbjct: 144 -SRFAHDTRARDAFNDAXVRLSQPXVDVVSELG--VFARARTVIDLAGGHGTYLAQVLRR 200
Query: 211 FPRIRGINFDLPHVVCVAEKCHGVEHVGG 239
P++ G +DLP A K +GG
Sbjct: 201 HPQLTGQIWDLPTTRDAARKTIHAHDLGG 229
>pdb|3GGD|A Chain A, Crystal Structure Of Sam-Dependent Methyltransferase
(Yp_325210.1) From Anabaena Variabilis Atcc 29413 At
2.11 A Resolution
Length = 245
Score = 31.2 bits (69), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 177 RAIIEGCPE---VFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDLPHVVCVAEKCHG 233
RA++ P +F+ L+D +GT + L++ FPR+ G++ + +A K +
Sbjct: 41 RAVVVDLPRFELLFNPELPLIDFACGNGTQTKFLSQFFPRVIGLDVS-KSALEIAAKENT 99
Query: 234 VEHVGGDMFDG-VPEADAAI 252
++ + DG VPE A I
Sbjct: 100 AANISYRLLDGLVPEQAAQI 119
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.135 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,778,090
Number of Sequences: 62578
Number of extensions: 381489
Number of successful extensions: 950
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 888
Number of HSP's gapped (non-prelim): 24
length of query: 354
length of database: 14,973,337
effective HSP length: 100
effective length of query: 254
effective length of database: 8,715,537
effective search space: 2213746398
effective search space used: 2213746398
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)